Query 027174
Match_columns 227
No_of_seqs 245 out of 1664
Neff 10.4
Searched_HMMs 46136
Date Fri Mar 29 06:04:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027174.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/027174hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2931 Differentiation-relate 99.9 9.3E-25 2E-29 164.4 18.4 194 1-198 125-324 (326)
2 PF03096 Ndr: Ndr family; Int 99.9 1.4E-23 3E-28 160.2 14.6 181 1-185 102-283 (283)
3 PLN02824 hydrolase, alpha/beta 99.9 1.9E-21 4.1E-26 154.0 14.9 171 1-180 105-293 (294)
4 PRK10349 carboxylesterase BioH 99.9 7.9E-21 1.7E-25 147.6 14.1 169 1-180 77-255 (256)
5 KOG4409 Predicted hydrolase/ac 99.8 2.1E-20 4.5E-25 144.8 12.2 176 1-180 163-363 (365)
6 PLN02679 hydrolase, alpha/beta 99.8 6.5E-20 1.4E-24 149.1 15.4 67 113-181 284-357 (360)
7 PRK07581 hypothetical protein; 99.8 6.4E-20 1.4E-24 148.1 14.4 68 112-181 266-336 (339)
8 TIGR01738 bioH putative pimelo 99.8 5.5E-20 1.2E-24 140.7 13.2 167 1-178 68-245 (245)
9 TIGR03343 biphenyl_bphD 2-hydr 99.8 6.5E-20 1.4E-24 144.2 13.4 168 1-179 104-281 (282)
10 PLN02965 Probable pheophorbida 99.8 6.2E-20 1.3E-24 142.5 12.8 65 116-182 188-254 (255)
11 PRK03592 haloalkane dehalogena 99.8 8.3E-20 1.8E-24 144.7 13.2 178 1-183 96-291 (295)
12 PRK06489 hypothetical protein; 99.8 2.4E-19 5.3E-24 145.8 15.8 176 2-182 158-358 (360)
13 TIGR02240 PHA_depoly_arom poly 99.8 4.3E-20 9.3E-25 145.0 10.5 168 1-182 94-267 (276)
14 PRK11126 2-succinyl-6-hydroxy- 99.8 6E-19 1.3E-23 135.7 16.1 170 1-180 69-241 (242)
15 PRK10673 acyl-CoA esterase; Pr 99.8 7.8E-19 1.7E-23 136.1 15.2 165 1-180 84-254 (255)
16 PLN02578 hydrolase 99.8 7.3E-19 1.6E-23 142.7 14.7 65 112-179 287-353 (354)
17 PRK08775 homoserine O-acetyltr 99.8 8.4E-19 1.8E-23 141.8 14.4 66 116-182 272-340 (343)
18 TIGR02427 protocat_pcaD 3-oxoa 99.8 6.9E-19 1.5E-23 135.0 12.8 168 1-179 82-251 (251)
19 PLN03087 BODYGUARD 1 domain co 99.8 4.9E-19 1.1E-23 146.9 12.6 61 118-180 415-478 (481)
20 KOG1454 Predicted hydrolase/ac 99.8 1.4E-19 3E-24 144.2 8.5 63 117-181 259-324 (326)
21 PRK00870 haloalkane dehalogena 99.8 4.7E-19 1E-23 140.9 10.1 64 116-181 234-301 (302)
22 PRK00175 metX homoserine O-ace 99.8 1.6E-18 3.5E-23 141.8 13.4 68 113-182 301-375 (379)
23 PRK06765 homoserine O-acetyltr 99.8 2.8E-18 6.1E-23 139.8 14.3 69 112-180 314-387 (389)
24 TIGR03695 menH_SHCHC 2-succiny 99.8 2.8E-18 6.1E-23 131.4 13.4 172 1-179 73-251 (251)
25 TIGR01392 homoserO_Ac_trn homo 99.8 2.1E-18 4.5E-23 139.9 12.1 65 113-179 280-351 (351)
26 TIGR03611 RutD pyrimidine util 99.8 5.8E-18 1.3E-22 130.7 13.6 171 1-179 83-256 (257)
27 PLN02385 hydrolase; alpha/beta 99.8 6E-19 1.3E-23 143.0 8.1 69 114-182 272-346 (349)
28 PRK03204 haloalkane dehalogena 99.8 2.3E-18 5E-23 135.8 11.1 56 121-178 227-285 (286)
29 TIGR03056 bchO_mg_che_rel puta 99.8 1E-17 2.2E-22 131.2 14.2 63 115-179 214-278 (278)
30 KOG4178 Soluble epoxide hydrol 99.8 6.1E-18 1.3E-22 130.6 12.4 180 1-182 116-321 (322)
31 PLN02894 hydrolase, alpha/beta 99.8 2.6E-17 5.6E-22 135.4 16.5 69 112-181 316-385 (402)
32 TIGR01250 pro_imino_pep_2 prol 99.8 2E-17 4.4E-22 129.6 15.2 65 113-179 223-288 (288)
33 PHA02857 monoglyceride lipase; 99.8 3E-18 6.6E-23 134.5 8.9 166 1-181 100-273 (276)
34 PLN02980 2-oxoglutarate decarb 99.8 1.7E-17 3.6E-22 155.7 15.1 180 1-182 1448-1640(1655)
35 PF12697 Abhydrolase_6: Alpha/ 99.7 3.1E-18 6.8E-23 129.3 7.1 154 1-173 69-228 (228)
36 PRK10749 lysophospholipase L2; 99.7 1.4E-17 3.1E-22 133.9 9.9 67 115-181 253-329 (330)
37 PLN03084 alpha/beta hydrolase 99.7 2E-16 4.2E-21 128.9 15.7 60 118-180 322-383 (383)
38 PLN02298 hydrolase, alpha/beta 99.7 6.7E-17 1.5E-21 130.1 8.7 67 115-181 245-317 (330)
39 PF00561 Abhydrolase_1: alpha/ 99.7 4E-17 8.6E-22 124.1 6.7 59 115-175 169-229 (230)
40 PLN02211 methyl indole-3-aceta 99.7 6E-16 1.3E-20 121.2 13.1 62 117-181 206-270 (273)
41 PRK14875 acetoin dehydrogenase 99.7 7.3E-16 1.6E-20 125.9 14.0 166 1-180 200-370 (371)
42 KOG2382 Predicted alpha/beta h 99.7 1.7E-15 3.8E-20 117.2 14.3 170 1-181 126-313 (315)
43 COG2267 PldB Lysophospholipase 99.6 2.7E-15 5.9E-20 118.4 11.6 176 1-181 110-294 (298)
44 KOG2984 Predicted hydrolase [G 99.6 4.2E-16 9E-21 112.0 5.3 157 2-181 118-276 (277)
45 PLN02511 hydrolase 99.6 9.6E-15 2.1E-19 119.8 11.9 69 112-182 289-366 (388)
46 PLN02652 hydrolase; alpha/beta 99.6 4.1E-15 8.9E-20 121.8 9.6 67 115-181 318-387 (395)
47 KOG1455 Lysophospholipase [Lip 99.6 2.6E-15 5.7E-20 114.7 6.5 169 2-181 133-312 (313)
48 TIGR01249 pro_imino_pep_1 prol 99.6 6.5E-14 1.4E-18 111.6 12.3 60 116-180 242-304 (306)
49 COG1647 Esterase/lipase [Gener 99.5 2.5E-13 5.3E-18 99.3 11.8 152 2-180 89-243 (243)
50 TIGR01607 PST-A Plasmodium sub 99.5 2.1E-13 4.5E-18 109.8 10.2 59 121-179 270-331 (332)
51 PRK10985 putative hydrolase; P 99.5 6.9E-13 1.5E-17 106.5 10.8 167 1-181 134-320 (324)
52 TIGR03100 hydr1_PEP hydrolase, 99.4 7.6E-13 1.6E-17 103.8 10.6 66 115-180 201-274 (274)
53 TIGR01836 PHA_synth_III_C poly 99.4 5.4E-12 1.2E-16 102.5 14.6 64 116-180 281-349 (350)
54 COG0596 MhpC Predicted hydrola 99.4 3.3E-12 7.2E-17 97.9 11.6 63 115-179 215-280 (282)
55 PRK05077 frsA fermentation/res 99.4 9.8E-12 2.1E-16 102.7 14.1 140 2-181 269-412 (414)
56 PRK05855 short chain dehydroge 99.4 2.8E-12 6E-17 110.7 9.4 63 117-182 229-293 (582)
57 PRK07868 acyl-CoA synthetase; 99.3 5E-11 1.1E-15 108.7 15.7 66 116-183 292-363 (994)
58 TIGR01838 PHA_synth_I poly(R)- 99.3 7.7E-11 1.7E-15 99.4 13.4 53 115-169 409-463 (532)
59 COG2021 MET2 Homoserine acetyl 99.3 1.5E-10 3.4E-15 91.3 12.8 175 2-180 151-367 (368)
60 COG3208 GrsT Predicted thioest 99.2 1.7E-10 3.6E-15 86.2 11.6 152 2-180 78-235 (244)
61 PF00326 Peptidase_S9: Prolyl 99.2 8.5E-10 1.8E-14 83.3 13.8 135 2-181 68-209 (213)
62 PLN02872 triacylglycerol lipas 99.2 4E-10 8.6E-15 92.4 12.7 63 117-181 319-389 (395)
63 KOG2564 Predicted acetyltransf 99.1 4.3E-11 9.3E-16 90.6 3.1 177 1-187 149-333 (343)
64 PRK10566 esterase; Provisional 99.1 2.6E-09 5.7E-14 82.5 11.8 60 117-180 181-247 (249)
65 PRK13604 luxD acyl transferase 99.0 8.3E-10 1.8E-14 86.6 7.4 50 117-167 198-249 (307)
66 PRK11071 esterase YqiA; Provis 99.0 2.7E-09 5.8E-14 79.1 9.2 53 120-179 135-189 (190)
67 PF12695 Abhydrolase_5: Alpha/ 98.9 2.1E-09 4.6E-14 75.8 5.9 80 1-161 64-145 (145)
68 PRK11460 putative hydrolase; P 98.9 1.6E-08 3.5E-13 77.4 9.2 58 121-178 148-209 (232)
69 PLN02442 S-formylglutathione h 98.9 3.6E-08 7.9E-13 77.7 11.0 34 1-34 146-179 (283)
70 KOG1552 Predicted alpha/beta h 98.8 4.2E-09 9.1E-14 79.4 4.6 118 1-181 133-252 (258)
71 KOG4667 Predicted esterase [Li 98.7 4.7E-08 1E-12 71.6 7.4 57 120-179 198-256 (269)
72 TIGR01849 PHB_depoly_PhaZ poly 98.7 6.8E-07 1.5E-11 73.1 13.2 65 116-180 332-405 (406)
73 PF06821 Ser_hydrolase: Serine 98.6 4.6E-07 1E-11 65.8 9.0 102 1-170 58-162 (171)
74 KOG1838 Alpha/beta hydrolase [ 98.6 1E-06 2.3E-11 71.2 11.4 173 2-181 202-388 (409)
75 PF06342 DUF1057: Alpha/beta h 98.5 2E-06 4.3E-11 66.1 11.5 160 1-178 107-296 (297)
76 PF00975 Thioesterase: Thioest 98.5 4.8E-06 1E-10 63.4 13.6 56 121-178 168-229 (229)
77 TIGR02821 fghA_ester_D S-formy 98.5 1.6E-06 3.5E-11 68.2 10.5 34 1-34 141-174 (275)
78 PF05728 UPF0227: Uncharacteri 98.5 2.2E-06 4.9E-11 63.0 9.6 54 120-178 133-186 (187)
79 COG0429 Predicted hydrolase of 98.4 1.2E-06 2.5E-11 68.7 8.3 70 112-181 265-340 (345)
80 KOG4391 Predicted alpha/beta h 98.4 1.4E-07 2.9E-12 69.4 2.9 132 1-184 152-285 (300)
81 PF08538 DUF1749: Protein of u 98.4 2.2E-07 4.7E-12 72.5 4.2 168 1-179 111-303 (303)
82 TIGR01839 PHA_synth_II poly(R) 98.4 4.9E-06 1.1E-10 70.4 12.3 48 116-165 436-485 (560)
83 PF02230 Abhydrolase_2: Phosph 98.4 1.7E-06 3.6E-11 65.5 8.5 103 1-180 108-214 (216)
84 PF08840 BAAT_C: BAAT / Acyl-C 98.4 1.1E-07 2.4E-12 71.8 1.6 32 2-34 26-57 (213)
85 COG1506 DAP2 Dipeptidyl aminop 98.4 2.6E-06 5.7E-11 74.3 9.5 65 117-181 547-616 (620)
86 PRK10162 acetyl esterase; Prov 98.3 8.5E-06 1.8E-10 65.4 11.1 60 122-181 249-315 (318)
87 PF01738 DLH: Dienelactone hyd 98.3 3.3E-06 7.2E-11 64.0 7.8 63 118-180 142-216 (218)
88 PF10230 DUF2305: Uncharacteri 98.1 9.5E-05 2.1E-09 57.8 12.8 34 1-34 87-123 (266)
89 PF09752 DUF2048: Uncharacteri 98.1 2.6E-05 5.7E-10 62.0 9.3 54 123-179 291-347 (348)
90 PLN00021 chlorophyllase 98.1 2.6E-05 5.6E-10 62.4 9.2 34 1-34 129-167 (313)
91 TIGR03101 hydr2_PEP hydrolase, 98.0 9.2E-06 2E-10 63.3 4.9 34 1-34 102-135 (266)
92 PF06500 DUF1100: Alpha/beta h 97.9 0.00025 5.4E-09 58.0 11.3 140 2-180 265-408 (411)
93 PF05448 AXE1: Acetyl xylan es 97.9 0.00033 7.3E-09 56.1 11.9 65 112-180 253-319 (320)
94 COG3243 PhaC Poly(3-hydroxyalk 97.9 0.0001 2.3E-09 59.8 8.8 33 2-34 185-218 (445)
95 PF07859 Abhydrolase_3: alpha/ 97.9 6.8E-05 1.5E-09 56.3 7.4 42 122-163 167-210 (211)
96 COG3571 Predicted hydrolase of 97.8 0.00015 3.4E-09 51.1 7.9 109 1-181 92-211 (213)
97 PF08386 Abhydrolase_4: TAP-li 97.8 7.9E-05 1.7E-09 49.4 6.3 59 121-181 34-94 (103)
98 cd00707 Pancreat_lipase_like P 97.8 1.6E-05 3.6E-10 62.4 3.5 34 1-34 115-148 (275)
99 PRK05371 x-prolyl-dipeptidyl a 97.8 0.00021 4.5E-09 63.9 10.6 67 114-181 448-519 (767)
100 COG0400 Predicted esterase [Ge 97.8 0.00012 2.7E-09 54.7 7.2 100 1-181 102-205 (207)
101 PF03959 FSH1: Serine hydrolas 97.7 8.9E-05 1.9E-09 56.0 6.3 48 118-167 158-207 (212)
102 TIGR03230 lipo_lipase lipoprot 97.7 3.8E-05 8.2E-10 63.8 4.0 34 1-34 122-155 (442)
103 COG3545 Predicted esterase of 97.7 0.00016 3.5E-09 51.7 6.3 112 1-180 62-178 (181)
104 COG0412 Dienelactone hydrolase 97.5 0.0011 2.4E-08 50.9 9.7 64 118-181 155-233 (236)
105 PF07819 PGAP1: PGAP1-like pro 97.5 0.00018 3.9E-09 54.8 5.3 36 1-36 88-126 (225)
106 KOG1515 Arylacetamide deacetyl 97.5 0.00081 1.7E-08 54.1 9.0 62 120-181 266-335 (336)
107 PRK04940 hypothetical protein; 97.5 0.0078 1.7E-07 43.8 12.7 32 1-35 63-94 (180)
108 TIGR00976 /NonD putative hydro 97.4 0.0017 3.7E-08 56.2 10.8 33 2-34 101-133 (550)
109 COG3319 Thioesterase domains o 97.4 0.001 2.3E-08 51.4 8.1 34 1-34 68-104 (257)
110 TIGR01840 esterase_phb esteras 97.4 0.00015 3.3E-09 54.6 3.2 34 1-34 98-131 (212)
111 PLN02733 phosphatidylcholine-s 97.3 0.00018 3.9E-09 60.0 3.1 34 1-34 165-202 (440)
112 PF00756 Esterase: Putative es 97.3 0.00021 4.6E-09 55.2 3.2 35 1-35 118-152 (251)
113 PRK10252 entF enterobactin syn 97.3 0.0012 2.7E-08 62.7 8.8 34 1-34 1136-1172(1296)
114 PRK10115 protease 2; Provision 97.2 0.0057 1.2E-07 54.3 11.5 33 2-34 528-560 (686)
115 PF11339 DUF3141: Protein of u 97.2 0.0061 1.3E-07 51.1 10.8 33 1-33 143-175 (581)
116 smart00824 PKS_TE Thioesterase 97.2 0.0051 1.1E-07 45.6 9.5 34 1-34 67-103 (212)
117 KOG1551 Uncharacterized conser 97.1 0.014 3.1E-07 44.8 11.1 56 124-182 309-367 (371)
118 PF10142 PhoPQ_related: PhoPQ- 97.0 0.012 2.5E-07 48.0 10.5 60 118-181 259-320 (367)
119 PF06028 DUF915: Alpha/beta hy 96.9 0.0011 2.3E-08 51.4 3.9 33 2-34 107-144 (255)
120 PF04301 DUF452: Protein of un 96.9 0.017 3.6E-07 43.4 10.0 32 1-34 60-91 (213)
121 KOG2551 Phospholipase/carboxyh 96.9 0.0035 7.5E-08 46.8 6.2 59 117-180 159-219 (230)
122 COG4757 Predicted alpha/beta h 96.9 0.0012 2.6E-08 49.6 3.7 62 115-178 210-280 (281)
123 cd00741 Lipase Lipase. Lipase 96.9 0.00097 2.1E-08 47.5 3.0 34 1-34 31-68 (153)
124 PF06057 VirJ: Bacterial virul 96.8 0.0074 1.6E-07 44.2 7.1 52 122-180 140-191 (192)
125 PRK10439 enterobactin/ferric e 96.8 0.0012 2.6E-08 54.9 3.3 33 1-33 291-323 (411)
126 KOG2624 Triglyceride lipase-ch 96.7 0.033 7.1E-07 46.1 10.8 63 117-181 328-398 (403)
127 COG2819 Predicted hydrolase of 96.5 0.0018 3.9E-08 49.8 2.6 33 2-34 141-173 (264)
128 COG0657 Aes Esterase/lipase [L 96.5 0.027 5.9E-07 45.1 9.5 46 121-166 245-292 (312)
129 PF02450 LCAT: Lecithin:choles 96.3 0.003 6.4E-08 52.3 2.7 34 1-34 122-161 (389)
130 COG2945 Predicted hydrolase of 96.2 0.015 3.2E-07 42.6 5.6 59 117-179 145-205 (210)
131 PTZ00472 serine carboxypeptida 96.2 0.013 2.8E-07 49.6 6.1 33 149-181 427-459 (462)
132 KOG2100 Dipeptidyl aminopeptid 96.2 0.028 6.1E-07 50.5 8.4 62 119-180 679-746 (755)
133 KOG2565 Predicted hydrolases o 96.2 0.067 1.5E-06 43.3 9.6 63 118-182 401-464 (469)
134 PF11187 DUF2974: Protein of u 96.2 0.0061 1.3E-07 46.3 3.7 34 1-34 87-124 (224)
135 KOG3724 Negative regulator of 95.9 0.004 8.7E-08 54.5 1.9 33 1-33 185-220 (973)
136 cd00519 Lipase_3 Lipase (class 95.9 0.0055 1.2E-07 46.8 2.4 33 1-33 131-168 (229)
137 PF02129 Peptidase_S15: X-Pro 95.9 0.024 5.1E-07 44.5 5.9 33 2-34 105-137 (272)
138 KOG3975 Uncharacterized conser 95.8 0.035 7.5E-07 42.4 6.1 60 118-178 239-300 (301)
139 PF01764 Lipase_3: Lipase (cla 95.8 0.0055 1.2E-07 42.7 1.9 19 1-19 67-85 (140)
140 COG0627 Predicted esterase [Ge 95.8 0.0057 1.2E-07 48.9 2.0 35 2-36 156-190 (316)
141 PF10503 Esterase_phd: Esteras 95.7 0.014 3.1E-07 44.2 3.7 33 2-34 101-133 (220)
142 KOG3043 Predicted hydrolase re 95.6 0.033 7.2E-07 41.8 5.3 65 116-180 159-239 (242)
143 PF12740 Chlorophyllase2: Chlo 95.5 0.012 2.5E-07 45.5 2.7 32 2-33 95-131 (259)
144 PF03403 PAF-AH_p_II: Platelet 95.5 0.016 3.4E-07 47.8 3.5 33 1-34 231-263 (379)
145 PF00450 Peptidase_S10: Serine 95.4 0.023 5.1E-07 47.2 4.5 59 121-179 330-414 (415)
146 PF00151 Lipase: Lipase; Inte 95.3 0.021 4.5E-07 46.2 3.8 33 2-34 154-188 (331)
147 PF02273 Acyl_transf_2: Acyl t 95.2 0.24 5.1E-06 38.0 8.7 51 117-168 191-243 (294)
148 COG1073 Hydrolases of the alph 95.1 0.08 1.7E-06 41.4 6.5 66 116-181 226-297 (299)
149 COG1075 LipA Predicted acetylt 95.0 0.018 3.8E-07 46.7 2.6 33 2-34 131-165 (336)
150 PF06259 Abhydrolase_8: Alpha/ 95.0 0.027 5.8E-07 41.1 3.2 34 1-34 112-145 (177)
151 COG2382 Fes Enterochelin ester 95.0 0.015 3.3E-07 45.5 2.0 34 1-34 180-213 (299)
152 COG3458 Acetyl esterase (deace 94.9 0.16 3.5E-06 39.4 7.1 66 112-181 250-317 (321)
153 PLN02213 sinapoylglucose-malat 94.8 0.13 2.9E-06 41.4 7.0 60 121-181 233-317 (319)
154 PLN02454 triacylglycerol lipas 94.2 0.05 1.1E-06 44.9 3.4 18 1-18 231-248 (414)
155 PF07224 Chlorophyllase: Chlor 94.2 0.035 7.6E-07 42.7 2.3 34 2-35 124-159 (307)
156 PLN02162 triacylglycerol lipas 94.1 0.053 1.1E-06 45.3 3.3 17 1-17 281-297 (475)
157 PF05705 DUF829: Eukaryotic pr 94.0 0.086 1.9E-06 40.5 4.3 60 119-178 176-240 (240)
158 PLN02571 triacylglycerol lipas 93.9 0.058 1.3E-06 44.6 3.2 18 1-18 229-246 (413)
159 KOG4840 Predicted hydrolases o 93.9 0.029 6.3E-07 42.1 1.3 34 1-34 110-145 (299)
160 PF05057 DUF676: Putative seri 93.8 0.061 1.3E-06 40.8 2.9 17 1-17 81-97 (217)
161 KOG2281 Dipeptidyl aminopeptid 93.7 0.31 6.8E-06 42.4 7.2 63 118-180 799-866 (867)
162 PLN02209 serine carboxypeptida 93.7 0.27 5.9E-06 41.4 6.8 60 121-181 351-435 (437)
163 PLN03016 sinapoylglucose-malat 93.6 0.32 6.9E-06 40.9 7.0 60 121-181 347-431 (433)
164 PF03583 LIP: Secretory lipase 93.6 1.6 3.5E-05 34.6 10.7 45 119-163 217-266 (290)
165 PLN00413 triacylglycerol lipas 93.5 0.082 1.8E-06 44.3 3.4 17 1-17 287-303 (479)
166 COG4814 Uncharacterized protei 93.4 0.063 1.4E-06 41.1 2.4 33 2-34 140-177 (288)
167 KOG1553 Predicted alpha/beta h 93.4 0.044 9.5E-07 43.9 1.5 32 1-33 314-345 (517)
168 COG4099 Predicted peptidase [G 93.2 0.061 1.3E-06 42.2 2.1 33 2-34 273-305 (387)
169 KOG1282 Serine carboxypeptidas 93.2 0.35 7.6E-06 40.7 6.6 63 122-184 364-451 (454)
170 PF06850 PHB_depo_C: PHB de-po 92.7 0.18 4E-06 37.1 3.8 60 121-180 134-201 (202)
171 KOG3253 Predicted alpha/beta h 92.5 0.51 1.1E-05 40.8 6.7 50 115-165 298-349 (784)
172 PF01674 Lipase_2: Lipase (cla 92.3 0.16 3.5E-06 38.5 3.3 18 2-19 79-96 (219)
173 COG4287 PqaA PhoPQ-activated p 92.1 2.4 5.2E-05 34.7 9.6 65 118-187 326-393 (507)
174 PLN02324 triacylglycerol lipas 92.1 0.16 3.5E-06 42.0 3.3 17 2-18 219-235 (415)
175 PLN02310 triacylglycerol lipas 92.1 0.089 1.9E-06 43.4 1.8 18 1-18 212-229 (405)
176 PLN02408 phospholipase A1 91.9 0.09 1.9E-06 42.8 1.6 19 1-19 203-221 (365)
177 KOG3847 Phospholipase A2 (plat 91.8 0.092 2E-06 41.5 1.5 33 1-34 244-276 (399)
178 PF12715 Abhydrolase_7: Abhydr 91.4 0.25 5.4E-06 40.4 3.6 30 2-32 230-259 (390)
179 PLN02847 triacylglycerol lipas 91.4 0.11 2.5E-06 44.7 1.7 18 1-18 254-271 (633)
180 PF11144 DUF2920: Protein of u 91.2 0.17 3.6E-06 41.6 2.5 34 1-34 187-220 (403)
181 PF05990 DUF900: Alpha/beta hy 91.1 0.24 5.2E-06 38.0 3.2 34 2-35 97-139 (233)
182 PF05577 Peptidase_S28: Serine 90.8 0.29 6.2E-06 41.2 3.7 34 1-34 116-149 (434)
183 PLN02934 triacylglycerol lipas 90.8 0.13 2.8E-06 43.5 1.5 17 1-17 324-340 (515)
184 PF05277 DUF726: Protein of un 90.8 0.25 5.5E-06 40.0 3.1 40 1-41 223-267 (345)
185 PLN02719 triacylglycerol lipas 90.7 0.19 4.2E-06 42.6 2.5 18 1-18 301-318 (518)
186 PLN03037 lipase class 3 family 90.7 0.15 3.3E-06 43.2 1.8 18 1-18 321-338 (525)
187 PLN02761 lipase class 3 family 90.2 0.17 3.7E-06 42.9 1.8 18 1-18 297-314 (527)
188 PLN02753 triacylglycerol lipas 90.2 0.17 3.8E-06 42.9 1.8 18 1-18 315-332 (531)
189 PLN02802 triacylglycerol lipas 90.2 0.17 3.8E-06 42.8 1.8 19 1-19 333-351 (509)
190 PF12048 DUF3530: Protein of u 90.1 0.36 7.9E-06 38.7 3.4 34 1-34 196-230 (310)
191 KOG2369 Lecithin:cholesterol a 89.7 0.16 3.5E-06 42.4 1.2 32 1-32 185-224 (473)
192 PLN02517 phosphatidylcholine-s 89.6 0.15 3.3E-06 44.0 1.1 34 1-34 216-264 (642)
193 PF07082 DUF1350: Protein of u 88.9 0.36 7.8E-06 37.1 2.5 30 2-31 94-123 (250)
194 PF01083 Cutinase: Cutinase; 88.8 0.32 6.9E-06 35.7 2.1 34 1-34 84-123 (179)
195 KOG3101 Esterase D [General fu 88.8 0.033 7.1E-07 41.5 -3.0 30 2-31 145-174 (283)
196 COG2945 Predicted hydrolase of 87.9 0.57 1.2E-05 34.5 2.9 30 2-32 107-136 (210)
197 KOG4627 Kynurenine formamidase 86.9 0.53 1.1E-05 35.2 2.2 48 117-166 203-252 (270)
198 KOG2183 Prolylcarboxypeptidase 86.9 0.26 5.5E-06 40.6 0.7 31 1-31 170-200 (492)
199 COG2936 Predicted acyl esteras 85.7 5.5 0.00012 34.6 8.0 32 3-34 129-160 (563)
200 TIGR03502 lipase_Pla1_cef extr 85.5 1 2.2E-05 40.8 3.7 18 2-19 559-576 (792)
201 PLN02633 palmitoyl protein thi 85.3 1.1 2.4E-05 35.7 3.5 32 2-33 98-131 (314)
202 PF05576 Peptidase_S37: PS-10 85.0 1.2 2.6E-05 36.9 3.6 57 121-179 351-412 (448)
203 KOG4569 Predicted lipase [Lipi 84.6 0.6 1.3E-05 37.9 1.8 17 2-18 175-191 (336)
204 PLN02606 palmitoyl-protein thi 83.9 1.5 3.2E-05 34.9 3.6 32 2-33 99-132 (306)
205 COG4553 DepA Poly-beta-hydroxy 83.2 19 0.00042 28.7 9.2 61 121-183 339-409 (415)
206 PF07519 Tannase: Tannase and 83.0 0.74 1.6E-05 39.3 1.8 61 121-181 353-427 (474)
207 COG4947 Uncharacterized protei 83.0 0.5 1.1E-05 34.2 0.6 34 1-34 104-137 (227)
208 COG1770 PtrB Protease II [Amin 81.6 26 0.00057 31.1 10.3 33 2-34 531-563 (682)
209 PF11288 DUF3089: Protein of u 81.5 0.98 2.1E-05 33.9 1.7 19 1-19 98-116 (207)
210 COG3509 LpqC Poly(3-hydroxybut 81.2 1.6 3.5E-05 34.4 2.9 32 2-33 148-179 (312)
211 KOG3967 Uncharacterized conser 79.8 2.1 4.5E-05 32.3 2.9 33 2-34 194-228 (297)
212 COG2830 Uncharacterized protei 79.5 7.6 0.00016 27.9 5.4 29 2-32 61-89 (214)
213 KOG2112 Lysophospholipase [Lip 78.7 1.7 3.6E-05 32.4 2.1 55 121-180 144-203 (206)
214 PF02089 Palm_thioest: Palmito 78.7 2.8 6E-05 33.0 3.4 32 2-33 84-116 (279)
215 PF05677 DUF818: Chlamydia CHL 77.4 1.4 3.1E-05 35.5 1.6 19 1-19 218-236 (365)
216 KOG4627 Kynurenine formamidase 77.4 0.7 1.5E-05 34.5 -0.1 33 2-34 140-173 (270)
217 PTZ00472 serine carboxypeptida 76.3 2.3 4.9E-05 36.3 2.6 34 1-34 174-217 (462)
218 COG4188 Predicted dienelactone 75.0 2 4.4E-05 35.0 1.9 56 115-170 245-303 (365)
219 KOG2112 Lysophospholipase [Lip 72.8 6.4 0.00014 29.4 3.9 17 167-183 159-175 (206)
220 COG5153 CVT17 Putative lipase 70.9 2.1 4.6E-05 33.7 1.1 19 2-20 280-298 (425)
221 KOG4540 Putative lipase essent 70.9 2.1 4.6E-05 33.7 1.1 19 2-20 280-298 (425)
222 COG4782 Uncharacterized protei 70.4 3.1 6.8E-05 33.9 1.9 17 2-18 195-211 (377)
223 KOG1202 Animal-type fatty acid 65.9 77 0.0017 31.0 9.7 33 2-34 2186-2220(2376)
224 PF10605 3HBOH: 3HB-oligomer h 64.1 80 0.0017 28.1 9.0 34 1-34 288-322 (690)
225 PF08237 PE-PPE: PE-PPE domain 61.8 5.3 0.00012 30.5 1.7 19 1-19 51-69 (225)
226 KOG2029 Uncharacterized conser 60.7 8.4 0.00018 33.7 2.7 39 3-41 531-580 (697)
227 COG4188 Predicted dienelactone 60.6 3.9 8.5E-05 33.4 0.8 20 2-21 163-182 (365)
228 PF07519 Tannase: Tannase and 60.0 44 0.00095 28.8 7.0 32 3-34 120-151 (474)
229 cd00312 Esterase_lipase Estera 59.9 3.1 6.7E-05 35.6 0.1 34 1-34 179-214 (493)
230 COG3150 Predicted esterase [Ge 55.8 9.2 0.0002 27.8 1.9 31 2-35 63-93 (191)
231 cd07212 Pat_PNPLA9 Patatin-lik 55.2 7.5 0.00016 31.3 1.6 19 1-19 35-53 (312)
232 KOG2541 Palmitoyl protein thio 54.1 31 0.00068 27.1 4.6 33 1-33 95-128 (296)
233 PF10340 DUF2424: Protein of u 53.9 13 0.00028 30.8 2.7 55 122-179 303-364 (374)
234 cd07207 Pat_ExoU_VipD_like Exo 50.8 11 0.00023 27.7 1.7 18 1-18 30-47 (194)
235 COG2939 Carboxypeptidase C (ca 47.3 31 0.00068 29.6 4.0 33 151-183 461-493 (498)
236 PF00135 COesterase: Carboxyle 47.0 24 0.00051 30.4 3.5 34 1-34 211-246 (535)
237 cd07225 Pat_PNPLA6_PNPLA7 Pata 46.9 13 0.00027 29.9 1.6 20 1-20 46-65 (306)
238 cd07198 Patatin Patatin-like p 44.5 14 0.00031 26.6 1.5 19 1-19 29-47 (172)
239 cd07209 Pat_hypo_Ecoli_Z1214_l 43.7 15 0.00032 27.7 1.6 21 1-21 29-49 (215)
240 cd07208 Pat_hypo_Ecoli_yjju_li 42.8 17 0.00037 28.3 1.8 22 1-22 30-51 (266)
241 KOG3253 Predicted alpha/beta h 42.7 5 0.00011 35.1 -1.2 31 1-31 253-284 (784)
242 cd07227 Pat_Fungal_NTE1 Fungal 42.1 17 0.00036 28.7 1.6 19 1-19 41-59 (269)
243 cd07228 Pat_NTE_like_bacteria 40.1 16 0.00034 26.5 1.1 20 1-20 31-50 (175)
244 PRK10279 hypothetical protein; 39.7 18 0.0004 28.9 1.6 20 1-20 36-55 (300)
245 PF08187 Tetradecapep: Myoacti 39.3 12 0.00026 14.5 0.2 7 219-225 7-13 (14)
246 PF05577 Peptidase_S28: Serine 38.0 39 0.00084 28.5 3.4 40 122-164 377-416 (434)
247 TIGR00128 fabD malonyl CoA-acy 37.5 20 0.00044 28.1 1.5 18 1-18 86-103 (290)
248 PF00698 Acyl_transf_1: Acyl t 37.3 17 0.00037 29.2 1.0 16 1-16 87-102 (318)
249 cd07210 Pat_hypo_W_succinogene 36.7 22 0.00048 26.9 1.6 19 2-20 32-50 (221)
250 cd07217 Pat17_PNPLA8_PNPLA9_li 35.8 24 0.00051 28.9 1.6 18 1-18 44-61 (344)
251 PF06500 DUF1100: Alpha/beta h 35.5 93 0.002 26.3 5.0 66 120-185 188-259 (411)
252 TIGR02069 cyanophycinase cyano 35.4 1.8E+02 0.0039 22.6 6.4 54 125-183 2-57 (250)
253 smart00827 PKS_AT Acyl transfe 35.4 24 0.00052 27.9 1.6 17 1-17 85-101 (298)
254 PF06289 FlbD: Flagellar prote 35.3 61 0.0013 19.0 2.9 33 148-181 26-58 (60)
255 KOG2385 Uncharacterized conser 35.2 47 0.001 28.8 3.2 35 1-35 450-489 (633)
256 cd07211 Pat_PNPLA8 Patatin-lik 32.2 27 0.00058 28.0 1.4 17 1-17 44-60 (308)
257 cd07230 Pat_TGL4-5_like Triacy 32.0 19 0.00041 30.4 0.6 23 1-23 104-126 (421)
258 cd07213 Pat17_PNPLA8_PNPLA9_li 31.6 29 0.00064 27.5 1.6 19 1-19 37-55 (288)
259 TIGR03131 malonate_mdcH malona 31.2 33 0.00073 27.1 1.8 16 2-17 80-95 (295)
260 PF03403 PAF-AH_p_II: Platelet 31.0 72 0.0016 26.5 3.8 49 117-165 270-319 (379)
261 cd07205 Pat_PNPLA6_PNPLA7_NTE1 30.8 32 0.0007 24.7 1.6 19 1-19 31-49 (175)
262 COG1752 RssA Predicted esteras 30.8 32 0.00069 27.5 1.7 21 1-21 42-62 (306)
263 PF01734 Patatin: Patatin-like 30.5 29 0.00064 24.8 1.3 19 1-19 30-48 (204)
264 PLN02752 [acyl-carrier protein 29.8 34 0.00074 27.8 1.7 15 2-16 128-142 (343)
265 cd07232 Pat_PLPL Patain-like p 29.8 21 0.00046 29.9 0.5 26 1-26 98-123 (407)
266 PF06028 DUF915: Alpha/beta hy 29.8 1.1E+02 0.0023 24.0 4.3 58 121-179 184-253 (255)
267 KOG3363 Uncharacterized conser 29.7 83 0.0018 22.7 3.3 45 136-185 99-143 (196)
268 KOG2237 Predicted serine prote 29.2 16 0.00034 32.3 -0.3 32 2-33 553-584 (712)
269 KOG2182 Hydrolytic enzymes of 28.2 42 0.00091 28.8 1.9 34 1-34 175-208 (514)
270 PHA02911 C-type lectin-like pr 27.7 36 0.00078 25.4 1.3 17 195-211 85-101 (213)
271 cd07224 Pat_like Patatin-like 26.9 47 0.001 25.4 1.9 19 2-20 33-51 (233)
272 PF10913 DUF2706: Protein of u 26.1 90 0.002 17.6 2.4 26 196-221 28-56 (60)
273 cd07218 Pat_iPLA2 Calcium-inde 25.5 54 0.0012 25.4 2.0 18 2-19 34-51 (245)
274 cd07204 Pat_PNPLA_like Patatin 25.3 53 0.0012 25.3 1.9 19 2-20 35-53 (243)
275 cd07229 Pat_TGL3_like Triacylg 24.6 34 0.00073 28.6 0.8 26 1-26 114-139 (391)
276 COG2272 PnbA Carboxylesterase 24.2 74 0.0016 27.4 2.7 34 1-34 183-218 (491)
277 PF08513 LisH: LisH; InterPro 24.1 96 0.0021 14.6 2.3 17 168-184 1-17 (27)
278 KOG2214 Predicted esterase of 24.0 26 0.00056 30.1 0.0 27 1-27 205-231 (543)
279 cd07216 Pat17_PNPLA8_PNPLA9_li 23.9 43 0.00094 26.8 1.3 16 1-16 45-60 (309)
280 smart00667 LisH Lissencephaly 23.9 98 0.0021 14.7 2.3 19 166-184 2-20 (34)
281 cd07206 Pat_TGL3-4-5_SDP1 Tria 22.9 45 0.00097 26.7 1.1 23 1-23 100-122 (298)
282 cd07199 Pat17_PNPLA8_PNPLA9_li 22.8 54 0.0012 25.4 1.6 18 1-18 37-54 (258)
283 PF00976 ACTH_domain: Corticot 22.7 39 0.00085 17.6 0.5 10 211-220 13-22 (39)
284 TIGR03607 patatin-related prot 22.7 52 0.0011 30.0 1.6 17 1-17 69-85 (739)
285 KOG4372 Predicted alpha/beta h 22.5 19 0.00041 29.9 -1.0 14 2-15 154-167 (405)
286 PHA02595 tk.4 hypothetical pro 22.1 60 0.0013 23.1 1.5 18 5-22 29-46 (154)
287 PF01090 Ribosomal_S19e: Ribos 21.7 1.2E+02 0.0027 21.2 2.9 23 166-188 7-29 (139)
288 TIGR02816 pfaB_fam PfaB family 21.6 61 0.0013 28.4 1.8 18 2-19 269-286 (538)
289 COG3946 VirJ Type IV secretory 21.6 2.5E+02 0.0055 23.8 5.1 51 123-180 398-448 (456)
290 PF05570 DUF765: Circovirus pr 21.5 58 0.0013 15.3 0.9 24 189-212 3-26 (29)
291 cd07231 Pat_SDP1-like Sugar-De 21.4 38 0.00081 27.4 0.4 24 1-24 99-122 (323)
292 cd07221 Pat_PNPLA3 Patatin-lik 21.3 73 0.0016 24.8 2.0 19 2-20 36-54 (252)
293 PTZ00095 40S ribosomal protein 20.6 2.1E+02 0.0046 20.8 4.0 27 162-188 28-54 (169)
294 cd08769 DAP_dppA_2 Peptidase M 20.2 3.4E+02 0.0074 21.5 5.5 56 118-179 144-201 (270)
No 1
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.94 E-value=9.3e-25 Score=164.44 Aligned_cols=194 Identities=46% Similarity=0.723 Sum_probs=175.2
Q ss_pred CceecchhHHHHHHHHHhcCCccceEEEecCCCCCCchhHHHHHHHhHHHHHhhccchhHHHHHHHHhhchhhcCCCCCC
Q 027174 1 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVP 80 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (227)
|++|...|+.|-.+||..||++|.||||+++.+..++|.+|.+.+.....++..++...+.+.++.+.|+.+....
T Consensus 125 Ig~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~gwiew~~~K~~s~~l~~~Gmt~~~~d~ll~H~Fg~e~~~~---- 200 (326)
T KOG2931|consen 125 IGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKGWIEWAYNKVSSNLLYYYGMTQGVKDYLLAHHFGKEELGN---- 200 (326)
T ss_pred EEecccccHHHHHHHHhcChhheeEEEEEecCCCCchHHHHHHHHHHHHHHHhhchhhhHHHHHHHHHhccccccc----
Confidence 6789999999999999999999999999999999999999999988888888899999999999999999888765
Q ss_pred ChHHHHHHHHHhcc-cCchhHHHHHHHhcCCCCCccccC----cccccEEEEecCCCcccchHHHHHhhhcCCCcEEEEe
Q 027174 81 ESDIVQACRRLLDE-RQSSNVWHFLEAINGRPDISEGLR----KLQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEV 155 (227)
Q Consensus 81 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~----~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i 155 (227)
+.++++.|++.+.. .++.++..++.++..|.|+..... +++||++++.|+..+.++...++..++++.+..+..+
T Consensus 201 ~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~~r~~~~~tlkc~vllvvGd~Sp~~~~vv~~n~~Ldp~~ttllk~ 280 (326)
T KOG2931|consen 201 NSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDLSIERPKLGTTLKCPVLLVVGDNSPHVSAVVECNSKLDPTYTTLLKM 280 (326)
T ss_pred cHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCccccCCCcCccccccEEEEecCCCchhhhhhhhhcccCcccceEEEE
Confidence 89999999999976 477999999999999999876544 4559999999999999999999999998888999999
Q ss_pred cCCCCCCCccChHHHHHHHHHHHhhCCcccCCC-CCCCCCCCCC
Q 027174 156 QACGSMVTEEQPHAMLIPMEYFLMGYGLYRPTL-SVSPRSPLSP 198 (227)
Q Consensus 156 ~~~gH~~~~e~p~~~~~~i~~fl~~~~~~~~~~-~~~~~~~~~~ 198 (227)
.+||-.+..|+|.++++.+.=|++..|+.++.. +-.+||++++
T Consensus 281 ~d~g~l~~e~qP~kl~ea~~~FlqG~Gy~~s~~~~~~~Rsr~~s 324 (326)
T KOG2931|consen 281 ADCGGLVQEEQPGKLAEAFKYFLQGMGYLPSASMTRLPRSRTSS 324 (326)
T ss_pred cccCCcccccCchHHHHHHHHHHccCCcccccccccCcccccCC
Confidence 999999999999999999999999999998765 4556776654
No 2
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.91 E-value=1.4e-23 Score=160.17 Aligned_cols=181 Identities=45% Similarity=0.744 Sum_probs=142.8
Q ss_pred CceecchhHHHHHHHHHhcCCccceEEEecCCCCCCchhHHHHHHHhHHHHHhhccchhHHHHHHHHhhchhhcCCCCCC
Q 027174 1 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVP 80 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (227)
|++|...||.|-.+||.+||++|.|+||+++.....+|.+|.+.+.....++..++.....+.++.++|+......
T Consensus 102 Ig~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw~Ew~~~K~~~~~L~~~gmt~~~~d~Ll~h~Fg~~~~~~---- 177 (283)
T PF03096_consen 102 IGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGWMEWFYQKLSSWLLYSYGMTSSVKDYLLWHYFGKEEEEN---- 177 (283)
T ss_dssp EEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---HHHHHHHHHH-------CTTS-HHHHHHHHHS-HHHHHC----
T ss_pred EEEeeccchhhhhhccccCccceeEEEEEecCCCCccHHHHHHHHHhcccccccccccchHHhhhhcccccccccc----
Confidence 6789999999999999999999999999999999999999998888878888889999999999999999887654
Q ss_pred ChHHHHHHHHHhcc-cCchhHHHHHHHhcCCCCCccccCcccccEEEEecCCCcccchHHHHHhhhcCCCcEEEEecCCC
Q 027174 81 ESDIVQACRRLLDE-RQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACG 159 (227)
Q Consensus 81 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~g 159 (227)
+.|+++.|++.+.. .++.++..+++++..|.|+...+....||+|++.|+.++..+.+.++..++++.++++..+++||
T Consensus 178 n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvvG~~Sp~~~~vv~~ns~Ldp~~ttllkv~dcG 257 (283)
T PF03096_consen 178 NSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSLGCPVLLVVGDNSPHVDDVVEMNSKLDPTKTTLLKVADCG 257 (283)
T ss_dssp T-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTCCS-EEEEEETTSTTHHHHHHHHHHS-CCCEEEEEETT-T
T ss_pred cHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCCCCCeEEEEecCCcchhhHHHHHhhcCcccceEEEecccC
Confidence 88999999999866 57899999999999999999988999999999999999999888999999988888999999999
Q ss_pred CCCCccChHHHHHHHHHHHhhCCccc
Q 027174 160 SMVTEEQPHAMLIPMEYFLMGYGLYR 185 (227)
Q Consensus 160 H~~~~e~p~~~~~~i~~fl~~~~~~~ 185 (227)
=++..|+|+++++.++=|+++.|+.+
T Consensus 258 glV~eEqP~klaea~~lFlQG~G~~~ 283 (283)
T PF03096_consen 258 GLVLEEQPGKLAEAFKLFLQGMGYLP 283 (283)
T ss_dssp T-HHHH-HHHHHHHHHHHHHHTTB--
T ss_pred CcccccCcHHHHHHHHHHHccCCcCC
Confidence 99999999999999999999998763
No 3
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.88 E-value=1.9e-21 Score=154.01 Aligned_cols=171 Identities=19% Similarity=0.201 Sum_probs=98.4
Q ss_pred CceecchhHHHHHHHHHhcCCccceEEEecCCCCCC---chhHHH--HHHHhHHHHHhhcc---------chhHHHHHHH
Q 027174 1 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAP---SWTEWL--YNKVMSNLLYYYGM---------CGVVKELLLK 66 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~~~---~~~~~~--~~~~~~~~~~~~~~---------~~~~~~~~~~ 66 (227)
+++||||||.+|+.+|.++|++|+++|++++..... ...... ........+..... ........+.
T Consensus 105 ~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (294)
T PLN02824 105 FVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRETAVGKAFFKSVATPETVKNILC 184 (294)
T ss_pred EEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHHHHHhchhHHHHHHHhhcCHHHHHHHHH
Confidence 589999999999999999999999999999765321 000000 00000010000000 0000011111
Q ss_pred HhhchhhcCCCCCCChHHHHHHHHHhcccCchhHHHHHHHh--cCCCCCccccCcccccEEEEecCCCcccc--hHHHHH
Q 027174 67 RYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAI--NGRPDISEGLRKLQCRSLIFVGESSPFHS--EAVHMT 142 (227)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~i~~Pvlii~G~~D~~~~--~~~~~~ 142 (227)
..+.... ..+++..+.+......... ...+.... .......+.+.++++|+++|+|++|.+++ .++.+.
T Consensus 185 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~ 257 (294)
T PLN02824 185 QCYHDDS-----AVTDELVEAILRPGLEPGA--VDVFLDFISYSGGPLPEELLPAVKCPVLIAWGEKDPWEPVELGRAYA 257 (294)
T ss_pred HhccChh-----hccHHHHHHHHhccCCchH--HHHHHHHhccccccchHHHHhhcCCCeEEEEecCCCCCChHHHHHHH
Confidence 1111110 0033333333221111111 11111111 11112234578899999999999999883 455566
Q ss_pred hhhcCCCcEEEEecCCCCCCCccChHHHHHHHHHHHhh
Q 027174 143 SKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 180 (227)
Q Consensus 143 ~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 180 (227)
+.. +++++++++++||++++|+|++|++.|.+|+++
T Consensus 258 ~~~--~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (294)
T PLN02824 258 NFD--AVEDFIVLPGVGHCPQDEAPELVNPLIESFVAR 293 (294)
T ss_pred hcC--CccceEEeCCCCCChhhhCHHHHHHHHHHHHhc
Confidence 666 778999999999999999999999999999976
No 4
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.86 E-value=7.9e-21 Score=147.55 Aligned_cols=169 Identities=12% Similarity=0.073 Sum_probs=100.3
Q ss_pred CceecchhHHHHHHHHHhcCCccceEEEecCCCCCCc---hhHHH--HHHHhHHHHHhhccchhHHHHHHHHhhchhhcC
Q 027174 1 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPS---WTEWL--YNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRG 75 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~~~~---~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (227)
++|||||||.+|+.+|.++|++|+++|++++.+.... +.... ........+. ...... ...++......
T Consensus 77 ~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~~~ 150 (256)
T PRK10349 77 IWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLS-DDFQRT-----VERFLALQTMG 150 (256)
T ss_pred EEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHH-hchHHH-----HHHHHHHHHcc
Confidence 4799999999999999999999999999998654211 11110 0000111110 001111 11111111100
Q ss_pred CCCCCChHHHHHHHHHhcccCc---hhHHHHHHHhcCCCCCccccCcccccEEEEecCCCccc--chHHHHHhhhcCCCc
Q 027174 76 NAQVPESDIVQACRRLLDERQS---SNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYS 150 (227)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~--~~~~~~~~~~~~~~~ 150 (227)
. .. .......+......... ......... ....+..+.+.++++|+++++|++|.++ +.+..+.+.+ +++
T Consensus 151 ~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i--~~~ 225 (256)
T PRK10349 151 T-ET-ARQDARALKKTVLALPMPEVDVLNGGLEI-LKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLW--PHS 225 (256)
T ss_pred C-ch-HHHHHHHHHHHhhccCCCcHHHHHHHHHH-HHhCccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhC--CCC
Confidence 0 00 11111122221111111 111111111 2234566678899999999999999987 3445577888 899
Q ss_pred EEEEecCCCCCCCccChHHHHHHHHHHHhh
Q 027174 151 ALVEVQACGSMVTEEQPHAMLIPMEYFLMG 180 (227)
Q Consensus 151 ~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 180 (227)
++++++++||++++|+|++|++.+.+|-++
T Consensus 226 ~~~~i~~~gH~~~~e~p~~f~~~l~~~~~~ 255 (256)
T PRK10349 226 ESYIFAKAAHAPFISHPAEFCHLLVALKQR 255 (256)
T ss_pred eEEEeCCCCCCccccCHHHHHHHHHHHhcc
Confidence 999999999999999999999999999764
No 5
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.84 E-value=2.1e-20 Score=144.81 Aligned_cols=176 Identities=20% Similarity=0.253 Sum_probs=99.2
Q ss_pred CceecchhHHHHHHHHHhcCCccceEEEecCCCCCCch----------hHHHHHH-H------hHHHHHhh-ccchhHHH
Q 027174 1 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSW----------TEWLYNK-V------MSNLLYYY-GMCGVVKE 62 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~~~~~----------~~~~~~~-~------~~~~~~~~-~~~~~~~~ 62 (227)
||+||||||.+|..||.+||++|+.|||++|....... ..|.... . ....++.. .+..
T Consensus 163 ilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~~~~~~~nPl~~LR~~Gp~Gp---- 238 (365)
T KOG4409|consen 163 ILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKALFLVATNFNPLALLRLMGPLGP---- 238 (365)
T ss_pred eEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCChHHHhhhhhhhhcCCHHHHHHhccccch----
Confidence 79999999999999999999999999999998764321 1221000 0 00011100 0111
Q ss_pred HHHHHhhchhhcCCCCCCChHHHHHHHHHhcccCc---hhHHHHHHHh-cCCCCCccccCccc--ccEEEEecCCCccc-
Q 027174 63 LLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQS---SNVWHFLEAI-NGRPDISEGLRKLQ--CRSLIFVGESSPFH- 135 (227)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~l~~i~--~Pvlii~G~~D~~~- 135 (227)
.+...+.............++.+-.|.-......+ ..+....... ..+..+.+.+..++ ||+++|+|++|.+-
T Consensus 239 ~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~Pm~~r~~~l~~~~pv~fiyG~~dWmD~ 318 (365)
T KOG4409|consen 239 KLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARRPMIQRLRELKKDVPVTFIYGDRDWMDK 318 (365)
T ss_pred HHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhhhhHHHHHHhhccCCCEEEEecCcccccc
Confidence 11112211111110001133332333222222221 2222222211 11122223344444 99999999999986
Q ss_pred chHHHHHhhhcCCCcEEEEecCCCCCCCccChHHHHHHHHHHHhh
Q 027174 136 SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 180 (227)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 180 (227)
.....+...+....++.++++++||++.+|+|+.|++.+.+++++
T Consensus 319 ~~g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~~~~ 363 (365)
T KOG4409|consen 319 NAGLEVTKSLMKEYVEIIIVPGAGHHVYLDNPEFFNQIVLEECDK 363 (365)
T ss_pred hhHHHHHHHhhcccceEEEecCCCceeecCCHHHHHHHHHHHHhc
Confidence 444445554332568999999999999999999999999999975
No 6
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.84 E-value=6.5e-20 Score=149.07 Aligned_cols=67 Identities=13% Similarity=0.254 Sum_probs=56.6
Q ss_pred CccccCcccccEEEEecCCCcccchH-------HHHHhhhcCCCcEEEEecCCCCCCCccChHHHHHHHHHHHhhC
Q 027174 113 ISEGLRKLQCRSLIFVGESSPFHSEA-------VHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 181 (227)
Q Consensus 113 ~~~~l~~i~~Pvlii~G~~D~~~~~~-------~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 181 (227)
....+.++++|+|+++|++|.+++.. ..+.+.+ +++++++++++||++++|+|++|++.|.+||++.
T Consensus 284 ~~~~l~~i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~i--p~~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~~~ 357 (360)
T PLN02679 284 PIKLIPRISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQL--PNVTLYVLEGVGHCPHDDRPDLVHEKLLPWLAQL 357 (360)
T ss_pred HHHHhhhcCCCEEEEEeCCCCCcCchhhHHHHHHhhhccC--CceEEEEcCCCCCCccccCHHHHHHHHHHHHHhc
Confidence 33557889999999999999987422 2355667 8899999999999999999999999999999874
No 7
>PRK07581 hypothetical protein; Validated
Probab=99.84 E-value=6.4e-20 Score=148.14 Aligned_cols=68 Identities=12% Similarity=0.183 Sum_probs=59.8
Q ss_pred CCccccCcccccEEEEecCCCcccc--hHHHHHhhhcCCCcEEEEecC-CCCCCCccChHHHHHHHHHHHhhC
Q 027174 112 DISEGLRKLQCRSLIFVGESSPFHS--EAVHMTSKIDRRYSALVEVQA-CGSMVTEEQPHAMLIPMEYFLMGY 181 (227)
Q Consensus 112 ~~~~~l~~i~~Pvlii~G~~D~~~~--~~~~~~~~~~~~~~~~~~i~~-~gH~~~~e~p~~~~~~i~~fl~~~ 181 (227)
+..+.+.++++|+|+|+|++|.+++ .+..+.+.+ ++++++++++ +||++++|+|+.++..|.+|+++.
T Consensus 266 d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~i--p~a~l~~i~~~~GH~~~~~~~~~~~~~~~~~~~~~ 336 (339)
T PRK07581 266 DLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALI--PNAELRPIESIWGHLAGFGQNPADIAFIDAALKEL 336 (339)
T ss_pred CHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhC--CCCeEEEeCCCCCccccccCcHHHHHHHHHHHHHH
Confidence 4455688899999999999999883 455678888 8899999999 999999999999999999999874
No 8
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.84 E-value=5.5e-20 Score=140.72 Aligned_cols=167 Identities=14% Similarity=0.085 Sum_probs=98.5
Q ss_pred CceecchhHHHHHHHHHhcCCccceEEEecCCCCCCchhHHH------HHHHhHHHHHhhccchhHHHHHHHHhhchhhc
Q 027174 1 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWL------YNKVMSNLLYYYGMCGVVKELLLKRYFSKEVR 74 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (227)
+++||||||.+++.+|.++|++|.++|++++.+.......+. ....+...+. ...............+....
T Consensus 68 ~lvG~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~- 145 (245)
T TIGR01738 68 IWLGWSLGGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLS-DDYQRTIERFLALQTLGTPT- 145 (245)
T ss_pred EEEEEcHHHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhh-hhHHHHHHHHHHHHHhcCCc-
Confidence 479999999999999999999999999998876421111110 0000000000 00000111111001111100
Q ss_pred CCCCCCChHHHHHHHHHhcccC---chhHHHHHHHhcCCCCCccccCcccccEEEEecCCCcccc--hHHHHHhhhcCCC
Q 027174 75 GNAQVPESDIVQACRRLLDERQ---SSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS--EAVHMTSKIDRRY 149 (227)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~--~~~~~~~~~~~~~ 149 (227)
..+....+........ ...+...... ....+....+.++++|+++++|++|.+++ ..+.+.+.+ ++
T Consensus 146 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~--~~ 216 (245)
T TIGR01738 146 ------ARQDARALKQTLLARPTPNVQVLQAGLEI-LATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLA--PH 216 (245)
T ss_pred ------cchHHHHHHHHhhccCCCCHHHHHHHHHH-hhcccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhC--CC
Confidence 1111222222221111 1122222222 22334455678899999999999999883 445577778 88
Q ss_pred cEEEEecCCCCCCCccChHHHHHHHHHHH
Q 027174 150 SALVEVQACGSMVTEEQPHAMLIPMEYFL 178 (227)
Q Consensus 150 ~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 178 (227)
+++++++++||++++|+|++|++.|.+|+
T Consensus 217 ~~~~~~~~~gH~~~~e~p~~~~~~i~~fi 245 (245)
T TIGR01738 217 SELYIFAKAAHAPFLSHAEAFCALLVAFK 245 (245)
T ss_pred CeEEEeCCCCCCccccCHHHHHHHHHhhC
Confidence 99999999999999999999999999985
No 9
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.83 E-value=6.5e-20 Score=144.23 Aligned_cols=168 Identities=20% Similarity=0.240 Sum_probs=98.3
Q ss_pred CceecchhHHHHHHHHHhcCCccceEEEecCCCCCCch----hHHHHHHHhHHHHHhhccchhHHHHHHHHhhchhhcCC
Q 027174 1 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSW----TEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGN 76 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (227)
+++||||||.+++.+|.++|++|+++|++++....... .... ........ ...........+....+.+..
T Consensus 104 ~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--- 178 (282)
T TIGR03343 104 HLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEG-IKLLFKLY-AEPSYETLKQMLNVFLFDQSL--- 178 (282)
T ss_pred eEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHH-HHHHHHHh-cCCCHHHHHHHHhhCccCccc---
Confidence 47999999999999999999999999999975431110 0000 00001100 001111111111001111110
Q ss_pred CCCCChHHHHHHHHHhcccCchhHHHHHHHh----cCCCCCccccCcccccEEEEecCCCccc--chHHHHHhhhcCCCc
Q 027174 77 AQVPESDIVQACRRLLDERQSSNVWHFLEAI----NGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYS 150 (227)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~i~~Pvlii~G~~D~~~--~~~~~~~~~~~~~~~ 150 (227)
.+.+..+........ .......+.... ....+....+.++++|+++++|++|.++ +.+..+.+.+ |++
T Consensus 179 ---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~~--~~~ 252 (282)
T TIGR03343 179 ---ITEELLQGRWENIQR-QPEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHGLKLLWNM--PDA 252 (282)
T ss_pred ---CcHHHHHhHHHHhhc-CHHHHHHHHHhccccccccchHHHHHhhCCCCEEEEEccCCCcCCchhHHHHHHhC--CCC
Confidence 022222221111111 111111111110 1112233457889999999999999987 4566688888 899
Q ss_pred EEEEecCCCCCCCccChHHHHHHHHHHHh
Q 027174 151 ALVEVQACGSMVTEEQPHAMLIPMEYFLM 179 (227)
Q Consensus 151 ~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 179 (227)
++++++++||+++.|+|++|++.|.+|++
T Consensus 253 ~~~~i~~agH~~~~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 253 QLHVFSRCGHWAQWEHADAFNRLVIDFLR 281 (282)
T ss_pred EEEEeCCCCcCCcccCHHHHHHHHHHHhh
Confidence 99999999999999999999999999995
No 10
>PLN02965 Probable pheophorbidase
Probab=99.83 E-value=6.2e-20 Score=142.52 Aligned_cols=65 Identities=3% Similarity=-0.067 Sum_probs=57.6
Q ss_pred ccCcccccEEEEecCCCcccc--hHHHHHhhhcCCCcEEEEecCCCCCCCccChHHHHHHHHHHHhhCC
Q 027174 116 GLRKLQCRSLIFVGESSPFHS--EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYG 182 (227)
Q Consensus 116 ~l~~i~~Pvlii~G~~D~~~~--~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 182 (227)
.+..+++|+++++|++|..++ ..+.+.+.+ ++++++++++|||++++|+|++|++.|.+|+++..
T Consensus 188 ~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~--~~a~~~~i~~~GH~~~~e~p~~v~~~l~~~~~~~~ 254 (255)
T PLN02965 188 NPEAEKVPRVYIKTAKDNLFDPVRQDVMVENW--PPAQTYVLEDSDHSAFFSVPTTLFQYLLQAVSSLQ 254 (255)
T ss_pred hhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhC--CcceEEEecCCCCchhhcCHHHHHHHHHHHHHHhc
Confidence 456789999999999999883 456688889 88999999999999999999999999999998753
No 11
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.83 E-value=8.3e-20 Score=144.70 Aligned_cols=178 Identities=12% Similarity=0.155 Sum_probs=99.7
Q ss_pred CceecchhHHHHHHHHHhcCCccceEEEecCCCCCCchhHHHH-HHHhHHHHHhhccch-hH--HHHHHHHhhchhhcCC
Q 027174 1 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLY-NKVMSNLLYYYGMCG-VV--KELLLKRYFSKEVRGN 76 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~ 76 (227)
+++||||||.+|+.+|.++|++|+++|++++......+..+.. .......+....... .. ...+....+......
T Consensus 96 ~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 174 (295)
T PRK03592 96 VLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPAVRELFQALRSPGEGEEMVLEENVFIERVLPGSILR- 174 (295)
T ss_pred EEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchhHHHHHHHHhCcccccccccchhhHHhhcccCcccc-
Confidence 4799999999999999999999999999998543322211100 001111111101000 00 001111111111000
Q ss_pred CCCCChHHHHHHHHHhccc-CchhHHHHHHHhc----------CCCCCccccCcccccEEEEecCCCccc-c-hHHHH-H
Q 027174 77 AQVPESDIVQACRRLLDER-QSSNVWHFLEAIN----------GRPDISEGLRKLQCRSLIFVGESSPFH-S-EAVHM-T 142 (227)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~----------~~~~~~~~l~~i~~Pvlii~G~~D~~~-~-~~~~~-~ 142 (227)
...++..+.+...+... .......+..... ...+..+.+.++++|+++|+|++|.++ + ....+ .
T Consensus 175 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~ 252 (295)
T PRK03592 175 --PLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVPKLLINAEPGAILTTGAIRDWCR 252 (295)
T ss_pred --cCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCCeEEEeccCCcccCcHHHHHHHH
Confidence 01233333333222111 1111111111100 001123446789999999999999988 4 33333 4
Q ss_pred hhhcCCCcEEEEecCCCCCCCccChHHHHHHHHHHHhhCCc
Q 027174 143 SKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGL 183 (227)
Q Consensus 143 ~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~~ 183 (227)
+.. +++++++++++||++++|+|++|++.|.+|+++...
T Consensus 253 ~~~--~~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~~~~ 291 (295)
T PRK03592 253 SWP--NQLEITVFGAGLHFAQEDSPEEIGAAIAAWLRRLRL 291 (295)
T ss_pred Hhh--hhcceeeccCcchhhhhcCHHHHHHHHHHHHHHhcc
Confidence 456 789999999999999999999999999999988654
No 12
>PRK06489 hypothetical protein; Provisional
Probab=99.83 E-value=2.4e-19 Score=145.83 Aligned_cols=176 Identities=13% Similarity=0.133 Sum_probs=100.0
Q ss_pred ceecchhHHHHHHHHHhcCCccceEEEecCCCCCCchhHHHHHHHhHHHHHhh-cc-----ch---hHHHHH-HHHhhch
Q 027174 2 CMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYY-GM-----CG---VVKELL-LKRYFSK 71 (227)
Q Consensus 2 lvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~---~~~~~~-~~~~~~~ 71 (227)
++||||||.+|+.+|.+||++|+++|++++.+.......+............. .+ .. ...... ...++..
T Consensus 158 lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (360)
T PRK06489 158 ILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTEMSGRNWMWRRMLIESIRNDPAWNNGNYTTQPPSLKRANPMFAIATS 237 (360)
T ss_pred EEEECHHHHHHHHHHHhCchhhheeeeeccCcccccHHHHHHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHh
Confidence 79999999999999999999999999999865322211211111111111100 00 00 001100 0000000
Q ss_pred h---hcCCCCCCChHHHH-HHHHHhc---ccCchhHHHHHHHhcCCCCCccccCcccccEEEEecCCCcccchH----HH
Q 027174 72 E---VRGNAQVPESDIVQ-ACRRLLD---ERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHSEA----VH 140 (227)
Q Consensus 72 ~---~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~----~~ 140 (227)
. .... ......... .+..... ......+...... ....+..+.+.+|++|+|+|+|++|.+++.. +.
T Consensus 238 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~ 315 (360)
T PRK06489 238 GGTLAYQA-QAPTRAAADKLVDERLAAPVTADANDFLYQWDS-SRDYNPSPDLEKIKAPVLAINSADDERNPPETGVMEA 315 (360)
T ss_pred CCHHHHHH-hcCChHHHHHHHHHHHHhhhhcCHHHHHHHHHH-hhccChHHHHHhCCCCEEEEecCCCcccChhhHHHHH
Confidence 0 0000 000111111 1111111 1111222212221 2234556678899999999999999988432 55
Q ss_pred HHhhhcCCCcEEEEecCC----CCCCCccChHHHHHHHHHHHhhCC
Q 027174 141 MTSKIDRRYSALVEVQAC----GSMVTEEQPHAMLIPMEYFLMGYG 182 (227)
Q Consensus 141 ~~~~~~~~~~~~~~i~~~----gH~~~~e~p~~~~~~i~~fl~~~~ 182 (227)
+.+.+ |+++++++++| ||+++ |+|++|++.|.+|+++..
T Consensus 316 la~~i--p~a~l~~i~~a~~~~GH~~~-e~P~~~~~~i~~FL~~~~ 358 (360)
T PRK06489 316 ALKRV--KHGRLVLIPASPETRGHGTT-GSAKFWKAYLAEFLAQVP 358 (360)
T ss_pred HHHhC--cCCeEEEECCCCCCCCcccc-cCHHHHHHHHHHHHHhcc
Confidence 88888 89999999996 99997 899999999999998753
No 13
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.83 E-value=4.3e-20 Score=145.02 Aligned_cols=168 Identities=17% Similarity=0.199 Sum_probs=99.6
Q ss_pred CceecchhHHHHHHHHHhcCCccceEEEecCCCCCCc---hhHHHHHHHhHHHHHhhccchhHHHHHHHHhhchhhcCCC
Q 027174 1 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPS---WTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNA 77 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (227)
++|||||||.+|+.+|.++|++|++||++++...... ............... ..... .. ....++......
T Consensus 94 ~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~-~~~~~~~~~~~~-- 167 (276)
T TIGR02240 94 NAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVLMMMASPRRYI-QPSHG--IH-IAPDIYGGAFRR-- 167 (276)
T ss_pred EEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchhHHHHhcCchhhh-ccccc--cc-hhhhhccceeec--
Confidence 4899999999999999999999999999998765221 111100000000000 00000 00 011111111100
Q ss_pred CCCChHHHHHHHHHhcccCchhH-HHHHHHhcCCCCCccccCcccccEEEEecCCCcccc--hHHHHHhhhcCCCcEEEE
Q 027174 78 QVPESDIVQACRRLLDERQSSNV-WHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS--EAVHMTSKIDRRYSALVE 154 (227)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~--~~~~~~~~~~~~~~~~~~ 154 (227)
+++..+.+............ ...... . ..+..+.+.++++|+++++|++|++++ ..+.+.+.+ +++++++
T Consensus 168 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~~~~--~~~~~~~ 240 (276)
T TIGR02240 168 ---DPELAMAHASKVRSGGKLGYYWQLFAG-L-GWTSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLAWRI--PNAELHI 240 (276)
T ss_pred ---cchhhhhhhhhcccCCCchHHHHHHHH-c-CCchhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHHHhC--CCCEEEE
Confidence 22222222222211111111 111111 1 122234578999999999999999884 456688888 8899999
Q ss_pred ecCCCCCCCccChHHHHHHHHHHHhhCC
Q 027174 155 VQACGSMVTEEQPHAMLIPMEYFLMGYG 182 (227)
Q Consensus 155 i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 182 (227)
+++ ||++++|+|++|++.|.+|+++..
T Consensus 241 i~~-gH~~~~e~p~~~~~~i~~fl~~~~ 267 (276)
T TIGR02240 241 IDD-GHLFLITRAEAVAPIIMKFLAEER 267 (276)
T ss_pred EcC-CCchhhccHHHHHHHHHHHHHHhh
Confidence 974 999999999999999999998853
No 14
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.82 E-value=6e-19 Score=135.72 Aligned_cols=170 Identities=16% Similarity=0.138 Sum_probs=94.6
Q ss_pred CceecchhHHHHHHHHHhcCCc-cceEEEecCCCCCCchhHHHHHHHhHHHHHhhccchhHHHHHHHHhhchhhcCCCCC
Q 027174 1 MCMGVTAGAYILTLFAMKYRHR-VLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQV 79 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~~-V~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (227)
+++||||||.+|+.+|.++|+. |++++++++.+................... ..+.......+...++....... .
T Consensus 69 ~lvG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~ 145 (242)
T PRK11126 69 WLVGYSLGGRIAMYYACQGLAGGLCGLIVEGGNPGLQNAEERQARWQNDRQWA-QRFRQEPLEQVLADWYQQPVFAS--L 145 (242)
T ss_pred EEEEECHHHHHHHHHHHhCCcccccEEEEeCCCCCCCCHHHHHHHHhhhHHHH-HHhccCcHHHHHHHHHhcchhhc--c
Confidence 5899999999999999999765 999999987654322221110100000000 00000000111111211111100 0
Q ss_pred CChHHHHHHHHHhcccCchhHHHHHHHh--cCCCCCccccCcccccEEEEecCCCcccchHHHHHhhhcCCCcEEEEecC
Q 027174 80 PESDIVQACRRLLDERQSSNVWHFLEAI--NGRPDISEGLRKLQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQA 157 (227)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~ 157 (227)
..+....+................... ....+..+.+.+++||+++++|++|..+. .+.+. .+++++++++
T Consensus 146 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~---~~~~~---~~~~~~~i~~ 218 (242)
T PRK11126 146 -NAEQRQQLVAKRSNNNGAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ---ALAQQ---LALPLHVIPN 218 (242)
T ss_pred -CccHHHHHHHhcccCCHHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH---HHHHH---hcCeEEEeCC
Confidence 111222222211111111222222211 12234445678999999999999998653 22222 3689999999
Q ss_pred CCCCCCccChHHHHHHHHHHHhh
Q 027174 158 CGSMVTEEQPHAMLIPMEYFLMG 180 (227)
Q Consensus 158 ~gH~~~~e~p~~~~~~i~~fl~~ 180 (227)
|||++++|+|+++++.|.+|+++
T Consensus 219 ~gH~~~~e~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 219 AGHNAHRENPAAFAASLAQILRL 241 (242)
T ss_pred CCCchhhhChHHHHHHHHHHHhh
Confidence 99999999999999999999975
No 15
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.81 E-value=7.8e-19 Score=136.07 Aligned_cols=165 Identities=13% Similarity=0.121 Sum_probs=96.0
Q ss_pred CceecchhHHHHHHHHHhcCCccceEEEecCCCCCCchhHHHHHHHhHHHHHhhccchhHHHHHHHHhhchhhcCCCCCC
Q 027174 1 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVP 80 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (227)
+++||||||.+++.+|.++|++|+++|++++.+.....................+.... ... ...+... ..
T Consensus 84 ~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~-~~----- 154 (255)
T PRK10673 84 TFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATTR--QQA-AAIMRQH-LN----- 154 (255)
T ss_pred EEEEECHHHHHHHHHHHhCHhhcceEEEEecCCCCccchhhHHHHHHHHHhhhcccccH--HHH-HHHHHHh-cC-----
Confidence 47999999999999999999999999999865432111000000000111101111110 000 0010000 00
Q ss_pred ChHHHHHHHHHhccc----CchhHHHHHHHhcCCCCCccccCcccccEEEEecCCCccc--chHHHHHhhhcCCCcEEEE
Q 027174 81 ESDIVQACRRLLDER----QSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVE 154 (227)
Q Consensus 81 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~--~~~~~~~~~~~~~~~~~~~ 154 (227)
.....+.....+... .....+....... ..+.+..+++|+++|+|++|.++ .....+.+.+ +++++++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~--~~~~~~~ 228 (255)
T PRK10673 155 EEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIV----GWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQF--PQARAHV 228 (255)
T ss_pred CHHHHHHHHhcCCcceeEeeHHHHHHhHHHHh----CCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhC--CCcEEEE
Confidence 111122221111111 1111111122111 12345678999999999999987 4455578888 8999999
Q ss_pred ecCCCCCCCccChHHHHHHHHHHHhh
Q 027174 155 VQACGSMVTEEQPHAMLIPMEYFLMG 180 (227)
Q Consensus 155 i~~~gH~~~~e~p~~~~~~i~~fl~~ 180 (227)
++++||++++|+|+++++.|.+|+++
T Consensus 229 ~~~~gH~~~~~~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 229 IAGAGHWVHAEKPDAVLRAIRRYLND 254 (255)
T ss_pred eCCCCCeeeccCHHHHHHHHHHHHhc
Confidence 99999999999999999999999975
No 16
>PLN02578 hydrolase
Probab=99.81 E-value=7.3e-19 Score=142.69 Aligned_cols=65 Identities=22% Similarity=0.361 Sum_probs=56.3
Q ss_pred CCccccCcccccEEEEecCCCccc--chHHHHHhhhcCCCcEEEEecCCCCCCCccChHHHHHHHHHHHh
Q 027174 112 DISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLM 179 (227)
Q Consensus 112 ~~~~~l~~i~~Pvlii~G~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 179 (227)
+..+.+.++++|+++|+|++|.++ ..+..+.+.+ ++++++++ ++||++++|+|++|++.|.+|++
T Consensus 287 ~~~~~l~~i~~PvLiI~G~~D~~v~~~~~~~l~~~~--p~a~l~~i-~~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 287 TLDSLLSKLSCPLLLLWGDLDPWVGPAKAEKIKAFY--PDTTLVNL-QAGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred CHHHHhhcCCCCEEEEEeCCCCCCCHHHHHHHHHhC--CCCEEEEe-CCCCCccccCHHHHHHHHHHHHh
Confidence 344567899999999999999987 4555678888 88999999 69999999999999999999996
No 17
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.81 E-value=8.4e-19 Score=141.81 Aligned_cols=66 Identities=9% Similarity=0.125 Sum_probs=56.4
Q ss_pred ccCcccccEEEEecCCCcccc--hHHHHHhhhcCCCcEEEEecC-CCCCCCccChHHHHHHHHHHHhhCC
Q 027174 116 GLRKLQCRSLIFVGESSPFHS--EAVHMTSKIDRRYSALVEVQA-CGSMVTEEQPHAMLIPMEYFLMGYG 182 (227)
Q Consensus 116 ~l~~i~~Pvlii~G~~D~~~~--~~~~~~~~~~~~~~~~~~i~~-~gH~~~~e~p~~~~~~i~~fl~~~~ 182 (227)
.+.++++|+|+++|++|.+++ ....+.+.+. ++++++++++ +||++++|+|++|++.|.+||++.+
T Consensus 272 ~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~-p~a~l~~i~~~aGH~~~lE~Pe~~~~~l~~FL~~~~ 340 (343)
T PRK08775 272 DPEAIRVPTVVVAVEGDRLVPLADLVELAEGLG-PRGSLRVLRSPYGHDAFLKETDRIDAILTTALRSTG 340 (343)
T ss_pred ChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcC-CCCeEEEEeCCccHHHHhcCHHHHHHHHHHHHHhcc
Confidence 367899999999999999874 4556777663 5799999985 9999999999999999999998754
No 18
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.80 E-value=6.9e-19 Score=135.00 Aligned_cols=168 Identities=18% Similarity=0.267 Sum_probs=102.1
Q ss_pred CceecchhHHHHHHHHHhcCCccceEEEecCCCCCCchhHHHHHHHhHHHHHhhccchhHHHHHHHHhhchhhcCCCCCC
Q 027174 1 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVP 80 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (227)
+++||||||.+++.+|.++|++|+++|++++.........+..... .......... .......++.......
T Consensus 82 ~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~---- 153 (251)
T TIGR02427 82 VFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNARIA---AVRAEGLAAL-ADAVLERWFTPGFREA---- 153 (251)
T ss_pred EEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHHHh---hhhhccHHHH-HHHHHHHHcccccccC----
Confidence 4789999999999999999999999999987654333222211110 0000111111 1111122222111110
Q ss_pred ChHHHHHHHHHhcccCchhHHHHHHHhcCCCCCccccCcccccEEEEecCCCcccc--hHHHHHhhhcCCCcEEEEecCC
Q 027174 81 ESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS--EAVHMTSKIDRRYSALVEVQAC 158 (227)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~--~~~~~~~~~~~~~~~~~~i~~~ 158 (227)
.....+.+...........+...... ....+..+.+.++++|+++++|++|.+++ ....+.+.+ ++.++++++++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~ 230 (251)
T TIGR02427 154 HPARLDLYRNMLVRQPPDGYAGCCAA-IRDADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLV--PGARFAEIRGA 230 (251)
T ss_pred ChHHHHHHHHHHHhcCHHHHHHHHHH-HhcccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhC--CCceEEEECCC
Confidence 22222333332222222222222222 12233445567889999999999999983 445577777 78899999999
Q ss_pred CCCCCccChHHHHHHHHHHHh
Q 027174 159 GSMVTEEQPHAMLIPMEYFLM 179 (227)
Q Consensus 159 gH~~~~e~p~~~~~~i~~fl~ 179 (227)
||++++|+|+++++.+.+|++
T Consensus 231 gH~~~~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 231 GHIPCVEQPEAFNAALRDFLR 251 (251)
T ss_pred CCcccccChHHHHHHHHHHhC
Confidence 999999999999999999984
No 19
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.80 E-value=4.9e-19 Score=146.94 Aligned_cols=61 Identities=11% Similarity=0.182 Sum_probs=54.9
Q ss_pred CcccccEEEEecCCCccc--chHHHHHhhhcCCCcEEEEecCCCCCCCc-cChHHHHHHHHHHHhh
Q 027174 118 RKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTE-EQPHAMLIPMEYFLMG 180 (227)
Q Consensus 118 ~~i~~Pvlii~G~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~ 180 (227)
.++++|+++++|++|.++ +.++.+++.+ |++++++++++||++++ |+|++|++.|.+|++.
T Consensus 415 ~~I~vPtLII~Ge~D~ivP~~~~~~la~~i--P~a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~~ 478 (481)
T PLN03087 415 DQLKCDVAIFHGGDDELIPVECSYAVKAKV--PRARVKVIDDKDHITIVVGRQKEFARELEEIWRR 478 (481)
T ss_pred HhCCCCEEEEEECCCCCCCHHHHHHHHHhC--CCCEEEEeCCCCCcchhhcCHHHHHHHHHHHhhc
Confidence 468999999999999988 4556688999 89999999999999986 9999999999999965
No 20
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.80 E-value=1.4e-19 Score=144.20 Aligned_cols=63 Identities=22% Similarity=0.417 Sum_probs=56.9
Q ss_pred cCccc-ccEEEEecCCCccc--chHHHHHhhhcCCCcEEEEecCCCCCCCccChHHHHHHHHHHHhhC
Q 027174 117 LRKLQ-CRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 181 (227)
Q Consensus 117 l~~i~-~Pvlii~G~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 181 (227)
+.++. ||++++||+.|+++ +.+..+.+.+ |+++++++++|||.+|+|+|++|+..|..|+++.
T Consensus 259 ~~~i~~~pvlii~G~~D~~~p~~~~~~~~~~~--pn~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 259 IKKIWKCPVLIIWGDKDQIVPLELAEELKKKL--PNAELVEIPGAGHLPHLERPEEVAALLRSFIARL 324 (326)
T ss_pred hccccCCceEEEEcCcCCccCHHHHHHHHhhC--CCceEEEeCCCCcccccCCHHHHHHHHHHHHHHh
Confidence 45666 99999999999998 4567788888 9999999999999999999999999999999875
No 21
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.79 E-value=4.7e-19 Score=140.88 Aligned_cols=64 Identities=14% Similarity=0.195 Sum_probs=55.2
Q ss_pred ccCcccccEEEEecCCCcccc-hHHHHHhhhcCCCcE---EEEecCCCCCCCccChHHHHHHHHHHHhhC
Q 027174 116 GLRKLQCRSLIFVGESSPFHS-EAVHMTSKIDRRYSA---LVEVQACGSMVTEEQPHAMLIPMEYFLMGY 181 (227)
Q Consensus 116 ~l~~i~~Pvlii~G~~D~~~~-~~~~~~~~~~~~~~~---~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 181 (227)
.+.++++|+++|+|++|++++ ....+.+.+ ++++ +++++++||++++|+|++|++.|.+|++++
T Consensus 234 ~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~--~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 234 VLERWDKPFLTAFSDSDPITGGGDAILQKRI--PGAAGQPHPTIKGAGHFLQEDSGEELAEAVLEFIRAT 301 (302)
T ss_pred hhhcCCCceEEEecCCCCcccCchHHHHhhc--ccccccceeeecCCCccchhhChHHHHHHHHHHHhcC
Confidence 367899999999999999883 335577878 6665 889999999999999999999999999864
No 22
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.79 E-value=1.6e-18 Score=141.78 Aligned_cols=68 Identities=12% Similarity=0.102 Sum_probs=58.2
Q ss_pred CccccCcccccEEEEecCCCccc--chHHHHHhhhcCCCc----EEEEec-CCCCCCCccChHHHHHHHHHHHhhCC
Q 027174 113 ISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYS----ALVEVQ-ACGSMVTEEQPHAMLIPMEYFLMGYG 182 (227)
Q Consensus 113 ~~~~l~~i~~Pvlii~G~~D~~~--~~~~~~~~~~~~~~~----~~~~i~-~~gH~~~~e~p~~~~~~i~~fl~~~~ 182 (227)
+.+.+.+|++|+|+|+|++|.++ +.++.+++.+ +++ ++++++ ++||++++|+|++|++.|.+||++..
T Consensus 301 ~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i--~~a~~~~~l~~i~~~~GH~~~le~p~~~~~~L~~FL~~~~ 375 (379)
T PRK00175 301 LAAALARIKARFLVVSFTSDWLFPPARSREIVDAL--LAAGADVSYAEIDSPYGHDAFLLDDPRYGRLVRAFLERAA 375 (379)
T ss_pred HHHHHhcCCCCEEEEEECCccccCHHHHHHHHHHH--HhcCCCeEEEEeCCCCCchhHhcCHHHHHHHHHHHHHhhh
Confidence 45668899999999999999987 4566688888 666 777775 99999999999999999999998854
No 23
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.79 E-value=2.8e-18 Score=139.85 Aligned_cols=69 Identities=16% Similarity=0.277 Sum_probs=57.2
Q ss_pred CCccccCcccccEEEEecCCCcccc--hHHHHHhhhcC--CCcEEEEecC-CCCCCCccChHHHHHHHHHHHhh
Q 027174 112 DISEGLRKLQCRSLIFVGESSPFHS--EAVHMTSKIDR--RYSALVEVQA-CGSMVTEEQPHAMLIPMEYFLMG 180 (227)
Q Consensus 112 ~~~~~l~~i~~Pvlii~G~~D~~~~--~~~~~~~~~~~--~~~~~~~i~~-~gH~~~~e~p~~~~~~i~~fl~~ 180 (227)
+..+.+.++++|+++|+|++|.+++ ..+.+.+.+.. ++++++++++ +||++++|+|++|++.|.+|+++
T Consensus 314 dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~a~l~~I~s~~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 314 SLEEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQGKYAEVYEIESINGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred CHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCeEEEEECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence 3455678899999999999999883 45557777721 3689999985 99999999999999999999975
No 24
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.79 E-value=2.8e-18 Score=131.36 Aligned_cols=172 Identities=21% Similarity=0.240 Sum_probs=98.8
Q ss_pred CceecchhHHHHHHHHHhcCCccceEEEecCCCCCCchhHHHHH----HHhHHHHHhhccchhHHHHHHHHhhchhhcCC
Q 027174 1 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYN----KVMSNLLYYYGMCGVVKELLLKRYFSKEVRGN 76 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (227)
+++||||||.+++.+|.++|+.|.+++++++.+........... ......+........ ...++.......
T Consensus 73 ~l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 147 (251)
T TIGR03695 73 FLVGYSMGGRIALYYALQYPERVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEAF-----LDDWYQQPLFAS 147 (251)
T ss_pred EEEEeccHHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccHH-----HHHHhcCceeee
Confidence 47899999999999999999999999999987653321111000 001111111111111 111111100000
Q ss_pred CCCCChHHHHHHHHHhcccCchhHHHHHHHh--cCCCCCccccCcccccEEEEecCCCccc-chHHHHHhhhcCCCcEEE
Q 027174 77 AQVPESDIVQACRRLLDERQSSNVWHFLEAI--NGRPDISEGLRKLQCRSLIFVGESSPFH-SEAVHMTSKIDRRYSALV 153 (227)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~i~~Pvlii~G~~D~~~-~~~~~~~~~~~~~~~~~~ 153 (227)
....+.+..+.+................... ....+..+.+.++++|+++++|++|..+ ...+.+.+.. ++++++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~--~~~~~~ 225 (251)
T TIGR03695 148 QKNLPPEQRQALRAKRLANNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFVQIAKEMQKLL--PNLTLV 225 (251)
T ss_pred cccCChHHhHHHHHhcccccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHHHHHHHHHhcC--CCCcEE
Confidence 0000222222222222112222222222211 1122333446789999999999999876 3445577777 789999
Q ss_pred EecCCCCCCCccChHHHHHHHHHHHh
Q 027174 154 EVQACGSMVTEEQPHAMLIPMEYFLM 179 (227)
Q Consensus 154 ~i~~~gH~~~~e~p~~~~~~i~~fl~ 179 (227)
.++++||++++|+|+++++.|.+|++
T Consensus 226 ~~~~~gH~~~~e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 226 IIANAGHNIHLENPEAFAKILLAFLE 251 (251)
T ss_pred EEcCCCCCcCccChHHHHHHHHHHhC
Confidence 99999999999999999999999984
No 25
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.78 E-value=2.1e-18 Score=139.92 Aligned_cols=65 Identities=14% Similarity=0.124 Sum_probs=55.5
Q ss_pred CccccCcccccEEEEecCCCccc--chHHHHHhhhcCCCcEEE-----EecCCCCCCCccChHHHHHHHHHHHh
Q 027174 113 ISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALV-----EVQACGSMVTEEQPHAMLIPMEYFLM 179 (227)
Q Consensus 113 ~~~~l~~i~~Pvlii~G~~D~~~--~~~~~~~~~~~~~~~~~~-----~i~~~gH~~~~e~p~~~~~~i~~fl~ 179 (227)
..+.+.+|++|+|+|+|++|.++ ..++.+++.+ ++++++ +++++||++++|+|++|++.|.+||+
T Consensus 280 ~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i--~~~~~~v~~~~i~~~~GH~~~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 280 LTEALSRIKAPFLVVSITSDWLFPPAESRELAKAL--PAAGLRVTYVEIESPYGHDAFLVETDQVEELIRGFLR 351 (351)
T ss_pred HHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHH--hhcCCceEEEEeCCCCCcchhhcCHHHHHHHHHHHhC
Confidence 44668899999999999999987 3566688888 777655 56799999999999999999999984
No 26
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.78 E-value=5.8e-18 Score=130.71 Aligned_cols=171 Identities=16% Similarity=0.213 Sum_probs=97.8
Q ss_pred CceecchhHHHHHHHHHhcCCccceEEEecCCCCCCchhHHHHHHHhHHHHHhhccchhHHHHHHHHhhchhhcCCCCCC
Q 027174 1 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVP 80 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (227)
+++||||||.+|+.+|.++|++|+++|++++.............. ................ .....+....... .
T Consensus 83 ~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~- 157 (257)
T TIGR03611 83 HFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTRRCFDV-RIALLQHAGPEAYVHA-QALFLYPADWISE--N- 157 (257)
T ss_pred EEEEechhHHHHHHHHHHChHHhHHheeecCCCCCChhHHHHHHH-HHHHHhccCcchhhhh-hhhhhccccHhhc--c-
Confidence 479999999999999999999999999999765432211110000 0011100011111000 0000000000000 0
Q ss_pred ChHHHHHHHHHhcc-cCchhHHHHHHHhcCCCCCccccCcccccEEEEecCCCccc--chHHHHHhhhcCCCcEEEEecC
Q 027174 81 ESDIVQACRRLLDE-RQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQA 157 (227)
Q Consensus 81 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~--~~~~~~~~~~~~~~~~~~~i~~ 157 (227)
.....+........ ............ ....+....+.++++|+++++|++|.++ +.+..+.+.+ ++++++.+++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~ 234 (257)
T TIGR03611 158 AARLAADEAHALAHFPGKANVLRRINA-LEAFDVSARLDRIQHPVLLIANRDDMLVPYTQSLRLAAAL--PNAQLKLLPY 234 (257)
T ss_pred chhhhhhhhhcccccCccHHHHHHHHH-HHcCCcHHHhcccCccEEEEecCcCcccCHHHHHHHHHhc--CCceEEEECC
Confidence 00000000000000 111122211122 1223444567889999999999999988 3555677888 8899999999
Q ss_pred CCCCCCccChHHHHHHHHHHHh
Q 027174 158 CGSMVTEEQPHAMLIPMEYFLM 179 (227)
Q Consensus 158 ~gH~~~~e~p~~~~~~i~~fl~ 179 (227)
+||++++|+|+++++.|.+||+
T Consensus 235 ~gH~~~~~~~~~~~~~i~~fl~ 256 (257)
T TIGR03611 235 GGHASNVTDPETFNRALLDFLK 256 (257)
T ss_pred CCCCccccCHHHHHHHHHHHhc
Confidence 9999999999999999999996
No 27
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.78 E-value=6e-19 Score=142.98 Aligned_cols=69 Identities=17% Similarity=0.150 Sum_probs=57.7
Q ss_pred ccccCcccccEEEEecCCCccc--chHHHHHhhhcCCCcEEEEecCCCCCCCccChHH----HHHHHHHHHhhCC
Q 027174 114 SEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHA----MLIPMEYFLMGYG 182 (227)
Q Consensus 114 ~~~l~~i~~Pvlii~G~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~----~~~~i~~fl~~~~ 182 (227)
...+.++++|+|+++|++|.++ ..+..+.+.+..++.++++++++||++++|+|++ +.+.|.+||++..
T Consensus 272 ~~~l~~i~~P~Lii~G~~D~vv~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~ 346 (349)
T PLN02385 272 EMQLEEVSLPLLILHGEADKVTDPSVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHS 346 (349)
T ss_pred HHhcccCCCCEEEEEeCCCCccChHHHHHHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhc
Confidence 3457789999999999999998 3456677777446789999999999999999987 8888999998753
No 28
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.77 E-value=2.3e-18 Score=135.84 Aligned_cols=56 Identities=13% Similarity=0.156 Sum_probs=50.8
Q ss_pred cccEEEEecCCCccc-c--hHHHHHhhhcCCCcEEEEecCCCCCCCccChHHHHHHHHHHH
Q 027174 121 QCRSLIFVGESSPFH-S--EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFL 178 (227)
Q Consensus 121 ~~Pvlii~G~~D~~~-~--~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 178 (227)
++|+++|+|++|.++ + ..+.+.+.+ |++++++++++||++++|+|++|++.|.+|+
T Consensus 227 ~~PtliI~G~~D~~~~~~~~~~~~~~~i--p~~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 227 TKPTLLVWGMKDVAFRPKTILPRLRATF--PDHVLVELPNAKHFIQEDAPDRIAAAIIERF 285 (286)
T ss_pred CCCeEEEecCCCcccCcHHHHHHHHHhc--CCCeEEEcCCCcccccccCHHHHHHHHHHhc
Confidence 899999999999876 3 245688888 8999999999999999999999999999997
No 29
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.77 E-value=1e-17 Score=131.19 Aligned_cols=63 Identities=17% Similarity=0.200 Sum_probs=55.8
Q ss_pred cccCcccccEEEEecCCCccc--chHHHHHhhhcCCCcEEEEecCCCCCCCccChHHHHHHHHHHHh
Q 027174 115 EGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLM 179 (227)
Q Consensus 115 ~~l~~i~~Pvlii~G~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 179 (227)
..+.++++|+++++|++|.++ ...+.+.+.+ ++++++.++++||++++|+|+++++.|.+|++
T Consensus 214 ~~~~~i~~P~lii~g~~D~~vp~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 214 RDLPRITIPLHLIAGEEDKAVPPDESKRAATRV--PTATLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred hhcccCCCCEEEEEeCCCcccCHHHHHHHHHhc--cCCeEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 457789999999999999988 3455677778 88999999999999999999999999999984
No 30
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.77 E-value=6.1e-18 Score=130.65 Aligned_cols=180 Identities=16% Similarity=0.180 Sum_probs=105.4
Q ss_pred CceecchhHHHHHHHHHhcCCccceEEEecCCCCCCchhHHHHHHH------hHHHHHhhc-----cchhHHHHHHHHhh
Q 027174 1 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKV------MSNLLYYYG-----MCGVVKELLLKRYF 69 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~~~~~~~~~~~~~------~~~~~~~~~-----~~~~~~~~~~~~~~ 69 (227)
+++||+|||+||+.+|..+|++|+++|+++.....+.......... ..-.+...+ +.....+.+...++
T Consensus 116 ~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ~~~~~E~~~s~~~~~~~~~~~~ 195 (322)
T KOG4178|consen 116 FLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYICLFQEPGKPETELSKDDTEMLVKTFR 195 (322)
T ss_pred EEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccchhhhhccccCccceeEeccccCcchhhhccchhHHhHHhhh
Confidence 4799999999999999999999999999997665211111000000 000000001 11111121222222
Q ss_pred chhhcCCC----------CCCChHHHHHHHHHhcccCchhHHHHHHHhcCCC-CCccccCcccccEEEEecCCCcccc-h
Q 027174 70 SKEVRGNA----------QVPESDIVQACRRLLDERQSSNVWHFLEAINGRP-DISEGLRKLQCRSLIFVGESSPFHS-E 137 (227)
Q Consensus 70 ~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~i~~Pvlii~G~~D~~~~-~ 137 (227)
........ .....+.++.+...+...+-.....+.+.+.... .....+.++++|+++++|+.|.+.+ .
T Consensus 196 ~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r~w~a~~~~~~~i~iPv~fi~G~~D~v~~~p 275 (322)
T KOG4178|consen 196 TRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRRNWEAAPWALAKITIPVLFIWGDLDPVLPYP 275 (322)
T ss_pred ccccCCccccCCCCCCccchhhHHHHHHHHhccccccccccchhhHHHhhCchhccccccccccceEEEEecCcccccch
Confidence 22111000 0002344555554443333333334444433222 2344578899999999999999873 2
Q ss_pred --HHHHHhhhcCCCc-EEEEecCCCCCCCccChHHHHHHHHHHHhhCC
Q 027174 138 --AVHMTSKIDRRYS-ALVEVQACGSMVTEEQPHAMLIPMEYFLMGYG 182 (227)
Q Consensus 138 --~~~~~~~~~~~~~-~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 182 (227)
...+.+.+ +.. +.++++++||++++|+|++|++++.+|+++..
T Consensus 276 ~~~~~~rk~v--p~l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~~~~ 321 (322)
T KOG4178|consen 276 IFGELYRKDV--PRLTERVVIEGIGHFVQQEKPQEVNQAILGFINSFS 321 (322)
T ss_pred hHHHHHHHhh--ccccceEEecCCcccccccCHHHHHHHHHHHHHhhc
Confidence 33355555 554 78899999999999999999999999998753
No 31
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.77 E-value=2.6e-17 Score=135.44 Aligned_cols=69 Identities=14% Similarity=0.216 Sum_probs=56.5
Q ss_pred CCccccCcccccEEEEecCCCcccc-hHHHHHhhhcCCCcEEEEecCCCCCCCccChHHHHHHHHHHHhhC
Q 027174 112 DISEGLRKLQCRSLIFVGESSPFHS-EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 181 (227)
Q Consensus 112 ~~~~~l~~i~~Pvlii~G~~D~~~~-~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 181 (227)
+....+.++++|+++|+|++|.+.+ ....+.+... +.+++++++++||++++|+|++|++.+.+|++..
T Consensus 316 ~~~~~l~~I~vP~liI~G~~D~i~~~~~~~~~~~~~-~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~~~ 385 (402)
T PLN02894 316 PLLESASEWKVPTTFIYGRHDWMNYEGAVEARKRMK-VPCEIIRVPQGGHFVFLDNPSGFHSAVLYACRKY 385 (402)
T ss_pred hHhhhcccCCCCEEEEEeCCCCCCcHHHHHHHHHcC-CCCcEEEeCCCCCeeeccCHHHHHHHHHHHHHHh
Confidence 4445678899999999999998763 3444555552 4588999999999999999999999999999875
No 32
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.77 E-value=2e-17 Score=129.56 Aligned_cols=65 Identities=25% Similarity=0.316 Sum_probs=55.8
Q ss_pred CccccCcccccEEEEecCCCccc-chHHHHHhhhcCCCcEEEEecCCCCCCCccChHHHHHHHHHHHh
Q 027174 113 ISEGLRKLQCRSLIFVGESSPFH-SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLM 179 (227)
Q Consensus 113 ~~~~l~~i~~Pvlii~G~~D~~~-~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 179 (227)
..+.+.++++|+++++|++|.+. ...+.+.+.+ +++++++++++||++++|+|+++++.|.+|++
T Consensus 223 ~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 223 ITDKLSEIKVPTLLTVGEFDTMTPEAAREMQELI--AGSRLVVFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred HHHHhhccCCCEEEEecCCCccCHHHHHHHHHhc--cCCeEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 33456789999999999999865 4455577777 78899999999999999999999999999984
No 33
>PHA02857 monoglyceride lipase; Provisional
Probab=99.76 E-value=3e-18 Score=134.47 Aligned_cols=166 Identities=16% Similarity=0.158 Sum_probs=93.2
Q ss_pred CceecchhHHHHHHHHHhcCCccceEEEecCCCCCCchhHHHHHHHhHHHHHhhccchhHHHHHHHHhhchhhcCCCCCC
Q 027174 1 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVP 80 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (227)
+++||||||.+|+.+|.++|++|+++|++++........ . .................. ..+ .+.....
T Consensus 100 ~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~~-~--~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~---- 167 (276)
T PHA02857 100 FLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEAVP-R--LNLLAAKLMGIFYPNKIV----GKL-CPESVSR---- 167 (276)
T ss_pred EEEEcCchHHHHHHHHHhCccccceEEEecccccccccc-H--HHHHHHHHHHHhCCCCcc----CCC-CHhhccC----
Confidence 479999999999999999999999999999865422110 0 000000000000000000 000 0000000
Q ss_pred ChHHHHHHHHH-hcccC--chhHHHHHHHhcCCCCCccccCcccccEEEEecCCCccc--chHHHHHhhhcCCCcEEEEe
Q 027174 81 ESDIVQACRRL-LDERQ--SSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEV 155 (227)
Q Consensus 81 ~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~--~~~~~~~~~~~~~~~~~~~i 155 (227)
+.+....+... ..... ...+...... ...+..+.+.++++|+++++|++|.++ ..+..+.+.+. ++.++.++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~-~~~~~~~~ 244 (276)
T PHA02857 168 DMDEVYKYQYDPLVNHEKIKAGFASQVLK--ATNKVRKIIPKIKTPILILQGTNNEISDVSGAYYFMQHAN-CNREIKIY 244 (276)
T ss_pred CHHHHHHHhcCCCccCCCccHHHHHHHHH--HHHHHHHhcccCCCCEEEEecCCCCcCChHHHHHHHHHcc-CCceEEEe
Confidence 11001111000 00000 0111111110 011233457889999999999999998 45556777663 46899999
Q ss_pred cCCCCCCCccCh---HHHHHHHHHHHhhC
Q 027174 156 QACGSMVTEEQP---HAMLIPMEYFLMGY 181 (227)
Q Consensus 156 ~~~gH~~~~e~p---~~~~~~i~~fl~~~ 181 (227)
+++||+++.|++ +++.+.+.+||++.
T Consensus 245 ~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 245 EGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred CCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 999999999977 46889999999874
No 34
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.75 E-value=1.7e-17 Score=155.70 Aligned_cols=180 Identities=18% Similarity=0.259 Sum_probs=103.3
Q ss_pred CceecchhHHHHHHHHHhcCCccceEEEecCCCCCCchhHHHHHHHhHHHHHhhccchhHHHHHHHHhhchhhcCCCCCC
Q 027174 1 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVP 80 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (227)
+++||||||.+|+.+|.+||++|+++|++++.+.......+........... ..........+...++....... ...
T Consensus 1448 ~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~-~~l~~~g~~~~~~~~~~~~~~~~-~~~ 1525 (1655)
T PLN02980 1448 TLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVARKIRSAKDDSRA-RMLIDHGLEIFLENWYSGELWKS-LRN 1525 (1655)
T ss_pred EEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHHHHHHhhhhhHHH-HHHHhhhHHHHHHHhccHHHhhh-hcc
Confidence 4799999999999999999999999999987654322211110000000000 00000001112222222211100 000
Q ss_pred ChHHHHHHHHHhcccCchhHHHHHHHh--cCCCCCccccCcccccEEEEecCCCcccc-hHHHHHhhhcC----------
Q 027174 81 ESDIVQACRRLLDERQSSNVWHFLEAI--NGRPDISEGLRKLQCRSLIFVGESSPFHS-EAVHMTSKIDR---------- 147 (227)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~i~~Pvlii~G~~D~~~~-~~~~~~~~~~~---------- 147 (227)
.+...+.+...........+...+..+ ....+..+.+.++++|+|+|+|++|..++ .+..+.+.+.+
T Consensus 1526 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~~~a~~~~~~i~~a~~~~~~~~~ 1605 (1655)
T PLN02980 1526 HPHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKFKQIAQKMYREIGKSKESGNDKGK 1605 (1655)
T ss_pred CHHHHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhCCCCEEEEEECCCCccHHHHHHHHHHccccccccccccc
Confidence 222222222222222222222222221 12334556688999999999999999773 44556666621
Q ss_pred CCcEEEEecCCCCCCCccChHHHHHHHHHHHhhCC
Q 027174 148 RYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYG 182 (227)
Q Consensus 148 ~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 182 (227)
+.++++++++|||++++|+|++|++.|.+||++..
T Consensus 1606 ~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~~~~ 1640 (1655)
T PLN02980 1606 EIIEIVEIPNCGHAVHLENPLPVIRALRKFLTRLH 1640 (1655)
T ss_pred cceEEEEECCCCCchHHHCHHHHHHHHHHHHHhcc
Confidence 12589999999999999999999999999999754
No 35
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.74 E-value=3.1e-18 Score=129.26 Aligned_cols=154 Identities=22% Similarity=0.352 Sum_probs=89.5
Q ss_pred CceecchhHHHHHHHHHhcCCccceEEEecCCCCCCchh--HHHHHHHhHHHHHhhc--cchhHHHHHHHHhhchhhcCC
Q 027174 1 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWT--EWLYNKVMSNLLYYYG--MCGVVKELLLKRYFSKEVRGN 76 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~~~~~~--~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 76 (227)
+++|||+||.+++.+|.++|++|+++|++++........ .. .......+.... ............++.
T Consensus 69 ~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 140 (228)
T PF12697_consen 69 ILVGHSMGGMIALRLAARYPDRVKGLVLLSPPPPLPDSPSRSF--GPSFIRRLLAWRSRSLRRLASRFFYRWFD------ 140 (228)
T ss_dssp EEEEETHHHHHHHHHHHHSGGGEEEEEEESESSSHHHHHCHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHT------
T ss_pred cccccccccccccccccccccccccceeecccccccccccccc--cchhhhhhhhccccccccccccccccccc------
Confidence 479999999999999999999999999999887532211 10 011111110000 000001111111111
Q ss_pred CCCCChHHHHHHHHHhcccCchhHHHHHHHhcCCCCCccccCcccccEEEEecCCCccc--chHHHHHhhhcCCCcEEEE
Q 027174 77 AQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVE 154 (227)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~--~~~~~~~~~~~~~~~~~~~ 154 (227)
..+ .+.+... ....+...........+....+.++++|+++++|++|.++ ...+.+.+.+ +++++++
T Consensus 141 ----~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~--~~~~~~~ 209 (228)
T PF12697_consen 141 ----GDE-PEDLIRS----SRRALAEYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKL--PNAELVV 209 (228)
T ss_dssp ----HHH-HHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHS--TTEEEEE
T ss_pred ----ccc-ccccccc----cccccccccccccccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHC--CCCEEEE
Confidence 111 1111111 0111111111100011223446778999999999999998 3555577777 8899999
Q ss_pred ecCCCCCCCccChHHHHHH
Q 027174 155 VQACGSMVTEEQPHAMLIP 173 (227)
Q Consensus 155 i~~~gH~~~~e~p~~~~~~ 173 (227)
++++||++++|+|++|+++
T Consensus 210 ~~~~gH~~~~~~p~~~~~a 228 (228)
T PF12697_consen 210 IPGAGHFLFLEQPDEVAEA 228 (228)
T ss_dssp ETTSSSTHHHHSHHHHHHH
T ss_pred ECCCCCccHHHCHHHHhcC
Confidence 9999999999999999874
No 36
>PRK10749 lysophospholipase L2; Provisional
Probab=99.73 E-value=1.4e-17 Score=133.93 Aligned_cols=67 Identities=9% Similarity=0.016 Sum_probs=52.7
Q ss_pred cccCcccccEEEEecCCCcccc--hHHHHHhhhc-----CCCcEEEEecCCCCCCCccCh---HHHHHHHHHHHhhC
Q 027174 115 EGLRKLQCRSLIFVGESSPFHS--EAVHMTSKID-----RRYSALVEVQACGSMVTEEQP---HAMLIPMEYFLMGY 181 (227)
Q Consensus 115 ~~l~~i~~Pvlii~G~~D~~~~--~~~~~~~~~~-----~~~~~~~~i~~~gH~~~~e~p---~~~~~~i~~fl~~~ 181 (227)
..+.++++|+|+++|++|.+++ .+..+.+.+. .+++++++++||||.++.|.+ +.+.+.|.+|+++.
T Consensus 253 ~~~~~i~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 253 AGAGDITTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNRH 329 (330)
T ss_pred hhccCCCCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhhc
Confidence 3467789999999999999983 4444555541 145689999999999999986 56888999999864
No 37
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.73 E-value=2e-16 Score=128.85 Aligned_cols=60 Identities=12% Similarity=0.101 Sum_probs=50.1
Q ss_pred CcccccEEEEecCCCcccc--hHHHHHhhhcCCCcEEEEecCCCCCCCccChHHHHHHHHHHHhh
Q 027174 118 RKLQCRSLIFVGESSPFHS--EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 180 (227)
Q Consensus 118 ~~i~~Pvlii~G~~D~~~~--~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 180 (227)
.++++|+++++|+.|.+++ ....+.+. ++++++++++|||++++|+|+++++.|.+|+.+
T Consensus 322 ~~i~vPvLiI~G~~D~~v~~~~~~~~a~~---~~a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~~ 383 (383)
T PLN03084 322 KNWKTPITVCWGLRDRWLNYDGVEDFCKS---SQHKLIELPMAGHHVQEDCGEELGGIISGILSK 383 (383)
T ss_pred ccCCCCEEEEeeCCCCCcCHHHHHHHHHh---cCCeEEEECCCCCCcchhCHHHHHHHHHHHhhC
Confidence 3579999999999999873 33344443 368999999999999999999999999999863
No 38
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.69 E-value=6.7e-17 Score=130.08 Aligned_cols=67 Identities=6% Similarity=0.047 Sum_probs=54.9
Q ss_pred cccCcccccEEEEecCCCccc--chHHHHHhhhcCCCcEEEEecCCCCCCCccChHH----HHHHHHHHHhhC
Q 027174 115 EGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHA----MLIPMEYFLMGY 181 (227)
Q Consensus 115 ~~l~~i~~Pvlii~G~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~----~~~~i~~fl~~~ 181 (227)
..+.++++|+|+++|++|.++ ..++.+.+.+..++.++++++++||++++++|+. +.+.+.+||.+.
T Consensus 245 ~~l~~i~~PvLii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~ 317 (330)
T PLN02298 245 KKLKDVSIPFIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNER 317 (330)
T ss_pred HhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHh
Confidence 446788999999999999998 4455576766445789999999999999998864 667888899875
No 39
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.69 E-value=4e-17 Score=124.12 Aligned_cols=59 Identities=22% Similarity=0.326 Sum_probs=51.6
Q ss_pred cccCcccccEEEEecCCCccc--chHHHHHhhhcCCCcEEEEecCCCCCCCccChHHHHHHHH
Q 027174 115 EGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPME 175 (227)
Q Consensus 115 ~~l~~i~~Pvlii~G~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~ 175 (227)
..+..+++|+++++|++|.++ .....+.+.+ |+.++++++++||+.++++|+++++.|.
T Consensus 169 ~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~--~~~~~~~~~~~GH~~~~~~~~~~~~~i~ 229 (230)
T PF00561_consen 169 PALSNIKVPTLIIWGEDDPLVPPESSEQLAKLI--PNSQLVLIEGSGHFAFLEGPDEFNEIII 229 (230)
T ss_dssp HHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHS--TTEEEEEETTCCSTHHHHSHHHHHHHHH
T ss_pred ccccccCCCeEEEEeCCCCCCCHHHHHHHHHhc--CCCEEEECCCCChHHHhcCHHhhhhhhc
Confidence 446779999999999999998 3455578888 8899999999999999999999999875
No 40
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.69 E-value=6e-16 Score=121.25 Aligned_cols=62 Identities=6% Similarity=-0.036 Sum_probs=51.9
Q ss_pred cCcc-cccEEEEecCCCcccc--hHHHHHhhhcCCCcEEEEecCCCCCCCccChHHHHHHHHHHHhhC
Q 027174 117 LRKL-QCRSLIFVGESSPFHS--EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 181 (227)
Q Consensus 117 l~~i-~~Pvlii~G~~D~~~~--~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 181 (227)
...+ ++|+++|+|++|..++ ..+.+.+.+ +.++++.++ +||.+++++|++|++.|.++....
T Consensus 206 ~~~~~~vP~l~I~g~~D~~ip~~~~~~m~~~~--~~~~~~~l~-~gH~p~ls~P~~~~~~i~~~a~~~ 270 (273)
T PLN02211 206 TGDIDKVPRVYIKTLHDHVVKPEQQEAMIKRW--PPSQVYELE-SDHSPFFSTPFLLFGLLIKAAASV 270 (273)
T ss_pred ccccCccceEEEEeCCCCCCCHHHHHHHHHhC--CccEEEEEC-CCCCccccCHHHHHHHHHHHHHHh
Confidence 3445 7899999999999983 445588888 778999996 999999999999999999987653
No 41
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.69 E-value=7.3e-16 Score=125.88 Aligned_cols=166 Identities=17% Similarity=0.169 Sum_probs=93.6
Q ss_pred CceecchhHHHHHHHHHhcCCccceEEEecCCCCCCchhHHHHHHHhHHHHHhhccchhHHHHHHHHhhchhhcCCCCCC
Q 027174 1 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVP 80 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (227)
+++||||||.+++.+|.++|++|.++|++++.............. +.. ......... .....+......
T Consensus 200 ~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~-~~~~~~~~~~~~----- 268 (371)
T PRK14875 200 HLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEINGDYIDG-FVA----AESRRELKP-VLELLFADPALV----- 268 (371)
T ss_pred EEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcccchhHHHH-hhc----ccchhHHHH-HHHHHhcChhhC-----
Confidence 479999999999999999999999999998764422211111000 000 000000111 111111110000
Q ss_pred ChHHHHHHHHHhcccC-chhHHHHHHHhc----CCCCCccccCcccccEEEEecCCCcccchHHHHHhhhcCCCcEEEEe
Q 027174 81 ESDIVQACRRLLDERQ-SSNVWHFLEAIN----GRPDISEGLRKLQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEV 155 (227)
Q Consensus 81 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i 155 (227)
.....+.+........ ...+........ ...+....+.+++||+++++|++|.+++... .+.+. ++.+++++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~--~~~l~-~~~~~~~~ 345 (371)
T PRK14875 269 TRQMVEDLLKYKRLDGVDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAAH--AQGLP-DGVAVHVL 345 (371)
T ss_pred CHHHHHHHHHHhccccHHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccCHHH--Hhhcc-CCCeEEEe
Confidence 2222222222111111 111111111111 1122334467889999999999999885332 22232 56899999
Q ss_pred cCCCCCCCccChHHHHHHHHHHHhh
Q 027174 156 QACGSMVTEEQPHAMLIPMEYFLMG 180 (227)
Q Consensus 156 ~~~gH~~~~e~p~~~~~~i~~fl~~ 180 (227)
+++||++++|+|+++++.|.+|+++
T Consensus 346 ~~~gH~~~~e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 346 PGAGHMPQMEAAADVNRLLAEFLGK 370 (371)
T ss_pred CCCCCChhhhCHHHHHHHHHHHhcc
Confidence 9999999999999999999999975
No 42
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.68 E-value=1.7e-15 Score=117.17 Aligned_cols=170 Identities=14% Similarity=0.096 Sum_probs=98.9
Q ss_pred CceecchhH-HHHHHHHHhcCCccceEEEecCCCCCCchhHHHHHHHhHHHHHhhccc---hhHHHHHHHHhhchhhcCC
Q 027174 1 MCMGVTAGA-YILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMC---GVVKELLLKRYFSKEVRGN 76 (227)
Q Consensus 1 IlvGhS~Gg-~ia~~~A~~~P~~V~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 76 (227)
+++|||||| .+++..+..+|+.+..+|+++..+..-+......... +..+...... ........+.+..-..
T Consensus 126 ~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~-i~~m~~~d~~~~~~~~rke~~~~l~~~~~--- 201 (315)
T KOG2382|consen 126 VLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYREL-IKAMIQLDLSIGVSRGRKEALKSLIEVGF--- 201 (315)
T ss_pred eecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHH-HHHHHhccccccccccHHHHHHHHHHHhc---
Confidence 479999999 8888899999999999999997774211111110111 1111100110 0001111111111000
Q ss_pred CCCCChHHHHHHHHHhcc----------cCchhHHHHHHHh--cCCCCCccccCcccccEEEEecCCCcccch--HHHHH
Q 027174 77 AQVPESDIVQACRRLLDE----------RQSSNVWHFLEAI--NGRPDISEGLRKLQCRSLIFVGESSPFHSE--AVHMT 142 (227)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~--~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~--~~~~~ 142 (227)
+..+.+.....+.. .+...+...+..+ .......+. .....||+++.|.++.+++. -..+.
T Consensus 202 ----d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~-~~~~~pvlfi~g~~S~fv~~~~~~~~~ 276 (315)
T KOG2382|consen 202 ----DNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLED-GPYTGPVLFIKGLQSKFVPDEHYPRME 276 (315)
T ss_pred ----chHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccc-cccccceeEEecCCCCCcChhHHHHHH
Confidence 22222333322220 1222333333331 111111112 56788999999999999843 34477
Q ss_pred hhhcCCCcEEEEecCCCCCCCccChHHHHHHHHHHHhhC
Q 027174 143 SKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 181 (227)
Q Consensus 143 ~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 181 (227)
+.+ |+++++.++++||++|.|+|++|.+.|.+|++..
T Consensus 277 ~~f--p~~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 277 KIF--PNVEVHELDEAGHWVHLEKPEEFIESISEFLEEP 313 (315)
T ss_pred Hhc--cchheeecccCCceeecCCHHHHHHHHHHHhccc
Confidence 888 8999999999999999999999999999999753
No 43
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.64 E-value=2.7e-15 Score=118.44 Aligned_cols=176 Identities=13% Similarity=0.077 Sum_probs=103.3
Q ss_pred CceecchhHHHHHHHHHhcCCccceEEEecCCCCCCchhHH-HHHHHhHHHHHhhccchhHHHHHHHHhhchhhcCCCCC
Q 027174 1 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEW-LYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQV 79 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (227)
+++||||||.|++.++.+++..|+++||.+|.......... ........ .............-...........
T Consensus 110 ~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~~~~~~~~~~~-----~~~~~~p~~~~~~~~~~~~~~~~~s 184 (298)
T COG2267 110 FLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGGAILRLILARLALK-----LLGRIRPKLPVDSNLLEGVLTDDLS 184 (298)
T ss_pred EEEEeCcHHHHHHHHHHhCCccccEEEEECccccCChhHHHHHHHHHhcc-----cccccccccccCcccccCcCcchhh
Confidence 58999999999999999999999999999999876541111 00111000 0000000000000000011111111
Q ss_pred CChHHHHHHHHHhccc-CchhHHHHHHHhcCCC-CCccccCcccccEEEEecCCCcccc---hHHHHHhhhcCCCcEEEE
Q 027174 80 PESDIVQACRRLLDER-QSSNVWHFLEAINGRP-DISEGLRKLQCRSLIFVGESSPFHS---EAVHMTSKIDRRYSALVE 154 (227)
Q Consensus 80 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~l~~i~~Pvlii~G~~D~~~~---~~~~~~~~~~~~~~~~~~ 154 (227)
.+++..+.|.+..... ......+......... ........+++|+|+++|++|.++. ...++.+....++.++.+
T Consensus 185 r~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~ 264 (298)
T COG2267 185 RDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQGGDDRVVDNVEGLARFFERAGSPDKELKV 264 (298)
T ss_pred cCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhccccccCCEEEEecCCCccccCcHHHHHHHHhcCCCCceEEe
Confidence 1556666665554322 2222222211111111 2223356789999999999999885 233355666668889999
Q ss_pred ecCCCCCCCccC-h--HHHHHHHHHHHhhC
Q 027174 155 VQACGSMVTEEQ-P--HAMLIPMEYFLMGY 181 (227)
Q Consensus 155 i~~~gH~~~~e~-p--~~~~~~i~~fl~~~ 181 (227)
++|+.|.++.|. . +++.+.+.+|+.+.
T Consensus 265 ~~g~~He~~~E~~~~r~~~~~~~~~~l~~~ 294 (298)
T COG2267 265 IPGAYHELLNEPDRAREEVLKDILAWLAEA 294 (298)
T ss_pred cCCcchhhhcCcchHHHHHHHHHHHHHHhh
Confidence 999999998875 4 67888999999875
No 44
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.63 E-value=4.2e-16 Score=111.99 Aligned_cols=157 Identities=11% Similarity=0.073 Sum_probs=99.5
Q ss_pred ceecchhHHHHHHHHHhcCCccceEEEecCCCCCCchhHHHHHHHhHHHHHhhccchhHHHHHHHHhhchhhcCCCCCCC
Q 027174 2 CMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPE 81 (227)
Q Consensus 2 lvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (227)
++|+|=||..|+..|+++++.|.+||+.++........... .+.+.+ . ..|....++.+...+ +++..
T Consensus 118 vlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma-~kgiRd-v--~kWs~r~R~P~e~~Y-g~e~f------- 185 (277)
T KOG2984|consen 118 VLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMA-FKGIRD-V--NKWSARGRQPYEDHY-GPETF------- 185 (277)
T ss_pred EeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHH-HhchHH-H--hhhhhhhcchHHHhc-CHHHH-------
Confidence 68999999999999999999999999999887643222111 111111 0 122222222222222 22211
Q ss_pred hHHHHHHHHHhcccCchhHHHHHHHhcCCCCCccccCcccccEEEEecCCCccc--chHHHHHhhhcCCCcEEEEecCCC
Q 027174 82 SDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACG 159 (227)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~g 159 (227)
...+.++. +. ...+..+....--+..+++++||++|++|+.|+++ +.+-.+.... +.++++++|.++
T Consensus 186 ---~~~wa~wv-----D~-v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~--~~a~~~~~peGk 254 (277)
T KOG2984|consen 186 ---RTQWAAWV-----DV-VDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLK--SLAKVEIHPEGK 254 (277)
T ss_pred ---HHHHHHHH-----HH-HHHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCCCccchhhhc--ccceEEEccCCC
Confidence 11111110 00 01111111111123457899999999999999998 4455566777 789999999999
Q ss_pred CCCCccChHHHHHHHHHHHhhC
Q 027174 160 SMVTEEQPHAMLIPMEYFLMGY 181 (227)
Q Consensus 160 H~~~~e~p~~~~~~i~~fl~~~ 181 (227)
|.+++..+++|+..+.+|+++.
T Consensus 255 Hn~hLrya~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 255 HNFHLRYAKEFNKLVLDFLKST 276 (277)
T ss_pred cceeeechHHHHHHHHHHHhcc
Confidence 9999999999999999999874
No 45
>PLN02511 hydrolase
Probab=99.60 E-value=9.6e-15 Score=119.79 Aligned_cols=69 Identities=13% Similarity=0.105 Sum_probs=56.7
Q ss_pred CCccccCcccccEEEEecCCCcccchH---HHHHhhhcCCCcEEEEecCCCCCCCccChHH------HHHHHHHHHhhCC
Q 027174 112 DISEGLRKLQCRSLIFVGESSPFHSEA---VHMTSKIDRRYSALVEVQACGSMVTEEQPHA------MLIPMEYFLMGYG 182 (227)
Q Consensus 112 ~~~~~l~~i~~Pvlii~G~~D~~~~~~---~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~------~~~~i~~fl~~~~ 182 (227)
+....+.+|++|+|+|+|++|++++.. ....+.. +++++++++++||+.++|+|+. +.+.+.+|++...
T Consensus 289 s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~~--p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~~ 366 (388)
T PLN02511 289 SSSDSIKHVRVPLLCIQAANDPIAPARGIPREDIKAN--PNCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEALE 366 (388)
T ss_pred CchhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhcC--CCEEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHHHH
Confidence 344568899999999999999988422 2355556 8999999999999999999976 5899999998763
No 46
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.60 E-value=4.1e-15 Score=121.79 Aligned_cols=67 Identities=4% Similarity=0.016 Sum_probs=56.3
Q ss_pred cccCcccccEEEEecCCCccc--chHHHHHhhhcCCCcEEEEecCCCCCCCcc-ChHHHHHHHHHHHhhC
Q 027174 115 EGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEE-QPHAMLIPMEYFLMGY 181 (227)
Q Consensus 115 ~~l~~i~~Pvlii~G~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e-~p~~~~~~i~~fl~~~ 181 (227)
..+.++++|+|+++|++|.++ ..++.+.+.+.+++.+++++++++|.++.| +++++.+.+.+||++.
T Consensus 318 ~~L~~I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~ 387 (395)
T PLN02652 318 RNFKSVTVPFMVLHGTADRVTDPLASQDLYNEAASRHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKR 387 (395)
T ss_pred hhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhcCCCCceEEEECCCeEEeccCCCHHHHHHHHHHHHHHH
Confidence 456788999999999999998 455667777644567899999999999777 7999999999999874
No 47
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.59 E-value=2.6e-15 Score=114.65 Aligned_cols=169 Identities=16% Similarity=0.114 Sum_probs=106.7
Q ss_pred ceecchhHHHHHHHHHhcCCccceEEEecCCCCCCchh--HHHHHHHhHHHHHhhccchhHHHHHHHHhh-chhh-cCCC
Q 027174 2 CMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWT--EWLYNKVMSNLLYYYGMCGVVKELLLKRYF-SKEV-RGNA 77 (227)
Q Consensus 2 lvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~ 77 (227)
+.||||||+|++.++.+.|+..+|+|+++|........ .+.... +...+ ..+...|. .+.. ....
T Consensus 133 L~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v~~-~l~~l----------~~liP~wk~vp~~d~~~~ 201 (313)
T KOG1455|consen 133 LFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPPVIS-ILTLL----------SKLIPTWKIVPTKDIIDV 201 (313)
T ss_pred eeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcHHHH-HHHHH----------HHhCCceeecCCcccccc
Confidence 68999999999999999999999999999987632221 111011 00000 00111110 0100 0001
Q ss_pred CCCChHHHHHHHHHhcc-cCchhHHHHHHHhcCCCCCccccCcccccEEEEecCCCccc--chHHHHHhhhcCCCcEEEE
Q 027174 78 QVPESDIVQACRRLLDE-RQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVE 154 (227)
Q Consensus 78 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~--~~~~~~~~~~~~~~~~~~~ 154 (227)
...+++..+..+..... .....+....+.+....++.+.+.++++|.+++||++|.++ ..++.+.+...+.+.++.+
T Consensus 202 ~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKl 281 (313)
T KOG1455|consen 202 AFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTVPFLILHGTDDKVTDPKVSKELYEKASSSDKTLKL 281 (313)
T ss_pred ccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccccccEEEEecCCCcccCcHHHHHHHHhccCCCCceec
Confidence 11144444444333222 23334444444444445666778999999999999999998 4566688888778889999
Q ss_pred ecCCCCCCCc----cChHHHHHHHHHHHhhC
Q 027174 155 VQACGSMVTE----EQPHAMLIPMEYFLMGY 181 (227)
Q Consensus 155 i~~~gH~~~~----e~p~~~~~~i~~fl~~~ 181 (227)
+||.-|.++. |+-+.|...|.+||++.
T Consensus 282 YpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 282 YPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred cccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 9999998875 33456777888999763
No 48
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.56 E-value=6.5e-14 Score=111.61 Aligned_cols=60 Identities=13% Similarity=0.098 Sum_probs=46.2
Q ss_pred ccCcc-cccEEEEecCCCccc--chHHHHHhhhcCCCcEEEEecCCCCCCCccChHHHHHHHHHHHhh
Q 027174 116 GLRKL-QCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 180 (227)
Q Consensus 116 ~l~~i-~~Pvlii~G~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 180 (227)
.+.++ ++|+++++|++|.++ ..+..+.+.+ +++++++++++||.++.+ +..+.|.+|+..
T Consensus 242 ~~~~i~~~P~lii~g~~D~~~p~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~---~~~~~i~~~~~~ 304 (306)
T TIGR01249 242 NISKIRNIPTYIVHGRYDLCCPLQSAWALHKAF--PEAELKVTNNAGHSAFDP---NNLAALVHALET 304 (306)
T ss_pred hhhhccCCCeEEEecCCCCCCCHHHHHHHHHhC--CCCEEEEECCCCCCCCCh---HHHHHHHHHHHH
Confidence 45566 699999999999988 4566688888 889999999999998733 344566666554
No 49
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.52 E-value=2.5e-13 Score=99.30 Aligned_cols=152 Identities=14% Similarity=0.243 Sum_probs=99.6
Q ss_pred ceecchhHHHHHHHHHhcCCccceEEEecCCCCCCchhHHHHHHHhHHHHHhhccchhHHHHHHHHhhchhhcCCCCCCC
Q 027174 2 CMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPE 81 (227)
Q Consensus 2 lvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (227)
++|.||||.+++.+|.++| ++++|.++++.....|...... ....+ .+ .+.+-.. +
T Consensus 89 v~GlSmGGv~alkla~~~p--~K~iv~m~a~~~~k~~~~iie~--~l~y~---------~~--~kk~e~k---------~ 144 (243)
T COG1647 89 VVGLSMGGVFALKLAYHYP--PKKIVPMCAPVNVKSWRIIIEG--LLEYF---------RN--AKKYEGK---------D 144 (243)
T ss_pred EEeecchhHHHHHHHhhCC--ccceeeecCCcccccchhhhHH--HHHHH---------HH--hhhccCC---------C
Confidence 6899999999999999999 9999999998876666544211 11111 00 0111011 3
Q ss_pred hHHHHHHHHHhcccCchhHHHHHHHhcCCCCCccccCcccccEEEEecCCCccc--chHHHHHhhhcCCCcEEEEecCCC
Q 027174 82 SDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACG 159 (227)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~g 159 (227)
.+..+.....+..........+...+ .+....+..|..|++++.|.+|+++ +.+..+...+.+.+-++.+++++|
T Consensus 145 ~e~~~~e~~~~~~~~~~~~~~~~~~i---~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~Sg 221 (243)
T COG1647 145 QEQIDKEMKSYKDTPMTTTAQLKKLI---KDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSG 221 (243)
T ss_pred HHHHHHHHHHhhcchHHHHHHHHHHH---HHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCC
Confidence 32233222233222222222222221 1244557789999999999999998 455667777766677899999999
Q ss_pred CCCCcc-ChHHHHHHHHHHHhh
Q 027174 160 SMVTEE-QPHAMLIPMEYFLMG 180 (227)
Q Consensus 160 H~~~~e-~p~~~~~~i~~fl~~ 180 (227)
|.+..+ +.+.+.+.+.+||++
T Consensus 222 HVIt~D~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 222 HVITLDKERDQVEEDVITFLEK 243 (243)
T ss_pred ceeecchhHHHHHHHHHHHhhC
Confidence 988765 578899999999974
No 50
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.49 E-value=2.1e-13 Score=109.75 Aligned_cols=59 Identities=12% Similarity=0.128 Sum_probs=49.5
Q ss_pred cccEEEEecCCCccc--chHHHHHhhhcCCCcEEEEecCCCCCCCccC-hHHHHHHHHHHHh
Q 027174 121 QCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQ-PHAMLIPMEYFLM 179 (227)
Q Consensus 121 ~~Pvlii~G~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~-p~~~~~~i~~fl~ 179 (227)
++|+|+++|++|.++ +.+..+.+.+..++.++.++++++|.++.|. ++++.+.+.+||+
T Consensus 270 ~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~~g~~H~i~~E~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 270 DIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTLEDMDHVITIEPGNEEVLKKIIEWIS 331 (332)
T ss_pred CCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEECCCCCCCccCCCHHHHHHHHHHHhh
Confidence 789999999999988 3455566665446789999999999999885 7889999999986
No 51
>PRK10985 putative hydrolase; Provisional
Probab=99.45 E-value=6.9e-13 Score=106.53 Aligned_cols=167 Identities=13% Similarity=0.086 Sum_probs=90.6
Q ss_pred CceecchhHHHHHHHHHhcCCc--cceEEEecCCCCCCchhHHHHHHHhHHHHHhhccchhHHHHH---HHHhhchhhcC
Q 027174 1 MCMGVTAGAYILTLFAMKYRHR--VLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELL---LKRYFSKEVRG 75 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~~--V~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 75 (227)
+++||||||.++..++.++++. +.++|+++++............. ...+....+.....+.. ...+.... .
T Consensus 134 ~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~~~--~~~~~~~~l~~~l~~~~~~~~~~~~~~~--~ 209 (324)
T PRK10985 134 AAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSYRMEQG--FSRVYQRYLLNLLKANAARKLAAYPGTL--P 209 (324)
T ss_pred EEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHHHHhhh--HHHHHHHHHHHHHHHHHHHHHHhccccc--c
Confidence 5799999999999999888754 89999998876532211111000 00011011111111100 11111100 0
Q ss_pred CCCCCChHH------HHHHHHHhccc--CchhHHHHHHHhcCCCCCccccCcccccEEEEecCCCcccc--hHHHHHhhh
Q 027174 76 NAQVPESDI------VQACRRLLDER--QSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS--EAVHMTSKI 145 (227)
Q Consensus 76 ~~~~~~~~~------~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~--~~~~~~~~~ 145 (227)
.+.+. ...+.+..... .-.....++.. .+..+.+.++++|+++|+|++|++++ ....+.+..
T Consensus 210 ----~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~~y~~----~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~ 281 (324)
T PRK10985 210 ----INLAQLKSVRRLREFDDLITARIHGFADAIDYYRQ----CSALPLLNQIRKPTLIIHAKDDPFMTHEVIPKPESLP 281 (324)
T ss_pred ----CCHHHHhcCCcHHHHhhhheeccCCCCCHHHHHHH----CChHHHHhCCCCCEEEEecCCCCCCChhhChHHHHhC
Confidence 01111 22222222111 11122222221 23345678999999999999999873 233355555
Q ss_pred cCCCcEEEEecCCCCCCCccCh-----HHHHHHHHHHHhhC
Q 027174 146 DRRYSALVEVQACGSMVTEEQP-----HAMLIPMEYFLMGY 181 (227)
Q Consensus 146 ~~~~~~~~~i~~~gH~~~~e~p-----~~~~~~i~~fl~~~ 181 (227)
++.++++++++||+.++|.. -..-+.+.+|++..
T Consensus 282 --~~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~~ 320 (324)
T PRK10985 282 --PNVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTTY 320 (324)
T ss_pred --CCeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHHh
Confidence 78899999999999999853 35666777888653
No 52
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.45 E-value=7.6e-13 Score=103.82 Aligned_cols=66 Identities=12% Similarity=0.116 Sum_probs=50.6
Q ss_pred cccCcccccEEEEecCCCcccchH-------HHHHhhhcCCCcEEEEecCCCCCCCccC-hHHHHHHHHHHHhh
Q 027174 115 EGLRKLQCRSLIFVGESSPFHSEA-------VHMTSKIDRRYSALVEVQACGSMVTEEQ-PHAMLIPMEYFLMG 180 (227)
Q Consensus 115 ~~l~~i~~Pvlii~G~~D~~~~~~-------~~~~~~~~~~~~~~~~i~~~gH~~~~e~-p~~~~~~i~~fl~~ 180 (227)
..+.++++|+++++|+.|...+.. ....+.+..++.+++.+++++|++..|. ++++.+.|.+||++
T Consensus 201 ~~l~~~~~P~ll~~g~~D~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~~ 274 (274)
T TIGR03100 201 AGLERFQGPVLFILSGNDLTAQEFADSVLGEPAWRGALEDPGIERVEIDGADHTFSDRVWREWVAARTTEWLRR 274 (274)
T ss_pred HHHHhcCCcEEEEEcCcchhHHHHHHHhccChhhHHHhhcCCeEEEecCCCCcccccHHHHHHHHHHHHHHHhC
Confidence 345677999999999999876322 2344444447889999999999996655 59999999999963
No 53
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.43 E-value=5.4e-12 Score=102.46 Aligned_cols=64 Identities=8% Similarity=0.073 Sum_probs=49.6
Q ss_pred ccCcccccEEEEecCCCccc--chHHHHHhhhcCCCcEEEEecCCCCCCCccCh---HHHHHHHHHHHhh
Q 027174 116 GLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQP---HAMLIPMEYFLMG 180 (227)
Q Consensus 116 ~l~~i~~Pvlii~G~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p---~~~~~~i~~fl~~ 180 (227)
.+.++++|+++++|++|.++ ..+..+.+.+.+++.++++++ +||+..+..+ +++...|.+|+++
T Consensus 281 ~l~~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 281 DLKNIKMPILNIYAERDHLVPPDASKALNDLVSSEDYTELSFP-GGHIGIYVSGKAQKEVPPAIGKWLQA 349 (350)
T ss_pred cHHhCCCCeEEEecCCCCcCCHHHHHHHHHHcCCCCeEEEEcC-CCCEEEEECchhHhhhhHHHHHHHHh
Confidence 36788999999999999987 345557777744455667776 8998877654 7899999999975
No 54
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.41 E-value=3.3e-12 Score=97.86 Aligned_cols=63 Identities=24% Similarity=0.390 Sum_probs=51.1
Q ss_pred cccCcccccEEEEecCCCcccch--HHHHHhhhcCCC-cEEEEecCCCCCCCccChHHHHHHHHHHHh
Q 027174 115 EGLRKLQCRSLIFVGESSPFHSE--AVHMTSKIDRRY-SALVEVQACGSMVTEEQPHAMLIPMEYFLM 179 (227)
Q Consensus 115 ~~l~~i~~Pvlii~G~~D~~~~~--~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 179 (227)
..+..+++|+++++|++|.+.+. ...+.... ++ .++.+++++||+++.|+|+.+++.+.+|++
T Consensus 215 ~~~~~~~~P~l~i~g~~d~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~~~ 280 (282)
T COG0596 215 AALARITVPTLIIHGEDDPVVPAELARRLAAAL--PNDARLVVIPGAGHFPHLEAPEAFAAALLAFLE 280 (282)
T ss_pred hhhccCCCCeEEEecCCCCcCCHHHHHHHHhhC--CCCceEEEeCCCCCcchhhcHHHHHHHHHHHHh
Confidence 44677889999999999955543 34466666 54 899999999999999999999999988554
No 55
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.40 E-value=9.8e-12 Score=102.74 Aligned_cols=140 Identities=15% Similarity=0.123 Sum_probs=85.7
Q ss_pred ceecchhHHHHHHHHHhcCCccceEEEecCCCCC-CchhHHHHHHHhHHHHHhhccchhHHHHHHHHhhchhhcCCCCCC
Q 027174 2 CMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA-PSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVP 80 (227)
Q Consensus 2 lvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (227)
++||||||.+|+.+|..+|++|+++|++++.... .....+. . .........+... ++....
T Consensus 269 l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~~~~~--~---------~~p~~~~~~la~~-lg~~~~------ 330 (414)
T PRK05077 269 AFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTDPKRQ--Q---------QVPEMYLDVLASR-LGMHDA------ 330 (414)
T ss_pred EEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhcchhhh--h---------hchHHHHHHHHHH-hCCCCC------
Confidence 7899999999999999999999999999887531 0111110 0 0000001111111 111000
Q ss_pred ChHHHHHHHHHhcccCchhHHHHHHHhcCCCCCcccc-CcccccEEEEecCCCcccc--hHHHHHhhhcCCCcEEEEecC
Q 027174 81 ESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGL-RKLQCRSLIFVGESSPFHS--EAVHMTSKIDRRYSALVEVQA 157 (227)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~i~~Pvlii~G~~D~~~~--~~~~~~~~~~~~~~~~~~i~~ 157 (227)
+.+ .+... +..+.. .....+ .++++|+|+++|++|++++ .+..+.+.. ++++++++++
T Consensus 331 ~~~---~l~~~------------l~~~sl--~~~~~l~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~--~~~~l~~i~~ 391 (414)
T PRK05077 331 SDE---ALRVE------------LNRYSL--KVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLIASSS--ADGKLLEIPF 391 (414)
T ss_pred ChH---HHHHH------------hhhccc--hhhhhhccCCCCcEEEEecCCCCCCCHHHHHHHHHhC--CCCeEEEccC
Confidence 111 11111 111000 000111 5689999999999999984 455567777 8899999998
Q ss_pred CCCCCCccChHHHHHHHHHHHhhC
Q 027174 158 CGSMVTEEQPHAMLIPMEYFLMGY 181 (227)
Q Consensus 158 ~gH~~~~e~p~~~~~~i~~fl~~~ 181 (227)
+ ++.+.++++++.+.+||++.
T Consensus 392 ~---~~~e~~~~~~~~i~~wL~~~ 412 (414)
T PRK05077 392 K---PVYRNFDKALQEISDWLEDR 412 (414)
T ss_pred C---CccCCHHHHHHHHHHHHHHH
Confidence 6 56689999999999999864
No 56
>PRK05855 short chain dehydrogenase; Validated
Probab=99.36 E-value=2.8e-12 Score=110.71 Aligned_cols=63 Identities=11% Similarity=0.135 Sum_probs=52.5
Q ss_pred cCcccccEEEEecCCCcccc--hHHHHHhhhcCCCcEEEEecCCCCCCCccChHHHHHHHHHHHhhCC
Q 027174 117 LRKLQCRSLIFVGESSPFHS--EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYG 182 (227)
Q Consensus 117 l~~i~~Pvlii~G~~D~~~~--~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 182 (227)
+..+++|+++|+|++|.+++ ....+.+.+ ++..+++++ +||++++|+|+++++.|.+|+++..
T Consensus 229 ~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~--~~~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~~~ 293 (582)
T PRK05855 229 ERYTDVPVQLIVPTGDPYVRPALYDDLSRWV--PRLWRREIK-AGHWLPMSHPQVLAAAVAEFVDAVE 293 (582)
T ss_pred cCCccCceEEEEeCCCcccCHHHhccccccC--CcceEEEcc-CCCcchhhChhHHHHHHHHHHHhcc
Confidence 45689999999999999984 333466666 677887775 7999999999999999999998854
No 57
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.33 E-value=5e-11 Score=108.71 Aligned_cols=66 Identities=12% Similarity=0.131 Sum_probs=54.7
Q ss_pred ccCcccccEEEEecCCCccc--chHHHHHhhhcCCCcEE-EEecCCCCCCCcc---ChHHHHHHHHHHHhhCCc
Q 027174 116 GLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSAL-VEVQACGSMVTEE---QPHAMLIPMEYFLMGYGL 183 (227)
Q Consensus 116 ~l~~i~~Pvlii~G~~D~~~--~~~~~~~~~~~~~~~~~-~~i~~~gH~~~~e---~p~~~~~~i~~fl~~~~~ 183 (227)
.+.+|++|+|+++|++|.++ ..++.+.+.+ +++++ ++++++||+.++- -++++...|.+||++.+.
T Consensus 292 ~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i--~~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~~~ 363 (994)
T PRK07868 292 TLADITCPVLAFVGEVDDIGQPASVRGIRRAA--PNAEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWLEG 363 (994)
T ss_pred chhhCCCCEEEEEeCCCCCCCHHHHHHHHHhC--CCCeEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHhcc
Confidence 47899999999999999998 3556688888 78887 6889999997763 578899999999998643
No 58
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.29 E-value=7.7e-11 Score=99.40 Aligned_cols=53 Identities=11% Similarity=0.105 Sum_probs=44.9
Q ss_pred cccCcccccEEEEecCCCccc--chHHHHHhhhcCCCcEEEEecCCCCCCCccChHH
Q 027174 115 EGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHA 169 (227)
Q Consensus 115 ~~l~~i~~Pvlii~G~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~ 169 (227)
..+.+|++|+++++|++|.++ ..+..+.+.+ ++.+..+++++||.+++++|..
T Consensus 409 ~dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i--~~~~~~vL~~sGHi~~ienPp~ 463 (532)
T TIGR01838 409 LDLSKVKVPVYIIATREDHIAPWQSAYRGAALL--GGPKTFVLGESGHIAGVVNPPS 463 (532)
T ss_pred cchhhCCCCEEEEeeCCCCcCCHHHHHHHHHHC--CCCEEEEECCCCCchHhhCCCC
Confidence 457899999999999999998 3455577888 7788899999999999998853
No 59
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.26 E-value=1.5e-10 Score=91.29 Aligned_cols=175 Identities=14% Similarity=0.092 Sum_probs=99.9
Q ss_pred ceecchhHHHHHHHHHhcCCccceEEEecCCCCCCchhHHHHHHHhHHHHHh-hcc----------c---hhHHH-----
Q 027174 2 CMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYY-YGM----------C---GVVKE----- 62 (227)
Q Consensus 2 lvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~~~~~~~~~~~~~~~~~~~~-~~~----------~---~~~~~----- 62 (227)
+||-||||+.|++|+..||++|+++|.+++......+..-+ +..+.+.+.. ..+ + -.+.+
T Consensus 151 vvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~~ia~-~~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~l 229 (368)
T COG2021 151 VVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQNIAF-NEVQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHL 229 (368)
T ss_pred eeccChHHHHHHHHHHhChHHHhhhheecccccCCHHHHHH-HHHHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHH
Confidence 79999999999999999999999999999887755443221 1222221111 011 0 00001
Q ss_pred -----HHHHHhhchhhcCCCCCC--ChHHHHHHHHHh----cccCch-hHHHHHHHhcCCCCC-------ccccCccccc
Q 027174 63 -----LLLKRYFSKEVRGNAQVP--ESDIVQACRRLL----DERQSS-NVWHFLEAINGRPDI-------SEGLRKLQCR 123 (227)
Q Consensus 63 -----~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~-------~~~l~~i~~P 123 (227)
..+..-|+.......... ....++.|.+.. ...... .+....++ .+..|. .+.|.++++|
T Consensus 230 tYrS~~~~~~rF~r~~~~~~~~~~~~~f~vESYL~~qg~kf~~rfDaNsYL~lt~a-ld~~D~s~~~~~l~~al~~i~~~ 308 (368)
T COG2021 230 TYRSEEELDERFGRRLQADPLRGGGVRFAVESYLDYQGDKFVARFDANSYLYLTRA-LDYHDVSRGRGDLTAALARIKAP 308 (368)
T ss_pred HccCHHHHHHHhcccccccccCCCchhHHHHHHHHHHHHHHHhccCcchHHHHHHH-HHhcCCCCCcCcHHHHHhcCccC
Confidence 111111222110000000 012233333221 112122 22222222 222333 3348899999
Q ss_pred EEEEecCCCcccc--hHHHHHhhhcCCCcE-EEEe-cCCCCCCCccChHHHHHHHHHHHhh
Q 027174 124 SLIFVGESSPFHS--EAVHMTSKIDRRYSA-LVEV-QACGSMVTEEQPHAMLIPMEYFLMG 180 (227)
Q Consensus 124 vlii~G~~D~~~~--~~~~~~~~~~~~~~~-~~~i-~~~gH~~~~e~p~~~~~~i~~fl~~ 180 (227)
++++.-+.|.+++ ..+++.+.+ +.+. +++| ...||.-++...+.+...|..||+.
T Consensus 309 ~lv~gi~sD~lfp~~~~~~~~~~L--~~~~~~~~i~S~~GHDaFL~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 309 VLVVGITSDWLFPPELQRALAEAL--PAAGALREIDSPYGHDAFLVESEAVGPLIRKFLAL 367 (368)
T ss_pred EEEEEecccccCCHHHHHHHHHhc--cccCceEEecCCCCchhhhcchhhhhHHHHHHhhc
Confidence 9999999999984 555577888 4444 6555 4679999999999999999999975
No 60
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.24 E-value=1.7e-10 Score=86.24 Aligned_cols=152 Identities=14% Similarity=0.105 Sum_probs=89.4
Q ss_pred ceecchhHHHHHHHHHhcCC---ccceEEEecCCCCCCchhHHHHHHHhHHHHHhhccchhHHHHHHHHhhch-hhcCCC
Q 027174 2 CMGVTAGAYILTLFAMKYRH---RVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSK-EVRGNA 77 (227)
Q Consensus 2 lvGhS~Gg~ia~~~A~~~P~---~V~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 77 (227)
++||||||++|.++|.+.-. ....+.+.+..+......... .. ..-... .+.+...-..+ ....
T Consensus 78 lfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i-~~--------~~D~~~-l~~l~~lgG~p~e~le-- 145 (244)
T COG3208 78 LFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQI-HH--------LDDADF-LADLVDLGGTPPELLE-- 145 (244)
T ss_pred ecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCc-cC--------CCHHHH-HHHHHHhCCCChHHhc--
Confidence 68999999999999987532 367777777554411110000 00 000001 11111111111 1111
Q ss_pred CCCChHHHHHHHHHhcccCchhHHHHHHHhcCCCCCccccCcccccEEEEecCCCccc--chHHHHHhhhcCCCcEEEEe
Q 027174 78 QVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEV 155 (227)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~--~~~~~~~~~~~~~~~~~~~i 155 (227)
++++.+.+...++. + ......|.. .. -..+.||+.++.|++|..+ +....+.+... ...+++++
T Consensus 146 ---d~El~~l~LPilRA----D-~~~~e~Y~~----~~-~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~-~~f~l~~f 211 (244)
T COG3208 146 ---DPELMALFLPILRA----D-FRALESYRY----PP-PAPLACPIHAFGGEKDHEVSRDELGAWREHTK-GDFTLRVF 211 (244)
T ss_pred ---CHHHHHHHHHHHHH----H-HHHhccccc----CC-CCCcCcceEEeccCcchhccHHHHHHHHHhhc-CCceEEEe
Confidence 55555555433221 0 111222211 11 1578999999999999988 55565777774 47889999
Q ss_pred cCCCCCCCccChHHHHHHHHHHHhh
Q 027174 156 QACGSMVTEEQPHAMLIPMEYFLMG 180 (227)
Q Consensus 156 ~~~gH~~~~e~p~~~~~~i~~fl~~ 180 (227)
+ +|||...++.+++.+.|.+.++.
T Consensus 212 d-GgHFfl~~~~~~v~~~i~~~l~~ 235 (244)
T COG3208 212 D-GGHFFLNQQREEVLARLEQHLAH 235 (244)
T ss_pred c-CcceehhhhHHHHHHHHHHHhhh
Confidence 7 89999999999999999999863
No 61
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.20 E-value=8.5e-10 Score=83.34 Aligned_cols=135 Identities=16% Similarity=0.174 Sum_probs=81.4
Q ss_pred ceecchhHHHHHHHHHhcCCccceEEEecCCCCCCchhHHHHHHHhHHHHHhhccchhHHHHHHHHhhchhhcCCCCCCC
Q 027174 2 CMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPE 81 (227)
Q Consensus 2 lvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (227)
++|||+||.+++.++.++|+++++++..++........... .. . .......+ .... . .
T Consensus 68 i~G~S~GG~~a~~~~~~~~~~f~a~v~~~g~~d~~~~~~~~------------~~--~-~~~~~~~~-~~~~-~-----~ 125 (213)
T PF00326_consen 68 IMGHSYGGYLALLAATQHPDRFKAAVAGAGVSDLFSYYGTT------------DI--Y-TKAEYLEY-GDPW-D-----N 125 (213)
T ss_dssp EEEETHHHHHHHHHHHHTCCGSSEEEEESE-SSTTCSBHHT------------CC--H-HHGHHHHH-SSTT-T-----S
T ss_pred EEcccccccccchhhcccceeeeeeeccceecchhcccccc------------cc--c-cccccccc-Cccc-h-----h
Confidence 68999999999999999999999999998876533222210 00 0 00000011 1000 0 1
Q ss_pred hHHHHHHHHHhcccCchhHHHHHHHhcCCCCCccccCc--ccccEEEEecCCCccc--chHHHHHhhhc--CCCcEEEEe
Q 027174 82 SDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRK--LQCRSLIFVGESSPFH--SEAVHMTSKID--RRYSALVEV 155 (227)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--i~~Pvlii~G~~D~~~--~~~~~~~~~~~--~~~~~~~~i 155 (227)
.+..+.. ..+ ..+.+ +++|+|+++|++|..+ ..+..+.+.+. +.+.++.++
T Consensus 126 ~~~~~~~----------------s~~-------~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~ 182 (213)
T PF00326_consen 126 PEFYREL----------------SPI-------SPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIF 182 (213)
T ss_dssp HHHHHHH----------------HHG-------GGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEE
T ss_pred hhhhhhh----------------ccc-------cccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEc
Confidence 1111111 110 00122 7899999999999988 44555555443 145899999
Q ss_pred cCCCCCCC-ccChHHHHHHHHHHHhhC
Q 027174 156 QACGSMVT-EEQPHAMLIPMEYFLMGY 181 (227)
Q Consensus 156 ~~~gH~~~-~e~p~~~~~~i~~fl~~~ 181 (227)
|++||.+. .+......+.+.+|+++.
T Consensus 183 p~~gH~~~~~~~~~~~~~~~~~f~~~~ 209 (213)
T PF00326_consen 183 PGEGHGFGNPENRRDWYERILDFFDKY 209 (213)
T ss_dssp TT-SSSTTSHHHHHHHHHHHHHHHHHH
T ss_pred CcCCCCCCCchhHHHHHHHHHHHHHHH
Confidence 99999555 455567888999999874
No 62
>PLN02872 triacylglycerol lipase
Probab=99.19 E-value=4e-10 Score=92.37 Aligned_cols=63 Identities=11% Similarity=0.187 Sum_probs=52.0
Q ss_pred cCcc--cccEEEEecCCCccc--chHHHHHhhhcCCC-cEEEEecCCCCC---CCccChHHHHHHHHHHHhhC
Q 027174 117 LRKL--QCRSLIFVGESSPFH--SEAVHMTSKIDRRY-SALVEVQACGSM---VTEEQPHAMLIPMEYFLMGY 181 (227)
Q Consensus 117 l~~i--~~Pvlii~G~~D~~~--~~~~~~~~~~~~~~-~~~~~i~~~gH~---~~~e~p~~~~~~i~~fl~~~ 181 (227)
+.++ ++|+++++|++|.++ ..+..+.+.+ ++ .+++.++++||. ...|.|+++.+.|.+|+++.
T Consensus 319 l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~L--p~~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~ 389 (395)
T PLN02872 319 LSLIPKSLPLWMGYGGTDGLADVTDVEHTLAEL--PSKPELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSL 389 (395)
T ss_pred cccCCCCccEEEEEcCCCCCCCHHHHHHHHHHC--CCccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHh
Confidence 5666 589999999999998 4556677777 44 688899999995 55689999999999999864
No 63
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.11 E-value=4.3e-11 Score=90.57 Aligned_cols=177 Identities=14% Similarity=0.207 Sum_probs=93.3
Q ss_pred CceecchhHHHHHHHHHh--cCCccceEEEecCCCCCCchhHHHHHHHhHHHHHhh-ccchhHHHHHHHHhhchhhcCC-
Q 027174 1 MCMGVTAGAYILTLFAMK--YRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYY-GMCGVVKELLLKRYFSKEVRGN- 76 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~--~P~~V~~lili~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~- 76 (227)
|+|||||||.||.+.|.. -|. +.|++.+|-.-.. ... +...+..++... .....+.+...+...+......
T Consensus 149 ilVGHSmGGaIav~~a~~k~lps-l~Gl~viDVVEgt---Ame-AL~~m~~fL~~rP~~F~Si~~Ai~W~v~sg~~Rn~~ 223 (343)
T KOG2564|consen 149 ILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDVVEGT---AME-ALNSMQHFLRNRPKSFKSIEDAIEWHVRSGQLRNRD 223 (343)
T ss_pred EEEeccccchhhhhhhhhhhchh-hhceEEEEEechH---HHH-HHHHHHHHHhcCCccccchhhHHHHHhccccccccc
Confidence 689999999999988875 456 8999999865331 111 111122222111 1122223333222222111110
Q ss_pred -CCCCChHHHHHHHH---HhcccCchhHHHHHHHhcCCCCCccccCcccccEEEEecCCCcccchHHHHHhhhcCCCcEE
Q 027174 77 -AQVPESDIVQACRR---LLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHSEAVHMTSKIDRRYSAL 152 (227)
Q Consensus 77 -~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~ 152 (227)
++..-+..+..... ............++..++ .++.+.+-.+.+|-++|-+..|.+-....- ..++ -..++
T Consensus 224 SArVsmP~~~~~~~eGh~yvwrtdL~kte~YW~gWF--~gLS~~Fl~~p~~klLilAg~d~LDkdLti--GQMQ-Gk~Q~ 298 (343)
T KOG2564|consen 224 SARVSMPSQLKQCEEGHCYVWRTDLEKTEQYWKGWF--KGLSDKFLGLPVPKLLILAGVDRLDKDLTI--GQMQ-GKFQL 298 (343)
T ss_pred cceEecchheeeccCCCcEEEEeeccccchhHHHHH--hhhhhHhhCCCccceeEEecccccCcceee--eeec-cceee
Confidence 00000000111100 001111111122222221 234455667788888888888876432211 1121 23578
Q ss_pred EEecCCCCCCCccChHHHHHHHHHHHhhCCcccCC
Q 027174 153 VEVQACGSMVTEEQPHAMLIPMEYFLMGYGLYRPT 187 (227)
Q Consensus 153 ~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~~~~~~ 187 (227)
.+++.+||+++.+.|.+++..+..|+.++....+.
T Consensus 299 ~vL~~~GH~v~ED~P~kva~~~~~f~~Rn~~~~~~ 333 (343)
T KOG2564|consen 299 QVLPLCGHFVHEDSPHKVAECLCVFWIRNRFAEPK 333 (343)
T ss_pred eeecccCceeccCCcchHHHHHHHHHhhhcccccc
Confidence 99999999999999999999999999998765544
No 64
>PRK10566 esterase; Provisional
Probab=99.07 E-value=2.6e-09 Score=82.52 Aligned_cols=60 Identities=17% Similarity=0.199 Sum_probs=44.6
Q ss_pred cCcc-cccEEEEecCCCccc--chHHHHHhhhcCC----CcEEEEecCCCCCCCccChHHHHHHHHHHHhh
Q 027174 117 LRKL-QCRSLIFVGESSPFH--SEAVHMTSKIDRR----YSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 180 (227)
Q Consensus 117 l~~i-~~Pvlii~G~~D~~~--~~~~~~~~~~~~~----~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 180 (227)
+.++ ++|+|+++|++|.++ ..+..+.+.+... +.++.+++++||.+. + ...+.+.+||++
T Consensus 181 ~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~~---~-~~~~~~~~fl~~ 247 (249)
T PRK10566 181 LEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHRIT---P-EALDAGVAFFRQ 247 (249)
T ss_pred hhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCccC---H-HHHHHHHHHHHh
Confidence 4555 689999999999998 3555566666322 357788999999864 3 456888999985
No 65
>PRK13604 luxD acyl transferase; Provisional
Probab=99.03 E-value=8.3e-10 Score=86.55 Aligned_cols=50 Identities=14% Similarity=0.236 Sum_probs=40.2
Q ss_pred cCcccccEEEEecCCCccc--chHHHHHhhhcCCCcEEEEecCCCCCCCccCh
Q 027174 117 LRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQP 167 (227)
Q Consensus 117 l~~i~~Pvlii~G~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p 167 (227)
..++++|+|+|+|+.|.++ ..+..+.+.+.+.+.+++.++|++|.+. |++
T Consensus 198 ~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~l~-~~~ 249 (307)
T PRK13604 198 MKGLDIPFIAFTANNDSWVKQSEVIDLLDSIRSEQCKLYSLIGSSHDLG-ENL 249 (307)
T ss_pred HhhcCCCEEEEEcCCCCccCHHHHHHHHHHhccCCcEEEEeCCCccccC-cch
Confidence 4567899999999999998 4566677777445789999999999965 444
No 66
>PRK11071 esterase YqiA; Provisional
Probab=99.01 E-value=2.7e-09 Score=79.15 Aligned_cols=53 Identities=8% Similarity=-0.087 Sum_probs=41.3
Q ss_pred ccccEEEEecCCCcccc--hHHHHHhhhcCCCcEEEEecCCCCCCCccChHHHHHHHHHHHh
Q 027174 120 LQCRSLIFVGESSPFHS--EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLM 179 (227)
Q Consensus 120 i~~Pvlii~G~~D~~~~--~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 179 (227)
..+|+++++|++|.+++ .+..+.+ +++.++++|++|.+ ...+++.+.+.+|++
T Consensus 135 ~~~~v~iihg~~De~V~~~~a~~~~~-----~~~~~~~~ggdH~f--~~~~~~~~~i~~fl~ 189 (190)
T PRK11071 135 SPDLIWLLQQTGDEVLDYRQAVAYYA-----ACRQTVEEGGNHAF--VGFERYFNQIVDFLG 189 (190)
T ss_pred ChhhEEEEEeCCCCcCCHHHHHHHHH-----hcceEEECCCCcch--hhHHHhHHHHHHHhc
Confidence 67889999999999984 3444444 34677889999987 445889999999975
No 67
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=98.93 E-value=2.1e-09 Score=75.82 Aligned_cols=80 Identities=21% Similarity=0.353 Sum_probs=59.7
Q ss_pred CceecchhHHHHHHHHHhcCCccceEEEecCCCCCCchhHHHHHHHhHHHHHhhccchhHHHHHHHHhhchhhcCCCCCC
Q 027174 1 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVP 80 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (227)
+++|||+||.+++.++.++ .+|+++|++++.+. ...
T Consensus 64 ~l~G~S~Gg~~a~~~~~~~-~~v~~~v~~~~~~~---~~~---------------------------------------- 99 (145)
T PF12695_consen 64 ILIGHSMGGAIAANLAARN-PRVKAVVLLSPYPD---SED---------------------------------------- 99 (145)
T ss_dssp EEEEETHHHHHHHHHHHHS-TTESEEEEESESSG---CHH----------------------------------------
T ss_pred EEEEEccCcHHHHHHhhhc-cceeEEEEecCccc---hhh----------------------------------------
Confidence 4799999999999999999 89999999998200 000
Q ss_pred ChHHHHHHHHHhcccCchhHHHHHHHhcCCCCCccccCcccccEEEEecCCCccc--chHHHHHhhhcCCCcEEEEecCC
Q 027174 81 ESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQAC 158 (227)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~ 158 (227)
+...++|+++++|++|..+ +....+.+.+. .+.++++++++
T Consensus 100 ------------------------------------~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~i~g~ 142 (145)
T PF12695_consen 100 ------------------------------------LAKIRIPVLFIHGENDPLVPPEQVRRLYEALP-GPKELYIIPGA 142 (145)
T ss_dssp ------------------------------------HTTTTSEEEEEEETT-SSSHHHHHHHHHHHHC-SSEEEEEETTS
T ss_pred ------------------------------------hhccCCcEEEEEECCCCcCCHHHHHHHHHHcC-CCcEEEEeCCC
Confidence 0011229999999999998 45555777774 46899999999
Q ss_pred CCC
Q 027174 159 GSM 161 (227)
Q Consensus 159 gH~ 161 (227)
+|+
T Consensus 143 ~H~ 145 (145)
T PF12695_consen 143 GHF 145 (145)
T ss_dssp -TT
T ss_pred cCc
Confidence 996
No 68
>PRK11460 putative hydrolase; Provisional
Probab=98.87 E-value=1.6e-08 Score=77.42 Aligned_cols=58 Identities=16% Similarity=0.131 Sum_probs=40.8
Q ss_pred cccEEEEecCCCcccc--hHHHHHhhhc--CCCcEEEEecCCCCCCCccChHHHHHHHHHHH
Q 027174 121 QCRSLIFVGESSPFHS--EAVHMTSKID--RRYSALVEVQACGSMVTEEQPHAMLIPMEYFL 178 (227)
Q Consensus 121 ~~Pvlii~G~~D~~~~--~~~~~~~~~~--~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 178 (227)
+.|+++++|++|++++ .+..+.+.+. +.+++++.++++||.+..+.-+.+.+.+.+++
T Consensus 148 ~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~~~~~~~~~~~l~~~l 209 (232)
T PRK11460 148 ATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAIDPRLMQFALDRLRYTV 209 (232)
T ss_pred CCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCHHHHHHHHHHHHHHc
Confidence 5699999999999983 4555555553 13567888999999987555555555555554
No 69
>PLN02442 S-formylglutathione hydrolase
Probab=98.86 E-value=3.6e-08 Score=77.73 Aligned_cols=34 Identities=12% Similarity=0.155 Sum_probs=30.9
Q ss_pred CceecchhHHHHHHHHHhcCCccceEEEecCCCC
Q 027174 1 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 34 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~ 34 (227)
+++||||||..|+.+|.++|+++++++.+++...
T Consensus 146 ~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~ 179 (283)
T PLN02442 146 SIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIAN 179 (283)
T ss_pred EEEEEChhHHHHHHHHHhCchhEEEEEEECCccC
Confidence 4789999999999999999999999999988654
No 70
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.83 E-value=4.2e-09 Score=79.38 Aligned_cols=118 Identities=17% Similarity=0.215 Sum_probs=81.4
Q ss_pred CceecchhHHHHHHHHHhcCCccceEEEecCCCCCCchhHHHHHHHhHHHHHhhccchhHHHHHHHHhhchhhcCCCCCC
Q 027174 1 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVP 80 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (227)
|+.|+|||...++.+|+++| ++++||.+|.... . +. + .........
T Consensus 133 il~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~--~------rv----~-------------~~~~~~~~~------- 178 (258)
T KOG1552|consen 133 ILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTSG--M------RV----A-------------FPDTKTTYC------- 178 (258)
T ss_pred EEEEecCCchhhhhHhhcCC--cceEEEeccchhh--h------hh----h-------------ccCcceEEe-------
Confidence 68999999999999999999 9999999886431 0 00 0 000000000
Q ss_pred ChHHHHHHHHHhcccCchhHHHHHHHhcCCCCCccccCcccccEEEEecCCCccc--chHHHHHhhhcCCCcEEEEecCC
Q 027174 81 ESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQAC 158 (227)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~ 158 (227)
.+.| ...+....++||+|+++|++|.++ .....+.+... ...+-.++.|+
T Consensus 179 ----~d~f-----------------------~~i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k-~~~epl~v~g~ 230 (258)
T KOG1552|consen 179 ----FDAF-----------------------PNIEKISKITCPVLIIHGTDDEVVDFSHGKALYERCK-EKVEPLWVKGA 230 (258)
T ss_pred ----eccc-----------------------cccCcceeccCCEEEEecccCceecccccHHHHHhcc-ccCCCcEEecC
Confidence 0000 003456788999999999999998 45566777773 22477888899
Q ss_pred CCCCCccChHHHHHHHHHHHhhC
Q 027174 159 GSMVTEEQPHAMLIPMEYFLMGY 181 (227)
Q Consensus 159 gH~~~~e~p~~~~~~i~~fl~~~ 181 (227)
||. ..|...++.+.+.+|+...
T Consensus 231 gH~-~~~~~~~yi~~l~~f~~~~ 252 (258)
T KOG1552|consen 231 GHN-DIELYPEYIEHLRRFISSV 252 (258)
T ss_pred CCc-ccccCHHHHHHHHHHHHHh
Confidence 998 4566667889999998764
No 71
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=98.74 E-value=4.7e-08 Score=71.64 Aligned_cols=57 Identities=19% Similarity=0.205 Sum_probs=44.9
Q ss_pred ccccEEEEecCCCccc--chHHHHHhhhcCCCcEEEEecCCCCCCCccChHHHHHHHHHHHh
Q 027174 120 LQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLM 179 (227)
Q Consensus 120 i~~Pvlii~G~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 179 (227)
.+||||-++|..|.++ +++.++++.+ |+-++++++|+.|.....+ ...+....+|.+
T Consensus 198 ~~C~VLTvhGs~D~IVPve~AkefAk~i--~nH~L~iIEgADHnyt~~q-~~l~~lgl~f~k 256 (269)
T KOG4667|consen 198 KQCRVLTVHGSEDEIVPVEDAKEFAKII--PNHKLEIIEGADHNYTGHQ-SQLVSLGLEFIK 256 (269)
T ss_pred ccCceEEEeccCCceeechhHHHHHHhc--cCCceEEecCCCcCccchh-hhHhhhcceeEE
Confidence 4799999999999998 6888899999 8899999999999865433 344444555543
No 72
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=98.68 E-value=6.8e-07 Score=73.12 Aligned_cols=65 Identities=9% Similarity=0.006 Sum_probs=47.6
Q ss_pred ccCccc-ccEEEEecCCCcccc--hHHHHHhh---hcCCCcEEEEecCCCCCCCcc---ChHHHHHHHHHHHhh
Q 027174 116 GLRKLQ-CRSLIFVGESSPFHS--EAVHMTSK---IDRRYSALVEVQACGSMVTEE---QPHAMLIPMEYFLMG 180 (227)
Q Consensus 116 ~l~~i~-~Pvlii~G~~D~~~~--~~~~~~~~---~~~~~~~~~~i~~~gH~~~~e---~p~~~~~~i~~fl~~ 180 (227)
.+.+|+ +|++.+.|+.|.+++ ......+. +.+.+.+.+..+++||+-.+- -.+++...|.+||.+
T Consensus 332 dl~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~ 405 (406)
T TIGR01849 332 DPGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREFIRR 405 (406)
T ss_pred cHHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHHHHh
Confidence 378899 999999999999983 33334444 443445577777999976553 356788899999975
No 73
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=98.59 E-value=4.6e-07 Score=65.85 Aligned_cols=102 Identities=12% Similarity=0.168 Sum_probs=67.0
Q ss_pred CceecchhHHHHHHHH-HhcCCccceEEEecCCCCCCchhHHHHHHHhHHHHHhhccchhHHHHHHHHhhchhhcCCCCC
Q 027174 1 MCMGVTAGAYILTLFA-MKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQV 79 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A-~~~P~~V~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (227)
|+||||+|+..+++|+ .....+|.+++|++++... .. .. .......
T Consensus 58 ilVaHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~~----~~------------~~--------------~~~~~~~--- 104 (171)
T PF06821_consen 58 ILVAHSLGCLTALRWLAEQSQKKVAGALLVAPFDPD----DP------------EP--------------FPPELDG--- 104 (171)
T ss_dssp EEEEETHHHHHHHHHHHHTCCSSEEEEEEES--SCG----CH------------HC--------------CTCGGCC---
T ss_pred EEEEeCHHHHHHHHHHhhcccccccEEEEEcCCCcc----cc------------cc--------------hhhhccc---
Confidence 6899999999999999 7788899999999987432 00 00 0000000
Q ss_pred CChHHHHHHHHHhcccCchhHHHHHHHhcCCCCCccccCcccccEEEEecCCCccc--chHHHHHhhhcCCCcEEEEecC
Q 027174 80 PESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQA 157 (227)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~--~~~~~~~~~~~~~~~~~~~i~~ 157 (227)
+ ... ....+.+|.+++.+++|+++ +.++.+++.+ +++++.+++
T Consensus 105 ----------------------------f--~~~--p~~~l~~~~~viaS~nDp~vp~~~a~~~A~~l---~a~~~~~~~ 149 (171)
T PF06821_consen 105 ----------------------------F--TPL--PRDPLPFPSIVIASDNDPYVPFERAQRLAQRL---GAELIILGG 149 (171)
T ss_dssp ----------------------------C--TTS--HCCHHHCCEEEEEETTBSSS-HHHHHHHHHHH---T-EEEEETS
T ss_pred ----------------------------c--ccC--cccccCCCeEEEEcCCCCccCHHHHHHHHHHc---CCCeEECCC
Confidence 0 000 01234567799999999998 5667799999 589999999
Q ss_pred CCCCCCccChHHH
Q 027174 158 CGSMVTEEQPHAM 170 (227)
Q Consensus 158 ~gH~~~~e~p~~~ 170 (227)
+||+...+.=..+
T Consensus 150 ~GHf~~~~G~~~~ 162 (171)
T PF06821_consen 150 GGHFNAASGFGPW 162 (171)
T ss_dssp -TTSSGGGTHSS-
T ss_pred CCCcccccCCCch
Confidence 9999876544333
No 74
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=98.57 E-value=1e-06 Score=71.23 Aligned_cols=173 Identities=16% Similarity=0.161 Sum_probs=89.9
Q ss_pred ceecchhHHHHHHHHHhcCC---ccceEEEecCCCCCCchhHHHHHHHhHHHHHhhccchhHHHHHHHH---hhchhhcC
Q 027174 2 CMGVTAGAYILTLFAMKYRH---RVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKR---YFSKEVRG 75 (227)
Q Consensus 2 lvGhS~Gg~ia~~~A~~~P~---~V~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 75 (227)
.+|.||||++.+.|..+-.+ .+.++++++|+-.... .+...+...+.+....+...+.+....+ ++.... .
T Consensus 202 avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~--~~~~~~~~~~~~y~~~l~~~l~~~~~~~r~~~~~~~v-d 278 (409)
T KOG1838|consen 202 AVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAA--SRSIETPLYRRFYNRALTLNLKRIVLRHRHTLFEDPV-D 278 (409)
T ss_pred EEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhh--hhHHhcccchHHHHHHHHHhHHHHHhhhhhhhhhccc-h
Confidence 58999999999999987654 4667777777643200 0100111111111111111111111110 111100 0
Q ss_pred CCCCCChHHHHHHHHHhcc--cCchhHHHHHHHhcCCCCCccccCcccccEEEEecCCCcccc-hHHHHHhhhcCCCcEE
Q 027174 76 NAQVPESDIVQACRRLLDE--RQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS-EAVHMTSKIDRRYSAL 152 (227)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~-~~~~~~~~~~~~~~~~ 152 (227)
........-++++.+.+.. .+-.....++. .......+.+|++|+++|++.+|++++ .+.-......+|+.-+
T Consensus 279 ~d~~~~~~SvreFD~~~t~~~~gf~~~deYY~----~aSs~~~v~~I~VP~L~ina~DDPv~p~~~ip~~~~~~np~v~l 354 (409)
T KOG1838|consen 279 FDVILKSRSVREFDEALTRPMFGFKSVDEYYK----KASSSNYVDKIKVPLLCINAADDPVVPEEAIPIDDIKSNPNVLL 354 (409)
T ss_pred hhhhhhcCcHHHHHhhhhhhhcCCCcHHHHHh----hcchhhhcccccccEEEEecCCCCCCCcccCCHHHHhcCCcEEE
Confidence 0000011123333333221 12222222222 334456688999999999999999984 3444444455588888
Q ss_pred EEecCCCCCCCccC----hHHHHHH-HHHHHhhC
Q 027174 153 VEVQACGSMVTEEQ----PHAMLIP-MEYFLMGY 181 (227)
Q Consensus 153 ~~i~~~gH~~~~e~----p~~~~~~-i~~fl~~~ 181 (227)
.+-..+||.-++|. +....+. +.+|+...
T Consensus 355 ~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~~ 388 (409)
T KOG1838|consen 355 VITSHGGHLGFLEGLWPSARTWMDKLLVEFLGNA 388 (409)
T ss_pred EEeCCCceeeeeccCCCccchhHHHHHHHHHHHH
Confidence 88899999988887 2333333 67777653
No 75
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=98.54 E-value=2e-06 Score=66.12 Aligned_cols=160 Identities=14% Similarity=0.148 Sum_probs=82.9
Q ss_pred CceecchhHHHHHHHHHhcCCccceEEEecCCCCCCc--hhHHHHHHHhHHHHHhhccchhHHHHHHHHhhchhhcCCCC
Q 027174 1 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPS--WTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQ 78 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (227)
|.+|||.|+-.|+.+|..+| +.|+++++|...... -... .+...+..+.. -....+.+.+...++..-..+.
T Consensus 107 i~~gHSrGcenal~la~~~~--~~g~~lin~~G~r~HkgIrp~-~r~~~i~~l~~-~lp~~~~~~i~~~~y~~iG~KV-- 180 (297)
T PF06342_consen 107 IFLGHSRGCENALQLAVTHP--LHGLVLINPPGLRPHKGIRPL-SRMETINYLYD-LLPRFIINAIMYFYYRMIGFKV-- 180 (297)
T ss_pred EEEEeccchHHHHHHHhcCc--cceEEEecCCccccccCcCHH-HHHHHHHHHHH-HhhHHHHHHHHHHHHHHhCeee--
Confidence 57899999999999999996 679999998775322 1111 01111222211 1222333333333322111110
Q ss_pred CCC-hHHHHHHHHHhcccCchhHHHHHHHhcCCCCCccccCcccccEEEEecCCCcccc--hHHHHHh------------
Q 027174 79 VPE-SDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS--EAVHMTS------------ 143 (227)
Q Consensus 79 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~--~~~~~~~------------ 143 (227)
.+ .+....++... .-.+..... .-+.+.+-++|+++.+|.+|.+++ ...+++.
T Consensus 181 -~~GeeA~na~r~m~----~~df~~q~~-------~I~~ln~~~ikvli~ygg~DhLIEeeI~~E~a~~f~~l~Hf~~~~ 248 (297)
T PF06342_consen 181 -SDGEEAINAMRSMQ----NCDFEEQKE-------YIDKLNKKPIKVLIAYGGKDHLIEEEISFEFAMKFKGLDHFNIEK 248 (297)
T ss_pred -cChHHHHHHHHHHH----hcCHHHHHH-------HHHHhccCCCcEEEEEcCcchhhHHHHHHHHHHHhCCccceeeec
Confidence 01 12222222111 111111111 112244456799999999999862 2222211
Q ss_pred ------------hhc-CCCcEEEEecCCCCCCCccChHHHHHHHHHHH
Q 027174 144 ------------KID-RRYSALVEVQACGSMVTEEQPHAMLIPMEYFL 178 (227)
Q Consensus 144 ------------~~~-~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 178 (227)
.+. +.....+.+.+.||+.+-.+++-+++.+...+
T Consensus 249 ~~seee~~kI~~~f~~~~~~~sv~f~~dgHf~qK~~A~lIA~~i~~mf 296 (297)
T PF06342_consen 249 EISEEEKPKILKSFASGQKGASVFFAKDGHFQQKFRADLIAEAIKKMF 296 (297)
T ss_pred CCChhHHHHHHHHHhcCCceeEEEEecCChHHhHHHHHHHHHHHHHhh
Confidence 221 12233556777888888888888888877654
No 76
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=98.53 E-value=4.8e-06 Score=63.41 Aligned_cols=56 Identities=9% Similarity=0.033 Sum_probs=40.1
Q ss_pred cccEEEEecCCCcccchH-----HHHHhhhcCCCcEEEEecCCCCCCCcc-ChHHHHHHHHHHH
Q 027174 121 QCRSLIFVGESSPFHSEA-----VHMTSKIDRRYSALVEVQACGSMVTEE-QPHAMLIPMEYFL 178 (227)
Q Consensus 121 ~~Pvlii~G~~D~~~~~~-----~~~~~~~~~~~~~~~~i~~~gH~~~~e-~p~~~~~~i~~fl 178 (227)
.+|.++.....|+..... ..+.+... ...+++.++ ++|+-++. +..++++.|.++|
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~-~~~~~~~v~-G~H~~~l~~~~~~i~~~I~~~~ 229 (229)
T PF00975_consen 168 KVPITLFYALDDPLVSMDRLEEADRWWDYTS-GDVEVHDVP-GDHFSMLKPHVAEIAEKIAEWL 229 (229)
T ss_dssp SSEEEEEEECSSSSSSHHCGGHHCHHHGCBS-SSEEEEEES-SETTGHHSTTHHHHHHHHHHHH
T ss_pred CCcEEEEecCCCccccchhhhhHHHHHHhcC-CCcEEEEEc-CCCcEecchHHHHHHHHHhccC
Confidence 568899999898876322 22555553 345677776 79998887 7778888888775
No 77
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=98.49 E-value=1.6e-06 Score=68.15 Aligned_cols=34 Identities=18% Similarity=0.203 Sum_probs=31.0
Q ss_pred CceecchhHHHHHHHHHhcCCccceEEEecCCCC
Q 027174 1 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 34 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~ 34 (227)
+++||||||.+|+.++.++|+.+.+++++++...
T Consensus 141 ~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~ 174 (275)
T TIGR02821 141 GITGHSMGGHGALVIALKNPDRFKSVSAFAPIVA 174 (275)
T ss_pred EEEEEChhHHHHHHHHHhCcccceEEEEECCccC
Confidence 4789999999999999999999999999988754
No 78
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=98.45 E-value=2.2e-06 Score=63.04 Aligned_cols=54 Identities=15% Similarity=0.059 Sum_probs=38.7
Q ss_pred ccccEEEEecCCCcccchHHHHHhhhcCCCcEEEEecCCCCCCCccChHHHHHHHHHHH
Q 027174 120 LQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFL 178 (227)
Q Consensus 120 i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 178 (227)
-..+++++.+..|.+++... ..+.. .++...+.+|++|-+. +=++....|.+|+
T Consensus 133 ~~~~~lvll~~~DEvLd~~~-a~~~~--~~~~~~i~~ggdH~f~--~f~~~l~~i~~f~ 186 (187)
T PF05728_consen 133 NPERYLVLLQTGDEVLDYRE-AVAKY--RGCAQIIEEGGDHSFQ--DFEEYLPQIIAFL 186 (187)
T ss_pred CCccEEEEEecCCcccCHHH-HHHHh--cCceEEEEeCCCCCCc--cHHHHHHHHHHhh
Confidence 35699999999999886633 34445 4456667788999754 4556777788886
No 79
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.45 E-value=1.2e-06 Score=68.73 Aligned_cols=70 Identities=14% Similarity=0.116 Sum_probs=50.3
Q ss_pred CCccccCcccccEEEEecCCCcccch-HHHHHhhhcCCCcEEEEecCCCCCCCcc----ChH-HHHHHHHHHHhhC
Q 027174 112 DISEGLRKLQCRSLIFVGESSPFHSE-AVHMTSKIDRRYSALVEVQACGSMVTEE----QPH-AMLIPMEYFLMGY 181 (227)
Q Consensus 112 ~~~~~l~~i~~Pvlii~G~~D~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e----~p~-~~~~~i~~fl~~~ 181 (227)
.....+++|.+|+++|++.+|+++.. .........+|+..+...+.+||.-++. +|. ..-+.+.+|++..
T Consensus 265 Ss~~~L~~Ir~PtLii~A~DDP~~~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~ 340 (345)
T COG0429 265 SSLPLLPKIRKPTLIINAKDDPFMPPEVIPKLQEMLNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPF 340 (345)
T ss_pred cccccccccccceEEEecCCCCCCChhhCCcchhcCCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHH
Confidence 34456899999999999999999833 3222222133889999999999988876 443 5556777777653
No 80
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=98.44 E-value=1.4e-07 Score=69.38 Aligned_cols=132 Identities=14% Similarity=0.103 Sum_probs=85.8
Q ss_pred CceecchhHHHHHHHHHhcCCccceEEEecCCCCCCchhHHHHHHHhHHHHHhhccchhHHHHHHHHhhchhhcCCCCCC
Q 027174 1 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVP 80 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (227)
++.|-|+||++|..+|++..+++.++|+-++....+...-. .+ ..+... ....+.....
T Consensus 152 vlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i~--------~v-----~p~~~k-~i~~lc~kn~------- 210 (300)
T KOG4391|consen 152 VLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAIP--------LV-----FPFPMK-YIPLLCYKNK------- 210 (300)
T ss_pred EEEecccCCeeEEEeeccchhheeeeeeechhccchhhhhh--------ee-----ccchhh-HHHHHHHHhh-------
Confidence 57899999999999999999999999998876543211100 00 000000 0011100000
Q ss_pred ChHHHHHHHHHhcccCchhHHHHHHHhcCCCCCccccCcccccEEEEecCCCcccc--hHHHHHhhhcCCCcEEEEecCC
Q 027174 81 ESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS--EAVHMTSKIDRRYSALVEVQAC 158 (227)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~--~~~~~~~~~~~~~~~~~~i~~~ 158 (227)
| .+. ..+.+.++|.|++.|..|.+++ ..+.+.....+...++..+|++
T Consensus 211 --------------------~------~S~----~ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~g 260 (300)
T KOG4391|consen 211 --------------------W------LSY----RKIGQCRMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFPDG 260 (300)
T ss_pred --------------------h------cch----hhhccccCceEEeecCccccCCcHHHHHHHHhCchhhhhheeCCCC
Confidence 0 110 1134668899999999999994 4455777776566789999999
Q ss_pred CCCCCccChHHHHHHHHHHHhhCCcc
Q 027174 159 GSMVTEEQPHAMLIPMEYFLMGYGLY 184 (227)
Q Consensus 159 gH~~~~e~p~~~~~~i~~fl~~~~~~ 184 (227)
.|.=.+- -+..-++|.+||.+....
T Consensus 261 tHNDT~i-~dGYfq~i~dFlaE~~~~ 285 (300)
T KOG4391|consen 261 THNDTWI-CDGYFQAIEDFLAEVVKS 285 (300)
T ss_pred ccCceEE-eccHHHHHHHHHHHhccC
Confidence 9975543 346778999999987654
No 81
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=98.44 E-value=2.2e-07 Score=72.54 Aligned_cols=168 Identities=13% Similarity=0.086 Sum_probs=51.8
Q ss_pred CceecchhHHHHHHHHHhcC-----CccceEEEecCCCCCCchhHHHHH----HHhHHHHH---hhccchhHHHHHHHHh
Q 027174 1 MCMGVTAGAYILTLFAMKYR-----HRVLGLILVSPLCKAPSWTEWLYN----KVMSNLLY---YYGMCGVVKELLLKRY 68 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P-----~~V~~lili~~~~~~~~~~~~~~~----~~~~~~~~---~~~~~~~~~~~~~~~~ 68 (227)
||+|||-|..-+++|+.... ..|++.||-+|....+........ ........ ..+-.. .++..-
T Consensus 111 VLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~~~~~~~~~v~~A~~~i~~g~~~----~~lp~~ 186 (303)
T PF08538_consen 111 VLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFLGEREAYEELVALAKELIAEGKGD----EILPRE 186 (303)
T ss_dssp EEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSHHH---HHHHHHHHHHHHHCT-TT-----GG---
T ss_pred EEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhcccchHHHHHHHHHHHHHHHcCCCC----ceeecc
Confidence 58999999999999998763 579999999998765443222111 11111110 001000 000000
Q ss_pred hchhhcCCCCCCChHHHHHHHHHhcccCchhHHHHHHHhcCCCCCccccCcccccEEEEecCCCcccchH---HHHHhhh
Q 027174 69 FSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHSEA---VHMTSKI 145 (227)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~---~~~~~~~ 145 (227)
+....... .+-...++.......+.+.++. .-.....+...+..+.+|+|++.+++|.+++.. ..+.+++
T Consensus 187 ~~~~~~~~----~PiTA~Rf~SL~s~~gdDD~FS---SDL~de~l~~tfG~v~~plLvl~Sg~DEyvP~~vdk~~Ll~rw 259 (303)
T PF08538_consen 187 FTPLVFYD----TPITAYRFLSLASPGGDDDYFS---SDLSDERLKKTFGKVSKPLLVLYSGKDEYVPPWVDKEALLERW 259 (303)
T ss_dssp -GGTTT-S----S---HHHHHT-S-SSHHHHTHH---HHHTT-HHHHTGGG--S-EEEEEE--TT---------------
T ss_pred ccccccCC----CcccHHHHHhccCCCCcccccC---CCCCHHHHHHHhccCCCceEEEecCCCceeccccccccccccc
Confidence 01100000 1111122222122222233221 112233455667889999999999999988432 2233333
Q ss_pred cC--C----CcEEEEecCCCCCCCccChH----HHHHHHHHHHh
Q 027174 146 DR--R----YSALVEVQACGSMVTEEQPH----AMLIPMEYFLM 179 (227)
Q Consensus 146 ~~--~----~~~~~~i~~~gH~~~~e~p~----~~~~~i~~fl~ 179 (227)
.. + +..-.+|||++|.+-.+..+ .+.+.+..||+
T Consensus 260 ~~a~~~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 260 KAATNPKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp --------------------------------------------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccCC
Confidence 10 1 11245899999998755433 47777778774
No 82
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.43 E-value=4.9e-06 Score=70.36 Aligned_cols=48 Identities=15% Similarity=0.234 Sum_probs=35.6
Q ss_pred ccCcccccEEEEecCCCccc--chHHHHHhhhcCCCcEEEEecCCCCCCCcc
Q 027174 116 GLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEE 165 (227)
Q Consensus 116 ~l~~i~~Pvlii~G~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e 165 (227)
.|.+|+||++++.|..|.++ ..+....+.+.+ +.+++.. .+||.--.-
T Consensus 436 dL~~I~~Pvl~va~~~DHIvPw~s~~~~~~l~gs-~~~fvl~-~gGHIggiv 485 (560)
T TIGR01839 436 DLKKVKCDSFSVAGTNDHITPWDAVYRSALLLGG-KRRFVLS-NSGHIQSIL 485 (560)
T ss_pred chhcCCCCeEEEecCcCCcCCHHHHHHHHHHcCC-CeEEEec-CCCcccccc
Confidence 37899999999999999998 355557777754 4566665 488854433
No 83
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=98.42 E-value=1.7e-06 Score=65.54 Aligned_cols=103 Identities=19% Similarity=0.272 Sum_probs=65.5
Q ss_pred CceecchhHHHHHHHHHhcCCccceEEEecCCCCCCchhHHHHHHHhHHHHHhhccchhHHHHHHHHhhchhhcCCCCCC
Q 027174 1 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVP 80 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (227)
+++|.|.||++|+.++.++|+.+.++|.+++..... ....
T Consensus 108 ~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~----------------------------------~~~~------ 147 (216)
T PF02230_consen 108 FLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPE----------------------------------SELE------ 147 (216)
T ss_dssp EEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTG----------------------------------CCCH------
T ss_pred ehhhhhhHHHHHHHHHHHcCcCcCEEEEeecccccc----------------------------------cccc------
Confidence 478999999999999999999999999998754310 0000
Q ss_pred ChHHHHHHHHHhcccCchhHHHHHHHhcCCCCCccccCcccccEEEEecCCCcccc--hHHHHHhhhcC--CCcEEEEec
Q 027174 81 ESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS--EAVHMTSKIDR--RYSALVEVQ 156 (227)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~--~~~~~~~~~~~--~~~~~~~i~ 156 (227)
. ...... ++|+++++|+.|++++ .++...+.+.. .+.+++.++
T Consensus 148 ~-------------------------------~~~~~~--~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~ 194 (216)
T PF02230_consen 148 D-------------------------------RPEALA--KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYP 194 (216)
T ss_dssp C-------------------------------CHCCCC--TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEET
T ss_pred c-------------------------------cccccC--CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcC
Confidence 0 000011 6799999999999984 34443333321 467899999
Q ss_pred CCCCCCCccChHHHHHHHHHHHhh
Q 027174 157 ACGSMVTEEQPHAMLIPMEYFLMG 180 (227)
Q Consensus 157 ~~gH~~~~e~p~~~~~~i~~fl~~ 180 (227)
+.||.+. .+..+.+.+||++
T Consensus 195 g~gH~i~----~~~~~~~~~~l~~ 214 (216)
T PF02230_consen 195 GGGHEIS----PEELRDLREFLEK 214 (216)
T ss_dssp T-SSS------HHHHHHHHHHHHH
T ss_pred CCCCCCC----HHHHHHHHHHHhh
Confidence 9999875 3445668888875
No 84
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=98.39 E-value=1.1e-07 Score=71.75 Aligned_cols=32 Identities=22% Similarity=0.507 Sum_probs=28.0
Q ss_pred ceecchhHHHHHHHHHhcCCccceEEEecCCCC
Q 027174 2 CMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 34 (227)
Q Consensus 2 lvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~ 34 (227)
++|.|.||-+|+.+|..+| .|+++|.+++...
T Consensus 26 i~G~SkGaelALllAs~~~-~i~avVa~~ps~~ 57 (213)
T PF08840_consen 26 IIGISKGAELALLLASRFP-QISAVVAISPSSV 57 (213)
T ss_dssp EEEETHHHHHHHHHHHHSS-SEEEEEEES--SB
T ss_pred EEEECHHHHHHHHHHhcCC-CccEEEEeCCcee
Confidence 6899999999999999999 8999999998765
No 85
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=98.36 E-value=2.6e-06 Score=74.32 Aligned_cols=65 Identities=14% Similarity=0.142 Sum_probs=50.6
Q ss_pred cCcccccEEEEecCCCccc--chHHHHHhhhc--CCCcEEEEecCCCCCCCc-cChHHHHHHHHHHHhhC
Q 027174 117 LRKLQCRSLIFVGESSPFH--SEAVHMTSKID--RRYSALVEVQACGSMVTE-EQPHAMLIPMEYFLMGY 181 (227)
Q Consensus 117 l~~i~~Pvlii~G~~D~~~--~~~~~~~~~~~--~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~~ 181 (227)
..++++|+|+|||+.|..+ +++..+...+. +..++++++|+.||.+.- ++-..+...+.+|+++.
T Consensus 547 ~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~~~~~~~~~~ 616 (620)
T COG1506 547 ADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRPENRVKVLKEILDWFKRH 616 (620)
T ss_pred hcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHH
Confidence 4678999999999999988 46666665553 356789999999998876 45566778888888765
No 86
>PRK10162 acetyl esterase; Provisional
Probab=98.33 E-value=8.5e-06 Score=65.42 Aligned_cols=60 Identities=8% Similarity=0.021 Sum_probs=44.4
Q ss_pred ccEEEEecCCCcccchHHHHHhhhcC--CCcEEEEecCCCCCCCc-----cChHHHHHHHHHHHhhC
Q 027174 122 CRSLIFVGESSPFHSEAVHMTSKIDR--RYSALVEVQACGSMVTE-----EQPHAMLIPMEYFLMGY 181 (227)
Q Consensus 122 ~Pvlii~G~~D~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~-----e~p~~~~~~i~~fl~~~ 181 (227)
.|+++++|+.|++.++...+.+++.. -.+++++++|..|.+.. +..++..+.+.+|+++.
T Consensus 249 Pp~~i~~g~~D~L~de~~~~~~~L~~aGv~v~~~~~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~ 315 (318)
T PRK10162 249 PPCFIAGAEFDPLLDDSRLLYQTLAAHQQPCEFKLYPGTLHAFLHYSRMMDTADDALRDGAQFFTAQ 315 (318)
T ss_pred CCeEEEecCCCcCcChHHHHHHHHHHcCCCEEEEEECCCceehhhccCchHHHHHHHHHHHHHHHHH
Confidence 59999999999998777777766632 34789999999996542 23445667777888653
No 87
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=98.30 E-value=3.3e-06 Score=63.96 Aligned_cols=63 Identities=14% Similarity=0.178 Sum_probs=36.9
Q ss_pred CcccccEEEEecCCCcccch--HHHHHhhh--cCCCcEEEEecCCCCCCCccChH--------HHHHHHHHHHhh
Q 027174 118 RKLQCRSLIFVGESSPFHSE--AVHMTSKI--DRRYSALVEVQACGSMVTEEQPH--------AMLIPMEYFLMG 180 (227)
Q Consensus 118 ~~i~~Pvlii~G~~D~~~~~--~~~~~~~~--~~~~~~~~~i~~~gH~~~~e~p~--------~~~~~i~~fl~~ 180 (227)
.++++|+++++|++|+.++. ...+.+.+ .+...++++++|++|-+.....+ +-.+.+.+|+++
T Consensus 142 ~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~ 216 (218)
T PF01738_consen 142 PKIKAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKR 216 (218)
T ss_dssp GG--S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC
T ss_pred cccCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHh
Confidence 45688999999999998832 33444444 12678999999999977654332 233455666654
No 88
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=98.13 E-value=9.5e-05 Score=57.80 Aligned_cols=34 Identities=29% Similarity=0.428 Sum_probs=31.2
Q ss_pred CceecchhHHHHHHHHHhcC---CccceEEEecCCCC
Q 027174 1 MCMGVTAGAYILTLFAMKYR---HRVLGLILVSPLCK 34 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P---~~V~~lili~~~~~ 34 (227)
|++|||+|+.++++++.+++ .+|.+++++-|...
T Consensus 87 iLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~ 123 (266)
T PF10230_consen 87 ILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIE 123 (266)
T ss_pred EEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccc
Confidence 68999999999999999999 78999999988764
No 89
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.11 E-value=2.6e-05 Score=62.04 Aligned_cols=54 Identities=6% Similarity=0.004 Sum_probs=43.3
Q ss_pred cEEEEecCCCccc--chHHHHHhhhcCCCcEEEEecCCCCCC-CccChHHHHHHHHHHHh
Q 027174 123 RSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMV-TEEQPHAMLIPMEYFLM 179 (227)
Q Consensus 123 Pvlii~G~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~-~~e~p~~~~~~i~~fl~ 179 (227)
.+.++.+++|.++ .....+.+.+ |++++.++++ ||.- ++-+.+.|.++|.+-++
T Consensus 291 ~ii~V~A~~DaYVPr~~v~~Lq~~W--PGsEvR~l~g-GHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 291 AIIFVAAKNDAYVPRHGVLSLQEIW--PGSEVRYLPG-GHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred cEEEEEecCceEechhhcchHHHhC--CCCeEEEecC-CcEEEeeechHHHHHHHHHHhh
Confidence 5788899999998 3455699999 9999999975 9954 45677889988887664
No 90
>PLN00021 chlorophyllase
Probab=98.10 E-value=2.6e-05 Score=62.35 Aligned_cols=34 Identities=18% Similarity=0.171 Sum_probs=28.7
Q ss_pred CceecchhHHHHHHHHHhcCC-----ccceEEEecCCCC
Q 027174 1 MCMGVTAGAYILTLFAMKYRH-----RVLGLILVSPLCK 34 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~-----~V~~lili~~~~~ 34 (227)
+++||||||.+|+.+|..+++ ++.++|++++...
T Consensus 129 ~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g 167 (313)
T PLN00021 129 ALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDG 167 (313)
T ss_pred EEEEECcchHHHHHHHhhccccccccceeeEEeeccccc
Confidence 378999999999999999985 5788888887643
No 91
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=98.01 E-value=9.2e-06 Score=63.28 Aligned_cols=34 Identities=21% Similarity=0.217 Sum_probs=31.3
Q ss_pred CceecchhHHHHHHHHHhcCCccceEEEecCCCC
Q 027174 1 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 34 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~ 34 (227)
+++||||||.+++.+|.++|++++++|+++|...
T Consensus 102 ~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~ 135 (266)
T TIGR03101 102 TLWGLRLGALLALDAANPLAAKCNRLVLWQPVVS 135 (266)
T ss_pred EEEEECHHHHHHHHHHHhCccccceEEEeccccc
Confidence 4799999999999999999999999999998654
No 92
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=97.89 E-value=0.00025 Score=58.03 Aligned_cols=140 Identities=12% Similarity=0.074 Sum_probs=68.7
Q ss_pred ceecchhHHHHHHHHHhcCCccceEEEecCCCCCCchhHHHHHHHhHHHHHhhccchhHHHHHHHHhhchhhcCCCCCCC
Q 027174 2 CMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPE 81 (227)
Q Consensus 2 lvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (227)
++|.|+||.+|.++|..++++++++|..++....--...+. . ...+....+.+..++ +.... +
T Consensus 265 ~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft~~~~--~--------~~~P~my~d~LA~rl-G~~~~------~ 327 (411)
T PF06500_consen 265 AWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFTDPEW--Q--------QRVPDMYLDVLASRL-GMAAV------S 327 (411)
T ss_dssp EEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH-HHH--H--------TTS-HHHHHHHHHHC-T-SCE-------
T ss_pred EEEeccchHHHHHHHHhcccceeeEeeeCchHhhhhccHHH--H--------hcCCHHHHHHHHHHh-CCccC------C
Confidence 68999999999999999999999999999875421111110 0 112222222221111 21110 1
Q ss_pred hHHHHHHHHHhcccCchhHHHHHHHhcCCCCCcccc--CcccccEEEEecCCCcccchH--HHHHhhhcCCCcEEEEecC
Q 027174 82 SDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGL--RKLQCRSLIFVGESSPFHSEA--VHMTSKIDRRYSALVEVQA 157 (227)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~Pvlii~G~~D~~~~~~--~~~~~~~~~~~~~~~~i~~ 157 (227)
.+.+ ...+..+.-.. ...+ ++..+|+|.+.|++|++.+.. +-++..- .+.+...++.
T Consensus 328 ---~~~l------------~~el~~~SLk~--qGlL~~rr~~~plL~i~~~~D~v~P~eD~~lia~~s--~~gk~~~~~~ 388 (411)
T PF06500_consen 328 ---DESL------------RGELNKFSLKT--QGLLSGRRCPTPLLAINGEDDPVSPIEDSRLIAESS--TDGKALRIPS 388 (411)
T ss_dssp ---HHHH------------HHHGGGGSTTT--TTTTTSS-BSS-EEEEEETT-SSS-HHHHHHHHHTB--TT-EEEEE-S
T ss_pred ---HHHH------------HHHHHhcCcch--hccccCCCCCcceEEeecCCCCCCCHHHHHHHHhcC--CCCceeecCC
Confidence 1111 11111111000 0123 678899999999999998543 3344444 5678888875
Q ss_pred CCCCCCccChHHHHHHHHHHHhh
Q 027174 158 CGSMVTEEQPHAMLIPMEYFLMG 180 (227)
Q Consensus 158 ~gH~~~~e~p~~~~~~i~~fl~~ 180 (227)
.. ++.-.+ .-...+.+||++
T Consensus 389 ~~--~~~gy~-~al~~~~~Wl~~ 408 (411)
T PF06500_consen 389 KP--LHMGYP-QALDEIYKWLED 408 (411)
T ss_dssp SS--HHHHHH-HHHHHHHHHHHH
T ss_pred Cc--cccchH-HHHHHHHHHHHH
Confidence 44 122223 455667788865
No 93
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=97.88 E-value=0.00033 Score=56.15 Aligned_cols=65 Identities=22% Similarity=0.215 Sum_probs=39.7
Q ss_pred CCccccCcccccEEEEecCCCcccchHHH--HHhhhcCCCcEEEEecCCCCCCCccChHHHHHHHHHHHhh
Q 027174 112 DISEGLRKLQCRSLIFVGESSPFHSEAVH--MTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 180 (227)
Q Consensus 112 ~~~~~l~~i~~Pvlii~G~~D~~~~~~~~--~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 180 (227)
|.....+.|+||+++-.|-.|..+++... ....+. ...++.+++..||... ++.-.+...+||.+
T Consensus 253 D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~-~~K~l~vyp~~~He~~---~~~~~~~~~~~l~~ 319 (320)
T PF05448_consen 253 DAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIP-GPKELVVYPEYGHEYG---PEFQEDKQLNFLKE 319 (320)
T ss_dssp -HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC---SSEEEEEETT--SSTT---HHHHHHHHHHHHHH
T ss_pred hHHHHHHHcCCCEEEEEecCCCCCCchhHHHHHhccC-CCeeEEeccCcCCCch---hhHHHHHHHHHHhc
Confidence 44444578899999999999999955444 555664 3468999999998654 22226677777765
No 94
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=97.88 E-value=0.0001 Score=59.78 Aligned_cols=33 Identities=15% Similarity=0.234 Sum_probs=29.3
Q ss_pred ceecchhHHHHHHHHHhcCCc-cceEEEecCCCC
Q 027174 2 CMGVTAGAYILTLFAMKYRHR-VLGLILVSPLCK 34 (227)
Q Consensus 2 lvGhS~Gg~ia~~~A~~~P~~-V~~lili~~~~~ 34 (227)
++||+.||.++..+++.++.+ |++++++.+...
T Consensus 185 liGyCvGGtl~~~ala~~~~k~I~S~T~lts~~D 218 (445)
T COG3243 185 LIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVD 218 (445)
T ss_pred eeeEecchHHHHHHHHhhhhcccccceeeecchh
Confidence 689999999999999999988 999998876554
No 95
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=97.86 E-value=6.8e-05 Score=56.32 Aligned_cols=42 Identities=14% Similarity=0.140 Sum_probs=32.1
Q ss_pred ccEEEEecCCCcccchHHHHHhhhcC--CCcEEEEecCCCCCCC
Q 027174 122 CRSLIFVGESSPFHSEAVHMTSKIDR--RYSALVEVQACGSMVT 163 (227)
Q Consensus 122 ~Pvlii~G~~D~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~ 163 (227)
.|+++++|+.|.+.+....+.+++.. -+++++++++.+|.+.
T Consensus 167 Pp~~i~~g~~D~l~~~~~~~~~~L~~~gv~v~~~~~~g~~H~f~ 210 (211)
T PF07859_consen 167 PPTLIIHGEDDVLVDDSLRFAEKLKKAGVDVELHVYPGMPHGFF 210 (211)
T ss_dssp HEEEEEEETTSTTHHHHHHHHHHHHHTT-EEEEEEETTEETTGG
T ss_pred CCeeeeccccccchHHHHHHHHHHHHCCCCEEEEEECCCeEEee
Confidence 48999999999988766666665532 4568899999999754
No 96
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=97.83 E-value=0.00015 Score=51.06 Aligned_cols=109 Identities=15% Similarity=0.144 Sum_probs=70.8
Q ss_pred CceecchhHHHHHHHHHhcCCccceEEEecCCCCCCchhHHHHHHHhHHHHHhhccchhHHHHHHHHhhchhhcCCCCCC
Q 027174 1 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVP 80 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (227)
|+-||||||.++..+|..--..|++|++++=+..+++..+. .
T Consensus 92 i~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhppGKPe~--------------------------------~------ 133 (213)
T COG3571 92 IIGGKSMGGRVASMVADELQAPIDGLVCLGYPFHPPGKPEQ--------------------------------L------ 133 (213)
T ss_pred eeccccccchHHHHHHHhhcCCcceEEEecCccCCCCCccc--------------------------------c------
Confidence 56699999999999998876679999887643322111000 0
Q ss_pred ChHHHHHHHHHhcccCchhHHHHHHHhcCCCCCccccCcccccEEEEecCCCccc-chHHHHHhhhcCCCcEEEEecCCC
Q 027174 81 ESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH-SEAVHMTSKIDRRYSALVEVQACG 159 (227)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~-~~~~~~~~~~~~~~~~~~~i~~~g 159 (227)
-.+.|..+++|++|.+|+.|.+- .+...-.... +..++++++++.
T Consensus 134 --------------------------------Rt~HL~gl~tPtli~qGtrD~fGtr~~Va~y~ls--~~iev~wl~~ad 179 (213)
T COG3571 134 --------------------------------RTEHLTGLKTPTLITQGTRDEFGTRDEVAGYALS--DPIEVVWLEDAD 179 (213)
T ss_pred --------------------------------hhhhccCCCCCeEEeecccccccCHHHHHhhhcC--CceEEEEeccCc
Confidence 01225678999999999999985 2222222222 668999999999
Q ss_pred CCCCc----------cChHHHHHHHHHHHhhC
Q 027174 160 SMVTE----------EQPHAMLIPMEYFLMGY 181 (227)
Q Consensus 160 H~~~~----------e~p~~~~~~i~~fl~~~ 181 (227)
|.+-- ++-...++.+..|..+.
T Consensus 180 HDLkp~k~vsgls~~~hL~~~A~~va~~~~~l 211 (213)
T COG3571 180 HDLKPRKLVSGLSTADHLKTLAEQVAGWARRL 211 (213)
T ss_pred cccccccccccccHHHHHHHHHHHHHHHHhhc
Confidence 97532 22234566667776654
No 97
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=97.83 E-value=7.9e-05 Score=49.42 Aligned_cols=59 Identities=20% Similarity=0.236 Sum_probs=50.9
Q ss_pred cccEEEEecCCCccc--chHHHHHhhhcCCCcEEEEecCCCCCCCccChHHHHHHHHHHHhhC
Q 027174 121 QCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 181 (227)
Q Consensus 121 ~~Pvlii~G~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 181 (227)
..|+|++.++.|+.+ ..+..+++.+ ++++++.+++.||-.....-.-+.+.+.+||..-
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l--~~s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~G 94 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARL--PGSRLVTVDGAGHGVYAGGSPCVDKAVDDYLLDG 94 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHC--CCceEEEEeccCcceecCCChHHHHHHHHHHHcC
Confidence 589999999999998 5777799999 7899999999999988655567888899999753
No 98
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.82 E-value=1.6e-05 Score=62.38 Aligned_cols=34 Identities=12% Similarity=0.155 Sum_probs=31.6
Q ss_pred CceecchhHHHHHHHHHhcCCccceEEEecCCCC
Q 027174 1 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 34 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~ 34 (227)
++|||||||.+|..++.++|++|.+++++||...
T Consensus 115 ~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p 148 (275)
T cd00707 115 HLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGP 148 (275)
T ss_pred EEEEecHHHHHHHHHHHHhcCccceeEEecCCcc
Confidence 4799999999999999999999999999998754
No 99
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=97.81 E-value=0.00021 Score=63.87 Aligned_cols=67 Identities=10% Similarity=0.008 Sum_probs=44.3
Q ss_pred ccccCcccccEEEEecCCCcccc--hHHHHHhhhcC--CCcEEEEecCCCCCCC-ccChHHHHHHHHHHHhhC
Q 027174 114 SEGLRKLQCRSLIFVGESSPFHS--EAVHMTSKIDR--RYSALVEVQACGSMVT-EEQPHAMLIPMEYFLMGY 181 (227)
Q Consensus 114 ~~~l~~i~~Pvlii~G~~D~~~~--~~~~~~~~~~~--~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~ 181 (227)
...+.++++|+++++|..|..+. ....+.+.+.. ...++.+. ..+|... ...+.++.+.+.+|+...
T Consensus 448 ~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~-~g~H~~~~~~~~~d~~e~~~~Wfd~~ 519 (767)
T PRK05371 448 LKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLH-QGGHVYPNNWQSIDFRDTMNAWFTHK 519 (767)
T ss_pred hhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEe-CCCccCCCchhHHHHHHHHHHHHHhc
Confidence 34467899999999999999884 44455555521 23455444 5788543 345567777788887653
No 100
>COG0400 Predicted esterase [General function prediction only]
Probab=97.77 E-value=0.00012 Score=54.67 Aligned_cols=100 Identities=17% Similarity=0.149 Sum_probs=69.2
Q ss_pred CceecchhHHHHHHHHHhcCCccceEEEecCCCCCCchhHHHHHHHhHHHHHhhccchhHHHHHHHHhhchhhcCCCCCC
Q 027174 1 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVP 80 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (227)
|++|+|=||++++.+..++|+.++++|+..+....+.. .
T Consensus 102 i~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~----------------------------------~------- 140 (207)
T COG0400 102 ILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPE----------------------------------L------- 140 (207)
T ss_pred EEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCc----------------------------------c-------
Confidence 68999999999999999999999999998876542100 0
Q ss_pred ChHHHHHHHHHhcccCchhHHHHHHHhcCCCCCccccCcccccEEEEecCCCcccc--hHHHHHhhhc--CCCcEEEEec
Q 027174 81 ESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS--EAVHMTSKID--RRYSALVEVQ 156 (227)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~--~~~~~~~~~~--~~~~~~~~i~ 156 (227)
. . ..-..|+++++|..|++++ .+.++.+.+. +.++..+.++
T Consensus 141 ~-----------------------------~------~~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~ 185 (207)
T COG0400 141 L-----------------------------P------DLAGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHE 185 (207)
T ss_pred c-----------------------------c------ccCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEec
Confidence 0 0 0114599999999999972 3333333332 2567788888
Q ss_pred CCCCCCCccChHHHHHHHHHHHhhC
Q 027174 157 ACGSMVTEEQPHAMLIPMEYFLMGY 181 (227)
Q Consensus 157 ~~gH~~~~e~p~~~~~~i~~fl~~~ 181 (227)
.||.+..| ..+.+.+|+.+.
T Consensus 186 -~GH~i~~e----~~~~~~~wl~~~ 205 (207)
T COG0400 186 -GGHEIPPE----ELEAARSWLANT 205 (207)
T ss_pred -CCCcCCHH----HHHHHHHHHHhc
Confidence 99987644 345566677653
No 101
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=97.75 E-value=8.9e-05 Score=55.97 Aligned_cols=48 Identities=19% Similarity=0.324 Sum_probs=29.0
Q ss_pred CcccccEEEEecCCCcccc--hHHHHHhhhcCCCcEEEEecCCCCCCCccCh
Q 027174 118 RKLQCRSLIFVGESSPFHS--EAVHMTSKIDRRYSALVEVQACGSMVTEEQP 167 (227)
Q Consensus 118 ~~i~~Pvlii~G~~D~~~~--~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p 167 (227)
..|++|++-|+|.+|.+++ .+..+.+.+.+ +.+++.. ++||.++....
T Consensus 158 ~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~-~~~v~~h-~gGH~vP~~~~ 207 (212)
T PF03959_consen 158 PKISIPTLHVIGENDPVVPPERSEALAEMFDP-DARVIEH-DGGHHVPRKKE 207 (212)
T ss_dssp TT---EEEEEEETT-SSS-HHHHHHHHHHHHH-HEEEEEE-SSSSS----HH
T ss_pred ccCCCCeEEEEeCCCCCcchHHHHHHHHhccC-CcEEEEE-CCCCcCcCChh
Confidence 4678999999999999996 66668888842 2555555 58999886543
No 102
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=97.71 E-value=3.8e-05 Score=63.75 Aligned_cols=34 Identities=18% Similarity=0.234 Sum_probs=31.4
Q ss_pred CceecchhHHHHHHHHHhcCCccceEEEecCCCC
Q 027174 1 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 34 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~ 34 (227)
.+|||||||.||..++.++|++|.+++++||...
T Consensus 122 hLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP 155 (442)
T TIGR03230 122 HLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGP 155 (442)
T ss_pred EEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCC
Confidence 3799999999999999999999999999998754
No 103
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=97.68 E-value=0.00016 Score=51.74 Aligned_cols=112 Identities=18% Similarity=0.187 Sum_probs=74.9
Q ss_pred CceecchhHHHHHHHHHhcCCccceEEEecCCCCCCchhHHHHHHHhHHHHHhhccchhHHHHHHHHhhchhhcCCCCCC
Q 027174 1 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVP 80 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (227)
|+|+||+|+..+.+|+.+....|+|++|++++-.... ..+ .. . ..-|.+.
T Consensus 62 vlVAHSLGc~~v~h~~~~~~~~V~GalLVAppd~~~~-~~~-------------------~~-~-~~tf~~~-------- 111 (181)
T COG3545 62 VLVAHSLGCATVAHWAEHIQRQVAGALLVAPPDVSRP-EIR-------------------PK-H-LMTFDPI-------- 111 (181)
T ss_pred EEEEecccHHHHHHHHHhhhhccceEEEecCCCcccc-ccc-------------------hh-h-ccccCCC--------
Confidence 6899999999999999998889999999998643211 000 00 0 0000000
Q ss_pred ChHHHHHHHHHhcccCchhHHHHHHHhcCCCCCccccCcccccEEEEecCCCccc--chHHHHHhhhcCCCcEEEEecCC
Q 027174 81 ESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQAC 158 (227)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~ 158 (227)
. ...+..|.+++...+|+++ +.+..+++.+ .+.++.+.++
T Consensus 112 -------------------------------p----~~~lpfps~vvaSrnDp~~~~~~a~~~a~~w---gs~lv~~g~~ 153 (181)
T COG3545 112 -------------------------------P----REPLPFPSVVVASRNDPYVSYEHAEDLANAW---GSALVDVGEG 153 (181)
T ss_pred -------------------------------c----cccCCCceeEEEecCCCCCCHHHHHHHHHhc---cHhheecccc
Confidence 0 1234559999999999998 5666688888 3678899999
Q ss_pred CCCCCcc---ChHHHHHHHHHHHhh
Q 027174 159 GSMVTEE---QPHAMLIPMEYFLMG 180 (227)
Q Consensus 159 gH~~~~e---~p~~~~~~i~~fl~~ 180 (227)
||+.-.+ .=.+....+.+|+.+
T Consensus 154 GHiN~~sG~g~wpeg~~~l~~~~s~ 178 (181)
T COG3545 154 GHINAESGFGPWPEGYALLAQLLSR 178 (181)
T ss_pred cccchhhcCCCcHHHHHHHHHHhhh
Confidence 9975432 233455566666644
No 104
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.54 E-value=0.0011 Score=50.87 Aligned_cols=64 Identities=9% Similarity=0.190 Sum_probs=42.5
Q ss_pred CcccccEEEEecCCCcccc--hHHHHHhhhcCC--CcEEEEecCCCCCCCccC--------h---HHHHHHHHHHHhhC
Q 027174 118 RKLQCRSLIFVGESSPFHS--EAVHMTSKIDRR--YSALVEVQACGSMVTEEQ--------P---HAMLIPMEYFLMGY 181 (227)
Q Consensus 118 ~~i~~Pvlii~G~~D~~~~--~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~--------p---~~~~~~i~~fl~~~ 181 (227)
.++++|++++.|+.|..++ ....+.+.+... +.++.+++++.|-++-+. + +.-.+.+.+|+++.
T Consensus 155 ~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~ 233 (236)
T COG0412 155 PKIKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRL 233 (236)
T ss_pred ccccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHh
Confidence 4679999999999999883 233344444322 578999999999777442 1 23344566676653
No 105
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=97.54 E-value=0.00018 Score=54.80 Aligned_cols=36 Identities=11% Similarity=0.123 Sum_probs=29.4
Q ss_pred CceecchhHHHHHHHHHhcC---CccceEEEecCCCCCC
Q 027174 1 MCMGVTAGAYILTLFAMKYR---HRVLGLILVSPLCKAP 36 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P---~~V~~lili~~~~~~~ 36 (227)
|+|||||||.+|..++...+ +.|+++|.++++....
T Consensus 88 ilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g~ 126 (225)
T PF07819_consen 88 ILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRGS 126 (225)
T ss_pred EEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCCc
Confidence 68999999999998887654 5799999999776533
No 106
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=97.52 E-value=0.00081 Score=54.07 Aligned_cols=62 Identities=16% Similarity=0.204 Sum_probs=44.0
Q ss_pred ccc-cEEEEecCCCcccchHHHHHhhhcCCC--cEEEEecCCCCCCCccCh-----HHHHHHHHHHHhhC
Q 027174 120 LQC-RSLIFVGESSPFHSEAVHMTSKIDRRY--SALVEVQACGSMVTEEQP-----HAMLIPMEYFLMGY 181 (227)
Q Consensus 120 i~~-Pvlii~G~~D~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p-----~~~~~~i~~fl~~~ 181 (227)
..+ |++++.++.|.+.+....+++++...+ .++..++++.|-++.-.| .++.+.+.+|+++.
T Consensus 266 ~~lp~tlv~~ag~D~L~D~~~~Y~~~Lkk~Gv~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 266 LGLPPTLVVVAGYDVLRDEGLAYAEKLKKAGVEVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred cCCCceEEEEeCchhhhhhhHHHHHHHHHcCCeEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 344 599999999998877777777664333 345578999997665444 46777888888753
No 107
>PRK04940 hypothetical protein; Provisional
Probab=97.47 E-value=0.0078 Score=43.85 Aligned_cols=32 Identities=16% Similarity=0.260 Sum_probs=27.5
Q ss_pred CceecchhHHHHHHHHHhcCCccceEEEecCCCCC
Q 027174 1 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 35 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~~ 35 (227)
.+||.||||..|..+|.+|. ...||+||...+
T Consensus 63 ~liGSSLGGyyA~~La~~~g---~~aVLiNPAv~P 94 (180)
T PRK04940 63 LICGVGLGGYWAERIGFLCG---IRQVIFNPNLFP 94 (180)
T ss_pred EEEEeChHHHHHHHHHHHHC---CCEEEECCCCCh
Confidence 47999999999999999985 367899998764
No 108
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=97.44 E-value=0.0017 Score=56.23 Aligned_cols=33 Identities=15% Similarity=0.024 Sum_probs=30.0
Q ss_pred ceecchhHHHHHHHHHhcCCccceEEEecCCCC
Q 027174 2 CMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 34 (227)
Q Consensus 2 lvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~ 34 (227)
++||||||.+++.+|..+|+.++++|..++...
T Consensus 101 ~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d 133 (550)
T TIGR00976 101 MLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWD 133 (550)
T ss_pred EEEeChHHHHHHHHhccCCCceeEEeecCcccc
Confidence 689999999999999999999999999887653
No 109
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.41 E-value=0.001 Score=51.38 Aligned_cols=34 Identities=18% Similarity=0.116 Sum_probs=29.8
Q ss_pred CceecchhHHHHHHHHHh---cCCccceEEEecCCCC
Q 027174 1 MCMGVTAGAYILTLFAMK---YRHRVLGLILVSPLCK 34 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~---~P~~V~~lili~~~~~ 34 (227)
.|+|||+||.+|...|.+ ..+.|..|+++|+.+.
T Consensus 68 ~L~G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 68 VLLGWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred EEEeeccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 378999999999999985 3457999999999887
No 110
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=97.38 E-value=0.00015 Score=54.63 Aligned_cols=34 Identities=18% Similarity=0.193 Sum_probs=30.4
Q ss_pred CceecchhHHHHHHHHHhcCCccceEEEecCCCC
Q 027174 1 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 34 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~ 34 (227)
+++||||||.+++.++.++|+.+.+++.+++...
T Consensus 98 ~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~ 131 (212)
T TIGR01840 98 YVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPY 131 (212)
T ss_pred EEEEECHHHHHHHHHHHhCchhheEEEeecCCcc
Confidence 3789999999999999999999999988887654
No 111
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=97.30 E-value=0.00018 Score=59.96 Aligned_cols=34 Identities=12% Similarity=0.132 Sum_probs=29.4
Q ss_pred CceecchhHHHHHHHHHhcCCc----cceEEEecCCCC
Q 027174 1 MCMGVTAGAYILTLFAMKYRHR----VLGLILVSPLCK 34 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~~----V~~lili~~~~~ 34 (227)
++|||||||.+++.++..+|+. |+++|.++++..
T Consensus 165 ~LVGHSMGGlva~~fl~~~p~~~~k~I~~~I~la~P~~ 202 (440)
T PLN02733 165 NIISHSMGGLLVKCFMSLHSDVFEKYVNSWIAIAAPFQ 202 (440)
T ss_pred EEEEECHhHHHHHHHHHHCCHhHHhHhccEEEECCCCC
Confidence 4899999999999999999874 788899987654
No 112
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=97.29 E-value=0.00021 Score=55.17 Aligned_cols=35 Identities=17% Similarity=0.149 Sum_probs=31.6
Q ss_pred CceecchhHHHHHHHHHhcCCccceEEEecCCCCC
Q 027174 1 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 35 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~~ 35 (227)
.++|+||||..|+.++.+||+.+.+++.+++....
T Consensus 118 ~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~ 152 (251)
T PF00756_consen 118 AIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDP 152 (251)
T ss_dssp EEEEETHHHHHHHHHHHHSTTTESEEEEESEESET
T ss_pred EEeccCCCcHHHHHHHHhCccccccccccCccccc
Confidence 37899999999999999999999999999976553
No 113
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=97.29 E-value=0.0012 Score=62.70 Aligned_cols=34 Identities=18% Similarity=0.101 Sum_probs=29.5
Q ss_pred CceecchhHHHHHHHHHh---cCCccceEEEecCCCC
Q 027174 1 MCMGVTAGAYILTLFAMK---YRHRVLGLILVSPLCK 34 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~---~P~~V~~lili~~~~~ 34 (227)
+++||||||.+|.++|.+ ++++|..++++++.+.
T Consensus 1136 ~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~~~ 1172 (1296)
T PRK10252 1136 HLLGYSLGGTLAQGIAARLRARGEEVAFLGLLDTWPP 1172 (1296)
T ss_pred EEEEechhhHHHHHHHHHHHHcCCceeEEEEecCCCc
Confidence 479999999999999996 5889999999997543
No 114
>PRK10115 protease 2; Provisional
Probab=97.21 E-value=0.0057 Score=54.35 Aligned_cols=33 Identities=21% Similarity=0.319 Sum_probs=29.4
Q ss_pred ceecchhHHHHHHHHHhcCCccceEEEecCCCC
Q 027174 2 CMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 34 (227)
Q Consensus 2 lvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~ 34 (227)
+.|.|.||.++...+.++|++++++|...+...
T Consensus 528 i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D 560 (686)
T PRK10115 528 GMGGSAGGMLMGVAINQRPELFHGVIAQVPFVD 560 (686)
T ss_pred EEEECHHHHHHHHHHhcChhheeEEEecCCchh
Confidence 679999999999999999999999998877654
No 115
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=97.21 E-value=0.0061 Score=51.14 Aligned_cols=33 Identities=18% Similarity=0.169 Sum_probs=29.4
Q ss_pred CceecchhHHHHHHHHHhcCCccceEEEecCCC
Q 027174 1 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLC 33 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~ 33 (227)
++||.+-||+.++.+|+.+|+.+..+|+-+++.
T Consensus 143 ~liGnCQgGWa~~mlAA~~Pd~~gplvlaGaPl 175 (581)
T PF11339_consen 143 NLIGNCQGGWAAMMLAALRPDLVGPLVLAGAPL 175 (581)
T ss_pred eEEeccHHHHHHHHHHhcCcCccCceeecCCCc
Confidence 589999999999999999999998888877554
No 116
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=97.17 E-value=0.0051 Score=45.62 Aligned_cols=34 Identities=12% Similarity=0.196 Sum_probs=28.5
Q ss_pred CceecchhHHHHHHHHHh---cCCccceEEEecCCCC
Q 027174 1 MCMGVTAGAYILTLFAMK---YRHRVLGLILVSPLCK 34 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~---~P~~V~~lili~~~~~ 34 (227)
+++||||||.++..+|.+ .++.+.+++++++...
T Consensus 67 ~l~g~s~Gg~~a~~~a~~l~~~~~~~~~l~~~~~~~~ 103 (212)
T smart00824 67 VLVGHSSGGLLAHAVAARLEARGIPPAAVVLLDTYPP 103 (212)
T ss_pred EEEEECHHHHHHHHHHHHHHhCCCCCcEEEEEccCCC
Confidence 478999999999999986 4567999999987654
No 117
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.11 E-value=0.014 Score=44.82 Aligned_cols=56 Identities=4% Similarity=-0.064 Sum_probs=44.5
Q ss_pred EEEEecCCCccc--chHHHHHhhhcCCCcEEEEecCCCCCC-CccChHHHHHHHHHHHhhCC
Q 027174 124 SLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMV-TEEQPHAMLIPMEYFLMGYG 182 (227)
Q Consensus 124 vlii~G~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~-~~e~p~~~~~~i~~fl~~~~ 182 (227)
+.++.+++|.++ .....+.+.+ |++++..++ +||.. ++-+-+.|-++|.+-|++..
T Consensus 309 ~ivv~A~~D~Yipr~gv~~lQ~~W--Pg~eVr~~e-gGHVsayl~k~dlfRR~I~d~L~R~~ 367 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRSLQEIW--PGCEVRYLE-GGHVSAYLFKQDLFRRAIVDGLDRLD 367 (371)
T ss_pred EEEEEecCCccccccCcHHHHHhC--CCCEEEEee-cCceeeeehhchHHHHHHHHHHHhhh
Confidence 566778888887 3445588999 999999998 88954 56678899999999887754
No 118
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=97.01 E-value=0.012 Score=47.99 Aligned_cols=60 Identities=13% Similarity=0.148 Sum_probs=48.0
Q ss_pred CcccccEEEEecCCCccc--chHHHHHhhhcCCCcEEEEecCCCCCCCccChHHHHHHHHHHHhhC
Q 027174 118 RKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 181 (227)
Q Consensus 118 ~~i~~Pvlii~G~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 181 (227)
.++.+|.++|.|..|.+. +....+...+.+ ...+..+||++|..-. ..+.+.+..|+...
T Consensus 259 ~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G-~K~lr~vPN~~H~~~~---~~~~~~l~~f~~~~ 320 (367)
T PF10142_consen 259 DRLTMPKYIINATGDEFFVPDSSNFYYDKLPG-EKYLRYVPNAGHSLIG---SDVVQSLRAFYNRI 320 (367)
T ss_pred HhcCccEEEEecCCCceeccCchHHHHhhCCC-CeeEEeCCCCCcccch---HHHHHHHHHHHHHH
Confidence 456889999999999987 455667788843 3468899999998776 67778899998875
No 119
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=96.94 E-value=0.0011 Score=51.39 Aligned_cols=33 Identities=15% Similarity=0.302 Sum_probs=27.1
Q ss_pred ceecchhHHHHHHHHHhcCC-----ccceEEEecCCCC
Q 027174 2 CMGVTAGAYILTLFAMKYRH-----RVLGLILVSPLCK 34 (227)
Q Consensus 2 lvGhS~Gg~ia~~~A~~~P~-----~V~~lili~~~~~ 34 (227)
+|||||||.+++.|+..+.. .|.++|.++++..
T Consensus 107 ~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfn 144 (255)
T PF06028_consen 107 LVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFN 144 (255)
T ss_dssp EEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TT
T ss_pred EEEECccHHHHHHHHHHhccCCCCcccceEEEeccccC
Confidence 69999999999999998753 5899999998654
No 120
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=96.93 E-value=0.017 Score=43.40 Aligned_cols=32 Identities=6% Similarity=-0.045 Sum_probs=22.8
Q ss_pred CceecchhHHHHHHHHHhcCCccceEEEecCCCC
Q 027174 1 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 34 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~ 34 (227)
.|||+|||=.+|..+....| +...|.+++.+.
T Consensus 60 ~lvAWSmGVw~A~~~l~~~~--~~~aiAINGT~~ 91 (213)
T PF04301_consen 60 YLVAWSMGVWAANRVLQGIP--FKRAIAINGTPY 91 (213)
T ss_pred EEEEEeHHHHHHHHHhccCC--cceeEEEECCCC
Confidence 37999999999988866553 555566665543
No 121
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=96.91 E-value=0.0035 Score=46.77 Aligned_cols=59 Identities=17% Similarity=0.251 Sum_probs=44.8
Q ss_pred cCcccccEEEEecCCCcccc--hHHHHHhhhcCCCcEEEEecCCCCCCCccChHHHHHHHHHHHhh
Q 027174 117 LRKLQCRSLIFVGESSPFHS--EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 180 (227)
Q Consensus 117 l~~i~~Pvlii~G~~D~~~~--~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 180 (227)
.+.+++|.|-|.|+.|.+++ .+..+++.+ ++.. ++...+||+++-.+ ...+.+.+|++.
T Consensus 159 ~~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~--~~a~-vl~HpggH~VP~~~--~~~~~i~~fi~~ 219 (230)
T KOG2551|consen 159 KRPLSTPSLHIFGETDTIVPSERSEQLAESF--KDAT-VLEHPGGHIVPNKA--KYKEKIADFIQS 219 (230)
T ss_pred ccCCCCCeeEEecccceeecchHHHHHHHhc--CCCe-EEecCCCccCCCch--HHHHHHHHHHHH
Confidence 35789999999999999984 456799999 7774 44445899999665 466666666655
No 122
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=96.90 E-value=0.0012 Score=49.55 Aligned_cols=62 Identities=15% Similarity=0.134 Sum_probs=42.3
Q ss_pred cccCcccccEEEEecCCCcccchH--HHHHhhhcCCCc--EEEEecC----CCCCCCccCh-HHHHHHHHHHH
Q 027174 115 EGLRKLQCRSLIFVGESSPFHSEA--VHMTSKIDRRYS--ALVEVQA----CGSMVTEEQP-HAMLIPMEYFL 178 (227)
Q Consensus 115 ~~l~~i~~Pvlii~G~~D~~~~~~--~~~~~~~~~~~~--~~~~i~~----~gH~~~~e~p-~~~~~~i~~fl 178 (227)
+....+++|++++...+|+..+.+ ..+.+.. +++ +...++. .||+-..-+| |..-+.+.+|+
T Consensus 210 q~yaaVrtPi~~~~~~DD~w~P~As~d~f~~~y--~nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 210 QVYAAVRTPITFSRALDDPWAPPASRDAFASFY--RNAPLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred HHHHHhcCceeeeccCCCCcCCHHHHHHHHHhh--hcCcccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 345678999999999999998433 2355555 444 3444443 4999888887 66666666654
No 123
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.86 E-value=0.00097 Score=47.52 Aligned_cols=34 Identities=18% Similarity=0.258 Sum_probs=26.8
Q ss_pred CceecchhHHHHHHHHHhcCC----ccceEEEecCCCC
Q 027174 1 MCMGVTAGAYILTLFAMKYRH----RVLGLILVSPLCK 34 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~----~V~~lili~~~~~ 34 (227)
+++|||+||.+|..++..... .+..++..+++..
T Consensus 31 ~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~ 68 (153)
T cd00741 31 HVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRV 68 (153)
T ss_pred EEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCcc
Confidence 478999999999999998765 5666777776544
No 124
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=96.80 E-value=0.0074 Score=44.24 Aligned_cols=52 Identities=10% Similarity=0.054 Sum_probs=35.2
Q ss_pred ccEEEEecCCCcccchHHHHHhhhcCCCcEEEEecCCCCCCCccChHHHHHHHHHHHhh
Q 027174 122 CRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 180 (227)
Q Consensus 122 ~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 180 (227)
.|++.|+|+++.-. ....+..++.+.+.+| +||++- ++.+.++..|.+-|++
T Consensus 140 ~~v~CiyG~~E~d~-----~cp~l~~~~~~~i~lp-GgHHfd-~dy~~La~~Il~~l~~ 191 (192)
T PF06057_consen 140 APVQCIYGEDEDDS-----LCPSLRQPGVEVIALP-GGHHFD-GDYDALAKRILDALKA 191 (192)
T ss_pred CeEEEEEcCCCCCC-----cCccccCCCcEEEEcC-CCcCCC-CCHHHHHHHHHHHHhc
Confidence 49999999887642 1122333678889998 577744 5577888888776653
No 125
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=96.78 E-value=0.0012 Score=54.89 Aligned_cols=33 Identities=12% Similarity=0.116 Sum_probs=30.3
Q ss_pred CceecchhHHHHHHHHHhcCCccceEEEecCCC
Q 027174 1 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLC 33 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~ 33 (227)
+++|+||||..|+.++.+||+++.+++.+++..
T Consensus 291 ~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 291 VVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred EEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 478999999999999999999999999998753
No 126
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=96.67 E-value=0.033 Score=46.05 Aligned_cols=63 Identities=8% Similarity=0.133 Sum_probs=46.0
Q ss_pred cCcccccEEEEecCCCccc--chHHHHHhhhcCCCcEEEE---ecCCCCCCC---ccChHHHHHHHHHHHhhC
Q 027174 117 LRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVE---VQACGSMVT---EEQPHAMLIPMEYFLMGY 181 (227)
Q Consensus 117 l~~i~~Pvlii~G~~D~~~--~~~~~~~~~~~~~~~~~~~---i~~~gH~~~---~e~p~~~~~~i~~fl~~~ 181 (227)
+.++++|+.+.+|++|.+. ++...+...+ +++.... +++=.|+=+ .+.++.+.+.|.++++..
T Consensus 328 l~~i~~P~~l~~g~~D~l~~~~DV~~~~~~~--~~~~~~~~~~~~~ynHlDFi~g~da~~~vy~~vi~~~~~~ 398 (403)
T KOG2624|consen 328 LTNIKVPTALYYGDNDWLADPEDVLILLLVL--PNSVIKYIVPIPEYNHLDFIWGLDAKEEVYDPVIERLRLF 398 (403)
T ss_pred ccccccCEEEEecCCcccCCHHHHHHHHHhc--ccccccccccCCCccceeeeeccCcHHHHHHHHHHHHHhh
Confidence 6788999999999999987 4555455555 4443322 677788432 467999999999999864
No 127
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=96.54 E-value=0.0018 Score=49.81 Aligned_cols=33 Identities=18% Similarity=0.218 Sum_probs=30.5
Q ss_pred ceecchhHHHHHHHHHhcCCccceEEEecCCCC
Q 027174 2 CMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 34 (227)
Q Consensus 2 lvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~ 34 (227)
++|||+||.+++.....+|+.+...++++|..-
T Consensus 141 i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlW 173 (264)
T COG2819 141 IIGHSLGGLFVLFALLTYPDCFGRYGLISPSLW 173 (264)
T ss_pred eeeecchhHHHHHHHhcCcchhceeeeecchhh
Confidence 789999999999999999999999999988653
No 128
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=96.54 E-value=0.027 Score=45.07 Aligned_cols=46 Identities=13% Similarity=-0.005 Sum_probs=34.3
Q ss_pred cccEEEEecCCCcccchHHHHHhhhcC--CCcEEEEecCCCCCCCccC
Q 027174 121 QCRSLIFVGESSPFHSEAVHMTSKIDR--RYSALVEVQACGSMVTEEQ 166 (227)
Q Consensus 121 ~~Pvlii~G~~D~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~ 166 (227)
-.|+++++|+.|.+.++...+.+++.. ..+++..+++..|.+..-.
T Consensus 245 lPP~~i~~a~~D~l~~~~~~~a~~L~~agv~~~~~~~~g~~H~f~~~~ 292 (312)
T COG0657 245 LPPTLIQTAEFDPLRDEGEAYAERLRAAGVPVELRVYPGMIHGFDLLT 292 (312)
T ss_pred CCCEEEEecCCCcchhHHHHHHHHHHHcCCeEEEEEeCCcceeccccC
Confidence 458999999999998777776666632 3457889999999654333
No 129
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=96.30 E-value=0.003 Score=52.26 Aligned_cols=34 Identities=9% Similarity=0.135 Sum_probs=29.5
Q ss_pred CceecchhHHHHHHHHHhcCC------ccceEEEecCCCC
Q 027174 1 MCMGVTAGAYILTLFAMKYRH------RVLGLILVSPLCK 34 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~------~V~~lili~~~~~ 34 (227)
+||||||||.++..+....+. .|+++|.++++..
T Consensus 122 ~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~ 161 (389)
T PF02450_consen 122 VLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPFG 161 (389)
T ss_pred EEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCCC
Confidence 589999999999999998853 5999999997765
No 130
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=96.24 E-value=0.015 Score=42.59 Aligned_cols=59 Identities=10% Similarity=0.134 Sum_probs=45.0
Q ss_pred cCcccccEEEEecCCCcccchHHH--HHhhhcCCCcEEEEecCCCCCCCccChHHHHHHHHHHHh
Q 027174 117 LRKLQCRSLIFVGESSPFHSEAVH--MTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLM 179 (227)
Q Consensus 117 l~~i~~Pvlii~G~~D~~~~~~~~--~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 179 (227)
+....+|.++|+|+.|.+++.... +++.. ..+++.+++++||++ .+-+.+.+.+.+||.
T Consensus 145 l~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~~---~~~~i~i~~a~HFF~-gKl~~l~~~i~~~l~ 205 (210)
T COG2945 145 LAPCPSPGLVIQGDADDVVDLVAVLKWQESI---KITVITIPGADHFFH-GKLIELRDTIADFLE 205 (210)
T ss_pred ccCCCCCceeEecChhhhhcHHHHHHhhcCC---CCceEEecCCCceec-ccHHHHHHHHHHHhh
Confidence 445578999999999988743333 33333 467899999999966 567789999999996
No 131
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=96.21 E-value=0.013 Score=49.60 Aligned_cols=33 Identities=30% Similarity=0.381 Sum_probs=29.5
Q ss_pred CcEEEEecCCCCCCCccChHHHHHHHHHHHhhC
Q 027174 149 YSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 181 (227)
Q Consensus 149 ~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 181 (227)
+..++.+.++||+++.|+|+.+.+.+.+|+...
T Consensus 427 ~l~~~~V~~AGH~vp~d~P~~~~~~i~~fl~~~ 459 (462)
T PTZ00472 427 GFSFVQVYNAGHMVPMDQPAVALTMINRFLRNR 459 (462)
T ss_pred CeEEEEECCCCccChhhHHHHHHHHHHHHHcCC
Confidence 466788899999999999999999999999763
No 132
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=96.21 E-value=0.028 Score=50.49 Aligned_cols=62 Identities=8% Similarity=0.093 Sum_probs=44.6
Q ss_pred cccccE-EEEecCCCccc--chHHHHHhhhcC--CCcEEEEecCCCCCCCccCh-HHHHHHHHHHHhh
Q 027174 119 KLQCRS-LIFVGESSPFH--SEAVHMTSKIDR--RYSALVEVQACGSMVTEEQP-HAMLIPMEYFLMG 180 (227)
Q Consensus 119 ~i~~Pv-lii~G~~D~~~--~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p-~~~~~~i~~fl~~ 180 (227)
.++.|. |+++|+.|.-+ +.+..+.+.+.. -..++.++|+.+|.+..-.. ..+...+..|++.
T Consensus 679 ~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~~~~~~~~~~~~~~~~ 746 (755)
T KOG2100|consen 679 NIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYVEVISHLYEKLDRFLRD 746 (755)
T ss_pred hhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccccccchHHHHHHHHHHHHH
Confidence 344454 99999999887 555556555532 22688999999999876443 5677888899884
No 133
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=96.20 E-value=0.067 Score=43.26 Aligned_cols=63 Identities=10% Similarity=0.002 Sum_probs=45.9
Q ss_pred CcccccEEEEecCCCcccchHHHHHhhhcCCCc-EEEEecCCCCCCCccChHHHHHHHHHHHhhCC
Q 027174 118 RKLQCRSLIFVGESSPFHSEAVHMTSKIDRRYS-ALVEVQACGSMVTEEQPHAMLIPMEYFLMGYG 182 (227)
Q Consensus 118 ~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~-~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 182 (227)
.++.+|+=+-.+..|...-.-..+..+. +|. .....+++|||..+|.|+.+++.+..|++...
T Consensus 401 ~~v~vPtg~a~f~~el~~~~~~~lrdky--~nL~~~s~~~~GGhFaalE~p~~La~D~~~FV~~~~ 464 (469)
T KOG2565|consen 401 VQVRVPTGCARFKFELWHTSDDVLRDKY--PNLTHSSYHPKGGHFAALEDPKKLAQDFFSFVEKLN 464 (469)
T ss_pred cccccchhhhccccchhhCcHHHHhhhc--ccceeeEeccCCcchhhhhCcHHHHHHHHHHHHHHH
Confidence 4567788777777776542222355555 443 45667899999999999999999999998754
No 134
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.18 E-value=0.0061 Score=46.32 Aligned_cols=34 Identities=12% Similarity=0.071 Sum_probs=28.2
Q ss_pred CceecchhHHHHHHHHHhcC----CccceEEEecCCCC
Q 027174 1 MCMGVTAGAYILTLFAMKYR----HRVLGLILVSPLCK 34 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P----~~V~~lili~~~~~ 34 (227)
++.|||.||.+|...|...+ ++|.++...|++..
T Consensus 87 ~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf 124 (224)
T PF11187_consen 87 YVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGF 124 (224)
T ss_pred EEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCC
Confidence 47899999999999998843 57889888887654
No 135
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=95.94 E-value=0.004 Score=54.51 Aligned_cols=33 Identities=15% Similarity=0.135 Sum_probs=23.8
Q ss_pred CceecchhHHHHHHHHHh---cCCccceEEEecCCC
Q 027174 1 MCMGVTAGAYILTLFAMK---YRHRVLGLILVSPLC 33 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~---~P~~V~~lili~~~~ 33 (227)
|+|||||||.||...+.. .++.|.-++..+++.
T Consensus 185 ILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH 220 (973)
T KOG3724|consen 185 ILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPH 220 (973)
T ss_pred EEEeccchhHHHHHHHhhhhhccchhhhhhhhcCcc
Confidence 689999999999876642 345676666666543
No 136
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=95.91 E-value=0.0055 Score=46.77 Aligned_cols=33 Identities=21% Similarity=0.337 Sum_probs=22.9
Q ss_pred CceecchhHHHHHHHHHhcC-----CccceEEEecCCC
Q 027174 1 MCMGVTAGAYILTLFAMKYR-----HRVLGLILVSPLC 33 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P-----~~V~~lili~~~~ 33 (227)
++.||||||.+|..+|.... ..+..+.+-+|..
T Consensus 131 ~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~v 168 (229)
T cd00519 131 IVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPRV 168 (229)
T ss_pred EEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCCC
Confidence 47899999999999888643 3455544444443
No 137
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=95.89 E-value=0.024 Score=44.51 Aligned_cols=33 Identities=12% Similarity=0.153 Sum_probs=27.4
Q ss_pred ceecchhHHHHHHHHHhcCCccceEEEecCCCC
Q 027174 2 CMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 34 (227)
Q Consensus 2 lvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~ 34 (227)
.+|.|++|..++..|+..|..+++++...+...
T Consensus 105 m~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d 137 (272)
T PF02129_consen 105 MYGISYGGFTQWAAAARRPPHLKAIVPQSGWSD 137 (272)
T ss_dssp EEEETHHHHHHHHHHTTT-TTEEEEEEESE-SB
T ss_pred eeccCHHHHHHHHHHhcCCCCceEEEecccCCc
Confidence 479999999999999999999999998876543
No 138
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.82 E-value=0.035 Score=42.38 Aligned_cols=60 Identities=7% Similarity=-0.013 Sum_probs=44.0
Q ss_pred CcccccEEEEecCCCcccch--HHHHHhhhcCCCcEEEEecCCCCCCCccChHHHHHHHHHHH
Q 027174 118 RKLQCRSLIFVGESSPFHSE--AVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFL 178 (227)
Q Consensus 118 ~~i~~Pvlii~G~~D~~~~~--~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 178 (227)
.+-.+-+.+.+|..|.+++. ...+.+.+...+.++-. .++.|.+...+.+..+..+.+.+
T Consensus 239 een~d~l~Fyygt~DgW~p~~~~d~~kdd~~eed~~Lde-dki~HAFV~~~~q~ma~~v~d~~ 300 (301)
T KOG3975|consen 239 EENLDSLWFYYGTNDGWVPSHYYDYYKDDVPEEDLKLDE-DKIPHAFVVKHAQYMANAVFDMI 300 (301)
T ss_pred HhcCcEEEEEccCCCCCcchHHHHHHhhhcchhceeecc-ccCCcceeecccHHHHHHHHHhh
Confidence 34456789999999999953 33477777323344444 78999999999999998887765
No 139
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=95.81 E-value=0.0055 Score=42.73 Aligned_cols=19 Identities=21% Similarity=0.294 Sum_probs=16.4
Q ss_pred CceecchhHHHHHHHHHhc
Q 027174 1 MCMGVTAGAYILTLFAMKY 19 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~ 19 (227)
++.|||+||.+|..++...
T Consensus 67 ~itGHSLGGalA~l~a~~l 85 (140)
T PF01764_consen 67 VITGHSLGGALASLAAADL 85 (140)
T ss_dssp EEEEETHHHHHHHHHHHHH
T ss_pred hhhccchHHHHHHHHHHhh
Confidence 3689999999999999864
No 140
>COG0627 Predicted esterase [General function prediction only]
Probab=95.78 E-value=0.0057 Score=48.89 Aligned_cols=35 Identities=20% Similarity=0.172 Sum_probs=30.8
Q ss_pred ceecchhHHHHHHHHHhcCCccceEEEecCCCCCC
Q 027174 2 CMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAP 36 (227)
Q Consensus 2 lvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~~~ 36 (227)
++||||||.=|+.+|++||+++..+...++.....
T Consensus 156 I~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s 190 (316)
T COG0627 156 IAGHSMGGYGALKLALKHPDRFKSASSFSGILSPS 190 (316)
T ss_pred eEEEeccchhhhhhhhhCcchhceecccccccccc
Confidence 68999999999999999999999998888766543
No 141
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=95.67 E-value=0.014 Score=44.16 Aligned_cols=33 Identities=18% Similarity=0.309 Sum_probs=30.0
Q ss_pred ceecchhHHHHHHHHHhcCCccceEEEecCCCC
Q 027174 2 CMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 34 (227)
Q Consensus 2 lvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~ 34 (227)
+.|+|.||+.+..++..||+++.++.+.+..+.
T Consensus 101 v~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~ 133 (220)
T PF10503_consen 101 VTGLSNGGMMANVLACAYPDLFAAVAVVSGVPY 133 (220)
T ss_pred eEEECHHHHHHHHHHHhCCccceEEEeeccccc
Confidence 689999999999999999999999988877654
No 142
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=95.63 E-value=0.033 Score=41.78 Aligned_cols=65 Identities=9% Similarity=0.085 Sum_probs=43.6
Q ss_pred ccCcccccEEEEecCCCccc--chHHHHHhhhcC-C--CcEEEEecCCCCCCC-----ccChH------HHHHHHHHHHh
Q 027174 116 GLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDR-R--YSALVEVQACGSMVT-----EEQPH------AMLIPMEYFLM 179 (227)
Q Consensus 116 ~l~~i~~Pvlii~G~~D~~~--~~~~~~~~~~~~-~--~~~~~~i~~~gH~~~-----~e~p~------~~~~~i~~fl~ 179 (227)
...++++|++++.|+.|.++ .....+.+.+.. + +.++.++++-+|-.. .+.|+ +..+.+.+|++
T Consensus 159 D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~ 238 (242)
T KOG3043|consen 159 DIANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFK 238 (242)
T ss_pred HHhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHH
Confidence 35678999999999999997 344445555532 1 246999999999655 34443 34445566665
Q ss_pred h
Q 027174 180 G 180 (227)
Q Consensus 180 ~ 180 (227)
.
T Consensus 239 ~ 239 (242)
T KOG3043|consen 239 H 239 (242)
T ss_pred H
Confidence 4
No 143
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=95.50 E-value=0.012 Score=45.52 Aligned_cols=32 Identities=25% Similarity=0.341 Sum_probs=29.3
Q ss_pred ceecchhHHHHHHHHHhc-----CCccceEEEecCCC
Q 027174 2 CMGVTAGAYILTLFAMKY-----RHRVLGLILVSPLC 33 (227)
Q Consensus 2 lvGhS~Gg~ia~~~A~~~-----P~~V~~lili~~~~ 33 (227)
+.|||-||-+|..++..+ +.++++++++||.-
T Consensus 95 l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 95 LAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred EeeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 689999999999999998 66899999999976
No 144
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=95.45 E-value=0.016 Score=47.81 Aligned_cols=33 Identities=18% Similarity=0.036 Sum_probs=23.4
Q ss_pred CceecchhHHHHHHHHHhcCCccceEEEecCCCC
Q 027174 1 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 34 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~ 34 (227)
+++|||+||+.++..+.+- .+++..|++|++..
T Consensus 231 ~~~GHSFGGATa~~~l~~d-~r~~~~I~LD~W~~ 263 (379)
T PF03403_consen 231 GLAGHSFGGATALQALRQD-TRFKAGILLDPWMF 263 (379)
T ss_dssp EEEEETHHHHHHHHHHHH--TT--EEEEES---T
T ss_pred eeeecCchHHHHHHHHhhc-cCcceEEEeCCccc
Confidence 3789999999999877666 78999999998754
No 145
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=95.41 E-value=0.023 Score=47.23 Aligned_cols=59 Identities=25% Similarity=0.384 Sum_probs=40.9
Q ss_pred cccEEEEecCCCcccc--hHHHHHhhhc------------------------CCCcEEEEecCCCCCCCccChHHHHHHH
Q 027174 121 QCRSLIFVGESSPFHS--EAVHMTSKID------------------------RRYSALVEVQACGSMVTEEQPHAMLIPM 174 (227)
Q Consensus 121 ~~Pvlii~G~~D~~~~--~~~~~~~~~~------------------------~~~~~~~~i~~~gH~~~~e~p~~~~~~i 174 (227)
.++||+.+|+.|.+++ ..+.+.+.+. ..+.+++.+.+|||+++.++|+...+.+
T Consensus 330 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGHmvP~dqP~~a~~m~ 409 (415)
T PF00450_consen 330 GIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGHMVPQDQPEAALQMF 409 (415)
T ss_dssp T-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--SSHHHHSHHHHHHHH
T ss_pred cceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEEcCCcccChhhCHHHHHHHH
Confidence 3899999999999873 2222322221 0235678899999999999999999999
Q ss_pred HHHHh
Q 027174 175 EYFLM 179 (227)
Q Consensus 175 ~~fl~ 179 (227)
.+||+
T Consensus 410 ~~fl~ 414 (415)
T PF00450_consen 410 RRFLK 414 (415)
T ss_dssp HHHHC
T ss_pred HHHhc
Confidence 99986
No 146
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=95.33 E-value=0.021 Score=46.16 Aligned_cols=33 Identities=12% Similarity=0.161 Sum_probs=27.9
Q ss_pred ceecchhHHHHHHHHHhcCC--ccceEEEecCCCC
Q 027174 2 CMGVTAGAYILTLFAMKYRH--RVLGLILVSPLCK 34 (227)
Q Consensus 2 lvGhS~Gg~ia~~~A~~~P~--~V~~lili~~~~~ 34 (227)
+||||+||.||-..+..... +|..++.+||...
T Consensus 154 lIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP 188 (331)
T PF00151_consen 154 LIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGP 188 (331)
T ss_dssp EEEETCHHHHHHHHHHHTTT---SSEEEEES-B-T
T ss_pred EEeeccchhhhhhhhhhccCcceeeEEEecCcccc
Confidence 79999999999999998887 9999999998775
No 147
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=95.22 E-value=0.24 Score=37.97 Aligned_cols=51 Identities=14% Similarity=0.225 Sum_probs=33.1
Q ss_pred cCcccccEEEEecCCCccc--chHHHHHhhhcCCCcEEEEecCCCCCCCccChH
Q 027174 117 LRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPH 168 (227)
Q Consensus 117 l~~i~~Pvlii~G~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~ 168 (227)
+..+.+|++.+++++|.++ ....++...+.++.++++.++|++|-+. |+|-
T Consensus 191 ~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~HdL~-enl~ 243 (294)
T PF02273_consen 191 MKRLSIPFIAFTANDDDWVKQSEVEELLDNINSNKCKLYSLPGSSHDLG-ENLV 243 (294)
T ss_dssp HTT--S-EEEEEETT-TTS-HHHHHHHHTT-TT--EEEEEETT-SS-TT-SSHH
T ss_pred HhhCCCCEEEEEeCCCccccHHHHHHHHHhcCCCceeEEEecCccchhh-hChH
Confidence 4667999999999999998 3455577777667889999999999965 5553
No 148
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=95.11 E-value=0.08 Score=41.37 Aligned_cols=66 Identities=20% Similarity=0.200 Sum_probs=46.6
Q ss_pred ccCccc-ccEEEEecCCCccc--chHHHHHhhhcCCCcEEEEecCCCCCCCccChH---HHHHHHHHHHhhC
Q 027174 116 GLRKLQ-CRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPH---AMLIPMEYFLMGY 181 (227)
Q Consensus 116 ~l~~i~-~Pvlii~G~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~---~~~~~i~~fl~~~ 181 (227)
.+.++. +|+++++|..|..+ ..+..+.........+...+++++|......+. +....+.+|+.+.
T Consensus 226 ~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~ 297 (299)
T COG1073 226 DAEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERH 297 (299)
T ss_pred hHhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHHh
Confidence 344555 79999999999988 345555555532245778889999988865544 5777788888763
No 149
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=95.04 E-value=0.018 Score=46.74 Aligned_cols=33 Identities=12% Similarity=0.169 Sum_probs=30.1
Q ss_pred ceecchhHHHHHHHHHhcC--CccceEEEecCCCC
Q 027174 2 CMGVTAGAYILTLFAMKYR--HRVLGLILVSPLCK 34 (227)
Q Consensus 2 lvGhS~Gg~ia~~~A~~~P--~~V~~lili~~~~~ 34 (227)
++||||||.++..++..++ .+|+.++.++++-.
T Consensus 131 LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~ 165 (336)
T COG1075 131 LIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPHH 165 (336)
T ss_pred EEeecccchhhHHHHhhcCccceEEEEEEeccCCC
Confidence 7899999999999999998 89999999997655
No 150
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=94.99 E-value=0.027 Score=41.11 Aligned_cols=34 Identities=24% Similarity=0.235 Sum_probs=29.1
Q ss_pred CceecchhHHHHHHHHHhcCCccceEEEecCCCC
Q 027174 1 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 34 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~ 34 (227)
.++|||+|+.++-..+...+..++.+|+++++..
T Consensus 112 tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~ 145 (177)
T PF06259_consen 112 TVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGM 145 (177)
T ss_pred EEEEecchhHHHHHHhhhCCCCcccEEEECCCCC
Confidence 3799999999999988887889999999987544
No 151
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=94.99 E-value=0.015 Score=45.54 Aligned_cols=34 Identities=12% Similarity=0.055 Sum_probs=29.7
Q ss_pred CceecchhHHHHHHHHHhcCCccceEEEecCCCC
Q 027174 1 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 34 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~ 34 (227)
+|.|-|+||.+++..+.+||+++-.++.-++...
T Consensus 180 ~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~ 213 (299)
T COG2382 180 VLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFW 213 (299)
T ss_pred EEeccccccHHHHHHHhcCchhhceeeccCCccc
Confidence 4789999999999999999999988877776543
No 152
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=94.86 E-value=0.16 Score=39.41 Aligned_cols=66 Identities=14% Similarity=0.073 Sum_probs=45.1
Q ss_pred CCccccCcccccEEEEecCCCcccchHHH--HHhhhcCCCcEEEEecCCCCCCCccChHHHHHHHHHHHhhC
Q 027174 112 DISEGLRKLQCRSLIFVGESSPFHSEAVH--MTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 181 (227)
Q Consensus 112 ~~~~~l~~i~~Pvlii~G~~D~~~~~~~~--~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 181 (227)
|......++++|+|+..|-.|++++++.. +.+++. ...+..+++.-+|. +-|.-..+.+..|++..
T Consensus 250 D~~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~-~~K~i~iy~~~aHe---~~p~~~~~~~~~~l~~l 317 (321)
T COG3458 250 DIVNLAARIKVPVLMSVGLMDPVCPPSTQFAAYNALT-TSKTIEIYPYFAHE---GGPGFQSRQQVHFLKIL 317 (321)
T ss_pred hhhhHHHhhccceEEeecccCCCCCChhhHHHhhccc-CCceEEEeeccccc---cCcchhHHHHHHHHHhh
Confidence 34444567899999999999999955544 445552 33457777765654 55666777777887653
No 153
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=94.79 E-value=0.13 Score=41.39 Aligned_cols=60 Identities=17% Similarity=0.303 Sum_probs=43.0
Q ss_pred cccEEEEecCCCcccc--hHHHHHhhhc-----------------------CCCcEEEEecCCCCCCCccChHHHHHHHH
Q 027174 121 QCRSLIFVGESSPFHS--EAVHMTSKID-----------------------RRYSALVEVQACGSMVTEEQPHAMLIPME 175 (227)
Q Consensus 121 ~~Pvlii~G~~D~~~~--~~~~~~~~~~-----------------------~~~~~~~~i~~~gH~~~~e~p~~~~~~i~ 175 (227)
.++||+..|+.|.+++ ..+.+.+.++ ..+.++..+.+|||+++ .+|+...+.+.
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~ 311 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 311 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHH
Confidence 4799999999997762 1112222211 01267788889999997 59999999999
Q ss_pred HHHhhC
Q 027174 176 YFLMGY 181 (227)
Q Consensus 176 ~fl~~~ 181 (227)
.|++..
T Consensus 312 ~fi~~~ 317 (319)
T PLN02213 312 RWISGQ 317 (319)
T ss_pred HHHcCC
Confidence 999763
No 154
>PLN02454 triacylglycerol lipase
Probab=94.23 E-value=0.05 Score=44.90 Aligned_cols=18 Identities=33% Similarity=0.405 Sum_probs=15.8
Q ss_pred CceecchhHHHHHHHHHh
Q 027174 1 MCMGVTAGAYILTLFAMK 18 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~ 18 (227)
++.||||||++|+..|..
T Consensus 231 ~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 231 VLTGHSLGASLATLAAFD 248 (414)
T ss_pred EEEecCHHHHHHHHHHHH
Confidence 368999999999999865
No 155
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=94.20 E-value=0.035 Score=42.74 Aligned_cols=34 Identities=21% Similarity=0.327 Sum_probs=29.0
Q ss_pred ceecchhHHHHHHHHHhcCC--ccceEEEecCCCCC
Q 027174 2 CMGVTAGAYILTLFAMKYRH--RVLGLILVSPLCKA 35 (227)
Q Consensus 2 lvGhS~Gg~ia~~~A~~~P~--~V~~lili~~~~~~ 35 (227)
++|||.||-.|..+|..|.. .+.+||.+||....
T Consensus 124 l~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~ 159 (307)
T PF07224_consen 124 LSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGT 159 (307)
T ss_pred EeecCCccHHHHHHHhcccccCchhheecccccCCC
Confidence 68999999999999998842 48899999988763
No 156
>PLN02162 triacylglycerol lipase
Probab=94.10 E-value=0.053 Score=45.31 Aligned_cols=17 Identities=24% Similarity=0.452 Sum_probs=14.9
Q ss_pred CceecchhHHHHHHHHH
Q 027174 1 MCMGVTAGAYILTLFAM 17 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~ 17 (227)
++.|||+||++|..+|.
T Consensus 281 iVTGHSLGGALAtLaAa 297 (475)
T PLN02162 281 ILTGHSLGGALAALFPA 297 (475)
T ss_pred EEEecChHHHHHHHHHH
Confidence 47899999999999865
No 157
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=94.03 E-value=0.086 Score=40.48 Aligned_cols=60 Identities=8% Similarity=0.167 Sum_probs=44.8
Q ss_pred cccccEEEEecCCCccc--chHHHHHhhh--cCCCcEEEEecCCCCCCCc-cChHHHHHHHHHHH
Q 027174 119 KLQCRSLIFVGESSPFH--SEAVHMTSKI--DRRYSALVEVQACGSMVTE-EQPHAMLIPMEYFL 178 (227)
Q Consensus 119 ~i~~Pvlii~G~~D~~~--~~~~~~~~~~--~~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl 178 (227)
...+|-++++++.|.++ ++.++..+.. .+-+++.+.+++++|.-|+ ++|++..+.+.+|+
T Consensus 176 ~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 176 PSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 44689999999999998 3333333222 1234778889999998887 57999999999885
No 158
>PLN02571 triacylglycerol lipase
Probab=93.93 E-value=0.058 Score=44.55 Aligned_cols=18 Identities=33% Similarity=0.346 Sum_probs=15.9
Q ss_pred CceecchhHHHHHHHHHh
Q 027174 1 MCMGVTAGAYILTLFAMK 18 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~ 18 (227)
++.||||||++|+..|..
T Consensus 229 ~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 229 TICGHSLGAALATLNAVD 246 (413)
T ss_pred EEeccchHHHHHHHHHHH
Confidence 468999999999999875
No 159
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=93.90 E-value=0.029 Score=42.07 Aligned_cols=34 Identities=15% Similarity=0.338 Sum_probs=26.2
Q ss_pred CceecchhHHHHHHHHH--hcCCccceEEEecCCCC
Q 027174 1 MCMGVTAGAYILTLFAM--KYRHRVLGLILVSPLCK 34 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~--~~P~~V~~lili~~~~~ 34 (227)
+++|||-|..=.+.|.. ..|..|.+.|+.+|...
T Consensus 110 VL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSD 145 (299)
T KOG4840|consen 110 VLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSD 145 (299)
T ss_pred EEEecCccchHHHHHHHhccchHHHHHHHHhCccch
Confidence 47999999998888883 34567888888877665
No 160
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=93.78 E-value=0.061 Score=40.76 Aligned_cols=17 Identities=18% Similarity=0.157 Sum_probs=13.7
Q ss_pred CceecchhHHHHHHHHH
Q 027174 1 MCMGVTAGAYILTLFAM 17 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~ 17 (227)
+.|||||||.|+..+..
T Consensus 81 sfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 81 SFIGHSLGGLIARYALG 97 (217)
T ss_pred eEEEecccHHHHHHHHH
Confidence 47999999999875554
No 161
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=93.73 E-value=0.31 Score=42.38 Aligned_cols=63 Identities=13% Similarity=-0.006 Sum_probs=42.3
Q ss_pred CcccccEEEEecCCCccc--chHHHHHhhhc--CCCcEEEEecCCCCCCC-ccChHHHHHHHHHHHhh
Q 027174 118 RKLQCRSLIFVGESSPFH--SEAVHMTSKID--RRYSALVEVQACGSMVT-EEQPHAMLIPMEYFLMG 180 (227)
Q Consensus 118 ~~i~~Pvlii~G~~D~~~--~~~~~~~~~~~--~~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~ 180 (227)
+.-....++++|--|.-+ .....+...+- ++--++.++|+-.|.+= .|.-+-.-..+..|+++
T Consensus 799 pdepnRLlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~IfP~ERHsiR~~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 799 PDEPNRLLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQIFPNERHSIRNPESGIYYEARLLHFLQE 866 (867)
T ss_pred CCCCceEEEEecccccchhhhhHHHHHHHHHhCCCceEEEEccccccccCCCccchhHHHHHHHHHhh
Confidence 333456899999999876 22222322221 24468999999999874 45556677788899876
No 162
>PLN02209 serine carboxypeptidase
Probab=93.68 E-value=0.27 Score=41.36 Aligned_cols=60 Identities=18% Similarity=0.254 Sum_probs=43.6
Q ss_pred cccEEEEecCCCcccc--hHHHHHhhhc----------------------CCC-cEEEEecCCCCCCCccChHHHHHHHH
Q 027174 121 QCRSLIFVGESSPFHS--EAVHMTSKID----------------------RRY-SALVEVQACGSMVTEEQPHAMLIPME 175 (227)
Q Consensus 121 ~~Pvlii~G~~D~~~~--~~~~~~~~~~----------------------~~~-~~~~~i~~~gH~~~~e~p~~~~~~i~ 175 (227)
.++|++..|+.|.+++ ..+.+.+.++ -.+ .+++.+.+|||+++ .+|++..+.+.
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~al~m~~ 429 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEESSIMFQ 429 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHHHHHHHH
Confidence 4799999999998862 2222222221 022 67788899999996 69999999999
Q ss_pred HHHhhC
Q 027174 176 YFLMGY 181 (227)
Q Consensus 176 ~fl~~~ 181 (227)
+|+...
T Consensus 430 ~fi~~~ 435 (437)
T PLN02209 430 RWISGQ 435 (437)
T ss_pred HHHcCC
Confidence 999653
No 163
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=93.56 E-value=0.32 Score=40.93 Aligned_cols=60 Identities=17% Similarity=0.298 Sum_probs=43.2
Q ss_pred cccEEEEecCCCcccc--hHHHHHhhhc---------------------C-C-CcEEEEecCCCCCCCccChHHHHHHHH
Q 027174 121 QCRSLIFVGESSPFHS--EAVHMTSKID---------------------R-R-YSALVEVQACGSMVTEEQPHAMLIPME 175 (227)
Q Consensus 121 ~~Pvlii~G~~D~~~~--~~~~~~~~~~---------------------~-~-~~~~~~i~~~gH~~~~e~p~~~~~~i~ 175 (227)
.++||+..|+.|.+++ ..+.+.+.++ . . +.+++.+-+|||+++ .+|++..+.+.
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~~ 425 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 425 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHHH
Confidence 4799999999998762 2222222110 0 1 267788899999997 69999999999
Q ss_pred HHHhhC
Q 027174 176 YFLMGY 181 (227)
Q Consensus 176 ~fl~~~ 181 (227)
.|+...
T Consensus 426 ~Fi~~~ 431 (433)
T PLN03016 426 RWISGQ 431 (433)
T ss_pred HHHcCC
Confidence 999763
No 164
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=93.55 E-value=1.6 Score=34.64 Aligned_cols=45 Identities=13% Similarity=0.131 Sum_probs=31.3
Q ss_pred cccccEEEEecCCCcccc--hHHHHHhhhc--C-CCcEEEEecCCCCCCC
Q 027174 119 KLQCRSLIFVGESSPFHS--EAVHMTSKID--R-RYSALVEVQACGSMVT 163 (227)
Q Consensus 119 ~i~~Pvlii~G~~D~~~~--~~~~~~~~~~--~-~~~~~~~i~~~gH~~~ 163 (227)
..++|+++.+|..|.+++ ....+.+.+. + .+++++.++..+|...
T Consensus 217 ~P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~ 266 (290)
T PF03583_consen 217 TPTVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGA 266 (290)
T ss_pred CCCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhh
Confidence 347899999999999883 3333333332 2 3567888889999764
No 165
>PLN00413 triacylglycerol lipase
Probab=93.51 E-value=0.082 Score=44.33 Aligned_cols=17 Identities=24% Similarity=0.419 Sum_probs=15.1
Q ss_pred CceecchhHHHHHHHHH
Q 027174 1 MCMGVTAGAYILTLFAM 17 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~ 17 (227)
++.|||+||++|..+|.
T Consensus 287 iVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 287 ILSGHSLGGALAILFTA 303 (479)
T ss_pred EEEecCHHHHHHHHHHH
Confidence 47899999999999885
No 166
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=93.42 E-value=0.063 Score=41.12 Aligned_cols=33 Identities=18% Similarity=0.325 Sum_probs=27.4
Q ss_pred ceecchhHHHHHHHHHhcCC-----ccceEEEecCCCC
Q 027174 2 CMGVTAGAYILTLFAMKYRH-----RVLGLILVSPLCK 34 (227)
Q Consensus 2 lvGhS~Gg~ia~~~A~~~P~-----~V~~lili~~~~~ 34 (227)
+|||||||.-...|+..|.. .+..+|.++....
T Consensus 140 ~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 140 AVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred eeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 58999999999999998864 3888888887654
No 167
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=93.36 E-value=0.044 Score=43.85 Aligned_cols=32 Identities=19% Similarity=0.328 Sum_probs=27.7
Q ss_pred CceecchhHHHHHHHHHhcCCccceEEEecCCC
Q 027174 1 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLC 33 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~ 33 (227)
|+.|||.||.-+...|..||+ |+++||-++.-
T Consensus 314 ilygWSIGGF~~~waAs~YPd-VkavvLDAtFD 345 (517)
T KOG1553|consen 314 ILYGWSIGGFPVAWAASNYPD-VKAVVLDATFD 345 (517)
T ss_pred EEEEeecCCchHHHHhhcCCC-ceEEEeecchh
Confidence 678999999999999999997 88888876543
No 168
>COG4099 Predicted peptidase [General function prediction only]
Probab=93.20 E-value=0.061 Score=42.21 Aligned_cols=33 Identities=12% Similarity=0.166 Sum_probs=30.2
Q ss_pred ceecchhHHHHHHHHHhcCCccceEEEecCCCC
Q 027174 2 CMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 34 (227)
Q Consensus 2 lvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~ 34 (227)
++|.|+||.-++.++.++|+.+++.+++++...
T Consensus 273 viGlSrG~~gt~al~~kfPdfFAaa~~iaG~~d 305 (387)
T COG4099 273 VIGLSRGGFGTWALAEKFPDFFAAAVPIAGGGD 305 (387)
T ss_pred EEeecCcchhhHHHHHhCchhhheeeeecCCCc
Confidence 689999999999999999999999999987643
No 169
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=93.17 E-value=0.35 Score=40.74 Aligned_cols=63 Identities=24% Similarity=0.329 Sum_probs=45.2
Q ss_pred ccEEEEecCCCcccch--HHHHHhhh------------c------C-----CCcEEEEecCCCCCCCccChHHHHHHHHH
Q 027174 122 CRSLIFVGESSPFHSE--AVHMTSKI------------D------R-----RYSALVEVQACGSMVTEEQPHAMLIPMEY 176 (227)
Q Consensus 122 ~Pvlii~G~~D~~~~~--~~~~~~~~------------~------~-----~~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 176 (227)
.++++..|+.|-.++. .+...+.+ . + .+..+..+.|+||+++.++|+.....+.+
T Consensus 364 ~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~~p~~al~m~~~ 443 (454)
T KOG1282|consen 364 YRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYDKPESALIMFQR 443 (454)
T ss_pred eEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCCCcHHHHHHHHH
Confidence 7999999999988631 11111111 0 0 12445788899999999999999999999
Q ss_pred HHhhCCcc
Q 027174 177 FLMGYGLY 184 (227)
Q Consensus 177 fl~~~~~~ 184 (227)
|+......
T Consensus 444 fl~g~~l~ 451 (454)
T KOG1282|consen 444 FLNGQPLP 451 (454)
T ss_pred HHcCCCCC
Confidence 99886543
No 170
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=92.71 E-value=0.18 Score=37.10 Aligned_cols=60 Identities=10% Similarity=0.067 Sum_probs=42.3
Q ss_pred cccEEEEecCCCcccc-----hHHHHHhhhcCCCcEEEEecCCCCCCCccCh---HHHHHHHHHHHhh
Q 027174 121 QCRSLIFVGESSPFHS-----EAVHMTSKIDRRYSALVEVQACGSMVTEEQP---HAMLIPMEYFLMG 180 (227)
Q Consensus 121 ~~Pvlii~G~~D~~~~-----~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p---~~~~~~i~~fl~~ 180 (227)
+++.+.|-|+.|.+.. .+..+...+.......++.+||||+-...-+ +++...|.+|+.+
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQ 201 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHh
Confidence 4678889999999972 3444555553222356778899998766544 5688888999875
No 171
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=92.51 E-value=0.51 Score=40.79 Aligned_cols=50 Identities=12% Similarity=0.172 Sum_probs=39.0
Q ss_pred cccCcccccEEEEecCCCccc--chHHHHHhhhcCCCcEEEEecCCCCCCCcc
Q 027174 115 EGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEE 165 (227)
Q Consensus 115 ~~l~~i~~Pvlii~G~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e 165 (227)
+.+-.++.|+|+|.|..|..+ ....++.+++. ...+++++.+++|.+-.-
T Consensus 298 E~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMq-A~~elhVI~~adhsmaip 349 (784)
T KOG3253|consen 298 EALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQ-AEVELHVIGGADHSMAIP 349 (784)
T ss_pred hhhHhcCCceEEEecCCcccCCHHHHHHHHHHhh-ccceEEEecCCCccccCC
Confidence 346678999999999999998 34455777775 467899999999976543
No 172
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=92.28 E-value=0.16 Score=38.48 Aligned_cols=18 Identities=17% Similarity=0.215 Sum_probs=15.2
Q ss_pred ceecchhHHHHHHHHHhc
Q 027174 2 CMGVTAGAYILTLFAMKY 19 (227)
Q Consensus 2 lvGhS~Gg~ia~~~A~~~ 19 (227)
+|||||||.++..+..-.
T Consensus 79 IVgHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 79 IVGHSMGGTIARYYIKGG 96 (219)
T ss_dssp EEEETCHHHHHHHHHHHC
T ss_pred EEEcCCcCHHHHHHHHHc
Confidence 699999999999887543
No 173
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=92.14 E-value=2.4 Score=34.67 Aligned_cols=65 Identities=17% Similarity=0.135 Sum_probs=47.7
Q ss_pred CcccccEEEEecCCCccc-c-hHHHHHhhhcCCCc-EEEEecCCCCCCCccChHHHHHHHHHHHhhCCcccCC
Q 027174 118 RKLQCRSLIFVGESSPFH-S-EAVHMTSKIDRRYS-ALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLYRPT 187 (227)
Q Consensus 118 ~~i~~Pvlii~G~~D~~~-~-~~~~~~~~~~~~~~-~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~~~~~~ 187 (227)
.++..|-.++.|..|.++ + .+..+.+.+ |+. .+..+||..|..- +..+.+.+..|++++..+++.
T Consensus 326 ~RLalpKyivnaSgDdff~pDsa~lYyd~L--PG~kaLrmvPN~~H~~~---n~~i~esl~~flnrfq~~~~L 393 (507)
T COG4287 326 LRLALPKYIVNASGDDFFVPDSANLYYDDL--PGEKALRMVPNDPHNLI---NQFIKESLEPFLNRFQMYPKL 393 (507)
T ss_pred hhccccceeecccCCcccCCCccceeeccC--CCceeeeeCCCCcchhh---HHHHHHHHHHHHHHHhcCCCC
Confidence 567889999999988876 4 445577888 555 4788999998754 666777788888776555443
No 174
>PLN02324 triacylglycerol lipase
Probab=92.10 E-value=0.16 Score=41.99 Aligned_cols=17 Identities=29% Similarity=0.300 Sum_probs=15.2
Q ss_pred ceecchhHHHHHHHHHh
Q 027174 2 CMGVTAGAYILTLFAMK 18 (227)
Q Consensus 2 lvGhS~Gg~ia~~~A~~ 18 (227)
+.|||+||++|+..|..
T Consensus 219 vTGHSLGGALAtLaA~d 235 (415)
T PLN02324 219 FTGHSLGAVMSVLSAAD 235 (415)
T ss_pred EecCcHHHHHHHHHHHH
Confidence 67999999999999864
No 175
>PLN02310 triacylglycerol lipase
Probab=92.08 E-value=0.089 Score=43.39 Aligned_cols=18 Identities=22% Similarity=0.246 Sum_probs=15.4
Q ss_pred CceecchhHHHHHHHHHh
Q 027174 1 MCMGVTAGAYILTLFAMK 18 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~ 18 (227)
++.|||+||++|+..|..
T Consensus 212 ~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 212 TVTGHSLGGALALLNAYE 229 (405)
T ss_pred EEEcccHHHHHHHHHHHH
Confidence 368999999999998854
No 176
>PLN02408 phospholipase A1
Probab=91.94 E-value=0.09 Score=42.82 Aligned_cols=19 Identities=32% Similarity=0.305 Sum_probs=16.3
Q ss_pred CceecchhHHHHHHHHHhc
Q 027174 1 MCMGVTAGAYILTLFAMKY 19 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~ 19 (227)
++.|||+||++|...|...
T Consensus 203 ~vTGHSLGGALAtLaA~dl 221 (365)
T PLN02408 203 TITGHSLGAALATLTAYDI 221 (365)
T ss_pred EEeccchHHHHHHHHHHHH
Confidence 4689999999999988754
No 177
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=91.80 E-value=0.092 Score=41.55 Aligned_cols=33 Identities=9% Similarity=-0.044 Sum_probs=26.1
Q ss_pred CceecchhHHHHHHHHHhcCCccceEEEecCCCC
Q 027174 1 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 34 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~ 34 (227)
+++|||+||+.+....+.+ .+++..|++|.+..
T Consensus 244 aViGHSFGgAT~i~~ss~~-t~FrcaI~lD~WM~ 276 (399)
T KOG3847|consen 244 AVIGHSFGGATSIASSSSH-TDFRCAIALDAWMF 276 (399)
T ss_pred hheeccccchhhhhhhccc-cceeeeeeeeeeec
Confidence 5899999999998777665 45777788887655
No 178
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=91.40 E-value=0.25 Score=40.40 Aligned_cols=30 Identities=27% Similarity=0.396 Sum_probs=21.8
Q ss_pred ceecchhHHHHHHHHHhcCCccceEEEecCC
Q 027174 2 CMGVTAGAYILTLFAMKYRHRVLGLILVSPL 32 (227)
Q Consensus 2 lvGhS~Gg~ia~~~A~~~P~~V~~lili~~~ 32 (227)
++|+||||..++.+|+.- ++|+..|..+-.
T Consensus 230 ~~GfSmGg~~a~~LaALD-dRIka~v~~~~l 259 (390)
T PF12715_consen 230 CMGFSMGGYRAWWLAALD-DRIKATVANGYL 259 (390)
T ss_dssp EEEEGGGHHHHHHHHHH--TT--EEEEES-B
T ss_pred EEeecccHHHHHHHHHcc-hhhHhHhhhhhh
Confidence 689999999999999886 678777766543
No 179
>PLN02847 triacylglycerol lipase
Probab=91.39 E-value=0.11 Score=44.68 Aligned_cols=18 Identities=17% Similarity=0.191 Sum_probs=15.8
Q ss_pred CceecchhHHHHHHHHHh
Q 027174 1 MCMGVTAGAYILTLFAMK 18 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~ 18 (227)
+++|||+||.+|..++..
T Consensus 254 VITGHSLGGGVAALLAil 271 (633)
T PLN02847 254 KIVGHSLGGGTAALLTYI 271 (633)
T ss_pred EEeccChHHHHHHHHHHH
Confidence 478999999999998875
No 180
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=91.24 E-value=0.17 Score=41.64 Aligned_cols=34 Identities=24% Similarity=0.259 Sum_probs=28.4
Q ss_pred CceecchhHHHHHHHHHhcCCccceEEEecCCCC
Q 027174 1 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 34 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~ 34 (227)
|.+|+|.||.+|...|.-.|..|++++=-++...
T Consensus 187 I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~ 220 (403)
T PF11144_consen 187 IYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYAL 220 (403)
T ss_pred EEEecCcHHHHHHHHHhhCccceeEEEecCcccc
Confidence 6789999999999999999999998765554443
No 181
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=91.12 E-value=0.24 Score=37.96 Aligned_cols=34 Identities=18% Similarity=0.152 Sum_probs=25.5
Q ss_pred ceecchhHHHHHHHHHh----cC-----CccceEEEecCCCCC
Q 027174 2 CMGVTAGAYILTLFAMK----YR-----HRVLGLILVSPLCKA 35 (227)
Q Consensus 2 lvGhS~Gg~ia~~~A~~----~P-----~~V~~lili~~~~~~ 35 (227)
+++||||+.+.++.... .+ .++..+|+++|-...
T Consensus 97 ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~ 139 (233)
T PF05990_consen 97 ILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDN 139 (233)
T ss_pred EEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCH
Confidence 78999999998887654 21 367888898876553
No 182
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=90.85 E-value=0.29 Score=41.24 Aligned_cols=34 Identities=24% Similarity=0.348 Sum_probs=27.7
Q ss_pred CceecchhHHHHHHHHHhcCCccceEEEecCCCC
Q 027174 1 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 34 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~ 34 (227)
|++|-|+||++|..+-.+||+.|.+.+..+++..
T Consensus 116 I~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 116 IVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQ 149 (434)
T ss_dssp EEEEETHHHHHHHHHHHH-TTT-SEEEEET--CC
T ss_pred EEECCcchhHHHHHHHhhCCCeeEEEEeccceee
Confidence 6899999999999999999999999988887664
No 183
>PLN02934 triacylglycerol lipase
Probab=90.82 E-value=0.13 Score=43.51 Aligned_cols=17 Identities=24% Similarity=0.442 Sum_probs=15.1
Q ss_pred CceecchhHHHHHHHHH
Q 027174 1 MCMGVTAGAYILTLFAM 17 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~ 17 (227)
++.|||+||++|..+|.
T Consensus 324 vVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 324 VVTGHSLGGALAILFPT 340 (515)
T ss_pred EEeccccHHHHHHHHHH
Confidence 47899999999999985
No 184
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=90.79 E-value=0.25 Score=40.03 Aligned_cols=40 Identities=18% Similarity=0.325 Sum_probs=29.4
Q ss_pred CceecchhHHHHHHHHHhcCC-----ccceEEEecCCCCCCchhHH
Q 027174 1 MCMGVTAGAYILTLFAMKYRH-----RVLGLILVSPLCKAPSWTEW 41 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~-----~V~~lili~~~~~~~~~~~~ 41 (227)
.+||||+|+.+.......-.+ .|+.+++++.+... ....|
T Consensus 223 tLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~-~~~~W 267 (345)
T PF05277_consen 223 TLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPS-DPEEW 267 (345)
T ss_pred EEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCC-CHHHH
Confidence 479999999998887765544 38999999865543 34444
No 185
>PLN02719 triacylglycerol lipase
Probab=90.75 E-value=0.19 Score=42.56 Aligned_cols=18 Identities=22% Similarity=0.263 Sum_probs=15.6
Q ss_pred CceecchhHHHHHHHHHh
Q 027174 1 MCMGVTAGAYILTLFAMK 18 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~ 18 (227)
++.|||+||++|...|..
T Consensus 301 tVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 301 TVTGHSLGGALAVLSAYD 318 (518)
T ss_pred EEecCcHHHHHHHHHHHH
Confidence 368999999999998864
No 186
>PLN03037 lipase class 3 family protein; Provisional
Probab=90.66 E-value=0.15 Score=43.23 Aligned_cols=18 Identities=22% Similarity=0.226 Sum_probs=15.5
Q ss_pred CceecchhHHHHHHHHHh
Q 027174 1 MCMGVTAGAYILTLFAMK 18 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~ 18 (227)
++.|||+||++|+..|..
T Consensus 321 tVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 321 TITGHSLGGALALLNAYE 338 (525)
T ss_pred EEeccCHHHHHHHHHHHH
Confidence 368999999999998864
No 187
>PLN02761 lipase class 3 family protein
Probab=90.23 E-value=0.17 Score=42.93 Aligned_cols=18 Identities=22% Similarity=0.239 Sum_probs=15.4
Q ss_pred CceecchhHHHHHHHHHh
Q 027174 1 MCMGVTAGAYILTLFAMK 18 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~ 18 (227)
++.|||+||++|...|..
T Consensus 297 tVTGHSLGGALAtLaA~D 314 (527)
T PLN02761 297 TVTGHSLGASLALVSAYD 314 (527)
T ss_pred EEeccchHHHHHHHHHHH
Confidence 368999999999998853
No 188
>PLN02753 triacylglycerol lipase
Probab=90.22 E-value=0.17 Score=42.94 Aligned_cols=18 Identities=22% Similarity=0.252 Sum_probs=15.6
Q ss_pred CceecchhHHHHHHHHHh
Q 027174 1 MCMGVTAGAYILTLFAMK 18 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~ 18 (227)
++.|||+||++|+..|..
T Consensus 315 tVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 315 TVTGHSLGGALAILSAYD 332 (531)
T ss_pred EEEccCHHHHHHHHHHHH
Confidence 368999999999999864
No 189
>PLN02802 triacylglycerol lipase
Probab=90.18 E-value=0.17 Score=42.78 Aligned_cols=19 Identities=26% Similarity=0.273 Sum_probs=16.0
Q ss_pred CceecchhHHHHHHHHHhc
Q 027174 1 MCMGVTAGAYILTLFAMKY 19 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~ 19 (227)
++.|||+||.+|...|...
T Consensus 333 ~VTGHSLGGALAtLaA~dL 351 (509)
T PLN02802 333 TVTGHSLGAALALLVADEL 351 (509)
T ss_pred EEeccchHHHHHHHHHHHH
Confidence 3679999999999988754
No 190
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=90.05 E-value=0.36 Score=38.71 Aligned_cols=34 Identities=15% Similarity=0.141 Sum_probs=30.0
Q ss_pred CceecchhHHHHHHHHHhcCC-ccceEEEecCCCC
Q 027174 1 MCMGVTAGAYILTLFAMKYRH-RVLGLILVSPLCK 34 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~-~V~~lili~~~~~ 34 (227)
|||||+.|+..+..|....+. .++++|++++...
T Consensus 196 vlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~~p 230 (310)
T PF12048_consen 196 VLIGHGTGAGWAARYLAEKPPPMPDALVLINAYWP 230 (310)
T ss_pred EEEEeChhHHHHHHHHhcCCCcccCeEEEEeCCCC
Confidence 689999999999999998875 5999999998754
No 191
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=89.72 E-value=0.16 Score=42.37 Aligned_cols=32 Identities=6% Similarity=0.120 Sum_probs=25.9
Q ss_pred CceecchhHHHHHHHHHhcCC--------ccceEEEecCC
Q 027174 1 MCMGVTAGAYILTLFAMKYRH--------RVLGLILVSPL 32 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~--------~V~~lili~~~ 32 (227)
+||+|||||.+.+.+...+++ .+++++-++++
T Consensus 185 vlisHSMG~l~~lyFl~w~~~~~~~W~~k~I~sfvnig~p 224 (473)
T KOG2369|consen 185 VLISHSMGGLYVLYFLKWVEAEGPAWCDKYIKSFVNIGAP 224 (473)
T ss_pred EEEecCCccHHHHHHHhcccccchhHHHHHHHHHHccCch
Confidence 589999999999999999887 36666666543
No 192
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=89.65 E-value=0.15 Score=43.98 Aligned_cols=34 Identities=6% Similarity=0.054 Sum_probs=25.8
Q ss_pred CceecchhHHHHHHHHHhc-----------C----CccceEEEecCCCC
Q 027174 1 MCMGVTAGAYILTLFAMKY-----------R----HRVLGLILVSPLCK 34 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~-----------P----~~V~~lili~~~~~ 34 (227)
+||||||||.+++.+...- + ..|++.|.++++..
T Consensus 216 VLV~HSMGglv~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~l 264 (642)
T PLN02517 216 VVVPHSMGVLYFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPFL 264 (642)
T ss_pred EEEEeCCchHHHHHHHHhccccccccCCcchHHHHHHHHHheecccccC
Confidence 5899999999999987632 1 24788888887543
No 193
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=88.88 E-value=0.36 Score=37.06 Aligned_cols=30 Identities=23% Similarity=0.271 Sum_probs=24.5
Q ss_pred ceecchhHHHHHHHHHhcCCccceEEEecC
Q 027174 2 CMGVTAGAYILTLFAMKYRHRVLGLILVSP 31 (227)
Q Consensus 2 lvGhS~Gg~ia~~~A~~~P~~V~~lili~~ 31 (227)
.||||||+.+-+.+...++..-++.|+++-
T Consensus 94 ~vGHSlGcklhlLi~s~~~~~r~gniliSF 123 (250)
T PF07082_consen 94 GVGHSLGCKLHLLIGSLFDVERAGNILISF 123 (250)
T ss_pred eeecccchHHHHHHhhhccCcccceEEEec
Confidence 589999999999999888766677777763
No 194
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=88.81 E-value=0.32 Score=35.66 Aligned_cols=34 Identities=15% Similarity=0.213 Sum_probs=27.5
Q ss_pred CceecchhHHHHHHHHHh------cCCccceEEEecCCCC
Q 027174 1 MCMGVTAGAYILTLFAMK------YRHRVLGLILVSPLCK 34 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~------~P~~V~~lili~~~~~ 34 (227)
+++|+|.||.++..++.. ..++|.++++++-+..
T Consensus 84 vl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~ 123 (179)
T PF01083_consen 84 VLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRR 123 (179)
T ss_dssp EEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTT
T ss_pred EEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCcc
Confidence 578999999999999877 3468999999886554
No 195
>KOG3101 consensus Esterase D [General function prediction only]
Probab=88.81 E-value=0.033 Score=41.48 Aligned_cols=30 Identities=13% Similarity=0.139 Sum_probs=25.3
Q ss_pred ceecchhHHHHHHHHHhcCCccceEEEecC
Q 027174 2 CMGVTAGAYILTLFAMKYRHRVLGLILVSP 31 (227)
Q Consensus 2 lvGhS~Gg~ia~~~A~~~P~~V~~lili~~ 31 (227)
+.||||||.=|+..+.+.|.+.+++-..+|
T Consensus 145 IfGHSMGGhGAl~~~Lkn~~kykSvSAFAP 174 (283)
T KOG3101|consen 145 IFGHSMGGHGALTIYLKNPSKYKSVSAFAP 174 (283)
T ss_pred eeccccCCCceEEEEEcCcccccceecccc
Confidence 579999999999999999998877665544
No 196
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=87.94 E-value=0.57 Score=34.54 Aligned_cols=30 Identities=30% Similarity=0.407 Sum_probs=22.4
Q ss_pred ceecchhHHHHHHHHHhcCCccceEEEecCC
Q 027174 2 CMGVTAGAYILTLFAMKYRHRVLGLILVSPL 32 (227)
Q Consensus 2 lvGhS~Gg~ia~~~A~~~P~~V~~lili~~~ 32 (227)
+.|+|+|++|++++|.+.|+.- ..+.+.+.
T Consensus 107 l~GfSFGa~Ia~~la~r~~e~~-~~is~~p~ 136 (210)
T COG2945 107 LAGFSFGAYIAMQLAMRRPEIL-VFISILPP 136 (210)
T ss_pred hcccchHHHHHHHHHHhccccc-ceeeccCC
Confidence 5799999999999999998743 33333333
No 197
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=86.93 E-value=0.53 Score=35.15 Aligned_cols=48 Identities=8% Similarity=0.126 Sum_probs=39.7
Q ss_pred cCcccccEEEEecCCCccc--chHHHHHhhhcCCCcEEEEecCCCCCCCccC
Q 027174 117 LRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQ 166 (227)
Q Consensus 117 l~~i~~Pvlii~G~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~ 166 (227)
+..+++|++++.|++|.-. +..+.+++.+ ..+++..++|.+|+-.+|+
T Consensus 203 ~~~v~~~ilVv~~~~espklieQnrdf~~q~--~~a~~~~f~n~~hy~I~~~ 252 (270)
T KOG4627|consen 203 YTDVTVWILVVAAEHESPKLIEQNRDFADQL--RKASFTLFKNYDHYDIIEE 252 (270)
T ss_pred hcCceeeeeEeeecccCcHHHHhhhhHHHHh--hhcceeecCCcchhhHHHH
Confidence 4667899999999998753 7777788888 6789999999999876654
No 198
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=86.92 E-value=0.26 Score=40.61 Aligned_cols=31 Identities=32% Similarity=0.597 Sum_probs=26.9
Q ss_pred CceecchhHHHHHHHHHhcCCccceEEEecC
Q 027174 1 MCMGVTAGAYILTLFAMKYRHRVLGLILVSP 31 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~~V~~lili~~ 31 (227)
|++|-|+||++|..+=.+||+.|.|....++
T Consensus 170 IafGGSYGGMLaAWfRlKYPHiv~GAlAaSA 200 (492)
T KOG2183|consen 170 IAFGGSYGGMLAAWFRLKYPHIVLGALAASA 200 (492)
T ss_pred EEecCchhhHHHHHHHhcChhhhhhhhhccC
Confidence 6799999999999999999999988665543
No 199
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=85.70 E-value=5.5 Score=34.64 Aligned_cols=32 Identities=9% Similarity=0.034 Sum_probs=28.8
Q ss_pred eecchhHHHHHHHHHhcCCccceEEEecCCCC
Q 027174 3 MGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 34 (227)
Q Consensus 3 vGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~ 34 (227)
+|-|++|...+.+|+..|.-++.++...+...
T Consensus 129 ~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D 160 (563)
T COG2936 129 LGLSYLGFTQLAAAALQPPALKAIAPTEGLVD 160 (563)
T ss_pred ecccHHHHHHHHHHhcCCchheeecccccccc
Confidence 69999999999999999999999998877654
No 200
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=85.51 E-value=1 Score=40.76 Aligned_cols=18 Identities=22% Similarity=0.253 Sum_probs=16.1
Q ss_pred ceecchhHHHHHHHHHhc
Q 027174 2 CMGVTAGAYILTLFAMKY 19 (227)
Q Consensus 2 lvGhS~Gg~ia~~~A~~~ 19 (227)
++||||||.++..++...
T Consensus 559 ~lGHSLGgiig~~~~~~a 576 (792)
T TIGR03502 559 FLGHSLGGIVGTSFIAYA 576 (792)
T ss_pred EEecCHHHHHHHHHHHhc
Confidence 689999999999999763
No 201
>PLN02633 palmitoyl protein thioesterase family protein
Probab=85.31 E-value=1.1 Score=35.65 Aligned_cols=32 Identities=13% Similarity=0.067 Sum_probs=28.8
Q ss_pred ceecchhHHHHHHHHHhcCC--ccceEEEecCCC
Q 027174 2 CMGVTAGAYILTLFAMKYRH--RVLGLILVSPLC 33 (227)
Q Consensus 2 lvGhS~Gg~ia~~~A~~~P~--~V~~lili~~~~ 33 (227)
+||+|-||.++..++.++|+ .|..+|.+++.-
T Consensus 98 aIGfSQGGlflRa~ierc~~~p~V~nlISlggph 131 (314)
T PLN02633 98 IVGRSQGNLVARGLIEFCDGGPPVYNYISLAGPH 131 (314)
T ss_pred EEEEccchHHHHHHHHHCCCCCCcceEEEecCCC
Confidence 68999999999999999998 599999998653
No 202
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=84.99 E-value=1.2 Score=36.89 Aligned_cols=57 Identities=14% Similarity=0.119 Sum_probs=38.0
Q ss_pred cccEEEEecCCCcccchHHHHHhhhcCCCcEEEEecCCCCCCCccC-----hHHHHHHHHHHHh
Q 027174 121 QCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQ-----PHAMLIPMEYFLM 179 (227)
Q Consensus 121 ~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~-----p~~~~~~i~~fl~ 179 (227)
.-.+++|+|++|++......+-+.- .++.+.+.||++|...+.. -++....|.+|..
T Consensus 351 ~~rmlFVYG~nDPW~A~~f~l~~g~--~ds~v~~~PggnHga~I~~L~~~~r~~a~a~l~~WaG 412 (448)
T PF05576_consen 351 GPRMLFVYGENDPWSAEPFRLGKGK--RDSYVFTAPGGNHGARIAGLPEAERAEATARLRRWAG 412 (448)
T ss_pred CCeEEEEeCCCCCcccCccccCCCC--cceEEEEcCCCcccccccCCCHHHHHHHHHHHHHHcC
Confidence 3479999999999985444333323 5788889999999766532 2344455555553
No 203
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=84.59 E-value=0.6 Score=37.93 Aligned_cols=17 Identities=24% Similarity=0.387 Sum_probs=14.9
Q ss_pred ceecchhHHHHHHHHHh
Q 027174 2 CMGVTAGAYILTLFAMK 18 (227)
Q Consensus 2 lvGhS~Gg~ia~~~A~~ 18 (227)
+-|||+||++|...|..
T Consensus 175 vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 175 VTGHSLGGALASLAALD 191 (336)
T ss_pred EecCChHHHHHHHHHHH
Confidence 57999999999988874
No 204
>PLN02606 palmitoyl-protein thioesterase
Probab=83.91 E-value=1.5 Score=34.93 Aligned_cols=32 Identities=6% Similarity=0.044 Sum_probs=28.7
Q ss_pred ceecchhHHHHHHHHHhcCC--ccceEEEecCCC
Q 027174 2 CMGVTAGAYILTLFAMKYRH--RVLGLILVSPLC 33 (227)
Q Consensus 2 lvGhS~Gg~ia~~~A~~~P~--~V~~lili~~~~ 33 (227)
+||+|-||.++..++.++|+ .|..+|.+++.-
T Consensus 99 aIGfSQGglflRa~ierc~~~p~V~nlISlggph 132 (306)
T PLN02606 99 IVAESQGNLVARGLIEFCDNAPPVINYVSLGGPH 132 (306)
T ss_pred EEEEcchhHHHHHHHHHCCCCCCcceEEEecCCc
Confidence 68999999999999999988 499999998654
No 205
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=83.17 E-value=19 Score=28.72 Aligned_cols=61 Identities=13% Similarity=0.119 Sum_probs=44.0
Q ss_pred cccEEEEecCCCccc-----chHHHHHhhhcCCCc--EEEEecCCCCCCCccC---hHHHHHHHHHHHhhCCc
Q 027174 121 QCRSLIFVGESSPFH-----SEAVHMTSKIDRRYS--ALVEVQACGSMVTEEQ---PHAMLIPMEYFLMGYGL 183 (227)
Q Consensus 121 ~~Pvlii~G~~D~~~-----~~~~~~~~~~~~~~~--~~~~i~~~gH~~~~e~---p~~~~~~i~~fl~~~~~ 183 (227)
+|-.+-+-|+.|.+. +.+..+...+ |.. +...-+++||+-...- .+++...|.+|+.+...
T Consensus 339 ~~aL~tvEGEnDDIsgvGQTkAA~~LC~nI--pe~mk~hy~qp~vGHYGVFnGsrfr~eIvPri~dFI~~~d~ 409 (415)
T COG4553 339 NVALFTVEGENDDISGVGQTKAAHDLCSNI--PEDMKQHYMQPDVGHYGVFNGSRFREEIVPRIRDFIRRYDR 409 (415)
T ss_pred ceeEEEeecccccccccchhHHHHHHHhcC--hHHHHHHhcCCCCCccceeccchHHHHHHHHHHHHHHHhCc
Confidence 467788899999985 4555566666 433 4566789999766543 46788899999988643
No 206
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=83.03 E-value=0.74 Score=39.28 Aligned_cols=61 Identities=11% Similarity=0.244 Sum_probs=42.0
Q ss_pred cccEEEEecCCCcccc--hHHH----HHhhhcC------CCcEEEEecCCCCCCCcc--ChHHHHHHHHHHHhhC
Q 027174 121 QCRSLIFVGESSPFHS--EAVH----MTSKIDR------RYSALVEVQACGSMVTEE--QPHAMLIPMEYFLMGY 181 (227)
Q Consensus 121 ~~Pvlii~G~~D~~~~--~~~~----~~~~~~~------~~~~~~~i~~~gH~~~~e--~p~~~~~~i~~fl~~~ 181 (227)
.-++++.||..|++++ .... +.+.+.. .-.++..+||.+|..--. .+-.....|.+|+++-
T Consensus 353 GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~G 427 (474)
T PF07519_consen 353 GGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVENG 427 (474)
T ss_pred CCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhCC
Confidence 4589999999999872 2222 3333321 235789999999976543 4556778999999863
No 207
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=82.99 E-value=0.5 Score=34.16 Aligned_cols=34 Identities=24% Similarity=0.375 Sum_probs=30.0
Q ss_pred CceecchhHHHHHHHHHhcCCccceEEEecCCCC
Q 027174 1 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 34 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~ 34 (227)
|+-|-||||..|..+..++|+.+.++|.++....
T Consensus 104 ~~sgcsmGayhA~nfvfrhP~lftkvialSGvYd 137 (227)
T COG4947 104 IVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYD 137 (227)
T ss_pred cccccchhhhhhhhhheeChhHhhhheeecceee
Confidence 3458899999999999999999999999887654
No 208
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=81.57 E-value=26 Score=31.13 Aligned_cols=33 Identities=21% Similarity=0.336 Sum_probs=28.9
Q ss_pred ceecchhHHHHHHHHHhcCCccceEEEecCCCC
Q 027174 2 CMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 34 (227)
Q Consensus 2 lvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~ 34 (227)
++|-|.||++.-..+...|+.+.++|.--|...
T Consensus 531 a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVD 563 (682)
T COG1770 531 AIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVD 563 (682)
T ss_pred EeccCchhHHHHHHHhhChhhhhheeecCCccc
Confidence 679999999999999999999999888666543
No 209
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=81.51 E-value=0.98 Score=33.86 Aligned_cols=19 Identities=16% Similarity=0.176 Sum_probs=17.5
Q ss_pred CceecchhHHHHHHHHHhc
Q 027174 1 MCMGVTAGAYILTLFAMKY 19 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~ 19 (227)
||+|||-|+.+..++..++
T Consensus 98 ILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 98 ILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred EEEEeChHHHHHHHHHHHH
Confidence 7999999999999998875
No 210
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=81.20 E-value=1.6 Score=34.45 Aligned_cols=32 Identities=19% Similarity=0.293 Sum_probs=29.5
Q ss_pred ceecchhHHHHHHHHHhcCCccceEEEecCCC
Q 027174 2 CMGVTAGAYILTLFAMKYRHRVLGLILVSPLC 33 (227)
Q Consensus 2 lvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~ 33 (227)
+.|.|-||..+..++..+|+.+.++.++....
T Consensus 148 vtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 148 VTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred EEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 67999999999999999999999999988765
No 211
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=79.81 E-value=2.1 Score=32.25 Aligned_cols=33 Identities=9% Similarity=0.180 Sum_probs=28.0
Q ss_pred ceecchhHHHHHHHHHhcCC--ccceEEEecCCCC
Q 027174 2 CMGVTAGAYILTLFAMKYRH--RVLGLILVSPLCK 34 (227)
Q Consensus 2 lvGhS~Gg~ia~~~A~~~P~--~V~~lili~~~~~ 34 (227)
++.||.||...+.+..++|+ +|.++.+.|+...
T Consensus 194 vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~~ 228 (297)
T KOG3967|consen 194 VVAHSYGGSLTLDLVERFPDDESVFAIALTDSAMG 228 (297)
T ss_pred EEEeccCChhHHHHHHhcCCccceEEEEeeccccc
Confidence 68999999999999999996 6778888877643
No 212
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=79.54 E-value=7.6 Score=27.94 Aligned_cols=29 Identities=7% Similarity=0.096 Sum_probs=22.2
Q ss_pred ceecchhHHHHHHHHHhcCCccceEEEecCC
Q 027174 2 CMGVTAGAYILTLFAMKYRHRVLGLILVSPL 32 (227)
Q Consensus 2 lvGhS~Gg~ia~~~A~~~P~~V~~lili~~~ 32 (227)
+|++|||=.+|-++...++ +++.+.+++.
T Consensus 61 lvAwSMGVwvAeR~lqg~~--lksatAiNGT 89 (214)
T COG2830 61 LVAWSMGVWVAERVLQGIR--LKSATAINGT 89 (214)
T ss_pred hhhhhHHHHHHHHHHhhcc--ccceeeecCC
Confidence 6899999999999887764 5566666644
No 213
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=78.72 E-value=1.7 Score=32.45 Aligned_cols=55 Identities=9% Similarity=0.215 Sum_probs=36.6
Q ss_pred cccEEEEecCCCcccc-----hHHHHHhhhcCCCcEEEEecCCCCCCCccChHHHHHHHHHHHhh
Q 027174 121 QCRSLIFVGESSPFHS-----EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 180 (227)
Q Consensus 121 ~~Pvlii~G~~D~~~~-----~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 180 (227)
..|++..+|+.|++++ .+..+..... ...++..+++-+|... |+++ +.+..|++.
T Consensus 144 ~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~-~~~~f~~y~g~~h~~~---~~e~-~~~~~~~~~ 203 (206)
T KOG2112|consen 144 YTPILLCHGTADPLVPFRFGEKSAQFLKSLG-VRVTFKPYPGLGHSTS---PQEL-DDLKSWIKT 203 (206)
T ss_pred cchhheecccCCceeehHHHHHHHHHHHHcC-CceeeeecCCcccccc---HHHH-HHHHHHHHH
Confidence 5589999999999983 2222333333 3378999999999876 5555 345666654
No 214
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=78.72 E-value=2.8 Score=33.03 Aligned_cols=32 Identities=19% Similarity=0.342 Sum_probs=25.8
Q ss_pred ceecchhHHHHHHHHHhcCC-ccceEEEecCCC
Q 027174 2 CMGVTAGAYILTLFAMKYRH-RVLGLILVSPLC 33 (227)
Q Consensus 2 lvGhS~Gg~ia~~~A~~~P~-~V~~lili~~~~ 33 (227)
+||+|=||.++..++.++|+ .|..+|.+++.-
T Consensus 84 ~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph 116 (279)
T PF02089_consen 84 AIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPH 116 (279)
T ss_dssp EEEETCHHHHHHHHHHH-TSS-EEEEEEES--T
T ss_pred eeeeccccHHHHHHHHHCCCCCceeEEEecCcc
Confidence 68999999999999999986 699999998543
No 215
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=77.40 E-value=1.4 Score=35.55 Aligned_cols=19 Identities=16% Similarity=0.067 Sum_probs=15.4
Q ss_pred CceecchhHHHHHHHHHhc
Q 027174 1 MCMGVTAGAYILTLFAMKY 19 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~ 19 (227)
|+-|||+||.|+.+.+.++
T Consensus 218 i~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 218 ILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred EEeeccccHHHHHHHHHhc
Confidence 4679999999999866555
No 216
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=77.37 E-value=0.7 Score=34.52 Aligned_cols=33 Identities=30% Similarity=0.416 Sum_probs=26.5
Q ss_pred ceecchhHHHHHHHHHh-cCCccceEEEecCCCC
Q 027174 2 CMGVTAGAYILTLFAMK-YRHRVLGLILVSPLCK 34 (227)
Q Consensus 2 lvGhS~Gg~ia~~~A~~-~P~~V~~lili~~~~~ 34 (227)
+-|||.|+.+|.+...+ +..+|.++++.++...
T Consensus 140 ~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~ 173 (270)
T KOG4627|consen 140 FGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYD 173 (270)
T ss_pred EcccchHHHHHHHHHHHhcCchHHHHHHHhhHhh
Confidence 45999999999887765 5668999999886654
No 217
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=76.26 E-value=2.3 Score=36.26 Aligned_cols=34 Identities=18% Similarity=0.194 Sum_probs=26.3
Q ss_pred CceecchhHHHHHHHHHhc----------CCccceEEEecCCCC
Q 027174 1 MCMGVTAGAYILTLFAMKY----------RHRVLGLILVSPLCK 34 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~----------P~~V~~lili~~~~~ 34 (227)
+++||||||..+..+|... +-.++|+++.++...
T Consensus 174 ~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~d 217 (462)
T PTZ00472 174 FVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLTD 217 (462)
T ss_pred EEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEeccccC
Confidence 3789999999998888763 124789999887654
No 218
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=75.03 E-value=2 Score=35.00 Aligned_cols=56 Identities=18% Similarity=0.124 Sum_probs=42.0
Q ss_pred cccCcccccEEEEecCCCccc---chHHHHHhhhcCCCcEEEEecCCCCCCCccChHHH
Q 027174 115 EGLRKLQCRSLIFVGESSPFH---SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAM 170 (227)
Q Consensus 115 ~~l~~i~~Pvlii~G~~D~~~---~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~ 170 (227)
..+.+++.|++++.|..|.+. .........+.++.--+..++++.|+-++|-.+++
T Consensus 245 tgl~~v~~P~~~~a~s~D~~aP~~~~~~~~f~~l~g~~k~~~~vp~a~h~sfl~~~~~~ 303 (365)
T COG4188 245 TGLVKVTDPVLLAAGSADGFAPPVTEQIRPFGYLPGALKYLRLVPGATHFSFLELCKEG 303 (365)
T ss_pred ccceeeecceeeecccccccCCcccccccccccCCcchhheeecCCCccccccccCccc
Confidence 347789999999999999865 33344556663222368899999999999987775
No 219
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=72.82 E-value=6.4 Score=29.44 Aligned_cols=17 Identities=24% Similarity=0.317 Sum_probs=11.8
Q ss_pred hHHHHHHHHHHHhhCCc
Q 027174 167 PHAMLIPMEYFLMGYGL 183 (227)
Q Consensus 167 p~~~~~~i~~fl~~~~~ 183 (227)
|-.+.+.-.+|+...+.
T Consensus 159 p~~~g~~s~~~l~~~~~ 175 (206)
T KOG2112|consen 159 PFRFGEKSAQFLKSLGV 175 (206)
T ss_pred ehHHHHHHHHHHHHcCC
Confidence 66677777777776643
No 220
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=70.90 E-value=2.1 Score=33.67 Aligned_cols=19 Identities=21% Similarity=0.489 Sum_probs=16.4
Q ss_pred ceecchhHHHHHHHHHhcC
Q 027174 2 CMGVTAGAYILTLFAMKYR 20 (227)
Q Consensus 2 lvGhS~Gg~ia~~~A~~~P 20 (227)
+-|||+||.+|..+..++.
T Consensus 280 lTGHSLGGa~AsLlG~~fg 298 (425)
T COG5153 280 LTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred EeccccchHHHHHhccccC
Confidence 5699999999999888773
No 221
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=70.90 E-value=2.1 Score=33.67 Aligned_cols=19 Identities=21% Similarity=0.489 Sum_probs=16.4
Q ss_pred ceecchhHHHHHHHHHhcC
Q 027174 2 CMGVTAGAYILTLFAMKYR 20 (227)
Q Consensus 2 lvGhS~Gg~ia~~~A~~~P 20 (227)
+-|||+||.+|..+..++.
T Consensus 280 lTGHSLGGa~AsLlG~~fg 298 (425)
T KOG4540|consen 280 LTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred EeccccchHHHHHhccccC
Confidence 5699999999999888773
No 222
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=70.39 E-value=3.1 Score=33.87 Aligned_cols=17 Identities=12% Similarity=0.229 Sum_probs=14.5
Q ss_pred ceecchhHHHHHHHHHh
Q 027174 2 CMGVTAGAYILTLFAMK 18 (227)
Q Consensus 2 lvGhS~Gg~ia~~~A~~ 18 (227)
+++||||.++.++...+
T Consensus 195 ilAHSMGtwl~~e~LrQ 211 (377)
T COG4782 195 LLAHSMGTWLLMEALRQ 211 (377)
T ss_pred EEEecchHHHHHHHHHH
Confidence 78999999999887654
No 223
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=65.94 E-value=77 Score=30.99 Aligned_cols=33 Identities=21% Similarity=0.177 Sum_probs=26.5
Q ss_pred ceecchhHHHHHHHHHhcC--CccceEEEecCCCC
Q 027174 2 CMGVTAGAYILTLFAMKYR--HRVLGLILVSPLCK 34 (227)
Q Consensus 2 lvGhS~Gg~ia~~~A~~~P--~~V~~lili~~~~~ 34 (227)
++|+|+|+.++.++|..-- +....+|++|..+.
T Consensus 2186 l~GYSyG~~l~f~ma~~Lqe~~~~~~lillDGspt 2220 (2376)
T KOG1202|consen 2186 LAGYSYGACLAFEMASQLQEQQSPAPLILLDGSPT 2220 (2376)
T ss_pred eeccchhHHHHHHHHHHHHhhcCCCcEEEecCchH
Confidence 6899999999999997543 44667999997764
No 224
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=64.11 E-value=80 Score=28.09 Aligned_cols=34 Identities=15% Similarity=0.151 Sum_probs=25.9
Q ss_pred CceecchhHHHHHHHHHhcC-CccceEEEecCCCC
Q 027174 1 MCMGVTAGAYILTLFAMKYR-HRVLGLILVSPLCK 34 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P-~~V~~lili~~~~~ 34 (227)
|.-+.|-||.-++..|.+-- ..|++++...|...
T Consensus 288 IAssvSNGGgAal~AAEqD~~glIdgVvv~EP~v~ 322 (690)
T PF10605_consen 288 IASSVSNGGGAALAAAEQDTQGLIDGVVVSEPNVN 322 (690)
T ss_pred EEEeecCccHHHHhHhhcccCCceeeEEecCCccC
Confidence 44578899999998887643 47999998887653
No 225
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=61.79 E-value=5.3 Score=30.46 Aligned_cols=19 Identities=16% Similarity=0.321 Sum_probs=16.5
Q ss_pred CceecchhHHHHHHHHHhc
Q 027174 1 MCMGVTAGAYILTLFAMKY 19 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~ 19 (227)
+++|+|.|+.++..++.+.
T Consensus 51 vV~GySQGA~Va~~~~~~l 69 (225)
T PF08237_consen 51 VVFGYSQGAVVASNVLRRL 69 (225)
T ss_pred EEEEECHHHHHHHHHHHHH
Confidence 5799999999999988764
No 226
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=60.74 E-value=8.4 Score=33.66 Aligned_cols=39 Identities=15% Similarity=0.384 Sum_probs=26.2
Q ss_pred eecchhHHHHHHHHHhc-----CC------ccceEEEecCCCCCCchhHH
Q 027174 3 MGVTAGAYILTLFAMKY-----RH------RVLGLILVSPLCKAPSWTEW 41 (227)
Q Consensus 3 vGhS~Gg~ia~~~A~~~-----P~------~V~~lili~~~~~~~~~~~~ 41 (227)
|||||||..+-.+.... |+ ...|+|+++.+........|
T Consensus 531 I~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PHrGS~lA~~ 580 (697)
T KOG2029|consen 531 IGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPHRGSRLAGW 580 (697)
T ss_pred EecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCCCCCccccc
Confidence 79999999987776542 32 36678887766554444444
No 227
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=60.61 E-value=3.9 Score=33.41 Aligned_cols=20 Identities=20% Similarity=0.207 Sum_probs=17.4
Q ss_pred ceecchhHHHHHHHHHhcCC
Q 027174 2 CMGVTAGAYILTLFAMKYRH 21 (227)
Q Consensus 2 lvGhS~Gg~ia~~~A~~~P~ 21 (227)
++|||+||..+++.+....+
T Consensus 163 v~GhS~GG~T~m~laGA~~~ 182 (365)
T COG4188 163 VLGHSFGGYTAMELAGAELD 182 (365)
T ss_pred EEecccccHHHHHhcccccc
Confidence 58999999999999977655
No 228
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=60.03 E-value=44 Score=28.75 Aligned_cols=32 Identities=19% Similarity=0.289 Sum_probs=29.3
Q ss_pred eecchhHHHHHHHHHhcCCccceEEEecCCCC
Q 027174 3 MGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 34 (227)
Q Consensus 3 vGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~ 34 (227)
.|-|-||..++..|++||+.++|++.-+|...
T Consensus 120 ~GcS~GGRqgl~~AQryP~dfDGIlAgaPA~~ 151 (474)
T PF07519_consen 120 SGCSTGGRQGLMAAQRYPEDFDGILAGAPAIN 151 (474)
T ss_pred EEeCCCcchHHHHHHhChhhcCeEEeCCchHH
Confidence 58999999999999999999999998887654
No 229
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=59.86 E-value=3.1 Score=35.61 Aligned_cols=34 Identities=18% Similarity=0.131 Sum_probs=26.4
Q ss_pred CceecchhHHHHHHHHHh--cCCccceEEEecCCCC
Q 027174 1 MCMGVTAGAYILTLFAMK--YRHRVLGLILVSPLCK 34 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~--~P~~V~~lili~~~~~ 34 (227)
+++|||.||..+..++.. .+..+.++|+.++...
T Consensus 179 ~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 179 TIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred EEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 378999999999888776 3457888888876543
No 230
>COG3150 Predicted esterase [General function prediction only]
Probab=55.84 E-value=9.2 Score=27.76 Aligned_cols=31 Identities=16% Similarity=0.409 Sum_probs=24.2
Q ss_pred ceecchhHHHHHHHHHhcCCccceEEEecCCCCC
Q 027174 2 CMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 35 (227)
Q Consensus 2 lvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~~ 35 (227)
+||-|+||..|..++.++. + .-|++||...+
T Consensus 63 ivGssLGGY~At~l~~~~G--i-rav~~NPav~P 93 (191)
T COG3150 63 IVGSSLGGYYATWLGFLCG--I-RAVVFNPAVRP 93 (191)
T ss_pred EEeecchHHHHHHHHHHhC--C-hhhhcCCCcCc
Confidence 7899999999999999984 3 33567776553
No 231
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=55.15 E-value=7.5 Score=31.27 Aligned_cols=19 Identities=11% Similarity=0.137 Sum_probs=16.1
Q ss_pred CceecchhHHHHHHHHHhc
Q 027174 1 MCMGVTAGAYILTLFAMKY 19 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~ 19 (227)
++.|-|+||.||..+|..+
T Consensus 35 ~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 35 WIAGTSTGGILALALLHGK 53 (312)
T ss_pred EEEeeChHHHHHHHHHcCC
Confidence 3689999999999999643
No 232
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=54.14 E-value=31 Score=27.14 Aligned_cols=33 Identities=12% Similarity=0.120 Sum_probs=27.7
Q ss_pred CceecchhHHHHHHHHHhcCC-ccceEEEecCCC
Q 027174 1 MCMGVTAGAYILTLFAMKYRH-RVLGLILVSPLC 33 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~-~V~~lili~~~~ 33 (227)
.++|.|-||.++..++...++ -|..+|.++++-
T Consensus 95 nivg~SQGglv~Raliq~cd~ppV~n~ISL~gPh 128 (296)
T KOG2541|consen 95 NIVGYSQGGLVARALIQFCDNPPVKNFISLGGPH 128 (296)
T ss_pred EEEEEccccHHHHHHHHhCCCCCcceeEeccCCc
Confidence 378999999999999998876 588999887543
No 233
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=53.92 E-value=13 Score=30.76 Aligned_cols=55 Identities=7% Similarity=0.103 Sum_probs=34.9
Q ss_pred ccEEEEecCCCcccchHHHHHhhhc--CCC-----cEEEEecCCCCCCCccChHHHHHHHHHHHh
Q 027174 122 CRSLIFVGESSPFHSEAVHMTSKID--RRY-----SALVEVQACGSMVTEEQPHAMLIPMEYFLM 179 (227)
Q Consensus 122 ~Pvlii~G~~D~~~~~~~~~~~~~~--~~~-----~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 179 (227)
+-+++++|+++-+.++..++.+.+. +++ ..+.+-+++.|.-+ .-....-+..|.+
T Consensus 303 ~~vfVi~Ge~EvfrddI~~~~~~~~~~~~~~~~~~~nv~~~~~G~Hi~P---~~~~~~~~~~W~~ 364 (374)
T PF10340_consen 303 YSVFVIYGEDEVFRDDILEWAKKLNDVKPNKFSNSNNVYIDEGGIHIGP---ILNYSRDLDKWSK 364 (374)
T ss_pred CcEEEEECCccccHHHHHHHHHHHhhcCccccCCcceEEEecCCccccc---hhhhhcCHHHHhc
Confidence 5799999999987777777776663 122 35566677788654 2223444555544
No 234
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=50.78 E-value=11 Score=27.71 Aligned_cols=18 Identities=33% Similarity=0.469 Sum_probs=15.9
Q ss_pred CceecchhHHHHHHHHHh
Q 027174 1 MCMGVTAGAYILTLFAMK 18 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~ 18 (227)
+++|-|.||.+|..+|..
T Consensus 30 ~i~GtSaGai~aa~~a~g 47 (194)
T cd07207 30 RVAGTSAGAITAALLALG 47 (194)
T ss_pred eEEEECHHHHHHHHHHcC
Confidence 478999999999999974
No 235
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=47.33 E-value=31 Score=29.59 Aligned_cols=33 Identities=24% Similarity=0.561 Sum_probs=26.4
Q ss_pred EEEEecCCCCCCCccChHHHHHHHHHHHhhCCc
Q 027174 151 ALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGL 183 (227)
Q Consensus 151 ~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~~ 183 (227)
.+..+-++|||++.++|+...+.+..|+...+.
T Consensus 461 ~~~r~y~aGHMvp~d~P~~~~~~~~~~~~~~~~ 493 (498)
T COG2939 461 TFLRIYEAGHMVPYDRPESSLEMVNLWINGYGA 493 (498)
T ss_pred eEEEEecCcceeecCChHHHHHHHHHHHhhccc
Confidence 444444699999999999999999999876543
No 236
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=46.97 E-value=24 Score=30.38 Aligned_cols=34 Identities=24% Similarity=0.197 Sum_probs=25.1
Q ss_pred CceecchhHHHHHHHHHhc--CCccceEEEecCCCC
Q 027174 1 MCMGVTAGAYILTLFAMKY--RHRVLGLILVSPLCK 34 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~--P~~V~~lili~~~~~ 34 (227)
+|+|||.||..+...+..- ...+.++|+.++...
T Consensus 211 Tl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~~ 246 (535)
T PF00135_consen 211 TLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSAL 246 (535)
T ss_dssp EEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--TT
T ss_pred eeeeecccccccceeeeccccccccccccccccccc
Confidence 3789999999887777652 358999999987543
No 237
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=46.88 E-value=13 Score=29.93 Aligned_cols=20 Identities=35% Similarity=0.527 Sum_probs=17.3
Q ss_pred CceecchhHHHHHHHHHhcC
Q 027174 1 MCMGVTAGAYILTLFAMKYR 20 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P 20 (227)
.++|-|+|+.++..||..++
T Consensus 46 ~v~GtSaGAi~ga~ya~g~~ 65 (306)
T cd07225 46 MVGGTSIGAFIGALYAEERN 65 (306)
T ss_pred EEEEECHHHHHHHHHHcCCC
Confidence 36899999999999998754
No 238
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=44.51 E-value=14 Score=26.57 Aligned_cols=19 Identities=32% Similarity=0.459 Sum_probs=16.5
Q ss_pred CceecchhHHHHHHHHHhc
Q 027174 1 MCMGVTAGAYILTLFAMKY 19 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~ 19 (227)
++.|-|+|+.+|..+|...
T Consensus 29 ~v~GtSaGAi~aa~~a~g~ 47 (172)
T cd07198 29 IIAGTSAGAIVAALLASGR 47 (172)
T ss_pred EEEEECHHHHHHHHHHcCC
Confidence 3689999999999999865
No 239
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=43.75 E-value=15 Score=27.71 Aligned_cols=21 Identities=24% Similarity=0.137 Sum_probs=18.2
Q ss_pred CceecchhHHHHHHHHHhcCC
Q 027174 1 MCMGVTAGAYILTLFAMKYRH 21 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~ 21 (227)
+++|.|.|+.+|..+|...+.
T Consensus 29 ~i~GtS~GAl~aa~~a~~~~~ 49 (215)
T cd07209 29 IISGTSIGAINGALIAGGDPE 49 (215)
T ss_pred EEEEECHHHHHHHHHHcCCcH
Confidence 478999999999999998753
No 240
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=42.84 E-value=17 Score=28.35 Aligned_cols=22 Identities=32% Similarity=0.462 Sum_probs=18.7
Q ss_pred CceecchhHHHHHHHHHhcCCc
Q 027174 1 MCMGVTAGAYILTLFAMKYRHR 22 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~~ 22 (227)
+++|-|.|+.+|..+++..+.+
T Consensus 30 ~i~GtSaGAi~a~~~~~g~~~~ 51 (266)
T cd07208 30 LVIGVSAGALNAASYLSGQRGR 51 (266)
T ss_pred EEEEECHHHHhHHHHHhCCcch
Confidence 3789999999999999887654
No 241
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=42.69 E-value=5 Score=35.08 Aligned_cols=31 Identities=13% Similarity=0.199 Sum_probs=24.8
Q ss_pred CceecchhHHHHHHHHHhcCC-ccceEEEecC
Q 027174 1 MCMGVTAGAYILTLFAMKYRH-RVLGLILVSP 31 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~-~V~~lili~~ 31 (227)
||+|.|||+.++.+.+....+ .|+++|.++=
T Consensus 253 iLvGrsmGAlVachVSpsnsdv~V~~vVCigy 284 (784)
T KOG3253|consen 253 ILVGRSMGALVACHVSPSNSDVEVDAVVCIGY 284 (784)
T ss_pred EEEecccCceeeEEeccccCCceEEEEEEecc
Confidence 789999999999888876543 4888888773
No 242
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=42.09 E-value=17 Score=28.66 Aligned_cols=19 Identities=21% Similarity=0.373 Sum_probs=16.8
Q ss_pred CceecchhHHHHHHHHHhc
Q 027174 1 MCMGVTAGAYILTLFAMKY 19 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~ 19 (227)
++.|-|+|+.++..||..+
T Consensus 41 ~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 41 AIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred EEEEECHHHHHHHHHHcCC
Confidence 3789999999999999875
No 243
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=40.13 E-value=16 Score=26.51 Aligned_cols=20 Identities=25% Similarity=0.345 Sum_probs=16.8
Q ss_pred CceecchhHHHHHHHHHhcC
Q 027174 1 MCMGVTAGAYILTLFAMKYR 20 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P 20 (227)
+++|-|.|+.+|..+|..++
T Consensus 31 ~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 31 IIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred EEEEeCHHHHHHHHHHcCCC
Confidence 46899999999999997654
No 244
>PRK10279 hypothetical protein; Provisional
Probab=39.67 E-value=18 Score=28.93 Aligned_cols=20 Identities=15% Similarity=0.301 Sum_probs=17.2
Q ss_pred CceecchhHHHHHHHHHhcC
Q 027174 1 MCMGVTAGAYILTLFAMKYR 20 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P 20 (227)
+++|-|+|+.++..||....
T Consensus 36 ~i~GtS~GAlvga~yA~g~~ 55 (300)
T PRK10279 36 IVAGCSIGSLVGAAYACDRL 55 (300)
T ss_pred EEEEEcHHHHHHHHHHcCCh
Confidence 47899999999999997654
No 245
>PF08187 Tetradecapep: Myoactive tetradecapeptides family; InterPro: IPR012619 This entry consists of myoactive tetradecapeptides that are isolated from the gut of Earthworms, Eisenia foetida (Common brandling worm) and Pheretima vittata (Earthworm). These peptides were termed ETP and PTP respectively. Both peptides showed a potent excitatory action on spontaneous contractions of the anterior gut. These peptides show similarity to Molluscan tetradecapeptides and Arthropodan tridecapeptides [].; GO: 0005184 neuropeptide hormone activity, 0007218 neuropeptide signaling pathway, 0005576 extracellular region
Probab=39.35 E-value=12 Score=14.52 Aligned_cols=7 Identities=57% Similarity=0.776 Sum_probs=4.3
Q ss_pred ccccccc
Q 027174 219 KTRISAG 225 (227)
Q Consensus 219 ~~~~~~~ 225 (227)
+||||.|
T Consensus 7 adrishg 13 (14)
T PF08187_consen 7 ADRISHG 13 (14)
T ss_pred hhhhhcC
Confidence 5666655
No 246
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=38.04 E-value=39 Score=28.49 Aligned_cols=40 Identities=13% Similarity=0.144 Sum_probs=23.9
Q ss_pred ccEEEEecCCCcccchHHHHHhhhcCCCcEEEEecCCCCCCCc
Q 027174 122 CRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTE 164 (227)
Q Consensus 122 ~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~ 164 (227)
-.+++..|+.|++.... ...... ......+|+|++|..-+
T Consensus 377 tnviFtNG~~DPW~~lg--v~~~~~-~~~~~~~I~g~~Hc~Dl 416 (434)
T PF05577_consen 377 TNVIFTNGELDPWRALG--VTSDSS-DSVPAIVIPGGAHCSDL 416 (434)
T ss_dssp -SEEEEEETT-CCGGGS----S-SS-SSEEEEEETT--TTGGG
T ss_pred CeEEeeCCCCCCccccc--CCCCCC-CCcccEEECCCeeeccc
Confidence 37999999999997544 222232 45567789999996543
No 247
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=37.45 E-value=20 Score=28.11 Aligned_cols=18 Identities=22% Similarity=0.268 Sum_probs=14.0
Q ss_pred CceecchhHHHHHHHHHh
Q 027174 1 MCMGVTAGAYILTLFAMK 18 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~ 18 (227)
.++|||+|=..|+..|..
T Consensus 86 ~v~GhS~GE~aAa~~aG~ 103 (290)
T TIGR00128 86 FAAGHSLGEYSALVAAGA 103 (290)
T ss_pred EEeecCHHHHHHHHHhCC
Confidence 368999999888776543
No 248
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=37.33 E-value=17 Score=29.20 Aligned_cols=16 Identities=25% Similarity=0.411 Sum_probs=12.2
Q ss_pred CceecchhHHHHHHHH
Q 027174 1 MCMGVTAGAYILTLFA 16 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A 16 (227)
+++|||+|=..|+..|
T Consensus 87 ~v~GhSlGE~aA~~aa 102 (318)
T PF00698_consen 87 AVIGHSLGEYAALVAA 102 (318)
T ss_dssp EEEESTTHHHHHHHHT
T ss_pred eeeccchhhHHHHHHC
Confidence 3789999977776554
No 249
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=36.68 E-value=22 Score=26.95 Aligned_cols=19 Identities=37% Similarity=0.433 Sum_probs=16.2
Q ss_pred ceecchhHHHHHHHHHhcC
Q 027174 2 CMGVTAGAYILTLFAMKYR 20 (227)
Q Consensus 2 lvGhS~Gg~ia~~~A~~~P 20 (227)
++|-|.|+.+|..+|..++
T Consensus 32 i~GtSaGAi~aa~~a~g~~ 50 (221)
T cd07210 32 ISGTSAGALVGGLFASGIS 50 (221)
T ss_pred EEEeCHHHHHHHHHHcCCC
Confidence 6899999999999997543
No 250
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=35.80 E-value=24 Score=28.94 Aligned_cols=18 Identities=22% Similarity=0.386 Sum_probs=15.4
Q ss_pred CceecchhHHHHHHHHHh
Q 027174 1 MCMGVTAGAYILTLFAMK 18 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~ 18 (227)
++.|-|.||.+|..+|..
T Consensus 44 lIaGTStGgIIAa~la~g 61 (344)
T cd07217 44 FVGGTSTGSIIAACIALG 61 (344)
T ss_pred EEEEecHHHHHHHHHHcC
Confidence 368999999999999853
No 251
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=35.51 E-value=93 Score=26.25 Aligned_cols=66 Identities=9% Similarity=0.099 Sum_probs=38.3
Q ss_pred ccccEEEEecCCCcccchHHH-HHhhhcCCCc--EEEEecCCCCCC---CccChHHHHHHHHHHHhhCCccc
Q 027174 120 LQCRSLIFVGESSPFHSEAVH-MTSKIDRRYS--ALVEVQACGSMV---TEEQPHAMLIPMEYFLMGYGLYR 185 (227)
Q Consensus 120 i~~Pvlii~G~~D~~~~~~~~-~~~~~~~~~~--~~~~i~~~gH~~---~~e~p~~~~~~i~~fl~~~~~~~ 185 (227)
-..|+++++|.-|.+.++... +.+.+.+.+. -.+.+||.|+.. .-++.+.+.+.+.+||.+.....
T Consensus 188 ~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~~D~~~l~~aVLd~L~~~p~VD 259 (411)
T PF06500_consen 188 KPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLTQDSSRLHQAVLDYLASRPWVD 259 (411)
T ss_dssp S-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-S-CCHHHHHHHHHHHHSTTEE
T ss_pred CCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCCcCHHHHHHHHHHHHhcCCccC
Confidence 356999999999998755443 4444422233 345578887753 34556788999999998865443
No 252
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=35.40 E-value=1.8e+02 Score=22.61 Aligned_cols=54 Identities=11% Similarity=0.143 Sum_probs=33.8
Q ss_pred EEEecCCCccc--chHHHHHhhhcCCCcEEEEecCCCCCCCccChHHHHHHHHHHHhhCCc
Q 027174 125 LIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGL 183 (227)
Q Consensus 125 lii~G~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~~ 183 (227)
++|.|..|... ...+.+.+....++.++.++|-++. .|++..+...+.+++.+.
T Consensus 2 ~~iGG~~~~~~~~~i~~~~~~lag~~~~rI~~iptAS~-----~~~~~~~~~~~~~~~lG~ 57 (250)
T TIGR02069 2 VIIGGAEDKVGDREILREFVSRAGGEDAIIVIITSASE-----EPREVGERYITIFSRLGV 57 (250)
T ss_pred eEEeCccccCChHHHHHHHHHHhCCCCceEEEEeCCCC-----ChHHHHHHHHHHHHHcCC
Confidence 45667767644 2333455555556678888887763 466666667777776654
No 253
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=35.35 E-value=24 Score=27.85 Aligned_cols=17 Identities=18% Similarity=0.184 Sum_probs=13.3
Q ss_pred CceecchhHHHHHHHHH
Q 027174 1 MCMGVTAGAYILTLFAM 17 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~ 17 (227)
+++|||+|-..|+.++.
T Consensus 85 ~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 85 AVVGHSLGEIAAAYVAG 101 (298)
T ss_pred EEEecCHHHHHHHHHhC
Confidence 36899999988876653
No 254
>PF06289 FlbD: Flagellar protein (FlbD); InterPro: IPR009384 This family consists of several bacterial FlbD flagellar proteins. The exact function of this family is unknown [].
Probab=35.28 E-value=61 Score=19.03 Aligned_cols=33 Identities=6% Similarity=0.049 Sum_probs=26.6
Q ss_pred CCcEEEEecCCCCCCCccChHHHHHHHHHHHhhC
Q 027174 148 RYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 181 (227)
Q Consensus 148 ~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 181 (227)
|+ +...+-++.+++-.|.++++.+.+.+|-++.
T Consensus 26 PD-TvItL~~G~k~vV~Es~~eVi~ki~~y~~~i 58 (60)
T PF06289_consen 26 PD-TVITLTNGKKYVVKESVEEVIEKIIEYRRKI 58 (60)
T ss_pred CC-eEEEEeCCCEEEEECCHHHHHHHHHHHHHhc
Confidence 77 4555556788889999999999999998764
No 255
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=35.22 E-value=47 Score=28.79 Aligned_cols=35 Identities=14% Similarity=0.165 Sum_probs=26.7
Q ss_pred CceecchhHHHHHHHHHh-----cCCccceEEEecCCCCC
Q 027174 1 MCMGVTAGAYILTLFAMK-----YRHRVLGLILVSPLCKA 35 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~-----~P~~V~~lili~~~~~~ 35 (227)
.+||+|+|+.+.++.... .-+.|..++|++++...
T Consensus 450 TLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~ 489 (633)
T KOG2385|consen 450 TLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPT 489 (633)
T ss_pred eEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccC
Confidence 379999999998866652 23468999999877653
No 256
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=32.20 E-value=27 Score=27.96 Aligned_cols=17 Identities=29% Similarity=0.528 Sum_probs=15.1
Q ss_pred CceecchhHHHHHHHHH
Q 027174 1 MCMGVTAGAYILTLFAM 17 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~ 17 (227)
+++|-|.||.+|+.++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 37899999999999886
No 257
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=32.02 E-value=19 Score=30.39 Aligned_cols=23 Identities=13% Similarity=0.378 Sum_probs=19.2
Q ss_pred CceecchhHHHHHHHHHhcCCcc
Q 027174 1 MCMGVTAGAYILTLFAMKYRHRV 23 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~~V 23 (227)
++.|-|.|+.+|..+|...++.+
T Consensus 104 vIsGTSaGAivAal~as~~~eel 126 (421)
T cd07230 104 IISGSSAGSIVAAILCTHTDEEI 126 (421)
T ss_pred EEEEECHHHHHHHHHHcCCHHHH
Confidence 57899999999999998766554
No 258
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=31.64 E-value=29 Score=27.46 Aligned_cols=19 Identities=32% Similarity=0.536 Sum_probs=16.2
Q ss_pred CceecchhHHHHHHHHHhc
Q 027174 1 MCMGVTAGAYILTLFAMKY 19 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~ 19 (227)
+++|-|.||.+|..+|..+
T Consensus 37 ~i~GTSaGaiia~~la~g~ 55 (288)
T cd07213 37 LFAGTSAGSLIALGLALGY 55 (288)
T ss_pred EEEEeCHHHHHHHHHHcCc
Confidence 3689999999999998654
No 259
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=31.19 E-value=33 Score=27.09 Aligned_cols=16 Identities=25% Similarity=0.422 Sum_probs=13.2
Q ss_pred ceecchhHHHHHHHHH
Q 027174 2 CMGVTAGAYILTLFAM 17 (227)
Q Consensus 2 lvGhS~Gg~ia~~~A~ 17 (227)
++|||+|=..|..++.
T Consensus 80 v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 80 VAGYSVGEYAAAVVAG 95 (295)
T ss_pred EeecCHHHHHHHHHhC
Confidence 6899999988887654
No 260
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=31.01 E-value=72 Score=26.54 Aligned_cols=49 Identities=14% Similarity=0.220 Sum_probs=24.1
Q ss_pred cCcccccEEEEecCCCcccchHHHHHhhhc-CCCcEEEEecCCCCCCCcc
Q 027174 117 LRKLQCRSLIFVGESSPFHSEAVHMTSKID-RRYSALVEVQACGSMVTEE 165 (227)
Q Consensus 117 l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~-~~~~~~~~i~~~gH~~~~e 165 (227)
...++.|+|+|..+.=........+.+... .++..+..+.|+.|.-+-|
T Consensus 270 ~~~i~~P~L~InSe~f~~~~~~~~~~~~~~~~~~~~~~ti~gt~H~s~sD 319 (379)
T PF03403_consen 270 YSKIPQPLLFINSESFQWWENIFRMKKVISNNKESRMLTIKGTAHLSFSD 319 (379)
T ss_dssp GGG--S-EEEEEETTT--HHHHHHHHTT--TTS-EEEEEETT--GGGGSG
T ss_pred ccCCCCCEEEEECcccCChhhHHHHHHHhccCCCcEEEEECCCcCCCcch
Confidence 457899999998875322223233333221 2567789999999965433
No 261
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=30.84 E-value=32 Score=24.74 Aligned_cols=19 Identities=37% Similarity=0.644 Sum_probs=16.0
Q ss_pred CceecchhHHHHHHHHHhc
Q 027174 1 MCMGVTAGAYILTLFAMKY 19 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~ 19 (227)
+++|-|.|+.+|..++...
T Consensus 31 ~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 31 IVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred EEEEECHHHHHHHHHHcCC
Confidence 3689999999999998653
No 262
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=30.83 E-value=32 Score=27.52 Aligned_cols=21 Identities=29% Similarity=0.488 Sum_probs=17.6
Q ss_pred CceecchhHHHHHHHHHhcCC
Q 027174 1 MCMGVTAGAYILTLFAMKYRH 21 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~ 21 (227)
++.|-|+|+.++..+|..+.+
T Consensus 42 ~iaGtS~GAiva~l~A~g~~~ 62 (306)
T COG1752 42 VIAGTSAGAIVAALYAAGMDE 62 (306)
T ss_pred EEEecCHHHHHHHHHHcCCCh
Confidence 478999999999999986543
No 263
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=30.50 E-value=29 Score=24.75 Aligned_cols=19 Identities=37% Similarity=0.581 Sum_probs=15.2
Q ss_pred CceecchhHHHHHHHHHhc
Q 027174 1 MCMGVTAGAYILTLFAMKY 19 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~ 19 (227)
++.|-|.||.+|..++...
T Consensus 30 ~i~GtS~Gal~a~~~~~~~ 48 (204)
T PF01734_consen 30 VISGTSAGALNAALLALGY 48 (204)
T ss_dssp EEEEECCHHHHHHHHHTC-
T ss_pred EEEEcChhhhhHHHHHhCC
Confidence 3689999999998887663
No 264
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=29.83 E-value=34 Score=27.84 Aligned_cols=15 Identities=40% Similarity=0.933 Sum_probs=12.8
Q ss_pred ceecchhHHHHHHHH
Q 027174 2 CMGVTAGAYILTLFA 16 (227)
Q Consensus 2 lvGhS~Gg~ia~~~A 16 (227)
++|||+|=..|+..|
T Consensus 128 ~~GHSlGE~aA~~~A 142 (343)
T PLN02752 128 CAGLSLGEYTALVFA 142 (343)
T ss_pred eeeccHHHHHHHHHh
Confidence 589999998888776
No 265
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=29.83 E-value=21 Score=29.93 Aligned_cols=26 Identities=15% Similarity=0.358 Sum_probs=21.0
Q ss_pred CceecchhHHHHHHHHHhcCCccceE
Q 027174 1 MCMGVTAGAYILTLFAMKYRHRVLGL 26 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~~V~~l 26 (227)
+++|-|.|+.+|..+|...++.+..+
T Consensus 98 iI~GtSAGAivaalla~~t~~el~~~ 123 (407)
T cd07232 98 VISGTSGGSLVAALLCTRTDEELKQL 123 (407)
T ss_pred EEEEECHHHHHHHHHHcCCHHHHHHH
Confidence 57899999999999998766655444
No 266
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=29.82 E-value=1.1e+02 Score=23.97 Aligned_cols=58 Identities=16% Similarity=0.143 Sum_probs=36.8
Q ss_pred cccEEEEecC------CCcccchH--HHHHhhhcC--CCcEEEEecC--CCCCCCccChHHHHHHHHHHHh
Q 027174 121 QCRSLIFVGE------SSPFHSEA--VHMTSKIDR--RYSALVEVQA--CGSMVTEEQPHAMLIPMEYFLM 179 (227)
Q Consensus 121 ~~Pvlii~G~------~D~~~~~~--~~~~~~~~~--~~~~~~~i~~--~gH~~~~e~p~~~~~~i~~fl~ 179 (227)
++.+|-|.|+ .|..++.. ..+...+.+ ...+-.++.| +.|.-..|++ +|.+.|.+||=
T Consensus 184 ~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~~~~Y~e~~v~G~~a~HS~LheN~-~V~~~I~~FLw 253 (255)
T PF06028_consen 184 NIQVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNRAKSYQEKTVTGKDAQHSQLHENP-QVDKLIIQFLW 253 (255)
T ss_dssp T-EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTTSSEEEEEEEESGGGSCCGGGCCH-HHHHHHHHHHC
T ss_pred CeEEEEEecccCCCCCCCeEEeHHHHHHHHHHhhcccCceEEEEEECCCCccccCCCCH-HHHHHHHHHhc
Confidence 5689999998 56666432 324444432 2334555654 6898777777 67799999983
No 267
>KOG3363 consensus Uncharacterized conserved nuclear protein [Function unknown]
Probab=29.74 E-value=83 Score=22.69 Aligned_cols=45 Identities=13% Similarity=0.298 Sum_probs=32.0
Q ss_pred chHHHHHhhhcCCCcEEEEecCCCCCCCccChHHHHHHHHHHHhhCCccc
Q 027174 136 SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLYR 185 (227)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~~~~ 185 (227)
+++..+...+. |...+.++ |||-.- +|+.+...+++|+++++..-
T Consensus 99 ~dSLslF~tle-PkidlLIv-G~Gd~~---~p~~v~~~V~~F~k~~ki~l 143 (196)
T KOG3363|consen 99 TDSLSLFQTLE-PKIDLLIV-GCGDKK---HPDKVRPSVRQFVKSHKIKL 143 (196)
T ss_pred cchHhHhhhcC-CCccEEEE-ecCCcC---CchhcCHHHHHHHHHhCcce
Confidence 45555666564 66666666 788654 48889999999999876543
No 268
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=29.17 E-value=16 Score=32.33 Aligned_cols=32 Identities=16% Similarity=0.143 Sum_probs=27.1
Q ss_pred ceecchhHHHHHHHHHhcCCccceEEEecCCC
Q 027174 2 CMGVTAGAYILTLFAMKYRHRVLGLILVSPLC 33 (227)
Q Consensus 2 lvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~ 33 (227)
+.|.|-||.++-...-.+|+.+.++|+--|..
T Consensus 553 i~G~SaGGlLvga~iN~rPdLF~avia~Vpfm 584 (712)
T KOG2237|consen 553 IEGGSAGGLLVGACINQRPDLFGAVIAKVPFM 584 (712)
T ss_pred EecccCccchhHHHhccCchHhhhhhhcCcce
Confidence 46999999999999999999999888755544
No 269
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=28.17 E-value=42 Score=28.85 Aligned_cols=34 Identities=18% Similarity=0.235 Sum_probs=29.5
Q ss_pred CceecchhHHHHHHHHHhcCCccceEEEecCCCC
Q 027174 1 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 34 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~~V~~lili~~~~~ 34 (227)
|.+|-|+-|.++..+=..||+.+.|-|..+++..
T Consensus 175 itFGgSYsGsLsAW~R~~yPel~~GsvASSapv~ 208 (514)
T KOG2182|consen 175 ITFGGSYSGSLSAWFREKYPELTVGSVASSAPVL 208 (514)
T ss_pred EEECCCchhHHHHHHHHhCchhheeeccccccee
Confidence 5789999999999999999999999887766553
No 270
>PHA02911 C-type lectin-like protein; Provisional
Probab=27.74 E-value=36 Score=25.41 Aligned_cols=17 Identities=29% Similarity=0.335 Sum_probs=12.8
Q ss_pred CCCCCCCCCCcCCcccc
Q 027174 195 PLSPCCISPELLSPESM 211 (227)
Q Consensus 195 ~~~~~~~~~~~~~~~~~ 211 (227)
|-++--.+||++||+.+
T Consensus 85 ~~~~~~~~~~~~~~~~~ 101 (213)
T PHA02911 85 PDNLTIHCPEVPSPSEP 101 (213)
T ss_pred CCCCeeeCCCCCCCCCC
Confidence 44556678999999875
No 271
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=26.93 E-value=47 Score=25.42 Aligned_cols=19 Identities=21% Similarity=0.179 Sum_probs=16.6
Q ss_pred ceecchhHHHHHHHHHhcC
Q 027174 2 CMGVTAGAYILTLFAMKYR 20 (227)
Q Consensus 2 lvGhS~Gg~ia~~~A~~~P 20 (227)
++|-|.|+.+|..++...+
T Consensus 33 i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 33 LAGASAGSLAAACSASGLS 51 (233)
T ss_pred EEEEcHHHHHHHHHHcCCC
Confidence 6899999999999998653
No 272
>PF10913 DUF2706: Protein of unknown function (DUF2706); InterPro: IPR024444 This family of proteins with unknown function appears to be restricted to Rickettsia spp.
Probab=26.13 E-value=90 Score=17.57 Aligned_cols=26 Identities=15% Similarity=0.447 Sum_probs=19.0
Q ss_pred CCCCCCCCCcCCccccCc---cccccccc
Q 027174 196 LSPCCISPELLSPESMGL---KLKPIKTR 221 (227)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~---~~~~~~~~ 221 (227)
.-.+|++||.-|-+++.+ -+|||...
T Consensus 28 ikspcvs~didd~s~ls~npcirrpvnsi 56 (60)
T PF10913_consen 28 IKSPCVSADIDDNSSLSVNPCIRRPVNSI 56 (60)
T ss_pred ccCCccccccCCCcccccccccccccccc
Confidence 445699999999888765 46777543
No 273
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=25.49 E-value=54 Score=25.39 Aligned_cols=18 Identities=22% Similarity=0.252 Sum_probs=15.9
Q ss_pred ceecchhHHHHHHHHHhc
Q 027174 2 CMGVTAGAYILTLFAMKY 19 (227)
Q Consensus 2 lvGhS~Gg~ia~~~A~~~ 19 (227)
+.|-|.|+.+|..+|...
T Consensus 34 i~GtSAGAl~aa~~a~g~ 51 (245)
T cd07218 34 ISGASAGALAACCLLCDL 51 (245)
T ss_pred EEEEcHHHHHHHHHHhCC
Confidence 689999999999999854
No 274
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=25.28 E-value=53 Score=25.32 Aligned_cols=19 Identities=21% Similarity=0.300 Sum_probs=16.7
Q ss_pred ceecchhHHHHHHHHHhcC
Q 027174 2 CMGVTAGAYILTLFAMKYR 20 (227)
Q Consensus 2 lvGhS~Gg~ia~~~A~~~P 20 (227)
++|-|.|+.+|..+|...+
T Consensus 35 i~GtSAGAl~aa~~a~g~~ 53 (243)
T cd07204 35 IAGASAGAIVAAVVLCGVS 53 (243)
T ss_pred EEEEcHHHHHHHHHHhCCC
Confidence 6799999999999998763
No 275
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=24.58 E-value=34 Score=28.59 Aligned_cols=26 Identities=23% Similarity=0.427 Sum_probs=20.3
Q ss_pred CceecchhHHHHHHHHHhcCCccceE
Q 027174 1 MCMGVTAGAYILTLFAMKYRHRVLGL 26 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~~V~~l 26 (227)
|+.|-|.|+.+|..+|...++.+..+
T Consensus 114 ~i~GtS~Gaivaa~~a~~~~~e~~~~ 139 (391)
T cd07229 114 IITGTATGALIAALVGVHTDEELLRF 139 (391)
T ss_pred eEEEecHHHHHHHHHHcCCHHHHHHH
Confidence 57899999999999999655554443
No 276
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=24.16 E-value=74 Score=27.39 Aligned_cols=34 Identities=18% Similarity=0.092 Sum_probs=25.2
Q ss_pred CceecchhHHHHHHHHHh--cCCccceEEEecCCCC
Q 027174 1 MCMGVTAGAYILTLFAMK--YRHRVLGLILVSPLCK 34 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~--~P~~V~~lili~~~~~ 34 (227)
.|+|+|.||+.++.+.+. ....+.++|+.++...
T Consensus 183 Tl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 183 TLFGESAGAASILTLLAVPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred EEeeccchHHHHHHhhcCccchHHHHHHHHhCCCCC
Confidence 378999999988776653 3346888888877664
No 277
>PF08513 LisH: LisH; InterPro: IPR013720 The LisH motif is found in a large number of eukaryotic proteins, from metazoa, fungi and plants that have a wide range of functions. The recently solved structure of the LisH domain in the N-terminal region of LIS1 depicted it as a novel dimerization motif, and that other structural elements are likely to play an important role in dimerisation [, , ]. The LisH (lis homology) domain mediates protein dimerisation and tetramerisation. The LisH domain is found in Sif2, a component of the Set3 complex which is responsible for repressing meiotic genes. It has been shown that the LisH domain helps mediate interaction with components of the Set3 complex []. ; PDB: 2XTE_L 2XTC_B 2XTD_A 1UUJ_B.
Probab=24.11 E-value=96 Score=14.63 Aligned_cols=17 Identities=12% Similarity=0.120 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHhhCCcc
Q 027174 168 HAMLIPMEYFLMGYGLY 184 (227)
Q Consensus 168 ~~~~~~i~~fl~~~~~~ 184 (227)
+.++..|.+||.+.|+.
T Consensus 1 ~~Ln~lI~~YL~~~Gy~ 17 (27)
T PF08513_consen 1 EELNQLIYDYLVENGYK 17 (27)
T ss_dssp HHHHHHHHHHHHHCT-H
T ss_pred CHHHHHHHHHHHHCCcH
Confidence 46788899999988764
No 278
>KOG2214 consensus Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=23.98 E-value=26 Score=30.09 Aligned_cols=27 Identities=22% Similarity=0.431 Sum_probs=22.5
Q ss_pred CceecchhHHHHHHHHHhcCCccceEE
Q 027174 1 MCMGVTAGAYILTLFAMKYRHRVLGLI 27 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~~V~~li 27 (227)
|+.|-|+||.+|..++.+.-+.+..+.
T Consensus 205 IIsGsS~GaivAsl~~v~~~eEl~~Ll 231 (543)
T KOG2214|consen 205 IISGSSAGAIVASLVGVRSNEELKQLL 231 (543)
T ss_pred hhcCCchhHHHHHHHhhcchHHHHHHh
Confidence 678999999999999998877666643
No 279
>cd07216 Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=23.95 E-value=43 Score=26.81 Aligned_cols=16 Identities=19% Similarity=0.449 Sum_probs=14.0
Q ss_pred CceecchhHHHHHHHH
Q 027174 1 MCMGVTAGAYILTLFA 16 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A 16 (227)
++.|-|.||.||+.++
T Consensus 45 li~GTStGgiiA~~l~ 60 (309)
T cd07216 45 LIGGTSTGGLIAIMLG 60 (309)
T ss_pred eeeeccHHHHHHHHhc
Confidence 4689999999999886
No 280
>smart00667 LisH Lissencephaly type-1-like homology motif. Alpha-helical motif present in Lis1, treacle, Nopp140, some katanin p60 subunits, muskelin, tonneau, LEUNIG and numerous WD40 repeat-containing proteins. It is suggested that LisH motifs contribute to the regulation of microtubule dynamics, either by mediating dimerisation, or else by binding cytoplasmic dynein heavy chain or microtubules directly.
Probab=23.90 E-value=98 Score=14.66 Aligned_cols=19 Identities=11% Similarity=0.083 Sum_probs=14.9
Q ss_pred ChHHHHHHHHHHHhhCCcc
Q 027174 166 QPHAMLIPMEYFLMGYGLY 184 (227)
Q Consensus 166 ~p~~~~~~i~~fl~~~~~~ 184 (227)
+...+...|.+||.+.++.
T Consensus 2 ~~~~l~~lI~~yL~~~g~~ 20 (34)
T smart00667 2 SRSELNRLILEYLLRNGYE 20 (34)
T ss_pred cHHHHHHHHHHHHHHcCHH
Confidence 3567888999999888764
No 281
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=22.91 E-value=45 Score=26.73 Aligned_cols=23 Identities=22% Similarity=0.382 Sum_probs=18.4
Q ss_pred CceecchhHHHHHHHHHhcCCcc
Q 027174 1 MCMGVTAGAYILTLFAMKYRHRV 23 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~~V 23 (227)
++.|.|.|+.+|..++....+.+
T Consensus 100 ~i~GtSaGAi~aa~~~~~~~~El 122 (298)
T cd07206 100 VISGSSAGAIVAALLGTHTDEEL 122 (298)
T ss_pred EEEEEcHHHHHHHHHHcCCcHHH
Confidence 47899999999999998654444
No 282
>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=22.80 E-value=54 Score=25.39 Aligned_cols=18 Identities=22% Similarity=0.359 Sum_probs=15.9
Q ss_pred CceecchhHHHHHHHHHh
Q 027174 1 MCMGVTAGAYILTLFAMK 18 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~ 18 (227)
+++|-|.||.+|..++..
T Consensus 37 ~i~GtS~G~iia~~l~~~ 54 (258)
T cd07199 37 LIAGTSTGGIIALGLALG 54 (258)
T ss_pred eeeeccHHHHHHHHHhcC
Confidence 468999999999999876
No 283
>PF00976 ACTH_domain: Corticotropin ACTH domain; InterPro: IPR013531 Pro-opiomelanocortin is present in high levels in the pituitary and is processed into 3 major peptide families: adrenocorticotrophin (ACTH); alpha-, beta- and gamma-melanocyte- stimulating hormones (MSH); and beta-endorphin []. ACTH regulates the synthesis and release of glucocorticoids and, to some extent, aldosterone in the adrenal cortex. It is synthesised and released in response to corticotrophin-releasing factor at times of stress (i.e. heat, cold, infection, etc.), its release leading to increased metabolism. The action of MSH in man is poorly understood, but it may be involved in temperature regulation []. Full activity of ACTH resides in the first 20 N-terminal amino acids, the first 13 of which are identical to alpha-MSH [, ]. The function of this region is not known, though it is found near the centre of these proteins.
Probab=22.70 E-value=39 Score=17.59 Aligned_cols=10 Identities=40% Similarity=0.786 Sum_probs=7.7
Q ss_pred cCcccccccc
Q 027174 211 MGLKLKPIKT 220 (227)
Q Consensus 211 ~~~~~~~~~~ 220 (227)
+|-|+||||-
T Consensus 13 ~g~KRRPvKV 22 (39)
T PF00976_consen 13 VGRKRRPVKV 22 (39)
T ss_pred CCcccCccee
Confidence 5778888874
No 284
>TIGR03607 patatin-related protein. This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.
Probab=22.70 E-value=52 Score=30.02 Aligned_cols=17 Identities=29% Similarity=0.335 Sum_probs=15.3
Q ss_pred CceecchhHHHHHHHHH
Q 027174 1 MCMGVTAGAYILTLFAM 17 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~ 17 (227)
++.|.|+||.++..+|.
T Consensus 69 ~iaGTSAGAInaa~lA~ 85 (739)
T TIGR03607 69 VISGTSAGGINGVLLAY 85 (739)
T ss_pred eEEeeCHHHHHHHHHHc
Confidence 57899999999999986
No 285
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=22.52 E-value=19 Score=29.95 Aligned_cols=14 Identities=14% Similarity=0.292 Sum_probs=11.1
Q ss_pred ceecchhHHHHHHH
Q 027174 2 CMGVTAGAYILTLF 15 (227)
Q Consensus 2 lvGhS~Gg~ia~~~ 15 (227)
.+|||+||.++...
T Consensus 154 fvghSLGGLvar~A 167 (405)
T KOG4372|consen 154 FVGHSLGGLVARYA 167 (405)
T ss_pred eeeeecCCeeeeEE
Confidence 48999999987643
No 286
>PHA02595 tk.4 hypothetical protein; Provisional
Probab=22.09 E-value=60 Score=23.09 Aligned_cols=18 Identities=22% Similarity=0.172 Sum_probs=15.9
Q ss_pred cchhHHHHHHHHHhcCCc
Q 027174 5 VTAGAYILTLFAMKYRHR 22 (227)
Q Consensus 5 hS~Gg~ia~~~A~~~P~~ 22 (227)
..||+.||..+..++|+.
T Consensus 29 g~mG~GIA~~~k~~~P~~ 46 (154)
T PHA02595 29 HTMGSGIAGQLAKAFPQI 46 (154)
T ss_pred CcCChHHHHHHHHHcChH
Confidence 479999999999999963
No 287
>PF01090 Ribosomal_S19e: Ribosomal protein S19e; InterPro: IPR001266 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. This family includes a number of eukaryotic and archaebacterial ribosomal proteins; mammalian S19, Drosophila S19, Ascaris lumbricoides S19g (ALEP-1) and S19s, yeast YS16 (RP55A and RP55B), Aspergillus S16 and Haloarcula marismortui HS12.; GO: 0003735 structural constituent of ribosome, 0006412 translation, 0005622 intracellular, 0005840 ribosome; PDB: 3IZ6_S 3U5G_T 3U5C_T 3O30_M 3O2Z_M 3IZB_S 2XZN_T 2XZM_T 2V7F_A.
Probab=21.73 E-value=1.2e+02 Score=21.23 Aligned_cols=23 Identities=17% Similarity=0.275 Sum_probs=18.1
Q ss_pred ChHHHHHHHHHHHhhCCcccCCC
Q 027174 166 QPHAMLIPMEYFLMGYGLYRPTL 188 (227)
Q Consensus 166 ~p~~~~~~i~~fl~~~~~~~~~~ 188 (227)
.+++|.+.+.+||++.+...++.
T Consensus 7 ~a~~fI~~~A~~LK~~gki~~P~ 29 (139)
T PF01090_consen 7 PADEFIKALAEFLKKSGKIEPPE 29 (139)
T ss_dssp SHHHHHHHHHHHHTCSSTS--TS
T ss_pred CHHHHHHHHHHHHHHcCCcCCcc
Confidence 57899999999999887777666
No 288
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=21.63 E-value=61 Score=28.43 Aligned_cols=18 Identities=11% Similarity=0.104 Sum_probs=15.5
Q ss_pred ceecchhHHHHHHHHHhc
Q 027174 2 CMGVTAGAYILTLFAMKY 19 (227)
Q Consensus 2 lvGhS~Gg~ia~~~A~~~ 19 (227)
++|||+|=..|+..|--.
T Consensus 269 v~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 269 ALGYSKGEASMWASLGVW 286 (538)
T ss_pred EeecCHHHHHHHHHhCCC
Confidence 789999999999888655
No 289
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=21.57 E-value=2.5e+02 Score=23.79 Aligned_cols=51 Identities=8% Similarity=0.004 Sum_probs=31.3
Q ss_pred cEEEEecCCCcccchHHHHHhhhcCCCcEEEEecCCCCCCCccChHHHHHHHHHHHhh
Q 027174 123 RSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 180 (227)
Q Consensus 123 Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 180 (227)
.+..|+|.+|.-.. .-.+...+.+++.+| +||+ +.++-+.++..|.+=++.
T Consensus 398 ~v~CiYG~~e~d~~-----Cp~l~~~~~~~v~lp-GgHH-Fd~dy~~la~~il~~~~~ 448 (456)
T COG3946 398 RVQCIYGQEEKDTA-----CPSLKAKGVDTVKLP-GGHH-FDGDYEKLAKAILQGMRL 448 (456)
T ss_pred eeEEEecCcccccc-----CCcchhhcceeEecC-CCcc-cCccHHHHHHHHHHHHHh
Confidence 57778887665321 111111456788888 5666 356677888888777643
No 290
>PF05570 DUF765: Circovirus protein of unknown function (DUF765); InterPro: IPR008484 This family consists of several short (27-30aa) porcine and bovine circovirus ORF6 proteins of unknown function.
Probab=21.45 E-value=58 Score=15.27 Aligned_cols=24 Identities=29% Similarity=0.336 Sum_probs=13.1
Q ss_pred CCCCCCCCCCCCCCCCcCCccccC
Q 027174 189 SVSPRSPLSPCCISPELLSPESMG 212 (227)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~ 212 (227)
+++|-||.+.+-.|-|--|..-+|
T Consensus 3 sstpaspapsdils~~pqs~rppg 26 (29)
T PF05570_consen 3 SSTPASPAPSDILSSKPQSKRPPG 26 (29)
T ss_pred cCCCCCCCcHHHHhcCccccCCCC
Confidence 456777776665554444433333
No 291
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=21.43 E-value=38 Score=27.44 Aligned_cols=24 Identities=13% Similarity=0.325 Sum_probs=17.5
Q ss_pred CceecchhHHHHHHHHHhcCCccc
Q 027174 1 MCMGVTAGAYILTLFAMKYRHRVL 24 (227)
Q Consensus 1 IlvGhS~Gg~ia~~~A~~~P~~V~ 24 (227)
++.|-|.|+.+|..++...++.+.
T Consensus 99 ~i~GsSaGAivaa~~~~~t~~El~ 122 (323)
T cd07231 99 VIAGSSVGSIVCAIIATRTDEELQ 122 (323)
T ss_pred EEEEECHHHHHHHHHHcCCHHHHH
Confidence 467999999999888875444433
No 292
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=21.26 E-value=73 Score=24.81 Aligned_cols=19 Identities=26% Similarity=0.314 Sum_probs=16.8
Q ss_pred ceecchhHHHHHHHHHhcC
Q 027174 2 CMGVTAGAYILTLFAMKYR 20 (227)
Q Consensus 2 lvGhS~Gg~ia~~~A~~~P 20 (227)
++|-|.|+.++..||...+
T Consensus 36 i~GtSAGAl~aa~~asg~~ 54 (252)
T cd07221 36 FFGASAGALHCVTFLSGLP 54 (252)
T ss_pred EEEEcHHHHHHHHHHhCCC
Confidence 6899999999999997665
No 293
>PTZ00095 40S ribosomal protein S19; Provisional
Probab=20.59 E-value=2.1e+02 Score=20.80 Aligned_cols=27 Identities=7% Similarity=0.025 Sum_probs=21.0
Q ss_pred CCccChHHHHHHHHHHHhhCCcccCCC
Q 027174 162 VTEEQPHAMLIPMEYFLMGYGLYRPTL 188 (227)
Q Consensus 162 ~~~e~p~~~~~~i~~fl~~~~~~~~~~ 188 (227)
+..-.|+.|...+.+||++.+...++.
T Consensus 28 vkDVpa~~fI~~~A~~LK~~gki~~P~ 54 (169)
T PTZ00095 28 LKDVSPWRFIKAFAQHFKLEGKIFVPK 54 (169)
T ss_pred eeeCCHHHHHHHHHHHHHHcCCCCCCc
Confidence 344468899999999999887777666
No 294
>cd08769 DAP_dppA_2 Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacteriz
Probab=20.24 E-value=3.4e+02 Score=21.49 Aligned_cols=56 Identities=5% Similarity=0.132 Sum_probs=34.1
Q ss_pred CcccccEEEEecCCCcccchHHHHHhhhcCCCcEEEEecCC-CCCCC-ccChHHHHHHHHHHHh
Q 027174 118 RKLQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQAC-GSMVT-EEQPHAMLIPMEYFLM 179 (227)
Q Consensus 118 ~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~-gH~~~-~e~p~~~~~~i~~fl~ 179 (227)
....+|+.++.|++ ..+ .+..+.+ |+.+++.++.+ |++.- --.|++..+.|.+=.+
T Consensus 144 g~~gVPV~lVsGDd-~~~---~ea~~~~--P~~~tv~vK~~~gr~aA~~~~p~~a~~~I~~aa~ 201 (270)
T cd08769 144 GEFGVPVVLVAGDS-ELE---KEVKEET--PWAVFVPTKESLSRYSAKSPSMKKVKEELREAVK 201 (270)
T ss_pred hhcCCCEEEEecCH-HHH---HHHHHhC--CCceEEEEeeecCCCccccCCHHHHHHHHHHHHH
Confidence 44678999999965 222 3344556 78888877644 65443 3346666666655443
Done!