BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027189
(227 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q75UG4|P4HA3_BOVIN Prolyl 4-hydroxylase subunit alpha-3 OS=Bos taurus GN=P4HA3 PE=2
SV=1
Length = 544
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 76/152 (50%), Gaps = 10/152 (6%)
Query: 70 IQSIPFQVLSWRPRALYFPNFASAEQCQSIIATAKKRLKPSQLALRQGETVESTKGTRTS 129
+Q + +V+ P + + +F S + Q+I A+ L+ S +A GE + R S
Sbjct: 334 LQPVRKEVIHLEPYVVLYHDFVSDAEAQTIRGLAEPWLQRSVVA--SGEKQLPVE-YRIS 390
Query: 130 SGTFISASEDKTGILELIEHKIARATMLP--QTHGEAFNVLRYEIGQKYDSHYD-AFNPA 186
++ + D +L ++H+IA T L + E V+ Y IG Y+ H+D A +P+
Sbjct: 391 KSAWLKDTVDP--VLVTLDHRIAALTGLDVQPPYAEYLQVVNYGIGGHYEPHFDHATSPS 448
Query: 187 E--YGPQMSQRLASFLLYLSDVEEGGETMFPF 216
Y R+A+F++YLS VE GG T F +
Sbjct: 449 SPLYRMNSGNRVATFMIYLSSVEAGGATAFIY 480
>sp|Q6W3F0|P4HA3_MOUSE Prolyl 4-hydroxylase subunit alpha-3 OS=Mus musculus GN=P4ha3 PE=2
SV=1
Length = 542
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 74/146 (50%), Gaps = 10/146 (6%)
Query: 76 QVLSWRPRALYFPNFASAEQCQSIIATAKKRLKPSQLALRQGETVESTKGTRTSSGTFIS 135
+V+ RP + +F S E+ Q I A+ L+ S +A GE + R S ++
Sbjct: 338 EVVHLRPLIALYHDFVSDEEAQKIRELAEPWLQRSVVA--SGEKQLQVE-YRISKSAWLK 394
Query: 136 ASEDKTGILELIEHKIARATMLP--QTHGEAFNVLRYEIGQKYDSHYD-AFNPAE--YGP 190
+ D +L ++H+IA T L + E V+ Y IG Y+ H+D A +P+ Y
Sbjct: 395 DTVDP--MLVTLDHRIAALTGLDIQPPYAEYLQVVNYGIGGHYEPHFDHATSPSSPLYRM 452
Query: 191 QMSQRLASFLLYLSDVEEGGETMFPF 216
+ R+A+F++YLS VE GG T F +
Sbjct: 453 KSGNRVATFMIYLSSVEAGGATAFIY 478
>sp|P16924|P4HA1_CHICK Prolyl 4-hydroxylase subunit alpha-1 OS=Gallus gallus GN=P4HA1 PE=1
SV=1
Length = 516
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 17/144 (11%)
Query: 81 RPRALYFPNFASAEQCQSIIATAKKRLKPSQLALRQGETVE-STKGTRTSSGTFISASED 139
+PR + F + S E+ +++ AK RL S+ + ET + +T R S ++S E
Sbjct: 316 KPRIVRFLDIISDEEIETVKELAKPRL--SRATVHDPETGKLTTAHYRVSKSAWLSGYE- 372
Query: 140 KTGILELIEHKIARATMLPQTHGEAFNVLRYEIGQKYDSHYD--------AFNPAEYGPQ 191
+ ++ I +I T L + E V Y +G +Y+ H+D AF G
Sbjct: 373 -SPVVSRINTRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFGRKDEPDAFKELGTG-- 429
Query: 192 MSQRLASFLLYLSDVEEGGETMFP 215
R+A++L Y+SDV GG T+FP
Sbjct: 430 --NRIATWLFYMSDVSAGGATVFP 451
>sp|P54001|P4HA1_RAT Prolyl 4-hydroxylase subunit alpha-1 OS=Rattus norvegicus GN=P4ha1
PE=2 SV=2
Length = 534
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 17/144 (11%)
Query: 81 RPRALYFPNFASAEQCQSIIATAKKRLKPSQLALRQGETVE-STKGTRTSSGTFISASED 139
+PR + F + S + + + AK RL S+ + ET + +T R S ++S ED
Sbjct: 334 KPRIIRFHDIISDAEIEIVKDLAKPRL--SRATVHDPETGKLTTAQYRVSKSAWLSGYED 391
Query: 140 KTGILELIEHKIARATMLPQTHGEAFNVLRYEIGQKYDSHYD--------AFNPAEYGPQ 191
++ I +I T L + E V Y +G +Y+ H+D AF G
Sbjct: 392 P--VVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFRELGTG-- 447
Query: 192 MSQRLASFLLYLSDVEEGGETMFP 215
R+A++L Y+SDV GG T+FP
Sbjct: 448 --NRIATWLFYMSDVSAGGATVFP 469
>sp|Q60715|P4HA1_MOUSE Prolyl 4-hydroxylase subunit alpha-1 OS=Mus musculus GN=P4ha1 PE=2
SV=2
Length = 534
Score = 54.3 bits (129), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 15/143 (10%)
Query: 81 RPRALYFPNFASAEQCQSIIATAKKRLKPSQLALRQGETVESTKGTRTSSGTFISASEDK 140
+PR + F + S + + + AK RL+ + ++ +E+ R S ++S ED
Sbjct: 334 KPRIIRFHDIISDAEIEIVKDLAKPRLRRATISNPVTGALETVH-YRISKSAWLSGYEDP 392
Query: 141 TGILELIEHKIARATMLPQTHGEAFNVLRYEIGQKYDSHYD--------AFNPAEYGPQM 192
++ I +I T L + E V Y +G +Y+ H+D AF G
Sbjct: 393 --VVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFRELGTG--- 447
Query: 193 SQRLASFLLYLSDVEEGGETMFP 215
R+A++L Y+SDV GG T+FP
Sbjct: 448 -NRIATWLFYMSDVSAGGATVFP 469
>sp|Q5ZLK5|P4HA2_CHICK Prolyl 4-hydroxylase subunit alpha-2 OS=Gallus gallus GN=P4HA2 PE=2
SV=1
Length = 534
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 69/138 (50%), Gaps = 9/138 (6%)
Query: 82 PRALYFPNFASAEQCQSIIATAKKRLKPSQLALRQGET-VESTKGTRTSSGTFISASEDK 140
P + + + S E+ + I AK +L ++ +R +T V + R S +++ ED
Sbjct: 337 PHIVRYYDVMSDEEIEKIKQLAKPKL--ARATVRDPKTGVLTVASYRVSKSSWLE--EDD 392
Query: 141 TGILELIEHKIARATMLPQTHGEAFNVLRYEIGQKYDSHYDAFNPAEYGPQMS---QRLA 197
++ + ++ + T L E V Y +G +Y+ H+D F+ + + RLA
Sbjct: 393 DPVVAKVNQRMQQITGLTVKTAELLQVANYGMGGQYEPHFD-FSRRPFDSTLKSEGNRLA 451
Query: 198 SFLLYLSDVEEGGETMFP 215
+FL Y+SDVE GG T+FP
Sbjct: 452 TFLNYMSDVEAGGATVFP 469
>sp|Q5RAG8|P4HA1_PONAB Prolyl 4-hydroxylase subunit alpha-1 OS=Pongo abelii GN=P4HA1 PE=2
SV=1
Length = 534
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 15/143 (10%)
Query: 81 RPRALYFPNFASAEQCQSIIATAKKRLKPSQLALRQGETVESTKGTRTSSGTFISASEDK 140
+PR + F + S + + + AK RL+ + ++ +E+ R S ++S E+
Sbjct: 334 KPRIIRFHDIISDAEIEIVKDLAKPRLRRATISNPITGDLETVH-YRISKSAWLSGYENP 392
Query: 141 TGILELIEHKIARATMLPQTHGEAFNVLRYEIGQKYDSHYD--------AFNPAEYGPQM 192
++ I +I T L + E V Y +G +Y+ H+D AF G
Sbjct: 393 --VVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFKELGTG--- 447
Query: 193 SQRLASFLLYLSDVEEGGETMFP 215
R+A++L Y+SDV GG T+FP
Sbjct: 448 -NRIATWLFYMSDVSAGGATVFP 469
>sp|P13674|P4HA1_HUMAN Prolyl 4-hydroxylase subunit alpha-1 OS=Homo sapiens GN=P4HA1 PE=1
SV=2
Length = 534
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 15/143 (10%)
Query: 81 RPRALYFPNFASAEQCQSIIATAKKRLKPSQLALRQGETVESTKGTRTSSGTFISASEDK 140
+PR + F + S + + + AK RL+ + ++ +E+ R S ++S E+
Sbjct: 334 KPRIIRFHDIISDAEIEIVKDLAKPRLRRATISNPITGDLETVH-YRISKSAWLSGYENP 392
Query: 141 TGILELIEHKIARATMLPQTHGEAFNVLRYEIGQKYDSHYD--------AFNPAEYGPQM 192
++ I +I T L + E V Y +G +Y+ H+D AF G
Sbjct: 393 --VVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFKELGTG--- 447
Query: 193 SQRLASFLLYLSDVEEGGETMFP 215
R+A++L Y+SDV GG T+FP
Sbjct: 448 -NRIATWLFYMSDVSAGGATVFP 469
>sp|Q7Z4N8|P4HA3_HUMAN Prolyl 4-hydroxylase subunit alpha-3 OS=Homo sapiens GN=P4HA3 PE=1
SV=1
Length = 544
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 10/152 (6%)
Query: 70 IQSIPFQVLSWRPRALYFPNFASAEQCQSIIATAKKRLKPSQLALRQGETVESTKGTRTS 129
+Q I +V+ P + +F S + Q I A+ L+ S +A GE + R S
Sbjct: 334 LQPIRKEVIHLEPYIALYHDFVSDSEAQKIRELAEPWLQRSVVA--SGEKQLQVE-YRIS 390
Query: 130 SGTFISASEDKTGILELIEHKIARATMLP--QTHGEAFNVLRYEIGQKYDSHYD-AFNPA 186
++ + D L + H+IA T L + E V+ Y IG Y+ H+D A +P+
Sbjct: 391 KSAWLKDTVDPK--LVTLNHRIAALTGLDVRPPYAEYLQVVNYGIGGHYEPHFDHATSPS 448
Query: 187 E--YGPQMSQRLASFLLYLSDVEEGGETMFPF 216
Y + R+A+F++YLS VE GG T F +
Sbjct: 449 SPLYRMKSGNRVATFMIYLSSVEAGGATAFIY 480
>sp|O15460|P4HA2_HUMAN Prolyl 4-hydroxylase subunit alpha-2 OS=Homo sapiens GN=P4HA2 PE=1
SV=1
Length = 535
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 65/139 (46%), Gaps = 9/139 (6%)
Query: 82 PRALYFPNFASAEQCQSIIATAKKRLKPSQLALRQGET-VESTKGTRTSSGTFISASEDK 140
P + + + S E+ + I AK +L ++ +R +T V + R S +++ ED
Sbjct: 336 PHIVRYYDVMSDEEIERIKEIAKPKL--ARATVRDPKTGVLTVASYRVSKSSWLE--EDD 391
Query: 141 TGILELIEHKIARATMLPQTHGEAFNVLRYEIGQKYDSHYDAFNPAEYGP----QMSQRL 196
++ + ++ T L E V Y +G +Y+ H+D E R+
Sbjct: 392 DPVVARVNRRMQHITGLTVKTAELLQVANYGVGGQYEPHFDFSRNDERDTFKHLGTGNRV 451
Query: 197 ASFLLYLSDVEEGGETMFP 215
A+FL Y+SDVE GG T+FP
Sbjct: 452 ATFLNYMSDVEAGGATVFP 470
>sp|Q1RMU3|P4HA1_BOVIN Prolyl 4-hydroxylase subunit alpha-1 OS=Bos taurus GN=P4HA1 PE=1
SV=1
Length = 534
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 15/143 (10%)
Query: 81 RPRALYFPNFASAEQCQSIIATAKKRLKPSQLALRQGETVESTKGTRTSSGTFISASEDK 140
+PR + F + S + + + AK RL+ + ++ +E+ R S ++S E+
Sbjct: 334 KPRIIRFHDIISDAEIEVVKDLAKPRLRRATISNPITGDLETVH-YRISKSAWLSGYENP 392
Query: 141 TGILELIEHKIARATMLPQTHGEAFNVLRYEIGQKYDSHYD--------AFNPAEYGPQM 192
++ I +I T L + E V Y +G +Y+ H+D AF G
Sbjct: 393 --VVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFKELGTG--- 447
Query: 193 SQRLASFLLYLSDVEEGGETMFP 215
R+A++L Y+SDV GG T+FP
Sbjct: 448 -NRIATWLFYMSDVLAGGATVFP 469
>sp|Q20065|P4HA2_CAEEL Prolyl 4-hydroxylase subunit alpha-2 OS=Caenorhabditis elegans
GN=phy-2 PE=1 SV=1
Length = 539
Score = 50.8 bits (120), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 64/151 (42%), Gaps = 17/151 (11%)
Query: 73 IPFQVLSWRPRALYFPNFASAEQCQSIIATAKKRLKPSQLALRQGETVESTKGTRTSSGT 132
I ++L + P A+ F N + + I A +LK + TV+++K T
Sbjct: 316 IKVEILRFDPLAVLFKNVIHDSEIEVIKELASPKLKRA--------TVQNSKTGELEHAT 367
Query: 133 F-ISASE----DKTGILELIEHKIARATMLPQTHGEAFNVLRYEIGQKYDSHYDAFNPAE 187
+ IS S D +++ + +I T L Q E V Y +G YD H+D E
Sbjct: 368 YRISKSAWLKGDLDPVIDRVNRRIEDFTNLNQATSEELQVANYGLGGHYDPHFDFARKEE 427
Query: 188 YGP----QMSQRLASFLLYLSDVEEGGETMF 214
R+A+ L Y+S E GG T+F
Sbjct: 428 KNAFKTLNTGNRIATVLFYMSQPERGGATVF 458
>sp|Q60716|P4HA2_MOUSE Prolyl 4-hydroxylase subunit alpha-2 OS=Mus musculus GN=P4ha2 PE=2
SV=1
Length = 537
Score = 50.8 bits (120), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 17/143 (11%)
Query: 82 PRALYFPNFASAEQCQSIIATAKKRLKPSQLALRQGET-VESTKGTRTSSGTFISASEDK 140
P + + + S E+ + I AK +L ++ +R +T V + R S +++ ED
Sbjct: 338 PHIVRYYDVMSDEEIERIKEIAKPKL--ARATVRDPKTGVLTVASYRVSKSSWLE--EDD 393
Query: 141 TGILELIEHKIARATMLPQTHGEAFNVLRYEIGQKYDSHYD--------AFNPAEYGPQM 192
++ + ++ T L E V Y +G +Y+ H+D AF G
Sbjct: 394 DPVVARVNRRMQHITGLTVKTAELLQVANYGMGGQYEPHFDFSRSDDEDAFKRLGTG--- 450
Query: 193 SQRLASFLLYLSDVEEGGETMFP 215
R+A+FL Y+SDVE GG T+FP
Sbjct: 451 -NRVATFLNYMSDVEAGGATVFP 472
>sp|Q6W3E9|P4HA3_RAT Prolyl 4-hydroxylase subunit alpha-3 OS=Rattus norvegicus GN=P4ha3
PE=2 SV=1
Length = 544
Score = 50.8 bits (120), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 71/146 (48%), Gaps = 10/146 (6%)
Query: 76 QVLSWRPRALYFPNFASAEQCQSIIATAKKRLKPSQLALRQGETVESTKGTRTSSGTFIS 135
+V+ RP + +F S E+ Q I A+ L+ S +A GE + R S ++
Sbjct: 340 EVIHLRPLVALYHDFVSDEEAQKIRELAEPWLQRSVVA--SGEKQLQVE-YRISKSAWLK 396
Query: 136 ASEDKTGILELIEHKIARATMLP--QTHGEAFNVLRYEIGQKYDSHYD-AFNPAE--YGP 190
+ D +L ++ +IA T L + E V+ Y IG Y+ H+D A +P+ Y
Sbjct: 397 DTVDP--VLVTLDRRIAALTGLDIQPPYAEYLQVVNYGIGGHYEPHFDHATSPSSPLYKM 454
Query: 191 QMSQRLASFLLYLSDVEEGGETMFPF 216
+ R A+ ++YLS VE GG T F +
Sbjct: 455 KSGNRAATLMIYLSSVEAGGATAFIY 480
>sp|Q5UP57|P4H_MIMIV Putative prolyl 4-hydroxylase OS=Acanthamoeba polyphaga mimivirus
GN=MIMI_L593 PE=1 SV=1
Length = 242
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 14/132 (10%)
Query: 89 NFASAEQCQSIIATAKKRLKPSQLALRQGETVESTKGTRTSSGTFISASEDKTGILELIE 148
N + +CQ I+ A +L SQ+ + K R S +IS + +++ I
Sbjct: 65 NLINPTKCQEIMQFANGKLFDSQVL------SGTDKNIRNSQQMWISKN---NPMVKPIF 115
Query: 149 HKIARATMLPQTHGEAFNVLRYEIGQKYDSHYDAF-----NPAEYGPQMSQRLASFLLYL 203
I R +P + E V+RY Q Y+ H+D+ +E+ + QR+ + L+YL
Sbjct: 116 ENICRQFNVPFDNAEDLQVVRYLPNQYYNEHHDSCCDSSKQCSEFIERGGQRILTVLIYL 175
Query: 204 SDVEEGGETMFP 215
++ G T FP
Sbjct: 176 NNEFSDGHTYFP 187
>sp|Q10576|P4HA1_CAEEL Prolyl 4-hydroxylase subunit alpha-1 OS=Caenorhabditis elegans
GN=dpy-18 PE=1 SV=2
Length = 559
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 15/150 (10%)
Query: 73 IPFQVLSWRPRALYFPNFASAEQCQSIIATAKKRLKPSQLALRQGETVESTKGTRTSSGT 132
I ++ + P A+ F + S ++ +I AK +L + + +S G ++
Sbjct: 319 IKVEIKRFNPLAVLFKDVISDDEVAAIQELAKPKLARATVH-------DSVTGKLVTATY 371
Query: 133 FISAS----EDKTGILELIEHKIARATMLPQTHGEAFNVLRYEIGQKYDSHYDAFNPAEY 188
IS S E + ++E + +I T L E + Y IG YD H+D E
Sbjct: 372 RISKSAWLKEWEGDVVETVNKRIGYMTNLEMETAEELQIANYGIGGHYDPHFDHAKKEES 431
Query: 189 GPQMS----QRLASFLLYLSDVEEGGETMF 214
S R+A+ L Y+S GG T+F
Sbjct: 432 KSFESLGTGNRIATVLFYMSQPSHGGGTVF 461
>sp|Q8BG58|P4HTM_MOUSE Transmembrane prolyl 4-hydroxylase OS=Mus musculus GN=P4htm PE=2
SV=1
Length = 503
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 49/112 (43%), Gaps = 17/112 (15%)
Query: 121 ESTKGTRTSSGTFISASEDKTGILELIEHKIARATML-PQT--HGEAFNVLRYEIGQKYD 177
ES + R S T++ E ++ I ++ R T L P+ E V+RY G Y
Sbjct: 268 ESNELVRNSHHTWLHQGEGAHHVMRAIRQRVLRLTRLSPEIVEFSEPLQVVRYGEGGHYH 327
Query: 178 SHYDA-------------FNPAEYGP-QMSQRLASFLLYLSDVEEGGETMFP 215
+H D+ E P + S R + L YL++V GGET+FP
Sbjct: 328 AHVDSGPVYPETICSHTKLVANESVPFETSCRYMTVLFYLNNVTGGGETVFP 379
>sp|Q9NXG6|P4HTM_HUMAN Transmembrane prolyl 4-hydroxylase OS=Homo sapiens GN=P4HTM PE=1
SV=2
Length = 502
Score = 40.8 bits (94), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 50/112 (44%), Gaps = 17/112 (15%)
Query: 121 ESTKGTRTSSGTFISASEDKTGILELIEHKIARATML-PQTH--GEAFNVLRYEIGQKYD 177
ES++ R S T++ E I+ I ++ R T L P+ E V+RY G Y
Sbjct: 267 ESSELVRNSHHTWLYQGEGAHHIMRAIRQRVLRLTRLSPEIVELSEPLQVVRYGEGGHYH 326
Query: 178 SHYDA-------------FNPAEYGP-QMSQRLASFLLYLSDVEEGGETMFP 215
+H D+ E P + S R + L YL++V GGET+FP
Sbjct: 327 AHVDSGPVYPETICSHTKLVANESVPFETSCRYMTVLFYLNNVTGGGETVFP 378
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,994,713
Number of Sequences: 539616
Number of extensions: 3245145
Number of successful extensions: 8004
Number of sequences better than 100.0: 19
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 7982
Number of HSP's gapped (non-prelim): 28
length of query: 227
length of database: 191,569,459
effective HSP length: 113
effective length of query: 114
effective length of database: 130,592,851
effective search space: 14887585014
effective search space used: 14887585014
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)