BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027183
(227 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O49814|BCH2_CAPAN Beta-carotene hydroxylase 2, chloroplastic (Fragment) OS=Capsicum
annuum GN=CA2 PE=2 SV=1
Length = 316
Score = 296 bits (759), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 144/173 (83%), Positives = 155/173 (89%), Gaps = 1/173 (0%)
Query: 51 RKLNSFTVCFVLEEKKQSTQIETFTEEEEEESGTQISTAARVAEKLARKRSERFTYLVAA 110
R+ SFTVCFVLE+ K TQ E E+ E + QIS A R+AEKLARK+SERFTYLVAA
Sbjct: 59 RRRPSFTVCFVLEDDKFKTQFEAGEEDIEMKIEEQIS-ATRLAEKLARKKSERFTYLVAA 117
Query: 111 VMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWH 170
VMSSFGITSMAVMAVYYRF+WQMEGGEVP +EMFGTFALSVGAAVGMEFWARWAHKALWH
Sbjct: 118 VMSSFGITSMAVMAVYYRFYWQMEGGEVPFSEMFGTFALSVGAAVGMEFWARWAHKALWH 177
Query: 171 ASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGA 223
ASLWHMHESHH+PREGPFELNDVFAIINAVPAIALL +GFFHKGL+PGLCFGA
Sbjct: 178 ASLWHMHESHHKPREGPFELNDVFAIINAVPAIALLDYGFFHKGLIPGLCFGA 230
>sp|B3SGL0|BCH_GENLU Beta-carotene 3-hydroxylase, chloroplastic OS=Gentiana lutea GN=BHY
PE=2 SV=1
Length = 320
Score = 278 bits (712), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 132/180 (73%), Positives = 157/180 (87%), Gaps = 7/180 (3%)
Query: 51 RKLNSFTVCFVLEEKKQSTQIETFTEEEE------EESGTQISTAA-RVAEKLARKRSER 103
R TVCFVLEEK+ ++ +++++ ++ +IS +A ++A+KLARK+SER
Sbjct: 56 RSKPRLTVCFVLEEKELRGKLVVASDDDDGAGEVRKQREKEISASAEKLAQKLARKKSER 115
Query: 104 FTYLVAAVMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARW 163
FTYLVAAVMSSFGITSMAV++VYYRF WQMEGGE+PL+EMFGTFALSVGAAVGMEFWARW
Sbjct: 116 FTYLVAAVMSSFGITSMAVLSVYYRFSWQMEGGEIPLSEMFGTFALSVGAAVGMEFWARW 175
Query: 164 AHKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGA 223
AH+ALWHASLWHMHESHH+PREGPFELND+FAIINAVPAIALLS+GFFHKGL+PGLCFGA
Sbjct: 176 AHEALWHASLWHMHESHHKPREGPFELNDIFAIINAVPAIALLSYGFFHKGLIPGLCFGA 235
>sp|Q9LTG0|BCH2_ARATH Beta-carotene 3-hydroxylase 2, chloroplastic OS=Arabidopsis
thaliana GN=BETA-OHASE 2 PE=2 SV=1
Length = 303
Score = 271 bits (693), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 127/179 (70%), Positives = 150/179 (83%), Gaps = 2/179 (1%)
Query: 45 FNGKNRRKLNSFTVCFVLEEKKQSTQIETFTEEEEEESGTQISTAARVAEKLARKRSERF 104
FNG RRK+ TVCFV+EE+KQS+ ++ + E S ++I +R+ +K +K+SERF
Sbjct: 37 FNGFRRRKI--LTVCFVVEERKQSSPMDDDNKPESTTSSSEILMTSRLLKKAEKKKSERF 94
Query: 105 TYLVAAVMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWA 164
TYL+AAVMSSFGITSMA+MAVYYRF WQM+GGEV + EMFGTFALSVGAAVGMEFWARWA
Sbjct: 95 TYLIAAVMSSFGITSMAIMAVYYRFSWQMKGGEVSVLEMFGTFALSVGAAVGMEFWARWA 154
Query: 165 HKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGA 223
H+ALWH SLW+MHESHH+PREG FELNDVFAI NAVPAI LL +GF +KGLVPGLCFGA
Sbjct: 155 HRALWHDSLWNMHESHHKPREGAFELNDVFAITNAVPAIGLLYYGFLNKGLVPGLCFGA 213
>sp|Q9SZZ8|BCH1_ARATH Beta-carotene 3-hydroxylase 1, chloroplastic OS=Arabidopsis
thaliana GN=BETA-OHASE 1 PE=1 SV=1
Length = 310
Score = 268 bits (686), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 147/175 (84%), Gaps = 3/175 (1%)
Query: 52 KLNSFTVCFVLEEKKQSTQIETFTEEEEEESGTQIST---AARVAEKLARKRSERFTYLV 108
+ F+VC+V+EE++Q++ IE E S I A R+AEKL RK+SER TYL+
Sbjct: 41 RFKRFSVCYVVEERRQNSPIENDERPESTSSTNAIDAEYLALRLAEKLERKKSERSTYLI 100
Query: 109 AAVMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKAL 168
AA++SSFGITSMAVMAVYYRF WQMEGGE+ + EMFGTFALSVGAAVGMEFWARWAH+AL
Sbjct: 101 AAMLSSFGITSMAVMAVYYRFSWQMEGGEISMLEMFGTFALSVGAAVGMEFWARWAHRAL 160
Query: 169 WHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGA 223
WHASLW+MHESHH+PREGPFELNDVFAI+NA PAI LLS+GFF+KGLVPGLCFGA
Sbjct: 161 WHASLWNMHESHHKPREGPFELNDVFAIVNAGPAIGLLSYGFFNKGLVPGLCFGA 215
>sp|O49815|BCH1_CAPAN Beta-carotene hydroxylase 1, chloroplastic OS=Capsicum annuum
GN=CA1 PE=1 SV=1
Length = 315
Score = 266 bits (679), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 131/208 (62%), Positives = 155/208 (74%), Gaps = 9/208 (4%)
Query: 23 PSSLLTTKPAPLFAPLGTHRGFFNGKNRRKLNSFTVCFVLEEKK-------QSTQIETFT 75
P T P F+PL + ++RRK CFVL++ K + + E
Sbjct: 24 PKYFATAPPLLFFSPLTCNLDAIL-RSRRK-PRLAACFVLKDDKLYTAQSGKQSDTEAIG 81
Query: 76 EEEEEESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITSMAVMAVYYRFWWQMEG 135
+E E E+ + S A R+AEK ARK+SERFTYLVAAVMSS GITSMAV++VYYRF WQMEG
Sbjct: 82 DEIEVETNEEKSLAVRLAEKFARKKSERFTYLVAAVMSSLGITSMAVISVYYRFSWQMEG 141
Query: 136 GEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESHHRPREGPFELNDVFA 195
GE+P +EMF TFAL+ GAA+GME+WARWAH+ALWHASLWHMHESHHRPREGPFELND+FA
Sbjct: 142 GEMPFSEMFCTFALAFGAAIGMEYWARWAHRALWHASLWHMHESHHRPREGPFELNDIFA 201
Query: 196 IINAVPAIALLSFGFFHKGLVPGLCFGA 223
IINAVPAIA SFGF HKGL+PG+CFGA
Sbjct: 202 IINAVPAIAFFSFGFNHKGLIPGICFGA 229
>sp|Q9SPK6|BCH_HAEPL Beta-carotene 3-hydroxylase, chloroplastic (Fragment)
OS=Haematococcus pluvialis GN=CRTZ PE=2 SV=1
Length = 322
Score = 126 bits (317), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/124 (50%), Positives = 84/124 (67%), Gaps = 3/124 (2%)
Query: 103 RFTYLVAAVMSSFGITSMAVMAVYYRFWWQME-GGEVPLAEMFGTFALSVGAAVGMEFWA 161
+ +Y AA+ +S G++ +A+ A Y RF M GG VP E+ GT L VG A+GME +A
Sbjct: 114 QLSYQAAAIAASIGVSGIAIFATYLRFAMHMTVGGAVPWGEVAGTLLLVVGGALGMEMYA 173
Query: 162 RWAHKALWHASL--WHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGL 219
R+AHKA+WH S W +H+SHH PR GPFE ND+FAIIN +PA+ L +FGF+ ++
Sbjct: 174 RYAHKAIWHESPLGWLLHKSHHTPRTGPFEANDLFAIINGLPAMLLCTFGFWLPNVLGAA 233
Query: 220 CFGA 223
CFGA
Sbjct: 234 CFGA 237
>sp|Q01332|CRTZ_ESCVU Beta-carotene hydroxylase OS=Escherichia vulneris GN=crtZ PE=3 SV=1
Length = 176
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 153 AAVGMEFWARWAHKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSFG 209
+ + ME A + H+ + H W HESHH PR+G FELND+FA++ A AIAL++ G
Sbjct: 11 SVIAMEGIAAFTHRYIMHGWGWRWHESHHTPRKGVFELNDLFAVVFAGVAIALIAVG 67
>sp|P21688|CRTZ_PANAN Beta-carotene hydroxylase OS=Pantoea ananas GN=crtZ PE=3 SV=1
Length = 175
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 35/55 (63%)
Query: 155 VGMEFWARWAHKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSFG 209
+GME A AHK + H W H SHH PR+G FE+ND++A++ A +I L+ G
Sbjct: 15 IGMEVIAALAHKYIMHGWGWGWHLSHHEPRKGAFEVNDLYAVVFAALSILLIYLG 69
>sp|P54973|CRTZ_PARSN Beta-carotene hydroxylase OS=Paracoccus sp. (strain N81106 / MBIC
01143) GN=crtZ PE=3 SV=1
Length = 162
Score = 37.0 bits (84), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 146 TFALSVGAAVGMEFWARWAHKALWHASL-WHMHESHHRPREGPFELNDVFAIINAVPAIA 204
F + V + ME A H+ + H L W H+SHH + E ND++ ++ AV A
Sbjct: 3 NFLIVVATVLVMELTAYSVHRWIMHGPLGWGWHKSHHEEHDHALEKNDLYGLVFAVIATV 62
Query: 205 LLSFGFF 211
L + G+
Sbjct: 63 LFTVGWI 69
>sp|Q44262|CRTZ_PARS1 Beta-carotene hydroxylase OS=Paracoccus sp. (strain PC1) GN=crtZ
PE=3 SV=1
Length = 162
Score = 36.2 bits (82), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 147 FALSVGAAVGMEFWARWAHKALWHASL-WHMHESHHRPREGPFELNDVFAIINAVPAIAL 205
F + V + ME A H+ + H L W H+SHH + E ND++ ++ AV A L
Sbjct: 4 FLIVVATVLVMELTAYSVHRWIMHGPLGWGWHKSHHEEHDHALEKNDLYGVVFAVLATIL 63
Query: 206 LSFGFF 211
+ G +
Sbjct: 64 FTVGAY 69
>sp|Q5RBN1|FND3A_PONAB Fibronectin type-III domain-containing protein 3A OS=Pongo abelii
GN=FNDC3A PE=2 SV=1
Length = 1142
Score = 32.0 bits (71), Expect = 3.3, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 39/87 (44%)
Query: 29 TKPAPLFAPLGTHRGFFNGKNRRKLNSFTVCFVLEEKKQSTQIETFTEEEEEESGTQIST 88
+ P +P+ H G G+N +N+ + + K TQ++T EE++EE+ +
Sbjct: 150 SSPQKCPSPINEHNGLIKGQNAGGINTGSAKIKSGKGKGGTQVDTEIEEKDEETKAFEAL 209
Query: 89 AARVAEKLARKRSERFTYLVAAVMSSF 115
+ + + +A R L + SS
Sbjct: 210 LSNIVKPVASDIQARTVVLTWSPPSSL 236
>sp|Q8BXN9|TM87A_MOUSE Transmembrane protein 87A OS=Mus musculus GN=Tmem87a PE=1 SV=1
Length = 555
Score = 31.6 bits (70), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 9/88 (10%)
Query: 1 MAVGLLAAIVPKPFCLLTTKLQPSSLLTTKPAPLFA--------PLGTHRGFFN-GKNRR 51
MAV + P F LL + P S L PAP+FA P+ + +G+FN GK
Sbjct: 1 MAVAAWLQVSPVIFLLLGAQPFPLSFLGAGPAPVFAADRSKWHIPMPSGKGYFNFGKILF 60
Query: 52 KLNSFTVCFVLEEKKQSTQIETFTEEEE 79
+ + + F E QS I F + +
Sbjct: 61 RNTTILLKFDGEPCDQSLNITWFLKSAD 88
>sp|Q2V3R1|FB346_ARATH F-box protein At3g44326 OS=Arabidopsis thaliana GN=At3g44326 PE=2
SV=1
Length = 363
Score = 31.6 bits (70), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 58/147 (39%), Gaps = 26/147 (17%)
Query: 37 PLGTHRGFFNGKNRRKLNSFTVCFVLEEKKQSTQIE--------TFTEEEEEESGTQIST 88
P+ HR + G+ K +S FV+ KK+S Q+E F EEE + QI
Sbjct: 205 PVSVHRHWLTGEVHVKFSSI---FVVGNKKRSEQVEFTVTVVLAVFNRREEETAVMQIRE 261
Query: 89 AARVAE-KLARKRSERFTYLVAAVMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTF 147
+ VAE K R + + + +A M + RF GGE E + +
Sbjct: 262 VSLVAEDKDGRNLGGKVSLEIL----------VAAMGMKRRF---RAGGEEEGKEKYIEY 308
Query: 148 ALSVGAAVGMEFWARWAHKALWHASLW 174
A M+ W R A+ A+ W
Sbjct: 309 MERKTAKAEMK-WRRGKETAMETAACW 334
>sp|Q6P7L4|SC22B_XENTR Vesicle-trafficking protein SEC22b OS=Xenopus tropicalis GN=sec22b
PE=2 SV=1
Length = 215
Score = 30.4 bits (67), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 42/97 (43%), Gaps = 9/97 (9%)
Query: 40 THRGFFNGKNRRKLNSFTVCFVLEEKKQSTQIETFTEEEE-----EESGTQISTAARVAE 94
T + + + + RR L+S ++ IE E + + +ST ++
Sbjct: 122 TKKSYIDSRARRNLSSVNTELQDVQRIMVANIEEVLLRGEALSALDSKASNLSTLSKKYR 181
Query: 95 KLARKRSERFTYLVAAVMSSFGITSMAVMAVYYRFWW 131
+ A+ + R TY A ++ F + ++ VY RFWW
Sbjct: 182 QDAKYLNMRSTYAKLAAVAVFSV----MLIVYIRFWW 214
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.134 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,652,791
Number of Sequences: 539616
Number of extensions: 3181119
Number of successful extensions: 14186
Number of sequences better than 100.0: 24
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 14167
Number of HSP's gapped (non-prelim): 25
length of query: 227
length of database: 191,569,459
effective HSP length: 113
effective length of query: 114
effective length of database: 130,592,851
effective search space: 14887585014
effective search space used: 14887585014
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 59 (27.3 bits)