BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 027210
         (226 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9C615|SYP24_ARATH Putative syntaxin-24 OS=Arabidopsis thaliana GN=SYP24 PE=3 SV=1
          Length = 416

 Score =  134 bits (337), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 70/146 (47%), Positives = 91/146 (62%), Gaps = 4/146 (2%)

Query: 69  NKVKFHVTDASLTEFNLTSNNNLNYKLALNITIRNPNKKIGVHYDRIEARVYYDDKRLTS 128
           N VKF V DA LT F+L SNNNL Y L+LN++IRN    IG+HYDR EA VYY ++RL +
Sbjct: 5   NDVKFQVYDAELTHFDLESNNNLQYSLSLNLSIRNSKSSIGIHYDRFEATVYYMNQRLGA 64

Query: 129 VPLTPFYQGHKNTSYLNPVFEGQQILL--GGALRDYNKENNAGVFSIDVKLKLKVRFKLG 186
           VP+  FY G KNT  L  +FEGQ ++L  G   + +  +   GV+ IDVKL +  R  + 
Sbjct: 65  VPMPLFYLGSKNTMLLRALFEGQTLVLLKGNERKKFEDDQKTGVYRIDVKLSINFRVMVL 124

Query: 187 KIKTPKFKPTIECDLKVP--LNSSNG 210
            + T   KP + C LK+P  L SSN 
Sbjct: 125 HLVTWPMKPVVRCHLKIPLALGSSNS 150


>sp|O48915|NDR1_ARATH Protein NDR1 OS=Arabidopsis thaliana GN=NDR1 PE=1 SV=1
          Length = 219

 Score = 48.9 bits (115), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 78/187 (41%), Gaps = 33/187 (17%)

Query: 30  GGGCGGCCCLFTLLIKIIVSAVLILGLAALIVWLIFRPINKVKFHVTDASLTEFNLTSNN 89
           G  C  CC          +S +   GL +L +WL  R  +K K  + +  +       N+
Sbjct: 11  GRNCCTCC----------LSFIFTAGLTSLFLWLSLRA-DKPKCSIQNFFIPALGKDPNS 59

Query: 90  NLNYKLALNITIRNPNKKIGVHYDRIEARVY-YDDKRLTSVPLT--------PFYQGHKN 140
             N  L   +   NPNK  G++YD +       +  ++ S  L          FYQGHK 
Sbjct: 60  RDNTTLNFMVRCDNPNKDKGIYYDDVHLNFSTINTTKINSSALVLVGNYTVPKFYQGHKK 119

Query: 141 TS----YLNPVFEGQQILLGGALRDYNKENNAGVFSIDVKLKLKVRFKLGKIKTPKFKPT 196
            +     + P+    Q +L   L      N + VF +D  LK +VRFK+   KT ++   
Sbjct: 120 KAKKWGQVKPL--NNQTVLRAVL-----PNGSAVFRLD--LKTQVRFKIVFWKTKRYGVE 170

Query: 197 IECDLKV 203
           +  D++V
Sbjct: 171 VGADVEV 177


>sp|Q8VZ13|Y1816_ARATH Uncharacterized protein At1g08160 OS=Arabidopsis thaliana
           GN=At1g08160 PE=2 SV=1
          Length = 221

 Score = 47.0 bits (110), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/127 (24%), Positives = 59/127 (46%), Gaps = 3/127 (2%)

Query: 60  IVWLIFRPINKVKFHVTDASLTEFNLTSNNN-LNYKLALNITIRNPNKKIGVHYDRIEAR 118
           I +L  RP  ++ + V  AS+ EF + +N++ +N K +  I   NP K + V Y  +   
Sbjct: 57  ITYLTLRP-KRLIYTVEAASVQEFAIGNNDDHINAKFSYVIKSYNPEKHVSVRYHSMRIS 115

Query: 119 VYYDDKRLTSVPLTPFYQGHKNTSYLNPVFEGQQILLGG-ALRDYNKENNAGVFSIDVKL 177
             + ++ +    ++PF Q  KN + +        + L     RD   E + G   ++V +
Sbjct: 116 TAHHNQSVAHKNISPFKQRPKNETRIETQLVSHNVALSKFNARDLRAEKSKGTIEMEVYI 175

Query: 178 KLKVRFK 184
             +V +K
Sbjct: 176 TARVSYK 182


>sp|Q91YN9|BAG2_MOUSE BAG family molecular chaperone regulator 2 OS=Mus musculus GN=Bag2
           PE=1 SV=1
          Length = 210

 Score = 32.0 bits (71), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 8/99 (8%)

Query: 74  HVTDASLTEFNLTSNNNLNYKLALNI---TIRNPNKKIGV-HYDRIEARV---YYDDKRL 126
            ++D    E NLT+N  +   L + +   TIRNP ++  + H  RI   V   + DD   
Sbjct: 71  QISDGEREELNLTANRLMGRTLTVEVSVETIRNPQQEESLKHATRIIDEVVSKFLDDLGN 130

Query: 127 TSVPLTPFYQGHKNTSYLNPVFEG-QQILLGGALRDYNK 164
               L   Y    +     PV +  Q I++G AL D  K
Sbjct: 131 AKSHLMSLYSACSSEVPPGPVDQKFQSIVIGCALEDQKK 169


>sp|O95816|BAG2_HUMAN BAG family molecular chaperone regulator 2 OS=Homo sapiens GN=BAG2
           PE=1 SV=1
          Length = 211

 Score = 32.0 bits (71), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 8/99 (8%)

Query: 74  HVTDASLTEFNLTSNNNLNYKLALNI---TIRNPNKKIGV-HYDRIEARV---YYDDKRL 126
            ++D    E NLT+N  +   L + +   TIRNP ++  + H  RI   V   + DD   
Sbjct: 71  QISDGEREELNLTANRLMGRTLTVEVSVETIRNPQQQESLKHATRIIDEVVNKFLDDLGN 130

Query: 127 TSVPLTPFYQGHKNTSYLNPVFEG-QQILLGGALRDYNK 164
               L   Y    +     PV +  Q I++G AL D  K
Sbjct: 131 AKSHLMSLYSACSSEVPHGPVDQKFQSIVIGCALEDQKK 169


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.323    0.141    0.435 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,769,658
Number of Sequences: 539616
Number of extensions: 3878569
Number of successful extensions: 9543
Number of sequences better than 100.0: 6
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 9539
Number of HSP's gapped (non-prelim): 8
length of query: 226
length of database: 191,569,459
effective HSP length: 113
effective length of query: 113
effective length of database: 130,592,851
effective search space: 14756992163
effective search space used: 14756992163
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)