Query 027185
Match_columns 227
No_of_seqs 265 out of 1784
Neff 7.9
Searched_HMMs 46136
Date Fri Mar 29 06:13:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027185.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/027185hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0372 Serine/threonine speci 100.0 5.9E-76 1.3E-80 482.1 10.1 227 1-227 76-303 (303)
2 KOG0373 Serine/threonine speci 100.0 3.6E-68 7.9E-73 430.5 11.6 227 1-227 79-306 (306)
3 PTZ00239 serine/threonine prot 100.0 2.5E-65 5.4E-70 443.9 22.4 227 1-227 76-303 (303)
4 cd07415 MPP_PP2A_PP4_PP6 PP2A, 100.0 1.9E-64 4E-69 435.8 20.1 211 1-211 75-285 (285)
5 PTZ00480 serine/threonine-prot 100.0 7.3E-64 1.6E-68 436.3 20.5 213 1-214 92-305 (320)
6 KOG0374 Serine/threonine speci 100.0 1.7E-64 3.6E-69 441.7 16.3 210 1-210 93-303 (331)
7 cd07420 MPP_RdgC Drosophila me 100.0 2.3E-63 4.9E-68 433.7 19.9 207 1-208 85-321 (321)
8 cd07417 MPP_PP5_C PP5, C-termi 100.0 1.2E-62 2.7E-67 429.5 19.5 215 1-216 94-310 (316)
9 PTZ00244 serine/threonine-prot 100.0 2.1E-62 4.5E-67 424.2 19.5 208 1-209 85-293 (294)
10 cd07414 MPP_PP1_PPKL PP1, PPKL 100.0 3.4E-62 7.3E-67 423.2 18.3 209 1-210 83-292 (293)
11 smart00156 PP2Ac Protein phosp 100.0 2.1E-61 4.5E-66 414.9 20.2 209 1-210 61-270 (271)
12 cd07416 MPP_PP2B PP2B, metallo 100.0 3.4E-61 7.4E-66 419.3 20.6 213 1-215 76-302 (305)
13 KOG0371 Serine/threonine prote 100.0 4.9E-62 1.1E-66 402.4 9.0 227 1-227 93-319 (319)
14 cd07419 MPP_Bsu1_C Arabidopsis 100.0 1.7E-58 3.6E-63 403.8 19.9 209 1-209 89-311 (311)
15 cd07418 MPP_PP7 PP7, metalloph 100.0 2.5E-58 5.3E-63 407.9 20.3 213 1-213 100-370 (377)
16 KOG0375 Serine-threonine phosp 100.0 2.9E-58 6.2E-63 394.9 6.3 214 1-216 121-348 (517)
17 KOG0377 Protein serine/threoni 100.0 1.4E-48 3.1E-53 342.1 10.0 211 2-213 200-435 (631)
18 KOG0376 Serine-threonine phosp 100.0 9.2E-46 2E-50 329.5 10.0 216 2-218 249-466 (476)
19 cd00144 MPP_PPP_family phospho 100.0 2E-30 4.4E-35 216.3 17.5 184 1-195 31-224 (225)
20 cd07425 MPP_Shelphs Shewanella 99.8 4E-20 8.7E-25 153.4 9.3 146 1-180 39-196 (208)
21 PRK13625 bis(5'-nucleosyl)-tet 99.8 4.1E-19 8.9E-24 150.9 13.7 90 1-92 43-146 (245)
22 cd07421 MPP_Rhilphs Rhilph pho 99.8 2.7E-18 5.9E-23 147.6 12.5 157 1-185 41-283 (304)
23 PHA02239 putative protein phos 99.8 2.2E-18 4.8E-23 145.4 8.8 105 1-121 36-184 (235)
24 cd07413 MPP_PA3087 Pseudomonas 99.7 6E-18 1.3E-22 141.8 8.7 86 1-89 40-143 (222)
25 cd07423 MPP_PrpE Bacillus subt 99.7 1.1E-17 2.3E-22 141.2 7.6 88 1-91 44-142 (234)
26 PRK00166 apaH diadenosine tetr 99.7 1.7E-16 3.7E-21 136.7 11.4 88 1-92 35-127 (275)
27 cd07424 MPP_PrpA_PrpB PrpA and 99.7 6.4E-17 1.4E-21 134.0 8.1 110 1-122 35-157 (207)
28 PRK11439 pphA serine/threonine 99.7 6.3E-17 1.4E-21 135.2 8.0 83 1-89 51-146 (218)
29 cd07422 MPP_ApaH Escherichia c 99.7 1.4E-16 3.1E-21 135.9 7.7 88 1-92 33-125 (257)
30 TIGR00668 apaH bis(5'-nucleosy 99.6 9.8E-16 2.1E-20 131.4 8.0 91 1-97 35-131 (279)
31 PRK09968 serine/threonine-spec 99.6 6.1E-15 1.3E-19 123.2 7.2 83 1-89 49-144 (218)
32 COG0639 ApaH Diadenosine tetra 99.2 2.4E-11 5.1E-16 93.4 6.0 143 41-184 3-154 (155)
33 PF00149 Metallophos: Calcineu 98.5 3E-07 6.6E-12 70.4 7.1 127 1-162 38-199 (200)
34 cd07379 MPP_239FB Homo sapiens 97.8 0.00011 2.3E-09 56.5 8.4 30 138-167 91-120 (135)
35 cd00841 MPP_YfcE Escherichia c 97.8 0.0004 8.8E-09 54.2 10.8 53 1-89 31-86 (155)
36 cd07399 MPP_YvnB Bacillus subt 97.8 0.0022 4.7E-08 53.3 15.5 70 139-209 136-213 (214)
37 cd07397 MPP_DevT Myxococcus xa 97.7 0.00037 8E-09 59.0 9.4 128 1-163 32-208 (238)
38 cd00838 MPP_superfamily metall 97.6 0.00054 1.2E-08 50.5 8.7 87 1-167 33-119 (131)
39 PF12850 Metallophos_2: Calcin 97.5 0.00089 1.9E-08 51.8 8.8 121 1-197 32-152 (156)
40 TIGR00040 yfcE phosphoesterase 97.5 0.0036 7.8E-08 49.2 12.1 30 1-39 35-64 (158)
41 PRK05340 UDP-2,3-diacylglucosa 97.3 0.0024 5.2E-08 53.9 10.5 66 138-208 174-239 (241)
42 cd07400 MPP_YydB Bacillus subt 97.3 0.0027 5.9E-08 48.8 9.9 30 139-168 101-130 (144)
43 cd07394 MPP_Vps29 Homo sapiens 97.2 0.019 4E-07 46.4 14.1 30 1-39 36-65 (178)
44 cd07404 MPP_MS158 Microscilla 97.1 0.0021 4.7E-08 50.8 7.2 38 140-181 126-163 (166)
45 TIGR01854 lipid_A_lpxH UDP-2,3 97.1 0.0016 3.4E-08 54.7 6.6 59 138-200 172-230 (231)
46 cd07395 MPP_CSTP1 Homo sapiens 97.0 0.04 8.7E-07 46.8 14.5 64 140-206 195-259 (262)
47 PRK09453 phosphodiesterase; Pr 96.3 0.0037 8.1E-08 50.4 3.5 36 1-40 34-77 (182)
48 cd07392 MPP_PAE1087 Pyrobaculu 96.3 0.022 4.7E-07 45.3 8.0 30 138-167 148-177 (188)
49 cd07384 MPP_Cdc1_like Saccharo 96.1 0.027 5.9E-07 45.2 7.5 40 1-40 52-101 (171)
50 cd08163 MPP_Cdc1 Saccharomyces 96.1 0.084 1.8E-06 45.2 10.6 24 137-160 202-225 (257)
51 cd07403 MPP_TTHA0053 Thermus t 95.9 0.074 1.6E-06 40.5 8.5 29 139-167 79-107 (129)
52 cd08165 MPP_MPPE1 human MPPE1 95.6 0.12 2.5E-06 40.8 9.0 40 1-40 45-90 (156)
53 cd07383 MPP_Dcr2 Saccharomyces 95.4 0.13 2.9E-06 41.8 9.1 37 1-37 48-87 (199)
54 cd07390 MPP_AQ1575 Aquifex aeo 95.1 0.022 4.8E-07 45.3 3.3 36 1-41 49-84 (168)
55 cd07385 MPP_YkuE_C Bacillus su 95.0 0.024 5.2E-07 46.7 3.4 38 1-40 39-77 (223)
56 PRK04036 DNA polymerase II sma 94.9 0.24 5.3E-06 46.5 10.2 52 153-208 442-503 (504)
57 cd08166 MPP_Cdc1_like_1 unchar 94.8 0.023 5E-07 46.7 2.7 39 1-39 49-93 (195)
58 PRK11340 phosphodiesterase Yae 94.7 0.03 6.5E-07 48.2 3.3 37 1-39 87-125 (271)
59 cd07388 MPP_Tt1561 Thermus the 93.5 0.087 1.9E-06 44.2 3.7 53 137-197 165-217 (224)
60 PF06874 FBPase_2: Firmicute f 93.4 0.06 1.3E-06 51.1 2.9 69 139-209 507-585 (640)
61 cd00840 MPP_Mre11_N Mre11 nucl 93.4 0.073 1.6E-06 43.6 3.0 41 1-41 48-91 (223)
62 TIGR03729 acc_ester putative p 93.4 0.077 1.7E-06 44.6 3.2 29 137-165 195-223 (239)
63 cd07391 MPP_PF1019 Pyrococcus 93.3 0.081 1.8E-06 42.2 3.2 39 1-40 48-89 (172)
64 KOG0376 Serine-threonine phosp 93.1 0.0016 3.6E-08 59.5 -7.7 178 2-184 79-298 (476)
65 KOG0918 Selenium-binding prote 92.8 0.0039 8.5E-08 55.9 -5.5 188 1-200 54-251 (476)
66 cd07393 MPP_DR1119 Deinococcus 92.5 0.11 2.4E-06 43.6 2.9 43 139-183 181-226 (232)
67 COG0622 Predicted phosphoester 92.3 4.1 8.8E-05 32.8 11.7 67 140-211 98-167 (172)
68 TIGR00619 sbcd exonuclease Sbc 92.3 0.17 3.6E-06 43.2 3.9 39 1-39 46-88 (253)
69 cd07396 MPP_Nbla03831 Homo sap 91.8 0.17 3.6E-06 43.4 3.3 58 138-199 202-262 (267)
70 PRK11148 cyclic 3',5'-adenosin 91.4 0.21 4.5E-06 42.9 3.4 67 138-208 181-260 (275)
71 cd07401 MPP_TMEM62_N Homo sapi 91.3 0.25 5.3E-06 42.1 3.9 28 143-170 190-217 (256)
72 cd07402 MPP_GpdQ Enterobacter 91.2 0.24 5.1E-06 41.2 3.5 26 139-164 169-195 (240)
73 COG1408 Predicted phosphohydro 91.2 0.21 4.6E-06 43.5 3.3 38 1-40 80-119 (284)
74 PRK10966 exonuclease subunit S 89.7 0.36 7.8E-06 44.2 3.6 39 1-40 46-88 (407)
75 PHA02546 47 endonuclease subun 89.2 0.42 9E-06 42.6 3.6 40 1-40 46-90 (340)
76 TIGR00024 SbcD_rel_arch putati 88.2 0.48 1E-05 39.8 3.1 36 1-40 65-103 (225)
77 COG3855 Fbp Uncharacterized pr 87.7 0.68 1.5E-05 42.7 3.9 38 1-43 197-234 (648)
78 COG1409 Icc Predicted phosphoh 87.0 0.63 1.4E-05 39.4 3.3 41 1-42 40-81 (301)
79 COG2908 Uncharacterized protei 87.0 1.4 3E-05 37.3 5.1 55 138-200 174-228 (237)
80 cd07386 MPP_DNA_pol_II_small_a 86.7 0.41 8.9E-06 40.3 1.9 38 1-40 42-95 (243)
81 cd07398 MPP_YbbF-LpxH Escheric 86.5 0.64 1.4E-05 37.9 2.9 30 138-167 176-205 (217)
82 COG0420 SbcD DNA repair exonuc 86.0 0.68 1.5E-05 41.8 3.0 39 2-40 48-89 (390)
83 TIGR00583 mre11 DNA repair pro 85.8 0.81 1.8E-05 41.9 3.4 21 1-21 49-69 (405)
84 cd00839 MPP_PAPs purple acid p 84.9 0.71 1.5E-05 39.6 2.5 35 139-173 181-215 (294)
85 COG4186 Predicted phosphoester 84.0 1.2 2.6E-05 35.4 3.2 36 1-40 52-87 (186)
86 cd08164 MPP_Ted1 Saccharomyces 82.0 1.4 2.9E-05 36.3 2.9 13 27-39 99-111 (193)
87 COG1407 Predicted ICC-like pho 76.6 3 6.5E-05 35.3 3.4 57 11-91 85-141 (235)
88 KOG3662 Cell division control 76.6 2.4 5.2E-05 38.7 3.0 38 1-38 100-143 (410)
89 cd07378 MPP_ACP5 Homo sapiens 75.3 2.5 5.5E-05 35.9 2.8 27 140-166 190-216 (277)
90 COG1311 HYS2 Archaeal DNA poly 69.3 9.8 0.00021 35.4 5.2 52 153-209 420-472 (481)
91 cd00842 MPP_ASMase acid sphing 65.2 7.1 0.00015 33.6 3.3 41 1-41 75-124 (296)
92 PLN02533 probable purple acid 52.9 13 0.00028 34.3 2.9 26 140-165 311-336 (427)
93 KOG3339 Predicted glycosyltran 51.2 61 0.0013 26.6 6.2 80 5-86 45-140 (211)
94 PF06874 FBPase_2: Firmicute f 50.6 35 0.00076 33.0 5.4 36 1-41 191-226 (640)
95 COG1768 Predicted phosphohydro 49.3 13 0.00027 30.5 2.0 22 139-160 175-196 (230)
96 cd07387 MPP_PolD2_C PolD2 (DNA 47.9 52 0.0011 28.2 5.7 50 153-207 205-257 (257)
97 PF09637 Med18: Med18 protein; 46.7 28 0.0006 29.6 3.8 70 139-212 139-212 (250)
98 cd07406 MPP_CG11883_N Drosophi 43.5 18 0.00039 30.6 2.3 33 1-38 45-82 (257)
99 cd00845 MPP_UshA_N_like Escher 40.4 25 0.00054 29.3 2.6 20 144-163 186-206 (252)
100 PF05413 Peptidase_C34: Putati 30.6 23 0.00051 24.7 0.7 9 29-37 80-88 (92)
101 cd07411 MPP_SoxB_N Thermus the 30.3 44 0.00095 28.3 2.5 19 144-162 199-218 (264)
102 smart00854 PGA_cap Bacterial c 30.2 1.2E+02 0.0026 25.1 5.2 33 149-183 203-235 (239)
103 cd07410 MPP_CpdB_N Escherichia 29.8 39 0.00085 28.7 2.2 21 143-163 209-230 (277)
104 cd00844 MPP_Dbr1_N Dbr1 RNA la 29.6 67 0.0015 27.5 3.6 27 137-163 202-228 (262)
105 COG2908 Uncharacterized protei 28.7 1.1E+02 0.0024 26.0 4.6 25 134-158 189-213 (237)
106 COG3433 Aryl carrier domain [S 28.2 25 0.00054 24.1 0.5 22 3-24 23-44 (74)
107 COG3855 Fbp Uncharacterized pr 26.8 75 0.0016 29.8 3.5 59 139-197 514-581 (648)
108 PF10083 DUF2321: Uncharacteri 26.0 23 0.0005 28.0 0.1 45 139-189 23-76 (158)
109 cd07408 MPP_SA0022_N Staphyloc 25.3 53 0.0012 27.7 2.2 15 150-164 200-214 (257)
110 cd01580 AcnA_IRP_Swivel Aconit 25.2 27 0.00059 28.0 0.3 13 28-40 39-51 (171)
111 PF13258 DUF4049: Domain of un 24.5 39 0.00085 28.8 1.2 58 27-91 128-187 (318)
112 TIGR03729 acc_ester putative p 24.0 1.1E+02 0.0025 25.2 3.9 36 1-39 39-74 (239)
113 PRK11148 cyclic 3',5'-adenosin 24.0 3.6E+02 0.0079 22.7 7.2 37 1-39 62-98 (275)
114 KOG2551 Phospholipase/carboxyh 23.9 82 0.0018 26.6 2.9 35 117-151 60-103 (230)
115 COG4119 Predicted NTP pyrophos 23.7 2.5E+02 0.0053 21.7 5.2 37 142-181 55-91 (161)
116 PTZ00422 glideosome-associated 23.3 59 0.0013 29.7 2.2 23 142-164 239-261 (394)
117 COG3168 PilP Tfp pilus assembl 21.7 4.2E+02 0.0091 21.1 6.7 46 172-221 118-163 (170)
No 1
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-76 Score=482.08 Aligned_cols=227 Identities=65% Similarity=1.234 Sum_probs=221.7
Q ss_pred CccccCCCCCcHHHHHHHHhccccCCCeEEEEccCcccchhhcccCcHHHHHHHhCChhhHHHHHHHHhcCccceeecCe
Q 027185 1 MGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESE 80 (227)
Q Consensus 1 LGDyVDRG~~s~evl~~l~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~f~~LPla~~i~~~ 80 (227)
||||||||.+|+|++++|++||++||++|++||||||.+.++..|||++||.+|||+..+|+.+.+.|+.||++|+|+++
T Consensus 76 LGDyVDRG~~SvEt~lLLl~lK~rYP~ritLiRGNHEsRqitqvYGFY~EclrKYG~~~vWr~c~eiFdyL~l~aiid~k 155 (303)
T KOG0372|consen 76 LGDYVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSANVWRYCTEIFDYLSLAAIIDGK 155 (303)
T ss_pred ecchhccccchHHHHHHHHHHhhcCcceeEEeeccchhhhhhhhhhHHHHHHHHcCChHHHHHHHHHHHhhhHhheecCc
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCccccccccccccccccCCCCCccccccCCCCCCCCCCcCCCCCeeeeCHHHHHHHHhhCCceEEEeccc
Q 027185 81 IFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQ 160 (227)
Q Consensus 81 ~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~~~~~~rg~g~~fG~~~~~~fl~~~~~~~iiRgH~ 160 (227)
+||||||++|++.+++||+.+.|..++|.++.++|+|||||.+.++|..|+||+|+.||.+++++|++.||+++|+|+||
T Consensus 156 ifCVHGGlSP~i~~lDqIr~lDR~~Eiph~g~m~DllWSDPee~~g~~~SPRGaGylFG~dvv~~F~~~N~~~~I~RaHQ 235 (303)
T KOG0372|consen 156 IFCVHGGLSPSIQTLDQIRVLDRKQEVPHDGAMCDLLWSDPEEGPGWGLSPRGAGYLFGEDVVESFLEANGLSLICRAHQ 235 (303)
T ss_pred EEEEcCCCCcchhhHHHHHHhhccccCCCCCcchheeccCcccCCCcccCCCCccccccHHHHHHHHHhCChHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccceeEecCCeEEEEEcCCCCCCCCCCeEEEEEEeCCCCeEEEEEecCCCCCCCCCCCC-CCCCCC
Q 027185 161 LVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCRSHTFIQFEPAPRRGEPDVTRR-TPDYFL 227 (227)
Q Consensus 161 ~~~~G~~~~~~~~~iTifSa~~y~~~~~N~~avl~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 227 (227)
.+++||++.++++++|||||||||++++|.||||.++++....|..|+++|+.++..++++ +.+||+
T Consensus 236 Lv~eGyk~~F~~~v~TVWSAPNYCYrCGN~AsIl~lde~~~~~F~vFeaa~~~~~~~~~kk~~~~yFl 303 (303)
T KOG0372|consen 236 LVMEGYKWHFDEKVVTVWSAPNYCYRCGNVAAILELDEDLDKDFRVFEAAPQESRGIPAKKPIADYFL 303 (303)
T ss_pred HHHhhHHHhcCCceEEEecCCchhhhcCChHHheeeccccCcceEeeecchhhhcCCcccCcchhhcC
Confidence 9999999999999999999999999999999999999999999999999999988777666 668986
No 2
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-68 Score=430.52 Aligned_cols=227 Identities=59% Similarity=1.117 Sum_probs=223.1
Q ss_pred CccccCCCCCcHHHHHHHHhccccCCCeEEEEccCcccchhhcccCcHHHHHHHhCChhhHHHHHHHHhcCccceeecCe
Q 027185 1 MGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESE 80 (227)
Q Consensus 1 LGDyVDRG~~s~evl~~l~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~f~~LPla~~i~~~ 80 (227)
+|||||||.+|+|++.+|+.||.+||.++.+||||||.+.+...|||++||..|||+...|+.+..+|+.|++||+|+++
T Consensus 79 mGDfVDRGyySLEtfT~l~~LkaryP~~ITLlRGNHEsRqitqVYGFydECq~KYGnan~wkycckVFD~LtlaAiID~~ 158 (306)
T KOG0373|consen 79 MGDFVDRGYYSLETFTLLLLLKARYPAKITLLRGNHESRQITQVYGFYDECQNKYGNANVWKYCCKVFDFLTLAAIIDEK 158 (306)
T ss_pred eccccccccccHHHHHHHHHHhhcCCceeEEeeccchhhhhhhhhhhHHHHHhhcCCchHHHHHHHHHhhhhHHHHhcCc
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCccccccccccccccccCCCCCccccccCCCCCCCCCCcCCCCCeeeeCHHHHHHHHhhCCceEEEeccc
Q 027185 81 IFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQ 160 (227)
Q Consensus 81 ~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~~~~~~rg~g~~fG~~~~~~fl~~~~~~~iiRgH~ 160 (227)
++|||||+||++.+++||+-|.|-+++|..+..+|++||||++.+.|..++||+|++||++.+.+|+..|++++|.|+||
T Consensus 159 vLCVHGGLSPdirtlDqir~i~R~qEiPh~G~fcDlmWSDPedve~W~vSpRGAGwlFGskVt~eF~~iN~L~LicRaHQ 238 (306)
T KOG0373|consen 159 VLCVHGGLSPDIRTLDQIRLIERNQEIPHEGPFCDLMWSDPEDVETWAVSPRGAGWLFGSKVTTEFNHINNLNLICRAHQ 238 (306)
T ss_pred EEEEcCCCCccceeHHHHHhHHhhccCCCCCCccceeccChhhhhhheeCCCCcceeechhhhHHHHhccchHHHHhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccceeEecCCe-EEEEEcCCCCCCCCCCeEEEEEEeCCCCeEEEEEecCCCCCCCCCCCCCCCCCC
Q 027185 161 LVMDGFNWAHEQK-VVTIFSAPNYCYRCGNMASILEVDDCRSHTFIQFEPAPRRGEPDVTRRTPDYFL 227 (227)
Q Consensus 161 ~~~~G~~~~~~~~-~iTifSa~~y~~~~~N~~avl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (227)
.|.+||++.+++| ++|||||||||++++|.|+||.++++++.++..|.+.|..++..+.+...+|||
T Consensus 239 LV~EG~KymF~eK~lvTVWSAPNYCYRCGNvAsi~~~d~~~~r~~k~F~avpd~~~~~p~r~~~pYFl 306 (306)
T KOG0373|consen 239 LVQEGFKYMFDEKGLVTVWSAPNYCYRCGNVASIMSFDDNLERETKIFSAVPDNSRVIPPRTRAPYFL 306 (306)
T ss_pred HHHhhHHhccCCCCEEEEecCCchhhhccCeeeEEEecccCCccceeeeecCCccccCCCCCCCCCcC
Confidence 9999999999888 999999999999999999999999999999999999999999888999999997
No 3
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=100.00 E-value=2.5e-65 Score=443.87 Aligned_cols=227 Identities=56% Similarity=1.073 Sum_probs=213.9
Q ss_pred CccccCCCCCcHHHHHHHHhccccCCCeEEEEccCcccchhhcccCcHHHHHHHhCChhhHHHHHHHHhcCccceeecCe
Q 027185 1 MGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESE 80 (227)
Q Consensus 1 LGDyVDRG~~s~evl~~l~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~f~~LPla~~i~~~ 80 (227)
||||||||++|+|++.+|+++|..+|.++++||||||.+.++..|||.+|+..+||...+|+.++++|++||++|+++++
T Consensus 76 LGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~ky~~~~~~~~~~~~f~~LPlaaii~~~ 155 (303)
T PTZ00239 76 IGDFVDRGYNSVETMEYLLCLKVKYPGNITLLRGNHESRQCTQVYGFYEEILRKYGNSNPWRLFMDVFDCLPLAALIEGQ 155 (303)
T ss_pred eeeEcCCCCCHHHHHHHHHHhhhcCCCcEEEEecccchHHHhhhcChHHHHHHHhcChhHHHHHHHHHHhCchheEEcCe
Confidence 79999999999999999999999999999999999999999999999999999998778999999999999999999999
Q ss_pred EEEEeCCCCCCccccccccccccccccCCCCCccccccCCCCCCCCCCcCCCCCeeeeCHHHHHHHHhhCCceEEEeccc
Q 027185 81 IFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQ 160 (227)
Q Consensus 81 ~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~~~~~~rg~g~~fG~~~~~~fl~~~~~~~iiRgH~ 160 (227)
++|||||++|...+++++++++||.++|.++++.|+|||||.+..+|.+++||.|+.||++++++||++||+++||||||
T Consensus 156 i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He 235 (303)
T PTZ00239 156 ILCVHGGLSPDMRTIDQIRTIDRKIEIPHEGPFCDLMWSDPEEVEYWAVNSRGAGYLFGAKVTKEFCRLNDLTLICRAHQ 235 (303)
T ss_pred EEEEcCccCcccccHhhhccccCCCCCCCCCCceeeEecCccccCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcCh
Confidence 99999999999999999999999999999999999999999988899999999999999999999999999999999999
Q ss_pred ccccceeEecC-CeEEEEEcCCCCCCCCCCeEEEEEEeCCCCeEEEEEecCCCCCCCCCCCCCCCCCC
Q 027185 161 LVMDGFNWAHE-QKVVTIFSAPNYCYRCGNMASILEVDDCRSHTFIQFEPAPRRGEPDVTRRTPDYFL 227 (227)
Q Consensus 161 ~~~~G~~~~~~-~~~iTifSa~~y~~~~~N~~avl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (227)
++++||++.++ ++|+|||||||||+..+|+||+|.++++.++.|.+|+|.++.....+.+..+.||+
T Consensus 236 ~~~~G~~~~~~~~~~iTvfSa~~Y~~~~~N~~ail~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (303)
T PTZ00239 236 LVMEGYKYWFPDQNLVTVWSAPNYCYRCGNIASILCLDENLQQTWKTFKEVPESAKSINPKNVLPYFL 303 (303)
T ss_pred hhccceEEEeCCCeEEEEECCCcccCCCCceEEEEEECCCCcEeeEEeeCCCcccccCcccCCCCCCC
Confidence 99999998765 55999999999999999999999999999999999999988755555555567875
No 4
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=100.00 E-value=1.9e-64 Score=435.81 Aligned_cols=211 Identities=75% Similarity=1.365 Sum_probs=205.1
Q ss_pred CccccCCCCCcHHHHHHHHhccccCCCeEEEEccCcccchhhcccCcHHHHHHHhCChhhHHHHHHHHhcCccceeecCe
Q 027185 1 MGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESE 80 (227)
Q Consensus 1 LGDyVDRG~~s~evl~~l~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~f~~LPla~~i~~~ 80 (227)
||||||||++|+||+.++++||..+|.++++||||||.+.++..|||.+|+..+|+...+|+.++++|++||++|+++++
T Consensus 75 LGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~ygf~~e~~~~y~~~~l~~~~~~~f~~lPlaaii~~~ 154 (285)
T cd07415 75 LGDYVDRGYYSVETFLLLLALKVRYPDRITLLRGNHESRQITQVYGFYDECLRKYGNANVWKYCTDLFDYLPLAALIDNQ 154 (285)
T ss_pred EeEECCCCcCHHHHHHHHHHHhhcCCCcEEEEecccchHhhhhhcchhHHHHHhcCchHHHHHHHHHHHHhHHHhEeCCe
Confidence 79999999999999999999999999999999999999999999999999999998778999999999999999999999
Q ss_pred EEEEeCCCCCCccccccccccccccccCCCCCccccccCCCCCCCCCCcCCCCCeeeeCHHHHHHHHhhCCceEEEeccc
Q 027185 81 IFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQ 160 (227)
Q Consensus 81 ~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~~~~~~rg~g~~fG~~~~~~fl~~~~~~~iiRgH~ 160 (227)
++|||||++|...+++++++++||.+.+.++++.|+|||||.+..+|.+++||.|+.||++++++||++||+++||||||
T Consensus 155 i~cvHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He 234 (285)
T cd07415 155 IFCVHGGLSPSIDTLDQIRAIDRFQEVPHEGPMCDLLWSDPDDIEGWGISPRGAGYLFGQDVVEEFNHNNGLTLICRAHQ 234 (285)
T ss_pred EEEEcCCCCCCcccHHHhhcccCCCCCCCCCCccceEecCCCccCCCCcCCCCCccccCHHHHHHHHHHCCCeEEEEcCc
Confidence 99999999999999999999999999999999999999999987899999999999999999999999999999999999
Q ss_pred ccccceeEecCCeEEEEEcCCCCCCCCCCeEEEEEEeCCCCeEEEEEecCC
Q 027185 161 LVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCRSHTFIQFEPAP 211 (227)
Q Consensus 161 ~~~~G~~~~~~~~~iTifSa~~y~~~~~N~~avl~i~~~~~~~~~~~~~~~ 211 (227)
++++||++.++++|+||||||+||+..+|+||+|.|++++++++++|+|.|
T Consensus 235 ~~~~G~~~~~~~~~~TvfSa~~y~~~~~n~~a~l~i~~~~~~~~~~~~~~~ 285 (285)
T cd07415 235 LVMEGYQWMFDDKLVTVWSAPNYCYRCGNVASIMELDEHLKRSFKVFEAAP 285 (285)
T ss_pred cccceEEEecCCcEEEEecCCcccCCCCceEEEEEECCCCcEeEEEeccCC
Confidence 999999999999999999999999999999999999999999999999875
No 5
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=100.00 E-value=7.3e-64 Score=436.25 Aligned_cols=213 Identities=46% Similarity=0.943 Sum_probs=205.4
Q ss_pred CccccCCCCCcHHHHHHHHhccccCCCeEEEEccCcccchhhcccCcHHHHHHHhCChhhHHHHHHHHhcCccceeecCe
Q 027185 1 MGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESE 80 (227)
Q Consensus 1 LGDyVDRG~~s~evl~~l~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~f~~LPla~~i~~~ 80 (227)
||||||||++|+||+.+++++|..+|++|++||||||.+.++..|||..|+..+| ...+|..++++|++||+||+++++
T Consensus 92 LGDyVDRG~~s~evl~ll~~lki~~p~~v~llRGNHE~~~~~~~ygF~~e~~~~y-~~~l~~~~~~~F~~LPlaAiI~~~ 170 (320)
T PTZ00480 92 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-TIKLWKTFTDCFNCLPVAALIDEK 170 (320)
T ss_pred eceecCCCCCcHHHHHHHHHhcccCCCceEEEecccchhhhhhhcchHHHHHhhc-CHHHHHHHHHHHHhccHhheecCc
Confidence 7999999999999999999999999999999999999999999999999999999 578999999999999999999999
Q ss_pred EEEEeCCCCCCccccccccccccccccCCCCCccccccCCCCC-CCCCCcCCCCCeeeeCHHHHHHHHhhCCceEEEecc
Q 027185 81 IFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAH 159 (227)
Q Consensus 81 ~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdP~~-~~~~~~~~rg~g~~fG~~~~~~fl~~~~~~~iiRgH 159 (227)
+|||||||+|.+.++++++.++||.+.+.++++.|+|||||.. ..+|.+++||.|++||++++++||++||+++|||||
T Consensus 171 i~cvHGGI~p~~~~l~~i~~i~rp~~~~~~~~~~dllWSDP~~~~~~~~~s~RG~g~~FG~~~~~~Fl~~n~l~~IiR~H 250 (320)
T PTZ00480 171 ILCMHGGLSPELSNLEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWADNERGVSYVFSQEIVQVFLKKHELDLICRAH 250 (320)
T ss_pred EEEEcCCcCcccCCHHHHhcccCCCCCCccchhhheeecCcccccCCCccCCCCCccccCHHHHHHHHHhCCCcEEEEcC
Confidence 9999999999999999999999999999999999999999984 578999999999999999999999999999999999
Q ss_pred cccccceeEecCCeEEEEEcCCCCCCCCCCeEEEEEEeCCCCeEEEEEecCCCCC
Q 027185 160 QLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCRSHTFIQFEPAPRRG 214 (227)
Q Consensus 160 ~~~~~G~~~~~~~~~iTifSa~~y~~~~~N~~avl~i~~~~~~~~~~~~~~~~~~ 214 (227)
|++++||++.++++|+||||||+||+..+|+||+|.|++++++.|++|+|.++..
T Consensus 251 q~v~~G~~~~~~~~~iTvFSa~~Y~~~~~N~ga~l~i~~~~~~~~~~~~p~~~~~ 305 (320)
T PTZ00480 251 QVVEDGYEFFSKRQLVTLFSAPNYCGEFDNAGSMMTIDESLMCSFQILKPAEQGQ 305 (320)
T ss_pred ccccCceEEeCCCcEEEEeCCcccCCCCCccEEEEEECCCCcEeEEEecCCcccc
Confidence 9999999999999999999999999999999999999999999999999887653
No 6
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=100.00 E-value=1.7e-64 Score=441.70 Aligned_cols=210 Identities=49% Similarity=0.987 Sum_probs=205.2
Q ss_pred CccccCCCCCcHHHHHHHHhccccCCCeEEEEccCcccchhhcccCcHHHHHHHhCChhhHHHHHHHHhcCccceeecCe
Q 027185 1 MGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESE 80 (227)
Q Consensus 1 LGDyVDRG~~s~evl~~l~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~f~~LPla~~i~~~ 80 (227)
||||||||++|+|++.+|+++|++||++|++||||||.+.++..|||++||..+|+...+|+.++++|+.||++|+|+++
T Consensus 93 LGDYVDRG~~slE~i~LL~a~Ki~yp~~~~lLRGNHE~~~in~~yGFydE~~rr~~~~~~w~~F~~~f~~mp~~a~i~~k 172 (331)
T KOG0374|consen 93 LGDYVDRGKQSLETICLLFALKIKYPENVFLLRGNHECASINRIYGFYDECKRRYGEIKLWKAFNDAFNCLPLAALIDGK 172 (331)
T ss_pred ecccccCCccceEEeehhhhhhhhCCceEEEeccccccccccceeeeHHHHHHhcchHHHHHHHHHHHhhCchhheecce
Confidence 79999999999999999999999999999999999999999999999999999996578999999999999999999999
Q ss_pred EEEEeCCCCCCccccccccccccccccCCCCCccccccCCCCC-CCCCCcCCCCCeeeeCHHHHHHHHhhCCceEEEecc
Q 027185 81 IFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAH 159 (227)
Q Consensus 81 ~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdP~~-~~~~~~~~rg~g~~fG~~~~~~fl~~~~~~~iiRgH 159 (227)
++|+|||++|.+.++++|+.|.||.+.++.++++|++||||.+ ..+|..|.||.++.||++++++||+++++++|+|+|
T Consensus 173 I~CmhGGlsp~l~~~~~i~~i~rp~~~~~~gll~DLlWsdp~~~~~g~~~n~Rg~s~~fg~~~v~~f~~~~~ldlivRaH 252 (331)
T KOG0374|consen 173 ILCMHGGLSPHLKSLDQIRAIPRPTDSPDKGLLCDLLWSDPDDDVPGWEENDRGVSFTFGPAVVEDFCKKLDLDLIVRAH 252 (331)
T ss_pred EEEecCCCChhhcChHHHhhccCCcCCCccceeeeeeecCCCCCCCCcccCCCceeeEecHHHHHHHHHHhCcceEEEcC
Confidence 9999999999999999999999999999999999999999995 689999999999999999999999999999999999
Q ss_pred cccccceeEecCCeEEEEEcCCCCCCCCCCeEEEEEEeCCCCeEEEEEecC
Q 027185 160 QLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCRSHTFIQFEPA 210 (227)
Q Consensus 160 ~~~~~G~~~~~~~~~iTifSa~~y~~~~~N~~avl~i~~~~~~~~~~~~~~ 210 (227)
|++++||+++.+++++||||||+|||.+.|.||+|.|++++.++|..++|.
T Consensus 253 qvv~dGyeffa~r~lvTIFSAP~Ycg~~~n~gavm~Vd~~l~~sf~~l~p~ 303 (331)
T KOG0374|consen 253 QVVEDGYEFFAGRKLVTIFSAPNYCGEFDNAGAVMRVDKNLKCSFVILRPE 303 (331)
T ss_pred ccccccceEecCceEEEEecCchhccccCCceEEEEECCCCeEEEEEeccc
Confidence 999999999999999999999999999999999999999999999999995
No 7
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=100.00 E-value=2.3e-63 Score=433.69 Aligned_cols=207 Identities=33% Similarity=0.646 Sum_probs=189.7
Q ss_pred CccccCCCCCcHHHHHHHHhccccCCCeEEEEccCcccchhhcccCcHHHHHHHhCC--hhhHHHHHHHHhcCccceeec
Q 027185 1 MGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGN--ANIWKIFTDLFDYFPLTALVE 78 (227)
Q Consensus 1 LGDyVDRG~~s~evl~~l~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~g~--~~~~~~~~~~f~~LPla~~i~ 78 (227)
||||||||++|+||+.+|++||+.+|++|++||||||.+.++..|||.+||..+|+. ..+|+.++++|++||+||+++
T Consensus 85 LGDyVDRG~~s~Evl~ll~~lk~~~p~~v~llRGNHE~~~~~~~yGf~~e~~~~y~~~~~~l~~~~~~~F~~LPlaaii~ 164 (321)
T cd07420 85 NGDFVDRGKRSIEILIILFAFFLVYPNEVHLNRGNHEDHIMNLRYGFTKEVMSKYKLHGKKILRLLEDVFSWLPLATIID 164 (321)
T ss_pred eccccCCCCCcHHHHHHHHHHhhcCCCcEEEecCchhhhhhhhhcChHHHHHHHhCccHHHHHHHHHHHHHhCCceEEEc
Confidence 799999999999999999999999999999999999999999999999999999974 689999999999999999999
Q ss_pred CeEEEEeCCCCCCccccccccccccccc-----cCC----------------------CCCccccccCCCCCCCC-CCcC
Q 027185 79 SEIFCLHGGLSPSIETLDNIRNFDRVQE-----VPH----------------------EGPMCDLLWSDPDDRCG-WGIS 130 (227)
Q Consensus 79 ~~~l~vHgGi~p~~~~~~~i~~i~r~~~-----~~~----------------------~~~~~dllWsdP~~~~~-~~~~ 130 (227)
+++|||||||+| ..++++|++|+|+.. .|. .+++.|+|||||.+..+ |.++
T Consensus 165 ~~i~cvHGGi~~-~~~l~~i~~i~r~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlLWSDP~~~~~~~~~~ 243 (321)
T cd07420 165 NKILVVHGGISD-STDLDLLDKIDRHKYVSVLRPPLRKGMEELTGEEEDPSEPLDKTEWRQILDILWSDPKAQKGCKPNT 243 (321)
T ss_pred CCEEEEeCCCCC-ccCHHHHHhhhccccccccCCCccccccccccccccccccccccccchhheeeecCCccCCCCCccC
Confidence 999999999997 468899999888421 111 13578999999996555 6667
Q ss_pred CCCCeeeeCHHHHHHHHhhCCceEEEecccccccceeEecCCeEEEEEcCCCCCCCCCCeEEEEEEeCCCCeEEEEEe
Q 027185 131 PRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCRSHTFIQFE 208 (227)
Q Consensus 131 ~rg~g~~fG~~~~~~fl~~~~~~~iiRgH~~~~~G~~~~~~~~~iTifSa~~y~~~~~N~~avl~i~~~~~~~~~~~~ 208 (227)
+||.|+.||++++++||++|++++||||||++++||++.++++|+|||||||||+..+|+||+|.|+++++++|.+|.
T Consensus 244 ~RG~g~~FG~~~~~~Fl~~n~l~~IIR~He~v~~G~~~~~~~~~iTvFSa~nY~~~~~N~gavl~i~~~~~~~f~~~~ 321 (321)
T cd07420 244 FRGGGCYFGPDVTSKVLQKHGLSLLIRSHECKPEGYEFCHNNKVITIFSASNYYEEGSNRGAYIKLGPDLTPHFVQYQ 321 (321)
T ss_pred CCCCccccCHHHHHHHHHHCCCcEEEEcChhhhcceEEecCCeEEEEecCCccCCCCCccEEEEEECCCCceeEEEeC
Confidence 899999999999999999999999999999999999999999999999999999999999999999999999998873
No 8
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=100.00 E-value=1.2e-62 Score=429.51 Aligned_cols=215 Identities=40% Similarity=0.800 Sum_probs=204.7
Q ss_pred CccccCCCCCcHHHHHHHHhccccCCCeEEEEccCcccchhhcccCcHHHHHHHhCChhhHHHHHHHHhcCccceeecCe
Q 027185 1 MGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESE 80 (227)
Q Consensus 1 LGDyVDRG~~s~evl~~l~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~f~~LPla~~i~~~ 80 (227)
||||||||++|+||+.+|++||+.+|++|++||||||.+.++..+||..|+..+| ...+|..++++|++||++++++++
T Consensus 94 LGDyVDRG~~S~Evl~ll~~lki~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~k~-~~~l~~~~~~~f~~LPlaaii~~~ 172 (316)
T cd07417 94 NGDFVDRGSFSVEVILTLFAFKLLYPNHFHLNRGNHETDNMNKMYGFEGEVKAKY-NEQMFDLFSEVFNWLPLAHLINGK 172 (316)
T ss_pred EeeEecCCCChHHHHHHHHHhhhccCCceEEEeeccchHHHHHHhhhcchhhhcc-cHHHHHHHHHHHHhchHhheeCCe
Confidence 7999999999999999999999999999999999999999999999999999999 567999999999999999999999
Q ss_pred EEEEeCCC-CCCccccccccccccccccCCCCCccccccCCCCCCCCCCcCCCCCeeeeCHHHHHHHHhhCCceEEEecc
Q 027185 81 IFCLHGGL-SPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAH 159 (227)
Q Consensus 81 ~l~vHgGi-~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~~~~~~rg~g~~fG~~~~~~fl~~~~~~~iiRgH 159 (227)
++|||||+ ++...+++++++++|+.+.+.++++.|+|||||.+..+|.+++||.|+.||++++++||++||+++|||||
T Consensus 173 ~~~vHgGi~~~~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~s~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~H 252 (316)
T cd07417 173 VLVVHGGLFSDDGVTLDDIRKIDRFRQPPDSGLMCELLWSDPQPQPGRSPSKRGVGCQFGPDVTKRFLEENNLEYIIRSH 252 (316)
T ss_pred EEEEccccccCCCccHHHhhcccCCCCCCccccceeeeecCCCCCCCCCccCCCCceEeCHHHHHHHHHHcCCcEEEECC
Confidence 99999999 45678899999999999888889999999999998788999999999999999999999999999999999
Q ss_pred cccccceeEecCCeEEEEEcCCCCCCCCCCeEEEEEEeC-CCCeEEEEEecCCCCCCC
Q 027185 160 QLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDD-CRSHTFIQFEPAPRRGEP 216 (227)
Q Consensus 160 ~~~~~G~~~~~~~~~iTifSa~~y~~~~~N~~avl~i~~-~~~~~~~~~~~~~~~~~~ 216 (227)
|++++||++.++++|+|||||||||+..+|+||+|.|++ +++++|++|+|.+++...
T Consensus 253 e~~~~G~~~~~~~~~~TvfSa~~Y~~~~~N~ga~~~i~~~~~~~~~~~~~~~~~~~~~ 310 (316)
T cd07417 253 EVKDEGYEVEHDGKCITVFSAPNYCDQMGNKGAFIRITGSDLKPKFTQFEAVPHPNVK 310 (316)
T ss_pred cccceeEEEecCCeEEEEeCCccccCCCCcceEEEEEeCCCceeeeEeccCCCCCCCC
Confidence 999999999999999999999999999999999999998 899999999999877554
No 9
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=100.00 E-value=2.1e-62 Score=424.23 Aligned_cols=208 Identities=42% Similarity=0.858 Sum_probs=200.6
Q ss_pred CccccCCCCCcHHHHHHHHhccccCCCeEEEEccCcccchhhcccCcHHHHHHHhCChhhHHHHHHHHhcCccceeecCe
Q 027185 1 MGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESE 80 (227)
Q Consensus 1 LGDyVDRG~~s~evl~~l~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~f~~LPla~~i~~~ 80 (227)
||||||||++|+||+.+++++|..+|.++++||||||.+.++..|||.+|+..+| ...+|+.++++|+.||++|+++++
T Consensus 85 LGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~y-~~~l~~~~~~~f~~lPlaaii~~~ 163 (294)
T PTZ00244 85 LGDYVDRGKHSVETITLQFCYKIVYPENFFLLRGNHECASINKMYGFFDDVKRRY-NIKLFKAFTDVFNTMPVCCVISEK 163 (294)
T ss_pred eeeEecCCCCHHHHHHHHHHHhhccCCeEEEEecccchHhHhhccChHHHHHHHh-hHHHHHHHHHHHHhCchheEecCe
Confidence 7999999999999999999999999999999999999999999999999999999 478999999999999999999999
Q ss_pred EEEEeCCCCCCccccccccccccccccCCCCCccccccCCCCC-CCCCCcCCCCCeeeeCHHHHHHHHhhCCceEEEecc
Q 027185 81 IFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAH 159 (227)
Q Consensus 81 ~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdP~~-~~~~~~~~rg~g~~fG~~~~~~fl~~~~~~~iiRgH 159 (227)
++|||||++|...++++++.++||.+.+.++++.|+|||||.+ ..+|.+++||.|+.||++++++||++||+++|||||
T Consensus 164 il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~H 243 (294)
T PTZ00244 164 IICMHGGLSPDLTSLASVNEIERPCDVPDRGILCDLLWADPEDEVRGFLESDRGVSYLFGEDIVNDFLDMVDMDLIVRAH 243 (294)
T ss_pred eEEEcCCCCchhhHHHHhhhhccccCCCccchhheeeecCcccccCCCCcCCCCCccccCHHHHHHHHHHcCCcEEEEcC
Confidence 9999999999999999999999999999999999999999985 679999999999999999999999999999999999
Q ss_pred cccccceeEecCCeEEEEEcCCCCCCCCCCeEEEEEEeCCCCeEEEEEec
Q 027185 160 QLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCRSHTFIQFEP 209 (227)
Q Consensus 160 ~~~~~G~~~~~~~~~iTifSa~~y~~~~~N~~avl~i~~~~~~~~~~~~~ 209 (227)
|++++||++.++++|+||||||+|||..+|+||+|.|+++.+++|.+|++
T Consensus 244 q~~~~G~~~~~~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~f~~~~~ 293 (294)
T PTZ00244 244 QVMERGYGFFASRQLVTVFSAPNYCGEFDNDAAVMNIDDKLQCSFLIIPA 293 (294)
T ss_pred ccccCceEEcCCCeEEEEeCCccccCCCCceEEEEEECCCCcEeEEEeec
Confidence 99999999999999999999999999999999999999999999998865
No 10
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=100.00 E-value=3.4e-62 Score=423.25 Aligned_cols=209 Identities=48% Similarity=1.002 Sum_probs=201.6
Q ss_pred CccccCCCCCcHHHHHHHHhccccCCCeEEEEccCcccchhhcccCcHHHHHHHhCChhhHHHHHHHHhcCccceeecCe
Q 027185 1 MGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESE 80 (227)
Q Consensus 1 LGDyVDRG~~s~evl~~l~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~f~~LPla~~i~~~ 80 (227)
||||||||++|+|++.+|+++|..+|+++++||||||.+.++..+||..|+..+| ...+|..++++|++||++|+++++
T Consensus 83 LGDyVDRG~~s~e~i~ll~~lk~~~p~~i~llrGNHE~~~~~~~~gf~~e~~~~y-~~~l~~~~~~~f~~lPlaa~i~~~ 161 (293)
T cd07414 83 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPVAAIIDEK 161 (293)
T ss_pred EeeEecCCCCcHHHHHHHHHhhhhCCCcEEEEecccchhhHhhhcchhhHHHHhh-hHHHHHHHHHHHHHhHHHHhhCCc
Confidence 7999999999999999999999999999999999999999999999999999999 578999999999999999999999
Q ss_pred EEEEeCCCCCCccccccccccccccccCCCCCccccccCCCCC-CCCCCcCCCCCeeeeCHHHHHHHHhhCCceEEEecc
Q 027185 81 IFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAH 159 (227)
Q Consensus 81 ~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdP~~-~~~~~~~~rg~g~~fG~~~~~~fl~~~~~~~iiRgH 159 (227)
++|||||++|.+.+++++++++||.+.+.++++.|+|||||.. ..+|.+++||.|+.||.+++++||++||+++|||||
T Consensus 162 i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~H 241 (293)
T cd07414 162 IFCMHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGKDVVAKFLNKHDLDLICRAH 241 (293)
T ss_pred EEEEccCCCcccCcHHHHhcccCCCCCCchhhHhhhhccCcccccCCCccCCCCcceecCHHHHHHHHHHcCCeEEEECC
Confidence 9999999999999999999999999999999999999999984 678999999999999999999999999999999999
Q ss_pred cccccceeEecCCeEEEEEcCCCCCCCCCCeEEEEEEeCCCCeEEEEEecC
Q 027185 160 QLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCRSHTFIQFEPA 210 (227)
Q Consensus 160 ~~~~~G~~~~~~~~~iTifSa~~y~~~~~N~~avl~i~~~~~~~~~~~~~~ 210 (227)
|++++||++.++++|+||||||+|||..+|+||+|.|+++++++|++|+|.
T Consensus 242 e~~~~G~~~~~~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~~~~~~~~ 292 (293)
T cd07414 242 QVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA 292 (293)
T ss_pred ccccCeEEEeCCCcEEEEecCCcccCCCCceEEEEEECCCCcEEEEEecCC
Confidence 999999999999999999999999999999999999999999999999864
No 11
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=100.00 E-value=2.1e-61 Score=414.91 Aligned_cols=209 Identities=56% Similarity=1.020 Sum_probs=201.7
Q ss_pred CccccCCCCCcHHHHHHHHhccccCCCeEEEEccCcccchhhcccCcHHHHHHHhCChhhHHHHHHHHhcCccceeecCe
Q 027185 1 MGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESE 80 (227)
Q Consensus 1 LGDyVDRG~~s~evl~~l~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~f~~LPla~~i~~~ 80 (227)
||||||||++|+||+.++++||..+|.++++||||||.+.++..+||.+|+..+|+ ..+|+.+.++|++||++++++++
T Consensus 61 LGD~VDrG~~s~e~l~~l~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~-~~l~~~~~~~f~~LPl~aii~~~ 139 (271)
T smart00156 61 LGDYVDRGPFSIEVILLLFALKILYPNRVVLLRGNHESRSMNEIYGFYDECKRKYG-EEIYEKFQEAFSWLPLAALIDNK 139 (271)
T ss_pred eCCccCCCCChHHHHHHHHHHHhcCCCCEEEEeccccHHHHHHhccchhhhhhhcC-HHHHHHHHHHHhhChhheEEcCe
Confidence 79999999999999999999999999999999999999999999999999999994 78999999999999999999999
Q ss_pred EEEEeCCCCCCccccccccccccccccCCCCCccccccCCCC-CCCCCCcCCCCCeeeeCHHHHHHHHhhCCceEEEecc
Q 027185 81 IFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPD-DRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAH 159 (227)
Q Consensus 81 ~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdP~-~~~~~~~~~rg~g~~fG~~~~~~fl~~~~~~~iiRgH 159 (227)
++|||||++|.+.+++++++++||.+.+.++.+.|+|||||. ...+|.+|+||.|+.||++++++||++||+++|||||
T Consensus 140 ~~~vHgGi~~~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~H 219 (271)
T smart00156 140 ILCMHGGLSPDLTTLDDIRKLKRPQEPPDEGLLIDLLWSDPDQPVDGFQPSIRGASYYFGPDAVDEFLKKNNLKLIIRAH 219 (271)
T ss_pred EEEEecCCCCccCCHHHHhcccCCCCCCchhhhhheeecCCCcccCCCccCCCCCccccCHHHHHHHHHHCCCeEEEecC
Confidence 999999999999999999999999999989999999999996 5788999999999999999999999999999999999
Q ss_pred cccccceeEecCCeEEEEEcCCCCCCCCCCeEEEEEEeCCCCeEEEEEecC
Q 027185 160 QLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCRSHTFIQFEPA 210 (227)
Q Consensus 160 ~~~~~G~~~~~~~~~iTifSa~~y~~~~~N~~avl~i~~~~~~~~~~~~~~ 210 (227)
|++++||++.++++|+|||||||||+..+|+||++.|++++++++.+|+|.
T Consensus 220 e~~~~G~~~~~~~~~~TvfSa~~y~~~~~n~~a~~~i~~~~~~~~~~~~~~ 270 (271)
T smart00156 220 QVVDDGYEFFHDRKLVTIFSAPNYCGRFGNKAAVLKVDKDLKLSFEQFKPG 270 (271)
T ss_pred cccCCcEEEecCCcEEEEECCcccccCCCceEEEEEECCCCcEEEEEecCC
Confidence 999999999999999999999999998999999999999999999999864
No 12
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=100.00 E-value=3.4e-61 Score=419.31 Aligned_cols=213 Identities=42% Similarity=0.751 Sum_probs=200.1
Q ss_pred CccccCCCCCcHHHHHHHHhccccCCCeEEEEccCcccchhhcccCcHHHHHHHhCChhhHHHHHHHHhcCccceeecCe
Q 027185 1 MGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESE 80 (227)
Q Consensus 1 LGDyVDRG~~s~evl~~l~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~f~~LPla~~i~~~ 80 (227)
||||||||++|+||+.+|++||+.+|++|++||||||.+.++..+||..|+..+| ...+|..++++|++||++++++++
T Consensus 76 LGDyVDRG~~s~Evi~lL~~lki~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~y-~~~l~~~~~~~f~~LPlaaii~~~ 154 (305)
T cd07416 76 LGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKY-SERVYDACMEAFDCLPLAALMNQQ 154 (305)
T ss_pred ECCccCCCCChHHHHHHHHHHHhhcCCCEEEEeCCCcHHHHHHhhCchhHHHHhc-cHHHHHHHHHHHhhccceeEEcCC
Confidence 7999999999999999999999999999999999999999999999999999999 578999999999999999999999
Q ss_pred EEEEeCCCCCCccccccccccccccccCCCCCccccccCCCCCC-------CCCCcC-CCCCeeeeCHHHHHHHHhhCCc
Q 027185 81 IFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDR-------CGWGIS-PRGAGYTFGQDISEQFNHTNNL 152 (227)
Q Consensus 81 ~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdP~~~-------~~~~~~-~rg~g~~fG~~~~~~fl~~~~~ 152 (227)
++|||||++|...+++++++++|+.+.|..+++.|+|||||.+. .+|.++ +||.|+.||++++++||++||+
T Consensus 155 i~~vHGGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~~~Rg~g~~fG~~~~~~Fl~~n~l 234 (305)
T cd07416 155 FLCVHGGLSPELKTLDDIRKLDRFREPPAFGPMCDLLWSDPLEDFGNEKTQEHFVHNTVRGCSYFYSYRAVCEFLQKNNL 234 (305)
T ss_pred EEEEcCCCCcccccHHHhcccCCCCCCCCCCcceeeeecCcccccccccccccccccCCCCCceecCHHHHHHHHHHcCC
Confidence 99999999999999999999999999998999999999999742 246654 8999999999999999999999
Q ss_pred eEEEecccccccceeEecCC------eEEEEEcCCCCCCCCCCeEEEEEEeCCCCeEEEEEecCCCCCC
Q 027185 153 KLIARAHQLVMDGFNWAHEQ------KVVTIFSAPNYCYRCGNMASILEVDDCRSHTFIQFEPAPRRGE 215 (227)
Q Consensus 153 ~~iiRgH~~~~~G~~~~~~~------~~iTifSa~~y~~~~~N~~avl~i~~~~~~~~~~~~~~~~~~~ 215 (227)
++||||||++++||++.+++ +|+|||||||||+..+|+||+|.|+++ .++|++|.+.|++..
T Consensus 235 ~~iiR~He~~~~G~~~~~~~~~~~~~~~iTvFSa~~Y~~~~~N~~a~l~i~~~-~~~~~~~~~~~~~~~ 302 (305)
T cd07416 235 LSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENN-VMNIRQFNCSPHPYW 302 (305)
T ss_pred eEEEEeccccccceEEecCCCcCCCCcEEEEeCCccccCCCCceEEEEEEcCC-cceEEEecCCCCCCC
Confidence 99999999999999998876 999999999999999999999999887 479999999998754
No 13
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-62 Score=402.39 Aligned_cols=227 Identities=83% Similarity=1.461 Sum_probs=223.4
Q ss_pred CccccCCCCCcHHHHHHHHhccccCCCeEEEEccCcccchhhcccCcHHHHHHHhCChhhHHHHHHHHhcCccceeecCe
Q 027185 1 MGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESE 80 (227)
Q Consensus 1 LGDyVDRG~~s~evl~~l~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~f~~LPla~~i~~~ 80 (227)
+|||||||++|.|++.+|.++|++||++|.+||||||.+.+...|||++||++|||+..+|+.|.+.|+++|+.|.|+++
T Consensus 93 mGDyvdrGy~SvetVS~lva~Kvry~~rvtilrGNHEsrqitqvygfydeclRkyg~anvw~~Ftdlfdy~P~tali~~~ 172 (319)
T KOG0371|consen 93 MGDYVDRGYYSVETVSLLVALKVRYPDRVTILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESK 172 (319)
T ss_pred eeeecccccchHHHHHHHHHhhccccceeEEecCchHHHHHHHHHhhHHHHHhhcccccchHHhhhhhhccchHhhhccc
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCccccccccccccccccCCCCCccccccCCCCCCCCCCcCCCCCeeeeCHHHHHHHHhhCCceEEEeccc
Q 027185 81 IFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQ 160 (227)
Q Consensus 81 ~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~~~~~~rg~g~~fG~~~~~~fl~~~~~~~iiRgH~ 160 (227)
++|+|||++|.+.+++.++.+.|.+++|.++.++|||||||+++.+|..++||+|+.||.+..++|-.+||+++|-|+||
T Consensus 173 ifc~HGgLspsi~tld~~r~~dr~~evphegpmcDlLwsdpddr~gwg~sprgag~tfg~di~~~fn~~n~lslisRahq 252 (319)
T KOG0371|consen 173 IFCLHGGLSPSIDTLDLIRLLDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHKNGLSLISRAHQ 252 (319)
T ss_pred eeeccCCcCcccchHHHHHHHHHhhcccCCCChhheeccCcccCCCCCCCCCCCCcccchhhHHHhhccCCchHhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccceeEecCCeEEEEEcCCCCCCCCCCeEEEEEEeCCCCeEEEEEecCCCCCCCCCCCCCCCCCC
Q 027185 161 LVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCRSHTFIQFEPAPRRGEPDVTRRTPDYFL 227 (227)
Q Consensus 161 ~~~~G~~~~~~~~~iTifSa~~y~~~~~N~~avl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (227)
.+++||.|.+...++|||||||||++++|.+|++.++++....|.||+|+|.+.+...+++.|||||
T Consensus 253 lvm~g~nW~~~~~~vtiFSapnycYrcgn~a~i~e~d~~~~~~f~q~~psp~k~e~~vtr~tpDYfL 319 (319)
T KOG0371|consen 253 LVMEGYNWYHLWNVVTIFSAPNYCYRCGNQAAIMERDDTKNYDFLQFDPSPRKVEPDVTRKTPDYFL 319 (319)
T ss_pred HHhcccceeeecceeEEccCCchhhccccHHHHhhhhhccCcceEEecCCccccccccccCCCCCcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999997
No 14
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=100.00 E-value=1.7e-58 Score=403.83 Aligned_cols=209 Identities=42% Similarity=0.792 Sum_probs=195.6
Q ss_pred CccccCCCCCcHHHHHHHHhccccCCCeEEEEccCcccchhhcccCcHHHHHHHhCC-----hhhHHHHHHHHhcCccce
Q 027185 1 MGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGN-----ANIWKIFTDLFDYFPLTA 75 (227)
Q Consensus 1 LGDyVDRG~~s~evl~~l~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~g~-----~~~~~~~~~~f~~LPla~ 75 (227)
||||||||++|+|||.+|++||..+|.+|++||||||.+.++..+||..++..+|+. ..+|..++++|++||+++
T Consensus 89 LGDyVDRGp~s~evl~ll~~lk~~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~~~~~~~~l~~~~~~~f~~LPl~a 168 (311)
T cd07419 89 LGDYVDRGSNSLETICLLLALKVKYPNQIHLIRGNHEDRDINALFGFREECKERLGEDPNDGDSVWRRINRLFEWLPLAA 168 (311)
T ss_pred ECCccCCCCChHHHHHHHHHhhhcCCCcEEEeccccchHHHHHHhcccHHHHHhcCccchhhHHHHHHHHHHHHhCchhh
Confidence 799999999999999999999999999999999999999999999999999999975 368999999999999999
Q ss_pred eecCeEEEEeCCCCCCcccccccccccccc-ccCCCCCccccccCCCCC---CCCCCcCC---CCCe--eeeCHHHHHHH
Q 027185 76 LVESEIFCLHGGLSPSIETLDNIRNFDRVQ-EVPHEGPMCDLLWSDPDD---RCGWGISP---RGAG--YTFGQDISEQF 146 (227)
Q Consensus 76 ~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~-~~~~~~~~~dllWsdP~~---~~~~~~~~---rg~g--~~fG~~~~~~f 146 (227)
+++++++|||||++|.+.++++++.+.||. ..+.++.+.|+|||||.+ ..+|.+++ ||.| +.||++++++|
T Consensus 169 vi~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~rg~g~~~~fg~~~~~~F 248 (311)
T cd07419 169 IIEDKILCMHGGIGRSINHVSEIEDLKRPLTMEFGEQVVMDLLWSDPTENDSVLGLRPNAIDPRGPGLIVKFGPDRVHRF 248 (311)
T ss_pred eecccEEEEccCCCCCCCcHHHHhhcCCCCCCCCCCcceeeeeccCccccccccccccCCCCCCCCCcceeECHHHHHHH
Confidence 999999999999999999999999999997 445567889999999985 34676666 9998 79999999999
Q ss_pred HhhCCceEEEecccccccceeEecCCeEEEEEcCCCCCCCCCCeEEEEEEeCCCCeEEEEEec
Q 027185 147 NHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCRSHTFIQFEP 209 (227)
Q Consensus 147 l~~~~~~~iiRgH~~~~~G~~~~~~~~~iTifSa~~y~~~~~N~~avl~i~~~~~~~~~~~~~ 209 (227)
|++||+++||||||++++||++.++++|+||||||+||+.++|+||++.|+++.++++.+++|
T Consensus 249 l~~n~l~~iiRgHe~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~~ai~~i~~~~~~~~~~~~~ 311 (311)
T cd07419 249 LEENDLQMIIRAHECVMDGFERFAQGKLITLFSATNYCGTAGNAGAILVLGRDLTIIPKLIHP 311 (311)
T ss_pred HHHCCCeEEEEechhhhCCeEEeCCCeEEEEecCCcccCCCCceEEEEEECCCCcEeEEEeCC
Confidence 999999999999999999999999999999999999999999999999999999999999986
No 15
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=100.00 E-value=2.5e-58 Score=407.87 Aligned_cols=213 Identities=39% Similarity=0.686 Sum_probs=192.2
Q ss_pred CccccCCCCCcHHHHHHHHhccccCCCeEEEEccCcccchhhcccCcHHHHHHHhCC--hhhHHHHHHHHhcCccceeec
Q 027185 1 MGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGN--ANIWKIFTDLFDYFPLTALVE 78 (227)
Q Consensus 1 LGDyVDRG~~s~evl~~l~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~g~--~~~~~~~~~~f~~LPla~~i~ 78 (227)
||||||||++|+||+.+|++||..+|++|++||||||.+.++..+||..|+..+|+. ..+|+.++++|++||++++++
T Consensus 100 LGDyVDRGp~SlEvl~lL~~lki~~p~~v~lLRGNHE~~~i~~~~Gf~~E~~~~y~~~~~~l~~~~~~~f~~LPlaavI~ 179 (377)
T cd07418 100 NGDYVDRGAWGLETFLLLLSWKVLLPDRVYLLRGNHESKFCTSMYGFEQEVLTKYGDKGKHVYRKCLGCFEGLPLASIIA 179 (377)
T ss_pred eccccCCCCChHHHHHHHHHHhhccCCeEEEEeeecccccchhhcccchhhhhhcCchHHHHHHHHHHHHHhCCcEEEEC
Confidence 799999999999999999999999999999999999999999999999999999975 479999999999999999999
Q ss_pred CeEEEEeCCCC---------------------------CCcccccccccccccc-ccCCCC---CccccccCCCCCCCCC
Q 027185 79 SEIFCLHGGLS---------------------------PSIETLDNIRNFDRVQ-EVPHEG---PMCDLLWSDPDDRCGW 127 (227)
Q Consensus 79 ~~~l~vHgGi~---------------------------p~~~~~~~i~~i~r~~-~~~~~~---~~~dllWsdP~~~~~~ 127 (227)
+++|||||||+ |.+.++++|++++|+. +++..+ ++.|+|||||.+..+|
T Consensus 180 ~~i~cvHGGI~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~r~~~~~~~~~~~~i~~dlLWSDP~~~~g~ 259 (377)
T cd07418 180 GRVYTAHGGLFRSPSLPKRKKQKGKNRRVLLLEPESESLKLGTLDDLMKARRSVLDPPGEGSNLIPGDVLWSDPSLTPGL 259 (377)
T ss_pred CCEEEECCCcCCcccccccccccccccccccccccccCCCCCCHHHHhhCCCCCCCCCCCCccccceeeEeeCCccCCCC
Confidence 99999999994 3456889999999974 555444 4689999999987788
Q ss_pred CcC-CCCCeeeeCHHHHHHHHhhCCceEEEecccc------------cccceeEecC---CeEEEEEcCCCCC------C
Q 027185 128 GIS-PRGAGYTFGQDISEQFNHTNNLKLIARAHQL------------VMDGFNWAHE---QKVVTIFSAPNYC------Y 185 (227)
Q Consensus 128 ~~~-~rg~g~~fG~~~~~~fl~~~~~~~iiRgH~~------------~~~G~~~~~~---~~~iTifSa~~y~------~ 185 (227)
.++ .||.|+.||++++++||++|++++||||||+ +++||++.++ ++|+||||||||| +
T Consensus 260 ~~~~~RG~g~~FG~~~~~~FL~~n~l~~IIRsHe~~~~~~~~~~~~~v~~Gy~~~~~~~~~~liTvFSa~nY~~~~~~~~ 339 (377)
T cd07418 260 SPNKQRGIGLLWGPDCTEEFLEKNNLKLIIRSHEGPDAREKRPGLAGMNKGYTVDHDVESGKLITLFSAPDYPQFQATEE 339 (377)
T ss_pred CccCCCCCccccCHHHHHHHHHHcCCcEEEECCCCcccccccccchhhhCceEEeccCCCCcEEEEecCCcccccccccc
Confidence 776 7999999999999999999999999999996 6799999887 9999999999999 5
Q ss_pred CCCCeEEEEEEeCC--CCeEEEEEecC-CCC
Q 027185 186 RCGNMASILEVDDC--RSHTFIQFEPA-PRR 213 (227)
Q Consensus 186 ~~~N~~avl~i~~~--~~~~~~~~~~~-~~~ 213 (227)
.++|+||++.++++ .+.+|++|+++ |++
T Consensus 340 ~~~N~ga~~~~~~~~~~~~~~~~~~~~~~~~ 370 (377)
T cd07418 340 RYNNKGAYIILQPPDFSDPQFHTFEAVKPRP 370 (377)
T ss_pred ccCcceEEEEEecCCCCCccceEeeccCCCC
Confidence 78999999999754 47999999998 443
No 16
>KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only]
Probab=100.00 E-value=2.9e-58 Score=394.87 Aligned_cols=214 Identities=42% Similarity=0.747 Sum_probs=201.1
Q ss_pred CccccCCCCCcHHHHHHHHhccccCCCeEEEEccCcccchhhcccCcHHHHHHHhCChhhHHHHHHHHhcCccceeecCe
Q 027185 1 MGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESE 80 (227)
Q Consensus 1 LGDyVDRG~~s~evl~~l~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~f~~LPla~~i~~~ 80 (227)
||||||||.+|+||+.+|++||+.||+.+++||||||++.+...+.|+.||.-|| +..+|+++.+.|+.||+||+.++.
T Consensus 121 LGDYVDRGyFSiECvlYLwsLKi~yp~tl~lLRGNHECrHLT~YFTFKqEc~iKY-se~vYdaCmesFd~LPLAAlmNqQ 199 (517)
T KOG0375|consen 121 LGDYVDRGYFSIECVLYLWSLKINYPKTLFLLRGNHECRHLTEYFTFKQECKIKY-SERVYDACMESFDCLPLAALMNQQ 199 (517)
T ss_pred eccccccceeeeehHHHHHHHhcCCCCeEEEecCCcchhhhHhHhhHHHHHhHhc-cHHHHHHHHHHhccchHHHHhcCc
Confidence 7999999999999999999999999999999999999999999999999999999 899999999999999999999999
Q ss_pred EEEEeCCCCCCccccccccccccccccCCCCCccccccCCCCC-------CCCCC-cCCCCCeeeeCHHHHHHHHhhCCc
Q 027185 81 IFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDD-------RCGWG-ISPRGAGYTFGQDISEQFNHTNNL 152 (227)
Q Consensus 81 ~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdP~~-------~~~~~-~~~rg~g~~fG~~~~~~fl~~~~~ 152 (227)
++|||||++|.+.++++|+.+.|..++|.-++++|||||||.+ .+.|. ++.||+++.|...++++||++||+
T Consensus 200 flCVHGGlSPEi~tl~DIr~l~RF~EpPa~GpmCDLLWsDPlEdfgnek~~e~f~hNsvRGCSyfysy~A~C~FLq~nnL 279 (517)
T KOG0375|consen 200 FLCVHGGLSPEIHTLDDIRKLDRFKEPPAFGPMCDLLWSDPLEDFGNEKTSEHFTHNSVRGCSYFYSYPAVCEFLQNNNL 279 (517)
T ss_pred eEEecCCCCcccccHHHHHhhhhccCCCccCcchhhhccChhhhccccccccccccCccccccceechHHHHHHHHhCCc
Confidence 9999999999999999999999999999999999999999973 12344 356999999999999999999999
Q ss_pred eEEEecccccccceeEecCC------eEEEEEcCCCCCCCCCCeEEEEEEeCCCCeEEEEEecCCCCCCC
Q 027185 153 KLIARAHQLVMDGFNWAHEQ------KVVTIFSAPNYCYRCGNMASILEVDDCRSHTFIQFEPAPRRGEP 216 (227)
Q Consensus 153 ~~iiRgH~~~~~G~~~~~~~------~~iTifSa~~y~~~~~N~~avl~i~~~~~~~~~~~~~~~~~~~~ 216 (227)
-.|||+||.++.||++..+. .+|||||||||.+.++|+||||+. ++..++++||.++|++.+-
T Consensus 280 LSIiRAHEAQDaGYRMYrksqttGFPSLiTiFSAPNYLDvYnNKAAvLKY-EnNVMNIRQFncSPHPYWL 348 (517)
T KOG0375|consen 280 LSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKY-ENNVMNIRQFNCSPHPYWL 348 (517)
T ss_pred hhhhhhhhhhhhhhhhhhcccccCCchheeeecCCchhhhhccHHHHhhh-hcccceeeccCCCCCCccc
Confidence 99999999999999987643 689999999999999999999998 6778999999999998763
No 17
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-48 Score=342.05 Aligned_cols=211 Identities=32% Similarity=0.655 Sum_probs=186.2
Q ss_pred ccccCCCCCcHHHHHHHHhccccCCCeEEEEccCcccchhhcccCcHHHHHHHhCC--hhhHHHHHHHHhcCccceeecC
Q 027185 2 GDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGN--ANIWKIFTDLFDYFPLTALVES 79 (227)
Q Consensus 2 GDyVDRG~~s~evl~~l~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~g~--~~~~~~~~~~f~~LPla~~i~~ 79 (227)
||+||||.+|+|||+.|+++-+.||..+++-|||||+.++|..|||.+|+..+|.. ..+.+.+.++|++||++.+++.
T Consensus 200 GDFVDRGk~siEvLmiL~a~~lv~P~~~~LNRGNHED~mmNlRYGF~kEv~~KYk~~~k~Ilr~leevy~WLPi~tiid~ 279 (631)
T KOG0377|consen 200 GDFVDRGKRSIEVLMILFALYLVYPNAVHLNRGNHEDHMMNLRYGFIKEVESKYKRHGKRILRFLEEVYRWLPIGTIIDS 279 (631)
T ss_pred CchhhccccchhhHHHHHHHHhcCchhhhccCCchHHHHHHHHHhHHHHHHHHhhhcccHHHHHHHHHHHhcchhhhccc
Confidence 99999999999999999999999999999999999999999999999999999953 5788889999999999999999
Q ss_pred eEEEEeCCCCCCccccccccccccccc-----cCC---------C--------CCccccccCCCCCCCCCCcC-CCCCee
Q 027185 80 EIFCLHGGLSPSIETLDNIRNFDRVQE-----VPH---------E--------GPMCDLLWSDPDDRCGWGIS-PRGAGY 136 (227)
Q Consensus 80 ~~l~vHgGi~p~~~~~~~i~~i~r~~~-----~~~---------~--------~~~~dllWsdP~~~~~~~~~-~rg~g~ 136 (227)
++|+||||++.. ++++-+.+|.|..- .|. + .-+.|++||||....|..+| -||.|.
T Consensus 280 ~ilvvHGGiSd~-Tdl~ll~kIeR~k~~Svlrpp~ek~~d~e~~s~~vg~dEW~Qi~DImWSDP~~~~GC~pNt~RGgG~ 358 (631)
T KOG0377|consen 280 RILVVHGGISDS-TDLDLLDKIERGKYVSVLRPPTEKGRDGEKLSKAVGVDEWQQIFDIMWSDPQATMGCVPNTLRGGGC 358 (631)
T ss_pred ceEEEecCcccc-hhHHHHhhhhccceeEEecCCcccCccCCchhhhcChHHHHHHHHHHhcCcccccCCCcccccCCcc
Confidence 999999999864 45555555554310 010 0 12579999999977776666 599999
Q ss_pred eeCHHHHHHHHhhCCceEEEecccccccceeEecCCeEEEEEcCCCCCCCCCCeEEEEEEeCCCCeEEEEEecCCCC
Q 027185 137 TFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCRSHTFIQFEPAPRR 213 (227)
Q Consensus 137 ~fG~~~~~~fl~~~~~~~iiRgH~~~~~G~~~~~~~~~iTifSa~~y~~~~~N~~avl~i~~~~~~~~~~~~~~~~~ 213 (227)
.||++.+.+||++.+++++||+|||.++||++.|+++|+|||||+||.....|+||.+++.......|.||.+++..
T Consensus 359 yFGpDvT~~~Lqk~~l~~liRSHECKpeGyEf~Hd~kvlTiFSASNYYe~GSNrGAYikl~~~~~PhfvQY~a~k~t 435 (631)
T KOG0377|consen 359 YFGPDVTDNFLQKHRLSYLIRSHECKPEGYEFCHDNKVLTIFSASNYYEIGSNRGAYIKLGNQLTPHFVQYQAAKQT 435 (631)
T ss_pred eeCchHHHHHHHHhCceeeeeecccCCCcceeeeCCeEEEEEeccchheecCCCceEEEeCCCCCchHHHHHhhhhh
Confidence 99999999999999999999999999999999999999999999999888899999999999999999999966543
No 18
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=100.00 E-value=9.2e-46 Score=329.52 Aligned_cols=216 Identities=41% Similarity=0.813 Sum_probs=204.2
Q ss_pred ccccCCCCCcHHHHHHHHhccccCCCeEEEEccCcccchhhcccCcHHHHHHHhCChhhHHHHHHHHhcCccceeecCeE
Q 027185 2 GDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEI 81 (227)
Q Consensus 2 GDyVDRG~~s~evl~~l~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~f~~LPla~~i~~~~ 81 (227)
||+||||..|.|++..+++.|+.+|+++|++|||||...++..|||..++..+| .+..+..+.++|..||++..+++++
T Consensus 249 gdfv~rgs~s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~~ky-te~~~~~f~~~f~~LPl~~~i~~~~ 327 (476)
T KOG0376|consen 249 GDFVDRGSWSVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVKAKY-TEEMFNLFSEVFIWLPLAHLINNKV 327 (476)
T ss_pred CceeeecccceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcchhhhh-HHHHHHhhhhhhccccchhhhcCce
Confidence 899999999999999999999999999999999999999999999999999999 6677777779999999999999999
Q ss_pred EEEeCCCC-CCccccccccccccccccCCCCCccccccCCCCCCCCCCcCCCCCeeeeCHHHHHHHHhhCCceEEEeccc
Q 027185 82 FCLHGGLS-PSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQ 160 (227)
Q Consensus 82 l~vHgGi~-p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~~~~~~rg~g~~fG~~~~~~fl~~~~~~~iiRgH~ 160 (227)
+.+|||+. +.-..++++++|.|+...+.++..+++|||||....|..+|.||.|..||.++++.||+.++++.|||||+
T Consensus 328 ~~~hgglf~~~~v~l~d~r~i~r~~~~~~~~~~~~~lws~pq~~~g~s~S~r~~g~~fG~d~t~~f~~~n~l~~i~rshe 407 (476)
T KOG0376|consen 328 LVMHGGLFSPDGVTLEDFRNIDRFEQPPEEGLMCELLWSDPQPANGRSPSKRGVGLQFGPDVTERFLQDNNLDKIIRSHE 407 (476)
T ss_pred EEEecCcCCCCCccHHHHHhhhhccCCcccccccccccCCCccccCCCccccCceeeeCCCchhhHHhhcchHHHhhccc
Confidence 99999985 44568999999999988888999999999999988999999999999999999999999999999999999
Q ss_pred ccccceeEecCCeEEEEEcCCCCCCCCCCeEEEEEEe-CCCCeEEEEEecCCCCCCCCC
Q 027185 161 LVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVD-DCRSHTFIQFEPAPRRGEPDV 218 (227)
Q Consensus 161 ~~~~G~~~~~~~~~iTifSa~~y~~~~~N~~avl~i~-~~~~~~~~~~~~~~~~~~~~~ 218 (227)
..+.||+..|+|+|+|||||||||+..+|+||++.++ ++.+..+++|+|.|+..-..+
T Consensus 408 ~~d~gy~~eh~g~l~tvfsapnycd~~~n~ga~i~~~~~~~~p~~~~~e~vp~~~~~~m 466 (476)
T KOG0376|consen 408 VKDEGYEVEHSGKLITVFSAPNYCDQMGNKGAFIHLEPDDLTPNFYTFEAVPHPDVKPM 466 (476)
T ss_pred cCCCceeeecCCcEEEEecCcchhhhcCCcceEEEecCCCCccceeecccCCCCCCCCc
Confidence 9999999999999999999999999999999999998 678999999999999876544
No 19
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=99.97 E-value=2e-30 Score=216.30 Aligned_cols=184 Identities=46% Similarity=0.797 Sum_probs=146.6
Q ss_pred CccccCCCCCcHHHHHHHHhccccCCCeEEEEccCcccchhhcccCcHHHH--------HHHhCChhhHHHHHHHHhcCc
Q 027185 1 MGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDEC--------LRKYGNANIWKIFTDLFDYFP 72 (227)
Q Consensus 1 LGDyVDRG~~s~evl~~l~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~--------~~~~g~~~~~~~~~~~f~~LP 72 (227)
||||||||++|.|++.+++.++.. |.++++|+||||.+.++...++..+. ...+....++..+.+++..||
T Consensus 31 lGD~vdrg~~~~~~l~~l~~~~~~-~~~~~~l~GNHe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp 109 (225)
T cd00144 31 LGDYVDRGPDSVEVIDLLLALKIL-PDNVILLRGNHEDMLLNFLYGFYDEDEWIGGTLRLLKKLGEDLWEEFNDVFFYLP 109 (225)
T ss_pred ECCEeCCCCCcHHHHHHHHHhcCC-CCcEEEEccCchhhhhhhhcCCcchhhccchhHHHHHhhCHHHHHHHHHHHHhCc
Confidence 699999999999999999999877 88999999999999987766554332 122334567888999999999
Q ss_pred cceeecC-eEEEEeCCCCCCccccccccccccccccCCCCCccccccCCCCCCCCC-CcCCCCCeeeeCHHHHHHHHhhC
Q 027185 73 LTALVES-EIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGW-GISPRGAGYTFGQDISEQFNHTN 150 (227)
Q Consensus 73 la~~i~~-~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~~-~~~~rg~g~~fG~~~~~~fl~~~ 150 (227)
+++.++. +++|||||++|.....++.. ..+.+....+++|+||.....+ ..+.++. |+++++.|++.+
T Consensus 110 ~~~~~~~~~~~~vHag~~~~~~~~~~~~------~~~~~~~~~~~lw~r~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 179 (225)
T cd00144 110 LAALIETKKVLCVHGGLSPGLPLEEQIK------EEPEDQLPEDLLWSDPLELPGGFGSSRRGG----GPDAVEWFLKKN 179 (225)
T ss_pred HheEeCCCeEEEEeCCCCCccchHHhhh------cCcccccceeeeecCCCCCCCCCcCCCCCC----CHHHHHHHHHHC
Confidence 9999986 89999999998865544432 2233446789999999743322 2233333 999999999999
Q ss_pred CceEEEecccccccceeEecCCeEEEEEcCCCCCCCCCCeEEEEE
Q 027185 151 NLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILE 195 (227)
Q Consensus 151 ~~~~iiRgH~~~~~G~~~~~~~~~iTifSa~~y~~~~~N~~avl~ 195 (227)
+.+.|||||+++..|+.....++++||+|++.|++..+|..+++.
T Consensus 180 ~~~~ii~GHt~~~~~~~~~~~~~~i~IDtg~~~~~~~~~~l~~~~ 224 (225)
T cd00144 180 GLKLIVRGHTPVEEGYEFGHDGNLITIDSGCNYCGGGGNKLAALV 224 (225)
T ss_pred CCeEEEEcCccccCccEEcCCCCEEEEecCCcccCCCCccEEEEe
Confidence 999999999999999876778999999999999877777777653
No 20
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=99.82 E-value=4e-20 Score=153.42 Aligned_cols=146 Identities=21% Similarity=0.236 Sum_probs=102.7
Q ss_pred CccccCCCCCcHHHHHHHHhccccC---CCeEEEEccCcccchhhcccCcH--HHHHHHhC----Chhh---HHHHHHHH
Q 027185 1 MGDYVDRGYYSVETVTLLVALKVRY---PQRITILRGNHESRQITQVYGFY--DECLRKYG----NANI---WKIFTDLF 68 (227)
Q Consensus 1 LGDyVDRG~~s~evl~~l~~lk~~~---p~~v~lLrGNHE~~~~~~~~gf~--~e~~~~~g----~~~~---~~~~~~~f 68 (227)
+||+||||+++.||+.+|++|+... +.++++|+||||.+.++..+.+. ........ .... -..+.+|+
T Consensus 39 lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 118 (208)
T cd07425 39 LGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHELMNLCGDFRYVHPKYFNEFGGLAMRRRELFSPGGELGRWL 118 (208)
T ss_pred ECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcHHHHcchhccCChhHHHHHHhhhhhHHHhcCCccHHHHHH
Confidence 6999999999999999999997543 46799999999999987543322 11111110 0111 13457999
Q ss_pred hcCccceeecCeEEEEeCCCCCCccccccccccccccccCCCCCccccccCCCCCCCCCCcCCCCCeeeeCHHHHHHHHh
Q 027185 69 DYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNH 148 (227)
Q Consensus 69 ~~LPla~~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~~~~~~rg~g~~fG~~~~~~fl~ 148 (227)
+.+|+...++ ++++||||++| +|++.- ....... .-+...+.++++
T Consensus 119 ~~lP~~~~~~-~~~fvHag~~~--------------------------~w~r~y----~~~~~~~---~~~~~~~~~~l~ 164 (208)
T cd07425 119 RSKPVIVKVN-DTLFVHGGLGP--------------------------LWYRGY----SKETSDK---ECAAAHLDKVLE 164 (208)
T ss_pred HhCCeEEEEC-CEEEEeCCcHH--------------------------HHhhHh----hhhhhhc---cchHHHHHHHHH
Confidence 9999998876 59999999832 343210 0000000 002256788999
Q ss_pred hCCceEEEecccccccceeEecCCeEEEEEcC
Q 027185 149 TNNLKLIARAHQLVMDGFNWAHEQKVVTIFSA 180 (227)
Q Consensus 149 ~~~~~~iiRgH~~~~~G~~~~~~~~~iTifSa 180 (227)
.++.++||+|||+++.|....+++++++|-+.
T Consensus 165 ~~~~~~iv~GHTh~~~~~~~~~~g~~i~ID~g 196 (208)
T cd07425 165 RLGAKRMVVGHTPQEGGIVTFCGGKVIRIDVG 196 (208)
T ss_pred HcCCCeEEEcCeeeecCceEEECCEEEEEeCC
Confidence 99999999999999988766889999999974
No 21
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=99.81 E-value=4.1e-19 Score=150.86 Aligned_cols=90 Identities=21% Similarity=0.371 Sum_probs=70.2
Q ss_pred CccccCCCCCcHHHHHHHHhccccCCCeEEEEccCcccchhhcccC-------cHHHHHHHhCC------hhhHHHHHHH
Q 027185 1 MGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYG-------FYDECLRKYGN------ANIWKIFTDL 67 (227)
Q Consensus 1 LGDyVDRG~~s~evl~~l~~lk~~~p~~v~lLrGNHE~~~~~~~~g-------f~~e~~~~~g~------~~~~~~~~~~ 67 (227)
|||||||||+|+|||.+++.+. .+.++++||||||.++++...+ ...++.+.|.. ..+.+.+.++
T Consensus 43 lGDliDRGp~S~~vl~~~~~~~--~~~~~~~l~GNHE~~~l~~~~~~~~~~~~gg~~tl~~~~~~~~~~~~~~~~~~~~~ 120 (245)
T PRK13625 43 VGDLTDRGPHSLRMIEIVWELV--EKKAAYYVPGNHCNKLYRFFLGRNVTIAHGLETTVAEYEALPSHKQNMIKEKFITL 120 (245)
T ss_pred ECcccCCCcChHHHHHHHHHHh--hCCCEEEEeCccHHHHHHHHhCCCccccchhHhHHHHHhccChhhHHHHHHHHHHH
Confidence 7999999999999999999885 3458999999999998765322 12344455531 2466788999
Q ss_pred HhcCccceeec-CeEEEEeCCCCCCc
Q 027185 68 FDYFPLTALVE-SEIFCLHGGLSPSI 92 (227)
Q Consensus 68 f~~LPla~~i~-~~~l~vHgGi~p~~ 92 (227)
+++||++..++ ++++|||||+.|..
T Consensus 121 ~~~lPl~~~~~~~~~~~vHAG~~~~~ 146 (245)
T PRK13625 121 YEQAPLYHILDEGRLVVAHAGIRQDY 146 (245)
T ss_pred HHhCCceEEEeCCCEEEEECCCChHh
Confidence 99999998774 57999999998763
No 22
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=99.77 E-value=2.7e-18 Score=147.59 Aligned_cols=157 Identities=17% Similarity=0.260 Sum_probs=106.5
Q ss_pred CccccCCCCCcHHHHHHHHhccccCCC-eEEEEccCcccchhhcccC---------c-----------------------
Q 027185 1 MGDYVDRGYYSVETVTLLVALKVRYPQ-RITILRGNHESRQITQVYG---------F----------------------- 47 (227)
Q Consensus 1 LGDyVDRG~~s~evl~~l~~lk~~~p~-~v~lLrGNHE~~~~~~~~g---------f----------------------- 47 (227)
|||||||||+|.||+.+|++++..+|. ++++|+||||.+++..... |
T Consensus 41 LGDyVDRGPdS~eVld~L~~l~~~~~~~~vv~LrGNHE~~~l~fL~~~p~~~d~~~f~~~w~~~~~~~e~~~~~~~~~~~ 120 (304)
T cd07421 41 LGDYCDRGPETRKVIDFLISLPEKHPKQRHVFLCGNHDFAFAAFLGVLPRPSDGSEFKSTWKEYEKNEEREGWYKGEGFE 120 (304)
T ss_pred eCCcCCCCCCHHHHHHHHHHhhhcccccceEEEecCChHHHHhHhhcCCCccchhhhhhhhccccccccccccccccccc
Confidence 799999999999999999999988875 6889999999887532210 0
Q ss_pred -------------------------------HHHHHHHhCC--------hhhHHHHHHHHhcCccceeecCeE-------
Q 027185 48 -------------------------------YDECLRKYGN--------ANIWKIFTDLFDYFPLTALVESEI------- 81 (227)
Q Consensus 48 -------------------------------~~e~~~~~g~--------~~~~~~~~~~f~~LPla~~i~~~~------- 81 (227)
..+++++||- ..+...+.+|++.||+....+ .+
T Consensus 121 ~~h~~g~~W~~~~~~~~~~~~~~~~~~~~~gg~~Tl~SYGv~~~~~~l~~avP~~H~~fl~~l~~~~~~~-~~~~~~~~g 199 (304)
T cd07421 121 NMHLQGRRWAGKMKVTFNTVRGEPYKGSIYDARPTFESYGVPHGSSDLIKAVPEEHKKFLRNLVWVHEED-DVCIETEEG 199 (304)
T ss_pred cccccccchhhhccccccccccccccccccCcHHHHHHcCCCcchHHHHHhCCHHHHHHHHhCCceEEeC-ccccccccc
Confidence 1456677762 244567899999999997755 35
Q ss_pred ------EEEeCCCCCCccccccccccc-cccccCCCCCccccccCCCCCCCCCCcCCCCCeeeeCHHHHHHHHhhCCceE
Q 027185 82 ------FCLHGGLSPSIETLDNIRNFD-RVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKL 154 (227)
Q Consensus 82 ------l~vHgGi~p~~~~~~~i~~i~-r~~~~~~~~~~~dllWsdP~~~~~~~~~~rg~g~~fG~~~~~~fl~~~~~~~ 154 (227)
+|||||+.|..+..+|.+.+. +....|. .++||.+.. |...++.. ...-.+
T Consensus 200 ~~~~~lifVHAGlrPg~pLe~Q~~~L~~~d~~~p~----~~~l~~R~~----f~~~~~~~--------------~~~~~~ 257 (304)
T cd07421 200 LKHCKLIAVHAGLEKSNSVEEQLKLLRTKDTSIPK----IAPLSGRKN----VWNIPQEL--------------ADKKTI 257 (304)
T ss_pred ccccceEEEEcccCCCCChHHhhhhhhcccccccc----ccccccchh----hhcCcccc--------------cCCCeE
Confidence 999999999988777766533 2222222 378998653 21222111 001267
Q ss_pred EEecccccccceeEecCCeEEEEEcCCCCCC
Q 027185 155 IARAHQLVMDGFNWAHEQKVVTIFSAPNYCY 185 (227)
Q Consensus 155 iiRgH~~~~~G~~~~~~~~~iTifSa~~y~~ 185 (227)
||.||+. +....+.-|.|=+...|.+
T Consensus 258 VVhGHt~-----~~~~~~~Ri~iDtGa~~~~ 283 (304)
T cd07421 258 VVSGHHG-----KLHIDGLRLIIDEGGGFDD 283 (304)
T ss_pred EEECCCC-----CceecCCEEEEECCCCcCC
Confidence 8889982 2444555666767666644
No 23
>PHA02239 putative protein phosphatase
Probab=99.76 E-value=2.2e-18 Score=145.41 Aligned_cols=105 Identities=24% Similarity=0.352 Sum_probs=76.1
Q ss_pred CccccCCCCCcHHHHHHHHhccccCCCeEEEEccCcccchhhcccC--------------cHHHHHHHhCCh--------
Q 027185 1 MGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYG--------------FYDECLRKYGNA-------- 58 (227)
Q Consensus 1 LGDyVDRG~~s~evl~~l~~lk~~~p~~v~lLrGNHE~~~~~~~~g--------------f~~e~~~~~g~~-------- 58 (227)
||||||||++|.||+..++.+.. .+.++++|+||||.++++...+ ...+++.+||..
T Consensus 36 lGD~iDrG~~s~~v~~~l~~~~~-~~~~~~~l~GNHE~~~l~~~~~~~~~~~~~~~wl~~GG~~Tl~Syg~~~~~~~~~~ 114 (235)
T PHA02239 36 LGDYVDRGKRSKDVVNYIFDLMS-NDDNVVTLLGNHDDEFYNIMENVDRLSIYDIEWLSRYCIETLNSYGVSTVTLKYSS 114 (235)
T ss_pred ecCcCCCCCChHHHHHHHHHHhh-cCCCeEEEECCcHHHHHHHHhCchhcccchHHHHHcCCHHHHHHcCCCCccchhhH
Confidence 79999999999999999998753 3458999999999997653211 013555667521
Q ss_pred ----------------------hhHHHHHHHHhcCccceeecCeEEEEeCCCCCCccccccccccccccccCCCCCcccc
Q 027185 59 ----------------------NIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDL 116 (227)
Q Consensus 59 ----------------------~~~~~~~~~f~~LPla~~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dl 116 (227)
..+..+.+|++.||++...+ +++|||||+.|..+..+| ...++
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~lp~~~~~~-~~ifVHAGi~p~~~~~~q--------------~~~~l 179 (235)
T PHA02239 115 VEENLRNNYDFIKSELKKLKESDDYRKFKILMVNCRKYYKED-KYIFSHSGGVSWKPVEEQ--------------TIDQL 179 (235)
T ss_pred HHHHHHHhhhhhhhhhhhcccchhhHHHHHHHHhCcceEEEC-CEEEEeCCCCCCCChhhC--------------CHhHe
Confidence 12345667999999998765 699999999887442222 34689
Q ss_pred ccCCC
Q 027185 117 LWSDP 121 (227)
Q Consensus 117 lWsdP 121 (227)
+|.+.
T Consensus 180 lWiR~ 184 (235)
T PHA02239 180 IWSRD 184 (235)
T ss_pred EEecc
Confidence 99954
No 24
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=99.74 E-value=6e-18 Score=141.76 Aligned_cols=86 Identities=20% Similarity=0.262 Sum_probs=66.5
Q ss_pred CccccCCCCCcHHHHHHHHhccccCCCeEEEEccCcccchhhcccC------------c-----HHHHHHHhC-ChhhHH
Q 027185 1 MGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYG------------F-----YDECLRKYG-NANIWK 62 (227)
Q Consensus 1 LGDyVDRG~~s~evl~~l~~lk~~~p~~v~lLrGNHE~~~~~~~~g------------f-----~~e~~~~~g-~~~~~~ 62 (227)
|||||||||+|.|||.+|+.++. +.++++|+||||.+++....+ . ..++.+.++ ..+.++
T Consensus 40 lGD~IDRGp~S~~vl~~l~~l~~--~~~~~~l~GNHE~~ll~~~~~~~~~~~w~~~~~~~~~~~~~~~l~~~~~~~~~~~ 117 (222)
T cd07413 40 LGDLIDRGPEIRELLEIVKSMVD--AGHALAVMGNHEFNAIAWHTKDPSGGEWLRAHSKKNLRQHQAFLEQFREHSEEHK 117 (222)
T ss_pred eCcccCCCCCHHHHHHHHHHhhc--CCCEEEEEccCcHHHHHhhhCCcccchhhhcCCCcccccHHHHHHHHhccchhHH
Confidence 79999999999999999999864 347999999999998753211 0 123444443 235668
Q ss_pred HHHHHHhcCccceeecCeEEEEeCCCC
Q 027185 63 IFTDLFDYFPLTALVESEIFCLHGGLS 89 (227)
Q Consensus 63 ~~~~~f~~LPla~~i~~~~l~vHgGi~ 89 (227)
.+.+||+.||++...+ +++|||||+.
T Consensus 118 ~~~~~l~~lP~~~~~~-~~~~VHAg~~ 143 (222)
T cd07413 118 DWLEWFKTLPLFLDLG-GVRVVHACWD 143 (222)
T ss_pred HHHHHHhcCCcEEEEC-CEEEEECCcC
Confidence 8999999999998764 6999999985
No 25
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=99.72 E-value=1.1e-17 Score=141.17 Aligned_cols=88 Identities=19% Similarity=0.435 Sum_probs=68.6
Q ss_pred CccccCCCCCcHHHHHHHHhccccCCCeEEEEccCcccchhhccc--------CcHHHHHHHhC--ChhhHHHHHHHHhc
Q 027185 1 MGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVY--------GFYDECLRKYG--NANIWKIFTDLFDY 70 (227)
Q Consensus 1 LGDyVDRG~~s~evl~~l~~lk~~~p~~v~lLrGNHE~~~~~~~~--------gf~~e~~~~~g--~~~~~~~~~~~f~~ 70 (227)
|||||||||+|.|||.+|++++.. .++++||||||.++++... |+ .++...+. ...+.+.+.++|+.
T Consensus 44 lGDlIDrG~~s~evl~~l~~l~~~--~~~~~v~GNHE~~l~~~~~~~~~~~~~~~-~~t~~~~~~~~~~~~~~~~~~l~~ 120 (234)
T cd07423 44 VGDLVDRGPDSPEVLRLVMSMVAA--GAALCVPGNHDNKLYRKLQGRNVKITHGL-EETVAQLEAESEEFKEEVIEFYES 120 (234)
T ss_pred ECCccCCCCCHHHHHHHHHHHhhC--CcEEEEECCcHHHHHHHhcCCCccccCcc-cchHHHHhhccHHHHHHHHHHHHh
Confidence 799999999999999999988643 4799999999998876432 22 23334442 24566788999999
Q ss_pred Cccceeec-CeEEEEeCCCCCC
Q 027185 71 FPLTALVE-SEIFCLHGGLSPS 91 (227)
Q Consensus 71 LPla~~i~-~~~l~vHgGi~p~ 91 (227)
||++..++ ++++|||||+++.
T Consensus 121 lP~~~~~~~~~~~~vHag~~~~ 142 (234)
T cd07423 121 LPSHLVLDEGKLVVAHAGIKEE 142 (234)
T ss_pred CCcEEEeCCCcEEEEeCCCChH
Confidence 99998775 4799999998764
No 26
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=99.69 E-value=1.7e-16 Score=136.73 Aligned_cols=88 Identities=24% Similarity=0.349 Sum_probs=68.4
Q ss_pred CccccCCCCCcHHHHHHHHhccccCCCeEEEEccCcccchhhcccCcH----HHHHHHhCChhhHHHHHHHHhcCcccee
Q 027185 1 MGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFY----DECLRKYGNANIWKIFTDLFDYFPLTAL 76 (227)
Q Consensus 1 LGDyVDRG~~s~evl~~l~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~----~e~~~~~g~~~~~~~~~~~f~~LPla~~ 76 (227)
|||||||||+|+||+.+++.+. .++++|+||||.+++...+|.. .+....+-.....+.+.++++++|++..
T Consensus 35 lGDlVdrGp~s~~vl~~l~~l~----~~~~~VlGNHD~~ll~~~~g~~~~~~~~~l~~~l~~~~~~~~~~~L~~lPl~~~ 110 (275)
T PRK00166 35 VGDLVNRGPDSLEVLRFVKSLG----DSAVTVLGNHDLHLLAVAAGIKRNKKKDTLDPILEAPDRDELLDWLRHQPLLHV 110 (275)
T ss_pred eCCccCCCcCHHHHHHHHHhcC----CCeEEEecChhHHHHHhhcCCccccchhHHHHHHccccHHHHHHHHHCCCcEEE
Confidence 7999999999999999999873 3799999999999887665532 1222222123345678899999999887
Q ss_pred e-cCeEEEEeCCCCCCc
Q 027185 77 V-ESEIFCLHGGLSPSI 92 (227)
Q Consensus 77 i-~~~~l~vHgGi~p~~ 92 (227)
+ ++++++||||++|..
T Consensus 111 ~~~~~~l~vHAGi~p~~ 127 (275)
T PRK00166 111 DEELGLVMVHAGIPPQW 127 (275)
T ss_pred ECCCCEEEEccCCCCCC
Confidence 6 567999999999874
No 27
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=99.69 E-value=6.4e-17 Score=133.99 Aligned_cols=110 Identities=23% Similarity=0.337 Sum_probs=74.3
Q ss_pred CccccCCCCCcHHHHHHHHhccccCCCeEEEEccCcccchhhcccC--cHHHHHHHhCC--------hhhHHHHHHHHhc
Q 027185 1 MGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYG--FYDECLRKYGN--------ANIWKIFTDLFDY 70 (227)
Q Consensus 1 LGDyVDRG~~s~evl~~l~~lk~~~p~~v~lLrGNHE~~~~~~~~g--f~~e~~~~~g~--------~~~~~~~~~~f~~ 70 (227)
+|||||||+++.|++.+|.. .++++++||||.+.+....+ ...+.+.+.+. ..+++...++|+.
T Consensus 35 ~GD~v~~g~~~~~~~~~l~~------~~~~~v~GNhe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 108 (207)
T cd07424 35 VGDLIDRGPESLACLELLLE------PWFHAVRGNHEQMAIDALRAEPLDAVRWLANGGEWFLDLPDEELRRWLALKLEQ 108 (207)
T ss_pred eCCcccCCCCHHHHHHHHhc------CCEEEeECCChHHHHhHhhCCCcchhHHHhcCCeehhhcChHHHHHHHHHHHHh
Confidence 69999999999999999864 26899999999998876543 22233333332 1245668899999
Q ss_pred Cccceeec---CeEEEEeCCCCCCccccccccccccccccCCCCCccccccCCCC
Q 027185 71 FPLTALVE---SEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPD 122 (227)
Q Consensus 71 LPla~~i~---~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdP~ 122 (227)
||++..++ .++++||||+++... ...+. + +...+....+++|++|.
T Consensus 109 lP~~~~i~~~g~~~~~vHag~~~~~~-~~~~~---~--~~~~~~~~~~~~w~~~~ 157 (207)
T cd07424 109 LPLAIEVETEGGKVGIVHADYPSDDW-SDGVG---A--VTLRPEDIEELLWSRTR 157 (207)
T ss_pred CCeEEEEEeCCCEEEEECCCCCcchh-hhhhh---c--cccCcccceeeeeccch
Confidence 99998774 479999999865421 11000 0 01112245678998764
No 28
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=99.69 E-value=6.3e-17 Score=135.18 Aligned_cols=83 Identities=22% Similarity=0.296 Sum_probs=59.5
Q ss_pred CccccCCCCCcHHHHHHHHhccccCCCeEEEEccCcccchhhcccCcHHHHHHHhC----------ChhhHHHHHHHHhc
Q 027185 1 MGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYG----------NANIWKIFTDLFDY 70 (227)
Q Consensus 1 LGDyVDRG~~s~evl~~l~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~g----------~~~~~~~~~~~f~~ 70 (227)
|||+|||||+|.|||.+|.. .++++|+||||.++++...+-........| ....+..+.++++.
T Consensus 51 lGDlvDrGp~s~~vl~~l~~------~~~~~v~GNHE~~~l~~~~~~~~~~w~~~gg~~~~~l~~~~~~~~~~~~~~l~~ 124 (218)
T PRK11439 51 VGDLIDRGPQSLRCLQLLEE------HWVRAVRGNHEQMALDALASQQMSLWLMNGGDWFIALTDNQQKQAKTLLEKCQR 124 (218)
T ss_pred cCcccCCCcCHHHHHHHHHc------CCceEeeCchHHHHHHHHHCCccchhhhCCChhhhhcchhhhHHHHHHHHHHhc
Confidence 79999999999999999864 257899999999988643221101111111 12345667799999
Q ss_pred Cccceeec---CeEEEEeCCCC
Q 027185 71 FPLTALVE---SEIFCLHGGLS 89 (227)
Q Consensus 71 LPla~~i~---~~~l~vHgGi~ 89 (227)
||+...+. +++++||||++
T Consensus 125 LP~~~~~~~~~~~~~~vHAg~p 146 (218)
T PRK11439 125 LPFILEVHCRTGKHVIAHADYP 146 (218)
T ss_pred CCcEEEeeccCCCEEEEeCCCC
Confidence 99997653 46999999984
No 29
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=99.66 E-value=1.4e-16 Score=135.91 Aligned_cols=88 Identities=26% Similarity=0.363 Sum_probs=69.2
Q ss_pred CccccCCCCCcHHHHHHHHhccccCCCeEEEEccCcccchhhcccCcH----HHHHHHhCChhhHHHHHHHHhcCcccee
Q 027185 1 MGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFY----DECLRKYGNANIWKIFTDLFDYFPLTAL 76 (227)
Q Consensus 1 LGDyVDRG~~s~evl~~l~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~----~e~~~~~g~~~~~~~~~~~f~~LPla~~ 76 (227)
|||||||||+|+|||.+|++++ .++++++||||.++++..+++. .+....+-.....+.+.+|++++|++..
T Consensus 33 lGDlVdRGp~s~evl~~l~~l~----~~v~~VlGNHD~~ll~~~~g~~~~~~~~t~~~~l~~~~~~~~~~wLr~lPl~~~ 108 (257)
T cd07422 33 VGDLVNRGPDSLETLRFVKSLG----DSAKTVLGNHDLHLLAVAAGIKKPKKKDTLDDILNAPDRDELLDWLRHQPLLHR 108 (257)
T ss_pred ecCcCCCCcCHHHHHHHHHhcC----CCeEEEcCCchHHHHHHhcCccccccHhHHHHHHhccchHHHHHHHHhCCCEEE
Confidence 7999999999999999999886 3799999999999887655532 1222222123344678999999999988
Q ss_pred ecC-eEEEEeCCCCCCc
Q 027185 77 VES-EIFCLHGGLSPSI 92 (227)
Q Consensus 77 i~~-~~l~vHgGi~p~~ 92 (227)
+++ ++++||||++|..
T Consensus 109 ~~~~~~l~vHAGi~p~w 125 (257)
T cd07422 109 DPELGILMVHAGIPPQW 125 (257)
T ss_pred ECCccEEEEccCCCCCC
Confidence 764 7999999999874
No 30
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=99.62 E-value=9.8e-16 Score=131.42 Aligned_cols=91 Identities=23% Similarity=0.320 Sum_probs=70.8
Q ss_pred CccccCCCCCcHHHHHHHHhccccCCCeEEEEccCcccchhhcccCcH-----HHHHHHhCChhhHHHHHHHHhcCccce
Q 027185 1 MGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFY-----DECLRKYGNANIWKIFTDLFDYFPLTA 75 (227)
Q Consensus 1 LGDyVDRG~~s~evl~~l~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~-----~e~~~~~g~~~~~~~~~~~f~~LPla~ 75 (227)
|||+|||||+|+|||.++.++. +++++|+||||.++++..+|+. +.....+ .....+.+.+|++.+|+..
T Consensus 35 lGDlVdRGP~slevL~~l~~l~----~~~~~VlGNHD~~lL~~~~g~~~~~~~d~l~~~l-~a~~~~ell~wLr~lPl~i 109 (279)
T TIGR00668 35 TGDLVARGPGSLEVLRYVKSLG----DAVRLVLGNHDLHLLAVFAGISRNKPKDRLDPLL-EAPDADELLNWLRRQPLLQ 109 (279)
T ss_pred eCCccCCCCCHHHHHHHHHhcC----CCeEEEEChhHHHHHHHhcCCCccCchHHHHHHH-HccCHHHHHHHHHcCCcEE
Confidence 7999999999999999998874 3688999999999988777652 2222222 3345677899999999987
Q ss_pred eec-CeEEEEeCCCCCCcccccc
Q 027185 76 LVE-SEIFCLHGGLSPSIETLDN 97 (227)
Q Consensus 76 ~i~-~~~l~vHgGi~p~~~~~~~ 97 (227)
... .++++||||++|.. ++++
T Consensus 110 ~~~~~~~~lVHAGi~P~w-~l~~ 131 (279)
T TIGR00668 110 HDEEKKLVMAHAGITPQW-DLQT 131 (279)
T ss_pred EeCCCCEEEEecCCCCCC-cHHH
Confidence 654 36999999999974 3444
No 31
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=99.56 E-value=6.1e-15 Score=123.22 Aligned_cols=83 Identities=18% Similarity=0.205 Sum_probs=57.6
Q ss_pred CccccCCCCCcHHHHHHHHhccccCCCeEEEEccCcccchhhcccCcHHHH--------HHHhCC--hhhHHHHHHHHhc
Q 027185 1 MGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDEC--------LRKYGN--ANIWKIFTDLFDY 70 (227)
Q Consensus 1 LGDyVDRG~~s~evl~~l~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~--------~~~~g~--~~~~~~~~~~f~~ 70 (227)
|||||||||+|.||+.+|.+ .+++.||||||.+++.....-.... ...... ........++++.
T Consensus 49 lGD~vdrG~~~~~~l~~l~~------~~~~~v~GNHE~~~~~~~~~~~~~~~~~~gg~~~~~l~~~~~~~~~~~~~~L~~ 122 (218)
T PRK09968 49 VGDNIDRGPESLNVLRLLNQ------PWFISVKGNHEAMALDAFETGDGNMWLASGGDWFFDLNDSEQQEATDLLLKFHH 122 (218)
T ss_pred CCCCcCCCcCHHHHHHHHhh------CCcEEEECchHHHHHHHHhcCChhHHHHccCHHHhcCCHHHHHHHHHHHHHHhc
Confidence 79999999999999999853 2688999999999886432100011 111111 1233445678999
Q ss_pred Cccceeec---CeEEEEeCCCC
Q 027185 71 FPLTALVE---SEIFCLHGGLS 89 (227)
Q Consensus 71 LPla~~i~---~~~l~vHgGi~ 89 (227)
||++..+. .++++||||++
T Consensus 123 LP~~~~~~~~g~~~~~vHAg~p 144 (218)
T PRK09968 123 LPHIIEITNDNIKYVIAHADYP 144 (218)
T ss_pred CCeEEEEeeCCCcEEEEeCCCC
Confidence 99998763 46899999984
No 32
>COG0639 ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms]
Probab=99.21 E-value=2.4e-11 Score=93.35 Aligned_cols=143 Identities=46% Similarity=0.780 Sum_probs=117.0
Q ss_pred hhcccCcHHHHHHHhCChhhHHH---HHHHHhcCccceeecC-eEEEEeCCCCCCc-ccccccccccccc--ccCCCCCc
Q 027185 41 ITQVYGFYDECLRKYGNANIWKI---FTDLFDYFPLTALVES-EIFCLHGGLSPSI-ETLDNIRNFDRVQ--EVPHEGPM 113 (227)
Q Consensus 41 ~~~~~gf~~e~~~~~g~~~~~~~---~~~~f~~LPla~~i~~-~~l~vHgGi~p~~-~~~~~i~~i~r~~--~~~~~~~~ 113 (227)
+...+++.+++...++....|.. ..++|+.||+.+.+.. .++|.|+++++.. ...++++.+.|.. .+...+..
T Consensus 3 l~~~~~~~~~~~~~~~~~~~w~~~~g~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~ 82 (155)
T COG0639 3 LTALYGFYDEKLRKYGEELEWLRAAGGLETFDSLPLAAVAEGGKLLCHHGGLSPGLDRLLDIIEVLDRLRACEVPHAGHT 82 (155)
T ss_pred hhhhhchhHHhhhhcCCceeeeeccchhhHHHhhhHHHHhcCCceeeecCCCCcchhhhHHHHHHHhhhhcccCCCcccc
Confidence 44567777887777754435666 9999999999999888 8999999999865 5667777777765 56666777
Q ss_pred cccccCCCCC--CCCCCcCCCCCeeeeCHHHHHHHHhhCCceEEEecccccccceeEecCCeEEEEEcCCCCC
Q 027185 114 CDLLWSDPDD--RCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYC 184 (227)
Q Consensus 114 ~dllWsdP~~--~~~~~~~~rg~g~~fG~~~~~~fl~~~~~~~iiRgH~~~~~G~~~~~~~~~iTifSa~~y~ 184 (227)
.+.+|++|.. ...|.++++|.+..+ ++.+..|+..+..+.+.++|+....++...+.+..+|.||+++|+
T Consensus 83 ~~~~~~~~~~~~~~~w~~~~~g~~~~~-~~~~~~f~~~~~~~~~~~~~~~~~~d~~~~~~~~~lt~~~~~~~~ 154 (155)
T COG0639 83 HDLLWSDPDGGDRRIWNPGPRGVPRDG-GDVTAVFGIVHTPKLIERAHVLYDIDTGAVFGGGLLTAFSAPNYC 154 (155)
T ss_pred ccccCCCCCCCcccccccCCCCCCccc-cchhhHHhhhcccceEEEEeEEEecCceEEeCCCeeeEEeccccc
Confidence 7779999884 688999999998777 788889998887777999999999999988776899999999986
No 33
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=98.52 E-value=3e-07 Score=70.43 Aligned_cols=127 Identities=18% Similarity=0.152 Sum_probs=75.1
Q ss_pred CccccCCCCCcHHHHHHH--HhccccCCCeEEEEccCcccchhhcccCcHHHHHHH------------------------
Q 027185 1 MGDYVDRGYYSVETVTLL--VALKVRYPQRITILRGNHESRQITQVYGFYDECLRK------------------------ 54 (227)
Q Consensus 1 LGDyVDRG~~s~evl~~l--~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~------------------------ 54 (227)
+||++|+|..+.+..... ...+...+..+++++||||.................
T Consensus 38 ~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (200)
T PF00149_consen 38 LGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFILGNHDYYSGNSFYGFYDYQFEDYYGNYNYYYSYFNNKVIFDNDNFW 117 (200)
T ss_dssp ESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEEE-TTSSHHHHHHHHHHHHHHSSEEECSSEEECTESSEEEEEETTEE
T ss_pred eccccccccccccchhhhccchhhhhccccccccccccccceeccccccccccccccccccccccccCcceeeecccccc
Confidence 599999999998877754 333344456799999999998754332211111100
Q ss_pred ---------hCChhhHHHHHHHHhcCccceeecCeEEEEeCCCCCCccccccccccccccccCCCCCccccccCCCCCCC
Q 027185 55 ---------YGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRC 125 (227)
Q Consensus 55 ---------~g~~~~~~~~~~~f~~LPla~~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdP~~~~ 125 (227)
............+......+......++++|.++.+......+.
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~H~p~~~~~~~~~~~--------------------------- 170 (200)
T PF00149_consen 118 FNSGNNEYPDYGMEAQQEWWLWLLLLLEAKNDDPVIVFTHHPPYSSSSDSSSY--------------------------- 170 (200)
T ss_dssp EEEHCCHTHHSEHHHHHHHHHHHHHHHHEEEESEEEEEESSSSSTTSSSTHHH---------------------------
T ss_pred cccccccccccccccchhcccccccccccccccceeEEEecCCCCcccccccc---------------------------
Confidence 00011111222222222233334567999999987642211110
Q ss_pred CCCcCCCCCeeeeCHHHHHHHHhhCCceEEEeccccc
Q 027185 126 GWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLV 162 (227)
Q Consensus 126 ~~~~~~rg~g~~fG~~~~~~fl~~~~~~~iiRgH~~~ 162 (227)
.....+...+..++++.++++++.||+..
T Consensus 171 --------~~~~~~~~~~~~~~~~~~v~~~~~GH~H~ 199 (200)
T PF00149_consen 171 --------GNESKGREALEELLKKYNVDLVLSGHTHR 199 (200)
T ss_dssp --------SSEEEHHHHHHHHHHHTTCSEEEEESSSS
T ss_pred --------chhhccHHHHHHHHhhCCCCEEEeCceec
Confidence 12345778899999999999999999864
No 34
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=97.85 E-value=0.00011 Score=56.48 Aligned_cols=30 Identities=17% Similarity=-0.074 Sum_probs=26.5
Q ss_pred eCHHHHHHHHhhCCceEEEeccccccccee
Q 027185 138 FGQDISEQFNHTNNLKLIARAHQLVMDGFN 167 (227)
Q Consensus 138 fG~~~~~~fl~~~~~~~iiRgH~~~~~G~~ 167 (227)
.|.+.+.+++++.+.++++-||...+.|++
T Consensus 91 ~g~~~~~~~~~~~~~~~~i~GH~H~~~~~~ 120 (135)
T cd07379 91 VGCEELLNRVQRVRPKLHVFGHIHEGYGAE 120 (135)
T ss_pred cCCHHHHHHHHHHCCcEEEEcCcCCcCcee
Confidence 477888899999999999999999988876
No 35
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=97.78 E-value=0.0004 Score=54.23 Aligned_cols=53 Identities=28% Similarity=0.464 Sum_probs=35.8
Q ss_pred CccccCCCCCcHHHHHHHHhccccCCCeEEEEccCcccchhhcccCcHHHHHHHhCChhhHHHHHHHHhcCccceee--c
Q 027185 1 MGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALV--E 78 (227)
Q Consensus 1 LGDyVDRG~~s~evl~~l~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~f~~LPla~~i--~ 78 (227)
+||++++|+.+. ++.. ..+++++||||.... +..+|....+ +
T Consensus 31 ~GD~~~~~~~~~--------~~~~--~~~~~V~GNhD~~~~--------------------------~~~~p~~~~~~~~ 74 (155)
T cd00841 31 AGDVLYPGPLNE--------LELK--APVIAVRGNCDGEVD--------------------------FPILPEEAVLEIG 74 (155)
T ss_pred CCccccccccch--------hhcC--CcEEEEeCCCCCcCC--------------------------cccCCceEEEEEC
Confidence 699999998765 1222 359999999997532 3445544433 2
Q ss_pred -CeEEEEeCCCC
Q 027185 79 -SEIFCLHGGLS 89 (227)
Q Consensus 79 -~~~l~vHgGi~ 89 (227)
.+++++||...
T Consensus 75 g~~i~v~Hg~~~ 86 (155)
T cd00841 75 GKRIFLTHGHLY 86 (155)
T ss_pred CEEEEEECCccc
Confidence 37999998753
No 36
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=97.76 E-value=0.0022 Score=53.31 Aligned_cols=70 Identities=20% Similarity=0.199 Sum_probs=42.8
Q ss_pred CHHHHHHHHhhC-CceEEEecccccccceeEe-----cCCeEEEEEcCCCCCCCCCCeE-EEEEEeCC-CCeEEEEEec
Q 027185 139 GQDISEQFNHTN-NLKLIARAHQLVMDGFNWA-----HEQKVVTIFSAPNYCYRCGNMA-SILEVDDC-RSHTFIQFEP 209 (227)
Q Consensus 139 G~~~~~~fl~~~-~~~~iiRgH~~~~~G~~~~-----~~~~~iTifSa~~y~~~~~N~~-avl~i~~~-~~~~~~~~~~ 209 (227)
+...+.+.+++. ++++++-||.... +.... .++.+..+.+-.......+|-. .++.++++ .++.+.+|.|
T Consensus 136 ~~~~~~~ll~~~~~V~~v~~GH~H~~-~~~~~~~~~~~g~~v~~~~~~~q~~~~~g~~~~r~~~f~~~~~~i~~~tysp 213 (214)
T cd07399 136 GQQIWDKLVKKNDNVFMVLSGHVHGA-GRTTLVSVGDAGRTVHQMLADYQGEPNGGNGFLRLLEFDPDNNKIDVRTYSP 213 (214)
T ss_pred HHHHHHHHHhCCCCEEEEEccccCCC-ceEEEcccCCCCCEeeEEeecccCCCCCCcceEEEEEEecCCCEEEEEeCCC
Confidence 566777888887 8999999997653 33322 1345666654432221112221 56777766 5788888876
No 37
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=97.65 E-value=0.00037 Score=58.99 Aligned_cols=128 Identities=17% Similarity=0.202 Sum_probs=77.9
Q ss_pred CccccCCCCCcHHHHHHHHhccccCCCeEEEEccCcccchhhcc--------------------cC--------------
Q 027185 1 MGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQV--------------------YG-------------- 46 (227)
Q Consensus 1 LGDyVDRG~~s~evl~~l~~lk~~~p~~v~lLrGNHE~~~~~~~--------------------~g-------------- 46 (227)
+||++| .+.+++..|..+. + .++.++||||....... ++
T Consensus 32 ~GDi~~---~~~~~~~~l~~l~--~--p~~~V~GNHD~~~~~~~~~k~~~l~~~L~~lg~~~l~~~~~~~~~~~~~vvG~ 104 (238)
T cd07397 32 VGDFGN---ESVQLVRAISSLP--L--PKAVILGNHDAWYDATFRKKGDRVQEQLELLGDLHCGWGRLDFPPLPLSVVGG 104 (238)
T ss_pred CCCCCc---ChHHHHHHHHhCC--C--CeEEEcCCCcccccccccchHHHHHHHHHHhCCcEEeecccccCCCCeEEEee
Confidence 599976 4678777776553 3 48999999998542100 00
Q ss_pred ----------c-HHHHHHHhCChhhHHHHHHHHhcCccceeecCeEEEEeCCCCCCccccccccccccccccCCCCCccc
Q 027185 47 ----------F-YDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCD 115 (227)
Q Consensus 47 ----------f-~~e~~~~~g~~~~~~~~~~~f~~LPla~~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~d 115 (227)
+ ..++.+.||-...++.+..+++.++.+......+|+.|+++.-.. ++.+++ +-
T Consensus 105 R~~~~~g~~~~~~~~vr~~fgi~s~~eA~~~ive~~~~~~~~~~~VliaH~~~~G~g---~~~~~~------------cg 169 (238)
T cd07397 105 RPFSAGGGFWLSKKAVKAVYGVISLEESAQRIIAAAKKAPPDLPLILLAHNGPSGLG---SDAEDP------------CG 169 (238)
T ss_pred CCccCCCccccCHHHHHHHhCCCCHHHHHHHHHHHhhhcCCCCCeEEEeCcCCcCCC---cccccc------------cc
Confidence 1 125667777667778888889988744443457999999975432 221111 11
Q ss_pred cccCCCCCCCCCCcCCCCCeeeeCHHHHHHHHhhCC----ceEEEecccccc
Q 027185 116 LLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNN----LKLIARAHQLVM 163 (227)
Q Consensus 116 llWsdP~~~~~~~~~~rg~g~~fG~~~~~~fl~~~~----~~~iiRgH~~~~ 163 (227)
..|.+ .+.-+|...+.+.+++.. .++++-||-...
T Consensus 170 ---------~d~~~----~~~~~G~~~l~~ai~~~~~~~~~~l~~fGH~H~~ 208 (238)
T cd07397 170 ---------RDWKP----PGGDWGDPDLALAISQIQQGRQVPLVVFGHMHHR 208 (238)
T ss_pred ---------cccCC----cCCCCCCHHHHHHHHHHhccCCCCEEEeCCccCc
Confidence 11221 112357777766666544 788999975443
No 38
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=97.59 E-value=0.00054 Score=50.50 Aligned_cols=87 Identities=21% Similarity=0.298 Sum_probs=59.8
Q ss_pred CccccCCCCCcHHHHHHHHhccccCCCeEEEEccCcccchhhcccCcHHHHHHHhCChhhHHHHHHHHhcCccceeecCe
Q 027185 1 MGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESE 80 (227)
Q Consensus 1 LGDyVDRG~~s~evl~~l~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~f~~LPla~~i~~~ 80 (227)
+||+++.+..+.+...............++++.||||
T Consensus 33 ~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD------------------------------------------- 69 (131)
T cd00838 33 LGDLVGDGPDPEEVLAAALALLLLLGIPVYVVPGNHD------------------------------------------- 69 (131)
T ss_pred CCcccCCCCCchHHHHHHHHHhhcCCCCEEEeCCCce-------------------------------------------
Confidence 6999999998887666522222233346999999999
Q ss_pred EEEEeCCCCCCccccccccccccccccCCCCCccccccCCCCCCCCCCcCCCCCeeeeCHHHHHHHHhhCCceEEEeccc
Q 027185 81 IFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQ 160 (227)
Q Consensus 81 ~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~~~~~~rg~g~~fG~~~~~~fl~~~~~~~iiRgH~ 160 (227)
++++|..+.+....... . . ..........+...+..++|.||.
T Consensus 70 i~~~H~~~~~~~~~~~~---------------------~-----~-----------~~~~~~~~~~~~~~~~~~~~~GH~ 112 (131)
T cd00838 70 ILLTHGPPYDPLDELSP---------------------D-----E-----------DPGSEALLELLEKYGVDLVLSGHT 112 (131)
T ss_pred EEEeccCCCCCchhhcc---------------------c-----c-----------hhhHHHHHHHHHHhCCCEEEeCCe
Confidence 88899987543211100 0 0 005667778888899999999999
Q ss_pred cccccee
Q 027185 161 LVMDGFN 167 (227)
Q Consensus 161 ~~~~G~~ 167 (227)
.....+.
T Consensus 113 H~~~~~~ 119 (131)
T cd00838 113 HVYERRE 119 (131)
T ss_pred ecccccc
Confidence 8866654
No 39
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=97.47 E-value=0.00089 Score=51.81 Aligned_cols=121 Identities=21% Similarity=0.251 Sum_probs=65.8
Q ss_pred CccccCCCCCcHHHHHHHHhccccCCCeEEEEccCcccchhhcccCcHHHHHHHhCChhhHHHHHHHHhcCccceeecCe
Q 027185 1 MGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESE 80 (227)
Q Consensus 1 LGDyVDRG~~s~evl~~l~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~f~~LPla~~i~~~ 80 (227)
+||++|+ .+++..+..+ .++.++||||.......... .. +.....+. .-..+
T Consensus 32 ~GDi~~~----~~~~~~~~~~------~~~~v~GNHD~~~~~~~~~~-----------~~------~~~~~~~~-~~~~~ 83 (156)
T PF12850_consen 32 LGDIFDP----EEVLELLRDI------PVYVVRGNHDNWAFPNENDE-----------EY------LLDALRLT-IDGFK 83 (156)
T ss_dssp ES-SCSH----HHHHHHHHHH------EEEEE--CCHSTHHHSEECT-----------CS------SHSEEEEE-ETTEE
T ss_pred CCCchhH----HHHHHHHhcC------CEEEEeCCcccccchhhhhc-----------cc------cccceeee-ecCCe
Confidence 5999993 7777776443 59999999997553322110 00 11111111 11457
Q ss_pred EEEEeCCCCCCccccccccccccccccCCCCCccccccCCCCCCCCCCcCCCCCeeeeCHHHHHHHHhhCCceEEEeccc
Q 027185 81 IFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQ 160 (227)
Q Consensus 81 ~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~~~~~~rg~g~~fG~~~~~~fl~~~~~~~iiRgH~ 160 (227)
++++||..... ..+.+.+.+.+...+.++++.||.
T Consensus 84 i~~~H~~~~~~---------------------------------------------~~~~~~~~~~~~~~~~~~~~~GH~ 118 (156)
T PF12850_consen 84 ILLSHGHPYDV---------------------------------------------QWDPAELREILSRENVDLVLHGHT 118 (156)
T ss_dssp EEEESSTSSSS---------------------------------------------TTTHHHHHHHHHHTTSSEEEESSS
T ss_pred EEEECCCCccc---------------------------------------------ccChhhhhhhhcccCCCEEEcCCc
Confidence 99999975330 024555667777899999999998
Q ss_pred ccccceeEecCCeEEEEEcCCCCCCCCCCeEEEEEEe
Q 027185 161 LVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVD 197 (227)
Q Consensus 161 ~~~~G~~~~~~~~~iTifSa~~y~~~~~N~~avl~i~ 197 (227)
-.+.-.+ ..+..+++.-|....- .+...+++.++
T Consensus 119 H~~~~~~-~~~~~~~~~Gs~~~~~--~~~~~~~~i~~ 152 (156)
T PF12850_consen 119 HRPQVFK-IGGIHVINPGSIGGPR--HGDQSGYAILD 152 (156)
T ss_dssp SSEEEEE-ETTEEEEEE-GSSS-S--SSSSEEEEEEE
T ss_pred ccceEEE-ECCEEEEECCcCCCCC--CCCCCEEEEEE
Confidence 7754443 3344455555543321 22245555553
No 40
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=97.46 E-value=0.0036 Score=49.21 Aligned_cols=30 Identities=23% Similarity=0.395 Sum_probs=22.4
Q ss_pred CccccCCCCCcHHHHHHHHhccccCCCeEEEEccCcccc
Q 027185 1 MGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESR 39 (227)
Q Consensus 1 LGDyVDRG~~s~evl~~l~~lk~~~p~~v~lLrGNHE~~ 39 (227)
+||++ +.+++..+..+. ..++.++||||..
T Consensus 35 ~GD~~-----~~~~~~~l~~~~----~~~~~V~GN~D~~ 64 (158)
T TIGR00040 35 AGDLT-----SPFVLKEFEDLA----AKVIAVRGNNDGE 64 (158)
T ss_pred cCCCC-----CHHHHHHHHHhC----CceEEEccCCCch
Confidence 58988 567777776543 1489999999983
No 41
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=97.34 E-value=0.0024 Score=53.91 Aligned_cols=66 Identities=12% Similarity=0.132 Sum_probs=41.3
Q ss_pred eCHHHHHHHHhhCCceEEEecccccccceeEecCCeEEEEEcCCCCCCCCCCeEEEEEEeCCCCeEEEEEe
Q 027185 138 FGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCRSHTFIQFE 208 (227)
Q Consensus 138 fG~~~~~~fl~~~~~~~iiRgH~~~~~G~~~~~~~~~iTifSa~~y~~~~~N~~avl~i~~~~~~~~~~~~ 208 (227)
..++.+.+.+++.+.+.+|.||...+.=.....++.-++-.+-+++ ...+.++.+++++ .+++.|.
T Consensus 174 ~~~~~~~~~~~~~~~~~~i~GH~H~~~~~~~~~~~~~~~~~~lgdw----~~~~~~~~~~~~~-~~~~~~~ 239 (241)
T PRK05340 174 VNPEAVAALMEKHGVDTLIHGHTHRPAIHQLQAGGQPATRIVLGDW----HEQGSVLKVDADG-VELIPFP 239 (241)
T ss_pred CCHHHHHHHHHHhCCCEEEECcccCcceeeccCCCcceEEEEeCCC----CCCCeEEEEECCc-eEEEeCC
Confidence 3567788889999999999999977644443333321233333333 1236788887754 6666553
No 42
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=97.33 E-value=0.0027 Score=48.79 Aligned_cols=30 Identities=13% Similarity=0.011 Sum_probs=24.5
Q ss_pred CHHHHHHHHhhCCceEEEecccccccceeE
Q 027185 139 GQDISEQFNHTNNLKLIARAHQLVMDGFNW 168 (227)
Q Consensus 139 G~~~~~~fl~~~~~~~iiRgH~~~~~G~~~ 168 (227)
+.+.+.+.+++.+.++++.||.-.+..+.+
T Consensus 101 ~~~~~~~~l~~~~~~~~l~GH~H~~~~~~~ 130 (144)
T cd07400 101 DAGDALKLLAEAGVDLVLHGHKHVPYVGNI 130 (144)
T ss_pred CHHHHHHHHHHcCCCEEEECCCCCcCeeec
Confidence 566788889999999999999988665543
No 43
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=97.23 E-value=0.019 Score=46.43 Aligned_cols=30 Identities=27% Similarity=0.554 Sum_probs=22.6
Q ss_pred CccccCCCCCcHHHHHHHHhccccCCCeEEEEccCcccc
Q 027185 1 MGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESR 39 (227)
Q Consensus 1 LGDyVDRG~~s~evl~~l~~lk~~~p~~v~lLrGNHE~~ 39 (227)
+||+++ .+++.++..++ + .++.++||||..
T Consensus 36 ~GDi~~-----~~~~~~l~~~~---~-~~~~V~GN~D~~ 65 (178)
T cd07394 36 TGNLCS-----KETYDYLKTIA---P-DVHIVRGDFDEN 65 (178)
T ss_pred CCCCCC-----HHHHHHHHhhC---C-ceEEEECCCCcc
Confidence 688876 77777775543 2 589999999963
No 44
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=97.09 E-value=0.0021 Score=50.77 Aligned_cols=38 Identities=8% Similarity=0.052 Sum_probs=26.3
Q ss_pred HHHHHHHHhhCCceEEEecccccccceeEecCCeEEEEEcCC
Q 027185 140 QDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAP 181 (227)
Q Consensus 140 ~~~~~~fl~~~~~~~iiRgH~~~~~G~~~~~~~~~iTifSa~ 181 (227)
.+.+.+++++.+++.+|.||.....++.. +| ++++++|
T Consensus 126 ~~~l~~~~~~~~v~~~i~GH~H~~~~~~~--~g--~~~~~np 163 (166)
T cd07404 126 AVDLDDLILADPIDLWIHGHTHFNFDYRI--GG--TRVLSNQ 163 (166)
T ss_pred hhccHhHHhhcCCCEEEECCccccceEEE--CC--EEEEecC
Confidence 34566777888999999999988765543 33 3555555
No 45
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=97.07 E-value=0.0016 Score=54.74 Aligned_cols=59 Identities=12% Similarity=0.044 Sum_probs=38.6
Q ss_pred eCHHHHHHHHhhCCceEEEecccccccceeEecCCeEEEEEcCCCCCCCCCCeEEEEEEeCCC
Q 027185 138 FGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCR 200 (227)
Q Consensus 138 fG~~~~~~fl~~~~~~~iiRgH~~~~~G~~~~~~~~~iTifSa~~y~~~~~N~~avl~i~~~~ 200 (227)
..+..+++.+++.+.+++|.||+..+.=..+..++.-.+-.+-+++. ..+.++.+++++
T Consensus 172 ~~~~~~~~~~~~~~~~~~i~GHtH~~~~~~~~~~~~~~~~~~lgdW~----~~~~~~~~~~~g 230 (231)
T TIGR01854 172 VNPAEVAAVMRRYGVDRLIHGHTHRPAIHPLQADGQPATRIVLGDWY----RQGSILRVDADG 230 (231)
T ss_pred CCHHHHHHHHHHcCCCEEEECCccCcceeecccCCCccEEEEECCCc----cCCeEEEEcCCC
Confidence 35677888889999999999999776545443333323444555552 235667777654
No 46
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=96.97 E-value=0.04 Score=46.79 Aligned_cols=64 Identities=11% Similarity=-0.019 Sum_probs=36.8
Q ss_pred HHHHHHHHhhCCceEEEecccccccceeEecCCeEEEEEcCCCCCCCCCCeE-EEEEEeCCCCeEEEE
Q 027185 140 QDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMA-SILEVDDCRSHTFIQ 206 (227)
Q Consensus 140 ~~~~~~fl~~~~~~~iiRgH~~~~~G~~~~~~~~~iTifSa~~y~~~~~N~~-avl~i~~~~~~~~~~ 206 (227)
...+.+.+++.+++.++-||......... ++--..+-+|+.++-...+.| .++.++++. ++...
T Consensus 195 ~~~l~~ll~~~~V~~v~~GH~H~~~~~~~--~g~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~~ 259 (262)
T cd07395 195 RKPLLDKFKKAGVKAVFSGHYHRNAGGRY--GGLEMVVTSAIGAQLGNDKSGLRIVKVTEDK-IVHEY 259 (262)
T ss_pred HHHHHHHHHhcCceEEEECccccCCceEE--CCEEEEEcCceecccCCCCCCcEEEEECCCc-eeeee
Confidence 35677778889999999999987665433 332122223333332223344 477776553 34433
No 47
>PRK09453 phosphodiesterase; Provisional
Probab=96.33 E-value=0.0037 Score=50.39 Aligned_cols=36 Identities=31% Similarity=0.442 Sum_probs=26.8
Q ss_pred CccccCCCCC--------cHHHHHHHHhccccCCCeEEEEccCcccch
Q 027185 1 MGDYVDRGYY--------SVETVTLLVALKVRYPQRITILRGNHESRQ 40 (227)
Q Consensus 1 LGDyVDRG~~--------s~evl~~l~~lk~~~p~~v~lLrGNHE~~~ 40 (227)
+||++|+|+. ..+++..|..+. ..+++++||||...
T Consensus 34 lGDi~~~~~~~~~~~~~~~~~~~~~l~~~~----~~v~~V~GNhD~~~ 77 (182)
T PRK09453 34 LGDVLYHGPRNPLPEGYAPKKVAELLNAYA----DKIIAVRGNCDSEV 77 (182)
T ss_pred cccccccCcCCCCccccCHHHHHHHHHhcC----CceEEEccCCcchh
Confidence 6999999984 456777665432 36999999999753
No 48
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=96.33 E-value=0.022 Score=45.34 Aligned_cols=30 Identities=17% Similarity=0.176 Sum_probs=25.4
Q ss_pred eCHHHHHHHHhhCCceEEEeccccccccee
Q 027185 138 FGQDISEQFNHTNNLKLIARAHQLVMDGFN 167 (227)
Q Consensus 138 fG~~~~~~fl~~~~~~~iiRgH~~~~~G~~ 167 (227)
.|.+.+.+++++.+.++++.||.....+..
T Consensus 148 ~g~~~l~~li~~~~~~~~l~GH~H~~~~~~ 177 (188)
T cd07392 148 VGSKAIRKFIEERQPLLCICGHIHESRGVD 177 (188)
T ss_pred cCCHHHHHHHHHhCCcEEEEecccccccee
Confidence 588999999999999999999987765543
No 49
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=96.13 E-value=0.027 Score=45.16 Aligned_cols=40 Identities=23% Similarity=0.272 Sum_probs=24.5
Q ss_pred CccccCCCCCcH--H---HHHHHHhccc-cC----CCeEEEEccCcccch
Q 027185 1 MGDYVDRGYYSV--E---TVTLLVALKV-RY----PQRITILRGNHESRQ 40 (227)
Q Consensus 1 LGDyVDRG~~s~--e---vl~~l~~lk~-~~----p~~v~lLrGNHE~~~ 40 (227)
+||++|.|..+. + .+..+..+.. .. .-.++.++||||...
T Consensus 52 lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g~ 101 (171)
T cd07384 52 LGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGY 101 (171)
T ss_pred eccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccCC
Confidence 699999987532 2 2322222211 11 336999999999864
No 50
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=96.06 E-value=0.084 Score=45.23 Aligned_cols=24 Identities=8% Similarity=0.034 Sum_probs=21.6
Q ss_pred eeCHHHHHHHHhhCCceEEEeccc
Q 027185 137 TFGQDISEQFNHTNNLKLIARAHQ 160 (227)
Q Consensus 137 ~fG~~~~~~fl~~~~~~~iiRgH~ 160 (227)
+-..+.+++.|+..+-.+|.-||+
T Consensus 202 ~l~~~~s~~il~~~~P~~vfsGhd 225 (257)
T cd08163 202 LLEPSLSEVILKAVQPVIAFSGDD 225 (257)
T ss_pred ecCHHHHHHHHHhhCCcEEEecCC
Confidence 457899999999999999999986
No 51
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=95.85 E-value=0.074 Score=40.51 Aligned_cols=29 Identities=21% Similarity=0.258 Sum_probs=24.6
Q ss_pred CHHHHHHHHhhCCceEEEeccccccccee
Q 027185 139 GQDISEQFNHTNNLKLIARAHQLVMDGFN 167 (227)
Q Consensus 139 G~~~~~~fl~~~~~~~iiRgH~~~~~G~~ 167 (227)
|.+.+.+++++.+.++++-||...+..+.
T Consensus 79 g~~~l~~~l~~~~~~~vl~GH~H~~~~~~ 107 (129)
T cd07403 79 GFEAFLDFIDRFRPKLFIHGHTHLNYGYQ 107 (129)
T ss_pred CHHHHHHHHHHHCCcEEEEcCcCCCcCcc
Confidence 66788889998899999999998876665
No 52
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=95.62 E-value=0.12 Score=40.85 Aligned_cols=40 Identities=25% Similarity=0.355 Sum_probs=23.0
Q ss_pred CccccCCCCCcH-H----HHHHHHhccccC-CCeEEEEccCcccch
Q 027185 1 MGDYVDRGYYSV-E----TVTLLVALKVRY-PQRITILRGNHESRQ 40 (227)
Q Consensus 1 LGDyVDRG~~s~-e----vl~~l~~lk~~~-p~~v~lLrGNHE~~~ 40 (227)
+||++|.|..+- + .+..+.++.... .-.+++++||||...
T Consensus 45 ~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~~ 90 (156)
T cd08165 45 LGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIGF 90 (156)
T ss_pred CCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcCC
Confidence 699999886432 2 222222221111 235899999999743
No 53
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=95.44 E-value=0.13 Score=41.78 Aligned_cols=37 Identities=19% Similarity=0.193 Sum_probs=24.2
Q ss_pred CccccCCCCC---cHHHHHHHHhccccCCCeEEEEccCcc
Q 027185 1 MGDYVDRGYY---SVETVTLLVALKVRYPQRITILRGNHE 37 (227)
Q Consensus 1 LGDyVDRG~~---s~evl~~l~~lk~~~p~~v~lLrGNHE 37 (227)
+||+++.+.. +.+.+..++.......-.++++.||||
T Consensus 48 ~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~GNHD 87 (199)
T cd07383 48 TGDLITGENTNDNSTSALDKAVSPMIDRKIPWAATFGNHD 87 (199)
T ss_pred CCccccCCCCchHHHHHHHHHHHHHHHcCCCEEEECccCC
Confidence 5999997765 355555544332222234889999999
No 54
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=95.07 E-value=0.022 Score=45.35 Aligned_cols=36 Identities=33% Similarity=0.525 Sum_probs=26.1
Q ss_pred CccccCCCCCcHHHHHHHHhccccCCCeEEEEccCcccchh
Q 027185 1 MGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQI 41 (227)
Q Consensus 1 LGDyVDRG~~s~evl~~l~~lk~~~p~~v~lLrGNHE~~~~ 41 (227)
+||++++|..+.. +.++..+ +..+++++||||....
T Consensus 49 ~GDl~~~~~~~~~-~~~l~~~----~~~~~~v~GNHD~~~~ 84 (168)
T cd07390 49 LGDFSFGGKAGTE-LELLSRL----NGRKHLIKGNHDSSLE 84 (168)
T ss_pred eCCCCCCCChHHH-HHHHHhC----CCCeEEEeCCCCchhh
Confidence 6999999987644 4444433 2359999999997644
No 55
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=95.01 E-value=0.024 Score=46.69 Aligned_cols=38 Identities=29% Similarity=0.335 Sum_probs=27.8
Q ss_pred CccccCCCCCcH-HHHHHHHhccccCCCeEEEEccCcccch
Q 027185 1 MGDYVDRGYYSV-ETVTLLVALKVRYPQRITILRGNHESRQ 40 (227)
Q Consensus 1 LGDyVDRG~~s~-evl~~l~~lk~~~p~~v~lLrGNHE~~~ 40 (227)
.||++|.+..+. ++..++..++.. ..++++.||||...
T Consensus 39 ~GD~~~~~~~~~~~~~~~l~~l~~~--~~v~~v~GNHD~~~ 77 (223)
T cd07385 39 TGDLVDGSVDVLELLLELLKKLKAP--LGVYAVLGNHDYYS 77 (223)
T ss_pred cCcccCCcchhhHHHHHHHhccCCC--CCEEEECCCccccc
Confidence 599999998775 555555555433 35999999999853
No 56
>PRK04036 DNA polymerase II small subunit; Validated
Probab=94.91 E-value=0.24 Score=46.52 Aligned_cols=52 Identities=17% Similarity=0.293 Sum_probs=31.1
Q ss_pred eEEEecccccccceeEecCCeEEEEEcCCCCCC------C---CCCeEEEEEEe-CCCCeEEEEEe
Q 027185 153 KLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCY------R---CGNMASILEVD-DCRSHTFIQFE 208 (227)
Q Consensus 153 ~~iiRgH~~~~~G~~~~~~~~~iTifSa~~y~~------~---~~N~~avl~i~-~~~~~~~~~~~ 208 (227)
++++-||+.. .|+....+-+++ +++.+.. + ....|.++.++ +++++....|.
T Consensus 442 dv~~~GH~H~-~~~~~~~g~~~I---N~gsf~~~t~fq~~~~~~p~~~~~~lv~l~tl~~~~~~f~ 503 (504)
T PRK04036 442 DIFHTGHVHI-NGYGKYRGVLLI---NSGTWQAQTEFQKRVNIVPTPARVPIVDLDTLEVTVLDFD 503 (504)
T ss_pred CEEEeCCCCc-cceEEECCEEEE---ECCcccccccccceeccCCCCCEEEEEECCCCcEEEEEec
Confidence 7889999976 566655442333 3344432 0 12356666676 77788877774
No 57
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=94.79 E-value=0.023 Score=46.72 Aligned_cols=39 Identities=21% Similarity=0.370 Sum_probs=27.6
Q ss_pred CccccCCCCCc--HHHHHHHHhccccCC----CeEEEEccCcccc
Q 027185 1 MGDYVDRGYYS--VETVTLLVALKVRYP----QRITILRGNHESR 39 (227)
Q Consensus 1 LGDyVDRG~~s--~evl~~l~~lk~~~p----~~v~lLrGNHE~~ 39 (227)
|||++|.|+.+ .|....+..++..++ ..++.+.||||.-
T Consensus 49 lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG 93 (195)
T cd08166 49 LGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIG 93 (195)
T ss_pred eccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcC
Confidence 79999999964 346665555543322 3588999999974
No 58
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=94.69 E-value=0.03 Score=48.18 Aligned_cols=37 Identities=27% Similarity=0.211 Sum_probs=26.1
Q ss_pred CccccCCC--CCcHHHHHHHHhccccCCCeEEEEccCcccc
Q 027185 1 MGDYVDRG--YYSVETVTLLVALKVRYPQRITILRGNHESR 39 (227)
Q Consensus 1 LGDyVDRG--~~s~evl~~l~~lk~~~p~~v~lLrGNHE~~ 39 (227)
.||++|++ .+.-++...|..|+...| ++.+.||||..
T Consensus 87 ~GD~~d~~~~~~~~~~~~~L~~L~~~~p--v~~V~GNHD~~ 125 (271)
T PRK11340 87 GGDYVLFDMPLNFSAFSDVLSPLAECAP--TFACFGNHDRP 125 (271)
T ss_pred ccCcCCCCccccHHHHHHHHHHHhhcCC--EEEecCCCCcc
Confidence 59999954 233455566666765444 99999999974
No 59
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=93.46 E-value=0.087 Score=44.24 Aligned_cols=53 Identities=8% Similarity=0.041 Sum_probs=35.0
Q ss_pred eeCHHHHHHHHhhCCceEEEecccccccceeEecCCeEEEEEcCCCCCCCCCCeEEEEEEe
Q 027185 137 TFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVD 197 (227)
Q Consensus 137 ~fG~~~~~~fl~~~~~~~iiRgH~~~~~G~~~~~~~~~iTifSa~~y~~~~~N~~avl~i~ 197 (227)
-.|.+++.+|.++..-.++|.||=- .|.+. -|+.+-|.-.| +. ...+|++.++
T Consensus 165 h~GS~alr~~I~~~~P~l~i~GHih--~~~~~--~g~t~vvNpg~-~~---~g~~a~i~~~ 217 (224)
T cd07388 165 EQGSHEVAHLIKTHNPLVVLVGGKG--QKHEL--LGASWVVVPGD-LS---EGRYALLDLR 217 (224)
T ss_pred ccCHHHHHHHHHHhCCCEEEEcCCc--eeEEE--eCCEEEECCCc-cc---CCcEEEEEec
Confidence 5799999999999999999999633 44443 23444444333 21 2246777775
No 60
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=93.42 E-value=0.06 Score=51.12 Aligned_cols=69 Identities=20% Similarity=0.276 Sum_probs=46.6
Q ss_pred CHHHHHHHHhhCCce----EEEecccccc--cceeE-ecCCeEEEE---EcCCCCCCCCCCeEEEEEEeCCCCeEEEEEe
Q 027185 139 GQDISEQFNHTNNLK----LIARAHQLVM--DGFNW-AHEQKVVTI---FSAPNYCYRCGNMASILEVDDCRSHTFIQFE 208 (227)
Q Consensus 139 G~~~~~~fl~~~~~~----~iiRgH~~~~--~G~~~-~~~~~~iTi---fSa~~y~~~~~N~~avl~i~~~~~~~~~~~~ 208 (227)
.++.....|+..|++ .||-||.||. .|=.. .++||++.| ||.+ |....+=+|=.|..+.. -+.+.+-+
T Consensus 507 ~e~~c~~IL~EFgl~~~~~hIINGHvPVk~k~GEsPIKa~Gkl~VIDGGfskA-Yqk~TGIAGYTLiyNS~-gl~L~~H~ 584 (640)
T PF06874_consen 507 DEEICDKILEEFGLDPERGHIINGHVPVKVKKGESPIKANGKLIVIDGGFSKA-YQKTTGIAGYTLIYNSY-GLQLVAHQ 584 (640)
T ss_pred CHHHHHHHHHHhCCCCCCCeEECCccccccCCCCCCccCCCEEEEEcChhhhh-hccccCccceEEEecCC-cceeccCC
Confidence 467778889999998 9999999998 67664 568999999 4543 65554434444544333 34554444
Q ss_pred c
Q 027185 209 P 209 (227)
Q Consensus 209 ~ 209 (227)
|
T Consensus 585 p 585 (640)
T PF06874_consen 585 P 585 (640)
T ss_pred C
Confidence 4
No 61
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=93.38 E-value=0.073 Score=43.55 Aligned_cols=41 Identities=29% Similarity=0.363 Sum_probs=26.6
Q ss_pred CccccCCCCCcHHHHHHHHhc-ccc--CCCeEEEEccCcccchh
Q 027185 1 MGDYVDRGYYSVETVTLLVAL-KVR--YPQRITILRGNHESRQI 41 (227)
Q Consensus 1 LGDyVDRG~~s~evl~~l~~l-k~~--~p~~v~lLrGNHE~~~~ 41 (227)
.||++|....+.+.+..+... +.. ..-.++++.||||....
T Consensus 48 ~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~GNHD~~~~ 91 (223)
T cd00840 48 AGDLFDSNNPSPEALELLIEALRRLKEAGIPVFIIAGNHDSPSR 91 (223)
T ss_pred CCcccCCCCCCHHHHHHHHHHHHHHHHCCCCEEEecCCCCCccc
Confidence 599999987665544433332 111 13359999999998654
No 62
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=93.36 E-value=0.077 Score=44.60 Aligned_cols=29 Identities=17% Similarity=0.043 Sum_probs=24.7
Q ss_pred eeCHHHHHHHHhhCCceEEEecccccccc
Q 027185 137 TFGQDISEQFNHTNNLKLIARAHQLVMDG 165 (227)
Q Consensus 137 ~fG~~~~~~fl~~~~~~~iiRgH~~~~~G 165 (227)
.+|...+.+++++.+++++|.||.....+
T Consensus 195 ~~~s~~l~~li~~~~v~~~i~GH~H~~~~ 223 (239)
T TIGR03729 195 FLGSQHFGQLLVKYEIKDVIFGHLHRRFG 223 (239)
T ss_pred ccChHHHHHHHHHhCCCEEEECCccCCCC
Confidence 56888899999999999999999876544
No 63
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=93.33 E-value=0.081 Score=42.21 Aligned_cols=39 Identities=21% Similarity=0.229 Sum_probs=23.0
Q ss_pred CccccCCCCCc--HHHHHH-HHhccccCCCeEEEEccCcccch
Q 027185 1 MGDYVDRGYYS--VETVTL-LVALKVRYPQRITILRGNHESRQ 40 (227)
Q Consensus 1 LGDyVDRG~~s--~evl~~-l~~lk~~~p~~v~lLrGNHE~~~ 40 (227)
+||++|+...+ .+.... +..+. ..+-.+++++||||...
T Consensus 48 ~GDl~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~i~GNHD~~~ 89 (172)
T cd07391 48 LGDLKHSFGGLSRQEFEEVAFLRLL-AKDVDVILIRGNHDGGL 89 (172)
T ss_pred eCcccccccccCHHHHHHHHHHHhc-cCCCeEEEEcccCccch
Confidence 69999875433 222221 12221 23347999999999853
No 64
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=93.14 E-value=0.0016 Score=59.50 Aligned_cols=178 Identities=13% Similarity=-0.018 Sum_probs=108.1
Q ss_pred ccccCCCCCcHHHHHHHHhccccCCCeEEEEccCcccchhhcccCcHHHHHHHhCCh--hhHHHHHHHHhcCccceeecC
Q 027185 2 GDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNA--NIWKIFTDLFDYFPLTALVES 79 (227)
Q Consensus 2 GDyVDRG~~s~evl~~l~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~g~~--~~~~~~~~~f~~LPla~~i~~ 79 (227)
|++++++....+.+..+...+...|+...+.|++||+..+-..++|..++...++.. .+...+...+.. |++....+
T Consensus 79 g~a~m~l~~~~~A~~~l~~~~~l~Pnd~~~~r~~~Ec~~~vs~~~fe~ai~~~~~d~~s~~~~~~~~~~~~-~i~~~y~g 157 (476)
T KOG0376|consen 79 GTAVMALGEFKKALLDLEKVKKLAPNDPDATRKIDECNKIVSEEKFEKAILTPEGDKKSVVEMKIDEEDMD-LIESDYSG 157 (476)
T ss_pred cHHHHhHHHHHHHHHHHHHhhhcCcCcHHHHHHHHHHHHHHHHHhhhhcccCCccCCcccccccccccccc-ccccccCC
Confidence 788999999999999999999999999999999999998888888887776666421 122212111111 13333332
Q ss_pred eEEEEeCCCCC------------------Cc--cccccc----cccccccccCCCCCccccccCCCCCCCC-CCcCCCCC
Q 027185 80 EIFCLHGGLSP------------------SI--ETLDNI----RNFDRVQEVPHEGPMCDLLWSDPDDRCG-WGISPRGA 134 (227)
Q Consensus 80 ~~l~vHgGi~p------------------~~--~~~~~i----~~i~r~~~~~~~~~~~dllWsdP~~~~~-~~~~~rg~ 134 (227)
.++=-| -+.- .. .-+++. +.+..+.+.. .-.+..|+++.+..| +.+..++.
T Consensus 158 ~~le~~-kvt~e~vk~~~~~~~~~~~L~~k~a~~i~~~~~~~~~~l~~~ve~~---~~~d~~~sv~gd~hGqfydl~nif 233 (476)
T KOG0376|consen 158 PVLEDH-KVTLEFVKTLMEVFKNQKKLPKKYAYSILDLAKTILRKLPSLVEIS---VPGDVKISVCGDTHGQFYDLLNIF 233 (476)
T ss_pred cccccc-hhhHHHHHHHHHhhhcccccccccceeeHHHHhhHHhcCCcceEee---cCCCceEEecCCccccccchhhhH
Confidence 221111 1000 00 000000 1111111111 345778998876443 44556677
Q ss_pred eeeeCHHHHHHHHhhCCceEEEecccccc------------cceeEec---CCeEEEEEcCCCCC
Q 027185 135 GYTFGQDISEQFNHTNNLKLIARAHQLVM------------DGFNWAH---EQKVVTIFSAPNYC 184 (227)
Q Consensus 135 g~~fG~~~~~~fl~~~~~~~iiRgH~~~~------------~G~~~~~---~~~~iTifSa~~y~ 184 (227)
+...++..+..|+.+.++.-+.+.+.-+. .+|...+ .+.+++||+++.++
T Consensus 234 ~l~g~Ps~t~~ylfngdfv~rgs~s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~ 298 (476)
T KOG0376|consen 234 ELNGLPSETNPYLFNGDFVDRGSWSVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEV 298 (476)
T ss_pred hhcCCCCCcccccccCceeeecccceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcch
Confidence 77778888889999888888888876322 2333322 23689999999876
No 65
>KOG0918 consensus Selenium-binding protein [Inorganic ion transport and metabolism]
Probab=92.84 E-value=0.0039 Score=55.91 Aligned_cols=188 Identities=9% Similarity=-0.106 Sum_probs=107.8
Q ss_pred CccccCCCCCcHHHHHHHHhccccCCCeEEEEccCcccchhhcccCcHHHHHHHhC---ChhhHHHHHHHHhcCccceee
Q 027185 1 MGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYG---NANIWKIFTDLFDYFPLTALV 77 (227)
Q Consensus 1 LGDyVDRG~~s~evl~~l~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~g---~~~~~~~~~~~f~~LPla~~i 77 (227)
|+++++++.++++.+-+-+..+..+-.+-...++||+.. +++.+++.-.-+ ...+++..++-++..+...+.
T Consensus 54 vdp~s~t~c~vI~r~~~~~~gdelhhsgwn~~ssc~~~~-----~~~R~~LVlp~l~S~riyvid~~~ep~~~~l~k~i~ 128 (476)
T KOG0918|consen 54 VDPSSPTYCQVIHRLPMPYLGDELHHSGWNSCSSCHGDS-----SFKRRYLVLPSLNSGRIYVIDVKTEPRKPSLEKTID 128 (476)
T ss_pred cCCCCCcceeeEEEeccCcccchhcccchhhhhhhccCc-----chhhhheeecccccCceEEEEeccCcCccceeeeec
Confidence 578899999999999998888888777788999999443 333333332221 234566677878888888766
Q ss_pred cCeEEEEeCCCCCCccccccccccccccccCCCCCccccccCCCCCCC-----CCCcCCCCCeeeeCHHH--HHHHHhhC
Q 027185 78 ESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRC-----GWGISPRGAGYTFGQDI--SEQFNHTN 150 (227)
Q Consensus 78 ~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdP~~~~-----~~~~~~rg~g~~fG~~~--~~~fl~~~ 150 (227)
+ ++++.||+..|.......+..+.-.. +.+.....+ .|-++-+.. .|.. ++....||.+- .-.+....
T Consensus 129 ~-~il~~~~l~~Pht~hcla~g~v~vs~-lGd~~gn~k-g~f~llD~~~~~k~tw~~--~~~~p~~gyDfwyqpr~~~mI 203 (476)
T KOG0918|consen 129 P-DILEKTGLACPHTSHCLASGNVMVSC-LGDAEGNAK-GGFLLLDSDFNEKGTWEK--PGHSPLFGYDFWYQPRHNVMI 203 (476)
T ss_pred h-hhHhhcCCcCCcccccccCCCeeEEe-ecccccCCc-CCeEEecCccceeccccc--CCCccccccceeeccccceEE
Confidence 6 89999999999765443333221110 000000001 122222211 2221 11222222221 11222333
Q ss_pred CceEEEecccccccceeEecCCeEEEEEcCCCCCCCCCCeEEEEEEeCCC
Q 027185 151 NLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCR 200 (227)
Q Consensus 151 ~~~~iiRgH~~~~~G~~~~~~~~~iTifSa~~y~~~~~N~~avl~i~~~~ 200 (227)
+.+...+.|+....+.....++ ++.++..-|.-...|..+.+.+..++
T Consensus 204 stewgap~~~~~gf~~~~v~d~--lyg~~lhvy~w~~~~~~QtidL~~~g 251 (476)
T KOG0918|consen 204 STEWGAPNALRKGFNPADVEDG--LYGSHLHVYQWSPGELKQTIDLGDTG 251 (476)
T ss_pred eecccCchhhhcCCChhHhhcc--ceeeeeEEEecCCccceeEEecCCCC
Confidence 3444556665443344344455 88888888877778888999887764
No 66
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=92.46 E-value=0.11 Score=43.58 Aligned_cols=43 Identities=2% Similarity=-0.109 Sum_probs=27.3
Q ss_pred CHHHHHHHHhhCCceEEEeccccccccee---EecCCeEEEEEcCCCC
Q 027185 139 GQDISEQFNHTNNLKLIARAHQLVMDGFN---WAHEQKVVTIFSAPNY 183 (227)
Q Consensus 139 G~~~~~~fl~~~~~~~iiRgH~~~~~G~~---~~~~~~~iTifSa~~y 183 (227)
+...+.+.+++.++++++-||.....-.. ...+| ++.+++|.=
T Consensus 181 ~~~~~~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~~g--i~~~~~~~~ 226 (232)
T cd07393 181 DDSPISKLIEEYGVDICVYGHLHGVGRDRAINGERGG--IRYQLVSAD 226 (232)
T ss_pred CHHHHHHHHHHcCCCEEEECCCCCCcccccccceECC--EEEEEEcch
Confidence 44566778888899999999986643322 12344 455555543
No 67
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=92.35 E-value=4.1 Score=32.79 Aligned_cols=67 Identities=15% Similarity=0.056 Sum_probs=38.6
Q ss_pred HHHHHHHHhhCCceEEEecccccccceeEecCCeEEEEE--cCCCCCCCCCCeEEEEEEe-CCCCeEEEEEecCC
Q 027185 140 QDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIF--SAPNYCYRCGNMASILEVD-DCRSHTFIQFEPAP 211 (227)
Q Consensus 140 ~~~~~~fl~~~~~~~iiRgH~~~~~G~~~~~~~~~iTif--Sa~~y~~~~~N~~avl~i~-~~~~~~~~~~~~~~ 211 (227)
...++.+-+..+.+.+|.||+..+.=.+ . ++ ++-|- |.+.+- .++..+++.++ ++.++....++...
T Consensus 98 ~~~l~~la~~~~~Dvli~GHTH~p~~~~-~-~~-i~~vNPGS~s~pr--~~~~~sy~il~~~~~~~~~~~~~~~~ 167 (172)
T COG0622 98 LSLLEYLAKELGADVLIFGHTHKPVAEK-V-GG-ILLVNPGSVSGPR--GGNPASYAILDVDNLEVEVLFLERDR 167 (172)
T ss_pred HHHHHHHHHhcCCCEEEECCCCcccEEE-E-CC-EEEEcCCCcCCCC--CCCCcEEEEEEcCCCEEEEEEeeccc
Confidence 3455666777889999999998753332 2 22 22221 444442 24554555555 44667777766543
No 68
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=92.32 E-value=0.17 Score=43.20 Aligned_cols=39 Identities=28% Similarity=0.428 Sum_probs=26.3
Q ss_pred CccccCCCCCcHHHH----HHHHhccccCCCeEEEEccCcccc
Q 027185 1 MGDYVDRGYYSVETV----TLLVALKVRYPQRITILRGNHESR 39 (227)
Q Consensus 1 LGDyVDRG~~s~evl----~~l~~lk~~~p~~v~lLrGNHE~~ 39 (227)
.||++|+...+.+.. .++..|+...|-.++++.||||..
T Consensus 46 ~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~v~~i~GNHD~~ 88 (253)
T TIGR00619 46 AGDVFDTANPPAEAQELFNAFFRNLSDANPIPIVVISGNHDSA 88 (253)
T ss_pred CCccCCCCCCCHHHHHHHHHHHHHHHhcCCceEEEEccCCCCh
Confidence 599999986665443 334444433334699999999985
No 69
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=91.80 E-value=0.17 Score=43.36 Aligned_cols=58 Identities=5% Similarity=-0.023 Sum_probs=32.8
Q ss_pred eCHHHHHHHHhh-CCceEEEecccccccceeEecCCeEEEEEcCCCCCCCCCCeEE--EEEEeCC
Q 027185 138 FGQDISEQFNHT-NNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMAS--ILEVDDC 199 (227)
Q Consensus 138 fG~~~~~~fl~~-~~~~~iiRgH~~~~~G~~~~~~~~~iTifSa~~y~~~~~N~~a--vl~i~~~ 199 (227)
...+.+.+.+++ .++++++-||.....-. ..+| ++.+++|.=|+...+.+| ++.+.++
T Consensus 202 ~~~~~~~~ll~~~~~V~~v~~GH~H~~~~~--~~~g--i~~~~~~a~~~~~~~~~~~~~~~~~~~ 262 (267)
T cd07396 202 WNHEEVLSILRAYGCVKACISGHDHEGGYA--QRHG--IHFLTLEGMVETPPESNAFGVVIVYED 262 (267)
T ss_pred cCHHHHHHHHHhCCCEEEEEcCCcCCCCcc--ccCC--eeEEEechhhcCCCCCCceEEEEEeCC
Confidence 345667778877 58999999998775422 2344 344444443433334443 3444443
No 70
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=91.38 E-value=0.21 Score=42.93 Aligned_cols=67 Identities=15% Similarity=0.126 Sum_probs=38.9
Q ss_pred eCHHHHHHHHhhC-CceEEEecccccccceeEecCCeEEEEEcCCCCCCC----CC-----C--eE-EEEEEeCCCCeEE
Q 027185 138 FGQDISEQFNHTN-NLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYR----CG-----N--MA-SILEVDDCRSHTF 204 (227)
Q Consensus 138 fG~~~~~~fl~~~-~~~~iiRgH~~~~~G~~~~~~~~~iTifSa~~y~~~----~~-----N--~~-avl~i~~~~~~~~ 204 (227)
-+.+.+.+.+++. +++.++-||.....-. ..+|- +++++|.-|.. .+ + .| .++.+++++.+..
T Consensus 181 ~n~~~l~~ll~~~~~v~~vl~GH~H~~~~~--~~~gi--~~~~~ps~~~q~~~~~~~~~~~~~~~g~~~~~l~~~g~~~~ 256 (275)
T PRK11148 181 RNAHELAEVLAKFPNVKAILCGHIHQELDL--DWNGR--RLLATPSTCVQFKPHCTNFTLDTVAPGWRELELHADGSLET 256 (275)
T ss_pred CCHHHHHHHHhcCCCceEEEecccChHHhc--eECCE--EEEEcCCCcCCcCCCCCccccccCCCcEEEEEEcCCCcEEE
Confidence 3667888889886 8999999998764322 22332 34444433311 01 1 12 3677777776655
Q ss_pred EEEe
Q 027185 205 IQFE 208 (227)
Q Consensus 205 ~~~~ 208 (227)
...+
T Consensus 257 ~~~~ 260 (275)
T PRK11148 257 EVHR 260 (275)
T ss_pred EEEE
Confidence 4433
No 71
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=91.34 E-value=0.25 Score=42.15 Aligned_cols=28 Identities=14% Similarity=0.153 Sum_probs=23.2
Q ss_pred HHHHHhhCCceEEEecccccccceeEec
Q 027185 143 SEQFNHTNNLKLIARAHQLVMDGFNWAH 170 (227)
Q Consensus 143 ~~~fl~~~~~~~iiRgH~~~~~G~~~~~ 170 (227)
+.+.+++.++++++.||.....+....+
T Consensus 190 ~~~ll~~~~v~~vl~GH~H~~~~~~p~h 217 (256)
T cd07401 190 FKDLLKKYNVTAYLCGHLHPLGGLEPVH 217 (256)
T ss_pred HHHHHHhcCCcEEEeCCccCCCcceeee
Confidence 6777888999999999998877756654
No 72
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=91.19 E-value=0.24 Score=41.20 Aligned_cols=26 Identities=12% Similarity=-0.001 Sum_probs=21.0
Q ss_pred CHHHHHHHHhhC-CceEEEeccccccc
Q 027185 139 GQDISEQFNHTN-NLKLIARAHQLVMD 164 (227)
Q Consensus 139 G~~~~~~fl~~~-~~~~iiRgH~~~~~ 164 (227)
+...+.+.+++. ++++++-||.....
T Consensus 169 ~~~~~~~~l~~~~~v~~v~~GH~H~~~ 195 (240)
T cd07402 169 NAEALAAVLARHPNVRAILCGHVHRPI 195 (240)
T ss_pred CHHHHHHHHhcCCCeeEEEECCcCchH
Confidence 466777888888 99999999987743
No 73
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=91.17 E-value=0.21 Score=43.46 Aligned_cols=38 Identities=32% Similarity=0.398 Sum_probs=26.9
Q ss_pred CccccCC-CCCcHH-HHHHHHhccccCCCeEEEEccCcccch
Q 027185 1 MGDYVDR-GYYSVE-TVTLLVALKVRYPQRITILRGNHESRQ 40 (227)
Q Consensus 1 LGDyVDR-G~~s~e-vl~~l~~lk~~~p~~v~lLrGNHE~~~ 40 (227)
.|||+|+ .+...+ ++..|..|+..+ .++++.||||...
T Consensus 80 tGD~~~~~~~~~~~~~~~~L~~L~~~~--gv~av~GNHd~~~ 119 (284)
T COG1408 80 TGDYVDGDRPPGVAALALFLAKLKAPL--GVFAVLGNHDYGV 119 (284)
T ss_pred EeeeecCCCCCCHHHHHHHHHhhhccC--CEEEEeccccccc
Confidence 3999996 555544 555566666544 6999999998754
No 74
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=89.71 E-value=0.36 Score=44.15 Aligned_cols=39 Identities=28% Similarity=0.410 Sum_probs=25.4
Q ss_pred CccccCCCCCcHHHH----HHHHhccccCCCeEEEEccCcccch
Q 027185 1 MGDYVDRGYYSVETV----TLLVALKVRYPQRITILRGNHESRQ 40 (227)
Q Consensus 1 LGDyVDRG~~s~evl----~~l~~lk~~~p~~v~lLrGNHE~~~ 40 (227)
.||++|++..+.+.. .++..|+.. +-.++++.||||...
T Consensus 46 aGDifD~~~p~~~a~~~~~~~l~~L~~~-~~~v~~I~GNHD~~~ 88 (407)
T PRK10966 46 AGDIFDTGSPPSYARELYNRFVVNLQQT-GCQLVVLAGNHDSVA 88 (407)
T ss_pred CCccccCCCCcHHHHHHHHHHHHHHHhc-CCcEEEEcCCCCChh
Confidence 599999986654432 233344322 235999999999753
No 75
>PHA02546 47 endonuclease subunit; Provisional
Probab=89.24 E-value=0.42 Score=42.56 Aligned_cols=40 Identities=20% Similarity=0.297 Sum_probs=25.4
Q ss_pred CccccCCC-CCcHHHHHHHHh--cc--ccCCCeEEEEccCcccch
Q 027185 1 MGDYVDRG-YYSVETVTLLVA--LK--VRYPQRITILRGNHESRQ 40 (227)
Q Consensus 1 LGDyVDRG-~~s~evl~~l~~--lk--~~~p~~v~lLrGNHE~~~ 40 (227)
.||+.|+. +.+.+++.++.. ++ ...+-.|+++.||||...
T Consensus 46 aGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~I~GNHD~~~ 90 (340)
T PHA02546 46 LGDTFDVRKAITQNTMNFVREKIFDLLKEAGITLHVLVGNHDMYY 90 (340)
T ss_pred CCcccCCCCCCCHHHHHHHHHHHHHHHHHCCCeEEEEccCCCccc
Confidence 59999985 555555544432 11 122346999999999743
No 76
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=88.16 E-value=0.48 Score=39.79 Aligned_cols=36 Identities=17% Similarity=0.142 Sum_probs=23.1
Q ss_pred CccccCCCCC---cHHHHHHHHhccccCCCeEEEEccCcccch
Q 027185 1 MGDYVDRGYY---SVETVTLLVALKVRYPQRITILRGNHESRQ 40 (227)
Q Consensus 1 LGDyVDRG~~---s~evl~~l~~lk~~~p~~v~lLrGNHE~~~ 40 (227)
+||+.+.... .-++..++..+. ..+++++||||...
T Consensus 65 ~GDl~h~~~~~~~~~~~~~~l~~~~----~~v~~V~GNHD~~~ 103 (225)
T TIGR00024 65 NGDLKHEFKKGLEWRFIREFIEVTF----RDLILIRGNHDALI 103 (225)
T ss_pred cCccccccCChHHHHHHHHHHHhcC----CcEEEECCCCCCcc
Confidence 6999976544 223334444332 27999999999754
No 77
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=87.68 E-value=0.68 Score=42.73 Aligned_cols=38 Identities=29% Similarity=0.468 Sum_probs=31.4
Q ss_pred CccccCCCCCcHHHHHHHHhccccCCCeEEEEccCcccchhhc
Q 027185 1 MGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQ 43 (227)
Q Consensus 1 LGDyVDRG~~s~evl~~l~~lk~~~p~~v~lLrGNHE~~~~~~ 43 (227)
+||+-||||+.-.++.-|..+ + ++=+-.|||+...+..
T Consensus 197 VGDIyDRGP~pd~Imd~L~~y----h-svDiQWGNHDilWmgA 234 (648)
T COG3855 197 VGDIYDRGPYPDKIMDTLINY----H-SVDIQWGNHDILWMGA 234 (648)
T ss_pred ecccccCCCCchHHHHHHhhc----c-cccccccCcceEEeec
Confidence 699999999999999988754 3 6778899999966543
No 78
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=87.03 E-value=0.63 Score=39.35 Aligned_cols=41 Identities=24% Similarity=0.532 Sum_probs=26.8
Q ss_pred CccccCCCC-CcHHHHHHHHhccccCCCeEEEEccCcccchhh
Q 027185 1 MGDYVDRGY-YSVETVTLLVALKVRYPQRITILRGNHESRQIT 42 (227)
Q Consensus 1 LGDyVDRG~-~s~evl~~l~~lk~~~p~~v~lLrGNHE~~~~~ 42 (227)
-||+.++|. .+.+-+..++. +...|..+++++||||.+...
T Consensus 40 tGDl~~~~~~~~~~~~~~~l~-~~~~~~~~~~vpGNHD~~~~~ 81 (301)
T COG1409 40 TGDLTNDGEPEEYRRLKELLA-RLELPAPVIVVPGNHDARVVN 81 (301)
T ss_pred ccCcCCCCCHHHHHHHHHHHh-hccCCCceEeeCCCCcCCchH
Confidence 399999973 23333333332 234566799999999997654
No 79
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=87.01 E-value=1.4 Score=37.31 Aligned_cols=55 Identities=16% Similarity=0.048 Sum_probs=37.2
Q ss_pred eCHHHHHHHHhhCCceEEEecccccccceeEecCCeEEEEEcCCCCCCCCCCeEEEEEEeCCC
Q 027185 138 FGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCR 200 (227)
Q Consensus 138 fG~~~~~~fl~~~~~~~iiRgH~~~~~G~~~~~~~~~iTifSa~~y~~~~~N~~avl~i~~~~ 200 (227)
..+..+.+-+++++++.+|.||+..+..-.... ..-|- +|.--..+++++++++.
T Consensus 174 ~~~~~v~~~~~~~~vd~vI~GH~Hr~ai~~i~~-~~yi~-------lGdW~~~~s~~~v~~~~ 228 (237)
T COG2908 174 VNPAAVADEARRHGVDGVIHGHTHRPAIHNIPG-ITYIN-------LGDWVSEGSILEVDDGG 228 (237)
T ss_pred hhHHHHHHHHHHcCCCEEEecCcccHhhccCCC-ceEEe-------cCcchhcceEEEEecCc
Confidence 467778888999999999999998876665542 11111 11222457899997764
No 80
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=86.71 E-value=0.41 Score=40.27 Aligned_cols=38 Identities=29% Similarity=0.372 Sum_probs=23.4
Q ss_pred CccccCCCC-----C----------c-HHHHHHHHhccccCCCeEEEEccCcccch
Q 027185 1 MGDYVDRGY-----Y----------S-VETVTLLVALKVRYPQRITILRGNHESRQ 40 (227)
Q Consensus 1 LGDyVDRG~-----~----------s-~evl~~l~~lk~~~p~~v~lLrGNHE~~~ 40 (227)
+||++|+.. . . .++..++-.|... -.|+++.||||...
T Consensus 42 ~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~--~~v~~ipGNHD~~~ 95 (243)
T cd07386 42 AGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVPSH--IKIIIIPGNHDAVR 95 (243)
T ss_pred eCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhcccC--CeEEEeCCCCCccc
Confidence 599999831 0 1 1233444444432 36999999999853
No 81
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=86.53 E-value=0.64 Score=37.93 Aligned_cols=30 Identities=3% Similarity=-0.035 Sum_probs=22.8
Q ss_pred eCHHHHHHHHhhCCceEEEeccccccccee
Q 027185 138 FGQDISEQFNHTNNLKLIARAHQLVMDGFN 167 (227)
Q Consensus 138 fG~~~~~~fl~~~~~~~iiRgH~~~~~G~~ 167 (227)
.....+.+.++..+.+.+|.||...+.-..
T Consensus 176 ~~~~~~~~~~~~~~~~~~i~GH~H~~~~~~ 205 (217)
T cd07398 176 VFEEAVARLARRKGVDGVICGHTHRPALHE 205 (217)
T ss_pred HHHHHHHHHHHhcCCCEEEECCCCCCCeEE
Confidence 345666777889999999999997764443
No 82
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=85.95 E-value=0.68 Score=41.77 Aligned_cols=39 Identities=23% Similarity=0.366 Sum_probs=28.9
Q ss_pred ccccCCCCCcHHHHHHHHhc-cccC--CCeEEEEccCcccch
Q 027185 2 GDYVDRGYYSVETVTLLVAL-KVRY--PQRITILRGNHESRQ 40 (227)
Q Consensus 2 GDyVDRG~~s~evl~~l~~l-k~~~--p~~v~lLrGNHE~~~ 40 (227)
||+.|++.-|.+++..+... +... --.|++|.||||...
T Consensus 48 GDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv~~I~GNHD~~~ 89 (390)
T COG0420 48 GDLFDTNNPSPRALKLFLEALRRLKDAGIPVVVIAGNHDSPS 89 (390)
T ss_pred cccccCCCCCHHHHHHHHHHHHHhccCCCcEEEecCCCCchh
Confidence 99999999888888775553 2111 014999999999965
No 83
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=85.81 E-value=0.81 Score=41.86 Aligned_cols=21 Identities=14% Similarity=0.097 Sum_probs=16.9
Q ss_pred CccccCCCCCcHHHHHHHHhc
Q 027185 1 MGDYVDRGYYSVETVTLLVAL 21 (227)
Q Consensus 1 LGDyVDRG~~s~evl~~l~~l 21 (227)
-||+.|++.-|.+++..++.+
T Consensus 49 aGDLFd~~~Ps~~~~~~~~~~ 69 (405)
T TIGR00583 49 GGDLFHENKPSRKSLYQVLRS 69 (405)
T ss_pred CCccCCCCCCCHHHHHHHHHH
Confidence 399999999999988665543
No 84
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=84.86 E-value=0.71 Score=39.61 Aligned_cols=35 Identities=9% Similarity=-0.029 Sum_probs=24.1
Q ss_pred CHHHHHHHHhhCCceEEEecccccccceeEecCCe
Q 027185 139 GQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQK 173 (227)
Q Consensus 139 G~~~~~~fl~~~~~~~iiRgH~~~~~G~~~~~~~~ 173 (227)
....+.+.+++.++++++-||.....-.....+++
T Consensus 181 ~~~~l~~ll~~~~v~~vl~GH~H~y~r~~p~~~~~ 215 (294)
T cd00839 181 MRAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGT 215 (294)
T ss_pred HHHHHHHHHHHhCCCEEEEccceeeEeechhhCCE
Confidence 34566777889999999999997654443333333
No 85
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=84.05 E-value=1.2 Score=35.37 Aligned_cols=36 Identities=19% Similarity=0.286 Sum_probs=21.7
Q ss_pred CccccCCCCCcHHHHHHHHhccccCCCeEEEEccCcccch
Q 027185 1 MGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQ 40 (227)
Q Consensus 1 LGDyVDRG~~s~evl~~l~~lk~~~p~~v~lLrGNHE~~~ 40 (227)
|||+.-.-..--+....+-+ -|.++++++|||+---
T Consensus 52 LGDl~~~~n~~~~a~~Iler----LnGrkhlv~GNhDk~~ 87 (186)
T COG4186 52 LGDLSSGANRERAAGLILER----LNGRKHLVPGNHDKCH 87 (186)
T ss_pred ecccccccchhhHHHHHHHH----cCCcEEEeeCCCCCCc
Confidence 67776443333333333322 3678999999999743
No 86
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=82.01 E-value=1.4 Score=36.25 Aligned_cols=13 Identities=23% Similarity=0.457 Sum_probs=10.7
Q ss_pred CeEEEEccCcccc
Q 027185 27 QRITILRGNHESR 39 (227)
Q Consensus 27 ~~v~lLrGNHE~~ 39 (227)
-.++.|.||||.-
T Consensus 99 i~~i~V~GNHDIG 111 (193)
T cd08164 99 TPLINIAGNHDVG 111 (193)
T ss_pred ceEEEECCcccCC
Confidence 3578999999984
No 87
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=76.58 E-value=3 Score=35.30 Aligned_cols=57 Identities=26% Similarity=0.440 Sum_probs=32.1
Q ss_pred cHHHHHHHHhccccCCCeEEEEccCcccchhhcccCcHHHHHHHhCChhhHHHHHHHHhcCccceeecCeEEEEeCCCCC
Q 027185 11 SVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSP 90 (227)
Q Consensus 11 s~evl~~l~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~f~~LPla~~i~~~~l~vHgGi~p 90 (227)
..|+..++-.++.. .+++++||||...-....++. .++.+++ .+ ++++++||--.+
T Consensus 85 ~~~~~~f~~~~~~~---evi~i~GNHD~~i~~~~~~~~----------------v~v~~~~----~i-~~~~~~HGh~~~ 140 (235)
T COG1407 85 KEEVREFLELLDER---EVIIIRGNHDNGIEEILPGFN----------------VEVVDEL----EI-GGLLFRHGHKEP 140 (235)
T ss_pred HHHHHHHHHHhccC---cEEEEeccCCCccccccccCC----------------ceeeeeE----Ee-cCEEEEeCCCCC
Confidence 34555555444432 499999999985433333221 1222222 23 479999998654
Q ss_pred C
Q 027185 91 S 91 (227)
Q Consensus 91 ~ 91 (227)
.
T Consensus 141 ~ 141 (235)
T COG1407 141 E 141 (235)
T ss_pred c
Confidence 3
No 88
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=76.55 E-value=2.4 Score=38.73 Aligned_cols=38 Identities=24% Similarity=0.463 Sum_probs=27.5
Q ss_pred CccccCCCCCc--HHHHHHHHhccccCCC----eEEEEccCccc
Q 027185 1 MGDYVDRGYYS--VETVTLLVALKVRYPQ----RITILRGNHES 38 (227)
Q Consensus 1 LGDyVDRG~~s--~evl~~l~~lk~~~p~----~v~lLrGNHE~ 38 (227)
|||++|-|..+ -|--.....+|..++. .+..+.||||-
T Consensus 100 LGDLfDeG~~~~~eEf~~~~~RfkkIf~~k~~~~~~~i~GNhDI 143 (410)
T KOG3662|consen 100 LGDLFDEGQWAGDEEFKKRYERFKKIFGRKGNIKVIYIAGNHDI 143 (410)
T ss_pred eccccccCccCChHHHHHHHHHHHHhhCCCCCCeeEEeCCcccc
Confidence 79999988764 3444445555555553 69999999997
No 89
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=75.30 E-value=2.5 Score=35.86 Aligned_cols=27 Identities=7% Similarity=0.007 Sum_probs=20.8
Q ss_pred HHHHHHHHhhCCceEEEecccccccce
Q 027185 140 QDISEQFNHTNNLKLIARAHQLVMDGF 166 (227)
Q Consensus 140 ~~~~~~fl~~~~~~~iiRgH~~~~~G~ 166 (227)
...+.+++++.++++++-||.....-+
T Consensus 190 ~~~l~~l~~~~~v~~vl~GH~H~~~~~ 216 (277)
T cd07378 190 VDRLLPLLKKYKVDAYLSGHDHNLQHI 216 (277)
T ss_pred HHHHHHHHHHcCCCEEEeCCcccceee
Confidence 356677888999999999998664433
No 90
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=69.27 E-value=9.8 Score=35.45 Aligned_cols=52 Identities=8% Similarity=0.089 Sum_probs=38.4
Q ss_pred eEEEecccccccceeEecCCeEEEEEcCCCCCCCCCCeEEEEEEeCC-CCeEEEEEec
Q 027185 153 KLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDC-RSHTFIQFEP 209 (227)
Q Consensus 153 ~~iiRgH~~~~~G~~~~~~~~~iTifSa~~y~~~~~N~~avl~i~~~-~~~~~~~~~~ 209 (227)
++++.||+.. .|+....+.+++..+|-+.... .+-++.|+.. ++..+..|..
T Consensus 420 Dv~~~Ghvh~-~g~~~y~gv~~vns~T~q~qTe----fqk~vni~p~~~~v~vv~~~~ 472 (481)
T COG1311 420 DVFHTGHVHK-FGTGVYEGVNLVNSGTWQEQTE----FQKMVNINPTPGNVPVVDFDS 472 (481)
T ss_pred cEEEEccccc-cceeEEeccceEEeeeecchhc----cceEEEecCcccceeEEeccc
Confidence 7788999987 7998888889999988887642 3556666644 5666666665
No 91
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=65.17 E-value=7.1 Score=33.60 Aligned_cols=41 Identities=29% Similarity=0.387 Sum_probs=24.7
Q ss_pred CccccCCCCCcH--H------HHHHHHhccccCCC-eEEEEccCcccchh
Q 027185 1 MGDYVDRGYYSV--E------TVTLLVALKVRYPQ-RITILRGNHESRQI 41 (227)
Q Consensus 1 LGDyVDRG~~s~--e------vl~~l~~lk~~~p~-~v~lLrGNHE~~~~ 41 (227)
.||+|+.+.... + .-.+.-.++..+|. .|+...||||....
T Consensus 75 tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GNHD~~p~ 124 (296)
T cd00842 75 TGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGNHDSYPV 124 (296)
T ss_pred cCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCCCCCCcc
Confidence 499999886531 1 11122223433332 59999999998654
No 92
>PLN02533 probable purple acid phosphatase
Probab=52.91 E-value=13 Score=34.29 Aligned_cols=26 Identities=12% Similarity=0.165 Sum_probs=21.0
Q ss_pred HHHHHHHHhhCCceEEEecccccccc
Q 027185 140 QDISEQFNHTNNLKLIARAHQLVMDG 165 (227)
Q Consensus 140 ~~~~~~fl~~~~~~~iiRgH~~~~~G 165 (227)
.+.++.++++.++++++-||...-+.
T Consensus 311 r~~le~Ll~~~~VdlvlsGH~H~YeR 336 (427)
T PLN02533 311 KESMETLLYKARVDLVFAGHVHAYER 336 (427)
T ss_pred HHHHHHHHHHhCCcEEEecceecccc
Confidence 35678888999999999999976443
No 93
>KOG3339 consensus Predicted glycosyltransferase [General function prediction only]
Probab=51.21 E-value=61 Score=26.62 Aligned_cols=80 Identities=19% Similarity=0.260 Sum_probs=56.4
Q ss_pred cCCCCCcHHHHHHHHhccccCCCeEEEEccCcccchhhcccCcH----------------HHHHHHhCChhhHHHHHHHH
Q 027185 5 VDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFY----------------DECLRKYGNANIWKIFTDLF 68 (227)
Q Consensus 5 VDRG~~s~evl~~l~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~----------------~e~~~~~g~~~~~~~~~~~f 68 (227)
..-|-+.-|++.++-+|+..|-.+.++ .|+-|.|..+....|. .|.-+.| -..+|..+...+
T Consensus 45 lGSGGHT~EMlrLl~~l~~~y~~r~yI-~a~tD~mS~~k~~~F~~~~a~~~a~~~~ipRsReVgQS~-ltSv~Tti~all 122 (211)
T KOG3339|consen 45 LGSGGHTGEMLRLLEALQDLYSPRSYI-AADTDEMSEQKARSFELSLAHCKAKNYEIPRSREVGQSW-LTSVFTTIWALL 122 (211)
T ss_pred EcCCCcHHHHHHHHHHHHhhcCceEEE-EecCchhhHHHHHhhhccccccchhheecchhhhhhhhh-hhhHHHHHHHHH
Confidence 356888999999999999888766655 8999998876654433 2333333 245667777777
Q ss_pred hcCccceeecCeEEEEeC
Q 027185 69 DYFPLTALVESEIFCLHG 86 (227)
Q Consensus 69 ~~LPla~~i~~~~l~vHg 86 (227)
-++++...+--.++.+-|
T Consensus 123 ~s~~lv~RirPdlil~NG 140 (211)
T KOG3339|consen 123 QSFVLVWRIRPDLILCNG 140 (211)
T ss_pred HHheEEEecCCCEEEECC
Confidence 778887777656666666
No 94
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=50.60 E-value=35 Score=33.00 Aligned_cols=36 Identities=28% Similarity=0.395 Sum_probs=31.2
Q ss_pred CccccCCCCCcHHHHHHHHhccccCCCeEEEEccCcccchh
Q 027185 1 MGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQI 41 (227)
Q Consensus 1 LGDyVDRG~~s~evl~~l~~lk~~~p~~v~lLrGNHE~~~~ 41 (227)
+||+-||||..-.++..|+.. + +|=+-.||||...|
T Consensus 191 vGDIyDRGp~pd~ImD~Lm~~----h-svDIQWGNHDIlWM 226 (640)
T PF06874_consen 191 VGDIYDRGPRPDKIMDRLMNY----H-SVDIQWGNHDILWM 226 (640)
T ss_pred cccccCCCCChhHHHHHHhcC----C-CccccccchHHHHH
Confidence 699999999999999999854 3 78899999998554
No 95
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=49.27 E-value=13 Score=30.49 Aligned_cols=22 Identities=5% Similarity=-0.088 Sum_probs=17.1
Q ss_pred CHHHHHHHHhhCCceEEEeccc
Q 027185 139 GQDISEQFNHTNNLKLIARAHQ 160 (227)
Q Consensus 139 G~~~~~~fl~~~~~~~iiRgH~ 160 (227)
...++.++++...++..+-||=
T Consensus 175 t~~~~sevlee~rv~~~lyGHl 196 (230)
T COG1768 175 TPGPFSEVLEEGRVSKCLYGHL 196 (230)
T ss_pred CCcchHHHHhhcceeeEEeeec
Confidence 3456788888888888888874
No 96
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=47.91 E-value=52 Score=28.21 Aligned_cols=50 Identities=16% Similarity=0.182 Sum_probs=34.6
Q ss_pred eEEEecccccccceeEec--CCeEEEEEcCCCCCCCCCCeEEEEEEe-CCCCeEEEEE
Q 027185 153 KLIARAHQLVMDGFNWAH--EQKVVTIFSAPNYCYRCGNMASILEVD-DCRSHTFIQF 207 (227)
Q Consensus 153 ~~iiRgH~~~~~G~~~~~--~~~~iTifSa~~y~~~~~N~~avl~i~-~~~~~~~~~~ 207 (227)
..++-|||+. -|.+... +++-+.+.|.|.|.. .|.++.++ ++++++.++|
T Consensus 205 hVyf~Gnq~~-f~t~~~~~~~~~~v~lv~vP~Fs~----t~~~vlvdl~tLe~~~v~f 257 (257)
T cd07387 205 HVYFAGNQPK-FGTKLVEGEEGQRVLLVCVPSFSK----TGTAVLVNLRTLECEPISF 257 (257)
T ss_pred CEEEeCCCcc-eeeeEEEcCCCCeEEEEEeCCcCc----CCEEEEEECCcCcEEEEeC
Confidence 6778899876 4555443 367788888899842 56666666 7788877765
No 97
>PF09637 Med18: Med18 protein; InterPro: IPR019095 The Mediator complex is a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. On recruitment the Mediator complex unfolds to an extended conformation and partially surrounds RNA polymerase II, specifically interacting with the unphosphorylated form of the C-terminal domain (CTD) of RNA polymerase II. The Mediator complex dissociates from the RNA polymerase II holoenzyme and stays at the promoter when transcriptional elongation begins. The Mediator complex is composed of at least 31 subunits: MED1, MED4, MED6, MED7, MED8, MED9, MED10, MED11, MED12, MED13, MED13L, MED14, MED15, MED16, MED17, MED18, MED19, MED20, MED21, MED22, MED23, MED24, MED25, MED26, MED27, MED29, MED30, MED31, CCNC, CDK8 and CDC2L6/CDK11. The subunits form at least three structurally distinct submodules. The head and the middle modules interact directly with RNA polymerase II, whereas the elongated tail module interacts with gene-specific regulatory proteins. Mediator containing the CDK8 module is less active than Mediator lacking this module in supporting transcriptional activation. The head module contains: MED6, MED8, MED11, SRB4/MED17, SRB5/MED18, ROX3/MED19, SRB2/MED20 and SRB6/MED22. The middle module contains: MED1, MED4, NUT1/MED5, MED7, CSE2/MED9, NUT2/MED10, SRB7/MED21 and SOH1/MED31. CSE2/MED9 interacts directly with MED4. The tail module contains: MED2, PGD1/MED3, RGR1/MED14, GAL11/MED15 and SIN4/MED16. The CDK8 module contains: MED12, MED13, CCNC and CDK8. Individual preparations of the Mediator complex lacking one or more distinct subunits have been variously termed ARC, CRSP, DRIP, PC2, SMCC and TRAP. Med18 is one subunit of the Mediator complex and a component of the head module that is involved in stimulating basal RNA polymerase II (PolII) transcription. Med18 consists of an eight-stranded beta-barrel with a central pore and three flanking helices. It complexes with Med8 and Med20 proteins by forming a heterodimer of two-fold symmetry with Med20 and binding the C-terminal alpha-helix region of Med8 across the top of its barrel. This complex creates a multipartite TBP-binding site that can be modulated by transcriptional activators []. ; GO: 0001104 RNA polymerase II transcription cofactor activity, 0006357 regulation of transcription from RNA polymerase II promoter, 0016592 mediator complex; PDB: 2HZM_F 2HZS_H 3RJ1_E 3C0T_A.
Probab=46.67 E-value=28 Score=29.61 Aligned_cols=70 Identities=13% Similarity=0.161 Sum_probs=44.4
Q ss_pred CHHHHHHHHhhCCceEEEecccccccceeEecCCeEEEEEcCCCCCCCCCC----eEEEEEEeCCCCeEEEEEecCCC
Q 027185 139 GQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGN----MASILEVDDCRSHTFIQFEPAPR 212 (227)
Q Consensus 139 G~~~~~~fl~~~~~~~iiRgH~~~~~G~~~~~~~~~iTifSa~~y~~~~~N----~~avl~i~~~~~~~~~~~~~~~~ 212 (227)
....+.+||+.+|... -+|.+.+||.|.+++-.|+||---.... .++ .-+.-.++..+..-+..+-.++.
T Consensus 139 ~~~~~~~fl~~lGy~~---~~Eyv~~G~~F~~g~i~I~l~ri~~~~~-~~~~~~~~~~l~~~d~s~~~lv~a~v~v~~ 212 (250)
T PF09637_consen 139 TSGSLLSFLNELGYRF---DYEYVVEGYRFFKGDIVIELFRIFKVPP-PGQYPPPFDKLKPLDPSGSWLVEASVNVPD 212 (250)
T ss_dssp SSSSHHHHHHHTTEEE---EEEEEEEEEEEEECCEEEEEEEEEEEET-TCCE---SS-EEECTTTTEEEEEEEEEEST
T ss_pred CCCCHHHHHHHcCCce---EEEEEEEEEEEEECCEEEEEEEEEecCC-CCCCCCCcccCCccCCCCCEEEEEEEEccC
Confidence 5677889999999765 6899999999999887888774322211 111 12344445555555555444443
No 98
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=43.52 E-value=18 Score=30.63 Aligned_cols=33 Identities=36% Similarity=0.351 Sum_probs=20.7
Q ss_pred CccccCCCCCc-----HHHHHHHHhccccCCCeEEEEccCccc
Q 027185 1 MGDYVDRGYYS-----VETVTLLVALKVRYPQRITILRGNHES 38 (227)
Q Consensus 1 LGDyVDRG~~s-----~evl~~l~~lk~~~p~~v~lLrGNHE~ 38 (227)
-||+++.++.+ ..++..+-.+.. -+...||||.
T Consensus 45 ~GD~~~g~~~~~~~~g~~~~~~l~~l~~-----d~~~~GNHef 82 (257)
T cd07406 45 SGDVLSPSLLSTATKGKQMVPVLNALGV-----DLACFGNHEF 82 (257)
T ss_pred CCCccCCccchhhcCCccHHHHHHhcCC-----cEEeeccccc
Confidence 38999877532 345555544432 3457899996
No 99
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=40.36 E-value=25 Score=29.29 Aligned_cols=20 Identities=15% Similarity=0.320 Sum_probs=14.3
Q ss_pred HHHHhh-CCceEEEecccccc
Q 027185 144 EQFNHT-NNLKLIARAHQLVM 163 (227)
Q Consensus 144 ~~fl~~-~~~~~iiRgH~~~~ 163 (227)
.++++. .++++|+-||+...
T Consensus 186 ~~la~~~~giDlvlggH~H~~ 206 (252)
T cd00845 186 EELAEEVPGIDVILGGHTHHL 206 (252)
T ss_pred HHHHhcCCCccEEEcCCcCcc
Confidence 445444 58999999988653
No 100
>PF05413 Peptidase_C34: Putative closterovirus papain-like endopeptidase; InterPro: IPR008744 RNA-directed RNA polymerase (RdRp) (2.7.7.48 from EC) is an essential protein encoded in the genomes of all RNA containing viruses with no DNA stage [, ]. It catalyses synthesis of the RNA strand complementary to a given RNA template, but the precise molecular mechanism remains unclear. The postulated RNA replication process is a two-step mechanism. First, the initiation step of RNA synthesis begins at or near the 3' end of the RNA template by means of a primer-independent (de novo) mechanism. The de novo initiation consists in the addition of a nucleotide tri-phosphate (NTP) to the 3'-OH of the first initiating NTP. During the following so-called elongation phase, this nucleotidyl transfer reaction is repeated with subsequent NTPs to generate the complementary RNA product []. All the RNA-directed RNA polymerases, and many DNA-directed polymerases, employ a fold whose organisation has been likened to the shape of a right hand with three subdomains termed fingers, palm and thumb []. Only the catalytic palm subdomain, composed of a four-stranded antiparallel beta-sheet with two alpha-helices, is well conserved among all of these enzymes. In RdRp, the palm subdomain comprises three well conserved motifs (A, B and C). Motif A (D-x(4,5)-D) and motif C (GDD) are spatially juxtaposed; the Asp residues of these motifs are implied in the binding of Mg2+ and/or Mn2+. The Asn residue of motif B is involved in selection of ribonucleoside triphosphates over dNTPs and thus determines whether RNA is synthesised rather than DNA []. The domain organisation [] and the 3D structure of the catalytic centre of a wide range of RdPp's, even those with a low overall sequence homology, are conserved. The catalytic centre is formed by several motifs containing a number of conserved amino acid residues. There are 4 superfamilies of viruses that cover all RNA containing viruses with no DNA stage: Viruses containing positive-strand RNA or double-strand RNA, except retroviruses and Birnaviridae: viral RNA-directed RNA polymerases including all positive-strand RNA viruses with no DNA stage, double-strand RNA viruses, and the Cystoviridae, Reoviridae, Hypoviridae, Partitiviridae, Totiviridae families. Mononegavirales (negative-strand RNA viruses with non-segmented genomes). Negative-strand RNA viruses with segmented genomes, i.e. Orthomyxoviruses (including influenza A, B, and C viruses, Thogotoviruses, and the infectious salmon anemia virus), Arenaviruses, Bunyaviruses, Hantaviruses, Nairoviruses, Phleboviruses, Tenuiviruses and Tospoviruses. Birnaviridae family of dsRNA viruses. The RNA-directed RNA polymerases in the first of the above superfamilies can be divided into the following three subgroups: All positive-strand RNA eukaryotic viruses with no DNA stage. All RNA-containing bacteriophages -there are two families of RNA-containing bacteriophages: Leviviridae (positive ssRNA phages) and Cystoviridae (dsRNA phages). Reoviridae family of dsRNA viruses. This signature is found in the RNA-direct RNA polymerase of apple chlorotic leaf spot virus and cherry mottle virus.; GO: 0003723 RNA binding, 0003968 RNA-directed RNA polymerase activity, 0005524 ATP binding, 0019079 viral genome replication
Probab=30.65 E-value=23 Score=24.75 Aligned_cols=9 Identities=56% Similarity=0.778 Sum_probs=7.1
Q ss_pred EEEEccCcc
Q 027185 29 ITILRGNHE 37 (227)
Q Consensus 29 v~lLrGNHE 37 (227)
=.+|||||=
T Consensus 80 r~~LRGNHF 88 (92)
T PF05413_consen 80 RMLLRGNHF 88 (92)
T ss_pred heeecccce
Confidence 368999993
No 101
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=30.29 E-value=44 Score=28.32 Aligned_cols=19 Identities=11% Similarity=0.205 Sum_probs=13.0
Q ss_pred HHHHhh-CCceEEEeccccc
Q 027185 144 EQFNHT-NNLKLIARAHQLV 162 (227)
Q Consensus 144 ~~fl~~-~~~~~iiRgH~~~ 162 (227)
.+..++ .++++|+-||+..
T Consensus 199 ~~la~~~~~iDlilgGH~H~ 218 (264)
T cd07411 199 VELAERVPGIDVILSGHTHE 218 (264)
T ss_pred HHHHhcCCCCcEEEeCcccc
Confidence 344444 5799999998753
No 102
>smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.
Probab=30.16 E-value=1.2e+02 Score=25.14 Aligned_cols=33 Identities=15% Similarity=0.304 Sum_probs=25.9
Q ss_pred hCCceEEEecccccccceeEecCCeEEEEEcCCCC
Q 027185 149 TNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNY 183 (227)
Q Consensus 149 ~~~~~~iiRgH~~~~~G~~~~~~~~~iTifSa~~y 183 (227)
..|+++||-+|..+..+++.. ++++| +||-=|+
T Consensus 203 ~~G~DvIiG~H~H~~~~~e~~-~~~~I-~YslGNf 235 (239)
T smart00854 203 DAGADVVIGHHPHVLQPIEIY-KGKLI-AYSLGNF 235 (239)
T ss_pred HcCCCEEEcCCCCcCCceEEE-CCEEE-EEccccc
Confidence 368999999999998899876 45655 6776555
No 103
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=29.76 E-value=39 Score=28.73 Aligned_cols=21 Identities=14% Similarity=0.159 Sum_probs=15.7
Q ss_pred HHHHHhh-CCceEEEecccccc
Q 027185 143 SEQFNHT-NNLKLIARAHQLVM 163 (227)
Q Consensus 143 ~~~fl~~-~~~~~iiRgH~~~~ 163 (227)
..++.++ .++++||-||+.+.
T Consensus 209 ~~~la~~~~~vD~IlgGHsH~~ 230 (277)
T cd07410 209 AYELAEEVPGIDAILTGHQHRR 230 (277)
T ss_pred HHHHHhcCCCCcEEEeCCCccc
Confidence 3456665 69999999998653
No 104
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=29.62 E-value=67 Score=27.53 Aligned_cols=27 Identities=22% Similarity=0.203 Sum_probs=23.8
Q ss_pred eeCHHHHHHHHhhCCceEEEecccccc
Q 027185 137 TFGQDISEQFNHTNNLKLIARAHQLVM 163 (227)
Q Consensus 137 ~fG~~~~~~fl~~~~~~~iiRgH~~~~ 163 (227)
.-|...+.++++...-++.+-||-.+.
T Consensus 202 ~~Gs~~~~~ll~~lkPryhf~gH~H~~ 228 (262)
T cd00844 202 TLGSPAAEELLKHLKPRYWFSAHLHVK 228 (262)
T ss_pred CCCCHHHHHHHHHhCCCEEEEecCCcc
Confidence 559999999999999999999997653
No 105
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=28.68 E-value=1.1e+02 Score=25.97 Aligned_cols=25 Identities=12% Similarity=0.220 Sum_probs=19.8
Q ss_pred CeeeeCHHHHHHHHhhCCceEEEec
Q 027185 134 AGYTFGQDISEQFNHTNNLKLIARA 158 (227)
Q Consensus 134 ~g~~fG~~~~~~fl~~~~~~~iiRg 158 (227)
.+++.||+--...-+..+..+|+-|
T Consensus 189 d~vI~GH~Hr~ai~~i~~~~yi~lG 213 (237)
T COG2908 189 DGVIHGHTHRPAIHNIPGITYINLG 213 (237)
T ss_pred CEEEecCcccHhhccCCCceEEecC
Confidence 4578999888888777777777776
No 106
>COG3433 Aryl carrier domain [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=28.25 E-value=25 Score=24.14 Aligned_cols=22 Identities=27% Similarity=0.452 Sum_probs=18.9
Q ss_pred cccCCCCCcHHHHHHHHhcccc
Q 027185 3 DYVDRGYYSVETVTLLVALKVR 24 (227)
Q Consensus 3 DyVDRG~~s~evl~~l~~lk~~ 24 (227)
|+||.|-+|+.++.++-.++..
T Consensus 23 NLi~~GLDSiR~M~L~~~wR~~ 44 (74)
T COG3433 23 NLIDYGLDSIRMMALLERWRKR 44 (74)
T ss_pred hHHHhchhHHHHHHHHHHHHHc
Confidence 6899999999999998887653
No 107
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=26.85 E-value=75 Score=29.84 Aligned_cols=59 Identities=20% Similarity=0.222 Sum_probs=39.4
Q ss_pred CHHHHHHHHhhCCce----EEEeccccccc--cee-EecCCeEEEEEc--CCCCCCCCCCeEEEEEEe
Q 027185 139 GQDISEQFNHTNNLK----LIARAHQLVMD--GFN-WAHEQKVVTIFS--APNYCYRCGNMASILEVD 197 (227)
Q Consensus 139 G~~~~~~fl~~~~~~----~iiRgH~~~~~--G~~-~~~~~~~iTifS--a~~y~~~~~N~~avl~i~ 197 (227)
.++...+.|+..|++ .||-||+||.+ |=. .-++|++|.|=. |..|....+=+|-.|..+
T Consensus 514 de~ic~kil~eFGLdpe~ghiINGHtPVke~~GE~PIKAngKliVIDGGFskAYqs~TgiAGYTllYN 581 (648)
T COG3855 514 DEEICRKILEEFGLDPEGGHIINGHTPVKEKNGENPIKANGKLIVIDGGFSKAYQSTTGIAGYTLLYN 581 (648)
T ss_pred hHHHHHHHHHHhCCCcccCceecCCCcccccCCCCCccCCCeEEEEcCchhhhhhcccccceeEeeec
Confidence 356667888888876 89999999985 433 356899999843 234655444445455443
No 108
>PF10083 DUF2321: Uncharacterized protein conserved in bacteria (DUF2321); InterPro: IPR016891 This entry is represented by Bacteriophage 'Lactobacillus prophage Lj928', Orf-Ljo1454. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=26.05 E-value=23 Score=28.01 Aligned_cols=45 Identities=24% Similarity=0.498 Sum_probs=28.4
Q ss_pred CHHHHHHHHhhCC---------ceEEEecccccccceeEecCCeEEEEEcCCCCCCCCCC
Q 027185 139 GQDISEQFNHTNN---------LKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGN 189 (227)
Q Consensus 139 G~~~~~~fl~~~~---------~~~iiRgH~~~~~G~~~~~~~~~iTifSa~~y~~~~~N 189 (227)
++...+.||.+-| ++.=|||+-.++..+.+..+ +.+|.||.+++.
T Consensus 23 ~p~~~~~fC~kCG~~tI~~Cp~C~~~IrG~y~v~gv~~~g~~------~~~PsYC~~CGk 76 (158)
T PF10083_consen 23 NPELREKFCSKCGAKTITSCPNCSTPIRGDYHVEGVFGLGGH------YEAPSYCHNCGK 76 (158)
T ss_pred CchHHHHHHHHhhHHHHHHCcCCCCCCCCceecCCeeeeCCC------CCCChhHHhCCC
Confidence 4555666666655 55558998777544444222 459999976654
No 109
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=25.28 E-value=53 Score=27.67 Aligned_cols=15 Identities=20% Similarity=0.257 Sum_probs=11.9
Q ss_pred CCceEEEeccccccc
Q 027185 150 NNLKLIARAHQLVMD 164 (227)
Q Consensus 150 ~~~~~iiRgH~~~~~ 164 (227)
.+++.||-||+....
T Consensus 200 ~giDvIigGH~H~~~ 214 (257)
T cd07408 200 TGIDLIIDGHSHTTI 214 (257)
T ss_pred CCceEEEeCCCcccc
Confidence 589999999886643
No 110
>cd01580 AcnA_IRP_Swivel Aconitase A swivel domain. This is the major form of the TCA cycle enzyme aconitate hydratase, also known as aconitase and citrate hydro-lyase. It includes bacterial and archaeal aconitase A, and the eukaryotic cytosolic form of aconitase. This group also includes sequences that have been shown to act as an iron-responsive element (IRE) binding protein in animals and may have the same role in other eukaryotes. This is the aconitase-like swivel domain, which is believed to undergo swivelling conformational change in the enzyme mechanism.
Probab=25.18 E-value=27 Score=28.02 Aligned_cols=13 Identities=31% Similarity=0.243 Sum_probs=10.1
Q ss_pred eEEEEccCcccch
Q 027185 28 RITILRGNHESRQ 40 (227)
Q Consensus 28 ~v~lLrGNHE~~~ 40 (227)
..=.=|||||.|+
T Consensus 39 syg~rRgnhevm~ 51 (171)
T cd01580 39 SYGSRRGNDEVMM 51 (171)
T ss_pred ccccccCCceEee
Confidence 3447799999986
No 111
>PF13258 DUF4049: Domain of unknown function (DUF4049)
Probab=24.48 E-value=39 Score=28.80 Aligned_cols=58 Identities=17% Similarity=0.343 Sum_probs=33.3
Q ss_pred CeEEEEccCcccchhhcccCcHHHHHH-HhCChhhHHHHHHHHhcCccceeec-CeEEEEeCCCCCC
Q 027185 27 QRITILRGNHESRQITQVYGFYDECLR-KYGNANIWKIFTDLFDYFPLTALVE-SEIFCLHGGLSPS 91 (227)
Q Consensus 27 ~~v~lLrGNHE~~~~~~~~gf~~e~~~-~~g~~~~~~~~~~~f~~LPla~~i~-~~~l~vHgGi~p~ 91 (227)
++|++|.||||.-. +..| ...+.. +....+-| ..+..+|++-.-. .+++..|-||-.+
T Consensus 128 knvvvlagnhein~-ngny--~arlanhkls~gDTY----nlIKtldVC~YD~erkvltsHHGIird 187 (318)
T PF13258_consen 128 KNVVVLAGNHEINF-NGNY--MARLANHKLSAGDTY----NLIKTLDVCNYDPERKVLTSHHGIIRD 187 (318)
T ss_pred cceEEEecCceecc-CchH--HHHHhhCCCCccchh----hccccccccccCcchhhhhcccCceec
Confidence 58999999999843 2221 111111 11112222 4567788886644 3688899998543
No 112
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=24.04 E-value=1.1e+02 Score=25.22 Aligned_cols=36 Identities=25% Similarity=0.246 Sum_probs=27.0
Q ss_pred CccccCCCCCcHHHHHHHHhccccCCCeEEEEccCcccc
Q 027185 1 MGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESR 39 (227)
Q Consensus 1 LGDyVDRG~~s~evl~~l~~lk~~~p~~v~lLrGNHE~~ 39 (227)
.||++++++.+.+++..+..+ .+..+++++||||..
T Consensus 39 ~GDl~~~~~~~~~~~~~l~~~---~~~pv~~v~GNHD~~ 74 (239)
T TIGR03729 39 AGDISNDFQRSLPFIEKLQEL---KGIKVTFNAGNHDML 74 (239)
T ss_pred CCccccchhhHHHHHHHHHHh---cCCcEEEECCCCCCC
Confidence 599999987777777666553 223599999999974
No 113
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=24.02 E-value=3.6e+02 Score=22.70 Aligned_cols=37 Identities=19% Similarity=0.189 Sum_probs=22.2
Q ss_pred CccccCCCCCcHHHHHHHHhccccCCCeEEEEccCcccc
Q 027185 1 MGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESR 39 (227)
Q Consensus 1 LGDyVDRG~~s~evl~~l~~lk~~~p~~v~lLrGNHE~~ 39 (227)
.||++|.|. .+-...+...-...+..++.++||||..
T Consensus 62 tGDl~~~~~--~~~~~~~~~~l~~l~~Pv~~v~GNHD~~ 98 (275)
T PRK11148 62 TGDLAQDHS--SEAYQHFAEGIAPLRKPCVWLPGNHDFQ 98 (275)
T ss_pred CCCCCCCCC--HHHHHHHHHHHhhcCCcEEEeCCCCCCh
Confidence 499999884 2222222221112234599999999973
No 114
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=23.93 E-value=82 Score=26.58 Aligned_cols=35 Identities=26% Similarity=0.444 Sum_probs=19.9
Q ss_pred ccCCCCC----CCCCCcCCC-CCeeeeCHH----HHHHHHhhCC
Q 027185 117 LWSDPDD----RCGWGISPR-GAGYTFGQD----ISEQFNHTNN 151 (227)
Q Consensus 117 lWsdP~~----~~~~~~~~r-g~g~~fG~~----~~~~fl~~~~ 151 (227)
-|.+|.+ +.+|..+.. ..+..+|.+ .+.+.+++||
T Consensus 60 ~~~a~~~~~~~~~~Wf~~n~~~~~~~~~~eesl~yl~~~i~enG 103 (230)
T KOG2551|consen 60 KFDAPPDVEQNRYGWFSNNEASFTEYFGFEESLEYLEDYIKENG 103 (230)
T ss_pred cccCCcccccchhhhhcccccccccccChHHHHHHHHHHHHHhC
Confidence 4666652 356655444 444556644 3566777776
No 115
>COG4119 Predicted NTP pyrophosphohydrolase [DNA replication, recombination, and repair / General function prediction only]
Probab=23.74 E-value=2.5e+02 Score=21.66 Aligned_cols=37 Identities=19% Similarity=0.142 Sum_probs=21.7
Q ss_pred HHHHHHhhCCceEEEecccccccceeEecCCeEEEEEcCC
Q 027185 142 ISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAP 181 (227)
Q Consensus 142 ~~~~fl~~~~~~~iiRgH~~~~~G~~~~~~~~~iTifSa~ 181 (227)
+-.+|.+..++.. -|- ...-|-....+|||+|.|+--
T Consensus 55 ArREf~EE~Gi~v--dGP-~~~lG~~kQ~GGKvVta~~ve 91 (161)
T COG4119 55 ARREFSEEIGICV--DGP-RIDLGSLKQSGGKVVTAFGVE 91 (161)
T ss_pred HHHHhhhhhceee--cCc-hhhhhhhccCCCcEEEEEeee
Confidence 3457777776643 221 122343345589999999864
No 116
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=23.33 E-value=59 Score=29.74 Aligned_cols=23 Identities=9% Similarity=0.011 Sum_probs=19.0
Q ss_pred HHHHHHhhCCceEEEeccccccc
Q 027185 142 ISEQFNHTNNLKLIARAHQLVMD 164 (227)
Q Consensus 142 ~~~~fl~~~~~~~iiRgH~~~~~ 164 (227)
.+.-+|+++++++.|-||+...+
T Consensus 239 ~L~PLL~ky~VdlYisGHDH~lq 261 (394)
T PTZ00422 239 YLLPLLKDAQVDLYISGYDRNME 261 (394)
T ss_pred HHHHHHHHcCcCEEEEccccceE
Confidence 56677899999999999996543
No 117
>COG3168 PilP Tfp pilus assembly protein PilP [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=21.69 E-value=4.2e+02 Score=21.12 Aligned_cols=46 Identities=13% Similarity=0.104 Sum_probs=27.8
Q ss_pred CeEEEEEcCCCCCCCCCCeEEEEEEeCCCCeEEEEEecCCCCCCCCCCCC
Q 027185 172 QKVVTIFSAPNYCYRCGNMASILEVDDCRSHTFIQFEPAPRRGEPDVTRR 221 (227)
Q Consensus 172 ~~~iTifSa~~y~~~~~N~~avl~i~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (227)
+++.+|= .-+|.| .|.|-|.+|+++ .+.+.-.-|.....+.+.+++
T Consensus 118 ~~v~~V~-vG~YlG--qN~GrV~rI~d~-~i~l~Elv~dG~g~W~eR~~~ 163 (170)
T COG3168 118 GGVYRVR-VGQYLG--QNYGRVVRITDD-SIVLNELVPDGTGNWLERPAE 163 (170)
T ss_pred CceEEEe-eccEee--ccCceEEEecCC-eEEeeeeccCcccchhhcchh
Confidence 3444442 224655 689999999765 566666666555555555444
Done!