Query 027187
Match_columns 227
No_of_seqs 350 out of 1496
Neff 6.9
Searched_HMMs 46136
Date Fri Mar 29 06:15:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027187.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/027187hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0484 DnaJ DnaJ-class molecu 99.9 2.7E-27 5.7E-32 214.3 8.0 97 75-182 3-100 (371)
2 KOG0713 Molecular chaperone (D 99.9 5.2E-24 1.1E-28 189.1 6.6 73 73-151 13-85 (336)
3 PRK14288 chaperone protein Dna 99.9 2.1E-22 4.7E-27 184.4 7.1 70 76-151 3-72 (369)
4 PRK14296 chaperone protein Dna 99.9 4.1E-22 8.9E-27 182.7 6.5 69 75-150 3-71 (372)
5 KOG0712 Molecular chaperone (D 99.8 1.5E-21 3.2E-26 174.9 6.7 69 75-152 3-71 (337)
6 PRK14286 chaperone protein Dna 99.8 2.7E-21 5.8E-26 177.3 6.0 99 75-183 3-106 (372)
7 PRK14287 chaperone protein Dna 99.8 7.9E-21 1.7E-25 174.2 8.0 96 75-183 3-98 (371)
8 PRK14285 chaperone protein Dna 99.8 1E-20 2.2E-25 173.1 5.9 101 76-183 3-106 (365)
9 PRK14298 chaperone protein Dna 99.8 2.3E-20 5E-25 171.4 7.7 99 75-183 4-102 (377)
10 PRK14278 chaperone protein Dna 99.8 2.2E-20 4.8E-25 171.6 7.2 96 76-183 3-98 (378)
11 PRK14276 chaperone protein Dna 99.8 1.8E-20 3.8E-25 172.3 6.6 100 75-183 3-106 (380)
12 PRK14294 chaperone protein Dna 99.8 2.2E-20 4.7E-25 171.0 7.1 98 75-182 3-101 (366)
13 PRK14301 chaperone protein Dna 99.8 3.3E-20 7.1E-25 170.2 7.5 98 75-182 3-102 (373)
14 PTZ00037 DnaJ_C chaperone prot 99.8 3.1E-20 6.8E-25 172.5 7.3 67 74-150 26-92 (421)
15 PRK14279 chaperone protein Dna 99.8 3.1E-20 6.7E-25 171.3 6.7 69 75-149 8-76 (392)
16 PRK14291 chaperone protein Dna 99.8 5.5E-20 1.2E-24 169.2 7.0 70 75-151 2-71 (382)
17 PRK14282 chaperone protein Dna 99.8 1.5E-19 3.2E-24 165.7 7.7 72 75-151 3-74 (369)
18 PRK10767 chaperone protein Dna 99.8 1.3E-19 2.9E-24 166.1 6.8 71 75-151 3-73 (371)
19 PRK14283 chaperone protein Dna 99.8 3.2E-19 6.9E-24 163.9 7.4 69 75-150 4-72 (378)
20 PRK14277 chaperone protein Dna 99.8 3.5E-19 7.6E-24 164.1 7.7 70 75-150 4-73 (386)
21 PRK14297 chaperone protein Dna 99.8 4.1E-19 8.9E-24 163.3 7.3 71 75-151 3-73 (380)
22 KOG0691 Molecular chaperone (D 99.8 5.6E-19 1.2E-23 156.5 7.7 75 75-155 4-78 (296)
23 PRK14299 chaperone protein Dna 99.8 4.8E-19 1E-23 157.6 7.2 69 75-150 3-71 (291)
24 PRK14290 chaperone protein Dna 99.8 5E-19 1.1E-23 162.0 7.4 71 76-151 3-73 (365)
25 KOG0716 Molecular chaperone (D 99.8 3.7E-19 8E-24 153.9 5.9 69 75-149 30-98 (279)
26 TIGR02349 DnaJ_bact chaperone 99.8 3.8E-19 8.3E-24 162.0 6.2 97 77-183 1-101 (354)
27 PF00226 DnaJ: DnaJ domain; I 99.8 4.1E-19 8.9E-24 123.2 4.9 64 77-145 1-64 (64)
28 PRK14280 chaperone protein Dna 99.8 6.2E-19 1.3E-23 161.9 7.5 70 75-151 3-72 (376)
29 PRK14295 chaperone protein Dna 99.8 6.1E-19 1.3E-23 162.6 7.3 70 75-150 8-81 (389)
30 PRK14284 chaperone protein Dna 99.8 6.6E-19 1.4E-23 162.5 7.4 69 76-150 1-69 (391)
31 PRK14281 chaperone protein Dna 99.8 1.1E-18 2.4E-23 161.3 7.1 69 76-150 3-71 (397)
32 PRK14293 chaperone protein Dna 99.8 1.6E-18 3.4E-23 159.2 7.8 68 76-150 3-70 (374)
33 KOG0717 Molecular chaperone (D 99.7 1.2E-18 2.6E-23 159.7 5.9 70 73-147 5-74 (508)
34 KOG0715 Molecular chaperone (D 99.7 1.7E-18 3.8E-23 153.7 6.6 70 75-151 42-111 (288)
35 KOG0719 Molecular chaperone (D 99.7 3.2E-18 6.8E-23 145.3 7.2 87 74-164 12-100 (264)
36 KOG0718 Molecular chaperone (D 99.7 1.8E-18 3.8E-23 158.8 5.6 77 74-153 7-83 (546)
37 PTZ00341 Ring-infected erythro 99.7 7.6E-18 1.6E-22 166.0 9.9 74 72-152 569-642 (1136)
38 PRK14289 chaperone protein Dna 99.7 3.9E-18 8.6E-23 157.1 7.3 70 75-150 4-73 (386)
39 PRK14300 chaperone protein Dna 99.7 5E-18 1.1E-22 155.8 6.8 68 76-150 3-70 (372)
40 PRK14292 chaperone protein Dna 99.7 8.6E-18 1.9E-22 154.1 7.1 68 76-150 2-69 (371)
41 PRK10266 curved DNA-binding pr 99.7 8.9E-18 1.9E-22 150.4 6.5 67 76-149 4-70 (306)
42 smart00271 DnaJ DnaJ molecular 99.7 9.6E-17 2.1E-21 109.6 6.1 59 76-139 1-59 (60)
43 cd06257 DnaJ DnaJ domain or J- 99.6 2.9E-16 6.4E-21 105.3 6.3 55 77-137 1-55 (55)
44 KOG0721 Molecular chaperone (D 99.6 2.2E-16 4.7E-21 132.9 7.0 76 74-155 97-172 (230)
45 PHA03102 Small T antigen; Revi 99.6 3.6E-16 7.8E-21 126.6 6.8 70 76-155 5-76 (153)
46 TIGR03835 termin_org_DnaJ term 99.6 1.1E-15 2.4E-20 147.9 9.1 70 76-152 2-71 (871)
47 COG2214 CbpA DnaJ-class molecu 99.6 1.1E-15 2.3E-20 127.0 6.8 68 74-147 4-72 (237)
48 PRK05014 hscB co-chaperone Hsc 99.6 5E-15 1.1E-19 122.4 6.6 72 76-148 1-74 (171)
49 KOG0624 dsRNA-activated protei 99.6 3.2E-15 6.9E-20 134.1 5.3 76 72-150 390-465 (504)
50 PRK01356 hscB co-chaperone Hsc 99.5 1.3E-14 2.8E-19 119.4 5.9 71 76-149 2-74 (166)
51 PRK00294 hscB co-chaperone Hsc 99.5 3E-14 6.6E-19 117.9 7.2 74 74-148 2-77 (173)
52 PRK03578 hscB co-chaperone Hsc 99.5 3.1E-14 6.7E-19 118.2 6.6 72 75-147 5-78 (176)
53 KOG0720 Molecular chaperone (D 99.4 8.7E-14 1.9E-18 128.0 5.5 72 74-152 233-304 (490)
54 KOG0722 Molecular chaperone (D 99.4 8.9E-14 1.9E-18 119.8 4.6 74 72-152 29-102 (329)
55 KOG0550 Molecular chaperone (D 99.4 8.1E-14 1.8E-18 127.2 3.9 79 71-154 368-446 (486)
56 PRK09430 djlA Dna-J like membr 99.4 2.7E-13 5.8E-18 119.5 5.6 65 73-137 197-262 (267)
57 KOG0714 Molecular chaperone (D 99.4 4.8E-13 1E-17 116.1 5.0 70 75-149 2-71 (306)
58 PHA02624 large T antigen; Prov 99.4 9.4E-13 2E-17 126.2 7.3 83 74-166 9-96 (647)
59 PTZ00100 DnaJ chaperone protei 99.3 1.3E-12 2.9E-17 101.0 5.4 52 75-136 64-115 (116)
60 COG5407 SEC63 Preprotein trans 99.3 1.1E-12 2.4E-17 120.6 5.0 78 75-153 97-174 (610)
61 PRK01773 hscB co-chaperone Hsc 99.3 9.7E-12 2.1E-16 103.0 6.4 72 76-148 2-75 (173)
62 TIGR00714 hscB Fe-S protein as 99.1 1.5E-10 3.3E-15 94.5 6.3 61 88-149 3-63 (157)
63 KOG1150 Predicted molecular ch 99.0 5.4E-10 1.2E-14 93.5 6.2 67 72-143 49-115 (250)
64 COG5269 ZUO1 Ribosome-associat 99.0 3.9E-10 8.4E-15 98.3 5.1 71 74-148 41-114 (379)
65 KOG1789 Endocytosis protein RM 98.4 4.6E-07 1E-11 90.9 5.9 63 66-137 1271-1337(2235)
66 KOG0568 Molecular chaperone (D 98.3 3.5E-07 7.5E-12 78.5 3.4 76 56-138 27-103 (342)
67 KOG0723 Molecular chaperone (D 98.0 7.7E-06 1.7E-10 62.1 5.0 53 76-138 56-108 (112)
68 KOG3192 Mitochondrial J-type c 97.7 5E-05 1.1E-09 61.5 4.7 74 73-147 5-80 (168)
69 COG1076 DjlA DnaJ-domain-conta 97.3 0.00015 3.1E-09 60.1 2.1 62 74-135 111-173 (174)
70 KOG0431 Auxilin-like protein a 96.7 0.0014 3E-08 62.1 3.8 52 84-135 396-448 (453)
71 COG1076 DjlA DnaJ-domain-conta 96.4 0.0017 3.7E-08 53.7 2.1 72 77-149 2-75 (174)
72 PF03656 Pam16: Pam16; InterP 94.1 0.11 2.3E-06 41.1 4.9 54 76-139 58-111 (127)
73 PF14687 DUF4460: Domain of un 85.8 1.4 3E-05 34.0 4.3 52 86-139 4-55 (112)
74 PF13446 RPT: A repeated domai 84.7 1.4 3E-05 29.9 3.4 27 76-102 5-31 (62)
75 PF11833 DUF3353: Protein of u 83.0 2.1 4.5E-05 36.2 4.5 40 85-138 1-40 (194)
76 KOG0724 Zuotin and related mol 79.8 1.5 3.2E-05 39.7 2.7 59 88-148 4-62 (335)
77 COG5552 Uncharacterized conser 47.8 67 0.0014 23.1 5.2 36 76-111 3-38 (88)
78 PF07709 SRR: Seven Residue Re 44.5 15 0.00033 17.6 1.1 13 124-136 2-14 (14)
79 KOG3442 Uncharacterized conser 29.4 70 0.0015 25.2 3.3 34 77-110 60-93 (132)
80 PF12434 Malate_DH: Malate deh 28.5 66 0.0014 18.5 2.2 17 90-106 10-26 (28)
81 PF10041 DUF2277: Uncharacteri 27.7 2.1E+02 0.0046 20.6 5.2 36 76-111 3-38 (78)
82 cd00084 HMG-box High Mobility 23.5 2.1E+02 0.0045 18.3 4.6 42 94-146 12-53 (66)
83 cd01388 SOX-TCF_HMG-box SOX-TC 21.2 2.4E+02 0.0052 19.1 4.6 41 95-146 14-54 (72)
84 cd01780 PLC_epsilon_RA Ubiquit 20.8 1.1E+02 0.0023 22.9 2.7 35 75-109 10-44 (93)
85 COG2879 Uncharacterized small 20.4 1.9E+02 0.004 20.1 3.6 28 96-131 27-54 (65)
No 1
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Probab=99.94 E-value=2.7e-27 Score=214.32 Aligned_cols=97 Identities=38% Similarity=0.558 Sum_probs=82.3
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCCCcc
Q 027187 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPMK 154 (227)
Q Consensus 75 ~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~~ 154 (227)
.+|||+||||+++||.+|||+|||+||++||||+|+.+ ++|+++|++|++||+||+||++|+.||++|......
T Consensus 3 ~~dyYeiLGV~k~As~~EIKkAYRkLA~kyHPD~n~g~------~~AeeKFKEI~eAYEVLsD~eKRa~YD~fG~~~~~~ 76 (371)
T COG0484 3 KRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGD------KEAEEKFKEINEAYEVLSDPEKRAAYDQFGHAGFKA 76 (371)
T ss_pred ccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC------HHHHHHHHHHHHHHHHhCCHHHHHHhhccCcccccc
Confidence 58999999999999999999999999999999999863 789999999999999999999999999999987753
Q ss_pred hhHHHHHHHHHhhhccc-hhhHHHHHHHH
Q 027187 155 ASQAWMEWLIKKRKAFD-QRGDMAIAAWA 182 (227)
Q Consensus 155 ~~~~~~~~~~~~r~~f~-~~g~~~~~~~~ 182 (227)
++.+ .+ .-.+|+ +++|+|..+|+
T Consensus 77 gg~g--g~---g~~~fgg~~~DIF~~~Fg 100 (371)
T COG0484 77 GGFG--GF---GFGGFGGDFGDIFEDFFG 100 (371)
T ss_pred CCcC--CC---CcCCCCCCHHHHHHHhhc
Confidence 2211 11 112344 48999999996
No 2
>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.89 E-value=5.2e-24 Score=189.05 Aligned_cols=73 Identities=40% Similarity=0.625 Sum_probs=68.3
Q ss_pred CCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCC
Q 027187 73 ADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVN 151 (227)
Q Consensus 73 ~~~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~ 151 (227)
...+|||+||||+++|+..|||+|||+||++||||||+++ +.|.+.|+.|+.||+||+||++|+.||++|...
T Consensus 13 ~~~rDfYelLgV~k~Asd~eIKkAYRKLALk~HPDkNpdd------p~A~e~F~~in~AYEVLsDpekRk~YD~~GEeg 85 (336)
T KOG0713|consen 13 LAGRDFYELLGVPKNASDQEIKKAYRKLALKYHPDKNPDD------PNANEKFKEINAAYEVLSDPEKRKHYDTYGEEG 85 (336)
T ss_pred hcCCCHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC------HHHHHHHHHHHHHHHHhcCHHHHHHHHhhhHhh
Confidence 3469999999999999999999999999999999999985 889999999999999999999999999998543
No 3
>PRK14288 chaperone protein DnaJ; Provisional
Probab=99.86 E-value=2.1e-22 Score=184.36 Aligned_cols=70 Identities=44% Similarity=0.666 Sum_probs=65.0
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCC
Q 027187 76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVN 151 (227)
Q Consensus 76 ~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~ 151 (227)
.|||+||||+++||.+|||+|||+||++||||+++.+ +.|+++|++|++||+||+||++|+.||++|...
T Consensus 3 ~dyY~vLgv~~~As~~eIkkayrkla~k~HPD~~~~~------~~a~~~f~~i~~AYevLsd~~kR~~YD~~G~~~ 72 (369)
T PRK14288 3 LSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGD------KEAEEKFKLINEAYGVLSDEKKRALYDRYGKKG 72 (369)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCc------cHHHHHHHHHHHHHHHhccHHHHHHHHHhcccc
Confidence 7999999999999999999999999999999998753 568999999999999999999999999988643
No 4
>PRK14296 chaperone protein DnaJ; Provisional
Probab=99.86 E-value=4.1e-22 Score=182.68 Aligned_cols=69 Identities=39% Similarity=0.701 Sum_probs=64.2
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCC
Q 027187 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV 150 (227)
Q Consensus 75 ~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 150 (227)
.+|||+||||+++|+.+|||+|||+||++||||++++ +.|+++|++|++||+||+||++|+.||++|..
T Consensus 3 ~~dyY~~Lgv~~~a~~~eik~ayrkla~~~HPD~n~~-------~~a~~~F~~i~~AyevLsD~~KR~~YD~~G~~ 71 (372)
T PRK14296 3 KKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKS-------PDAHDKMVEINEAADVLLDKDKRKQYDQFGHA 71 (372)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-------chHHHHHHHHHHHHHHhcCHHHhhhhhhccch
Confidence 4799999999999999999999999999999999864 45889999999999999999999999998864
No 5
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.84 E-value=1.5e-21 Score=174.93 Aligned_cols=69 Identities=43% Similarity=0.619 Sum_probs=64.7
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCCC
Q 027187 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNP 152 (227)
Q Consensus 75 ~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~ 152 (227)
...||+||||+++|+.+|||+|||+|+++||||||++ +.++|++|++||+||+||++|+.||++|....
T Consensus 3 ~~~~y~il~v~~~As~~eikkayrkla~k~HpDkn~~---------~~ekfkei~~AyevLsd~ekr~~yD~~g~~~~ 71 (337)
T KOG0712|consen 3 NTKLYDILGVSPDASEEEIKKAYRKLALKYHPDKNPD---------AGEKFKEISQAYEVLSDPEKREIYDQYGEEGL 71 (337)
T ss_pred ccccceeeccCCCcCHHHHHHHHHHHHHHhCCCCCcc---------HHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhh
Confidence 5789999999999999999999999999999999976 67999999999999999999999999996554
No 6
>PRK14286 chaperone protein DnaJ; Provisional
Probab=99.83 E-value=2.7e-21 Score=177.34 Aligned_cols=99 Identities=33% Similarity=0.544 Sum_probs=77.1
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCCCcc
Q 027187 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPMK 154 (227)
Q Consensus 75 ~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~~ 154 (227)
..|||+||||+++|+.+|||+|||+||++||||+++.+ ++++++|++|++||+||+||.+|+.||+++..+...
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~------~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~ 76 (372)
T PRK14286 3 ERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGN------KESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVNA 76 (372)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc------hHHHHHHHHHHHHHHHhccHHHHHHHHHhCchhhcc
Confidence 47999999999999999999999999999999998653 568899999999999999999999999988643211
Q ss_pred h--h---HHHHHHHHHhhhccchhhHHHHHHHHH
Q 027187 155 A--S---QAWMEWLIKKRKAFDQRGDMAIAAWAE 183 (227)
Q Consensus 155 ~--~---~~~~~~~~~~r~~f~~~g~~~~~~~~~ 183 (227)
. + ..+.. +...|+.++++|..+|++
T Consensus 77 ~~~~~~~~~~~~----~~~~~~~~~d~f~~ffgg 106 (372)
T PRK14286 77 GAGGFGQGAYTD----FSDIFGDFGDIFGDFFGG 106 (372)
T ss_pred ccCCCCCCCccc----ccccccchhhHHHHhhCC
Confidence 1 0 00100 011234567888888863
No 7
>PRK14287 chaperone protein DnaJ; Provisional
Probab=99.83 E-value=7.9e-21 Score=174.18 Aligned_cols=96 Identities=30% Similarity=0.520 Sum_probs=76.0
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCCCcc
Q 027187 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPMK 154 (227)
Q Consensus 75 ~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~~ 154 (227)
..|||+||||+++|+.+|||+|||+||++||||+++. +.++++|++|++||+||+||++|+.||++|..+...
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~-------~~~~~~f~~i~~Ay~~L~d~~kR~~YD~~G~~~~~~ 75 (371)
T PRK14287 3 KRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKA-------PDAEDKFKEVKEAYDTLSDPQKKAHYDQFGHTDPNQ 75 (371)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-------hhHHHHHHHHHHHHHHhCcHhHHHHHHhhCCccccc
Confidence 4799999999999999999999999999999999853 457899999999999999999999999998654321
Q ss_pred hhHHHHHHHHHhhhccchhhHHHHHHHHH
Q 027187 155 ASQAWMEWLIKKRKAFDQRGDMAIAAWAE 183 (227)
Q Consensus 155 ~~~~~~~~~~~~r~~f~~~g~~~~~~~~~ 183 (227)
.... ....+|.+++++|..+|++
T Consensus 76 ~~~~------~~~~~f~~~~d~f~~~fgg 98 (371)
T PRK14287 76 GFGG------GGAGDFGGFSDIFDMFFGG 98 (371)
T ss_pred ccCC------CCCccccchHHHHHhhhcc
Confidence 1000 0001244467888888874
No 8
>PRK14285 chaperone protein DnaJ; Provisional
Probab=99.82 E-value=1e-20 Score=173.14 Aligned_cols=101 Identities=32% Similarity=0.502 Sum_probs=76.4
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCCCcch
Q 027187 76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPMKA 155 (227)
Q Consensus 76 ~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~~~ 155 (227)
.|||+||||+++|+.+|||+|||+|+++||||+++.+ +.++++|++|++||+||+||.+|+.||+++..+....
T Consensus 3 ~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~------~~a~~~f~~i~~Ay~vL~d~~kr~~yd~~g~~~~~~~ 76 (365)
T PRK14285 3 RDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGN------KEAESIFKEATEAYEVLIDDNKRAQYDRFGHTAFEGG 76 (365)
T ss_pred CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC------HHHHHHHHHHHHHHHHHcCcchhHHHHhcCcchhccC
Confidence 6999999999999999999999999999999998653 5688999999999999999999999999886432111
Q ss_pred hH--HHH-HHHHHhhhccchhhHHHHHHHHH
Q 027187 156 SQ--AWM-EWLIKKRKAFDQRGDMAIAAWAE 183 (227)
Q Consensus 156 ~~--~~~-~~~~~~r~~f~~~g~~~~~~~~~ 183 (227)
.. +.. .+ ..+...|+.++++|..+|++
T Consensus 77 ~~~~~~~~g~-~~~~~~~~~~~d~f~~~fgg 106 (365)
T PRK14285 77 GGFEGFSGGF-SGFSDIFEDFGDIFDSFFTG 106 (365)
T ss_pred CCccccCCCc-cccccccccHHHHHHHhhcC
Confidence 00 000 00 00001134467888888874
No 9
>PRK14298 chaperone protein DnaJ; Provisional
Probab=99.81 E-value=2.3e-20 Score=171.39 Aligned_cols=99 Identities=36% Similarity=0.454 Sum_probs=76.6
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCCCcc
Q 027187 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPMK 154 (227)
Q Consensus 75 ~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~~ 154 (227)
.+|||+||||+++|+.+|||+|||+||++||||+++. +.++++|++|++||+||+||.+|+.||++|..+...
T Consensus 4 ~~d~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~-------~~~~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~ 76 (377)
T PRK14298 4 TRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKE-------PDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGIDN 76 (377)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHhCccccCC-------hhHHHHHHHHHHHHHHhcchHhhhhhhhcCcccccc
Confidence 4799999999999999999999999999999999864 457899999999999999999999999988643221
Q ss_pred hhHHHHHHHHHhhhccchhhHHHHHHHHH
Q 027187 155 ASQAWMEWLIKKRKAFDQRGDMAIAAWAE 183 (227)
Q Consensus 155 ~~~~~~~~~~~~r~~f~~~g~~~~~~~~~ 183 (227)
....-..+ . ..+|++++++|..+|++
T Consensus 77 ~~~~~~~~-~--~~~~~~~~d~f~~~Fgg 102 (377)
T PRK14298 77 QYSAEDIF-R--GADFGGFGDIFEMFFGG 102 (377)
T ss_pred ccCccccc-c--cCCcCcchhhhHhhhcC
Confidence 10000000 0 01345577888888874
No 10
>PRK14278 chaperone protein DnaJ; Provisional
Probab=99.81 E-value=2.2e-20 Score=171.62 Aligned_cols=96 Identities=34% Similarity=0.472 Sum_probs=75.4
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCCCcch
Q 027187 76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPMKA 155 (227)
Q Consensus 76 ~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~~~ 155 (227)
+|||+||||+++|+.+|||+|||+||++||||++++ +.++++|++|++||+||+||.+|+.||++|.......
T Consensus 3 ~d~y~iLgv~~~a~~~eik~ayr~la~~~hpD~~~~-------~~a~~~f~~i~~Ay~vL~d~~~r~~YD~~G~~~~~~~ 75 (378)
T PRK14278 3 RDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPD-------EEAQEKFKEISVAYEVLSDPEKRRIVDLGGDPLESAG 75 (378)
T ss_pred CCcceecCCCCCCCHHHHHHHHHHHHHHHCCCCCCc-------HHHHHHHHHHHHHHHHhchhhhhhhhhccCCcccccc
Confidence 699999999999999999999999999999999864 4688999999999999999999999999886321100
Q ss_pred hHHHHHHHHHhhhccchhhHHHHHHHHH
Q 027187 156 SQAWMEWLIKKRKAFDQRGDMAIAAWAE 183 (227)
Q Consensus 156 ~~~~~~~~~~~r~~f~~~g~~~~~~~~~ 183 (227)
+.. .. +..+|++++++|..||++
T Consensus 76 ~~~-~g----~~~~f~~~~d~f~~ffgg 98 (378)
T PRK14278 76 GGG-GG----FGGGFGGLGDVFEAFFGG 98 (378)
T ss_pred CCC-CC----CCcCcCchhHHHHHHhCC
Confidence 000 00 001245567888888874
No 11
>PRK14276 chaperone protein DnaJ; Provisional
Probab=99.81 E-value=1.8e-20 Score=172.34 Aligned_cols=100 Identities=29% Similarity=0.471 Sum_probs=76.8
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCCCcc
Q 027187 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPMK 154 (227)
Q Consensus 75 ~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~~ 154 (227)
..|||+||||+++|+.+|||+|||+|+++||||++++ +.++++|++|++||+||+||.+|+.||++|......
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~-------~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~~~~~ 75 (380)
T PRK14276 3 NTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKE-------PGAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGANG 75 (380)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-------cCHHHHHHHHHHHHHHhcCHhhhhhHhhcCCccccC
Confidence 4799999999999999999999999999999999864 357899999999999999999999999988643221
Q ss_pred h--h--HHHHHHHHHhhhccchhhHHHHHHHHH
Q 027187 155 A--S--QAWMEWLIKKRKAFDQRGDMAIAAWAE 183 (227)
Q Consensus 155 ~--~--~~~~~~~~~~r~~f~~~g~~~~~~~~~ 183 (227)
. + .....+. ...+|+.++++|..+|++
T Consensus 76 ~~~~~~~~~~~~~--~~~~~~~~~d~f~~~fgg 106 (380)
T PRK14276 76 GFGGGAGGFGGFD--GSGGFGGFEDIFSSFFGG 106 (380)
T ss_pred CCCCCCCCCCCcc--ccccccchhhHHHHHhCc
Confidence 0 0 0000000 001344567888888864
No 12
>PRK14294 chaperone protein DnaJ; Provisional
Probab=99.81 E-value=2.2e-20 Score=170.96 Aligned_cols=98 Identities=34% Similarity=0.494 Sum_probs=76.7
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCCCcc
Q 027187 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPMK 154 (227)
Q Consensus 75 ~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~~ 154 (227)
.+|||+||||+++|+.+|||+|||+||++||||+++.+ +.++++|++|++||+||+||.+|+.||++|..+...
T Consensus 3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~------~~~~~~f~~~~~Ay~vL~d~~~r~~yD~~G~~g~~~ 76 (366)
T PRK14294 3 KRDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGD------KEAEELFKEAAEAYEVLSDPKKRGIYDQYGHEGLSG 76 (366)
T ss_pred CCChHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCc------hHHHHHHHHHHHHHHHhccHHHHHHHHhhccccccC
Confidence 47999999999999999999999999999999998753 468899999999999999999999999998653321
Q ss_pred hh-HHHHHHHHHhhhccchhhHHHHHHHH
Q 027187 155 AS-QAWMEWLIKKRKAFDQRGDMAIAAWA 182 (227)
Q Consensus 155 ~~-~~~~~~~~~~r~~f~~~g~~~~~~~~ 182 (227)
.. .+.. .+...|+.++++|..+|+
T Consensus 77 ~~~~~~~----~~~~~~~~~~d~f~~~fg 101 (366)
T PRK14294 77 TGFSGFS----GFDDIFSSFGDIFEDFFG 101 (366)
T ss_pred CCCCCcC----ccccchhhhhhhHHHhhc
Confidence 10 0000 011124456778888886
No 13
>PRK14301 chaperone protein DnaJ; Provisional
Probab=99.81 E-value=3.3e-20 Score=170.21 Aligned_cols=98 Identities=34% Similarity=0.499 Sum_probs=76.6
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCCCcc
Q 027187 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPMK 154 (227)
Q Consensus 75 ~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~~ 154 (227)
..|||+||||+++|+.++||+|||+||++||||+++.+ ++++++|++|++||+||+||.+|+.||+++..+...
T Consensus 3 ~~~~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~------~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~g~~g~~~ 76 (373)
T PRK14301 3 QRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDN------PEAEQKFKEAAEAYEVLRDAEKRARYDRFGHAGVNG 76 (373)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHhCCCcCCCC------hHHHHHHHHHHHHHHHhcchhhhhhhhhcccccccc
Confidence 37999999999999999999999999999999998753 568899999999999999999999999988643211
Q ss_pred hh--HHHHHHHHHhhhccchhhHHHHHHHH
Q 027187 155 AS--QAWMEWLIKKRKAFDQRGDMAIAAWA 182 (227)
Q Consensus 155 ~~--~~~~~~~~~~r~~f~~~g~~~~~~~~ 182 (227)
.+ .+|. .....|+.|+++|..+|+
T Consensus 77 ~~~~~g~~----~~~~~~~~f~d~f~~~fg 102 (373)
T PRK14301 77 NGGFGGFS----SAEDIFSHFSDIFGDLFG 102 (373)
T ss_pred CCCCCCcc----cccccccchHHHHHHHhh
Confidence 10 1111 011234556777777775
No 14
>PTZ00037 DnaJ_C chaperone protein; Provisional
Probab=99.81 E-value=3.1e-20 Score=172.50 Aligned_cols=67 Identities=42% Similarity=0.609 Sum_probs=61.9
Q ss_pred CCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCC
Q 027187 74 DEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV 150 (227)
Q Consensus 74 ~~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 150 (227)
...|||+||||+++||.+|||+|||+||++||||++++ .++|++|++||+||+||++|+.||.++..
T Consensus 26 ~~~d~Y~vLGV~~~As~~eIKkAYrkla~k~HPDk~~~----------~e~F~~i~~AYevLsD~~kR~~YD~~G~~ 92 (421)
T PTZ00037 26 DNEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGD----------PEKFKEISRAYEVLSDPEKRKIYDEYGEE 92 (421)
T ss_pred cchhHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCch----------HHHHHHHHHHHHHhccHHHHHHHhhhcch
Confidence 35899999999999999999999999999999999742 47999999999999999999999998764
No 15
>PRK14279 chaperone protein DnaJ; Provisional
Probab=99.81 E-value=3.1e-20 Score=171.35 Aligned_cols=69 Identities=41% Similarity=0.658 Sum_probs=64.3
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCC
Q 027187 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNR 149 (227)
Q Consensus 75 ~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~ 149 (227)
.+|||+||||+++|+.+|||+|||+||++||||+++++ +.|+++|++|++||+||+||++|+.||+++.
T Consensus 8 ~~Dyy~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~------~~a~~~f~~i~~Ay~vLsD~~KR~~YD~~G~ 76 (392)
T PRK14279 8 EKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGD------PAAEERFKAVSEAHDVLSDPAKRKEYDETRR 76 (392)
T ss_pred ccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC------hHHHHHHHHHHHHHHHhcchhhhhHHHHhhh
Confidence 47999999999999999999999999999999998653 5689999999999999999999999999864
No 16
>PRK14291 chaperone protein DnaJ; Provisional
Probab=99.80 E-value=5.5e-20 Score=169.18 Aligned_cols=70 Identities=46% Similarity=0.715 Sum_probs=64.6
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCC
Q 027187 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVN 151 (227)
Q Consensus 75 ~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~ 151 (227)
.+|||+||||+++|+.++||+|||+|+++||||++++ +.++++|++|++||+||+||.+|+.||+++...
T Consensus 2 ~~d~Y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~-------~~~~~~f~~i~~Ay~vLsd~~kR~~YD~~g~~~ 71 (382)
T PRK14291 2 KKDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKN-------PEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAA 71 (382)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCCCCCCC-------ccHHHHHHHHHHHHHHhcCHHHHHHHhhhcccc
Confidence 3799999999999999999999999999999999864 457899999999999999999999999988643
No 17
>PRK14282 chaperone protein DnaJ; Provisional
Probab=99.79 E-value=1.5e-19 Score=165.71 Aligned_cols=72 Identities=44% Similarity=0.636 Sum_probs=65.4
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCC
Q 027187 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVN 151 (227)
Q Consensus 75 ~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~ 151 (227)
..|||+||||+++|+.+|||+|||+|+++||||+++.. ...|+++|++|++||+||+||.+|+.||+++...
T Consensus 3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~-----~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~g~~~ 74 (369)
T PRK14282 3 KKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPEN-----RKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVG 74 (369)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCccc-----hhHHHHHHHHHHHHHHHhcChhhHHHHhhcCccc
Confidence 47999999999999999999999999999999998652 2458899999999999999999999999987643
No 18
>PRK10767 chaperone protein DnaJ; Provisional
Probab=99.79 E-value=1.3e-19 Score=166.07 Aligned_cols=71 Identities=44% Similarity=0.707 Sum_probs=65.1
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCC
Q 027187 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVN 151 (227)
Q Consensus 75 ~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~ 151 (227)
..|||+||||+++|+.+|||+|||+||++||||+++.+ +.++++|++|++||+||+||.+|+.||.++...
T Consensus 3 ~~d~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~------~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~ 73 (371)
T PRK10767 3 KRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGD------KEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAA 73 (371)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCc------HHHHHHHHHHHHHHHHhcchhhhhHhhhccccc
Confidence 47999999999999999999999999999999998653 458899999999999999999999999987643
No 19
>PRK14283 chaperone protein DnaJ; Provisional
Probab=99.78 E-value=3.2e-19 Score=163.93 Aligned_cols=69 Identities=46% Similarity=0.785 Sum_probs=64.3
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCC
Q 027187 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV 150 (227)
Q Consensus 75 ~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 150 (227)
..|||+||||+++|+.+|||+|||+||++||||++++ +.++++|++|++||+||+||.+|+.||++|..
T Consensus 4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~-------~~a~~~f~~i~~Ay~~Lsd~~kR~~YD~~G~~ 72 (378)
T PRK14283 4 KRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEE-------EGAEEKFKEISEAYAVLSDDEKRQRYDQFGHA 72 (378)
T ss_pred cCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-------ccHHHHHHHHHHHHHHhchhHHHHHHhhhccc
Confidence 5799999999999999999999999999999999864 45889999999999999999999999998754
No 20
>PRK14277 chaperone protein DnaJ; Provisional
Probab=99.78 E-value=3.5e-19 Score=164.07 Aligned_cols=70 Identities=51% Similarity=0.787 Sum_probs=64.9
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCC
Q 027187 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV 150 (227)
Q Consensus 75 ~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 150 (227)
..|||+||||+++|+.+|||+|||+||++||||+++.. +.++++|++|++||+||+||.+|+.||++|..
T Consensus 4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~------~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~ 73 (386)
T PRK14277 4 KKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGD------KEAEQKFKEINEAYEILSDPQKRAQYDQFGHA 73 (386)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCc------hHHHHHHHHHHHHHHHhCCHHHHHHHHhhccc
Confidence 47999999999999999999999999999999998753 56889999999999999999999999998764
No 21
>PRK14297 chaperone protein DnaJ; Provisional
Probab=99.77 E-value=4.1e-19 Score=163.31 Aligned_cols=71 Identities=42% Similarity=0.693 Sum_probs=65.5
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCC
Q 027187 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVN 151 (227)
Q Consensus 75 ~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~ 151 (227)
..|||+||||+++|+.+|||+|||+||++||||+++.+ +.++++|++|++||+||+||.+|+.||++|..+
T Consensus 3 ~~d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~------~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~G~~~ 73 (380)
T PRK14297 3 SKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGN------KEAEEKFKEINEAYQVLSDPQKKAQYDQFGTAD 73 (380)
T ss_pred CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc------HHHHHHHHHHHHHHHHhcCHhhhCchhhcCccc
Confidence 37999999999999999999999999999999998753 568899999999999999999999999988654
No 22
>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.77 E-value=5.6e-19 Score=156.53 Aligned_cols=75 Identities=37% Similarity=0.581 Sum_probs=69.9
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCCCcc
Q 027187 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPMK 154 (227)
Q Consensus 75 ~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~~ 154 (227)
..|||+||||+.+++..+|++|||.++++||||||+++ +.|.++|+.|.+||+||+|+..|..||..+......
T Consensus 4 ~~dyY~lLgi~~~at~~eIkKaYr~kaL~~HPDKNp~d------P~A~ekFq~L~eAy~VL~D~~~R~~YDk~~k~~~~~ 77 (296)
T KOG0691|consen 4 DTDYYDLLGISEDATDAEIKKAYRKKALQYHPDKNPGD------PQAAEKFQELSEAYEVLSDEESRAAYDKLRKSGSSA 77 (296)
T ss_pred cchHHHHhCCCCCCCHHHHHHHHHHHHHhcCCCCCCCC------hHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhhcccc
Confidence 57999999999999999999999999999999999985 679999999999999999999999999998766654
Q ss_pred h
Q 027187 155 A 155 (227)
Q Consensus 155 ~ 155 (227)
.
T Consensus 78 ~ 78 (296)
T KOG0691|consen 78 Q 78 (296)
T ss_pred h
Confidence 4
No 23
>PRK14299 chaperone protein DnaJ; Provisional
Probab=99.77 E-value=4.8e-19 Score=157.56 Aligned_cols=69 Identities=41% Similarity=0.660 Sum_probs=64.1
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCC
Q 027187 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV 150 (227)
Q Consensus 75 ~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 150 (227)
..|||+||||+++||.+|||+|||+|+++||||++++ +.++++|++|++||+||+||.+|+.||+++..
T Consensus 3 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~-------~~~~~~f~~i~~Ay~~L~d~~kr~~yD~~g~~ 71 (291)
T PRK14299 3 YKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKS-------PGAEEKFKEINEAYTVLSDPEKRRIYDTYGTT 71 (291)
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-------hhHHHHHHHHHHHHHHhcCHHHHHHHHhcCCc
Confidence 3799999999999999999999999999999999864 45789999999999999999999999998864
No 24
>PRK14290 chaperone protein DnaJ; Provisional
Probab=99.77 E-value=5e-19 Score=161.97 Aligned_cols=71 Identities=46% Similarity=0.748 Sum_probs=65.1
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCC
Q 027187 76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVN 151 (227)
Q Consensus 76 ~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~ 151 (227)
.|||+||||+++|+.+|||+|||+|+++||||+++.. ...|+++|++|++||+||+||.+|+.||.+|..+
T Consensus 3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~-----~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~G~~~ 73 (365)
T PRK14290 3 KDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGN-----KAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTVD 73 (365)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-----hhHHHHHHHHHHHHHHHhcChhhhhhhcccCCcc
Confidence 6999999999999999999999999999999998653 2368899999999999999999999999988653
No 25
>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.77 E-value=3.7e-19 Score=153.93 Aligned_cols=69 Identities=38% Similarity=0.590 Sum_probs=65.4
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCC
Q 027187 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNR 149 (227)
Q Consensus 75 ~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~ 149 (227)
..++|+||||+++|+.++||++||+|+++||||+++++ +++..+|++||+||+||+||.+|..||++|.
T Consensus 30 ~~~LYdVLgl~k~at~d~IKKaYR~L~~k~HPD~~gd~------P~~~dkf~eIN~Ay~ILsD~~kR~~YD~~g~ 98 (279)
T KOG0716|consen 30 RLDLYDVLGLPKTATKDEIKKAYRKLALKYHPDKNGDN------PEATDKFKEINTAYAILSDPTKRNVYDEYGE 98 (279)
T ss_pred hhHHHHHhCCCcccchHHHHHHHHHHHHHhCCCcCCCC------chhHHHHHHHHHHHHHhcChhhhhhHHHhhh
Confidence 57999999999999999999999999999999999874 7789999999999999999999999999864
No 26
>TIGR02349 DnaJ_bact chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Probab=99.77 E-value=3.8e-19 Score=162.02 Aligned_cols=97 Identities=38% Similarity=0.532 Sum_probs=74.7
Q ss_pred CccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCCCcchh
Q 027187 77 SPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPMKAS 156 (227)
Q Consensus 77 d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~~~~ 156 (227)
|||+||||+++|+.++||+|||+|+++||||+++. +.++++|++|++||+||+||.+|+.||.++........
T Consensus 1 d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~-------~~~~~~f~~i~~Ay~vL~d~~~R~~yd~~g~~~~~~~~ 73 (354)
T TIGR02349 1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKD-------KEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGG 73 (354)
T ss_pred ChHHhCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC-------ccHHHHHHHHHHHHHHhhChHHHHhhhhcccccccccC
Confidence 79999999999999999999999999999999863 45789999999999999999999999998765432110
Q ss_pred ----HHHHHHHHHhhhccchhhHHHHHHHHH
Q 027187 157 ----QAWMEWLIKKRKAFDQRGDMAIAAWAE 183 (227)
Q Consensus 157 ----~~~~~~~~~~r~~f~~~g~~~~~~~~~ 183 (227)
..+..+ ....|+.+.++|..+|++
T Consensus 74 ~~~~~~~~~~---~~~~~~~~~~~f~~~fg~ 101 (354)
T TIGR02349 74 GGGGGGFNGF---DIGFFGDFGDIFGDFFGG 101 (354)
T ss_pred cCCCCCcCCc---cccCcCchhhhHHHHhcc
Confidence 000000 001244567888888874
No 27
>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []. Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....
Probab=99.77 E-value=4.1e-19 Score=123.24 Aligned_cols=64 Identities=58% Similarity=0.926 Sum_probs=59.7
Q ss_pred CccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhc
Q 027187 77 SPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYD 145 (227)
Q Consensus 77 d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD 145 (227)
|||+||||+++++.++||++|+++++++|||++.... ..+++.|..|++||++|+||.+|+.||
T Consensus 1 ~~y~iLgl~~~~~~~eik~~y~~l~~~~HPD~~~~~~-----~~~~~~~~~i~~Ay~~L~~~~~R~~YD 64 (64)
T PF00226_consen 1 NPYEILGLPPDASDEEIKKAYRRLSKQYHPDKNSGDE-----AEAEEKFARINEAYEILSDPERRRRYD 64 (64)
T ss_dssp HHHHHCTSTTTSSHHHHHHHHHHHHHHTSTTTGTSTH-----HHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred ChHHHCCCCCCCCHHHHHHHHHhhhhccccccchhhh-----hhhhHHHHHHHHHHHHhCCHHHHHhcC
Confidence 5899999999999999999999999999999987741 468899999999999999999999998
No 28
>PRK14280 chaperone protein DnaJ; Provisional
Probab=99.77 E-value=6.2e-19 Score=161.92 Aligned_cols=70 Identities=41% Similarity=0.720 Sum_probs=64.6
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCC
Q 027187 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVN 151 (227)
Q Consensus 75 ~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~ 151 (227)
..|||+||||+++|+.+|||+|||+|+++||||+++. +.++++|++|++||+||+||.+|+.||++|...
T Consensus 3 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HpD~~~~-------~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~ 72 (376)
T PRK14280 3 KRDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKE-------EGADEKFKEISEAYEVLSDDQKRAQYDQFGHAG 72 (376)
T ss_pred CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-------ccHHHHHHHHHHHHHHhccHhHHHHHHhcCccc
Confidence 3799999999999999999999999999999999864 358899999999999999999999999988654
No 29
>PRK14295 chaperone protein DnaJ; Provisional
Probab=99.76 E-value=6.1e-19 Score=162.62 Aligned_cols=70 Identities=44% Similarity=0.731 Sum_probs=64.1
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcc----cCCC
Q 027187 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDM----DNRV 150 (227)
Q Consensus 75 ~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~----~~~~ 150 (227)
..|||+||||+++|+.+|||+|||+|+++||||+++.+ +.++++|++|++||+||+||.+|+.||+ ++..
T Consensus 8 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~------~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~~~~~G~~ 81 (389)
T PRK14295 8 EKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGD------AKAEERFKEISEAYDVLSDEKKRKEYDEARSLFGNG 81 (389)
T ss_pred ccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCc------hhHHHHHHHHHHHHHHHCchhhHHHHHHHHhhhccc
Confidence 37999999999999999999999999999999998653 5688999999999999999999999998 6643
No 30
>PRK14284 chaperone protein DnaJ; Provisional
Probab=99.76 E-value=6.6e-19 Score=162.51 Aligned_cols=69 Identities=39% Similarity=0.627 Sum_probs=64.3
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCC
Q 027187 76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV 150 (227)
Q Consensus 76 ~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 150 (227)
.|||+||||+++|+.+|||+|||+||++||||+++++ +.++++|++|++||+||+||++|+.||+++..
T Consensus 1 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~------~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~ 69 (391)
T PRK14284 1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGD------AEAEKRFKEVSEAYEVLSDAQKRESYDRYGKD 69 (391)
T ss_pred CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc------hHHHHHHHHHHHHHHHhcCHHHHHHHHhcccc
Confidence 4899999999999999999999999999999999753 56889999999999999999999999998864
No 31
>PRK14281 chaperone protein DnaJ; Provisional
Probab=99.75 E-value=1.1e-18 Score=161.34 Aligned_cols=69 Identities=41% Similarity=0.706 Sum_probs=64.3
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCC
Q 027187 76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV 150 (227)
Q Consensus 76 ~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 150 (227)
.|||+||||+++|+.+|||+|||+|+++||||+++.+ +.++++|++|++||+||+||.+|+.||+++..
T Consensus 3 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~------~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~g~~ 71 (397)
T PRK14281 3 RDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDN------KEAEEHFKEVNEAYEVLSNDDKRRRYDQFGHA 71 (397)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCc------hHHHHHHHHHHHHHHHhhhhhhhhhhhhccch
Confidence 6999999999999999999999999999999998653 46889999999999999999999999998764
No 32
>PRK14293 chaperone protein DnaJ; Provisional
Probab=99.75 E-value=1.6e-18 Score=159.18 Aligned_cols=68 Identities=47% Similarity=0.727 Sum_probs=63.4
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCC
Q 027187 76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV 150 (227)
Q Consensus 76 ~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 150 (227)
.|||+||||+++|+.+|||+|||+|+++||||+++. +.++++|++|++||+||+||.+|+.||.++..
T Consensus 3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~-------~~a~~~f~~i~~Ay~vL~~~~~R~~yd~~g~~ 70 (374)
T PRK14293 3 ADYYEILGVSRDADKDELKRAYRRLARKYHPDVNKE-------PGAEDRFKEINRAYEVLSDPETRARYDQFGEA 70 (374)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCC-------cCHHHHHHHHHHHHHHHhchHHHHHHhhcccc
Confidence 699999999999999999999999999999999864 34789999999999999999999999998764
No 33
>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.75 E-value=1.2e-18 Score=159.70 Aligned_cols=70 Identities=47% Similarity=0.684 Sum_probs=65.4
Q ss_pred CCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhccc
Q 027187 73 ADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMD 147 (227)
Q Consensus 73 ~~~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~ 147 (227)
...+.||+||||.++|+..+||++||+||++||||+++.. .++++++|+.|+.||+|||||..|++||..
T Consensus 5 ~~~~c~YE~L~v~~~a~d~eik~~YRklALq~HPDknpd~-----ieeat~~F~~i~aAYeVLSdp~eR~wyd~h 74 (508)
T KOG0717|consen 5 FKKRCYYEVLGVERDADDDEIKKNYRKLALQYHPDKNPDR-----IEEATQQFQLIQAAYEVLSDPQERAWYDSH 74 (508)
T ss_pred hhhhHHHHHhcccccCCHHHHHHHHHHHHHhhCCCCCCcc-----HHHHHHHHHHHHHHHHHhcChHhhhhHHHH
Confidence 3468999999999999999999999999999999998774 588999999999999999999999999985
No 34
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.74 E-value=1.7e-18 Score=153.70 Aligned_cols=70 Identities=43% Similarity=0.690 Sum_probs=65.4
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCC
Q 027187 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVN 151 (227)
Q Consensus 75 ~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~ 151 (227)
..|||+||||+++|+..|||+||++|+++||||.+.. +.+.++|++|.+||+||+|+++|..||..+...
T Consensus 42 ~~d~Y~vLgv~~~At~~EIK~Af~~LaKkyHPD~n~~-------~~a~~kF~eI~~AYEiLsd~eKR~~YD~~~~~~ 111 (288)
T KOG0715|consen 42 KEDYYKVLGVSRNATLSEIKSAFRKLAKKYHPDVNKD-------KEASKKFKEISEAYEILSDEEKRQEYDVYGLEQ 111 (288)
T ss_pred CcchhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCC-------cchhhHHHHHHHHHHHhcCHHHHHHHHHhhhhc
Confidence 3499999999999999999999999999999999976 468999999999999999999999999998754
No 35
>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.74 E-value=3.2e-18 Score=145.30 Aligned_cols=87 Identities=37% Similarity=0.636 Sum_probs=74.7
Q ss_pred CCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCCCc
Q 027187 74 DEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPM 153 (227)
Q Consensus 74 ~~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~ 153 (227)
...|+|+||||.++|+..+|++||++|++++|||+++. +...+++++|++|+.||.||+|.++|+.||+.|..+..
T Consensus 12 ~~~d~YevLGVer~a~~~eIrkAY~klal~~HPDk~~e----ed~~ea~~kFq~l~k~y~iLsDeekR~~YDetG~idd~ 87 (264)
T KOG0719|consen 12 NKKDLYEVLGVERDATDKEIRKAYHKLALRLHPDKNHE----EDKVEATEKFQQLQKAYQILSDEEKRAVYDETGSIDDE 87 (264)
T ss_pred cccCHHHHhhhcccCCHHHHHHHHHHHHHHhCCCcchh----hhHHHHHHHHHHHHHHHHHhhHHHHHHHHhccCCCCCc
Confidence 34699999999999999999999999999999999863 24578999999999999999999999999999987743
Q ss_pred ch--hHHHHHHHH
Q 027187 154 KA--SQAWMEWLI 164 (227)
Q Consensus 154 ~~--~~~~~~~~~ 164 (227)
.+ ...|.+|+.
T Consensus 88 ~~d~~~~~~e~~~ 100 (264)
T KOG0719|consen 88 SGDIDEDWLEFWR 100 (264)
T ss_pred cchhhhHHHHHHH
Confidence 33 245666654
No 36
>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.74 E-value=1.8e-18 Score=158.82 Aligned_cols=77 Identities=42% Similarity=0.652 Sum_probs=70.5
Q ss_pred CCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCCCc
Q 027187 74 DEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPM 153 (227)
Q Consensus 74 ~~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~ 153 (227)
++.+||.+|+|+++||.+|||+|||++++.|||||+.++ ++++.|++.|+.|.+|||||+||.+|+.||.+|..+..
T Consensus 7 ~e~e~Ya~LNlpkdAt~eeI~~AYrr~~~lfHPDkh~dp---d~K~~AE~~F~~i~~AyEVLsDp~kRaIYD~~G~qGL~ 83 (546)
T KOG0718|consen 7 DEIELYALLNLPKDATDEEIKKAYRRLSRLFHPDKHTDP---DQKKAAEEKFQRIQRAYEVLSDPQKRAIYDNYGEQGLK 83 (546)
T ss_pred chhhHHHHhCCCcccCHHHHHHHHHHHHHhcCCcccCCh---hHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhhcccc
Confidence 456999999999999999999999999999999999754 35788999999999999999999999999999987664
No 37
>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional
Probab=99.73 E-value=7.6e-18 Score=166.01 Aligned_cols=74 Identities=27% Similarity=0.358 Sum_probs=66.9
Q ss_pred CCCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCC
Q 027187 72 WADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVN 151 (227)
Q Consensus 72 ~~~~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~ 151 (227)
.....+||+||||+++|+..+||+|||+||++||||++++ +.+.++|+.|++||+||+||.+|+.||.+|..+
T Consensus 569 ~~~d~dYYdILGVs~dAS~~EIKKAYRKLAlkyHPDKN~~-------~~A~ekFq~I~EAYeVLSDp~kRk~YD~~G~~G 641 (1136)
T PTZ00341 569 EIPDTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSG-------NEGFHKFKKINEAYQILGDIDKKKMYNKFGYDG 641 (1136)
T ss_pred cCCCCChHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-------chHHHHHHHHHHHHHHhCCHHHHHHHhhccccc
Confidence 3456899999999999999999999999999999999865 247889999999999999999999999998755
Q ss_pred C
Q 027187 152 P 152 (227)
Q Consensus 152 ~ 152 (227)
.
T Consensus 642 l 642 (1136)
T PTZ00341 642 I 642 (1136)
T ss_pred c
Confidence 3
No 38
>PRK14289 chaperone protein DnaJ; Provisional
Probab=99.73 E-value=3.9e-18 Score=157.09 Aligned_cols=70 Identities=37% Similarity=0.614 Sum_probs=65.1
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCC
Q 027187 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV 150 (227)
Q Consensus 75 ~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 150 (227)
..|||+||||+++|+.+|||+|||+||++||||+++.+ ++++++|++|++||+||+||.+|+.||+++..
T Consensus 4 ~~~~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~------~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~G~~ 73 (386)
T PRK14289 4 KRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGD------KEAEEKFKEAAEAYDVLSDPDKRSRYDQFGHA 73 (386)
T ss_pred cCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC------hHHHHHHHHHHHHHHHhcCHHHHHHHHHhccc
Confidence 47999999999999999999999999999999998753 56899999999999999999999999998764
No 39
>PRK14300 chaperone protein DnaJ; Provisional
Probab=99.72 E-value=5e-18 Score=155.76 Aligned_cols=68 Identities=41% Similarity=0.654 Sum_probs=63.2
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCC
Q 027187 76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV 150 (227)
Q Consensus 76 ~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 150 (227)
.|||+||||+++||.+|||+|||+++++||||+++. ..++++|++|++||+||+||.+|+.||++|..
T Consensus 3 ~~~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~-------~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~ 70 (372)
T PRK14300 3 QDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTDA-------KDAEKKFKEINAAYDVLKDEQKRAAYDRFGHD 70 (372)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-------cCHHHHHHHHHHHHHHhhhHhHhhHHHhcccc
Confidence 699999999999999999999999999999999863 34788999999999999999999999998764
No 40
>PRK14292 chaperone protein DnaJ; Provisional
Probab=99.72 E-value=8.6e-18 Score=154.09 Aligned_cols=68 Identities=41% Similarity=0.617 Sum_probs=63.6
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCC
Q 027187 76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV 150 (227)
Q Consensus 76 ~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 150 (227)
.|||+||||+++|+.++||+|||+|+++||||+++. ..++++|++|++||+||+||.+|+.||.+|..
T Consensus 2 ~d~y~~Lgv~~~a~~~~ik~ayr~l~~~~hpD~~~~-------~~a~~~~~~i~~Ay~vL~d~~~r~~yd~~G~~ 69 (371)
T PRK14292 2 MDYYELLGVSRTASADEIKSAYRKLALKYHPDRNKE-------KGAAEKFAQINEAYAVLSDAEKRAHYDRFGTA 69 (371)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCC-------hhHHHHHHHHHHHHHHhcchhhhhhHhhcCCc
Confidence 589999999999999999999999999999999864 45889999999999999999999999998864
No 41
>PRK10266 curved DNA-binding protein CbpA; Provisional
Probab=99.71 E-value=8.9e-18 Score=150.39 Aligned_cols=67 Identities=43% Similarity=0.668 Sum_probs=62.5
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCC
Q 027187 76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNR 149 (227)
Q Consensus 76 ~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~ 149 (227)
.|||+||||+++|+.+|||+|||+|+++||||+++. ..++++|++|++||+||+||.+|+.||.++.
T Consensus 4 ~d~y~~Lgv~~~a~~~eik~ayr~la~k~HPD~~~~-------~~~~~~f~~i~~Ay~~L~~~~kr~~yD~~g~ 70 (306)
T PRK10266 4 KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKE-------PDAEARFKEVAEAWEVLSDEQRRAEYDQLWQ 70 (306)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-------ccHHHHHHHHHHHHHHhhhHHHHHHHHHhhc
Confidence 699999999999999999999999999999999754 3588999999999999999999999999763
No 42
>smart00271 DnaJ DnaJ molecular chaperone homology domain.
Probab=99.67 E-value=9.6e-17 Score=109.61 Aligned_cols=59 Identities=51% Similarity=0.720 Sum_probs=54.0
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChh
Q 027187 76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEE 139 (227)
Q Consensus 76 ~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~ 139 (227)
.|||+||||+++++.++||++|+++++++|||++.+. .+.+++.|.+|++||++|+||.
T Consensus 1 ~~~y~vLgl~~~~~~~~ik~ay~~l~~~~HPD~~~~~-----~~~~~~~~~~l~~Ay~~L~~~~ 59 (60)
T smart00271 1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGD-----KEEAEEKFKEINEAYEVLSDPE 59 (60)
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-----hHHHHHHHHHHHHHHHHHcCCC
Confidence 4899999999999999999999999999999998752 3668899999999999999985
No 43
>cd06257 DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.
Probab=99.65 E-value=2.9e-16 Score=105.26 Aligned_cols=55 Identities=47% Similarity=0.695 Sum_probs=51.0
Q ss_pred CccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCC
Q 027187 77 SPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLID 137 (227)
Q Consensus 77 d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsd 137 (227)
|||+||||+++++.++||++|+++++++|||++... +.+.+.|.+|++||++|+|
T Consensus 1 ~~y~vLgl~~~~~~~~ik~~y~~l~~~~HPD~~~~~------~~~~~~~~~l~~Ay~~L~d 55 (55)
T cd06257 1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDD------PEAEEKFKEINEAYEVLSD 55 (55)
T ss_pred ChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc------HHHHHHHHHHHHHHHHhcC
Confidence 699999999999999999999999999999998652 5678999999999999987
No 44
>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.65 E-value=2.2e-16 Score=132.92 Aligned_cols=76 Identities=37% Similarity=0.536 Sum_probs=68.7
Q ss_pred CCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCCCc
Q 027187 74 DEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPM 153 (227)
Q Consensus 74 ~~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~ 153 (227)
..-|+|+||||+++++..|||+|||+|+++|||||++.. ...++.|..|++||+.|+|+..|..|..+|.++..
T Consensus 97 ~~fDPyEILGl~pgas~~eIKkaYR~LSik~HPDK~~~~------~~~e~~~~~I~KAY~aLTD~~sreN~ekYG~PDGp 170 (230)
T KOG0721|consen 97 QKFDPYEILGLDPGASEKEIKKAYRRLSIKYHPDKQPPE------EGDEEFFEAIAKAYQALTDKKSRENWEKYGNPDGP 170 (230)
T ss_pred hcCCcHHhhCCCCCCCHHHHHHHHHHhhhhhCCCcCCCc------chhHHHHHHHHHHHHHhcchhhHHHHHHhCCCCCc
Confidence 457999999999999999999999999999999998763 45678899999999999999999999999987775
Q ss_pred ch
Q 027187 154 KA 155 (227)
Q Consensus 154 ~~ 155 (227)
++
T Consensus 171 q~ 172 (230)
T KOG0721|consen 171 QA 172 (230)
T ss_pred cc
Confidence 44
No 45
>PHA03102 Small T antigen; Reviewed
Probab=99.64 E-value=3.6e-16 Score=126.63 Aligned_cols=70 Identities=20% Similarity=0.239 Sum_probs=62.7
Q ss_pred CCccccccCCCCC--CHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCCCc
Q 027187 76 KSPYETLELERDA--DEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPM 153 (227)
Q Consensus 76 ~d~Y~iLgv~~~a--s~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~ 153 (227)
..+|+||||+++| |.++||+|||++++++|||++++ +++|++|++||++|+|+.+|..||.++.....
T Consensus 5 ~~l~~vLGl~~~A~~s~~eIKkAYr~la~~~HPDkgg~----------~e~~k~in~Ay~~L~d~~~r~~yd~~g~~~~~ 74 (153)
T PHA03102 5 KELMDLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGGD----------EEKMKELNTLYKKFRESVKSLRDLDGEEDSSS 74 (153)
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCch----------hHHHHHHHHHHHHHhhHHHhccccccCCcccc
Confidence 5689999999999 99999999999999999999643 47999999999999999999999999876554
Q ss_pred ch
Q 027187 154 KA 155 (227)
Q Consensus 154 ~~ 155 (227)
..
T Consensus 75 ~~ 76 (153)
T PHA03102 75 EE 76 (153)
T ss_pred cc
Confidence 43
No 46
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
Probab=99.62 E-value=1.1e-15 Score=147.93 Aligned_cols=70 Identities=39% Similarity=0.620 Sum_probs=64.1
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCCC
Q 027187 76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNP 152 (227)
Q Consensus 76 ~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~ 152 (227)
.|||+||||+++|+.++||+|||+|+++||||++.. ..+.++|++|++||++|+||.+|+.||.++..+.
T Consensus 2 ~DYYeVLGVs~dAS~eEIKKAYRKLAKKyHPDKn~~-------~eAeekFqeINEAYEVLSDP~KRa~YD~fG~aG~ 71 (871)
T TIGR03835 2 RDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKA-------PDAASIFAEINEANDVLSNPKKRANYDKYGHDGV 71 (871)
T ss_pred CChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-------hhHHHHHHHHHHHHHHhCCHHHHHHHhhhccccc
Confidence 699999999999999999999999999999999864 3577899999999999999999999999876443
No 47
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=99.61 E-value=1.1e-15 Score=126.97 Aligned_cols=68 Identities=49% Similarity=0.664 Sum_probs=63.4
Q ss_pred CCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccc-hHHHHHHHHHHHHHHcCChhHHHhhccc
Q 027187 74 DEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGE-TAEAKFIKIQAAYELLIDEERRRQYDMD 147 (227)
Q Consensus 74 ~~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~-~a~~~f~~I~~AY~vLsdp~~R~~YD~~ 147 (227)
...+||+||||+++|+..+|++|||+++++||||+++.+ + .+.+.|+.|++||+||+|+..|..||..
T Consensus 4 ~~~~~y~iLgv~~~as~~eik~ayrkla~~~HPD~~~~~------~~~a~~~f~~i~~Ay~vLsd~~~r~~yd~~ 72 (237)
T COG2214 4 DLLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGD------PKVAEEKFKEINEAYEILSDPERRAEYDKI 72 (237)
T ss_pred hhhhHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc------hhHHHHHHHHHHHHHHHhhCHHHHHHhhhh
Confidence 357999999999999999999999999999999999874 3 4889999999999999999999999985
No 48
>PRK05014 hscB co-chaperone HscB; Provisional
Probab=99.56 E-value=5e-15 Score=122.43 Aligned_cols=72 Identities=19% Similarity=0.314 Sum_probs=61.1
Q ss_pred CCccccccCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccC
Q 027187 76 KSPYETLELERD--ADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDN 148 (227)
Q Consensus 76 ~d~Y~iLgv~~~--as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~ 148 (227)
.|||+||||++. ++..+|+++|+++++++|||++.+.+ ..+...+.+.+..|++||+||+||.+|+.|+-..
T Consensus 1 ~~yf~llgl~~~~~~d~~~L~~~yr~l~~~~HPDk~~~~~-~~~~~~a~~~s~~iN~AY~~L~dp~~Ra~Yll~l 74 (171)
T PRK05014 1 MDYFTLFGLPARYDIDTQLLASRYQELQRQFHPDKFANAS-ERERLLAVQQAATINDAYQTLKHPLKRAEYLLSL 74 (171)
T ss_pred CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCc-HHHHHHHHHHHHHHHHHHHHHCChhHHHHHHHHh
Confidence 489999999996 67899999999999999999986642 2223456789999999999999999999998643
No 49
>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms]
Probab=99.56 E-value=3.2e-15 Score=134.09 Aligned_cols=76 Identities=39% Similarity=0.652 Sum_probs=68.8
Q ss_pred CCCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCC
Q 027187 72 WADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV 150 (227)
Q Consensus 72 ~~~~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 150 (227)
....+|||+||||.++|+..||.+|||++|.+||||...+. +++..|+.+|..|..|-+||+||++|+.+|.+-++
T Consensus 390 qs~kRDYYKILGVkRnAsKqEI~KAYRKlAqkWHPDNFqdE---eEKKkAEKKFIDIAAAKEVLsd~EkRrqFDnGeDP 465 (504)
T KOG0624|consen 390 QSGKRDYYKILGVKRNASKQEITKAYRKLAQKWHPDNFQDE---EEKKKAEKKFIDIAAAKEVLSDPEKRRQFDNGEDP 465 (504)
T ss_pred HhccchHHHHhhhcccccHHHHHHHHHHHHHhcCCccccCH---HHHHHHHHhhhhHHHHHHhhcCHHHHhhccCCCCC
Confidence 35679999999999999999999999999999999998763 45678999999999999999999999999998643
No 50
>PRK01356 hscB co-chaperone HscB; Provisional
Probab=99.52 E-value=1.3e-14 Score=119.40 Aligned_cols=71 Identities=21% Similarity=0.294 Sum_probs=60.0
Q ss_pred CCccccccCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCC
Q 027187 76 KSPYETLELERD--ADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNR 149 (227)
Q Consensus 76 ~d~Y~iLgv~~~--as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~ 149 (227)
.|||++|||++. ++..+|+++|+++++++|||++... .+...+.+.+..|++||+||+||.+|+.|+-...
T Consensus 2 ~~yf~llgl~~~f~id~~~L~~aYr~lq~~~HPDk~~~~---~~k~~~~~~s~~in~AY~~L~dp~~Ra~YlL~l~ 74 (166)
T PRK01356 2 QNYFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTL---QEKEQNLIIASELNNAYSTLKDALKRAEYMLLLQ 74 (166)
T ss_pred CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCH---HHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHcc
Confidence 589999999996 7899999999999999999998642 1233455678899999999999999999986543
No 51
>PRK00294 hscB co-chaperone HscB; Provisional
Probab=99.51 E-value=3e-14 Score=117.87 Aligned_cols=74 Identities=23% Similarity=0.366 Sum_probs=63.1
Q ss_pred CCCCccccccCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccC
Q 027187 74 DEKSPYETLELERD--ADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDN 148 (227)
Q Consensus 74 ~~~d~Y~iLgv~~~--as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~ 148 (227)
...|||++|||++. .+..+|+++|+++++++|||++.+.. ..++..+.+.+..||+||+||+||.+|+.|+-..
T Consensus 2 ~~~~~F~l~~l~~~f~id~~~L~~~Yr~Lq~~~HPDk~~~~~-~~e~~~a~~~s~~IN~AY~~L~~p~~Ra~YlL~l 77 (173)
T PRK00294 2 GTPCHFALFDLQPSFRLDLDQLATRYRELAREVHPDRFADAP-EREQRLALERSASLNEAYQTLKSPPRRARYLLAL 77 (173)
T ss_pred CCCChhhhcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCc-HHHHHHHHHHHHHHHHHHHHhCChhhhHHHHHHh
Confidence 35899999999997 57899999999999999999986642 2234457788999999999999999999999644
No 52
>PRK03578 hscB co-chaperone HscB; Provisional
Probab=99.50 E-value=3.1e-14 Score=118.18 Aligned_cols=72 Identities=24% Similarity=0.375 Sum_probs=60.5
Q ss_pred CCCccccccCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhccc
Q 027187 75 EKSPYETLELERD--ADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMD 147 (227)
Q Consensus 75 ~~d~Y~iLgv~~~--as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~ 147 (227)
..|||+||||++. ++..+|+++|+++++++|||++...+ ..++..+.+.+..||+||++|+||.+|+.|+-.
T Consensus 5 ~~dyf~llglp~~f~~d~~~L~~~yr~lq~~~HPD~~~~~~-~~e~~~a~~~s~~iN~AY~tL~~p~~Ra~Yll~ 78 (176)
T PRK03578 5 KDDHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAAAG-DAEKRVAMQWATRANEAYQTLRDPLKRARYLLH 78 (176)
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCC-HHHHHHHHHHHHHHHHHHHHhCChhhHHHHHHH
Confidence 4799999999995 68899999999999999999987642 222334566789999999999999999999953
No 53
>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.44 E-value=8.7e-14 Score=128.00 Aligned_cols=72 Identities=31% Similarity=0.510 Sum_probs=66.6
Q ss_pred CCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCCC
Q 027187 74 DEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNP 152 (227)
Q Consensus 74 ~~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~ 152 (227)
...|+|.+|||+.+++.++||+.||++|...|||||.. +.|++.|+.|+.||++|+|+++|..||..+..+.
T Consensus 233 ~~~daYsvlGl~~d~sd~~lKk~Yrk~A~LVhPDKn~~-------~~A~Eafk~Lq~Afevig~~~kR~eYd~e~~ken 304 (490)
T KOG0720|consen 233 NILDAYSALGLPSDCSDADLKKNYRKKAMLVHPDKNMI-------PRAEEAFKKLQVAFEVIGDSVKRKEYDLELKKEN 304 (490)
T ss_pred cCCCchhhcCCCCCCCHHHHHHHHHhhceEeCCCccCC-------hhHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHH
Confidence 37899999999999999999999999999999999975 6799999999999999999999999999876444
No 54
>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.43 E-value=8.9e-14 Score=119.75 Aligned_cols=74 Identities=35% Similarity=0.576 Sum_probs=67.0
Q ss_pred CCCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCC
Q 027187 72 WADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVN 151 (227)
Q Consensus 72 ~~~~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~ 151 (227)
.+...|.|+||||.++++..||.+|||+|+++||||++.+ +++.+.|..|..||++|.|.+.|..||-.....
T Consensus 29 YCG~enCYdVLgV~Rea~KseIakAYRqLARrhHPDr~r~-------~e~k~~F~~iAtayeilkd~e~rt~ydyaldhp 101 (329)
T KOG0722|consen 29 YCGAENCYDVLGVAREANKSEIAKAYRQLARRHHPDRNRD-------PESKKLFVKIATAYEILKDNETRTQYDYALDHP 101 (329)
T ss_pred cccchhHHHHhhhhhhccHHHHHHHHHHHHHHhCCcccCC-------chhhhhhhhhhcccccccchhhHHhHHHHhcCc
Confidence 5567999999999999999999999999999999999977 456689999999999999999999999887644
Q ss_pred C
Q 027187 152 P 152 (227)
Q Consensus 152 ~ 152 (227)
.
T Consensus 102 d 102 (329)
T KOG0722|consen 102 D 102 (329)
T ss_pred h
Confidence 3
No 55
>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.42 E-value=8.1e-14 Score=127.19 Aligned_cols=79 Identities=34% Similarity=0.557 Sum_probs=70.9
Q ss_pred CCCCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCC
Q 027187 71 NWADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV 150 (227)
Q Consensus 71 ~~~~~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 150 (227)
..+..++||.||||..+++..+||+||+++++.+|||++... +.+++.+|++|.+||.||+||.+|..||.+-+.
T Consensus 368 kkSkRkd~ykilGi~~~as~~eikkayrk~AL~~Hpd~~ags-----q~eaE~kFkevgeAy~il~d~~kr~r~dsg~dl 442 (486)
T KOG0550|consen 368 KKSKRKDWYKILGISRNASDDEIKKAYRKLALVHHPDKNAGS-----QKEAEAKFKEVGEAYTILSDPMKRVRFDSGQDL 442 (486)
T ss_pred HHhhhhhHHHHhhhhhhcccchhhhHHHHHHHHhCCCcCcch-----hHHHHHHHHHHHHHHHHhcCHHHHhhcccccch
Confidence 345678999999999999999999999999999999999874 578999999999999999999999999998665
Q ss_pred CCcc
Q 027187 151 NPMK 154 (227)
Q Consensus 151 ~~~~ 154 (227)
.++.
T Consensus 443 e~~~ 446 (486)
T KOG0550|consen 443 EEVG 446 (486)
T ss_pred hhhc
Confidence 5543
No 56
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional
Probab=99.40 E-value=2.7e-13 Score=119.46 Aligned_cols=65 Identities=35% Similarity=0.486 Sum_probs=56.9
Q ss_pred CCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCcc-ccchHHHHHHHHHHHHHHcCC
Q 027187 73 ADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLE-KGETAEAKFIKIQAAYELLID 137 (227)
Q Consensus 73 ~~~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~-~~~~a~~~f~~I~~AY~vLsd 137 (227)
....++|+||||++++|.++||++||+|+++||||++.+.+.++ ..+.++++|++|++||++|+.
T Consensus 197 ~~~~~ay~vLgv~~~as~~eIk~aYr~L~~~~HPDk~~~~g~~~~~~~~a~ek~~~I~~AYe~L~~ 262 (267)
T PRK09430 197 PTLEDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELIKK 262 (267)
T ss_pred CcHHhHHHHcCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHH
Confidence 34579999999999999999999999999999999987765433 346789999999999999975
No 57
>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.37 E-value=4.8e-13 Score=116.12 Aligned_cols=70 Identities=47% Similarity=0.673 Sum_probs=63.0
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCC
Q 027187 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNR 149 (227)
Q Consensus 75 ~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~ 149 (227)
..|||+||||.++|+.++|++||++++++||||+++.. ...++.+|.+|.+||++|+|+.+|..||.++.
T Consensus 2 ~~d~~~~l~i~~~as~~~i~ka~~~~a~~~hpdk~~~~-----~~~~~~~~~~~~ea~~~ls~~~kr~~~d~~~~ 71 (306)
T KOG0714|consen 2 GKDYYKILGIARSASEEDIKKAYRKLALKYHPDKNPSP-----KEVAEAKFKEIAEAYEVLSDPKKRKIYDQYGE 71 (306)
T ss_pred cccHHHHhCccccccHHHHHHHHHHHHHhhCCCCCCCc-----hhhHHHHHhhhhccccccCCHHHhhhccccCc
Confidence 37999999999999999999999999999999997552 23566689999999999999999999999987
No 58
>PHA02624 large T antigen; Provisional
Probab=99.37 E-value=9.4e-13 Score=126.19 Aligned_cols=83 Identities=23% Similarity=0.380 Sum_probs=67.3
Q ss_pred CCCCccccccCCCCC--CHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhh--cccC-
Q 027187 74 DEKSPYETLELERDA--DEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQY--DMDN- 148 (227)
Q Consensus 74 ~~~d~Y~iLgv~~~a--s~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~Y--D~~~- 148 (227)
+..++|++|||+++| +.++||+|||+++++||||+..+ +++|++|++||++|+|+.+|..| |...
T Consensus 9 e~~elyelLGL~~~A~gs~~eIKkAYRkLAkkyHPDKgGd----------eekfk~Ln~AYevL~d~~k~~r~~fd~~~~ 78 (647)
T PHA02624 9 ESKELMDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKGGD----------EEKMKRLNSLYKKLQEGVKSARQSFGTQDS 78 (647)
T ss_pred HHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCc----------HHHHHHHHHHHHHHhcHHHhhhcccccccc
Confidence 357899999999999 99999999999999999999532 57999999999999999999999 5431
Q ss_pred CCCCcchhHHHHHHHHHh
Q 027187 149 RVNPMKASQAWMEWLIKK 166 (227)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~ 166 (227)
..-+..+...|.+|+..+
T Consensus 79 ~~v~~~~~~~w~~ww~~f 96 (647)
T PHA02624 79 SEIPTYGTPEWEQWWEEF 96 (647)
T ss_pred cCCCCCccccHHHHHHHh
Confidence 111233556788877644
No 59
>PTZ00100 DnaJ chaperone protein; Provisional
Probab=99.34 E-value=1.3e-12 Score=101.05 Aligned_cols=52 Identities=27% Similarity=0.367 Sum_probs=47.0
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcC
Q 027187 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLI 136 (227)
Q Consensus 75 ~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLs 136 (227)
..++|+||||+++++.+|||++||+|++++|||+..+ .+.|++|++||++|.
T Consensus 64 ~~eAy~ILGv~~~As~~eIkkaYRrLa~~~HPDkgGs----------~~~~~kIneAyevL~ 115 (116)
T PTZ00100 64 KSEAYKILNISPTASKERIREAHKQLMLRNHPDNGGS----------TYIASKVNEAKDLLL 115 (116)
T ss_pred HHHHHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----------HHHHHHHHHHHHHHh
Confidence 4799999999999999999999999999999998422 468899999999985
No 60
>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]
Probab=99.33 E-value=1.1e-12 Score=120.55 Aligned_cols=78 Identities=33% Similarity=0.455 Sum_probs=71.9
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCCCc
Q 027187 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPM 153 (227)
Q Consensus 75 ~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~ 153 (227)
--|+|+||||+.+++..+||++||+|+.++||||.+. -+++.+.+.++.+.+|++||+.|+|...|+.|-.+|.++..
T Consensus 97 ~fDPyEILGI~~~ts~rdik~~yr~Ls~KfhpdK~~~-mvn~~rse~Ee~y~~ItkAY~~lTd~k~renyl~yGtPd~p 174 (610)
T COG5407 97 GFDPYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPP-MVNELRSEYEEKYKTITKAYGLLTDKKRRENYLNYGTPDSP 174 (610)
T ss_pred CCChHHhhcccCCCcHHHHHHHHHhheeecChhhcCC-CChhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhcCCCCCC
Confidence 4699999999999999999999999999999999877 45667888999999999999999999999999999987764
No 61
>PRK01773 hscB co-chaperone HscB; Provisional
Probab=99.26 E-value=9.7e-12 Score=102.97 Aligned_cols=72 Identities=22% Similarity=0.322 Sum_probs=62.2
Q ss_pred CCccccccCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccC
Q 027187 76 KSPYETLELERD--ADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDN 148 (227)
Q Consensus 76 ~d~Y~iLgv~~~--as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~ 148 (227)
.|||++|||++. .+...+++.|+.+.+++|||+....+ ..++..+.+.-..||+||.+|+||.+|+.|=-.+
T Consensus 2 ~nyF~lf~lp~~F~iD~~~L~~~y~~Lq~~~HPD~f~~~~-~~eq~~a~~~ss~iN~AY~tLkdPl~RA~YLL~L 75 (173)
T PRK01773 2 NNPFALFDLPVDFQLDNALLSERYLALQKSLHPDNFANSS-AQEQRLAMQKSAEVNDALQILKDPILRAEAIIAL 75 (173)
T ss_pred CChHHhcCCCCCCCCCHHHHHHHHHHHHHHhCcCcccCCC-HHHHHHHHHHHHHHHHHHHHHCChHHHHHHHHHh
Confidence 589999999996 89999999999999999999987753 3334566778899999999999999999997643
No 62
>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB. This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.
Probab=99.10 E-value=1.5e-10 Score=94.47 Aligned_cols=61 Identities=23% Similarity=0.420 Sum_probs=51.2
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCC
Q 027187 88 ADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNR 149 (227)
Q Consensus 88 as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~ 149 (227)
.+..+|+++|+++++++|||+.+..+. .++..+.+.+..|++||+||+||.+|+.|+-.+.
T Consensus 3 iD~~~L~~~yr~lq~~~HPD~~~~~~~-~~~~~a~~~s~~iN~AY~~L~~p~~Ra~ylL~l~ 63 (157)
T TIGR00714 3 LDTQALSLRYQDLQRQYHPDKFASGSA-QEQLAAVQQSTTLNQAYQTLKDPLMRAEYMLSLH 63 (157)
T ss_pred CCHHHHHHHHHHHHHHHCcCCCCCCCh-hhhHHHHHHHHHHHHHHHHhCChhhhHHHHHHhc
Confidence 467899999999999999999866432 2234577899999999999999999999997654
No 63
>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.01 E-value=5.4e-10 Score=93.46 Aligned_cols=67 Identities=30% Similarity=0.529 Sum_probs=60.3
Q ss_pred CCCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHh
Q 027187 72 WADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQ 143 (227)
Q Consensus 72 ~~~~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~ 143 (227)
.-=+-|+|+||.|.|..+.++||+.||+|++..|||+|+++ .+.|...|..|.+||.+|-|+..|..
T Consensus 49 tyfnLNpfeVLqIdpev~~edikkryRklSilVHPDKN~Dd-----~~rAqkAFdivkKA~k~l~n~~~rkr 115 (250)
T KOG1150|consen 49 TYFNLNPFEVLQIDPEVTDEDIKKRYRKLSILVHPDKNPDD-----AERAQKAFDIVKKAYKLLENDKIRKR 115 (250)
T ss_pred cccccChHHHHhcCCCCCHHHHHHHHHhhheeecCCCCccc-----HHHHHHHHHHHHHHHHHHhCHHHHHH
Confidence 33468999999999999999999999999999999999885 47899999999999999999985544
No 64
>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
Probab=99.00 E-value=3.9e-10 Score=98.27 Aligned_cols=71 Identities=32% Similarity=0.387 Sum_probs=62.5
Q ss_pred CCCCccccccCCC---CCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccC
Q 027187 74 DEKSPYETLELER---DADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDN 148 (227)
Q Consensus 74 ~~~d~Y~iLgv~~---~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~ 148 (227)
...|+|.+|||+. .++..+|.++.++.+.+||||+....| .....+.|..|+.||+||+|+.+|..||.--
T Consensus 41 k~~DlYa~lgLskyR~ka~~~qi~kah~kkv~kyHPDk~aa~g----~~~~d~fFk~iqkA~evL~D~~~R~qyDS~d 114 (379)
T COG5269 41 KKVDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGG----NKGCDEFFKLIQKAREVLGDRKLRLQYDSND 114 (379)
T ss_pred hhhhHHHHhchHhhhcCCCcHHHHHHHHHHHHHhCccchhccC----CCCcHHHHHHHHHHHHHhccHHHHhhccccc
Confidence 3489999999996 689999999999999999999985554 3456789999999999999999999999853
No 65
>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones]
Probab=98.38 E-value=4.6e-07 Score=90.93 Aligned_cols=63 Identities=25% Similarity=0.368 Sum_probs=51.8
Q ss_pred HhhccCCCCCCCccccccCCCC----CCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCC
Q 027187 66 VVSAANWADEKSPYETLELERD----ADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLID 137 (227)
Q Consensus 66 ~~~~~~~~~~~d~Y~iLgv~~~----as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsd 137 (227)
..+.+......+.|+||.|+-+ ...+.||++|++||.+||||||+. ..++|..+++||+.|+.
T Consensus 1271 lekKP~~mS~d~A~eiL~i~l~n~~hD~~~KirrqY~kLA~kYHPDKNPE---------GRemFe~VnKAYE~L~~ 1337 (2235)
T KOG1789|consen 1271 LEKKPATMSVDLAREILSVDLTNEEHDKPAKIRRQYYKLAAKYHPDKNPE---------GREMFERVNKAYELLSS 1337 (2235)
T ss_pred HhcCCCccchHHHHHHhccccCCCCcccHHHHHHHHHHHHHHhCCCCCch---------HHHHHHHHHHHHHHHHH
Confidence 3344445566789999999863 355899999999999999999855 57999999999999984
No 66
>KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.33 E-value=3.5e-07 Score=78.47 Aligned_cols=76 Identities=26% Similarity=0.447 Sum_probs=56.8
Q ss_pred cchhhhhhHHHhhccCCCCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHH-H
Q 027187 56 SWFRVNQRRTVVSAANWADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYE-L 134 (227)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~-v 134 (227)
+.|...+-++....-+...-..+|.||||..+|+.++++.+|..|++++|||.... +...+.|.+|.+||. |
T Consensus 27 pyfgiirnrll~~~kske~~~e~fril~v~e~~~adevr~af~~lakq~hpdsgs~-------~adaa~f~qideafrkv 99 (342)
T KOG0568|consen 27 PYFGIIRNRLLHLHKSKEKIMECFRILGVEEGADADEVREAFHDLAKQVHPDSGSE-------EADAARFIQIDEAFRKV 99 (342)
T ss_pred chhhhHHHHHHHHhhhHHHHHHHHHHhcccccCchhHHHHHHHHHHHHcCCCCCCc-------cccHHHHHHHHHHHHHH
Confidence 34444444433332222234689999999999999999999999999999998754 335679999999998 7
Q ss_pred cCCh
Q 027187 135 LIDE 138 (227)
Q Consensus 135 Lsdp 138 (227)
|+..
T Consensus 100 lq~~ 103 (342)
T KOG0568|consen 100 LQEK 103 (342)
T ss_pred HHHH
Confidence 7643
No 67
>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.04 E-value=7.7e-06 Score=62.06 Aligned_cols=53 Identities=28% Similarity=0.265 Sum_probs=45.4
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCCh
Q 027187 76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDE 138 (227)
Q Consensus 76 ~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp 138 (227)
+..-.||||+++++.+.||.|+|+.....|||+...+ -.-.+|+||+++|...
T Consensus 56 ~EA~lIL~v~~s~~k~KikeaHrriM~~NHPD~GGSP----------YlAsKINEAKdlLe~~ 108 (112)
T KOG0723|consen 56 REAALILGVTPSLDKDKIKEAHRRIMLANHPDRGGSP----------YLASKINEAKDLLEGT 108 (112)
T ss_pred HHHHHHhCCCccccHHHHHHHHHHHHHcCCCcCCCCH----------HHHHHHHHHHHHHhcc
Confidence 4455799999999999999999999999999998663 4556799999999753
No 68
>KOG3192 consensus Mitochondrial J-type chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=97.71 E-value=5e-05 Score=61.48 Aligned_cols=74 Identities=20% Similarity=0.314 Sum_probs=58.3
Q ss_pred CCCCCccccccCCC--CCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhccc
Q 027187 73 ADEKSPYETLELER--DADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMD 147 (227)
Q Consensus 73 ~~~~d~Y~iLgv~~--~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~ 147 (227)
+...+||.++|... ..++..++.-|....++.|||+...... .....|.+....|++||.+|.||-+|+.|=.-
T Consensus 5 ~~~~~ff~~Fg~e~~~~~~p~~l~~~~~~~skkL~~d~~~~~~~-~~~d~a~eqSa~lnkAY~TLk~pL~RA~Yilk 80 (168)
T KOG3192|consen 5 GSPSRFFDIFGMELSFKIDPDKLKEKYTDISKKLHPDRPGLSFA-GDTDQASEQSAELNKAYDTLKDPLARARYLLK 80 (168)
T ss_pred chHHHHHHHhccccCCCCCcchhhHHHHHHHHhhCccccccccc-ccchhHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 45689999998654 4566777779999999999999544321 12346888999999999999999999999754
No 69
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=97.26 E-value=0.00015 Score=60.12 Aligned_cols=62 Identities=35% Similarity=0.477 Sum_probs=53.3
Q ss_pred CCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccc-cchHHHHHHHHHHHHHHc
Q 027187 74 DEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEK-GETAEAKFIKIQAAYELL 135 (227)
Q Consensus 74 ~~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~-~~~a~~~f~~I~~AY~vL 135 (227)
...+.|.+||+...++..+|+++|+++...+|||+....+.+.+ -..+.+++++|++||+-+
T Consensus 111 ~~~~~l~~l~~~~~~~~~~i~~~~r~l~~e~~~d~a~~~~~~~e~~~~~~~~~~~i~~a~~~~ 173 (174)
T COG1076 111 DREDALKVLGVEIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYEDI 173 (174)
T ss_pred cchhHHHHhcCchhhhHHHHHHHHHHHHHhcCHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhc
Confidence 34799999999999999999999999999999999877654433 467889999999999854
No 70
>KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only]
Probab=96.73 E-value=0.0014 Score=62.11 Aligned_cols=52 Identities=29% Similarity=0.392 Sum_probs=39.9
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCc-cccchHHHHHHHHHHHHHHc
Q 027187 84 LERDADEEQIKVAYRRLAKFYHPDVYDGRGTL-EKGETAEAKFIKIQAAYELL 135 (227)
Q Consensus 84 v~~~as~~eIK~aYr~la~~~HPDk~~~~~~~-~~~~~a~~~f~~I~~AY~vL 135 (227)
+..-.+.++||++||+.++..||||.+..|.. ..+-.+++.|-.+++|++.-
T Consensus 396 ltDLVtp~~VKKaYrKA~L~VHPDKlqq~gas~~qK~Iaekvfd~l~eawn~f 448 (453)
T KOG0431|consen 396 LTDLVTPAQVKKAYRKAVLCVHPDKLQQKGASLEQKYIAEKVFDALSEAWNKF 448 (453)
T ss_pred hhhccCHHHHHHHHHhhhheeCcccccCCcccHHHHHHHHHHHHHHHHHHHhh
Confidence 44456899999999999999999999887532 22346777777778877654
No 71
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=96.44 E-value=0.0017 Score=53.71 Aligned_cols=72 Identities=25% Similarity=0.409 Sum_probs=54.2
Q ss_pred CccccccCCCCC--CHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCC
Q 027187 77 SPYETLELERDA--DEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNR 149 (227)
Q Consensus 77 d~Y~iLgv~~~a--s~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~ 149 (227)
+++..+|.++.+ ..+.++..|+.+.+.||||+....+. .+...+.+.+..++.||.+|.||-.|..|=-...
T Consensus 2 ~~~~~~~~~~~f~~~~~~l~~~~~~~~~~~~~dr~~~~~~-~~~~~~l~~~~~~~~a~~tLk~~l~ra~~~lal~ 75 (174)
T COG1076 2 DGFVLFGLPRAFQIDLDALKLQYRELQRAYHPDRFGKASE-AEQRKALQQSAEVNPAYQTLKDPLLRAEYLLALA 75 (174)
T ss_pred CcccccccHHHHHHHHhHhhhhHHHHHHhhCcccccccch-HHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHhc
Confidence 345556666543 55678999999999999999866431 1123355789999999999999999999986554
No 72
>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) []. In Saccharomyces cerevisiae (Baker's yeast), Pam16 is required for preprotein translocation into the matrix, but not for protein insertion into the inner membrane [].; PDB: 2GUZ_J.
Probab=94.06 E-value=0.11 Score=41.08 Aligned_cols=54 Identities=22% Similarity=0.189 Sum_probs=38.7
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChh
Q 027187 76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEE 139 (227)
Q Consensus 76 ~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~ 139 (227)
.....||||++..+.++|.+.|.+|-...+|++... --.-..|..|.+.|....
T Consensus 58 ~EA~~ILnv~~~~~~eeI~k~y~~Lf~~Nd~~kGGS----------fYLQSKV~rAKErl~~El 111 (127)
T PF03656_consen 58 DEARQILNVKEELSREEIQKRYKHLFKANDPSKGGS----------FYLQSKVFRAKERLEQEL 111 (127)
T ss_dssp HHHHHHHT--G--SHHHHHHHHHHHHHHT-CCCTS-----------HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCccCHHHHHHHHHHHHhccCCCcCCC----------HHHHHHHHHHHHHHHHHH
Confidence 466799999999999999999999999999997643 234446888888886544
No 73
>PF14687 DUF4460: Domain of unknown function (DUF4460)
Probab=85.83 E-value=1.4 Score=34.00 Aligned_cols=52 Identities=17% Similarity=0.302 Sum_probs=41.0
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChh
Q 027187 86 RDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEE 139 (227)
Q Consensus 86 ~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~ 139 (227)
+..+..+++.|.|.+-++.|||..... ++++...++-++.|+.-.+.|..+.
T Consensus 4 r~~~~~~l~~aLr~Fy~~VHPDlF~~~--P~~k~~Ne~SLk~Ln~~Ld~l~~~~ 55 (112)
T PF14687_consen 4 RNLSSPDLRSALRPFYFAVHPDLFGQH--PEEKQVNEESLKLLNSYLDSLKKRK 55 (112)
T ss_pred hhhhhHHHHHHHHHHHHHhCCcccccC--hHHHHhhHHHHHHHHHHHHHHhccC
Confidence 345678899999999999999987652 4456667778888888888887654
No 74
>PF13446 RPT: A repeated domain in UCH-protein
Probab=84.70 E-value=1.4 Score=29.89 Aligned_cols=27 Identities=26% Similarity=0.530 Sum_probs=25.1
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHH
Q 027187 76 KSPYETLELERDADEEQIKVAYRRLAK 102 (227)
Q Consensus 76 ~d~Y~iLgv~~~as~~eIK~aYr~la~ 102 (227)
.+.|++|||+++.+.+.|-.+|+....
T Consensus 5 ~~Ay~~Lgi~~~~~Dd~Ii~~f~~~~~ 31 (62)
T PF13446_consen 5 EEAYEILGIDEDTDDDFIISAFQSKVN 31 (62)
T ss_pred HHHHHHhCcCCCCCHHHHHHHHHHHHH
Confidence 567999999999999999999999887
No 75
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=82.98 E-value=2.1 Score=36.16 Aligned_cols=40 Identities=38% Similarity=0.449 Sum_probs=31.5
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCCh
Q 027187 85 ERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDE 138 (227)
Q Consensus 85 ~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp 138 (227)
+++|+.|||.+|+.++..+|--| ++.-.+|-.||+.+.=.
T Consensus 1 S~~ASfeEIq~Arn~ll~~y~gd--------------~~~~~~IEaAYD~ILM~ 40 (194)
T PF11833_consen 1 SEDASFEEIQAARNRLLAQYAGD--------------EKSREAIEAAYDAILME 40 (194)
T ss_pred CCCCCHHHHHHHHHHHHHHhcCC--------------HHHHHHHHHHHHHHHHH
Confidence 47899999999999999999444 24566799999876433
No 76
>KOG0724 consensus Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains [Posttranslational modification, protein turnover, chaperones]
Probab=79.81 E-value=1.5 Score=39.67 Aligned_cols=59 Identities=32% Similarity=0.389 Sum_probs=44.0
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccC
Q 027187 88 ADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDN 148 (227)
Q Consensus 88 as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~ 148 (227)
++..+|..+|+..++..||++.... .......++.++.|.+||.||.+...|...|...
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~k~i~ka~~i~~~~~~~~t~~~~~ 62 (335)
T KOG0724|consen 4 ASEDELRLAYREMALKSHPEKKSFY--EKLSLWTEEEFKKIEKALAILDDDEPRRTPDSWD 62 (335)
T ss_pred ccHHHHHHHHHHHhhhcCcHHHHHH--HHhhhhHHHHHHHHHHHHHHHhccccccchhhhh
Confidence 5678899999999999999987410 0001245678999999999999976666666543
No 77
>COG5552 Uncharacterized conserved protein [Function unknown]
Probab=47.79 E-value=67 Score=23.11 Aligned_cols=36 Identities=8% Similarity=0.081 Sum_probs=28.8
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCC
Q 027187 76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDG 111 (227)
Q Consensus 76 ~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~ 111 (227)
+|.-+++|++|-|+..||+.|-++.+++..--..+.
T Consensus 3 RNIk~LfnfdPPAT~~EvrdAAlQfVRKlSGtT~PS 38 (88)
T COG5552 3 RNIKELFNFDPPATPVEVRDAALQFVRKLSGTTHPS 38 (88)
T ss_pred cchHHHhCCCCCCCcHHHHHHHHHHHHHhcCCCCcc
Confidence 455678999999999999999999888875554443
No 78
>PF07709 SRR: Seven Residue Repeat; InterPro: IPR011714 This repeat is found in some Plasmodium and Theileria proteins.
Probab=44.47 E-value=15 Score=17.58 Aligned_cols=13 Identities=54% Similarity=0.754 Sum_probs=9.7
Q ss_pred HHHHHHHHHHHcC
Q 027187 124 KFIKIQAAYELLI 136 (227)
Q Consensus 124 ~f~~I~~AY~vLs 136 (227)
.|..+..||+.|+
T Consensus 2 ~~~~V~~aY~~l~ 14 (14)
T PF07709_consen 2 KFEKVKNAYEQLS 14 (14)
T ss_pred cHHHHHHHHHhcC
Confidence 4777888888774
No 79
>KOG3442 consensus Uncharacterized conserved protein [Function unknown]
Probab=29.39 E-value=70 Score=25.24 Aligned_cols=34 Identities=15% Similarity=0.219 Sum_probs=28.8
Q ss_pred CccccccCCCCCCHHHHHHHHHHHHHHhCCCCCC
Q 027187 77 SPYETLELERDADEEQIKVAYRRLAKFYHPDVYD 110 (227)
Q Consensus 77 d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~ 110 (227)
..-.||+|++..+.++|.+.|..|-....+.+..
T Consensus 60 Ea~qILnV~~~ln~eei~k~yehLFevNdkskGG 93 (132)
T KOG3442|consen 60 EAQQILNVKEPLNREEIEKRYEHLFEVNDKSKGG 93 (132)
T ss_pred HHhhHhCCCCCCCHHHHHHHHHHHHhccCcccCc
Confidence 4458999999999999999999999877766643
No 80
>PF12434 Malate_DH: Malate dehydrogenase enzyme
Probab=28.54 E-value=66 Score=18.53 Aligned_cols=17 Identities=29% Similarity=0.411 Sum_probs=14.5
Q ss_pred HHHHHHHHHHHHHHhCC
Q 027187 90 EEQIKVAYRRLAKFYHP 106 (227)
Q Consensus 90 ~~eIK~aYr~la~~~HP 106 (227)
.++.+.+-|+.++.||-
T Consensus 10 ~~~~r~~lR~AALeYHe 26 (28)
T PF12434_consen 10 KEDKRAQLRQAALEYHE 26 (28)
T ss_pred hHHHHHHHHHHHHHhcc
Confidence 37788999999999993
No 81
>PF10041 DUF2277: Uncharacterized conserved protein (DUF2277); InterPro: IPR018735 Members of this family of hypothetical bacterial proteins have no known function.
Probab=27.69 E-value=2.1e+02 Score=20.58 Aligned_cols=36 Identities=14% Similarity=0.045 Sum_probs=27.7
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCC
Q 027187 76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDG 111 (227)
Q Consensus 76 ~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~ 111 (227)
+|--.+.|+.|-++.+||..|-.+.++|..=-..+.
T Consensus 3 RnI~~L~~fePpaT~~EI~aAAlQyVRKvSG~~~Ps 38 (78)
T PF10041_consen 3 RNIKTLRNFEPPATDEEIRAAALQYVRKVSGFRKPS 38 (78)
T ss_pred cchhhhcCCCCCCCHHHHHHHHHHHHHHHccCCCcc
Confidence 344456788899999999999999999876554443
No 82
>cd00084 HMG-box High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and transcription factors. HMGs bind to the minor groove of DNA and have been classified by DNA binding preferences. Two phylogenically distinct groups of Class I proteins bind DNA in a sequence specific fashion and contain a single HMG box. One group (SOX-TCF) includes transcription factors, TCF-1, -3, -4; and also SRY and LEF-1, which bind four-way DNA junctions and duplex DNA targets. The second group (MATA) includes fungal mating type gene products MC, MATA1 and Ste11. Class II and III proteins (HMGB-UBF) bind DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal proteins, HMG1 and HMG2, which bind to bent or distorted DNA such as four-way DNA junctions, synthetic DNA cruciforms, kinked cisplatin-modified DNA, DNA bulges, cross-overs in supercoiled DNA, and can cause looping of linear DNA. Class III member
Probab=23.54 E-value=2.1e+02 Score=18.30 Aligned_cols=42 Identities=14% Similarity=0.132 Sum_probs=29.9
Q ss_pred HHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcc
Q 027187 94 KVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDM 146 (227)
Q Consensus 94 K~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~ 146 (227)
.+.++...+.-||+.. ..+....|.+.+..|++.++...++.
T Consensus 12 ~~~~~~~~~~~~~~~~-----------~~~i~~~~~~~W~~l~~~~k~~y~~~ 53 (66)
T cd00084 12 SQEHRAEVKAENPGLS-----------VGEISKILGEMWKSLSEEEKKKYEEK 53 (66)
T ss_pred HHHHHHHHHHHCcCCC-----------HHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 4556666777888843 35688889999999998655554443
No 83
>cd01388 SOX-TCF_HMG-box SOX-TCF_HMG-box, class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and transcription factor-like proteins, TCF-1, -3, -4, and LEF-1. They appear to bind the minor groove of the A/T C A A A G/C-motif.
Probab=21.22 E-value=2.4e+02 Score=19.08 Aligned_cols=41 Identities=20% Similarity=0.105 Sum_probs=29.5
Q ss_pred HHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcc
Q 027187 95 VAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDM 146 (227)
Q Consensus 95 ~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~ 146 (227)
+..+...+.-||+.. ..+..+.|.+.+..|++.++...+|.
T Consensus 14 ~~~r~~~~~~~p~~~-----------~~eisk~l~~~Wk~ls~~eK~~y~~~ 54 (72)
T cd01388 14 KRHRRKVLQEYPLKE-----------NRAISKILGDRWKALSNEEKQPYYEE 54 (72)
T ss_pred HHHHHHHHHHCCCCC-----------HHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 445566667788853 34678889999999998876655544
No 84
>cd01780 PLC_epsilon_RA Ubiquitin-like domain of Phosphatidylinositide-specific phospholipase. PLC_epsilon_RA Phosphatidylinositide-specific phospholipase C (PLC) is a signaling enzyme that hydrolyzes membrane phospholipids to generate inositol triphosphate. PLC-epsilon represents a novel forth class of PLC that has a PLC catalytic core domain, a CDC25 guanine nucleotide exchange factor domain and two RA (Ras-association) domains of which the second is critical for Ras activation of the enzyme.
Probab=20.77 E-value=1.1e+02 Score=22.90 Aligned_cols=35 Identities=17% Similarity=0.206 Sum_probs=28.0
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCC
Q 027187 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVY 109 (227)
Q Consensus 75 ~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~ 109 (227)
+..+|.||-++...|..+|-+.=--.|++-+||-.
T Consensus 10 ~dqP~~il~a~~~STa~Dvi~Qal~KA~rs~~~~~ 44 (93)
T cd01780 10 PDQPYAILRAPRVSTAQDVIQQTLCKARRSNPNPS 44 (93)
T ss_pred CCCCeeEEEccccccHHHHHHHHHHHhccCCCCcc
Confidence 46899999999999988877766666777777754
No 85
>COG2879 Uncharacterized small protein [Function unknown]
Probab=20.43 E-value=1.9e+02 Score=20.12 Aligned_cols=28 Identities=32% Similarity=0.240 Sum_probs=19.0
Q ss_pred HHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHH
Q 027187 96 AYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAA 131 (227)
Q Consensus 96 aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~A 131 (227)
.|-.-.++.|||+.+- .-++.|.+-.+|
T Consensus 27 nYVehmr~~hPd~p~m--------T~~EFfrec~da 54 (65)
T COG2879 27 NYVEHMRKKHPDKPPM--------TYEEFFRECQDA 54 (65)
T ss_pred HHHHHHHHhCcCCCcc--------cHHHHHHHHHHh
Confidence 5777889999999754 245566655444
Done!