Query 027199
Match_columns 226
No_of_seqs 252 out of 1152
Neff 5.7
Searched_HMMs 13730
Date Mon Mar 25 10:16:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027199.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/027199hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1dx5i2 g.3.11.1 (I:388-422) T 43.4 3.6 0.00026 23.6 0.8 12 211-222 15-26 (35)
2 d2j5ha1 g.3.11.7 (A:1-39) Crip 37.5 6.6 0.00048 23.0 1.4 12 211-222 15-26 (39)
3 d1wt8a1 g.3.7.2 (A:1-31) Bmkx 13.3 22 0.0016 19.2 0.2 8 217-224 21-28 (31)
4 d2i9aa1 g.3.11.1 (A:10-49) Pla 12.2 23 0.0017 20.5 0.1 16 207-222 13-28 (40)
5 d1lu0a_ g.3.2.1 (A:) Trypsin i 11.9 42 0.0031 18.1 1.2 14 211-224 15-29 (29)
6 d1xdtr_ g.3.11.1 (R:) Heparin- 7.3 58 0.0042 18.8 0.6 11 212-222 22-32 (41)
7 d1lmja1 g.3.11.1 (A:3-46) Fibr 6.7 55 0.004 19.0 0.3 8 215-222 26-33 (44)
8 d1k36a_ g.3.11.1 (A:) Epiregul 6.3 58 0.0042 19.1 0.2 9 214-222 28-36 (46)
9 d1i0ua2 g.3.11.1 (A:42-82) Low 6.1 62 0.0045 18.3 0.3 9 214-222 21-29 (41)
10 d1apqa_ g.3.11.1 (A:) Compleme 6.0 63 0.0046 19.1 0.3 8 215-222 34-41 (53)
No 1
>d1dx5i2 g.3.11.1 (I:388-422) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}
Probab=43.37 E-value=3.6 Score=23.60 Aligned_cols=12 Identities=33% Similarity=1.068 Sum_probs=10.6
Q ss_pred CCCCCccccccc
Q 027199 211 DRTNNCRCLHGY 222 (226)
Q Consensus 211 ~~~~~~~~~~~~ 222 (226)
|..+.|.|..||
T Consensus 15 ~~p~~C~CPeGy 26 (35)
T d1dx5i2 15 NTQASCECPEGY 26 (35)
T ss_dssp TSTTCEECCTTE
T ss_pred CCCCcccCCCce
Confidence 567999999998
No 2
>d2j5ha1 g.3.11.7 (A:1-39) Cripto growth factor {Mouse (Mus musculus) [TaxId: 10090]}
Probab=37.47 E-value=6.6 Score=23.03 Aligned_cols=12 Identities=42% Similarity=1.068 Sum_probs=9.1
Q ss_pred CCCCCccccccc
Q 027199 211 DRTNNCRCLHGY 222 (226)
Q Consensus 211 ~~~~~~~~~~~~ 222 (226)
..-..|+||+|-
T Consensus 15 k~CslCrC~~G~ 26 (39)
T d2j5ha1 15 KKCSLCRCWHGQ 26 (39)
T ss_dssp CCCCCCCCCSSS
T ss_pred ccceEEEeccCc
Confidence 345789999984
No 3
>d1wt8a1 g.3.7.2 (A:1-31) Bmkx {Chinese scorpion (Buthus martensi karsch) [TaxId: 34649]}
Probab=13.25 E-value=22 Score=19.22 Aligned_cols=8 Identities=50% Similarity=1.518 Sum_probs=6.9
Q ss_pred cccccccc
Q 027199 217 RCLHGYCS 224 (226)
Q Consensus 217 ~~~~~~~~ 224 (226)
||-.|||.
T Consensus 21 sckngycq 28 (31)
T d1wt8a1 21 SCKNGYCQ 28 (31)
T ss_dssp CCCSEECT
T ss_pred eecCcccc
Confidence 78899996
No 4
>d2i9aa1 g.3.11.1 (A:10-49) Plasminogen activator (urokinase-type) {Human (Homo sapiens) [TaxId: 9606]}
Probab=12.21 E-value=23 Score=20.55 Aligned_cols=16 Identities=19% Similarity=0.588 Sum_probs=12.7
Q ss_pred ccccCCCCCccccccc
Q 027199 207 DLYNDRTNNCRCLHGY 222 (226)
Q Consensus 207 ~~y~~~~~~~~~~~~~ 222 (226)
..|=+++..|+|..+|
T Consensus 13 yk~FS~I~rC~CPk~f 28 (40)
T d2i9aa1 13 NKYFSNIHWCNCPKKF 28 (40)
T ss_dssp CSSSTTCEEEECCTTE
T ss_pred EehhcCCEEecCCccc
Confidence 3466788999999887
No 5
>d1lu0a_ g.3.2.1 (A:) Trypsin inhibitor {Squash (Cucurbita maxima) [TaxId: 3661]}
Probab=11.88 E-value=42 Score=18.14 Aligned_cols=14 Identities=57% Similarity=1.405 Sum_probs=9.9
Q ss_pred CCCCCcccc-ccccc
Q 027199 211 DRTNNCRCL-HGYCS 224 (226)
Q Consensus 211 ~~~~~~~~~-~~~~~ 224 (226)
+-+..|.|. ||||.
T Consensus 15 DCla~CvC~~~G~CG 29 (29)
T d1lu0a_ 15 DCLAECVCLEHGYCG 29 (29)
T ss_dssp GSCTTCCBCTTSBBC
T ss_pred cchhhceecccccCC
Confidence 345778884 89995
No 6
>d1xdtr_ g.3.11.1 (R:) Heparin-binding epidermal growth factor, HBEGF {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.31 E-value=58 Score=18.79 Aligned_cols=11 Identities=45% Similarity=1.129 Sum_probs=9.0
Q ss_pred CCCCccccccc
Q 027199 212 RTNNCRCLHGY 222 (226)
Q Consensus 212 ~~~~~~~~~~~ 222 (226)
+...|+|..||
T Consensus 22 ~~~~C~C~~gY 32 (41)
T d1xdtr_ 22 RAPSCICHPGY 32 (41)
T ss_dssp TBCCEEECTTE
T ss_pred CCceeECCCCC
Confidence 35789999998
No 7
>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.70 E-value=55 Score=19.01 Aligned_cols=8 Identities=50% Similarity=1.555 Sum_probs=5.8
Q ss_pred Cccccccc
Q 027199 215 NCRCLHGY 222 (226)
Q Consensus 215 ~~~~~~~~ 222 (226)
.|+|..||
T Consensus 26 ~C~C~~Gy 33 (44)
T d1lmja1 26 ECKCDEGY 33 (44)
T ss_dssp EECCCSSE
T ss_pred EEeCCCCC
Confidence 47777776
No 8
>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.27 E-value=58 Score=19.14 Aligned_cols=9 Identities=67% Similarity=1.468 Sum_probs=7.5
Q ss_pred CCccccccc
Q 027199 214 NNCRCLHGY 222 (226)
Q Consensus 214 ~~~~~~~~~ 222 (226)
..|+|.+||
T Consensus 28 ~~C~C~~gY 36 (46)
T d1k36a_ 28 NYCRCEVGY 36 (46)
T ss_dssp EEEEECTTC
T ss_pred cEeECCCCc
Confidence 569999988
No 9
>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.11 E-value=62 Score=18.28 Aligned_cols=9 Identities=33% Similarity=1.228 Sum_probs=7.0
Q ss_pred CCccccccc
Q 027199 214 NNCRCLHGY 222 (226)
Q Consensus 214 ~~~~~~~~~ 222 (226)
-.|+|..||
T Consensus 21 y~C~C~~Gy 29 (41)
T d1i0ua2 21 YKCQCEEGF 29 (41)
T ss_dssp CEECCCTTE
T ss_pred EEeECCCCC
Confidence 468888887
No 10
>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.02 E-value=63 Score=19.10 Aligned_cols=8 Identities=50% Similarity=1.281 Sum_probs=5.4
Q ss_pred Cccccccc
Q 027199 215 NCRCLHGY 222 (226)
Q Consensus 215 ~~~~~~~~ 222 (226)
.|+|..||
T Consensus 34 ~C~C~~Gy 41 (53)
T d1apqa_ 34 FCSCRPGY 41 (53)
T ss_dssp EEECSTTC
T ss_pred EeECCCCC
Confidence 46777776
Done!