Your job contains 1 sequence.
>027172
MVYIHNSISVCNSIDQNMANCVNSSDAFNSKPRQNNHVYRNKKIPSSPNCLKTPACDRSR
FRSAAVDVVILIAVITACGFLLFPYIRVVSVKSVEVSAAVFYLVKEEVIGNPLIYSSIGV
SMSCVAIATWVALLCTSRKCGNPNCKGLKKAAEFDIQLETEECVKNKDSAKKGLFELPRD
HHRELQAELKKMAPPNGRAVLVFRARCGCSVGRLEVPGPKKQRKIKK
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 027172
(227 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2102112 - symbol:AT3G01170 species:3702 "Arabi... 618 2.4e-60 1
TAIR|locus:2150941 - symbol:AT5G15260 species:3702 "Arabi... 556 8.9e-54 1
TAIR|locus:2082430 - symbol:AT3G06180 species:3702 "Arabi... 271 1.4e-23 1
>TAIR|locus:2102112 [details] [associations]
symbol:AT3G01170 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR008195 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 PANTHER:PTHR10759
EMBL:BT012180 EMBL:AK175253 EMBL:AK229300 IPI:IPI00537822
RefSeq:NP_566133.1 UniGene:At.21822 EnsemblPlants:AT3G01170.1
GeneID:820469 KEGG:ath:AT3G01170 TAIR:At3g01170 eggNOG:NOG296377
HOGENOM:HOG000238391 InParanoid:Q6NLZ8 OMA:IAVITAC PhylomeDB:Q6NLZ8
ProtClustDB:CLSN2687961 ArrayExpress:Q6NLZ8 Genevestigator:Q6NLZ8
Uniprot:Q6NLZ8
Length = 215
Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
Identities = 128/229 (55%), Positives = 154/229 (67%)
Query: 1 MVYIHNSISVCNSIDQNMANCVNSSDAFNSKPRQNNHVYRNKKIPSSPNCLKTPACDRSR 60
MVY+H+SISVCNS+D + + +S P+ N RNK SSP C K P CD S+
Sbjct: 1 MVYLHSSISVCNSVDPMIMS--------HSSPKSRNT--RNKS-SSSPTCSKFPVCDGSQ 49
Query: 61 FRSXXXXXXXXXXXXXXCGFLLFPYIRXXXXXXXXXXXXXFYLVKEEVIGNPLIYSSIGV 120
S CGFL FPY++ LVK+E++ NP++Y S+ +
Sbjct: 50 --SAAIDVVILIAVITACGFLFFPYVKLITLKSIEVFSDLSLLVKQEILQNPIVYGSLAL 107
Query: 121 SMSCVAIATW-VALLCTSRKCGNPNCKGLKKAAEFDIQLETEECVKNKDSAKKGLFELPR 179
S+ C AI+TW V LLCT ++CG PNCKGL+KA EFDIQLETEECVK+ S K+G+FELPR
Sbjct: 108 SIFCAAISTWLVILLCTMQRCGKPNCKGLRKAVEFDIQLETEECVKSS-SNKRGMFELPR 166
Query: 180 DHHRELQAELKKMAPPNGRAVLVFRARCGCSVGRLEVPGPKKQ-RKIKK 227
HHREL+AELKKMAPPNGRAVLVFRARCGCSV RL V GPKKQ RKIKK
Sbjct: 167 VHHRELEAELKKMAPPNGRAVLVFRARCGCSVRRLVVSGPKKQQRKIKK 215
>TAIR|locus:2150941 [details] [associations]
symbol:AT5G15260 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR008195 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 PANTHER:PTHR10759
ProtClustDB:CLSN2687961 EMBL:AY072017 EMBL:AY122889 EMBL:AK228532
IPI:IPI00522775 RefSeq:NP_197030.2 UniGene:At.28272 IntAct:Q8VYH4
EnsemblPlants:AT5G15260.1 GeneID:831378 KEGG:ath:AT5G15260
TAIR:At5g15260 eggNOG:NOG318534 InParanoid:Q8VYH4 OMA:AWMIVIL
PhylomeDB:Q8VYH4 Genevestigator:Q8VYH4 Uniprot:Q8VYH4
Length = 234
Score = 556 (200.8 bits), Expect = 8.9e-54, P = 8.9e-54
Identities = 126/242 (52%), Positives = 156/242 (64%)
Query: 1 MVYIHNSISVCNSIDQNMANCVNSSDAFNSKPRQNNHVYRNKKIPSSPNCLK--TPACDR 58
MVY NSIS+ +DQ+ +S D F+ +Q+ N+K SS +C + CD
Sbjct: 1 MVYFQNSISL---VDQSPI-MAHSPD-FHHHSKQSRTSSSNRK-SSSSSCSSNFSVCCDG 54
Query: 59 SRFRSXXXXXXXXXXXXXXCGFLLFPYIRXXXXXXXXXXXXXFYLVKEEVIGNP--LIYS 116
SR S GFL+FPYI+ LVKEE++ NP ++Y
Sbjct: 55 SR--SAAIDVVILIAVITSSGFLIFPYIKFITIKSVEIFSELSCLVKEEILRNPDPIVYG 112
Query: 117 SIGVSMSCVAIATW--VALLCTSRKCGNPNCKGLKKA-AEFDIQLETEECVKNKDS---- 169
I +S+SC A++ W V LLC+ +CG PNCKGL+KA AEFDIQLETE+CVK+ +S
Sbjct: 113 LIALSISCTALSAWMIVILLCSRHRCGKPNCKGLRKANAEFDIQLETEDCVKSSNSGKSV 172
Query: 170 AKKGLFELPRDHHRELQAELKKMAPPNGRAVLVFRARCGCSVGRLEVPGPKKQ----RKI 225
+KKGLFELPRDHHREL+AELKKMAPPNGRAVLVFRA+CGCSVGRLEVPGPKKQ RK+
Sbjct: 173 SKKGLFELPRDHHRELEAELKKMAPPNGRAVLVFRAKCGCSVGRLEVPGPKKQQLQQRKV 232
Query: 226 KK 227
KK
Sbjct: 233 KK 234
>TAIR|locus:2082430 [details] [associations]
symbol:AT3G06180 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR008195
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 EMBL:AC018907 PANTHER:PTHR10759 HOGENOM:HOG000238391
ProtClustDB:CLSN2687961 EMBL:BT021988 EMBL:BT025029 IPI:IPI00541091
RefSeq:NP_187269.1 UniGene:At.40559 EnsemblPlants:AT3G06180.1
GeneID:819792 KEGG:ath:AT3G06180 TAIR:At3g06180 eggNOG:NOG285406
InParanoid:Q9M8K0 OMA:LLFRNRC PhylomeDB:Q9M8K0
Genevestigator:Q9M8K0 Uniprot:Q9M8K0
Length = 241
Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 61/111 (54%), Positives = 75/111 (67%)
Query: 126 AIATWVALLC--TSRKCGNPNCKGLKKAAEFDIQLETEECVKNKDSAKKGLFELPRDHHR 183
A ++ L C SRKC NP CKGLKKA EFD+QL+TEECVK+ A K + LP
Sbjct: 119 ASIAFLDLCCGPRSRKCRNPKCKGLKKAMEFDLQLQTEECVKS--GATKEIDRLPWKGGS 176
Query: 184 E-------LQAELKKMAPPNGRAVLVFRARCGCSVGRLEVPGPKKQRKIKK 227
E L+AEL++MAPPNGRAVL+FR+RCGC V +LE GPK+ R+ KK
Sbjct: 177 ESNPDYECLRAELRRMAPPNGRAVLLFRSRCGCPVAKLEGWGPKRGRRHKK 227
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.135 0.419 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 227 200 0.00087 111 3 11 22 0.45 32
31 0.45 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 3
No. of states in DFA: 606 (64 KB)
Total size of DFA: 177 KB (2102 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.05u 0.17s 19.22t Elapsed: 00:00:01
Total cpu time: 19.05u 0.17s 19.22t Elapsed: 00:00:01
Start: Fri May 10 03:05:31 2013 End: Fri May 10 03:05:32 2013