Your job contains 1 sequence.
>027180
MLYALSAPKTCISCPRGPPFPQKRQVSTRLCVHASLPADNGGFKVEYTPWLIVGLGNPGI
KYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESI
YDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPGKMDMKAYLLQ
KFSPIEREQIDAALEQGVEAVRTLVLNGFDQNISRFNMGQKYKYHAV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 027180
(227 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2173298 - symbol:AT5G38290 species:3702 "Arabi... 435 8.3e-81 2
TAIR|locus:2181412 - symbol:AT5G16140 species:3702 "Arabi... 442 8.5e-77 2
TAIR|locus:2183234 - symbol:AT5G19830 species:3702 "Arabi... 315 2.3e-52 2
TAIR|locus:2014134 - symbol:AT1G18440 species:3702 "Arabi... 276 6.8e-51 2
TIGR_CMR|CHY_0196 - symbol:CHY_0196 "peptidyl-tRNA hydrol... 261 1.6e-22 1
TIGR_CMR|VC_2184 - symbol:VC_2184 "peptidyl-tRNA hydrolas... 170 1.8e-22 2
UNIPROTKB|P0A7D1 - symbol:pth "peptidyl-tRNA hydrolase" s... 145 1.7e-20 2
TIGR_CMR|SO_1184 - symbol:SO_1184 "peptidyl-tRNA hydrolas... 155 2.2e-20 2
TIGR_CMR|APH_1301 - symbol:APH_1301 "peptidyl-tRNA hydrol... 160 3.9e-19 2
TIGR_CMR|ECH_0141 - symbol:ECH_0141 "peptidyl-tRNA hydrol... 144 1.3e-18 2
TIGR_CMR|BA_0050 - symbol:BA_0050 "peptidyl-tRNA hydrolas... 221 2.8e-18 1
TIGR_CMR|CPS_3559 - symbol:CPS_3559 "peptidyl-tRNA hydrol... 134 1.1e-17 2
TIGR_CMR|CJE_0357 - symbol:CJE_0357 "peptidyl-tRNA hydrol... 209 5.3e-17 1
UNIPROTKB|P65865 - symbol:pth "Peptidyl-tRNA hydrolase" s... 204 1.8e-16 1
TIGR_CMR|CBU_1841 - symbol:CBU_1841 "peptidyl-tRNA hydrol... 199 6.0e-16 1
TIGR_CMR|GSU_0663 - symbol:GSU_0663 "peptidyl-tRNA hydrol... 193 2.6e-15 1
TIGR_CMR|SPO_0811 - symbol:SPO_0811 "peptidyl-tRNA hydrol... 182 3.8e-14 1
TIGR_CMR|DET_0595 - symbol:DET_0595 "peptidyl-tRNA hydrol... 172 4.4e-13 1
UNIPROTKB|E2RR88 - symbol:PTRH1 "Uncharacterized protein"... 113 1.1e-12 2
DICTYBASE|DDB_G0280507 - symbol:DDB_G0280507 "Peptidyl-tR... 111 3.0e-10 2
TIGR_CMR|NSE_0307 - symbol:NSE_0307 "peptidyl-tRNA hydrol... 143 5.2e-10 1
SGD|S000001232 - symbol:PTH1 "One of two mitochondrially-... 92 3.3e-08 2
CGD|CAL0004445 - symbol:orf19.4740 species:5476 "Candida ... 132 3.4e-07 1
UNIPROTKB|E1BK88 - symbol:PTRH1 "Uncharacterized protein"... 132 4.0e-07 1
RGD|1310165 - symbol:Ptrh1 "peptidyl-tRNA hydrolase 1 hom... 130 5.7e-07 1
UNIPROTKB|F1RS14 - symbol:PTRH1 "Uncharacterized protein"... 127 1.3e-06 1
UNIPROTKB|F1RS13 - symbol:PTRH1 "Uncharacterized protein"... 127 1.7e-06 1
UNIPROTKB|C9J7Z1 - symbol:PTRH1 "Probable peptidyl-tRNA h... 121 3.5e-06 1
MGI|MGI:1913779 - symbol:Ptrh1 "peptidyl-tRNA hydrolase 1... 122 6.1e-06 1
UNIPROTKB|Q86Y79 - symbol:PTRH1 "Probable peptidyl-tRNA h... 121 1.0e-05 1
POMBASE|SPBC2D10.15c - symbol:pth1 "mitochondrial peptidy... 118 2.1e-05 1
ZFIN|ZDB-GENE-050306-33 - symbol:ptrh1 "peptidyl-tRNA hyd... 113 0.00019 1
>TAIR|locus:2173298 [details] [associations]
symbol:AT5G38290 species:3702 "Arabidopsis thaliana"
[GO:0004045 "aminoacyl-tRNA hydrolase activity" evidence=IEA;ISS]
[GO:0006412 "translation" evidence=ISS] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0006783 "heme biosynthetic process" evidence=RCA]
[GO:0009965 "leaf morphogenesis" evidence=RCA] [GO:0016556 "mRNA
modification" evidence=RCA] [GO:0030154 "cell differentiation"
evidence=RCA] InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195
PROSITE:PS01195 PROSITE:PS01196 HAMAP:MF_00083 EMBL:CP002688
GO:GO:0004045 HOGENOM:HOG000004797 KO:K01056
ProtClustDB:CLSN2686133 Gene3D:3.40.50.1470 PANTHER:PTHR17224
SUPFAM:SSF53178 TIGRFAMs:TIGR00447 EMBL:AB011481 IPI:IPI00516328
RefSeq:NP_974860.1 UniGene:At.30420 ProteinModelPortal:A8MQQ3
SMR:A8MQQ3 STRING:A8MQQ3 PRIDE:A8MQQ3 EnsemblPlants:AT5G38290.2
GeneID:833811 KEGG:ath:AT5G38290 OMA:FEMIDHI Genevestigator:A8MQQ3
Uniprot:A8MQQ3
Length = 250
Score = 435 (158.2 bits), Expect = 8.3e-81, Sum P(2) = 8.3e-81
Identities = 79/108 (73%), Positives = 91/108 (84%)
Query: 120 IYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPGKMDMKAYLL 179
IYD+M L NGVLRLQPKGGH HNGLK+V HL+GCR +PRL IGIGNPPG MDMKA+LL
Sbjct: 143 IYDDMGLSNGVLRLQPKGGHSQHNGLKNVTEHLNGCRGYPRLSIGIGNPPGNMDMKAFLL 202
Query: 180 QKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNISRFNMGQKYKYHAV 227
QKFSP+ER+Q+D LEQGVE V+TLV GF +ISRFN+GQKYK+H V
Sbjct: 203 QKFSPLERKQMDEGLEQGVEGVKTLVEEGFSDSISRFNLGQKYKFHKV 250
Score = 395 (144.1 bits), Expect = 8.3e-81, Sum P(2) = 8.3e-81
Identities = 80/122 (65%), Positives = 93/122 (76%)
Query: 1 MLYALSAPKTCISCPRGPPFPQKRQVSTRLC-VHASLP-ADNGGFKVEYTPWLIVGLGNP 58
M A S+P T P+ F Q + S R + ASLP +DN K EYTPWLIVGLGNP
Sbjct: 5 MFCASSSPITSPLYPKAYKFSQTKSNSKRFSSLRASLPVSDNKLLKFEYTPWLIVGLGNP 64
Query: 59 GIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGE 118
G+KY+GTRHN+GFEMIDHIA+A I+MNTIQSKAL+GIGS+GEVPILL KPQ YMNFSGE
Sbjct: 65 GLKYYGTRHNIGFEMIDHIARATDISMNTIQSKALVGIGSVGEVPILLVKPQGYMNFSGE 124
Query: 119 SI 120
S+
Sbjct: 125 SV 126
>TAIR|locus:2181412 [details] [associations]
symbol:AT5G16140 species:3702 "Arabidopsis thaliana"
[GO:0004045 "aminoacyl-tRNA hydrolase activity" evidence=IEA;ISS]
[GO:0006412 "translation" evidence=ISS] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0006783 "heme biosynthetic process" evidence=RCA]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195
PROSITE:PS01196 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009570 GO:GO:0008380 GO:GO:0006397 GO:GO:0030529
GO:GO:0004045 EMBL:AL391148 EMBL:BT010650 EMBL:AK175292
IPI:IPI00533319 PIR:T51484 RefSeq:NP_001078593.1 RefSeq:NP_197118.1
UniGene:At.31709 HSSP:P0A7D1 ProteinModelPortal:Q9LF14 SMR:Q9LF14
STRING:Q9LF14 PRIDE:Q9LF14 EnsemblPlants:AT5G16140.1
EnsemblPlants:AT5G16140.2 GeneID:831471 KEGG:ath:AT5G16140
GeneFarm:2616 TAIR:At5g16140 eggNOG:COG0193 HOGENOM:HOG000004797
InParanoid:Q9LF14 KO:K01056 OMA:SEFINDF PhylomeDB:Q9LF14
ProtClustDB:CLSN2686133 Genevestigator:Q9LF14 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 TIGRFAMs:TIGR00447 Uniprot:Q9LF14
Length = 240
Score = 442 (160.7 bits), Expect = 8.5e-77, Sum P(2) = 8.5e-77
Identities = 83/108 (76%), Positives = 95/108 (87%)
Query: 120 IYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPGKMDMKAYLL 179
IYDEM+L NGVLRLQPKGG G+HNG+KSVM HLDG R FPRL IGIG PPG MDMKA+LL
Sbjct: 133 IYDEMALPNGVLRLQPKGGQGYHNGVKSVMGHLDGRRNFPRLSIGIGKPPGNMDMKAFLL 192
Query: 180 QKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNISRFNMGQKYKYHAV 227
QKFSP+E++QI+ ALEQG EAV+TLVLNGF+Q ISRFN+ QKYK+H V
Sbjct: 193 QKFSPLEQKQIEEALEQGSEAVKTLVLNGFNQGISRFNLVQKYKFHKV 240
Score = 350 (128.3 bits), Expect = 8.5e-77, Sum P(2) = 8.5e-77
Identities = 70/100 (70%), Positives = 80/100 (80%)
Query: 21 PQKRQVSTRLCVHASLPADNGGFKVEYTPWLIVGLGNPGIKYHGTRHNVGFEMIDHIAQA 80
P R+ R+C S D+ FKVEYTPWLIVGLGNPG KYHGTRHNVGFEMID +A+
Sbjct: 18 PVFRKQRFRVCSSTSGGEDDR-FKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDVLARK 76
Query: 81 QRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESI 120
+ + MNTIQSKALIGIG+I +VPILLAKPQ YMNFSGES+
Sbjct: 77 EGVLMNTIQSKALIGIGAIEDVPILLAKPQTYMNFSGESV 116
>TAIR|locus:2183234 [details] [associations]
symbol:AT5G19830 species:3702 "Arabidopsis thaliana"
[GO:0004045 "aminoacyl-tRNA hydrolase activity" evidence=IEA;ISS]
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0006412 "translation"
evidence=ISS] [GO:0006783 "heme biosynthetic process" evidence=RCA]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195
PROSITE:PS01196 GO:GO:0005739 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0008380 GO:GO:0006397 GO:GO:0030529
GO:GO:0004045 HSSP:P0A7D1 eggNOG:COG0193 HOGENOM:HOG000004797
KO:K01056 Gene3D:3.40.50.1470 PANTHER:PTHR17224 SUPFAM:SSF53178
TIGRFAMs:TIGR00447 EMBL:AF296838 EMBL:BT011605 EMBL:BT012252
EMBL:AK227887 IPI:IPI00521866 RefSeq:NP_197484.4 UniGene:At.31249
ProteinModelPortal:Q6NLS8 SMR:Q6NLS8 STRING:Q6NLS8
EnsemblPlants:AT5G19830.1 GeneID:832103 KEGG:ath:AT5G19830
TAIR:At5g19830 InParanoid:Q6NLS8 OMA:FRKNREF PhylomeDB:Q6NLS8
ProtClustDB:CLSN2681642 Genevestigator:Q6NLS8 Uniprot:Q6NLS8
Length = 219
Score = 315 (115.9 bits), Expect = 2.3e-52, Sum P(2) = 2.3e-52
Identities = 62/105 (59%), Positives = 79/105 (75%)
Query: 120 IYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPGKMDMKAYLL 179
++D+M L GVLRLQ KGGHG HNGLKSVMNH G REF RL IGIG PPG+MD KA+LL
Sbjct: 106 VHDDMQLPCGVLRLQEKGGHGCHNGLKSVMNHFRGNREFARLRIGIGKPPGQMDPKAFLL 165
Query: 180 QKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNISRFNMGQKYKY 224
QKFS RE++D AL +GV+A++ ++ F ++ FN+ QKYK+
Sbjct: 166 QKFSMPARERMDKALAEGVDALKLVLAKDFGESWRLFNVEQKYKH 210
Score = 245 (91.3 bits), Expect = 2.3e-52, Sum P(2) = 2.3e-52
Identities = 43/73 (58%), Positives = 56/73 (76%)
Query: 47 YTPWLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILL 106
+ PWL +GLGNPG KY GTRHN+GFEMID A++ I MN + KA++G G + ++P++L
Sbjct: 16 HRPWLFLGLGNPGDKYKGTRHNIGFEMIDVFAESVGIQMNLVNFKAIMGQGFVADLPVIL 75
Query: 107 AKPQAYMNFSGES 119
AKPQ YMN SGES
Sbjct: 76 AKPQTYMNLSGES 88
>TAIR|locus:2014134 [details] [associations]
symbol:AT1G18440 species:3702 "Arabidopsis thaliana"
[GO:0004045 "aminoacyl-tRNA hydrolase activity" evidence=IEA;ISS]
[GO:0006412 "translation" evidence=ISS] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0006783 "heme biosynthetic process"
evidence=RCA] InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195
PROSITE:PS01195 PROSITE:PS01196 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009507 GO:GO:0009570 EMBL:AC013354
GO:GO:0004045 PIR:C86318 HSSP:P0A7D1 eggNOG:COG0193
HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 TIGRFAMs:TIGR00447 EMBL:AK119054
EMBL:BT005284 IPI:IPI00539130 RefSeq:NP_173279.2 UniGene:At.22357
ProteinModelPortal:Q8GW64 SMR:Q8GW64 STRING:Q8GW64 PaxDb:Q8GW64
PRIDE:Q8GW64 EnsemblPlants:AT1G18440.1 GeneID:838424
KEGG:ath:AT1G18440 TAIR:At1g18440 InParanoid:Q8GW64 OMA:VINWVLK
PhylomeDB:Q8GW64 ProtClustDB:CLSN2918163 Genevestigator:Q8GW64
Uniprot:Q8GW64
Length = 288
Score = 276 (102.2 bits), Expect = 6.8e-51, Sum P(2) = 6.8e-51
Identities = 50/72 (69%), Positives = 59/72 (81%)
Query: 49 PWLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAK 108
PWLIVGLGNPG KY GTRHNVGFEM+D +A A+ I+MNT+ KAL G G IG +PI+LAK
Sbjct: 94 PWLIVGLGNPGKKYQGTRHNVGFEMVDALADAEGISMNTVNFKALFGKGVIGNIPIMLAK 153
Query: 109 PQAYMNFSGESI 120
PQ +MN SGES+
Sbjct: 154 PQTFMNLSGESV 165
Score = 270 (100.1 bits), Expect = 6.8e-51, Sum P(2) = 6.8e-51
Identities = 48/98 (48%), Positives = 73/98 (74%)
Query: 120 IYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPGKMDMKAYLL 179
+YD++ L G LRL PKGGHG HNG++S+++ L G R+FPRL IGIG PPGKMD ++L
Sbjct: 182 VYDDLDLPFGKLRLLPKGGHGGHNGMRSIIDRLKGSRDFPRLRIGIGRPPGKMDTANFVL 241
Query: 180 QKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNISRFN 217
++F+ E+E++D + G+EA+R L+L GF+++ + N
Sbjct: 242 RQFNRQEQEELDHTFQTGLEAIRILLLEGFNKSATFVN 279
>TIGR_CMR|CHY_0196 [details] [associations]
symbol:CHY_0196 "peptidyl-tRNA hydrolase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0004045
"aminoacyl-tRNA hydrolase activity" evidence=ISS] [GO:0006412
"translation" evidence=ISS] InterPro:IPR001328 InterPro:IPR018171
Pfam:PF01195 PROSITE:PS01195 PROSITE:PS01196 HAMAP:MF_00083
GO:GO:0005737 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0004045
eggNOG:COG0193 HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 TIGRFAMs:TIGR00447
ProtClustDB:PRK05426 EMBL:AF244580 RefSeq:YP_359068.1
ProteinModelPortal:Q9F8Q3 STRING:Q9F8Q3 GeneID:3726668
KEGG:chy:CHY_0196 PATRIC:21273573 OMA:IKFKTGG
BioCyc:CHYD246194:GJCN-197-MONOMER Uniprot:Q9F8Q3
Length = 187
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 68/186 (36%), Positives = 100/186 (53%)
Query: 50 WLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKP 109
++I GLGNPG +Y TRHN GF ++D +A+ I + + K+L+G G I V +LL KP
Sbjct: 2 FIIAGLGNPGQEYENTRHNAGFMVVDELAKKHGILITKRKFKSLVGEGEILGVKVLLLKP 61
Query: 110 QAYMNFSGESIYDEMSLMNGVL-RLQ--------PKGG-----HGHHNGLKSVMNHLD-- 153
Q YMN SG ++ + +S L RL P G G G + + + +
Sbjct: 62 QTYMNLSGTAVQEAVSFYKLPLSRLVVVYDDLDLPLGKIRLRLKGSAGGHRGMGSIISCL 121
Query: 154 GCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNI 213
G E PRL IGIG P D+K Y+LQ F+ ERE ++ L+ EA+ + GF++ +
Sbjct: 122 GSEEIPRLKIGIGRP-AVGDVKDYVLQPFTGAEREILEPTLKLAAEAITVALTEGFNKAM 180
Query: 214 SRFNMG 219
+ FN G
Sbjct: 181 TDFNRG 186
>TIGR_CMR|VC_2184 [details] [associations]
symbol:VC_2184 "peptidyl-tRNA hydrolase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004045 "aminoacyl-tRNA
hydrolase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195
PROSITE:PS01195 PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0004045
eggNOG:COG0193 KO:K01056 Gene3D:3.40.50.1470 PANTHER:PTHR17224
SUPFAM:SSF53178 TIGRFAMs:TIGR00447 ProtClustDB:PRK05426 OMA:IKFKTGG
PIR:C82107 RefSeq:NP_231815.1 ProteinModelPortal:Q9KQ21 SMR:Q9KQ21
DNASU:2613320 GeneID:2613320 KEGG:vch:VC2184 PATRIC:20083381
Uniprot:Q9KQ21
Length = 196
Score = 170 (64.9 bits), Expect = 1.8e-22, Sum P(2) = 1.8e-22
Identities = 36/97 (37%), Positives = 58/97 (59%)
Query: 121 YDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPGKMDMKAYLLQ 180
+DE+ L GV + + GGHG HNGLK ++ L +EF RL +GIG+P K + Y+L
Sbjct: 95 HDELDLPPGVAKFKQGGGHGGHNGLKDTISKLGNNKEFYRLRLGIGHPGHKDKVAGYVLG 154
Query: 181 KFSPIEREQIDAALEQGVEAVRTLVLNGFDQNISRFN 217
K E+E +DAA+++ V + L+ +G + +R +
Sbjct: 155 KAPAKEQECLDAAVDESVRCLEILMKDGLTKAQNRLH 191
Score = 105 (42.0 bits), Expect = 1.8e-22, Sum P(2) = 1.8e-22
Identities = 24/71 (33%), Positives = 39/71 (54%)
Query: 51 LIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAM-NTIQSKALIGIGSIGEVPILLAKP 109
L+VGL NPG +Y TRHN G +++ +A+ + + N + L G I + + P
Sbjct: 7 LLVGLANPGPEYAKTRHNAGAWVVEELARIHNVTLKNEPKFFGLTGRLLINSQELRVLIP 66
Query: 110 QAYMNFSGESI 120
+MN SG++I
Sbjct: 67 TTFMNLSGKAI 77
>UNIPROTKB|P0A7D1 [details] [associations]
symbol:pth "peptidyl-tRNA hydrolase" species:83333
"Escherichia coli K-12" [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=IDA;IMP]
[GO:0004045 "aminoacyl-tRNA hydrolase activity" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR001328
InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195 PROSITE:PS01196
HAMAP:MF_00083 GO:GO:0005737 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0006515
GO:GO:0004045 eggNOG:COG0193 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 TIGRFAMs:TIGR00447
HOGENOM:HOG000004796 EMBL:X61941 ProtClustDB:PRK05426 OMA:IKFKTGG
PIR:S16753 RefSeq:NP_415722.1 RefSeq:YP_489471.1 PDB:2PTH PDB:3VJR
PDBsum:2PTH PDBsum:3VJR ProteinModelPortal:P0A7D1 SMR:P0A7D1
DIP:DIP-35932N IntAct:P0A7D1 MINT:MINT-1225563 PRIDE:P0A7D1
EnsemblBacteria:EBESCT00000000501 EnsemblBacteria:EBESCT00000017627
GeneID:12933876 GeneID:945765 KEGG:ecj:Y75_p1176 KEGG:eco:b1204
PATRIC:32117660 EchoBASE:EB0778 EcoGene:EG10785
BioCyc:EcoCyc:EG10785-MONOMER BioCyc:ECOL316407:JW1195-MONOMER
BioCyc:MetaCyc:EG10785-MONOMER SABIO-RK:P0A7D1
EvolutionaryTrace:P0A7D1 Genevestigator:P0A7D1 Uniprot:P0A7D1
Length = 194
Score = 145 (56.1 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 32/97 (32%), Positives = 52/97 (53%)
Query: 121 YDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPGKMDMKAYLLQ 180
+DE+ L GV + + GGHG HNGLK +++ L F RL IGIG+P K + ++L
Sbjct: 93 HDELDLPPGVAKFKLGGGHGGHNGLKDIISKLGNNPNFHRLRIGIGHPGDKNKVVGFVLG 152
Query: 181 KFSPIEREQIDAALEQGVEAVRTLVLNGFDQNISRFN 217
K E++ ID A+++ +G + +R +
Sbjct: 153 KPPVSEQKLIDEAIDEAARCTEMWFTDGLTKATNRLH 189
Score = 111 (44.1 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 30/88 (34%), Positives = 45/88 (51%)
Query: 51 LIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGS---IGEVPILLA 107
LIVGL NPG +Y TRHN G +D +A+ R + ++K G S +G + L
Sbjct: 5 LIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLRE-EAK-FFGYTSRVTLGGEDVRLL 62
Query: 108 KPQAYMNFSGESIYDEMSLMNGVLRLQP 135
P +MN SG+++ + M R+ P
Sbjct: 63 VPTTFMNLSGKAV----AAMASFFRINP 86
>TIGR_CMR|SO_1184 [details] [associations]
symbol:SO_1184 "peptidyl-tRNA hydrolase" species:211586
"Shewanella oneidensis MR-1" [GO:0004045 "aminoacyl-tRNA hydrolase
activity" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195
PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0004045 eggNOG:COG0193 KO:K01056
Gene3D:3.40.50.1470 PANTHER:PTHR17224 SUPFAM:SSF53178
TIGRFAMs:TIGR00447 HOGENOM:HOG000004796 ProtClustDB:PRK05426
OMA:IKFKTGG RefSeq:NP_716809.1 ProteinModelPortal:Q8EHN5 SMR:Q8EHN5
GeneID:1169013 KEGG:son:SO_1184 PATRIC:23522008 Uniprot:Q8EHN5
Length = 195
Score = 155 (59.6 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
Identities = 33/84 (39%), Positives = 50/84 (59%)
Query: 121 YDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPGKMDMKAYLLQ 180
+DE+ + GV + + GGHG HNGLK ++ L + F RL IGIG+P K + Y+L
Sbjct: 94 HDELDMPPGVAKFKLGGGHGGHNGLKDIIAKLANDKNFYRLRIGIGHPGDKNKVSGYVLG 153
Query: 181 KFSPIEREQIDAALEQGVEAVRTL 204
K E+E I+AA+++ V + L
Sbjct: 154 KAPAKEQELINAAVDEAVRSTEIL 177
Score = 100 (40.3 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
Identities = 25/72 (34%), Positives = 38/72 (52%)
Query: 51 LIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSK--ALIGIGSIGEVPILLAK 108
LIVGL NPG +Y TRHN G ++ +A+ +++ SK L + + L
Sbjct: 6 LIVGLANPGAEYVQTRHNAGAWYVEELARICGVSL-VADSKYFGLTARAVLHGKDVRLLI 64
Query: 109 PQAYMNFSGESI 120
P YMN SG+++
Sbjct: 65 PTTYMNLSGKAV 76
>TIGR_CMR|APH_1301 [details] [associations]
symbol:APH_1301 "peptidyl-tRNA hydrolase" species:212042
"Anaplasma phagocytophilum HZ" [GO:0004045 "aminoacyl-tRNA
hydrolase activity" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195
PROSITE:PS01195 PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737
EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0004045
eggNOG:COG0193 HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 TIGRFAMs:TIGR00447
RefSeq:YP_505815.1 ProteinModelPortal:Q2GII6 STRING:Q2GII6
GeneID:3930906 KEGG:aph:APH_1301 PATRIC:20951398 OMA:GDESGFM
ProtClustDB:PRK05426 BioCyc:APHA212042:GHPM-1303-MONOMER
Uniprot:Q2GII6
Length = 183
Score = 160 (61.4 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
Identities = 34/70 (48%), Positives = 45/70 (64%)
Query: 51 LIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQ 110
L+VGLGNPG +Y TRHNVGF +ID +A+ + AL+ IG+IG ++L KP
Sbjct: 3 LLVGLGNPGKRYAETRHNVGFMIIDAVARGFFFPEFCSKHDALVSIGNIGTHRVMLMKPL 62
Query: 111 AYMNFSGESI 120
YMN SG S+
Sbjct: 63 LYMNRSGTSV 72
Score = 83 (34.3 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
Identities = 25/88 (28%), Positives = 46/88 (52%)
Query: 121 YDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPGKMDMKAYLLQ 180
+D++ L G +R++ GG G HNGL+S+ + + + + R+ G+G ++ Y+L
Sbjct: 90 HDDVELQPGTIRVKLGGGSGGHNGLRSIDSAIG--KAYWRVRFGVGRAE-LCNLSDYVLS 146
Query: 181 KFSPIEREQIDAALEQGVEAVRTLVLNG 208
F I Q+ L V A ++L+G
Sbjct: 147 DFENIA--QV-TDLVNSVAANLQMLLDG 171
>TIGR_CMR|ECH_0141 [details] [associations]
symbol:ECH_0141 "peptidyl-tRNA hydrolase" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0004045 "aminoacyl-tRNA
hydrolase activity" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195
PROSITE:PS01195 PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737
EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0004045
eggNOG:COG0193 HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 TIGRFAMs:TIGR00447
ProtClustDB:PRK05426 RefSeq:YP_506969.1 ProteinModelPortal:Q2GHW4
STRING:Q2GHW4 GeneID:3927185 KEGG:ech:ECH_0141 PATRIC:20575827
OMA:YVLKPPR BioCyc:ECHA205920:GJNR-141-MONOMER Uniprot:Q2GHW4
Length = 198
Score = 144 (55.7 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 33/77 (42%), Positives = 43/77 (55%)
Query: 50 WLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKP 109
+L+ GLGNPG KY +RHN GF ++D IA + ALI IG+I ++L KP
Sbjct: 3 YLLAGLGNPGKKYELSRHNAGFMIVDAIASEFYFPSFRERHNALISIGNIKSHRVILVKP 62
Query: 110 QAYMNFSGESIYDEMSL 126
+MN SG I SL
Sbjct: 63 WTFMNNSGAPIMSIASL 79
Score = 99 (39.9 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 24/70 (34%), Positives = 41/70 (58%)
Query: 121 YDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPGK----MDMKA 176
+DE+ + +R++ GG+ HNGLKS+ N L +++ R+ GIG P K +D+
Sbjct: 91 HDEVEINFCTIRVKKSGGNAGHNGLKSIDNLLG--KDYWRVRFGIGRPINKTNLKIDLSY 148
Query: 177 YLLQKFSPIE 186
Y+L +F I+
Sbjct: 149 YVLSQFHNIK 158
>TIGR_CMR|BA_0050 [details] [associations]
symbol:BA_0050 "peptidyl-tRNA hydrolase" species:198094
"Bacillus anthracis str. Ames" [GO:0004045 "aminoacyl-tRNA
hydrolase activity" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195
PROSITE:PS01195 PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0004045
eggNOG:COG0193 HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 TIGRFAMs:TIGR00447
ProtClustDB:PRK05426 RefSeq:NP_842619.1 RefSeq:YP_016653.1
RefSeq:YP_026337.1 ProteinModelPortal:Q81VY9 DNASU:1087397
EnsemblBacteria:EBBACT00000008195 EnsemblBacteria:EBBACT00000017228
EnsemblBacteria:EBBACT00000022310 GeneID:1087397 GeneID:2819040
GeneID:2853113 KEGG:ban:BA_0050 KEGG:bar:GBAA_0050 KEGG:bat:BAS0050
OMA:KPETFMN BioCyc:BANT260799:GJAJ-57-MONOMER
BioCyc:BANT261594:GJ7F-59-MONOMER Uniprot:Q81VY9
Length = 186
Score = 221 (82.9 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 61/183 (33%), Positives = 94/183 (51%)
Query: 51 LIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQ 110
LIVGLGNPG +Y TRHN+GF ID +A+ I++N + K L G G + ++L KP
Sbjct: 3 LIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGLFGAGFVNGEKVILLKPL 62
Query: 111 AYMNFSGESI-----YDEMSLMNGVLRLQ----PKGG-----HGHHNGLKSVMNHLD--G 154
YMN SGESI Y ++ + + V+ P G G G V + + G
Sbjct: 63 TYMNLSGESIRPLMDYYKIDVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHLG 122
Query: 155 CREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNIS 214
+EF R+ +GI P M + Y+L +F+ E ++ ++E+ +A + F Q ++
Sbjct: 123 TQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQIMN 182
Query: 215 RFN 217
FN
Sbjct: 183 TFN 185
>TIGR_CMR|CPS_3559 [details] [associations]
symbol:CPS_3559 "peptidyl-tRNA hydrolase" species:167879
"Colwellia psychrerythraea 34H" [GO:0004045 "aminoacyl-tRNA
hydrolase activity" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195
PROSITE:PS01195 PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0004045
eggNOG:COG0193 KO:K01056 Gene3D:3.40.50.1470 PANTHER:PTHR17224
SUPFAM:SSF53178 TIGRFAMs:TIGR00447 HOGENOM:HOG000004796
ProtClustDB:PRK05426 OMA:IKFKTGG RefSeq:YP_270233.1
ProteinModelPortal:Q47Y87 SMR:Q47Y87 STRING:Q47Y87 GeneID:3518514
KEGG:cps:CPS_3559 PATRIC:21470049
BioCyc:CPSY167879:GI48-3587-MONOMER Uniprot:Q47Y87
Length = 194
Score = 134 (52.2 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 24/76 (31%), Positives = 49/76 (64%)
Query: 121 YDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPGKMDMKAYLLQ 180
+DE+ ++ GV +++ GGHG HNGL+ +++ + ++F RL IGI +P + + ++L
Sbjct: 93 HDELDMLPGVCKIKKGGGHGGHNGLRDIIDRMANNKDFYRLRIGIDHPGHRDKVTGHVLG 152
Query: 181 KFSPIEREQIDAALEQ 196
K E+ +I+ A+++
Sbjct: 153 KAPSAEQAKIEQAIDE 168
Score = 118 (46.6 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 26/71 (36%), Positives = 40/71 (56%)
Query: 51 LIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQS-KALIGIGSIGEVPILLAKP 109
LI GLGNPG +Y TRHN G ++ +A++ I++ + L G G I + L P
Sbjct: 5 LIAGLGNPGPEYSKTRHNAGVWFVEELARSHNISLRPEKKYSGLYGKGLIAGNLVHLLIP 64
Query: 110 QAYMNFSGESI 120
+MN SG+++
Sbjct: 65 TTFMNRSGQAV 75
>TIGR_CMR|CJE_0357 [details] [associations]
symbol:CJE_0357 "peptidyl-tRNA hydrolase" species:195099
"Campylobacter jejuni RM1221" [GO:0004045 "aminoacyl-tRNA hydrolase
activity" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195
PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0004045 eggNOG:COG0193
HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 TIGRFAMs:TIGR00447
ProtClustDB:PRK05426 RefSeq:YP_178376.1 ProteinModelPortal:Q5HWF9
STRING:Q5HWF9 GeneID:3231119 KEGG:cjr:CJE0357 PATRIC:20042418
OMA:FSSKHNA BioCyc:CJEJ195099:GJC0-362-MONOMER Uniprot:Q5HWF9
Length = 181
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 62/172 (36%), Positives = 91/172 (52%)
Query: 51 LIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQ 110
L+VGLGN G++Y TRHNVGF +ID + + N SK + IG +LL KP
Sbjct: 3 LVVGLGNIGVEYENTRHNVGFMLIDLLLKESNFT-NLTNSKFKGELFKIGS-SLLLLKPS 60
Query: 111 AYMNFSGES---------------IYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGC 155
YMN SG S I+D++ + G LR + G G HNGLKS+ + L G
Sbjct: 61 TYMNNSGLSVKAVNDFYKCERMIVIHDDIDINLGALRFKKGGSSGGHNGLKSI-DTLCG- 118
Query: 156 REFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLN 207
++ R+ IG+G G+ ++ +++L KF P E + LE +A+ L+ N
Sbjct: 119 NDYERVRIGVGK--GE-NVISHVLGKFKPEEEITLSKVLEHTKKALLELIEN 167
>UNIPROTKB|P65865 [details] [associations]
symbol:pth "Peptidyl-tRNA hydrolase" species:1773
"Mycobacterium tuberculosis" [GO:0004045 "aminoacyl-tRNA hydrolase
activity" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0040007 "growth" evidence=IMP] InterPro:IPR001328
InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195 PROSITE:PS01196
HAMAP:MF_00083 GO:GO:0005886 GO:GO:0005737 GO:GO:0040007
EMBL:BX842575 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0004045 eggNOG:COG0193 KO:K01056
Gene3D:3.40.50.1470 PANTHER:PTHR17224 SUPFAM:SSF53178
TIGRFAMs:TIGR00447 HOGENOM:HOG000004796 OMA:VINWVLK
ProtClustDB:PRK05426 PIR:A70622 RefSeq:NP_215530.1
RefSeq:NP_335479.1 RefSeq:YP_006514375.1 PDB:2JRC PDB:2Z2I PDB:2Z2J
PDB:2Z2K PDB:3TCK PDB:3TCN PDB:3TD2 PDB:3TD6 PDBsum:2JRC
PDBsum:2Z2I PDBsum:2Z2J PDBsum:2Z2K PDBsum:3TCK PDBsum:3TCN
PDBsum:3TD2 PDBsum:3TD6 ProteinModelPortal:P65865 SMR:P65865
PRIDE:P65865 EnsemblBacteria:EBMYCT00000001706
EnsemblBacteria:EBMYCT00000072150 GeneID:13319576 GeneID:886037
GeneID:925158 KEGG:mtc:MT1042 KEGG:mtu:Rv1014c KEGG:mtv:RVBD_1014c
PATRIC:18124034 TubercuList:Rv1014c EvolutionaryTrace:P65865
Uniprot:P65865
Length = 191
Score = 204 (76.9 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 50/139 (35%), Positives = 75/139 (53%)
Query: 89 QSKALIGIGSIGEVPILLAKPQAYMNFSGESI-----------------YDEMSLMNGVL 131
+S A + G ++LAKP+ YMN SG I +D++ L G +
Sbjct: 45 RSGAEVATGRSAGRSLVLAKPRCYMNESGRQIGPLAKFYSVAPANIIVIHDDLDLEFGRI 104
Query: 132 RLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQID 191
RL+ GG G HNGL+SV+ L G ++F R+ IGIG PPG+ D A++L+ F+P ER ++
Sbjct: 105 RLKIGGGEGGHNGLRSVVAAL-GTKDFQRVRIGIGRPPGRKDPAAFVLENFTPAERAEVP 163
Query: 192 AALEQGVEAVRTLVLNGFD 210
EQ +A L+ G +
Sbjct: 164 TICEQAADATELLIEQGME 182
Score = 133 (51.9 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 31/73 (42%), Positives = 40/73 (54%)
Query: 49 PWLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQ-SKALIGIGSIGEVPILLA 107
P L+VGLGNPG Y TRHN+GF + D +A + S A + G ++LA
Sbjct: 4 PLLVVGLGNPGANYARTRHNLGFVVADLLAARLGAKFKAHKRSGAEVATGRSAGRSLVLA 63
Query: 108 KPQAYMNFSGESI 120
KP+ YMN SG I
Sbjct: 64 KPRCYMNESGRQI 76
>TIGR_CMR|CBU_1841 [details] [associations]
symbol:CBU_1841 "peptidyl-tRNA hydrolase" species:227377
"Coxiella burnetii RSA 493" [GO:0004045 "aminoacyl-tRNA hydrolase
activity" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195
PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0004045 eggNOG:COG0193 KO:K01056
Gene3D:3.40.50.1470 PANTHER:PTHR17224 SUPFAM:SSF53178
TIGRFAMs:TIGR00447 HOGENOM:HOG000004796 ProtClustDB:PRK05426
OMA:FSSKHNA RefSeq:NP_820820.1 ProteinModelPortal:Q83AP0
PRIDE:Q83AP0 GeneID:1209753 KEGG:cbu:CBU_1841 PATRIC:17932413
BioCyc:CBUR227377:GJ7S-1815-MONOMER Uniprot:Q83AP0
Length = 187
Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 64/181 (35%), Positives = 90/181 (49%)
Query: 51 LIVGLGNPGIKYHGTRHNVGFEMIDHIAQA--QRIAM-NTIQS-----------KALIGI 96
LI GLGNPG +Y TRHNVG ++ +AQ Q +A N K +
Sbjct: 7 LIAGLGNPGDQYARTRHNVGAWFLETLAQQRNQSLAKENKFHGFVAKCNDYWLLKPTTFM 66
Query: 97 GSIGEVPILLAKPQAYMNFSGESI--YDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDG 154
G+ LA Y E + +DE+ G +RL+ GGHG HNGL++++ HL G
Sbjct: 67 NESGQAVAALA--HFYKIKPSEILIAHDELDFPAGDIRLKEGGGHGGHNGLRNIIQHL-G 123
Query: 155 CREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNIS 214
+F RL IGI +P K + Y+L S +R I AA+E+G+ + LV F Q +
Sbjct: 124 SSDFYRLRIGINHPGHKDRVTPYVLSPPSENDRIAILAAIEKGLRLIPELVQGDF-QKVM 182
Query: 215 R 215
R
Sbjct: 183 R 183
>TIGR_CMR|GSU_0663 [details] [associations]
symbol:GSU_0663 "peptidyl-tRNA hydrolase" species:243231
"Geobacter sulfurreducens PCA" [GO:0004045 "aminoacyl-tRNA
hydrolase activity" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195
PROSITE:PS01195 PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0004045
eggNOG:COG0193 KO:K01056 Gene3D:3.40.50.1470 PANTHER:PTHR17224
SUPFAM:SSF53178 TIGRFAMs:TIGR00447 HOGENOM:HOG000004796 OMA:VINWVLK
ProtClustDB:PRK05426 RefSeq:NP_951720.1 ProteinModelPortal:Q74FE6
GeneID:2685517 KEGG:gsu:GSU0663 PATRIC:22024085
BioCyc:GSUL243231:GH27-682-MONOMER Uniprot:Q74FE6
Length = 193
Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 58/184 (31%), Positives = 92/184 (50%)
Query: 51 LIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQ 110
LIVGLGNPG KY TRHN GF ++D +A A ++ + G G+ +LL KPQ
Sbjct: 5 LIVGLGNPGPKYLWTRHNAGFMVLDRLAHAIGASVTRKSFSGVFGEGAWHGERLLLLKPQ 64
Query: 111 AYMNFSGESI-----YDEMSLMNGVL----------RLQPKGGHGHHNGLKSVMNHLD-- 153
YMN SG S+ + ++ L + ++ R++ K G GH G + + +
Sbjct: 65 TYMNLSGRSVAEALRFHKLPLCDTIVIHDDLDIPFGRVKVKEGGGH-GGHNGLRSLVQEL 123
Query: 154 GCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNI 213
G F R+ +GIG P D+ Y+L FS E + L+ ++ + +L+ G + +
Sbjct: 124 GGAGFVRVRVGIGRPVHG-DVVNYVLTNFSQDEMADLAHLLDGTLDLLESLLTAGLPKTM 182
Query: 214 SRFN 217
S +N
Sbjct: 183 SLYN 186
>TIGR_CMR|SPO_0811 [details] [associations]
symbol:SPO_0811 "peptidyl-tRNA hydrolase" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0004045 "aminoacyl-tRNA hydrolase
activity" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195
PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0004045 eggNOG:COG0193 KO:K01056
Gene3D:3.40.50.1470 PANTHER:PTHR17224 SUPFAM:SSF53178
TIGRFAMs:TIGR00447 HOGENOM:HOG000004796 ProtClustDB:PRK05426
OMA:KPETFMN RefSeq:YP_166064.1 ProteinModelPortal:Q5LV91
GeneID:3195572 KEGG:sil:SPO0811 PATRIC:23374899 Uniprot:Q5LV91
Length = 239
Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 52/164 (31%), Positives = 83/164 (50%)
Query: 51 LIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQ 110
L VGLGNPG KY RHN+GF +D IA+ ++ + I G +G +LL KP+
Sbjct: 3 LFVGLGNPGAKYARNRHNIGFMALDRIAEDHGFGPWRVKFQGQIAEGRLGREKVLLLKPE 62
Query: 111 AYMNFSGESIYDEM----------SLMNGVLRLQP-----KGGHGHHNGLKSVMNHLDGC 155
+MN SG+S+ + M ++++ L L P K G GH G + + D
Sbjct: 63 TFMNRSGQSVGEAMRFYKLDSTDITVLHDELDLAPGKVKVKAGGGHA-GHNGLRSIHDHI 121
Query: 156 -REFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALEQGV 198
+ R+ +GIG+P K + Y+L F+ + + ++ L +GV
Sbjct: 122 GAAYDRVRLGIGHPGRKEAVAGYVLHDFARADEDWLEDVL-RGV 164
>TIGR_CMR|DET_0595 [details] [associations]
symbol:DET_0595 "peptidyl-tRNA hydrolase" species:243164
"Dehalococcoides ethenogenes 195" [GO:0004045 "aminoacyl-tRNA
hydrolase activity" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR001328 Pfam:PF01195 PROSITE:PS01195
PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0004045 eggNOG:COG0193
HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 TIGRFAMs:TIGR00447 OMA:VINWVLK
ProtClustDB:PRK05426 RefSeq:YP_181337.1 ProteinModelPortal:Q3Z8W2
STRING:Q3Z8W2 GeneID:3230075 KEGG:det:DET0595 PATRIC:21608261
BioCyc:DETH243164:GJNF-596-MONOMER Uniprot:Q3Z8W2
Length = 189
Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 48/137 (35%), Positives = 69/137 (50%)
Query: 51 LIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQ 110
LI+GLGNPG +Y G RHNVGF+ + A+ I+ + + G G I + I+LAKPQ
Sbjct: 3 LIIGLGNPGKEYSGNRHNVGFQCLSRFAKDNHISFDKKCCLSRTGSGRINDEEIVLAKPQ 62
Query: 111 AYMNFSGESIYDEMSLMN----GVLRLQ-----PKGG-----HGHHNGLKSVMNHLD--G 154
YMN SG++ + N ++ +Q P G G G + + + G
Sbjct: 63 TYMNLSGKAASQLLRRYNLKAADIIVVQDDLDLPAGKIRLRLGGSAGGHNGISSIITDIG 122
Query: 155 CREFPRLCIGIGNPPGK 171
+EF RL IGIG P +
Sbjct: 123 TKEFIRLKIGIGKPDSR 139
Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 36/101 (35%), Positives = 57/101 (56%)
Query: 120 IYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPGK---MDMKA 176
+ D++ L G +RL+ G G HNG+ S++ + G +EF RL IGIG P + ++
Sbjct: 89 VQDDLDLPAGKIRLRLGGSAGGHNGISSIITDI-GTKEFIRLKIGIGKPDSRNNGTEVVD 147
Query: 177 YLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNISRFN 217
++L F ERE +D A+ + EA+ L+ G D +RFN
Sbjct: 148 HVLGNFGGEEREIMDKAITRASEALTCLLTFGLDTASNRFN 188
>UNIPROTKB|E2RR88 [details] [associations]
symbol:PTRH1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0004045 "aminoacyl-tRNA hydrolase activity" evidence=IEA]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01196
GO:GO:0005739 GO:GO:0004045 Gene3D:3.40.50.1470 PANTHER:PTHR17224
SUPFAM:SSF53178 OMA:IKFKTGG GeneTree:ENSGT00390000004247
EMBL:AAEX03006864 Ensembl:ENSCAFT00000032028 Uniprot:E2RR88
Length = 215
Score = 113 (44.8 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 23/74 (31%), Positives = 43/74 (58%)
Query: 50 WLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSK---ALIGIGSIGEVPILL 106
WL+ GLGNPG+ TRH+VG ++ +A+ +A + + A + + S+ + ++L
Sbjct: 31 WLVAGLGNPGLP--STRHSVGLAVLGQLARRLGVADGWARDRRCAADLALASLDDAQLVL 88
Query: 107 AKPQAYMNFSGESI 120
+P+ MN +G S+
Sbjct: 89 LRPRRLMNANGRSV 102
Score = 108 (43.1 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 31/98 (31%), Positives = 49/98 (50%)
Query: 106 LAKPQAYMNFSGESIY---DEMSLMNGVLRLQPKGGHGH-HNGLKSVMNHLDGCREFPRL 161
+A+ + E +Y DE+ G L L+ G HNG++S ++ L+ PRL
Sbjct: 102 VARAAELFGLTAEEVYLVHDELDKPLGKLALKLGGSSRRGHNGVRSCISCLNSSA-MPRL 160
Query: 162 CIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALEQGVE 199
+GIG P +KAY+L FS E+E + LE+ +
Sbjct: 161 RVGIGRPTEPDTVKAYVLGCFSAAEQELLPPLLERATD 198
>DICTYBASE|DDB_G0280507 [details] [associations]
symbol:DDB_G0280507 "Peptidyl-tRNA hydrolase"
species:44689 "Dictyostelium discoideum" [GO:0004045
"aminoacyl-tRNA hydrolase activity" evidence=IEA]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195
dictyBase:DDB_G0280507 EMBL:AAFI02000036 GO:GO:0004045
eggNOG:COG0193 Gene3D:3.40.50.1470 PANTHER:PTHR17224
SUPFAM:SSF53178 RefSeq:XP_641213.1 ProteinModelPortal:Q54V95
STRING:Q54V95 EnsemblProtists:DDB0205243 GeneID:8622594
KEGG:ddi:DDB_G0280507 InParanoid:Q54V95 Uniprot:Q54V95
Length = 452
Score = 111 (44.1 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 50 WLIVGLGNPGIKYHGTRHNVGFEMIDHIAQ 79
++IVGLGNPG +Y TRHN+GF IDH+ +
Sbjct: 166 YIIVGLGNPGTEYVNTRHNIGFSAIDHLCE 195
Score = 100 (40.3 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 23/71 (32%), Positives = 42/71 (59%)
Query: 120 IYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPGKMDMKAYLL 179
+ D++S GV++++ KGG G++SV++ L G +F R+ G+G P ++L
Sbjct: 355 LVDDISTDIGVIKMRTKGGSAGQKGIESVISRL-GTEKFSRIKFGVGVPNAGEIRSNFVL 413
Query: 180 QKFSPIEREQI 190
+KFS E+E +
Sbjct: 414 KKFSR-EKEHL 423
>TIGR_CMR|NSE_0307 [details] [associations]
symbol:NSE_0307 "peptidyl-tRNA hydrolase" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0004045 "aminoacyl-tRNA
hydrolase activity" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195
PROSITE:PS01195 PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737
GO:GO:0004045 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG0193 HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 TIGRFAMs:TIGR00447
ProtClustDB:PRK05426 RefSeq:YP_506197.1 ProteinModelPortal:Q2GE99
STRING:Q2GE99 GeneID:3931915 KEGG:nse:NSE_0307 PATRIC:22680705
OMA:LADIPIM BioCyc:NSEN222891:GHFU-333-MONOMER Uniprot:Q2GE99
Length = 194
Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 45/164 (27%), Positives = 83/164 (50%)
Query: 46 EYTPWLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPIL 105
E+ +++ GLGNPG++Y TRHN+GF +ID++ + L+ G + +
Sbjct: 3 EFRTFVLCGLGNPGLRYAQTRHNLGFMLIDYVRYTFSFPEFLPKFSGLLSSGRVSSFLLY 62
Query: 106 LAKPQAYMNFSGESI-----YDEMSLMNGVL----------RLQPKGGHGHHNGLKSVMN 150
L KP A+MN SG + + ++ L N ++ +++ K G G +G + +
Sbjct: 63 LFKPVAFMNNSGRPLVQLVNFYKVELENVIVFHDDIDLDFAKVKIKRGGG--SGGHNGLK 120
Query: 151 HLD---GCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQID 191
LD G R++ R G+G G D ++L +F+ +E E+++
Sbjct: 121 SLDFNLG-RDYWRFRFGVGRGVG--DPAEHVLSRFTALELERLN 161
>SGD|S000001232 [details] [associations]
symbol:PTH1 "One of two mitochondrially-localized
peptidyl-tRNA hydrolases" species:4932 "Saccharomyces cerevisiae"
[GO:0004045 "aminoacyl-tRNA hydrolase activity"
evidence=IEA;IGI;IDA] [GO:0032543 "mitochondrial translation"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA;IDA] InterPro:IPR001328
InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195 PROSITE:PS01196
SGD:S000001232 GO:GO:0005739 EMBL:BK006934 GO:GO:0032543
EMBL:U00030 GO:GO:0004045 eggNOG:COG0193 HOGENOM:HOG000004797
KO:K01056 Gene3D:3.40.50.1470 PANTHER:PTHR17224 SUPFAM:SSF53178
TIGRFAMs:TIGR00447 KO:K11270 RefSeq:NP_012061.3 GeneID:856598
KEGG:sce:YHR191C RefSeq:NP_012059.3 GeneID:856596 KEGG:sce:YHR189W
GeneTree:ENSGT00390000004247 OrthoDB:EOG4GXJXH PIR:S46683
ProteinModelPortal:P38876 SMR:P38876 DIP:DIP-5239N MINT:MINT-556852
STRING:P38876 PRIDE:P38876 EnsemblFungi:YHR189W CYGD:YHR189w
OMA:KYTLLQS NextBio:982484 Genevestigator:P38876 GermOnline:YHR189W
Uniprot:P38876
Length = 190
Score = 92 (37.4 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 25/77 (32%), Positives = 37/77 (48%)
Query: 50 WLIV--GLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVP---- 103
W +V G+GNP +Y GTRHNVG M++ + + + T G G + +
Sbjct: 5 WRLVLTGIGNPEPQYAGTRHNVGLYMLELLRKRLGLQGRTYSPVPNTG-GKVHYIEDEHC 63
Query: 104 ILLAKPQAYMNFSGESI 120
+L YMN SGE +
Sbjct: 64 TILRSDGQYMNLSGEQV 80
Score = 89 (36.4 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 120 IYDEMSLMNGVLRLQ-PKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPG 170
I+DE+S+ G ++L+ P HNGL+S++ G F +L IGIG PG
Sbjct: 97 IHDELSVACGKVQLRAPSTSIRGHNGLRSLLKCSGGRVPFAKLAIGIGREPG 148
>CGD|CAL0004445 [details] [associations]
symbol:orf19.4740 species:5476 "Candida albicans" [GO:0004045
"aminoacyl-tRNA hydrolase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0032543 "mitochondrial
translation" evidence=IEA] InterPro:IPR001328 InterPro:IPR018171
Pfam:PF01195 PROSITE:PS01195 PROSITE:PS01196 CGD:CAL0004445
EMBL:AACQ01000001 EMBL:AACQ01000002 GO:GO:0004045 eggNOG:COG0193
KO:K01056 Gene3D:3.40.50.1470 PANTHER:PTHR17224 SUPFAM:SSF53178
RefSeq:XP_723236.1 RefSeq:XP_723427.1 ProteinModelPortal:Q5APM6
STRING:Q5APM6 GeneID:3634793 GeneID:3635043 KEGG:cal:CaO19.12202
KEGG:cal:CaO19.4740 Uniprot:Q5APM6
Length = 210
Score = 132 (51.5 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 48/176 (27%), Positives = 82/176 (46%)
Query: 52 IVGLGNPGIKYHGTRHNVGFEMI---------DHIAQAQRIAMNTIQSKALI--GIGSIG 100
I +GNP +Y TRHN G ++ DH+ + ++T S ++ S+
Sbjct: 26 IASIGNPEPQYANTRHNAGHRLMNQLIDVYWKDHVYKKGPYYLSTKYSNLVLFKSNDSLM 85
Query: 101 EVPILLAKPQAYMNFSGES----IYDEMSLMNGVLRLQPKGGHGH-HNGLKSVMNHLDGC 155
+ L + G+S ++DE+ + G +++ G HNGLKS+ +L
Sbjct: 86 NLQGLPISKHFGKHDQGKSALVVLHDELQVDLGKYQIRKPGTSSRGHNGLKSIDKYLKN- 144
Query: 156 REFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQID-AALEQGVEAVRTLVLNGFD 210
R F +L IGIG PP + Y+L+ FS E + ID L + V+ + +V+ +
Sbjct: 145 RYF-KLGIGIGRPPASQSVVHYVLKNFSSQELDVIDWEVLPKCVKDLENMVIKDLE 199
>UNIPROTKB|E1BK88 [details] [associations]
symbol:PTRH1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0004045
"aminoacyl-tRNA hydrolase activity" evidence=IEA]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01196
GO:GO:0005739 GO:GO:0004045 Gene3D:3.40.50.1470 PANTHER:PTHR17224
SUPFAM:SSF53178 OMA:IKFKTGG GeneTree:ENSGT00390000004247
EMBL:DAAA02032156 IPI:IPI00689946 Ensembl:ENSBTAT00000016930
Uniprot:E1BK88
Length = 216
Score = 132 (51.5 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 37/126 (29%), Positives = 65/126 (51%)
Query: 77 IAQAQRIAMNTIQSKALIG--IGSIGEVPIL-LAKPQAYMNFSGESIYDEMSLMNGVLRL 133
+ AQ + + + L G + G+V + L + Y+ ++DE+ G + L
Sbjct: 81 LGDAQLVLLRPRRLMNLNGHSVAQAGQVELFGLTAEEVYL------VHDELDKPLGKVAL 134
Query: 134 QPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAA 193
+ G HNG++S M+ L+ PRL +GIG P + ++AY+L +FSP E+E +
Sbjct: 135 KLGGSARGHNGVRSCMSCLNS-NAMPRLQVGIGRPTHRDAVQAYVLGRFSPAEQELLPPV 193
Query: 194 LEQGVE 199
LE+ V+
Sbjct: 194 LERAVD 199
Score = 123 (48.4 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 25/74 (33%), Positives = 45/74 (60%)
Query: 50 WLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSK---ALIGIGSIGEVPILL 106
WL+ GLGNPG+ GTRH+VG ++ +A+ +A + + + A + S+G+ ++L
Sbjct: 31 WLVAGLGNPGLP--GTRHSVGMAVLGQLARRLGVAESWERDRRCAADLAQASLGDAQLVL 88
Query: 107 AKPQAYMNFSGESI 120
+P+ MN +G S+
Sbjct: 89 LRPRRLMNLNGHSV 102
>RGD|1310165 [details] [associations]
symbol:Ptrh1 "peptidyl-tRNA hydrolase 1 homolog (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0004045 "aminoacyl-tRNA
hydrolase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001328 Pfam:PF01195 RGD:1310165
RGD:1359111 GO:GO:0004045 Gene3D:3.40.50.1470 PANTHER:PTHR17224
SUPFAM:SSF53178 IPI:IPI00780687 Ensembl:ENSRNOT00000060258
ArrayExpress:F1M8A9 Uniprot:F1M8A9
Length = 208
Score = 130 (50.8 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 27/74 (36%), Positives = 43/74 (58%)
Query: 50 WLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSK---ALIGIGSIGEVPILL 106
WL+ GLGNPG+ GTRH+VG ++ IAQ +A N + A + + G+ ++L
Sbjct: 34 WLVAGLGNPGMP--GTRHSVGMAVLGQIAQRLGVAENWARDSRCAADLALAPFGDAQLVL 91
Query: 107 AKPQAYMNFSGESI 120
+P+ MN +G S+
Sbjct: 92 LRPRRLMNVNGRSV 105
>UNIPROTKB|F1RS14 [details] [associations]
symbol:PTRH1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0004045 "aminoacyl-tRNA hydrolase activity"
evidence=IEA] InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195
PROSITE:PS01196 GO:GO:0004045 Gene3D:3.40.50.1470 PANTHER:PTHR17224
SUPFAM:SSF53178 GeneTree:ENSGT00390000004247 EMBL:CU407281
Ensembl:ENSSSCT00000006174 Uniprot:F1RS14
Length = 204
Score = 127 (49.8 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 43/161 (26%), Positives = 77/161 (47%)
Query: 56 GNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNF 115
G PG + H V ++ + A+ A + + A + + S+G+ ++L +P+ MN
Sbjct: 40 GLPGTR-HSVGMAVLGQLARRLGVAESWARDA-RCAADLALASLGDAQVVLLRPRRLMNN 97
Query: 116 SGESI-----------------YDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREF 158
+G S+ +DE+ G L L+ G HNG++S ++ L+
Sbjct: 98 NGRSVARAAELFGLTAEEVYLVHDELDKPLGKLALKLGGSARGHNGVRSCISCLNS-NAM 156
Query: 159 PRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALEQGVE 199
PRL +GIG P ++AY+L +FS E+E + LE+ +
Sbjct: 157 PRLRVGIGRPTHPDTVQAYVLGRFSLAEQELLPPLLERATD 197
Score = 125 (49.1 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 25/74 (33%), Positives = 45/74 (60%)
Query: 50 WLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSK---ALIGIGSIGEVPILL 106
WL+ GLGNPG+ GTRH+VG ++ +A+ +A + + A + + S+G+ ++L
Sbjct: 31 WLVAGLGNPGLP--GTRHSVGMAVLGQLARRLGVAESWARDARCAADLALASLGDAQVVL 88
Query: 107 AKPQAYMNFSGESI 120
+P+ MN +G S+
Sbjct: 89 LRPRRLMNNNGRSV 102
>UNIPROTKB|F1RS13 [details] [associations]
symbol:PTRH1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0004045
"aminoacyl-tRNA hydrolase activity" evidence=IEA]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01196
GO:GO:0005739 GO:GO:0004045 Gene3D:3.40.50.1470 PANTHER:PTHR17224
SUPFAM:SSF53178 OMA:FSSKHNA GeneTree:ENSGT00390000004247
EMBL:CU407281 Ensembl:ENSSSCT00000006175 Uniprot:F1RS13
Length = 213
Score = 127 (49.8 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 43/161 (26%), Positives = 77/161 (47%)
Query: 56 GNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNF 115
G PG + H V ++ + A+ A + + A + + S+G+ ++L +P+ MN
Sbjct: 40 GLPGTR-HSVGMAVLGQLARRLGVAESWARDA-RCAADLALASLGDAQVVLLRPRRLMNN 97
Query: 116 SGESI-----------------YDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREF 158
+G S+ +DE+ G L L+ G HNG++S ++ L+
Sbjct: 98 NGRSVARAAELFGLTAEEVYLVHDELDKPLGKLALKLGGSARGHNGVRSCISCLNS-NAM 156
Query: 159 PRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALEQGVE 199
PRL +GIG P ++AY+L +FS E+E + LE+ +
Sbjct: 157 PRLRVGIGRPTHPDTVQAYVLGRFSLAEQELLPPLLERATD 197
Score = 125 (49.1 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 25/74 (33%), Positives = 45/74 (60%)
Query: 50 WLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSK---ALIGIGSIGEVPILL 106
WL+ GLGNPG+ GTRH+VG ++ +A+ +A + + A + + S+G+ ++L
Sbjct: 31 WLVAGLGNPGLP--GTRHSVGMAVLGQLARRLGVAESWARDARCAADLALASLGDAQVVL 88
Query: 107 AKPQAYMNFSGESI 120
+P+ MN +G S+
Sbjct: 89 LRPRRLMNNNGRSV 102
>UNIPROTKB|C9J7Z1 [details] [associations]
symbol:PTRH1 "Probable peptidyl-tRNA hydrolase"
species:9606 "Homo sapiens" [GO:0004045 "aminoacyl-tRNA hydrolase
activity" evidence=IEA] InterPro:IPR001328 Pfam:PF01195
GO:GO:0004045 Gene3D:3.40.50.1470 PANTHER:PTHR17224 SUPFAM:SSF53178
HGNC:HGNC:27039 OrthoDB:EOG4X3H2J EMBL:AL162426 IPI:IPI00945330
ProteinModelPortal:C9J7Z1 SMR:C9J7Z1 STRING:C9J7Z1
Ensembl:ENST00000423807 UCSC:uc010mxm.3 ArrayExpress:C9J7Z1
Bgee:C9J7Z1 Uniprot:C9J7Z1
Length = 182
Score = 121 (47.7 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 23/74 (31%), Positives = 45/74 (60%)
Query: 50 WLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSK---ALIGIGSIGEVPILL 106
W++ GLGNPG+ GTRH+VG ++ +A+ +A + + + A + + +G+ ++L
Sbjct: 31 WMVAGLGNPGLP--GTRHSVGMAVLGQLARRLGVAESWTRDRHCAADLALAPLGDAQLVL 88
Query: 107 AKPQAYMNFSGESI 120
+P+ MN +G S+
Sbjct: 89 LRPRRLMNANGRSV 102
>MGI|MGI:1913779 [details] [associations]
symbol:Ptrh1 "peptidyl-tRNA hydrolase 1 homolog (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0004045
"aminoacyl-tRNA hydrolase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195
PROSITE:PS01196 MGI:MGI:1913779 GO:GO:0005739 GO:GO:0004045
eggNOG:COG0193 HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 OMA:FSSKHNA CTD:138428
HOVERGEN:HBG067636 OrthoDB:EOG4X3H2J EMBL:AK075833 EMBL:BC098218
IPI:IPI00225955 RefSeq:NP_848710.1 UniGene:Mm.268037
ProteinModelPortal:Q8BW00 SMR:Q8BW00 STRING:Q8BW00
PhosphoSite:Q8BW00 PaxDb:Q8BW00 PRIDE:Q8BW00
Ensembl:ENSMUST00000066352 GeneID:329384 KEGG:mmu:329384
GeneTree:ENSGT00390000004247 ChiTaRS:PTRH1 NextBio:398724
Bgee:Q8BW00 CleanEx:MM_PTRH1 Genevestigator:Q8BW00
GermOnline:ENSMUSG00000053746 Uniprot:Q8BW00
Length = 204
Score = 122 (48.0 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 27/74 (36%), Positives = 45/74 (60%)
Query: 50 WLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMN-TIQSK--ALIGIGSIGEVPILL 106
WL+ GLGN G+ GTRH+VG ++ IA+ +A N T S+ A + + +G+ ++L
Sbjct: 21 WLVAGLGNHGMP--GTRHSVGMAVLGQIARRLGVAENWTRDSRCAADLALAPLGDAQLVL 78
Query: 107 AKPQAYMNFSGESI 120
+P+ MN +G S+
Sbjct: 79 LRPRRLMNVNGRSV 92
Score = 114 (45.2 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 39/161 (24%), Positives = 75/161 (46%)
Query: 56 GNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNF 115
G PG + H V ++ + A+ ++ + A + + +G+ ++L +P+ MN
Sbjct: 30 GMPGTR-HSVGMAVLGQIARRLGVAENWTRDS-RCAADLALAPLGDAQLVLLRPRRLMNV 87
Query: 116 SGESI-----------------YDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREF 158
+G S+ +DE+ G L L+ G HNG++S ++ L+
Sbjct: 88 NGRSVARAAELFGLTAEEIYLVHDELDKPLGKLALKLGGSARGHNGVRSCISCLNS-NAM 146
Query: 159 PRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALEQGVE 199
PRL +GIG P ++ ++L FSP E+E + ++Q +
Sbjct: 147 PRLLVGIGRPTHPNMVENHVLGCFSPEEQELLSPLMDQATD 187
>UNIPROTKB|Q86Y79 [details] [associations]
symbol:PTRH1 "Probable peptidyl-tRNA hydrolase"
species:9606 "Homo sapiens" [GO:0004045 "aminoacyl-tRNA hydrolase
activity" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195
PROSITE:PS01196 GO:GO:0005739 GO:GO:0004045 eggNOG:COG0193
HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 OMA:KPETFMN EMBL:BC047012
IPI:IPI00048572 RefSeq:NP_001002913.1 UniGene:Hs.653265
ProteinModelPortal:Q86Y79 SMR:Q86Y79 IntAct:Q86Y79 STRING:Q86Y79
PhosphoSite:Q86Y79 DMDM:74750555 PaxDb:Q86Y79 PRIDE:Q86Y79
DNASU:138428 Ensembl:ENST00000419060 Ensembl:ENST00000543175
GeneID:138428 KEGG:hsa:138428 UCSC:uc004bro.3 CTD:138428
GeneCards:GC09M130475 HGNC:HGNC:27039 HPA:HPA021223
neXtProt:NX_Q86Y79 PharmGKB:PA134917129 HOVERGEN:HBG067636
InParanoid:Q86Y79 OrthoDB:EOG4X3H2J PhylomeDB:Q86Y79
GenomeRNAi:138428 NextBio:83788 ArrayExpress:Q86Y79 Bgee:Q86Y79
CleanEx:HS_PTRH1 Genevestigator:Q86Y79 GermOnline:ENSG00000187024
Uniprot:Q86Y79
Length = 214
Score = 121 (47.7 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 23/74 (31%), Positives = 45/74 (60%)
Query: 50 WLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSK---ALIGIGSIGEVPILL 106
W++ GLGNPG+ GTRH+VG ++ +A+ +A + + + A + + +G+ ++L
Sbjct: 31 WMVAGLGNPGLP--GTRHSVGMAVLGQLARRLGVAESWTRDRHCAADLALAPLGDAQLVL 88
Query: 107 AKPQAYMNFSGESI 120
+P+ MN +G S+
Sbjct: 89 LRPRRLMNANGRSV 102
Score = 116 (45.9 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 33/125 (26%), Positives = 62/125 (49%)
Query: 94 IGIGSIGEVPILLAKPQAYMNFSGESI-----------------YDEMSLMNGVLRLQPK 136
+ + +G+ ++L +P+ MN +G S+ +DE+ G L L+
Sbjct: 76 LALAPLGDAQLVLLRPRRLMNANGRSVARAAELFGLTAEEVYLVHDELDKPLGRLALKLG 135
Query: 137 GGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALEQ 196
G HNG++S ++ L+ PRL +GIG P ++A++L FSP E+E + L++
Sbjct: 136 GSARGHNGVRSCISCLNS-NAMPRLRVGIGRPAHPEAVQAHVLGCFSPAEQELLPLLLDR 194
Query: 197 GVEAV 201
+ +
Sbjct: 195 ATDLI 199
>POMBASE|SPBC2D10.15c [details] [associations]
symbol:pth1 "mitochondrial peptidyl-tRNA hydrolase Pth1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004045
"aminoacyl-tRNA hydrolase activity" evidence=ISO] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0006412 "translation"
evidence=ISO] [GO:0032543 "mitochondrial translation" evidence=NAS]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195
PROSITE:PS01196 PomBase:SPBC2D10.15c GO:GO:0005739 EMBL:CU329671
GO:GO:0032543 GO:GO:0004045 eggNOG:COG0193 KO:K01056
Gene3D:3.40.50.1470 PANTHER:PTHR17224 SUPFAM:SSF53178 PIR:T40118
RefSeq:NP_596234.2 STRING:O74806 EnsemblFungi:SPBC2D10.15c.1
GeneID:2540340 KEGG:spo:SPBC2D10.15c OMA:SHCETES OrthoDB:EOG4GXJXH
NextBio:20801468 Uniprot:O74806
Length = 206
Score = 118 (46.6 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 44/156 (28%), Positives = 73/156 (46%)
Query: 51 LIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMN---TIQSKALI----GIGSIGEV- 102
+I GLGNPG + +RH++G M+ A + N T ++ L+ + G+
Sbjct: 32 IIYGLGNPGSAFVKSRHSLGKLMVSMYADSMAFPKNWPSTKENLTLVLSTSYMNDSGKQL 91
Query: 103 -PI---LLAKPQAYMNFSGESIYDEMSLMNGVLRLQ-PKGGHGHHNGLKSVMNHLDGCRE 157
I + K ++DE+ L G ++L+ P G H HNG++S L G
Sbjct: 92 KKISNDFVRKVSPLDKIVYVVVHDELELDLGKVKLRLPGGSHRGHNGIRSCQEFL-GKES 150
Query: 158 FPRLCIGIGN--PPGKMDMKAYLLQKFSPIEREQID 191
F R+ +GIG + D+ Y+L KF+ E + I+
Sbjct: 151 FYRIGLGIGRCESRNREDVSDYVLSKFNSNEMKLIE 186
>ZFIN|ZDB-GENE-050306-33 [details] [associations]
symbol:ptrh1 "peptidyl-tRNA hydrolase 1 homolog (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0004045 "aminoacyl-tRNA
hydrolase activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01196
ZFIN:ZDB-GENE-050306-33 GO:GO:0004045 eggNOG:COG0193
HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 HOVERGEN:HBG067636
OrthoDB:EOG4X3H2J GeneTree:ENSGT00390000004247 EMBL:BX001023
IPI:IPI00481323 RefSeq:NP_001119866.1 UniGene:Dr.88889
Ensembl:ENSDART00000142927 KEGG:dre:559192 InParanoid:A2BDR2
OMA:GKGLIGD NextBio:20882835 Uniprot:A2BDR2
Length = 266
Score = 113 (44.8 bits), Expect = 0.00019, P = 0.00019
Identities = 32/128 (25%), Positives = 62/128 (48%)
Query: 77 IAQAQRIAMNTIQSKALIGIGSIGEVPIL---LAKPQAYMNFSGESIYDEMSLMNGVLRL 133
+ Q Q + + ++ K L+ + + L +P+ + I+DE+ G +
Sbjct: 104 VTQLQDVQLVLLRPKLLMNVNGVSVAKAASRYLIQPEHIL-----LIHDELDKPLGKFGI 158
Query: 134 QPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAA 193
+ G HNG++S ++ L PRL IGIG P K + Y+L +FS E+ +D+
Sbjct: 159 KHGGSARGHNGVRSCVDCLQ-TDVMPRLRIGIGRPSDKTPIDRYVLGRFSKEEQNVLDSV 217
Query: 194 LEQGVEAV 201
++Q ++ +
Sbjct: 218 IKQSLDVL 225
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.139 0.428 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 227 227 0.00079 113 3 11 22 0.38 33
32 0.41 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 32
No. of states in DFA: 600 (64 KB)
Total size of DFA: 181 KB (2104 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 18.66u 0.10s 18.76t Elapsed: 00:00:01
Total cpu time: 18.66u 0.10s 18.76t Elapsed: 00:00:01
Start: Fri May 10 03:33:21 2013 End: Fri May 10 03:33:22 2013