BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027204
(226 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6DJ87|CC90B_XENTR Coiled-coil domain-containing protein 90B, mitochondrial OS=Xenopus
tropicalis GN=ccdc90b PE=2 SV=2
Length = 267
Score = 89.4 bits (220), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 112/227 (49%), Gaps = 22/227 (9%)
Query: 19 TKSQGFNLNYSNTIGY--RQISQLVKSNGKRAFLVDTLQLVRGLEAQGVPSKQAEAITAA 76
T +GF + + GY RQ+ + +R DT LVR LE G QAE I +A
Sbjct: 42 TWKKGFATSAALPAGYDVRQVE--ITPLEQRKLTFDTHALVRELETHGFDKVQAETIVSA 99
Query: 77 ITEVLNDSLENVAHTFVSKGEMQKTEMIQEANLSKFKSEVQSSQEHHFSMLQRETEKLRS 136
+ + N S++ V V++ + + T A+L + ++ ++ F+ L+ E EK++
Sbjct: 100 LATLTNASIDTVYRDMVTRAQQEITVQQIMAHLDSIRKDMVILEKSEFATLRAENEKMKI 159
Query: 137 DIEKMRSELRYEIDKVTAGQRLDLNLERGRIRD--------------ELANQNAET---- 178
++E +R L E ++++A +LD+NLER R+ D E +NA T
Sbjct: 160 ELEHVRQHLLNETNRISADAKLDMNLERSRLTDLFTEQEKKLMEASTEFHKKNATTDSVI 219
Query: 179 TNLTNKLDREIHALRAHMEAAKYDVIKYCIGTLVSISAVGLAIVRIL 225
T + K+D +I +L+ ME+ K D ++Y ++ + A+ L R+
Sbjct: 220 TEINKKIDIDIASLKTLMESHKLDTVRYMAASVFTCLAIALGFYRLW 266
>sp|P43557|FMP32_YEAST Protein FMP32, mitochondrial OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=FMP32 PE=1 SV=1
Length = 207
Score = 87.0 bits (214), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 92/157 (58%)
Query: 69 QAEAITAAITEVLNDSLENVAHTFVSKGEMQKTEMIQEANLSKFKSEVQSSQEHHFSMLQ 128
QA I +T+ + + +V+ + ++ + Q + +K + ++ S+ F +Q
Sbjct: 50 QATTIVEIMTDAIRGGVNHVSQDLAKREKLTQLSYQQRVDFAKLRDQLLSADRSEFHNIQ 109
Query: 129 RETEKLRSDIEKMRSELRYEIDKVTAGQRLDLNLERGRIRDELANQNAETTNLTNKLDRE 188
E E +++D+EK+R++LR EI K AG +LDL+LE+GRIR+E ++ + + + K+++E
Sbjct: 110 NEYESVKNDLEKLRNKLREEITKTNAGFKLDLSLEKGRIREESSHHDLQIKEIDTKIEQE 169
Query: 189 IHALRAHMEAAKYDVIKYCIGTLVSISAVGLAIVRIL 225
+ ++ +++ K V+++ IG A+ LA +R+L
Sbjct: 170 VTNMKMQIDSVKTQVMQWLIGVCTGTFALVLAYMRLL 206
>sp|Q9GZT6|CC90B_HUMAN Coiled-coil domain-containing protein 90B, mitochondrial OS=Homo
sapiens GN=CCDC90B PE=1 SV=2
Length = 254
Score = 86.3 bits (212), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 101/198 (51%), Gaps = 18/198 (9%)
Query: 46 KRAFLVDTLQLVRGLEAQGVPSKQAEAITAAITEVLNDSLENVAHTFVSKGEMQKTEMIQ 105
+R DT LV+ LE G QAE I +A+T + N SL+ + V++ + + T
Sbjct: 56 QRKLTFDTHALVQDLETHGFDKTQAETIVSALTALSNVSLDTIYKEMVTQAQQEITVQQL 115
Query: 106 EANLSKFKSEVQSSQEHHFSMLQRETEKLRSDIEKMRSELRYEIDKVTAGQRLDLNLERG 165
A+L + ++ ++ F+ L+ E EK++ ++++++ +L +E ++ A +LD+NLER
Sbjct: 116 MAHLDAIRKDMVILEKSEFANLRAENEKMKIELDQVKQQLMHETSRIRADNKLDINLERS 175
Query: 166 RIRDELANQNAE----TTNLT--------------NKLDREIHALRAHMEAAKYDVIKYC 207
R+ D +Q + TT T NK+D EI +L+ ME+ K + I+Y
Sbjct: 176 RVTDMFTDQEKQLMETTTEFTKKDTQTKSIISETSNKIDAEIASLKTLMESNKLETIRYL 235
Query: 208 IGTLVSISAVGLAIVRIL 225
++ + A+ L R
Sbjct: 236 AASVFTCLAIALGFYRFW 253
>sp|O14042|FMP32_SCHPO Protein fmp32, mitochondrial OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=fmp32 PE=3 SV=1
Length = 216
Score = 83.6 bits (205), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 102/191 (53%), Gaps = 5/191 (2%)
Query: 41 VKSNGKRAFL-----VDTLQLVRGLEAQGVPSKQAEAITAAITEVLNDSLENVAHTFVSK 95
V+S G F ++L+ VR L+ G+ K++E + I+ V +D E ++ V+K
Sbjct: 26 VRSLGLNGFYRKYHGFNSLRFVRVLQEAGIDDKKSETLMRLISNVYSDMHEKISDFSVTK 85
Query: 96 GEMQKTEMIQEANLSKFKSEVQSSQEHHFSMLQRETEKLRSDIEKMRSELRYEIDKVTAG 155
+ + Q+ + + +SE+QS + L + E+L SD+E++++ R +++ T+
Sbjct: 86 EQQDRVMYQQKVDFAHLRSELQSIERQEMVALHSQVEQLFSDVERLKTSFRDQLNNSTSE 145
Query: 156 QRLDLNLERGRIRDELANQNAETTNLTNKLDREIHALRAHMEAAKYDVIKYCIGTLVSIS 215
RL LN++R DE A+Q+ + L+ ++D E+ R + + K +++ G +
Sbjct: 146 ARLQLNIDRLNHYDETASQDLKLRELSAEIDTEMSNFRTQLASFKTQTLQWVFGIVTGSG 205
Query: 216 AVGLAIVRILM 226
A+ LA VR+++
Sbjct: 206 ALLLAYVRLII 216
>sp|Q8C3X2|CC90B_MOUSE Coiled-coil domain-containing protein 90B, mitochondrial OS=Mus
musculus GN=Ccdc90b PE=2 SV=1
Length = 256
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 103/198 (52%), Gaps = 18/198 (9%)
Query: 46 KRAFLVDTLQLVRGLEAQGVPSKQAEAITAAITEVLNDSLENVAHTFVSKGEMQKTEMIQ 105
+R DT LV+ LE G QA+ I + ++ + N SL+ + V+K + + T
Sbjct: 56 QRKLTFDTHALVQDLETHGFDKTQAQTIVSVLSTLSNVSLDTIYKEMVTKAQQEITVQQL 115
Query: 106 EANLSKFKSEVQSSQEHHFSMLQRETEKLRSDIEKMRSELRYEIDKVTAGQRLDLNLERG 165
A+L + ++ ++ F+ L+ E EK++ ++++++ +L E ++ A +LD+NLER
Sbjct: 116 MAHLDSIRKDMVILEKSEFANLRAENEKMKIELDQVKQQLTNETSRIRADNKLDINLERS 175
Query: 166 RIRD--------------ELANQNAETTNL----TNKLDREIHALRAHMEAAKYDVIKYC 207
R+ D E A ++ +T ++ +NK+D EI +L+ ME++K + I+Y
Sbjct: 176 RVTDMFTDQEKQLIEATNEFAKKDTQTKSIISETSNKIDTEIASLKTLMESSKLETIRYL 235
Query: 208 IGTLVSISAVGLAIVRIL 225
++ + A+ L R
Sbjct: 236 AASVFTCLAIALGFYRFW 253
>sp|Q4V897|CC90B_RAT Coiled-coil domain-containing protein 90B, mitochondrial OS=Rattus
norvegicus GN=Ccdc90b PE=2 SV=1
Length = 256
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 100/198 (50%), Gaps = 18/198 (9%)
Query: 46 KRAFLVDTLQLVRGLEAQGVPSKQAEAITAAITEVLNDSLENVAHTFVSKGEMQKTEMIQ 105
+R DT LV+ LE G QA+ I + ++ + N SL+ V V+K + + T
Sbjct: 56 QRKLTFDTHALVQDLETHGFDKGQAQTIVSVLSTLSNVSLDTVYKEMVTKAQQEITIQQL 115
Query: 106 EANLSKFKSEVQSSQEHHFSMLQRETEKLRSDIEKMRSELRYEIDKVTAGQRLDLNLERG 165
A+L + ++ ++ F+ L+ E EK++ ++++++ +L E ++ A RLD+NLER
Sbjct: 116 MAHLDSIRKDMVILEKSEFANLRAENEKMKIELDQVKQQLINETSRIRADNRLDINLERS 175
Query: 166 RIRDELANQNA---ETTN---------------LTNKLDREIHALRAHMEAAKYDVIKYC 207
R+ D +Q E TN +NK+D EI +L+ ME++K + I+Y
Sbjct: 176 RVTDMFTDQEKQLMEATNEFTKKDMQTKSIISETSNKIDTEIASLKTLMESSKLETIRYL 235
Query: 208 IGTLVSISAVGLAIVRIL 225
++ + A+ L R
Sbjct: 236 AASVFTCLAIALGFYRFW 253
>sp|Q0P4J6|MCUR1_XENTR Mitochondrial calcium uniporter regulator 1 OS=Xenopus tropicalis
GN=ccdc90a PE=2 SV=1
Length = 262
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 119/229 (51%), Gaps = 21/229 (9%)
Query: 17 RVTKSQGFNLNYSNTIGYRQISQLVKSNGKRAFLVDTLQLVRGLEAQGVPSKQAEAITAA 76
RVT + FN+ ++T+ Y + + ++ + + DT +V+ LEA G ++Q+E + +A
Sbjct: 36 RVTCFRDFNI-ITSTMQYNLDKRNIYTSVGKHYFFDTHAVVQLLEANGFSAEQSEIVVSA 94
Query: 77 ITEVLNDSLENVAHTFVSKGEMQKTEMIQEANL-SKFKSEVQSSQEHHFSMLQRETEKLR 135
+ ++LN ++ N+ H + E Q+ + Q +L + K ++ ++ FS L+ + EK++
Sbjct: 95 LVKILNVNM-NLIHKDMVTKEQQEISLQQVMSLIASVKKDMIILEKSEFSALRTQNEKVK 153
Query: 136 SDIEKMRSELRYEIDKVTAGQRLDLNLERGRIRDELAN------------------QNAE 177
++++++ +L I KV A +LD NLE+ R+++ A+ Q+
Sbjct: 154 IELQQLKKQLNDSIVKVRASNKLDFNLEKSRVKEMHADNERKLLELRTSIVELHSQQDRG 213
Query: 178 TTNLTNKLDREIHALRAHMEAAKYDVIKYCIGTLVSISAVGLAIVRILM 226
T K+D E+ ++ E+ K D IKY G++ + + L R+ +
Sbjct: 214 LTQTKRKIDTEVSGVKTMQESHKLDTIKYLAGSVFTCLTIALGFYRLWI 262
>sp|Q96AQ8|MCUR1_HUMAN Mitochondrial calcium uniporter regulator 1 OS=Homo sapiens
GN=CCDC90A PE=1 SV=1
Length = 359
Score = 75.1 bits (183), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 104/204 (50%), Gaps = 22/204 (10%)
Query: 43 SNGKRAFLVDTLQLVRGLEAQGVPSKQAEAITAAITEVLNDSLENVAHTFVSKGEMQKTE 102
S+G R DT LV LE G ++QAE I +A+ ++L +++ V V+K MQ+
Sbjct: 158 SSGSRKLYFDTHALVCLLEDNGFATQQAEIIVSALVKILEANMDIVYKDMVTK--MQQEI 215
Query: 103 MIQE--ANLSKFKSEVQSSQEHHFSMLQRETEKLRSDIEKMRSELRYEIDKVTAGQRLDL 160
Q+ + ++ K ++ ++ FS L+ E EK++ ++ +++ ++ E+ KV +LD
Sbjct: 216 TFQQVMSQIANVKKDMIILEKSEFSALRAENEKIKLELHQLKQQVMDEVIKVRTDTKLDF 275
Query: 161 NLERGRIRD----------EL--------ANQNAETTNLTNKLDREIHALRAHMEAAKYD 202
NLE+ R+++ EL A Q+ T K++ E+ L+ +E+ K D
Sbjct: 276 NLEKSRVKELYSLNEKKLLELRTEIVALHAQQDRALTQTDRKIETEVAGLKTMLESHKLD 335
Query: 203 VIKYCIGTLVSISAVGLAIVRILM 226
IKY G++ + V L R+ +
Sbjct: 336 NIKYLAGSIFTCLTVALGFYRLWI 359
>sp|Q9CXD6|MCUR1_MOUSE Mitochondrial calcium uniporter regulator 1 OS=Mus musculus
GN=Ccdc90a PE=2 SV=1
Length = 340
Score = 70.9 bits (172), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 100/200 (50%), Gaps = 22/200 (11%)
Query: 47 RAFLVDTLQLVRGLEAQGVPSKQAEAITAAITEVLNDSLENVAHTFVSKGEMQKTEMIQE 106
R DT LV LEA G +QAE I +A+ ++ ++ + VSK MQ+ +Q+
Sbjct: 143 RQLYFDTHALVCLLEANGFTIQQAEIIVSALVKITETNMNIIYKDMVSK--MQQEIALQQ 200
Query: 107 --ANLSKFKSEVQSSQEHHFSMLQRETEKLRSDIEKMRSELRYEIDKVTAGQRLDLNLER 164
+ ++ K ++ ++ FS L+ E EK++ ++ +++ ++ E+ KV +L+ NLE+
Sbjct: 201 VLSKIANVKKDMVILEKSEFSALRAENEKIKLELHQLKQQVMDEVTKVRTDTKLNFNLEK 260
Query: 165 GRIRD----------EL--------ANQNAETTNLTNKLDREIHALRAHMEAAKYDVIKY 206
R+++ EL A Q+ T K++ E+ L+ +EA K D IKY
Sbjct: 261 SRVKELYSLNEKKMLELRTEIVSLHAQQDRALTQTDRKIETEVAGLKTMLEAHKLDTIKY 320
Query: 207 CIGTLVSISAVGLAIVRILM 226
G++ + V L R+ +
Sbjct: 321 LAGSVFTCLTVALGFYRLWI 340
>sp|Q10073|YAN8_SCHPO Uncharacterized CCDC90 family protein C3H1.08c, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC3H1.08c PE=3 SV=1
Length = 211
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 65/122 (53%)
Query: 55 QLVRGLEAQGVPSKQAEAITAAITEVLNDSLENVAHTFVSKGEMQKTEMIQEANLSKFKS 114
Q R LE G K AE IT + + ++L + K + + Q+ + +
Sbjct: 41 QSSRRLEQAGYSVKNAETITNLMRTITGEALTELEKNIGFKAKQESVSFQQKRTFLQIRK 100
Query: 115 EVQSSQEHHFSMLQRETEKLRSDIEKMRSELRYEIDKVTAGQRLDLNLERGRIRDELANQ 174
+++ +E+ F +++ ++KL ++IEK +S LR ++ + RL+LNLE+GR++D ++
Sbjct: 101 YLETIEENEFDKVRKSSDKLINEIEKTKSSLREDVKTALSEVRLNLNLEKGRMKDAATSR 160
Query: 175 NA 176
N
Sbjct: 161 NT 162
>sp|O42997|YBC7_SCHPO Uncharacterized protein C27B12.07 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=pi071 PE=4 SV=1
Length = 290
Score = 39.7 bits (91), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/175 (17%), Positives = 78/175 (44%)
Query: 48 AFLVDTLQLVRGLEAQGVPSKQAEAITAAITEVLNDSLENVAHTFVSKGEMQKTEMIQEA 107
+ +T ++ L +G K+AE + + D L + ++S+ + + +
Sbjct: 76 GYHFNTFTFLKTLMDKGYTEKEAEGLLEVTNMFVTDMLRHSHLNYLSEADFENCSYLFRT 135
Query: 108 NLSKFKSEVQSSQEHHFSMLQRETEKLRSDIEKMRSELRYEIDKVTAGQRLDLNLERGRI 167
LS+ +SE + ++ S L+ + ++E + + +++K+ +++ +
Sbjct: 136 ALSELRSEKINMRKDQISSLRSGLFSNQREVESLEQLVHEQLNKLNTESKMEFENRKNDT 195
Query: 168 RDELANQNAETTNLTNKLDREIHALRAHMEAAKYDVIKYCIGTLVSISAVGLAIV 222
++E+ +A L N L + LRA E K+D I+ G +++ + + ++
Sbjct: 196 KNEVQQLSARIVELHNLLAVSLGKLRAENERQKWDQIRKAAGVVMAFTGFLVLVI 250
>sp|Q2NY41|GLNE_XANOM Glutamate-ammonia-ligase adenylyltransferase OS=Xanthomonas oryzae
pv. oryzae (strain MAFF 311018) GN=glnE PE=3 SV=1
Length = 941
Score = 36.2 bits (82), Expect = 0.21, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Query: 119 SQEHHFSMLQ-RETEKLRSDIEKMRSELRYEIDKVTAGQRLDLNLERGRIRD 169
+Q +++++ R+T +L D+ KMR+ +R E+D+ AG RLDL G + D
Sbjct: 789 AQVRRYTLMRVRDTAQLHEDVRKMRARMRTELDRSDAG-RLDLKQGAGGLVD 839
>sp|Q8PPY3|GLNE_XANAC Glutamate-ammonia-ligase adenylyltransferase OS=Xanthomonas
axonopodis pv. citri (strain 306) GN=glnE PE=3 SV=1
Length = 941
Score = 35.8 bits (81), Expect = 0.22, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 126 MLQRETEKLRSDIEKMRSELRYEIDKVTAGQRLDLNLERGRIRD 169
M R+T +L D+ KMR+ +R E+D+ AG RLDL G + D
Sbjct: 797 MRVRDTAQLHEDVRKMRARMRAELDRSDAG-RLDLKQGAGGLVD 839
>sp|Q9ULU4|PKCB1_HUMAN Protein kinase C-binding protein 1 OS=Homo sapiens GN=ZMYND8 PE=1
SV=2
Length = 1186
Score = 35.8 bits (81), Expect = 0.22, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 44/104 (42%), Gaps = 13/104 (12%)
Query: 67 SKQAEAITAAITEVLNDSLENVAHTFVSKGEMQKTEMIQEANLSKFKSEVQSSQEHHFSM 126
SK +AI +TE+ ND +N + + A + + + E++ Q H
Sbjct: 931 SKMMDAIKGTMTEIYNDLSKNTTGSTI-------------AEIRRLRIEIEKLQWLHQQE 977
Query: 127 LQRETEKLRSDIEKMRSELRYEIDKVTAGQRLDLNLERGRIRDE 170
L L + +MR L E D++ A + L LE+ + DE
Sbjct: 978 LSEMKHNLELTMAEMRQSLEQERDRLIAEVKKQLELEKQQAVDE 1021
>sp|Q6CNY5|MED5_KLULA Mediator of RNA polymerase II transcription subunit 5
OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=NUT1 PE=3
SV=1
Length = 1067
Score = 33.9 bits (76), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 24 FNLNYSNTIGYRQISQLVKSNGKRAFLVDTLQ-LVRGLEAQGVPSKQAEAITAAITEVLN 82
+NL+ S Y + +L+K FLVD+++ L + A G+P Q + T+AI +V N
Sbjct: 876 WNLHSSTYYNYDYLLELIKLITPEKFLVDSIRTLTYKVAAYGIPGVQGKLNTSAIEQVAN 935
>sp|Q9Y4I1|MYO5A_HUMAN Unconventional myosin-Va OS=Homo sapiens GN=MYO5A PE=1 SV=2
Length = 1855
Score = 33.1 bits (74), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 130 ETEKLRSDIEKMRSELRYEIDKVTAGQRLDLNLERGRIRDELANQNAETTNLTNKLDR 187
ETEKLRSD+E++ +L E KV G+ L L E ++R +L +E + DR
Sbjct: 960 ETEKLRSDLERL--QLSEEEAKVATGRVLSLQEEIAKLRKDLEQTRSEKKCIEEHADR 1015
>sp|Q6IG03|K2C73_RAT Keratin, type II cytoskeletal 73 OS=Rattus norvegicus GN=Krt73 PE=1
SV=1
Length = 553
Score = 32.7 bits (73), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 100 KTEMIQEANLSKFKSEVQSSQEHHFSMLQRETEKLRSDIEKMRSELRYEIDKV 152
K E++Q+ +LS + ++ E H S LQ++ + L D ++ SELR D V
Sbjct: 162 KWELLQQLDLSNCRRNLEPVYEAHISSLQKQLDSLSGDRVRLDSELRGMRDAV 214
>sp|Q6NXH9|K2C73_MOUSE Keratin, type II cytoskeletal 73 OS=Mus musculus GN=Krt73 PE=1 SV=1
Length = 539
Score = 32.7 bits (73), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 100 KTEMIQEANLSKFKSEVQSSQEHHFSMLQRETEKLRSDIEKMRSELRYEIDKV 152
K E++Q+ +LS + ++ E H S LQ++ + L D ++ SELR D V
Sbjct: 162 KWELLQQLDLSNCRRNLEPVYEAHISSLQKQLDSLSGDRVRLDSELRGMRDAV 214
>sp|Q9QYF3|MYO5A_RAT Unconventional myosin-Va OS=Rattus norvegicus GN=Myo5a PE=1 SV=1
Length = 1828
Score = 32.7 bits (73), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 130 ETEKLRSDIEKMRSELRYEIDKVTAGQRLDLNLERGRIRDELANQNAETTNLTNKLDR 187
ETEKLR+D+E++ +L E KV G+ L L E ++R +L +E ++ + D+
Sbjct: 960 ETEKLRNDVERL--QLSEEEAKVATGRVLSLQEEIAKLRKDLEQTRSEKKSIEERADK 1015
>sp|Q99104|MYO5A_MOUSE Unconventional myosin-Va OS=Mus musculus GN=Myo5a PE=1 SV=2
Length = 1853
Score = 32.7 bits (73), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 130 ETEKLRSDIEKMRSELRYEIDKVTAGQRLDLNLERGRIRDELANQNAETTNLTNKLDR 187
ETEKLR+D+E++ +L E KV G+ L L E ++R +L +E ++ + D+
Sbjct: 960 ETEKLRNDVERL--QLSEEEAKVATGRVLSLQEEIAKLRKDLEQTRSEKKSIEERADK 1015
>sp|Q8ZVB2|MDH_PYRAE Malate dehydrogenase OS=Pyrobaculum aerophilum (strain ATCC 51768 /
IM2 / DSM 7523 / JCM 9630 / NBRC 100827) GN=mdh PE=3
SV=1
Length = 309
Score = 32.3 bits (72), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 27/47 (57%)
Query: 4 CKRVVKLVADSGVRVTKSQGFNLNYSNTIGYRQISQLVKSNGKRAFL 50
K VV+ +G R+T+ +GF+ N+ G +++ VK + KRA +
Sbjct: 200 LKEVVEETVKAGARITELRGFSSNWGPGAGLAIMAEAVKRDAKRALI 246
>sp|Q1INI5|HEM12_KORVE Glutamyl-tRNA reductase 2 OS=Koribacter versatilis (strain
Ellin345) GN=hemA2 PE=3 SV=1
Length = 436
Score = 32.0 bits (71), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 11/84 (13%)
Query: 83 DSLENVAHTFVS--KGEMQKTEMIQEANLSKFKSEVQ---------SSQEHHFSMLQRET 131
D L+ V H+ +S K E E I A + KF+ ++ S QEH ++ Q E
Sbjct: 298 DDLQQVVHSHISDRKDEAAHAEAIVNAEVEKFEERLRTLDVVPTIVSLQEHLETVRQAEI 357
Query: 132 EKLRSDIEKMRSELRYEIDKVTAG 155
++LR + ++ E +D +T G
Sbjct: 358 DRLRGRLGELSPEQEMAVDALTKG 381
>sp|A0Q1Z1|ARLY_CLONN Argininosuccinate lyase OS=Clostridium novyi (strain NT) GN=argH
PE=3 SV=1
Length = 437
Score = 32.0 bits (71), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 70 AEAITAAITEVLNDSLENVAHTFVSKGE-MQKTEMIQEANLSKFKSEVQSSQEHHFSMLQ 128
A++IT I E +N+ LE + + S M +Q A + KFK + + ++SM
Sbjct: 120 AKSITFEIIEYINELLEVITNLADSNDVIMPGYTHLQRAQVIKFKLHMMA----YYSMFN 175
Query: 129 RETEKLRSDIEKM 141
R+ ++L SDIE M
Sbjct: 176 RDKKRLLSDIEVM 188
>sp|P50104|STB4_YEAST Probable transcriptional regulatory protein STB4 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=STB4 PE=1
SV=1
Length = 949
Score = 32.0 bits (71), Expect = 3.9, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 13 DSGVRVTKSQGFNLNYSNTIGYRQISQLVKSNGKRAFLVDTLQLVRGLEAQGVPSKQAEA 72
+S +R T++ ++N + T+ + SQ R+ + D+ + L + SK+ +
Sbjct: 235 ESSIRTTRTNASDVNANPTVVNMKNSQEDCDTNHRSAICDSAE---ALHNNNINSKENKI 291
Query: 73 ITAAITEVLNDSLENVAHTF 92
I + IT +ND E+ TF
Sbjct: 292 INSQITNTVNDHFESPWQTF 311
>sp|C5P436|FCJ1_COCP7 Formation of crista junctions protein 1 OS=Coccidioides posadasii
(strain C735) GN=FCJ1 PE=3 SV=1
Length = 671
Score = 31.2 bits (69), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 107 ANLSKFKSEVQSSQEHHFSMLQRETEKLRSDIEKMRSELRYEIDKVTA 154
A+ K + ++++ + Q E EK R+D+EK +EL ID+V A
Sbjct: 347 ADFEKLGERIIAAKQESYKFAQEEIEKARADMEKSANELIRRIDEVRA 394
>sp|Q8CGB3|UACA_MOUSE Uveal autoantigen with coiled-coil domains and ankyrin repeats
OS=Mus musculus GN=Uaca PE=1 SV=2
Length = 1411
Score = 30.8 bits (68), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 8/73 (10%)
Query: 98 MQKTEMIQEANLSKFKSE--VQSSQ-----EHHFSMLQRETEKLRSDIEKMRSELRYEID 150
+K +Q+ NLS + E V+S+Q H F L+ E E LR + K++ E R +D
Sbjct: 268 WRKGPPLQQRNLSHTQDEGSVKSTQREQREPHSFQDLEIENEDLREKLRKIQQEQRILLD 327
Query: 151 KVTAGQRLDLNLE 163
KV G +L LN E
Sbjct: 328 KVN-GLQLQLNEE 339
>sp|Q03LA9|CAPP_STRTD Phosphoenolpyruvate carboxylase OS=Streptococcus thermophilus
(strain ATCC BAA-491 / LMD-9) GN=ppc PE=3 SV=1
Length = 940
Score = 30.8 bits (68), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Query: 98 MQKTEMIQEANLSKFKSEVQSSQEHHFSMLQRETEKLRSDIEKMRSELRYEIDKVTAGQR 157
M KT++I+E L K K+E+ + E++ S L + KL + +++ E E+D T
Sbjct: 185 MMKTDIIREKKL-KVKNEITNVMEYYNSSLIKAITKLSHEFKRLAVEKGIELDNPTP--- 240
Query: 158 LDLNLERGRIRDELANQNAETTNLTNKLDREI 189
+ + + G RD AET L+ L E+
Sbjct: 241 ITMGMWIGGDRDGNPFVTAETLKLSATLQSEV 272
>sp|Q5M4Z3|CAPP_STRT2 Phosphoenolpyruvate carboxylase OS=Streptococcus thermophilus
(strain ATCC BAA-250 / LMG 18311) GN=ppc PE=3 SV=1
Length = 940
Score = 30.8 bits (68), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Query: 98 MQKTEMIQEANLSKFKSEVQSSQEHHFSMLQRETEKLRSDIEKMRSELRYEIDKVTAGQR 157
M KT++I+E L K K+E+ + E++ S L + KL + +++ E E+D T
Sbjct: 185 MMKTDIIREKKL-KVKNEITNVMEYYNSSLIKAITKLSHEFKRLAVEKGIELDNPTP--- 240
Query: 158 LDLNLERGRIRDELANQNAETTNLTNKLDREI 189
+ + + G RD AET L+ L E+
Sbjct: 241 ITMGMWIGGDRDGNPFVTAETLKLSATLQSEV 272
>sp|Q5M0E6|CAPP_STRT1 Phosphoenolpyruvate carboxylase OS=Streptococcus thermophilus
(strain CNRZ 1066) GN=ppc PE=3 SV=1
Length = 940
Score = 30.8 bits (68), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Query: 98 MQKTEMIQEANLSKFKSEVQSSQEHHFSMLQRETEKLRSDIEKMRSELRYEIDKVTAGQR 157
M KT++I+E L K K+E+ + E++ S L + KL + +++ E E+D T
Sbjct: 185 MMKTDIIREKKL-KVKNEITNVMEYYNSSLIKAITKLSHEFKRLAVEKGIELDNPTP--- 240
Query: 158 LDLNLERGRIRDELANQNAETTNLTNKLDREI 189
+ + + G RD AET L+ L E+
Sbjct: 241 ITMGMWIGGDRDGNPFVTAETLKLSATLQSEV 272
>sp|Q9CZT4|RPC5_MOUSE DNA-directed RNA polymerase III subunit RPC5 OS=Mus musculus
GN=Polr3e PE=1 SV=2
Length = 710
Score = 30.4 bits (67), Expect = 9.8, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 62/139 (44%), Gaps = 11/139 (7%)
Query: 61 EAQGVPSKQAEAITAAITEVLNDSLENVAHTFVSKGEMQKTEMIQEANLSKFKSEVQSSQ 120
+++ V K+ A+T E + D LE++A ++KG E + +L K Q
Sbjct: 362 QSRWVVRKEVAAVTKLCAEDVKDFLEHMAVVRINKG----WEFLLPYDLEFIKKHPDVVQ 417
Query: 121 EHHFSMLQRETEKLRSDIEKMRSELRYEIDKVTAGQRLDLNLERGRIRDELANQNAETTN 180
H ML +++ +EK+ + ++ + K GQ + L G R + A A+ +
Sbjct: 418 RQH--MLW---SGIQAKLEKVYNLVKETMPKKPDGQSAPVGLVSGEQRVQTAKTKAQQNH 472
Query: 181 LTNKLDREIHALRAHMEAA 199
L+RE+ + M AA
Sbjct: 473 AF--LERELQRRKEQMRAA 489
>sp|A5DLJ8|NST1_PICGU Stress response protein NST1 OS=Meyerozyma guilliermondii (strain
ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 /
NRRL Y-324) GN=NST1 PE=3 SV=2
Length = 1107
Score = 30.4 bits (67), Expect = 10.0, Method: Composition-based stats.
Identities = 32/135 (23%), Positives = 60/135 (44%), Gaps = 7/135 (5%)
Query: 46 KRAFLVDTLQLVRGLEAQGVPSKQA---EAITAAITEVLNDSLENVAHTFVSKGEMQKTE 102
K AFL D +++ G KQ E I ++ ND L N +FV E
Sbjct: 394 KTAFLKDFGEMISGGFNDMTSGKQEQFHENFANGIHKIANDFLNNDGKSFVEMVEALSGS 453
Query: 103 MIQEANLSKFKSEVQ--SSQEHHFSMLQRETEKLRSDIEKMRSELRYEIDKVTAGQRLDL 160
+ A+L K E++ S+Q+ ++ + E+L + + +++ + +V GQ +D
Sbjct: 454 RSERADLLKSLQEIEDHSNQQEQPGTVREQIEELHDEEPVIPEDIQNQPKEVV-GQYVDQ 512
Query: 161 NLER-GRIRDELANQ 174
+ + +RD L +
Sbjct: 513 RINQLSELRDRLEEE 527
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.129 0.339
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,890,952
Number of Sequences: 539616
Number of extensions: 2340836
Number of successful extensions: 12826
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 358
Number of HSP's that attempted gapping in prelim test: 12496
Number of HSP's gapped (non-prelim): 780
length of query: 226
length of database: 191,569,459
effective HSP length: 113
effective length of query: 113
effective length of database: 130,592,851
effective search space: 14756992163
effective search space used: 14756992163
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)