Query 027181
Match_columns 227
No_of_seqs 155 out of 454
Neff 6.0
Searched_HMMs 46136
Date Fri Mar 29 06:10:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027181.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/027181hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF05653 Mg_trans_NIPA: Magnes 99.9 2.1E-23 4.5E-28 188.5 10.2 212 2-223 6-227 (300)
2 KOG2922 Uncharacterized conser 99.4 3.5E-14 7.6E-19 128.5 -1.1 120 4-123 22-143 (335)
3 PRK02971 4-amino-4-deoxy-L-ara 99.1 2.9E-09 6.3E-14 85.6 14.6 114 3-116 2-121 (129)
4 PRK15051 4-amino-4-deoxy-L-ara 98.9 4.9E-08 1.1E-12 76.4 13.2 104 5-116 3-108 (111)
5 PF13536 EmrE: Multidrug resis 98.7 1.4E-07 3E-12 73.2 10.7 67 51-118 41-107 (113)
6 PF10639 UPF0546: Uncharacteri 98.7 7.1E-08 1.5E-12 76.0 8.6 103 12-114 5-111 (113)
7 PF04142 Nuc_sug_transp: Nucle 98.7 2.8E-06 6.2E-11 74.9 19.4 168 48-220 20-197 (244)
8 COG2510 Predicted membrane pro 98.5 5.1E-07 1.1E-11 72.7 8.5 115 1-115 1-137 (140)
9 TIGR03340 phn_DUF6 phosphonate 98.4 1E-05 2.2E-10 71.7 15.2 113 4-116 2-134 (281)
10 PRK10452 multidrug efflux syst 98.3 2.1E-05 4.6E-10 62.6 13.2 97 6-116 5-102 (120)
11 KOG3912 Predicted integral mem 98.2 2.6E-06 5.7E-11 76.9 7.0 103 13-117 52-158 (372)
12 PF06027 DUF914: Eukaryotic pr 98.1 7.9E-05 1.7E-09 68.8 14.5 64 53-116 87-150 (334)
13 PRK09541 emrE multidrug efflux 98.0 0.00018 3.9E-09 56.4 12.8 96 6-116 5-102 (110)
14 PRK10532 threonine and homoser 98.0 0.00027 5.8E-09 63.1 15.0 114 3-116 148-280 (293)
15 PF00893 Multi_Drug_Res: Small 98.0 9.4E-05 2E-09 55.9 9.8 85 9-108 7-93 (93)
16 TIGR00950 2A78 Carboxylate/Ami 98.0 0.00023 4.9E-09 61.4 13.3 111 2-112 127-259 (260)
17 PRK11689 aromatic amino acid e 97.8 0.00048 1E-08 61.6 13.8 112 3-115 156-285 (295)
18 PF00892 EamA: EamA-like trans 97.8 6.8E-05 1.5E-09 56.7 6.8 66 50-115 59-124 (126)
19 PRK10650 multidrug efflux syst 97.8 0.00072 1.6E-08 53.0 12.6 97 4-115 8-106 (109)
20 PRK15430 putative chlorampheni 97.8 0.00051 1.1E-08 61.4 13.4 114 2-116 7-144 (296)
21 TIGR03340 phn_DUF6 phosphonate 97.8 0.00015 3.3E-09 64.2 9.7 112 4-115 145-281 (281)
22 TIGR00950 2A78 Carboxylate/Ami 97.8 0.0005 1.1E-08 59.3 12.6 68 50-117 52-119 (260)
23 PRK11272 putative DMT superfam 97.8 0.00079 1.7E-08 60.0 14.2 114 3-116 150-284 (292)
24 TIGR00776 RhaT RhaT L-rhamnose 97.8 0.0023 4.9E-08 57.5 16.9 113 4-117 2-136 (290)
25 PRK11431 multidrug efflux syst 97.7 0.00081 1.8E-08 52.3 11.8 68 48-115 32-100 (105)
26 COG2076 EmrE Membrane transpor 97.7 0.0011 2.3E-08 51.9 11.9 68 48-115 33-101 (106)
27 PRK11453 O-acetylserine/cystei 97.7 0.0026 5.7E-08 56.9 15.9 112 5-116 6-131 (299)
28 PRK11453 O-acetylserine/cystei 97.7 0.0017 3.6E-08 58.1 14.5 114 2-115 142-285 (299)
29 TIGR00817 tpt Tpt phosphate/ph 97.6 0.0032 6.9E-08 56.2 14.9 66 50-116 71-136 (302)
30 PLN00411 nodulin MtN21 family 97.6 0.0017 3.7E-08 60.4 13.5 114 3-116 189-327 (358)
31 TIGR00688 rarD rarD protein. T 97.4 0.0036 7.9E-08 54.4 13.2 112 4-116 3-141 (256)
32 PF08449 UAA: UAA transporter 97.4 0.002 4.3E-08 57.9 11.2 69 48-116 67-135 (303)
33 COG0697 RhaT Permeases of the 97.3 0.0042 9.1E-08 53.4 12.3 69 50-118 75-144 (292)
34 COG0697 RhaT Permeases of the 97.2 0.0091 2E-07 51.3 13.2 114 2-116 153-286 (292)
35 PRK15430 putative chlorampheni 97.2 0.013 2.9E-07 52.3 13.9 109 7-115 153-283 (296)
36 PTZ00343 triose or hexose phos 97.1 0.007 1.5E-07 55.8 11.8 59 58-116 127-185 (350)
37 KOG2234 Predicted UDP-galactos 97.1 0.22 4.8E-06 46.3 21.3 166 48-220 95-266 (345)
38 PRK11689 aromatic amino acid e 97.1 0.021 4.6E-07 51.0 14.2 113 4-116 5-136 (295)
39 PRK11272 putative DMT superfam 96.9 0.021 4.5E-07 50.9 12.6 66 50-116 74-140 (292)
40 TIGR00776 RhaT RhaT L-rhamnose 96.6 0.042 9.1E-07 49.3 12.2 112 2-116 151-287 (290)
41 COG5006 rhtA Threonine/homoser 96.6 0.055 1.2E-06 48.6 12.5 113 3-115 148-280 (292)
42 PLN00411 nodulin MtN21 family 96.1 1.2 2.7E-05 41.4 19.7 59 58-116 91-155 (358)
43 TIGR00817 tpt Tpt phosphate/ph 96.0 0.12 2.6E-06 46.0 11.6 115 2-116 144-292 (302)
44 PF06800 Sugar_transport: Suga 95.6 1.3 2.8E-05 40.0 16.6 168 48-225 45-246 (269)
45 KOG4831 Unnamed protein [Funct 95.0 0.074 1.6E-06 41.9 5.8 77 37-114 44-122 (125)
46 PF06027 DUF914: Eukaryotic pr 94.2 0.82 1.8E-05 42.4 11.8 115 2-116 167-304 (334)
47 PRK13499 rhamnose-proton sympo 94.2 3.3 7.1E-05 38.7 15.7 114 2-116 6-152 (345)
48 TIGR00803 nst UDP-galactose tr 94.1 0.42 9E-06 40.7 9.1 112 2-113 84-220 (222)
49 PRK10532 threonine and homoser 93.9 4.4 9.6E-05 36.0 18.4 108 2-116 11-136 (293)
50 PTZ00343 triose or hexose phos 93.1 2.5 5.4E-05 38.9 13.1 114 2-115 193-346 (350)
51 KOG2765 Predicted membrane pro 92.9 0.48 1E-05 44.8 7.9 60 59-118 173-232 (416)
52 PF03151 TPT: Triose-phosphate 92.4 4.4 9.5E-05 31.8 13.0 55 60-114 96-150 (153)
53 COG2962 RarD Predicted permeas 91.3 1.6 3.5E-05 39.8 9.2 80 37-116 60-143 (293)
54 PF08449 UAA: UAA transporter 88.8 15 0.00033 32.7 13.5 113 3-115 154-295 (303)
55 KOG4510 Permease of the drug/m 85.3 0.86 1.9E-05 41.6 3.3 112 4-116 39-168 (346)
56 PF06800 Sugar_transport: Suga 80.5 5.1 0.00011 36.2 6.3 62 52-113 202-267 (269)
57 KOG2765 Predicted membrane pro 77.5 31 0.00067 32.9 10.7 116 1-116 245-389 (416)
58 PF04657 DUF606: Protein of un 75.2 18 0.00038 29.2 7.5 65 50-114 69-138 (138)
59 KOG1442 GDP-fucose transporter 74.7 2.4 5.3E-05 38.8 2.6 64 54-118 111-174 (347)
60 COG3169 Uncharacterized protei 74.5 7.6 0.00016 30.3 4.8 61 54-114 47-112 (116)
61 KOG1441 Glucose-6-phosphate/ph 73.9 0.55 1.2E-05 43.3 -1.8 50 54-103 92-141 (316)
62 PRK02237 hypothetical protein; 72.1 30 0.00065 27.2 7.7 38 78-115 66-103 (109)
63 KOG4314 Predicted carbohydrate 64.9 9 0.0002 33.7 3.8 57 60-116 68-124 (290)
64 PF02694 UPF0060: Uncharacteri 63.7 13 0.00029 29.1 4.2 39 78-116 64-102 (107)
65 PF04342 DUF486: Protein of un 60.8 11 0.00023 29.6 3.2 60 54-113 40-104 (108)
66 PF04142 Nuc_sug_transp: Nucle 58.3 1.3E+02 0.0028 26.4 11.2 29 2-30 113-141 (244)
67 COG1742 Uncharacterized conser 54.7 16 0.00034 28.7 3.2 40 77-116 64-103 (109)
68 KOG1580 UDP-galactose transpor 54.3 18 0.00039 32.7 3.9 34 81-114 277-310 (337)
69 KOG2766 Predicted membrane pro 49.3 3.7 8E-05 37.4 -1.1 62 55-116 88-149 (336)
70 KOG1583 UDP-N-acetylglucosamin 44.1 94 0.002 28.7 7.0 69 48-116 67-136 (330)
71 PF05653 Mg_trans_NIPA: Magnes 41.0 97 0.0021 28.1 6.7 75 44-118 208-293 (300)
72 COG3238 Uncharacterized protei 38.2 1.4E+02 0.003 24.8 6.5 39 77-115 102-144 (150)
73 KOG1581 UDP-galactose transpor 37.5 3.1E+02 0.0068 25.6 9.3 63 53-116 91-154 (327)
74 TIGR00688 rarD rarD protein. T 35.2 2.8E+02 0.0062 23.6 10.7 85 7-92 150-255 (256)
75 COG2962 RarD Predicted permeas 34.6 2.5E+02 0.0055 25.8 8.2 59 57-115 223-281 (293)
76 PRK15403 multidrug efflux syst 30.3 4.3E+02 0.0093 24.2 10.1 40 37-76 209-248 (413)
77 KOG1583 UDP-N-acetylglucosamin 24.7 53 0.0011 30.3 2.1 34 83-116 280-313 (330)
78 KOG1443 Predicted integral mem 24.3 24 0.00053 32.8 -0.1 69 48-116 86-155 (349)
79 COG3114 CcmD Heme exporter pro 22.7 1.3E+02 0.0028 21.6 3.3 28 1-28 19-46 (67)
80 COG4975 GlcU Putative glucose 21.8 36 0.00079 30.9 0.5 69 48-116 59-135 (288)
No 1
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=99.89 E-value=2.1e-23 Score=188.55 Aligned_cols=212 Identities=20% Similarity=0.272 Sum_probs=148.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhccCCCCchhH-HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHhhhhH
Q 027181 2 WELICLTLAATAGNNIGKVLQKKGTVILPPLSFKL-KVIRAYAVNKAWVIGFLMDIFGALLMLRALSQAPVSVIQPVSGC 80 (227)
Q Consensus 2 ~~av~lAl~aA~~~a~g~vlQ~~aa~~~~~~~~~~-~~~~~llr~~~W~~G~~~~~~G~~l~~~AL~~~plsvVQpl~~~ 80 (227)
++|+.+|++++++++.|..+||++..+.++.+.+. +....++|||.||.|+.++.+|..++++|+.++|.++|||+++.
T Consensus 6 ~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~~~~~~~~l~~~~W~~G~~~~~~g~~~~~~Al~~ap~slv~Plg~~ 85 (300)
T PF05653_consen 6 YIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRAGSGGRSYLRRPLWWIGLLLMVLGEILNFVALGFAPASLVAPLGAL 85 (300)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccchhhHHHhhHHHHHHHHHHhcchHHHHHHHHhhhHHHHHHHHhh
Confidence 57999999999999999999999999877644322 34568999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhc-cCCCCCCCCccch-h----hhHHHHHHHHHHHHHHHHHHHHhh
Q 027181 81 GLAILSIFSHFYLKEVMNAVDWMGITLAGIGTIGVG-AGGEEQEPSSISI-F----QLPWLAFVVSILFVLLNGWLRICK 154 (227)
Q Consensus 81 ~l~~t~~ls~~~l~~rl~~~ew~gv~l~~~Gv~~l~-~~~~~~~~~~~~~-~----~~~~~~~~~~~~~v~~~~~~~~~~ 154 (227)
+++++++++++++|||++++||.|+.+++.|.+++. .++++++..+.+. . ++....-........+.......+
T Consensus 86 ~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~~~~~~t~~~l~~~~~~~~fl~y~~~~~~~~~~L~~~~~~ 165 (300)
T PF05653_consen 86 SLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPKEEPIHTLDELIALLSQPGFLVYFILVLVLILILIFFIKP 165 (300)
T ss_pred hhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCCCCCcCCHHHHHHHhcCcceehhHHHHHHHHHHHHHhhcc
Confidence 999999999999999999999999999999998776 3333332221111 1 111111111111111111111111
Q ss_pred hcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc---CCccccchHHHHHHHHHhhhhhheeee
Q 027181 155 HQRREQEMIEFEVVEEIIYGLESGILFGMASVISKLGFVFLE---QGFPTMLVPVCISISICCSGTGFYYQV 223 (227)
Q Consensus 155 ~~~~~~~~~~~~~~~a~~lg~aaG~~fG~~Avl~K~~~~~~~---~g~~~l~~~~~~~~~v~~~~~g~~~qt 223 (227)
|.++ ..-..+...+++..+++-..+|....... .|.. .+..|..|.++.+.+.-...|.
T Consensus 166 r~g~---------~~i~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~~g~~-~f~~~~~y~l~~~~v~~~~~Q~ 227 (300)
T PF05653_consen 166 RYGR---------RNILVYISICSLIGSFTVLSAKAISILIKLTFSGDN-QFTYPLTYLLLLVLVVTAVLQL 227 (300)
T ss_pred hhcc---------cceEEEEEEeccccchhhhHHHHHHHHHHHHhcCch-hhhhhHHHHHHHHHHHHHHHHH
Confidence 1111 12356788888888999999998553332 3443 3566677776655555444553
No 2
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.38 E-value=3.5e-14 Score=128.51 Aligned_cols=120 Identities=24% Similarity=0.359 Sum_probs=102.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCCCCchh-HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHhhhhHHH
Q 027181 4 LICLTLAATAGNNIGKVLQKKGTVILPPLSFK-LKVIRAYAVNKAWVIGFLMDIFGALLMLRALSQAPVSVIQPVSGCGL 82 (227)
Q Consensus 4 av~lAl~aA~~~a~g~vlQ~~aa~~~~~~~~~-~~~~~~llr~~~W~~G~~~~~~G~~l~~~AL~~~plsvVQpl~~~~l 82 (227)
+.++|+.+++.++....+||++..+....+.+ .+.-..|++.|.||+|+..+++|-.+++.|+.++|.++|.|+++.++
T Consensus 22 G~~LaissS~~Ig~sfilkKkgl~r~~~~~~ra~~gg~~yl~~~~Ww~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsv 101 (335)
T KOG2922|consen 22 GLVLAISSSIFIGSSFILKKKGLKRAGASGLRAGEGGYGYLKEPLWWAGMLTMIVGEIANFAAYAFAPASLVTPLGALSV 101 (335)
T ss_pred eeeehhhccEEEeeehhhhHHHHHHHhhhcccccCCCcchhhhHHHHHHHHHHHHHhHhhHHHHhhchHhhhccchhHHH
Confidence 56789999999999999999998775542210 11123677899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccccchhHHHHHHHHHHHHHHhc-cCCCCCC
Q 027181 83 AILSIFSHFYLKEVMNAVDWMGITLAGIGTIGVG-AGGEEQE 123 (227)
Q Consensus 83 ~~t~~ls~~~l~~rl~~~ew~gv~l~~~Gv~~l~-~~~~~~~ 123 (227)
+++++++++++||+++..+..|+.++++|..++. -+|++++
T Consensus 102 i~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~ 143 (335)
T KOG2922|consen 102 IISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQE 143 (335)
T ss_pred HHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcccc
Confidence 9999999999999999999999999999998876 3444443
No 3
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=99.12 E-value=2.9e-09 Score=85.61 Aligned_cols=114 Identities=18% Similarity=0.169 Sum_probs=96.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCCCCchhHH--HHHHHhhhh--hHHHHHHHHHHHHHHHHHHHhhcchhHHHhhh
Q 027181 3 ELICLTLAATAGNNIGKVLQKKGTVILPPLSFKLK--VIRAYAVNK--AWVIGFLMDIFGALLMLRALSQAPVSVIQPVS 78 (227)
Q Consensus 3 ~av~lAl~aA~~~a~g~vlQ~~aa~~~~~~~~~~~--~~~~llr~~--~W~~G~~~~~~G~~l~~~AL~~~plsvVQpl~ 78 (227)
.+.++.+.+.++++.|+.+-|+++++.++.+.+.. .......+| .-+.|+.++++++.++..+++..|+++..|+.
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~~~~~~~~~~~~~~~~~p~~~i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~ 81 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSRLPLLSHAWDFIAALLAFGLALRAVLLGLAGYALSMLCWLKALRYLPLSRAYPLL 81 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhCCCccchhHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHH
Confidence 36778889999999999999999988775443222 122345667 45699999999999999999999999999999
Q ss_pred hHHHHHHHHHHHH--HhccccchhHHHHHHHHHHHHHHhc
Q 027181 79 GCGLAILSIFSHF--YLKEVMNAVDWMGITLAGIGTIGVG 116 (227)
Q Consensus 79 ~~~l~~t~~ls~~--~l~~rl~~~ew~gv~l~~~Gv~~l~ 116 (227)
.....+....+.. ++||++|.++|.|+.++++|+.++.
T Consensus 82 sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~ 121 (129)
T PRK02971 82 SLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLIN 121 (129)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 9888888888875 8999999999999999999999885
No 4
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.90 E-value=4.9e-08 Score=76.36 Aligned_cols=104 Identities=16% Similarity=0.184 Sum_probs=84.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccCCCCchhHHHHHHHhhhhhHHHH--HHHHHHHHHHHHHHHhhcchhHHHhhhhHHH
Q 027181 5 ICLTLAATAGNNIGKVLQKKGTVILPPLSFKLKVIRAYAVNKAWVIG--FLMDIFGALLMLRALSQAPVSVIQPVSGCGL 82 (227)
Q Consensus 5 v~lAl~aA~~~a~g~vlQ~~aa~~~~~~~~~~~~~~~llr~~~W~~G--~~~~~~G~~l~~~AL~~~plsvVQpl~~~~l 82 (227)
.++-+.|.++...|+...|.+.+..|....+. ++..+.+ +.++..++.+...++...|+++.+|+...+.
T Consensus 3 ~~~l~~ai~~ev~g~~~lK~s~~~~~~~~~~~--------~~l~~~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~ 74 (111)
T PRK15051 3 WLTLVFASLLSVAGQLCQKQATRPVAIGKRRK--------HIVLWLGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNF 74 (111)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCcchhhh--------HHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHH
Confidence 34556778888899999999876544211110 1122333 3678999999999999999999999999999
Q ss_pred HHHHHHHHHHhccccchhHHHHHHHHHHHHHHhc
Q 027181 83 AILSIFSHFYLKEVMNAVDWMGITLAGIGTIGVG 116 (227)
Q Consensus 83 ~~t~~ls~~~l~~rl~~~ew~gv~l~~~Gv~~l~ 116 (227)
+++.+++.+++|||++.++|.|+.+++.|+++++
T Consensus 75 v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 75 VWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999998875
No 5
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.74 E-value=1.4e-07 Score=73.18 Aligned_cols=67 Identities=27% Similarity=0.399 Sum_probs=60.7
Q ss_pred HHHHHHHHHHHHHHHHhhcchhHHHhhhhHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccC
Q 027181 51 GFLMDIFGALLMLRALSQAPVSVIQPVSGCGLAILSIFSHFYLKEVMNAVDWMGITLAGIGTIGVGAG 118 (227)
Q Consensus 51 G~~~~~~G~~l~~~AL~~~plsvVQpl~~~~l~~t~~ls~~~l~~rl~~~ew~gv~l~~~Gv~~l~~~ 118 (227)
|......++.+++.|+.+.| ..+.++...+.+|+.+++..++|||+++++|.++.++.+|++++...
T Consensus 41 g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~ 107 (113)
T PF13536_consen 41 GLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWS 107 (113)
T ss_pred HHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhh
Confidence 44445588999999999999 69999999999999999999999999999999999999999998643
No 6
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=98.72 E-value=7.1e-08 Score=76.05 Aligned_cols=103 Identities=20% Similarity=0.329 Sum_probs=86.8
Q ss_pred HHHHHHHHHHHHhhhccCCCCchh---HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHhhh-hHHHHHHHH
Q 027181 12 TAGNNIGKVLQKKGTVILPPLSFK---LKVIRAYAVNKAWVIGFLMDIFGALLMLRALSQAPVSVIQPVS-GCGLAILSI 87 (227)
Q Consensus 12 A~~~a~g~vlQ~~aa~~~~~~~~~---~~~~~~llr~~~W~~G~~~~~~G~~l~~~AL~~~plsvVQpl~-~~~l~~t~~ 87 (227)
+++-+..+-+-||+++..++...+ ......++++|+++.+++++..|++..+..|...|+|+..|+- +.+.+||++
T Consensus 5 g~~WG~Tnpfik~g~~~~~~~~~~~~~~~~~~~Ll~n~~y~ipf~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l 84 (113)
T PF10639_consen 5 GILWGCTNPFIKRGSSGLEKVKASLQLLQEIKFLLLNPKYIIPFLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTAL 84 (113)
T ss_pred hHHhcCchHHHHHHHhhcCCccchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHH
Confidence 345566778888888765443222 3456679999999999999999999999999999999999997 999999999
Q ss_pred HHHHHhccccchhHHHHHHHHHHHHHH
Q 027181 88 FSHFYLKEVMNAVDWMGITLAGIGTIG 114 (227)
Q Consensus 88 ls~~~l~~rl~~~ew~gv~l~~~Gv~~ 114 (227)
.+.++.+|..+++.|.|..+++.|+.+
T Consensus 85 ~g~~lge~~~~~~~~~G~~Li~~Gv~L 111 (113)
T PF10639_consen 85 TGWLLGEEVISRRTWLGMALILAGVAL 111 (113)
T ss_pred HHHHhcCcccchhHHHHHHHHHcCeee
Confidence 997777777888899999999999864
No 7
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=98.71 E-value=2.8e-06 Score=74.92 Aligned_cols=168 Identities=20% Similarity=0.193 Sum_probs=105.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcchhHHHhhhhHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccC--CC--CCC
Q 027181 48 WVIGFLMDIFGALLMLRALSQAPVSVIQPVSGCGLAILSIFSHFYLKEVMNAVDWMGITLAGIGTIGVGAG--GE--EQE 123 (227)
Q Consensus 48 W~~G~~~~~~G~~l~~~AL~~~plsvVQpl~~~~l~~t~~ls~~~l~~rl~~~ew~gv~l~~~Gv~~l~~~--~~--~~~ 123 (227)
+..+..+|.+.-.+++.++...|.+..|.+....+++|++++.+++|||+++++|.++.+.+.|+.++... .+ +++
T Consensus 20 ~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~~~~~~ 99 (244)
T PF04142_consen 20 LAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQSSDNSS 99 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcccccccc
Confidence 56888899999999999999999999999999999999999999999999999999999999999988621 11 111
Q ss_pred CCcc----chhhhHHHHHHHHHHHHHHHHH--HHHhhhcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccC
Q 027181 124 PSSI----SIFQLPWLAFVVSILFVLLNGW--LRICKHQRREQEMIEFEVVEEIIYGLESGILFGMASVISKLGFVFLEQ 197 (227)
Q Consensus 124 ~~~~----~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~~~~~~~~~~~~~a~~lg~aaG~~fG~~Avl~K~~~~~~~~ 197 (227)
.+.. ...........+ +....+-+. .+..+--++.. .....|-+-+ -.-|+.+.+.....+......+.
T Consensus 100 ~~~~~~~~~~~~~~~G~~~v-l~~~~~S~~agVy~E~~lK~~~---~s~~~~N~qL-~~~gi~~~~~~~~~~~~~~~~~~ 174 (244)
T PF04142_consen 100 SSSVHHDASNQNPLLGLLAV-LAAAFLSGFAGVYFEKLLKRSN---VSLWIQNMQL-YLFGILFNLLALLLSDGSAISES 174 (244)
T ss_pred ccccccccccchhHhHHHHH-HHHHHHHHHHHHHHHHHhcccc---hhHHHHHHHH-HHHHHHHHHHHHhcccccccccC
Confidence 1110 111211111111 111111111 11111112211 1123344444 34566666666666655555566
Q ss_pred CccccchHHHHHHHHHhhhhhhe
Q 027181 198 GFPTMLVPVCISISICCSGTGFY 220 (227)
Q Consensus 198 g~~~l~~~~~~~~~v~~~~~g~~ 220 (227)
|+.+-++++.+.....-+..|..
T Consensus 175 g~f~G~~~~~~~~i~~~a~gGll 197 (244)
T PF04142_consen 175 GFFHGYSWWVWIVIFLQAIGGLL 197 (244)
T ss_pred CchhhcchHHHHHHHHHHHhhHH
Confidence 77777888877765555555543
No 8
>COG2510 Predicted membrane protein [Function unknown]
Probab=98.52 E-value=5.1e-07 Score=72.72 Aligned_cols=115 Identities=24% Similarity=0.373 Sum_probs=89.4
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhhccCCCC-chhHHHHH-------HHhhhhh-----------HH---HHHHHHHHH
Q 027181 1 MWELICLTLAATAGNNIGKVLQKKGTVILPPL-SFKLKVIR-------AYAVNKA-----------WV---IGFLMDIFG 58 (227)
Q Consensus 1 ~~~av~lAl~aA~~~a~g~vlQ~~aa~~~~~~-~~~~~~~~-------~llr~~~-----------W~---~G~~~~~~G 58 (227)
|.-.+..|++||+..+....+-|.+-+...+. ..--|.+. -.+...+ |. .+-+...++
T Consensus 1 m~~~~~~ALLsA~fa~L~~iF~KIGl~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~gls 80 (140)
T COG2510 1 MMAAIIYALLSALFAGLTPIFAKIGLEGVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLS 80 (140)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHhccccCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHH
Confidence 44567899999999999999999998765432 11111111 1111112 22 223567889
Q ss_pred HHHHHHHHhhcchhHHHhhhhHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHh
Q 027181 59 ALLMLRALSQAPVSVIQPVSGCGLAILSIFSHFYLKEVMNAVDWMGITLAGIGTIGV 115 (227)
Q Consensus 59 ~~l~~~AL~~~plsvVQpl~~~~l~~t~~ls~~~l~~rl~~~ew~gv~l~~~Gv~~l 115 (227)
..+.+.|+..++.|.|-|+--.+.+++..+|..++|||+|..+|+|+.+++.|.+++
T Consensus 81 wl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailv 137 (140)
T COG2510 81 WLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILV 137 (140)
T ss_pred HHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeE
Confidence 999999999999999999999999999999999999999999999999999998776
No 9
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=98.42 E-value=1e-05 Score=71.72 Aligned_cols=113 Identities=16% Similarity=0.277 Sum_probs=86.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCCCCch--h--HHH-H--HHH-------hh--hhhHH----HHHHHHHHHHHHHH
Q 027181 4 LICLTLAATAGNNIGKVLQKKGTVILPPLSF--K--LKV-I--RAY-------AV--NKAWV----IGFLMDIFGALLML 63 (227)
Q Consensus 4 av~lAl~aA~~~a~g~vlQ~~aa~~~~~~~~--~--~~~-~--~~l-------lr--~~~W~----~G~~~~~~G~~l~~ 63 (227)
+.++.+.+|++++..+.+.||..++.+.... . ... + ... .+ ++.|+ .+.......+.+.+
T Consensus 2 ~~~~~~~aa~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (281)
T TIGR03340 2 ALTLVVFSALMHAGWNLMAKSHADKEPDFLWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLGLA 81 (281)
T ss_pred cHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHHHH
Confidence 4678899999999999999988766443211 0 000 0 001 11 11222 23345777888999
Q ss_pred HHHhhcchhHHHhhhhHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhc
Q 027181 64 RALSQAPVSVIQPVSGCGLAILSIFSHFYLKEVMNAVDWMGITLAGIGTIGVG 116 (227)
Q Consensus 64 ~AL~~~plsvVQpl~~~~l~~t~~ls~~~l~~rl~~~ew~gv~l~~~Gv~~l~ 116 (227)
.|+...|.+.++|+...+-+++.+++..++|||+++++|.|+.++..|+.++.
T Consensus 82 ~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~ 134 (281)
T TIGR03340 82 QAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLG 134 (281)
T ss_pred HHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999998775
No 10
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=98.32 E-value=2.1e-05 Score=62.62 Aligned_cols=97 Identities=19% Similarity=0.256 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHhhh-hHHHHH
Q 027181 6 CLTLAATAGNNIGKVLQKKGTVILPPLSFKLKVIRAYAVNKAWVIGFLMDIFGALLMLRALSQAPVSVIQPVS-GCGLAI 84 (227)
Q Consensus 6 ~lAl~aA~~~a~g~vlQ~~aa~~~~~~~~~~~~~~~llr~~~W~~G~~~~~~G~~l~~~AL~~~plsvVQpl~-~~~l~~ 84 (227)
++=++|.++--.++...|.+.... +..+|...+.+..+++.+...|+...|+++.+|+- +.+.+.
T Consensus 5 l~L~~Ai~~Ev~~t~~LK~s~g~~--------------~~~~~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~ 70 (120)
T PRK10452 5 ILLALAIATEITGTLSMKWASVSE--------------GNGGFILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILF 70 (120)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCC--------------CcHHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHH
Confidence 334455666677777777663221 11236678889999999999999999999999996 799999
Q ss_pred HHHHHHHHhccccchhHHHHHHHHHHHHHHhc
Q 027181 85 LSIFSHFYLKEVMNAVDWMGITLAGIGTIGVG 116 (227)
Q Consensus 85 t~~ls~~~l~~rl~~~ew~gv~l~~~Gv~~l~ 116 (227)
+..++.+++||+++..++.|+.++++|++++-
T Consensus 71 ~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~ 102 (120)
T PRK10452 71 ITLFSVLLFDESLSLMKIAGLTTLVAGIVLIK 102 (120)
T ss_pred HHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999998884
No 11
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=98.24 E-value=2.6e-06 Score=76.90 Aligned_cols=103 Identities=20% Similarity=0.304 Sum_probs=83.9
Q ss_pred HHHHHHHHHHHhhhccCCCCchhHHHHHH----HhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHhhhhHHHHHHHHH
Q 027181 13 AGNNIGKVLQKKGTVILPPLSFKLKVIRA----YAVNKAWVIGFLMDIFGALLMLRALSQAPVSVIQPVSGCGLAILSIF 88 (227)
Q Consensus 13 ~~~a~g~vlQ~~aa~~~~~~~~~~~~~~~----llr~~~W~~G~~~~~~G~~l~~~AL~~~plsvVQpl~~~~l~~t~~l 88 (227)
+|.++=.+++.|+.++....+. ..+.. -++-..+..+.+||+.|+.+++++|.+-..|-.|++++.-++|+.++
T Consensus 52 lCl~vf~lir~~sn~~g~~s~~--~~ilsq~~~pf~p~lfl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglf 129 (372)
T KOG3912|consen 52 LCLAVFKLIRLRSNGQGVSSDL--DSILSQDSSPFNPVLFLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLF 129 (372)
T ss_pred HHHHHHHHHHHhhcCCCccccc--ccccccccCCCCcceecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHH
Confidence 6777777888888765332221 11111 12223477899999999999999999999999999999999999999
Q ss_pred HHHHhccccchhHHHHHHHHHHHHHHhcc
Q 027181 89 SHFYLKEVMNAVDWMGITLAGIGTIGVGA 117 (227)
Q Consensus 89 s~~~l~~rl~~~ew~gv~l~~~Gv~~l~~ 117 (227)
|.-+++++++.++|.|+..+..|+++++.
T Consensus 130 st~~Ln~ti~~~qWl~i~fv~lGlviVg~ 158 (372)
T KOG3912|consen 130 STMFLNRTITGRQWLGILFVSLGLVIVGS 158 (372)
T ss_pred HHHHHhcccchhhHHHHHHHHhhhheeee
Confidence 99999999999999999999999999973
No 12
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=98.13 E-value=7.9e-05 Score=68.84 Aligned_cols=64 Identities=20% Similarity=0.315 Sum_probs=61.7
Q ss_pred HHHHHHHHHHHHHHhhcchhHHHhhhhHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhc
Q 027181 53 LMDIFGALLMLRALSQAPVSVIQPVSGCGLAILSIFSHFYLKEVMNAVDWMGITLAGIGTIGVG 116 (227)
Q Consensus 53 ~~~~~G~~l~~~AL~~~plsvVQpl~~~~l~~t~~ls~~~l~~rl~~~ew~gv~l~~~Gv~~l~ 116 (227)
.+|..|-.+...|+.+-+++-+|.+.+.+.+++.++|..++|+|.+..+|.|+.+++.|++++.
T Consensus 87 ~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~ 150 (334)
T PF06027_consen 87 LLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVV 150 (334)
T ss_pred HHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhee
Confidence 4799999999999999999999999999999999999999999999999999999999998876
No 13
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=98.03 E-value=0.00018 Score=56.41 Aligned_cols=96 Identities=17% Similarity=0.206 Sum_probs=79.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccCCCCchhHHHHHHHhhhhh-HHHHHHHHHHHHHHHHHHHhhcchhHHHhhh-hHHHH
Q 027181 6 CLTLAATAGNNIGKVLQKKGTVILPPLSFKLKVIRAYAVNKA-WVIGFLMDIFGALLMLRALSQAPVSVIQPVS-GCGLA 83 (227)
Q Consensus 6 ~lAl~aA~~~a~g~vlQ~~aa~~~~~~~~~~~~~~~llr~~~-W~~G~~~~~~G~~l~~~AL~~~plsvVQpl~-~~~l~ 83 (227)
++=++|.++--.++...|.+..- +++. +...+.++.+.+.+...|+...|+++.+|+- +.+.+
T Consensus 5 l~L~~a~~~Ev~~~~~lK~s~gf---------------~~~~~~i~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v 69 (110)
T PRK09541 5 IYLGGAILAEVIGTTLMKFSEGF---------------TRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIV 69 (110)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCC---------------CchhHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHH
Confidence 34456677777778777776311 1222 3467778999999999999999999999995 68999
Q ss_pred HHHHHHHHHhccccchhHHHHHHHHHHHHHHhc
Q 027181 84 ILSIFSHFYLKEVMNAVDWMGITLAGIGTIGVG 116 (227)
Q Consensus 84 ~t~~ls~~~l~~rl~~~ew~gv~l~~~Gv~~l~ 116 (227)
.+.+.+.+++||+++..++.|+.+++.|++++-
T Consensus 70 ~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~ 102 (110)
T PRK09541 70 LISLLSWGFFGQRLDLPAIIGMMLICAGVLVIN 102 (110)
T ss_pred HHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999884
No 14
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=98.00 E-value=0.00027 Score=63.12 Aligned_cols=114 Identities=15% Similarity=0.184 Sum_probs=88.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCCCCchhH-H-------HHHHHhh------h-hh----HHHHHHHHHHHHHHHH
Q 027181 3 ELICLTLAATAGNNIGKVLQKKGTVILPPLSFKL-K-------VIRAYAV------N-KA----WVIGFLMDIFGALLML 63 (227)
Q Consensus 3 ~av~lAl~aA~~~a~g~vlQ~~aa~~~~~~~~~~-~-------~~~~llr------~-~~----W~~G~~~~~~G~~l~~ 63 (227)
.|.+++++++++++...++.|+..++.+...... . ....... + .. ...|+....+++.+++
T Consensus 148 ~G~ll~l~aa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~lgv~~t~~~~~l~~ 227 (293)
T PRK10532 148 TGAALALGAGACWAIYILSGQRAGAEHGPATVAIGSLIAALIFVPIGALQAGEALWHWSILPLGLAVAILSTALPYSLEM 227 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHccCcccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5889999999999999999888765433221100 0 0000111 1 11 3466677889999999
Q ss_pred HHHhhcchhHHHhhhhHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhc
Q 027181 64 RALSQAPVSVIQPVSGCGLAILSIFSHFYLKEVMNAVDWMGITLAGIGTIGVG 116 (227)
Q Consensus 64 ~AL~~~plsvVQpl~~~~l~~t~~ls~~~l~~rl~~~ew~gv~l~~~Gv~~l~ 116 (227)
.++...|.+.+.++...+-+++.+++.+++||+++..+|+|.+++..|.+...
T Consensus 228 ~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~ 280 (293)
T PRK10532 228 IALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGST 280 (293)
T ss_pred HHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999887775
No 15
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=97.97 E-value=9.4e-05 Score=55.93 Aligned_cols=85 Identities=21% Similarity=0.291 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHHHhhhccCCCCchhHHHHHHHhhhhhHH-HHHHHHHHHHHHHHHHHhhcchhHHHhhh-hHHHHHHH
Q 027181 9 LAATAGNNIGKVLQKKGTVILPPLSFKLKVIRAYAVNKAWV-IGFLMDIFGALLMLRALSQAPVSVIQPVS-GCGLAILS 86 (227)
Q Consensus 9 l~aA~~~a~g~vlQ~~aa~~~~~~~~~~~~~~~llr~~~W~-~G~~~~~~G~~l~~~AL~~~plsvVQpl~-~~~l~~t~ 86 (227)
++|.++...++...|.+.. .+++.|. ....++..++.+...|+...|+++.+|+. +.+.+.+.
T Consensus 7 ~~a~~~ev~~~~~lK~s~g---------------~~~~~~~~~~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~ 71 (93)
T PF00893_consen 7 LLAILFEVVGTIALKASHG---------------FTQLIPTILAVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVT 71 (93)
T ss_dssp HHHHHHHHHHHHH-----------------------------HHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHh---------------hcchhhHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHH
Confidence 4556667777877777321 1223333 45558999999999999999999999997 59999999
Q ss_pred HHHHHHhccccchhHHHHHHHH
Q 027181 87 IFSHFYLKEVMNAVDWMGITLA 108 (227)
Q Consensus 87 ~ls~~~l~~rl~~~ew~gv~l~ 108 (227)
+.+.+++||++|..+|.|+.++
T Consensus 72 ~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 72 LVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHH--------HHHHHHH
T ss_pred HHHHHHhCCCCCHHHHhheeeC
Confidence 9999999999999999999864
No 16
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=97.95 E-value=0.00023 Score=61.41 Aligned_cols=111 Identities=16% Similarity=0.138 Sum_probs=86.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhccCCCCc--hhH-H--------HHHHHhh-------hhhHH----HHHHHHHHHH
Q 027181 2 WELICLTLAATAGNNIGKVLQKKGTVILPPLS--FKL-K--------VIRAYAV-------NKAWV----IGFLMDIFGA 59 (227)
Q Consensus 2 ~~av~lAl~aA~~~a~g~vlQ~~aa~~~~~~~--~~~-~--------~~~~llr-------~~~W~----~G~~~~~~G~ 59 (227)
+.++.++++++++++..++++|+..++.+... ... + ....+.. ++.|. .+.....+++
T Consensus 127 ~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (260)
T TIGR00950 127 PAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNPQALSLQWGALLYLGLIGTALAY 206 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHH
Confidence 35888999999999999999999876544211 100 0 0011111 11232 3444567899
Q ss_pred HHHHHHHhhcchhHHHhhhhHHHHHHHHHHHHHhccccchhHHHHHHHHHHHH
Q 027181 60 LLMLRALSQAPVSVIQPVSGCGLAILSIFSHFYLKEVMNAVDWMGITLAGIGT 112 (227)
Q Consensus 60 ~l~~~AL~~~plsvVQpl~~~~l~~t~~ls~~~l~~rl~~~ew~gv~l~~~Gv 112 (227)
.+++.++...|.+.+..+...+-+++.+++..++||+++..+|.|+.++..|+
T Consensus 207 ~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 207 FLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999998875
No 17
>PRK11689 aromatic amino acid exporter; Provisional
Probab=97.85 E-value=0.00048 Score=61.59 Aligned_cols=112 Identities=10% Similarity=0.047 Sum_probs=85.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCCCCch-----hHHHHH-HHh-------hhh-hHH----HHHHHHHHHHHHHHH
Q 027181 3 ELICLTLAATAGNNIGKVLQKKGTVILPPLSF-----KLKVIR-AYA-------VNK-AWV----IGFLMDIFGALLMLR 64 (227)
Q Consensus 3 ~av~lAl~aA~~~a~g~vlQ~~aa~~~~~~~~-----~~~~~~-~ll-------r~~-~W~----~G~~~~~~G~~l~~~ 64 (227)
.+..++++|++|++.+++++||-.++.+.... ..-... ... -++ .|. .| ....+++.++..
T Consensus 156 ~G~~~~l~aa~~~A~~~v~~k~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~-~~t~~~~~l~~~ 234 (295)
T PRK11689 156 LSYGLAFIGAFIWAAYCNVTRKYARGKNGITLFFILTALALWIKYFLSPQPAMVFSLPAIIKLLLAA-AAMGFGYAAWNV 234 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHhcCccccCCHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 37789999999999999999997654332111 000000 000 011 122 22 246778999999
Q ss_pred HHhhcchhHHHhhhhHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHh
Q 027181 65 ALSQAPVSVIQPVSGCGLAILSIFSHFYLKEVMNAVDWMGITLAGIGTIGV 115 (227)
Q Consensus 65 AL~~~plsvVQpl~~~~l~~t~~ls~~~l~~rl~~~ew~gv~l~~~Gv~~l 115 (227)
++...|.+.+.+..-.+-+++.+++..++||+++..+|+|.+++..|+.+.
T Consensus 235 al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~ 285 (295)
T PRK11689 235 GILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLC 285 (295)
T ss_pred HHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHH
Confidence 999999999999999999999999999999999999999999999998665
No 18
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=97.81 E-value=6.8e-05 Score=56.69 Aligned_cols=66 Identities=23% Similarity=0.296 Sum_probs=61.1
Q ss_pred HHHHHHHHHHHHHHHHHhhcchhHHHhhhhHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHh
Q 027181 50 IGFLMDIFGALLMLRALSQAPVSVIQPVSGCGLAILSIFSHFYLKEVMNAVDWMGITLAGIGTIGV 115 (227)
Q Consensus 50 ~G~~~~~~G~~l~~~AL~~~plsvVQpl~~~~l~~t~~ls~~~l~~rl~~~ew~gv~l~~~Gv~~l 115 (227)
.|......++.+...++...|.+.+.++...+-+++.+++..++||+++.++|.|+.+++.|+.++
T Consensus 59 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~ 124 (126)
T PF00892_consen 59 LGLLGTALAYLLYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI 124 (126)
T ss_pred hhccceehHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence 444457899999999999999999999999999999999999999999999999999999998765
No 19
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.81 E-value=0.00072 Score=53.02 Aligned_cols=97 Identities=14% Similarity=0.156 Sum_probs=74.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCCCCchhHHHHHHHhhhhhHH-HHHHHHHHHHHHHHHHHhhcchhHHHhhh-hHH
Q 027181 4 LICLTLAATAGNNIGKVLQKKGTVILPPLSFKLKVIRAYAVNKAWV-IGFLMDIFGALLMLRALSQAPVSVIQPVS-GCG 81 (227)
Q Consensus 4 av~lAl~aA~~~a~g~vlQ~~aa~~~~~~~~~~~~~~~llr~~~W~-~G~~~~~~G~~l~~~AL~~~plsvVQpl~-~~~ 81 (227)
+...=++|.++--.++...|.+.. .++|.|. .-..+..+.+.+...|+...|+++.+++- +.+
T Consensus 8 ~~~~L~~Ai~~Ev~~t~~Lk~s~g---------------f~~~~~~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG 72 (109)
T PRK10650 8 HAAWLALAIVLEIVANIFLKFSDG---------------FRRKIYGILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFG 72 (109)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC---------------CcchHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHH
Confidence 334444556666666666665521 1233333 33446888999999999999999999996 689
Q ss_pred HHHHHHHHHHHhccccchhHHHHHHHHHHHHHHh
Q 027181 82 LAILSIFSHFYLKEVMNAVDWMGITLAGIGTIGV 115 (227)
Q Consensus 82 l~~t~~ls~~~l~~rl~~~ew~gv~l~~~Gv~~l 115 (227)
.+.+.+.+.+++||+++..++.|+.+++.|++.+
T Consensus 73 ~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 73 IAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999876
No 20
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=97.81 E-value=0.00051 Score=61.42 Aligned_cols=114 Identities=14% Similarity=0.080 Sum_probs=85.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhccCCCCch-hHH-------HH------------HHHhhhhhH----HHHHHHHHH
Q 027181 2 WELICLTLAATAGNNIGKVLQKKGTVILPPLSF-KLK-------VI------------RAYAVNKAW----VIGFLMDIF 57 (227)
Q Consensus 2 ~~av~lAl~aA~~~a~g~vlQ~~aa~~~~~~~~-~~~-------~~------------~~llr~~~W----~~G~~~~~~ 57 (227)
..++.+.++++++.+.....-|.. .+.|..+. -.| .+ ++..+++++ ..+......
T Consensus 7 ~~g~~~~l~a~~~wg~~~~~~k~~-~~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (296)
T PRK15430 7 RQGVLLALAAYFIWGIAPAYFKLI-YYVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAVLIGG 85 (296)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 457888899999998888777654 33332221 001 00 000112222 145556778
Q ss_pred HHHHHHHHHhhcchhHHHhhhhHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhc
Q 027181 58 GALLMLRALSQAPVSVIQPVSGCGLAILSIFSHFYLKEVMNAVDWMGITLAGIGTIGVG 116 (227)
Q Consensus 58 G~~l~~~AL~~~plsvVQpl~~~~l~~t~~ls~~~l~~rl~~~ew~gv~l~~~Gv~~l~ 116 (227)
.+.+++.|+...|.+....+..+.=+++.+++..++|||+++++|.|+.+..+|++++.
T Consensus 86 ~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~ 144 (296)
T PRK15430 86 NWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL 144 (296)
T ss_pred HHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999998774
No 21
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=97.80 E-value=0.00015 Score=64.19 Aligned_cols=112 Identities=18% Similarity=0.252 Sum_probs=83.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCCCCc-h----hHHH--------HHHH--------hhhhhHH----HHHHHHHHH
Q 027181 4 LICLTLAATAGNNIGKVLQKKGTVILPPLS-F----KLKV--------IRAY--------AVNKAWV----IGFLMDIFG 58 (227)
Q Consensus 4 av~lAl~aA~~~a~g~vlQ~~aa~~~~~~~-~----~~~~--------~~~l--------lr~~~W~----~G~~~~~~G 58 (227)
++.+++++++|++..+++.|+..++.++.. . .... .... ..++.|+ .+.....++
T Consensus 145 g~~~~l~aal~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~l~ 224 (281)
T TIGR03340 145 AYAWALAAALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGRSMFPYARQILPSATLGGLMIGGA 224 (281)
T ss_pred HHHHHHHHHHHHHHhhhhccccccchhcccccHHHHHHHHHHHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHHHH
Confidence 556789999999999999888654433211 0 0000 0000 0011122 334457788
Q ss_pred HHHHHHHHhhcchhHHHhhhhHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHh
Q 027181 59 ALLMLRALSQAPVSVIQPVSGCGLAILSIFSHFYLKEVMNAVDWMGITLAGIGTIGV 115 (227)
Q Consensus 59 ~~l~~~AL~~~plsvVQpl~~~~l~~t~~ls~~~l~~rl~~~ew~gv~l~~~Gv~~l 115 (227)
+.+++.+++..|.+.+.++.-.+-+++.+++.+++||+++..+|+|..++..|+.++
T Consensus 225 ~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l~ 281 (281)
T TIGR03340 225 YALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVVL 281 (281)
T ss_pred HHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHhC
Confidence 999999999999999999999999999999999999999999999999999998763
No 22
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=97.79 E-value=0.0005 Score=59.30 Aligned_cols=68 Identities=16% Similarity=0.082 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHHHHHHhhcchhHHHhhhhHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhcc
Q 027181 50 IGFLMDIFGALLMLRALSQAPVSVIQPVSGCGLAILSIFSHFYLKEVMNAVDWMGITLAGIGTIGVGA 117 (227)
Q Consensus 50 ~G~~~~~~G~~l~~~AL~~~plsvVQpl~~~~l~~t~~ls~~~l~~rl~~~ew~gv~l~~~Gv~~l~~ 117 (227)
.|.....+...+.+.|+.+.|.+.+.++....=+++.+++..++|||+++++|.|+.+..+|+.++..
T Consensus 52 ~~~~~~~l~~~~~~~a~~~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~ 119 (260)
T TIGR00950 52 LGALQIGVFYVLYFVAVKRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLS 119 (260)
T ss_pred HHHHHHHHHHHHHHHHHHhcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhcc
Confidence 55556778889999999999999999999999999999999999999999999999999999988753
No 23
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=97.78 E-value=0.00079 Score=60.01 Aligned_cols=114 Identities=11% Similarity=0.131 Sum_probs=86.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCCCCch-------hHH-HHHHHh------h--h-hhHH----HHHHHHHHHHHH
Q 027181 3 ELICLTLAATAGNNIGKVLQKKGTVILPPLSF-------KLK-VIRAYA------V--N-KAWV----IGFLMDIFGALL 61 (227)
Q Consensus 3 ~av~lAl~aA~~~a~g~vlQ~~aa~~~~~~~~-------~~~-~~~~ll------r--~-~~W~----~G~~~~~~G~~l 61 (227)
.+.++++++++|++..++.+||..++.+.... ..- ...... . + ..|. .|.....+++.+
T Consensus 150 ~G~l~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~~~l 229 (292)
T PRK11272 150 WGAILILIASASWAFGSVWSSRLPLPVGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIAISA 229 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 58899999999999999999986543221100 000 000000 0 1 1233 344467788999
Q ss_pred HHHHHhhcchhHHHhhhhHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhc
Q 027181 62 MLRALSQAPVSVIQPVSGCGLAILSIFSHFYLKEVMNAVDWMGITLAGIGTIGVG 116 (227)
Q Consensus 62 ~~~AL~~~plsvVQpl~~~~l~~t~~ls~~~l~~rl~~~ew~gv~l~~~Gv~~l~ 116 (227)
+..++...|.+.+..+...+-+++.+++..++||+++..+|+|..++..|+.+..
T Consensus 230 ~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~ 284 (292)
T PRK11272 230 YMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVT 284 (292)
T ss_pred HHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999998774
No 24
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=97.77 E-value=0.0023 Score=57.50 Aligned_cols=113 Identities=18% Similarity=0.114 Sum_probs=81.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCCCCch-hH--H-HHH----HHhhhh-----h-HHHHHHH---HHHHHHHHHHHH
Q 027181 4 LICLTLAATAGNNIGKVLQKKGTVILPPLSF-KL--K-VIR----AYAVNK-----A-WVIGFLM---DIFGALLMLRAL 66 (227)
Q Consensus 4 av~lAl~aA~~~a~g~vlQ~~aa~~~~~~~~-~~--~-~~~----~llr~~-----~-W~~G~~~---~~~G~~l~~~AL 66 (227)
+++++++++++.+.--+..|+-. ..+.... +. . .+. ...|+| . |..|+.. ...|..+++.|.
T Consensus 2 ~~l~~lia~~~wGs~g~~~k~~~-g~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~l~G~~w~ig~~~~~~ai 80 (290)
T TIGR00776 2 DILIALIPALFWGSFVLINVKIG-GGPYSQTLGTTFGALILSIAIAIFVLPEFWALSIFLVGLLSGAFWALGQINQFKSM 80 (290)
T ss_pred chHHHHHHHHHHhhhHHHHhccC-CCHHHHHHHHHHHHHHHHHHHHHHhCCcccccHHHHHHHHHHHHHHhhhhhHHHHH
Confidence 57889999999876555555432 2111110 00 1 000 112322 2 3446665 888889999999
Q ss_pred hhcchhHHHhhhh-HHHHHHHHHHHHHhccccchhH----HHHHHHHHHHHHHhcc
Q 027181 67 SQAPVSVIQPVSG-CGLAILSIFSHFYLKEVMNAVD----WMGITLAGIGTIGVGA 117 (227)
Q Consensus 67 ~~~plsvVQpl~~-~~l~~t~~ls~~~l~~rl~~~e----w~gv~l~~~Gv~~l~~ 117 (227)
....+++-.|+-. ..+++..+.+..++||+.+++| +.|+.++++|++++..
T Consensus 81 ~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~ 136 (290)
T TIGR00776 81 RYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSR 136 (290)
T ss_pred HHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEe
Confidence 9999999999987 8889999999999999999999 8899999999888753
No 25
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.74 E-value=0.00081 Score=52.33 Aligned_cols=68 Identities=24% Similarity=0.265 Sum_probs=62.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcchhHHHhhh-hHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHh
Q 027181 48 WVIGFLMDIFGALLMLRALSQAPVSVIQPVS-GCGLAILSIFSHFYLKEVMNAVDWMGITLAGIGTIGV 115 (227)
Q Consensus 48 W~~G~~~~~~G~~l~~~AL~~~plsvVQpl~-~~~l~~t~~ls~~~l~~rl~~~ew~gv~l~~~Gv~~l 115 (227)
+..-..+..+.+.+...|+...|+++.+++- +.+.+.+.+.+.+++||+++..++.|+.++..|++.+
T Consensus 32 ~~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l 100 (105)
T PRK11431 32 SIITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGL 100 (105)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhh
Confidence 3455668999999999999999999999996 6999999999999999999999999999999999887
No 26
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.71 E-value=0.0011 Score=51.90 Aligned_cols=68 Identities=19% Similarity=0.319 Sum_probs=62.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcchhHHHhhh-hHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHh
Q 027181 48 WVIGFLMDIFGALLMLRALSQAPVSVIQPVS-GCGLAILSIFSHFYLKEVMNAVDWMGITLAGIGTIGV 115 (227)
Q Consensus 48 W~~G~~~~~~G~~l~~~AL~~~plsvVQpl~-~~~l~~t~~ls~~~l~~rl~~~ew~gv~l~~~Gv~~l 115 (227)
...-..++.+.|.+...|+...|+++.+++- +.+.+.+...+..++||+++..++.|+.+++.|++.+
T Consensus 33 ~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~L 101 (106)
T COG2076 33 SILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGL 101 (106)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHh
Confidence 3456668999999999999999999999994 8999999999999999999999999999999999877
No 27
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=97.68 E-value=0.0026 Score=56.87 Aligned_cols=112 Identities=18% Similarity=0.215 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccCCCCch-hHHH------HHHHhhhh--hHH--H--HHHHHHHHHHHHHHHHhh-cc
Q 027181 5 ICLTLAATAGNNIGKVLQKKGTVILPPLSF-KLKV------IRAYAVNK--AWV--I--GFLMDIFGALLMLRALSQ-AP 70 (227)
Q Consensus 5 v~lAl~aA~~~a~g~vlQ~~aa~~~~~~~~-~~~~------~~~llr~~--~W~--~--G~~~~~~G~~l~~~AL~~-~p 70 (227)
.+++++++++.+.....-|.+..+.+.... -.|. +.-+.+++ .|. . |.......+.+.+.++.+ .|
T Consensus 6 ~l~~l~~~~~Wg~~~~~~k~~~~~~~p~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 85 (299)
T PRK11453 6 GVLALLVVVVWGLNFVVIKVGLHNMPPLMLAGLRFMLVAFPAIFFVARPKVPLNLLLGYGLTISFGQFAFLFCAINFGMP 85 (299)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 356778888888888888877766554321 1121 11112221 121 1 222223334566677777 58
Q ss_pred hhHHHhhhhHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhc
Q 027181 71 VSVIQPVSGCGLAILSIFSHFYLKEVMNAVDWMGITLAGIGTIGVG 116 (227)
Q Consensus 71 lsvVQpl~~~~l~~t~~ls~~~l~~rl~~~ew~gv~l~~~Gv~~l~ 116 (227)
.+....+....-+++.+++.+++|||+++++|.|+.+..+|+.++.
T Consensus 86 a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~ 131 (299)
T PRK11453 86 AGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLI 131 (299)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhc
Confidence 8888888888889999999999999999999999999999988775
No 28
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=97.67 E-value=0.0017 Score=58.14 Aligned_cols=114 Identities=17% Similarity=0.136 Sum_probs=85.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhccCCCCc-hh----HHH-------HHHHh-------------hhhh-HH----HH
Q 027181 2 WELICLTLAATAGNNIGKVLQKKGTVILPPLS-FK----LKV-------IRAYA-------------VNKA-WV----IG 51 (227)
Q Consensus 2 ~~av~lAl~aA~~~a~g~vlQ~~aa~~~~~~~-~~----~~~-------~~~ll-------------r~~~-W~----~G 51 (227)
+.++.++++++++++..+++||+-.++.++.. .. ... ..... .++. |+ .|
T Consensus 142 ~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 221 (299)
T PRK11453 142 MLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLA 221 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHH
Confidence 35889999999999999999998654322211 00 000 00000 0111 22 24
Q ss_pred HHHHHHHHHHHHHHHhhcchhHHHhhhhHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHh
Q 027181 52 FLMDIFGALLMLRALSQAPVSVIQPVSGCGLAILSIFSHFYLKEVMNAVDWMGITLAGIGTIGV 115 (227)
Q Consensus 52 ~~~~~~G~~l~~~AL~~~plsvVQpl~~~~l~~t~~ls~~~l~~rl~~~ew~gv~l~~~Gv~~l 115 (227)
+....+++.+++.++...+..-+.++...+=+++.+++..+++|+++..+|+|..+++.|+.+.
T Consensus 222 i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~ 285 (299)
T PRK11453 222 FVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYIN 285 (299)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHH
Confidence 4567788899999999889989999999999999999999999999999999999999998765
No 29
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=97.58 E-value=0.0032 Score=56.17 Aligned_cols=66 Identities=15% Similarity=0.239 Sum_probs=60.2
Q ss_pred HHHHHHHHHHHHHHHHHhhcchhHHHhhhhHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhc
Q 027181 50 IGFLMDIFGALLMLRALSQAPVSVIQPVSGCGLAILSIFSHFYLKEVMNAVDWMGITLAGIGTIGVG 116 (227)
Q Consensus 50 ~G~~~~~~G~~l~~~AL~~~plsvVQpl~~~~l~~t~~ls~~~l~~rl~~~ew~gv~l~~~Gv~~l~ 116 (227)
.|.. ......++..++.+.|.+..|.+..+.-+|+.+++.+++|||+++++|.|+.+.+.|+.+.+
T Consensus 71 ~g~~-~~~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~ 136 (302)
T TIGR00817 71 VAIV-HTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALAS 136 (302)
T ss_pred HHHH-HHHHHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhc
Confidence 4444 57778999999999999999999999999999999999999999999999999999997653
No 30
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=97.58 E-value=0.0017 Score=60.36 Aligned_cols=114 Identities=11% Similarity=0.083 Sum_probs=85.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCCCCch-h---------HHHHHHHhhh----hhHH-------HHHH----HHHH
Q 027181 3 ELICLTLAATAGNNIGKVLQKKGTVILPPLSF-K---------LKVIRAYAVN----KAWV-------IGFL----MDIF 57 (227)
Q Consensus 3 ~av~lAl~aA~~~a~g~vlQ~~aa~~~~~~~~-~---------~~~~~~llr~----~~W~-------~G~~----~~~~ 57 (227)
++..+++.|++|.++.+++|+|-.++-|+... . +-.+..+... +.|. ..+. ...+
T Consensus 189 lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~y~~i~t~l 268 (358)
T PLN00411 189 IGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDITLITIVTMAIITSV 268 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchHHHHHHHHHHHHHH
Confidence 47889999999999999999998776554210 0 0000111111 1121 1121 2345
Q ss_pred HHHHHHHHHhhcchhHHHhhhhHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhc
Q 027181 58 GALLMLRALSQAPVSVIQPVSGCGLAILSIFSHFYLKEVMNAVDWMGITLAGIGTIGVG 116 (227)
Q Consensus 58 G~~l~~~AL~~~plsvVQpl~~~~l~~t~~ls~~~l~~rl~~~ew~gv~l~~~Gv~~l~ 116 (227)
++.+|..++...+.+.+-+..-.+=+|+.+++..+++|+++..+++|.+++..|+.+..
T Consensus 269 ay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~ 327 (358)
T PLN00411 269 YYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVM 327 (358)
T ss_pred HHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHH
Confidence 88899999999999999999999999999999999999999999999999999998875
No 31
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=97.45 E-value=0.0036 Score=54.39 Aligned_cols=112 Identities=14% Similarity=0.115 Sum_probs=81.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCCCCch-hHH----H--HHH-------------Hhh---hhhHHH----HHHHHH
Q 027181 4 LICLTLAATAGNNIGKVLQKKGTVILPPLSF-KLK----V--IRA-------------YAV---NKAWVI----GFLMDI 56 (227)
Q Consensus 4 av~lAl~aA~~~a~g~vlQ~~aa~~~~~~~~-~~~----~--~~~-------------llr---~~~W~~----G~~~~~ 56 (227)
++.+.++++++.+...+..|. ..+.+..+. -.| . +.- ..+ ++.|+. ...+..
T Consensus 3 g~~~~i~a~~~wg~~~~~~k~-~~~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 81 (256)
T TIGR00688 3 GIIVSLLASFLFGYMYYYSKL-LKPLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLLIG 81 (256)
T ss_pred cHHHHHHHHHHHHHHHHHHHH-hccCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHHHH
Confidence 678889999999999888887 333333221 001 0 000 011 111221 122356
Q ss_pred HHHHHHHHHHhhcchhHHHhhhhHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhc
Q 027181 57 FGALLMLRALSQAPVSVIQPVSGCGLAILSIFSHFYLKEVMNAVDWMGITLAGIGTIGVG 116 (227)
Q Consensus 57 ~G~~l~~~AL~~~plsvVQpl~~~~l~~t~~ls~~~l~~rl~~~ew~gv~l~~~Gv~~l~ 116 (227)
....+.+.|+...|.+....+..+.=+++.+++.+++|||+++++|.++.+...|++++.
T Consensus 82 ~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~ 141 (256)
T TIGR00688 82 FNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI 141 (256)
T ss_pred HHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 778899999999999999999999999999999999999999999999999999987764
No 32
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=97.39 E-value=0.002 Score=57.91 Aligned_cols=69 Identities=13% Similarity=0.106 Sum_probs=65.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcchhHHHhhhhHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhc
Q 027181 48 WVIGFLMDIFGALLMLRALSQAPVSVIQPVSGCGLAILSIFSHFYLKEVMNAVDWMGITLAGIGTIGVG 116 (227)
Q Consensus 48 W~~G~~~~~~G~~l~~~AL~~~plsvVQpl~~~~l~~t~~ls~~~l~~rl~~~ew~gv~l~~~Gv~~l~ 116 (227)
|..-..++.++..++..||.+.|...-+....+.++++.+++..++|||.+++||.++.++++|+++..
T Consensus 67 ~~~~~~~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~ 135 (303)
T PF08449_consen 67 YAILSFLFFLASVLSNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFT 135 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheee
Confidence 556667899999999999999999999999999999999999999999999999999999999998886
No 33
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=97.35 E-value=0.0042 Score=53.37 Aligned_cols=69 Identities=23% Similarity=0.261 Sum_probs=62.6
Q ss_pred HHHHHHHHHHHHHHHHHhhcchhHHHhhhhHHHHHHHHHHH-HHhccccchhHHHHHHHHHHHHHHhccC
Q 027181 50 IGFLMDIFGALLMLRALSQAPVSVIQPVSGCGLAILSIFSH-FYLKEVMNAVDWMGITLAGIGTIGVGAG 118 (227)
Q Consensus 50 ~G~~~~~~G~~l~~~AL~~~plsvVQpl~~~~l~~t~~ls~-~~l~~rl~~~ew~gv~l~~~Gv~~l~~~ 118 (227)
.+......+..+.+.++...|.+..+++....-+++.+++. +++|||+++++|.++.+...|+.++...
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~ 144 (292)
T COG0697 75 LALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLG 144 (292)
T ss_pred HHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecC
Confidence 56667888999999999999999999999999999999997 7779999999999999999999888643
No 34
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=97.24 E-value=0.0091 Score=51.26 Aligned_cols=114 Identities=20% Similarity=0.240 Sum_probs=84.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhccCCCCchhH-------HHH--HHHhh------hh-hHH----HHHHHHHHHHHH
Q 027181 2 WELICLTLAATAGNNIGKVLQKKGTVILPPLSFKL-------KVI--RAYAV------NK-AWV----IGFLMDIFGALL 61 (227)
Q Consensus 2 ~~av~lAl~aA~~~a~g~vlQ~~aa~~~~~~~~~~-------~~~--~~llr------~~-~W~----~G~~~~~~G~~l 61 (227)
+.++.+++.++++.+..++.+++-. +.+...... ..+ ..... +. .|. .|.....+++.+
T Consensus 153 ~~g~~~~l~a~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~ 231 (292)
T COG0697 153 LLGLLLALAAALLWALYTALVKRLS-RLGPVTLALLLQLLLALLLLLLFFLSGFGAPILSRAWLLLLYLGVFSTGLAYLL 231 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHHhccccccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4688999999999999999999776 222111110 000 00011 11 122 333344568999
Q ss_pred HHHHHhhcchhHHHhhhhHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhc
Q 027181 62 MLRALSQAPVSVIQPVSGCGLAILSIFSHFYLKEVMNAVDWMGITLAGIGTIGVG 116 (227)
Q Consensus 62 ~~~AL~~~plsvVQpl~~~~l~~t~~ls~~~l~~rl~~~ew~gv~l~~~Gv~~l~ 116 (227)
++.++...|...+.++...+.+++..++..+++|+++..++.|+.++..|+.+..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~ 286 (292)
T COG0697 232 WYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLAS 286 (292)
T ss_pred HHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999987764
No 35
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=97.17 E-value=0.013 Score=52.32 Aligned_cols=109 Identities=11% Similarity=0.018 Sum_probs=78.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhccCCCCch------hH-HHHHH----------Hhhhhh-HHH----HHHHHHHHHHHHHH
Q 027181 7 LTLAATAGNNIGKVLQKKGTVILPPLSF------KL-KVIRA----------YAVNKA-WVI----GFLMDIFGALLMLR 64 (227)
Q Consensus 7 lAl~aA~~~a~g~vlQ~~aa~~~~~~~~------~~-~~~~~----------llr~~~-W~~----G~~~~~~G~~l~~~ 64 (227)
+.+.++++++..++++||...+...... .+ ..... ...+|. |+. ......+++.+...
T Consensus 153 ~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~i~~~~~~~ 232 (296)
T PRK15430 153 IALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAIADSSTSHMGQNPMSLNLLLIAAGIVTTVPLLCFTA 232 (296)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHccCCcccccCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5778999999999999987532211110 00 00000 001121 111 11145588999999
Q ss_pred HHhhcchhHHHhhhhHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHh
Q 027181 65 ALSQAPVSVIQPVSGCGLAILSIFSHFYLKEVMNAVDWMGITLAGIGTIGV 115 (227)
Q Consensus 65 AL~~~plsvVQpl~~~~l~~t~~ls~~~l~~rl~~~ew~gv~l~~~Gv~~l 115 (227)
+++..|.+.+.++.-.+-+++.+++..+++|+++..++.|.+++..++.++
T Consensus 233 a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~ 283 (296)
T PRK15430 233 AATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIF 283 (296)
T ss_pred HHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999997776555
No 36
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=97.11 E-value=0.007 Score=55.78 Aligned_cols=59 Identities=14% Similarity=0.160 Sum_probs=55.0
Q ss_pred HHHHHHHHHhhcchhHHHhhhhHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhc
Q 027181 58 GALLMLRALSQAPVSVIQPVSGCGLAILSIFSHFYLKEVMNAVDWMGITLAGIGTIGVG 116 (227)
Q Consensus 58 G~~l~~~AL~~~plsvVQpl~~~~l~~t~~ls~~~l~~rl~~~ew~gv~l~~~Gv~~l~ 116 (227)
+...+..++.+.|++..|.+...+=+|+++++.+++|||+++++|.++.+++.|+.+..
T Consensus 127 ~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~ 185 (350)
T PTZ00343 127 VHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALAS 185 (350)
T ss_pred HHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHhee
Confidence 45567799999999999999999999999999999999999999999999999998875
No 37
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=97.10 E-value=0.22 Score=46.34 Aligned_cols=166 Identities=17% Similarity=0.178 Sum_probs=103.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcchhHHHhhhhHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhc---cCCCCCCC
Q 027181 48 WVIGFLMDIFGALLMLRALSQAPVSVIQPVSGCGLAILSIFSHFYLKEVMNAVDWMGITLAGIGTIGVG---AGGEEQEP 124 (227)
Q Consensus 48 W~~G~~~~~~G~~l~~~AL~~~plsvVQpl~~~~l~~t~~ls~~~l~~rl~~~ew~gv~l~~~Gv~~l~---~~~~~~~~ 124 (227)
+-.+..++.+=--+|+++++..|.+..|..-..-+..|++++..+||||+++++|....+...|+.++- ..+.+...
T Consensus 95 ~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~~ 174 (345)
T KOG2234|consen 95 VSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAKS 174 (345)
T ss_pred HHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCccC
Confidence 566777887777799999999999999999999999999999999999999999999999999998884 11111111
Q ss_pred CccchhhhHHHHHHHHHHHHHHHH-HH--HHhhhcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCccc
Q 027181 125 SSISIFQLPWLAFVVSILFVLLNG-WL--RICKHQRREQEMIEFEVVEEIIYGLESGILFGMASVISKLGFVFLEQGFPT 201 (227)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~v~~~~-~~--~~~~~~~~~~~~~~~~~~~a~~lg~aaG~~fG~~Avl~K~~~~~~~~g~~~ 201 (227)
+.++ ... +.-...++ ..|... ++ +...--++.+. .-..|=+-+.. -|+.|++.....+..-....+|+..
T Consensus 175 ~~~~-~n~-~~G~~avl-~~c~~SgfAgvYfEkiLK~s~~---s~wi~NiqL~~-~g~~f~~l~~~~~d~~~i~~~gff~ 247 (345)
T KOG2234|consen 175 ESSA-QNP-FLGLVAVL-VACFLSGFAGVYFEKILKGSNV---SLWIRNIQLYF-FGILFNLLTILLQDGEAINEYGFFY 247 (345)
T ss_pred CCcc-cch-hhhHHHHH-HHHHHHHHHHHHHHHHHhcCCc---hHHHHHHHHHH-HHHHHHHHHHhhccccccccCCccc
Confidence 1111 111 11111111 222222 11 11111111000 01223333332 4777888887777544322567777
Q ss_pred cchHHHHHHHHHhhhhhhe
Q 027181 202 MLVPVCISISICCSGTGFY 220 (227)
Q Consensus 202 l~~~~~~~~~v~~~~~g~~ 220 (227)
-++...+.+.+.-+..|.+
T Consensus 248 G~s~~vw~vVl~~a~gGLl 266 (345)
T KOG2234|consen 248 GYSSIVWLVVLLNAVGGLL 266 (345)
T ss_pred cccHHHHHHHHHHhccchh
Confidence 7777777776666666654
No 38
>PRK11689 aromatic amino acid exporter; Provisional
Probab=97.07 E-value=0.021 Score=50.96 Aligned_cols=113 Identities=14% Similarity=-0.022 Sum_probs=74.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCCCCch-hHHH-----HHHHh------hhhhH---HHHHHHHHHHHHHHHHHHhh
Q 027181 4 LICLTLAATAGNNIGKVLQKKGTVILPPLSF-KLKV-----IRAYA------VNKAW---VIGFLMDIFGALLMLRALSQ 68 (227)
Q Consensus 4 av~lAl~aA~~~a~g~vlQ~~aa~~~~~~~~-~~~~-----~~~ll------r~~~W---~~G~~~~~~G~~l~~~AL~~ 68 (227)
+.++++.+.++-+.....-|.+..+.|+... ..|. +.-.. |+..| ..+.........+++.++.+
T Consensus 5 ~~l~~l~a~~~Wg~~~~~~k~~~~~~~P~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~a~~~ 84 (295)
T PRK11689 5 ATLIGLIAILLWSTMVGLIRGVSESLGPVGGAAMIYSVSGLLLLLTVGFPRLRQFPKRYLLAGGLLFVSYEICLALSLGY 84 (295)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 4567778888888888888888777765432 1111 11111 11112 12222233334445556543
Q ss_pred ----cchhHHHhhhhHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhc
Q 027181 69 ----APVSVIQPVSGCGLAILSIFSHFYLKEVMNAVDWMGITLAGIGTIGVG 116 (227)
Q Consensus 69 ----~plsvVQpl~~~~l~~t~~ls~~~l~~rl~~~ew~gv~l~~~Gv~~l~ 116 (227)
.|.+....+....=+++.+++..++|||+++++|.|+.+...|+.++.
T Consensus 85 ~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~ 136 (295)
T PRK11689 85 ANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVL 136 (295)
T ss_pred hhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhhee
Confidence 455556667777888999999999999999999999999999998875
No 39
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=96.90 E-value=0.021 Score=50.86 Aligned_cols=66 Identities=20% Similarity=0.318 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHHHHHHH-hhcchhHHHhhhhHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhc
Q 027181 50 IGFLMDIFGALLMLRAL-SQAPVSVIQPVSGCGLAILSIFSHFYLKEVMNAVDWMGITLAGIGTIGVG 116 (227)
Q Consensus 50 ~G~~~~~~G~~l~~~AL-~~~plsvVQpl~~~~l~~t~~ls~~~l~~rl~~~ew~gv~l~~~Gv~~l~ 116 (227)
.|......++.+.+.+. ...|.+....+....=+++.+++.+ +|||+++++|.|+.+..+|+.++.
T Consensus 74 ~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~ 140 (292)
T PRK11272 74 IGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLN 140 (292)
T ss_pred HHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHh
Confidence 34444445677888888 9999999999999999999999975 799999999999999999988774
No 40
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=96.59 E-value=0.042 Score=49.30 Aligned_cols=112 Identities=21% Similarity=0.146 Sum_probs=82.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhccCCCCch----hH-----HH--HHHH-----hhhhhHH----HHHHHHHHHHHH
Q 027181 2 WELICLTLAATAGNNIGKVLQKKGTVILPPLSF----KL-----KV--IRAY-----AVNKAWV----IGFLMDIFGALL 61 (227)
Q Consensus 2 ~~av~lAl~aA~~~a~g~vlQ~~aa~~~~~~~~----~~-----~~--~~~l-----lr~~~W~----~G~~~~~~G~~l 61 (227)
+.++..+++|+++++.-...=|... .++.+. -. .. ...+ ..++.++ .|+. -.+++.+
T Consensus 151 ~~Gi~~~l~sg~~y~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~-~~ia~~~ 227 (290)
T TIGR00776 151 KKGILLLLMSTIGYLVYVVVAKAFG--VDGLSVLLPQAIGMVIGGIIFNLGHILAKPLKKYAILLNILPGLM-WGIGNFF 227 (290)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHcC--CCcceehhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHH-HHHHHHH
Confidence 4689999999999988777766542 222111 00 00 0011 0111222 4444 5788888
Q ss_pred HHHHHh-hcchhHHHhhhhHHHHHHHHHHHHHhccccchhHH----HHHHHHHHHHHHhc
Q 027181 62 MLRALS-QAPVSVIQPVSGCGLAILSIFSHFYLKEVMNAVDW----MGITLAGIGTIGVG 116 (227)
Q Consensus 62 ~~~AL~-~~plsvVQpl~~~~l~~t~~ls~~~l~~rl~~~ew----~gv~l~~~Gv~~l~ 116 (227)
.+.++. ..+.+...++...+.+.+.+.+.+++||+.+++|+ .|.+++..|+.+.+
T Consensus 228 y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~ 287 (290)
T TIGR00776 228 YLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILG 287 (290)
T ss_pred HHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHh
Confidence 889999 99999999999999999999999999999999999 99999999987764
No 41
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=96.58 E-value=0.055 Score=48.62 Aligned_cols=113 Identities=15% Similarity=0.197 Sum_probs=83.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCCCCc-hhHHHH--------------HHHhhhhhHH-HHH----HHHHHHHHHH
Q 027181 3 ELICLTLAATAGNNIGKVLQKKGTVILPPLS-FKLKVI--------------RAYAVNKAWV-IGF----LMDIFGALLM 62 (227)
Q Consensus 3 ~av~lAl~aA~~~a~g~vlQ~~aa~~~~~~~-~~~~~~--------------~~llr~~~W~-~G~----~~~~~G~~l~ 62 (227)
.++.+|+.+..|.+.=-+.-||..+..+... ...... ..-+.+|.-+ .++ .-..+=|.++
T Consensus 148 ~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~g~~g~a~gm~vAaviv~Pig~~~ag~~l~~p~ll~laLgvavlSSalPYsLE 227 (292)
T COG5006 148 VGVALALGAGACWALYIVLGQRAGRAEHGTAGVAVGMLVAALIVLPIGAAQAGPALFSPSLLPLALGVAVLSSALPYSLE 227 (292)
T ss_pred HHHHHHHHHhHHHHHHHHHcchhcccCCCchHHHHHHHHHHHHHhhhhhhhcchhhcChHHHHHHHHHHHHhcccchHHH
Confidence 4788999999999888888888886443321 111111 1112233322 222 3355567899
Q ss_pred HHHHhhcchhHHHhhhhHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHh
Q 027181 63 LRALSQAPVSVIQPVSGCGLAILSIFSHFYLKEVMNAVDWMGITLAGIGTIGV 115 (227)
Q Consensus 63 ~~AL~~~plsvVQpl~~~~l~~t~~ls~~~l~~rl~~~ew~gv~l~~~Gv~~l 115 (227)
.+||+-.|-...--+++.+=.+++..+..++||++|..||.++.+++.+....
T Consensus 228 miAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~ 280 (292)
T COG5006 228 MIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGS 280 (292)
T ss_pred HHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999988876544
No 42
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=96.08 E-value=1.2 Score=41.40 Aligned_cols=59 Identities=19% Similarity=0.186 Sum_probs=53.8
Q ss_pred HHHHHHHHHhhcchhHHHhhhhHHHHHHHHHHHHH------hccccchhHHHHHHHHHHHHHHhc
Q 027181 58 GALLMLRALSQAPVSVIQPVSGCGLAILSIFSHFY------LKEVMNAVDWMGITLAGIGTIGVG 116 (227)
Q Consensus 58 G~~l~~~AL~~~plsvVQpl~~~~l~~t~~ls~~~------l~~rl~~~ew~gv~l~~~Gv~~l~ 116 (227)
.+.+++.++.+.|.+..--+..+.=+++.++++++ +|||+++++|.|+.++..|+.++.
T Consensus 91 ~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~ 155 (358)
T PLN00411 91 YVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVI 155 (358)
T ss_pred HHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHH
Confidence 44578999999999999999999999999999999 699999999999999999987764
No 43
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=95.97 E-value=0.12 Score=46.04 Aligned_cols=115 Identities=10% Similarity=0.085 Sum_probs=77.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhc--cCCCCchhH-----HH----HHHHh-h-----h-------------hhHHHH
Q 027181 2 WELICLTLAATAGNNIGKVLQKKGTV--ILPPLSFKL-----KV----IRAYA-V-----N-------------KAWVIG 51 (227)
Q Consensus 2 ~~av~lAl~aA~~~a~g~vlQ~~aa~--~~~~~~~~~-----~~----~~~ll-r-----~-------------~~W~~G 51 (227)
+.|.+++++|++++++.++++||-.+ +.+...... .. ..... . . ..|...
T Consensus 144 ~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (302)
T TIGR00817 144 WAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVS 223 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHH
Confidence 45888999999999999999998765 322211100 00 00000 0 0 012112
Q ss_pred HHHHHHHH----HHHHHHHhhcchhHHHhhhhHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhc
Q 027181 52 FLMDIFGA----LLMLRALSQAPVSVIQPVSGCGLAILSIFSHFYLKEVMNAVDWMGITLAGIGTIGVG 116 (227)
Q Consensus 52 ~~~~~~G~----~l~~~AL~~~plsvVQpl~~~~l~~t~~ls~~~l~~rl~~~ew~gv~l~~~Gv~~l~ 116 (227)
.......+ .+++.++...+.+-........=+++..++..+++|+++..++.|..++..|+.+..
T Consensus 224 ~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~ 292 (302)
T TIGR00817 224 LVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYS 292 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHH
Confidence 11111122 344567888888888888888889999999999999999999999999999987774
No 44
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=95.60 E-value=1.3 Score=40.03 Aligned_cols=168 Identities=14% Similarity=0.236 Sum_probs=102.3
Q ss_pred HHHHHH---HHHHHHHHHHHHHhhcchhHHHhhh-hHHHHHHHHHHHHHhccccchhHHH----HHHHHHHHHHHhccCC
Q 027181 48 WVIGFL---MDIFGALLMLRALSQAPVSVIQPVS-GCGLAILSIFSHFYLKEVMNAVDWM----GITLAGIGTIGVGAGG 119 (227)
Q Consensus 48 W~~G~~---~~~~G~~l~~~AL~~~plsvVQpl~-~~~l~~t~~ls~~~l~~rl~~~ew~----gv~l~~~Gv~~l~~~~ 119 (227)
|+.+++ +-.+|..+|+.++...-+|.-.|+. +..|+.+.+.+.+++||.-+..++. +++++++|+.+-...+
T Consensus 45 ~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~ 124 (269)
T PF06800_consen 45 FIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQD 124 (269)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcccc
Confidence 444444 5678999999999999999999997 8899999999999999988888876 4555667766665222
Q ss_pred CCCC-C-CccchhhhHHHHHHHHHHHH-----------------------HHHHHHHHhh-hcchhhhHHHHHHHHHHHH
Q 027181 120 EEQE-P-SSISIFQLPWLAFVVSILFV-----------------------LLNGWLRICK-HQRREQEMIEFEVVEEIIY 173 (227)
Q Consensus 120 ~~~~-~-~~~~~~~~~~~~~~~~~~~v-----------------------~~~~~~~~~~-~~~~~~~~~~~~~~~a~~l 173 (227)
++++ . ++....+-....+...+.-. .+.+...... .++.. ..+....
T Consensus 125 ~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~~~~~~~~~~lPqaiGm~i~a~i~~~~~~~~~-------~~k~~~~ 197 (269)
T PF06800_consen 125 KKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKAFHVSGWSAFLPQAIGMLIGAFIFNLFSKKPF-------FEKKSWK 197 (269)
T ss_pred ccccccccccchhhHHHHHHHHHHHHHHHHHHHHhcCCChhHhHHHHHHHHHHHHHHHhhcccccc-------cccchHH
Confidence 2211 1 11111111000010000000 0000000011 01111 1134677
Q ss_pred HHHHHHHHHHHHHHHHHhhhhccCCccccchHHHHHHHHHhhhhhheeeeee
Q 027181 174 GLESGILFGMASVISKLGFVFLEQGFPTMLVPVCISISICCSGTGFYYQVRV 225 (227)
Q Consensus 174 g~aaG~~fG~~Avl~K~~~~~~~~g~~~l~~~~~~~~~v~~~~~g~~~qt~~ 225 (227)
...+|+.|+..+...=...+ .-|...-+...+..+ ++.+..|.++-.-.
T Consensus 198 nil~G~~w~ignl~~~is~~--~~G~a~af~lSQ~~v-vIStlgGI~il~E~ 246 (269)
T PF06800_consen 198 NILTGLIWGIGNLFYLISAQ--KNGVATAFTLSQLGV-VISTLGGIFILKEK 246 (269)
T ss_pred hhHHHHHHHHHHHHHHHhHH--hccchhhhhHHhHHH-HHHHhhhheEEEec
Confidence 89999999999998866554 336666677777776 68888888865443
No 45
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=95.00 E-value=0.074 Score=41.86 Aligned_cols=77 Identities=25% Similarity=0.406 Sum_probs=65.4
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHhhh-hHHHHHHHHHHHHHhcccc-chhHHHHHHHHHHHHHH
Q 027181 37 KVIRAYAVNKAWVIGFLMDIFGALLMLRALSQAPVSVIQPVS-GCGLAILSIFSHFYLKEVM-NAVDWMGITLAGIGTIG 114 (227)
Q Consensus 37 ~~~~~llr~~~W~~G~~~~~~G~~l~~~AL~~~plsvVQpl~-~~~l~~t~~ls~~~l~~rl-~~~ew~gv~l~~~Gv~~ 114 (227)
+....++.+..++.+++++-.|+.+.+.-|+..|+++.-|+. +....||+..+..+ +|++ .++...|..+++.|+.+
T Consensus 44 qe~~tl~l~w~Y~iPFllNqcgSaly~~tLa~a~islavpv~nsltfafta~~G~~L-GE~~~g~~a~lGt~liv~Gi~L 122 (125)
T KOG4831|consen 44 QEMKTLFLNWEYLIPFLLNQCGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKAL-GEETQGGLALLGTSLIVFGIWL 122 (125)
T ss_pred HHHHHHHHhHHHHHHHHHHHhhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHh-ccccccceeehhhhHHhhhhhh
Confidence 566778888999999999999999999999999999999997 77999999988765 5554 46667788888888753
No 46
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=94.21 E-value=0.82 Score=42.44 Aligned_cols=115 Identities=16% Similarity=0.110 Sum_probs=73.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhccCCCCch--hHHHH-------------HHHhhhhhHHHHHHHHHHHHH-HHHHH
Q 027181 2 WELICLTLAATAGNNIGKVLQKKGTVILPPLSF--KLKVI-------------RAYAVNKAWVIGFLMDIFGAL-LMLRA 65 (227)
Q Consensus 2 ~~av~lAl~aA~~~a~g~vlQ~~aa~~~~~~~~--~~~~~-------------~~llr~~~W~~G~~~~~~G~~-l~~~A 65 (227)
.+|-+++++||.++++.+|+|++-.++.|..+. -.+.. +.-+++-.|-.......+|+. +++.-
T Consensus 167 i~GDll~l~~a~lya~~nV~~E~~v~~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~~~~~lf~~ 246 (334)
T PF06027_consen 167 ILGDLLALLGAILYAVSNVLEEKLVKKAPRVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIGLLVGYALCLFLF 246 (334)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHHHHHHHHHHHHHH
Confidence 357789999999999999999999887654321 00000 001111123222222333333 34444
Q ss_pred HhhcchhH-------HHhhhhHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhc
Q 027181 66 LSQAPVSV-------IQPVSGCGLAILSIFSHFYLKEVMNAVDWMGITLAGIGTIGVG 116 (227)
Q Consensus 66 L~~~plsv-------VQpl~~~~l~~t~~ls~~~l~~rl~~~ew~gv~l~~~Gv~~l~ 116 (227)
+...|..+ +..=+-++-+.++++..++.|++++..-+.|.+++++|+++..
T Consensus 247 y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~ 304 (334)
T PF06027_consen 247 YSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYN 304 (334)
T ss_pred HHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEE
Confidence 44444432 3333456677889999999999999999999999999988875
No 47
>PRK13499 rhamnose-proton symporter; Provisional
Probab=94.17 E-value=3.3 Score=38.72 Aligned_cols=114 Identities=18% Similarity=0.063 Sum_probs=80.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhccCC-C-----Cc-------------hhHHHHHHHhhh---hhHHHHHH---HHH
Q 027181 2 WELICLTLAATAGNNIGKVLQKKGTVILP-P-----LS-------------FKLKVIRAYAVN---KAWVIGFL---MDI 56 (227)
Q Consensus 2 ~~av~lAl~aA~~~a~g~vlQ~~aa~~~~-~-----~~-------------~~~~~~~~llr~---~~W~~G~~---~~~ 56 (227)
.++++..+++++|++.=.+-||+. ++=+ + .. ...+.+..++++ ..|..+++ +=.
T Consensus 6 ~~G~~~~~i~~~~~GS~~~p~K~~-k~w~wE~~W~v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~G~~W~ 84 (345)
T PRK13499 6 ILGIIWHLIGGASSGSFYAPFKKV-KKWSWETMWSVGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFLFGALWG 84 (345)
T ss_pred HHHHHHHHHHHHHhhccccccccc-CCCchhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 468999999999999888899883 3211 0 00 011223333332 23444443 567
Q ss_pred HHHHHHHHHHhhcchhHHHhhh-hHHHHHHHHHHHHHhcccc---chhH----HHHHHHHHHHHHHhc
Q 027181 57 FGALLMLRALSQAPVSVIQPVS-GCGLAILSIFSHFYLKEVM---NAVD----WMGITLAGIGTIGVG 116 (227)
Q Consensus 57 ~G~~l~~~AL~~~plsvVQpl~-~~~l~~t~~ls~~~l~~rl---~~~e----w~gv~l~~~Gv~~l~ 116 (227)
+|-..|..+..+.-+|+-+|+. +..++++.++...++||-- +..+ ..|++++++|+++.+
T Consensus 85 iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s 152 (345)
T PRK13499 85 IGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVG 152 (345)
T ss_pred hhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHH
Confidence 8889999999999999999995 8899999999999998632 3333 457777888887776
No 48
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=94.11 E-value=0.42 Score=40.74 Aligned_cols=112 Identities=14% Similarity=0.056 Sum_probs=77.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhccCCCCc----hhH------HHHHHHh--------------h-hhhHHHHHHHHH
Q 027181 2 WELICLTLAATAGNNIGKVLQKKGTVILPPLS----FKL------KVIRAYA--------------V-NKAWVIGFLMDI 56 (227)
Q Consensus 2 ~~av~lAl~aA~~~a~g~vlQ~~aa~~~~~~~----~~~------~~~~~ll--------------r-~~~W~~G~~~~~ 56 (227)
+.++...+.+..+.+...+.|++.-++.+..- .+. -...... . ++..|.-..+..
T Consensus 84 ~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 163 (222)
T TIGR00803 84 VVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAVWIVGLLNV 163 (222)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHHHHHHHHHH
Confidence 34555566677778899999999865432110 000 0000000 0 122334444566
Q ss_pred HHHHHHHHHHhhcchhHHHhhhhHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHH
Q 027181 57 FGALLMLRALSQAPVSVIQPVSGCGLAILSIFSHFYLKEVMNAVDWMGITLAGIGTI 113 (227)
Q Consensus 57 ~G~~l~~~AL~~~plsvVQpl~~~~l~~t~~ls~~~l~~rl~~~ew~gv~l~~~Gv~ 113 (227)
+|..+-...+.+.+....-.....+.+++.++|.++++|+++..+|.|+.++..|+.
T Consensus 164 ~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~ 220 (222)
T TIGR00803 164 GGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATF 220 (222)
T ss_pred hcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeE
Confidence 677777777888888889999999999999999999999999999999999887754
No 49
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=93.89 E-value=4.4 Score=36.01 Aligned_cols=108 Identities=19% Similarity=0.177 Sum_probs=67.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhccCCCCch-hHH------HHHHH-------hhhhhH----HHHHHHHHHHHHHHH
Q 027181 2 WELICLTLAATAGNNIGKVLQKKGTVILPPLSF-KLK------VIRAY-------AVNKAW----VIGFLMDIFGALLML 63 (227)
Q Consensus 2 ~~av~lAl~aA~~~a~g~vlQ~~aa~~~~~~~~-~~~------~~~~l-------lr~~~W----~~G~~~~~~G~~l~~ 63 (227)
+.++.+.+++.++.+.+...-|.+..+.|.... -.| .+.-+ .+++.| +.|. +......+.+
T Consensus 11 ~~~~~~~~la~~~~~~~~~~~K~~~~~~~~~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~ 89 (293)
T PRK10532 11 WLPILLLLIAMASIQSGASLAKSLFPLVGAPGVTALRLALGTLILIAIFKPWRLRFAKEQRLPLLFYGV-SLGGMNYLFY 89 (293)
T ss_pred chHHHHHHHHHHHHHhhHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhHHhccCCHHHHHHHHHHHH-HHHHHHHHHH
Confidence 357889999999999999998888766554331 001 00001 112223 3444 3566677788
Q ss_pred HHHhhcchhHHHhhhhHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhc
Q 027181 64 RALSQAPVSVIQPVSGCGLAILSIFSHFYLKEVMNAVDWMGITLAGIGTIGVG 116 (227)
Q Consensus 64 ~AL~~~plsvVQpl~~~~l~~t~~ls~~~l~~rl~~~ew~gv~l~~~Gv~~l~ 116 (227)
.++...|.+..-.+..+.-+++.+++ +||.+ ++.++.+...|+.++.
T Consensus 90 ~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~--~~~~~~i~~~Gv~li~ 136 (293)
T PRK10532 90 LSIQTVPLGIAVALEFTGPLAVALFS----SRRPV--DFVWVVLAVLGLWFLL 136 (293)
T ss_pred HHHhcccHHHHHHHHHHHHHHHHHHh----cCChH--HHHHHHHHHHHHheee
Confidence 89999999987666655555555554 25544 4556666677776654
No 50
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=93.12 E-value=2.5 Score=38.94 Aligned_cols=114 Identities=10% Similarity=0.139 Sum_probs=73.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhccCCC----Cchh-H-------HH---H-HHHhh-----hh----------h--H
Q 027181 2 WELICLTLAATAGNNIGKVLQKKGTVILPP----LSFK-L-------KV---I-RAYAV-----NK----------A--W 48 (227)
Q Consensus 2 ~~av~lAl~aA~~~a~g~vlQ~~aa~~~~~----~~~~-~-------~~---~-~~llr-----~~----------~--W 48 (227)
|.|.+++++|+++.+.-+++.|+-.++... .+.. . .. + ..... .+ . |
T Consensus 193 ~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~ 272 (350)
T PTZ00343 193 WLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTK 272 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccch
Confidence 568999999999999999998887654221 1100 0 00 0 00000 00 0 1
Q ss_pred ---HHHHHHHHHHHHHHHH----HHhhcchhHHHhhhhHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHh
Q 027181 49 ---VIGFLMDIFGALLMLR----ALSQAPVSVIQPVSGCGLAILSIFSHFYLKEVMNAVDWMGITLAGIGTIGV 115 (227)
Q Consensus 49 ---~~G~~~~~~G~~l~~~----AL~~~plsvVQpl~~~~l~~t~~ls~~~l~~rl~~~ew~gv~l~~~Gv~~l 115 (227)
+....+..+.+.++.. .+...+..-..-.....=+++.+++..++||+++..++.|.+++..|+.+.
T Consensus 273 ~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lY 346 (350)
T PTZ00343 273 GIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLY 346 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHH
Confidence 1122334445555443 566666665666666677788999999999999999999999999998764
No 51
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=92.89 E-value=0.48 Score=44.79 Aligned_cols=60 Identities=17% Similarity=0.135 Sum_probs=53.7
Q ss_pred HHHHHHHHhhcchhHHHhhhhHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccC
Q 027181 59 ALLMLRALSQAPVSVIQPVSGCGLAILSIFSHFYLKEVMNAVDWMGITLAGIGTIGVGAG 118 (227)
Q Consensus 59 ~~l~~~AL~~~plsvVQpl~~~~l~~t~~ls~~~l~~rl~~~ew~gv~l~~~Gv~~l~~~ 118 (227)
-.....||++-.++-..-+-..+=.||+.++..+-.||++..+.+++.+.+.|++++.-.
T Consensus 173 nl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~ 232 (416)
T KOG2765|consen 173 NLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMG 232 (416)
T ss_pred HHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEec
Confidence 334457899999999999999999999999999999999999999999999999888633
No 52
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=92.39 E-value=4.4 Score=31.79 Aligned_cols=55 Identities=15% Similarity=0.230 Sum_probs=45.7
Q ss_pred HHHHHHHhhcchhHHHhhhhHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHH
Q 027181 60 LLMLRALSQAPVSVIQPVSGCGLAILSIFSHFYLKEVMNAVDWMGITLAGIGTIG 114 (227)
Q Consensus 60 ~l~~~AL~~~plsvVQpl~~~~l~~t~~ls~~~l~~rl~~~ew~gv~l~~~Gv~~ 114 (227)
..++..+...+..-.+-+...--+++.+++..+++|+++..++.|+.++..|...
T Consensus 96 ~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~ 150 (153)
T PF03151_consen 96 LSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLL 150 (153)
T ss_pred HHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhe
Confidence 3445555666667777788888999999999999999999999999999998754
No 53
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=91.34 E-value=1.6 Score=39.81 Aligned_cols=80 Identities=13% Similarity=0.194 Sum_probs=49.2
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhhcchh--HHH-hhh-hHHHHHHHHHHHHHhccccchhHHHHHHHHHHHH
Q 027181 37 KVIRAYAVNKAWVIGFLMDIFGALLMLRALSQAPVS--VIQ-PVS-GCGLAILSIFSHFYLKEVMNAVDWMGITLAGIGT 112 (227)
Q Consensus 37 ~~~~~llr~~~W~~G~~~~~~G~~l~~~AL~~~pls--vVQ-pl~-~~~l~~t~~ls~~~l~~rl~~~ew~gv~l~~~Gv 112 (227)
+.+.+..|+|+=+....+...=...|..-+-+.|-+ +.+ .++ -++=++..+++..++|||+++-||+++.+..+|+
T Consensus 60 ~~~~~~~~~p~~~~~~~l~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV 139 (293)
T COG2962 60 RELKQLLKQPKTLLMLALTALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGV 139 (293)
T ss_pred HHHHHHHhCcHHHHHHHHHHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHH
Confidence 455667777764444444333333444333333332 111 111 2233467888999999999999999999999998
Q ss_pred HHhc
Q 027181 113 IGVG 116 (227)
Q Consensus 113 ~~l~ 116 (227)
...-
T Consensus 140 ~~~~ 143 (293)
T COG2962 140 LIQT 143 (293)
T ss_pred HHHH
Confidence 6653
No 54
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=88.77 E-value=15 Score=32.74 Aligned_cols=113 Identities=17% Similarity=0.123 Sum_probs=71.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCCCCch-------------------h--HH----HHHHHhhhhhHHHH-HHHHH
Q 027181 3 ELICLTLAATAGNNIGKVLQKKGTVILPPLSF-------------------K--LK----VIRAYAVNKAWVIG-FLMDI 56 (227)
Q Consensus 3 ~av~lAl~aA~~~a~g~vlQ~~aa~~~~~~~~-------------------~--~~----~~~~llr~~~W~~G-~~~~~ 56 (227)
.|+.+.+++-++.+.-.+.|++--++-+.... . .+ ...-..+.|..+.- +....
T Consensus 154 ~G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~ 233 (303)
T PF08449_consen 154 LGIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSL 233 (303)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHH
Confidence 38889999999999999999998865332220 0 00 01111233333322 23344
Q ss_pred HHHHHHHHHHh---hcchhHHHhhhhHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHh
Q 027181 57 FGALLMLRALS---QAPVSVIQPVSGCGLAILSIFSHFYLKEVMNAVDWMGITLAGIGTIGV 115 (227)
Q Consensus 57 ~G~~l~~~AL~---~~plsvVQpl~~~~l~~t~~ls~~~l~~rl~~~ew~gv~l~~~Gv~~l 115 (227)
.++.+|..-.. .-.-.....+....=.++.++|..+++++++..+|.|+.++..|+.+-
T Consensus 234 ~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~ 295 (303)
T PF08449_consen 234 TGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLY 295 (303)
T ss_pred HHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHH
Confidence 44444443322 222233344556667889999999999999999999999999987654
No 55
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=85.35 E-value=0.86 Score=41.60 Aligned_cols=112 Identities=17% Similarity=0.170 Sum_probs=78.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCCCCchhHHHHHHHh---------h--------hhhHH-HHHHHHHHHHHHHHHH
Q 027181 4 LICLTLAATAGNNIGKVLQKKGTVILPPLSFKLKVIRAYA---------V--------NKAWV-IGFLMDIFGALLMLRA 65 (227)
Q Consensus 4 av~lAl~aA~~~a~g~vlQ~~aa~~~~~~~~~~~~~~~ll---------r--------~~~W~-~G~~~~~~G~~l~~~A 65 (227)
++++.-++ ..++...++-++.....|..-.+.+.+.+.+ + .+.|+ .=-.+-..|..+++-|
T Consensus 39 gl~l~~vs-~ff~~~~vv~t~~~e~~p~e~a~~r~l~~mlit~pcliy~~~~v~gp~g~R~~LiLRg~mG~tgvmlmyya 117 (346)
T KOG4510|consen 39 GLLLLTVS-YFFNSCMVVSTKVLENDPMELASFRLLVRMLITYPCLIYYMQPVIGPEGKRKWLILRGFMGFTGVMLMYYA 117 (346)
T ss_pred CceehhhH-HHHhhHHHhhhhhhccChhHhhhhhhhhehhhhheEEEEEeeeeecCCCcEEEEEeehhhhhhHHHHHHHH
Confidence 34455555 6677777777777655553221222222111 1 11233 1122456778889999
Q ss_pred HhhcchhHHHhhhhHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhc
Q 027181 66 LSQAPVSVIQPVSGCGLAILSIFSHFYLKEVMNAVDWMGITLAGIGTIGVG 116 (227)
Q Consensus 66 L~~~plsvVQpl~~~~l~~t~~ls~~~l~~rl~~~ew~gv~l~~~Gv~~l~ 116 (227)
+.+.|++=.--+.-++=+||.+++..++|||.++-|-.|......|++++.
T Consensus 118 ~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIv 168 (346)
T KOG4510|consen 118 LMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIV 168 (346)
T ss_pred HhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEe
Confidence 999999877777788888999999999999999999999999999998886
No 56
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=80.47 E-value=5.1 Score=36.22 Aligned_cols=62 Identities=27% Similarity=0.307 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHHHHHhhcchhHHHhhhhHHHHHHHHHHHHHhccccchhHHH----HHHHHHHHHH
Q 027181 52 FLMDIFGALLMLRALSQAPVSVIQPVSGCGLAILSIFSHFYLKEVMNAVDWM----GITLAGIGTI 113 (227)
Q Consensus 52 ~~~~~~G~~l~~~AL~~~plsvVQpl~~~~l~~t~~ls~~~l~~rl~~~ew~----gv~l~~~Gv~ 113 (227)
-.+..+|-.+.+.+-...=+..-.++.+.+++++.+-+.+++||+=+++|+. |+.++++|.+
T Consensus 202 G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~i 267 (269)
T PF06800_consen 202 GLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAI 267 (269)
T ss_pred HHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhh
Confidence 3356677777888888888999999999999999999999999999999986 4444555543
No 57
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=77.54 E-value=31 Score=32.92 Aligned_cols=116 Identities=11% Similarity=-0.008 Sum_probs=83.8
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhhccCC-CCchhH-----HHH-----------HHHhhhhh------------HHHH
Q 027181 1 MWELICLTLAATAGNNIGKVLQKKGTVILP-PLSFKL-----KVI-----------RAYAVNKA------------WVIG 51 (227)
Q Consensus 1 ~~~av~lAl~aA~~~a~g~vlQ~~aa~~~~-~~~~~~-----~~~-----------~~llr~~~------------W~~G 51 (227)
+.+|-++|+++|+.|++=.++-||-..+.. +.+... +++ .++...++ -..+
T Consensus 245 ~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv~~~ 324 (416)
T KOG2765|consen 245 PLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLVVFNN 324 (416)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEeeeHhh
Confidence 357889999999999999999998876653 333110 111 11112222 1234
Q ss_pred HHHHHHHHHHHHHHHhhcchhHHHhhhhHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhc
Q 027181 52 FLMDIFGALLMLRALSQAPVSVIQPVSGCGLAILSIFSHFYLKEVMNAVDWMGITLAGIGTIGVG 116 (227)
Q Consensus 52 ~~~~~~G~~l~~~AL~~~plsvVQpl~~~~l~~t~~ls~~~l~~rl~~~ew~gv~l~~~Gv~~l~ 116 (227)
++-.++.-.++..|.-+-+..++.--+...++.+.+.-...-+++++....+|...+.+|-+++-
T Consensus 325 ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn 389 (416)
T KOG2765|consen 325 LIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVN 389 (416)
T ss_pred HHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhhee
Confidence 44566667788999888888887777788888888777777789999999999999999987775
No 58
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=75.24 E-value=18 Score=29.16 Aligned_cols=65 Identities=18% Similarity=0.208 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHHHHHHhhcchhHHHhhh-hHHHHHHHHHHHH----HhccccchhHHHHHHHHHHHHHH
Q 027181 50 IGFLMDIFGALLMLRALSQAPVSVIQPVS-GCGLAILSIFSHF----YLKEVMNAVDWMGITLAGIGTIG 114 (227)
Q Consensus 50 ~G~~~~~~G~~l~~~AL~~~plsvVQpl~-~~~l~~t~~ls~~----~l~~rl~~~ew~gv~l~~~Gv~~ 114 (227)
.|-.+-..-..++.........+...-+. ...++.++++-++ .-|++++..+..|+.++++|+.+
T Consensus 69 lGG~lG~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 69 LGGLLGVFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred ccHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 55555555566666666666666665554 5666677777776 57889999999999999999753
No 59
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=74.74 E-value=2.4 Score=38.82 Aligned_cols=64 Identities=14% Similarity=0.053 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHHHhhcchhHHHhhhhHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccC
Q 027181 54 MDIFGALLMLRALSQAPVSVIQPVSGCGLAILSIFSHFYLKEVMNAVDWMGITLAGIGTIGVGAG 118 (227)
Q Consensus 54 ~~~~G~~l~~~AL~~~plsvVQpl~~~~l~~t~~ls~~~l~~rl~~~ew~gv~l~~~Gv~~l~~~ 118 (227)
..+.+...+..-|.+.|++..|-=+..-.+|+.+++..++|++-+..-..++.++++| +.+|.+
T Consensus 111 Vfi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~G-F~lGvd 174 (347)
T KOG1442|consen 111 VFILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILG-FGLGVD 174 (347)
T ss_pred eeeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheeh-heeccc
Confidence 4556667788899999999999999999999999999999999888877666666655 334333
No 60
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=74.54 E-value=7.6 Score=30.29 Aligned_cols=61 Identities=28% Similarity=0.180 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHhhcch--hHHH--hhh-hHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHH
Q 027181 54 MDIFGALLMLRALSQAPV--SVIQ--PVS-GCGLAILSIFSHFYLKEVMNAVDWMGITLAGIGTIG 114 (227)
Q Consensus 54 ~~~~G~~l~~~AL~~~pl--svVQ--pl~-~~~l~~t~~ls~~~l~~rl~~~ew~gv~l~~~Gv~~ 114 (227)
....-+.+|.=|=+.+.. |.-| .+. ++.+.+-.++|.+++||+++...|.+..++..++..
T Consensus 47 IA~fEY~LqvPaNRiG~~v~s~~QLK~mQEVItL~iFv~Fsvfyl~epl~~~~l~a~~~i~gav~f 112 (116)
T COG3169 47 IAFFEYLLQVPANRIGHQVYSAAQLKTMQEVITLAIFVPFSVFYLKEPLRWNYLWAFLLILGAVYF 112 (116)
T ss_pred HHHHHHHHhCccchhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHH
Confidence 345556666655444432 2222 222 667788899999999999999999988887777643
No 61
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=73.95 E-value=0.55 Score=43.30 Aligned_cols=50 Identities=18% Similarity=0.214 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHHhhcchhHHHhhhhHHHHHHHHHHHHHhccccchhHHH
Q 027181 54 MDIFGALLMLRALSQAPVSVIQPVSGCGLAILSIFSHFYLKEVMNAVDWM 103 (227)
Q Consensus 54 ~~~~G~~l~~~AL~~~plsvVQpl~~~~l~~t~~ls~~~l~~rl~~~ew~ 103 (227)
...+|-.+...++.+.|++.+|.+-+..-+|+.+++..+.+|+.++..+.
T Consensus 92 ~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~l 141 (316)
T KOG1441|consen 92 VFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYL 141 (316)
T ss_pred HHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEE
Confidence 56788899999999999999999999999999999999999998886553
No 62
>PRK02237 hypothetical protein; Provisional
Probab=72.10 E-value=30 Score=27.23 Aligned_cols=38 Identities=16% Similarity=0.207 Sum_probs=30.9
Q ss_pred hhHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHh
Q 027181 78 SGCGLAILSIFSHFYLKEVMNAVDWMGITLAGIGTIGV 115 (227)
Q Consensus 78 ~~~~l~~t~~ls~~~l~~rl~~~ew~gv~l~~~Gv~~l 115 (227)
+..=++.++.-...+.|+|+++.||+|..++.+|+.++
T Consensus 66 GGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI 103 (109)
T PRK02237 66 GGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVI 103 (109)
T ss_pred hhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHh
Confidence 44445566677888999999999999999999998665
No 63
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=64.93 E-value=9 Score=33.75 Aligned_cols=57 Identities=21% Similarity=0.246 Sum_probs=53.1
Q ss_pred HHHHHHHhhcchhHHHhhhhHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhc
Q 027181 60 LLMLRALSQAPVSVIQPVSGCGLAILSIFSHFYLKEVMNAVDWMGITLAGIGTIGVG 116 (227)
Q Consensus 60 ~l~~~AL~~~plsvVQpl~~~~l~~t~~ls~~~l~~rl~~~ew~gv~l~~~Gv~~l~ 116 (227)
-+...||...+.+.+..+.+.+-.|..+++..++|+|+...+...+.+.+-|++++.
T Consensus 68 Y~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmia 124 (290)
T KOG4314|consen 68 YLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIA 124 (290)
T ss_pred cHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEE
Confidence 456789999999999999999999999999999999999999999999999988886
No 64
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=63.66 E-value=13 Score=29.08 Aligned_cols=39 Identities=13% Similarity=0.207 Sum_probs=32.2
Q ss_pred hhHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhc
Q 027181 78 SGCGLAILSIFSHFYLKEVMNAVDWMGITLAGIGTIGVG 116 (227)
Q Consensus 78 ~~~~l~~t~~ls~~~l~~rl~~~ew~gv~l~~~Gv~~l~ 116 (227)
+..=++.++.-...+.|+|+++.||+|..+|.+|+.++-
T Consensus 64 GGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~ 102 (107)
T PF02694_consen 64 GGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIIL 102 (107)
T ss_pred hhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheE
Confidence 455566677778889999999999999999999987664
No 65
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=60.84 E-value=11 Score=29.64 Aligned_cols=60 Identities=20% Similarity=0.126 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHhhcc--hhHHHh--hh-hHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHH
Q 027181 54 MDIFGALLMLRALSQAP--VSVIQP--VS-GCGLAILSIFSHFYLKEVMNAVDWMGITLAGIGTI 113 (227)
Q Consensus 54 ~~~~G~~l~~~AL~~~p--lsvVQp--l~-~~~l~~t~~ls~~~l~~rl~~~ew~gv~l~~~Gv~ 113 (227)
....=+.+|+=|-+.|. .|..|. +. ++++.+-.++|.+++||+++.....|-.+++.++.
T Consensus 40 IAffEY~l~VPANRiG~~~~s~~QLKi~QEvitL~vF~~Fsv~~l~E~l~~n~l~af~~i~~av~ 104 (108)
T PF04342_consen 40 IAFFEYCLQVPANRIGYQTFSLAQLKIIQEVITLVVFAPFSVFYLGEPLKWNYLWAFLCILGAVY 104 (108)
T ss_pred HHHHHHHHhCcchhhhccccCHHHHHHHHHHHhhheeHHHHHHHhCCCccHHHHHHHHHHHHhhh
Confidence 45555666666654443 334443 22 66777778899999999999999998888776654
No 66
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=58.27 E-value=1.3e+02 Score=26.39 Aligned_cols=29 Identities=17% Similarity=-0.123 Sum_probs=24.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 027181 2 WELICLTLAATAGNNIGKVLQKKGTVILP 30 (227)
Q Consensus 2 ~~av~lAl~aA~~~a~g~vlQ~~aa~~~~ 30 (227)
.+|+++.++++++.+.+.|..++--++.+
T Consensus 113 ~~G~~~vl~~~~~S~~agVy~E~~lK~~~ 141 (244)
T PF04142_consen 113 LLGLLAVLAAAFLSGFAGVYFEKLLKRSN 141 (244)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 46888899999999999999999887743
No 67
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=54.67 E-value=16 Score=28.71 Aligned_cols=40 Identities=15% Similarity=0.145 Sum_probs=31.2
Q ss_pred hhhHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhc
Q 027181 77 VSGCGLAILSIFSHFYLKEVMNAVDWMGITLAGIGTIGVG 116 (227)
Q Consensus 77 l~~~~l~~t~~ls~~~l~~rl~~~ew~gv~l~~~Gv~~l~ 116 (227)
-+..=+..++.-...+.|.++++.||.|..+|.+|+.++.
T Consensus 64 YGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil 103 (109)
T COG1742 64 YGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVIL 103 (109)
T ss_pred hcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeE
Confidence 3455556667777888899999999999999988875553
No 68
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=54.29 E-value=18 Score=32.73 Aligned_cols=34 Identities=12% Similarity=0.224 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHhccccchhHHHHHHHHHHHHHH
Q 027181 81 GLAILSIFSHFYLKEVMNAVDWMGITLAGIGTIG 114 (227)
Q Consensus 81 ~l~~t~~ls~~~l~~rl~~~ew~gv~l~~~Gv~~ 114 (227)
-=.||.+.|..+++.+++.++|.|..++..++..
T Consensus 277 RKfFTil~SVllf~npls~rQwlgtvlVF~aL~~ 310 (337)
T KOG1580|consen 277 RKFFTILISVLLFNNPLSGRQWLGTVLVFSALTA 310 (337)
T ss_pred HHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhh
Confidence 3469999999999999999999999998877644
No 69
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=49.25 E-value=3.7 Score=37.39 Aligned_cols=62 Identities=16% Similarity=0.312 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHhhcchhHHHhhhhHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhc
Q 027181 55 DIFGALLMLRALSQAPVSVIQPVSGCGLAILSIFSHFYLKEVMNAVDWMGITLAGIGTIGVG 116 (227)
Q Consensus 55 ~~~G~~l~~~AL~~~plsvVQpl~~~~l~~t~~ls~~~l~~rl~~~ew~gv~l~~~Gv~~l~ 116 (227)
|+-+-.+-..|.-+-++.-+|-+=+-+.+.-.+++.+++|.|-+..+..|++.|.+|++++.
T Consensus 88 DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV 149 (336)
T KOG2766|consen 88 DVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVV 149 (336)
T ss_pred eecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEE
Confidence 44443344556677778888889999999999999999999999999999999999998775
No 70
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=44.11 E-value=94 Score=28.74 Aligned_cols=69 Identities=14% Similarity=0.064 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcchhHHHh-hhhHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhc
Q 027181 48 WVIGFLMDIFGALLMLRALSQAPVSVIQP-VSGCGLAILSIFSHFYLKEVMNAVDWMGITLAGIGTIGVG 116 (227)
Q Consensus 48 W~~G~~~~~~G~~l~~~AL~~~plsvVQp-l~~~~l~~t~~ls~~~l~~rl~~~ew~gv~l~~~Gv~~l~ 116 (227)
|-.=..+...-.+++..|+.+-=..=+.. ..+.+++-+..++...+|+|-+.++...+.++.+|+++--
T Consensus 67 Y~i~V~mFF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcT 136 (330)
T KOG1583|consen 67 YAITVAMFFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICT 136 (330)
T ss_pred hheehheeeeeeeeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEE
Confidence 66666666777788888887743333333 4699999999999999999999999999999999987764
No 71
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=41.00 E-value=97 Score=28.14 Aligned_cols=75 Identities=20% Similarity=0.205 Sum_probs=46.2
Q ss_pred hhhhHHHHHHHHHHHHHHH----HHHHhhcchhHHHhhhhHHHHHH-HHHHHHHhcc--ccchhHHH----HHHHHHHHH
Q 027181 44 VNKAWVIGFLMDIFGALLM----LRALSQAPVSVIQPVSGCGLAIL-SIFSHFYLKE--VMNAVDWM----GITLAGIGT 112 (227)
Q Consensus 44 r~~~W~~G~~~~~~G~~l~----~~AL~~~plsvVQpl~~~~l~~t-~~ls~~~l~~--rl~~~ew~----gv~l~~~Gv 112 (227)
++|.-|.=+.+.......| ..||..-+-++|-|+.-...... .+-+..++|| +++..++. |...++.|+
T Consensus 208 ~~~~~y~l~~~~v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~ii~GV 287 (300)
T PF05653_consen 208 TYPLTYLLLLVLVVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLIIIIGV 287 (300)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHhh
Confidence 4444443344444555555 45888999999999975555444 4455556775 55565555 445577777
Q ss_pred HHhccC
Q 027181 113 IGVGAG 118 (227)
Q Consensus 113 ~~l~~~ 118 (227)
.++...
T Consensus 288 ~lL~~~ 293 (300)
T PF05653_consen 288 FLLSSS 293 (300)
T ss_pred heeecc
Confidence 777543
No 72
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=38.23 E-value=1.4e+02 Score=24.79 Aligned_cols=39 Identities=23% Similarity=0.200 Sum_probs=24.5
Q ss_pred hhhHHHHHHHHHHHHHhc----cccchhHHHHHHHHHHHHHHh
Q 027181 77 VSGCGLAILSIFSHFYLK----EVMNAVDWMGITLAGIGTIGV 115 (227)
Q Consensus 77 l~~~~l~~t~~ls~~~l~----~rl~~~ew~gv~l~~~Gv~~l 115 (227)
+.+..++..+++-++=.. ++++..++.|++++..|+.+.
T Consensus 102 ~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~ 144 (150)
T COG3238 102 VIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLA 144 (150)
T ss_pred HHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHh
Confidence 344555555666555544 677777788887777774433
No 73
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=37.49 E-value=3.1e+02 Score=25.57 Aligned_cols=63 Identities=10% Similarity=0.185 Sum_probs=54.4
Q ss_pred HHHHHHHHHHHHHHhhcchhHHHhhh-hHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhc
Q 027181 53 LMDIFGALLMLRALSQAPVSVIQPVS-GCGLAILSIFSHFYLKEVMNAVDWMGITLAGIGTIGVG 116 (227)
Q Consensus 53 ~~~~~G~~l~~~AL~~~plsvVQpl~-~~~l~~t~~ls~~~l~~rl~~~ew~gv~l~~~Gv~~l~ 116 (227)
..+.++.-+|+-||.+.+- -.|.+. ++-++-..++...+.|+|.+.+|..-..++.+|+.++.
T Consensus 91 ~tn~~s~~~~yeaLKyvSy-Ptq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~ 154 (327)
T KOG1581|consen 91 FTNTLSSWCGYEALKYVSY-PTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFS 154 (327)
T ss_pred HHhhcchHHHHHHHHhccc-hHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEE
Confidence 3688999999999999875 355554 77788889999999999999999999999999987775
No 74
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=35.16 E-value=2.8e+02 Score=23.59 Aligned_cols=85 Identities=15% Similarity=0.162 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHHHHHHHhhhccCCCCc-h-h----HHHH----H-HHh--h--h--hhHH----HHHHHHHHHHHHHHHH
Q 027181 7 LTLAATAGNNIGKVLQKKGTVILPPLS-F-K----LKVI----R-AYA--V--N--KAWV----IGFLMDIFGALLMLRA 65 (227)
Q Consensus 7 lAl~aA~~~a~g~vlQ~~aa~~~~~~~-~-~----~~~~----~-~ll--r--~--~~W~----~G~~~~~~G~~l~~~A 65 (227)
.++++++|++...+.+||..++.+... . . +-.. . ... . + +.|. .|. ...+++.++..+
T Consensus 150 ~~l~aa~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~-~t~i~~~l~~~a 228 (256)
T TIGR00688 150 EALVLAFSFTAYGLIRKALKNTDLAGFCLETLSLMPVAIYYLLQTDFATVQQTNPFPIWLLLVLAGL-ITGTPLLAFVIA 228 (256)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHHHHHHhccCcccccCchhHHHHHHHHHH-HHHHHHHHHHHH
Confidence 568899999999999988654321111 0 0 0000 0 000 0 0 1233 232 467899999999
Q ss_pred HhhcchhHHHhhhhHHHHHHHHHHHHH
Q 027181 66 LSQAPVSVIQPVSGCGLAILSIFSHFY 92 (227)
Q Consensus 66 L~~~plsvVQpl~~~~l~~t~~ls~~~ 92 (227)
++..|.+.+.+..-.+=+++..++.++
T Consensus 229 ~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 229 ANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred HHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999998888764
No 75
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=34.64 E-value=2.5e+02 Score=25.82 Aligned_cols=59 Identities=10% Similarity=0.114 Sum_probs=29.9
Q ss_pred HHHHHHHHHHhhcchhHHHhhhhHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHh
Q 027181 57 FGALLMLRALSQAPVSVIQPVSGCGLAILSIFSHFYLKEVMNAVDWMGITLAGIGTIGV 115 (227)
Q Consensus 57 ~G~~l~~~AL~~~plsvVQpl~~~~l~~t~~ls~~~l~~rl~~~ew~gv~l~~~Gv~~l 115 (227)
+--.+...|-...|+|.+--+.=.+=..-..++.++.||+++..|+..-+.+-.++++.
T Consensus 223 vpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~ 281 (293)
T COG2962 223 VPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALF 281 (293)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence 33444455555555555544444444444555555555555555555555544444444
No 76
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=30.25 E-value=4.3e+02 Score=24.18 Aligned_cols=40 Identities=18% Similarity=0.246 Sum_probs=26.4
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHh
Q 027181 37 KVIRAYAVNKAWVIGFLMDIFGALLMLRALSQAPVSVIQP 76 (227)
Q Consensus 37 ~~~~~llr~~~W~~G~~~~~~G~~l~~~AL~~~plsvVQp 76 (227)
+..+..+|||..+.........+.....-..+.|..+.+-
T Consensus 209 ~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~ 248 (413)
T PRK15403 209 RDFRNVFRNRLFLTGAATLSLSYIPMMSWVAVSPVILIDA 248 (413)
T ss_pred HHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhChHHHHHh
Confidence 4556778899988777766666655555555667665544
No 77
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=24.74 E-value=53 Score=30.34 Aligned_cols=34 Identities=24% Similarity=0.482 Sum_probs=31.0
Q ss_pred HHHHHHHHHHhccccchhHHHHHHHHHHHHHHhc
Q 027181 83 AILSIFSHFYLKEVMNAVDWMGITLAGIGTIGVG 116 (227)
Q Consensus 83 ~~t~~ls~~~l~~rl~~~ew~gv~l~~~Gv~~l~ 116 (227)
-+++++|..+++.+++...|+|..++..|..+..
T Consensus 280 FvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa 313 (330)
T KOG1583|consen 280 FVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFA 313 (330)
T ss_pred HHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 3678889999999999999999999999998886
No 78
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=24.25 E-value=24 Score=32.83 Aligned_cols=69 Identities=12% Similarity=0.078 Sum_probs=50.9
Q ss_pred HHHHHHH-HHHHHHHHHHHHhhcchhHHHhhhhHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhc
Q 027181 48 WVIGFLM-DIFGALLMLRALSQAPVSVIQPVSGCGLAILSIFSHFYLKEVMNAVDWMGITLAGIGTIGVG 116 (227)
Q Consensus 48 W~~G~~~-~~~G~~l~~~AL~~~plsvVQpl~~~~l~~t~~ls~~~l~~rl~~~ew~gv~l~~~Gv~~l~ 116 (227)
|.+.+++ ...=..+...++.+.|+|+..+.-.++++|-++++..+-=|+.+..-..=+.++..|+++..
T Consensus 86 ~~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft 155 (349)
T KOG1443|consen 86 RLAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFT 155 (349)
T ss_pred HhhhhhhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEE
Confidence 5555553 33345688999999999999999999999999999988767766554444455666665553
No 79
>COG3114 CcmD Heme exporter protein D [Intracellular trafficking and secretion]
Probab=22.67 E-value=1.3e+02 Score=21.64 Aligned_cols=28 Identities=25% Similarity=0.364 Sum_probs=24.8
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 027181 1 MWELICLTLAATAGNNIGKVLQKKGTVI 28 (227)
Q Consensus 1 ~~~av~lAl~aA~~~a~g~vlQ~~aa~~ 28 (227)
+|+++..++++-..+-+=++.|||.-.+
T Consensus 19 VWlA~~~tll~l~~l~v~sv~qrr~iL~ 46 (67)
T COG3114 19 VWLAVGMTLLPLAVLVVHSVLQRRAILR 46 (67)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4999999999999999999999998644
No 80
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=21.78 E-value=36 Score=30.85 Aligned_cols=69 Identities=28% Similarity=0.421 Sum_probs=52.7
Q ss_pred HHHHHH---HHHHHHHHHHHHHhhcchhHHHhhh-hHHHHHHHHHHHHHhccccchhHHH-HH---HHHHHHHHHhc
Q 027181 48 WVIGFL---MDIFGALLMLRALSQAPVSVIQPVS-GCGLAILSIFSHFYLKEVMNAVDWM-GI---TLAGIGTIGVG 116 (227)
Q Consensus 48 W~~G~~---~~~~G~~l~~~AL~~~plsvVQpl~-~~~l~~t~~ls~~~l~~rl~~~ew~-gv---~l~~~Gv~~l~ 116 (227)
|..|+. .-.+|...|+-|..+.-+|.-.|+. ...|+-+.+++.+.+||--+..+.+ |. +++++|+.+-+
T Consensus 59 ~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs 135 (288)
T COG4975 59 FIVGFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTS 135 (288)
T ss_pred HHHHHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEee
Confidence 555555 4567888999999999999999996 8899999999999999977765543 44 44555554444
Done!