Query 027178
Match_columns 227
No_of_seqs 151 out of 1207
Neff 7.4
Searched_HMMs 46136
Date Fri Mar 29 06:07:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027178.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/027178hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0372 Serine/threonine speci 100.0 2.9E-77 6.3E-82 498.3 11.3 224 3-227 79-303 (303)
2 KOG0373 Serine/threonine speci 100.0 2.8E-71 6E-76 456.6 12.6 224 3-227 82-306 (306)
3 PTZ00239 serine/threonine prot 100.0 3.4E-65 7.3E-70 449.0 21.9 225 3-227 79-303 (303)
4 cd07415 MPP_PP2A_PP4_PP6 PP2A, 100.0 2.6E-64 5.6E-69 440.6 20.6 208 3-211 78-285 (285)
5 PTZ00480 serine/threonine-prot 100.0 2.7E-64 5.9E-69 445.0 21.0 209 3-213 95-304 (320)
6 cd07420 MPP_RdgC Drosophila me 100.0 2.2E-63 4.8E-68 439.7 19.5 204 3-208 88-321 (321)
7 KOG0374 Serine/threonine speci 100.0 1E-63 2.2E-68 442.8 16.7 207 3-210 96-303 (331)
8 cd07417 MPP_PP5_C PP5, C-termi 100.0 4E-62 8.6E-67 432.0 18.7 209 3-213 97-307 (316)
9 PTZ00244 serine/threonine-prot 100.0 6.1E-62 1.3E-66 426.9 19.2 205 3-209 88-293 (294)
10 cd07414 MPP_PP1_PPKL PP1, PPKL 100.0 7.8E-62 1.7E-66 426.5 19.2 206 3-210 86-292 (293)
11 KOG0371 Serine/threonine prote 100.0 4.9E-63 1.1E-67 415.4 8.6 223 4-227 97-319 (319)
12 smart00156 PP2Ac Protein phosp 100.0 6.2E-61 1.3E-65 417.2 19.8 206 3-210 64-270 (271)
13 cd07416 MPP_PP2B PP2B, metallo 100.0 2.4E-60 5.2E-65 419.3 19.5 209 3-214 79-301 (305)
14 KOG0375 Serine-threonine phosp 100.0 6E-62 1.3E-66 424.5 7.2 211 4-216 125-348 (517)
15 cd07419 MPP_Bsu1_C Arabidopsis 100.0 1.2E-57 2.5E-62 403.5 19.3 206 3-209 92-311 (311)
16 cd07418 MPP_PP7 PP7, metalloph 100.0 1.3E-57 2.9E-62 408.9 19.6 207 3-210 103-366 (377)
17 KOG0377 Protein serine/threoni 100.0 2.4E-49 5.1E-54 352.6 8.4 209 3-213 202-435 (631)
18 KOG0376 Serine-threonine phosp 100.0 8.2E-48 1.8E-52 347.9 9.4 209 3-213 251-461 (476)
19 cd00144 MPP_PPP_family phospho 100.0 1.8E-27 4E-32 200.2 16.6 181 3-195 34-224 (225)
20 cd07425 MPP_Shelphs Shewanella 99.6 2.4E-15 5.3E-20 126.3 8.4 144 3-181 42-197 (208)
21 PRK13625 bis(5'-nucleosyl)-tet 99.6 6.2E-14 1.3E-18 120.5 13.0 87 3-91 46-146 (245)
22 cd07413 MPP_PA3087 Pseudomonas 99.4 2.6E-12 5.7E-17 108.9 10.0 83 3-88 43-143 (222)
23 cd07423 MPP_PrpE Bacillus subt 99.4 7.1E-12 1.5E-16 106.9 12.1 85 3-90 47-142 (234)
24 cd07424 MPP_PrpA_PrpB PrpA and 99.4 2.8E-12 6E-17 107.4 9.3 133 3-165 38-183 (207)
25 cd07422 MPP_ApaH Escherichia c 99.3 7.5E-13 1.6E-17 114.6 4.6 93 3-100 36-133 (257)
26 COG0639 ApaH Diadenosine tetra 99.3 4.7E-12 1E-16 97.9 8.4 143 40-184 3-154 (155)
27 PRK00166 apaH diadenosine tetr 99.3 1.3E-11 2.8E-16 107.9 10.6 85 3-91 38-127 (275)
28 cd07421 MPP_Rhilphs Rhilph pho 99.3 6.1E-11 1.3E-15 103.9 13.8 163 3-197 44-292 (304)
29 PHA02239 putative protein phos 99.2 3.4E-11 7.4E-16 103.0 9.5 139 3-183 39-221 (235)
30 TIGR00668 apaH bis(5'-nucleosy 99.2 2.4E-11 5.1E-16 106.0 6.8 90 3-98 38-133 (279)
31 PRK11439 pphA serine/threonine 99.0 6.5E-10 1.4E-14 93.9 7.9 142 3-183 54-208 (218)
32 PRK09968 serine/threonine-spec 98.8 1.9E-08 4.2E-13 85.0 9.7 81 3-89 52-145 (218)
33 PF00149 Metallophos: Calcineu 97.9 8.3E-05 1.8E-09 56.8 8.1 124 3-161 41-199 (200)
34 cd07397 MPP_DevT Myxococcus xa 97.2 0.004 8.7E-08 53.5 10.6 41 49-89 119-159 (238)
35 cd00841 MPP_YfcE Escherichia c 95.8 0.12 2.5E-06 40.6 9.9 23 143-165 95-117 (155)
36 cd00838 MPP_superfamily metall 95.7 0.062 1.3E-06 39.5 7.4 29 138-166 91-119 (131)
37 TIGR00040 yfcE phosphoesterase 95.2 0.35 7.5E-06 38.2 10.5 22 142-163 98-119 (158)
38 KOG0918 Selenium-binding prote 95.0 0.00044 9.6E-09 62.8 -7.3 193 4-209 58-262 (476)
39 cd07379 MPP_239FB Homo sapiens 94.4 0.49 1.1E-05 36.3 9.3 31 136-166 90-120 (135)
40 cd07394 MPP_Vps29 Homo sapiens 94.2 1.9 4.2E-05 35.1 12.8 24 140-163 96-119 (178)
41 cd07404 MPP_MS158 Microscilla 93.8 0.18 4E-06 40.0 6.0 37 140-181 127-163 (166)
42 PF12850 Metallophos_2: Calcin 93.7 0.39 8.4E-06 37.1 7.7 56 138-197 97-152 (156)
43 cd07403 MPP_TTHA0053 Thermus t 93.7 0.56 1.2E-05 36.1 8.3 29 138-166 79-107 (129)
44 cd07400 MPP_YydB Bacillus subt 93.4 1 2.2E-05 34.6 9.4 30 138-167 101-130 (144)
45 cd07399 MPP_YvnB Bacillus subt 93.1 1.7 3.6E-05 36.4 11.0 71 138-209 136-213 (214)
46 PF06874 FBPase_2: Firmicute f 92.5 0.98 2.1E-05 43.8 9.5 158 50-210 376-586 (640)
47 KOG0376 Serine-threonine phosp 91.5 0.013 2.7E-07 54.6 -4.2 175 4-185 82-299 (476)
48 cd07395 MPP_CSTP1 Homo sapiens 88.8 14 0.0003 31.5 14.7 59 139-200 195-254 (262)
49 COG0622 Predicted phosphoester 85.7 18 0.00039 29.5 11.3 68 139-211 98-167 (172)
50 cd08163 MPP_Cdc1 Saccharomyces 82.5 23 0.00049 30.6 10.9 34 127-160 189-226 (257)
51 COG3855 Fbp Uncharacterized pr 77.4 16 0.00034 34.6 8.5 66 139-205 515-588 (648)
52 PRK09453 phosphodiesterase; Pr 69.2 4.5 9.8E-05 32.6 2.8 13 26-38 64-76 (182)
53 cd07390 MPP_AQ1575 Aquifex aeo 66.2 6.8 0.00015 31.3 3.2 32 3-39 52-83 (168)
54 cd07385 MPP_YkuE_C Bacillus su 65.7 5 0.00011 33.0 2.4 35 3-39 42-77 (223)
55 COG1407 Predicted ICC-like pho 65.0 5.2 0.00011 34.3 2.4 26 11-39 86-111 (235)
56 cd08166 MPP_Cdc1_like_1 unchar 64.6 25 0.00055 29.3 6.4 50 3-54 52-107 (195)
57 TIGR03729 acc_ester putative p 62.6 8.1 0.00018 32.6 3.2 29 136-164 195-223 (239)
58 cd00840 MPP_Mre11_N Mre11 nucl 60.3 13 0.00028 30.3 3.9 21 142-162 181-201 (223)
59 cd07393 MPP_DR1119 Deinococcus 59.9 11 0.00023 31.8 3.4 26 138-163 181-206 (232)
60 cd07384 MPP_Cdc1_like Saccharo 56.5 14 0.00031 29.7 3.5 35 146-182 130-168 (171)
61 PRK11340 phosphodiesterase Yae 55.1 23 0.0005 30.6 4.8 25 12-38 101-125 (271)
62 TIGR00619 sbcd exonuclease Sbc 54.1 20 0.00043 30.7 4.2 36 3-38 49-88 (253)
63 KOG2551 Phospholipase/carboxyh 53.3 8.9 0.00019 32.7 1.8 11 78-88 6-16 (230)
64 cd08165 MPP_MPPE1 human MPPE1 52.1 18 0.00039 28.6 3.4 13 26-38 77-89 (156)
65 PRK11148 cyclic 3',5'-adenosin 51.6 21 0.00046 30.7 4.0 26 137-162 181-207 (275)
66 cd07392 MPP_PAE1087 Pyrobaculu 51.5 17 0.00038 28.6 3.2 31 136-166 147-177 (188)
67 PRK05340 UDP-2,3-diacylglucosa 50.9 14 0.00031 31.2 2.8 65 138-208 175-239 (241)
68 cd07391 MPP_PF1019 Pyrococcus 50.8 21 0.00046 28.4 3.6 16 23-38 73-88 (172)
69 COG1768 Predicted phosphohydro 47.1 15 0.00032 30.6 2.1 59 20-91 68-126 (230)
70 COG4186 Predicted phosphoester 45.8 35 0.00076 27.7 4.0 19 23-41 71-89 (186)
71 cd07396 MPP_Nbla03831 Homo sap 44.8 33 0.00072 29.4 4.2 28 136-163 201-229 (267)
72 PRK10966 exonuclease subunit S 44.6 30 0.00065 32.0 4.0 36 3-39 49-88 (407)
73 cd07402 MPP_GpdQ Enterobacter 44.1 37 0.00081 28.1 4.3 26 138-163 169-195 (240)
74 PF05413 Peptidase_C34: Putati 43.3 11 0.00023 26.9 0.7 8 29-36 81-88 (92)
75 TIGR01854 lipid_A_lpxH UDP-2,3 43.3 27 0.00058 29.3 3.2 58 138-200 173-230 (231)
76 COG0420 SbcD DNA repair exonuc 41.9 35 0.00077 30.9 4.1 38 3-40 50-90 (390)
77 PF09637 Med18: Med18 protein; 41.3 42 0.00092 28.8 4.2 70 138-212 139-212 (250)
78 cd07383 MPP_Dcr2 Saccharomyces 40.9 44 0.00096 27.1 4.2 22 140-161 154-175 (199)
79 COG1409 Icc Predicted phosphoh 37.7 2.4E+02 0.0052 23.5 14.5 33 135-167 164-200 (301)
80 cd07398 MPP_YbbF-LpxH Escheric 37.2 42 0.00092 27.2 3.5 28 138-165 177-204 (217)
81 TIGR00024 SbcD_rel_arch putati 35.9 52 0.0011 27.8 3.9 13 26-38 90-102 (225)
82 cd07388 MPP_Tt1561 Thermus the 35.5 57 0.0012 27.6 4.0 53 136-197 165-217 (224)
83 PHA02546 47 endonuclease subun 35.2 47 0.001 29.8 3.7 35 4-38 50-89 (340)
84 COG2908 Uncharacterized protei 34.4 67 0.0014 27.7 4.2 53 137-200 174-228 (237)
85 smart00854 PGA_cap Bacterial c 31.9 84 0.0018 26.4 4.6 37 144-183 199-235 (239)
86 TIGR00583 mre11 DNA repair pro 31.1 79 0.0017 29.3 4.5 37 3-39 52-124 (405)
87 TIGR01854 lipid_A_lpxH UDP-2,3 30.3 1.2E+02 0.0026 25.3 5.3 26 12-38 56-81 (231)
88 KOG3339 Predicted glycosyltran 29.5 1.7E+02 0.0038 24.4 5.7 84 5-90 46-146 (211)
89 COG1312 UxuA D-mannonate dehyd 28.4 1.5E+02 0.0032 27.1 5.5 63 48-111 172-246 (362)
90 PF04021 Class_IIIsignal: Clas 27.4 46 0.00099 18.7 1.4 16 6-21 2-17 (28)
91 cd07386 MPP_DNA_pol_II_small_a 27.0 46 0.00099 28.1 2.1 14 26-39 82-95 (243)
92 PRK03906 mannonate dehydratase 24.9 1.5E+02 0.0033 27.3 5.2 63 48-111 194-268 (385)
93 PF03113 RSV_NS2: Respiratory 23.5 1.7E+02 0.0036 21.7 4.1 73 3-77 15-98 (124)
94 PF10083 DUF2321: Uncharacteri 22.8 26 0.00055 28.2 -0.2 45 138-189 23-76 (158)
95 TIGR00695 uxuA mannonate dehyd 21.7 2.2E+02 0.0049 26.4 5.6 62 49-111 195-268 (394)
96 PRK05340 UDP-2,3-diacylglucosa 21.2 3.3E+02 0.0072 22.7 6.3 28 10-38 56-83 (241)
97 PF03786 UxuA: D-mannonate deh 20.1 2E+02 0.0042 26.3 4.8 84 21-110 144-239 (351)
No 1
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-77 Score=498.32 Aligned_cols=224 Identities=58% Similarity=1.155 Sum_probs=216.6
Q ss_pred ccCCCCCcHHHHHHHHHHHHhCCCcEEEeccCCcCccccccCCcHHHHHHHhCChhHHHHHHHHHhhhhhheeecCeEEE
Q 027178 3 QRQITYLCLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLC 82 (227)
Q Consensus 3 ~vDRG~~s~Evl~~L~~LK~~~P~~v~lLRGNHE~~~~~~~~gF~~e~~~~~g~~~~~~~~~~~f~~LPlaaii~~~ilc 82 (227)
.||||.+|+|++++|++||++||++|+|||||||++.++..|||++||.+|||+..+|+.++++|++||+||+|+++|||
T Consensus 79 yVDRG~~SvEt~lLLl~lK~rYP~ritLiRGNHEsRqitqvYGFY~EclrKYG~~~vWr~c~eiFdyL~l~aiid~kifC 158 (303)
T KOG0372|consen 79 YVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSANVWRYCTEIFDYLSLAAIIDGKIFC 158 (303)
T ss_pred hhccccchHHHHHHHHHHhhcCcceeEEeeccchhhhhhhhhhHHHHHHHHcCChHHHHHHHHHHHhhhHhheecCcEEE
Confidence 38999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCcCCCCCCHhhhhhhhcccCCCCCCcccccccCCCCCCCCcccCCCCceeecChhhHHhhhhhcCceEEEeccceee
Q 027178 83 VHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQ 162 (227)
Q Consensus 83 vHgGi~~~~~~l~~i~~i~r~~~~~~~~~~~dlLWsDP~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~l~~iIRgHe~~~ 162 (227)
||||+||.++++++|+.+.|.+++|+++.++|+|||||.+.++|.-||||+|++||++++++|++.||+++|.|+||.|.
T Consensus 159 VHGGlSP~i~~lDqIr~lDR~~Eiph~g~m~DllWSDPee~~g~~~SPRGaGylFG~dvv~~F~~~N~~~~I~RaHQLv~ 238 (303)
T KOG0372|consen 159 VHGGLSPSIQTLDQIRVLDRKQEVPHDGAMCDLLWSDPEEGPGWGLSPRGAGYLFGEDVVESFLEANGLSLICRAHQLVM 238 (303)
T ss_pred EcCCCCcchhhHHHHHHhhccccCCCCCcchheeccCcccCCCcccCCCCccccccHHHHHHHHHhCChHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeEecCCeEEEEEcCCCCCccCCCcEEEEEEcCCCceEEEEeecccccCC-CCCCCCCCCCCC
Q 027178 163 EGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMEREVKFFTETEENNQ-MRGPRTGVPYFL 227 (227)
Q Consensus 163 ~G~~~~~~~~~~iTifSa~~y~~~~~N~~avl~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 227 (227)
+||++.| +++++|||||||||++++|.||+|+|+++....|..|++.|..+. ....+.+.+|||
T Consensus 239 eGyk~~F-~~~v~TVWSAPNYCYrCGN~AsIl~lde~~~~~F~vFeaa~~~~~~~~~kk~~~~yFl 303 (303)
T KOG0372|consen 239 EGYKWHF-DEKVVTVWSAPNYCYRCGNVAAILELDEDLDKDFRVFEAAPQESRGIPAKKPIADYFL 303 (303)
T ss_pred hhHHHhc-CCceEEEecCCchhhhcCChHHheeeccccCcceEeeecchhhhcCCcccCcchhhcC
Confidence 9999999 999999999999999999999999999999999999999998854 444566779996
No 2
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-71 Score=456.65 Aligned_cols=224 Identities=78% Similarity=1.382 Sum_probs=219.3
Q ss_pred ccCCCCCcHHHHHHHHHHHHhCCCcEEEeccCCcCccccccCCcHHHHHHHhCChhHHHHHHHHHhhhhhheeecCeEEE
Q 027178 3 QRQITYLCLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLC 82 (227)
Q Consensus 3 ~vDRG~~s~Evl~~L~~LK~~~P~~v~lLRGNHE~~~~~~~~gF~~e~~~~~g~~~~~~~~~~~f~~LPlaaii~~~ilc 82 (227)
-||||.+|+|++.+|++||.+||.+|.|||||||++.++..|||++||..|||+.++|+.+.++|+.|++||+|+++|||
T Consensus 82 fVDRGyySLEtfT~l~~LkaryP~~ITLlRGNHEsRqitqVYGFydECq~KYGnan~wkycckVFD~LtlaAiID~~vLC 161 (306)
T KOG0373|consen 82 FVDRGYYSLETFTLLLLLKARYPAKITLLRGNHESRQITQVYGFYDECQNKYGNANVWKYCCKVFDFLTLAAIIDEKVLC 161 (306)
T ss_pred ccccccccHHHHHHHHHHhhcCCceeEEeeccchhhhhhhhhhhHHHHHhhcCCchHHHHHHHHHhhhhHHHHhcCcEEE
Confidence 38999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCcCCCCCCHhhhhhhhcccCCCCCCcccccccCCCCCCCCcccCCCCceeecChhhHHhhhhhcCceEEEeccceee
Q 027178 83 VHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQ 162 (227)
Q Consensus 83 vHgGi~~~~~~l~~i~~i~r~~~~~~~~~~~dlLWsDP~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~l~~iIRgHe~~~ 162 (227)
||||+||.+.++++|+-|.|.+++|+++.++|++||||.+.+.|.-||||+||+||.+++.+|+..|++++|.|+||.|+
T Consensus 162 VHGGLSPdirtlDqir~i~R~qEiPh~G~fcDlmWSDPedve~W~vSpRGAGwlFGskVt~eF~~iN~L~LicRaHQLV~ 241 (306)
T KOG0373|consen 162 VHGGLSPDIRTLDQIRLIERNQEIPHEGPFCDLMWSDPEDVETWAVSPRGAGWLFGSKVTTEFNHINNLNLICRAHQLVQ 241 (306)
T ss_pred EcCCCCccceeHHHHHhHHhhccCCCCCCccceeccChhhhhhheeCCCCcceeechhhhHHHHhccchHHHHhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeEecCCe-EEEEEcCCCCCccCCCcEEEEEEcCCCceEEEEeecccccCCCCCCCCCCCCCC
Q 027178 163 EGLKYMFQDKG-LVTVWSAPNYCYRCGNVASILSFNENMEREVKFFTETEENNQMRGPRTGVPYFL 227 (227)
Q Consensus 163 ~G~~~~~~~~~-~iTifSa~~y~~~~~N~~avl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (227)
+||++.| +.| ++|||||||||++++|.|+||.++++++.++..|.+.|..+++.-+|+..+|||
T Consensus 242 EG~KymF-~eK~lvTVWSAPNYCYRCGNvAsi~~~d~~~~r~~k~F~avpd~~~~~p~r~~~pYFl 306 (306)
T KOG0373|consen 242 EGFKYMF-DEKGLVTVWSAPNYCYRCGNVASIMSFDDNLERETKIFSAVPDNSRVIPPRTRAPYFL 306 (306)
T ss_pred hhHHhcc-CCCCEEEEecCCchhhhccCeeeEEEecccCCccceeeeecCCccccCCCCCCCCCcC
Confidence 9999999 555 999999999999999999999999999999999999999988888899999997
No 3
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=100.00 E-value=3.4e-65 Score=448.98 Aligned_cols=225 Identities=64% Similarity=1.158 Sum_probs=210.8
Q ss_pred ccCCCCCcHHHHHHHHHHHHhCCCcEEEeccCCcCccccccCCcHHHHHHHhCChhHHHHHHHHHhhhhhheeecCeEEE
Q 027178 3 QRQITYLCLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLC 82 (227)
Q Consensus 3 ~vDRG~~s~Evl~~L~~LK~~~P~~v~lLRGNHE~~~~~~~~gF~~e~~~~~g~~~~~~~~~~~f~~LPlaaii~~~ilc 82 (227)
.||||++|+||+.+|+++|+.+|.+|++||||||.+.++..|||.+|+..+||...+|+.++++|++||+||+|++++||
T Consensus 79 yVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~ky~~~~~~~~~~~~f~~LPlaaii~~~i~c 158 (303)
T PTZ00239 79 FVDRGYNSVETMEYLLCLKVKYPGNITLLRGNHESRQCTQVYGFYEEILRKYGNSNPWRLFMDVFDCLPLAALIEGQILC 158 (303)
T ss_pred EcCCCCCHHHHHHHHHHhhhcCCCcEEEEecccchHHHhhhcChHHHHHHHhcChhHHHHHHHHHHhCchheEEcCeEEE
Confidence 58999999999999999999999999999999999999999999999999998888999999999999999999999999
Q ss_pred eecCcCCCCCCHhhhhhhhcccCCCCCCcccccccCCCCCCCCcccCCCCceeecChhhHHhhhhhcCceEEEeccceee
Q 027178 83 VHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQ 162 (227)
Q Consensus 83 vHgGi~~~~~~l~~i~~i~r~~~~~~~~~~~dlLWsDP~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~l~~iIRgHe~~~ 162 (227)
|||||+|.+.++++|++|+||.+.|.++++.|+|||||.+.++|.+++||.|+.||++++++||++|++++||||||+++
T Consensus 159 vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~ 238 (303)
T PTZ00239 159 VHGGLSPDMRTIDQIRTIDRKIEIPHEGPFCDLMWSDPEEVEYWAVNSRGAGYLFGAKVTKEFCRLNDLTLICRAHQLVM 238 (303)
T ss_pred EcCccCcccccHhhhccccCCCCCCCCCCceeeEecCccccCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcChhhc
Confidence 99999999999999999999999999999999999999988899999999999999999999999999999999999999
Q ss_pred cceeeEecCCeEEEEEcCCCCCccCCCcEEEEEEcCCCceEEEEeecccccCCCCCCCCCCCCCC
Q 027178 163 EGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMEREVKFFTETEENNQMRGPRTGVPYFL 227 (227)
Q Consensus 163 ~G~~~~~~~~~~iTifSa~~y~~~~~N~~avl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (227)
+||++.+.+++|+||||||+||+..+|+||+|.++++.+++|.+|+|.+++.+....+..+.||+
T Consensus 239 ~G~~~~~~~~~~iTvfSa~~Y~~~~~N~~ail~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (303)
T PTZ00239 239 EGYKYWFPDQNLVTVWSAPNYCYRCGNIASILCLDENLQQTWKTFKEVPESAKSINPKNVLPYFL 303 (303)
T ss_pred cceEEEeCCCeEEEEECCCcccCCCCceEEEEEECCCCcEeeEEeeCCCcccccCcccCCCCCCC
Confidence 99998774556999999999999999999999999999999999999988744344444456774
No 4
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=100.00 E-value=2.6e-64 Score=440.63 Aligned_cols=208 Identities=66% Similarity=1.247 Sum_probs=202.3
Q ss_pred ccCCCCCcHHHHHHHHHHHHhCCCcEEEeccCCcCccccccCCcHHHHHHHhCChhHHHHHHHHHhhhhhheeecCeEEE
Q 027178 3 QRQITYLCLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLC 82 (227)
Q Consensus 3 ~vDRG~~s~Evl~~L~~LK~~~P~~v~lLRGNHE~~~~~~~~gF~~e~~~~~g~~~~~~~~~~~f~~LPlaaii~~~ilc 82 (227)
.||||++|+||+.+|++||+.+|.+|++||||||.+.++..|||.+||..+|+...+|+.++++|++||+||++++++||
T Consensus 78 yVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~ygf~~e~~~~y~~~~l~~~~~~~f~~lPlaaii~~~i~c 157 (285)
T cd07415 78 YVDRGYYSVETFLLLLALKVRYPDRITLLRGNHESRQITQVYGFYDECLRKYGNANVWKYCTDLFDYLPLAALIDNQIFC 157 (285)
T ss_pred ECCCCcCHHHHHHHHHHHhhcCCCcEEEEecccchHhhhhhcchhHHHHHhcCchHHHHHHHHHHHHhHHHhEeCCeEEE
Confidence 58999999999999999999999999999999999999999999999999998789999999999999999999999999
Q ss_pred eecCcCCCCCCHhhhhhhhcccCCCCCCcccccccCCCCCCCCcccCCCCceeecChhhHHhhhhhcCceEEEeccceee
Q 027178 83 VHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQ 162 (227)
Q Consensus 83 vHgGi~~~~~~l~~i~~i~r~~~~~~~~~~~dlLWsDP~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~l~~iIRgHe~~~ 162 (227)
|||||+|.+.++++|++|+||.+.+.++++.|+|||||.+..+|.+++||.|+.||++++++||++|++++||||||+++
T Consensus 158 vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~ 237 (285)
T cd07415 158 VHGGLSPSIDTLDQIRAIDRFQEVPHEGPMCDLLWSDPDDIEGWGISPRGAGYLFGQDVVEEFNHNNGLTLICRAHQLVM 237 (285)
T ss_pred EcCCCCCCcccHHHhhcccCCCCCCCCCCccceEecCCCccCCCCcCCCCCccccCHHHHHHHHHHCCCeEEEEcCcccc
Confidence 99999999999999999999999999999999999999988899999999999999999999999999999999999999
Q ss_pred cceeeEecCCeEEEEEcCCCCCccCCCcEEEEEEcCCCceEEEEeeccc
Q 027178 163 EGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMEREVKFFTETE 211 (227)
Q Consensus 163 ~G~~~~~~~~~~iTifSa~~y~~~~~N~~avl~i~~~~~~~~~~~~~~~ 211 (227)
+||++.+ +++|+||||||+||+..+|+||+|.|++++++++.+|+|+|
T Consensus 238 ~G~~~~~-~~~~~TvfSa~~y~~~~~n~~a~l~i~~~~~~~~~~~~~~~ 285 (285)
T cd07415 238 EGYQWMF-DDKLVTVWSAPNYCYRCGNVASIMELDEHLKRSFKVFEAAP 285 (285)
T ss_pred ceEEEec-CCcEEEEecCCcccCCCCceEEEEEECCCCcEeEEEeccCC
Confidence 9999988 99999999999999988999999999999999999999875
No 5
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=100.00 E-value=2.7e-64 Score=445.01 Aligned_cols=209 Identities=40% Similarity=0.850 Sum_probs=202.3
Q ss_pred ccCCCCCcHHHHHHHHHHHHhCCCcEEEeccCCcCccccccCCcHHHHHHHhCChhHHHHHHHHHhhhhhheeecCeEEE
Q 027178 3 QRQITYLCLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLC 82 (227)
Q Consensus 3 ~vDRG~~s~Evl~~L~~LK~~~P~~v~lLRGNHE~~~~~~~~gF~~e~~~~~g~~~~~~~~~~~f~~LPlaaii~~~ilc 82 (227)
.||||++|+||+.+|+++|+.+|++|++||||||.+.++..|||..||..+| ...+|+.++++|++||+||+|+++|||
T Consensus 95 yVDRG~~s~evl~ll~~lki~~p~~v~llRGNHE~~~~~~~ygF~~e~~~~y-~~~l~~~~~~~F~~LPlaAiI~~~i~c 173 (320)
T PTZ00480 95 YVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-TIKLWKTFTDCFNCLPVAALIDEKILC 173 (320)
T ss_pred ecCCCCCcHHHHHHHHHhcccCCCceEEEecccchhhhhhhcchHHHHHhhc-CHHHHHHHHHHHHhccHhheecCcEEE
Confidence 5899999999999999999999999999999999999999999999999999 578999999999999999999999999
Q ss_pred eecCcCCCCCCHhhhhhhhcccCCCCCCcccccccCCCCC-CCCcccCCCCceeecChhhHHhhhhhcCceEEEecccee
Q 027178 83 VHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPED-IETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLV 161 (227)
Q Consensus 83 vHgGi~~~~~~l~~i~~i~r~~~~~~~~~~~dlLWsDP~~-~~~~~~~~rg~g~~fg~~~~~~fl~~~~l~~iIRgHe~~ 161 (227)
|||||+|.+.++++|++|.||.+.+.++++.|+|||||.+ ..+|.+++||.|++||++++++||++|++++||||||++
T Consensus 174 vHGGI~p~~~~l~~i~~i~rp~~~~~~~~~~dllWSDP~~~~~~~~~s~RG~g~~FG~~~~~~Fl~~n~l~~IiR~Hq~v 253 (320)
T PTZ00480 174 MHGGLSPELSNLEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWADNERGVSYVFSQEIVQVFLKKHELDLICRAHQVV 253 (320)
T ss_pred EcCCcCcccCCHHHHhcccCCCCCCccchhhheeecCcccccCCCccCCCCCccccCHHHHHHHHHhCCCcEEEEcCccc
Confidence 9999999999999999999999999999999999999995 678999999999999999999999999999999999999
Q ss_pred ecceeeEecCCeEEEEEcCCCCCccCCCcEEEEEEcCCCceEEEEeeccccc
Q 027178 162 QEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMEREVKFFTETEEN 213 (227)
Q Consensus 162 ~~G~~~~~~~~~~iTifSa~~y~~~~~N~~avl~i~~~~~~~~~~~~~~~~~ 213 (227)
++||++.+ +++|+||||||+||+..+|+||+|.|++++.++|.+|+|.+.+
T Consensus 254 ~~G~~~~~-~~~~iTvFSa~~Y~~~~~N~ga~l~i~~~~~~~~~~~~p~~~~ 304 (320)
T PTZ00480 254 EDGYEFFS-KRQLVTLFSAPNYCGEFDNAGSMMTIDESLMCSFQILKPAEQG 304 (320)
T ss_pred cCceEEeC-CCcEEEEeCCcccCCCCCccEEEEEECCCCcEeEEEecCCccc
Confidence 99999987 9999999999999999999999999999999999999988777
No 6
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=100.00 E-value=2.2e-63 Score=439.70 Aligned_cols=204 Identities=30% Similarity=0.505 Sum_probs=187.9
Q ss_pred ccCCCCCcHHHHHHHHHHHHhCCCcEEEeccCCcCccccccCCcHHHHHHHhCC--hhHHHHHHHHHhhhhhheeecCeE
Q 027178 3 QRQITYLCLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGN--ANAWRYCTDVFDYLTLSAIIDGTV 80 (227)
Q Consensus 3 ~vDRG~~s~Evl~~L~~LK~~~P~~v~lLRGNHE~~~~~~~~gF~~e~~~~~g~--~~~~~~~~~~f~~LPlaaii~~~i 80 (227)
.||||++|+||+.+|++||+++|++|++||||||.+.++..|||.+||..+|+. ..+|+.++++|++||+||+|+++|
T Consensus 88 yVDRG~~s~Evl~ll~~lk~~~p~~v~llRGNHE~~~~~~~yGf~~e~~~~y~~~~~~l~~~~~~~F~~LPlaaii~~~i 167 (321)
T cd07420 88 FVDRGKRSIEILIILFAFFLVYPNEVHLNRGNHEDHIMNLRYGFTKEVMSKYKLHGKKILRLLEDVFSWLPLATIIDNKI 167 (321)
T ss_pred ccCCCCCcHHHHHHHHHHhhcCCCcEEEecCchhhhhhhhhcChHHHHHHHhCccHHHHHHHHHHHHHhCCceEEEcCCE
Confidence 489999999999999999999999999999999999999999999999999974 689999999999999999999999
Q ss_pred EEeecCcCCCCCCHhhhhhhhcccC-----CCC----------------------CCcccccccCCCCCCCC-cccCCCC
Q 027178 81 LCVHGGLSPDIRTIDQIRVIERNCE-----IPH----------------------EGPFCDLMWSDPEDIET-WAVSPRG 132 (227)
Q Consensus 81 lcvHgGi~~~~~~l~~i~~i~r~~~-----~~~----------------------~~~~~dlLWsDP~~~~~-~~~~~rg 132 (227)
||||||||+ ..++++|++|+|+.. +|. .+++.|+|||||.+..+ |.+++||
T Consensus 168 ~cvHGGi~~-~~~l~~i~~i~r~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlLWSDP~~~~~~~~~~~RG 246 (321)
T cd07420 168 LVVHGGISD-STDLDLLDKIDRHKYVSVLRPPLRKGMEELTGEEEDPSEPLDKTEWRQILDILWSDPKAQKGCKPNTFRG 246 (321)
T ss_pred EEEeCCCCC-ccCHHHHHhhhccccccccCCCccccccccccccccccccccccccchhheeeecCCccCCCCCccCCCC
Confidence 999999997 468999999998531 111 14678999999996555 6778999
Q ss_pred ceeecChhhHHhhhhhcCceEEEeccceeecceeeEecCCeEEEEEcCCCCCccCCCcEEEEEEcCCCceEEEEee
Q 027178 133 AGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMEREVKFFT 208 (227)
Q Consensus 133 ~g~~fg~~~~~~fl~~~~l~~iIRgHe~~~~G~~~~~~~~~~iTifSa~~y~~~~~N~~avl~i~~~~~~~~~~~~ 208 (227)
.|+.||++++++||++|++++||||||++++||++.+ +++|+||||||+||+..+|+||+|.|+++++++|.+|+
T Consensus 247 ~g~~FG~~~~~~Fl~~n~l~~IIR~He~v~~G~~~~~-~~~~iTvFSa~nY~~~~~N~gavl~i~~~~~~~f~~~~ 321 (321)
T cd07420 247 GGCYFGPDVTSKVLQKHGLSLLIRSHECKPEGYEFCH-NNKVITIFSASNYYEEGSNRGAYIKLGPDLTPHFVQYQ 321 (321)
T ss_pred CccccCHHHHHHHHHHCCCcEEEEcChhhhcceEEec-CCeEEEEecCCccCCCCCccEEEEEECCCCceeEEEeC
Confidence 9999999999999999999999999999999999988 99999999999999988999999999999999999884
No 7
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=100.00 E-value=1e-63 Score=442.80 Aligned_cols=207 Identities=42% Similarity=0.883 Sum_probs=201.0
Q ss_pred ccCCCCCcHHHHHHHHHHHHhCCCcEEEeccCCcCccccccCCcHHHHHHHhCChhHHHHHHHHHhhhhhheeecCeEEE
Q 027178 3 QRQITYLCLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLC 82 (227)
Q Consensus 3 ~vDRG~~s~Evl~~L~~LK~~~P~~v~lLRGNHE~~~~~~~~gF~~e~~~~~g~~~~~~~~~~~f~~LPlaaii~~~ilc 82 (227)
.||||++|+||+.+|+++|++||++|+|||||||++.+|..|||++||.++|+...+|+.|+++|++||+||+|+++|+|
T Consensus 96 YVDRG~~slE~i~LL~a~Ki~yp~~~~lLRGNHE~~~in~~yGFydE~~rr~~~~~~w~~F~~~f~~mp~~a~i~~kI~C 175 (331)
T KOG0374|consen 96 YVDRGKQSLETICLLFALKIKYPENVFLLRGNHECASINRIYGFYDECKRRYGEIKLWKAFNDAFNCLPLAALIDGKILC 175 (331)
T ss_pred cccCCccceEEeehhhhhhhhCCceEEEeccccccccccceeeeHHHHHHhcchHHHHHHHHHHHhhCchhheecceEEE
Confidence 48999999999999999999999999999999999999999999999999996679999999999999999999999999
Q ss_pred eecCcCCCCCCHhhhhhhhcccCCCCCCcccccccCCCCC-CCCcccCCCCceeecChhhHHhhhhhcCceEEEecccee
Q 027178 83 VHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPED-IETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLV 161 (227)
Q Consensus 83 vHgGi~~~~~~l~~i~~i~r~~~~~~~~~~~dlLWsDP~~-~~~~~~~~rg~g~~fg~~~~~~fl~~~~l~~iIRgHe~~ 161 (227)
+||||+|.+.++++|+.|.||.+.++.++++|+|||||.. ..+|.+|.||.++.||++++++||+++++++|+||||++
T Consensus 176 mhGGlsp~l~~~~~i~~i~rp~~~~~~gll~DLlWsdp~~~~~g~~~n~Rg~s~~fg~~~v~~f~~~~~ldlivRaHqvv 255 (331)
T KOG0374|consen 176 MHGGLSPHLKSLDQIRAIPRPTDSPDKGLLCDLLWSDPDDDVPGWEENDRGVSFTFGPAVVEDFCKKLDLDLIVRAHQVV 255 (331)
T ss_pred ecCCCChhhcChHHHhhccCCcCCCccceeeeeeecCCCCCCCCcccCCCceeeEecHHHHHHHHHHhCcceEEEcCccc
Confidence 9999999999999999999999999999999999999995 689999999999999999999999999999999999999
Q ss_pred ecceeeEecCCeEEEEEcCCCCCccCCCcEEEEEEcCCCceEEEEeecc
Q 027178 162 QEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMEREVKFFTET 210 (227)
Q Consensus 162 ~~G~~~~~~~~~~iTifSa~~y~~~~~N~~avl~i~~~~~~~~~~~~~~ 210 (227)
++||++ |++++++||||||+||+.+.|.||+|.+++++.++|..+.|.
T Consensus 256 ~dGyef-fa~r~lvTIFSAP~Ycg~~~n~gavm~Vd~~l~~sf~~l~p~ 303 (331)
T KOG0374|consen 256 EDGYEF-FAGRKLVTIFSAPNYCGEFDNAGAVMRVDKNLKCSFVILRPE 303 (331)
T ss_pred cccceE-ecCceEEEEecCchhccccCCceEEEEECCCCeEEEEEeccc
Confidence 999998 559999999999999999999999999999999999999995
No 8
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=100.00 E-value=4e-62 Score=431.95 Aligned_cols=209 Identities=36% Similarity=0.653 Sum_probs=200.4
Q ss_pred ccCCCCCcHHHHHHHHHHHHhCCCcEEEeccCCcCccccccCCcHHHHHHHhCChhHHHHHHHHHhhhhhheeecCeEEE
Q 027178 3 QRQITYLCLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLC 82 (227)
Q Consensus 3 ~vDRG~~s~Evl~~L~~LK~~~P~~v~lLRGNHE~~~~~~~~gF~~e~~~~~g~~~~~~~~~~~f~~LPlaaii~~~ilc 82 (227)
.||||++|+||+.+|++||+.+|++|++||||||.+.++..|||..|+..+| ..++|+.++++|++||+||++++++||
T Consensus 97 yVDRG~~S~Evl~ll~~lki~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~k~-~~~l~~~~~~~f~~LPlaaii~~~~~~ 175 (316)
T cd07417 97 FVDRGSFSVEVILTLFAFKLLYPNHFHLNRGNHETDNMNKMYGFEGEVKAKY-NEQMFDLFSEVFNWLPLAHLINGKVLV 175 (316)
T ss_pred EecCCCChHHHHHHHHHhhhccCCceEEEeeccchHHHHHHhhhcchhhhcc-cHHHHHHHHHHHHhchHhheeCCeEEE
Confidence 5899999999999999999999999999999999999999999999999999 568999999999999999999999999
Q ss_pred eecCc-CCCCCCHhhhhhhhcccCCCCCCcccccccCCCCCCCCcccCCCCceeecChhhHHhhhhhcCceEEEecccee
Q 027178 83 VHGGL-SPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLV 161 (227)
Q Consensus 83 vHgGi-~~~~~~l~~i~~i~r~~~~~~~~~~~dlLWsDP~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~l~~iIRgHe~~ 161 (227)
||||| ++...+++++++|+|+.+.+.++++.|+|||||.+..+|.+|+||.|+.||++++++||++|++++||||||++
T Consensus 176 vHgGi~~~~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~s~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~ 255 (316)
T cd07417 176 VHGGLFSDDGVTLDDIRKIDRFRQPPDSGLMCELLWSDPQPQPGRSPSKRGVGCQFGPDVTKRFLEENNLEYIIRSHEVK 255 (316)
T ss_pred EccccccCCCccHHHhhcccCCCCCCccccceeeeecCCCCCCCCCccCCCCceEeCHHHHHHHHHHcCCcEEEECCccc
Confidence 99999 55678999999999999888899999999999998889999999999999999999999999999999999999
Q ss_pred ecceeeEecCCeEEEEEcCCCCCccCCCcEEEEEEcC-CCceEEEEeeccccc
Q 027178 162 QEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNE-NMEREVKFFTETEEN 213 (227)
Q Consensus 162 ~~G~~~~~~~~~~iTifSa~~y~~~~~N~~avl~i~~-~~~~~~~~~~~~~~~ 213 (227)
++||++.+ +++|+||||||+||+..+|+||+|.|++ +++++|++|++.|+.
T Consensus 256 ~~G~~~~~-~~~~~TvfSa~~Y~~~~~N~ga~~~i~~~~~~~~~~~~~~~~~~ 307 (316)
T cd07417 256 DEGYEVEH-DGKCITVFSAPNYCDQMGNKGAFIRITGSDLKPKFTQFEAVPHP 307 (316)
T ss_pred ceeEEEec-CCeEEEEeCCccccCCCCcceEEEEEeCCCceeeeEeccCCCCC
Confidence 99999988 9999999999999999999999999999 899999999999876
No 9
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=100.00 E-value=6.1e-62 Score=426.93 Aligned_cols=205 Identities=36% Similarity=0.779 Sum_probs=197.6
Q ss_pred ccCCCCCcHHHHHHHHHHHHhCCCcEEEeccCCcCccccccCCcHHHHHHHhCChhHHHHHHHHHhhhhhheeecCeEEE
Q 027178 3 QRQITYLCLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLC 82 (227)
Q Consensus 3 ~vDRG~~s~Evl~~L~~LK~~~P~~v~lLRGNHE~~~~~~~~gF~~e~~~~~g~~~~~~~~~~~f~~LPlaaii~~~ilc 82 (227)
.||||++|+||+.+|+++|+.+|.+|++||||||.+.++..|||.+|+..+| ...+|+.++++|++||+||++++++||
T Consensus 88 yVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~y-~~~l~~~~~~~f~~lPlaaii~~~il~ 166 (294)
T PTZ00244 88 YVDRGKHSVETITLQFCYKIVYPENFFLLRGNHECASINKMYGFFDDVKRRY-NIKLFKAFTDVFNTMPVCCVISEKIIC 166 (294)
T ss_pred EecCCCCHHHHHHHHHHHhhccCCeEEEEecccchHhHhhccChHHHHHHHh-hHHHHHHHHHHHHhCchheEecCeeEE
Confidence 5899999999999999999999999999999999999999999999999999 578999999999999999999999999
Q ss_pred eecCcCCCCCCHhhhhhhhcccCCCCCCcccccccCCCCC-CCCcccCCCCceeecChhhHHhhhhhcCceEEEecccee
Q 027178 83 VHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPED-IETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLV 161 (227)
Q Consensus 83 vHgGi~~~~~~l~~i~~i~r~~~~~~~~~~~dlLWsDP~~-~~~~~~~~rg~g~~fg~~~~~~fl~~~~l~~iIRgHe~~ 161 (227)
|||||+|.+.++++++.|+||.+.+.++++.|+|||||.+ ..+|.+++||.|++||++++++||++|++++||||||++
T Consensus 167 vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~Hq~~ 246 (294)
T PTZ00244 167 MHGGLSPDLTSLASVNEIERPCDVPDRGILCDLLWADPEDEVRGFLESDRGVSYLFGEDIVNDFLDMVDMDLIVRAHQVM 246 (294)
T ss_pred EcCCCCchhhHHHHhhhhccccCCCccchhheeeecCcccccCCCCcCCCCCccccCHHHHHHHHHHcCCcEEEEcCccc
Confidence 9999999999999999999999999999999999999985 679999999999999999999999999999999999999
Q ss_pred ecceeeEecCCeEEEEEcCCCCCccCCCcEEEEEEcCCCceEEEEeec
Q 027178 162 QEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMEREVKFFTE 209 (227)
Q Consensus 162 ~~G~~~~~~~~~~iTifSa~~y~~~~~N~~avl~i~~~~~~~~~~~~~ 209 (227)
++||++.+ +++|+||||||+||+..+|+||+|.|+++.+++|.+|.+
T Consensus 247 ~~G~~~~~-~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~f~~~~~ 293 (294)
T PTZ00244 247 ERGYGFFA-SRQLVTVFSAPNYCGEFDNDAAVMNIDDKLQCSFLIIPA 293 (294)
T ss_pred cCceEEcC-CCeEEEEeCCccccCCCCceEEEEEECCCCcEeEEEeec
Confidence 99999977 999999999999999889999999999999999998865
No 10
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=100.00 E-value=7.8e-62 Score=426.48 Aligned_cols=206 Identities=41% Similarity=0.877 Sum_probs=198.5
Q ss_pred ccCCCCCcHHHHHHHHHHHHhCCCcEEEeccCCcCccccccCCcHHHHHHHhCChhHHHHHHHHHhhhhhheeecCeEEE
Q 027178 3 QRQITYLCLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLC 82 (227)
Q Consensus 3 ~vDRG~~s~Evl~~L~~LK~~~P~~v~lLRGNHE~~~~~~~~gF~~e~~~~~g~~~~~~~~~~~f~~LPlaaii~~~ilc 82 (227)
.||||++|+||+.+|+++|+.+|.+|++||||||.+.++..|||.+|+..+| ...+|+.++++|++||+||++++++||
T Consensus 86 yVDRG~~s~e~i~ll~~lk~~~p~~i~llrGNHE~~~~~~~~gf~~e~~~~y-~~~l~~~~~~~f~~lPlaa~i~~~i~c 164 (293)
T cd07414 86 YVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPVAAIIDEKIFC 164 (293)
T ss_pred EecCCCCcHHHHHHHHHhhhhCCCcEEEEecccchhhHhhhcchhhHHHHhh-hHHHHHHHHHHHHHhHHHHhhCCcEEE
Confidence 5899999999999999999999999999999999999999999999999999 578999999999999999999999999
Q ss_pred eecCcCCCCCCHhhhhhhhcccCCCCCCcccccccCCCCC-CCCcccCCCCceeecChhhHHhhhhhcCceEEEecccee
Q 027178 83 VHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPED-IETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLV 161 (227)
Q Consensus 83 vHgGi~~~~~~l~~i~~i~r~~~~~~~~~~~dlLWsDP~~-~~~~~~~~rg~g~~fg~~~~~~fl~~~~l~~iIRgHe~~ 161 (227)
||||++|.+.++++|++++||.+.+.++++.|+|||||.+ ..+|.+|+||.|+.||++++++||++||+++||||||++
T Consensus 165 vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~ 244 (293)
T cd07414 165 MHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGKDVVAKFLNKHDLDLICRAHQVV 244 (293)
T ss_pred EccCCCcccCcHHHHhcccCCCCCCchhhHhhhhccCcccccCCCccCCCCcceecCHHHHHHHHHHcCCeEEEECCccc
Confidence 9999999999999999999999999999999999999984 678999999999999999999999999999999999999
Q ss_pred ecceeeEecCCeEEEEEcCCCCCccCCCcEEEEEEcCCCceEEEEeecc
Q 027178 162 QEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMEREVKFFTET 210 (227)
Q Consensus 162 ~~G~~~~~~~~~~iTifSa~~y~~~~~N~~avl~i~~~~~~~~~~~~~~ 210 (227)
++||++.+ +++|+||||||+||+..+|+||+|.|+++++++|.+|+|.
T Consensus 245 ~~G~~~~~-~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~~~~~~~~ 292 (293)
T cd07414 245 EDGYEFFA-KRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA 292 (293)
T ss_pred cCeEEEeC-CCcEEEEecCCcccCCCCceEEEEEECCCCcEEEEEecCC
Confidence 99999977 9999999999999998999999999999999999999864
No 11
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-63 Score=415.38 Aligned_cols=223 Identities=52% Similarity=1.006 Sum_probs=219.8
Q ss_pred cCCCCCcHHHHHHHHHHHHhCCCcEEEeccCCcCccccccCCcHHHHHHHhCChhHHHHHHHHHhhhhhheeecCeEEEe
Q 027178 4 RQITYLCLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCV 83 (227)
Q Consensus 4 vDRG~~s~Evl~~L~~LK~~~P~~v~lLRGNHE~~~~~~~~gF~~e~~~~~g~~~~~~~~~~~f~~LPlaaii~~~ilcv 83 (227)
||||++|.|++.+|+++|++||++|.+||||||.+.++..|||++||.+|||+..+|..|.+.|+++|+.|+|+++|||+
T Consensus 97 vdrGy~SvetVS~lva~Kvry~~rvtilrGNHEsrqitqvygfydeclRkyg~anvw~~Ftdlfdy~P~tali~~~ifc~ 176 (319)
T KOG0371|consen 97 VDRGYYSVETVSLLVALKVRYPDRVTILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESKIFCL 176 (319)
T ss_pred cccccchHHHHHHHHHhhccccceeEEecCchHHHHHHHHHhhHHHHHhhcccccchHHhhhhhhccchHhhhccceeec
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCcCCCCCCHhhhhhhhcccCCCCCCcccccccCCCCCCCCcccCCCCceeecChhhHHhhhhhcCceEEEeccceeec
Q 027178 84 HGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQE 163 (227)
Q Consensus 84 HgGi~~~~~~l~~i~~i~r~~~~~~~~~~~dlLWsDP~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~l~~iIRgHe~~~~ 163 (227)
|||++|.+.+++.++.+.|-+++|.++.++|||||||.+..+|..+|||.|+-||.+..++|-.+||+++|-|+||.+.+
T Consensus 177 HGgLspsi~tld~~r~~dr~~evphegpmcDlLwsdpddr~gwg~sprgag~tfg~di~~~fn~~n~lslisRahqlvm~ 256 (319)
T KOG0371|consen 177 HGGLSPSIDTLDLIRLLDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHKNGLSLISRAHQLVME 256 (319)
T ss_pred cCCcCcccchHHHHHHHHHhhcccCCCChhheeccCcccCCCCCCCCCCCCcccchhhHHHhhccCCchHhHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeEecCCeEEEEEcCCCCCccCCCcEEEEEEcCCCceEEEEeecccccCCCCCCCCCCCCCC
Q 027178 164 GLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMEREVKFFTETEENNQMRGPRTGVPYFL 227 (227)
Q Consensus 164 G~~~~~~~~~~iTifSa~~y~~~~~N~~avl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (227)
||.+.+ ...++|||||||||++++|.||+|+++++....|.||+|+|...+..++|++|||||
T Consensus 257 g~nW~~-~~~~vtiFSapnycYrcgn~a~i~e~d~~~~~~f~q~~psp~k~e~~vtr~tpDYfL 319 (319)
T KOG0371|consen 257 GYNWYH-LWNVVTIFSAPNYCYRCGNQAAIMERDDTKNYDFLQFDPSPRKVEPDVTRKTPDYFL 319 (319)
T ss_pred ccceee-ecceeEEccCCchhhccccHHHHhhhhhccCcceEEecCCccccccccccCCCCCcC
Confidence 999998 888889999999999999999999999999999999999999999999999999997
No 12
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=100.00 E-value=6.2e-61 Score=417.19 Aligned_cols=206 Identities=44% Similarity=0.843 Sum_probs=198.6
Q ss_pred ccCCCCCcHHHHHHHHHHHHhCCCcEEEeccCCcCccccccCCcHHHHHHHhCChhHHHHHHHHHhhhhhheeecCeEEE
Q 027178 3 QRQITYLCLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLC 82 (227)
Q Consensus 3 ~vDRG~~s~Evl~~L~~LK~~~P~~v~lLRGNHE~~~~~~~~gF~~e~~~~~g~~~~~~~~~~~f~~LPlaaii~~~ilc 82 (227)
.||||++|+||+.+|++||+.+|.+|++||||||.+.++..|||.+|+..+| ..++|+.++++|++||+||++++++||
T Consensus 64 ~VDrG~~s~e~l~~l~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~-~~~l~~~~~~~f~~LPl~aii~~~~~~ 142 (271)
T smart00156 64 YVDRGPFSIEVILLLFALKILYPNRVVLLRGNHESRSMNEIYGFYDECKRKY-GEEIYEKFQEAFSWLPLAALIDNKILC 142 (271)
T ss_pred ccCCCCChHHHHHHHHHHHhcCCCCEEEEeccccHHHHHHhccchhhhhhhc-CHHHHHHHHHHHhhChhheEEcCeEEE
Confidence 5899999999999999999999999999999999999999999999999999 478999999999999999999999999
Q ss_pred eecCcCCCCCCHhhhhhhhcccCCCCCCcccccccCCCC-CCCCcccCCCCceeecChhhHHhhhhhcCceEEEecccee
Q 027178 83 VHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPE-DIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLV 161 (227)
Q Consensus 83 vHgGi~~~~~~l~~i~~i~r~~~~~~~~~~~dlLWsDP~-~~~~~~~~~rg~g~~fg~~~~~~fl~~~~l~~iIRgHe~~ 161 (227)
|||||+|.+.++++|++|+||.+.+.++++.|+|||||. ...+|.+|+||.|+.||++++++||++|++++||||||++
T Consensus 143 vHgGi~~~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~ 222 (271)
T smart00156 143 MHGGLSPDLTTLDDIRKLKRPQEPPDEGLLIDLLWSDPDQPVDGFQPSIRGASYYFGPDAVDEFLKKNNLKLIIRAHQVV 222 (271)
T ss_pred EecCCCCccCCHHHHhcccCCCCCCchhhhhheeecCCCcccCCCccCCCCCccccCHHHHHHHHHHCCCeEEEecCccc
Confidence 999999999999999999999998999999999999997 5778999999999999999999999999999999999999
Q ss_pred ecceeeEecCCeEEEEEcCCCCCccCCCcEEEEEEcCCCceEEEEeecc
Q 027178 162 QEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMEREVKFFTET 210 (227)
Q Consensus 162 ~~G~~~~~~~~~~iTifSa~~y~~~~~N~~avl~i~~~~~~~~~~~~~~ 210 (227)
++||+..+ +++|+||||||+||+..+|+||+|.|++++++++.+|+|.
T Consensus 223 ~~G~~~~~-~~~~~TvfSa~~y~~~~~n~~a~~~i~~~~~~~~~~~~~~ 270 (271)
T smart00156 223 DDGYEFFH-DRKLVTIFSAPNYCGRFGNKAAVLKVDKDLKLSFEQFKPG 270 (271)
T ss_pred CCcEEEec-CCcEEEEECCcccccCCCceEEEEEECCCCcEEEEEecCC
Confidence 99999988 9999999999999998899999999999999999999864
No 13
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=100.00 E-value=2.4e-60 Score=419.34 Aligned_cols=209 Identities=37% Similarity=0.681 Sum_probs=196.2
Q ss_pred ccCCCCCcHHHHHHHHHHHHhCCCcEEEeccCCcCccccccCCcHHHHHHHhCChhHHHHHHHHHhhhhhheeecCeEEE
Q 027178 3 QRQITYLCLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLC 82 (227)
Q Consensus 3 ~vDRG~~s~Evl~~L~~LK~~~P~~v~lLRGNHE~~~~~~~~gF~~e~~~~~g~~~~~~~~~~~f~~LPlaaii~~~ilc 82 (227)
.||||++|+||+.+|++||+.+|++|++||||||.+.++..|||..|+..+| ..++|+.++++|++||++|++++++||
T Consensus 79 yVDRG~~s~Evi~lL~~lki~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~y-~~~l~~~~~~~f~~LPlaaii~~~i~~ 157 (305)
T cd07416 79 YVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKY-SERVYDACMEAFDCLPLAALMNQQFLC 157 (305)
T ss_pred ccCCCCChHHHHHHHHHHHhhcCCCEEEEeCCCcHHHHHHhhCchhHHHHhc-cHHHHHHHHHHHhhccceeEEcCCEEE
Confidence 5899999999999999999999999999999999999999999999999999 678999999999999999999999999
Q ss_pred eecCcCCCCCCHhhhhhhhcccCCCCCCcccccccCCCCCCC-------Cccc-CCCCceeecChhhHHhhhhhcCceEE
Q 027178 83 VHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIE-------TWAV-SPRGAGWLFGSRVTSEFNHINNLDLV 154 (227)
Q Consensus 83 vHgGi~~~~~~l~~i~~i~r~~~~~~~~~~~dlLWsDP~~~~-------~~~~-~~rg~g~~fg~~~~~~fl~~~~l~~i 154 (227)
|||||+|.+.++++|++|+||.+.|.++++.|+|||||.+.. +|.+ ++||.|+.||++++++||++|++++|
T Consensus 158 vHGGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~~~Rg~g~~fG~~~~~~Fl~~n~l~~i 237 (305)
T cd07416 158 VHGGLSPELKTLDDIRKLDRFREPPAFGPMCDLLWSDPLEDFGNEKTQEHFVHNTVRGCSYFYSYRAVCEFLQKNNLLSI 237 (305)
T ss_pred EcCCCCcccccHHHhcccCCCCCCCCCCcceeeeecCcccccccccccccccccCCCCCceecCHHHHHHHHHHcCCeEE
Confidence 999999999999999999999998999999999999998422 4665 49999999999999999999999999
Q ss_pred EeccceeecceeeEecCC------eEEEEEcCCCCCccCCCcEEEEEEcCCCceEEEEeecccccC
Q 027178 155 CRAHQLVQEGLKYMFQDK------GLVTVWSAPNYCYRCGNVASILSFNENMEREVKFFTETEENN 214 (227)
Q Consensus 155 IRgHe~~~~G~~~~~~~~------~~iTifSa~~y~~~~~N~~avl~i~~~~~~~~~~~~~~~~~~ 214 (227)
|||||++++||++.+ ++ +|+||||||+||+..+|+||+|.|+++ .++|.+|.|+|+..
T Consensus 238 iR~He~~~~G~~~~~-~~~~~~~~~~iTvFSa~~Y~~~~~N~~a~l~i~~~-~~~~~~~~~~~~~~ 301 (305)
T cd07416 238 IRAHEAQDAGYRMYR-KSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENN-VMNIRQFNCSPHPY 301 (305)
T ss_pred EEeccccccceEEec-CCCcCCCCcEEEEeCCccccCCCCceEEEEEEcCC-cceEEEecCCCCCC
Confidence 999999999999977 65 999999999999998999999999987 47999999999764
No 14
>KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only]
Probab=100.00 E-value=6e-62 Score=424.50 Aligned_cols=211 Identities=37% Similarity=0.662 Sum_probs=199.0
Q ss_pred cCCCCCcHHHHHHHHHHHHhCCCcEEEeccCCcCccccccCCcHHHHHHHhCChhHHHHHHHHHhhhhhheeecCeEEEe
Q 027178 4 RQITYLCLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCV 83 (227)
Q Consensus 4 vDRG~~s~Evl~~L~~LK~~~P~~v~lLRGNHE~~~~~~~~gF~~e~~~~~g~~~~~~~~~~~f~~LPlaaii~~~ilcv 83 (227)
||||.+|+|||++|++||+.||+.++|||||||++.++..+.|++||..|| ++.+|+++++.|+.|||||++++++|||
T Consensus 125 VDRGyFSiECvlYLwsLKi~yp~tl~lLRGNHECrHLT~YFTFKqEc~iKY-se~vYdaCmesFd~LPLAAlmNqQflCV 203 (517)
T KOG0375|consen 125 VDRGYFSIECVLYLWSLKINYPKTLFLLRGNHECRHLTEYFTFKQECKIKY-SERVYDACMESFDCLPLAALMNQQFLCV 203 (517)
T ss_pred cccceeeeehHHHHHHHhcCCCCeEEEecCCcchhhhHhHhhHHHHHhHhc-cHHHHHHHHHHhccchHHHHhcCceEEe
Confidence 899999999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred ecCcCCCCCCHhhhhhhhcccCCCCCCcccccccCCCCCC-------CCc-ccCCCCceeecChhhHHhhhhhcCceEEE
Q 027178 84 HGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDI-------ETW-AVSPRGAGWLFGSRVTSEFNHINNLDLVC 155 (227)
Q Consensus 84 HgGi~~~~~~l~~i~~i~r~~~~~~~~~~~dlLWsDP~~~-------~~~-~~~~rg~g~~fg~~~~~~fl~~~~l~~iI 155 (227)
|||+||.+.++++|++|+|+.++|.-++++|+|||||.+. +-| .++.||++|.|+..|+++||+.||+-.||
T Consensus 204 HGGlSPEi~tl~DIr~l~RF~EpPa~GpmCDLLWsDPlEdfgnek~~e~f~hNsvRGCSyfysy~A~C~FLq~nnLLSIi 283 (517)
T KOG0375|consen 204 HGGLSPEIHTLDDIRKLDRFKEPPAFGPMCDLLWSDPLEDFGNEKTSEHFTHNSVRGCSYFYSYPAVCEFLQNNNLLSII 283 (517)
T ss_pred cCCCCcccccHHHHHhhhhccCCCccCcchhhhccChhhhccccccccccccCccccccceechHHHHHHHHhCCchhhh
Confidence 9999999999999999999999999999999999999842 223 35689999999999999999999999999
Q ss_pred eccceeecceeeEe-----cCCeEEEEEcCCCCCccCCCcEEEEEEcCCCceEEEEeecccccCCC
Q 027178 156 RAHQLVQEGLKYMF-----QDKGLVTVWSAPNYCYRCGNVASILSFNENMEREVKFFTETEENNQM 216 (227)
Q Consensus 156 RgHe~~~~G~~~~~-----~~~~~iTifSa~~y~~~~~N~~avl~i~~~~~~~~~~~~~~~~~~~~ 216 (227)
|+||.++.||++.- +-..+|||||||||.+.++|+||||+.. +..+.++||.++||..|.
T Consensus 284 RAHEAQDaGYRMYrksqttGFPSLiTiFSAPNYLDvYnNKAAvLKYE-nNVMNIRQFncSPHPYWL 348 (517)
T KOG0375|consen 284 RAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYE-NNVMNIRQFNCSPHPYWL 348 (517)
T ss_pred hhhhhhhhhhhhhhcccccCCchheeeecCCchhhhhccHHHHhhhh-cccceeeccCCCCCCccc
Confidence 99999999999843 3467999999999999999999999997 678999999999999773
No 15
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=100.00 E-value=1.2e-57 Score=403.52 Aligned_cols=206 Identities=33% Similarity=0.640 Sum_probs=193.2
Q ss_pred ccCCCCCcHHHHHHHHHHHHhCCCcEEEeccCCcCccccccCCcHHHHHHHhCC-----hhHHHHHHHHHhhhhhheeec
Q 027178 3 QRQITYLCLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGN-----ANAWRYCTDVFDYLTLSAIID 77 (227)
Q Consensus 3 ~vDRG~~s~Evl~~L~~LK~~~P~~v~lLRGNHE~~~~~~~~gF~~e~~~~~g~-----~~~~~~~~~~f~~LPlaaii~ 77 (227)
.||||++|+||+.+|++||+.+|++|++||||||.+.++..|||..||..+|+. ..+|+.++++|++||++|+++
T Consensus 92 yVDRGp~s~evl~ll~~lk~~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~~~~~~~~l~~~~~~~f~~LPl~avi~ 171 (311)
T cd07419 92 YVDRGSNSLETICLLLALKVKYPNQIHLIRGNHEDRDINALFGFREECKERLGEDPNDGDSVWRRINRLFEWLPLAAIIE 171 (311)
T ss_pred ccCCCCChHHHHHHHHHhhhcCCCcEEEeccccchHHHHHHhcccHHHHHhcCccchhhHHHHHHHHHHHHhCchhheec
Confidence 589999999999999999999999999999999999999999999999999975 369999999999999999999
Q ss_pred CeEEEeecCcCCCCCCHhhhhhhhccc-CCCCCCcccccccCCCCCC---CCcccCC---CCce--eecChhhHHhhhhh
Q 027178 78 GTVLCVHGGLSPDIRTIDQIRVIERNC-EIPHEGPFCDLMWSDPEDI---ETWAVSP---RGAG--WLFGSRVTSEFNHI 148 (227)
Q Consensus 78 ~~ilcvHgGi~~~~~~l~~i~~i~r~~-~~~~~~~~~dlLWsDP~~~---~~~~~~~---rg~g--~~fg~~~~~~fl~~ 148 (227)
+++|||||||+|.+.++++|+.|.||. ..+.++++.|+|||||.+. .++.+++ ||.| +.||++++++||++
T Consensus 172 ~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~rg~g~~~~fg~~~~~~Fl~~ 251 (311)
T cd07419 172 DKILCMHGGIGRSINHVSEIEDLKRPLTMEFGEQVVMDLLWSDPTENDSVLGLRPNAIDPRGPGLIVKFGPDRVHRFLEE 251 (311)
T ss_pred ccEEEEccCCCCCCCcHHHHhhcCCCCCCCCCCcceeeeeccCccccccccccccCCCCCCCCCcceeECHHHHHHHHHH
Confidence 999999999999999999999999997 4456788999999999953 4676666 9999 79999999999999
Q ss_pred cCceEEEeccceeecceeeEecCCeEEEEEcCCCCCccCCCcEEEEEEcCCCceEEEEeec
Q 027178 149 NNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMEREVKFFTE 209 (227)
Q Consensus 149 ~~l~~iIRgHe~~~~G~~~~~~~~~~iTifSa~~y~~~~~N~~avl~i~~~~~~~~~~~~~ 209 (227)
||+++||||||++++||++.+ +++|+||||||+||+..+|.||+|.|+++.++++.+++|
T Consensus 252 n~l~~iiRgHe~~~~G~~~~~-~~~~iTvfSa~~y~~~~~n~~ai~~i~~~~~~~~~~~~~ 311 (311)
T cd07419 252 NDLQMIIRAHECVMDGFERFA-QGKLITLFSATNYCGTAGNAGAILVLGRDLTIIPKLIHP 311 (311)
T ss_pred CCCeEEEEechhhhCCeEEeC-CCeEEEEecCCcccCCCCceEEEEEECCCCcEeEEEeCC
Confidence 999999999999999999987 999999999999999889999999999999999999886
No 16
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=100.00 E-value=1.3e-57 Score=408.93 Aligned_cols=207 Identities=35% Similarity=0.560 Sum_probs=188.9
Q ss_pred ccCCCCCcHHHHHHHHHHHHhCCCcEEEeccCCcCccccccCCcHHHHHHHhCC--hhHHHHHHHHHhhhhhheeecCeE
Q 027178 3 QRQITYLCLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGN--ANAWRYCTDVFDYLTLSAIIDGTV 80 (227)
Q Consensus 3 ~vDRG~~s~Evl~~L~~LK~~~P~~v~lLRGNHE~~~~~~~~gF~~e~~~~~g~--~~~~~~~~~~f~~LPlaaii~~~i 80 (227)
.||||++|+||+.+|++||+.+|++|++||||||...++..|||.+|+..+|+. ..+|+.++++|++||+||++++++
T Consensus 103 yVDRGp~SlEvl~lL~~lki~~p~~v~lLRGNHE~~~i~~~~Gf~~E~~~~y~~~~~~l~~~~~~~f~~LPlaavI~~~i 182 (377)
T cd07418 103 YVDRGAWGLETFLLLLSWKVLLPDRVYLLRGNHESKFCTSMYGFEQEVLTKYGDKGKHVYRKCLGCFEGLPLASIIAGRV 182 (377)
T ss_pred ccCCCCChHHHHHHHHHHhhccCCeEEEEeeecccccchhhcccchhhhhhcCchHHHHHHHHHHHHHhCCcEEEECCCE
Confidence 489999999999999999999999999999999999999999999999999976 479999999999999999999999
Q ss_pred EEeecCcC---------------------------CCCCCHhhhhhhhcc-cCCCCCC---cccccccCCCCCCCCcccC
Q 027178 81 LCVHGGLS---------------------------PDIRTIDQIRVIERN-CEIPHEG---PFCDLMWSDPEDIETWAVS 129 (227)
Q Consensus 81 lcvHgGi~---------------------------~~~~~l~~i~~i~r~-~~~~~~~---~~~dlLWsDP~~~~~~~~~ 129 (227)
|||||||+ +.+.++++|++++|| .+++.++ ++.|+|||||.+..+|.++
T Consensus 183 ~cvHGGI~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~r~~~~~~~~~~~~i~~dlLWSDP~~~~g~~~~ 262 (377)
T cd07418 183 YTAHGGLFRSPSLPKRKKQKGKNRRVLLLEPESESLKLGTLDDLMKARRSVLDPPGEGSNLIPGDVLWSDPSLTPGLSPN 262 (377)
T ss_pred EEECCCcCCcccccccccccccccccccccccccCCCCCCHHHHhhCCCCCCCCCCCCccccceeeEeeCCccCCCCCcc
Confidence 99999994 456789999999997 4555554 4789999999987777665
Q ss_pred -CCCceeecChhhHHhhhhhcCceEEEeccce------------eecceeeEecC---CeEEEEEcCCCCC------ccC
Q 027178 130 -PRGAGWLFGSRVTSEFNHINNLDLVCRAHQL------------VQEGLKYMFQD---KGLVTVWSAPNYC------YRC 187 (227)
Q Consensus 130 -~rg~g~~fg~~~~~~fl~~~~l~~iIRgHe~------------~~~G~~~~~~~---~~~iTifSa~~y~------~~~ 187 (227)
+||.|++||++++++||++|++++||||||+ |++||++.+ + ++|+||||||||| +.+
T Consensus 263 ~~RG~g~~FG~~~~~~FL~~n~l~~IIRsHe~~~~~~~~~~~~~v~~Gy~~~~-~~~~~~liTvFSa~nY~~~~~~~~~~ 341 (377)
T cd07418 263 KQRGIGLLWGPDCTEEFLEKNNLKLIIRSHEGPDAREKRPGLAGMNKGYTVDH-DVESGKLITLFSAPDYPQFQATEERY 341 (377)
T ss_pred CCCCCccccCHHHHHHHHHHcCCcEEEECCCCcccccccccchhhhCceEEec-cCCCCcEEEEecCCcccccccccccc
Confidence 7999999999999999999999999999996 689999977 6 9999999999999 578
Q ss_pred CCcEEEEEEcCC--CceEEEEeecc
Q 027178 188 GNVASILSFNEN--MEREVKFFTET 210 (227)
Q Consensus 188 ~N~~avl~i~~~--~~~~~~~~~~~ 210 (227)
+|+||++.++.+ ..++|.+|+++
T Consensus 342 ~N~ga~~~~~~~~~~~~~~~~~~~~ 366 (377)
T cd07418 342 NNKGAYIILQPPDFSDPQFHTFEAV 366 (377)
T ss_pred CcceEEEEEecCCCCCccceEeecc
Confidence 999999999765 47999999998
No 17
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-49 Score=352.59 Aligned_cols=209 Identities=30% Similarity=0.523 Sum_probs=188.6
Q ss_pred ccCCCCCcHHHHHHHHHHHHhCCCcEEEeccCCcCccccccCCcHHHHHHHhCC--hhHHHHHHHHHhhhhhheeecCeE
Q 027178 3 QRQITYLCLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGN--ANAWRYCTDVFDYLTLSAIIDGTV 80 (227)
Q Consensus 3 ~vDRG~~s~Evl~~L~~LK~~~P~~v~lLRGNHE~~~~~~~~gF~~e~~~~~g~--~~~~~~~~~~f~~LPlaaii~~~i 80 (227)
-||||.+|+||+++|+++-+.||+.|||.|||||...||-.|||.+|+..||.. ..+...+.++|+|||+|.+|+++|
T Consensus 202 FVDRGk~siEvLmiL~a~~lv~P~~~~LNRGNHED~mmNlRYGF~kEv~~KYk~~~k~Ilr~leevy~WLPi~tiid~~i 281 (631)
T KOG0377|consen 202 FVDRGKRSIEVLMILFALYLVYPNAVHLNRGNHEDHMMNLRYGFIKEVESKYKRHGKRILRFLEEVYRWLPIGTIIDSRI 281 (631)
T ss_pred hhhccccchhhHHHHHHHHhcCchhhhccCCchHHHHHHHHHhHHHHHHHHhhhcccHHHHHHHHHHHhcchhhhcccce
Confidence 389999999999999999999999999999999999999999999999999964 689999999999999999999999
Q ss_pred EEeecCcCCCCCCHhhhhhhhcccC-----CC-----------------CCCcccccccCCCCCCCC-cccCCCCceeec
Q 027178 81 LCVHGGLSPDIRTIDQIRVIERNCE-----IP-----------------HEGPFCDLMWSDPEDIET-WAVSPRGAGWLF 137 (227)
Q Consensus 81 lcvHgGi~~~~~~l~~i~~i~r~~~-----~~-----------------~~~~~~dlLWsDP~~~~~-~~~~~rg~g~~f 137 (227)
|.||||||.. ++++-+.+|.|..- +| +.+.+.|+|||||....| |.+.-||.|.+|
T Consensus 282 lvvHGGiSd~-Tdl~ll~kIeR~k~~Svlrpp~ek~~d~e~~s~~vg~dEW~Qi~DImWSDP~~~~GC~pNt~RGgG~yF 360 (631)
T KOG0377|consen 282 LVVHGGISDS-TDLDLLDKIERGKYVSVLRPPTEKGRDGEKLSKAVGVDEWQQIFDIMWSDPQATMGCVPNTLRGGGCYF 360 (631)
T ss_pred EEEecCcccc-hhHHHHhhhhccceeEEecCCcccCccCCchhhhcChHHHHHHHHHHhcCcccccCCCcccccCCccee
Confidence 9999999865 57888888876531 11 123467999999996555 555689999999
Q ss_pred ChhhHHhhhhhcCceEEEeccceeecceeeEecCCeEEEEEcCCCCCccCCCcEEEEEEcCCCceEEEEeeccccc
Q 027178 138 GSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMEREVKFFTETEEN 213 (227)
Q Consensus 138 g~~~~~~fl~~~~l~~iIRgHe~~~~G~~~~~~~~~~iTifSa~~y~~~~~N~~avl~i~~~~~~~~~~~~~~~~~ 213 (227)
|++++.+||++.+++++||+|||.++||++.+ +++|+|||||+||.....|+||.+++.+...+.|+||.++...
T Consensus 361 GpDvT~~~Lqk~~l~~liRSHECKpeGyEf~H-d~kvlTiFSASNYYe~GSNrGAYikl~~~~~PhfvQY~a~k~t 435 (631)
T KOG0377|consen 361 GPDVTDNFLQKHRLSYLIRSHECKPEGYEFCH-DNKVLTIFSASNYYEIGSNRGAYIKLGNQLTPHFVQYQAAKQT 435 (631)
T ss_pred CchHHHHHHHHhCceeeeeecccCCCcceeee-CCeEEEEEeccchheecCCCceEEEeCCCCCchHHHHHhhhhh
Confidence 99999999999999999999999999999999 9999999999999887889999999999999999999987654
No 18
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=100.00 E-value=8.2e-48 Score=347.86 Aligned_cols=209 Identities=35% Similarity=0.628 Sum_probs=200.6
Q ss_pred ccCCCCCcHHHHHHHHHHHHhCCCcEEEeccCCcCccccccCCcHHHHHHHhCChhHHHHHHHHHhhhhhheeecCeEEE
Q 027178 3 QRQITYLCLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLC 82 (227)
Q Consensus 3 ~vDRG~~s~Evl~~L~~LK~~~P~~v~lLRGNHE~~~~~~~~gF~~e~~~~~g~~~~~~~~~~~f~~LPlaaii~~~ilc 82 (227)
.+|||..|.|++..+++.|+++|+++|++|||||+..|+..|||..|+..+| .+..+..+.++|.+||+|-.|+++++.
T Consensus 251 fv~rgs~s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~~ky-te~~~~~f~~~f~~LPl~~~i~~~~~~ 329 (476)
T KOG0376|consen 251 FVDRGSWSVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVKAKY-TEEMFNLFSEVFIWLPLAHLINNKVLV 329 (476)
T ss_pred eeeecccceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcchhhhh-HHHHHHhhhhhhccccchhhhcCceEE
Confidence 4899999999999999999999999999999999999999999999999999 778888888999999999999999999
Q ss_pred eecCcCCCC-CCHhhhhhhhcccCCCCCCcccccccCCCCCCCCcccCCCCceeecChhhHHhhhhhcCceEEEecccee
Q 027178 83 VHGGLSPDI-RTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLV 161 (227)
Q Consensus 83 vHgGi~~~~-~~l~~i~~i~r~~~~~~~~~~~dlLWsDP~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~l~~iIRgHe~~ 161 (227)
+|||++..- .++++|++|.|+..+|+++..+++|||||...+|+.+|.||.|..||.+++++||+.|+++.||||||+.
T Consensus 330 ~hgglf~~~~v~l~d~r~i~r~~~~~~~~~~~~~lws~pq~~~g~s~S~r~~g~~fG~d~t~~f~~~n~l~~i~rshe~~ 409 (476)
T KOG0376|consen 330 MHGGLFSPDGVTLEDFRNIDRFEQPPEEGLMCELLWSDPQPANGRSPSKRGVGLQFGPDVTERFLQDNNLDKIIRSHEVK 409 (476)
T ss_pred EecCcCCCCCccHHHHHhhhhccCCcccccccccccCCCccccCCCccccCceeeeCCCchhhHHhhcchHHHhhccccC
Confidence 999997554 4899999999998888899999999999999999999999999999999999999999999999999999
Q ss_pred ecceeeEecCCeEEEEEcCCCCCccCCCcEEEEEEc-CCCceEEEEeeccccc
Q 027178 162 QEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFN-ENMEREVKFFTETEEN 213 (227)
Q Consensus 162 ~~G~~~~~~~~~~iTifSa~~y~~~~~N~~avl~i~-~~~~~~~~~~~~~~~~ 213 (227)
+.||++.+ +|+|+|||||||||+..+|.||++.++ +++...+++|+|.|+.
T Consensus 410 d~gy~~eh-~g~l~tvfsapnycd~~~n~ga~i~~~~~~~~p~~~~~e~vp~~ 461 (476)
T KOG0376|consen 410 DEGYEVEH-SGKLITVFSAPNYCDQMGNKGAFIHLEPDDLTPNFYTFEAVPHP 461 (476)
T ss_pred CCceeeec-CCcEEEEecCcchhhhcCCcceEEEecCCCCccceeecccCCCC
Confidence 99999999 999999999999999999999999998 6789999999999987
No 19
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=99.95 E-value=1.8e-27 Score=200.23 Aligned_cols=181 Identities=41% Similarity=0.638 Sum_probs=146.7
Q ss_pred ccCCCCCcHHHHHHHHHHHHhCCCcEEEeccCCcCccccccCCcHHHH--------HHHhCChhHHHHHHHHHhhhhhhe
Q 027178 3 QRQITYLCLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDEC--------QRKYGNANAWRYCTDVFDYLTLSA 74 (227)
Q Consensus 3 ~vDRG~~s~Evl~~L~~LK~~~P~~v~lLRGNHE~~~~~~~~gF~~e~--------~~~~g~~~~~~~~~~~f~~LPlaa 74 (227)
++|||+.|.||+.++..++.+ |..+++||||||.+.++...++..+. ...+....+++.+.+++..||+++
T Consensus 34 ~vdrg~~~~~~l~~l~~~~~~-~~~~~~l~GNHe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~ 112 (225)
T cd00144 34 YVDRGPDSVEVIDLLLALKIL-PDNVILLRGNHEDMLLNFLYGFYDEDEWIGGTLRLLKKLGEDLWEEFNDVFFYLPLAA 112 (225)
T ss_pred EeCCCCCcHHHHHHHHHhcCC-CCcEEEEccCchhhhhhhhcCCcchhhccchhHHHHHhhCHHHHHHHHHHHHhCcHhe
Confidence 589999999999999999988 99999999999998887766655442 223334678889999999999999
Q ss_pred eecC-eEEEeecCcCCCCCCHhhhhhhhcccCCCCCCcccccccCCCCCCCC-cccCCCCceeecChhhHHhhhhhcCce
Q 027178 75 IIDG-TVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIET-WAVSPRGAGWLFGSRVTSEFNHINNLD 152 (227)
Q Consensus 75 ii~~-~ilcvHgGi~~~~~~l~~i~~i~r~~~~~~~~~~~dlLWsDP~~~~~-~~~~~rg~g~~fg~~~~~~fl~~~~l~ 152 (227)
.++. +++|||||+++.....+++. ..+.+....+++|++|..... ...++|+. ++++.+.|++.++.+
T Consensus 113 ~~~~~~~~~vHag~~~~~~~~~~~~------~~~~~~~~~~~lw~r~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 182 (225)
T cd00144 113 LIETKKVLCVHGGLSPGLPLEEQIK------EEPEDQLPEDLLWSDPLELPGGFGSSRRGG----GPDAVEWFLKKNGLK 182 (225)
T ss_pred EeCCCeEEEEeCCCCCccchHHhhh------cCcccccceeeeecCCCCCCCCCcCCCCCC----CHHHHHHHHHHCCCe
Confidence 9987 89999999999876544443 234566788999999985332 23334444 999999999999999
Q ss_pred EEEeccceeecceeeEecCCeEEEEEcCCCCCccCCCcEEEEE
Q 027178 153 LVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILS 195 (227)
Q Consensus 153 ~iIRgHe~~~~G~~~~~~~~~~iTifSa~~y~~~~~N~~avl~ 195 (227)
.|||||+++..|+.... .++++||+|++.|++..+|..+++.
T Consensus 183 ~ii~GHt~~~~~~~~~~-~~~~i~IDtg~~~~~~~~~~l~~~~ 224 (225)
T cd00144 183 LIVRGHTPVEEGYEFGH-DGNLITIDSGCNYCGGGGNKLAALV 224 (225)
T ss_pred EEEEcCccccCccEEcC-CCCEEEEecCCcccCCCCccEEEEe
Confidence 99999999999987545 8899999999999876677777664
No 20
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=99.60 E-value=2.4e-15 Score=126.30 Aligned_cols=144 Identities=15% Similarity=0.176 Sum_probs=98.9
Q ss_pred ccCCCCCcHHHHHHHHHHHHhC---CCcEEEeccCCcCccccccCCcH--HHHHHHhC----ChhHH---HHHHHHHhhh
Q 027178 3 QRQITYLCLEVFTILLLLKARY---PANITLLRGNHESRQLTQVYGFY--DECQRKYG----NANAW---RYCTDVFDYL 70 (227)
Q Consensus 3 ~vDRG~~s~Evl~~L~~LK~~~---P~~v~lLRGNHE~~~~~~~~gF~--~e~~~~~g----~~~~~---~~~~~~f~~L 70 (227)
+||||+++.||+.+|..|+... +.+|++||||||.+.++..+.+. .+...... ....+ +.+.++++.+
T Consensus 42 ~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l 121 (208)
T cd07425 42 IFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHELMNLCGDFRYVHPKYFNEFGGLAMRRRELFSPGGELGRWLRSK 121 (208)
T ss_pred CcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcHHHHcchhccCChhHHHHHHhhhhhHHHhcCCccHHHHHHHhC
Confidence 5899999999999999998654 56899999999998886443322 22111110 01122 2457889999
Q ss_pred hhheeecCeEEEeecCcCCCCCCHhhhhhhhcccCCCCCCcccccccCCCCCCCCcccCCCCceeecChhhHHhhhhhcC
Q 027178 71 TLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINN 150 (227)
Q Consensus 71 Plaaii~~~ilcvHgGi~~~~~~l~~i~~i~r~~~~~~~~~~~dlLWsDP~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~ 150 (227)
|+...+++ +++||||++| +|+..--.+ ...... +...++++++.++
T Consensus 122 P~~~~~~~-~~fvHag~~~--------------------------~w~r~y~~~---~~~~~~----~~~~~~~~l~~~~ 167 (208)
T cd07425 122 PVIVKVND-TLFVHGGLGP--------------------------LWYRGYSKE---TSDKEC----AAAHLDKVLERLG 167 (208)
T ss_pred CeEEEECC-EEEEeCCcHH--------------------------HHhhHhhhh---hhhccc----hHHHHHHHHHHcC
Confidence 99998876 8889999932 232100000 000000 1146888999999
Q ss_pred ceEEEeccceeecceeeEecCCeEEEEEcCC
Q 027178 151 LDLVCRAHQLVQEGLKYMFQDKGLVTVWSAP 181 (227)
Q Consensus 151 l~~iIRgHe~~~~G~~~~~~~~~~iTifSa~ 181 (227)
.+.||+||+.++.|....+ ++++++|.+..
T Consensus 168 ~~~iv~GHTh~~~~~~~~~-~g~~i~ID~g~ 197 (208)
T cd07425 168 AKRMVVGHTPQEGGIVTFC-GGKVIRIDVGM 197 (208)
T ss_pred CCeEEEcCeeeecCceEEE-CCEEEEEeCCc
Confidence 9999999999998886456 99999999853
No 21
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=99.55 E-value=6.2e-14 Score=120.51 Aligned_cols=87 Identities=17% Similarity=0.223 Sum_probs=65.8
Q ss_pred ccCCCCCcHHHHHHHHHHHHhCCCcEEEeccCCcCccccccCC-------cHHHHHHHhCC------hhHHHHHHHHHhh
Q 027178 3 QRQITYLCLEVFTILLLLKARYPANITLLRGNHESRQLTQVYG-------FYDECQRKYGN------ANAWRYCTDVFDY 69 (227)
Q Consensus 3 ~vDRG~~s~Evl~~L~~LK~~~P~~v~lLRGNHE~~~~~~~~g-------F~~e~~~~~g~------~~~~~~~~~~f~~ 69 (227)
+||||++|.|||.+|+.+. .+..+++||||||.+.++...+ ...+....|.. .++++.+.++++.
T Consensus 46 liDRGp~S~~vl~~~~~~~--~~~~~~~l~GNHE~~~l~~~~~~~~~~~~gg~~tl~~~~~~~~~~~~~~~~~~~~~~~~ 123 (245)
T PRK13625 46 LTDRGPHSLRMIEIVWELV--EKKAAYYVPGNHCNKLYRFFLGRNVTIAHGLETTVAEYEALPSHKQNMIKEKFITLYEQ 123 (245)
T ss_pred ccCCCcChHHHHHHHHHHh--hCCCEEEEeCccHHHHHHHHhCCCccccchhHhHHHHHhccChhhHHHHHHHHHHHHHh
Confidence 6899999999999998884 4568999999999866542211 11233444432 3577889999999
Q ss_pred hhhheeec-CeEEEeecCcCCCC
Q 027178 70 LTLSAIID-GTVLCVHGGLSPDI 91 (227)
Q Consensus 70 LPlaaii~-~~ilcvHgGi~~~~ 91 (227)
||++..++ +++++||||+.|..
T Consensus 124 lPl~~~~~~~~~~~vHAG~~~~~ 146 (245)
T PRK13625 124 APLYHILDEGRLVVAHAGIRQDY 146 (245)
T ss_pred CCceEEEeCCCEEEEECCCChHh
Confidence 99998874 67999999998763
No 22
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=99.38 E-value=2.6e-12 Score=108.90 Aligned_cols=83 Identities=14% Similarity=0.097 Sum_probs=62.6
Q ss_pred ccCCCCCcHHHHHHHHHHHHhCCCcEEEeccCCcCccccccC------------C-----cHHHHHHHhC-ChhHHHHHH
Q 027178 3 QRQITYLCLEVFTILLLLKARYPANITLLRGNHESRQLTQVY------------G-----FYDECQRKYG-NANAWRYCT 64 (227)
Q Consensus 3 ~vDRG~~s~Evl~~L~~LK~~~P~~v~lLRGNHE~~~~~~~~------------g-----F~~e~~~~~g-~~~~~~~~~ 64 (227)
+||||++|.|||.+|..++. +.++++||||||.+.+.... + ...+..+.++ ..+.++.+.
T Consensus 43 ~IDRGp~S~~vl~~l~~l~~--~~~~~~l~GNHE~~ll~~~~~~~~~~~w~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 120 (222)
T cd07413 43 LIDRGPEIRELLEIVKSMVD--AGHALAVMGNHEFNAIAWHTKDPSGGEWLRAHSKKNLRQHQAFLEQFREHSEEHKDWL 120 (222)
T ss_pred ccCCCCCHHHHHHHHHHhhc--CCCEEEEEccCcHHHHHhhhCCcccchhhhcCCCcccccHHHHHHHHhccchhHHHHH
Confidence 58999999999999999864 34799999999987653211 1 0123444443 246678899
Q ss_pred HHHhhhhhheeecCeEEEeecCcC
Q 027178 65 DVFDYLTLSAIIDGTVLCVHGGLS 88 (227)
Q Consensus 65 ~~f~~LPlaaii~~~ilcvHgGi~ 88 (227)
++++.||++...+ ++++||||+.
T Consensus 121 ~~l~~lP~~~~~~-~~~~VHAg~~ 143 (222)
T cd07413 121 EWFKTLPLFLDLG-GVRVVHACWD 143 (222)
T ss_pred HHHhcCCcEEEEC-CEEEEECCcC
Confidence 9999999998775 5899999985
No 23
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=99.37 E-value=7.1e-12 Score=106.87 Aligned_cols=85 Identities=15% Similarity=0.270 Sum_probs=65.3
Q ss_pred ccCCCCCcHHHHHHHHHHHHhCCCcEEEeccCCcCccccc--------cCCcHHHHHHHhC--ChhHHHHHHHHHhhhhh
Q 027178 3 QRQITYLCLEVFTILLLLKARYPANITLLRGNHESRQLTQ--------VYGFYDECQRKYG--NANAWRYCTDVFDYLTL 72 (227)
Q Consensus 3 ~vDRG~~s~Evl~~L~~LK~~~P~~v~lLRGNHE~~~~~~--------~~gF~~e~~~~~g--~~~~~~~~~~~f~~LPl 72 (227)
+||||++|.|||.+|..++.. ..++++|||||.+.++. ..|+. ++...+. ...+.+.+.++++.||+
T Consensus 47 lIDrG~~s~evl~~l~~l~~~--~~~~~v~GNHE~~l~~~~~~~~~~~~~~~~-~t~~~~~~~~~~~~~~~~~~l~~lP~ 123 (234)
T cd07423 47 LVDRGPDSPEVLRLVMSMVAA--GAALCVPGNHDNKLYRKLQGRNVKITHGLE-ETVAQLEAESEEFKEEVIEFYESLPS 123 (234)
T ss_pred ccCCCCCHHHHHHHHHHHhhC--CcEEEEECCcHHHHHHHhcCCCccccCccc-chHHHHhhccHHHHHHHHHHHHhCCc
Confidence 689999999999999998754 46899999999865542 23333 2333442 24677889999999999
Q ss_pred heeec-CeEEEeecCcCCC
Q 027178 73 SAIID-GTVLCVHGGLSPD 90 (227)
Q Consensus 73 aaii~-~~ilcvHgGi~~~ 90 (227)
...++ ++++|||||+++.
T Consensus 124 ~~~~~~~~~~~vHag~~~~ 142 (234)
T cd07423 124 HLVLDEGKLVVAHAGIKEE 142 (234)
T ss_pred EEEeCCCcEEEEeCCCChH
Confidence 98876 5799999998864
No 24
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=99.37 E-value=2.8e-12 Score=107.37 Aligned_cols=133 Identities=20% Similarity=0.224 Sum_probs=86.3
Q ss_pred ccCCCCCcHHHHHHHHHHHHhCCCcEEEeccCCcCccccccCC--cHHHHHHHhCC--------hhHHHHHHHHHhhhhh
Q 027178 3 QRQITYLCLEVFTILLLLKARYPANITLLRGNHESRQLTQVYG--FYDECQRKYGN--------ANAWRYCTDVFDYLTL 72 (227)
Q Consensus 3 ~vDRG~~s~Evl~~L~~LK~~~P~~v~lLRGNHE~~~~~~~~g--F~~e~~~~~g~--------~~~~~~~~~~f~~LPl 72 (227)
++|||+++.|++.+|.. ..++++|||||.+.+....+ ...+...+.+. .++++.+.++++.||+
T Consensus 38 ~v~~g~~~~~~~~~l~~------~~~~~v~GNhe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~ 111 (207)
T cd07424 38 LIDRGPESLACLELLLE------PWFHAVRGNHEQMAIDALRAEPLDAVRWLANGGEWFLDLPDEELRRWLALKLEQLPL 111 (207)
T ss_pred cccCCCCHHHHHHHHhc------CCEEEeECCChHHHHhHhhCCCcchhHHHhcCCeehhhcChHHHHHHHHHHHHhCCe
Confidence 58999999999998865 35899999999988765443 33333333332 2356778899999999
Q ss_pred heeec---CeEEEeecCcCCCCCCHhhhhhhhcccCCCCCCcccccccCCCCCCCCcccCCCCceeecChhhHHhhhhhc
Q 027178 73 SAIID---GTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHIN 149 (227)
Q Consensus 73 aaii~---~~ilcvHgGi~~~~~~l~~i~~i~r~~~~~~~~~~~dlLWsDP~~~~~~~~~~rg~g~~fg~~~~~~fl~~~ 149 (227)
...++ .++++||||+++... ...+. + +...+....+++|++|...... +...-
T Consensus 112 ~~~i~~~g~~~~~vHag~~~~~~-~~~~~---~--~~~~~~~~~~~~w~~~~~~~~~------------------~~~~~ 167 (207)
T cd07424 112 AIEVETEGGKVGIVHADYPSDDW-SDGVG---A--VTLRPEDIEELLWSRTRIQKAQ------------------TQPIK 167 (207)
T ss_pred EEEEEeCCCEEEEECCCCCcchh-hhhhh---c--cccCcccceeeeeccchhhhcC------------------ccccC
Confidence 99875 479999999965531 11110 0 1223345668999876421110 00111
Q ss_pred CceEEEeccceeecce
Q 027178 150 NLDLVCRAHQLVQEGL 165 (227)
Q Consensus 150 ~l~~iIRgHe~~~~G~ 165 (227)
+.+.||-||+.++...
T Consensus 168 ~~~~iV~GHTh~~~~~ 183 (207)
T cd07424 168 GVDAVVHGHTPVKRPL 183 (207)
T ss_pred CCCEEEECCCCCCcce
Confidence 4577999999987544
No 25
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=99.34 E-value=7.5e-13 Score=114.55 Aligned_cols=93 Identities=20% Similarity=0.167 Sum_probs=68.9
Q ss_pred ccCCCCCcHHHHHHHHHHHHhCCCcEEEeccCCcCccccccCCcHH----HHHHHhCChhHHHHHHHHHhhhhhheeecC
Q 027178 3 QRQITYLCLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYD----ECQRKYGNANAWRYCTDVFDYLTLSAIIDG 78 (227)
Q Consensus 3 ~vDRG~~s~Evl~~L~~LK~~~P~~v~lLRGNHE~~~~~~~~gF~~----e~~~~~g~~~~~~~~~~~f~~LPlaaii~~ 78 (227)
+||||++|+||+.+|..++ .+++++|||||...++..+|+.. +....+-.....+.+.++++.+|++..+++
T Consensus 36 lVdRGp~s~evl~~l~~l~----~~v~~VlGNHD~~ll~~~~g~~~~~~~~t~~~~l~~~~~~~~~~wLr~lPl~~~~~~ 111 (257)
T cd07422 36 LVNRGPDSLETLRFVKSLG----DSAKTVLGNHDLHLLAVAAGIKKPKKKDTLDDILNAPDRDELLDWLRHQPLLHRDPE 111 (257)
T ss_pred cCCCCcCHHHHHHHHHhcC----CCeEEEcCCchHHHHHHhcCccccccHhHHHHHHhccchHHHHHHHHhCCCEEEECC
Confidence 6899999999999999986 57999999999987765555431 111222122334678899999999998875
Q ss_pred -eEEEeecCcCCCCCCHhhhhhh
Q 027178 79 -TVLCVHGGLSPDIRTIDQIRVI 100 (227)
Q Consensus 79 -~ilcvHgGi~~~~~~l~~i~~i 100 (227)
++++|||||+|.. ++++...+
T Consensus 112 ~~~l~vHAGi~p~w-~~~~~~~~ 133 (257)
T cd07422 112 LGILMVHAGIPPQW-SIEQALKL 133 (257)
T ss_pred ccEEEEccCCCCCC-CHHHHHHH
Confidence 7999999999987 44444333
No 26
>COG0639 ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms]
Probab=99.34 E-value=4.7e-12 Score=97.88 Aligned_cols=143 Identities=45% Similarity=0.807 Sum_probs=120.6
Q ss_pred ccccCCcHHHHHHHhCChhHHHH---HHHHHhhhhhheeecC-eEEEeecCcCCCC-CCHhhhhhhhccc--CCCCCCcc
Q 027178 40 LTQVYGFYDECQRKYGNANAWRY---CTDVFDYLTLSAIIDG-TVLCVHGGLSPDI-RTIDQIRVIERNC--EIPHEGPF 112 (227)
Q Consensus 40 ~~~~~gF~~e~~~~~g~~~~~~~---~~~~f~~LPlaaii~~-~ilcvHgGi~~~~-~~l~~i~~i~r~~--~~~~~~~~ 112 (227)
++..+++.+++..+++....|.. ..++|+.||+++++++ .++|.||++++.. ..+++++.+.|.. .....+..
T Consensus 3 l~~~~~~~~~~~~~~~~~~~w~~~~g~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~ 82 (155)
T COG0639 3 LTALYGFYDEKLRKYGEELEWLRAAGGLETFDSLPLAAVAEGGKLLCHHGGLSPGLDRLLDIIEVLDRLRACEVPHAGHT 82 (155)
T ss_pred hhhhhchhHHhhhhcCCceeeeeccchhhHHHhhhHHHHhcCCceeeecCCCCcchhhhHHHHHHHhhhhcccCCCcccc
Confidence 34557888888777755445666 9999999999999999 9999999999976 5788888888876 66667777
Q ss_pred cccccCCCCC--CCCcccCCCCceeecChhhHHhhhhhcCceEEEeccceeecceeeEecCCeEEEEEcCCCCC
Q 027178 113 CDLMWSDPED--IETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYC 184 (227)
Q Consensus 113 ~dlLWsDP~~--~~~~~~~~rg~g~~fg~~~~~~fl~~~~l~~iIRgHe~~~~G~~~~~~~~~~iTifSa~~y~ 184 (227)
.+.+|++|.. ...|.++++|.+..+ .+....|+..+..+.+.|+|+.+..++...+ .+..+|.|++++|+
T Consensus 83 ~~~~~~~~~~~~~~~w~~~~~g~~~~~-~~~~~~f~~~~~~~~~~~~~~~~~~d~~~~~-~~~~lt~~~~~~~~ 154 (155)
T COG0639 83 HDLLWSDPDGGDRRIWNPGPRGVPRDG-GDVTAVFGIVHTPKLIERAHVLYDIDTGAVF-GGGLLTAFSAPNYC 154 (155)
T ss_pred ccccCCCCCCCcccccccCCCCCCccc-cchhhHHhhhcccceEEEEeEEEecCceEEe-CCCeeeEEeccccc
Confidence 7889999984 678999999998888 7788899988888889999999999999866 54999999999986
No 27
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=99.31 E-value=1.3e-11 Score=107.86 Aligned_cols=85 Identities=19% Similarity=0.146 Sum_probs=64.3
Q ss_pred ccCCCCCcHHHHHHHHHHHHhCCCcEEEeccCCcCccccccCCcHH----HHHHHhCChhHHHHHHHHHhhhhhheee-c
Q 027178 3 QRQITYLCLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYD----ECQRKYGNANAWRYCTDVFDYLTLSAII-D 77 (227)
Q Consensus 3 ~vDRG~~s~Evl~~L~~LK~~~P~~v~lLRGNHE~~~~~~~~gF~~----e~~~~~g~~~~~~~~~~~f~~LPlaaii-~ 77 (227)
+||||+.|.||+.+|..+ +..++++|||||...+...+|+.. +....+-.....+.+.++++.+|+...+ +
T Consensus 38 lVdrGp~s~~vl~~l~~l----~~~~~~VlGNHD~~ll~~~~g~~~~~~~~~l~~~l~~~~~~~~~~~L~~lPl~~~~~~ 113 (275)
T PRK00166 38 LVNRGPDSLEVLRFVKSL----GDSAVTVLGNHDLHLLAVAAGIKRNKKKDTLDPILEAPDRDELLDWLRHQPLLHVDEE 113 (275)
T ss_pred ccCCCcCHHHHHHHHHhc----CCCeEEEecChhHHHHHhhcCCccccchhHHHHHHccccHHHHHHHHHCCCcEEEECC
Confidence 689999999999999877 446899999999977665555331 1222221223456688999999998876 5
Q ss_pred CeEEEeecCcCCCC
Q 027178 78 GTVLCVHGGLSPDI 91 (227)
Q Consensus 78 ~~ilcvHgGi~~~~ 91 (227)
+++++||||++|..
T Consensus 114 ~~~l~vHAGi~p~~ 127 (275)
T PRK00166 114 LGLVMVHAGIPPQW 127 (275)
T ss_pred CCEEEEccCCCCCC
Confidence 67999999999986
No 28
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=99.29 E-value=6.1e-11 Score=103.93 Aligned_cols=163 Identities=15% Similarity=0.141 Sum_probs=106.3
Q ss_pred ccCCCCCcHHHHHHHHHHHHhCCC-cEEEeccCCcCccccccC-------------------------------------
Q 027178 3 QRQITYLCLEVFTILLLLKARYPA-NITLLRGNHESRQLTQVY------------------------------------- 44 (227)
Q Consensus 3 ~vDRG~~s~Evl~~L~~LK~~~P~-~v~lLRGNHE~~~~~~~~------------------------------------- 44 (227)
+||||++|.||+.+|.+++..+|. .+++||||||.+.+....
T Consensus 44 yVDRGPdS~eVld~L~~l~~~~~~~~vv~LrGNHE~~~l~fL~~~p~~~d~~~f~~~w~~~~~~~e~~~~~~~~~~~~~h 123 (304)
T cd07421 44 YCDRGPETRKVIDFLISLPEKHPKQRHVFLCGNHDFAFAAFLGVLPRPSDGSEFKSTWKEYEKNEEREGWYKGEGFENMH 123 (304)
T ss_pred cCCCCCCHHHHHHHHHHhhhcccccceEEEecCChHHHHhHhhcCCCccchhhhhhhhcccccccccccccccccccccc
Confidence 589999999999999999999986 688999999954432110
Q ss_pred ----Cc----------------------HHHHHHHhCC--------hhHHHHHHHHHhhhhhheeecCeE----------
Q 027178 45 ----GF----------------------YDECQRKYGN--------ANAWRYCTDVFDYLTLSAIIDGTV---------- 80 (227)
Q Consensus 45 ----gF----------------------~~e~~~~~g~--------~~~~~~~~~~f~~LPlaaii~~~i---------- 80 (227)
.+ -.++..+||- ..+.+.+.+|.+.||+....++ +
T Consensus 124 ~~g~~W~~~~~~~~~~~~~~~~~~~~~gg~~Tl~SYGv~~~~~~l~~avP~~H~~fl~~l~~~~~~~~-~~~~~~~g~~~ 202 (304)
T cd07421 124 LQGRRWAGKMKVTFNTVRGEPYKGSIYDARPTFESYGVPHGSSDLIKAVPEEHKKFLRNLVWVHEEDD-VCIETEEGLKH 202 (304)
T ss_pred ccccchhhhccccccccccccccccccCcHHHHHHcCCCcchHHHHHhCCHHHHHHHHhCCceEEeCc-ccccccccccc
Confidence 00 1345667763 2567788999999999987665 5
Q ss_pred ---EEeecCcCCCCCCHhhhhhhh-cccCCCCCCcccccccCCCCCCCCcccCCCCceeecChhhHHhhhhhcCceEEEe
Q 027178 81 ---LCVHGGLSPDIRTIDQIRVIE-RNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCR 156 (227)
Q Consensus 81 ---lcvHgGi~~~~~~l~~i~~i~-r~~~~~~~~~~~dlLWsDP~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~l~~iIR 156 (227)
++||||+-|...--+|.+.+. +....| -.++||....- -..++. +. ..=.+||-
T Consensus 203 ~~lifVHAGlrPg~pLe~Q~~~L~~~d~~~p----~~~~l~~R~~f----~~~~~~-------------~~-~~~~~VVh 260 (304)
T cd07421 203 CKLIAVHAGLEKSNSVEEQLKLLRTKDTSIP----KIAPLSGRKNV----WNIPQE-------------LA-DKKTIVVS 260 (304)
T ss_pred cceEEEEcccCCCCChHHhhhhhhccccccc----cccccccchhh----hcCccc-------------cc-CCCeEEEE
Confidence 999999999876555555543 112222 22778864431 001100 00 01278999
Q ss_pred ccceeecceeeEecCCeEEEEEcCCCCCccCCCcEEEEEEc
Q 027178 157 AHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFN 197 (227)
Q Consensus 157 gHe~~~~G~~~~~~~~~~iTifSa~~y~~~~~N~~avl~i~ 197 (227)
||.. +..+ .+.-|.|-+...|.+ .--|++.+-
T Consensus 261 GHt~-----~~~~-~~~Ri~iDtGa~~~~---~l~aa~vlp 292 (304)
T cd07421 261 GHHG-----KLHI-DGLRLIIDEGGGFDD---RPIAAIVLP 292 (304)
T ss_pred CCCC-----Ccee-cCCEEEEECCCCcCC---ceeEEEEec
Confidence 9992 2445 777788888877754 334444443
No 29
>PHA02239 putative protein phosphatase
Probab=99.25 E-value=3.4e-11 Score=103.03 Aligned_cols=139 Identities=14% Similarity=0.127 Sum_probs=91.4
Q ss_pred ccCCCCCcHHHHHHHHHHHHhCCCcEEEeccCCcCcccccc-----CCc-----H----HHHHHHhCC------------
Q 027178 3 QRQITYLCLEVFTILLLLKARYPANITLLRGNHESRQLTQV-----YGF-----Y----DECQRKYGN------------ 56 (227)
Q Consensus 3 ~vDRG~~s~Evl~~L~~LK~~~P~~v~lLRGNHE~~~~~~~-----~gF-----~----~e~~~~~g~------------ 56 (227)
+||||+.|.||+..|+.++. .+..++.|+||||.+.+... .+. . .++...||.
T Consensus 39 ~iDrG~~s~~v~~~l~~~~~-~~~~~~~l~GNHE~~~l~~~~~~~~~~~~~~~wl~~GG~~Tl~Syg~~~~~~~~~~~~~ 117 (235)
T PHA02239 39 YVDRGKRSKDVVNYIFDLMS-NDDNVVTLLGNHDDEFYNIMENVDRLSIYDIEWLSRYCIETLNSYGVSTVTLKYSSVEE 117 (235)
T ss_pred cCCCCCChHHHHHHHHHHhh-cCCCeEEEECCcHHHHHHHHhCchhcccchHHHHHcCCHHHHHHcCCCCccchhhHHHH
Confidence 68999999999999999864 45678899999998754311 000 0 234456642
Q ss_pred ------------------hhHHHHHHHHHhhhhhheeecCeEEEeecCcCCCCCCHhhhhhhhcccCCCCCCcccccccC
Q 027178 57 ------------------ANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWS 118 (227)
Q Consensus 57 ------------------~~~~~~~~~~f~~LPlaaii~~~ilcvHgGi~~~~~~l~~i~~i~r~~~~~~~~~~~dlLWs 118 (227)
...+..+.++.+.||+....++ +++||||+.|... + .++...+++|.
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~lp~~~~~~~-~ifVHAGi~p~~~-~-------------~~q~~~~llWi 182 (235)
T PHA02239 118 NLRNNYDFIKSELKKLKESDDYRKFKILMVNCRKYYKEDK-YIFSHSGGVSWKP-V-------------EEQTIDQLIWS 182 (235)
T ss_pred HHHHhhhhhhhhhhhcccchhhHHHHHHHHhCcceEEECC-EEEEeCCCCCCCC-h-------------hhCCHhHeEEe
Confidence 1134566678889999998765 9999999977632 1 22335689997
Q ss_pred CCCCCCCcccCCCCceeecChhhHHhhhhhcCceEEEeccceeecceeeEecCCeEEEEEcCCCC
Q 027178 119 DPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNY 183 (227)
Q Consensus 119 DP~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~l~~iIRgHe~~~~G~~~~~~~~~~iTifSa~~y 183 (227)
.. | . ....=+.||-||+++..+.-. . .++.|.|-+..-|
T Consensus 183 R~-----f--~-----------------~~~~g~~vV~GHTp~~~~~~~-~-~~~~I~IDtGa~~ 221 (235)
T PHA02239 183 RD-----F--Q-----------------PRKDGFTYVCGHTPTDSGEVE-I-NGDMLMCDVGAVF 221 (235)
T ss_pred cc-----c--C-----------------CCCCCcEEEECCCCCCCCccc-c-cCCEEEeecCccc
Confidence 43 1 0 111225799999998765433 2 3456777776544
No 30
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=99.21 E-value=2.4e-11 Score=105.97 Aligned_cols=90 Identities=18% Similarity=0.182 Sum_probs=68.1
Q ss_pred ccCCCCCcHHHHHHHHHHHHhCCCcEEEeccCCcCccccccCCcH-----HHHHHHhCChhHHHHHHHHHhhhhhheeec
Q 027178 3 QRQITYLCLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFY-----DECQRKYGNANAWRYCTDVFDYLTLSAIID 77 (227)
Q Consensus 3 ~vDRG~~s~Evl~~L~~LK~~~P~~v~lLRGNHE~~~~~~~~gF~-----~e~~~~~g~~~~~~~~~~~f~~LPlaaii~ 77 (227)
+||||++|+||+.++..++ ..+++++||||...+...+|+. +.+..-+ .....+.+.++.+.+|+....+
T Consensus 38 lVdRGP~slevL~~l~~l~----~~~~~VlGNHD~~lL~~~~g~~~~~~~d~l~~~l-~a~~~~ell~wLr~lPl~i~~~ 112 (279)
T TIGR00668 38 LVARGPGSLEVLRYVKSLG----DAVRLVLGNHDLHLLAVFAGISRNKPKDRLDPLL-EAPDADELLNWLRRQPLLQHDE 112 (279)
T ss_pred ccCCCCCHHHHHHHHHhcC----CCeEEEEChhHHHHHHHhcCCCccCchHHHHHHH-HccCHHHHHHHHHcCCcEEEeC
Confidence 6899999999999998774 4678999999998877666652 2222222 2345678899999999997664
Q ss_pred -CeEEEeecCcCCCCCCHhhhh
Q 027178 78 -GTVLCVHGGLSPDIRTIDQIR 98 (227)
Q Consensus 78 -~~ilcvHgGi~~~~~~l~~i~ 98 (227)
.++++|||||+|.. ++++..
T Consensus 113 ~~~~~lVHAGi~P~w-~l~~a~ 133 (279)
T TIGR00668 113 EKKLVMAHAGITPQW-DLQTAK 133 (279)
T ss_pred CCCEEEEecCCCCCC-cHHHHH
Confidence 46999999999987 454444
No 31
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=99.04 E-value=6.5e-10 Score=93.93 Aligned_cols=142 Identities=13% Similarity=0.102 Sum_probs=82.7
Q ss_pred ccCCCCCcHHHHHHHHHHHHhCCCcEEEeccCCcCccccccCCcHHHHH--------HHhC--ChhHHHHHHHHHhhhhh
Q 027178 3 QRQITYLCLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQ--------RKYG--NANAWRYCTDVFDYLTL 72 (227)
Q Consensus 3 ~vDRG~~s~Evl~~L~~LK~~~P~~v~lLRGNHE~~~~~~~~gF~~e~~--------~~~g--~~~~~~~~~~~f~~LPl 72 (227)
+||||++|.|||.+|.. + .++.+|||||.+.++...+-..... .... ..+.+..+.++++.||+
T Consensus 54 lvDrGp~s~~vl~~l~~-----~-~~~~v~GNHE~~~l~~~~~~~~~~w~~~gg~~~~~l~~~~~~~~~~~~~~l~~LP~ 127 (218)
T PRK11439 54 LIDRGPQSLRCLQLLEE-----H-WVRAVRGNHEQMALDALASQQMSLWLMNGGDWFIALTDNQQKQAKTLLEKCQRLPF 127 (218)
T ss_pred ccCCCcCHHHHHHHHHc-----C-CceEeeCchHHHHHHHHHCCccchhhhCCChhhhhcchhhhHHHHHHHHHHhcCCc
Confidence 68999999999999854 2 4788999999876642211000000 1111 12355677789999999
Q ss_pred heeec---CeEEEeecCcCCCCCCHhhhhhhhcccCCCCCCcccccccCCCCCCCCcccCCCCceeecChhhHHhhhhhc
Q 027178 73 SAIID---GTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHIN 149 (227)
Q Consensus 73 aaii~---~~ilcvHgGi~~~~~~l~~i~~i~r~~~~~~~~~~~dlLWsDP~~~~~~~~~~rg~g~~fg~~~~~~fl~~~ 149 (227)
.-.++ +++++||||++.... +.. . .....+++|+.+.....+. .+ ...
T Consensus 128 ~~~~~~~~~~~~~vHAg~p~~~~--~~~----~------~~~~~~~~w~r~~~~~~~~--~~---------------~~~ 178 (218)
T PRK11439 128 ILEVHCRTGKHVIAHADYPADVY--EWQ----K------DVDLHQVLWSRSRLGERQK--GQ---------------GIT 178 (218)
T ss_pred EEEeeccCCCEEEEeCCCCCCch--hhh----c------cCCccceEEcChhhhhccc--cc---------------ccc
Confidence 87653 579999999853321 000 0 0123467886432111000 00 112
Q ss_pred CceEEEeccceeecceeeEecCCeEEEEEcCCCC
Q 027178 150 NLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNY 183 (227)
Q Consensus 150 ~l~~iIRgHe~~~~G~~~~~~~~~~iTifSa~~y 183 (227)
+.+.+|-||++++.-. . .+..+-|-+-+-|
T Consensus 179 ~~~~vv~GHT~~~~~~---~-~~~~i~IDtGav~ 208 (218)
T PRK11439 179 GADHFWFGHTPLRHRV---D-IGNLHYIDTGAVF 208 (218)
T ss_pred CCCEEEECCccCCCcc---c-cCCEEEEECCCCC
Confidence 4467999999986433 2 3456777776655
No 32
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=98.84 E-value=1.9e-08 Score=85.01 Aligned_cols=81 Identities=15% Similarity=0.013 Sum_probs=52.8
Q ss_pred ccCCCCCcHHHHHHHHHHHHhCCCcEEEeccCCcCccccccCC--cHH------HHHHHhCC--hhHHHHHHHHHhhhhh
Q 027178 3 QRQITYLCLEVFTILLLLKARYPANITLLRGNHESRQLTQVYG--FYD------ECQRKYGN--ANAWRYCTDVFDYLTL 72 (227)
Q Consensus 3 ~vDRG~~s~Evl~~L~~LK~~~P~~v~lLRGNHE~~~~~~~~g--F~~------e~~~~~g~--~~~~~~~~~~f~~LPl 72 (227)
+||||++|.||+.+|.. ..++.+|||||.+.+....+ ... +-...... ........++++.||+
T Consensus 52 ~vdrG~~~~~~l~~l~~------~~~~~v~GNHE~~~~~~~~~~~~~~~~~~gg~~~~~l~~~~~~~~~~~~~~L~~LP~ 125 (218)
T PRK09968 52 NIDRGPESLNVLRLLNQ------PWFISVKGNHEAMALDAFETGDGNMWLASGGDWFFDLNDSEQQEATDLLLKFHHLPH 125 (218)
T ss_pred CcCCCcCHHHHHHHHhh------CCcEEEECchHHHHHHHHhcCChhHHHHccCHHHhcCCHHHHHHHHHHHHHHhcCCe
Confidence 68999999999998853 25789999999876642210 000 00011111 1233445668899999
Q ss_pred heeec---CeEEEeecCcCC
Q 027178 73 SAIID---GTVLCVHGGLSP 89 (227)
Q Consensus 73 aaii~---~~ilcvHgGi~~ 89 (227)
...+. .++++||||++.
T Consensus 126 ~~~~~~~g~~~~~vHAg~p~ 145 (218)
T PRK09968 126 IIEITNDNIKYVIAHADYPG 145 (218)
T ss_pred EEEEeeCCCcEEEEeCCCCC
Confidence 98764 578999999853
No 33
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=97.86 E-value=8.3e-05 Score=56.83 Aligned_cols=124 Identities=16% Similarity=0.036 Sum_probs=77.6
Q ss_pred ccCCCCCcHHHHHHH--HHHHHhCCCcEEEeccCCcCccccccCCcHHHHHHH---------------------------
Q 027178 3 QRQITYLCLEVFTIL--LLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK--------------------------- 53 (227)
Q Consensus 3 ~vDRG~~s~Evl~~L--~~LK~~~P~~v~lLRGNHE~~~~~~~~gF~~e~~~~--------------------------- 53 (227)
++|+|..+.+..... ...+...+..+++++||||.......+.........
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (200)
T PF00149_consen 41 LVDGGNPSEEWRAQFWFFIRLLNPKIPVYFILGNHDYYSGNSFYGFYDYQFEDYYGNYNYYYSYFNNKVIFDNDNFWFNS 120 (200)
T ss_dssp SSSSSSHHHHHHHHHHHHHHHHHTTTTEEEEE-TTSSHHHHHHHHHHHHHHSSEEECSSEEECTESSEEEEEETTEEEEE
T ss_pred ccccccccccchhhhccchhhhhccccccccccccccceeccccccccccccccccccccccccCcceeeeccccccccc
Confidence 578888888877765 777777888899999999997654333222222110
Q ss_pred ------hCChhHHHHHHHHHhhhhhheeecCeEEEeecCcCCCCCCHhhhhhhhcccCCCCCCcccccccCCCCCCCCcc
Q 027178 54 ------YGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWA 127 (227)
Q Consensus 54 ------~g~~~~~~~~~~~f~~LPlaaii~~~ilcvHgGi~~~~~~l~~i~~i~r~~~~~~~~~~~dlLWsDP~~~~~~~ 127 (227)
...................+......|+++|.++.+....-...
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~H~p~~~~~~~~~~~------------------------------ 170 (200)
T PF00149_consen 121 GNNEYPDYGMEAQQEWWLWLLLLLEAKNDDPVIVFTHHPPYSSSSDSSSY------------------------------ 170 (200)
T ss_dssp HCCHTHHSEHHHHHHHHHHHHHHHHEEEESEEEEEESSSSSTTSSSTHHH------------------------------
T ss_pred ccccccccccccchhcccccccccccccccceeEEEecCCCCcccccccc------------------------------
Confidence 00011222223333334444556678999999997664211111
Q ss_pred cCCCCceeecChhhHHhhhhhcCceEEEecccee
Q 027178 128 VSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLV 161 (227)
Q Consensus 128 ~~~rg~g~~fg~~~~~~fl~~~~l~~iIRgHe~~ 161 (227)
.......+.+..++++.++++++.||...
T Consensus 171 -----~~~~~~~~~~~~~~~~~~v~~~~~GH~H~ 199 (200)
T PF00149_consen 171 -----GNESKGREALEELLKKYNVDLVLSGHTHR 199 (200)
T ss_dssp -----SSEEEHHHHHHHHHHHTTCSEEEEESSSS
T ss_pred -----chhhccHHHHHHHHhhCCCCEEEeCceec
Confidence 12344667899999999999999999854
No 34
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=97.23 E-value=0.004 Score=53.45 Aligned_cols=41 Identities=15% Similarity=0.069 Sum_probs=33.7
Q ss_pred HHHHHhCChhHHHHHHHHHhhhhhheeecCeEEEeecCcCC
Q 027178 49 ECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSP 89 (227)
Q Consensus 49 e~~~~~g~~~~~~~~~~~f~~LPlaaii~~~ilcvHgGi~~ 89 (227)
++.+.||..++.+++..++++++.++.-...||+.|+++.-
T Consensus 119 ~vr~~fgi~s~~eA~~~ive~~~~~~~~~~~VliaH~~~~G 159 (238)
T cd07397 119 AVKAVYGVISLEESAQRIIAAAKKAPPDLPLILLAHNGPSG 159 (238)
T ss_pred HHHHHhCCCCHHHHHHHHHHHhhhcCCCCCeEEEeCcCCcC
Confidence 67888887789999999999998555555689999999864
No 35
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=95.84 E-value=0.12 Score=40.58 Aligned_cols=23 Identities=13% Similarity=-0.008 Sum_probs=17.3
Q ss_pred HhhhhhcCceEEEeccceeecce
Q 027178 143 SEFNHINNLDLVCRAHQLVQEGL 165 (227)
Q Consensus 143 ~~fl~~~~l~~iIRgHe~~~~G~ 165 (227)
.++++..+.++++-||.-.+.-.
T Consensus 95 ~~~~~~~~~d~vi~GHtH~~~~~ 117 (155)
T cd00841 95 LYLAKEGGADVVLYGHTHIPVIE 117 (155)
T ss_pred hhhhhhcCCCEEEECcccCCccE
Confidence 34456778899999999886543
No 36
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=95.69 E-value=0.062 Score=39.53 Aligned_cols=29 Identities=31% Similarity=0.299 Sum_probs=23.7
Q ss_pred ChhhHHhhhhhcCceEEEeccceeeccee
Q 027178 138 GSRVTSEFNHINNLDLVCRAHQLVQEGLK 166 (227)
Q Consensus 138 g~~~~~~fl~~~~l~~iIRgHe~~~~G~~ 166 (227)
....+...+...+...+|-||.-....+.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~GH~H~~~~~~ 119 (131)
T cd00838 91 GSEALLELLEKYGVDLVLSGHTHVYERRE 119 (131)
T ss_pred hHHHHHHHHHHhCCCEEEeCCeecccccc
Confidence 45678888899999999999998865554
No 37
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=95.18 E-value=0.35 Score=38.21 Aligned_cols=22 Identities=9% Similarity=0.072 Sum_probs=16.2
Q ss_pred HHhhhhhcCceEEEeccceeec
Q 027178 142 TSEFNHINNLDLVCRAHQLVQE 163 (227)
Q Consensus 142 ~~~fl~~~~l~~iIRgHe~~~~ 163 (227)
++.+.+..+.+.+|-||.-.+.
T Consensus 98 l~~~~~~~~~d~vi~GHtH~~~ 119 (158)
T TIGR00040 98 LEYLAKELGVDVLIFGHTHIPV 119 (158)
T ss_pred HHHHHhccCCCEEEECCCCCCc
Confidence 3444566788999999988754
No 38
>KOG0918 consensus Selenium-binding protein [Inorganic ion transport and metabolism]
Probab=95.04 E-value=0.00044 Score=62.75 Aligned_cols=193 Identities=11% Similarity=-0.014 Sum_probs=123.6
Q ss_pred cCCCCCcHHHHHHHHHHHHhCCCcEEEeccCCcCccccccCCcHHHHHHHhCC---hhHHHHHHHHHhhhhhheeecCeE
Q 027178 4 RQITYLCLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGN---ANAWRYCTDVFDYLTLSAIIDGTV 80 (227)
Q Consensus 4 vDRG~~s~Evl~~L~~LK~~~P~~v~lLRGNHE~~~~~~~~gF~~e~~~~~g~---~~~~~~~~~~f~~LPlaaii~~~i 80 (227)
+|++.++++.+-+-++.+..+-..--..++||+ ..+++..++...-+. ..+++..++-++..+.+++.+ +|
T Consensus 58 s~t~c~vI~r~~~~~~gdelhhsgwn~~ssc~~-----~~~~~R~~LVlp~l~S~riyvid~~~ep~~~~l~k~i~~-~i 131 (476)
T KOG0918|consen 58 SPTYCQVIHRLPMPYLGDELHHSGWNSCSSCHG-----DSSFKRRYLVLPSLNSGRIYVIDVKTEPRKPSLEKTIDP-DI 131 (476)
T ss_pred CCcceeeEEEeccCcccchhcccchhhhhhhcc-----CcchhhhheeecccccCceEEEEeccCcCccceeeeech-hh
Confidence 478888999999999999999888888999994 345666665543322 357788899999999999777 89
Q ss_pred EEeecCcCCCCCCHhhhhhhhcccCCCCCCcccccccCCCCCCC-----CcccCCCCceeecChh--hHHhhhhhcCceE
Q 027178 81 LCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIE-----TWAVSPRGAGWLFGSR--VTSEFNHINNLDL 153 (227)
Q Consensus 81 lcvHgGi~~~~~~l~~i~~i~r~~~~~~~~~~~dlLWsDP~~~~-----~~~~~~rg~g~~fg~~--~~~~fl~~~~l~~ 153 (227)
+|.||+.+|.......+..+.-.. .-+..-..+. |-++.+.+ .|.. ++...+||.+ ..-++......+.
T Consensus 132 l~~~~l~~Pht~hcla~g~v~vs~-lGd~~gn~kg-~f~llD~~~~~k~tw~~--~~~~p~~gyDfwyqpr~~~mIstew 207 (476)
T KOG0918|consen 132 LEKTGLACPHTSHCLASGNVMVSC-LGDAEGNAKG-GFLLLDSDFNEKGTWEK--PGHSPLFGYDFWYQPRHNVMISTEW 207 (476)
T ss_pred HhhcCCcCCcccccccCCCeeEEe-ecccccCCcC-CeEEecCccceeccccc--CCCccccccceeeccccceEEeecc
Confidence 999999999986544444322110 0011111122 44444333 3321 2223333333 2345556666777
Q ss_pred EEeccceeecceeeEecCCeEEEEEcCCCCCccCCCcEEEEEEcCCC--ceEEEEeec
Q 027178 154 VCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENM--EREVKFFTE 209 (227)
Q Consensus 154 iIRgHe~~~~G~~~~~~~~~~iTifSa~~y~~~~~N~~avl~i~~~~--~~~~~~~~~ 209 (227)
..+.|.....+.+. ++++ ++.++..-|.-..+|..+.+.+..++ ..+++.++.
T Consensus 208 gap~~~~~gf~~~~-v~d~--lyg~~lhvy~w~~~~~~QtidL~~~gllpleiRfLh~ 262 (476)
T KOG0918|consen 208 GAPNALRKGFNPAD-VEDG--LYGSHLHVYQWSPGELKQTIDLGDTGLLPLEIRFLHN 262 (476)
T ss_pred cCchhhhcCCChhH-hhcc--ceeeeeEEEecCCccceeEEecCCCCcceEEeeeccC
Confidence 77777764444433 3344 88999998887778999999998763 244444443
No 39
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=94.41 E-value=0.49 Score=36.32 Aligned_cols=31 Identities=13% Similarity=-0.075 Sum_probs=26.6
Q ss_pred ecChhhHHhhhhhcCceEEEeccceeeccee
Q 027178 136 LFGSRVTSEFNHINNLDLVCRAHQLVQEGLK 166 (227)
Q Consensus 136 ~fg~~~~~~fl~~~~l~~iIRgHe~~~~G~~ 166 (227)
..|.+.+.+++++.+.+.+|-||.-.+.|++
T Consensus 90 ~~g~~~~~~~~~~~~~~~~i~GH~H~~~~~~ 120 (135)
T cd07379 90 RVGCEELLNRVQRVRPKLHVFGHIHEGYGAE 120 (135)
T ss_pred ccCCHHHHHHHHHHCCcEEEEcCcCCcCcee
Confidence 3466788888999999999999999988886
No 40
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=94.17 E-value=1.9 Score=35.06 Aligned_cols=24 Identities=13% Similarity=0.180 Sum_probs=18.8
Q ss_pred hhHHhhhhhcCceEEEeccceeec
Q 027178 140 RVTSEFNHINNLDLVCRAHQLVQE 163 (227)
Q Consensus 140 ~~~~~fl~~~~l~~iIRgHe~~~~ 163 (227)
+.+.++.++.+.+.+|-||.-.+.
T Consensus 96 ~~~~~~~~~~~~dvii~GHTH~p~ 119 (178)
T cd07394 96 DSLAALQRQLDVDILISGHTHKFE 119 (178)
T ss_pred HHHHHHHHhcCCCEEEECCCCcce
Confidence 345566677899999999998764
No 41
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=93.82 E-value=0.18 Score=40.00 Aligned_cols=37 Identities=14% Similarity=0.092 Sum_probs=26.2
Q ss_pred hhHHhhhhhcCceEEEeccceeecceeeEecCCeEEEEEcCC
Q 027178 140 RVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAP 181 (227)
Q Consensus 140 ~~~~~fl~~~~l~~iIRgHe~~~~G~~~~~~~~~~iTifSa~ 181 (227)
+.+.+++++.+++.+|-||.-...+.+. +| ++++++|
T Consensus 127 ~~l~~~~~~~~v~~~i~GH~H~~~~~~~---~g--~~~~~np 163 (166)
T cd07404 127 VDLDDLILADPIDLWIHGHTHFNFDYRI---GG--TRVLSNQ 163 (166)
T ss_pred hccHhHHhhcCCCEEEECCccccceEEE---CC--EEEEecC
Confidence 3466777888999999999988766643 33 3455554
No 42
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=93.74 E-value=0.39 Score=37.10 Aligned_cols=56 Identities=16% Similarity=0.111 Sum_probs=34.0
Q ss_pred ChhhHHhhhhhcCceEEEeccceeecceeeEecCCeEEEEEcCCCCCccCCCcEEEEEEc
Q 027178 138 GSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFN 197 (227)
Q Consensus 138 g~~~~~~fl~~~~l~~iIRgHe~~~~G~~~~~~~~~~iTifSa~~y~~~~~N~~avl~i~ 197 (227)
+.+.+.+.+...+.++++-||.-.+.-.+ .++..+++.-|..... .+...+++.++
T Consensus 97 ~~~~~~~~~~~~~~~~~~~GH~H~~~~~~--~~~~~~~~~Gs~~~~~--~~~~~~~~i~~ 152 (156)
T PF12850_consen 97 DPAELREILSRENVDLVLHGHTHRPQVFK--IGGIHVINPGSIGGPR--HGDQSGYAILD 152 (156)
T ss_dssp THHHHHHHHHHTTSSEEEESSSSSEEEEE--ETTEEEEEE-GSSS-S--SSSSEEEEEEE
T ss_pred ChhhhhhhhcccCCCEEEcCCcccceEEE--ECCEEEEECCcCCCCC--CCCCCEEEEEE
Confidence 34456677779999999999998765444 3344556555543322 22366666664
No 43
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=93.65 E-value=0.56 Score=36.08 Aligned_cols=29 Identities=17% Similarity=0.190 Sum_probs=24.4
Q ss_pred ChhhHHhhhhhcCceEEEeccceeeccee
Q 027178 138 GSRVTSEFNHINNLDLVCRAHQLVQEGLK 166 (227)
Q Consensus 138 g~~~~~~fl~~~~l~~iIRgHe~~~~G~~ 166 (227)
|.+++.+++++.+.+.++-||.-.+..+.
T Consensus 79 g~~~l~~~l~~~~~~~vl~GH~H~~~~~~ 107 (129)
T cd07403 79 GFEAFLDFIDRFRPKLFIHGHTHLNYGYQ 107 (129)
T ss_pred CHHHHHHHHHHHCCcEEEEcCcCCCcCcc
Confidence 55788889999999999999998876665
No 44
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=93.35 E-value=1 Score=34.63 Aligned_cols=30 Identities=17% Similarity=0.053 Sum_probs=24.8
Q ss_pred ChhhHHhhhhhcCceEEEeccceeecceee
Q 027178 138 GSRVTSEFNHINNLDLVCRAHQLVQEGLKY 167 (227)
Q Consensus 138 g~~~~~~fl~~~~l~~iIRgHe~~~~G~~~ 167 (227)
+.+.+.+.+++.+++.++-||.-.+..+..
T Consensus 101 ~~~~~~~~l~~~~~~~~l~GH~H~~~~~~~ 130 (144)
T cd07400 101 DAGDALKLLAEAGVDLVLHGHKHVPYVGNI 130 (144)
T ss_pred CHHHHHHHHHHcCCCEEEECCCCCcCeeec
Confidence 556788899999999999999988765543
No 45
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=93.13 E-value=1.7 Score=36.37 Aligned_cols=71 Identities=15% Similarity=0.203 Sum_probs=41.2
Q ss_pred ChhhHHhhhhhc-CceEEEeccceeecceeeE----ecCCeEEEEEcCCCCCccCCC-cEEEEEEcCC-CceEEEEeec
Q 027178 138 GSRVTSEFNHIN-NLDLVCRAHQLVQEGLKYM----FQDKGLVTVWSAPNYCYRCGN-VASILSFNEN-MEREVKFFTE 209 (227)
Q Consensus 138 g~~~~~~fl~~~-~l~~iIRgHe~~~~G~~~~----~~~~~~iTifSa~~y~~~~~N-~~avl~i~~~-~~~~~~~~~~ 209 (227)
+.+.+.+.++++ ++++++-||.-.. +.... ..++.+..+.+........+| .=.++.++++ ..+.+..|.|
T Consensus 136 ~~~~~~~ll~~~~~V~~v~~GH~H~~-~~~~~~~~~~~g~~v~~~~~~~q~~~~~g~~~~r~~~f~~~~~~i~~~tysp 213 (214)
T cd07399 136 GQQIWDKLVKKNDNVFMVLSGHVHGA-GRTTLVSVGDAGRTVHQMLADYQGEPNGGNGFLRLLEFDPDNNKIDVRTYSP 213 (214)
T ss_pred HHHHHHHHHhCCCCEEEEEccccCCC-ceEEEcccCCCCCEeeEEeecccCCCCCCcceEEEEEEecCCCEEEEEeCCC
Confidence 445677888888 8999999997642 22221 114445556554322211122 1236777776 4777777765
No 46
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=92.47 E-value=0.98 Score=43.76 Aligned_cols=158 Identities=15% Similarity=0.217 Sum_probs=89.1
Q ss_pred HHHHhCChhHHHHHHH-HHhhhhhheeecCeEEEeecCcCCCCC-----------------CHhhhhhhhcccC----CC
Q 027178 50 CQRKYGNANAWRYCTD-VFDYLTLSAIIDGTVLCVHGGLSPDIR-----------------TIDQIRVIERNCE----IP 107 (227)
Q Consensus 50 ~~~~~g~~~~~~~~~~-~f~~LPlaaii~~~ilcvHgGi~~~~~-----------------~l~~i~~i~r~~~----~~ 107 (227)
+...|..++-.+.+.+ +|+.=.+.-+.|+ -|.-||.||-.-. -++.++++-|..- ..
T Consensus 376 L~~sF~~SekLq~Hi~FL~~kGsmY~~~N~-NLLfHGCIPl~edG~F~~~~i~g~~y~Gk~llD~~e~~~R~ay~~~~~~ 454 (640)
T PF06874_consen 376 LKNSFQNSEKLQRHIRFLYSKGSMYKIYNG-NLLFHGCIPLNEDGSFKEVTIDGKTYSGKALLDFFERIIRRAYFDHDSE 454 (640)
T ss_pred HHHHHHcCHHHHHHHHHHHHcCCEEEEEcC-ceEEEeecccCCCCCeeEEEECCEeeccHHHHHHHHHHHHHHhhcCCcc
Confidence 4455655444444444 4555555555566 4556999985422 1455555544321 22
Q ss_pred CCCcc---cccccCCCCC-C------CCcc----cC------CCCcee--ecChhhHHhhhhhcCce----EEEecccee
Q 027178 108 HEGPF---CDLMWSDPED-I------ETWA----VS------PRGAGW--LFGSRVTSEFNHINNLD----LVCRAHQLV 161 (227)
Q Consensus 108 ~~~~~---~dlLWsDP~~-~------~~~~----~~------~rg~g~--~fg~~~~~~fl~~~~l~----~iIRgHe~~ 161 (227)
.+... .+-||.-|.. . .+|+ .. +.+.-| .=.++..++.|+..|++ .||-||.+|
T Consensus 455 ~~~~~~D~~WYLWcG~~SPLFGK~~MtTFERyFI~Dk~th~E~knpYY~l~~~e~~c~~IL~EFgl~~~~~hIINGHvPV 534 (640)
T PF06874_consen 455 KDQYATDFMWYLWCGPKSPLFGKDKMTTFERYFIADKETHKEPKNPYYKLREDEEICDKILEEFGLDPERGHIINGHVPV 534 (640)
T ss_pred cccccCceEEeeecCCCCCccchhHHHHHHHHHhcChhhccCCCCcchhhccCHHHHHHHHHHhCCCCCCCeEECCcccc
Confidence 23333 4555666652 1 1111 00 111111 22456678899999998 999999998
Q ss_pred e--cceeeEecCCeEEEEE---cCCCCCccCCCcEEEEEEcCCCceEEEEeecc
Q 027178 162 Q--EGLKYMFQDKGLVTVW---SAPNYCYRCGNVASILSFNENMEREVKFFTET 210 (227)
Q Consensus 162 ~--~G~~~~~~~~~~iTif---Sa~~y~~~~~N~~avl~i~~~~~~~~~~~~~~ 210 (227)
. .|=..--++||++.|- |.+ |-...|=.|-.|..+ .-.+.+.+-+|-
T Consensus 535 k~k~GEsPIKa~Gkl~VIDGGfskA-Yqk~TGIAGYTLiyN-S~gl~L~~H~pF 586 (640)
T PF06874_consen 535 KVKKGESPIKANGKLIVIDGGFSKA-YQKTTGIAGYTLIYN-SYGLQLVAHQPF 586 (640)
T ss_pred ccCCCCCCccCCCEEEEEcChhhhh-hccccCccceEEEec-CCcceeccCCCC
Confidence 6 7887766899999994 443 444444344455444 444666665554
No 47
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=91.49 E-value=0.013 Score=54.62 Aligned_cols=175 Identities=11% Similarity=-0.066 Sum_probs=118.1
Q ss_pred cCCCCCcHHHHHHHHHHHHhCCCcEEEeccCCcCccccccCCcHHHHHHHhCC--hhHHHHHHHHHhhhhhheeecCeEE
Q 027178 4 RQITYLCLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGN--ANAWRYCTDVFDYLTLSAIIDGTVL 81 (227)
Q Consensus 4 vDRG~~s~Evl~~L~~LK~~~P~~v~lLRGNHE~~~~~~~~gF~~e~~~~~g~--~~~~~~~~~~f~~LPlaaii~~~il 81 (227)
++++....+.+..|...+...|+...+.|++||+..+...++|..++...++. +.++..+... +..|+++...+.++
T Consensus 82 ~m~l~~~~~A~~~l~~~~~l~Pnd~~~~r~~~Ec~~~vs~~~fe~ai~~~~~d~~s~~~~~~~~~-~~~~i~~~y~g~~l 160 (476)
T KOG0376|consen 82 VMALGEFKKALLDLEKVKKLAPNDPDATRKIDECNKIVSEEKFEKAILTPEGDKKSVVEMKIDEE-DMDLIESDYSGPVL 160 (476)
T ss_pred HHhHHHHHHHHHHHHHhhhcCcCcHHHHHHHHHHHHHHHHHhhhhcccCCccCCccccccccccc-cccccccccCCccc
Confidence 56788899999999999999999999999999999999999999998888854 2233323222 22236666666555
Q ss_pred EeecCcCCCCCCHhhhhhhh-------------------------cccCCCC-CCcccccccCCCCCCCC-cccCCCCce
Q 027178 82 CVHGGLSPDIRTIDQIRVIE-------------------------RNCEIPH-EGPFCDLMWSDPEDIET-WAVSPRGAG 134 (227)
Q Consensus 82 cvHgGi~~~~~~l~~i~~i~-------------------------r~~~~~~-~~~~~dlLWsDP~~~~~-~~~~~rg~g 134 (227)
=-| ++ +++.+..+. |..+.+- -..-.+..|++|.+..| +-+..++.+
T Consensus 161 e~~-----kv-t~e~vk~~~~~~~~~~~L~~k~a~~i~~~~~~~~~~l~~~ve~~~~~d~~~sv~gd~hGqfydl~nif~ 234 (476)
T KOG0376|consen 161 EDH-----KV-TLEFVKTLMEVFKNQKKLPKKYAYSILDLAKTILRKLPSLVEISVPGDVKISVCGDTHGQFYDLLNIFE 234 (476)
T ss_pred ccc-----hh-hHHHHHHHHHhhhcccccccccceeeHHHHhhHHhcCCcceEeecCCCceEEecCCccccccchhhhHh
Confidence 444 21 222222221 1111111 11346888998887654 345577778
Q ss_pred eecChhhHHhhhhhcCceEEEecccee------------ecceeeEe--cCCeEEEEEcCCCCCc
Q 027178 135 WLFGSRVTSEFNHINNLDLVCRAHQLV------------QEGLKYMF--QDKGLVTVWSAPNYCY 185 (227)
Q Consensus 135 ~~fg~~~~~~fl~~~~l~~iIRgHe~~------------~~G~~~~~--~~~~~iTifSa~~y~~ 185 (227)
...+++....|+.+.++.-+++.|.-+ ..+|.... ..+.+.+||+++.++-
T Consensus 235 l~g~Ps~t~~ylfngdfv~rgs~s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~ 299 (476)
T KOG0376|consen 235 LNGLPSETNPYLFNGDFVDRGSWSVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVK 299 (476)
T ss_pred hcCCCCCcccccccCceeeecccceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcchh
Confidence 888889999999999999999988754 22332211 2346899999988763
No 48
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=88.81 E-value=14 Score=31.46 Aligned_cols=59 Identities=14% Similarity=0.040 Sum_probs=34.7
Q ss_pred hhhHHhhhhhcCceEEEeccceeecceeeEecCCeEEEEEcCCCCCccCCCcE-EEEEEcCCC
Q 027178 139 SRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVA-SILSFNENM 200 (227)
Q Consensus 139 ~~~~~~fl~~~~l~~iIRgHe~~~~G~~~~~~~~~~iTifSa~~y~~~~~N~~-avl~i~~~~ 200 (227)
.+.+.+.+++.++++++-||.-...... + ++--.-+-+|+.+.....+.| .++.++++.
T Consensus 195 ~~~l~~ll~~~~V~~v~~GH~H~~~~~~--~-~g~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 254 (262)
T cd07395 195 RKPLLDKFKKAGVKAVFSGHYHRNAGGR--Y-GGLEMVVTSAIGAQLGNDKSGLRIVKVTEDK 254 (262)
T ss_pred HHHHHHHHHhcCceEEEECccccCCceE--E-CCEEEEEcCceecccCCCCCCcEEEEECCCc
Confidence 3467778888999999999998876543 3 432222223333332223333 377776553
No 49
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=85.72 E-value=18 Score=29.47 Aligned_cols=68 Identities=21% Similarity=0.108 Sum_probs=39.7
Q ss_pred hhhHHhhhhhcCceEEEeccceeecceeeEecCC-eEEEEEcCCCCCccCCCcEEEEEEcCC-CceEEEEeeccc
Q 027178 139 SRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDK-GLVTVWSAPNYCYRCGNVASILSFNEN-MEREVKFFTETE 211 (227)
Q Consensus 139 ~~~~~~fl~~~~l~~iIRgHe~~~~G~~~~~~~~-~~iTifSa~~y~~~~~N~~avl~i~~~-~~~~~~~~~~~~ 211 (227)
...++.+.+..+.+.+|.||.-.+.=.+. ++ .++.==|.+.+- +++.++++.++.+ .++....++...
T Consensus 98 ~~~l~~la~~~~~Dvli~GHTH~p~~~~~---~~i~~vNPGS~s~pr--~~~~~sy~il~~~~~~~~~~~~~~~~ 167 (172)
T COG0622 98 LSLLEYLAKELGADVLIFGHTHKPVAEKV---GGILLVNPGSVSGPR--GGNPASYAILDVDNLEVEVLFLERDR 167 (172)
T ss_pred HHHHHHHHHhcCCCEEEECCCCcccEEEE---CCEEEEcCCCcCCCC--CCCCcEEEEEEcCCCEEEEEEeeccc
Confidence 34666677888999999999987533322 33 122222333332 3455566666544 567777766443
No 50
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=82.48 E-value=23 Score=30.62 Aligned_cols=34 Identities=12% Similarity=0.173 Sum_probs=25.9
Q ss_pred ccCCCCcee----ecChhhHHhhhhhcCceEEEeccce
Q 027178 127 AVSPRGAGW----LFGSRVTSEFNHINNLDLVCRAHQL 160 (227)
Q Consensus 127 ~~~~rg~g~----~fg~~~~~~fl~~~~l~~iIRgHe~ 160 (227)
.+.+.+.|+ +-+++..++.|++.+-.+|.-||+-
T Consensus 189 ~~~~~~~g~~yq~~l~~~~s~~il~~~~P~~vfsGhdH 226 (257)
T cd08163 189 TPLPYGYGYQYQNLLEPSLSEVILKAVQPVIAFSGDDH 226 (257)
T ss_pred CCCCCCCCccceeecCHHHHHHHHHhhCCcEEEecCCC
Confidence 344445553 3477889999999999999999884
No 51
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=77.40 E-value=16 Score=34.64 Aligned_cols=66 Identities=15% Similarity=0.202 Sum_probs=42.1
Q ss_pred hhhHHhhhhhcCce----EEEeccceee--cceeeEecCCeEEEEEc--CCCCCccCCCcEEEEEEcCCCceEEE
Q 027178 139 SRVTSEFNHINNLD----LVCRAHQLVQ--EGLKYMFQDKGLVTVWS--APNYCYRCGNVASILSFNENMEREVK 205 (227)
Q Consensus 139 ~~~~~~fl~~~~l~----~iIRgHe~~~--~G~~~~~~~~~~iTifS--a~~y~~~~~N~~avl~i~~~~~~~~~ 205 (227)
++...+.|+..|++ .||.||.+|. +|-..-.++|+++-|-. |-.|....+=.|-.|..+ ...++.+
T Consensus 515 e~ic~kil~eFGLdpe~ghiINGHtPVke~~GE~PIKAngKliVIDGGFskAYqs~TgiAGYTllYN-SfGmqLv 588 (648)
T COG3855 515 EEICRKILEEFGLDPEGGHIINGHTPVKEKNGENPIKANGKLIVIDGGFSKAYQSTTGIAGYTLLYN-SFGMQLV 588 (648)
T ss_pred HHHHHHHHHHhCCCcccCceecCCCcccccCCCCCccCCCeEEEEcCchhhhhhcccccceeEeeec-chhhhHh
Confidence 34577889999887 8999999986 44444347999998844 233443444444455554 3334443
No 52
>PRK09453 phosphodiesterase; Provisional
Probab=69.19 E-value=4.5 Score=32.61 Aligned_cols=13 Identities=38% Similarity=0.606 Sum_probs=10.9
Q ss_pred CcEEEeccCCcCc
Q 027178 26 ANITLLRGNHESR 38 (227)
Q Consensus 26 ~~v~lLRGNHE~~ 38 (227)
..++++|||||..
T Consensus 64 ~~v~~V~GNhD~~ 76 (182)
T PRK09453 64 DKIIAVRGNCDSE 76 (182)
T ss_pred CceEEEccCCcch
Confidence 4699999999974
No 53
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=66.24 E-value=6.8 Score=31.26 Aligned_cols=32 Identities=25% Similarity=0.273 Sum_probs=19.3
Q ss_pred ccCCCCCcHHHHHHHHHHHHhCCCcEEEeccCCcCcc
Q 027178 3 QRQITYLCLEVFTILLLLKARYPANITLLRGNHESRQ 39 (227)
Q Consensus 3 ~vDRG~~s~Evl~~L~~LK~~~P~~v~lLRGNHE~~~ 39 (227)
++++|..+.. +.++ + ..+..+++++||||...
T Consensus 52 l~~~~~~~~~-~~~l---~-~~~~~~~~v~GNHD~~~ 83 (168)
T cd07390 52 FSFGGKAGTE-LELL---S-RLNGRKHLIKGNHDSSL 83 (168)
T ss_pred CCCCCChHHH-HHHH---H-hCCCCeEEEeCCCCchh
Confidence 4566665433 2222 2 23456999999999754
No 54
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=65.66 E-value=5 Score=33.00 Aligned_cols=35 Identities=23% Similarity=0.227 Sum_probs=21.1
Q ss_pred ccCCCCCcH-HHHHHHHHHHHhCCCcEEEeccCCcCcc
Q 027178 3 QRQITYLCL-EVFTILLLLKARYPANITLLRGNHESRQ 39 (227)
Q Consensus 3 ~vDRG~~s~-Evl~~L~~LK~~~P~~v~lLRGNHE~~~ 39 (227)
++|.+..+. ++..++-.++ .+..++.+.||||...
T Consensus 42 ~~~~~~~~~~~~~~~l~~l~--~~~~v~~v~GNHD~~~ 77 (223)
T cd07385 42 LVDGSVDVLELLLELLKKLK--APLGVYAVLGNHDYYS 77 (223)
T ss_pred ccCCcchhhHHHHHHHhccC--CCCCEEEECCCccccc
Confidence 356666554 3333443332 3345999999999853
No 55
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=65.04 E-value=5.2 Score=34.34 Aligned_cols=26 Identities=38% Similarity=0.604 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHhCCCcEEEeccCCcCcc
Q 027178 11 LEVFTILLLLKARYPANITLLRGNHESRQ 39 (227)
Q Consensus 11 ~Evl~~L~~LK~~~P~~v~lLRGNHE~~~ 39 (227)
.|+-.++-.++.. .+.++||||+...
T Consensus 86 ~~~~~f~~~~~~~---evi~i~GNHD~~i 111 (235)
T COG1407 86 EEVREFLELLDER---EVIIIRGNHDNGI 111 (235)
T ss_pred HHHHHHHHHhccC---cEEEEeccCCCcc
Confidence 3444444444443 4999999999854
No 56
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=64.62 E-value=25 Score=29.25 Aligned_cols=50 Identities=10% Similarity=0.121 Sum_probs=30.6
Q ss_pred ccCCCCCcH--HHHHHHHHHHHhCC----CcEEEeccCCcCccccccCCcHHHHHHHh
Q 027178 3 QRQITYLCL--EVFTILLLLKARYP----ANITLLRGNHESRQLTQVYGFYDECQRKY 54 (227)
Q Consensus 3 ~vDRG~~s~--Evl~~L~~LK~~~P----~~v~lLRGNHE~~~~~~~~gF~~e~~~~~ 54 (227)
++|.|+.+- |....+-.++..|+ -.++.+.||||.-.-. ..-..+..++|
T Consensus 52 L~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG~~~--~~~~~~~v~RF 107 (195)
T cd08166 52 LMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIGGEE--EDPIESKIRRF 107 (195)
T ss_pred ccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcCCCC--CCcCHHHHHHH
Confidence 568888653 46666666665544 4688999999974211 11225555666
No 57
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=62.60 E-value=8.1 Score=32.57 Aligned_cols=29 Identities=17% Similarity=0.119 Sum_probs=24.5
Q ss_pred ecChhhHHhhhhhcCceEEEeccceeecc
Q 027178 136 LFGSRVTSEFNHINNLDLVCRAHQLVQEG 164 (227)
Q Consensus 136 ~fg~~~~~~fl~~~~l~~iIRgHe~~~~G 164 (227)
.+|...+.+++++.+++++|-||--...+
T Consensus 195 ~~~s~~l~~li~~~~v~~~i~GH~H~~~~ 223 (239)
T TIGR03729 195 FLGSQHFGQLLVKYEIKDVIFGHLHRRFG 223 (239)
T ss_pred ccChHHHHHHHHHhCCCEEEECCccCCCC
Confidence 56778899999999999999999876543
No 58
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=60.26 E-value=13 Score=30.31 Aligned_cols=21 Identities=19% Similarity=0.053 Sum_probs=15.5
Q ss_pred HHhhhhhcCceEEEeccceee
Q 027178 142 TSEFNHINNLDLVCRAHQLVQ 162 (227)
Q Consensus 142 ~~~fl~~~~l~~iIRgHe~~~ 162 (227)
..+.+...++++++-||--..
T Consensus 181 ~~~~~~~~~~d~v~~GH~H~~ 201 (223)
T cd00840 181 VPEALLPAGFDYVALGHIHRP 201 (223)
T ss_pred CcHhhcCcCCCEEECCCcccC
Confidence 344466778999999998654
No 59
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=59.86 E-value=11 Score=31.84 Aligned_cols=26 Identities=12% Similarity=0.031 Sum_probs=20.6
Q ss_pred ChhhHHhhhhhcCceEEEeccceeec
Q 027178 138 GSRVTSEFNHINNLDLVCRAHQLVQE 163 (227)
Q Consensus 138 g~~~~~~fl~~~~l~~iIRgHe~~~~ 163 (227)
+.+.+.+.+++.++++++-||.-...
T Consensus 181 ~~~~~~~~~~~~~v~~vl~GH~H~~~ 206 (232)
T cd07393 181 DDSPISKLIEEYGVDICVYGHLHGVG 206 (232)
T ss_pred CHHHHHHHHHHcCCCEEEECCCCCCc
Confidence 44567788888899999999987643
No 60
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=56.54 E-value=14 Score=29.66 Aligned_cols=35 Identities=14% Similarity=-0.065 Sum_probs=20.6
Q ss_pred hhhcCceEEEeccceeecceeeEe----cCCeEEEEEcCCC
Q 027178 146 NHINNLDLVCRAHQLVQEGLKYMF----QDKGLVTVWSAPN 182 (227)
Q Consensus 146 l~~~~l~~iIRgHe~~~~G~~~~~----~~~~~iTifSa~~ 182 (227)
+++.+..+++.||.-- +.+..+ +.-..|||=|++.
T Consensus 130 ~~~~~~~~~lsGH~H~--~~~~~~~~~~~~~~ei~v~S~s~ 168 (171)
T cd07384 130 LDTIKPVLILSGHDHD--QCEVVHSSKAGSVREITVKSFSW 168 (171)
T ss_pred HhccCceEEEeCcccC--CeEEEecCCCCCceEEeeccchh
Confidence 4556778888998853 233333 1235677777653
No 61
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=55.13 E-value=23 Score=30.62 Aligned_cols=25 Identities=24% Similarity=0.216 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHhCCCcEEEeccCCcCc
Q 027178 12 EVFTILLLLKARYPANITLLRGNHESR 38 (227)
Q Consensus 12 Evl~~L~~LK~~~P~~v~lLRGNHE~~ 38 (227)
++...|-.|+...| ++.+.||||..
T Consensus 101 ~~~~~L~~L~~~~p--v~~V~GNHD~~ 125 (271)
T PRK11340 101 AFSDVLSPLAECAP--TFACFGNHDRP 125 (271)
T ss_pred HHHHHHHHHhhcCC--EEEecCCCCcc
Confidence 44455666665455 99999999974
No 62
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=54.13 E-value=20 Score=30.73 Aligned_cols=36 Identities=22% Similarity=0.229 Sum_probs=22.4
Q ss_pred ccCCCCCcHHHH----HHHHHHHHhCCCcEEEeccCCcCc
Q 027178 3 QRQITYLCLEVF----TILLLLKARYPANITLLRGNHESR 38 (227)
Q Consensus 3 ~vDRG~~s~Evl----~~L~~LK~~~P~~v~lLRGNHE~~ 38 (227)
+.|+..-+.+.. .+|-.|+...|-.|+++.|||+..
T Consensus 49 i~d~~~p~~~~~~~~~~~l~~l~~~~~i~v~~i~GNHD~~ 88 (253)
T TIGR00619 49 VFDTANPPAEAQELFNAFFRNLSDANPIPIVVISGNHDSA 88 (253)
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHhcCCceEEEEccCCCCh
Confidence 347665555443 244444444445699999999985
No 63
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=53.26 E-value=8.9 Score=32.70 Aligned_cols=11 Identities=45% Similarity=0.652 Sum_probs=9.0
Q ss_pred CeEEEeecCcC
Q 027178 78 GTVLCVHGGLS 88 (227)
Q Consensus 78 ~~ilcvHgGi~ 88 (227)
-||||+||=.-
T Consensus 6 ~rvLcLHGfrQ 16 (230)
T KOG2551|consen 6 LRVLCLHGFRQ 16 (230)
T ss_pred ceEEEecchhh
Confidence 57999999763
No 64
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=52.10 E-value=18 Score=28.58 Aligned_cols=13 Identities=23% Similarity=0.470 Sum_probs=11.1
Q ss_pred CcEEEeccCCcCc
Q 027178 26 ANITLLRGNHESR 38 (227)
Q Consensus 26 ~~v~lLRGNHE~~ 38 (227)
..+++++||||..
T Consensus 77 ~~i~~v~GNHD~~ 89 (156)
T cd08165 77 LPLHVVVGNHDIG 89 (156)
T ss_pred CeEEEEcCCCCcC
Confidence 4699999999974
No 65
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=51.59 E-value=21 Score=30.72 Aligned_cols=26 Identities=12% Similarity=-0.014 Sum_probs=21.8
Q ss_pred cChhhHHhhhhhc-CceEEEeccceee
Q 027178 137 FGSRVTSEFNHIN-NLDLVCRAHQLVQ 162 (227)
Q Consensus 137 fg~~~~~~fl~~~-~l~~iIRgHe~~~ 162 (227)
.+.+.+.+.+++. +++.++-||.-..
T Consensus 181 ~n~~~l~~ll~~~~~v~~vl~GH~H~~ 207 (275)
T PRK11148 181 RNAHELAEVLAKFPNVKAILCGHIHQE 207 (275)
T ss_pred CCHHHHHHHHhcCCCceEEEecccChH
Confidence 3567888899997 8999999999864
No 66
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=51.53 E-value=17 Score=28.59 Aligned_cols=31 Identities=19% Similarity=0.193 Sum_probs=25.9
Q ss_pred ecChhhHHhhhhhcCceEEEeccceeeccee
Q 027178 136 LFGSRVTSEFNHINNLDLVCRAHQLVQEGLK 166 (227)
Q Consensus 136 ~fg~~~~~~fl~~~~l~~iIRgHe~~~~G~~ 166 (227)
..|.+++.+++++.+.++++-||--.+.+..
T Consensus 147 ~~g~~~l~~li~~~~~~~~l~GH~H~~~~~~ 177 (188)
T cd07392 147 HVGSKAIRKFIEERQPLLCICGHIHESRGVD 177 (188)
T ss_pred ccCCHHHHHHHHHhCCcEEEEecccccccee
Confidence 3577899999999999999999988766554
No 67
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=50.86 E-value=14 Score=31.17 Aligned_cols=65 Identities=11% Similarity=0.071 Sum_probs=40.3
Q ss_pred ChhhHHhhhhhcCceEEEeccceeecceeeEecCCeEEEEEcCCCCCccCCCcEEEEEEcCCCceEEEEee
Q 027178 138 GSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMEREVKFFT 208 (227)
Q Consensus 138 g~~~~~~fl~~~~l~~iIRgHe~~~~G~~~~~~~~~~iTifSa~~y~~~~~N~~avl~i~~~~~~~~~~~~ 208 (227)
.++++.+.+++.+.+.+|-||.-.+.=..... ++.-++-.+-++. ...+.++++++++ .++..|.
T Consensus 175 ~~~~~~~~~~~~~~~~~i~GH~H~~~~~~~~~-~~~~~~~~~lgdw----~~~~~~~~~~~~~-~~~~~~~ 239 (241)
T PRK05340 175 NPEAVAALMEKHGVDTLIHGHTHRPAIHQLQA-GGQPATRIVLGDW----HEQGSVLKVDADG-VELIPFP 239 (241)
T ss_pred CHHHHHHHHHHhCCCEEEECcccCcceeeccC-CCcceEEEEeCCC----CCCCeEEEEECCc-eEEEeCC
Confidence 45678888899999999999998754333322 3222233333333 2347888888654 6666553
No 68
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=50.76 E-value=21 Score=28.42 Aligned_cols=16 Identities=31% Similarity=0.655 Sum_probs=12.7
Q ss_pred hCCCcEEEeccCCcCc
Q 027178 23 RYPANITLLRGNHESR 38 (227)
Q Consensus 23 ~~P~~v~lLRGNHE~~ 38 (227)
..+-.|++++||||..
T Consensus 73 ~~~~~v~~i~GNHD~~ 88 (172)
T cd07391 73 AKDVDVILIRGNHDGG 88 (172)
T ss_pred cCCCeEEEEcccCccc
Confidence 3455799999999984
No 69
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=47.09 E-value=15 Score=30.65 Aligned_cols=59 Identities=22% Similarity=0.312 Sum_probs=33.6
Q ss_pred HHHhCCCcEEEeccCCcCccccccCCcHHHHHHHhCChhHHHHHHHHHhhhhhheeecCeEEEeecCcCCCC
Q 027178 20 LKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDI 91 (227)
Q Consensus 20 LK~~~P~~v~lLRGNHE~~~~~~~~gF~~e~~~~~g~~~~~~~~~~~f~~LPlaaii~~~ilcvHgGi~~~~ 91 (227)
+--.-|..=+++||||+...-+ ...+...+.+ .....++.|..+- .|+++- -|=++|..
T Consensus 68 ~i~~LPG~K~m~rGNHDYWw~s-----~skl~n~lp~--~l~~~n~~f~l~n-~aI~G~-----RgW~s~~~ 126 (230)
T COG1768 68 FIGDLPGTKYMIRGNHDYWWSS-----ISKLNNALPP--ILFYLNNGFELLN-YAIVGV-----RGWDSPSF 126 (230)
T ss_pred hhhcCCCcEEEEecCCccccch-----HHHHHhhcCc--hHhhhccceeEee-EEEEEe-----ecccCCCC
Confidence 3345688899999999986432 2334444422 2334566776665 444443 44455543
No 70
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=45.83 E-value=35 Score=27.74 Aligned_cols=19 Identities=26% Similarity=0.394 Sum_probs=14.7
Q ss_pred hCCCcEEEeccCCcCcccc
Q 027178 23 RYPANITLLRGNHESRQLT 41 (227)
Q Consensus 23 ~~P~~v~lLRGNHE~~~~~ 41 (227)
+-|.+++|++|||+--.-.
T Consensus 71 rLnGrkhlv~GNhDk~~~~ 89 (186)
T COG4186 71 RLNGRKHLVPGNHDKCHPM 89 (186)
T ss_pred HcCCcEEEeeCCCCCCccc
Confidence 4577889999999975433
No 71
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=44.82 E-value=33 Score=29.39 Aligned_cols=28 Identities=7% Similarity=0.031 Sum_probs=21.5
Q ss_pred ecChhhHHhhhhh-cCceEEEeccceeec
Q 027178 136 LFGSRVTSEFNHI-NNLDLVCRAHQLVQE 163 (227)
Q Consensus 136 ~fg~~~~~~fl~~-~~l~~iIRgHe~~~~ 163 (227)
....+.+.+.+++ .++++++-||.-...
T Consensus 201 ~~~~~~~~~ll~~~~~V~~v~~GH~H~~~ 229 (267)
T cd07396 201 LWNHEEVLSILRAYGCVKACISGHDHEGG 229 (267)
T ss_pred ccCHHHHHHHHHhCCCEEEEEcCCcCCCC
Confidence 3445677788887 589999999998754
No 72
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=44.57 E-value=30 Score=32.02 Aligned_cols=36 Identities=17% Similarity=0.115 Sum_probs=22.4
Q ss_pred ccCCCCCcHHHHH----HHHHHHHhCCCcEEEeccCCcCcc
Q 027178 3 QRQITYLCLEVFT----ILLLLKARYPANITLLRGNHESRQ 39 (227)
Q Consensus 3 ~vDRG~~s~Evl~----~L~~LK~~~P~~v~lLRGNHE~~~ 39 (227)
+.|++.-+.+... ++-.|+.. +-.|+++.|||+...
T Consensus 49 ifD~~~p~~~a~~~~~~~l~~L~~~-~~~v~~I~GNHD~~~ 88 (407)
T PRK10966 49 IFDTGSPPSYARELYNRFVVNLQQT-GCQLVVLAGNHDSVA 88 (407)
T ss_pred cccCCCCcHHHHHHHHHHHHHHHhc-CCcEEEEcCCCCChh
Confidence 4588766654432 33344432 345999999999753
No 73
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=44.12 E-value=37 Score=28.07 Aligned_cols=26 Identities=8% Similarity=-0.015 Sum_probs=21.3
Q ss_pred ChhhHHhhhhhc-CceEEEeccceeec
Q 027178 138 GSRVTSEFNHIN-NLDLVCRAHQLVQE 163 (227)
Q Consensus 138 g~~~~~~fl~~~-~l~~iIRgHe~~~~ 163 (227)
+.+.+.+.+++. +++++|-||.-...
T Consensus 169 ~~~~~~~~l~~~~~v~~v~~GH~H~~~ 195 (240)
T cd07402 169 NAEALAAVLARHPNVRAILCGHVHRPI 195 (240)
T ss_pred CHHHHHHHHhcCCCeeEEEECCcCchH
Confidence 456778888888 99999999998743
No 74
>PF05413 Peptidase_C34: Putative closterovirus papain-like endopeptidase; InterPro: IPR008744 RNA-directed RNA polymerase (RdRp) (2.7.7.48 from EC) is an essential protein encoded in the genomes of all RNA containing viruses with no DNA stage [, ]. It catalyses synthesis of the RNA strand complementary to a given RNA template, but the precise molecular mechanism remains unclear. The postulated RNA replication process is a two-step mechanism. First, the initiation step of RNA synthesis begins at or near the 3' end of the RNA template by means of a primer-independent (de novo) mechanism. The de novo initiation consists in the addition of a nucleotide tri-phosphate (NTP) to the 3'-OH of the first initiating NTP. During the following so-called elongation phase, this nucleotidyl transfer reaction is repeated with subsequent NTPs to generate the complementary RNA product []. All the RNA-directed RNA polymerases, and many DNA-directed polymerases, employ a fold whose organisation has been likened to the shape of a right hand with three subdomains termed fingers, palm and thumb []. Only the catalytic palm subdomain, composed of a four-stranded antiparallel beta-sheet with two alpha-helices, is well conserved among all of these enzymes. In RdRp, the palm subdomain comprises three well conserved motifs (A, B and C). Motif A (D-x(4,5)-D) and motif C (GDD) are spatially juxtaposed; the Asp residues of these motifs are implied in the binding of Mg2+ and/or Mn2+. The Asn residue of motif B is involved in selection of ribonucleoside triphosphates over dNTPs and thus determines whether RNA is synthesised rather than DNA []. The domain organisation [] and the 3D structure of the catalytic centre of a wide range of RdPp's, even those with a low overall sequence homology, are conserved. The catalytic centre is formed by several motifs containing a number of conserved amino acid residues. There are 4 superfamilies of viruses that cover all RNA containing viruses with no DNA stage: Viruses containing positive-strand RNA or double-strand RNA, except retroviruses and Birnaviridae: viral RNA-directed RNA polymerases including all positive-strand RNA viruses with no DNA stage, double-strand RNA viruses, and the Cystoviridae, Reoviridae, Hypoviridae, Partitiviridae, Totiviridae families. Mononegavirales (negative-strand RNA viruses with non-segmented genomes). Negative-strand RNA viruses with segmented genomes, i.e. Orthomyxoviruses (including influenza A, B, and C viruses, Thogotoviruses, and the infectious salmon anemia virus), Arenaviruses, Bunyaviruses, Hantaviruses, Nairoviruses, Phleboviruses, Tenuiviruses and Tospoviruses. Birnaviridae family of dsRNA viruses. The RNA-directed RNA polymerases in the first of the above superfamilies can be divided into the following three subgroups: All positive-strand RNA eukaryotic viruses with no DNA stage. All RNA-containing bacteriophages -there are two families of RNA-containing bacteriophages: Leviviridae (positive ssRNA phages) and Cystoviridae (dsRNA phages). Reoviridae family of dsRNA viruses. This signature is found in the RNA-direct RNA polymerase of apple chlorotic leaf spot virus and cherry mottle virus.; GO: 0003723 RNA binding, 0003968 RNA-directed RNA polymerase activity, 0005524 ATP binding, 0019079 viral genome replication
Probab=43.31 E-value=11 Score=26.91 Aligned_cols=8 Identities=75% Similarity=1.024 Sum_probs=6.7
Q ss_pred EEeccCCc
Q 027178 29 TLLRGNHE 36 (227)
Q Consensus 29 ~lLRGNHE 36 (227)
.+|||||=
T Consensus 81 ~~LRGNHF 88 (92)
T PF05413_consen 81 MLLRGNHF 88 (92)
T ss_pred eeecccce
Confidence 68899994
No 75
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=43.29 E-value=27 Score=29.33 Aligned_cols=58 Identities=12% Similarity=0.023 Sum_probs=38.4
Q ss_pred ChhhHHhhhhhcCceEEEeccceeecceeeEecCCeEEEEEcCCCCCccCCCcEEEEEEcCCC
Q 027178 138 GSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENM 200 (227)
Q Consensus 138 g~~~~~~fl~~~~l~~iIRgHe~~~~G~~~~~~~~~~iTifSa~~y~~~~~N~~avl~i~~~~ 200 (227)
.++.+++.++..+.+++|-||.-.+.-..... ++.-.+-.+-++.. ..+.++.+++++
T Consensus 173 ~~~~~~~~~~~~~~~~~i~GHtH~~~~~~~~~-~~~~~~~~~lgdW~----~~~~~~~~~~~g 230 (231)
T TIGR01854 173 NPAEVAAVMRRYGVDRLIHGHTHRPAIHPLQA-DGQPATRIVLGDWY----RQGSILRVDADG 230 (231)
T ss_pred CHHHHHHHHHHcCCCEEEECCccCcceeeccc-CCCccEEEEECCCc----cCCeEEEEcCCC
Confidence 56778888999999999999998765444322 33333555555542 236677777654
No 76
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=41.90 E-value=35 Score=30.95 Aligned_cols=38 Identities=16% Similarity=0.201 Sum_probs=26.5
Q ss_pred ccCCCCCcHHHHHHHHHHHHhCC---CcEEEeccCCcCccc
Q 027178 3 QRQITYLCLEVFTILLLLKARYP---ANITLLRGNHESRQL 40 (227)
Q Consensus 3 ~vDRG~~s~Evl~~L~~LK~~~P---~~v~lLRGNHE~~~~ 40 (227)
+.|++.-|.+++..+...-...- =-|++|.|||+...-
T Consensus 50 lFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv~~I~GNHD~~~~ 90 (390)
T COG0420 50 LFDTNNPSPRALKLFLEALRRLKDAGIPVVVIAGNHDSPSR 90 (390)
T ss_pred cccCCCCCHHHHHHHHHHHHHhccCCCcEEEecCCCCchhc
Confidence 34888888888876554433332 259999999998653
No 77
>PF09637 Med18: Med18 protein; InterPro: IPR019095 The Mediator complex is a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. On recruitment the Mediator complex unfolds to an extended conformation and partially surrounds RNA polymerase II, specifically interacting with the unphosphorylated form of the C-terminal domain (CTD) of RNA polymerase II. The Mediator complex dissociates from the RNA polymerase II holoenzyme and stays at the promoter when transcriptional elongation begins. The Mediator complex is composed of at least 31 subunits: MED1, MED4, MED6, MED7, MED8, MED9, MED10, MED11, MED12, MED13, MED13L, MED14, MED15, MED16, MED17, MED18, MED19, MED20, MED21, MED22, MED23, MED24, MED25, MED26, MED27, MED29, MED30, MED31, CCNC, CDK8 and CDC2L6/CDK11. The subunits form at least three structurally distinct submodules. The head and the middle modules interact directly with RNA polymerase II, whereas the elongated tail module interacts with gene-specific regulatory proteins. Mediator containing the CDK8 module is less active than Mediator lacking this module in supporting transcriptional activation. The head module contains: MED6, MED8, MED11, SRB4/MED17, SRB5/MED18, ROX3/MED19, SRB2/MED20 and SRB6/MED22. The middle module contains: MED1, MED4, NUT1/MED5, MED7, CSE2/MED9, NUT2/MED10, SRB7/MED21 and SOH1/MED31. CSE2/MED9 interacts directly with MED4. The tail module contains: MED2, PGD1/MED3, RGR1/MED14, GAL11/MED15 and SIN4/MED16. The CDK8 module contains: MED12, MED13, CCNC and CDK8. Individual preparations of the Mediator complex lacking one or more distinct subunits have been variously termed ARC, CRSP, DRIP, PC2, SMCC and TRAP. Med18 is one subunit of the Mediator complex and a component of the head module that is involved in stimulating basal RNA polymerase II (PolII) transcription. Med18 consists of an eight-stranded beta-barrel with a central pore and three flanking helices. It complexes with Med8 and Med20 proteins by forming a heterodimer of two-fold symmetry with Med20 and binding the C-terminal alpha-helix region of Med8 across the top of its barrel. This complex creates a multipartite TBP-binding site that can be modulated by transcriptional activators []. ; GO: 0001104 RNA polymerase II transcription cofactor activity, 0006357 regulation of transcription from RNA polymerase II promoter, 0016592 mediator complex; PDB: 2HZM_F 2HZS_H 3RJ1_E 3C0T_A.
Probab=41.34 E-value=42 Score=28.81 Aligned_cols=70 Identities=10% Similarity=0.054 Sum_probs=45.3
Q ss_pred ChhhHHhhhhhcCceEEEeccceeecceeeEecCCeEEEEEcCCCCCccCCCc----EEEEEEcCCCceEEEEeecccc
Q 027178 138 GSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNV----ASILSFNENMEREVKFFTETEE 212 (227)
Q Consensus 138 g~~~~~~fl~~~~l~~iIRgHe~~~~G~~~~~~~~~~iTifSa~~y~~~~~N~----~avl~i~~~~~~~~~~~~~~~~ 212 (227)
....+..||+.+|.... +|++..||++.+ ++-+|+||---.... .++. -+.-.++..+..-+..+-..+.
T Consensus 139 ~~~~~~~fl~~lGy~~~---~Eyv~~G~~F~~-g~i~I~l~ri~~~~~-~~~~~~~~~~l~~~d~s~~~lv~a~v~v~~ 212 (250)
T PF09637_consen 139 TSGSLLSFLNELGYRFD---YEYVVEGYRFFK-GDIVIELFRIFKVPP-PGQYPPPFDKLKPLDPSGSWLVEASVNVPD 212 (250)
T ss_dssp SSSSHHHHHHHTTEEEE---EEEEEEEEEEEE-CCEEEEEEEEEEEET-TCCE---SS-EEECTTTTEEEEEEEEEEST
T ss_pred CCCCHHHHHHHcCCceE---EEEEEEEEEEEE-CCEEEEEEEEEecCC-CCCCCCCcccCCccCCCCCEEEEEEEEccC
Confidence 56778899999997764 999999999988 888888876433221 1221 2344445555555555544443
No 78
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=40.92 E-value=44 Score=27.07 Aligned_cols=22 Identities=9% Similarity=-0.016 Sum_probs=17.6
Q ss_pred hhHHhhhhhcCceEEEecccee
Q 027178 140 RVTSEFNHINNLDLVCRAHQLV 161 (227)
Q Consensus 140 ~~~~~fl~~~~l~~iIRgHe~~ 161 (227)
..++.+.+..+++.++-||.-.
T Consensus 154 ~~~~~~~~~~~v~~v~~GH~H~ 175 (199)
T cd07383 154 GLFKALLERGDVKGVFCGHDHG 175 (199)
T ss_pred HHHHHHHHcCCeEEEEeCCCCC
Confidence 4455667888999999999975
No 79
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=37.72 E-value=2.4e+02 Score=23.50 Aligned_cols=33 Identities=12% Similarity=0.004 Sum_probs=25.0
Q ss_pred eecChhhHHhhhhhcC--ceEEEeccceee--cceee
Q 027178 135 WLFGSRVTSEFNHINN--LDLVCRAHQLVQ--EGLKY 167 (227)
Q Consensus 135 ~~fg~~~~~~fl~~~~--l~~iIRgHe~~~--~G~~~ 167 (227)
.+.........+...+ ++.++.||..+. .-+..
T Consensus 164 ~l~~~~~~~~~~~~~~~~v~~vl~GH~H~~~~~~~~~ 200 (301)
T COG1409 164 ALRDAGELLDVLIAHGNDVRLVLSGHIHLAAQTVYQL 200 (301)
T ss_pred eeecchhHHHHHHhcCCceEEEEeCccccccccccee
Confidence 3555667777788888 999999999987 44543
No 80
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=37.22 E-value=42 Score=27.23 Aligned_cols=28 Identities=11% Similarity=-0.040 Sum_probs=21.6
Q ss_pred ChhhHHhhhhhcCceEEEeccceeecce
Q 027178 138 GSRVTSEFNHINNLDLVCRAHQLVQEGL 165 (227)
Q Consensus 138 g~~~~~~fl~~~~l~~iIRgHe~~~~G~ 165 (227)
.+..+.+.++..+.+.+|-||.-.+.-.
T Consensus 177 ~~~~~~~~~~~~~~~~~i~GH~H~~~~~ 204 (217)
T cd07398 177 FEEAVARLARRKGVDGVICGHTHRPALH 204 (217)
T ss_pred HHHHHHHHHHhcCCCEEEECCCCCCCeE
Confidence 3456677788999999999999775433
No 81
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=35.91 E-value=52 Score=27.81 Aligned_cols=13 Identities=38% Similarity=0.854 Sum_probs=11.1
Q ss_pred CcEEEeccCCcCc
Q 027178 26 ANITLLRGNHESR 38 (227)
Q Consensus 26 ~~v~lLRGNHE~~ 38 (227)
..+++++|||+..
T Consensus 90 ~~v~~V~GNHD~~ 102 (225)
T TIGR00024 90 RDLILIRGNHDAL 102 (225)
T ss_pred CcEEEECCCCCCc
Confidence 3699999999974
No 82
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=35.48 E-value=57 Score=27.64 Aligned_cols=53 Identities=11% Similarity=-0.015 Sum_probs=34.9
Q ss_pred ecChhhHHhhhhhcCceEEEeccceeecceeeEecCCeEEEEEcCCCCCccCCCcEEEEEEc
Q 027178 136 LFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFN 197 (227)
Q Consensus 136 ~fg~~~~~~fl~~~~l~~iIRgHe~~~~G~~~~~~~~~~iTifSa~~y~~~~~N~~avl~i~ 197 (227)
--|..++.+|+++.+=+++|.||=- .|.+. -|+.+-|.-.| +. ...+|++.++
T Consensus 165 h~GS~alr~~I~~~~P~l~i~GHih--~~~~~---~g~t~vvNpg~-~~---~g~~a~i~~~ 217 (224)
T cd07388 165 EQGSHEVAHLIKTHNPLVVLVGGKG--QKHEL---LGASWVVVPGD-LS---EGRYALLDLR 217 (224)
T ss_pred ccCHHHHHHHHHHhCCCEEEEcCCc--eeEEE---eCCEEEECCCc-cc---CCcEEEEEec
Confidence 5789999999999999999999543 44443 23444444333 21 2356777775
No 83
>PHA02546 47 endonuclease subunit; Provisional
Probab=35.19 E-value=47 Score=29.76 Aligned_cols=35 Identities=11% Similarity=0.190 Sum_probs=20.3
Q ss_pred cCCC-CCcHHHHHHHHH--HHH--hCCCcEEEeccCCcCc
Q 027178 4 RQIT-YLCLEVFTILLL--LKA--RYPANITLLRGNHESR 38 (227)
Q Consensus 4 vDRG-~~s~Evl~~L~~--LK~--~~P~~v~lLRGNHE~~ 38 (227)
.|+. ..+.+++.++.. ++. ..+-.|+++.|||+..
T Consensus 50 fD~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~I~GNHD~~ 89 (340)
T PHA02546 50 FDVRKAITQNTMNFVREKIFDLLKEAGITLHVLVGNHDMY 89 (340)
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHCCCeEEEEccCCCcc
Confidence 3553 445555444432 222 2345699999999974
No 84
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=34.40 E-value=67 Score=27.67 Aligned_cols=53 Identities=13% Similarity=0.046 Sum_probs=36.9
Q ss_pred cChhhHHhhhhhcCceEEEeccceeecceeeEecCCeEEEEEcCCCCC--ccCCCcEEEEEEcCCC
Q 027178 137 FGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYC--YRCGNVASILSFNENM 200 (227)
Q Consensus 137 fg~~~~~~fl~~~~l~~iIRgHe~~~~G~~~~~~~~~~iTifSa~~y~--~~~~N~~avl~i~~~~ 200 (227)
..++++.+-+++++++.+|-||.-.+..-.. ++ ..|+ |.--..+++++++++.
T Consensus 174 ~~~~~v~~~~~~~~vd~vI~GH~Hr~ai~~i---~~--------~~yi~lGdW~~~~s~~~v~~~~ 228 (237)
T COG2908 174 VNPAAVADEARRHGVDGVIHGHTHRPAIHNI---PG--------ITYINLGDWVSEGSILEVDDGG 228 (237)
T ss_pred hhHHHHHHHHHHcCCCEEEecCcccHhhccC---CC--------ceEEecCcchhcceEEEEecCc
Confidence 3566777889999999999999988766655 33 1221 1112568999998664
No 85
>smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.
Probab=31.91 E-value=84 Score=26.41 Aligned_cols=37 Identities=19% Similarity=0.246 Sum_probs=28.0
Q ss_pred hhhhhcCceEEEeccceeecceeeEecCCeEEEEEcCCCC
Q 027178 144 EFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNY 183 (227)
Q Consensus 144 ~fl~~~~l~~iIRgHe~~~~G~~~~~~~~~~iTifSa~~y 183 (227)
+.+-..|+++||-+|.-+..+++. + ++++| +||-=|+
T Consensus 199 ~~l~~~G~DvIiG~H~H~~~~~e~-~-~~~~I-~YslGNf 235 (239)
T smart00854 199 HALIDAGADVVIGHHPHVLQPIEI-Y-KGKLI-AYSLGNF 235 (239)
T ss_pred HHHHHcCCCEEEcCCCCcCCceEE-E-CCEEE-EEccccc
Confidence 334346999999999999999998 6 67766 6776444
No 86
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=31.13 E-value=79 Score=29.35 Aligned_cols=37 Identities=11% Similarity=0.014 Sum_probs=26.9
Q ss_pred ccCCCCCcHHHHHHHHHHHHh------------------------------------CCCcEEEeccCCcCcc
Q 027178 3 QRQITYLCLEVFTILLLLKAR------------------------------------YPANITLLRGNHESRQ 39 (227)
Q Consensus 3 ~vDRG~~s~Evl~~L~~LK~~------------------------------------~P~~v~lLRGNHE~~~ 39 (227)
+.|++.-|.+++..++.+-.+ ..--||.+-|||+...
T Consensus 52 LFd~~~Ps~~~~~~~~~~lr~~~~g~~p~~~~~Lsd~~~~~~~~~~~~~ny~d~~~~~~iPVf~I~GNHD~p~ 124 (405)
T TIGR00583 52 LFHENKPSRKSLYQVLRSLRLYCLGDKPCELEFLSDASVVFNQSAFGNVNYEDPNINVAIPVFSIHGNHDDPS 124 (405)
T ss_pred cCCCCCCCHHHHHHHHHHHHHhhccCCccchhhccchhhhcccccccccccccccccCCCCEEEEcCCCCCcc
Confidence 458889999988765554432 1225999999999975
No 87
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=30.30 E-value=1.2e+02 Score=25.27 Aligned_cols=26 Identities=12% Similarity=0.147 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHhCCCcEEEeccCCcCc
Q 027178 12 EVFTILLLLKARYPANITLLRGNHESR 38 (227)
Q Consensus 12 Evl~~L~~LK~~~P~~v~lLRGNHE~~ 38 (227)
++..+|-.|+.. +..|+.++||||..
T Consensus 56 ~~~~~l~~L~~~-~~~v~~v~GNHD~~ 81 (231)
T TIGR01854 56 SVAQAIRQVSDQ-GVPCYFMHGNRDFL 81 (231)
T ss_pred HHHHHHHHHHHC-CCeEEEEcCCCchh
Confidence 445556566543 34699999999973
No 88
>KOG3339 consensus Predicted glycosyltransferase [General function prediction only]
Probab=29.52 E-value=1.7e+02 Score=24.43 Aligned_cols=84 Identities=12% Similarity=0.128 Sum_probs=61.7
Q ss_pred CCCCCcHHHHHHHHHHHHhCCCcEEEeccCCcCccccccCCcH----------------HHHHHHhCChhHHHHHHHHHh
Q 027178 5 QITYLCLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFY----------------DECQRKYGNANAWRYCTDVFD 68 (227)
Q Consensus 5 DRG~~s~Evl~~L~~LK~~~P~~v~lLRGNHE~~~~~~~~gF~----------------~e~~~~~g~~~~~~~~~~~f~ 68 (227)
.-|-+.-|++-+|=+|+.+|-.+-++ -|+-+.++.++.-.|. .|..+.| -..+|..+..+.-
T Consensus 46 GSGGHT~EMlrLl~~l~~~y~~r~yI-~a~tD~mS~~k~~~F~~~~a~~~a~~~~ipRsReVgQS~-ltSv~Tti~all~ 123 (211)
T KOG3339|consen 46 GSGGHTGEMLRLLEALQDLYSPRSYI-AADTDEMSEQKARSFELSLAHCKAKNYEIPRSREVGQSW-LTSVFTTIWALLQ 123 (211)
T ss_pred cCCCcHHHHHHHHHHHHhhcCceEEE-EecCchhhHHHHHhhhccccccchhheecchhhhhhhhh-hhhHHHHHHHHHH
Confidence 56889999999999999999888776 7898888776544443 2233333 2568888888888
Q ss_pred hhhhheeecCeEEEeec-CcCCC
Q 027178 69 YLTLSAIIDGTVLCVHG-GLSPD 90 (227)
Q Consensus 69 ~LPlaaii~~~ilcvHg-Gi~~~ 90 (227)
++++...+-..++.+-| |-.-.
T Consensus 124 s~~lv~RirPdlil~NGPGTCv~ 146 (211)
T KOG3339|consen 124 SFVLVWRIRPDLILCNGPGTCVP 146 (211)
T ss_pred HheEEEecCCCEEEECCCCcEeH
Confidence 88888877766777777 65433
No 89
>COG1312 UxuA D-mannonate dehydratase [Carbohydrate transport and metabolism]
Probab=28.39 E-value=1.5e+02 Score=27.06 Aligned_cols=63 Identities=17% Similarity=0.329 Sum_probs=46.5
Q ss_pred HHHHHHhCC---hhHHHHHHHHHhh-hhhheeecCeEEEeec--------CcCCCCCCHhhhhhhhcccCCCCCCc
Q 027178 48 DECQRKYGN---ANAWRYCTDVFDY-LTLSAIIDGTVLCVHG--------GLSPDIRTIDQIRVIERNCEIPHEGP 111 (227)
Q Consensus 48 ~e~~~~~g~---~~~~~~~~~~f~~-LPlaaii~~~ilcvHg--------Gi~~~~~~l~~i~~i~r~~~~~~~~~ 111 (227)
.+..++|+. +.+|+.+..|.+. +|+|.-++= =+|+|- |+|+-+.+.+++..+-.-.+.|.+++
T Consensus 172 ~~~~~~y~~Id~~~L~~nL~yFL~~ViPVAEe~gV-kmaiHPDDPP~pi~GLpRIvst~ed~~~ll~~vdSp~NGi 246 (362)
T COG1312 172 RELLELYGGIDEEKLWENLAYFLKEVIPVAEEVGV-KMAIHPDDPPWPIFGLPRIVSTIEDYQRLLEMVDSPYNGI 246 (362)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHhhcchHHhcCc-eEEeCCCCCCccccCcchhcCCHHHHHHHHHhccCccCCE
Confidence 456677875 6899999999986 799988876 467897 55555667888887776666666643
No 90
>PF04021 Class_IIIsignal: Class III signal peptide; InterPro: IPR007166 This entry represents an amino terminal motif QXSXEXXXL thought to be part of a class III signal sequence for a family of archaeal proteins. The Q residue is the +1 residue of the signal peptidase cleavage site []. Two proteins containing this motif are cleaved by a type IV pilin-like signal peptidase.
Probab=27.41 E-value=46 Score=18.74 Aligned_cols=16 Identities=13% Similarity=0.183 Sum_probs=13.3
Q ss_pred CCCCcHHHHHHHHHHH
Q 027178 6 ITYLCLEVFTILLLLK 21 (227)
Q Consensus 6 RG~~s~Evl~~L~~LK 21 (227)
||+-|+|.+.++++.-
T Consensus 2 rGQ~SlE~~ili~~vl 17 (28)
T PF04021_consen 2 RGQISLEFIILIAAVL 17 (28)
T ss_pred ccHHhHHHHHHHHHHH
Confidence 8999999998887653
No 91
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=26.98 E-value=46 Score=28.05 Aligned_cols=14 Identities=29% Similarity=0.662 Sum_probs=11.6
Q ss_pred CcEEEeccCCcCcc
Q 027178 26 ANITLLRGNHESRQ 39 (227)
Q Consensus 26 ~~v~lLRGNHE~~~ 39 (227)
-.|+++.||||...
T Consensus 82 ~~v~~ipGNHD~~~ 95 (243)
T cd07386 82 IKIIIIPGNHDAVR 95 (243)
T ss_pred CeEEEeCCCCCccc
Confidence 46999999999853
No 92
>PRK03906 mannonate dehydratase; Provisional
Probab=24.89 E-value=1.5e+02 Score=27.28 Aligned_cols=63 Identities=10% Similarity=0.162 Sum_probs=43.9
Q ss_pred HHHHHHhCC---hhHHHHHHHHHhh-hhhheeecCeEEEeecC--------cCCCCCCHhhhhhhhcccCCCCCCc
Q 027178 48 DECQRKYGN---ANAWRYCTDVFDY-LTLSAIIDGTVLCVHGG--------LSPDIRTIDQIRVIERNCEIPHEGP 111 (227)
Q Consensus 48 ~e~~~~~g~---~~~~~~~~~~f~~-LPlaaii~~~ilcvHgG--------i~~~~~~l~~i~~i~r~~~~~~~~~ 111 (227)
.++...|.+ +++|+.+.++++. +|+|.-.+= .+|+|-- ++.-+.+.+++.++-.-.+.|..++
T Consensus 194 ~~~~~~y~~i~~e~lw~~l~~fL~~v~p~Aee~GV-~LaihPdDPp~~~~Gl~riv~t~~d~~rll~~v~Sp~~gl 268 (385)
T PRK03906 194 RALLELYKDIDEEKLRENLAYFLKAIIPVAEEVGV-KMAIHPDDPPRPIFGLPRIVSTEEDLQRLLDAVDSPANGL 268 (385)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcCC-EEEEeeCCccccccccCceeCCHHHHHHHHHhcCCCceeE
Confidence 445566754 6899999999986 588876665 7888973 4455568888887766555555443
No 93
>PF03113 RSV_NS2: Respiratory synctial virus non-structural protein NS2; InterPro: IPR004336 The molecular structure and function of the NS2 protein is not known. However, mutants lacking the NS2 grow at slower rates when compared to the wild-type yet NS2 is not essential for viral replication [].
Probab=23.48 E-value=1.7e+02 Score=21.65 Aligned_cols=73 Identities=21% Similarity=0.292 Sum_probs=46.1
Q ss_pred ccCCCCCcHHHHHHHHHHHHhCCCcEEEeccCCcCc--ccccc---CCcH----HHHHHHhCCh--hHHHHHHHHHhhhh
Q 027178 3 QRQITYLCLEVFTILLLLKARYPANITLLRGNHESR--QLTQV---YGFY----DECQRKYGNA--NAWRYCTDVFDYLT 71 (227)
Q Consensus 3 ~vDRG~~s~Evl~~L~~LK~~~P~~v~lLRGNHE~~--~~~~~---~gF~----~e~~~~~g~~--~~~~~~~~~f~~LP 71 (227)
+-|--+-|+|+...-+.-.+.--.-|+|+ |||+. .+++. +.|. -.+..+-|+. .-|.+++.-+..+|
T Consensus 15 i~dmrpls~et~i~sltk~iith~fiyli--nhecivrklderqatftflvnyemkllhkvgstky~kyteyn~kygtfp 92 (124)
T PF03113_consen 15 INDMRPLSIETIIISLTKDIITHTFIYLI--NHECIVRKLDERQATFTFLVNYEMKLLHKVGSTKYNKYTEYNTKYGTFP 92 (124)
T ss_pred eccCccceeeeehhhHHHhhhheeeEEEe--cccceeeehhcccceEEeehhhHHHHHHHhcccchhhhhhhhccccccc
Confidence 34666888888877666666666678888 99983 33332 2333 2356677663 45667777777777
Q ss_pred hheeec
Q 027178 72 LSAIID 77 (227)
Q Consensus 72 laaii~ 77 (227)
.-.-|+
T Consensus 93 mpifin 98 (124)
T PF03113_consen 93 MPIFIN 98 (124)
T ss_pred cceEEc
Confidence 554443
No 94
>PF10083 DUF2321: Uncharacterized protein conserved in bacteria (DUF2321); InterPro: IPR016891 This entry is represented by Bacteriophage 'Lactobacillus prophage Lj928', Orf-Ljo1454. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=22.81 E-value=26 Score=28.20 Aligned_cols=45 Identities=20% Similarity=0.369 Sum_probs=29.2
Q ss_pred ChhhHHhhhhhcCc---------eEEEeccceeecceeeEecCCeEEEEEcCCCCCccCCC
Q 027178 138 GSRVTSEFNHINNL---------DLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGN 189 (227)
Q Consensus 138 g~~~~~~fl~~~~l---------~~iIRgHe~~~~G~~~~~~~~~~iTifSa~~y~~~~~N 189 (227)
+++..++||.+.|- +.=|||+-.++..+.+. +=+.+|.||.+++.
T Consensus 23 ~p~~~~~fC~kCG~~tI~~Cp~C~~~IrG~y~v~gv~~~g-------~~~~~PsYC~~CGk 76 (158)
T PF10083_consen 23 NPELREKFCSKCGAKTITSCPNCSTPIRGDYHVEGVFGLG-------GHYEAPSYCHNCGK 76 (158)
T ss_pred CchHHHHHHHHhhHHHHHHCcCCCCCCCCceecCCeeeeC-------CCCCCChhHHhCCC
Confidence 44566777777665 45589988775555441 12459999987764
No 95
>TIGR00695 uxuA mannonate dehydratase. This Fe2+-requiring enzyme plays a role in D-glucuronate catabolism in Escherichia coli. Mannonate dehydratase converts D-mannonate to 2-dehydro-3-deoxy-D-gluconate. An apparent equivalog is found in a glucuronate utilization operon in Bacillus stearothermophilus T-6.
Probab=21.74 E-value=2.2e+02 Score=26.38 Aligned_cols=62 Identities=16% Similarity=0.229 Sum_probs=44.9
Q ss_pred HHHHHhCC---hhHHHHHHHHHhh-hhhheeecCeEEEeec--------CcCCCCCCHhhhhhhhcccCCCCCCc
Q 027178 49 ECQRKYGN---ANAWRYCTDVFDY-LTLSAIIDGTVLCVHG--------GLSPDIRTIDQIRVIERNCEIPHEGP 111 (227)
Q Consensus 49 e~~~~~g~---~~~~~~~~~~f~~-LPlaaii~~~ilcvHg--------Gi~~~~~~l~~i~~i~r~~~~~~~~~ 111 (227)
++...|.+ +++|+.+..|.+. +|.|--.+= -+|+|- |+|.-+.+.+++.++-.-.+.|.+++
T Consensus 195 ~~~~~y~~i~~e~lwenl~yFL~~ViPvAEe~GV-~LAiHPDDPP~~i~GlpRIvst~ed~~rll~~V~SpanGl 268 (394)
T TIGR00695 195 ELLAAYKDIDEEKLRDNLAFFLQEILPVAEEYGV-QMAIHPDDPPRPILGLPRIVSTIEDMQWLVATSDSPANGF 268 (394)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcCC-EEEECCCCCCccccCCCcccCCHHHHHHHHHhcCCccccE
Confidence 45566754 6899999999986 688876655 677887 55555668888888776666666654
No 96
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=21.18 E-value=3.3e+02 Score=22.72 Aligned_cols=28 Identities=18% Similarity=0.186 Sum_probs=19.3
Q ss_pred cHHHHHHHHHHHHhCCCcEEEeccCCcCc
Q 027178 10 CLEVFTILLLLKARYPANITLLRGNHESR 38 (227)
Q Consensus 10 s~Evl~~L~~LK~~~P~~v~lLRGNHE~~ 38 (227)
..+++.+|-.|+.. .-.|++++||||..
T Consensus 56 ~~~~~~~l~~l~~~-g~~v~~v~GNHD~~ 83 (241)
T PRK05340 56 AREIAAALKALSDS-GVPCYFMHGNRDFL 83 (241)
T ss_pred HHHHHHHHHHHHHc-CCeEEEEeCCCchh
Confidence 44666666666543 23599999999973
No 97
>PF03786 UxuA: D-mannonate dehydratase (UxuA); InterPro: IPR004628 This Fe2+-requiring enzyme plays a role in D-glucuronate catabolism in Escherichia coli. Mannonate dehydratase converts D-mannonate to 2-dehydro-3-deoxy-D-gluconate. An apparent equivalog is found in a glucuronate utilization operon in Bacillus stearothermophilus T-6.; GO: 0008927 mannonate dehydratase activity, 0006064 glucuronate catabolic process; PDB: 1TZ9_A 3FVM_A 3BDK_B 3BAN_B 3DBN_B.
Probab=20.10 E-value=2e+02 Score=26.34 Aligned_cols=84 Identities=20% Similarity=0.291 Sum_probs=46.1
Q ss_pred HHhCCCcEEEeccCCcCccccccCCcHHHHHHHhCC---hhHHHHHHHHHhh-hhhheeecCeEEEeec--------CcC
Q 027178 21 KARYPANITLLRGNHESRQLTQVYGFYDECQRKYGN---ANAWRYCTDVFDY-LTLSAIIDGTVLCVHG--------GLS 88 (227)
Q Consensus 21 K~~~P~~v~lLRGNHE~~~~~~~~gF~~e~~~~~g~---~~~~~~~~~~f~~-LPlaaii~~~ilcvHg--------Gi~ 88 (227)
|..-...-+-|.|.-+.. +. . ..+....|+. +++|+.+..|.+. +|.|--.+= -+|+|= |+|
T Consensus 144 ~~~~a~~~~~lPg~~~~~-~~---~-~~~~l~~y~~i~~e~lw~nl~yFL~~v~PvAEe~gV-~laiHPDDPP~~~~Glp 217 (351)
T PF03786_consen 144 KRPGAEADYTLPGWEEEY-LE---E-FRELLAAYGGIDEEQLWENLKYFLEAVIPVAEEAGV-KLAIHPDDPPWPLFGLP 217 (351)
T ss_dssp HHT------------CCC-HH---H-HHHHHHHCCT--HHHHHHHHHHHHHHHHHHHHHCT--EEEEE--SSSS-BTTB-
T ss_pred hccccccCCCCCCCChHH-HH---H-HHHHHHHhcCCCHHHHHHHHHHHHHhhhHHHHHhCC-EEEeCCCCCCCccCCCC
Confidence 444445556678877764 21 1 1344567765 6899999999996 798876655 678884 777
Q ss_pred CCCCCHhhhhhhhcccCCCCCC
Q 027178 89 PDIRTIDQIRVIERNCEIPHEG 110 (227)
Q Consensus 89 ~~~~~l~~i~~i~r~~~~~~~~ 110 (227)
+-+.+.++++++-.-.+.|.++
T Consensus 218 Ri~~~~e~~~~~~~~~~Sp~nG 239 (351)
T PF03786_consen 218 RIVSTAEDLKRILDLVDSPANG 239 (351)
T ss_dssp --TTSHHHHHHHHHCT-STTEE
T ss_pred cccCCHHHHHHHHHhCCCcccc
Confidence 7777888888877655555554
Done!