Query 027209
Match_columns 226
No_of_seqs 94 out of 96
Neff 3.3
Searched_HMMs 13730
Date Mon Mar 25 10:30:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027209.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/027209hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1s0yb_ d.80.1.1 (B:) Trans-3- 15.7 20 0.0014 23.5 0.6 18 11-28 38-55 (55)
2 d1a6qa1 a.159.1.1 (A:297-368) 11.1 30 0.0022 23.6 0.5 6 215-220 49-54 (72)
3 d1c52a_ a.3.1.1 (A:) Cytochrom 8.8 67 0.0049 21.9 1.7 24 41-64 90-113 (131)
4 d1u07a_ d.212.1.2 (A:) TonB {E 7.7 25 0.0018 23.3 -1.1 43 55-97 13-55 (90)
5 d1efaa1 a.35.1.5 (A:2-60) Lac 6.2 95 0.0069 19.8 1.3 17 52-68 1-17 (59)
6 d1ayia_ a.28.2.1 (A:) ImmE7 pr 5.4 63 0.0046 22.7 -0.0 12 13-24 42-53 (86)
7 d1v37a_ c.60.1.1 (A:) Alpha-ri 5.2 91 0.0067 22.4 0.8 8 215-222 103-110 (171)
8 d2vlqa1 a.28.2.1 (A:4-84) ImmE 5.2 67 0.0049 22.3 -0.0 11 14-24 39-49 (81)
9 d1mhhe_ d.15.7.1 (E:) Immunogl 5.1 50 0.0036 22.0 -0.8 16 196-211 7-22 (63)
10 d1gxha_ a.28.2.1 (A:) ImmE8 (I 4.9 78 0.0057 22.1 0.2 12 13-24 40-51 (85)
No 1
>d1s0yb_ d.80.1.1 (B:) Trans-3-chloroacrylic acid dehalogenase beta-subunit, CaaD2 {Pseudomonas pavonaceae [TaxId: 47881]}
Probab=15.75 E-value=20 Score=23.47 Aligned_cols=18 Identities=22% Similarity=0.290 Sum_probs=15.3
Q ss_pred eEEEeecCCCCccccccc
Q 027209 11 LAIVITEHPCAFISFWRL 28 (226)
Q Consensus 11 ~~~~~~~~~~~~~~~~~r 28 (226)
+-++|.+||.+-+|++.|
T Consensus 38 inv~~~eh~~~n~sis~r 55 (55)
T d1s0yb_ 38 INVLLVEHAEANMSISGR 55 (55)
T ss_dssp CEEEEEEECGGGEESTTC
T ss_pred EEEeeeeCchhccCccCC
Confidence 456789999999999876
No 2
>d1a6qa1 a.159.1.1 (A:297-368) Protein serine/threonine phosphatase 2C, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=11.08 E-value=30 Score=23.57 Aligned_cols=6 Identities=83% Similarity=1.658 Sum_probs=3.6
Q ss_pred cCCCCC
Q 027209 215 KPPGGE 220 (226)
Q Consensus 215 kPPGGe 220 (226)
=|||||
T Consensus 49 LPPGGG 54 (72)
T d1a6qa1 49 LPPGGE 54 (72)
T ss_dssp CCTTTG
T ss_pred CCCCcc
Confidence 366665
No 3
>d1c52a_ a.3.1.1 (A:) Cytochrome c552 {Thermus thermophilus [TaxId: 274]}
Probab=8.82 E-value=67 Score=21.93 Aligned_cols=24 Identities=29% Similarity=0.380 Sum_probs=16.7
Q ss_pred eecCCCcCCCCCCCChhHhhhhhh
Q 027209 41 SFSAEETVSPKKPTSVPEVAKQRE 64 (226)
Q Consensus 41 sFg~e~~~spkKp~s~~EvAKqrE 64 (226)
+||.........|+|..|||+.|+
T Consensus 90 ~~gn~~~~~~~~~~t~~~v~~~R~ 113 (131)
T d1c52a_ 90 AWGDAKKVKGFKPFTAEEVKKLRA 113 (131)
T ss_dssp TTSTGGGSTTCCCCCHHHHHHHTT
T ss_pred HcCCCCcccCCCCCCHHHHHHHHc
Confidence 355555556667888888888875
No 4
>d1u07a_ d.212.1.2 (A:) TonB {Escherichia coli [TaxId: 562]}
Probab=7.68 E-value=25 Score=23.32 Aligned_cols=43 Identities=12% Similarity=0.305 Sum_probs=32.4
Q ss_pred ChhHhhhhhhhccccCCccccccccccchhhhhhhhcCccCCC
Q 027209 55 SVPEVAKQRELSGSLQSESDLKTKKQISDAKFKEISGHDIFSP 97 (226)
Q Consensus 55 s~~EvAKqrELsGt~~~~~~~~~~K~~S~aK~KEmsGs~IFa~ 97 (226)
.-++.|+++-+.|+..=.-.....-.+.+.++-+-+|+++|..
T Consensus 13 ~YP~~A~~~g~eG~V~v~f~I~~~G~v~~~~v~~ssg~~~ld~ 55 (90)
T d1u07a_ 13 QYPARAQALRIEGQVKVKFDVTPDGRVDNVQILSAKPANMFER 55 (90)
T ss_dssp CCCHHHHHHTCCEEEEEEEEECTTSCEEEEEEEEEESSSSSHH
T ss_pred CCCHHHHHCCCeEEEEEEEEEeCCCCEeEEEEEECCCchHHHH
Confidence 3567889999999987444555566677888888889998854
No 5
>d1efaa1 a.35.1.5 (A:2-60) Lac repressor (LacR), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=6.15 E-value=95 Score=19.77 Aligned_cols=17 Identities=29% Similarity=0.350 Sum_probs=12.6
Q ss_pred CCCChhHhhhhhhhccc
Q 027209 52 KPTSVPEVAKQRELSGS 68 (226)
Q Consensus 52 Kp~s~~EvAKqrELsGt 68 (226)
|++++.|||+..-+|-+
T Consensus 1 k~~Ti~diA~~agvS~s 17 (59)
T d1efaa1 1 KPVTLYDVAEYAGVSYQ 17 (59)
T ss_dssp CCCCHHHHHHTTTSCHH
T ss_pred CCCCHHHHHHHHCCCHH
Confidence 57888889887766543
No 6
>d1ayia_ a.28.2.1 (A:) ImmE7 protein (Im7) {Escherichia coli [TaxId: 562]}
Probab=5.41 E-value=63 Score=22.66 Aligned_cols=12 Identities=42% Similarity=0.398 Sum_probs=8.8
Q ss_pred EEeecCCCCccc
Q 027209 13 IVITEHPCAFIS 24 (226)
Q Consensus 13 ~~~~~~~~~~~~ 24 (226)
+-||+||++-.-
T Consensus 42 ~~iteHP~gsDL 53 (86)
T d1ayia_ 42 VKITEHPDGTDL 53 (86)
T ss_dssp HHHHCCTTTTHH
T ss_pred HHHHcCCCCCce
Confidence 458999998653
No 7
>d1v37a_ c.60.1.1 (A:) Alpha-ribazole-5'-phosphate phosphatase {Thermus thermophilus [TaxId: 274]}
Probab=5.25 E-value=91 Score=22.37 Aligned_cols=8 Identities=75% Similarity=1.360 Sum_probs=6.6
Q ss_pred cCCCCCCC
Q 027209 215 KPPGGESS 222 (226)
Q Consensus 215 kPPGGeSS 222 (226)
.||||||-
T Consensus 103 ~~p~gEs~ 110 (171)
T d1v37a_ 103 HPPGGESL 110 (171)
T ss_dssp CCTTSCCH
T ss_pred CCCCccch
Confidence 58999984
No 8
>d2vlqa1 a.28.2.1 (A:4-84) ImmE9 protein (Im9) {Escherichia coli [TaxId: 562]}
Probab=5.19 E-value=67 Score=22.27 Aligned_cols=11 Identities=36% Similarity=0.371 Sum_probs=8.1
Q ss_pred EeecCCCCccc
Q 027209 14 VITEHPCAFIS 24 (226)
Q Consensus 14 ~~~~~~~~~~~ 24 (226)
-||+||++-.-
T Consensus 39 ~iteHP~gsDL 49 (81)
T d2vlqa1 39 EMTEHPSGSDL 49 (81)
T ss_dssp HHHCCTTTTHH
T ss_pred HHccCCCCCce
Confidence 47999988543
No 9
>d1mhhe_ d.15.7.1 (E:) Immunoglobulin light chain-binding domain of protein L {Peptostreptococcus magnus [TaxId: 1260]}
Probab=5.06 E-value=50 Score=22.01 Aligned_cols=16 Identities=38% Similarity=0.733 Sum_probs=11.6
Q ss_pred CCCCCCCcccccccCC
Q 027209 196 SNIFADEKVESRDYFG 211 (226)
Q Consensus 196 sDIFADgK~~~Rd~~g 211 (226)
|=|||||+...-.+-|
T Consensus 7 NlifadG~tQtAeFkG 22 (63)
T d1mhhe_ 7 NLIFADGKIQTAEFKG 22 (63)
T ss_dssp EEECTTSCEEEEEEEE
T ss_pred EEEEcCCcEEEEEEee
Confidence 5599999987665543
No 10
>d1gxha_ a.28.2.1 (A:) ImmE8 (Im8) {Escherichia coli [TaxId: 562]}
Probab=4.93 E-value=78 Score=22.10 Aligned_cols=12 Identities=42% Similarity=0.493 Sum_probs=8.6
Q ss_pred EEeecCCCCccc
Q 027209 13 IVITEHPCAFIS 24 (226)
Q Consensus 13 ~~~~~~~~~~~~ 24 (226)
+-||+||++-.-
T Consensus 40 ~~iteHP~gsDL 51 (85)
T d1gxha_ 40 ISVTEHPSGSDL 51 (85)
T ss_dssp HHTTCCTTTTHH
T ss_pred HHhcCCCCCCce
Confidence 347999988543
Done!