BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027190
(227 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FVC1|SVP_ARATH MADS-box protein SVP OS=Arabidopsis thaliana GN=SVP PE=1 SV=1
Length = 240
Score = 268 bits (685), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 142/239 (59%), Positives = 183/239 (76%), Gaps = 15/239 (6%)
Query: 1 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSS 60
MAREKI+IRKIDN TARQVTFSKRRRGLFKKAEELSVLCDA+V +IIFS+TGKLFE SS
Sbjct: 1 MAREKIQIRKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEFCSS 60
Query: 61 SMKDIIARYNMHSSNISKLNHPSLELQL-ENSKYLSLSREIADKSRQLRQMRGEDLHGLT 119
SMK+++ R+N+ S N+ KL+ PSLELQL ENS + +S+EIADKS +LRQMRGE+L GL
Sbjct: 61 SMKEVLERHNLQSKNLEKLDQPSLELQLVENSDHARMSKEIADKSHRLRQMRGEELQGLD 120
Query: 120 IEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLKQKVAS-SCKGKR 178
IEELQ LE LE GL+RV++TK D+IM+EIS L++KG +L++ENK L+Q+ + + +R
Sbjct: 121 IEELQQLEKALETGLTRVIETKSDKIMSEISELQKKGMQLMDENKRLRQQGTQLTEENER 180
Query: 179 VVLV------------DSDIAIQEEGMSSESVNNVCSCSSGPPPEDDSSDTSLKLGLPY 225
+ + + A+ EEG SSES+ N + S+G P + +SSDTSL+LGLPY
Sbjct: 181 LGMQICNNVHAHGGAESENAAVYEEGQSSESITNAGN-STGAPVDSESSDTSLRLGLPY 238
>sp|Q9FUY6|JOIN_SOLLC MADS-box protein JOINTLESS OS=Solanum lycopersicum GN=J PE=1 SV=1
Length = 265
Score = 267 bits (682), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 146/238 (61%), Positives = 180/238 (75%), Gaps = 15/238 (6%)
Query: 1 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSS 60
MAREKI+I+KIDN TARQVTFSKRRRGLFKKAEELSVLCDA+V +IIFS+TGKLF+ SSS
Sbjct: 1 MAREKIQIKKIDNSTARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFDYSSS 60
Query: 61 SMKDIIARYNMHSSNISKLNHPSLELQL-ENSKYLSLSREIADKSRQLRQMRGEDLHGLT 119
SMK I+ R ++HS N+ KL+ PSLELQL ENS Y LS+EI++KS +LRQMRGE+L GL
Sbjct: 61 SMKQILERRDLHSKNLEKLDQPSLELQLVENSNYSRLSKEISEKSHRLRQMRGEELQGLN 120
Query: 120 IEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLKQKV-------AS 172
IEELQ LE LE GLSRV++ KGD+IM EI+ L++KG L+EEN+ L+Q+V +
Sbjct: 121 IEELQQLERSLETGLSRVIERKGDKIMREINQLQQKGMHLMEENEKLRQQVMEISNNNNN 180
Query: 173 SCKGKR---VVLVDSDIAI----QEEGMSSESVNNVCSCSSGPPPEDDSSDTSLKLGL 223
+ G R VV+ + + E+G SSESV N C+ PP +DDSSDTSLKLGL
Sbjct: 181 NNNGYREAGVVIFEPENGFNNNNNEDGQSSESVTNPCNSIDPPPQDDDSSDTSLKLGL 238
>sp|O82794|AGL24_ARATH MADS-box protein AGL24 OS=Arabidopsis thaliana GN=AGL24 PE=1 SV=1
Length = 220
Score = 254 bits (649), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 135/226 (59%), Positives = 176/226 (77%), Gaps = 11/226 (4%)
Query: 1 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSS 60
MAREKI+I+KIDNITARQVTFSKRRRG+FKKA+ELSVLCDA+V +IIFSATGKLFE SSS
Sbjct: 1 MAREKIRIKKIDNITARQVTFSKRRRGIFKKADELSVLCDADVALIIFSATGKLFEFSSS 60
Query: 61 SMKDIIARYNMHSSNISKL-NHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLT 119
M+DI+ RY++H+SNI+KL + PS L+LEN LS+E+ DK++QLR++RGEDL GL
Sbjct: 61 RMRDILGRYSLHASNINKLMDPPSTHLRLENCNLSRLSKEVEDKTKQLRKLRGEDLDGLN 120
Query: 120 IEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLKQKVASSCKGKRV 179
+EELQ LE +LE GLSRV + KG+ +M++I +LE++G++L++ENK L+ K+ + + K
Sbjct: 121 LEELQRLEKLLESGLSRVSEKKGECVMSQIFSLEKRGSELVDENKRLRDKLETLERAKLT 180
Query: 180 VLVDSDIAIQEEGMSSESV-NNVCSCSSGPPPEDDSSDTSLKLGLP 224
L +E + +ESV NV S SG P EDD SDTSLKLGLP
Sbjct: 181 TL--------KEALETESVTTNVSSYDSGTPLEDD-SDTSLKLGLP 217
>sp|Q9XJ66|MAD22_ORYSJ MADS-box transcription factor 22 OS=Oryza sativa subsp. japonica
GN=MADS22 PE=2 SV=1
Length = 228
Score = 226 bits (577), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 124/225 (55%), Positives = 164/225 (72%), Gaps = 3/225 (1%)
Query: 1 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSS 60
MARE+ +I++I++ ARQVTFSKRRRGLFKKAEELSVLCDA+V +I+FS+TGKL +SS
Sbjct: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASS 60
Query: 61 SMKDIIARYNMHSSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTI 120
SM +II +YN HS+N+ K PSL+L LE+SKY L+ ++A+ S +LRQMRGE+L GL+I
Sbjct: 61 SMNEIIDKYNTHSNNLGKAEQPSLDLNLEHSKYAHLNEQLAEASLRLRQMRGEELEGLSI 120
Query: 121 EELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLKQKVASSCKGKRVV 180
+ELQ LE LE GL RV+ TK + M +IS L+RK ++L EEN L+ +V+ ++ V
Sbjct: 121 DELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQLAEENMQLRNQVSQISPAEKQV 180
Query: 181 LVDSDIAIQEEGMSSESV-NNVCSCSSGPPPEDDSSDTSLKLGLP 224
VD++ + EG SSESV + S SS DD SD SLKLGLP
Sbjct: 181 -VDTENFVT-EGQSSESVMTALHSGSSQSQDNDDGSDVSLKLGLP 223
>sp|Q5K4R0|MAD47_ORYSJ MADS-box transcription factor 47 OS=Oryza sativa subsp. japonica
GN=MADS47 PE=1 SV=2
Length = 246
Score = 223 bits (569), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 126/225 (56%), Positives = 161/225 (71%), Gaps = 6/225 (2%)
Query: 3 REKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSSSM 62
RE+I IR+IDN+ ARQVTFSKRRRGLFKKAEELS+LCDAEVG+++FSATGKLF+ +S+SM
Sbjct: 22 RERIAIRRIDNLAARQVTFSKRRRGLFKKAEELSILCDAEVGLVVFSATGKLFQFASTSM 81
Query: 63 KDIIARYNMHSSNISKLNHPSLELQLENSKYLS-LSREIADKSRQLRQMRGEDLHGLTIE 121
+ II RYN HS + + L+LQ E+S + L E+A+ S +LRQMRGE+LH L +E
Sbjct: 82 EQIIDRYNSHSKTLQRAEPSQLDLQGEDSSTCARLKEELAETSLRLRQMRGEELHRLNVE 141
Query: 122 ELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLKQKVASSCKGKRVVL 181
+LQ LE LE GL VL+TK +I++EI LERK +L+EEN LK+++ S + +
Sbjct: 142 QLQELEKSLESGLGSVLKTKSKKILDEIDGLERKRMQLIEENLRLKEQLQVSRMSRMEEM 201
Query: 182 ---VDSDIAIQEEGMSSESVNNVCSCSSGPPPEDDSSDTSLKLGL 223
DS+I + EEG SSESV N S PP D SSDTSLKLGL
Sbjct: 202 QPGPDSEI-VYEEGQSSESVTN-ASYPRPPPDNDYSSDTSLKLGL 244
>sp|Q69TG5|MAD55_ORYSJ MADS-box transcription factor 55 OS=Oryza sativa subsp. japonica
GN=MADS55 PE=2 SV=2
Length = 245
Score = 192 bits (489), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 114/234 (48%), Positives = 152/234 (64%), Gaps = 27/234 (11%)
Query: 15 TARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSSSMKDIIARYNMHSS 74
ARQVTFSKRRRGLFKKAEEL+VLCDA+V +++FS+TGKL + +SS+M +II +Y HS
Sbjct: 15 AARQVTFSKRRRGLFKKAEELAVLCDADVALVVFSSTGKLSQFASSNMNEIIDKYTTHSK 74
Query: 75 NISKLN-HPSLE----------------------LQLENSKYLSLSREIADKSRQLRQMR 111
N+ K + PS++ LQLE+SK SL+ ++A+ S QLRQMR
Sbjct: 75 NLGKTDKQPSIDLNFFLIILLRTYTNSYAYIHLLLQLEHSKCSSLNEQLAEASLQLRQMR 134
Query: 112 GEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLKQKVA 171
GE+L GL++EELQ +E LE GL RVL TK + M EIS L+RKG +L EEN L+ ++
Sbjct: 135 GEELEGLSVEELQQMEKNLEAGLQRVLCTKDQQFMQEISELQRKGIQLAEENMRLRDQMP 194
Query: 172 SSCKGKRVVLVDSDIAIQEEGMSSESVNNVCSCSSGPPPE-DDSSDTSLKLGLP 224
V D++ + E+G SSESV + + +SG + DD SD SLKLGLP
Sbjct: 195 QVPTAGLAV-PDTENVLTEDGQSSESV--MTALNSGSSQDNDDGSDISLKLGLP 245
>sp|Q6EP49|MAD27_ORYSJ MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica
GN=MADS27 PE=2 SV=2
Length = 240
Score = 153 bits (387), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 119/172 (69%), Gaps = 2/172 (1%)
Query: 1 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSS 60
M R KI IR+IDN T+RQVTFSKRR G+FKKA+EL++LCDAEVG++IFS+TG+L+E SS+
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGIFKKAKELAILCDAEVGLMIFSSTGRLYEYSST 60
Query: 61 SMKDIIARYNMHSSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTI 120
SMK +I RY + +P+ EL+ + SL +++ + RQ+ GEDL GL +
Sbjct: 61 SMKSVIDRYGKSKDEQQAVANPNSELKFWQREAASLRQQLHNLQENHRQLMGEDLSGLNV 120
Query: 121 EELQHLETMLEQGLSRVLQTKGDRIM-NEISTLERKGAKLLEENKNLKQKVA 171
+ELQ LE LE L R ++TK D ++ +EI L RKG+ + +EN L +K++
Sbjct: 121 KELQSLENQLEISL-RSVRTKKDHVLIDEIHELNRKGSLVHQENMELYKKIS 171
>sp|A2RVQ5|AGL16_ARATH Agamous-like MADS-box protein AGL16 OS=Arabidopsis thaliana
GN=AGL16 PE=1 SV=1
Length = 240
Score = 152 bits (383), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/170 (48%), Positives = 113/170 (66%)
Query: 1 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSS 60
M R KI I++I+N T+RQVTFSKRR GL KKA+EL++LCDAEVGVIIFS+TG+L++ SSS
Sbjct: 1 MGRGKIAIKRINNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVIIFSSTGRLYDFSSS 60
Query: 61 SMKDIIARYNMHSSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTI 120
SMK +I RY+ S N P+ E+Q + L R++ + RQM GE+L GL++
Sbjct: 61 SMKSVIERYSDAKGETSSENDPASEIQFWQKEAAILKRQLHNLQENHRQMMGEELSGLSV 120
Query: 121 EELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLKQKV 170
E LQ+LE LE L V K ++ EI L R+G + +EN +L +KV
Sbjct: 121 EALQNLENQLELSLRGVRMKKDQMLIEEIQVLNREGNLVHQENLDLHKKV 170
>sp|Q6VAM4|MAD23_ORYSJ MADS-box transcription factor 23 OS=Oryza sativa subsp. japonica
GN=MADS23 PE=2 SV=1
Length = 159
Score = 137 bits (346), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 106/155 (68%)
Query: 1 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSS 60
M R KI+I++IDN T+RQVTFSKRR GLFKKA ELS+LCDAEVG+++FS+T +L++ +SS
Sbjct: 1 MGRGKIEIKRIDNATSRQVTFSKRRSGLFKKARELSILCDAEVGLLVFSSTSRLYDFASS 60
Query: 61 SMKDIIARYNMHSSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTI 120
SMK II RYN + + + S E +L + SL +++ + RQ+ G+ L GL +
Sbjct: 61 SMKSIIERYNETKEDPHQTMNASSEAKLWQQEAASLRQQLHNLQEYHRQLLGQQLSGLDV 120
Query: 121 EELQHLETMLEQGLSRVLQTKGDRIMNEISTLERK 155
E+LQ+LE+ LE L + K + +M++I L RK
Sbjct: 121 EDLQNLESKLEMSLKNIRLRKDNVMMDQIQELSRK 155
>sp|Q9SZJ6|AGL21_ARATH Agamous-like MADS-box protein AGL21 OS=Arabidopsis thaliana
GN=AGL21 PE=1 SV=1
Length = 228
Score = 135 bits (341), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 110/170 (64%)
Query: 1 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSS 60
M R KI I++ID+ T+RQVTFSKRR+GL KKA+EL++LCDAEVG+IIFS+TGKL++ +SS
Sbjct: 1 MGRGKIVIQRIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLIIFSSTGKLYDFASS 60
Query: 61 SMKDIIARYNMHSSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTI 120
SMK +I RYN +L +P+ E++ + L +E+ RQM GE L+GL++
Sbjct: 61 SMKSVIDRYNKSKIEQQQLLNPASEVKFWQREAAVLRQELHALQENHRQMMGEQLNGLSV 120
Query: 121 EELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLKQKV 170
EL LE +E L + K + EI L +K + +EN +L +KV
Sbjct: 121 NELNSLENQIEISLRGIRMRKEQLLTQEIQELSQKRNLIHQENLDLSRKV 170
>sp|Q9SI38|ANR1_ARATH MADS-box transcription factor ANR1 OS=Arabidopsis thaliana GN=ANR1
PE=1 SV=1
Length = 234
Score = 131 bits (329), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/172 (48%), Positives = 110/172 (63%), Gaps = 3/172 (1%)
Query: 1 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSS 59
M R KI IR+IDN T+RQVTFSKRR GL KKA+ELS+LCDAEVGVIIFS+TGKL++ +S+
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELSILCDAEVGVIIFSSTGKLYDYASN 60
Query: 60 SSMKDIIARYN-MHSSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGL 118
SSMK II RYN + LNH S E++ + SL +++ R++ GE+L G+
Sbjct: 61 SSMKTIIERYNRVKEEQHQLLNHAS-EIKFWQREVASLQQQLQYLQECHRKLVGEELSGM 119
Query: 119 TIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLKQKV 170
+LQ+LE L L V K + NEI L RKG + +EN L+ V
Sbjct: 120 NANDLQNLEDQLVTSLKGVRLKKDQLMTNEIRELNRKGQIIQKENHELQNIV 171
>sp|Q6EU39|MADS6_ORYSJ MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica
GN=MADS6 PE=1 SV=1
Length = 250
Score = 130 bits (328), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 85/229 (37%), Positives = 122/229 (53%), Gaps = 12/229 (5%)
Query: 1 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSS 60
M R ++++++I+N RQVTFSKRR GL KKA ELSVLCDAEV +IIFS+ GKL+E S+
Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60
Query: 61 SMKDIIARYNMHSSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTI 120
+ + RY N N+ E Q + L + R R + GEDL L++
Sbjct: 61 GITKTLERYQHCCYNAQDSNNALSETQSWYHEMSKLKAKFEALQRTQRHLLGEDLGPLSV 120
Query: 121 EELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLKQK--VASSCKGKR 178
+ELQ LE LE LS+ Q K +M ++ L RK +L E N+ LK K V S R
Sbjct: 121 KELQQLEKQLECALSQARQRKTQLMMEQVEELRRKERQLGEINRQLKHKLEVEGSTSNYR 180
Query: 179 VVLVDSDIAIQEEGMSSESVNNVCSCSSGPPPEDDSSDT--SLKLGLPY 225
A+Q+ + +V + PPP + D+ +L++G P+
Sbjct: 181 --------AMQQASWAQGAVVENGAAYVQPPPHSAAMDSEPTLQIGYPH 221
>sp|Q7XUN2|MAD17_ORYSJ MADS-box transcription factor 17 OS=Oryza sativa subsp. japonica
GN=MADS17 PE=1 SV=2
Length = 249
Score = 130 bits (328), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 90/230 (39%), Positives = 127/230 (55%), Gaps = 20/230 (8%)
Query: 1 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSS 60
M R ++++++I+N RQVTFSKRR GL KKA ELSVLCDAEV +IIFS+ GKL+E S+
Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60
Query: 61 SMKDIIARYNMHSSNISKLNHPSLELQLENSKYLSLSR---EIADKSRQLRQMRGEDLHG 117
+ + +YN N N +L S Y +SR ++ R R M GEDL
Sbjct: 61 GINKTLEKYNSCCYNAQGSNS-ALAGGEHQSWYQEMSRLKTKLECLQRSQRHMLGEDLGP 119
Query: 118 LTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLKQKV-----AS 172
L+I+ELQ LE LE LS+ Q K +M ++ L RK +L E NK LK K+ +S
Sbjct: 120 LSIKELQQLEKQLEYSLSQARQRKTQIMMEQVDDLRRKERQLGELNKQLKNKLEAEADSS 179
Query: 173 SCKGKRVVLVDSDIAIQEEGMSSESVNNVCSCSSGPPPEDDSSDTSLKLG 222
+C+ AIQ+ + V+ ++ PPP+ D T L++G
Sbjct: 180 NCRS----------AIQDSWVHGTVVSGGRVLNAQPPPDIDCEPT-LQIG 218
>sp|Q6Z6W2|MAD57_ORYSJ MADS-box transcription factor 57 OS=Oryza sativa subsp. japonica
GN=MADS57 PE=2 SV=2
Length = 241
Score = 130 bits (327), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 73/163 (44%), Positives = 107/163 (65%), Gaps = 1/163 (0%)
Query: 1 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSS 60
M R KI IR+IDN T+RQVTFSKRR GL KKA+ELS+LCDAEVG+++FS+TG+L+E SS+
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLVVFSSTGRLYEFSST 60
Query: 61 SMKDIIARYNMHSSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTI 120
+MK +I RY + N S E+++ + SL +++ + +Q+ GE+L GL +
Sbjct: 61 NMKTVIDRYTNAKEELLGGNATS-EIKIWQREAASLRQQLHNLQESHKQLMGEELSGLGV 119
Query: 121 EELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEEN 163
+LQ LE LE L + K + + +EI L KG+ + +EN
Sbjct: 120 RDLQGLENRLEISLRNIRMRKDNLLKSEIEELHVKGSLIHQEN 162
>sp|Q9XGJ4|GGM13_GNEGN MADS-box protein GGM13 OS=Gnetum gnemon GN=GGM13 PE=2 SV=1
Length = 237
Score = 129 bits (324), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/221 (39%), Positives = 126/221 (57%), Gaps = 24/221 (10%)
Query: 1 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE--SS 58
M R KI+I++I+N T RQVTFSKRR GL KKA ELSVLCDAE+G+IIFS++GKLFE S+
Sbjct: 1 MGRGKIEIKRIENTTNRQVTFSKRRGGLLKKAHELSVLCDAELGLIIFSSSGKLFEYSSA 60
Query: 59 SSSMKDIIARYN-MHSSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHG 117
SSSMK II RY + + I++ ++ L ++ K E +R+M GEDL
Sbjct: 61 SSSMKKIIERYQKVSGARITEYDNQHLYCEMTRMK-----NENEKLQTNIRRMMGEDLTS 115
Query: 118 LTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLKQKVASSCKGK 177
LT+ EL HL LE SRV K ++ ++ L RK L ++N +L C+
Sbjct: 116 LTMTELHHLGQQLESASSRVRSRKNQLMLQQLENLRRKERILEDQNSHL-------CR-- 166
Query: 178 RVVLVDSDIAIQEEGMSSESVNNVCSCSSGPPPEDDSSDTS 218
+L + A+ EG+ + C PPP++ ++ +
Sbjct: 167 --LLAEQQAAV--EGVQEPLLEFGVFC---PPPDNKTAAAA 200
>sp|Q38840|AGL17_ARATH Agamous-like MADS-box protein AGL17 OS=Arabidopsis thaliana
GN=AGL17 PE=2 SV=2
Length = 227
Score = 129 bits (323), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/171 (45%), Positives = 115/171 (67%), Gaps = 2/171 (1%)
Query: 1 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSS 60
M R KI I+KID+ T+RQVTFSKRR+GL KKA+EL++LCDAEV +IIFS T KL++ +SS
Sbjct: 1 MGRGKIVIQKIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVCLIIFSNTDKLYDFASS 60
Query: 61 SMKDIIARYNMHSSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTI 120
S+K I R+N +L +P+ E++ + +L +E+ RQ+ G +L+GL++
Sbjct: 61 SVKSTIERFNTAKMEEQELMNPASEVKFWQREAETLRQELHSLQENYRQLTGVELNGLSV 120
Query: 121 EELQHLETMLEQGLSRVLQTKGDRIM-NEISTLERKGAKLLEENKNLKQKV 170
+ELQ++E+ LE L R ++ K ++I+ NEI L RK + EN L +KV
Sbjct: 121 KELQNIESQLEMSL-RGIRMKREQILTNEIKELTRKRNLVHHENLELSRKV 170
>sp|Q40872|AG_PANGI Floral homeotic protein AGAMOUS OS=Panax ginseng GN=AG2 PE=2 SV=1
Length = 242
Score = 129 bits (323), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/175 (43%), Positives = 110/175 (62%), Gaps = 7/175 (4%)
Query: 1 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSS 60
+ R KI+I++I+N T RQVTF KRR GL KKA ELSVLCDAEV +I+FS G+L+E +++
Sbjct: 17 LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 76
Query: 61 SMKDIIARYN---MHSSNISKLNHPSLEL-QLENSKYLSLSREIADKSRQLRQMRGEDLH 116
S+K I RY S N S ++ + + Q E SK L +EI+ + R M GE L
Sbjct: 77 SVKGTIERYKKACTDSPNTSSVSEANAQFYQQEASK---LRQEISSIQKNNRNMMGESLG 133
Query: 117 GLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLKQKVA 171
LT+ +L+ LET LE+G+SR+ K + + EI +++K L N+ L+ K+A
Sbjct: 134 SLTVRDLKGLETKLEKGISRIRSKKNELLFAEIEYMQKKEIDLHNNNQYLRAKIA 188
>sp|Q84NC5|MAD25_ORYSJ MADS-box transcription factor 25 OS=Oryza sativa subsp. japonica
GN=MADS25 PE=2 SV=2
Length = 227
Score = 128 bits (322), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 103/170 (60%)
Query: 1 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSS 60
M R KI I++IDN RQVTFSKRR GL KKA EL++LCDA+VG+I+FS TG+L++ SSS
Sbjct: 1 MGRGKIAIKRIDNTMNRQVTFSKRRGGLMKKARELAILCDADVGLIVFSCTGRLYDFSSS 60
Query: 61 SMKDIIARYNMHSSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTI 120
SMK II RY +L +P E + + +L +++ + RQ+ GE++ T+
Sbjct: 61 SMKSIIERYQEAGEEHCRLLNPMSEAKFWQREVTTLRQQVQNLHHNNRQLLGEEISNFTV 120
Query: 121 EELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLKQKV 170
+LQ L+ +E L + K + EI L KG+ + +EN L++K
Sbjct: 121 RDLQLLQNQVEMSLHSIRNKKDQLLAEEILKLNEKGSLVQKENSELRKKF 170
>sp|Q39685|CMB1_DIACA MADS-box protein CMB1 OS=Dianthus caryophyllus GN=CMB1 PE=2 SV=1
Length = 233
Score = 125 bits (313), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 108/179 (60%), Gaps = 1/179 (0%)
Query: 1 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSS 59
M R ++++++I+N RQVTF+KRR GL KKA ELSVLCDAEV +I+FS GKL+E S+
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCST 60
Query: 60 SSMKDIIARYNMHSSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLT 119
S M + RY S + + PS E + +YL L ++ R R + GEDL L+
Sbjct: 61 SCMNKTLERYQRCSYGSLETSQPSKETESSYQEYLKLKAKVDVLQRSHRNLLGEDLGELS 120
Query: 120 IEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLKQKVASSCKGKR 178
+EL+ LE L++ L ++ K ++++++ L++K L E N+ LK K+ SC R
Sbjct: 121 TKELEQLEHQLDKSLRQIRSIKTQHMLDQLADLQKKEEMLFESNRALKTKLEESCASFR 179
>sp|P29381|AGL1_ARATH Agamous-like MADS-box protein AGL1 OS=Arabidopsis thaliana GN=AGL1
PE=1 SV=1
Length = 248
Score = 125 bits (313), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/181 (41%), Positives = 110/181 (60%), Gaps = 11/181 (6%)
Query: 1 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSS 60
+ R KI+I++I+N T RQVTF KRR GL KKA ELSVLCDAEV ++IFS G+L+E +++
Sbjct: 16 LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYANN 75
Query: 61 SMKDIIARYNMHSSNISKLNHPSLE------LQLENSKYLSLSREIADKSRQLRQMRGED 114
S++ I RY S+ +N PS+ Q E SK L R+I D R + GE
Sbjct: 76 SVRGTIERYKKACSDA--VNPPSVTEANTQYYQQEASK---LRRQIRDIQNSNRHIVGES 130
Query: 115 LHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLKQKVASSC 174
L L +EL++LE LE+G+SRV K + ++ EI ++++ +L N L+ K+A
Sbjct: 131 LGSLNFKELKNLEGRLEKGISRVRSKKNELLVAEIEYMQKREMELQHNNMYLRAKIAEGA 190
Query: 175 K 175
+
Sbjct: 191 R 191
>sp|P29383|AGL3_ARATH Agamous-like MADS-box protein AGL3 OS=Arabidopsis thaliana GN=AGL3
PE=2 SV=2
Length = 258
Score = 124 bits (311), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/221 (35%), Positives = 118/221 (53%), Gaps = 23/221 (10%)
Query: 1 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE--SS 58
M R K+++++I+N RQVTF+KRR GL KKA ELSVLCDAE+ ++IFS GKL+E SS
Sbjct: 1 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEIALLIFSNRGKLYEFCSS 60
Query: 59 SSSMKDIIARYNMHSSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGL 118
S M + +Y HS N + +LQ + YL L + R + GE+L +
Sbjct: 61 PSGMARTVDKYRKHSYATMDPNQSAKDLQDKYQDYLKLKSRVEILQHSQRHLLGEELSEM 120
Query: 119 TIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLKQKVASSCKGKR 178
+ EL+HLE ++ L ++ TK +++++S L+ K LLE N++L++K
Sbjct: 121 DVNELEHLERQVDASLRQIRSTKARSMLDQLSDLKTKEEMLLETNRDLRRK--------- 171
Query: 179 VVLVDSDIAIQEEGMSSESVN----------NVCSCSSGPP 209
L DSD A+ + S + + S S PP
Sbjct: 172 --LEDSDAALTQSFWGSSAAEQQQQHQQQQQGMSSYQSNPP 210
>sp|Q38847|AGL15_ARATH Agamous-like MADS-box protein AGL15 OS=Arabidopsis thaliana
GN=AGL15 PE=1 SV=1
Length = 268
Score = 124 bits (311), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 91/229 (39%), Positives = 131/229 (57%), Gaps = 18/229 (7%)
Query: 1 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSS 60
M R KI+I++I+N +RQVTFSKRR GL KKA ELSVLCDAEV VI+FS +GKLFE SS+
Sbjct: 1 MGRGKIEIKRIENANSRQVTFSKRRSGLLKKARELSVLCDAEVAVIVFSKSGKLFEYSST 60
Query: 61 SMKDIIARYNMH-SSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLT 119
MK ++RY H SS+ SK E+ + L +++ + Q++G+ L+ LT
Sbjct: 61 GMKQTLSRYGNHQSSSASKAEEDCAEVDI-------LKDQLSKLQEKHLQLQGKGLNPLT 113
Query: 120 IEELQHLETMLEQGLSRVLQTKGDRIMNEI--STLERKGAKLLEENKNLKQKVAS--SCK 175
+ELQ LE L L V + K + N++ S L+ + A+L EN+ L+++V S
Sbjct: 114 FKELQSLEQQLYHALITVRERKERLLTNQLEESRLKEQRAEL--ENETLRRQVQELRSFL 171
Query: 176 GKRVVLVDSDIAIQEEGMSSESVNNVCSCSSGPPPEDDSSDTSLKLGLP 224
V S I + +N+ CS ++ SDT+L+LGLP
Sbjct: 172 PSFTHYVPSYIKCFAIDPKNALINHDSKCSL----QNTDSDTTLQLGLP 216
>sp|Q0D4T4|MAD18_ORYSJ MADS-box transcription factor 18 OS=Oryza sativa subsp. japonica
GN=MADS18 PE=1 SV=1
Length = 249
Score = 124 bits (311), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 83/213 (38%), Positives = 119/213 (55%), Gaps = 14/213 (6%)
Query: 1 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSS 59
M R +++R+I+N RQVTFSKRR GL KKA E+SVLCDA+V +I+FS GKL+E SS
Sbjct: 1 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSH 60
Query: 60 SSMKDIIARYNMHSSNISKLNHPSLELQLEN--SKYLSLSREIADKSRQLRQMRGEDLHG 117
SSM+ I+ RY +S + + P+ E Q EN +Y L ++ + RQ+ GE L
Sbjct: 61 SSMEGILERYQRYSFDERAVLEPNTEDQ-ENWGDEYGILKSKLDALQKSQRQLLGEQLDT 119
Query: 118 LTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLKQKVASSCKGK 177
LTI+ELQ LE LE L + K + IS L++K L +N N+ QK+ + K K
Sbjct: 120 LTIKELQQLEHQLEYSLKHIRSKKNQLLFESISELQKKEKSLKNQN-NVLQKLMETEKEK 178
Query: 178 RVVLVDSDIAIQEEGMSSESVNNVCSCSSGPPP 210
+++++ E N +S P P
Sbjct: 179 NNAIINTN---------REEQNGATPSTSSPTP 202
>sp|A2YNI2|MAD18_ORYSI MADS-box transcription factor 18 OS=Oryza sativa subsp. indica
GN=MADS18 PE=2 SV=2
Length = 249
Score = 124 bits (311), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 83/213 (38%), Positives = 119/213 (55%), Gaps = 14/213 (6%)
Query: 1 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSS 59
M R +++R+I+N RQVTFSKRR GL KKA E+SVLCDA+V +I+FS GKL+E SS
Sbjct: 1 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSH 60
Query: 60 SSMKDIIARYNMHSSNISKLNHPSLELQLEN--SKYLSLSREIADKSRQLRQMRGEDLHG 117
SSM+ I+ RY +S + + P+ E Q EN +Y L ++ + RQ+ GE L
Sbjct: 61 SSMEGILERYQRYSFDERAVLEPNTEDQ-ENWGDEYGILKSKLDALQKSQRQLLGEQLDT 119
Query: 118 LTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLKQKVASSCKGK 177
LTI+ELQ LE LE L + K + IS L++K L +N N+ QK+ + K K
Sbjct: 120 LTIKELQQLEHQLEYSLKHIRSKKNQLLFESISELQKKEKSLKNQN-NVLQKLMETEKEK 178
Query: 178 RVVLVDSDIAIQEEGMSSESVNNVCSCSSGPPP 210
+++++ E N +S P P
Sbjct: 179 NNAIINTN---------REEQNGATPSTSSPTP 202
>sp|Q0DEB8|MADS5_ORYSJ MADS-box transcription factor 5 OS=Oryza sativa subsp. japonica
GN=MADS5 PE=1 SV=1
Length = 225
Score = 122 bits (307), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 111/173 (64%), Gaps = 3/173 (1%)
Query: 1 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSS 59
M R K+++++I+N +RQVTF+KRR GL KKA ELSVLCDAEV +IIFS G+LFE S+S
Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFSTS 60
Query: 60 SSMKDIIARYNMHSSNISKLN-HPSLELQLENSK-YLSLSREIADKSRQLRQMRGEDLHG 117
S M + RY + N++ +LE +L N + YL L + R + GEDL
Sbjct: 61 SCMYKTLERYRSCNYNLNSCEASAALETELSNYQEYLKLKTRVEFLQTTQRNLLGEDLVP 120
Query: 118 LTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLKQKV 170
L+++EL+ LE +E L + +K ++++++ L+RK +L + NK+LK+K+
Sbjct: 121 LSLKELEQLENQIEISLMNIRSSKNQQLLDQVFELKRKEQQLQDANKDLKRKI 173
>sp|A2Y9P0|MADS5_ORYSI MADS-box transcription factor 5 OS=Oryza sativa subsp. indica
GN=MADS5 PE=2 SV=1
Length = 225
Score = 122 bits (307), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 111/173 (64%), Gaps = 3/173 (1%)
Query: 1 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSS 59
M R K+++++I+N +RQVTF+KRR GL KKA ELSVLCDAEV +IIFS G+LFE S+S
Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFSTS 60
Query: 60 SSMKDIIARYNMHSSNISKLN-HPSLELQLENSK-YLSLSREIADKSRQLRQMRGEDLHG 117
S M + RY + N++ +LE +L N + YL L + R + GEDL
Sbjct: 61 SCMYKTLERYRSCNYNLNSCEASAALETELSNYQEYLKLKTRVEFLQTTQRNLLGEDLVP 120
Query: 118 LTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLKQKV 170
L+++EL+ LE +E L + +K ++++++ L+RK +L + NK+LK+K+
Sbjct: 121 LSLKELEQLENQIEISLMNIRSSKNQQLLDQVFELKRKEQQLQDANKDLKRKI 173
>sp|Q40168|AG_SOLLC Floral homeotic protein AGAMOUS OS=Solanum lycopersicum GN=AG1 PE=2
SV=1
Length = 248
Score = 122 bits (305), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 111/177 (62%), Gaps = 7/177 (3%)
Query: 1 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSS 60
+ R KI+I++I+N T RQVTF KRR GL KKA ELSVLCDAEV +++FS G+L+E +++
Sbjct: 17 LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSNRGRLYEYANN 76
Query: 61 SMKDIIARYNM---HSSNISKLNHPSLE-LQLENSKYLSLSREIADKSRQLRQMRGEDLH 116
S+K I RY SSN ++ + + Q E SK L +I + Q R M GE L
Sbjct: 77 SVKATIERYKKACSDSSNTGSVSEANAQYYQQEASK---LRAQIGNLMNQNRNMMGEALA 133
Query: 117 GLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLKQKVASS 173
G+ ++EL++LE +E+G+S++ K + + EI ++++ L N+ L+ K+A +
Sbjct: 134 GMKLKELKNLEQRIEKGISKIRSKKNELLFAEIEYMQKREVDLHNNNQYLRAKIAET 190
>sp|P29385|AGL5_ARATH Agamous-like MADS-box protein AGL5 OS=Arabidopsis thaliana GN=AGL5
PE=1 SV=1
Length = 246
Score = 122 bits (305), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 110/177 (62%), Gaps = 11/177 (6%)
Query: 1 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSS 60
+ R KI+I++I+N T RQVTF KRR GL KKA ELSVLCDAEV ++IFS G+L+E +++
Sbjct: 16 IGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYANN 75
Query: 61 SMKDIIARYNMHSSNISKLNHPSLE------LQLENSKYLSLSREIADKSRQLRQMRGED 114
S++ I RY S+ +N P++ Q E SK L R+I D R + GE
Sbjct: 76 SVRGTIERYKKACSD--AVNPPTITEANTQYYQQEASK---LRRQIRDIQNLNRHILGES 130
Query: 115 LHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLKQKVA 171
L L +EL++LE+ LE+G+SRV K + ++ EI ++++ +L +N L+ K+
Sbjct: 131 LGSLNFKELKNLESRLEKGISRVRSKKHEMLVAEIEYMQKREIELQNDNMYLRSKIT 187
>sp|Q43585|AG_TOBAC Floral homeotic protein AGAMOUS OS=Nicotiana tabacum GN=AG1 PE=2
SV=1
Length = 248
Score = 122 bits (305), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 111/177 (62%), Gaps = 7/177 (3%)
Query: 1 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSS 60
+ R KI+I++I+N T RQVTF KRR GL KKA ELSVLCDAEV +I+FS+ G+L+E +++
Sbjct: 17 LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 76
Query: 61 SMKDIIARYNM---HSSNISKLNHPSLE-LQLENSKYLSLSREIADKSRQLRQMRGEDLH 116
S+K I RY SSN ++ + + Q E SK L +I + Q R M GE L
Sbjct: 77 SVKATIERYKKACSDSSNTGSISEANAQYYQQEASK---LRAQIGNLQNQNRNMLGESLA 133
Query: 117 GLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLKQKVASS 173
L++ +L++LE +E+G+S++ K + + EI ++++ L N+ L+ K+A +
Sbjct: 134 ALSLRDLKNLEQKIEKGISKIRSKKNELLFAEIEYMQKREIDLHNNNQYLRAKIAET 190
>sp|P29382|SEP1_ARATH Developmental protein SEPALLATA 1 OS=Arabidopsis thaliana GN=SEP1
PE=1 SV=2
Length = 251
Score = 120 bits (302), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 75/172 (43%), Positives = 105/172 (61%), Gaps = 2/172 (1%)
Query: 1 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSS 59
M R ++++++I+N RQVTF+KRR GL KKA ELSVLCDAEV +IIFS GKL+E SS
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
Query: 60 SSMKDIIARYNMHS-SNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGL 118
S+M + RY S +I N P+ EL+ +YL L + RQ R + GEDL L
Sbjct: 61 SNMLKTLDRYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPL 120
Query: 119 TIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLKQKV 170
+EL+ LE L+ L +V K +++++S L+ K LLE N+ L K+
Sbjct: 121 NSKELEQLERQLDGSLKQVRSIKTQYMLDQLSDLQNKEQMLLETNRALAMKL 172
>sp|Q2V0P1|MAD58_ORYSJ MADS-box transcription factor 58 OS=Oryza sativa subsp. japonica
GN=MADS58 PE=2 SV=1
Length = 272
Score = 120 bits (301), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 112/182 (61%), Gaps = 5/182 (2%)
Query: 2 AREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSSS 61
+R KI+I++I+N T RQVTF KRR GL KKA ELSVLCDAEV +++FS+ G+L+E S++S
Sbjct: 44 SRGKIEIKRIENTTNRQVTFCKRRSGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNS 103
Query: 62 MKDIIARY---NMHSSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGL 118
+K+ I RY N +SN S + + Q + L ++I + R + G+++ +
Sbjct: 104 VKETIERYKKANSDTSNASTV--AEINAQHYQQEAAKLKQQITNLQNSNRTLVGDNITTM 161
Query: 119 TIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLKQKVASSCKGKR 178
EL+ LE L++GL ++ K + + EI ++R+ +L +N LK KVA S +G +
Sbjct: 162 NHRELKQLEGRLDKGLGKIRARKNELLCAEIEYMQRRETELQNDNMYLKSKVAESERGLQ 221
Query: 179 VV 180
V
Sbjct: 222 TV 223
>sp|Q8RYD9|TT16_ARATH Protein TRANSPARENT TESTA 16 OS=Arabidopsis thaliana GN=TT16 PE=1
SV=1
Length = 252
Score = 120 bits (300), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/168 (43%), Positives = 101/168 (60%), Gaps = 4/168 (2%)
Query: 1 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKL--FESS 58
M R KI+I+KI+N TARQVTFSKRR GL KK ELS+LCDA +G+I+FSATGKL F S
Sbjct: 1 MGRGKIEIKKIENQTARQVTFSKRRTGLIKKTRELSILCDAHIGLIVFSATGKLSEFCSE 60
Query: 59 SSSMKDIIARYNMHSSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGL 118
+ M +I RY +H++ + +H + QL + L L RE + +LR G DL +
Sbjct: 61 QNRMPQLIDRY-LHTNGLRLPDHHDDQEQLHHEMEL-LRRETCNLELRLRPFHGHDLASI 118
Query: 119 TIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNL 166
EL LE LE + +V + K + + ++ L RK L E+N N+
Sbjct: 119 PPNELDGLERQLEHSVLKVRERKNELMQQQLENLSRKRRMLEEDNNNM 166
>sp|Q40885|AG_PETHY Floral homeotic protein AGAMOUS OS=Petunia hybrida GN=AG1 PE=1 SV=1
Length = 242
Score = 119 bits (299), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 114/186 (61%), Gaps = 7/186 (3%)
Query: 1 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSS 60
+ R KI+I++I+N T RQVTF KRR GL KKA ELSVLCDAEV +I+FS+ G+L+E +++
Sbjct: 17 LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 76
Query: 61 SMKDIIARYNM---HSSNISKLNHPSLE-LQLENSKYLSLSREIADKSRQLRQMRGEDLH 116
S+K I RY SSN + + + Q E SK L +I + Q R GE L
Sbjct: 77 SVKATIERYKKACSDSSNTGSIAEANAQYYQQEASK---LRAQIGNLQNQNRNFLGESLA 133
Query: 117 GLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLKQKVASSCKG 176
L + +L++LE +E+G+S++ K + + EI ++++ L N+ L+ K+A + +
Sbjct: 134 ALNLRDLRNLEQKIEKGISKIRAKKNELLFAEIEYMQKREIDLHNNNQYLRAKIAETERS 193
Query: 177 KRVVLV 182
+++ L+
Sbjct: 194 QQMNLM 199
>sp|Q39295|AGL15_BRANA Agamous-like MADS-box protein AGL15 OS=Brassica napus GN=AGL15 PE=3
SV=1
Length = 264
Score = 119 bits (299), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/231 (39%), Positives = 134/231 (58%), Gaps = 10/231 (4%)
Query: 1 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSS 60
M R KI+I++I+N +RQVTFSKRR GL KKA ELSVLCDAEV VI+FS +GKLFE SS+
Sbjct: 1 MGRGKIEIKRIENANSRQVTFSKRRAGLLKKAHELSVLCDAEVAVIVFSKSGKLFEFSST 60
Query: 61 SMKDIIARYNMH--SSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGL 118
SMK + RY + SS++ +N + E Q E ++ L EI+ + M+G+ L+ L
Sbjct: 61 SMKKTLLRYGNYQISSDVPGINCKT-ENQEECTEVDLLKDEISMLQEKHLHMQGKPLNLL 119
Query: 119 TIEELQHLETMLEQGLSRVLQTKGDRIMNEI--STLERKGAKLLEENKNLKQKVA---SS 173
+++ELQHLE L L V + K + ++ S L+ + A+L EN+ L+++V S
Sbjct: 120 SLKELQHLEKQLNFSLISVRERKELLLTKQLEESRLKEQRAEL--ENETLRRQVQELRSF 177
Query: 174 CKGKRVVLVDSDIAIQEEGMSSESVNNVCSCSSGPPPEDDSSDTSLKLGLP 224
S I + ++N C ++ +SDT+L+LGLP
Sbjct: 178 LPSINQHYAPSYIRCFAIDPKNSLLSNTCLGDINCSLQNTNSDTTLQLGLP 228
>sp|P0C5B2|MAD56_ORYSJ MADS-box transcription factor 56 OS=Oryza sativa subsp. japonica
GN=MADS56 PE=2 SV=1
Length = 233
Score = 119 bits (299), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/174 (41%), Positives = 117/174 (67%), Gaps = 9/174 (5%)
Query: 1 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSS 59
M R + ++++I+N T+RQVTFSKRR GL KKA ELSVLCDAEV +I+FS G+L+E +S+
Sbjct: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60
Query: 60 SSMKDIIARYNMHSSNISKLNHPSLELQLENSK--YLSLSR--EIADKSRQLRQMRGEDL 115
S++ I RY ++ + +N+ +++ ++ K L L++ E D+SR R++ GE+L
Sbjct: 61 PSLQKTIDRYKAYTKD--HVNNKTIQQDIQQVKDDTLGLAKKLEALDESR--RKILGENL 116
Query: 116 HGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLKQK 169
G +IEEL+ LE LE+ L ++ K + + +I+ L+ K LL++N+NL+ K
Sbjct: 117 EGFSIEELRGLEMKLEKSLHKIRLKKTELLEQQIAKLKEKERTLLKDNENLRGK 170
>sp|O82743|AGL19_ARATH Agamous-like MADS-box protein AGL19 OS=Arabidopsis thaliana
GN=AGL19 PE=1 SV=1
Length = 219
Score = 119 bits (298), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/172 (44%), Positives = 105/172 (61%), Gaps = 6/172 (3%)
Query: 1 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSS 60
M R K ++++I+N T+RQVTFSKRR GL KKA ELSVLCDAEV ++IFS KL+E SSS
Sbjct: 1 MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALVIFSPRSKLYEFSSS 60
Query: 61 SMKDIIARYNMHSSNIS---KLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHG 117
S+ I RY I K N S + + E S L+++I R++ GE +
Sbjct: 61 SIAATIERYQRRIKEIGNNHKRNDNSQQARDETS---GLTKKIEQLEISKRKLLGEGIDA 117
Query: 118 LTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLKQK 169
+IEELQ LE L++ LSR+ K + EI L+ + L++ENK+LK+K
Sbjct: 118 CSIEELQQLENQLDRSLSRIRAKKYQLLREEIEKLKAEERNLVKENKDLKEK 169
>sp|P17839|AG_ARATH Floral homeotic protein AGAMOUS OS=Arabidopsis thaliana GN=AG PE=1
SV=2
Length = 252
Score = 118 bits (296), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 129/219 (58%), Gaps = 25/219 (11%)
Query: 2 AREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSSS 61
R KI+I++I+N T RQVTF KRR GL KKA ELSVLCDAEV +I+FS+ G+L+E S++S
Sbjct: 18 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNS 77
Query: 62 MKDIIARY------NMHSSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDL 115
+K I RY N ++ +++++N + Q E++K L ++I RQ+ GE +
Sbjct: 78 VKGTIERYKKAISDNSNTGSVAEIN--AQYYQQESAK---LRQQIISIQNSNRQLMGETI 132
Query: 116 HGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLKQKVASSCK 175
++ +EL++LE LE+ ++R+ K + + +EI ++++ L +N+ L+ K+A + +
Sbjct: 133 GSMSPKELRNLEGRLERSITRIRSKKNELLFSEIDYMQKREVDLHNDNQILRAKIAENER 192
Query: 176 GKRVVLVDSDIAIQEEGMSSESVNNVCSCSSGPPPEDDS 214
+ I++ G + E + PPP+ S
Sbjct: 193 N------NPSISLMPGGSNYEQL--------MPPPQTQS 217
>sp|Q9SBK9|CAL_BRARP Transcription factor CAULIFLOWER OS=Brassica rapa subsp. pekinensis
GN=CAL PE=2 SV=1
Length = 254
Score = 118 bits (295), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 105/174 (60%), Gaps = 4/174 (2%)
Query: 1 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSS 60
M R ++++++I+N RQVTFSKRR GL KKA E+S+LCDAEV +I+FS GKLFE SS
Sbjct: 1 MGRGRVEMKRIENKINRQVTFSKRRAGLLKKAHEISILCDAEVSLIVFSHKGKLFEYSSE 60
Query: 61 S-MKDIIARYNMHSSNISKLNHPSLELQLENSKYLSLSR---EIADKSRQLRQMRGEDLH 116
S M+ ++ RY +S +L P + + + + SR +I R R GEDL
Sbjct: 61 SCMEKVLERYERYSYAEKQLKAPDSHVNAQTNWSMEYSRLKAKIELLERNQRHYLGEDLE 120
Query: 117 GLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLKQKV 170
++I+ELQ+LE L+ L + K + ++ L+RK ++LEEN L +++
Sbjct: 121 SISIKELQNLEQQLDTSLKHIRSRKNQLMHESLNHLQRKEKEILEENSMLTKQI 174
>sp|Q6R4S6|CAL_BRARC Transcription factor CAULIFLOWER OS=Brassica rapa subsp. chinensis
GN=CAL PE=2 SV=1
Length = 254
Score = 118 bits (295), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 105/174 (60%), Gaps = 4/174 (2%)
Query: 1 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSS 60
M R ++++++I+N RQVTFSKRR GL KKA E+S+LCDAEV +I+FS GKLFE SS
Sbjct: 1 MGRGRVEMKRIENKINRQVTFSKRRAGLLKKAHEISILCDAEVSLIVFSHKGKLFEYSSE 60
Query: 61 S-MKDIIARYNMHSSNISKLNHPSLELQLENSKYLSLSR---EIADKSRQLRQMRGEDLH 116
S M+ ++ RY +S +L P + + + + SR +I R R GEDL
Sbjct: 61 SCMEKVLERYERYSYAEKQLKAPDSHVNAQTNWSMEYSRLKAKIELLERNQRHYLGEDLE 120
Query: 117 GLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLKQKV 170
++I+ELQ+LE L+ L + K + ++ L+RK ++LEEN L +++
Sbjct: 121 SISIKELQNLEQQLDTSLKHIRSRKNQLMHESLNHLQRKEKEILEENSMLTKQI 174
>sp|Q6R4S3|CAL_BRARA Transcription factor CAULIFLOWER OS=Brassica rapa GN=CAL PE=2 SV=1
Length = 254
Score = 118 bits (295), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 105/174 (60%), Gaps = 4/174 (2%)
Query: 1 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSS 60
M R ++++++I+N RQVTFSKRR GL KKA E+S+LCDAEV +I+FS GKLFE SS
Sbjct: 1 MGRGRVEMKRIENKINRQVTFSKRRAGLLKKAHEISILCDAEVSLIVFSHKGKLFEYSSE 60
Query: 61 S-MKDIIARYNMHSSNISKLNHPSLELQLENSKYLSLSR---EIADKSRQLRQMRGEDLH 116
S M+ ++ RY +S +L P + + + + SR +I R R GEDL
Sbjct: 61 SCMEKVLERYERYSYAEKQLKAPDSHVNAQTNWSMEYSRLKAKIELLERNQRHYLGEDLE 120
Query: 117 GLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLKQKV 170
++I+ELQ+LE L+ L + K + ++ L+RK ++LEEN L +++
Sbjct: 121 SISIKELQNLEQQLDTSLKHIRSRKNQLMHESLNHLQRKEKEILEENSMLTKQI 174
>sp|O64645|SOC1_ARATH MADS-box protein SOC1 OS=Arabidopsis thaliana GN=SOC1 PE=1 SV=1
Length = 214
Score = 118 bits (295), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/175 (41%), Positives = 107/175 (61%), Gaps = 5/175 (2%)
Query: 1 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSS 60
M R K ++++I+N T+RQVTFSKRR GL KKA ELSVLCDAEV +IIFS GKL+E +SS
Sbjct: 1 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFASS 60
Query: 61 SMKDIIARYNMHSSN-ISKLNHPSLELQLENSKY--LSLSREIADKSRQLRQMRGEDLHG 117
+M+D I RY H+ + +S P E +++ KY ++ ++I R++ GE +
Sbjct: 61 NMQDTIDRYLRHTKDRVS--TKPVSEENMQHLKYEAANMMKKIEQLEASKRKLLGEGIGT 118
Query: 118 LTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLKQKVAS 172
+IEELQ +E LE+ + + K +I L++K L EN+ L +K S
Sbjct: 119 CSIEELQQIEQQLEKSVKCIRARKTQVFKEQIEQLKQKEKALAAENEKLSEKWGS 173
>sp|Q0J466|MADS7_ORYSJ MADS-box transcription factor 7 OS=Oryza sativa subsp. japonica
GN=MADS7 PE=1 SV=2
Length = 249
Score = 117 bits (294), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 128/230 (55%), Gaps = 8/230 (3%)
Query: 1 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSS 59
M R ++++++I+N RQVTF+KRR GL KKA ELSVLCDAEV +IIFS GKL+E S+
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
Query: 60 SSMKDIIARYNMHS---SNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLH 116
SM + +Y S + N S +L+ ++YL L + + R R + GEDL
Sbjct: 61 QSMTKTLEKYQKCSYAGPETAVQNRESEQLKASRNEYLKLKARVENLQRTQRNLLGEDLD 120
Query: 117 GLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLKQKVASS--C 174
L I+EL+ LE L+ L V T+ ++++++ L+RK + E N+ L++K+ S
Sbjct: 121 SLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTELQRKEQMVSEANRCLRRKLEESNHV 180
Query: 175 KGKRVVLVDSDIAIQEEGMSSESVNNVCSCSSGPPPEDDSSDTSLKLGLP 224
+G++V ++ E E + + P D + + +L++G P
Sbjct: 181 RGQQVWEQGCNLIGYER--QPEVQQPLHGGNGFFHPLDAAGEPTLQIGYP 228
>sp|P0C5B0|MADS7_ORYSI MADS-box transcription factor 7 OS=Oryza sativa subsp. indica
GN=MADS7 PE=2 SV=2
Length = 249
Score = 117 bits (294), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 128/230 (55%), Gaps = 8/230 (3%)
Query: 1 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSS 59
M R ++++++I+N RQVTF+KRR GL KKA ELSVLCDAEV +IIFS GKL+E S+
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
Query: 60 SSMKDIIARYNMHS---SNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLH 116
SM + +Y S + N S +L+ ++YL L + + R R + GEDL
Sbjct: 61 QSMTKTLEKYQKCSYAGPETAVQNRESEQLKASRNEYLKLKARVENLQRTQRNLLGEDLD 120
Query: 117 GLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLKQKVASS--C 174
L I+EL+ LE L+ L V T+ ++++++ L+RK + E N+ L++K+ S
Sbjct: 121 SLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTELQRKEQMVSEANRCLRRKLEESNHV 180
Query: 175 KGKRVVLVDSDIAIQEEGMSSESVNNVCSCSSGPPPEDDSSDTSLKLGLP 224
+G++V ++ E E + + P D + + +L++G P
Sbjct: 181 RGQQVWEQGCNLIGYER--QPEVQQPLHGGNGFFHPLDAAGEPTLQIGYP 228
>sp|A2Z9Q7|MAD56_ORYSI MADS-box transcription factor 56 OS=Oryza sativa subsp. indica
GN=MADS56 PE=2 SV=2
Length = 233
Score = 117 bits (292), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 72/174 (41%), Positives = 116/174 (66%), Gaps = 9/174 (5%)
Query: 1 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSS 59
M R + ++++I+N T+RQVTFSKRR GL KKA ELSVLCDAEV +I+FS G+L+E +S+
Sbjct: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60
Query: 60 SSMKDIIARYNMHSSNISKLNHPSLELQLENSK--YLSLSR--EIADKSRQLRQMRGEDL 115
S++ I RY ++ + +N+ +++ ++ K L L++ E D+SR R++ GE+L
Sbjct: 61 PSLQKTIDRYKAYTKD--HVNNKTIQQDIQQVKDDTLGLAKKLEALDESR--RKILGENL 116
Query: 116 HGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLKQK 169
G +IEEL+ LE LE+ L + K + + +I+ L+ K LL++N+NL+ K
Sbjct: 117 EGCSIEELRGLEMKLEKSLHNIRLKKTELLERQIAKLKEKERTLLKDNENLRGK 170
>sp|Q8GTF4|AP1C_BRAOB Floral homeotic protein APETALA 1 C OS=Brassica oleracea var.
botrytis GN=AP1C PE=2 SV=1
Length = 256
Score = 117 bits (292), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 104/172 (60%), Gaps = 2/172 (1%)
Query: 1 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSS 60
M R ++++++I+N RQVTFSKRR GLFKKA E+SVLCDAEV +++FS GKLFE S+
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLFKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60
Query: 61 S-MKDIIARYNMHSSNISKLNHPSLELQLENS-KYLSLSREIADKSRQLRQMRGEDLHGL 118
S M+ I+ RY +S +L P ++ S +Y L +I R R GEDL +
Sbjct: 61 SCMEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAM 120
Query: 119 TIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLKQKV 170
+ +ELQ+LE L+ L + K + + ++ L+RK + E+N L +++
Sbjct: 121 SPKELQNLEQQLDTALKHIRSRKNQLMYDSVNELQRKEKAIQEQNSMLSKQI 172
>sp|B4YPV4|AP1C_BRAOA Floral homeotic protein APETALA 1 C OS=Brassica oleracea var.
alboglabra GN=AP1C PE=3 SV=1
Length = 256
Score = 117 bits (292), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 104/172 (60%), Gaps = 2/172 (1%)
Query: 1 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSS 60
M R ++++++I+N RQVTFSKRR GLFKKA E+SVLCDAEV +++FS GKLFE S+
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLFKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60
Query: 61 S-MKDIIARYNMHSSNISKLNHPSLELQLENS-KYLSLSREIADKSRQLRQMRGEDLHGL 118
S M+ I+ RY +S +L P ++ S +Y L +I R R GEDL +
Sbjct: 61 SCMEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAM 120
Query: 119 TIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLKQKV 170
+ +ELQ+LE L+ L + K + + ++ L+RK + E+N L +++
Sbjct: 121 SPKELQNLEQQLDTALKHIRSRKNQLMYDSVNELQRKEKAIQEQNSMLSKQI 172
>sp|Q96355|1AP1_BRAOT Floral homeotic protein APETALA 1-1 OS=Brassica oleracea var.
italica GN=1AP1 PE=2 SV=1
Length = 256
Score = 117 bits (292), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 104/172 (60%), Gaps = 2/172 (1%)
Query: 1 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSS 60
M R ++++++I+N RQVTFSKRR GLFKKA E+SVLCDAEV +++FS GKLFE S+
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLFKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60
Query: 61 S-MKDIIARYNMHSSNISKLNHPSLELQLENS-KYLSLSREIADKSRQLRQMRGEDLHGL 118
S M+ I+ RY +S +L P ++ S +Y L +I R R GEDL +
Sbjct: 61 SCMEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAM 120
Query: 119 TIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLKQKV 170
+ +ELQ+LE L+ L + K + + ++ L+RK + E+N L +++
Sbjct: 121 SPKELQNLEQQLDTALKHIRSRKNQLMYDSVNELQRKEKAIQEQNSMLSKQI 172
>sp|P0DI14|AP1_BRARP Floral homeotic protein APETALA 1 OS=Brassica rapa subsp.
pekinensis GN=AP1 PE=3 SV=1
Length = 256
Score = 117 bits (292), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 104/172 (60%), Gaps = 2/172 (1%)
Query: 1 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSS 60
M R ++++++I+N RQVTFSKRR GLFKKA E+SVLCDAEV +++FS GKLFE S+
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLFKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60
Query: 61 S-MKDIIARYNMHSSNISKLNHPSLELQLENS-KYLSLSREIADKSRQLRQMRGEDLHGL 118
S M+ I+ RY +S +L P ++ S +Y L +I R R GEDL +
Sbjct: 61 SCMEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAM 120
Query: 119 TIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLKQKV 170
+ +ELQ+LE L+ L + K + + ++ L+RK + E+N L +++
Sbjct: 121 SPKELQNLEQQLDTALKHIRSRKNQLMYDSVNELQRKEKAIQEQNSMLSKQI 172
>sp|Q10PZ9|MADS1_ORYSJ MADS-box transcription factor 1 OS=Oryza sativa subsp. japonica
GN=MADS1 PE=1 SV=1
Length = 257
Score = 117 bits (292), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 77/223 (34%), Positives = 124/223 (55%), Gaps = 4/223 (1%)
Query: 1 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSS 59
M R K+++++I+N +RQVTF+KRR GL KKA ELS+LCDAEV +IIFS G+LFE SSS
Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSS 60
Query: 60 SSMKDIIARYNMHSSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLT 119
S M + RY S N + + + E ++ +YL L + R + GEDL L+
Sbjct: 61 SCMYKTLERYR--SCNYNSQDAAAPENEINYQEYLKLKTRVEFLQTTQRNILGEDLGPLS 118
Query: 120 IEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLKQKVASSCKGKRV 179
++EL+ LE +E L ++ K +++++ L+ K +L + NK+L++K+ + + V
Sbjct: 119 MKELEQLENQIEVSLKQIRSRKNQALLDQLFDLKSKEQQLQDLNKDLRKKLQETS-AENV 177
Query: 180 VLVDSDIAIQEEGMSSESVNNVCSCSSGPPPEDDSSDTSLKLG 222
+ + G S+ + P D D SL++G
Sbjct: 178 LHMSWQDGGGHSGSSTVLADQPHHHQGLLHPHPDQGDHSLQIG 220
>sp|A2XDY1|MADS1_ORYSI MADS-box transcription factor 1 OS=Oryza sativa subsp. indica
GN=MADS1 PE=2 SV=2
Length = 257
Score = 117 bits (292), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 77/223 (34%), Positives = 124/223 (55%), Gaps = 4/223 (1%)
Query: 1 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSS 59
M R K+++++I+N +RQVTF+KRR GL KKA ELS+LCDAEV +IIFS G+LFE SSS
Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSS 60
Query: 60 SSMKDIIARYNMHSSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLT 119
S M + RY S N + + + E ++ +YL L + R + GEDL L+
Sbjct: 61 SCMYKTLERYR--SCNYNSQDAAAPENEINYQEYLKLKTRVEFLQTTQRNILGEDLGPLS 118
Query: 120 IEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLKQKVASSCKGKRV 179
++EL+ LE +E L ++ K +++++ L+ K +L + NK+L++K+ + + V
Sbjct: 119 MKELEQLENQIEVSLKQIRSRKNQALLDQLFDLKSKEQQLQDLNKDLRKKLQETS-AENV 177
Query: 180 VLVDSDIAIQEEGMSSESVNNVCSCSSGPPPEDDSSDTSLKLG 222
+ + G S+ + P D D SL++G
Sbjct: 178 LHMSWQDGGGHSGSSTVLADQPHHHQGLLHPHPDQGDHSLQIG 220
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.128 0.337
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,780,922
Number of Sequences: 539616
Number of extensions: 2728090
Number of successful extensions: 10273
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 184
Number of HSP's successfully gapped in prelim test: 117
Number of HSP's that attempted gapping in prelim test: 9915
Number of HSP's gapped (non-prelim): 365
length of query: 227
length of database: 191,569,459
effective HSP length: 113
effective length of query: 114
effective length of database: 130,592,851
effective search space: 14887585014
effective search space used: 14887585014
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 59 (27.3 bits)