BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027212
(226 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|118489544|gb|ABK96574.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 286
Score = 302 bits (773), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 153/216 (70%), Positives = 175/216 (81%), Gaps = 7/216 (3%)
Query: 11 MRSIFQLKSNPPKCLLFLPDSCHR---RAETATCRASSVSVRQWSSAANYSRL----VKL 63
+RSIFQ NPPK LL L S HR RA+ + SV WSS+ANYS L KL
Sbjct: 14 LRSIFQPNPNPPKALLSLTGSFHRGPHRAKVGYNSIGAASVSLWSSSANYSSLRNGSSKL 73
Query: 64 SNKPIVVRQLAHKRNGVVRCATIEEIEAEKSSIEKDVKARMERTIDMVRTNFNSVRTGRS 123
S KP+ V++L R GVVR ATIEEIEAEKS IE D K RME+TID +RTNFNSVRTGR+
Sbjct: 74 SGKPVAVKRLLQNRRGVVRNATIEEIEAEKSLIEDDAKGRMEKTIDTMRTNFNSVRTGRA 133
Query: 124 NPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPN 183
NP+MLDKIEVEYYG+PVSLKSIAQI+TPD+SSLL+QPYDKSSLK+IEKAIVSSDLG+TPN
Sbjct: 134 NPSMLDKIEVEYYGTPVSLKSIAQISTPDASSLLVQPYDKSSLKAIEKAIVSSDLGLTPN 193
Query: 184 NDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
NDGEVIR+++PQLTSERRKELSK+VAK AEEGKV +
Sbjct: 194 NDGEVIRMSIPQLTSERRKELSKMVAKLAEEGKVAL 229
>gi|224066503|ref|XP_002302112.1| predicted protein [Populus trichocarpa]
gi|222843838|gb|EEE81385.1| predicted protein [Populus trichocarpa]
Length = 286
Score = 299 bits (765), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 152/216 (70%), Positives = 174/216 (80%), Gaps = 7/216 (3%)
Query: 11 MRSIFQLKSNPPKCLLFLPDSCHR---RAETATCRASSVSVRQWSSAANYSRL----VKL 63
+RSIFQ NPPK LL L S HR RA+ + SV WSS+ANYS L KL
Sbjct: 14 LRSIFQPNPNPPKALLSLTGSFHRGPHRAKVCYNSIGATSVSLWSSSANYSSLRNGSTKL 73
Query: 64 SNKPIVVRQLAHKRNGVVRCATIEEIEAEKSSIEKDVKARMERTIDMVRTNFNSVRTGRS 123
S KP+ V++L R GVVR ATIEEIEAEKS IE D K RME+TID +R NFNSVRTGR+
Sbjct: 74 SGKPVAVKRLLQNRRGVVRNATIEEIEAEKSLIEDDAKGRMEKTIDTMRANFNSVRTGRA 133
Query: 124 NPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPN 183
NP+MLDKIEVEYYG+PVSLKSIAQI+TPD+SSLL+QPYDKSSLK+IEKAIVSSDLG+TPN
Sbjct: 134 NPSMLDKIEVEYYGTPVSLKSIAQISTPDASSLLVQPYDKSSLKAIEKAIVSSDLGLTPN 193
Query: 184 NDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
NDGEVIR+++PQLTSERRKELSK+VAK AEEGKV +
Sbjct: 194 NDGEVIRMSIPQLTSERRKELSKMVAKLAEEGKVAL 229
>gi|388497414|gb|AFK36773.1| unknown [Lotus japonicus]
Length = 231
Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 146/218 (66%), Positives = 172/218 (78%), Gaps = 13/218 (5%)
Query: 2 ATHFSSTGPMRSIFQLKSNPPKCLLFLPDSCHRRAETATCRASSVSVRQWSSAANYSRLV 61
AT FS P+RSIFQ NPPK LFLP+S + + SS+S SR +
Sbjct: 3 ATSFSPATPVRSIFQ---NPPKTTLFLPESFY------GVKRSSISASASYVTLKLSRTL 53
Query: 62 KLSNKPIVVRQLAHKRNGVVRCATIEEIEAEKSSIEKDVKARMERTIDMVRTNFNSVRTG 121
LS KPI L+H+R G+VR AT+EEIEAEK +IEKDV+ RME+TI+ VR+NFNS+RTG
Sbjct: 54 TLSAKPI----LSHRRMGIVRAATMEEIEAEKKAIEKDVRNRMEKTIENVRSNFNSIRTG 109
Query: 122 RSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMT 181
RSNP+MLDKIEVEYYG+P SLKSIAQI+ PD SSLL+QPYDKSSLK+IEKAIVSSDLGMT
Sbjct: 110 RSNPSMLDKIEVEYYGAPASLKSIAQISAPDGSSLLVQPYDKSSLKAIEKAIVSSDLGMT 169
Query: 182 PNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
PNNDGEVIRL++PQLTS+RRKELSKVV+KQ EEGKV +
Sbjct: 170 PNNDGEVIRLSIPQLTSDRRKELSKVVSKQTEEGKVAL 207
>gi|449444671|ref|XP_004140097.1| PREDICTED: ribosome-recycling factor, chloroplastic-like [Cucumis
sativus]
Length = 278
Score = 285 bits (730), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 155/224 (69%), Positives = 177/224 (79%), Gaps = 8/224 (3%)
Query: 1 MATHFSSTGPMR-SIFQLKSNPPKCLLFLPDSCHRRAETATCRASSVSVRQWSSAANYSR 59
MAT FS+T +R S+FQ + PPK LL L D + C + + + W SA+NY R
Sbjct: 1 MATPFSATASIRRSLFQ--NPPPKSLLSLRD-YNGGLNCVKCGSITAHLCSWKSASNYVR 57
Query: 60 LVK----LSNKPIVVRQLAHKRNGVVRCATIEEIEAEKSSIEKDVKARMERTIDMVRTNF 115
L + +S + V + R VVR ATIEEIEAEK+ IEKDVKARME+TID VR+NF
Sbjct: 58 LNRQALVISTQLSVSGNVFKNRRLVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSNF 117
Query: 116 NSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVS 175
NS+RTGRSNPAMLDKIEVEYYGSPVSLKSIAQI+TPD+SSLL+QPYDKSSLKSIEKAIV+
Sbjct: 118 NSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVN 177
Query: 176 SDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
SDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV +
Sbjct: 178 SDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAV 221
>gi|296085196|emb|CBI28691.3| unnamed protein product [Vitis vinifera]
Length = 274
Score = 281 bits (720), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 148/223 (66%), Positives = 172/223 (77%), Gaps = 10/223 (4%)
Query: 1 MATHFSSTGPMRSIFQLKS-NPPKCLLFLP--DSCHRRAETA-TCRASSVSVRQWSSAAN 56
MA FS P+R+IFQ KS +P C P + CH A T R+++ VR A
Sbjct: 1 MAMTFSPATPVRTIFQRKSLSPGGCYCRGPGYEKCHLNIGIAFTLRSAANYVRLGDGARE 60
Query: 57 YSRLVKLSNKPIVVRQLAHKRNGVVRCATIEEIEAEKSSIEKDVKARMERTIDMVRTNFN 116
YS K V ++ KR G+ RCATIEEIEAEKSSIEKDVK RME+TI+ VRTNFN
Sbjct: 61 YS------GKLFVAKRNFQKRTGIFRCATIEEIEAEKSSIEKDVKERMEKTIETVRTNFN 114
Query: 117 SVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSS 176
S+RTGR+NPA+LD++EVEYYG+PVSLKSIAQI+TPDS+SLL+QPYDKSSLK IEKAIVSS
Sbjct: 115 SIRTGRANPAILDRVEVEYYGTPVSLKSIAQISTPDSASLLVQPYDKSSLKVIEKAIVSS 174
Query: 177 DLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
DLG+TPNNDGEVIRL+LPQLTSERRKELSKVVAKQ EEGKV +
Sbjct: 175 DLGLTPNNDGEVIRLSLPQLTSERRKELSKVVAKQTEEGKVAL 217
>gi|147799481|emb|CAN77406.1| hypothetical protein VITISV_026196 [Vitis vinifera]
Length = 222
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 150/226 (66%), Positives = 175/226 (77%), Gaps = 16/226 (7%)
Query: 1 MATHFSSTGPMRSIFQLKS-NPPKCLLFLP--DSCHRRAETATCRASSVSVRQWSSAANY 57
MA FS P+R+IFQ KS +P C P + CH A ++R SAANY
Sbjct: 1 MAMTFSPATPVRTIFQRKSLSPGGCYCRGPGYEKCHLNIGIA------FTLR---SAANY 51
Query: 58 SRLV----KLSNKPIVVRQLAHKRNGVVRCATIEEIEAEKSSIEKDVKARMERTIDMVRT 113
RL + S K IV ++ KR G+ RCATIEEIEAEKSSIEKDVK RME+TI+ VRT
Sbjct: 52 XRLGDGAREYSGKLIVAKRNFQKRTGIFRCATIEEIEAEKSSIEKDVKERMEKTIETVRT 111
Query: 114 NFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAI 173
NFNS+RTGR+NPA+LD++EVEYYG+PVSLKSIAQI+TPDS+SLL+QPYDKSSLK IEKAI
Sbjct: 112 NFNSIRTGRANPAILDRVEVEYYGTPVSLKSIAQISTPDSASLLVQPYDKSSLKVIEKAI 171
Query: 174 VSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
VSSDLG+TPNNDGEVIRL+LPQLTSERRKELSKVVAKQ EEGK ++
Sbjct: 172 VSSDLGLTPNNDGEVIRLSLPQLTSERRKELSKVVAKQTEEGKGII 217
>gi|225437014|ref|XP_002272648.1| PREDICTED: ribosome-recycling factor, chloroplastic-like [Vitis
vinifera]
Length = 280
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 144/221 (65%), Positives = 172/221 (77%), Gaps = 6/221 (2%)
Query: 5 FSSTGPMRSIFQLKS-NPPKCLLFLP--DSCHRRAETA-TCRASSVSVRQWSSAANYSRL 60
FS P+R+IFQ KS +P C P + CH A T R+++ VR A YS
Sbjct: 3 FSPATPVRTIFQRKSLSPGGCYCRGPGYEKCHLNIGIAFTLRSAANYVRLGDGAREYSGK 62
Query: 61 VKLSNKPIVVRQLA--HKRNGVVRCATIEEIEAEKSSIEKDVKARMERTIDMVRTNFNSV 118
+ ++ + RQ+ + G+ RCATIEEIEAEKSSIEKDVK RME+TI+ VRTNFNS+
Sbjct: 63 LFVAKRNFQKRQVESYGYKTGIFRCATIEEIEAEKSSIEKDVKERMEKTIETVRTNFNSI 122
Query: 119 RTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDL 178
RTGR+NPA+LD++EVEYYG+PVSLKSIAQI+TPDS+SLL+QPYDKSSLK IEKAIVSSDL
Sbjct: 123 RTGRANPAILDRVEVEYYGTPVSLKSIAQISTPDSASLLVQPYDKSSLKVIEKAIVSSDL 182
Query: 179 GMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
G+TPNNDGEVIRL+LPQLTSERRKELSKVVAKQ EEGKV +
Sbjct: 183 GLTPNNDGEVIRLSLPQLTSERRKELSKVVAKQTEEGKVAL 223
>gi|356536011|ref|XP_003536534.1| PREDICTED: LOW QUALITY PROTEIN: ribosome-recycling factor,
chloroplastic-like [Glycine max]
Length = 256
Score = 273 bits (697), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 141/218 (64%), Positives = 168/218 (77%), Gaps = 22/218 (10%)
Query: 2 ATHFSSTGPMRSIFQLKSNPPKCLLFLPDSCHRRAETATCRASSVSVRQWSSAANYSRLV 61
+T FS T +RSI K NPPK LL L R ++S+A+Y+ L
Sbjct: 4 STSFSPTASVRSIIFQKQNPPKALLLLSQQ-----------------RSFASSASYATL- 45
Query: 62 KLSNKPIVVRQLAHKRNGVVRCATIEEIEAEKSSIEKDVKARMERTIDMVRTNFNSVRTG 121
KL +P+ L+ R +VR ATIEEIEAEK++IEKD K+RM+RTID VRTNF+S+RTG
Sbjct: 46 KLPRRPL----LSXGRTPLVRAATIEEIEAEKAAIEKDAKSRMDRTIDNVRTNFSSIRTG 101
Query: 122 RSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMT 181
R+NPAMLDKIEVEYYGSPVSLKSIAQI+TPD+SSLL+QPYDKSSLK+IEK IVSSDLGMT
Sbjct: 102 RANPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKAIEKTIVSSDLGMT 161
Query: 182 PNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
PNNDGE I+L +PQLTS+RRKELSK+VAKQAEEGKV +
Sbjct: 162 PNNDGESIQLRIPQLTSDRRKELSKIVAKQAEEGKVAL 199
>gi|297821238|ref|XP_002878502.1| hypothetical protein ARALYDRAFT_907901 [Arabidopsis lyrata subsp.
lyrata]
gi|297324340|gb|EFH54761.1| hypothetical protein ARALYDRAFT_907901 [Arabidopsis lyrata subsp.
lyrata]
Length = 275
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 143/224 (63%), Positives = 171/224 (76%), Gaps = 11/224 (4%)
Query: 1 MATHFSSTGPMRSIFQLKSNPPKCLLFLPDSCHRRAETATCR-----ASSVSVRQWSSAA 55
MA FSS P + Q ++N K +L LPDSC R +A C A S+ + A
Sbjct: 1 MAASFSSIAPTTPVLQFRANYSKSILSLPDSCLRIISSARCPSARLIACSLKTEKLPLGA 60
Query: 56 NYSRLVKLSNKPIVVRQLAHKRNGVVRCATIEEIEAEKSSIEKDVKARMERTIDMVRTNF 115
V LS P+V R L ++ V+R ATIEEIEAEKS+IE DVK++ME+TI+ +RT+F
Sbjct: 61 G----VNLSGGPVVKRSL--QKRLVIRSATIEEIEAEKSAIETDVKSKMEKTIETLRTSF 114
Query: 116 NSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVS 175
NS+RTGRSN AMLDKIEVEYYGSPVSLKSIAQI+TPD SSLL+QPYDKSSLK+IEKAIV+
Sbjct: 115 NSIRTGRSNAAMLDKIEVEYYGSPVSLKSIAQISTPDGSSLLLQPYDKSSLKAIEKAIVN 174
Query: 176 SDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
SDLG+TPNNDG+VIRL+LP LTSERRKELSKVVAKQ+EEGKV +
Sbjct: 175 SDLGVTPNNDGDVIRLSLPPLTSERRKELSKVVAKQSEEGKVAL 218
>gi|18412657|ref|NP_567141.1| ribosome-recycling factor [Arabidopsis thaliana]
gi|22001953|sp|Q9M1X0.2|RRFC_ARATH RecName: Full=Ribosome-recycling factor, chloroplastic; Short=RRF;
AltName: Full=CpFrr; AltName: Full=RRFHCP; AltName:
Full=Ribosome-releasing factor, chloroplastic; Flags:
Precursor
gi|13926252|gb|AAK49599.1|AF372883_1 AT3g63190/F16M2_40 [Arabidopsis thaliana]
gi|15982709|gb|AAL09724.1| AT3g63190/F16M2_40 [Arabidopsis thaliana]
gi|20260166|gb|AAM12981.1| putative protein [Arabidopsis thaliana]
gi|27363350|gb|AAO11594.1| At3g63190/F16M2_40 [Arabidopsis thaliana]
gi|332646925|gb|AEE80446.1| ribosome-recycling factor [Arabidopsis thaliana]
Length = 275
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 143/224 (63%), Positives = 173/224 (77%), Gaps = 11/224 (4%)
Query: 1 MATHFSSTGPMRSIFQLKSNPPKCLLFLPDSCHRRAETATCRASSVSVRQWSSAANYSRL 60
MA FSST P + + ++N K LL LPDSC R +A S S R + + +L
Sbjct: 1 MAASFSSTAPTTPVLRFRANYSKPLLSLPDSCLRIISSAI----SPSTRLIACSFKTDKL 56
Query: 61 -----VKLSNKPIVVRQLAHKRNGVVRCATIEEIEAEKSSIEKDVKARMERTIDMVRTNF 115
V LS P+V R L ++ V+R ATIEEIEAEKS+IE DVK++ME+TI+ +RT+F
Sbjct: 57 PLGAGVNLSGGPVVKRSL--QKRLVIRSATIEEIEAEKSAIETDVKSKMEKTIETLRTSF 114
Query: 116 NSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVS 175
NS+RTGRSN AMLDKIEVEYYGSPVSLKSIAQI+TPD SSLL+QPYDKSSLK+IEKAIV+
Sbjct: 115 NSIRTGRSNAAMLDKIEVEYYGSPVSLKSIAQISTPDGSSLLLQPYDKSSLKAIEKAIVN 174
Query: 176 SDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
SDLG+TPNNDG+VIRL+LP LTS+RRKELSKVVAKQ+EEGKV +
Sbjct: 175 SDLGVTPNNDGDVIRLSLPPLTSDRRKELSKVVAKQSEEGKVAL 218
>gi|357440723|ref|XP_003590639.1| Ribosome-recycling factor [Medicago truncatula]
gi|217072182|gb|ACJ84451.1| unknown [Medicago truncatula]
gi|217072782|gb|ACJ84751.1| unknown [Medicago truncatula]
gi|355479687|gb|AES60890.1| Ribosome-recycling factor [Medicago truncatula]
Length = 262
Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 138/219 (63%), Positives = 169/219 (77%), Gaps = 14/219 (6%)
Query: 1 MATHFSSTGPMRSIFQLKSNPPKCLLFLPDSCHRRAETATCRASSVSVRQWSSAANYSRL 60
MAT FSST P+RSIFQ PK LL S H + R+S+ + S + +S
Sbjct: 1 MATSFSSTTPLRSIFQNLPIVPKALL----SAH--SSFTIKRSSTYVTLKLSGSGRHS-- 52
Query: 61 VKLSNKPIVVRQLAHKRNGVVRCATIEEIEAEKSSIEKDVKARMERTIDMVRTNFNSVRT 120
LS + + H R G VR ATIEEIEAEK+SIE DVK+RMERT+D V+TNF+S+RT
Sbjct: 53 --LSKGLLTL----HTRKGFVRAATIEEIEAEKASIENDVKSRMERTLDNVKTNFSSIRT 106
Query: 121 GRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGM 180
GR+ P+MLDKIEVEYYGSPVSLK+IAQI+TPD+SSLL+ PYDKSSLK+IEKAIV+SD+GM
Sbjct: 107 GRATPSMLDKIEVEYYGSPVSLKTIAQISTPDASSLLVSPYDKSSLKAIEKAIVNSDVGM 166
Query: 181 TPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
TPNNDGEVIRL++PQLTS+RRKEL+K+V+KQ EEGKV +
Sbjct: 167 TPNNDGEVIRLSIPQLTSDRRKELTKIVSKQVEEGKVAL 205
>gi|388499912|gb|AFK38022.1| unknown [Medicago truncatula]
Length = 262
Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 138/219 (63%), Positives = 169/219 (77%), Gaps = 14/219 (6%)
Query: 1 MATHFSSTGPMRSIFQLKSNPPKCLLFLPDSCHRRAETATCRASSVSVRQWSSAANYSRL 60
MAT FSST P+RSIFQ PK LL S H + R+S+ + S + +S
Sbjct: 1 MATSFSSTTPLRSIFQNLPVVPKALL----SAH--SSFTIKRSSTYVTLKLSGSGRHS-- 52
Query: 61 VKLSNKPIVVRQLAHKRNGVVRCATIEEIEAEKSSIEKDVKARMERTIDMVRTNFNSVRT 120
LS + + H R G VR ATIEEIEAEK+SIE DVK+RMERT+D V+TNF+S+RT
Sbjct: 53 --LSKGLLTL----HTRKGFVRAATIEEIEAEKASIENDVKSRMERTLDNVKTNFSSIRT 106
Query: 121 GRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGM 180
GR+ P+MLDKIEVEYYGSPVSLK+IAQI+TPD+SSLL+ PYDKSSLK+IEKAIV+SD+GM
Sbjct: 107 GRATPSMLDKIEVEYYGSPVSLKTIAQISTPDASSLLVSPYDKSSLKAIEKAIVNSDVGM 166
Query: 181 TPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
TPNNDGEVIRL++PQLTS+RRKEL+K+V+KQ EEGKV +
Sbjct: 167 TPNNDGEVIRLSIPQLTSDRRKELTKIVSKQVEEGKVAL 205
>gi|359806687|ref|NP_001241288.1| uncharacterized protein LOC100794560 [Glycine max]
gi|255638439|gb|ACU19529.1| unknown [Glycine max]
Length = 261
Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 140/225 (62%), Positives = 169/225 (75%), Gaps = 27/225 (12%)
Query: 1 MATHFSSTGPMRSI-FQLKSNPPKCLLFLPDSCHRRAETATCRASSVSVRQWSSAANYS- 58
MAT FS T + SI FQ NPPK + R ++S+A+Y+
Sbjct: 1 MATSFSPTASVGSIIFQ---NPPKG--------------LLLLSQQQQQRSFASSASYAT 43
Query: 59 ----RLVKLSNKPIVVRQLAHKRNGVVRCATIEEIEAEKSSIEKDVKARMERTIDMVRTN 114
R LS +P+ L+ R +VR ATIEEIEAEK++IEKD K RM+RTID VRTN
Sbjct: 44 LKLPRAFALSPRPL----LSKGRTTLVRAATIEEIEAEKAAIEKDAKTRMDRTIDNVRTN 99
Query: 115 FNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIV 174
F+S+RTGR+NP+MLDKI+VEYYGSPVSLKSIAQI+TPD+SSLL+QPYDKSSLK+IEKAIV
Sbjct: 100 FSSIRTGRANPSMLDKIQVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKAIEKAIV 159
Query: 175 SSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
SSDLGMTPNNDGE+IRL++PQLTS+RRKELSK+VAKQAEEGKV +
Sbjct: 160 SSDLGMTPNNDGELIRLSIPQLTSDRRKELSKIVAKQAEEGKVAL 204
>gi|449489766|ref|XP_004158409.1| PREDICTED: ribosome-recycling factor, chloroplastic-like [Cucumis
sativus]
Length = 270
Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 143/217 (65%), Positives = 166/217 (76%), Gaps = 9/217 (4%)
Query: 1 MATHFSSTGPMR-SIFQLKSNPPKCLLFLPDSCHRRAETATCRASSVSVRQWSSAANYSR 59
MAT FS+T +R S+FQ + PPK LL L D + C + + + W SA+NY R
Sbjct: 1 MATPFSATASIRRSLFQ--NPPPKSLLSLRDY-NGGLNCVKCGSITAHLCSWKSASNYVR 57
Query: 60 LVK----LSNKPIVVRQLAHKRNGVVRCATIEEIEAEKSSIEKDVKARMERTIDMVRTNF 115
L + +S + V + R VVR ATIEEIEAEK+ IEKDVKARME+TID VR+NF
Sbjct: 58 LNRQALVISTQLSVSGNVFKNRRLVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSNF 117
Query: 116 NSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVS 175
NS+RTGRSNPAMLDKIEVEYYGSPVSLKSIAQI+TPD+SSLL+QPYDKSSLKSIEKAIV+
Sbjct: 118 NSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVN 177
Query: 176 SDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQA 212
SDLGMTPNNDGEVIRLTLPQLTSERRK V+ K+A
Sbjct: 178 SDLGMTPNNDGEVIRLTLPQLTSERRKS-DHVIVKEA 213
>gi|11277801|pir||T48108 hypothetical protein F16M2.40 - Arabidopsis thaliana
gi|7523401|emb|CAB86420.1| putative protein [Arabidopsis thaliana]
Length = 289
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 141/236 (59%), Positives = 172/236 (72%), Gaps = 21/236 (8%)
Query: 1 MATHFSSTGPMRSIFQLKSNPPKCLLFLPDSCHRRAETATCRASSVSVRQWSSAANYSRL 60
MA FSST P + + ++N K LL LPDSC R +A S S R + + +L
Sbjct: 1 MAASFSSTAPTTPVLRFRANYSKPLLSLPDSCLRIISSAI----SPSTRLIACSFKTDKL 56
Query: 61 -----VKLSNKPIVVRQLAHKR------NGVVRCATIEEIEAEKSSIEKDVKARMERTID 109
V LS P+V R L ++ V+R ATIEEIEAEKS+IE DVK++ME+TI+
Sbjct: 57 PLGAGVNLSGGPVVKRSLQKRQVPLMIWELVIRSATIEEIEAEKSAIETDVKSKMEKTIE 116
Query: 110 MVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKS----- 164
+RT+FNS+RTGRSN AMLDKIEVEYYGSPVSLKSIAQI+TPD SSLL+QPYDKS
Sbjct: 117 TLRTSFNSIRTGRSNAAMLDKIEVEYYGSPVSLKSIAQISTPDGSSLLLQPYDKSRYMTN 176
Query: 165 -SLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
+L +IEKAIV+SDLG+TPNNDG+VIRL+LP LTS+RRKELSKVVAKQ+EEGKV +
Sbjct: 177 GALMAIEKAIVNSDLGVTPNNDGDVIRLSLPPLTSDRRKELSKVVAKQSEEGKVAL 232
>gi|255559434|ref|XP_002520737.1| ribosome recycling factor, putative [Ricinus communis]
gi|223540122|gb|EEF41699.1| ribosome recycling factor, putative [Ricinus communis]
Length = 247
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 137/219 (62%), Positives = 160/219 (73%), Gaps = 14/219 (6%)
Query: 1 MATHFSSTGPMRSIFQLKSNPPKCLLFLPDSCHRRAETATCRASSVSVRQWSSAANYSRL 60
MAT FSS +++ L P C L + T S + + N+
Sbjct: 1 MATQFSSKPSFKTLLSL----PACHTVL-----KIIPTVPVCVSGTRLLATPAPPNFPAN 51
Query: 61 VKLSNKPIVVRQLAHKRNGVVRCATIEEIEAEKSSIEKDVKARMERTIDMVRTNFNSVRT 120
LSN + G VRCATIEEIEAEKSSIEKD KARME+TI+ VRTNFNS+RT
Sbjct: 52 RSLSNT-----WCKRGKRGFVRCATIEEIEAEKSSIEKDAKARMEKTIETVRTNFNSIRT 106
Query: 121 GRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGM 180
GR+NP+MLDKIEVEYYG+PVSLKSIAQI+TPD+SSLL+QPYDKSSLKSIEKAIVSSDLG+
Sbjct: 107 GRANPSMLDKIEVEYYGTPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVSSDLGL 166
Query: 181 TPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
TPNNDGEVIRL++PQLTSERRKE+SK+VAK AEEGKV +
Sbjct: 167 TPNNDGEVIRLSIPQLTSERRKEMSKMVAKLAEEGKVAL 205
>gi|7404451|sp|P37706.2|RRFC_DAUCA RecName: Full=Ribosome-recycling factor, chloroplastic; Short=RRF;
AltName: Full=Nuclear located protein D2; AltName:
Full=Ribosome-releasing factor, chloroplastic; Flags:
Precursor
Length = 227
Score = 246 bits (627), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 119/173 (68%), Positives = 147/173 (84%), Gaps = 7/173 (4%)
Query: 51 WSSAANYSRLV----KLSNKPIVVRQLAHKRNGVVRCATIEEIEAEKSSIEKDVKARMER 106
W++AANY ++ K + K +V L+ KR G ++CAT+EEIEAEKS IEK VK RME+
Sbjct: 1 WTAAANYVKIKVGTGKFARKTVV---LSQKRTGTLKCATMEEIEAEKSLIEKSVKERMEK 57
Query: 107 TIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSL 166
TI+ V+ +FNS+RT RSNP MLDKI+VEYYG+P SLKSIAQI+TPDSSSLL+ PYDKSSL
Sbjct: 58 TIENVKASFNSIRTXRSNPDMLDKIKVEYYGTPTSLKSIAQISTPDSSSLLVNPYDKSSL 117
Query: 167 KSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
K IEKAIV+SDLG+TPNNDG+VIRL++PQLT++RRKELSK+VAKQAEEGKV +
Sbjct: 118 KDIEKAIVNSDLGITPNNDGDVIRLSIPQLTADRRKELSKIVAKQAEEGKVAL 170
>gi|7388105|sp|P82231.1|RRFC_SPIOL RecName: Full=Ribosome-recycling factor, chloroplastic; Short=RRF;
AltName: Full=CpFrr; AltName: Full=RRFHCP; AltName:
Full=Ribosome-releasing factor, chloroplastic; Flags:
Precursor
gi|4689034|emb|CAB41419.1| chloroplast ribosome recycling factor protein [Spinacia oleracea]
Length = 271
Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 121/183 (66%), Positives = 150/183 (81%), Gaps = 5/183 (2%)
Query: 41 CRASSVSVRQWSSAANYSRL----VKLSNKPIVVRQLAHKRNGVVRCATIEEIEAEKSSI 96
C + +V W S+ANY R+ K S K +VV+QL + R G RCAT+EE+EAEKS I
Sbjct: 33 CNIARTNVSVWRSSANYVRMDCGVKKFSGKAVVVKQLQN-RAGTFRCATMEEVEAEKSLI 91
Query: 97 EKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSL 156
E + K RME+TI+ +R+NFNSVRT R++P MLD+IEVEYYG+PVSLKSIAQI+TPD+SSL
Sbjct: 92 ETNTKQRMEKTIETIRSNFNSVRTNRASPTMLDRIEVEYYGTPVSLKSIAQISTPDASSL 151
Query: 157 LIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGK 216
LI PYDKSSLK+IEKAIV+S LG++PNNDGEVIRL+LP LTS+RRKEL+KVV+K AEEGK
Sbjct: 152 LISPYDKSSLKAIEKAIVTSQLGVSPNNDGEVIRLSLPPLTSDRRKELAKVVSKLAEEGK 211
Query: 217 VVM 219
V +
Sbjct: 212 VAV 214
>gi|116792732|gb|ABK26473.1| unknown [Picea sitchensis]
Length = 279
Score = 219 bits (558), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 103/151 (68%), Positives = 128/151 (84%), Gaps = 4/151 (2%)
Query: 73 LAHK----RNGVVRCATIEEIEAEKSSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAML 128
+HK R GV RCATIEEIEAEK IE+D RME+T++ ++TNFNS+RTGR++PA L
Sbjct: 72 FSHKERNVRTGVCRCATIEEIEAEKQLIEEDAIERMEKTLETIKTNFNSIRTGRASPAFL 131
Query: 129 DKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEV 188
D++EVEYYGSPV+LKS+AQ++ PD +LL+QPYDKSSLKSIEKAI S+LG+TP+NDG V
Sbjct: 132 DRVEVEYYGSPVNLKSLAQVSVPDGGTLLVQPYDKSSLKSIEKAISKSNLGLTPSNDGNV 191
Query: 189 IRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
IRL++PQLTSERRKEL KVVAK AEEGK+ +
Sbjct: 192 IRLSIPQLTSERRKELLKVVAKIAEEGKIAI 222
>gi|115472897|ref|NP_001060047.1| Os07g0570700 [Oryza sativa Japonica Group]
gi|158513666|sp|A2YMU2.2|RRFC_ORYSI RecName: Full=Ribosome-recycling factor, chloroplastic; Short=RRF;
AltName: Full=Protein OsL8; AltName:
Full=Ribosome-releasing factor, chloroplastic; Flags:
Precursor
gi|158513703|sp|A3BLC3.2|RRFC_ORYSJ RecName: Full=Ribosome-recycling factor, chloroplastic; Short=RRF;
AltName: Full=Protein OsL8; AltName:
Full=Ribosome-releasing factor, chloroplastic; Flags:
Precursor
gi|34394208|dbj|BAC84660.1| putative Ribosome recycling factor, chloroplast precursor [Oryza
sativa Japonica Group]
gi|113611583|dbj|BAF21961.1| Os07g0570700 [Oryza sativa Japonica Group]
gi|218199871|gb|EEC82298.1| hypothetical protein OsI_26546 [Oryza sativa Indica Group]
gi|222637311|gb|EEE67443.1| hypothetical protein OsJ_24808 [Oryza sativa Japonica Group]
Length = 266
Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 111/173 (64%), Positives = 143/173 (82%), Gaps = 6/173 (3%)
Query: 51 WSSAANYSRL----VKLSNKPIVVRQLAHKRNGVVRCATIEEIEAEKSSIEKDVKARMER 106
SS+ N+ L ++ ++P+++ Q + KR V+R ATIEEIEAEKS IE + RME+
Sbjct: 39 LSSSTNFMSLRAGPMRFYSRPLIL-QNSDKR-AVLRHATIEEIEAEKSVIEDQARERMEK 96
Query: 107 TIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSL 166
I+ V+ NFN+VRTGR+NPAMLD+IEVEYYG+PV+LKSIAQINTPD++SLLIQPYDKSSL
Sbjct: 97 AIETVQNNFNTVRTGRANPAMLDRIEVEYYGTPVNLKSIAQINTPDATSLLIQPYDKSSL 156
Query: 167 KSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
K IEK IV+++LG+TP+NDGEVIR+T+P LTS+RRKEL+K VAK AEEGKV +
Sbjct: 157 KLIEKTIVAANLGVTPSNDGEVIRVTVPPLTSDRRKELAKTVAKLAEEGKVAI 209
>gi|242080283|ref|XP_002444910.1| hypothetical protein SORBIDRAFT_07g001230 [Sorghum bicolor]
gi|241941260|gb|EES14405.1| hypothetical protein SORBIDRAFT_07g001230 [Sorghum bicolor]
Length = 265
Score = 217 bits (553), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 108/171 (63%), Positives = 140/171 (81%), Gaps = 6/171 (3%)
Query: 53 SAANYSRL----VKLSNKPIVVRQLAHKRNGVVRCATIEEIEAEKSSIEKDVKARMERTI 108
S+ N++RL V +P+V+R + V+ ATIEEIEAEKS IE K +ME+ I
Sbjct: 40 SSINFARLRAGPVDFGGRPLVLRH--SDKRAVLMHATIEEIEAEKSLIEDQAKEKMEKAI 97
Query: 109 DMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKS 168
+ V+TNFN+VRTGR+NPAMLD+IEVEYYG+PV+LKSIAQI+TPD++SLLIQPYDKSSLK
Sbjct: 98 ETVQTNFNTVRTGRANPAMLDRIEVEYYGTPVNLKSIAQISTPDATSLLIQPYDKSSLKL 157
Query: 169 IEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
IEK IV+++LG+TP+NDGEVIR+T+P LTS+RRKEL+K VAK +E+GKV +
Sbjct: 158 IEKTIVAANLGVTPSNDGEVIRVTVPPLTSDRRKELAKTVAKLSEDGKVAI 208
>gi|357122371|ref|XP_003562889.1| PREDICTED: ribosome-recycling factor, chloroplastic-like
[Brachypodium distachyon]
Length = 266
Score = 215 bits (548), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 106/163 (65%), Positives = 138/163 (84%), Gaps = 2/163 (1%)
Query: 57 YSRLVKLSNKPIVVRQLAHKRNGVVRCATIEEIEAEKSSIEKDVKARMERTIDMVRTNFN 116
+S V + P+V+ Q + KR V+R ATIEEIEAEK+ IE K +ME+ I+ V+TNFN
Sbjct: 49 HSGAVGFFSAPLVI-QYSDKR-AVLRHATIEEIEAEKTIIEDQAKEKMEKAIETVQTNFN 106
Query: 117 SVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSS 176
+VRTGR+NPAMLD+IEVEYYG+PV+LKSIAQINTPD++SLLIQPYDK+ LK IEKAIV++
Sbjct: 107 TVRTGRANPAMLDRIEVEYYGTPVNLKSIAQINTPDATSLLIQPYDKTCLKLIEKAIVAA 166
Query: 177 DLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
++G+TP+NDGEVIR+T+P LTS+RRKE++K VAK +EEGKV +
Sbjct: 167 NIGVTPSNDGEVIRVTVPPLTSDRRKEMTKTVAKLSEEGKVAI 209
>gi|219362787|ref|NP_001137010.1| hypothetical protein [Zea mays]
gi|194697972|gb|ACF83070.1| unknown [Zea mays]
gi|223972995|gb|ACN30685.1| unknown [Zea mays]
gi|413941645|gb|AFW74294.1| hypothetical protein ZEAMMB73_186637 [Zea mays]
gi|413941646|gb|AFW74295.1| hypothetical protein ZEAMMB73_186637 [Zea mays]
Length = 266
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 109/172 (63%), Positives = 141/172 (81%), Gaps = 7/172 (4%)
Query: 53 SAANYSRLVKLSNKPI--VVRQL--AH-KRNGVVRCATIEEIEAEKSSIEKDVKARMERT 107
S+ N++R KL + P+ R+L H + V+ ATIEEIEAEKS IE K +ME+
Sbjct: 40 SSTNFAR--KLQDGPVDFAARRLVLGHSDKRAVLTHATIEEIEAEKSLIEDQAKEKMEKA 97
Query: 108 IDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLK 167
I+ V+TNFN+VRTGR++PAMLD+IEVEYYG+PV+LKSIAQI+TPD++SLLIQPYDKSSLK
Sbjct: 98 IETVQTNFNTVRTGRASPAMLDRIEVEYYGTPVNLKSIAQISTPDATSLLIQPYDKSSLK 157
Query: 168 SIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
IEK IV+++LG+TP+NDGEVIR+T+P LTS+RRKEL+K VAK AE+GKV +
Sbjct: 158 LIEKTIVAANLGVTPSNDGEVIRVTVPPLTSDRRKELAKTVAKLAEDGKVAI 209
>gi|224034227|gb|ACN36189.1| unknown [Zea mays]
gi|413921479|gb|AFW61411.1| ribosome recycling factor [Zea mays]
Length = 264
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 104/159 (65%), Positives = 133/159 (83%), Gaps = 2/159 (1%)
Query: 61 VKLSNKPIVVRQLAHKRNGVVRCATIEEIEAEKSSIEKDVKARMERTIDMVRTNFNSVRT 120
V + +P+V+ + + V+ ATIEEIEAEKS IE K +ME+ I+ V+ NFN+VRT
Sbjct: 51 VDFAGRPLVLGR--SDKRAVLMHATIEEIEAEKSLIEDQAKEKMEKAIETVQANFNTVRT 108
Query: 121 GRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGM 180
GR+NPAMLD+IEVEYYG+PV+LKSIAQI+TPD++SLLIQPYDKSSLK IEK IV+++LG+
Sbjct: 109 GRANPAMLDRIEVEYYGTPVNLKSIAQISTPDATSLLIQPYDKSSLKLIEKTIVAANLGV 168
Query: 181 TPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
TP+NDGEVIR+T+P LTS+RRKELSK VAK AE+GKV +
Sbjct: 169 TPSNDGEVIRVTVPPLTSDRRKELSKTVAKLAEDGKVAI 207
>gi|226497262|ref|NP_001150478.1| ribosome recycling factor [Zea mays]
gi|195639534|gb|ACG39235.1| ribosome recycling factor [Zea mays]
Length = 264
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 104/159 (65%), Positives = 133/159 (83%), Gaps = 2/159 (1%)
Query: 61 VKLSNKPIVVRQLAHKRNGVVRCATIEEIEAEKSSIEKDVKARMERTIDMVRTNFNSVRT 120
V + +P+V+ + + V+ ATIEEIEAEKS IE K +ME+ I+ V+ NFN+VRT
Sbjct: 51 VDFAGRPLVLGR--SDKRAVLMHATIEEIEAEKSLIEDQAKEKMEKAIETVQANFNTVRT 108
Query: 121 GRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGM 180
GR+NPAMLD+IEVEYYG+PV+LKSIAQI+TPD++SLLIQPYDKSSLK IEK IV+++LG+
Sbjct: 109 GRANPAMLDRIEVEYYGTPVNLKSIAQISTPDATSLLIQPYDKSSLKLIEKTIVAANLGV 168
Query: 181 TPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
TP+NDGEVIR+T+P LTS+RRKELSK VAK AE+GKV +
Sbjct: 169 TPSNDGEVIRVTVPPLTSDRRKELSKTVAKLAEDGKVAI 207
>gi|413921480|gb|AFW61412.1| hypothetical protein ZEAMMB73_873979 [Zea mays]
Length = 195
Score = 209 bits (531), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 100/136 (73%), Positives = 122/136 (89%)
Query: 84 ATIEEIEAEKSSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLK 143
ATIEEIEAEKS IE K +ME+ I+ V+ NFN+VRTGR+NPAMLD+IEVEYYG+PV+LK
Sbjct: 3 ATIEEIEAEKSLIEDQAKEKMEKAIETVQANFNTVRTGRANPAMLDRIEVEYYGTPVNLK 62
Query: 144 SIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKE 203
SIAQI+TPD++SLLIQPYDKSSLK IEK IV+++LG+TP+NDGEVIR+T+P LTS+RRKE
Sbjct: 63 SIAQISTPDATSLLIQPYDKSSLKLIEKTIVAANLGVTPSNDGEVIRVTVPPLTSDRRKE 122
Query: 204 LSKVVAKQAEEGKVVM 219
LSK VAK AE+GKV +
Sbjct: 123 LSKTVAKLAEDGKVAI 138
>gi|326490946|dbj|BAJ90140.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326512904|dbj|BAK03359.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 266
Score = 203 bits (517), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 98/153 (64%), Positives = 133/153 (86%), Gaps = 2/153 (1%)
Query: 67 PIVVRQLAHKRNGVVRCATIEEIEAEKSSIEKDVKARMERTIDMVRTNFNSVRTGRSNPA 126
P+V+ Q + KR V+R AT EEIE EK+ +E+ K +ME+ I+ V++NFN+VRTGR+NP+
Sbjct: 59 PLVL-QHSDKR-AVLRHATNEEIEEEKTIVEEQAKEKMEKAIETVQSNFNTVRTGRANPS 116
Query: 127 MLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDG 186
MLD+IEVEYYG+PV+LK+IAQ+NTPD++SLLIQPYDKS LK IEKAIV++++G+TP+NDG
Sbjct: 117 MLDRIEVEYYGTPVNLKTIAQVNTPDATSLLIQPYDKSCLKLIEKAIVAANIGVTPSNDG 176
Query: 187 EVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
EVIR+T+P LTS+RRKE++K VAK +EEGKV +
Sbjct: 177 EVIRVTVPPLTSDRRKEMTKTVAKLSEEGKVAI 209
>gi|302762955|ref|XP_002964899.1| hypothetical protein SELMODRAFT_83448 [Selaginella moellendorffii]
gi|302809577|ref|XP_002986481.1| hypothetical protein SELMODRAFT_124362 [Selaginella moellendorffii]
gi|300145664|gb|EFJ12338.1| hypothetical protein SELMODRAFT_124362 [Selaginella moellendorffii]
gi|300167132|gb|EFJ33737.1| hypothetical protein SELMODRAFT_83448 [Selaginella moellendorffii]
Length = 192
Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 89/139 (64%), Positives = 120/139 (86%)
Query: 81 VRCATIEEIEAEKSSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPV 140
VR AT+E+IEAEK +E+D RME+TI+ V++NFN++RTGR++PA+LD++EVEYYG+ V
Sbjct: 1 VRAATVEDIEAEKQLVEEDAMERMEKTIETVKSNFNTIRTGRASPALLDRVEVEYYGTLV 60
Query: 141 SLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSER 200
LK+IAQI+TPD S++L+QP+D+SSL +I+KAI SDLG+TP+NDG VIRL +PQLT+ER
Sbjct: 61 LLKTIAQISTPDGSTILVQPFDRSSLSAIDKAITKSDLGLTPSNDGIVIRLNIPQLTAER 120
Query: 201 RKELSKVVAKQAEEGKVVM 219
RKEL K+VAK EEGKV +
Sbjct: 121 RKELLKLVAKLTEEGKVAL 139
>gi|168045141|ref|XP_001775037.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673624|gb|EDQ60144.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 264
Score = 186 bits (473), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 86/143 (60%), Positives = 118/143 (82%)
Query: 77 RNGVVRCATIEEIEAEKSSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYY 136
R+ V+R AT E++EAEK IE D RME++++ + +FN+VRTGR+ P++LD+++VEYY
Sbjct: 65 RSPVIRGATTEDVEAEKELIEMDAMERMEKSLEATKASFNTVRTGRATPSLLDRVQVEYY 124
Query: 137 GSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQL 196
G+ V LKSIAQI TPD S++LI P+DKSSL SIEK++V SD+G+TPNNDG VIRL +PQL
Sbjct: 125 GTNVILKSIAQITTPDGSTILITPFDKSSLTSIEKSLVKSDIGITPNNDGNVIRLNVPQL 184
Query: 197 TSERRKELSKVVAKQAEEGKVVM 219
T++RRKEL K+V+K +EEGKV +
Sbjct: 185 TADRRKELLKLVSKLSEEGKVAI 207
>gi|116792122|gb|ABK26242.1| unknown [Picea sitchensis]
Length = 173
Score = 183 bits (464), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 82/116 (70%), Positives = 105/116 (90%)
Query: 104 MERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDK 163
ME+T++ ++TNFNS+RTGR++PA LD++EVEYYGSPV+LKS+AQ++ PD +LL+QPYDK
Sbjct: 1 MEKTLETIKTNFNSIRTGRASPAFLDRVEVEYYGSPVNLKSLAQVSVPDGGTLLVQPYDK 60
Query: 164 SSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
SSLKSIEKAI S+LG+TP+NDG VIRL++PQLTSERRKEL KVVAK AEEGK+ +
Sbjct: 61 SSLKSIEKAISKSNLGLTPSNDGNVIRLSIPQLTSERRKELLKVVAKIAEEGKIAI 116
>gi|297891|emb|CAA51077.1| nuclear located protein [Daucus carota]
Length = 167
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 80/98 (81%), Positives = 93/98 (94%)
Query: 122 RSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMT 181
RSNP MLDKI+VEYYG+P SLKSIAQI+TPDSSSLL+ PYDKSSLK IEKAIV+SDLG+T
Sbjct: 13 RSNPDMLDKIKVEYYGTPTSLKSIAQISTPDSSSLLVNPYDKSSLKDIEKAIVNSDLGIT 72
Query: 182 PNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
PNNDG+VIRL++PQLT++RRKELSK+VAKQAEEGKV +
Sbjct: 73 PNNDGDVIRLSIPQLTADRRKELSKIVAKQAEEGKVAL 110
>gi|428218435|ref|YP_007102900.1| ribosome recycling factor [Pseudanabaena sp. PCC 7367]
gi|427990217|gb|AFY70472.1| ribosome recycling factor [Pseudanabaena sp. PCC 7367]
Length = 182
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 74/121 (61%), Positives = 100/121 (82%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+V+ +M++ ID ++NFN+VRTGR++ ++LD+I VEYYG P LKS+A I+TPDSS++ I
Sbjct: 5 EVEDKMQKAIDATQSNFNTVRTGRASTSLLDRINVEYYGMPTPLKSLANISTPDSSTITI 64
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QPYDK S+ IE+AI SDLG+ PNNDG+VIRL +PQLT+ERR+EL K+VAK AEEGKV
Sbjct: 65 QPYDKGSMGQIERAIAESDLGLMPNNDGQVIRLNIPQLTTERREELIKMVAKLAEEGKVA 124
Query: 219 M 219
+
Sbjct: 125 I 125
>gi|434407401|ref|YP_007150286.1| ribosome recycling factor [Cylindrospermum stagnale PCC 7417]
gi|428261656|gb|AFZ27606.1| ribosome recycling factor [Cylindrospermum stagnale PCC 7417]
Length = 182
Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 70/114 (61%), Positives = 98/114 (85%)
Query: 104 MERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDK 163
M++T++ + FN++RTGR+N ++LDK++VEYYG+P SLKS+A I+TPD+S++LIQPYD+
Sbjct: 10 MQKTVEATQRAFNTIRTGRANASLLDKVQVEYYGTPTSLKSLANISTPDASTILIQPYDR 69
Query: 164 SSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
SSL +EKAI SD+G+TP+NDG VIRL +P LTS+RRKEL+K+ AK AEEG+V
Sbjct: 70 SSLNIVEKAISLSDVGLTPSNDGSVIRLNIPPLTSDRRKELAKLAAKYAEEGRV 123
>gi|411121008|ref|ZP_11393380.1| ribosome recycling factor [Oscillatoriales cyanobacterium JSC-12]
gi|410709677|gb|EKQ67192.1| ribosome recycling factor [Oscillatoriales cyanobacterium JSC-12]
Length = 182
Score = 159 bits (402), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 72/119 (60%), Positives = 97/119 (81%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
DV+ M ++++ + +FN++RTGR+NPA+LD+I VEYYG+P LKS+A I+TPD+S++ I
Sbjct: 5 DVEDHMHKSVEATQRSFNTIRTGRANPALLDRISVEYYGAPTPLKSLANISTPDASTIAI 64
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
QP+D+SSL IEKAI SDLG+TPNNDG IR+ +P LTS+RRKEL K+ AK AEEGKV
Sbjct: 65 QPFDRSSLSLIEKAIQMSDLGLTPNNDGSTIRINIPPLTSDRRKELVKLAAKFAEEGKV 123
>gi|443476544|ref|ZP_21066445.1| ribosome recycling factor [Pseudanabaena biceps PCC 7429]
gi|443018494|gb|ELS32734.1| ribosome recycling factor [Pseudanabaena biceps PCC 7429]
Length = 187
Score = 159 bits (401), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 70/121 (57%), Positives = 101/121 (83%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
DV+ARM++ ++ + NFN+VRTGR+N ++LD+I VEYYG+ LK++A I++PD+S+L I
Sbjct: 10 DVEARMQKAVEATQHNFNTVRTGRANASLLDRITVEYYGAETHLKALANISSPDASTLQI 69
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QP+D+S++++IEKAI SD+G+TPNNDG IRL +P LT++RRKEL K+VAK AEEGKV
Sbjct: 70 QPFDRSTMRAIEKAISESDIGLTPNNDGVSIRLNIPPLTTDRRKELVKMVAKLAEEGKVA 129
Query: 219 M 219
+
Sbjct: 130 I 130
>gi|428221718|ref|YP_007105888.1| ribosome recycling factor [Synechococcus sp. PCC 7502]
gi|427995058|gb|AFY73753.1| ribosome recycling factor [Synechococcus sp. PCC 7502]
Length = 187
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 73/119 (61%), Positives = 97/119 (81%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
DV+ARM++ I+ + NFN+VRTGR++ A+LD++ VEYYGSP LKS+A + TPDS++++I
Sbjct: 10 DVEARMQKGIEATQQNFNTVRTGRASTALLDRVMVEYYGSPTPLKSLANVTTPDSTTIMI 69
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
QPYD+ SL I +AI SD+G+TPNNDG IRL +P LTS+RRKEL K+VAK AEEGKV
Sbjct: 70 QPYDRGSLNIISRAISESDVGLTPNNDGISIRLNIPPLTSDRRKELVKLVAKLAEEGKV 128
>gi|284928759|ref|YP_003421281.1| ribosome recycling factor [cyanobacterium UCYN-A]
gi|284809218|gb|ADB94923.1| ribosome recycling factor [cyanobacterium UCYN-A]
Length = 181
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 71/121 (58%), Positives = 98/121 (80%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D+K M++T++ + +FN++RTGR+N A+LD++ V+YYGS V LKS+A INTPD+++LLI
Sbjct: 4 DLKDSMKKTVESTQKSFNTLRTGRANSAILDRVTVDYYGSEVQLKSLANINTPDATTLLI 63
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QP+D+ S+ IEKAI SD+G+TPNNDG+VIRL +P LT ERRKEL K+ K AEEGKV
Sbjct: 64 QPFDRGSIGQIEKAINMSDVGLTPNNDGQVIRLNIPPLTKERRKELVKIANKMAEEGKVA 123
Query: 219 M 219
+
Sbjct: 124 I 124
>gi|308800952|ref|XP_003075257.1| putative Ribosome recycling factor, (ISS) [Ostreococcus tauri]
gi|116061811|emb|CAL52529.1| putative Ribosome recycling factor, (ISS) [Ostreococcus tauri]
Length = 236
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 70/124 (56%), Positives = 99/124 (79%)
Query: 96 IEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSS 155
IE D RME+T+D + +F++VRTGR+N ++LD+IEV+YYG+ LK+IA +TPD+ +
Sbjct: 56 IELDAMERMEKTMDAIANDFSTVRTGRANASVLDRIEVDYYGAATPLKTIANASTPDAQT 115
Query: 156 LLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEG 215
++IQP+DK ++K IE+AI SDLGMTP+NDG VIRL +P LT ERRKEL+K+V+K E+G
Sbjct: 116 IVIQPFDKGAIKDIERAINESDLGMTPSNDGNVIRLNVPTLTEERRKELAKLVSKLGEDG 175
Query: 216 KVVM 219
KV +
Sbjct: 176 KVAL 179
>gi|428200723|ref|YP_007079312.1| ribosome recycling factor [Pleurocapsa sp. PCC 7327]
gi|427978155|gb|AFY75755.1| ribosome recycling factor [Pleurocapsa sp. PCC 7327]
Length = 182
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 69/121 (57%), Positives = 98/121 (80%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
DV+ M++TI+ + FN++RTGR+N A+LD++ V+YYG+ LKS+A I+TPD++++++
Sbjct: 5 DVQENMQKTIEATQRAFNTIRTGRANAALLDRVTVDYYGTETPLKSLANISTPDATTIIV 64
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QPYDKSS+ IEKAI SD+G+TPNNDG+VIRL +P LT+ERRKEL K+ K AEEGKV
Sbjct: 65 QPYDKSSMAQIEKAISMSDVGLTPNNDGQVIRLNIPPLTAERRKELVKLAGKLAEEGKVA 124
Query: 219 M 219
+
Sbjct: 125 L 125
>gi|86605415|ref|YP_474178.1| ribosome recycling factor [Synechococcus sp. JA-3-3Ab]
gi|86553957|gb|ABC98915.1| ribosome recycling factor [Synechococcus sp. JA-3-3Ab]
Length = 182
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 71/119 (59%), Positives = 99/119 (83%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+++ M + + + +FN+VRTGR+N ++LD+I+VEYYG P LK++A + TPDSS+LLI
Sbjct: 5 EIEELMNKAVQATQRSFNTVRTGRANSSLLDRIQVEYYGVPTPLKALASLTTPDSSTLLI 64
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
QP+D S+L +IE+AIV+SDLG+TP+NDG+V+RLT+P LT ERRKELSK VAK AEEG+V
Sbjct: 65 QPFDPSTLAAIERAIVASDLGLTPSNDGKVVRLTIPPLTEERRKELSKQVAKLAEEGRV 123
>gi|145343357|ref|XP_001416314.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576539|gb|ABO94607.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 176
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 68/117 (58%), Positives = 97/117 (82%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
RME+T+D + +F++VRTGR+N A+LD+IEV+YYG+P LK+IA +TPD+ ++ IQP+D
Sbjct: 3 RMEKTMDAIANDFSTVRTGRANAAVLDRIEVDYYGAPTPLKTIANASTPDAQTITIQPFD 62
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
KS++K IE+AI SDLGM P+NDG +IRL +P LT+ERRKEL+K+V+K E+GKV +
Sbjct: 63 KSAIKDIERAINESDLGMNPSNDGNIIRLNVPPLTAERRKELAKLVSKLGEDGKVAL 119
>gi|428214638|ref|YP_007087782.1| ribosome recycling factor [Oscillatoria acuminata PCC 6304]
gi|428003019|gb|AFY83862.1| ribosome recycling factor [Oscillatoria acuminata PCC 6304]
Length = 182
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 70/121 (57%), Positives = 98/121 (80%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+V+ M++ ++ + +FN++RTGR+N ++LDK+ VEYYG+P LKS+A INTPD+S++ I
Sbjct: 5 EVEDLMKKAVEATQRSFNTIRTGRANTSLLDKVMVEYYGTPTPLKSLASINTPDASTISI 64
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QP+D+ SL IEKAI++SDLG+TPNNDG +IRL +PQLTS+RR EL KV K AEEGKV
Sbjct: 65 QPFDRGSLAVIEKAILTSDLGLTPNNDGAIIRLNIPQLTSDRRLELVKVAGKYAEEGKVA 124
Query: 219 M 219
+
Sbjct: 125 I 125
>gi|298489665|ref|YP_003719842.1| ribosome recycling factor ['Nostoc azollae' 0708]
gi|298231583|gb|ADI62719.1| ribosome recycling factor ['Nostoc azollae' 0708]
Length = 182
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 69/119 (57%), Positives = 100/119 (84%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+ +++M++T++ + FN++RTGR+N ++LD+I+VEYYGSP LKS+A I+TPD+S++LI
Sbjct: 5 EAESKMQKTVESTQQAFNTIRTGRANASLLDRIQVEYYGSPTPLKSLANISTPDASTILI 64
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
QPYD+SSL +EKAI SD+G+TP+NDG VIRL +P LTS+RRKE +K+ AK AEEG+V
Sbjct: 65 QPYDRSSLNILEKAISLSDIGITPSNDGSVIRLNIPPLTSDRRKEFAKLAAKYAEEGRV 123
>gi|86610317|ref|YP_479079.1| ribosome recycling factor [Synechococcus sp. JA-2-3B'a(2-13)]
gi|123500677|sp|Q2JHW2.1|RRF_SYNJB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|86558859|gb|ABD03816.1| ribosome recycling factor [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 182
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 71/119 (59%), Positives = 99/119 (83%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+++ M + + + +FN+VRTGR+N ++LD+I+VEYYG P LK++A + TPDSS+LLI
Sbjct: 5 EIEELMNKAVQATQRSFNTVRTGRANSSLLDRIQVEYYGVPTPLKALASLTTPDSSTLLI 64
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
QP+D S+L +IE+AIV+SDLG+TP+NDG+V+RLT+P LT ERRKELSK VAK AEEG+V
Sbjct: 65 QPFDPSTLAAIERAIVASDLGLTPSNDGKVVRLTIPPLTEERRKELSKQVAKLAEEGRV 123
>gi|428210142|ref|YP_007094495.1| ribosome recycling factor [Chroococcidiopsis thermalis PCC 7203]
gi|428012063|gb|AFY90626.1| ribosome recycling factor [Chroococcidiopsis thermalis PCC 7203]
Length = 182
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 69/121 (57%), Positives = 99/121 (81%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+ ++ M++T++ + +FN++RTGR+N ++LD++ VEYYGSP SLKS+A I+TPD++++ I
Sbjct: 5 EAESTMQKTVEATQRSFNTIRTGRANASLLDRVMVEYYGSPTSLKSLASISTPDATTITI 64
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QP+D+S+L SIEKAI SD+G+TPNNDG IRL +P LTSERRKE K+ AK AEEGKV
Sbjct: 65 QPFDRSTLNSIEKAISMSDVGLTPNNDGSTIRLNIPPLTSERRKEFIKLAAKYAEEGKVA 124
Query: 219 M 219
+
Sbjct: 125 I 125
>gi|354567994|ref|ZP_08987161.1| Ribosome-recycling factor [Fischerella sp. JSC-11]
gi|353541668|gb|EHC11135.1| Ribosome-recycling factor [Fischerella sp. JSC-11]
Length = 182
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 70/114 (61%), Positives = 95/114 (83%)
Query: 104 MERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDK 163
M++T++ + FN++RTGR+N ++LDK+ VEYYG+P LKS+A I+TPD++++LIQPYD+
Sbjct: 10 MQKTVEATQRAFNTIRTGRANASLLDKVTVEYYGTPTPLKSLANISTPDATTILIQPYDR 69
Query: 164 SSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
SSL IEKAI SD+G+TP+NDG VIRL +P LTSERRKEL K+ AK AEEG+V
Sbjct: 70 SSLNLIEKAISMSDVGLTPSNDGSVIRLNIPPLTSERRKELVKIAAKYAEEGRV 123
>gi|427710077|ref|YP_007052454.1| ribosome recycling factor [Nostoc sp. PCC 7107]
gi|427362582|gb|AFY45304.1| ribosome recycling factor [Nostoc sp. PCC 7107]
Length = 182
Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 69/116 (59%), Positives = 96/116 (82%)
Query: 104 MERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDK 163
M++T++ + FN++RTGR+N ++LDK+ V+YYGSP +LKS+A I+TPD++++LIQPYDK
Sbjct: 10 MQKTVESTQRAFNTIRTGRANSSLLDKVMVDYYGSPTALKSLANISTPDATTILIQPYDK 69
Query: 164 SSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
SSL +EKAI SD+G+TPNNDG VIRL +P LTS+RRKE K+ AK AEEG+V +
Sbjct: 70 SSLNIVEKAISLSDVGLTPNNDGSVIRLNIPPLTSDRRKEFVKLAAKYAEEGRVAI 125
>gi|428312785|ref|YP_007123762.1| ribosome recycling factor [Microcoleus sp. PCC 7113]
gi|428254397|gb|AFZ20356.1| ribosome recycling factor [Microcoleus sp. PCC 7113]
Length = 182
Score = 155 bits (393), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 69/121 (57%), Positives = 96/121 (79%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D ++ M++ ++ + FN++RTGR+N +LD++ V+YYGSP LKS+A INTPD+S++ I
Sbjct: 5 DAESNMQKAVEATQRAFNTIRTGRANATLLDRVMVDYYGSPTPLKSLANINTPDASTITI 64
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QPYDK+SL +EKAI SD+G+TPNNDG+VIRL +P LTSERRKE K+ +K AEEGKV
Sbjct: 65 QPYDKTSLNVVEKAIQLSDIGLTPNNDGQVIRLNVPPLTSERRKEFVKMASKFAEEGKVA 124
Query: 219 M 219
+
Sbjct: 125 I 125
>gi|282898680|ref|ZP_06306668.1| Ribosome recycling factor [Cylindrospermopsis raciborskii CS-505]
gi|281196548|gb|EFA71457.1| Ribosome recycling factor [Cylindrospermopsis raciborskii CS-505]
Length = 182
Score = 155 bits (393), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 69/114 (60%), Positives = 95/114 (83%)
Query: 104 MERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDK 163
M +T++ + FNS+RTGR+N ++LDK++V+YYGSP SLKS+A I TPD++++LIQPYD+
Sbjct: 10 MNKTVEATQRAFNSIRTGRANASLLDKVQVDYYGSPTSLKSLANITTPDATTILIQPYDR 69
Query: 164 SSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
+SL +EKAI SD+G+TP+NDG VIRL +P LTS+RRKEL K+ AK AEEG+V
Sbjct: 70 TSLNIVEKAISLSDVGLTPSNDGSVIRLNIPPLTSDRRKELVKLAAKYAEEGRV 123
>gi|434400388|ref|YP_007134392.1| ribosome recycling factor [Stanieria cyanosphaera PCC 7437]
gi|428271485|gb|AFZ37426.1| ribosome recycling factor [Stanieria cyanosphaera PCC 7437]
Length = 182
Score = 155 bits (393), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 68/119 (57%), Positives = 97/119 (81%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
++K M++T++ + +FN++RTGR+N ++LD++ VEYYG+ LKS+A I+TPD+++++I
Sbjct: 5 EIKEHMQKTVEATQRSFNTIRTGRANASLLDRVVVEYYGTETPLKSLANISTPDATTIVI 64
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
QPYDK S+ IEKAI SDLG+TPNNDG+VIRL +P LTSERR+EL K+ K AEEGKV
Sbjct: 65 QPYDKGSMAQIEKAITMSDLGLTPNNDGQVIRLNIPPLTSERRQELVKMAGKLAEEGKV 123
>gi|427717439|ref|YP_007065433.1| ribosome recycling factor [Calothrix sp. PCC 7507]
gi|427349875|gb|AFY32599.1| ribosome recycling factor [Calothrix sp. PCC 7507]
Length = 182
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 71/114 (62%), Positives = 93/114 (81%)
Query: 104 MERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDK 163
M++T++ FN++RTGR+N ++LDK+ VEYYGSP SLKS+A I+TPD+S++LIQPYD+
Sbjct: 10 MQKTVEATLRAFNTIRTGRANASLLDKVVVEYYGSPTSLKSLANISTPDASTILIQPYDR 69
Query: 164 SSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
SSL +EKAI SDLG+TP+NDG VIRL +P LTS+RRKE K AK AEEG+V
Sbjct: 70 SSLNIVEKAISLSDLGLTPSNDGSVIRLNIPPLTSDRRKEFVKTAAKYAEEGRV 123
>gi|427732541|ref|YP_007078778.1| ribosome recycling factor [Nostoc sp. PCC 7524]
gi|427368460|gb|AFY51181.1| ribosome recycling factor [Nostoc sp. PCC 7524]
Length = 182
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 69/119 (57%), Positives = 97/119 (81%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+ +++M++T++ + FN++RTGR+N ++LDK+ VEYYGSP LKS+A I+TPD++++LI
Sbjct: 5 EAQSKMQKTVEATQHAFNTIRTGRANASLLDKVSVEYYGSPTPLKSLANISTPDATTILI 64
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
QPYDK SL IEKAI SD+G+TP+NDG VIRL +P LTS+RRKE K+ AK AEEG+V
Sbjct: 65 QPYDKGSLSLIEKAISMSDVGLTPSNDGSVIRLNIPPLTSDRRKEFVKLAAKYAEEGRV 123
>gi|443323557|ref|ZP_21052562.1| ribosome recycling factor [Gloeocapsa sp. PCC 73106]
gi|442786737|gb|ELR96465.1| ribosome recycling factor [Gloeocapsa sp. PCC 73106]
Length = 182
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 66/121 (54%), Positives = 101/121 (83%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
++K +M++TI+ + +FN++RTGR+N ++LD++ VEYYGS SLK++A I+TPD+S++LI
Sbjct: 5 EIKDQMQKTIESTQRSFNTIRTGRANASLLDRVTVEYYGSETSLKALANISTPDASTILI 64
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QP+D+ S+ IEKAI SD+G+TPNNDG++IRL +P LT++RR+EL K+ +K AEEGKV
Sbjct: 65 QPFDRGSMAQIEKAISLSDIGITPNNDGQIIRLNIPPLTAQRRQELVKIASKYAEEGKVA 124
Query: 219 M 219
+
Sbjct: 125 I 125
>gi|443314164|ref|ZP_21043747.1| ribosome recycling factor [Leptolyngbya sp. PCC 6406]
gi|442786236|gb|ELR95993.1| ribosome recycling factor [Leptolyngbya sp. PCC 6406]
Length = 185
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 70/119 (58%), Positives = 95/119 (79%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D++ M + ++ R FN++RTGR+N ++LDK+ V+YYGSP LKS+A INTPD+S+L I
Sbjct: 8 DIEEAMAKAVEATRRAFNTIRTGRANASLLDKVMVDYYGSPTPLKSLANINTPDASTLSI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
QP+D SS+ +IEKAI SD+G+TPNNDG++IRL +P LTSERRKE KV +K AEEG+V
Sbjct: 68 QPFDPSSVSAIEKAISLSDIGLTPNNDGKIIRLNIPPLTSERRKEFVKVASKYAEEGRV 126
>gi|17228703|ref|NP_485251.1| ribosome recycling factor [Nostoc sp. PCC 7120]
gi|22001942|sp|Q8YXK4.1|RRF_ANASP RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|17130555|dbj|BAB73165.1| ribosome recycling factor [Nostoc sp. PCC 7120]
Length = 182
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 69/121 (57%), Positives = 99/121 (81%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+ +++M+ T++ + FN++RTGR+N ++LDK+ V+YYGSP LKS+A I+TPD++++LI
Sbjct: 5 EAESKMQHTVEATQRAFNTIRTGRANASLLDKVLVDYYGSPTPLKSLANISTPDATTILI 64
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QPYDKSSL +EKAI SD+G+TP+NDG VIRL +P LTS+RRKEL K+ AK AEEG+V
Sbjct: 65 QPYDKSSLNIVEKAISLSDVGLTPSNDGAVIRLNIPPLTSDRRKELVKIAAKYAEEGRVA 124
Query: 219 M 219
+
Sbjct: 125 I 125
>gi|414078729|ref|YP_006998047.1| ribosome recycling factor [Anabaena sp. 90]
gi|413972145|gb|AFW96234.1| ribosome recycling factor [Anabaena sp. 90]
Length = 182
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 69/116 (59%), Positives = 95/116 (81%)
Query: 104 MERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDK 163
M++T++ + FN++RTGR+N ++LDK++VEYYG+P SLK++ I+TPDSS++LIQPYDK
Sbjct: 10 MQKTVESTQRAFNTIRTGRANASLLDKVQVEYYGTPTSLKALTNISTPDSSTILIQPYDK 69
Query: 164 SSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
SL IEKAI SD+G+TP+NDG VIRL +P LTS+RRKE K+ AK AEEG+V +
Sbjct: 70 GSLNIIEKAISLSDVGLTPSNDGSVIRLNIPPLTSDRRKEFVKLAAKYAEEGRVAI 125
>gi|440680129|ref|YP_007154924.1| ribosome recycling factor [Anabaena cylindrica PCC 7122]
gi|428677248|gb|AFZ56014.1| ribosome recycling factor [Anabaena cylindrica PCC 7122]
Length = 182
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 68/119 (57%), Positives = 97/119 (81%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+ +++M+ T++ + FN++RTGR+N ++LDK++VEYYG+P LKS+A I+TPD+S++LI
Sbjct: 5 EAESKMQHTVEATQRAFNTIRTGRANASLLDKVQVEYYGTPTGLKSLANISTPDASTILI 64
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
QPYDK SL +EKAI SD+G+TP+NDG VIRL +P LTS+RRKE K+ AK AEEG+V
Sbjct: 65 QPYDKGSLNIVEKAISLSDIGITPSNDGSVIRLNIPPLTSDRRKEFVKMAAKYAEEGRV 123
>gi|86606512|ref|YP_475275.1| ribosome recycling factor [Synechococcus sp. JA-3-3Ab]
gi|86555054|gb|ABD00012.1| ribosome recycling factor [Synechococcus sp. JA-3-3Ab]
Length = 182
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 69/119 (57%), Positives = 98/119 (82%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+++ M + + + +FN+VRTGR+N ++LD+++VEYYG P LK++A I TPD+S+LLI
Sbjct: 5 EIEELMSKAVQATQRSFNTVRTGRANASLLDRVQVEYYGVPTPLKALASITTPDASTLLI 64
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
QP+D S+L +IE+AIV+SDLG+TP+NDG+V+RL +P LT ERRKELSK VAK AEEG+V
Sbjct: 65 QPFDPSTLAAIERAIVASDLGLTPSNDGKVVRLNIPPLTEERRKELSKQVAKLAEEGRV 123
>gi|56751022|ref|YP_171723.1| ribosome recycling factor [Synechococcus elongatus PCC 6301]
gi|81299318|ref|YP_399526.1| ribosome recycling factor [Synechococcus elongatus PCC 7942]
gi|60390663|sp|Q5N3B7.1|RRF_SYNP6 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|123557390|sp|Q31QY0.1|RRF_SYNE7 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|56685981|dbj|BAD79203.1| ribosome recycling factor [Synechococcus elongatus PCC 6301]
gi|81168199|gb|ABB56539.1| ribosome recycling factor [Synechococcus elongatus PCC 7942]
Length = 182
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 70/121 (57%), Positives = 100/121 (82%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
DV++ M+++++ +FN++RTGR+N ++LDKI V+YYGS LKS+A I+TPD+S+L I
Sbjct: 5 DVESTMQKSVEATLRSFNTIRTGRANASLLDKIVVDYYGSETPLKSLASISTPDASTLQI 64
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QP+D+SS+ +IEKAI SD+G+TPNNDG++IRL +P LTS+RRKEL K+ AK AEEGKV
Sbjct: 65 QPFDRSSMGAIEKAISLSDIGLTPNNDGQIIRLNIPPLTSDRRKELVKLAAKYAEEGKVA 124
Query: 219 M 219
+
Sbjct: 125 I 125
>gi|303273418|ref|XP_003056070.1| ribosomal recycling factor, chloroplast precursor [Micromonas
pusilla CCMP1545]
gi|226462154|gb|EEH59446.1| ribosomal recycling factor, chloroplast precursor [Micromonas
pusilla CCMP1545]
Length = 245
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 68/125 (54%), Positives = 97/125 (77%)
Query: 95 SIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSS 154
IE+ RME+++D +R N N+VRTGR+N A+LD+IEVEYYGS LKS+A I TPD+
Sbjct: 67 DIEQSADDRMEKSVDSIRNNLNTVRTGRANAAILDRIEVEYYGSVTPLKSLANITTPDAQ 126
Query: 155 SLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEE 214
+++IQP+DK+ + +EKAI+SSDL + P NDG IRL +P LT+ERR++L+K+V+K E+
Sbjct: 127 TIIIQPFDKNIIDDVEKAIMSSDLDLMPGNDGNCIRLNIPPLTAERRRDLAKLVSKLGED 186
Query: 215 GKVVM 219
GKV +
Sbjct: 187 GKVAL 191
>gi|428775626|ref|YP_007167413.1| ribosome recycling factor [Halothece sp. PCC 7418]
gi|428689905|gb|AFZ43199.1| ribosome recycling factor [Halothece sp. PCC 7418]
Length = 182
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 69/119 (57%), Positives = 97/119 (81%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
DV+ +M+++ID + +FNS+RTGR+N ++LD++ VEYYG LKS+A I+TPD++++ I
Sbjct: 5 DVENKMKKSIDATQQSFNSLRTGRANASVLDRVMVEYYGMETPLKSLANISTPDATTITI 64
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
QPYDK SL+ IEKAI SD+G+TPNNDGE++RL +P LTSERR+EL K+ K AEEG+V
Sbjct: 65 QPYDKGSLEQIEKAISMSDVGLTPNNDGEMVRLNIPPLTSERRQELVKIAGKYAEEGRV 123
>gi|412988542|emb|CCO17878.1| ribosome recycling factor [Bathycoccus prasinos]
Length = 254
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 71/121 (58%), Positives = 96/121 (79%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D RME+ ++++ NF++VRTGR+NP MLD+IEV+YYG+ LKS++ N D+ +L+I
Sbjct: 77 DCMDRMEKAMEVMTDNFSTVRTGRANPNMLDRIEVDYYGAMTPLKSLSNTNNLDAQTLVI 136
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QP+DK +LK IEKAIV SDLG+TP+NDG VIRL +P LT+ERRKEL+K V+K EEGKV
Sbjct: 137 QPFDKGALKEIEKAIVRSDLGITPSNDGSVIRLVVPPLTAERRKELTKQVSKLGEEGKVA 196
Query: 219 M 219
+
Sbjct: 197 L 197
>gi|22297803|ref|NP_681050.1| ribosome recycling factor [Thermosynechococcus elongatus BP-1]
gi|34222747|sp|Q8DM64.1|RRF_THEEB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|22293980|dbj|BAC07812.1| ribosome releasing factor [Thermosynechococcus elongatus BP-1]
Length = 182
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 68/121 (56%), Positives = 98/121 (80%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
DV+ RM+++++ + +FNS+RTGR+N A+LD++ V+YYG+ L+S+A ++TPD++++LI
Sbjct: 5 DVEERMQKSVEATQHDFNSIRTGRANAALLDRVMVDYYGTETPLRSLANVSTPDATTILI 64
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QPYD+S+L SIEKAI SDLG+TPNNDG +RL +P LT+ERRKEL K AK AE GKV
Sbjct: 65 QPYDRSTLASIEKAIQLSDLGLTPNNDGSSVRLNIPPLTTERRKELVKTAAKIAEGGKVA 124
Query: 219 M 219
+
Sbjct: 125 I 125
>gi|428779229|ref|YP_007171015.1| ribosome recycling factor [Dactylococcopsis salina PCC 8305]
gi|428693508|gb|AFZ49658.1| ribosome recycling factor [Dactylococcopsis salina PCC 8305]
Length = 182
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 68/119 (57%), Positives = 96/119 (80%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
DV+ +M++ ID + +FNS+RTGR+N ++LD++ VEYYG LKS+A I+TPD++++ I
Sbjct: 5 DVETKMKKAIDATQQSFNSLRTGRANASVLDRVMVEYYGMETPLKSLANISTPDATTITI 64
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
QPYDK SL+ IEKAI SD+G+TPNNDGE++RL +P LTS+RR+EL K+ K AEEG+V
Sbjct: 65 QPYDKGSLQQIEKAISMSDIGLTPNNDGEMVRLNIPPLTSDRRQELVKIAGKYAEEGRV 123
>gi|428226861|ref|YP_007110958.1| ribosome recycling factor [Geitlerinema sp. PCC 7407]
gi|427986762|gb|AFY67906.1| ribosome recycling factor [Geitlerinema sp. PCC 7407]
Length = 182
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 70/119 (58%), Positives = 95/119 (79%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+V+ M++ ++ + FN+VRTGR+N ++LD++ VEYYG+ LKS+A INTPD++++ I
Sbjct: 5 EVEVHMQKAVESTQRAFNTVRTGRANVSLLDRVTVEYYGTETPLKSLANINTPDATTITI 64
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
QPYDK SL IEKAI SD+G+TPNNDG VIRL +P LT++RRKEL K+VAK AEEGKV
Sbjct: 65 QPYDKGSLNVIEKAISLSDIGLTPNNDGSVIRLNIPPLTTDRRKELVKMVAKMAEEGKV 123
>gi|352094730|ref|ZP_08955901.1| Ribosome-recycling factor [Synechococcus sp. WH 8016]
gi|351681070|gb|EHA64202.1| Ribosome-recycling factor [Synechococcus sp. WH 8016]
Length = 182
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 67/121 (55%), Positives = 95/121 (78%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D++A M ++++ + NFN++RTGR+NP++LD+I VEYYG+ LKS+A ++TPDS ++ +
Sbjct: 5 DLEANMRKSVEATQRNFNTIRTGRANPSLLDRINVEYYGADTPLKSLASLSTPDSQTIAV 64
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QP+D SL IEKAI +SDLG TPNNDG+VIR+ +P LT ERRKE K+ AK +EEGKV
Sbjct: 65 QPFDMGSLALIEKAIATSDLGFTPNNDGKVIRINVPPLTEERRKEFCKLAAKYSEEGKVA 124
Query: 219 M 219
+
Sbjct: 125 L 125
>gi|365845529|ref|ZP_09386295.1| ribosome recycling factor [Flavonifractor plautii ATCC 29863]
gi|373115408|ref|ZP_09529582.1| ribosome recycling factor [Lachnospiraceae bacterium 7_1_58FAA]
gi|364560062|gb|EHM38018.1| ribosome recycling factor [Flavonifractor plautii ATCC 29863]
gi|371670474|gb|EHO35555.1| ribosome recycling factor [Lachnospiraceae bacterium 7_1_58FAA]
Length = 184
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 71/124 (57%), Positives = 95/124 (76%)
Query: 96 IEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSS 155
+ K+ A+M++TID+V ++F SVR GR+N A+LDKI V+YYG+P L +A I++PD S
Sbjct: 4 VNKEFDAKMQKTIDVVMSDFASVRAGRANAAVLDKITVDYYGAPTPLNQVAAISSPDPRS 63
Query: 156 LLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEG 215
L+IQP+D + LK+IEKAI +SDLG+ P NDG+VIRL PQLT ERRKEL+K V K E G
Sbjct: 64 LMIQPWDSTLLKAIEKAIQTSDLGINPQNDGKVIRLAFPQLTEERRKELTKQVKKYGENG 123
Query: 216 KVVM 219
KV +
Sbjct: 124 KVAI 127
>gi|307152127|ref|YP_003887511.1| ribosome recycling factor [Cyanothece sp. PCC 7822]
gi|306982355|gb|ADN14236.1| ribosome recycling factor [Cyanothece sp. PCC 7822]
Length = 182
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 68/121 (56%), Positives = 97/121 (80%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+V+ M++TI+ + +FN++RTGR+N ++LD++ VEYYG+ LKS+A I TPD++++ I
Sbjct: 5 EVQENMQKTIEATQRSFNTIRTGRANASLLDRVTVEYYGTETPLKSLANITTPDATTIAI 64
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QPYD+SSL IEKAI SD+G+TPNNDG++IRL +P LTS+RRKEL K+ K AEEGKV
Sbjct: 65 QPYDRSSLGKIEKAIQMSDVGLTPNNDGQIIRLNIPPLTSDRRKELVKLAGKLAEEGKVA 124
Query: 219 M 219
+
Sbjct: 125 V 125
>gi|427701395|ref|YP_007044617.1| ribosome recycling factor [Cyanobium gracile PCC 6307]
gi|427344563|gb|AFY27276.1| ribosome recycling factor [Cyanobium gracile PCC 6307]
Length = 179
Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 69/121 (57%), Positives = 95/121 (78%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D++A M ++++ + FN++RTGR+NP++LDK+ VEYYGS LKS+A I+TPD+ ++ I
Sbjct: 2 DLEASMRKSVEATQRTFNTIRTGRANPSLLDKLTVEYYGSETPLKSLATISTPDAQTIQI 61
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QP+DK S+ IEKAI SDLG+TPNNDG VIR+ +P LT +RRKEL K+ AK AEEGKV
Sbjct: 62 QPFDKGSMALIEKAIAMSDLGLTPNNDGRVIRINIPPLTEDRRKELCKLAAKYAEEGKVG 121
Query: 219 M 219
+
Sbjct: 122 L 122
>gi|113953351|ref|YP_731208.1| ribosome recycling factor [Synechococcus sp. CC9311]
gi|122945600|sp|Q0I8L4.1|RRF_SYNS3 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|113880702|gb|ABI45660.1| ribosome recycling factor [Synechococcus sp. CC9311]
Length = 182
Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 66/121 (54%), Positives = 95/121 (78%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D++A M ++++ + NFN++RTGR+NP++LD+I VEYYG+ LKS+A ++TPDS ++ +
Sbjct: 5 DLEANMRKSVEATQRNFNTIRTGRANPSLLDRINVEYYGADTPLKSLASLSTPDSQTIAV 64
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QP+D SL IEKAI +SDLG TPNNDG++IR+ +P LT ERRKE K+ AK +EEGKV
Sbjct: 65 QPFDMGSLALIEKAIATSDLGFTPNNDGKIIRINVPPLTEERRKEFCKLAAKYSEEGKVA 124
Query: 219 M 219
+
Sbjct: 125 L 125
>gi|113477237|ref|YP_723298.1| ribosome recycling factor [Trichodesmium erythraeum IMS101]
gi|123160353|sp|Q10Y49.1|RRF_TRIEI RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|110168285|gb|ABG52825.1| ribosome recycling factor [Trichodesmium erythraeum IMS101]
Length = 182
Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 69/120 (57%), Positives = 95/120 (79%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K+ + +M++ I+ + +FN+VRTGR+N ++LD++ VEYYGSP LKS+A I PD+S++
Sbjct: 4 KEAEEKMQKAIEATKNSFNTVRTGRANASLLDRVMVEYYGSPTQLKSMANIGIPDASTIT 63
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
IQPYDK+SL IEKAI SD+G+TPNNDG +IRL +P LT+ERR+E+ K AK AEEGKV
Sbjct: 64 IQPYDKTSLGLIEKAINMSDVGLTPNNDGSIIRLNIPALTAERRQEMVKKTAKLAEEGKV 123
>gi|119487064|ref|ZP_01620936.1| ribosome releasing factor [Lyngbya sp. PCC 8106]
gi|119455993|gb|EAW37127.1| ribosome releasing factor [Lyngbya sp. PCC 8106]
Length = 182
Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 67/119 (56%), Positives = 98/119 (82%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+V++ M++ ++ + +FN++RTGR+N ++LD++ VEYYG+P SLKS+A INTPDSS+++I
Sbjct: 5 EVESLMQKAVESTQRSFNTIRTGRANTSLLDRVMVEYYGTPTSLKSLATINTPDSSTIMI 64
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
QP+D+ +L IEKAI SD+G+TPNNDG +IRL +P LTSERR+E K+ +K AEEGKV
Sbjct: 65 QPFDRKTLDIIEKAISLSDVGLTPNNDGSIIRLNIPPLTSERRQEFVKLASKYAEEGKV 123
>gi|282897920|ref|ZP_06305915.1| Ribosome recycling factor [Raphidiopsis brookii D9]
gi|281197064|gb|EFA71965.1| Ribosome recycling factor [Raphidiopsis brookii D9]
Length = 182
Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 94/114 (82%)
Query: 104 MERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDK 163
M +T++ + FNS+RTGR+N ++LDK++V+YYGSP LKS++ I TPD+S++LIQPYD+
Sbjct: 10 MNKTVEATQRAFNSIRTGRANASLLDKVQVDYYGSPTPLKSLSNITTPDASTILIQPYDR 69
Query: 164 SSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
SSL +EKAI SD+G+TP+NDG V+RL +P LTS+RRKEL K+ AK AEEG+V
Sbjct: 70 SSLNIVEKAISLSDVGLTPSNDGSVVRLNIPPLTSDRRKELVKLAAKYAEEGRV 123
>gi|428301411|ref|YP_007139717.1| ribosome recycling factor [Calothrix sp. PCC 6303]
gi|428237955|gb|AFZ03745.1| ribosome recycling factor [Calothrix sp. PCC 6303]
Length = 182
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 67/116 (57%), Positives = 94/116 (81%)
Query: 104 MERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDK 163
M++T++ FN++RTGR+N ++LDK+ VEYYG+P LKS+ I+TPD++++LIQPYDK
Sbjct: 10 MQKTVEATLRAFNTIRTGRANSSLLDKVTVEYYGTPTPLKSLVNISTPDATTILIQPYDK 69
Query: 164 SSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
SSL ++EKAI SD+G+TP+NDG VIRL +P LTS+RRKE K+ AK AEEG+V +
Sbjct: 70 SSLNAVEKAISLSDVGLTPSNDGSVIRLNIPPLTSDRRKEFVKLAAKYAEEGRVAI 125
>gi|72383689|ref|YP_293044.1| ribosome recycling factor [Prochlorococcus marinus str. NATL2A]
gi|123620292|sp|Q46GQ5.1|RRF_PROMT RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|72003539|gb|AAZ59341.1| ribosome recycling factor [Prochlorococcus marinus str. NATL2A]
Length = 182
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 68/122 (55%), Positives = 94/122 (77%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
+++K M ++I+ + NFN++RTGR+N ++LD+I VEYYG+ LKS+A I TPDS ++
Sbjct: 4 QELKTTMSKSIEAAQRNFNTIRTGRANTSLLDRISVEYYGAETPLKSLATITTPDSQTIA 63
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
IQP+D SL SIEKAI +SDLG TPNNDG++IR+ +P LT ERRKE K+ +K AEEGKV
Sbjct: 64 IQPFDLGSLASIEKAIATSDLGFTPNNDGKIIRINVPPLTEERRKEFCKLASKYAEEGKV 123
Query: 218 VM 219
+
Sbjct: 124 AL 125
>gi|119513540|ref|ZP_01632559.1| ribosome releasing factor [Nodularia spumigena CCY9414]
gi|119461805|gb|EAW42823.1| ribosome releasing factor [Nodularia spumigena CCY9414]
Length = 182
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 67/116 (57%), Positives = 94/116 (81%)
Query: 104 MERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDK 163
M++T++ + FN++RTGR+N ++LDK+ V+YYGSP LKS+A I+TPD+S++LIQPYDK
Sbjct: 10 MQKTVEATQRAFNTIRTGRANASLLDKVSVDYYGSPTPLKSLANISTPDASTILIQPYDK 69
Query: 164 SSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
SL +EKAI SD+G+TP+NDG VIRL +P LTS+RRKE K+ +K AEEG+V +
Sbjct: 70 GSLNVVEKAISLSDVGLTPSNDGSVIRLNIPPLTSDRRKEFVKMASKYAEEGRVAI 125
>gi|407961473|dbj|BAM54713.1| ribosome recycling factor [Synechocystis sp. PCC 6803]
Length = 186
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 68/121 (56%), Positives = 97/121 (80%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
++K M+++++ + +FN++RTGR+N ++LD+I VEYYG+ LKS+A I TPD+S+++I
Sbjct: 9 ELKDHMQKSVEATQRSFNTIRTGRANASLLDRITVEYYGAETPLKSLATIGTPDASTIVI 68
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QP+D S+ +IEKAI SDLG+TPNNDG+VIRL +P LT+ERRKEL KV K AEEGKV
Sbjct: 69 QPFDMGSIGTIEKAISLSDLGLTPNNDGKVIRLNIPPLTAERRKELVKVAGKLAEEGKVA 128
Query: 219 M 219
+
Sbjct: 129 I 129
>gi|16331151|ref|NP_441879.1| ribosome recycling factor [Synechocystis sp. PCC 6803]
gi|383322894|ref|YP_005383747.1| ribosome releasing factor [Synechocystis sp. PCC 6803 substr. GT-I]
gi|383326063|ref|YP_005386916.1| ribosome releasing factor [Synechocystis sp. PCC 6803 substr.
PCC-P]
gi|383491947|ref|YP_005409623.1| ribosome releasing factor [Synechocystis sp. PCC 6803 substr.
PCC-N]
gi|384437215|ref|YP_005651939.1| ribosome releasing factor [Synechocystis sp. PCC 6803]
gi|451815308|ref|YP_007451760.1| ribosome releasing factor [Synechocystis sp. PCC 6803]
gi|3122780|sp|P74456.1|RRF_SYNY3 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|1653645|dbj|BAA18557.1| ribosome releasing factor [Synechocystis sp. PCC 6803]
gi|339274247|dbj|BAK50734.1| ribosome releasing factor [Synechocystis sp. PCC 6803]
gi|359272213|dbj|BAL29732.1| ribosome releasing factor [Synechocystis sp. PCC 6803 substr. GT-I]
gi|359275383|dbj|BAL32901.1| ribosome releasing factor [Synechocystis sp. PCC 6803 substr.
PCC-N]
gi|359278553|dbj|BAL36070.1| ribosome releasing factor [Synechocystis sp. PCC 6803 substr.
PCC-P]
gi|451781277|gb|AGF52246.1| ribosome releasing factor [Synechocystis sp. PCC 6803]
Length = 182
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 68/121 (56%), Positives = 97/121 (80%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
++K M+++++ + +FN++RTGR+N ++LD+I VEYYG+ LKS+A I TPD+S+++I
Sbjct: 5 ELKDHMQKSVEATQRSFNTIRTGRANASLLDRITVEYYGAETPLKSLATIGTPDASTIVI 64
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QP+D S+ +IEKAI SDLG+TPNNDG+VIRL +P LT+ERRKEL KV K AEEGKV
Sbjct: 65 QPFDMGSIGTIEKAISLSDLGLTPNNDGKVIRLNIPPLTAERRKELVKVAGKLAEEGKVA 124
Query: 219 M 219
+
Sbjct: 125 I 125
>gi|434393452|ref|YP_007128399.1| ribosome recycling factor [Gloeocapsa sp. PCC 7428]
gi|428265293|gb|AFZ31239.1| ribosome recycling factor [Gloeocapsa sp. PCC 7428]
Length = 182
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 66/114 (57%), Positives = 94/114 (82%)
Query: 104 MERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDK 163
M++ ++ + FN++RTGR+N ++LD++ VEYYG+P +LKS+A I+TPD++++ IQPYD+
Sbjct: 10 MQKAVEATQRAFNTIRTGRANASLLDRVMVEYYGTPTALKSLANISTPDATTITIQPYDR 69
Query: 164 SSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
SSL IEKAI SD+G+TPNNDG +IRL +P LTS+RRKEL K+ AK AEEG+V
Sbjct: 70 SSLNLIEKAISMSDVGLTPNNDGSMIRLNIPPLTSDRRKELVKLAAKYAEEGRV 123
>gi|428773325|ref|YP_007165113.1| ribosome recycling factor [Cyanobacterium stanieri PCC 7202]
gi|428687604|gb|AFZ47464.1| ribosome recycling factor [Cyanobacterium stanieri PCC 7202]
Length = 183
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 97/119 (81%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D+KA M+++++ + +FN++RTGR+N ++LDKI V+YYG+ LK+IA I+TPD++++LI
Sbjct: 6 DLKANMQKSVERTQQDFNTIRTGRANASLLDKIMVDYYGADTPLKTIAGISTPDATTILI 65
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
QP+D+ S+ IEKAI SD+G+TPNNDG+VIRL +P LT+ERR+E K+ K AE+GKV
Sbjct: 66 QPFDRGSMAQIEKAISLSDIGLTPNNDGQVIRLNIPPLTAERRQEFVKLAGKYAEDGKV 124
>gi|307111396|gb|EFN59630.1| hypothetical protein CHLNCDRAFT_29191 [Chlorella variabilis]
Length = 255
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 68/133 (51%), Positives = 103/133 (77%), Gaps = 8/133 (6%)
Query: 95 SIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSS 154
++E+D +ME++++ V+ +F +VRTGR+N AMLD+IE +YYG+ L+++A ++TP+S+
Sbjct: 66 TVEEDTMEKMEKSVESVKRSFGTVRTGRANAAMLDRIEFDYYGAMTPLRTVASVSTPEST 125
Query: 155 SLLIQ--------PYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSK 206
L+IQ PYD S++ +IE+AI+ SDLG+TPNNDG VIRL +PQLT+ERRKE+ K
Sbjct: 126 LLVIQARALLAAAPYDTSAIPAIERAIMQSDLGLTPNNDGRVIRLQVPQLTAERRKEMVK 185
Query: 207 VVAKQAEEGKVVM 219
+V+K EEGKV +
Sbjct: 186 IVSKLGEEGKVAV 198
>gi|427722319|ref|YP_007069596.1| ribosome recycling factor [Leptolyngbya sp. PCC 7376]
gi|427354039|gb|AFY36762.1| ribosome recycling factor [Leptolyngbya sp. PCC 7376]
Length = 182
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 69/121 (57%), Positives = 95/121 (78%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+++ M++TID + +FNS+RTGR++ A+LD+I VEYYG+ LKS+A I TPDSS+++I
Sbjct: 5 ELRDNMKKTIDATQRSFNSLRTGRASAALLDRITVEYYGADTPLKSLASITTPDSSTIMI 64
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QP+DK S+ IE+AI SDLG+TPNNDG ++RL +P LT ERRKEL K +K AEEGKV
Sbjct: 65 QPFDKGSVSDIERAISMSDLGLTPNNDGTIVRLNIPPLTKERRKELVKTASKLAEEGKVA 124
Query: 219 M 219
+
Sbjct: 125 I 125
>gi|254430178|ref|ZP_05043881.1| ribosome recycling factor [Cyanobium sp. PCC 7001]
gi|197624631|gb|EDY37190.1| ribosome recycling factor [Cyanobium sp. PCC 7001]
Length = 179
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 68/121 (56%), Positives = 93/121 (76%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D++A M +++D NFN++RTGR+NP++LDKI VEYYG+ LKS+A ++TPDS ++ I
Sbjct: 2 DLEASMRKSVDAALRNFNTIRTGRANPSLLDKISVEYYGAETPLKSLASLSTPDSQTIQI 61
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QP+D ++ IEKAI SDLG+T NNDG VIR+ +P LT +RRKEL K+ AK AEEGKV
Sbjct: 62 QPFDTGAMGLIEKAIAMSDLGLTCNNDGRVIRINIPPLTEDRRKELCKIAAKYAEEGKVA 121
Query: 219 M 219
+
Sbjct: 122 L 122
>gi|124025289|ref|YP_001014405.1| ribosome recycling factor [Prochlorococcus marinus str. NATL1A]
gi|166230815|sp|A2C0Y0.1|RRF_PROM1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|123960357|gb|ABM75140.1| Ribosome recycling factor [Prochlorococcus marinus str. NATL1A]
Length = 182
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 67/122 (54%), Positives = 94/122 (77%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
+++K M ++++ + NFN++RTGR+N ++LD+I VEYYG+ LKS+A I TPDS ++
Sbjct: 4 QELKNTMSKSVEAAQRNFNTIRTGRANTSLLDRISVEYYGAETPLKSLATITTPDSQTIA 63
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
IQP+D SL SIEKAI +SDLG TPNNDG++IR+ +P LT ERRKE K+ +K AEEGKV
Sbjct: 64 IQPFDLGSLASIEKAIATSDLGFTPNNDGKIIRINVPPLTEERRKEFCKLASKYAEEGKV 123
Query: 218 VM 219
+
Sbjct: 124 AL 125
>gi|254415746|ref|ZP_05029504.1| ribosome recycling factor [Coleofasciculus chthonoplastes PCC 7420]
gi|196177452|gb|EDX72458.1| ribosome recycling factor [Coleofasciculus chthonoplastes PCC 7420]
Length = 173
Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 66/114 (57%), Positives = 92/114 (80%)
Query: 104 MERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDK 163
M++ ++ + FN++RTGR+N ++LD++ VEYYGSP LKS+A INTPD++++ IQPYDK
Sbjct: 1 MKKAVEATQRGFNTIRTGRANASLLDRVMVEYYGSPTPLKSLASINTPDATTITIQPYDK 60
Query: 164 SSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
S+L IEK+I SD+G+TPNNDG+V+RL +P LTSERR+E K+ K AEEGKV
Sbjct: 61 STLTLIEKSISLSDIGLTPNNDGQVVRLNIPPLTSERRQEFVKMAGKLAEEGKV 114
>gi|384246873|gb|EIE20361.1| ribosome recycling factor [Coccomyxa subellipsoidea C-169]
Length = 174
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 64/117 (54%), Positives = 97/117 (82%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
RME++++ + +F +VRTGR+ P MLD+I+VEYYG+ LK +A ++ P++S L+IQPYD
Sbjct: 3 RMEKSLESTKGSFATVRTGRATPGMLDRIQVEYYGAMTPLKQLATLSAPEASQLVIQPYD 62
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
K+S+ SIEKAI++SDLG+TP NDG +IR+ +PQLT++RRKE++K+V+K E+GKV +
Sbjct: 63 KTSIPSIEKAIMTSDLGLTPGNDGNLIRINVPQLTADRRKEMAKLVSKLGEDGKVAL 119
>gi|116072186|ref|ZP_01469453.1| ribosome releasing factor [Synechococcus sp. BL107]
gi|116064708|gb|EAU70467.1| ribosome releasing factor [Synechococcus sp. BL107]
Length = 182
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 67/122 (54%), Positives = 96/122 (78%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
KD++A M ++++ + NFN++RTGR+N ++LD+I VEYYG+ LKS+A ++TPDS ++
Sbjct: 4 KDLEASMHKSLEATQRNFNTIRTGRANSSLLDRISVEYYGAETPLKSLATLSTPDSQTIQ 63
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
IQP+D S+L SIEKAI S+LG TPNNDG+VIR+ +P LT ERRKE K+ ++ AEEGKV
Sbjct: 64 IQPFDISALASIEKAIAMSELGFTPNNDGKVIRINVPPLTEERRKEFCKLASRYAEEGKV 123
Query: 218 VM 219
+
Sbjct: 124 AL 125
>gi|33863513|ref|NP_895073.1| ribosome recycling factor [Prochlorococcus marinus str. MIT 9313]
gi|39932089|sp|Q7V6C1.1|RRF_PROMM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|33640962|emb|CAE21420.1| Ribosome recycling factor [Prochlorococcus marinus str. MIT 9313]
Length = 182
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 95/122 (77%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
+++K M ++++ + NF ++RTGR+NP++LD+I VEYYG+ LKS+A I+TPDS ++
Sbjct: 4 QELKDNMHKSVEATQRNFATIRTGRANPSLLDRINVEYYGTETPLKSLATISTPDSQTIA 63
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
IQP+D S+ IEKAI +SDLG+TPNNDG++IR+ +P LT ERRKE K+ A+ AEEGKV
Sbjct: 64 IQPFDNGSMGLIEKAIATSDLGLTPNNDGKIIRINVPPLTEERRKEFCKLAARYAEEGKV 123
Query: 218 VM 219
+
Sbjct: 124 AL 125
>gi|161567479|ref|YP_321148.2| ribosome recycling factor [Anabaena variabilis ATCC 29413]
Length = 187
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 67/121 (55%), Positives = 97/121 (80%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+ +++M+ T++ + FN++RTGR+N ++LDK+ V+YYGSP LKS+A I+TPD++++ I
Sbjct: 10 EAESKMQHTVEATQRAFNTIRTGRANASLLDKVLVDYYGSPTPLKSLANISTPDATTIQI 69
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QPYDK+SL IEKAI SD+G+TP+NDG IRL +P LTS+RRKEL K+ AK AEEG+V
Sbjct: 70 QPYDKTSLNIIEKAISLSDVGLTPSNDGSAIRLNIPPLTSDRRKELVKLAAKYAEEGRVA 129
Query: 219 M 219
+
Sbjct: 130 I 130
>gi|317969623|ref|ZP_07971013.1| ribosome recycling factor [Synechococcus sp. CB0205]
Length = 179
Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 69/121 (57%), Positives = 96/121 (79%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D++A M +++D + FN++RTGR+N ++LDKI+VEYYG+ LKS+A I+TPDSS++ +
Sbjct: 2 DLEASMRKSVDSTQRTFNTIRTGRANASLLDKIQVEYYGADTPLKSLATISTPDSSTIQL 61
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QP+D SSL IEKAI SDLG+T NNDG++IR+ +P LT +RRKEL K+ AK AEEGKV
Sbjct: 62 QPFDGSSLGLIEKAISMSDLGLTCNNDGKLIRINIPPLTEDRRKELCKLAAKYAEEGKVA 121
Query: 219 M 219
+
Sbjct: 122 L 122
>gi|302837099|ref|XP_002950109.1| hypothetical protein VOLCADRAFT_80962 [Volvox carteri f.
nagariensis]
gi|300264582|gb|EFJ48777.1| hypothetical protein VOLCADRAFT_80962 [Volvox carteri f.
nagariensis]
Length = 266
Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 64/126 (50%), Positives = 95/126 (75%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+ +KD RM++ +++V FN++RTGR+NPA+LDKI V+Y+G+P LK + + PDS
Sbjct: 88 ADAKKDADERMKKCLNVVADGFNTIRTGRANPAILDKITVDYFGAPTPLKQMGAVTVPDS 147
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
+L+I P+D+S+LK IE+AI SD+G+ PNNDGE IRL +P +T ERRK+L+K V+K E
Sbjct: 148 QTLMIAPFDRSTLKDIERAIQESDIGINPNNDGERIRLVMPPMTQERRKDLAKQVSKMTE 207
Query: 214 EGKVVM 219
+GKV +
Sbjct: 208 DGKVAV 213
>gi|78212260|ref|YP_381039.1| ribosome recycling factor [Synechococcus sp. CC9605]
gi|123578616|sp|Q3ALP8.1|RRF_SYNSC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|78196719|gb|ABB34484.1| ribosome recycling factor [Synechococcus sp. CC9605]
Length = 182
Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 66/122 (54%), Positives = 96/122 (78%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
+D++A M ++++ + NFN++RTGR+N ++LD+I VEYYG+ LKS+A ++TPDS ++
Sbjct: 4 QDLEASMRKSVEATQRNFNTIRTGRANSSLLDRISVEYYGAETPLKSLATLSTPDSQTIQ 63
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
IQP+D S+L SIEKAI S+LG TPNNDG++IR+ +P LT ERRKE K+ +K AEEGKV
Sbjct: 64 IQPFDISALASIEKAIAMSELGFTPNNDGKIIRINVPPLTEERRKEFCKLASKYAEEGKV 123
Query: 218 VM 219
+
Sbjct: 124 AL 125
>gi|443312882|ref|ZP_21042496.1| ribosome recycling factor [Synechocystis sp. PCC 7509]
gi|442777032|gb|ELR87311.1| ribosome recycling factor [Synechocystis sp. PCC 7509]
Length = 182
Score = 149 bits (377), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 65/116 (56%), Positives = 92/116 (79%)
Query: 104 MERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDK 163
M++++D +FN++RTGR+N ++LDK+ V+YYG+P LK++A IN PDSS++LIQPYD+
Sbjct: 10 MQKSVDATLRSFNTIRTGRANASLLDKVTVDYYGAPTGLKALANINAPDSSTILIQPYDR 69
Query: 164 SSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
++L IEKAI SD+G+T NNDG VIRL +P LTS+RRKE K+ K AEEG+V +
Sbjct: 70 TTLNMIEKAISLSDVGLTTNNDGTVIRLNIPPLTSDRRKEFVKLATKYAEEGRVAI 125
>gi|33866285|ref|NP_897844.1| ribosome recycling factor [Synechococcus sp. WH 8102]
gi|39932068|sp|Q7U5F4.1|RRF_SYNPX RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|33639260|emb|CAE08268.1| ribosome recycling factor protein Rrf [Synechococcus sp. WH 8102]
Length = 182
Score = 149 bits (377), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 66/122 (54%), Positives = 96/122 (78%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
+D++A M ++++ + NFN++RTGR+N ++LD+I VEYYG+ LKS+A ++TPDS ++
Sbjct: 4 QDLEASMRKSVEATQRNFNTIRTGRANSSLLDRISVEYYGAETPLKSLATLSTPDSQTIQ 63
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
IQP+D S+L SIEKAI S+LG TPNNDG++IR+ +P LT ERRKE K+ +K AEEGKV
Sbjct: 64 IQPFDISALASIEKAIAMSELGFTPNNDGKIIRINVPPLTEERRKEFCKLASKYAEEGKV 123
Query: 218 VM 219
+
Sbjct: 124 AL 125
>gi|260435842|ref|ZP_05789812.1| ribosome recycling factor [Synechococcus sp. WH 8109]
gi|260413716|gb|EEX07012.1| ribosome recycling factor [Synechococcus sp. WH 8109]
Length = 182
Score = 149 bits (377), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 66/122 (54%), Positives = 96/122 (78%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
+D++A M ++++ + NFN++RTGR+N ++LD+I VEYYG+ LKS+A ++TPDS ++
Sbjct: 4 QDLEASMRKSVEATQRNFNTIRTGRANSSLLDRISVEYYGADTPLKSLATLSTPDSQTIQ 63
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
IQP+D S+L SIEKAI S+LG TPNNDG++IR+ +P LT ERRKE K+ +K AEEGKV
Sbjct: 64 IQPFDISALASIEKAIAMSELGFTPNNDGKIIRINVPPLTEERRKEFCKLASKYAEEGKV 123
Query: 218 VM 219
+
Sbjct: 124 AL 125
>gi|218439649|ref|YP_002377978.1| ribosome recycling factor [Cyanothece sp. PCC 7424]
gi|226703257|sp|B7K7R4.1|RRF_CYAP7 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|218172377|gb|ACK71110.1| ribosome recycling factor [Cyanothece sp. PCC 7424]
Length = 182
Score = 149 bits (377), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 66/121 (54%), Positives = 96/121 (79%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+V+ M++TI+ + +FN++RTGR+N A+LD++ V+YYG+ LKS+A I TPD++++ I
Sbjct: 5 EVQDNMQKTIESTQRSFNTIRTGRANSALLDRVMVDYYGTETPLKSLANITTPDATTIAI 64
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QPYD+ S+ IEKAI SD+G+TPNNDG++IRL +P LT+ERRKEL K+ K AEEGKV
Sbjct: 65 QPYDRGSMGQIEKAIQLSDIGLTPNNDGQMIRLNIPPLTTERRKELVKLAGKLAEEGKVA 124
Query: 219 M 219
+
Sbjct: 125 I 125
>gi|124022470|ref|YP_001016777.1| ribosome recycling factor [Prochlorococcus marinus str. MIT 9303]
gi|123962756|gb|ABM77512.1| Ribosome recycling factor [Prochlorococcus marinus str. MIT 9303]
Length = 173
Score = 149 bits (377), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 65/116 (56%), Positives = 91/116 (78%)
Query: 104 MERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDK 163
M ++++ + NF ++RTGR+NP++LD+I VEYYG+ LKS+A I+TPDS ++ IQP+D
Sbjct: 1 MHKSVEATQRNFATIRTGRANPSLLDRINVEYYGTETPLKSLATISTPDSQTIAIQPFDN 60
Query: 164 SSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
S+ IEKAI +SDLG+TPNNDG++IR+ +P LT ERRKE K+ AK AEEGKV +
Sbjct: 61 GSMGLIEKAIATSDLGLTPNNDGKIIRINVPPLTEERRKEFCKLAAKYAEEGKVAL 116
>gi|220909994|ref|YP_002485305.1| ribosome recycling factor [Cyanothece sp. PCC 7425]
gi|254809507|sp|B8HL79.1|RRF_CYAP4 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|219866605|gb|ACL46944.1| ribosome recycling factor [Cyanothece sp. PCC 7425]
Length = 182
Score = 149 bits (377), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 68/119 (57%), Positives = 95/119 (79%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
DV+ M+++++ + FN++RTGR+N ++LD++ VEYYG+ L+S+A I+TPDSS++ I
Sbjct: 5 DVEDHMQKSVEATQRAFNTIRTGRANTSLLDRVTVEYYGAETPLRSLANISTPDSSTIAI 64
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
QP+D++SL IEKAI SDLG+TPNNDG VIRL +P LTS+RRKEL K +K AEEGKV
Sbjct: 65 QPFDRNSLNLIEKAISMSDLGLTPNNDGTVIRLNIPPLTSDRRKELVKTASKLAEEGKV 123
>gi|78185216|ref|YP_377651.1| ribosome recycling factor [Synechococcus sp. CC9902]
gi|123580806|sp|Q3AV97.1|RRF_SYNS9 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|78169510|gb|ABB26607.1| ribosome recycling factor [Synechococcus sp. CC9902]
Length = 182
Score = 149 bits (376), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 67/122 (54%), Positives = 95/122 (77%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
KD++A M ++++ + NFN++RTGR+N ++LD+I VEYYG+ LKS+A ++TPDS ++
Sbjct: 4 KDLEASMRKSLEATQRNFNTIRTGRANSSLLDRISVEYYGADTPLKSLATLSTPDSQTIQ 63
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
IQP+D S L +IEKAI S+LG TPNNDG+VIR+ +P LT ERRKE K+ +K AEEGKV
Sbjct: 64 IQPFDISGLAAIEKAIAMSELGFTPNNDGKVIRINVPPLTEERRKEFCKMASKYAEEGKV 123
Query: 218 VM 219
+
Sbjct: 124 AL 125
>gi|284044967|ref|YP_003395307.1| ribosome recycling factor [Conexibacter woesei DSM 14684]
gi|283949188|gb|ADB51932.1| ribosome recycling factor [Conexibacter woesei DSM 14684]
Length = 185
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 66/120 (55%), Positives = 94/120 (78%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
+D + RM ++++ R F SVRTGR+ PA+LD+I VEYYG+ LK +A IN P++ L
Sbjct: 7 QDARERMSKSVESTRHEFGSVRTGRATPALLDRIMVEYYGANTPLKQLATINAPEARMLS 66
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
+QP+DKSS+K+IEKAI+ SD+G+TPNNDG +IRL++P+LT ERR++L KVV AEEG++
Sbjct: 67 VQPFDKSSIKAIEKAIMESDVGLTPNNDGNLIRLSIPELTEERRRQLVKVVRNIAEEGRI 126
>gi|75700577|gb|ABA20253.1| ribosome recycling factor [Anabaena variabilis ATCC 29413]
Length = 173
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 67/116 (57%), Positives = 93/116 (80%)
Query: 104 MERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDK 163
M+ T++ + FN++RTGR+N ++LDK+ V+YYGSP LKS+A I+TPD++++ IQPYDK
Sbjct: 1 MQHTVEATQRAFNTIRTGRANASLLDKVLVDYYGSPTPLKSLANISTPDATTIQIQPYDK 60
Query: 164 SSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
+SL IEKAI SD+G+TP+NDG IRL +P LTS+RRKEL K+ AK AEEG+V +
Sbjct: 61 TSLNIIEKAISLSDVGLTPSNDGSAIRLNIPPLTSDRRKELVKLAAKYAEEGRVAI 116
>gi|416381881|ref|ZP_11684253.1| Ribosome recycling factor [Crocosphaera watsonii WH 0003]
gi|357265462|gb|EHJ14223.1| Ribosome recycling factor [Crocosphaera watsonii WH 0003]
Length = 181
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 64/121 (52%), Positives = 96/121 (79%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D+K M+++++ + +FN++RTGR+NPA+LD++ V+YYG+ L +A I+TP+++ ++I
Sbjct: 4 DLKDNMQKSVEATQRSFNTIRTGRANPAILDRVTVDYYGTETPLNQLANISTPEATMIMI 63
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QPYDK S+ IEKAI SD+G+TPNNDG+VIRL +P LT ERRK+L K+ +K AEEGKV
Sbjct: 64 QPYDKGSMGQIEKAIQMSDVGLTPNNDGQVIRLNIPPLTEERRKDLVKLASKMAEEGKVA 123
Query: 219 M 219
+
Sbjct: 124 I 124
>gi|186686172|ref|YP_001869368.1| ribosome recycling factor [Nostoc punctiforme PCC 73102]
gi|238691203|sp|B2IVW4.1|RRF_NOSP7 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|186468624|gb|ACC84425.1| ribosome recycling factor [Nostoc punctiforme PCC 73102]
Length = 182
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 66/121 (54%), Positives = 97/121 (80%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D K++M+ +++ + FN++RTGR+N ++LDK+ V+YYGSP LKS+A I+TPD+S++LI
Sbjct: 5 DAKSKMQSSVESTQRAFNTIRTGRANASLLDKVLVDYYGSPTPLKSLANISTPDASTILI 64
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QPY++++L IEKAI SD+G+TP+NDG VIRL +P LTS+RRKE K+ K AEEG+V
Sbjct: 65 QPYERNTLNIIEKAISLSDVGLTPSNDGSVIRLNIPPLTSDRRKEFVKMATKYAEEGRVA 124
Query: 219 M 219
+
Sbjct: 125 I 125
>gi|323701848|ref|ZP_08113518.1| ribosome recycling factor [Desulfotomaculum nigrificans DSM 574]
gi|333923698|ref|YP_004497278.1| ribosome-recycling factor [Desulfotomaculum carboxydivorans
CO-1-SRB]
gi|323533152|gb|EGB23021.1| ribosome recycling factor [Desulfotomaculum nigrificans DSM 574]
gi|333749259|gb|AEF94366.1| Ribosome-recycling factor [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 184
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 67/116 (57%), Positives = 92/116 (79%)
Query: 104 MERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDK 163
M++T+++VR F S+R GR+ PA+LDK+ V YYG+P L +A I+ P++ SL+IQP+DK
Sbjct: 13 MKKTVEVVRKEFASLRAGRATPALLDKVVVSYYGTPTPLNQLANISVPEARSLVIQPWDK 72
Query: 164 SSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
S+L IE+AI+ SDLG+TP +DG VIRLT+PQLT ERR EL KVV K+AEEG+V +
Sbjct: 73 SALPEIERAILKSDLGITPTSDGTVIRLTIPQLTQERRAELVKVVKKKAEEGRVAI 128
>gi|354554151|ref|ZP_08973456.1| Ribosome-recycling factor [Cyanothece sp. ATCC 51472]
gi|353553830|gb|EHC23221.1| Ribosome-recycling factor [Cyanothece sp. ATCC 51472]
Length = 181
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 64/121 (52%), Positives = 96/121 (79%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D+K M+++++ + +FN++RTGR+N ++LD++ VEYYG+ L +A I+TPD+++++I
Sbjct: 4 DLKENMQKSVEATQRSFNTIRTGRANASILDRVTVEYYGTETPLYQLANISTPDATTIMI 63
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QPYDK S+ IEKAI SD+G+TPNNDG+VIRL +P LT ERRK+L K+ +K AEEGKV
Sbjct: 64 QPYDKGSMGQIEKAIQMSDVGLTPNNDGQVIRLNIPPLTEERRKDLVKLASKMAEEGKVA 123
Query: 219 M 219
+
Sbjct: 124 I 124
>gi|172038505|ref|YP_001805006.1| ribosome recycling factor [Cyanothece sp. ATCC 51142]
gi|226749927|sp|B1X0Q1.1|RRF_CYAA5 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|171699959|gb|ACB52940.1| ribosome recycling factor [Cyanothece sp. ATCC 51142]
Length = 182
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 64/121 (52%), Positives = 96/121 (79%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D+K M+++++ + +FN++RTGR+N ++LD++ VEYYG+ L +A I+TPD+++++I
Sbjct: 5 DLKENMQKSVEATQRSFNTIRTGRANASILDRVTVEYYGTETPLYQLANISTPDATTIMI 64
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QPYDK S+ IEKAI SD+G+TPNNDG+VIRL +P LT ERRK+L K+ +K AEEGKV
Sbjct: 65 QPYDKGSMGQIEKAIQMSDVGLTPNNDGQVIRLNIPPLTEERRKDLVKLASKMAEEGKVA 124
Query: 219 M 219
+
Sbjct: 125 I 125
>gi|332705597|ref|ZP_08425673.1| ribosome recycling factor [Moorea producens 3L]
gi|332355389|gb|EGJ34853.1| ribosome recycling factor [Moorea producens 3L]
Length = 182
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 67/119 (56%), Positives = 93/119 (78%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
DV+ M++ ++ + FN++RTGR++ ++LD++ VEYYG+P LKS+A INTPD+S++ I
Sbjct: 5 DVETSMQKAVEATQRAFNTIRTGRASTSLLDRVMVEYYGTPTPLKSLANINTPDASTITI 64
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
QPYDKS L IEKAI SDL + PNN+GEV+RL +P LTSERRKE K+ +K AEEG+V
Sbjct: 65 QPYDKSMLSQIEKAITLSDLDLPPNNNGEVVRLNIPPLTSERRKEFVKMASKFAEEGRV 123
>gi|88807685|ref|ZP_01123197.1| ribosome releasing factor [Synechococcus sp. WH 7805]
gi|88788899|gb|EAR20054.1| ribosome releasing factor [Synechococcus sp. WH 7805]
Length = 182
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 66/121 (54%), Positives = 95/121 (78%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D+++ M ++++ + NFN++RTGR+N ++LD+I VEYYG+ LKS+A ++TPDS ++ I
Sbjct: 5 DLESSMRKSVEATQRNFNTIRTGRANSSLLDRISVEYYGADTPLKSLATLSTPDSQTIQI 64
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QP+D S+L SIEKAI S+LG TPNNDG+VIR+ +P LT ERRKE K+ +K AEEGKV
Sbjct: 65 QPFDISALASIEKAIAMSELGFTPNNDGKVIRINVPPLTEERRKEFCKLASKYAEEGKVA 124
Query: 219 M 219
+
Sbjct: 125 L 125
>gi|154500382|ref|ZP_02038420.1| hypothetical protein BACCAP_04049 [Bacteroides capillosus ATCC
29799]
gi|150270887|gb|EDM98170.1| ribosome recycling factor [Pseudoflavonifractor capillosus ATCC
29799]
Length = 184
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/122 (56%), Positives = 91/122 (74%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K+ A+M++T+D+V+++F SVR GR+N A+LDKI V+YYG P L + I++PD SL+
Sbjct: 6 KEFDAKMQKTVDVVKSDFASVRAGRANAAVLDKITVDYYGVPTPLNQVGGISSPDPRSLV 65
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
IQP+D LK IEKAI +SDLG+ P NDG VIRL PQLT ERRK+L+K V K AE GKV
Sbjct: 66 IQPWDTKLLKDIEKAIQTSDLGINPQNDGRVIRLNFPQLTEERRKDLTKQVRKYAEAGKV 125
Query: 218 VM 219
+
Sbjct: 126 AI 127
>gi|318041138|ref|ZP_07973094.1| ribosome recycling factor [Synechococcus sp. CB0101]
Length = 179
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/121 (56%), Positives = 96/121 (79%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+++A M +++D + FN++RTGR+N ++LDKI+VEYYG+ LKS+A I+TPDSS++ +
Sbjct: 2 ELEASMRKSVDSTQRTFNTIRTGRANASLLDKIQVEYYGADTPLKSLATISTPDSSTIQL 61
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QP+D SSL IEKAI SDLG+T NNDG+VIR+ +P LT +RRK+L K+ AK AEEGKV
Sbjct: 62 QPFDASSLSLIEKAISMSDLGLTCNNDGKVIRINIPPLTEDRRKDLCKLAAKYAEEGKVA 121
Query: 219 M 219
+
Sbjct: 122 L 122
>gi|33861078|ref|NP_892639.1| ribosome recycling factor [Prochlorococcus marinus subsp. pastoris
str. CCMP1986]
gi|39932081|sp|Q7V2F9.1|RRF_PROMP RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|33639810|emb|CAE18980.1| Ribosome recycling factor [Prochlorococcus marinus subsp. pastoris
str. CCMP1986]
Length = 182
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 66/123 (53%), Positives = 98/123 (79%)
Query: 97 EKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSL 156
E+++++ M ++++ + NFN++RTGR+N ++LD+I VEYYG+ +KS+A I+T DS ++
Sbjct: 3 EQEIQSSMNKSVEATQRNFNTIRTGRANASLLDRISVEYYGAETPIKSLASISTIDSQTI 62
Query: 157 LIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGK 216
IQP+D SSL++IEKAI SDLG+TPNNDG+VIR+ +P LT ERRKE K+ +K AEEGK
Sbjct: 63 SIQPFDISSLQTIEKAISVSDLGITPNNDGKVIRINVPPLTEERRKEFCKLASKYAEEGK 122
Query: 217 VVM 219
V +
Sbjct: 123 VAL 125
>gi|126657954|ref|ZP_01729107.1| ribosome releasing factor [Cyanothece sp. CCY0110]
gi|126620894|gb|EAZ91610.1| ribosome releasing factor [Cyanothece sp. CCY0110]
Length = 181
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 64/121 (52%), Positives = 95/121 (78%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D+K M+++++ + +FN++RTGR+N ++LD++ VEYYG+ L +A I+TPD+++++I
Sbjct: 4 DLKDNMQKSVEATQRSFNTIRTGRANASILDRVTVEYYGTETPLYQLANISTPDATTIMI 63
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QPYDK S+ IEKAI SD+G+TPNNDG VIRL +P LT ERRK+L K+ +K AEEGKV
Sbjct: 64 QPYDKGSMGQIEKAIQMSDVGLTPNNDGNVIRLNIPPLTEERRKDLVKLASKMAEEGKVA 123
Query: 219 M 219
+
Sbjct: 124 I 124
>gi|158320548|ref|YP_001513055.1| ribosome recycling factor [Alkaliphilus oremlandii OhILAs]
gi|166991552|sp|A8MHH2.1|RRF_ALKOO RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|158140747|gb|ABW19059.1| ribosome recycling factor [Alkaliphilus oremlandii OhILAs]
Length = 185
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 69/127 (54%), Positives = 95/127 (74%)
Query: 93 KSSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPD 152
K I K+++ +M +TI+ ++ S+R GR+NPAMLD+I VEYYGSP +K IA I P+
Sbjct: 2 KMEIHKNLEEKMNKTINALKDELASIRAGRANPAMLDRIVVEYYGSPTPIKQIAAITAPE 61
Query: 153 SSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQA 212
+ IQPYD S+L SIEKAI+ SDLG+ P+NDG++IR+ +PQLT ERRKEL+KV K +
Sbjct: 62 PRIISIQPYDGSALSSIEKAILQSDLGVNPSNDGKLIRIIVPQLTEERRKELTKVAKKTS 121
Query: 213 EEGKVVM 219
E+ KVV+
Sbjct: 122 EDAKVVL 128
>gi|434387099|ref|YP_007097710.1| ribosome recycling factor [Chamaesiphon minutus PCC 6605]
gi|428018089|gb|AFY94183.1| ribosome recycling factor [Chamaesiphon minutus PCC 6605]
Length = 182
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 63/119 (52%), Positives = 93/119 (78%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
DV+ M++ ++ V +FN++RTGR++ ++LD++ ++YYG+P LKS+A I TPDS+++ I
Sbjct: 5 DVEGHMQKAVESVGRSFNTIRTGRASTSLLDRVTIDYYGTPTPLKSLANIGTPDSTTITI 64
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
QP+D+SS+ +IEKAI SD+G+TPNNDG IRL +P LT ERRKE K +K AEEGK+
Sbjct: 65 QPFDRSSMSTIEKAISLSDIGLTPNNDGSTIRLNIPPLTGERRKEFVKQASKYAEEGKI 123
>gi|425469034|ref|ZP_18848001.1| Ribosome recycling factor (Ribosome-releasing factor) (RRF)
[Microcystis aeruginosa PCC 9701]
gi|389883904|emb|CCI35744.1| Ribosome recycling factor (Ribosome-releasing factor) (RRF)
[Microcystis aeruginosa PCC 9701]
Length = 182
Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 66/121 (54%), Positives = 97/121 (80%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+V+ M++T++ + FN++RTGR+N ++LD+I VEYYG LKS+A I+TPD++++ I
Sbjct: 5 EVQDHMQKTVESTQRGFNTIRTGRANASLLDRIMVEYYGMETPLKSLATISTPDATTIAI 64
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QP+D++S+ +IEKAI SD+G+TP+NDG+ IRL +P LTS+RRKEL K VAK AEEGKV
Sbjct: 65 QPFDRTSMGAIEKAISLSDVGLTPSNDGQTIRLNIPPLTSDRRKELVKSVAKLAEEGKVA 124
Query: 219 M 219
+
Sbjct: 125 I 125
>gi|443325927|ref|ZP_21054599.1| ribosome recycling factor [Xenococcus sp. PCC 7305]
gi|442794468|gb|ELS03883.1| ribosome recycling factor [Xenococcus sp. PCC 7305]
Length = 182
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 65/121 (53%), Positives = 96/121 (79%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
++K+ ME+TI+ + +FN++RTGR++ ++LD++ V+YYGS L+S+A I+ PDS+++ I
Sbjct: 5 ELKSNMEKTIEATQRSFNTIRTGRASTSLLDRVMVDYYGSETPLQSLANISVPDSTTITI 64
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QPYDK S+ IE+AI SD+G+TPNNDG+ IRL +P LT +RRKEL KV +K AEEGKV
Sbjct: 65 QPYDKGSMAQIERAISMSDIGLTPNNDGQKIRLIIPALTKDRRKELVKVASKLAEEGKVA 124
Query: 219 M 219
+
Sbjct: 125 L 125
>gi|427417313|ref|ZP_18907496.1| ribosome recycling factor [Leptolyngbya sp. PCC 7375]
gi|425760026|gb|EKV00879.1| ribosome recycling factor [Leptolyngbya sp. PCC 7375]
Length = 185
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 66/121 (54%), Positives = 92/121 (76%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
DV+ M++ ++ + +FN++RTGR+N ++LD+I V+YYG+P L+S+A I+TPD S+L+I
Sbjct: 8 DVEQAMQKAVEATKRSFNTIRTGRANASLLDRISVDYYGAPTPLQSMANISTPDPSTLMI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QPYD S L IEKAI SD+G+ PNNDG VIRL +P LT+ERRKE K K AEEG+V
Sbjct: 68 QPYDASILSQIEKAISLSDVGLVPNNDGSVIRLNIPPLTTERRKEFVKQAGKYAEEGRVA 127
Query: 219 M 219
+
Sbjct: 128 I 128
>gi|87302617|ref|ZP_01085434.1| ribosome releasing factor [Synechococcus sp. WH 5701]
gi|87282961|gb|EAQ74918.1| ribosome releasing factor [Synechococcus sp. WH 5701]
Length = 179
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 61/121 (50%), Positives = 95/121 (78%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D+ A M ++++ + FN++RTGR+NP++LDKI +EYYG+ L+S+A ++TPDS ++ I
Sbjct: 2 DLDASMRKSLEATQRTFNTIRTGRANPSLLDKITIEYYGAETPLRSVASLSTPDSQTIQI 61
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QP+D +++ SIEKAI SDLG+TPNNDG +IR+ +P LT++RRKE K+ ++ AE+GKV
Sbjct: 62 QPFDSAAMASIEKAIAMSDLGLTPNNDGRLIRINIPPLTADRRKEFCKLASRYAEDGKVA 121
Query: 219 M 219
+
Sbjct: 122 L 122
>gi|304404282|ref|ZP_07385944.1| ribosome recycling factor [Paenibacillus curdlanolyticus YK9]
gi|304347260|gb|EFM13092.1| ribosome recycling factor [Paenibacillus curdlanolyticus YK9]
Length = 184
Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 66/125 (52%), Positives = 94/125 (75%)
Query: 95 SIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSS 154
+I+KD + RME+ I ++ + ++R GR+ PA+LD+I+VEYYG+ + +A INTPDS
Sbjct: 4 AIKKDAEERMEKAIGALKRDLATLRAGRATPALLDRIQVEYYGAMTPVNQLANINTPDSR 63
Query: 155 SLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEE 214
+LL+QP+DKSSL +IEKAI+ SDLG+TP+NDG IRL++P LT ERR EL K+ K EE
Sbjct: 64 TLLLQPWDKSSLAAIEKAIMKSDLGLTPSNDGSTIRLSIPALTEERRSELVKLTKKFGEE 123
Query: 215 GKVVM 219
K+ +
Sbjct: 124 AKIAV 128
>gi|148238974|ref|YP_001224361.1| ribosome recycling factor [Synechococcus sp. WH 7803]
gi|166231523|sp|A5GJE9.1|RRF_SYNPW RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|147847513|emb|CAK23064.1| Ribosome recycling factor [Synechococcus sp. WH 7803]
Length = 182
Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 65/121 (53%), Positives = 94/121 (77%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D+++ M ++++ + NFN++RTGR+N ++LD+I VEYYG+ LKS+A ++TPDS ++ I
Sbjct: 5 DLESSMRKSVEATQRNFNTIRTGRANSSLLDRISVEYYGAETPLKSLATLSTPDSQTIQI 64
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QP+D S+L IEKAI S+LG TPNNDG+VIR+ +P LT ERRKE K+ +K AEEGKV
Sbjct: 65 QPFDISALALIEKAIAMSELGFTPNNDGKVIRINVPPLTEERRKEFCKLASKYAEEGKVA 124
Query: 219 M 219
+
Sbjct: 125 L 125
>gi|253573556|ref|ZP_04850899.1| ribosome recycling factor [Paenibacillus sp. oral taxon 786 str.
D14]
gi|251847084|gb|EES75089.1| ribosome recycling factor [Paenibacillus sp. oral taxon 786 str.
D14]
Length = 184
Score = 145 bits (367), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 68/125 (54%), Positives = 92/125 (73%)
Query: 95 SIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSS 154
+I+K + RME+ I +R + +++R GR+ P++LD+I+V+YYGSP + +A INTPDS
Sbjct: 4 TIKKHAEERMEKAIQALRRDLSTLRAGRATPSLLDRIQVDYYGSPTPINQLANINTPDSR 63
Query: 155 SLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEE 214
+LLIQP+DKSSL IE+AI SDLG+TP NDG IRLT+P LT ERR EL K+ K EE
Sbjct: 64 TLLIQPWDKSSLSEIERAIQKSDLGLTPANDGSSIRLTIPALTEERRIELVKMTKKFGEE 123
Query: 215 GKVVM 219
KV +
Sbjct: 124 AKVAI 128
>gi|166365795|ref|YP_001658068.1| ribosome recycling factor [Microcystis aeruginosa NIES-843]
gi|425466445|ref|ZP_18845743.1| Ribosome recycling factor (Ribosome-releasing factor) (RRF)
[Microcystis aeruginosa PCC 9809]
gi|189044061|sp|B0JKT7.1|RRF_MICAN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|166088168|dbj|BAG02876.1| ribosome releasing factor [Microcystis aeruginosa NIES-843]
gi|389831005|emb|CCI26571.1| Ribosome recycling factor (Ribosome-releasing factor) (RRF)
[Microcystis aeruginosa PCC 9809]
Length = 182
Score = 145 bits (367), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 65/121 (53%), Positives = 98/121 (80%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+V+ +M++T++ + FN++RTGR+N ++LD+I VEYYG LKS+A I+TPD++++ I
Sbjct: 5 EVQDQMQKTVESTQRAFNTIRTGRANASLLDRIVVEYYGMETPLKSLATISTPDATTIAI 64
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QP+D++S+ +IEKAI SD+G+TP+NDG+ IRL +P LTS+RRKEL K+ AK AEEGKV
Sbjct: 65 QPFDRTSMGAIEKAISLSDVGLTPSNDGQTIRLNIPPLTSDRRKELVKLAAKLAEEGKVA 124
Query: 219 M 219
+
Sbjct: 125 I 125
>gi|159903064|ref|YP_001550408.1| ribosome recycling factor [Prochlorococcus marinus str. MIT 9211]
gi|226749934|sp|A9BEE4.1|RRF_PROM4 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|159888240|gb|ABX08454.1| Ribosome recycling factor [Prochlorococcus marinus str. MIT 9211]
Length = 182
Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 66/124 (53%), Positives = 95/124 (76%)
Query: 96 IEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSS 155
I K+++ M ++++ + NFN++RTGR+N ++LD++ VEYYG+ LKS+A I+TPDS +
Sbjct: 2 ITKELEQNMRKSVEAAQRNFNTIRTGRANTSLLDRLTVEYYGADTPLKSLATISTPDSQT 61
Query: 156 LLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEG 215
+ IQP+D SSL IEK+I SDLG TPNNDG++IR+ +P LT ERRKE K+ +K AEEG
Sbjct: 62 ISIQPFDLSSLVLIEKSIAMSDLGFTPNNDGKIIRINIPPLTEERRKEFCKLASKYAEEG 121
Query: 216 KVVM 219
KV +
Sbjct: 122 KVAL 125
>gi|428307995|ref|YP_007144820.1| ribosome recycling factor [Crinalium epipsammum PCC 9333]
gi|428249530|gb|AFZ15310.1| ribosome recycling factor [Crinalium epipsammum PCC 9333]
Length = 182
Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 63/121 (52%), Positives = 94/121 (77%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
DV++ M++T++ + +FN++RTGR+N ++LD++ VEYYG+ LKS+A I+TPD+S++ I
Sbjct: 5 DVESNMQKTVEATQRSFNTIRTGRANASLLDRVTVEYYGTQTPLKSLANISTPDASTITI 64
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QP+D+ S+ IE+AI SD+G+TPNNDG IRL +P LT+ERRKE K K AEEG+V
Sbjct: 65 QPFDRGSVSVIERAISLSDVGLTPNNDGSTIRLNIPPLTTERRKEFVKFAGKYAEEGRVA 124
Query: 219 M 219
+
Sbjct: 125 I 125
>gi|425436549|ref|ZP_18816984.1| Ribosome recycling factor (Ribosome-releasing factor) (RRF)
[Microcystis aeruginosa PCC 9432]
gi|389678710|emb|CCH92453.1| Ribosome recycling factor (Ribosome-releasing factor) (RRF)
[Microcystis aeruginosa PCC 9432]
Length = 182
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 65/121 (53%), Positives = 97/121 (80%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+V+ M++T++ + FN++RTGR+N ++LD+I VEYYG LKS+A I+TPD++++ I
Sbjct: 5 EVQDHMQKTVESTQRGFNTIRTGRANASLLDRIVVEYYGMETPLKSLATISTPDATTIAI 64
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QP+D+SS+ +IEKAI SD+G+TP+NDG+ IRL +P LTS+RRKEL K+ AK +EEGKV
Sbjct: 65 QPFDRSSMGAIEKAISLSDVGLTPSNDGQTIRLNIPPLTSDRRKELVKLAAKLSEEGKVA 124
Query: 219 M 219
+
Sbjct: 125 I 125
>gi|374307840|ref|YP_005054271.1| ribosome recycling factor [Filifactor alocis ATCC 35896]
gi|291166148|gb|EFE28194.1| ribosome recycling factor [Filifactor alocis ATCC 35896]
Length = 185
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 65/121 (53%), Positives = 95/121 (78%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+++ +M +TI +++ + +R GR+NPAMLDKI V+YYGS LK +A I++PD +++I
Sbjct: 8 ELEDKMTKTISVLKEELSVIRAGRANPAMLDKISVDYYGSQTPLKQMAGISSPDPRTIVI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QP+DK++LK IEKAI++SDLG P+NDGEVIR+ +PQLT ERRKEL K+V+K E+ KV
Sbjct: 68 QPWDKTALKEIEKAILASDLGFNPSNDGEVIRINIPQLTEERRKELVKLVSKTGEQSKVA 127
Query: 219 M 219
+
Sbjct: 128 L 128
>gi|334117693|ref|ZP_08491784.1| Ribosome-recycling factor [Microcoleus vaginatus FGP-2]
gi|333460802|gb|EGK89410.1| Ribosome-recycling factor [Microcoleus vaginatus FGP-2]
Length = 182
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 62/121 (51%), Positives = 95/121 (78%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + M++ ++ + +FN++RTGR+N ++LD++ V+YYGSP +KS+A I TPD++++ I
Sbjct: 5 DAEDHMQKAVEATQRSFNTIRTGRANASLLDRVMVDYYGSPTPIKSLANIGTPDATTITI 64
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QP+D+++L SIEKAI SD+G+ PNNDG VIRL +P LTS+RR+E K+ +K AEEGKV
Sbjct: 65 QPFDRTALNSIEKAISLSDVGLVPNNDGSVIRLNIPPLTSDRRQEFVKMASKFAEEGKVA 124
Query: 219 M 219
+
Sbjct: 125 I 125
>gi|428320921|ref|YP_007118803.1| Ribosome-recycling factor [Oscillatoria nigro-viridis PCC 7112]
gi|428244601|gb|AFZ10387.1| Ribosome-recycling factor [Oscillatoria nigro-viridis PCC 7112]
Length = 182
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 62/121 (51%), Positives = 94/121 (77%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + M++ ++ + +FN++RTGR+N ++LD++ V+YYGSP +KS+A I TPD++++ I
Sbjct: 5 DAEDHMQKAVEATQRSFNTIRTGRANASLLDRVMVDYYGSPTPIKSLANIGTPDATTITI 64
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QP+D+++L SIEKAI SD+G+ PNNDG VIRL +P LTS+RR+E K+ K AEEGKV
Sbjct: 65 QPFDRTALNSIEKAISLSDVGLVPNNDGSVIRLNIPPLTSDRRQEFVKMAGKFAEEGKVA 124
Query: 219 M 219
+
Sbjct: 125 I 125
>gi|425462488|ref|ZP_18841962.1| Ribosome recycling factor (Ribosome-releasing factor) (RRF)
[Microcystis aeruginosa PCC 9808]
gi|159028125|emb|CAO89732.1| frr [Microcystis aeruginosa PCC 7806]
gi|389824464|emb|CCI26564.1| Ribosome recycling factor (Ribosome-releasing factor) (RRF)
[Microcystis aeruginosa PCC 9808]
Length = 182
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 65/121 (53%), Positives = 97/121 (80%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+V+ M++T++ + FN++RTGR+N ++LD+I VEYYG LKS+A I+TPD++++ I
Sbjct: 5 EVQDHMQKTVESTQRAFNTIRTGRANASLLDRIVVEYYGMETPLKSLATISTPDATTIAI 64
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QP+D++S+ +IEKAI SD+G+TP+NDG+ IRL +P LTS+RRKEL K+ AK AEEGKV
Sbjct: 65 QPFDRTSMGAIEKAISLSDVGLTPSNDGQTIRLNIPPLTSDRRKELVKLAAKLAEEGKVA 124
Query: 219 M 219
+
Sbjct: 125 V 125
>gi|425442269|ref|ZP_18822523.1| Ribosome recycling factor (Ribosome-releasing factor) (RRF)
[Microcystis aeruginosa PCC 9717]
gi|389716805|emb|CCH99010.1| Ribosome recycling factor (Ribosome-releasing factor) (RRF)
[Microcystis aeruginosa PCC 9717]
Length = 182
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 64/121 (52%), Positives = 98/121 (80%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+V+ M++T++ + FN++RTGR+N ++LD+I VEYYG LKS+A I+TPD++++ I
Sbjct: 5 EVQDHMQKTVESTQRAFNTIRTGRANASLLDRIVVEYYGMETPLKSLATISTPDATTIAI 64
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QP+D++S+ +IEKAI SD+G+TP+NDG++IRL +P LTS+RRKEL K+ AK +EEGKV
Sbjct: 65 QPFDRTSMGAIEKAISLSDVGLTPSNDGQIIRLNIPPLTSDRRKELVKLAAKLSEEGKVA 124
Query: 219 M 219
+
Sbjct: 125 I 125
>gi|332653365|ref|ZP_08419110.1| ribosome recycling factor [Ruminococcaceae bacterium D16]
gi|332518511|gb|EGJ48114.1| ribosome recycling factor [Ruminococcaceae bacterium D16]
Length = 184
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/117 (57%), Positives = 89/117 (76%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M +TI++V+ NF SVR GR+N +LD+I VEYYG+P L +A I++PD +L +QP+D
Sbjct: 11 KMIKTIEVVKANFASVRAGRANAGVLDRIMVEYYGTPTPLNQVAAISSPDPRTLTVQPWD 70
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
S LK+IEKAI +SDLG+ P NDG +IRL PQLT ERRKEL+K V K +EEGKV +
Sbjct: 71 ASLLKAIEKAIQTSDLGINPQNDGRLIRLAFPQLTEERRKELTKQVRKYSEEGKVAL 127
>gi|116075317|ref|ZP_01472577.1| ribosome releasing factor [Synechococcus sp. RS9916]
gi|116067514|gb|EAU73268.1| ribosome releasing factor [Synechococcus sp. RS9916]
Length = 182
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 94/122 (77%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
+D++A M+++++ + FN++RTGR+N ++LD+I VEYYG+ LKS+A + TPDS ++
Sbjct: 4 QDLEASMQKSVEATQRMFNTIRTGRANSSLLDRISVEYYGADTPLKSLATLTTPDSQTIQ 63
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
IQP+D +L SIEKAI S+LG TPNNDG++IR+ +P LT ERRKE K+ +K AEEGKV
Sbjct: 64 IQPFDMGALASIEKAIAMSELGFTPNNDGKLIRINVPPLTEERRKEFCKLASKYAEEGKV 123
Query: 218 VM 219
+
Sbjct: 124 AL 125
>gi|425449975|ref|ZP_18829807.1| Ribosome recycling factor (Ribosome-releasing factor) (RRF)
[Microcystis aeruginosa PCC 7941]
gi|389769386|emb|CCI05755.1| Ribosome recycling factor (Ribosome-releasing factor) (RRF)
[Microcystis aeruginosa PCC 7941]
Length = 182
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 65/121 (53%), Positives = 97/121 (80%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+V+ M++T++ + FN++RTGR+N ++LD+I VEYYG LKS+A I+TPD++++ I
Sbjct: 5 EVQDHMQKTVESTQRAFNTIRTGRANASLLDRIVVEYYGMETPLKSLATISTPDATTIAI 64
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QP+D+SS+ +IEKAI SD+G+TP+NDG+ IRL +P LTS+RRKEL K+ AK +EEGKV
Sbjct: 65 QPFDRSSMGAIEKAISLSDVGLTPSNDGQTIRLNIPPLTSDRRKELVKLAAKLSEEGKVA 124
Query: 219 M 219
+
Sbjct: 125 I 125
>gi|423066834|ref|ZP_17055624.1| ribosome recycling factor [Arthrospira platensis C1]
gi|406711599|gb|EKD06799.1| ribosome recycling factor [Arthrospira platensis C1]
Length = 193
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 93/119 (78%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
DV+ M++ ++ +FN++RTGR+N ++LD+I VEYYGSP LKS+A I+TPD+S++ I
Sbjct: 16 DVENLMKKALESTGRSFNTIRTGRANASLLDRITVEYYGSPTPLKSLASISTPDASTITI 75
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
QP+D++SL +IEKAI SD+G+TPNNDG V+RL +P LT RR+E K+ K AEEG+V
Sbjct: 76 QPFDRNSLNNIEKAISMSDVGLTPNNDGSVVRLNIPPLTEARRQEFVKLAGKYAEEGRV 134
>gi|209526796|ref|ZP_03275317.1| ribosome recycling factor [Arthrospira maxima CS-328]
gi|209492757|gb|EDZ93091.1| ribosome recycling factor [Arthrospira maxima CS-328]
Length = 187
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 93/119 (78%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
DV+ M++ ++ +FN++RTGR+N ++LD+I VEYYGSP LKS+A I+TPD+S++ I
Sbjct: 10 DVENLMKKALESTGRSFNTIRTGRANASLLDRITVEYYGSPTPLKSLASISTPDASTITI 69
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
QP+D++SL +IEKAI SD+G+TPNNDG V+RL +P LT RR+E K+ K AEEG+V
Sbjct: 70 QPFDRNSLNNIEKAISMSDVGLTPNNDGSVVRLNIPPLTEARRQEFVKLAGKYAEEGRV 128
>gi|123965820|ref|YP_001010901.1| ribosome recycling factor [Prochlorococcus marinus str. MIT 9515]
gi|166230816|sp|A2BVI3.1|RRF_PROM5 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|123200186|gb|ABM71794.1| Ribosome recycling factor [Prochlorococcus marinus str. MIT 9515]
Length = 182
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 65/123 (52%), Positives = 96/123 (78%)
Query: 97 EKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSL 156
E+++++ M ++++ + NFN++RTGR+N ++LD+I VEYYG+ +KS+A I T DS ++
Sbjct: 3 EQEIQSSMNKSVEATQRNFNTIRTGRANASLLDRISVEYYGAETPIKSLASIATVDSQTI 62
Query: 157 LIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGK 216
IQP+D S L++IEKAI SDLG+TPNNDG+VIR+ +P LT ERRKE K+ +K AEEGK
Sbjct: 63 SIQPFDISCLQAIEKAISMSDLGITPNNDGKVIRINVPPLTEERRKEFCKLASKYAEEGK 122
Query: 217 VVM 219
V +
Sbjct: 123 VAL 125
>gi|251797408|ref|YP_003012139.1| ribosome recycling factor [Paenibacillus sp. JDR-2]
gi|247545034|gb|ACT02053.1| ribosome recycling factor [Paenibacillus sp. JDR-2]
Length = 184
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 65/125 (52%), Positives = 91/125 (72%)
Query: 95 SIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSS 154
+I+K + RME+ I ++ + ++R GR+ PA+LD+++VEYYG+P + +A IN PDS
Sbjct: 4 AIKKSAEERMEKAIGALKRDLATLRAGRATPALLDRVQVEYYGAPTPVAQLANINVPDSR 63
Query: 155 SLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEE 214
+L IQP+DKSS+ +IEKAI+ SDLG+TP+NDG IR+TLP LT ERR EL K K EE
Sbjct: 64 TLFIQPWDKSSIAAIEKAIMKSDLGLTPSNDGSAIRITLPPLTEERRSELVKTTKKFGEE 123
Query: 215 GKVVM 219
KV +
Sbjct: 124 AKVAI 128
>gi|409992788|ref|ZP_11275959.1| ribosome recycling factor [Arthrospira platensis str. Paraca]
gi|291566938|dbj|BAI89210.1| ribosome recycling factor [Arthrospira platensis NIES-39]
gi|409936367|gb|EKN77860.1| ribosome recycling factor [Arthrospira platensis str. Paraca]
Length = 182
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 93/119 (78%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
DV+ M++ ++ +FN++RTGR+N ++LD+I VEYYGSP LKS+A I+TPD+S++ I
Sbjct: 5 DVENLMKKALESTGRSFNTIRTGRANASLLDRITVEYYGSPTPLKSLASISTPDASTITI 64
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
QP+D++SL +IEKAI SD+G+TPNNDG V+RL +P LT RR+E K+ K AEEG+V
Sbjct: 65 QPFDRNSLNNIEKAISMSDVGLTPNNDGSVVRLNIPPLTEARRQEFVKLAGKYAEEGRV 123
>gi|123968112|ref|YP_001008970.1| ribosome recycling factor [Prochlorococcus marinus str. AS9601]
gi|166230817|sp|A2BQ02.1|RRF_PROMS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|123198222|gb|ABM69863.1| Ribosome recycling factor [Prochlorococcus marinus str. AS9601]
Length = 182
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 65/123 (52%), Positives = 96/123 (78%)
Query: 97 EKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSL 156
EK+++ M ++I+ + NFN++RTGR+N ++LD++ VEYYG+ +KS+A I+T DS ++
Sbjct: 3 EKEIQENMNKSIEATQRNFNTIRTGRANASLLDRVSVEYYGAETPIKSLATISTVDSQTI 62
Query: 157 LIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGK 216
IQP+D S L++IEK+I SDLG+TPNNDG+VIR+ +P LT ERRKE K+ +K AEEGK
Sbjct: 63 SIQPFDISCLQAIEKSISMSDLGITPNNDGKVIRINVPPLTEERRKEFCKLASKYAEEGK 122
Query: 217 VVM 219
V +
Sbjct: 123 VAL 125
>gi|170077573|ref|YP_001734211.1| ribosome recycling factor [Synechococcus sp. PCC 7002]
gi|238689043|sp|B1XJ13.1|RRF_SYNP2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|169885242|gb|ACA98955.1| ribosome recycling factor [Synechococcus sp. PCC 7002]
Length = 182
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 65/121 (53%), Positives = 94/121 (77%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+++ M++TI+ + +FN++RTGR++ ++LD+I VEYYG+ LKS+A I+TPDSS+++I
Sbjct: 5 ELRENMQKTIEATQRSFNTLRTGRASASLLDRITVEYYGAETPLKSLASISTPDSSTIMI 64
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QP+D+ SL +E+AI SDLG+TPNNDG IRL +P LT ERR+EL K K AEEGKV
Sbjct: 65 QPFDRGSLSDVERAISMSDLGLTPNNDGTNIRLNIPPLTKERRQELVKTAGKLAEEGKVA 124
Query: 219 M 219
+
Sbjct: 125 L 125
>gi|254526487|ref|ZP_05138539.1| ribosome recycling factor [Prochlorococcus marinus str. MIT 9202]
gi|221537911|gb|EEE40364.1| ribosome recycling factor [Prochlorococcus marinus str. MIT 9202]
Length = 182
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 65/123 (52%), Positives = 96/123 (78%)
Query: 97 EKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSL 156
EK+++ M ++I+ + NFN++RTGR+N ++LD++ VEYYG+ +KS+A I+T DS ++
Sbjct: 3 EKEIQENMNKSIEATQRNFNTIRTGRANASLLDRVSVEYYGAETPIKSLATISTIDSQTI 62
Query: 157 LIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGK 216
IQP+D S L++IEK+I SDLG+TPNNDG+VIR+ +P LT ERRKE K+ +K AEEGK
Sbjct: 63 SIQPFDISCLQAIEKSISMSDLGITPNNDGKVIRINVPPLTEERRKEFCKLASKYAEEGK 122
Query: 217 VVM 219
V +
Sbjct: 123 VAL 125
>gi|422302477|ref|ZP_16389840.1| Ribosome recycling factor (Ribosome-releasing factor) (RRF)
[Microcystis aeruginosa PCC 9806]
gi|389788349|emb|CCI16131.1| Ribosome recycling factor (Ribosome-releasing factor) (RRF)
[Microcystis aeruginosa PCC 9806]
Length = 182
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 64/121 (52%), Positives = 97/121 (80%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+V+ M++T++ + FN++RTGR+N ++LD+I VEYYG LKS+A I+TPD++++ I
Sbjct: 5 EVQDHMQKTVESTQRGFNTIRTGRANASLLDRIVVEYYGMETPLKSLATISTPDATTIAI 64
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QP+D++S+ +IEKAI SD+G+TP+NDG+ IRL +P LTS+RRKEL K+ AK +EEGKV
Sbjct: 65 QPFDRTSMGAIEKAISLSDVGLTPSNDGQTIRLNIPPLTSDRRKELVKLAAKLSEEGKVA 124
Query: 219 M 219
+
Sbjct: 125 I 125
>gi|150390448|ref|YP_001320497.1| ribosome recycling factor [Alkaliphilus metalliredigens QYMF]
gi|166991551|sp|A6TRM0.1|RRF_ALKMQ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|149950310|gb|ABR48838.1| ribosome recycling factor [Alkaliphilus metalliredigens QYMF]
Length = 185
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 63/125 (50%), Positives = 96/125 (76%)
Query: 95 SIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSS 154
+ K ++ +M +T+ +++ +FNS+R G++NP+MLD+I V+YYGS LK +A ++ P+
Sbjct: 4 EVHKRLEEKMTKTLGVLKDDFNSIRAGKANPSMLDRITVDYYGSITPLKQVASVSAPEPR 63
Query: 155 SLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEE 214
L+IQPYD S + IEKA++ SDLG+ P+NDG++IRL +PQLT ERRKEL+KVV + AEE
Sbjct: 64 LLIIQPYDPSVINGIEKALMMSDLGLNPSNDGKIIRLNIPQLTEERRKELTKVVKRVAEE 123
Query: 215 GKVVM 219
G+V +
Sbjct: 124 GRVAL 128
>gi|78778906|ref|YP_397018.1| ribosome recycling factor [Prochlorococcus marinus str. MIT 9312]
gi|123554500|sp|Q31C13.1|RRF_PROM9 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|78712405|gb|ABB49582.1| ribosome recycling factor [Prochlorococcus marinus str. MIT 9312]
Length = 182
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 65/123 (52%), Positives = 96/123 (78%)
Query: 97 EKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSL 156
E++++ M ++I+ + NFN++RTGR+N ++LD+I VEYYG+ +KS+A I+T DS ++
Sbjct: 3 EQEIQENMNKSIEATQRNFNTIRTGRANASLLDRISVEYYGAETPIKSLATISTVDSQTI 62
Query: 157 LIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGK 216
IQP+D S L++IEK+I SDLG+TPNNDG+VIR+ +P LT ERRKE K+ +K AEEGK
Sbjct: 63 SIQPFDISCLQAIEKSISMSDLGITPNNDGKVIRINVPPLTEERRKEFCKLASKYAEEGK 122
Query: 217 VVM 219
V +
Sbjct: 123 VAL 125
>gi|148241959|ref|YP_001227116.1| ribosome recycling factor [Synechococcus sp. RCC307]
gi|147850269|emb|CAK27763.1| Ribosome recycling factor [Synechococcus sp. RCC307]
Length = 179
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 65/121 (53%), Positives = 93/121 (76%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D++ M ++++ + NFN++RTGR+N ++LDK+ VEYYG+ LKS+A I+ PDS ++ I
Sbjct: 2 DLEDSMSKSLEATQRNFNTIRTGRANTSLLDKVMVEYYGADTPLKSLATISAPDSQTIQI 61
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QP+D S+ IEKAI SDLG+TPNNDG++IR+ +P LT ERRKEL K+ +K AEEGKV
Sbjct: 62 QPFDMGSMALIEKAIGMSDLGLTPNNDGKLIRINIPPLTEERRKELCKIASKYAEEGKVA 121
Query: 219 M 219
+
Sbjct: 122 L 122
>gi|334139070|ref|ZP_08512469.1| ribosome recycling factor [Paenibacillus sp. HGF7]
gi|333603248|gb|EGL14667.1| ribosome recycling factor [Paenibacillus sp. HGF7]
Length = 184
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/125 (53%), Positives = 94/125 (75%)
Query: 95 SIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSS 154
SI+K+ + RM + ID ++ + ++R GR+NPA+LDKI+VEYYG+ + +A I+TPDS
Sbjct: 4 SIKKNAEERMSKAIDALKRDLATLRAGRANPALLDKIQVEYYGAMTPVNQLANISTPDSR 63
Query: 155 SLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEE 214
+L+IQP+DKSS+ +IEKAI+ S+LG+TP NDG VIRL +P LT ERR EL K+ K EE
Sbjct: 64 TLIIQPWDKSSMGAIEKAILKSELGLTPANDGTVIRLVIPPLTEERRSELVKLTRKYGEE 123
Query: 215 GKVVM 219
KV +
Sbjct: 124 AKVAI 128
>gi|390438974|ref|ZP_10227399.1| Ribosome recycling factor (Ribosome-releasing factor) (RRF)
[Microcystis sp. T1-4]
gi|389837604|emb|CCI31523.1| Ribosome recycling factor (Ribosome-releasing factor) (RRF)
[Microcystis sp. T1-4]
Length = 182
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 64/121 (52%), Positives = 97/121 (80%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+V+ M++T++ + FN++RTGR+N ++LD+I VEYYG LKS+A I+TPD++++ I
Sbjct: 5 EVQDHMQKTVESTQRAFNTIRTGRANASLLDRIVVEYYGMETPLKSLATISTPDATTIAI 64
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QP+D++S+ +IEKAI SD+G+TP+NDG+ IRL +P LTS+RRK+L K+ AK AEEGKV
Sbjct: 65 QPFDRTSMGAIEKAISLSDVGLTPSNDGQTIRLNIPPLTSDRRKDLVKLAAKLAEEGKVA 124
Query: 219 M 219
+
Sbjct: 125 V 125
>gi|347542454|ref|YP_004857091.1| ribosome recycling factor [Candidatus Arthromitus sp. SFB-rat-Yit]
gi|346985490|dbj|BAK81165.1| ribosome recycling factor [Candidatus Arthromitus sp. SFB-rat-Yit]
Length = 185
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/120 (55%), Positives = 92/120 (76%)
Query: 100 VKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQ 159
+K +M +TID++ + NSVR GR+NP+MLD+IEVEYYGS + IA I+TP+ +L+IQ
Sbjct: 9 LKEKMLKTIDVLLEDLNSVRVGRANPSMLDRIEVEYYGSMTKINQIANISTPEPRTLMIQ 68
Query: 160 PYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
P++K+ LK IEKAI+ SDLG+ PNNDG +IRLT+P++T E RK +K V K AEE KV +
Sbjct: 69 PWEKNILKDIEKAILKSDLGLMPNNDGTLIRLTIPEMTEETRKNTAKKVKKIAEESKVAL 128
>gi|374997065|ref|YP_004972564.1| ribosome recycling factor [Desulfosporosinus orientis DSM 765]
gi|357215431|gb|AET70049.1| ribosome recycling factor [Desulfosporosinus orientis DSM 765]
Length = 185
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 65/126 (51%), Positives = 94/126 (74%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
S + KD RM + +D +R + ++R GR+NP++LDK+ V+YYG+P + +A I+TP++
Sbjct: 3 SEVIKDADERMHKGVDALRREYATIRAGRANPSVLDKVMVDYYGAPTPVNQLANISTPEA 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
L+IQP+DKS L SIEKAI+ SDLG+ P++DG VIRL +PQLTSERR EL K + K+AE
Sbjct: 63 RMLVIQPWDKSVLPSIEKAIMKSDLGLNPSSDGNVIRLVIPQLTSERRTELVKTIKKKAE 122
Query: 214 EGKVVM 219
E +V +
Sbjct: 123 EARVAV 128
>gi|87123906|ref|ZP_01079756.1| ribosome recycling factor protein Rrf [Synechococcus sp. RS9917]
gi|86168475|gb|EAQ69732.1| ribosome recycling factor protein Rrf [Synechococcus sp. RS9917]
Length = 182
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 64/123 (52%), Positives = 95/123 (77%)
Query: 97 EKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSL 156
+ D++ M+++++ + FN++RTGR+N ++LD+I VEYYG+ LKS+A ++TPDS ++
Sbjct: 3 QNDLETSMQKSVESTQRMFNTIRTGRANSSLLDRISVEYYGADTPLKSLATLSTPDSQTI 62
Query: 157 LIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGK 216
IQP+D S+L +IEKAI S+LG TPNNDG+VIR+ +P LT ERRKE K+ +K AEEGK
Sbjct: 63 QIQPFDLSALAAIEKAIAMSELGFTPNNDGKVIRINVPPLTEERRKEFCKLASKYAEEGK 122
Query: 217 VVM 219
V +
Sbjct: 123 VAL 125
>gi|425444773|ref|ZP_18824816.1| Ribosome recycling factor (Ribosome-releasing factor) (RRF)
[Microcystis aeruginosa PCC 9443]
gi|425454055|ref|ZP_18833802.1| Ribosome recycling factor (Ribosome-releasing factor) (RRF)
[Microcystis aeruginosa PCC 9807]
gi|389735425|emb|CCI01077.1| Ribosome recycling factor (Ribosome-releasing factor) (RRF)
[Microcystis aeruginosa PCC 9443]
gi|389805363|emb|CCI14855.1| Ribosome recycling factor (Ribosome-releasing factor) (RRF)
[Microcystis aeruginosa PCC 9807]
Length = 182
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 64/121 (52%), Positives = 97/121 (80%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+V+ M++T++ + FN++RTGR+N ++LD+I VEYYG LKS+A I+TPD++++ I
Sbjct: 5 EVQDHMQKTVESTQRAFNTIRTGRANASLLDRIVVEYYGMETPLKSLATISTPDATTIAI 64
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QP+D++S+ +IEKAI SD+G+TP+NDG+ IRL +P LTS+RRKEL K+ AK +EEGKV
Sbjct: 65 QPFDRTSMGAIEKAISLSDVGLTPSNDGQTIRLNIPPLTSDRRKELVKLAAKLSEEGKVA 124
Query: 219 M 219
+
Sbjct: 125 I 125
>gi|403383310|ref|ZP_10925367.1| ribosome recycling factor [Kurthia sp. JC30]
Length = 185
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/119 (56%), Positives = 89/119 (74%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K RM + ID + F S+R GR+N ++LD+I VEYYG+P L +A I+ P++ L+IQP
Sbjct: 10 KERMTKAIDALTRAFASIRAGRANASLLDRITVEYYGAPTPLNQMASISVPEARLLVIQP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
YDK+ L IEKAI+ SD+G+TP NDG VIRLT+P LT ERRK+LSK+V K+AEE KV +
Sbjct: 70 YDKTILGEIEKAILKSDIGITPTNDGNVIRLTIPALTEERRKDLSKLVKKEAEEAKVAI 128
>gi|114566420|ref|YP_753574.1| ribosome recycling factor [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|122318505|sp|Q0AYK1.1|RRF_SYNWW RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|114337355|gb|ABI68203.1| ribosome recycling factor [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 185
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/121 (54%), Positives = 92/121 (76%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + RM++TI+ +R + S+R GR+NPAML+KI V+YYG P + +A I P++ L+I
Sbjct: 8 DTEERMKKTIEHLRKDLASLRAGRANPAMLEKIMVDYYGQPTPINQLANITVPEARLLVI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QP+DK+ + SIEKAI+ SDLG+ P+NDG VIRL +PQLT ERRKEL KV+ K+AEE +V
Sbjct: 68 QPWDKTIIASIEKAIMKSDLGINPSNDGNVIRLVIPQLTEERRKELVKVLRKRAEEARVA 127
Query: 219 M 219
+
Sbjct: 128 V 128
>gi|443664299|ref|ZP_21133403.1| ribosome recycling factor [Microcystis aeruginosa DIANCHI905]
gi|443331606|gb|ELS46254.1| ribosome recycling factor [Microcystis aeruginosa DIANCHI905]
Length = 173
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 64/116 (55%), Positives = 94/116 (81%)
Query: 104 MERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDK 163
M++T++ + FN++RTGR+N ++LD+I VEYYG LKS+A I+TPD++++ IQP+D+
Sbjct: 1 MQKTVESTQRAFNTIRTGRANASLLDRIVVEYYGMETPLKSLATISTPDATTIAIQPFDR 60
Query: 164 SSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
+S+ +IEKAI SD+G+TP+NDG+ IRL +P LTS+RRKEL K+ AK AEEGKV +
Sbjct: 61 TSMGAIEKAISLSDVGLTPSNDGQTIRLNIPPLTSDRRKELVKLAAKLAEEGKVAV 116
>gi|357008012|ref|ZP_09073011.1| ribosome recycling factor [Paenibacillus elgii B69]
Length = 184
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 66/125 (52%), Positives = 92/125 (73%)
Query: 95 SIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSS 154
SI+K + RME+ I ++ + S+R GR+ PA+LD+++VEYYGS + +A INTPDS
Sbjct: 4 SIKKSAEERMEKAIAALKKDLASLRAGRATPALLDRVQVEYYGSMTPVNQLANINTPDSR 63
Query: 155 SLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEE 214
+L+IQP+DKSS+ +IEKAI+ SDLG+TP+NDG IR+ +P LT ERR EL K+ K EE
Sbjct: 64 TLMIQPWDKSSVAAIEKAIMKSDLGLTPSNDGSAIRIVIPALTEERRSELVKMTRKYGEE 123
Query: 215 GKVVM 219
KV +
Sbjct: 124 AKVAI 128
>gi|32400999|gb|AAP80705.1| ribosome recycling factor [Griffithsia japonica]
Length = 230
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 119/194 (61%), Gaps = 25/194 (12%)
Query: 27 FLPDSC-HRRAETATCRASSVSVRQWSSAANYSRLVKLSNKPIVVRQLAHKRNGVVRCAT 85
F+P SC H +T SA ++ + VK ++ L V C
Sbjct: 4 FIPSSCWHLNGGDST------------SALDWVKTVKSRRSILICHPLP------VVCEL 45
Query: 86 IEEIEAEKSSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSI 145
E AEKS +ARM++TID V++ FNSVRTGR++P++LD+I+V YYG+ L S+
Sbjct: 46 TENDTAEKS------EARMQKTIDSVKSAFNSVRTGRASPSLLDRIQVNYYGADTPLNSL 99
Query: 146 AQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELS 205
A ++ +S+L+++PYDKS + IE++++ SD+G+TPN+DG IRL++PQLT ERR +L
Sbjct: 100 ATVSVSGTSTLVVEPYDKSCISDIERSLMESDIGLTPNSDGSTIRLSIPQLTKERRSQLV 159
Query: 206 KVVAKQAEEGKVVM 219
K V AE+G+V +
Sbjct: 160 KQVKSMAEDGRVAI 173
>gi|157412937|ref|YP_001483803.1| ribosome recycling factor [Prochlorococcus marinus str. MIT 9215]
gi|166991558|sp|A8G3N6.1|RRF_PROM2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|157387512|gb|ABV50217.1| Ribosome recycling factor [Prochlorococcus marinus str. MIT 9215]
Length = 182
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 64/123 (52%), Positives = 96/123 (78%)
Query: 97 EKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSL 156
EK+++ M ++I+ + NFN++RTGR+N ++LD++ V+YYG+ +KS+A I+T DS ++
Sbjct: 3 EKEIQENMNKSIEATQRNFNTIRTGRANASLLDRVSVDYYGAETPIKSLATISTIDSQTI 62
Query: 157 LIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGK 216
IQP+D S L++IEK+I SDLG+TPNNDG+VIR+ +P LT ERRKE K+ +K AEEGK
Sbjct: 63 SIQPFDISCLQAIEKSISMSDLGITPNNDGKVIRINVPPLTEERRKEFCKLASKYAEEGK 122
Query: 217 VVM 219
V +
Sbjct: 123 VAL 125
>gi|427713965|ref|YP_007062589.1| ribosome recycling factor [Synechococcus sp. PCC 6312]
gi|427378094|gb|AFY62046.1| ribosome recycling factor [Synechococcus sp. PCC 6312]
Length = 182
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 64/121 (52%), Positives = 94/121 (77%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+++ M+++++ + FNS+RTGR++ ++LD+I V+YYG L+S+A I+TPD++++ I
Sbjct: 5 EIEDHMQKSVEATQRMFNSIRTGRASASLLDRITVDYYGIETPLRSLANISTPDATTITI 64
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QPYD+SSL IEKAI SDLG+ PNNDG +RL +P LT++RRKEL K VAK AEEGKV
Sbjct: 65 QPYDRSSLTQIEKAIQMSDLGLNPNNDGTAVRLNIPPLTTDRRKELVKTVAKLAEEGKVA 124
Query: 219 M 219
+
Sbjct: 125 I 125
>gi|167630327|ref|YP_001680826.1| ribosome recycling factor [Heliobacterium modesticaldum Ice1]
gi|238687988|sp|B0THE0.1|RRF_HELMI RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|167593067|gb|ABZ84815.1| ribosome recycling factor [Heliobacterium modesticaldum Ice1]
Length = 185
Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 62/126 (49%), Positives = 96/126 (76%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+ I+K+ + +M++T++ +R + +R GR+NPA+L+K+ VEYYG+P + +A I+ P++
Sbjct: 3 NEIKKETEDKMKKTVEALRKEYQHIRAGRANPALLEKVTVEYYGAPTPVNQLANISAPEA 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
L+IQP+DKS L ++EKAI+ SDLG+TP +DG VIRL +PQLT ERR EL K V K+AE
Sbjct: 63 RLLVIQPWDKSVLPALEKAILKSDLGLTPTSDGAVIRLVIPQLTQERRSELVKTVKKRAE 122
Query: 214 EGKVVM 219
E +V++
Sbjct: 123 EHRVIL 128
>gi|376003453|ref|ZP_09781263.1| ribosome recycling factor [Arthrospira sp. PCC 8005]
gi|375328110|emb|CCE17016.1| ribosome recycling factor [Arthrospira sp. PCC 8005]
Length = 173
Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 63/114 (55%), Positives = 90/114 (78%)
Query: 104 MERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDK 163
M++ ++ +FN++RTGR+N ++LD+I VEYYGSP LKS+A I+TPD+S++ IQP+D+
Sbjct: 1 MKKALESTGRSFNTIRTGRANASLLDRITVEYYGSPTPLKSLASISTPDASTITIQPFDR 60
Query: 164 SSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
+SL +IEKAI SD+G+TPNNDG V+RL +P LT RR+E K+ K AEEG+V
Sbjct: 61 NSLNNIEKAISMSDVGLTPNNDGSVVRLNIPPLTEARRQEFVKLAGKYAEEGRV 114
>gi|428771727|ref|YP_007163517.1| ribosome recycling factor [Cyanobacterium aponinum PCC 10605]
gi|428686006|gb|AFZ55473.1| ribosome recycling factor [Cyanobacterium aponinum PCC 10605]
Length = 183
Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 61/121 (50%), Positives = 96/121 (79%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+++ M ++++ + + N++RTGR+N ++LDKI V+YYG+ LKS+A I+TPD+++L+I
Sbjct: 6 EIQNLMLKSVEKTQQDLNTIRTGRANASLLDKIMVDYYGAETPLKSLANISTPDATTLMI 65
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QP+DK S+ +EKAI SD+G+TPNNDG++IRL +P LT+ERR+E K+ +K AEEGKV
Sbjct: 66 QPFDKGSISLLEKAISMSDIGLTPNNDGQIIRLNIPPLTAERRQEFVKIASKYAEEGKVA 125
Query: 219 M 219
+
Sbjct: 126 I 126
>gi|427734019|ref|YP_007053563.1| ribosome recycling factor [Rivularia sp. PCC 7116]
gi|427369060|gb|AFY53016.1| ribosome recycling factor [Rivularia sp. PCC 7116]
Length = 182
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 65/116 (56%), Positives = 90/116 (77%)
Query: 104 MERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDK 163
M+++I+ + +FN++RTGR+N ++LDKI V YY LKS+A I TPD++++ IQPYD+
Sbjct: 10 MKKSIEATQRSFNTIRTGRANSSLLDKIMVNYYDVDTPLKSLANIGTPDATTITIQPYDQ 69
Query: 164 SSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
SSL +IEKAI SD+G+TPNNDG +IRL +P LT ERRKE K+ AK AEEG+V +
Sbjct: 70 SSLGNIEKAISMSDVGLTPNNDGSIIRLNIPPLTEERRKEFVKLAAKYAEEGRVAI 125
>gi|402574053|ref|YP_006623396.1| ribosome recycling factor [Desulfosporosinus meridiei DSM 13257]
gi|402255250|gb|AFQ45525.1| ribosome recycling factor [Desulfosporosinus meridiei DSM 13257]
Length = 185
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 63/124 (50%), Positives = 92/124 (74%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
S + KD RM + +D +R + ++R GR+NP++LDK+ VEYYG+P + +A I+TP++
Sbjct: 3 SEVIKDANERMHKGVDALRREYTTIRAGRANPSVLDKVMVEYYGAPTPINQLANISTPEA 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
LLIQP+D++ L +IEK I+ SDLG+ P++DG VIRL +PQLT+ERR EL K V K+AE
Sbjct: 63 RMLLIQPWDRTVLPAIEKGIMKSDLGLNPSSDGNVIRLMIPQLTAERRTELVKTVKKKAE 122
Query: 214 EGKV 217
E +V
Sbjct: 123 EARV 126
>gi|374582861|ref|ZP_09655955.1| ribosome recycling factor [Desulfosporosinus youngiae DSM 17734]
gi|374418943|gb|EHQ91378.1| ribosome recycling factor [Desulfosporosinus youngiae DSM 17734]
Length = 185
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 65/124 (52%), Positives = 92/124 (74%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
S + KD RM + +D +R + S+R GR+NP++LDK+ VEYYG+P + +A I+ P++
Sbjct: 3 SEVIKDADERMHKGVDALRREYASIRAGRANPSVLDKVLVEYYGTPTPINQLANISAPEA 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
L+IQP+D+S L +IEKAI+ SDLG+ P++DG VIRL +PQLTSERR EL K V K+AE
Sbjct: 63 RLLMIQPWDRSVLPAIEKAIMKSDLGLNPSSDGSVIRLMIPQLTSERRVELVKAVKKKAE 122
Query: 214 EGKV 217
E +V
Sbjct: 123 EARV 126
>gi|297617174|ref|YP_003702333.1| ribosome recycling factor [Syntrophothermus lipocalidus DSM 12680]
gi|297145011|gb|ADI01768.1| ribosome recycling factor [Syntrophothermus lipocalidus DSM 12680]
Length = 188
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 91/126 (72%)
Query: 92 EKSSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTP 151
E I KDV++RM++T++ + + S+R GR+NPAMLDKI VEYYG P + + I P
Sbjct: 4 EVKEIVKDVESRMKKTVEHLVKDLASLRAGRANPAMLDKITVEYYGQPTPINQLGNIGVP 63
Query: 152 DSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQ 211
+ L+IQP+DK+++ IEKAI+ SDLG+ P NDG VIR+ +P LT ERRKE+ K+V K+
Sbjct: 64 EPRMLVIQPWDKTAIPEIEKAILKSDLGVNPTNDGNVIRIAIPPLTEERRKEMVKMVRKR 123
Query: 212 AEEGKV 217
AEE KV
Sbjct: 124 AEEAKV 129
>gi|354581543|ref|ZP_09000447.1| ribosome recycling factor [Paenibacillus lactis 154]
gi|353201871|gb|EHB67324.1| ribosome recycling factor [Paenibacillus lactis 154]
Length = 184
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/125 (53%), Positives = 91/125 (72%)
Query: 95 SIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSS 154
S++K+ + RME+ I +R + ++R GR+ PA+LD+I VEYYG+P + +A I+TPDS
Sbjct: 4 SVKKNAEERMEKAILALRRDLATLRAGRAAPALLDRITVEYYGAPTPINQLANISTPDSR 63
Query: 155 SLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEE 214
+L+IQP+DKSSL IEKAI+ SDLG+TP NDG IRL +P LT ERR EL K+ K EE
Sbjct: 64 TLMIQPWDKSSLADIEKAIMKSDLGLTPANDGMQIRLVIPALTEERRSELVKMTKKFGEE 123
Query: 215 GKVVM 219
KV +
Sbjct: 124 AKVAI 128
>gi|440753051|ref|ZP_20932254.1| ribosome recycling factor [Microcystis aeruginosa TAIHU98]
gi|440177544|gb|ELP56817.1| ribosome recycling factor [Microcystis aeruginosa TAIHU98]
Length = 173
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 63/114 (55%), Positives = 93/114 (81%)
Query: 104 MERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDK 163
M++T++ + FN++RTGR+N ++LD+I VEYYG LKS+A I+TPD++++ IQP+D+
Sbjct: 1 MQKTVESTQRAFNTIRTGRANASLLDRIVVEYYGMETPLKSLATISTPDATTIAIQPFDR 60
Query: 164 SSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
+S+ +IEKAI SD+G+TP+NDG+ IRL +P LTS+RRK+L K+ AK AEEGKV
Sbjct: 61 TSMGAIEKAISLSDVGLTPSNDGQTIRLNIPPLTSDRRKDLVKLAAKLAEEGKV 114
>gi|342213665|ref|ZP_08706388.1| ribosome recycling factor [Veillonella sp. oral taxon 780 str.
F0422]
gi|341597753|gb|EGS40292.1| ribosome recycling factor [Veillonella sp. oral taxon 780 str.
F0422]
Length = 186
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 62/119 (52%), Positives = 93/119 (78%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
+ARM++TI+ ++ F +VRTGR++ ++LD + V+YYG+P + +A ++ PD +LI P
Sbjct: 11 EARMDKTIESLKHEFANVRTGRAHTSLLDSVMVDYYGAPTPVNQVANVSAPDPRMILIAP 70
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
+DK+ + +IEKAI++SDLG+ PNNDGE IRL +PQLT ERRKEL KVV+K+AE+ KV +
Sbjct: 71 WDKTMIGAIEKAILTSDLGLNPNNDGEAIRLAIPQLTEERRKELVKVVSKKAEDAKVAV 129
>gi|357039336|ref|ZP_09101130.1| Ribosome-recycling factor [Desulfotomaculum gibsoniae DSM 7213]
gi|355358235|gb|EHG06003.1| Ribosome-recycling factor [Desulfotomaculum gibsoniae DSM 7213]
Length = 183
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 63/121 (52%), Positives = 91/121 (75%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + M++T+++V F S+R GR+ PA+LDKI V YYG+P + +A I TP++ L+I
Sbjct: 6 DTEKNMKKTVEVVNKEFASLRAGRATPALLDKIMVTYYGTPTPINQLANITTPEARLLVI 65
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QP+DK+++ IEKAI+ SDLG+TP +DG +IRL +PQLT ERR EL KV+ K+AEEG+V
Sbjct: 66 QPWDKTAMPEIEKAILKSDLGITPASDGNIIRLAVPQLTKERRAELVKVIKKKAEEGRVA 125
Query: 219 M 219
+
Sbjct: 126 V 126
>gi|414155224|ref|ZP_11411539.1| Ribosome-recycling factor [Desulfotomaculum hydrothermale Lam5 =
DSM 18033]
gi|411453274|emb|CCO09443.1| Ribosome-recycling factor [Desulfotomaculum hydrothermale Lam5 =
DSM 18033]
Length = 184
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 63/114 (55%), Positives = 88/114 (77%)
Query: 104 MERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDK 163
M++T+++VR F S+R GR+ PA+LDK+ V YYG+P L +A I+ P++ L+IQP+DK
Sbjct: 13 MKKTVEVVRKEFASLRAGRATPALLDKVTVSYYGTPTPLNQLANISVPEARMLVIQPWDK 72
Query: 164 SSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
S + IE+AI+ SDLG+TP +DG V+RL +PQLT ERR EL KVV K+AEEG+V
Sbjct: 73 SVIPEIERAILKSDLGITPTSDGTVVRLVIPQLTQERRTELVKVVKKKAEEGRV 126
>gi|375308258|ref|ZP_09773544.1| ribosome-recycling factor [Paenibacillus sp. Aloe-11]
gi|375079682|gb|EHS57904.1| ribosome-recycling factor [Paenibacillus sp. Aloe-11]
Length = 184
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 62/125 (49%), Positives = 92/125 (73%)
Query: 95 SIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSS 154
S++K + RM++ I ++ + +S+R GR+ PA+LD+++VEYYG+ + +A +NTPDS
Sbjct: 4 SVKKSAEERMQKAIQALQRDLSSLRAGRATPALLDRVQVEYYGAMTPVNQLANVNTPDSR 63
Query: 155 SLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEE 214
+L+IQP+DKSSL IE+AI SDLG+TP+NDG IRL++P LT ERR EL K+ K EE
Sbjct: 64 TLMIQPWDKSSLADIERAIQKSDLGLTPSNDGNTIRLSIPALTEERRTELVKMTKKNGEE 123
Query: 215 GKVVM 219
K+ +
Sbjct: 124 AKIAI 128
>gi|390454037|ref|ZP_10239565.1| ribosome recycling factor [Paenibacillus peoriae KCTC 3763]
Length = 184
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 62/125 (49%), Positives = 92/125 (73%)
Query: 95 SIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSS 154
S++K + RM++ I ++ + +S+R GR+ PA+LD+++VEYYG+ + +A +NTPDS
Sbjct: 4 SVKKSAEERMQKAIQALQRDLSSLRAGRATPALLDRVQVEYYGAMTPVNQLANVNTPDSR 63
Query: 155 SLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEE 214
+L+IQP+DKSSL IE+AI SDLG+TP+NDG IRL++P LT ERR EL K+ K EE
Sbjct: 64 TLMIQPWDKSSLADIERAIQKSDLGLTPSNDGNTIRLSIPALTEERRAELVKMTKKNGEE 123
Query: 215 GKVVM 219
K+ +
Sbjct: 124 AKIAI 128
>gi|33239972|ref|NP_874914.1| ribosome recycling factor [Prochlorococcus marinus subsp. marinus
str. CCMP1375]
gi|39932093|sp|Q7VD62.1|RRF_PROMA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|33237498|gb|AAP99566.1| Ribosome recycling factor [Prochlorococcus marinus subsp. marinus
str. CCMP1375]
Length = 182
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 63/122 (51%), Positives = 93/122 (76%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
++V+ M+++++ + NFN++RTGR+N ++LD++ VEYYG+ LKS+A I+TPDS +L
Sbjct: 4 QEVELNMQKSVEACQRNFNTIRTGRANTSLLDRLTVEYYGADTPLKSLATISTPDSQTLA 63
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
IQP+D SL IEKAI SDLG TPNNDG++IR+ +P LT ERRK+ K+ +K AEE K+
Sbjct: 64 IQPFDLGSLGLIEKAISISDLGFTPNNDGKIIRINIPPLTEERRKQFCKLASKYAEEAKI 123
Query: 218 VM 219
+
Sbjct: 124 SL 125
>gi|56964004|ref|YP_175735.1| ribosome recycling factor [Bacillus clausii KSM-K16]
gi|60390232|sp|Q5WFT1.1|RRF_BACSK RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|56910247|dbj|BAD64774.1| ribosome recycling factor [Bacillus clausii KSM-K16]
Length = 185
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 63/124 (50%), Positives = 92/124 (74%)
Query: 96 IEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSS 155
I+ D K RM++ ID++ +R GR+NPA+LD++ VEYYG+ L +A + P++
Sbjct: 5 IKADAKTRMDKAIDVLSRELAKLRAGRANPALLDRVTVEYYGAQTPLNQLASVTVPEARL 64
Query: 156 LLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEG 215
LLI PYDK+++ SIEKAI+ SDLG+TP+NDG+VIR+ +P LT ERRK+L ++V+K AEE
Sbjct: 65 LLITPYDKTAVASIEKAILKSDLGLTPSNDGQVIRIAIPPLTEERRKDLVRLVSKTAEES 124
Query: 216 KVVM 219
KV +
Sbjct: 125 KVAV 128
>gi|315648104|ref|ZP_07901205.1| ribosome recycling factor [Paenibacillus vortex V453]
gi|315276750|gb|EFU40093.1| ribosome recycling factor [Paenibacillus vortex V453]
Length = 184
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 66/125 (52%), Positives = 91/125 (72%)
Query: 95 SIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSS 154
S++K+ + RME+ I ++ + ++R GR+ PA+LD+I VEYYG+P L +A I+TPDS
Sbjct: 4 SVKKNAEERMEKAILSLKRDLATLRAGRAAPALLDRITVEYYGAPTPLNQLANISTPDSR 63
Query: 155 SLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEE 214
+L+IQP+DKSSL IEKAI+ SD+G+TP NDG IRL +P LT ERR EL K+ K EE
Sbjct: 64 TLMIQPWDKSSLADIEKAIMKSDIGLTPANDGNQIRLVVPALTEERRTELVKMTKKFGEE 123
Query: 215 GKVVM 219
KV +
Sbjct: 124 AKVAI 128
>gi|334340439|ref|YP_004545419.1| ribosome recycling factor [Desulfotomaculum ruminis DSM 2154]
gi|334091793|gb|AEG60133.1| ribosome recycling factor [Desulfotomaculum ruminis DSM 2154]
Length = 184
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 62/116 (53%), Positives = 91/116 (78%)
Query: 104 MERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDK 163
+++++++VR F S+R GR+ PA++DK+ V YYG+P L +A I+ P++ +LLIQP+DK
Sbjct: 13 LKKSVEVVRKEFASLRAGRATPALVDKVTVSYYGTPTPLNQLANISVPEARTLLIQPWDK 72
Query: 164 SSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
S++ IE+AI+ SDLG+TP +DG VIRLT+PQLT ERR EL K V K+AEEG+V +
Sbjct: 73 SAMPEIERAILKSDLGITPTSDGTVIRLTIPQLTQERRVELVKSVKKKAEEGRVAI 128
>gi|337750015|ref|YP_004644177.1| Frr [Paenibacillus mucilaginosus KNP414]
gi|379722864|ref|YP_005314995.1| Frr [Paenibacillus mucilaginosus 3016]
gi|386725642|ref|YP_006191968.1| ribosome recycling factor [Paenibacillus mucilaginosus K02]
gi|336301204|gb|AEI44307.1| Frr [Paenibacillus mucilaginosus KNP414]
gi|378571536|gb|AFC31846.1| Frr [Paenibacillus mucilaginosus 3016]
gi|384092767|gb|AFH64203.1| ribosome recycling factor [Paenibacillus mucilaginosus K02]
Length = 184
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 64/125 (51%), Positives = 91/125 (72%)
Query: 95 SIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSS 154
SI+K+ + RME+ I ++ S+R GR+ PA+LD+I+VEYYG+ + +A INTPDS
Sbjct: 4 SIKKNAEDRMEKAIGALKKELASLRAGRATPALLDRIQVEYYGAMTPVNQLANINTPDSR 63
Query: 155 SLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEE 214
+L+IQP+DK S+ +IEKAI+ SDLG+TP+NDG IR+ +P LT ERR +L K+ K EE
Sbjct: 64 TLMIQPWDKGSVAAIEKAIMKSDLGLTPSNDGSSIRIVIPALTEERRADLVKMTKKAGEE 123
Query: 215 GKVVM 219
KV +
Sbjct: 124 AKVAI 128
>gi|37519857|ref|NP_923234.1| ribosome recycling factor [Gloeobacter violaceus PCC 7421]
gi|39932053|sp|Q7NNX0.1|RRF_GLOVI RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|35210848|dbj|BAC88229.1| ribosome releasing factor [Gloeobacter violaceus PCC 7421]
Length = 182
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 64/116 (55%), Positives = 89/116 (76%)
Query: 104 MERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDK 163
M + I+ NF ++RTGR++ ++LD+I VEYYG P LK++A I TPD+S++LIQPYD
Sbjct: 10 MRKAIEATAGNFATIRTGRASTSLLDRINVEYYGQPTPLKTLATITTPDASTVLIQPYDP 69
Query: 164 SSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
SSL+ IEK I+ SDLG+ P+NDG+ IRL +P LT+ERRK+L KV+ AEEG+V +
Sbjct: 70 SSLRLIEKTILESDLGLPPSNDGKTIRLNIPPLTAERRKDLVKVLRNLAEEGRVAV 125
>gi|410658726|ref|YP_006911097.1| Ribosome recycling factor [Dehalobacter sp. DCA]
gi|410661715|ref|YP_006914086.1| Ribosome recycling factor [Dehalobacter sp. CF]
gi|409021081|gb|AFV03112.1| Ribosome recycling factor [Dehalobacter sp. DCA]
gi|409024071|gb|AFV06101.1| Ribosome recycling factor [Dehalobacter sp. CF]
Length = 185
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 62/121 (51%), Positives = 91/121 (75%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + +M +T ++++ + SVR GR+NPA+LDK+ V+YYG+P + +A ++ PD + I
Sbjct: 8 DAEEKMHKTEEVLKKDLASVRAGRANPAVLDKVSVDYYGTPTPINQLANVSVPDPRMITI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QP+DKSS+K IEKAI+ SDLG+ P+NDG VIRL +PQLT+ERR E+ K V K+AE+ KV
Sbjct: 68 QPWDKSSIKDIEKAILKSDLGLMPSNDGMVIRLNIPQLTAERRAEIVKTVKKKAEDAKVA 127
Query: 219 M 219
+
Sbjct: 128 V 128
>gi|310641584|ref|YP_003946342.1| ribosome-recycling factor [Paenibacillus polymyxa SC2]
gi|309246534|gb|ADO56101.1| Ribosome-recycling factor [Paenibacillus polymyxa SC2]
Length = 184
Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 62/125 (49%), Positives = 92/125 (73%)
Query: 95 SIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSS 154
S++K + RM++ I ++ + +S+R GR+ PA+LD+++VEYYG+ + +A INTPDS
Sbjct: 4 SVKKSAEERMQKAIQALQRDLSSLRAGRATPALLDRVQVEYYGAMTPVNQLANINTPDSR 63
Query: 155 SLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEE 214
+L+IQP+DKSSL IE+AI SDLG+TP+NDG IRL++P LT ERR +L K+ K EE
Sbjct: 64 TLMIQPWDKSSLADIERAIQKSDLGLTPSNDGNTIRLSIPALTEERRTDLVKLTKKSGEE 123
Query: 215 GKVVM 219
K+ +
Sbjct: 124 AKIAI 128
>gi|126695885|ref|YP_001090771.1| ribosome recycling factor [Prochlorococcus marinus str. MIT 9301]
gi|126542928|gb|ABO17170.1| Ribosome recycling factor [Prochlorococcus marinus str. MIT 9301]
Length = 173
Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 63/116 (54%), Positives = 91/116 (78%)
Query: 104 MERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDK 163
M ++I+ + NFN++RTGR+N ++LD++ VEYYG+ +KS+A I+T DS ++ IQP+D
Sbjct: 1 MNKSIEATQRNFNTIRTGRANASLLDRVSVEYYGAETPIKSLATISTVDSQTISIQPFDI 60
Query: 164 SSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
S L++IEK+I SDLG+TPNNDG+VIR+ +P LT ERRKE K+ +K AEEGKV +
Sbjct: 61 SCLQAIEKSISMSDLGITPNNDGKVIRINVPPLTEERRKEFCKLASKYAEEGKVAL 116
>gi|147677590|ref|YP_001211805.1| ribosome recycling factor [Pelotomaculum thermopropionicum SI]
gi|189044063|sp|A5D2T8.1|RRF_PELTS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|146273687|dbj|BAF59436.1| ribosome recycling factor [Pelotomaculum thermopropionicum SI]
Length = 185
Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 62/122 (50%), Positives = 93/122 (76%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K+ ++ M++TI++V+ F S+R GR+ PA+LDK+ V YYG+P + +A I+ P++ L+
Sbjct: 7 KEAESNMKKTIEVVKKEFASLRAGRATPALLDKVMVNYYGTPTPVNQLANISVPEARLLV 66
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
+QP+DK+ L IE+AI+ SDLG+TP +DG VIRL +PQLT ERR EL KV+ K+AEEG+V
Sbjct: 67 VQPWDKTVLPEIERAILKSDLGITPASDGNVIRLAIPQLTQERRAELMKVIKKKAEEGRV 126
Query: 218 VM 219
+
Sbjct: 127 AI 128
>gi|373485859|ref|ZP_09576541.1| ribosome recycling factor [Holophaga foetida DSM 6591]
gi|372012909|gb|EHP13462.1| ribosome recycling factor [Holophaga foetida DSM 6591]
Length = 191
Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 93/126 (73%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
SI + K RM+ +I+ +R +VRTGR+NP++LD I VEYYGS + L +A ++ P+S
Sbjct: 7 DSILAETKKRMKTSIETLRREMATVRTGRANPSILDSIHVEYYGSEMPLTQLASVSVPES 66
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
S+L+IQP+DKSS+K+IE AI+ S+LG+ P NDG VIRL +P LT ERRKEL+KVV + E
Sbjct: 67 STLVIQPFDKSSIKAIETAILKSELGLNPANDGNVIRLPIPALTEERRKELTKVVHRMGE 126
Query: 214 EGKVVM 219
E K +
Sbjct: 127 EIKTAI 132
>gi|386040611|ref|YP_005959565.1| ribosome-recycling factor RRF; Ribosome-releasing factor
[Paenibacillus polymyxa M1]
gi|343096649|emb|CCC84858.1| ribosome-recycling factor RRF; Ribosome-releasing factor
[Paenibacillus polymyxa M1]
Length = 184
Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 62/125 (49%), Positives = 91/125 (72%)
Query: 95 SIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSS 154
S++K + RM++ I ++ + S+R GR+ PA+LD+++VEYYG+ + +A INTPDS
Sbjct: 4 SVKKSAEERMQKAIQALQRDLASLRAGRATPALLDRVQVEYYGAMTPVNQLANINTPDSR 63
Query: 155 SLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEE 214
+L+IQP+DKSSL IE+AI SDLG+TP+NDG IRL++P LT ERR +L K+ K EE
Sbjct: 64 TLMIQPWDKSSLADIERAIQKSDLGLTPSNDGNTIRLSIPALTEERRTDLVKLTKKSGEE 123
Query: 215 GKVVM 219
K+ +
Sbjct: 124 AKIAI 128
>gi|255071027|ref|XP_002507595.1| ribosomal recyclingfactor [Micromonas sp. RCC299]
gi|226522870|gb|ACO68853.1| ribosomal recyclingfactor [Micromonas sp. RCC299]
Length = 170
Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 62/116 (53%), Positives = 93/116 (80%)
Query: 104 MERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDK 163
ME+TI+ VR FN+VRTGR++P +L++I V+YYG+ L +IA +TPDS +++IQP+D+
Sbjct: 1 MEKTIETVREKFNTVRTGRASPKILNRINVDYYGTLAPLITIANASTPDSQTIVIQPFDR 60
Query: 164 SSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
+ + IE+AI+ SDLG+ P+NDG IRL++P LT+ERR+EL+K+V+K EEGKV +
Sbjct: 61 TIINDIERAIMLSDLGLNPSNDGACIRLSIPPLTAERRQELAKLVSKLGEEGKVAL 116
>gi|291557942|emb|CBL35059.1| ribosome recycling factor [Eubacterium siraeum V10Sc8a]
Length = 184
Score = 139 bits (351), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 63/119 (52%), Positives = 88/119 (73%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K +M + + V T + S+R GR+NPA+LDK+ V+YYG P + ++A + ++ L+I P
Sbjct: 9 KDKMGKCVAAVETEYASIRAGRANPAVLDKVTVDYYGVPTQINAMAAVAVSEARVLVITP 68
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
+D S+LKSIEKAI++SD+G+TP NDG+ IR+T PQLT ERRKEL K V K AEEGKV +
Sbjct: 69 WDASTLKSIEKAILASDIGITPTNDGKAIRITFPQLTEERRKELCKQVKKIAEEGKVAV 127
>gi|167750047|ref|ZP_02422174.1| hypothetical protein EUBSIR_01015 [Eubacterium siraeum DSM 15702]
gi|167657068|gb|EDS01198.1| ribosome recycling factor [Eubacterium siraeum DSM 15702]
gi|291530445|emb|CBK96030.1| ribosome recycling factor [Eubacterium siraeum 70/3]
Length = 184
Score = 139 bits (350), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 63/119 (52%), Positives = 88/119 (73%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K +M + + V T + S+R GR+NPA+LDK+ V+YYG P + ++A + ++ L+I P
Sbjct: 9 KDKMGKCVAAVETEYASIRAGRANPAVLDKVTVDYYGVPTQINAMAAVAVSEARVLVITP 68
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
+D S+LKSIEKAI++SD+G+TP NDG+ IR+T PQLT ERRKEL K V K AEEGKV +
Sbjct: 69 WDASTLKSIEKAILASDIGITPTNDGKAIRITFPQLTEERRKELCKQVKKIAEEGKVAV 127
>gi|306819855|ref|ZP_07453509.1| ribosome recycling factor [Eubacterium yurii subsp. margaretiae
ATCC 43715]
gi|402309157|ref|ZP_10828153.1| ribosome recycling factor [Eubacterium sp. AS15]
gi|304552102|gb|EFM40039.1| ribosome recycling factor [Eubacterium yurii subsp. margaretiae
ATCC 43715]
gi|400373276|gb|EJP26210.1| ribosome recycling factor [Eubacterium sp. AS15]
Length = 185
Score = 139 bits (350), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 65/127 (51%), Positives = 92/127 (72%)
Query: 93 KSSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPD 152
K+ I + +ME+TI +++ + N++RTGR+NP MLDK+ V+YYG+ +K IA I++PD
Sbjct: 2 KTQIYQTTNEKMEKTISVLKEDLNTIRTGRANPKMLDKLTVDYYGTVTPVKQIAAISSPD 61
Query: 153 SSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQA 212
+L IQP+DKSSL IEKAI +DLG+ P NDG +IR+++PQLT ERRKEL K K
Sbjct: 62 PRTLQIQPWDKSSLHLIEKAIQVADLGVNPTNDGLIIRISIPQLTEERRKELVKQAQKMG 121
Query: 213 EEGKVVM 219
E+ KV +
Sbjct: 122 EQAKVAI 128
>gi|257061312|ref|YP_003139200.1| ribosome recycling factor [Cyanothece sp. PCC 8802]
gi|256591478|gb|ACV02365.1| ribosome recycling factor [Cyanothece sp. PCC 8802]
Length = 181
Score = 139 bits (350), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 63/121 (52%), Positives = 92/121 (76%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+++ M+++++ + +FN++RTGR+N ++LD++ VEYYG L +A I TPD++++ I
Sbjct: 4 ELEDNMQKSVEATQRSFNTIRTGRANASLLDRVIVEYYGMETPLNQLANITTPDATTINI 63
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
PYDK S+ +IEKAI SDLG+TPNNDG+VIRL +P LT ERRKEL K+ K AEEGKV
Sbjct: 64 LPYDKGSMGAIEKAINLSDLGLTPNNDGKVIRLNIPPLTEERRKELVKLAGKLAEEGKVA 123
Query: 219 M 219
+
Sbjct: 124 I 124
>gi|218247353|ref|YP_002372724.1| ribosome recycling factor [Cyanothece sp. PCC 8801]
gi|218167831|gb|ACK66568.1| ribosome recycling factor [Cyanothece sp. PCC 8801]
Length = 181
Score = 139 bits (350), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 63/121 (52%), Positives = 92/121 (76%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+++ M+++++ + +FN++RTGR+N ++LD++ VEYYG L +A I TPD++++ I
Sbjct: 4 ELEDNMQKSVEATQRSFNTIRTGRANASLLDRVIVEYYGMETPLNQLANITTPDATTINI 63
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
PYDK S+ +IEKAI SDLG+TPNNDG+VIRL +P LT ERRKEL K+ K AEEGKV
Sbjct: 64 LPYDKGSMGAIEKAINLSDLGLTPNNDGKVIRLNIPPLTEERRKELVKLAGKLAEEGKVA 123
Query: 219 M 219
+
Sbjct: 124 I 124
>gi|308068689|ref|YP_003870294.1| ribosome recycling factor (ribosome releasing factor)
[Paenibacillus polymyxa E681]
gi|305857968|gb|ADM69756.1| Ribosome recycling factor (Ribosome releasing factor)
[Paenibacillus polymyxa E681]
Length = 184
Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 61/125 (48%), Positives = 91/125 (72%)
Query: 95 SIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSS 154
S++K + RM++ I ++ + S+R GR+ PA+LD+++VEYYG+ + +A +NTPDS
Sbjct: 4 SVKKSAEERMQKAIQALQRDLASLRAGRATPALLDRVQVEYYGAMTPVNQLANVNTPDSR 63
Query: 155 SLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEE 214
+L+IQP+DKSSL IE+AI SDLG+TP+NDG IRL++P LT ERR +L K+ K EE
Sbjct: 64 TLMIQPWDKSSLADIERAIQKSDLGLTPSNDGNTIRLSIPALTEERRTDLVKLTKKNGEE 123
Query: 215 GKVVM 219
K+ +
Sbjct: 124 AKIAI 128
>gi|164687908|ref|ZP_02211936.1| hypothetical protein CLOBAR_01553 [Clostridium bartlettii DSM
16795]
gi|164602321|gb|EDQ95786.1| ribosome recycling factor [Clostridium bartlettii DSM 16795]
Length = 184
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 63/123 (51%), Positives = 92/123 (74%)
Query: 95 SIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSS 154
+EK ++A+M++TI+ ++ F+++R GR+N MLDKI V+YYG+P + I I+ P+
Sbjct: 3 ELEKKLQAQMDKTIEALKYEFSTIRAGRANAQMLDKIRVDYYGTPTPINQIGSISVPEPR 62
Query: 155 SLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEE 214
+L+I P+DKS++K IEKAI++SDLG+ P NDG+VIRL +P LT ERR EL+K K AEE
Sbjct: 63 TLVINPWDKSAMKEIEKAIMNSDLGLNPTNDGDVIRLNVPALTEERRIELTKKAKKAAEE 122
Query: 215 GKV 217
KV
Sbjct: 123 FKV 125
>gi|296132870|ref|YP_003640117.1| ribosome recycling factor [Thermincola potens JR]
gi|296031448|gb|ADG82216.1| ribosome recycling factor [Thermincola potens JR]
Length = 185
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 89/117 (76%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
RM + ++ +R + ++RTGR+ PA+L+KI+V+YYG P + +A+++ P+ L+IQP+D
Sbjct: 12 RMRKAVEALRKDLATLRTGRATPALLEKIQVDYYGVPTPINQMAKVSAPEPRLLVIQPWD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
KS L IEKAI+ SDLG+TPNNDG VIRL +PQLT ERR EL K+ K+AE+G+V +
Sbjct: 72 KSVLGEIEKAIMKSDLGLTPNNDGTVIRLNIPQLTQERRAELVKICKKKAEDGRVAI 128
>gi|295111329|emb|CBL28079.1| ribosome recycling factor [Synergistetes bacterium SGP1]
Length = 185
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 97/122 (79%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K+++ M++ ID ++ + S+RTGR++P ++ I+++YYG+P LK IA I P+S ++
Sbjct: 7 KELQESMDKAIDFLQNEYLSIRTGRAHPGLVSDIKLDYYGTPTPLKQIANITIPESRTIQ 66
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
I P+D++SLK+IEKAI+++++GMTP NDG IRLTLP+LT ERR EL+K++AK+AE+ +V
Sbjct: 67 IAPFDRTSLKAIEKAILAANIGMTPQNDGASIRLTLPELTRERRVELTKLLAKKAEDARV 126
Query: 218 VM 219
V+
Sbjct: 127 VV 128
>gi|159901469|ref|YP_001547716.1| ribosome recycling factor [Herpetosiphon aurantiacus DSM 785]
gi|159894508|gb|ABX07588.1| ribosome recycling factor [Herpetosiphon aurantiacus DSM 785]
Length = 192
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 62/122 (50%), Positives = 94/122 (77%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
+D +++M+++ID +R +VRTGR++PA+++ ++VEYYGS + L +A I TP+S +
Sbjct: 14 RDAESKMKKSIDSLRHTLGAVRTGRASPALVEDLKVEYYGSEMPLNQLANIATPESRMIT 73
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
IQPYD+ ++K+IEKAI +S+LG+ P+NDG VIRL +PQLT ERRKEL K V + E+GKV
Sbjct: 74 IQPYDQGAIKAIEKAIQNSELGINPSNDGRVIRLAIPQLTQERRKELVKQVKAKVEDGKV 133
Query: 218 VM 219
+
Sbjct: 134 AI 135
>gi|134299822|ref|YP_001113318.1| ribosome recycling factor [Desulfotomaculum reducens MI-1]
gi|172044307|sp|A4J5Z0.1|RRF_DESRM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|134052522|gb|ABO50493.1| ribosome recycling factor [Desulfotomaculum reducens MI-1]
Length = 184
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 61/116 (52%), Positives = 90/116 (77%)
Query: 104 MERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDK 163
M++++D+VR F S+R GR+ P++LDK+ V YYG+P L +A I+ P++ L+IQP+DK
Sbjct: 13 MKKSVDVVRREFASLRAGRATPSILDKVTVSYYGTPTPLNQLANISVPEARVLVIQPWDK 72
Query: 164 SSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
S + +EKAI+ SD+G+TP++DG VIRL +PQLT ERR EL KV+ K+AEEG+V +
Sbjct: 73 SVIPEVEKAILKSDVGITPSSDGTVIRLIIPQLTQERRTELVKVIKKKAEEGRVAV 128
>gi|333979940|ref|YP_004517885.1| Ribosome-recycling factor [Desulfotomaculum kuznetsovii DSM 6115]
gi|333823421|gb|AEG16084.1| Ribosome-recycling factor [Desulfotomaculum kuznetsovii DSM 6115]
Length = 194
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 62/121 (51%), Positives = 91/121 (75%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+ ++ M++T+++V+ F S+R GR+ PA+LDK+ V YYG+P + +A I+ P+ L+I
Sbjct: 17 EAESNMKKTVELVKKEFASLRAGRATPALLDKVLVSYYGTPTPINQLATISVPEPRLLVI 76
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QP+DK+ L IE+AI+ SDLG+TP +DG VIRL +PQLT ERR EL KVV K+AEEG+V
Sbjct: 77 QPWDKTILPEIERAILKSDLGITPTSDGTVIRLAIPQLTQERRAELVKVVKKKAEEGRVA 136
Query: 219 M 219
+
Sbjct: 137 I 137
>gi|405983848|ref|ZP_11042153.1| ribosome recycling factor [Slackia piriformis YIT 12062]
gi|404388663|gb|EJZ83745.1| ribosome recycling factor [Slackia piriformis YIT 12062]
Length = 185
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 63/119 (52%), Positives = 88/119 (73%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
+A ME+ ++ ++ F SVRTGR+NP MLDKI+V+YYG P + +A + TPD+ L+I+P
Sbjct: 10 EASMEKALENLKEAFVSVRTGRANPMMLDKIKVDYYGVPTPINQMAAVKTPDAHMLIIEP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
+DKS L+ IE AI++SDLG+TP+NDG +IRL P LT ERRKE+ K AEEG+V +
Sbjct: 70 WDKSCLRGIEAAILASDLGITPSNDGSMIRLPFPALTEERRKEMVKQCKAYAEEGRVAV 128
>gi|126699754|ref|YP_001088651.1| ribosome recycling factor [Clostridium difficile 630]
gi|254975733|ref|ZP_05272205.1| ribosome recycling factor [Clostridium difficile QCD-66c26]
gi|255093120|ref|ZP_05322598.1| ribosome recycling factor [Clostridium difficile CIP 107932]
gi|255101273|ref|ZP_05330250.1| ribosome recycling factor [Clostridium difficile QCD-63q42]
gi|255307149|ref|ZP_05351320.1| ribosome recycling factor [Clostridium difficile ATCC 43255]
gi|255314862|ref|ZP_05356445.1| ribosome recycling factor [Clostridium difficile QCD-76w55]
gi|255517536|ref|ZP_05385212.1| ribosome recycling factor [Clostridium difficile QCD-97b34]
gi|255650647|ref|ZP_05397549.1| ribosome recycling factor [Clostridium difficile QCD-37x79]
gi|260683737|ref|YP_003215022.1| ribosome recycling factor [Clostridium difficile CD196]
gi|260687397|ref|YP_003218531.1| ribosome recycling factor [Clostridium difficile R20291]
gi|306520574|ref|ZP_07406921.1| ribosome recycling factor [Clostridium difficile QCD-32g58]
gi|384361366|ref|YP_006199218.1| ribosome recycling factor [Clostridium difficile BI1]
gi|423083953|ref|ZP_17072481.1| ribosome recycling factor [Clostridium difficile 002-P50-2011]
gi|423087348|ref|ZP_17075736.1| ribosome recycling factor [Clostridium difficile 050-P50-2011]
gi|423088608|ref|ZP_17076987.1| ribosome recycling factor [Clostridium difficile 70-100-2010]
gi|122973796|sp|Q185S5.1|RRF_CLOD6 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|115251191|emb|CAJ69022.1| Ribosome-recycling factor [Clostridium difficile 630]
gi|260209900|emb|CBA63839.1| ribosome recycling factor [Clostridium difficile CD196]
gi|260213414|emb|CBE05060.1| ribosome recycling factor [Clostridium difficile R20291]
gi|357543751|gb|EHJ25766.1| ribosome recycling factor [Clostridium difficile 002-P50-2011]
gi|357544766|gb|EHJ26753.1| ribosome recycling factor [Clostridium difficile 050-P50-2011]
gi|357559494|gb|EHJ40942.1| ribosome recycling factor [Clostridium difficile 70-100-2010]
Length = 185
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/125 (52%), Positives = 89/125 (71%)
Query: 93 KSSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPD 152
K I K ++ +M TID ++ F ++R GR+N MLDKI V+YYG+P + I I+ P+
Sbjct: 2 KLEIHKQLEEKMNGTIDALKFEFGTIRAGRANAQMLDKIRVDYYGTPTPINQIGAISVPE 61
Query: 153 SSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQA 212
L+I P+DKS++ IEKAI +SDLG+ P+NDGEVIRL++P LT ERRKEL+K +K A
Sbjct: 62 PRILMISPWDKSAMHEIEKAIANSDLGLNPSNDGEVIRLSVPALTEERRKELAKKASKAA 121
Query: 213 EEGKV 217
EE KV
Sbjct: 122 EEFKV 126
>gi|254421634|ref|ZP_05035352.1| ribosome recycling factor [Synechococcus sp. PCC 7335]
gi|196189123|gb|EDX84087.1| ribosome recycling factor [Synechococcus sp. PCC 7335]
Length = 185
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 61/119 (51%), Positives = 93/119 (78%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+V++ M++ ++ + FN++RTGR++ ++LD+I V+YYGSP SLKS+A I TPD+S+L+I
Sbjct: 8 EVESAMQKAVESTKRAFNTIRTGRASASLLDRIMVDYYGSPTSLKSLANITTPDASTLMI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
Q +D SS++ I KAI SD+G+ PN DG +IRL +P LT+ERR+E +K+ K AEEG+V
Sbjct: 68 QAFDPSSVQLIAKAISMSDVGLVPNTDGALIRLNIPPLTTERRQEFAKLAGKYAEEGRV 126
>gi|345860696|ref|ZP_08812986.1| ribosome recycling factor [Desulfosporosinus sp. OT]
gi|344326192|gb|EGW37680.1| ribosome recycling factor [Desulfosporosinus sp. OT]
Length = 185
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 63/126 (50%), Positives = 93/126 (73%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
S + KD + RM + +D +R + ++R GR+NP++LDK+ VEYYG+P + +A I+TP+
Sbjct: 3 SEVIKDAEERMHKGVDALRREYATIRAGRANPSVLDKVMVEYYGTPTPINQLANISTPEP 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
L+IQ +DKS L +IEKAI+ SDLG+ P++DG VIRL +PQLT++RR EL K V K+AE
Sbjct: 63 RMLVIQSWDKSVLPAIEKAIMKSDLGLNPSSDGTVIRLIIPQLTAQRRAELVKKVKKEAE 122
Query: 214 EGKVVM 219
E +V +
Sbjct: 123 EARVAV 128
>gi|310659006|ref|YP_003936727.1| ribosome recycling factor [[Clostridium] sticklandii]
gi|308825784|emb|CBH21822.1| ribosome recycling factor [[Clostridium] sticklandii]
Length = 185
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 63/127 (49%), Positives = 94/127 (74%)
Query: 93 KSSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPD 152
K I K ++ +ME+TI +++ ++R GR+NP MLD++ V+YYG+ LK +A +++P+
Sbjct: 2 KLDIHKKLEEKMEKTIAVLKDELLTIRAGRANPNMLDRVMVDYYGTMTPLKQMAGVSSPE 61
Query: 153 SSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQA 212
++LIQP+DKS++ SIEKAI+SSDLG P NDG IR+ +PQLT ERRK+L K+VAK
Sbjct: 62 PRTILIQPWDKSAMGSIEKAILSSDLGFNPTNDGNSIRINIPQLTEERRKDLIKLVAKTG 121
Query: 213 EEGKVVM 219
E+ KV +
Sbjct: 122 EQAKVAI 128
>gi|288575126|ref|ZP_06393483.1| ribosome recycling factor [Dethiosulfovibrio peptidovorans DSM
11002]
gi|288570867|gb|EFC92424.1| ribosome recycling factor [Dethiosulfovibrio peptidovorans DSM
11002]
Length = 186
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 59/121 (48%), Positives = 92/121 (76%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D++ +M + +D ++ F +RTGR++P ++ I+V+YYG+ LK +A I+ P+ SLLI
Sbjct: 8 DLEEKMRKAVDFLKGEFVGIRTGRAHPGLVSDIKVDYYGASTPLKQLATISVPEGRSLLI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
P+DK+ LK +EKAI++SDLG+TP NDG+VIRL LP+LT +RRKEL+K+V K +EE ++
Sbjct: 68 TPFDKTVLKDLEKAILASDLGVTPQNDGQVIRLNLPELTGDRRKELTKMVHKLSEEARIA 127
Query: 219 M 219
+
Sbjct: 128 V 128
>gi|295696146|ref|YP_003589384.1| ribosome recycling factor [Kyrpidia tusciae DSM 2912]
gi|295411748|gb|ADG06240.1| ribosome recycling factor [Kyrpidia tusciae DSM 2912]
Length = 184
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 62/126 (49%), Positives = 90/126 (71%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
S + K + RM +++ ++ F SVR GR+ P +LDK+ VEYYG+ + + +A I P+
Sbjct: 2 SDLMKQAEERMNKSLQALKKEFASVRAGRATPGLLDKVTVEYYGTSMPIHQLASITAPEP 61
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
L+IQP+DK +L IEKAI+ SDLG+TP NDG+VIRL +PQLT ERR+EL+++V K AE
Sbjct: 62 RLLVIQPWDKGALAEIEKAILKSDLGLTPTNDGQVIRLAIPQLTQERRQELARMVRKLAE 121
Query: 214 EGKVVM 219
E +V +
Sbjct: 122 ESRVAI 127
>gi|148272566|ref|YP_001222127.1| ribosome recycling factor [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|190360237|sp|A5CQS7.1|RRF_CLAM3 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|147830496|emb|CAN01431.1| frrA [Clavibacter michiganensis subsp. michiganensis NCPPB 382]
Length = 185
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 62/120 (51%), Positives = 90/120 (75%), Gaps = 1/120 (0%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + RM + ++ V+ +F SVRTGR+NPA+ K+ VEYYGSP L +A +N P++ +L++
Sbjct: 9 DARDRMGKAVEAVKEDFGSVRTGRANPALFQKVMVEYYGSPTPLGQLASMNNPEARTLIV 68
Query: 159 QPYDKSSLKSIEKAIVS-SDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
PYDK++LK IEKA+V+ +L T NDGE++RLTLP+LT +RRKE K+V +AEEG+V
Sbjct: 69 TPYDKTALKEIEKALVNVPNLSATVGNDGEMVRLTLPELTEDRRKEFVKIVRGKAEEGRV 128
>gi|452820631|gb|EME27671.1| ribosome recycling factor (plastid) [Galdieria sulphuraria]
Length = 248
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 63/126 (50%), Positives = 93/126 (73%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
S +K+ + RM+++++ V+ N +++RTGR+NPA+LD++ V YYG+ LKS+A I +
Sbjct: 66 SEAQKEAEERMKKSLETVKNNLSTLRTGRANPALLDRLTVSYYGTETPLKSLASITASSA 125
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
++L I+PYD+S +K IEKAI SDL +TPNNDG+ IRL LP LT ERRK+L K V + E
Sbjct: 126 TTLTIEPYDRSYVKDIEKAIAESDLALTPNNDGKSIRLELPPLTEERRKQLIKSVKQLTE 185
Query: 214 EGKVVM 219
EG+V +
Sbjct: 186 EGRVAV 191
>gi|260583805|ref|ZP_05851553.1| ribosome recycling factor [Granulicatella elegans ATCC 700633]
gi|260158431|gb|EEW93499.1| ribosome recycling factor [Granulicatella elegans ATCC 700633]
Length = 186
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 61/119 (51%), Positives = 87/119 (73%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+ K RM++T D ++ +R GR+N ++LD+++VEYYG P + +A + P++ LLI
Sbjct: 9 NAKERMKKTEDALQRELGGIRAGRANASLLDRLQVEYYGVPTPVNQLASVTVPEARMLLI 68
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
PYDKSSL+ IE+AI+ SD+G+TP NDG V+RL +PQLT ERRKEL+K V K+AE KV
Sbjct: 69 TPYDKSSLQDIERAILMSDIGITPTNDGSVVRLVIPQLTEERRKELAKQVGKEAEGAKV 127
>gi|373495435|ref|ZP_09586020.1| ribosome recycling factor [Eubacterium infirmum F0142]
gi|371964913|gb|EHO82417.1| ribosome recycling factor [Eubacterium infirmum F0142]
Length = 182
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 62/120 (51%), Positives = 94/120 (78%)
Query: 100 VKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQ 159
++ R+E++ ++R++ N+VR GR+N ++LDK+ V+YYG+P LK+I+ I+TPD +LLI
Sbjct: 6 LEERIEKSKQILRSDLNTVRAGRANASLLDKVLVDYYGTPSPLKNISNISTPDPRTLLIA 65
Query: 160 PYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
P+D SSL IEKAI S+LG+TP+NDG+ IRL +PQLT ERRKEL+K++ K E+ K+ +
Sbjct: 66 PFDPSSLPEIEKAINKSELGITPSNDGKCIRLVVPQLTEERRKELTKIIKKMGEDCKIAV 125
>gi|266622994|ref|ZP_06115929.1| ribosome recycling factor [Clostridium hathewayi DSM 13479]
gi|288865250|gb|EFC97548.1| ribosome recycling factor [Clostridium hathewayi DSM 13479]
Length = 184
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 59/117 (50%), Positives = 90/117 (76%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M +T++++ +++ ++R GR+NP +LDKI+V+YYG+P L+ + IN P++ ++IQP++
Sbjct: 11 KMNKTLEVLESDYMTIRAGRANPHVLDKIKVDYYGTPTPLQQVGNINVPEARMIIIQPWE 70
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
KS LK+IEKAI++SDLG+ P NDG VIRL P+LT ERRKEL K V K+ E KV +
Sbjct: 71 KSLLKAIEKAILTSDLGINPTNDGSVIRLVFPELTEERRKELVKDVKKKGEAAKVAV 127
>gi|169333879|ref|ZP_02861072.1| hypothetical protein ANASTE_00265 [Anaerofustis stercorihominis DSM
17244]
gi|169259444|gb|EDS73410.1| ribosome recycling factor [Anaerofustis stercorihominis DSM 17244]
Length = 185
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 60/124 (48%), Positives = 92/124 (74%)
Query: 96 IEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSS 155
++ K +M + ++ +++N N++R GR+NP MLD+I V+YYG+P + +A I+ P+ +
Sbjct: 5 VQNQAKEKMIKAVENLQSNLNALRAGRANPKMLDRIMVDYYGTPTPVNQMASISAPEPRT 64
Query: 156 LLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEG 215
L +QP+D+S+L IEKAI+SSDLG+ P+NDG+VIRL +PQLT ERRKEL K+ K+ E
Sbjct: 65 LTVQPWDQSALGLIEKAIMSSDLGLNPSNDGKVIRLVIPQLTEERRKELVKLAQKEGENA 124
Query: 216 KVVM 219
KV +
Sbjct: 125 KVAV 128
>gi|374323500|ref|YP_005076629.1| ribosome recycling factor [Paenibacillus terrae HPL-003]
gi|357202509|gb|AET60406.1| ribosome recycling factor [Paenibacillus terrae HPL-003]
Length = 184
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 61/125 (48%), Positives = 90/125 (72%)
Query: 95 SIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSS 154
S++K + RM + I ++ + S+R GR+ PA+LD+++VEYYG+ + +A +NTPDS
Sbjct: 4 SVKKSAEERMHKAIQSLQRDLASLRAGRATPALLDRVQVEYYGAMTPVNQLANVNTPDSR 63
Query: 155 SLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEE 214
+L+IQP+DK+SL IE+AI SDLG+TP+NDG IRL++P LT ERR +L K+ K EE
Sbjct: 64 TLMIQPWDKTSLADIERAIQKSDLGLTPSNDGNTIRLSIPALTEERRTDLVKLTKKNGEE 123
Query: 215 GKVVM 219
KV +
Sbjct: 124 AKVAI 128
>gi|335429738|ref|ZP_08556636.1| ribosome recycling factor [Haloplasma contractile SSD-17B]
gi|334889748|gb|EGM28033.1| ribosome recycling factor [Haloplasma contractile SSD-17B]
Length = 185
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 88/117 (75%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M+++I+ +R +VRTGR+NP++LD++ V YYG+P L +A I P++ LLI+PYD
Sbjct: 12 KMDKSIESLRHELATVRTGRANPSLLDRVSVVYYGAPSPLNQVASITVPEARQLLIKPYD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
KS L IE+AI ++LG+ PNNDG +IR+++P LT ERRKEL+KVV K EEGKV +
Sbjct: 72 KSILGDIERAINEANLGLNPNNDGNIIRISIPSLTEERRKELAKVVHKYGEEGKVAI 128
>gi|261407947|ref|YP_003244188.1| ribosome recycling factor [Paenibacillus sp. Y412MC10]
gi|329929321|ref|ZP_08283074.1| ribosome recycling factor [Paenibacillus sp. HGF5]
gi|261284410|gb|ACX66381.1| ribosome recycling factor [Paenibacillus sp. Y412MC10]
gi|328936690|gb|EGG33133.1| ribosome recycling factor [Paenibacillus sp. HGF5]
Length = 184
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/125 (52%), Positives = 90/125 (72%)
Query: 95 SIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSS 154
S++K+ + RME+ I ++ + ++R GR+ PA+LD+I VEYYG+ L +A I+TPDS
Sbjct: 4 SVKKNAEERMEKAILSLKRDLATLRAGRAAPALLDRITVEYYGAQTPLNQLANISTPDSR 63
Query: 155 SLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEE 214
+L+IQP+DKSSL IEKAI+ SD+G+TP NDG IRL +P LT ERR EL K+ K EE
Sbjct: 64 TLMIQPWDKSSLADIEKAIMKSDIGLTPANDGNQIRLVVPALTEERRTELVKMTKKFGEE 123
Query: 215 GKVVM 219
KV +
Sbjct: 124 AKVAI 128
>gi|194477329|ref|YP_002049508.1| ribosome releasing factor [Paulinella chromatophora]
gi|171192336|gb|ACB43298.1| ribosome releasing factor [Paulinella chromatophora]
Length = 180
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 61/121 (50%), Positives = 91/121 (75%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D++ M ++++ + N++RTGR+NP++LDKI V+YYG+ SLKS+A + PDS ++ I
Sbjct: 3 DLETSMNKSVEATQRTLNTIRTGRANPSLLDKITVDYYGAETSLKSMATVFAPDSQTIAI 62
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QP+D S+ IEKAI SDLG+T +NDG++IR+ +P LT +RRK+L K+ AK AEEGKV
Sbjct: 63 QPFDIKSMGLIEKAIAISDLGLTTSNDGKIIRINIPPLTQDRRKDLCKLAAKYAEEGKVA 122
Query: 219 M 219
+
Sbjct: 123 L 123
>gi|403667586|ref|ZP_10932891.1| ribosome recycling factor [Kurthia sp. JC8E]
Length = 185
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 86/117 (73%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
RM + ID + ++R GR+N ++LD+I VEYYG+P L +A I+ P++ L+IQPYD
Sbjct: 12 RMSKAIDALTRALAAIRAGRANASLLDRITVEYYGAPTPLNQMAGISIPEARLLVIQPYD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
K+ L IEKA++ SDLG+TP NDG VIRLT+P LT ERRK+L K+V K+AEE KV +
Sbjct: 72 KTILGDIEKALLKSDLGITPTNDGSVIRLTIPALTEERRKDLVKLVKKEAEEAKVAI 128
>gi|333370999|ref|ZP_08462967.1| ribosome recycling factor [Desmospora sp. 8437]
gi|332976811|gb|EGK13639.1| ribosome recycling factor [Desmospora sp. 8437]
Length = 185
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 62/126 (49%), Positives = 91/126 (72%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+++++D RME+ I ++ S+R GR+ P++LDK+ VE YGS + L +A I+TP+
Sbjct: 3 AAVKEDANQRMEKAIQALKRELASIRAGRATPSLLDKVTVECYGSEMPLNQLANISTPEP 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
L++QP+DKS+L +E+AI+ SDLG+TPNNDG +IR+T+P LT ERR EL KVV K E
Sbjct: 63 RLLVVQPWDKSTLGDVERAILKSDLGLTPNNDGNLIRITIPALTEERRGELVKVVKKTGE 122
Query: 214 EGKVVM 219
E KV +
Sbjct: 123 EAKVAI 128
>gi|363889182|ref|ZP_09316547.1| ribosome recycling factor [Eubacteriaceae bacterium CM5]
gi|363891728|ref|ZP_09318905.1| ribosome recycling factor [Eubacteriaceae bacterium CM2]
gi|363895696|ref|ZP_09322686.1| ribosome recycling factor [Eubacteriaceae bacterium ACC19a]
gi|402837360|ref|ZP_10885885.1| ribosome recycling factor [Eubacteriaceae bacterium OBRC8]
gi|361956663|gb|EHL09976.1| ribosome recycling factor [Eubacteriaceae bacterium ACC19a]
gi|361965002|gb|EHL18000.1| ribosome recycling factor [Eubacteriaceae bacterium CM2]
gi|361966978|gb|EHL19850.1| ribosome recycling factor [Eubacteriaceae bacterium CM5]
gi|402275477|gb|EJU24630.1| ribosome recycling factor [Eubacteriaceae bacterium OBRC8]
Length = 185
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 62/119 (52%), Positives = 87/119 (73%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K +ME+TI +++ + N++RTGR+NP MLDK++V+YYGS +K I+ I++P+ +L IQP
Sbjct: 10 KEKMEKTISVLKEDLNTIRTGRANPKMLDKVQVDYYGSMTPIKQISTISSPEPRTLQIQP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
+DK SL IEKAI +DLG+ P NDG +IR+ +PQLT ERRKEL K K E KV +
Sbjct: 70 WDKGSLHLIEKAIQLADLGLNPTNDGNMIRINIPQLTEERRKELIKQAQKMGEHAKVAV 128
>gi|354559637|ref|ZP_08978884.1| Ribosome-recycling factor [Desulfitobacterium metallireducens DSM
15288]
gi|353541274|gb|EHC10743.1| Ribosome-recycling factor [Desulfitobacterium metallireducens DSM
15288]
Length = 185
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 60/126 (47%), Positives = 94/126 (74%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
S + KD + RM + ++ +R + +R GR+NP+ML+++ VEYYG+P + +A I+ P++
Sbjct: 3 SDVLKDAEDRMRKGVESLRKEYTVIRAGRANPSMLERVMVEYYGTPTPVNQLANISVPEA 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
LL+QP+DK++L +IEK I+ SDLG+ P++DG VIRL +PQLT+ERR EL K V K+AE
Sbjct: 63 RMLLLQPWDKTALPAIEKGIMKSDLGLNPSSDGNVIRLIIPQLTAERRTELVKTVKKKAE 122
Query: 214 EGKVVM 219
+ +VV+
Sbjct: 123 DSRVVI 128
>gi|255656125|ref|ZP_05401534.1| ribosome recycling factor [Clostridium difficile QCD-23m63]
gi|296450443|ref|ZP_06892199.1| ribosome recycling factor [Clostridium difficile NAP08]
gi|296879434|ref|ZP_06903428.1| ribosome recycling factor [Clostridium difficile NAP07]
gi|296260704|gb|EFH07543.1| ribosome recycling factor [Clostridium difficile NAP08]
gi|296429580|gb|EFH15433.1| ribosome recycling factor [Clostridium difficile NAP07]
Length = 185
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 64/125 (51%), Positives = 89/125 (71%)
Query: 93 KSSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPD 152
K I K ++ +M TID ++ F ++R GR+N MLDKI V+YYG+P + I I+ P+
Sbjct: 2 KLEIHKQLEEKMNGTIDALKFEFGTIRAGRANAQMLDKIRVDYYGTPTPINQIGAISVPE 61
Query: 153 SSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQA 212
L+I P+DKS++ IEKAI +SDLG+ P+NDGEVIRL++P LT ERRKEL+K +K A
Sbjct: 62 PRILMISPWDKSAMHEIEKAIANSDLGLNPSNDGEVIRLSVPALTEERRKELAKKASKAA 121
Query: 213 EEGKV 217
E+ KV
Sbjct: 122 EDFKV 126
>gi|300866975|ref|ZP_07111646.1| Ribosome-recycling factor [Oscillatoria sp. PCC 6506]
gi|300335010|emb|CBN56812.1| Ribosome-recycling factor [Oscillatoria sp. PCC 6506]
Length = 182
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 60/114 (52%), Positives = 92/114 (80%)
Query: 104 MERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDK 163
M++ ++ + +FN++RTGR+N ++LD++ V+YYGSP +KS+A I+TPD+S++ IQP+D+
Sbjct: 10 MQKAVESTQRSFNTIRTGRANASLLDRVMVDYYGSPTPIKSLASISTPDASTINIQPFDR 69
Query: 164 SSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
++ IEKAI SD+G+TP+NDG VIRL +P LT++RR EL K+ AK +EEGKV
Sbjct: 70 KTINLIEKAISLSDVGLTPSNDGSVIRLNIPPLTTDRRLELVKLAAKFSEEGKV 123
>gi|374583996|ref|ZP_09657088.1| ribosome recycling factor [Leptonema illini DSM 21528]
gi|373872857|gb|EHQ04851.1| ribosome recycling factor [Leptonema illini DSM 21528]
Length = 187
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 63/125 (50%), Positives = 93/125 (74%)
Query: 95 SIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSS 154
SI + K+RM+RT++ ++ FN++R+ R+NPAMLD + EYYG+ L +A I+ P++
Sbjct: 9 SIINEAKSRMDRTLENLKREFNTIRSNRANPAMLDGLHAEYYGADTPLNQLATISVPEAR 68
Query: 155 SLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEE 214
LLI P+DKS+ +IEKAI+ SDLG+TP+NDG VIRL LP++T +RR+EL K V ++ EE
Sbjct: 69 ILLISPFDKSASSAIEKAILKSDLGLTPSNDGSVIRLILPEMTMDRRQELVKQVKQRLEE 128
Query: 215 GKVVM 219
KV +
Sbjct: 129 AKVAI 133
>gi|303228555|ref|ZP_07315383.1| ribosome recycling factor [Veillonella atypica ACS-134-V-Col7a]
gi|303232131|ref|ZP_07318834.1| ribosome recycling factor [Veillonella atypica ACS-049-V-Sch6]
gi|401679884|ref|ZP_10811808.1| ribosome recycling factor [Veillonella sp. ACP1]
gi|429759379|ref|ZP_19291878.1| ribosome recycling factor [Veillonella atypica KON]
gi|302513237|gb|EFL55276.1| ribosome recycling factor [Veillonella atypica ACS-049-V-Sch6]
gi|302516802|gb|EFL58716.1| ribosome recycling factor [Veillonella atypica ACS-134-V-Col7a]
gi|400219011|gb|EJO49882.1| ribosome recycling factor [Veillonella sp. ACP1]
gi|429179655|gb|EKY20894.1| ribosome recycling factor [Veillonella atypica KON]
Length = 186
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 62/117 (52%), Positives = 88/117 (75%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
RM ++I+ ++ F S+RTGR++ A+LDK+ V+YYGSP + +A I+ P+ +LI P+D
Sbjct: 13 RMNKSIESLKHEFASIRTGRASTALLDKVMVDYYGSPTPINQVANISVPEPRMILIAPWD 72
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
KS + +IEKAI+ SDLG+ P NDG IRLT+PQLT ERRKE+ KVV K+AE+ KV +
Sbjct: 73 KSMIGAIEKAILQSDLGLNPGNDGTAIRLTIPQLTEERRKEIVKVVHKKAEDAKVAV 129
>gi|430750280|ref|YP_007213188.1| ribosome recycling factor [Thermobacillus composti KWC4]
gi|430734245|gb|AGA58190.1| ribosome recycling factor [Thermobacillus composti KWC4]
Length = 184
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 63/126 (50%), Positives = 91/126 (72%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+I+K+ + RM++ I +R + ++R GR+ PAMLD+I V+YYG+P + +A INTPD+
Sbjct: 3 QTIKKNAEERMDKAIAALRRDLATLRAGRATPAMLDRILVDYYGAPTPVNQLATINTPDA 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
+L+IQP+DKS L IEKAI+ S+LG+TP NDG +IRL++P LT ERR +L K K E
Sbjct: 63 RTLVIQPWDKSVLGEIEKAIMKSELGLTPANDGSIIRLSVPPLTEERRTDLVKQTKKFGE 122
Query: 214 EGKVVM 219
E KV +
Sbjct: 123 EAKVAI 128
>gi|170781205|ref|YP_001709537.1| ribosome recycling factor [Clavibacter michiganensis subsp.
sepedonicus]
gi|190360238|sp|B0REP7.1|RRF_CLAMS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|169155773|emb|CAQ00894.1| ribosome recycling factor [Clavibacter michiganensis subsp.
sepedonicus]
Length = 185
Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 61/120 (50%), Positives = 89/120 (74%), Gaps = 1/120 (0%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + RM + ++ V+ +F SVRTGR+NPA+ K+ VEYYGSP L +A +N P++ +L++
Sbjct: 9 DARDRMGKAVEAVKEDFGSVRTGRANPALFQKVMVEYYGSPTPLGQLASMNNPEARTLIV 68
Query: 159 QPYDKSSLKSIEKAIVS-SDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
PYDK++LK IEKA+V+ +L T NDGE++R TLP+LT +RRKE K+V +AEEG+V
Sbjct: 69 TPYDKTALKEIEKALVNVPNLSATVGNDGEMVRFTLPELTEDRRKEFVKIVRGKAEEGRV 128
>gi|257784511|ref|YP_003179728.1| ribosome recycling factor [Atopobium parvulum DSM 20469]
gi|257473018|gb|ACV51137.1| ribosome recycling factor [Atopobium parvulum DSM 20469]
Length = 181
Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 63/120 (52%), Positives = 87/120 (72%)
Query: 100 VKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQ 159
K ME+ I+ ++ NF VRTGR+NP LD I+V+YYG P + +A I P++S LL++
Sbjct: 8 AKQSMEKCIEALKNNFGRVRTGRANPHALDHIKVDYYGQPTPISQLAAIKVPEASMLLVE 67
Query: 160 PYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
P+DK++LKSIEKAI SSDLG+TP+NDG IRL P T ERR+EL+K ++ AEE +V +
Sbjct: 68 PWDKTALKSIEKAIESSDLGITPSNDGSAIRLPFPMPTEERRRELAKECSQIAEEARVAI 127
>gi|427414188|ref|ZP_18904378.1| ribosome recycling factor [Veillonella ratti ACS-216-V-Col6b]
gi|425714564|gb|EKU77567.1| ribosome recycling factor [Veillonella ratti ACS-216-V-Col6b]
Length = 186
Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 59/119 (49%), Positives = 91/119 (76%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
+ RM++TI+ ++ F S+RTGR++ A+LDK+ V+YYG+P + +A + P+ +L++P
Sbjct: 11 EGRMDKTIEALKHEFASIRTGRASTALLDKVMVDYYGTPSPINQVANVTAPEPRLILVKP 70
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
++KS + IEKA++ SDLG+ P+NDG+ IRL +PQLT ERRKEL KVV+K+AEE KV +
Sbjct: 71 WEKSMIGPIEKAVLQSDLGLNPSNDGDTIRLAIPQLTEERRKELVKVVSKKAEEAKVAV 129
>gi|374851803|dbj|BAL54752.1| ribosome recycling factor [uncultured Chloroflexi bacterium]
Length = 185
Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 64/125 (51%), Positives = 91/125 (72%)
Query: 95 SIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSS 154
I KD + RM++ I ++ + +RTGR++PA+++KI VEYYG P L +A I P+
Sbjct: 4 DILKDAEGRMKQAIQVLVDDLAGIRTGRASPALVEKIPVEYYGVPTPLMQLASITVPEPR 63
Query: 155 SLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEE 214
SLLI+P+D S+LK+IEKAI+SS+LG+ PNNDG+ IRL LP LT ERR+EL K+V + EE
Sbjct: 64 SLLIKPFDPSALKAIEKAILSSNLGLPPNNDGKAIRLNLPPLTEERRRELVKLVHARLEE 123
Query: 215 GKVVM 219
+V +
Sbjct: 124 ARVAI 128
>gi|406669327|ref|ZP_11076606.1| ribosome recycling factor [Facklamia ignava CCUG 37419]
gi|405583840|gb|EKB57771.1| ribosome recycling factor [Facklamia ignava CCUG 37419]
Length = 186
Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 62/126 (49%), Positives = 91/126 (72%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
S + K + RM ++I+ + ++R GR+N ++LD+++V+YYG+P L +A I +P++
Sbjct: 4 SELLKTTRERMSKSIESFKRELGTIRAGRANASILDRVQVQYYGAPTPLNQLASIASPEA 63
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
LLI PYDKSSL IEKAI+ SD+G+TP+NDG VIRL +P LT ERR+ELSKVV K+ E
Sbjct: 64 RMLLITPYDKSSLGEIEKAILQSDVGITPSNDGNVIRLIIPALTKERRQELSKVVGKEQE 123
Query: 214 EGKVVM 219
K+ +
Sbjct: 124 NAKIAV 129
>gi|433445999|ref|ZP_20410130.1| ribosome recycling factor [Anoxybacillus flavithermus TNO-09.006]
gi|432000744|gb|ELK21636.1| ribosome recycling factor [Anoxybacillus flavithermus TNO-09.006]
Length = 183
Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 62/121 (51%), Positives = 88/121 (72%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+ K +M++ + ++R GR+NPA+L+KI V+YYG P + +A I P++ L+I
Sbjct: 6 NAKEKMDKAVQAFSRELATIRAGRANPALLEKITVDYYGMPTPIIQLASIQVPEARLLVI 65
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QPYDKS LK IEKAI++SDLG+TP+NDG VIR+++P LT ERR+EL K+V K AEE KV
Sbjct: 66 QPYDKSVLKEIEKAILASDLGLTPSNDGSVIRISIPPLTEERRRELVKLVKKYAEEAKVA 125
Query: 219 M 219
+
Sbjct: 126 V 126
>gi|373454686|ref|ZP_09546550.1| ribosome recycling factor [Dialister succinatiphilus YIT 11850]
gi|371935549|gb|EHO63294.1| ribosome recycling factor [Dialister succinatiphilus YIT 11850]
Length = 185
Score = 135 bits (341), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 61/120 (50%), Positives = 91/120 (75%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K + +M+++I+ +++ F S+RTG++N ++LD+I VEYYGS + +A + P++ L+
Sbjct: 7 KTLSEKMDKSINALKSEFTSIRTGQANASLLDRIFVEYYGSRTPVTQVASVTVPEARMLV 66
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
+QP+DKS LK IEKAI+ SDLG+ P NDG +IR+ +PQLT ERRKEL KVV K++EE KV
Sbjct: 67 VQPWDKSLLKEIEKAILQSDLGLVPMNDGNLIRMAIPQLTEERRKELVKVVNKKSEEAKV 126
>gi|440780936|ref|ZP_20959407.1| ribosome recycling factor [Clostridium pasteurianum DSM 525]
gi|440221524|gb|ELP60729.1| ribosome recycling factor [Clostridium pasteurianum DSM 525]
Length = 185
Score = 135 bits (341), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 60/117 (51%), Positives = 88/117 (75%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M +TI +++ S++ GR+NPAMLD+I+VEYYGS +L +A ++ P++ LLIQPYD
Sbjct: 12 KMNKTISVLKNELASMKAGRANPAMLDRIQVEYYGSSTALNQLANVSAPEARVLLIQPYD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
KS++K IE+AI+ S+LG+ P+NDG VIRL +P+LT E RK + K V K E+GKV +
Sbjct: 72 KSAIKDIERAILMSNLGLNPSNDGSVIRLVIPELTEETRKNIVKSVKKAGEDGKVAI 128
>gi|350270335|ref|YP_004881643.1| ribosome recycling factor [Oscillibacter valericigenes Sjm18-20]
gi|348595177|dbj|BAK99137.1| ribosome recycling factor [Oscillibacter valericigenes Sjm18-20]
Length = 185
Score = 135 bits (341), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 89/117 (76%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M+++I+ V +F +VR GR+N A+LD+I V+YYG+P ++ IA I +PD SL+IQP+D
Sbjct: 12 KMKKSIESVAADFAAVRAGRANAAVLDRITVDYYGTPTPIQQIASIASPDPRSLVIQPWD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
+++KSIE+AI +SDLG+ P NDG+ +RL+ PQLT ERRKEL K + K E GKV +
Sbjct: 72 TTAVKSIERAIQNSDLGINPQNDGKSLRLSFPQLTEERRKELVKQIHKYTESGKVAI 128
>gi|313891920|ref|ZP_07825521.1| ribosome recycling factor [Dialister microaerophilus UPII 345-E]
gi|329120951|ref|ZP_08249582.1| ribosome recycling factor [Dialister micraerophilus DSM 19965]
gi|313119563|gb|EFR42754.1| ribosome recycling factor [Dialister microaerophilus UPII 345-E]
gi|327471113|gb|EGF16567.1| ribosome recycling factor [Dialister micraerophilus DSM 19965]
Length = 185
Score = 135 bits (341), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 58/121 (47%), Positives = 93/121 (76%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+++ RM+++I ++T F+S+RTG+++P++LD+I V+YYG+ + + I+ P++ L++
Sbjct: 8 ELRERMDKSIQALKTEFSSIRTGQASPSLLDRIFVDYYGTQTPISQVGSISVPEARMLVV 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QP+DKS LK IEKAI+ SDLG+ P NDG +IR+ +PQLT ERRK+L K+ K+AEE KV
Sbjct: 68 QPWDKSVLKEIEKAILQSDLGLVPMNDGNLIRMAIPQLTEERRKDLVKIANKKAEEAKVA 127
Query: 219 M 219
+
Sbjct: 128 I 128
>gi|366089281|ref|ZP_09455754.1| ribosome recycling factor [Lactobacillus acidipiscis KCTC 13900]
Length = 187
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 61/122 (50%), Positives = 90/122 (73%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K+ +A+M ++ D ++ ++R GR+N ++L++I VEYYG L +AQI P++ LL
Sbjct: 9 KEAQAKMSKSEDALQRELGNIRAGRANASLLNRINVEYYGVDTPLNQMAQITVPEARVLL 68
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
+ PYDKSSLK +E+AI++SDLG++P NDG IRL +PQLT ERRKEL+K V +AE+GKV
Sbjct: 69 VTPYDKSSLKEVERAILASDLGISPANDGSAIRLVIPQLTEERRKELAKQVKAKAEDGKV 128
Query: 218 VM 219
+
Sbjct: 129 AV 130
>gi|398814384|ref|ZP_10573065.1| ribosome recycling factor [Brevibacillus sp. BC25]
gi|398036653|gb|EJL29862.1| ribosome recycling factor [Brevibacillus sp. BC25]
Length = 185
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 92/125 (73%)
Query: 95 SIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSS 154
S+ KD++ RM + I+ ++ + +S+R GR+NPAMLD++ V+YYG+P + +A I+ P+
Sbjct: 4 SVLKDMEDRMNKAINALKKDMSSLRAGRANPAMLDRVTVDYYGTPTPISQLANISVPEPR 63
Query: 155 SLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEE 214
L IQP+DK++LK I++A+ SDLG++P+NDG +IRL +P LT ERRKEL K+ K EE
Sbjct: 64 MLTIQPWDKTALKEIDRALQQSDLGISPSNDGVIIRLMIPPLTEERRKELVKLAGKGGEE 123
Query: 215 GKVVM 219
KV +
Sbjct: 124 AKVAI 128
>gi|212639532|ref|YP_002316052.1| ribosome recycling factor [Anoxybacillus flavithermus WK1]
gi|212561012|gb|ACJ34067.1| Ribosome recycling factor [Anoxybacillus flavithermus WK1]
Length = 183
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/121 (51%), Positives = 88/121 (72%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+ K +M++ + ++R GR+NPA+L+KI V+YYG P + +A I P++ L+I
Sbjct: 6 NAKEKMDKAVQAFSRELATIRAGRANPALLEKITVDYYGMPTPIIQLAGIQVPEARLLVI 65
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QPYDKS LK IEKAI++SDLG+TP+NDG VIR+++P LT ERR+EL K+V K AEE KV
Sbjct: 66 QPYDKSVLKEIEKAILASDLGLTPSNDGSVIRISIPPLTEERRRELVKLVKKYAEEAKVA 125
Query: 219 M 219
+
Sbjct: 126 V 126
>gi|383765068|ref|YP_005444050.1| ribosome-recycling factor [Caldilinea aerophila DSM 14535 = NBRC
104270]
gi|381385336|dbj|BAM02153.1| ribosome-recycling factor [Caldilinea aerophila DSM 14535 = NBRC
104270]
Length = 185
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 58/121 (47%), Positives = 90/121 (74%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D K RM++ I+ +R + ++RTGR++PA+++ I V+YYG P L+ +A I+ P++ +LI
Sbjct: 8 DAKERMDKAIEALRHDLMTIRTGRASPALVEHIPVDYYGVPTPLQQLATISVPEAQQILI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
+PY + + +IEKAI SDLG+TP NDG+VIRLT+P L ERR+EL+K+V K+ EE +V
Sbjct: 68 RPYTRGDIPAIEKAIAKSDLGLTPTNDGQVIRLTIPPLNEERRRELTKLVNKRGEEARVA 127
Query: 219 M 219
+
Sbjct: 128 I 128
>gi|108804238|ref|YP_644175.1| ribosome recycling factor [Rubrobacter xylanophilus DSM 9941]
gi|123177371|sp|Q1AW65.1|RRF_RUBXD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|108765481|gb|ABG04363.1| ribosome recycling factor [Rubrobacter xylanophilus DSM 9941]
Length = 186
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/119 (52%), Positives = 88/119 (73%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + RM+ ++ VR F ++RTGR+NPA+LD+IEVE YG+ + +KS+A I P+ L I
Sbjct: 9 DAERRMKGALEAVRHQFATIRTGRANPALLDRIEVEAYGTRMPIKSVASIGAPEPRLLTI 68
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
PYD + LK+IE+AI SDLG+ P NDG++IRL +P+LT ERR+EL ++V AEEG+V
Sbjct: 69 TPYDPNLLKTIERAIRDSDLGLNPQNDGKIIRLPIPELTEERRRELIRLVRHMAEEGRV 127
>gi|288553032|ref|YP_003424967.1| ribosome recycling factor [Bacillus pseudofirmus OF4]
gi|288544192|gb|ADC48075.1| ribosome recycling factor [Bacillus pseudofirmus OF4]
Length = 185
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/126 (49%), Positives = 89/126 (70%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+ I +D K RM + I+ + +R GR+NPA+LD++ VEYYG+ L +A I P++
Sbjct: 3 AEIMQDAKERMTKAIESLNRELAKLRAGRANPAILDRVTVEYYGAETPLNQLATITVPEA 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
L+IQP+DK+S+ IE+AI +DLG+TP+NDG VIR+ +P LT ERR+EL K+V K AE
Sbjct: 63 RLLMIQPFDKTSMNDIERAIQKADLGLTPSNDGTVIRIAIPPLTEERRRELVKLVKKSAE 122
Query: 214 EGKVVM 219
EGKV +
Sbjct: 123 EGKVAV 128
>gi|312879901|ref|ZP_07739701.1| ribosome recycling factor [Aminomonas paucivorans DSM 12260]
gi|310783192|gb|EFQ23590.1| ribosome recycling factor [Aminomonas paucivorans DSM 12260]
Length = 185
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/122 (50%), Positives = 94/122 (77%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
KD+K R E++I+ ++T +RTGR++PA++++I+V+Y+G+ LK +A +N P+S ++
Sbjct: 7 KDMKHRTEKSIEHLKTTLQGIRTGRAHPALVEEIKVDYFGTLTPLKQMAMVNIPESRQIV 66
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
I P+DK++LK+IEKAI +S LG+ P DGE IRLTLP+LT ERR ELSK+V K +EE KV
Sbjct: 67 IAPWDKTALKAIEKAIQASSLGVNPRIDGESIRLTLPELTRERRVELSKLVNKYSEEAKV 126
Query: 218 VM 219
+
Sbjct: 127 AI 128
>gi|229817669|ref|ZP_04447951.1| hypothetical protein BIFANG_02940 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
gi|229785458|gb|EEP21572.1| hypothetical protein BIFANG_02940 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
Length = 184
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 60/126 (47%), Positives = 92/126 (73%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+S+ + KA+M +T++ + NF +RTGR+NPA+L+ I V+YYG+P +K++A I P+
Sbjct: 2 ASVVEQAKAQMAKTVENTKENFAGIRTGRANPALLNGIMVDYYGAPTPIKAVASIGVPEP 61
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
+L + P+D S ++EKAI +SDLG++PN DG VIRLT+P+LT ERRKE K+ +AE
Sbjct: 62 RTLSVTPFDASQAGAVEKAIRNSDLGVSPNRDGNVIRLTMPELTEERRKEYVKLAKGKAE 121
Query: 214 EGKVVM 219
+GKV +
Sbjct: 122 DGKVAV 127
>gi|406670870|ref|ZP_11078115.1| ribosome recycling factor [Facklamia hominis CCUG 36813]
gi|405582386|gb|EKB56392.1| ribosome recycling factor [Facklamia hominis CCUG 36813]
Length = 185
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/120 (51%), Positives = 86/120 (71%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K KARM+++I+ + S+R G +N ++LD++ VEYYG+P L +A I P+ L+
Sbjct: 7 KTTKARMDKSIEAFQRELGSIRAGVANASILDRVSVEYYGAPTPLNQLASITIPEPRMLM 66
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
I PYDK SLK IEK I+ SD+G+TPNNDG+VIRLT+P LT ERR++L KVV K+ E K+
Sbjct: 67 ISPYDKGSLKDIEKGILMSDVGITPNNDGDVIRLTIPALTKERREDLVKVVGKEQENAKI 126
>gi|359462053|ref|ZP_09250616.1| ribosome recycling factor [Acaryochloris sp. CCMEE 5410]
Length = 182
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 60/116 (51%), Positives = 89/116 (76%)
Query: 104 MERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDK 163
M+++I+ ++ + N++RTGR+N ++LD+I VEYYG+ L+S+A I+TPD+S++ IQP+D
Sbjct: 10 MQKSIEAMKRSLNTIRTGRANASLLDRITVEYYGTETPLRSLATISTPDASTITIQPFDP 69
Query: 164 SSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
SSL IE++I SD+G+ PNNDG IRL +P LT ERRK+ K+ K AEEGKV +
Sbjct: 70 SSLTDIERSISLSDVGLVPNNDGSAIRLNIPPLTEERRKDFVKMAGKIAEEGKVAI 125
>gi|331269638|ref|YP_004396130.1| ribosome recycling factor [Clostridium botulinum BKT015925]
gi|329126188|gb|AEB76133.1| ribosome recycling factor [Clostridium botulinum BKT015925]
Length = 185
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 89/117 (76%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M++TI +++ +S++ G++NPAMLDKI+VEYYGS + +A +++P+ LLIQP+D
Sbjct: 12 KMDKTISVLKKELSSMKAGKANPAMLDKIKVEYYGSETPINQLANVSSPEPRVLLIQPWD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
K+SLK IE+AI+ SDLG+ P+NDG VIRL +P+LT E RKE+ K V K EE KV +
Sbjct: 72 KNSLKDIERAILQSDLGLNPSNDGSVIRLIVPELTEETRKEIVKKVKKMGEEAKVAI 128
>gi|398344747|ref|ZP_10529450.1| ribosome recycling factor [Leptospira inadai serovar Lyme str. 10]
Length = 184
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 57/120 (47%), Positives = 90/120 (75%)
Query: 100 VKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQ 159
+K++M++T++++R +F +RTGR+NPA+++ I+VEYYG+P + + I+ P+ L++
Sbjct: 10 MKSKMDKTVELLRKDFAGIRTGRANPALIEDIKVEYYGAPTPINQLGNISVPEPRLLVVS 69
Query: 160 PYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
PYDK +K IEK I +S LG+ P NDG VIR+ +P+LT ERRKEL+KVV ++EE KV +
Sbjct: 70 PYDKGIIKDIEKGIQASGLGLQPTNDGSVIRIVIPELTGERRKELAKVVKSKSEEKKVAV 129
>gi|297626637|ref|YP_003688400.1| ribosome recycling factor [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
gi|296922402|emb|CBL56974.1| Ribosome recycling factor (Ribosome-releasing factor) (RRF)
[Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
Length = 185
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 60/126 (47%), Positives = 87/126 (69%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
S I K + +M+ ID + +F+ VRTGR+NPAM +K+E EYYG P ++ +A ++PD
Sbjct: 3 SDIIKSAEKKMQGAIDFAKEDFSGVRTGRANPAMFEKLEAEYYGVPTPIQQLASFSSPDP 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
++LI PYDK +L +IEKA+ SDLG+ P +DG IR LP+LT ERRKE K+V +AE
Sbjct: 63 RTMLITPYDKGALGAIEKAVRDSDLGVNPASDGNAIRAVLPELTEERRKEYIKIVRTKAE 122
Query: 214 EGKVVM 219
+ K+ +
Sbjct: 123 DAKIAI 128
>gi|359689296|ref|ZP_09259297.1| ribosome recycling factor [Leptospira licerasiae serovar Varillal
str. MMD0835]
gi|418749483|ref|ZP_13305771.1| ribosome recycling factor [Leptospira licerasiae str. MMD4847]
gi|418759477|ref|ZP_13315657.1| ribosome recycling factor [Leptospira licerasiae serovar Varillal
str. VAR 010]
gi|384113968|gb|EIE00233.1| ribosome recycling factor [Leptospira licerasiae serovar Varillal
str. VAR 010]
gi|404274368|gb|EJZ41686.1| ribosome recycling factor [Leptospira licerasiae str. MMD4847]
Length = 184
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 57/120 (47%), Positives = 91/120 (75%)
Query: 100 VKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQ 159
+K++M++T+++++ +F VRTGR+NPA+++ + VEYYG+P + + I+ P+ L++
Sbjct: 10 MKSKMDKTVELLKKDFAGVRTGRANPALIEDLRVEYYGTPTPINQLGNISAPEPRLLVVS 69
Query: 160 PYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
PYDK ++K IEKAI +S LG+ P NDG VIR+ +P+LT ERRKEL+KVV ++EE KV +
Sbjct: 70 PYDKGTMKDIEKAIQASGLGLQPTNDGVVIRIIIPELTGERRKELAKVVKSKSEEKKVAV 129
>gi|392426776|ref|YP_006467770.1| ribosome recycling factor [Desulfosporosinus acidiphilus SJ4]
gi|391356739|gb|AFM42438.1| ribosome recycling factor [Desulfosporosinus acidiphilus SJ4]
Length = 185
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 60/126 (47%), Positives = 92/126 (73%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
S + KD + RM + ++ +R + S+R GR+NP +LDK+ VEYYG+P + +A ++ P+
Sbjct: 3 SEVIKDAEERMHKGVEALRKEYASIRAGRANPNVLDKVMVEYYGAPTPVNQLANVSAPEP 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
LLIQP+D++ L +IEKAI+ SDLG+ P++DG VIRL +PQLT+ERR E+ K V K+AE
Sbjct: 63 RMLLIQPWDRTVLPAIEKAILKSDLGLNPSSDGSVIRLLIPQLTAERRTEIVKKVKKEAE 122
Query: 214 EGKVVM 219
+ +V +
Sbjct: 123 DARVAV 128
>gi|158338603|ref|YP_001519780.1| ribosome recycling factor [Acaryochloris marina MBIC11017]
gi|158308844|gb|ABW30461.1| ribosome recycling factor [Acaryochloris marina MBIC11017]
Length = 173
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 60/116 (51%), Positives = 89/116 (76%)
Query: 104 MERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDK 163
M+++I+ ++ + N++RTGR+N ++LD+I VEYYG+ L+S+A I+TPD+S++ IQP+D
Sbjct: 1 MQKSIEAMKRSLNTIRTGRANASLLDRITVEYYGTETPLRSLATISTPDASTITIQPFDP 60
Query: 164 SSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
SSL IE++I SD+G+ PNNDG IRL +P LT ERRK+ K+ K AEEGKV +
Sbjct: 61 SSLTDIERSISLSDVGLVPNNDGSAIRLNIPPLTEERRKDFVKMAGKIAEEGKVAI 116
>gi|381182723|ref|ZP_09891513.1| ribosome recycling factor [Listeriaceae bacterium TTU M1-001]
gi|380317378|gb|EIA20707.1| ribosome recycling factor [Listeriaceae bacterium TTU M1-001]
Length = 185
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 61/119 (51%), Positives = 87/119 (73%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K +ME+ + +R GR+N ++LD+++VEYYG+P L +A I+ P++ LLI P
Sbjct: 10 KEKMEKAEQALVRTLGQIRAGRANASILDRVQVEYYGAPTPLNQMASISIPEARMLLITP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
+DK+ + IEKAI+ SDLG+TPNNDG V+RLT+PQLT ERR+EL+K V K+AEE KV +
Sbjct: 70 FDKNVIGDIEKAILKSDLGLTPNNDGSVLRLTIPQLTEERRRELAKEVKKEAEEAKVAV 128
>gi|429220984|ref|YP_007182628.1| ribosome recycling factor [Deinococcus peraridilitoris DSM 19664]
gi|429131847|gb|AFZ68862.1| ribosome recycling factor [Deinococcus peraridilitoris DSM 19664]
Length = 182
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/125 (48%), Positives = 89/125 (71%)
Query: 95 SIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSS 154
SI D +ARM++ I+ + +N + +RTGR+NP +L KI+VEYYGS + L +A + TPD+
Sbjct: 5 SIFGDARARMQKAIEALESNLSVLRTGRANPGILKKIQVEYYGSTMPLDQVASVTTPDAR 64
Query: 155 SLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEE 214
+LL+ P+D+ +L IE+AI SDLG+ PNN G+ I +TLP LT ERRK+L K AE+
Sbjct: 65 TLLVTPWDRGALGHIERAIRDSDLGLNPNNKGDAIFITLPVLTEERRKDLVKTARTYAED 124
Query: 215 GKVVM 219
GK+ +
Sbjct: 125 GKIAV 129
>gi|258516352|ref|YP_003192574.1| ribosome recycling factor [Desulfotomaculum acetoxidans DSM 771]
gi|257780057|gb|ACV63951.1| ribosome recycling factor [Desulfotomaculum acetoxidans DSM 771]
Length = 185
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/124 (51%), Positives = 97/124 (78%)
Query: 96 IEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSS 155
I +D + M++T+++V+ +F S+R GR+ P +LDKI V+YYG+P + +A ++ P++
Sbjct: 5 ILEDAEDSMKKTVEVVKKDFASLRAGRATPGLLDKINVDYYGTPTPVNQLANVSVPEARL 64
Query: 156 LLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEG 215
L+IQP+DKS + ++EKAI+ SDLG+TPN+DG VIRL +PQLT ERRK+L KVV K+AEEG
Sbjct: 65 LVIQPWDKSVIPALEKAILKSDLGITPNSDGVVIRLAVPQLTEERRKDLVKVVKKKAEEG 124
Query: 216 KVVM 219
+V +
Sbjct: 125 RVAV 128
>gi|284048715|ref|YP_003399054.1| ribosome recycling factor [Acidaminococcus fermentans DSM 20731]
gi|283952936|gb|ADB47739.1| ribosome recycling factor [Acidaminococcus fermentans DSM 20731]
Length = 187
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/135 (45%), Positives = 95/135 (70%), Gaps = 7/135 (5%)
Query: 83 CATIEEIEAEKSSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSL 142
ATIEE++ + + +M++ + +R ++RTGR+ P++LD+++V+YYG+P +
Sbjct: 1 MATIEELQTK-------TQEKMDKALHALRNELTNIRTGRATPSLLDQVKVDYYGAPTPV 53
Query: 143 KSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRK 202
+A ++ P+ ++IQP+D+S LK IEKAI++SDLG+ PNNDG VIRL LP LT ERRK
Sbjct: 54 TQVANVSVPEPRMIVIQPWDRSLLKVIEKAIMTSDLGLNPNNDGTVIRLNLPLLTEERRK 113
Query: 203 ELSKVVAKQAEEGKV 217
EL KVV K+ E +V
Sbjct: 114 ELVKVVNKKGEASRV 128
>gi|259046749|ref|ZP_05737150.1| ribosome recycling factor [Granulicatella adiacens ATCC 49175]
gi|259036645|gb|EEW37900.1| ribosome recycling factor [Granulicatella adiacens ATCC 49175]
Length = 186
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/117 (52%), Positives = 86/117 (73%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K RM+++ D ++ S+R GR+N ++LD++EVEYYG+ + +A I P++ LLI P
Sbjct: 11 KERMKKSEDALQRELGSIRAGRANASLLDRLEVEYYGALTPVNQLASITVPEARMLLITP 70
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
YDKSSL IE+AI+ SD+G+TP +DG VIRL +PQLT ERRKEL+K V K+AE KV
Sbjct: 71 YDKSSLNDIERAILMSDIGITPTSDGSVIRLIIPQLTEERRKELAKQVGKEAENAKV 127
>gi|188586056|ref|YP_001917601.1| ribosome recycling factor [Natranaerobius thermophilus JW/NM-WN-LF]
gi|229564261|sp|B2A383.1|RRF_NATTJ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|179350743|gb|ACB85013.1| ribosome recycling factor [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 184
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/126 (48%), Positives = 93/126 (73%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
SI KD + +M++ + +++ S+R GR+NP++L+ I V+YYG L +A I+ P+
Sbjct: 2 DSIFKDAEQKMKKALSSLKSELASLRAGRANPSILEGINVDYYGMATPLNQLANISAPEP 61
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
L++QPYDKS+++ IEKAI+ SD+G+TPNNDG+VIRL +PQLT ERR EL K+V ++ E
Sbjct: 62 RLLVVQPYDKSAIEDIEKAILKSDVGLTPNNDGQVIRLAVPQLTEERRNELVKIVRQKGE 121
Query: 214 EGKVVM 219
+ KVV+
Sbjct: 122 DTKVVV 127
>gi|451344141|ref|ZP_21913203.1| ribosome recycling factor [Eggerthia catenaformis OT 569 = DSM
20559]
gi|449337141|gb|EMD16307.1| ribosome recycling factor [Eggerthia catenaformis OT 569 = DSM
20559]
Length = 181
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 85/117 (72%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+ME+TI + ++RTGR+NP+MLD++ V+YYGSP L I+ I+ + LL++PYD
Sbjct: 13 KMEKTIKAYKNELVNIRTGRANPSMLDRVMVDYYGSPTPLNQISGISVVEGRQLLVKPYD 72
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
KSS+K IE+A+ +DLG+TP NDG VIR+ +P LT ERRKEL K V K AEE K+ +
Sbjct: 73 KSSMKDIERAVYEADLGLTPQNDGAVIRINIPPLTEERRKELVKQVKKLAEEAKIAI 129
>gi|389815289|ref|ZP_10206635.1| ribosome recycling factor [Planococcus antarcticus DSM 14505]
gi|388466068|gb|EIM08377.1| ribosome recycling factor [Planococcus antarcticus DSM 14505]
Length = 185
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/123 (50%), Positives = 89/123 (72%)
Query: 95 SIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSS 154
S+ D K++M I + +S+R GR+ P++LDK+ ++YYGSP + +A I+ P++
Sbjct: 4 SVMNDTKSKMTNAIQAFSRDLSSIRAGRATPSILDKLTIDYYGSPTPVNQVAGISIPEAR 63
Query: 155 SLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEE 214
++IQPYDKS L IEKAI+ SDLG++P+NDG VIRL +P LT ERRK+L+K V K+AEE
Sbjct: 64 LIMIQPYDKSVLGDIEKAILKSDLGLSPSNDGSVIRLAVPALTEERRKDLAKQVKKEAEE 123
Query: 215 GKV 217
KV
Sbjct: 124 AKV 126
>gi|402297393|ref|ZP_10817163.1| ribosome recycling factor [Bacillus alcalophilus ATCC 27647]
gi|401727315|gb|EJT00506.1| ribosome recycling factor [Bacillus alcalophilus ATCC 27647]
Length = 185
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 60/124 (48%), Positives = 89/124 (71%)
Query: 96 IEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSS 155
I K+ + RM + ID + +R GR+NPA+LD++ VEYYG+ L +A I+ P++
Sbjct: 5 ILKNAEGRMTKAIDALNRELAKLRAGRANPALLDRVTVEYYGAETPLNQLATISVPEARL 64
Query: 156 LLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEG 215
L+IQP+DKSS+ +E+AI+ +DLG+TP+NDG +IR+ +P LT ERRKEL K+V + AEE
Sbjct: 65 LVIQPFDKSSINDVERAIMKADLGLTPSNDGTIIRIQIPALTEERRKELVKLVKRSAEEA 124
Query: 216 KVVM 219
KV +
Sbjct: 125 KVAV 128
>gi|350566743|ref|ZP_08935386.1| ribosome recycling factor [Peptoniphilus indolicus ATCC 29427]
gi|348661733|gb|EGY78411.1| ribosome recycling factor [Peptoniphilus indolicus ATCC 29427]
Length = 202
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/126 (48%), Positives = 90/126 (71%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
S I+KD + +M ++I + + + S+R GR+NP +LDKI ++YYG L IA I+ P+
Sbjct: 20 SDIKKDSEQKMSKSISVYKEDLQSIRAGRANPTLLDKIAIDYYGQTTPLNQIAGISAPEP 79
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
L IQP+D +++ IEKAI+ SDLG+TP+NDG+++RL +PQLT ERRK+L KVV K +E
Sbjct: 80 RLLAIQPWDANTIPEIEKAILKSDLGITPSNDGKIVRLVIPQLTEERRKDLIKVVKKNSE 139
Query: 214 EGKVVM 219
KV +
Sbjct: 140 NAKVAL 145
>gi|336113843|ref|YP_004568610.1| ribosome recycling factor [Bacillus coagulans 2-6]
gi|335367273|gb|AEH53224.1| ribosome recycling factor [Bacillus coagulans 2-6]
Length = 186
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 61/119 (51%), Positives = 86/119 (72%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K +M + I + S+R GR+N A+LDKI ++YYG+ + +A I+ P++ ++IQP
Sbjct: 11 KDKMAKAIQAFQRELGSIRAGRANAALLDKITIDYYGARTPVNQLASISVPEARLMVIQP 70
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
YDK+ L IEKAI+ SDLG+TPNNDG VIRL++P LT ERRKEL K++ K+AEE KV +
Sbjct: 71 YDKTVLGEIEKAILKSDLGLTPNNDGSVIRLSIPPLTEERRKELVKLIKKEAEEAKVAI 129
>gi|15895066|ref|NP_348415.1| ribosome recycling factor [Clostridium acetobutylicum ATCC 824]
gi|337737007|ref|YP_004636454.1| ribosome recycling factor [Clostridium acetobutylicum DSM 1731]
gi|384458515|ref|YP_005670935.1| ribosome recycling factor [Clostridium acetobutylicum EA 2018]
gi|22001946|sp|Q97I63.1|RRF_CLOAB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|15024762|gb|AAK79755.1|AE007688_4 Ribosome recycling factor [Clostridium acetobutylicum ATCC 824]
gi|325509204|gb|ADZ20840.1| ribosome recycling factor [Clostridium acetobutylicum EA 2018]
gi|336292659|gb|AEI33793.1| ribosome recycling factor [Clostridium acetobutylicum DSM 1731]
Length = 185
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/126 (49%), Positives = 92/126 (73%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
S I K+++ +M ++I ++ S++ GR+NPAMLD+IEV+YYG+ L +A I+ P+S
Sbjct: 3 SDIIKELEEKMTKSISALKKELTSMKAGRANPAMLDRIEVDYYGTMTPLNQLANISVPES 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
L+IQP+DKS++KSIEKAI+ SDLG+ P+NDG +RL +P+LT E RK + K V K E
Sbjct: 63 RVLMIQPWDKSAMKSIEKAILISDLGLNPSNDGTTMRLVIPELTEETRKNIVKNVKKAGE 122
Query: 214 EGKVVM 219
+GKV +
Sbjct: 123 DGKVAL 128
>gi|325681407|ref|ZP_08160933.1| ribosome recycling factor [Ruminococcus albus 8]
gi|324106897|gb|EGC01187.1| ribosome recycling factor [Ruminococcus albus 8]
Length = 184
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/126 (47%), Positives = 94/126 (74%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+ I+ K +ME++++++ ++F ++R GR+NPA+LDK++VEYYG+P + +A I+ ++
Sbjct: 2 NEIKNKAKEKMEKSVNVMLSDFAAIRAGRANPAVLDKVKVEYYGAPTPVNQMAAISVAEA 61
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
L+I P+DKS+LKSIEKAI +SD+G+ P NDG+ IRL PQLT +RRKE+ K V K E
Sbjct: 62 RILVITPWDKSTLKSIEKAIQASDIGINPQNDGQTIRLIFPQLTEDRRKEIVKDVKKGGE 121
Query: 214 EGKVVM 219
+ KV +
Sbjct: 122 DCKVAV 127
>gi|403234769|ref|ZP_10913355.1| ribosome recycling factor [Bacillus sp. 10403023]
Length = 185
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/120 (51%), Positives = 85/120 (70%)
Query: 100 VKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQ 159
VK +M + I + +VR GR+NPA+LDK+ V+YYG+P L +A IN P++ L+IQ
Sbjct: 9 VKDKMSKAIQALSRELATVRAGRANPAILDKVTVDYYGAPTPLNQLASINVPEARMLVIQ 68
Query: 160 PYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
PYDKS L +EKAI +DLG+ P NDG +IR+++P LT ERR+EL K+V K AEE KV +
Sbjct: 69 PYDKSVLGDMEKAIQKADLGLNPTNDGSIIRISIPPLTEERRRELVKLVKKYAEESKVAV 128
>gi|376260760|ref|YP_005147480.1| ribosome recycling factor [Clostridium sp. BNL1100]
gi|373944754|gb|AEY65675.1| ribosome recycling factor [Clostridium sp. BNL1100]
Length = 185
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 89/122 (72%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K ++ +M++TI++++ N +R GR+NPA+LDK+ ++YYG+P ++ IA ++ P++ +L
Sbjct: 7 KPIEEKMKKTINVLKDNLAGIRAGRANPAILDKLTIDYYGAPTPIQQIATVSVPEARVIL 66
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
IQP++ LK IEK I SD+G+ PNNDG+VIRL P LT ERRKEL+K K+ EE KV
Sbjct: 67 IQPWEAKLLKDIEKEIQKSDIGINPNNDGKVIRLVFPALTEERRKELTKQAKKEGEESKV 126
Query: 218 VM 219
+
Sbjct: 127 AI 128
>gi|225388995|ref|ZP_03758719.1| hypothetical protein CLOSTASPAR_02740 [Clostridium asparagiforme
DSM 15981]
gi|225044935|gb|EEG55181.1| hypothetical protein CLOSTASPAR_02740 [Clostridium asparagiforme
DSM 15981]
Length = 183
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 89/117 (76%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M +T+D++ F ++R GR+NP +LDKI+V+YYG+P L+ + I+ P++ ++IQP++
Sbjct: 10 KMNKTLDVLEDEFGAIRAGRANPHVLDKIKVDYYGTPTPLQQVGNISVPEARMIVIQPWE 69
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
KS +K IEKAI++S+LG+ PNNDG IRL P+LT +RRKEL+K V K+ ++ KV +
Sbjct: 70 KSLIKPIEKAILTSELGINPNNDGNAIRLIFPELTEDRRKELAKDVKKKGDQAKVAI 126
>gi|402817520|ref|ZP_10867108.1| ribosome-recycling factor Frr [Paenibacillus alvei DSM 29]
gi|402505042|gb|EJW15569.1| ribosome-recycling factor Frr [Paenibacillus alvei DSM 29]
Length = 184
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 61/125 (48%), Positives = 90/125 (72%)
Query: 95 SIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSS 154
+++K+ + RME+ I ++ ++R GR+ PA+LD+++VEYYG+ + +A I+TPD
Sbjct: 4 AVKKNAEERMEKAIAALKRELATLRAGRATPALLDRVQVEYYGAMTPVNQLANISTPDPR 63
Query: 155 SLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEE 214
+L+IQP+DKSSL IE+AI+ SDLG+TP NDG +IRL++P LT ERR EL K K EE
Sbjct: 64 TLMIQPWDKSSLADIERAILKSDLGLTPANDGSLIRLSIPPLTEERRAELVKHTKKFGEE 123
Query: 215 GKVVM 219
KV +
Sbjct: 124 AKVAI 128
>gi|424780653|ref|ZP_18207526.1| Ribosome recycling factor [Catellicoccus marimammalium M35/04/3]
gi|422843055|gb|EKU27502.1| Ribosome recycling factor [Catellicoccus marimammalium M35/04/3]
Length = 185
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 87/117 (74%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
+ +ME++ +R + +R GR+N ++LD+++VEYYG P + +AQI+ P++ ++I P
Sbjct: 10 QEKMEKSEQALRRELSQIRAGRANASLLDRVQVEYYGVPTPVNQMAQISIPEARVIMITP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
+DK++LK IE+ I+ SDLG+ P NDG VIRL +PQLT ERRKEL+K V K AE+GKV
Sbjct: 70 FDKTTLKDIERGILESDLGINPTNDGNVIRLVIPQLTEERRKELAKEVKKIAEQGKV 126
>gi|379011798|ref|YP_005269610.1| ribosome recycling factor Frr [Acetobacterium woodii DSM 1030]
gi|375302587|gb|AFA48721.1| ribosome recycling factor Frr [Acetobacterium woodii DSM 1030]
Length = 186
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/117 (51%), Positives = 87/117 (74%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+ME+ + + + S+R GR+NP +LDK+ V+YYGSP L +A I+TP++ ++IQPYD
Sbjct: 13 KMEKALKNLNESLGSLRAGRANPRILDKVLVDYYGSPTGLNQLANISTPEARMIVIQPYD 72
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
+++ +IEK+I+ SDLG P+NDG++IRL +PQLT ERRKEL K+V K EE KV M
Sbjct: 73 ATAIPAIEKSILKSDLGFNPSNDGKIIRLLIPQLTEERRKELVKLVKKYGEECKVAM 129
>gi|121533727|ref|ZP_01665554.1| ribosome recycling factor [Thermosinus carboxydivorans Nor1]
gi|121307718|gb|EAX48633.1| ribosome recycling factor [Thermosinus carboxydivorans Nor1]
Length = 186
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 59/117 (50%), Positives = 88/117 (75%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M++ ++++R F S+R GR+ P++LDK+ V+YYG P + +A I+ P+ ++IQP++
Sbjct: 13 KMKKALEVLRKEFASLRAGRATPSLLDKVTVDYYGMPSPINQVANISVPEPRLIVIQPWE 72
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
KS L IEKAI+ SDLG+TP NDG VIRL++PQLT +RR EL KVV K+AEE +V +
Sbjct: 73 KSMLAPIEKAILKSDLGLTPTNDGNVIRLSIPQLTQQRRSELVKVVHKKAEEARVAI 129
>gi|408410952|ref|ZP_11182143.1| Ribosome-recycling factor [Lactobacillus sp. 66c]
gi|409349360|ref|ZP_11232844.1| Ribosome-recycling factor [Lactobacillus equicursoris CIP 110162]
gi|407874873|emb|CCK83949.1| Ribosome-recycling factor [Lactobacillus sp. 66c]
gi|407878230|emb|CCK84902.1| Ribosome-recycling factor [Lactobacillus equicursoris CIP 110162]
Length = 185
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 64/124 (51%), Positives = 90/124 (72%), Gaps = 1/124 (0%)
Query: 96 IEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSS 155
IEK K+ M ++ID+ ++N +VR G +N ++LD++ VEYYG P L +A + P+
Sbjct: 6 IEK-AKSNMAKSIDVYQSNLATVRAGVANASLLDRVMVEYYGVPTPLTQMAGVTIPEPRV 64
Query: 156 LLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEG 215
L+I PYDKSSL +IE AI++SDLG+TP NDG VIRL +PQLT ERR+E++K V K AEE
Sbjct: 65 LMITPYDKSSLNNIEHAILASDLGLTPANDGNVIRLVIPQLTGERRQEIAKEVGKLAEEA 124
Query: 216 KVVM 219
K+ +
Sbjct: 125 KIAV 128
>gi|238916787|ref|YP_002930304.1| ribosome recycling factor [Eubacterium eligens ATCC 27750]
gi|238872147|gb|ACR71857.1| ribosome recycling factor [Eubacterium eligens ATCC 27750]
Length = 187
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 92/122 (75%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
KD++ RM++++D ++ + ++R GR+NP +LD++ V+YYG+P ++ +A ++ P++ +
Sbjct: 9 KDIEGRMQKSVDNLKEEYVTIRAGRANPHILDRLRVDYYGTPTPIQQVANVSVPEARMIQ 68
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
IQP++ S +K IEKAI+ SDLG+TPNNDG+ IRL P+LT +RRKEL+K + K+ + KV
Sbjct: 69 IQPWEASLIKDIEKAILVSDLGLTPNNDGKTIRLVFPELTEDRRKELAKDIKKKGDNAKV 128
Query: 218 VM 219
+
Sbjct: 129 AI 130
>gi|184201268|ref|YP_001855475.1| ribosome recycling factor [Kocuria rhizophila DC2201]
gi|238689218|sp|B2GKT3.1|RRF_KOCRD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|183581498|dbj|BAG29969.1| ribosome recycling factor [Kocuria rhizophila DC2201]
Length = 185
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 59/124 (47%), Positives = 86/124 (69%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
S + D RM + +D +T+F++VRTGR+NPA+ + V YYG+P L+ +A TP++
Sbjct: 3 SDVLSDATTRMGKAVDAAKTDFSTVRTGRANPALFSSLLVAYYGTPTPLQQLASFQTPEA 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
+LLI PYD+S+L IEKA+ SD+G P NDG VIR+ +P+LT ERRKE K+V +AE
Sbjct: 63 RTLLITPYDRSALNDIEKALRDSDIGANPANDGNVIRVVMPELTEERRKEYVKIVHGKAE 122
Query: 214 EGKV 217
+ +V
Sbjct: 123 DARV 126
>gi|253681713|ref|ZP_04862510.1| ribosome recycling factor [Clostridium botulinum D str. 1873]
gi|253561425|gb|EES90877.1| ribosome recycling factor [Clostridium botulinum D str. 1873]
Length = 185
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 90/119 (75%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K +M+++I +++ +S++ G++NP+MLDKI+VEYYGS + +A +++P+ LLIQP
Sbjct: 10 KEKMDKSISVLKKELSSMKAGKANPSMLDKIKVEYYGSETPINQLANVSSPEPRVLLIQP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
+DK+SLK IE+AI+ SDLG+ P+NDG VIRL +P+LT E RKE+ K V K EE KV +
Sbjct: 70 WDKNSLKDIERAILQSDLGLNPSNDGSVIRLIVPELTEETRKEIVKKVKKMGEEAKVAI 128
>gi|406982722|gb|EKE04005.1| hypothetical protein ACD_20C00120G0006 [uncultured bacterium]
Length = 186
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 59/117 (50%), Positives = 86/117 (73%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M++TI + F+ +RTGR+NP +LDKI +YYG+P L+ I+ I+ D +L+IQPYD
Sbjct: 13 KMQKTIAETKREFSGIRTGRANPMILDKINADYYGTPTPLRQISNISVQDGQTLVIQPYD 72
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
KS++ +IEKAI+ SDLG+ PNNDG+ +R+T P LT +RRK+L K V K E+ KV +
Sbjct: 73 KSAISAIEKAILKSDLGVNPNNDGQNVRITFPPLTEDRRKDLVKQVKKIGEDNKVAI 129
>gi|50842996|ref|YP_056223.1| ribosome recycling factor [Propionibacterium acnes KPA171202]
gi|289426460|ref|ZP_06428203.1| ribosome recycling factor [Propionibacterium acnes SK187]
gi|289428643|ref|ZP_06430326.1| ribosome recycling factor [Propionibacterium acnes J165]
gi|295131067|ref|YP_003581730.1| ribosome recycling factor [Propionibacterium acnes SK137]
gi|335054668|ref|ZP_08547471.1| ribosome recycling factor [Propionibacterium sp. 434-HC2]
gi|354607714|ref|ZP_09025682.1| ribosome recycling factor [Propionibacterium sp. 5_U_42AFAA]
gi|365963215|ref|YP_004944781.1| ribosome recycling factor [Propionibacterium acnes TypeIA2 P.acn31]
gi|365965458|ref|YP_004947023.1| ribosome recycling factor [Propionibacterium acnes TypeIA2 P.acn17]
gi|365974393|ref|YP_004955952.1| ribosome recycling factor [Propionibacterium acnes TypeIA2 P.acn33]
gi|386024488|ref|YP_005942793.1| ribosome-recycling factor [Propionibacterium acnes 266]
gi|387503897|ref|YP_005945126.1| ribosome recycling factor [Propionibacterium acnes 6609]
gi|407935940|ref|YP_006851582.1| ribosome recycling factor [Propionibacterium acnes C1]
gi|417930300|ref|ZP_12573679.1| ribosome recycling factor [Propionibacterium acnes SK182]
gi|422385528|ref|ZP_16465660.1| ribosome recycling factor [Propionibacterium acnes HL096PA3]
gi|422387825|ref|ZP_16467936.1| ribosome recycling factor [Propionibacterium acnes HL096PA2]
gi|422393747|ref|ZP_16473797.1| ribosome recycling factor [Propionibacterium acnes HL099PA1]
gi|422425516|ref|ZP_16502450.1| ribosome recycling factor [Propionibacterium acnes HL043PA1]
gi|422427475|ref|ZP_16504391.1| ribosome recycling factor [Propionibacterium acnes HL087PA1]
gi|422430569|ref|ZP_16507449.1| ribosome recycling factor [Propionibacterium acnes HL072PA2]
gi|422432558|ref|ZP_16509427.1| ribosome recycling factor [Propionibacterium acnes HL059PA2]
gi|422434277|ref|ZP_16511137.1| ribosome recycling factor [Propionibacterium acnes HL083PA2]
gi|422438724|ref|ZP_16515562.1| ribosome recycling factor [Propionibacterium acnes HL092PA1]
gi|422444232|ref|ZP_16521027.1| ribosome recycling factor [Propionibacterium acnes HL002PA1]
gi|422447068|ref|ZP_16523806.1| ribosome recycling factor [Propionibacterium acnes HL027PA1]
gi|422449600|ref|ZP_16526324.1| ribosome recycling factor [Propionibacterium acnes HL036PA3]
gi|422451312|ref|ZP_16528015.1| ribosome recycling factor [Propionibacterium acnes HL030PA2]
gi|422453467|ref|ZP_16530163.1| ribosome recycling factor [Propionibacterium acnes HL087PA3]
gi|422456143|ref|ZP_16532811.1| ribosome recycling factor [Propionibacterium acnes HL030PA1]
gi|422462607|ref|ZP_16539229.1| ribosome recycling factor [Propionibacterium acnes HL038PA1]
gi|422473553|ref|ZP_16550027.1| ribosome recycling factor [Propionibacterium acnes HL056PA1]
gi|422477255|ref|ZP_16553688.1| ribosome recycling factor [Propionibacterium acnes HL007PA1]
gi|422480030|ref|ZP_16556434.1| ribosome recycling factor [Propionibacterium acnes HL063PA1]
gi|422481307|ref|ZP_16557707.1| ribosome recycling factor [Propionibacterium acnes HL036PA1]
gi|422486072|ref|ZP_16562429.1| ribosome recycling factor [Propionibacterium acnes HL043PA2]
gi|422487379|ref|ZP_16563711.1| ribosome recycling factor [Propionibacterium acnes HL013PA2]
gi|422491346|ref|ZP_16567660.1| ribosome recycling factor [Propionibacterium acnes HL020PA1]
gi|422491994|ref|ZP_16568304.1| ribosome recycling factor [Propionibacterium acnes HL086PA1]
gi|422497029|ref|ZP_16573306.1| ribosome recycling factor [Propionibacterium acnes HL002PA3]
gi|422499463|ref|ZP_16575727.1| ribosome recycling factor [Propionibacterium acnes HL063PA2]
gi|422503228|ref|ZP_16579469.1| ribosome recycling factor [Propionibacterium acnes HL027PA2]
gi|422505496|ref|ZP_16581726.1| ribosome recycling factor [Propionibacterium acnes HL036PA2]
gi|422507000|ref|ZP_16583218.1| ribosome recycling factor [Propionibacterium acnes HL046PA2]
gi|422509928|ref|ZP_16586079.1| ribosome recycling factor [Propionibacterium acnes HL059PA1]
gi|422512913|ref|ZP_16589040.1| ribosome recycling factor [Propionibacterium acnes HL087PA2]
gi|422516776|ref|ZP_16592884.1| ribosome recycling factor [Propionibacterium acnes HL110PA2]
gi|422517277|ref|ZP_16593377.1| ribosome recycling factor [Propionibacterium acnes HL074PA1]
gi|422521254|ref|ZP_16597286.1| ribosome recycling factor [Propionibacterium acnes HL045PA1]
gi|422522727|ref|ZP_16598748.1| ribosome recycling factor [Propionibacterium acnes HL053PA2]
gi|422525673|ref|ZP_16601674.1| ribosome recycling factor [Propionibacterium acnes HL083PA1]
gi|422528887|ref|ZP_16604862.1| ribosome recycling factor [Propionibacterium acnes HL053PA1]
gi|422530499|ref|ZP_16606458.1| ribosome recycling factor [Propionibacterium acnes HL110PA1]
gi|422533676|ref|ZP_16609607.1| ribosome recycling factor [Propionibacterium acnes HL072PA1]
gi|422536681|ref|ZP_16612584.1| ribosome recycling factor [Propionibacterium acnes HL078PA1]
gi|422540241|ref|ZP_16616110.1| ribosome recycling factor [Propionibacterium acnes HL013PA1]
gi|422542237|ref|ZP_16618089.1| ribosome recycling factor [Propionibacterium acnes HL037PA1]
gi|422544523|ref|ZP_16620361.1| ribosome recycling factor [Propionibacterium acnes HL082PA1]
gi|422547132|ref|ZP_16622954.1| ribosome recycling factor [Propionibacterium acnes HL050PA3]
gi|422548605|ref|ZP_16624417.1| ribosome recycling factor [Propionibacterium acnes HL050PA1]
gi|422551203|ref|ZP_16626998.1| ribosome recycling factor [Propionibacterium acnes HL005PA3]
gi|422555562|ref|ZP_16631330.1| ribosome recycling factor [Propionibacterium acnes HL005PA2]
gi|422557137|ref|ZP_16632882.1| ribosome recycling factor [Propionibacterium acnes HL025PA2]
gi|422560377|ref|ZP_16636067.1| ribosome recycling factor [Propionibacterium acnes HL005PA1]
gi|422563928|ref|ZP_16639600.1| ribosome recycling factor [Propionibacterium acnes HL046PA1]
gi|422566842|ref|ZP_16642470.1| ribosome recycling factor [Propionibacterium acnes HL002PA2]
gi|422571181|ref|ZP_16646774.1| ribosome recycling factor [Propionibacterium acnes HL067PA1]
gi|422579425|ref|ZP_16654947.1| ribosome recycling factor [Propionibacterium acnes HL005PA4]
gi|60390690|sp|Q6A7K0.1|RRF_PROAC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|50840598|gb|AAT83265.1| ribosome recycling factor [Propionibacterium acnes KPA171202]
gi|289153188|gb|EFD01906.1| ribosome recycling factor [Propionibacterium acnes SK187]
gi|289158041|gb|EFD06261.1| ribosome recycling factor [Propionibacterium acnes J165]
gi|291377325|gb|ADE01180.1| ribosome recycling factor [Propionibacterium acnes SK137]
gi|313763566|gb|EFS34930.1| ribosome recycling factor [Propionibacterium acnes HL013PA1]
gi|313773505|gb|EFS39471.1| ribosome recycling factor [Propionibacterium acnes HL074PA1]
gi|313793959|gb|EFS41983.1| ribosome recycling factor [Propionibacterium acnes HL110PA1]
gi|313801346|gb|EFS42597.1| ribosome recycling factor [Propionibacterium acnes HL110PA2]
gi|313807974|gb|EFS46455.1| ribosome recycling factor [Propionibacterium acnes HL087PA2]
gi|313811557|gb|EFS49271.1| ribosome recycling factor [Propionibacterium acnes HL083PA1]
gi|313816746|gb|EFS54460.1| ribosome recycling factor [Propionibacterium acnes HL059PA1]
gi|313819543|gb|EFS57257.1| ribosome recycling factor [Propionibacterium acnes HL046PA2]
gi|313822134|gb|EFS59848.1| ribosome recycling factor [Propionibacterium acnes HL036PA1]
gi|313823632|gb|EFS61346.1| ribosome recycling factor [Propionibacterium acnes HL036PA2]
gi|313825956|gb|EFS63670.1| ribosome recycling factor [Propionibacterium acnes HL063PA1]
gi|313829423|gb|EFS67137.1| ribosome recycling factor [Propionibacterium acnes HL063PA2]
gi|313831297|gb|EFS69011.1| ribosome recycling factor [Propionibacterium acnes HL007PA1]
gi|313834908|gb|EFS72622.1| ribosome recycling factor [Propionibacterium acnes HL056PA1]
gi|313839933|gb|EFS77647.1| ribosome recycling factor [Propionibacterium acnes HL086PA1]
gi|314914720|gb|EFS78551.1| ribosome recycling factor [Propionibacterium acnes HL005PA4]
gi|314919318|gb|EFS83149.1| ribosome recycling factor [Propionibacterium acnes HL050PA1]
gi|314920772|gb|EFS84603.1| ribosome recycling factor [Propionibacterium acnes HL050PA3]
gi|314924719|gb|EFS88550.1| ribosome recycling factor [Propionibacterium acnes HL036PA3]
gi|314930451|gb|EFS94282.1| ribosome recycling factor [Propionibacterium acnes HL067PA1]
gi|314954392|gb|EFS98798.1| ribosome recycling factor [Propionibacterium acnes HL027PA1]
gi|314957475|gb|EFT01578.1| ribosome recycling factor [Propionibacterium acnes HL002PA1]
gi|314962110|gb|EFT06211.1| ribosome recycling factor [Propionibacterium acnes HL002PA2]
gi|314963689|gb|EFT07789.1| ribosome recycling factor [Propionibacterium acnes HL082PA1]
gi|314968483|gb|EFT12581.1| ribosome recycling factor [Propionibacterium acnes HL037PA1]
gi|314974173|gb|EFT18269.1| ribosome recycling factor [Propionibacterium acnes HL053PA1]
gi|314976537|gb|EFT20632.1| ribosome recycling factor [Propionibacterium acnes HL045PA1]
gi|314978900|gb|EFT22994.1| ribosome recycling factor [Propionibacterium acnes HL072PA2]
gi|314984356|gb|EFT28448.1| ribosome recycling factor [Propionibacterium acnes HL005PA1]
gi|314986546|gb|EFT30638.1| ribosome recycling factor [Propionibacterium acnes HL005PA2]
gi|314990905|gb|EFT34996.1| ribosome recycling factor [Propionibacterium acnes HL005PA3]
gi|315079539|gb|EFT51532.1| ribosome recycling factor [Propionibacterium acnes HL053PA2]
gi|315081233|gb|EFT53209.1| ribosome recycling factor [Propionibacterium acnes HL078PA1]
gi|315083599|gb|EFT55575.1| ribosome recycling factor [Propionibacterium acnes HL027PA2]
gi|315087116|gb|EFT59092.1| ribosome recycling factor [Propionibacterium acnes HL002PA3]
gi|315089289|gb|EFT61265.1| ribosome recycling factor [Propionibacterium acnes HL072PA1]
gi|315095312|gb|EFT67288.1| ribosome recycling factor [Propionibacterium acnes HL038PA1]
gi|315099193|gb|EFT71169.1| ribosome recycling factor [Propionibacterium acnes HL059PA2]
gi|315100324|gb|EFT72300.1| ribosome recycling factor [Propionibacterium acnes HL046PA1]
gi|315106750|gb|EFT78726.1| ribosome recycling factor [Propionibacterium acnes HL030PA1]
gi|315108992|gb|EFT80968.1| ribosome recycling factor [Propionibacterium acnes HL030PA2]
gi|327328425|gb|EGE70187.1| ribosome recycling factor [Propionibacterium acnes HL096PA2]
gi|327329709|gb|EGE71465.1| ribosome recycling factor [Propionibacterium acnes HL096PA3]
gi|327444212|gb|EGE90866.1| ribosome recycling factor [Propionibacterium acnes HL043PA2]
gi|327444909|gb|EGE91563.1| ribosome recycling factor [Propionibacterium acnes HL043PA1]
gi|327446394|gb|EGE93048.1| ribosome recycling factor [Propionibacterium acnes HL013PA2]
gi|327452018|gb|EGE98672.1| ribosome recycling factor [Propionibacterium acnes HL092PA1]
gi|327454945|gb|EGF01600.1| ribosome recycling factor [Propionibacterium acnes HL087PA3]
gi|327457769|gb|EGF04424.1| ribosome recycling factor [Propionibacterium acnes HL083PA2]
gi|328752149|gb|EGF65765.1| ribosome recycling factor [Propionibacterium acnes HL020PA1]
gi|328755222|gb|EGF68838.1| ribosome recycling factor [Propionibacterium acnes HL087PA1]
gi|328758299|gb|EGF71915.1| ribosome recycling factor [Propionibacterium acnes HL025PA2]
gi|328760030|gb|EGF73611.1| ribosome recycling factor [Propionibacterium acnes HL099PA1]
gi|332675946|gb|AEE72762.1| ribosome-recycling factor [Propionibacterium acnes 266]
gi|333763843|gb|EGL41265.1| ribosome recycling factor [Propionibacterium sp. 434-HC2]
gi|335277942|gb|AEH29847.1| ribosome recycling factor [Propionibacterium acnes 6609]
gi|340772427|gb|EGR94931.1| ribosome recycling factor [Propionibacterium acnes SK182]
gi|353556260|gb|EHC25631.1| ribosome recycling factor [Propionibacterium sp. 5_U_42AFAA]
gi|365739896|gb|AEW84098.1| ribosome recycling factor [Propionibacterium acnes TypeIA2 P.acn31]
gi|365742139|gb|AEW81833.1| ribosome recycling factor [Propionibacterium acnes TypeIA2 P.acn17]
gi|365744392|gb|AEW79589.1| ribosome recycling factor [Propionibacterium acnes TypeIA2 P.acn33]
gi|407904521|gb|AFU41351.1| ribosome recycling factor [Propionibacterium acnes C1]
gi|456738652|gb|EMF63219.1| ribosome recycling factor [Propionibacterium acnes FZ1/2/0]
Length = 184
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/126 (47%), Positives = 86/126 (68%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
S I KD + +M +D R F ++RTGR+NPAM +K+ VEYYG+P L+ +A P++
Sbjct: 2 SDIIKDAEKKMGSAVDHAREEFAAIRTGRANPAMFNKLMVEYYGTPTPLQQLASFQVPEA 61
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
++LI P+DKS + +EKAI SDLG+ P+NDG V+R LP LT ERRKE K+ +AE
Sbjct: 62 RTVLIAPFDKSCVNDVEKAIRDSDLGVNPSNDGNVVRCVLPALTEERRKEYIKMAKTKAE 121
Query: 214 EGKVVM 219
EG++ +
Sbjct: 122 EGRIAV 127
>gi|167770609|ref|ZP_02442662.1| hypothetical protein ANACOL_01955 [Anaerotruncus colihominis DSM
17241]
gi|167667204|gb|EDS11334.1| ribosome recycling factor [Anaerotruncus colihominis DSM 17241]
Length = 184
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 89/117 (76%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+ME+TI ++ ++++R GR+NPA+LDKI V+YYG+P ++++A I+ ++ L+IQP+D
Sbjct: 11 KMEKTIRVLENEYSAIRAGRANPAVLDKITVDYYGTPTQIQAMAAISVSEARILVIQPWD 70
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
KS+L+ IEKAI +SD+G+ P NDG VIR+ P LT ERRKE+ K + KQ E+ KV +
Sbjct: 71 KSTLRPIEKAIQASDIGINPTNDGTVIRIVFPPLTEERRKEICKQIKKQGEDSKVAI 127
>gi|218133702|ref|ZP_03462506.1| hypothetical protein BACPEC_01571 [[Bacteroides] pectinophilus ATCC
43243]
gi|217991077|gb|EEC57083.1| ribosome recycling factor [[Bacteroides] pectinophilus ATCC 43243]
Length = 183
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 88/117 (75%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M+++++ + ++ ++R GR+NP +LDKI V+YY +P L+ +A I+ P++ + IQP+D
Sbjct: 10 KMKKSVEALLEDYKTIRAGRANPHILDKIRVDYYNTPTPLQQVANISVPEARIIQIQPWD 69
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
S +K IEKAI+ SDLG+TPNNDG+VIRL P+LT +RRKELSK V K+ E KV +
Sbjct: 70 ASLIKEIEKAIIVSDLGLTPNNDGKVIRLVFPELTEDRRKELSKDVKKKGENAKVAI 126
>gi|282854667|ref|ZP_06264002.1| ribosome recycling factor [Propionibacterium acnes J139]
gi|386069764|ref|YP_005984660.1| ribosome recycling factor [Propionibacterium acnes ATCC 11828]
gi|422390156|ref|ZP_16470252.1| ribosome recycling factor [Propionibacterium acnes HL103PA1]
gi|422458673|ref|ZP_16535324.1| ribosome recycling factor [Propionibacterium acnes HL050PA2]
gi|422462943|ref|ZP_16539562.1| ribosome recycling factor [Propionibacterium acnes HL060PA1]
gi|422467222|ref|ZP_16543776.1| ribosome recycling factor [Propionibacterium acnes HL110PA4]
gi|422469298|ref|ZP_16545823.1| ribosome recycling factor [Propionibacterium acnes HL110PA3]
gi|422565346|ref|ZP_16640995.1| ribosome recycling factor [Propionibacterium acnes HL082PA2]
gi|422575396|ref|ZP_16650937.1| ribosome recycling factor [Propionibacterium acnes HL001PA1]
gi|282582249|gb|EFB87631.1| ribosome recycling factor [Propionibacterium acnes J139]
gi|314923764|gb|EFS87595.1| ribosome recycling factor [Propionibacterium acnes HL001PA1]
gi|314966222|gb|EFT10321.1| ribosome recycling factor [Propionibacterium acnes HL082PA2]
gi|314981988|gb|EFT26081.1| ribosome recycling factor [Propionibacterium acnes HL110PA3]
gi|315090899|gb|EFT62875.1| ribosome recycling factor [Propionibacterium acnes HL110PA4]
gi|315095112|gb|EFT67088.1| ribosome recycling factor [Propionibacterium acnes HL060PA1]
gi|315104341|gb|EFT76317.1| ribosome recycling factor [Propionibacterium acnes HL050PA2]
gi|327328110|gb|EGE69879.1| ribosome recycling factor [Propionibacterium acnes HL103PA1]
gi|353454131|gb|AER04650.1| ribosome recycling factor [Propionibacterium acnes ATCC 11828]
Length = 184
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 60/126 (47%), Positives = 86/126 (68%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
S I KD + +M +D R F ++RTGR+NPAM +K+ VEYYG+P L+ +A P++
Sbjct: 2 SDIIKDAEKKMGSAVDHAREEFAAIRTGRANPAMFNKLMVEYYGTPTPLQQLASFQVPEA 61
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
++LI P+DKS + +EKAI SDLG+ P+NDG V+R LP LT ERRKE K+ +AE
Sbjct: 62 RTVLIAPFDKSCVNDVEKAIRDSDLGVNPSNDGNVVRCVLPALTEERRKEYIKMAKTKAE 121
Query: 214 EGKVVM 219
EG++ +
Sbjct: 122 EGRIAV 127
>gi|15614987|ref|NP_243290.1| ribosome recycling factor [Bacillus halodurans C-125]
gi|14195173|sp|Q9KA66.3|RRF_BACHD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|10175044|dbj|BAB06143.1| ribosome recycling factor [Bacillus halodurans C-125]
Length = 185
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 62/121 (51%), Positives = 87/121 (71%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + RM + + + +R GR+NPAMLD+I VEYYG+ L +A I+ P++ L+I
Sbjct: 8 DAEQRMTKATEALGRELAKLRAGRANPAMLDRITVEYYGAETPLNQLATISVPEARLLVI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QP+DKSS+ IE+AI SDLG+TP+NDG VIR+T+P LT ERR++L+K+V K AEE KV
Sbjct: 68 QPFDKSSISDIERAIQKSDLGLTPSNDGTVIRITIPPLTEERRRDLTKLVKKSAEEAKVA 127
Query: 219 M 219
+
Sbjct: 128 V 128
>gi|359685181|ref|ZP_09255182.1| ribosome recycling factor [Leptospira santarosai str. 2000030832]
gi|410449036|ref|ZP_11303102.1| ribosome recycling factor [Leptospira sp. Fiocruz LV3954]
gi|418743918|ref|ZP_13300277.1| ribosome recycling factor [Leptospira santarosai str. CBC379]
gi|418751621|ref|ZP_13307905.1| ribosome recycling factor [Leptospira santarosai str. MOR084]
gi|421110556|ref|ZP_15571051.1| ribosome recycling factor [Leptospira santarosai str. JET]
gi|422004622|ref|ZP_16351837.1| ribosome recycling factor [Leptospira santarosai serovar Shermani
str. LT 821]
gi|409968094|gb|EKO35907.1| ribosome recycling factor [Leptospira santarosai str. MOR084]
gi|410017156|gb|EKO79222.1| ribosome recycling factor [Leptospira sp. Fiocruz LV3954]
gi|410795313|gb|EKR93210.1| ribosome recycling factor [Leptospira santarosai str. CBC379]
gi|410804152|gb|EKS10275.1| ribosome recycling factor [Leptospira santarosai str. JET]
gi|417256676|gb|EKT86092.1| ribosome recycling factor [Leptospira santarosai serovar Shermani
str. LT 821]
gi|456875954|gb|EMF91134.1| ribosome recycling factor [Leptospira santarosai str. ST188]
Length = 184
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 58/120 (48%), Positives = 91/120 (75%)
Query: 100 VKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQ 159
+KA+M++TID+V+ +F ++RTGR+NP++++ I V+YYG+ + + I+ P+ L+I
Sbjct: 10 MKAKMDKTIDLVKKDFGTIRTGRANPSLVEDIRVDYYGTLTPINQLGNISVPEPRMLVIS 69
Query: 160 PYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
PYDK +K IEKAI +S LG+ P+NDG VIR+ +P+LT ERRKEL+KVV ++E+ KV +
Sbjct: 70 PYDKGIMKDIEKAIQTSGLGLQPSNDGVVIRIVIPELTGERRKELAKVVKSKSEDKKVAI 129
>gi|406837424|ref|ZP_11097018.1| ribosome recycling factor [Lactobacillus vini DSM 20605]
Length = 187
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 92/122 (75%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
++ + +M++ ++ + +R GR+N ++L++I+V+YYG+P L +AQI P++ LL
Sbjct: 9 QNAQEKMKKAEQALQRDLGGIRAGRANASLLNRIKVDYYGAPTPLNQLAQITIPEARVLL 68
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
++P+DKS+LK IE+AI++SDLG++P NDG IRL +PQLT ERRKEL+K V +AE+GKV
Sbjct: 69 VKPFDKSALKEIERAILASDLGISPTNDGTAIRLVIPQLTEERRKELAKQVKAEAEKGKV 128
Query: 218 VM 219
+
Sbjct: 129 AV 130
>gi|404329110|ref|ZP_10969558.1| ribosome recycling factor [Sporolactobacillus vineae DSM 21990 =
SL153]
Length = 186
Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 61/127 (48%), Positives = 91/127 (71%)
Query: 93 KSSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPD 152
+ S+ K+ + RM++++ + ++R GR+NP++L+K+ VEYYG+ LK IA + P+
Sbjct: 3 QDSVLKEARERMDKSVKSFQRELVTIRAGRANPSLLNKVTVEYYGAETPLKQIASVTAPE 62
Query: 153 SSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQA 212
+ LLIQPYD+++L +IE+ I+ SDLG+TP NDG VIR+ +P LT ERR EL KVV K A
Sbjct: 63 ARLLLIQPYDRNALANIERGILKSDLGITPTNDGTVIRIAIPPLTEERRAELVKVVHKFA 122
Query: 213 EEGKVVM 219
EE KV +
Sbjct: 123 EEAKVAV 129
>gi|366166649|ref|ZP_09466404.1| ribosome recycling factor [Acetivibrio cellulolyticus CD2]
Length = 185
Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 87/122 (71%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K ++ +M++TI++++ VR GR+NPA+LDK+ V+YYG+P + IA ++ P+ ++
Sbjct: 7 KSIEEKMKKTINVLKDELTGVRAGRANPAILDKLTVDYYGTPTPINQIASVSVPEGRVIM 66
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
IQP++ +K IEK I SD+G+ PNNDG+VIRL P LT ERRKEL+KVV K E+ KV
Sbjct: 67 IQPWEAKMIKEIEKEIQKSDIGINPNNDGKVIRLVFPMLTEERRKELTKVVKKYGEDAKV 126
Query: 218 VM 219
+
Sbjct: 127 AI 128
>gi|260892482|ref|YP_003238579.1| ribosome recycling factor [Ammonifex degensii KC4]
gi|260864623|gb|ACX51729.1| ribosome recycling factor [Ammonifex degensii KC4]
Length = 184
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 58/116 (50%), Positives = 87/116 (75%)
Query: 104 MERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDK 163
M++ ++ + + ++RTGR++PA+L+K+ V+YYG P + +A I P+ L+IQP+D+
Sbjct: 12 MKKAVEHFKKDLAAIRTGRASPALLEKVMVDYYGVPTPVNQLATITAPEPRLLVIQPWDR 71
Query: 164 SSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
S + IEKAI+ SDLG+TPNNDG+VIRL LPQLT ERR+EL +V K+AEE +V +
Sbjct: 72 SIINEIEKAILKSDLGLTPNNDGQVIRLILPQLTQERREELVRVARKRAEEARVAI 127
>gi|227890626|ref|ZP_04008431.1| ribosome recycling factor, RRF [Lactobacillus salivarius ATCC
11741]
gi|301300274|ref|ZP_07206483.1| ribosome recycling factor [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|227867564|gb|EEJ74985.1| ribosome recycling factor, RRF [Lactobacillus salivarius ATCC
11741]
gi|300852115|gb|EFK79790.1| ribosome recycling factor [Lactobacillus salivarius
ACS-116-V-Col5a]
Length = 187
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 62/122 (50%), Positives = 88/122 (72%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K+ + +M + D +R ++R GR+N ++L++I VEYYG+P L +AQI+ P++ LL
Sbjct: 9 KEAQEKMTKAEDSLRRELGNIRAGRANASLLNRINVEYYGAPTPLNQMAQISVPEARVLL 68
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
+ PYDKSSLK+IE AI++SDLG+ P NDG IRL +PQLT ERRKEL+K V +E GKV
Sbjct: 69 VTPYDKSSLKNIEHAIMASDLGIAPMNDGTAIRLVIPQLTEERRKELAKQVKAVSETGKV 128
Query: 218 VM 219
+
Sbjct: 129 AV 130
>gi|347548704|ref|YP_004855032.1| putative ribosome recycling factors [Listeria ivanovii subsp.
ivanovii PAM 55]
gi|346981775|emb|CBW85748.1| Putative ribosome recycling factors [Listeria ivanovii subsp.
ivanovii PAM 55]
Length = 185
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 61/119 (51%), Positives = 86/119 (72%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K +ME+ + ++R GR+N ++LD++ V+YYG+P + +A I+ P++ LLI P
Sbjct: 10 KEKMEKAEQALTRQLGTIRAGRANASLLDRLTVDYYGAPTPVNQMASISVPEARMLLITP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
YDK+ L IEKAI+ SDLG+TPNNDG V+RL++PQLT ERRKEL K V K+AEE KV +
Sbjct: 70 YDKTILGEIEKAILKSDLGLTPNNDGSVLRLSIPQLTEERRKELVKEVKKEAEEAKVAV 128
>gi|373106056|ref|ZP_09520361.1| ribosome recycling factor [Stomatobaculum longum]
gi|371653303|gb|EHO18703.1| ribosome recycling factor [Stomatobaculum longum]
Length = 187
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 89/122 (72%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K+++ RM +TI ++ F+++R GR+NP +LD+I V+YYG+ L+ + ++ P++ +L
Sbjct: 9 KELEDRMNKTISFMQEEFSAIRAGRANPHVLDRITVDYYGTQTPLQQVGNVSVPEARMIL 68
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
IQP+DKS LK IEKAI++SDLG+ P NDG VIRL P+LT ERRK L+K + K+ E KV
Sbjct: 69 IQPWDKSLLKEIEKAILTSDLGINPTNDGSVIRLLFPELTEERRKALTKDIRKKGEAAKV 128
Query: 218 VM 219
+
Sbjct: 129 AV 130
>gi|313893396|ref|ZP_07826968.1| ribosome recycling factor [Veillonella sp. oral taxon 158 str.
F0412]
gi|313442037|gb|EFR60457.1| ribosome recycling factor [Veillonella sp. oral taxon 158 str.
F0412]
Length = 186
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 60/117 (51%), Positives = 88/117 (75%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
RM ++I+ ++ F S+RTGR++ A+LDK+ V+YYGSP + +A I+ P+ ++I P+D
Sbjct: 13 RMNKSIEALKHEFASIRTGRASVALLDKVMVDYYGSPSPINQVANISVPEPRMIVIAPWD 72
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
K+ + +IEKAI+ SDLG+ P NDG IRLT+PQLT ERRKE+ KVV K+AE+ KV +
Sbjct: 73 KTMIGAIEKAILQSDLGLNPGNDGAQIRLTIPQLTEERRKEIVKVVHKKAEDAKVAV 129
>gi|163119440|ref|YP_079046.2| ribosome recycling factor [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|319645965|ref|ZP_08000195.1| ribosome-recycling factor [Bacillus sp. BT1B_CT2]
gi|404489143|ref|YP_006713249.1| ribosome recycling factor [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|423682197|ref|ZP_17657036.1| ribosome recycling factor [Bacillus licheniformis WX-02]
gi|60390243|sp|Q65JJ6.1|RRF_BACLD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|52348134|gb|AAU40768.1| ribosome-recycling factor Frr [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|145902947|gb|AAU23408.2| ribosome recycling factor [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|317391715|gb|EFV72512.1| ribosome-recycling factor [Bacillus sp. BT1B_CT2]
gi|383438971|gb|EID46746.1| ribosome recycling factor [Bacillus licheniformis WX-02]
Length = 185
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 61/121 (50%), Positives = 87/121 (71%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+ K RM++ I + +VR GR+NP++LDK+ VEYYG+ L IA I P++ L+I
Sbjct: 8 ETKERMQKAISAYQRELATVRAGRANPSLLDKVAVEYYGAQTPLNQIASITVPEARMLVI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
PYDK++L IEKAI +DLG+TP+NDG +IR+T+P LT ERRKEL+K+V K +E+ KV
Sbjct: 68 TPYDKTALGDIEKAIQKADLGVTPSNDGNIIRITIPPLTEERRKELAKLVKKYSEDAKVA 127
Query: 219 M 219
+
Sbjct: 128 V 128
>gi|240146850|ref|ZP_04745451.1| ribosome recycling factor [Roseburia intestinalis L1-82]
gi|257200994|gb|EEU99278.1| ribosome recycling factor [Roseburia intestinalis L1-82]
gi|291536044|emb|CBL09156.1| ribosome recycling factor [Roseburia intestinalis M50/1]
gi|291538537|emb|CBL11648.1| ribosome recycling factor [Roseburia intestinalis XB6B4]
Length = 184
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 88/117 (75%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M++T++ + F S+R GR+NP +LDK++V+YYG+P +++ +A +N P+ + IQP++
Sbjct: 11 KMQKTMNNLSEEFGSIRAGRANPHVLDKLKVDYYGTPTAIQQVANVNVPEPRMIQIQPWE 70
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
S +K IEKAI++SDLG+ P NDG+VIRL P+LT ERRKEL+K V K+ E KV +
Sbjct: 71 ASMVKEIEKAILTSDLGINPTNDGKVIRLLFPELTEERRKELAKDVKKKGENAKVAI 127
>gi|119963211|ref|YP_947274.1| ribosome recycling factor [Arthrobacter aurescens TC1]
gi|403526487|ref|YP_006661374.1| ribosome-recycling factor Frr [Arthrobacter sp. Rue61a]
gi|171704626|sp|A1R4W2.1|RRF_ARTAT RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|119950070|gb|ABM08981.1| ribosome recycling factor [Arthrobacter aurescens TC1]
gi|403228914|gb|AFR28336.1| ribosome-recycling factor Frr [Arthrobacter sp. Rue61a]
Length = 185
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 87/115 (75%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M++ +++ + +F S+RTGR+NPA+ +K+ VEYYG+P L+ +A PD+ ++LI PYD
Sbjct: 12 KMDKAVEVAKDDFASIRTGRANPALYNKVIVEYYGTPTPLQQLASFGVPDARTILITPYD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
K++L+ IEKA+ S++G P+NDG VIR+T+P+LT ERRKE K+V + E+ KV
Sbjct: 72 KTALRDIEKALSDSEVGANPSNDGNVIRVTIPELTKERRKEYVKIVKGKGEDAKV 126
>gi|220931612|ref|YP_002508520.1| ribosome recycling factor [Halothermothrix orenii H 168]
gi|254809515|sp|B8CW56.1|RRF_HALOH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|219992922|gb|ACL69525.1| ribosome recycling factor [Halothermothrix orenii H 168]
Length = 185
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 56/125 (44%), Positives = 96/125 (76%)
Query: 95 SIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSS 154
+EK+ K +ME+ ++ + + N+VRTGR+ P++++ I V+YYG+ ++ +A++ P++
Sbjct: 4 QVEKNAKQKMEKVLEATKHDLNTVRTGRARPSLVENIMVDYYGTQTPIQQMAKVVAPEAR 63
Query: 155 SLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEE 214
L+I+P+DKS ++SIEKAI+ S+LG+ P+NDG VIR+ +PQLT ERRKEL KV ++AE+
Sbjct: 64 QLVIEPWDKSVIESIEKAILKSNLGLNPSNDGNVIRINIPQLTEERRKELVKVAHEKAEK 123
Query: 215 GKVVM 219
G++ +
Sbjct: 124 GRIAI 128
>gi|335038956|ref|ZP_08532150.1| Ribosome-recycling factor [Caldalkalibacillus thermarum TA2.A1]
gi|334181155|gb|EGL83726.1| Ribosome-recycling factor [Caldalkalibacillus thermarum TA2.A1]
Length = 185
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 90/122 (73%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
++ + RM++ ++ ++T S+R GR+ PA+LDK+ V+YYG+ + +A I+ P+ L
Sbjct: 7 QNARERMDKAVNQLKTELASLRAGRATPALLDKVYVDYYGTQTPVNQLANISAPEPRLLT 66
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
IQP+DKS+L +IEKAI+ S+LG+TPNNDG +IR+T+P LT ERR+EL K+V K E+ KV
Sbjct: 67 IQPWDKSALDAIEKAILKSELGLTPNNDGNIIRITIPALTEERRQELVKMVKKYGEDAKV 126
Query: 218 VM 219
+
Sbjct: 127 AI 128
>gi|317056783|ref|YP_004105250.1| ribosome recycling factor [Ruminococcus albus 7]
gi|315449052|gb|ADU22616.1| ribosome recycling factor [Ruminococcus albus 7]
Length = 184
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 59/124 (47%), Positives = 93/124 (75%)
Query: 96 IEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSS 155
I+ K +ME++++++ ++F ++R GR+NPA+LDK++V+YYGSP + +A ++ ++
Sbjct: 4 IKNKAKEKMEKSVNVMLSDFAAIRAGRANPAVLDKVKVDYYGSPTPVNQMAAVSVAEARI 63
Query: 156 LLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEG 215
L+I P+DKS+LKSIEKAI +SD+G+ P NDG+ IRL PQLT +RRKE+ K V K E+
Sbjct: 64 LVITPWDKSTLKSIEKAIQASDIGINPQNDGQTIRLIFPQLTEDRRKEIVKDVKKGGEDT 123
Query: 216 KVVM 219
KV +
Sbjct: 124 KVAV 127
>gi|24215994|ref|NP_713475.1| ribosome recycling factor [Leptospira interrogans serovar Lai str.
56601]
gi|45656744|ref|YP_000830.1| ribosome recycling factor [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|386075082|ref|YP_005989401.1| ribosome recycling factor [Leptospira interrogans serovar Lai str.
IPAV]
gi|417760664|ref|ZP_12408681.1| ribosome recycling factor [Leptospira interrogans str. 2002000624]
gi|417764373|ref|ZP_12412340.1| ribosome recycling factor [Leptospira interrogans serovar Bulgarica
str. Mallika]
gi|417774913|ref|ZP_12422775.1| ribosome recycling factor [Leptospira interrogans str. 2002000621]
gi|417784181|ref|ZP_12431890.1| ribosome recycling factor [Leptospira interrogans str. C10069]
gi|418668199|ref|ZP_13229602.1| ribosome recycling factor [Leptospira interrogans serovar Pyrogenes
str. 2006006960]
gi|418674551|ref|ZP_13235853.1| ribosome recycling factor [Leptospira interrogans str. 2002000623]
gi|418690550|ref|ZP_13251662.1| ribosome recycling factor [Leptospira interrogans str. FPW2026]
gi|418694863|ref|ZP_13255891.1| ribosome recycling factor [Leptospira kirschneri str. H1]
gi|418701716|ref|ZP_13262638.1| ribosome recycling factor [Leptospira interrogans serovar Bataviae
str. L1111]
gi|418705768|ref|ZP_13266627.1| ribosome recycling factor [Leptospira interrogans serovar
Hebdomadis str. R499]
gi|418707324|ref|ZP_13268150.1| ribosome recycling factor [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
gi|418727628|ref|ZP_13286216.1| ribosome recycling factor [Leptospira interrogans str. UI 12621]
gi|421084309|ref|ZP_15545172.1| ribosome recycling factor [Leptospira santarosai str. HAI1594]
gi|421102959|ref|ZP_15563561.1| ribosome recycling factor [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|421109231|ref|ZP_15569755.1| ribosome recycling factor [Leptospira kirschneri str. H2]
gi|421121325|ref|ZP_15581622.1| ribosome recycling factor [Leptospira interrogans str. Brem 329]
gi|421126954|ref|ZP_15587178.1| ribosome recycling factor [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|421136047|ref|ZP_15596158.1| ribosome recycling factor [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|34924967|sp|Q8F143.1|RRF_LEPIN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|59798561|sp|Q72U11.1|RRF_LEPIC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|24197218|gb|AAN50493.1|AE011490_8 ribosome recycling factor [Leptospira interrogans serovar Lai str.
56601]
gi|45599980|gb|AAS69467.1| ribosome recycling factor [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|353458873|gb|AER03418.1| ribosome recycling factor [Leptospira interrogans serovar Lai str.
IPAV]
gi|400352817|gb|EJP04993.1| ribosome recycling factor [Leptospira interrogans serovar Bulgarica
str. Mallika]
gi|400360300|gb|EJP16276.1| ribosome recycling factor [Leptospira interrogans str. FPW2026]
gi|409943584|gb|EKN89184.1| ribosome recycling factor [Leptospira interrogans str. 2002000624]
gi|409952645|gb|EKO07155.1| ribosome recycling factor [Leptospira interrogans str. C10069]
gi|409957333|gb|EKO16246.1| ribosome recycling factor [Leptospira kirschneri str. H1]
gi|409958986|gb|EKO22763.1| ribosome recycling factor [Leptospira interrogans str. UI 12621]
gi|410005751|gb|EKO59538.1| ribosome recycling factor [Leptospira kirschneri str. H2]
gi|410019781|gb|EKO86595.1| ribosome recycling factor [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|410345759|gb|EKO96829.1| ribosome recycling factor [Leptospira interrogans str. Brem 329]
gi|410367274|gb|EKP22660.1| ribosome recycling factor [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410433209|gb|EKP77557.1| ribosome recycling factor [Leptospira santarosai str. HAI1594]
gi|410435044|gb|EKP84176.1| ribosome recycling factor [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|410575254|gb|EKQ38274.1| ribosome recycling factor [Leptospira interrogans str. 2002000621]
gi|410578442|gb|EKQ46301.1| ribosome recycling factor [Leptospira interrogans str. 2002000623]
gi|410756056|gb|EKR17683.1| ribosome recycling factor [Leptospira interrogans serovar Pyrogenes
str. 2006006960]
gi|410759280|gb|EKR25495.1| ribosome recycling factor [Leptospira interrogans serovar Bataviae
str. L1111]
gi|410764600|gb|EKR35308.1| ribosome recycling factor [Leptospira interrogans serovar
Hebdomadis str. R499]
gi|410772371|gb|EKR47559.1| ribosome recycling factor [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
gi|455790879|gb|EMF42721.1| ribosome recycling factor [Leptospira interrogans serovar Lora str.
TE 1992]
gi|456823069|gb|EMF71539.1| ribosome recycling factor [Leptospira interrogans serovar Canicola
str. LT1962]
gi|456968808|gb|EMG09948.1| ribosome recycling factor [Leptospira interrogans serovar
Grippotyphosa str. LT2186]
gi|456984585|gb|EMG20607.1| ribosome recycling factor [Leptospira interrogans serovar
Copenhageni str. LT2050]
Length = 184
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 58/120 (48%), Positives = 89/120 (74%)
Query: 100 VKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQ 159
+K +M++TID+V+ +F ++RTGR+NP++++ I V+YYG+ + + I+ P+ L+I
Sbjct: 10 MKTKMDKTIDLVKKDFGTIRTGRANPSLVEDIRVDYYGNQTPINQLGNISVPEPRMLVIS 69
Query: 160 PYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
PYDK +K IEKAI +S LG+ P NDG VIR+ +P+LT ERRKEL+KVV ++EE KV +
Sbjct: 70 PYDKGIMKDIEKAIQTSGLGLQPTNDGVVIRIVIPELTGERRKELAKVVKSKSEEKKVAI 129
>gi|342216828|ref|ZP_08709475.1| ribosome recycling factor [Peptoniphilus sp. oral taxon 375 str.
F0436]
gi|341587718|gb|EGS31118.1| ribosome recycling factor [Peptoniphilus sp. oral taxon 375 str.
F0436]
Length = 185
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 60/126 (47%), Positives = 88/126 (69%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
S I+ D RM++TI ++ + ++R GR+NP +LD+I V+YYG L +A I+ P+
Sbjct: 3 SDIKNDATGRMKKTIQVLEEDLQAIRAGRANPTLLDRIHVDYYGQSTPLNQMAGISAPEP 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
L IQP+D +++ IEKAI+ SDLG+ P+NDG+++RL +PQLT ERRKEL KVV K E
Sbjct: 63 RLLTIQPWDANAIPEIEKAILKSDLGLNPSNDGKLVRLVIPQLTEERRKELIKVVKKDGE 122
Query: 214 EGKVVM 219
+ KV +
Sbjct: 123 DSKVAI 128
>gi|417770633|ref|ZP_12418539.1| ribosome recycling factor [Leptospira interrogans serovar Pomona
str. Pomona]
gi|418680693|ref|ZP_13241937.1| ribosome recycling factor [Leptospira interrogans serovar Pomona
str. Kennewicki LC82-25]
gi|418712134|ref|ZP_13272879.1| ribosome recycling factor [Leptospira interrogans str. UI 08452]
gi|418728060|ref|ZP_13286640.1| ribosome recycling factor [Leptospira interrogans str. UI 12758]
gi|421117600|ref|ZP_15577959.1| ribosome recycling factor [Leptospira interrogans serovar Canicola
str. Fiocruz LV133]
gi|400327637|gb|EJO79882.1| ribosome recycling factor [Leptospira interrogans serovar Pomona
str. Kennewicki LC82-25]
gi|409947405|gb|EKN97403.1| ribosome recycling factor [Leptospira interrogans serovar Pomona
str. Pomona]
gi|410010814|gb|EKO68946.1| ribosome recycling factor [Leptospira interrogans serovar Canicola
str. Fiocruz LV133]
gi|410777105|gb|EKR57073.1| ribosome recycling factor [Leptospira interrogans str. UI 12758]
gi|410791401|gb|EKR85077.1| ribosome recycling factor [Leptospira interrogans str. UI 08452]
gi|455669726|gb|EMF34787.1| ribosome recycling factor [Leptospira interrogans serovar Pomona
str. Fox 32256]
Length = 184
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 58/120 (48%), Positives = 89/120 (74%)
Query: 100 VKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQ 159
+K +M++TID+V+ +F ++RTGR+NP++++ I V+YYG+ + + I+ P+ L+I
Sbjct: 10 MKTKMDKTIDLVKKDFGTIRTGRANPSLVEDIRVDYYGNQTPINQLGNISVPEPRMLVIS 69
Query: 160 PYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
PYDK +K IEKAI +S LG+ P NDG VIR+ +P+LT ERRKEL+KVV ++EE KV +
Sbjct: 70 PYDKGIMKDIEKAIQTSGLGLQPTNDGVVIRIVIPELTGERRKELAKVVKSKSEEKKVAI 129
>gi|365174550|ref|ZP_09361992.1| ribosome recycling factor [Synergistes sp. 3_1_syn1]
gi|363614567|gb|EHL66054.1| ribosome recycling factor [Synergistes sp. 3_1_syn1]
Length = 185
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 96/122 (78%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K++ +R E++I+ ++ + VRTGR++PA++++I+V+Y+G+P +K++ +N P++ ++
Sbjct: 7 KELTSRCEKSIEHLKGSMLGVRTGRAHPALVEEIKVDYFGTPTPIKNMGSVNVPEARQIV 66
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
I P+DK+++K+IEKAI SS LG+TP NDGE IRL LP+LT +RR EL K+V K AEEG+V
Sbjct: 67 ITPWDKTAMKAIEKAIQSSSLGITPQNDGESIRLNLPELTQQRRVELKKMVNKMAEEGRV 126
Query: 218 VM 219
+
Sbjct: 127 AV 128
>gi|238019366|ref|ZP_04599792.1| hypothetical protein VEIDISOL_01230 [Veillonella dispar ATCC 17748]
gi|237864065|gb|EEP65355.1| hypothetical protein VEIDISOL_01230 [Veillonella dispar ATCC 17748]
Length = 186
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 60/117 (51%), Positives = 88/117 (75%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
RM ++I+ ++ F S+RTGR++ A+LDK+ V+YYGSP + +A I+ P+ ++I P+D
Sbjct: 13 RMNKSIEALKHEFASIRTGRASVALLDKVMVDYYGSPSPINQVANISVPEPRMIVIAPWD 72
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
K+ + +IEKAI+ SDLG+ P NDG IRLT+PQLT ERRKE+ KVV K+AE+ KV +
Sbjct: 73 KTMIGAIEKAILQSDLGLNPGNDGAQIRLTIPQLTEERRKEIVKVVHKKAEDAKVAV 129
>gi|221194591|ref|ZP_03567648.1| ribosome recycling factor [Atopobium rimae ATCC 49626]
gi|221185495|gb|EEE17885.1| ribosome recycling factor [Atopobium rimae ATCC 49626]
Length = 181
Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 61/119 (51%), Positives = 87/119 (73%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
KA M++ I+ ++ NF VRTGR+NP LD I+V+YYG P + +A + P++S L+I+P
Sbjct: 9 KASMDKGIEALKNNFARVRTGRANPHALDPIKVDYYGQPTPIMQLAAVKVPEASLLVIEP 68
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
+DK+SLK+IEKAI +SDLG+TP+NDG IRL P T ERR+EL+K A AEE ++ +
Sbjct: 69 WDKTSLKAIEKAIEASDLGITPSNDGATIRLPFPMPTEERRRELAKECAGLAEEARIAI 127
>gi|365840022|ref|ZP_09381236.1| ribosome recycling factor [Anaeroglobus geminatus F0357]
gi|364562761|gb|EHM40593.1| ribosome recycling factor [Anaeroglobus geminatus F0357]
Length = 186
Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 59/117 (50%), Positives = 87/117 (74%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+ ++TI+ R N S+RTGR++ ++LD++ V+YYG+P + +A I+ P+ L I P+D
Sbjct: 13 KTDKTIETFRRNLASIRTGRASTSLLDRVTVDYYGTPTPVNQVANISAPEPRLLTISPWD 72
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
++ L IEKA++ SDLG+ PNNDG +IRL +PQLT ERRKELSK V+K+AEE KV +
Sbjct: 73 RTMLGEIEKAVLKSDLGLNPNNDGTIIRLEIPQLTEERRKELSKKVSKEAEEAKVAV 129
>gi|429205340|ref|ZP_19196617.1| ribosome recycling factor [Lactobacillus saerimneri 30a]
gi|428146412|gb|EKW98651.1| ribosome recycling factor [Lactobacillus saerimneri 30a]
Length = 187
Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 89/122 (72%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K+ + RM +T D +R +R GR+N ++L+++ V YYG+P L +AQI P++ LL
Sbjct: 9 KENQERMAKTEDALRRELGKIRAGRANASLLNQVMVNYYGAPTPLNQMAQITVPEARVLL 68
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
+ PYDKSSLK +E A+++++LG++P NDG+VIRL +PQLT ERRKE++K V +AEE KV
Sbjct: 69 VNPYDKSSLKDVEHALLAANLGISPANDGDVIRLVIPQLTEERRKEIAKEVKAKAEEAKV 128
Query: 218 VM 219
+
Sbjct: 129 AI 130
>gi|347750466|ref|YP_004858031.1| ribosome recycling factor [Bacillus coagulans 36D1]
gi|347582984|gb|AEO99250.1| ribosome recycling factor [Bacillus coagulans 36D1]
Length = 186
Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 86/119 (72%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K +M + I + S+R GR+N A+LDKI ++YYG+ + +A I+ P++ ++IQP
Sbjct: 11 KDKMAKAIQAFQRELGSIRAGRANAALLDKITIDYYGARTPVNQLASISVPEARLMVIQP 70
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
YDK+ L IE+AI+ SDLG+TPNNDG VIRL++P LT ERRKEL K++ K+AEE KV +
Sbjct: 71 YDKTVLGEIERAILKSDLGLTPNNDGSVIRLSIPPLTEERRKELVKLIKKEAEEAKVAI 129
>gi|167756899|ref|ZP_02429026.1| hypothetical protein CLORAM_02448 [Clostridium ramosum DSM 1402]
gi|167703074|gb|EDS17653.1| ribosome recycling factor [Clostridium ramosum DSM 1402]
Length = 193
Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 63/119 (52%), Positives = 83/119 (69%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D RM +TI+ + + +SVRTGR+NP MLD++ V YYGSP + IA I+ + L+I
Sbjct: 20 DTNERMTKTIESFQRDLSSVRTGRANPNMLDRVMVNYYGSPTPVNQIAGISVVEGRQLVI 79
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
+PYDKSS+K IE I +DLG+TP NDGE+IR+ +P LT ERRKE +K V K AE KV
Sbjct: 80 KPYDKSSIKDIEHGIYEADLGLTPQNDGEIIRIMVPALTEERRKEFAKNVWKFAENAKV 138
>gi|350567652|ref|ZP_08936060.1| ribosome recycling factor [Propionibacterium avidum ATCC 25577]
gi|348662415|gb|EGY79078.1| ribosome recycling factor [Propionibacterium avidum ATCC 25577]
Length = 184
Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 59/126 (46%), Positives = 86/126 (68%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
S I KD + +M +D R F ++RTGR+NPAM +KI V+YYG+P L+ +A P++
Sbjct: 2 SDIIKDAEKKMGSAVDHAREEFAAIRTGRANPAMFNKIMVDYYGAPTPLQQLASFQVPEA 61
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
++LI P+DKS + +EKA+ SDLG+ P+NDG V+R LP LT ERRKE K+ +AE
Sbjct: 62 RTVLIAPFDKSCVNEVEKAVRDSDLGVNPSNDGNVVRCVLPALTEERRKEYIKMAKAKAE 121
Query: 214 EGKVVM 219
EG++ +
Sbjct: 122 EGRIAV 127
>gi|237734608|ref|ZP_04565089.1| flagellar biosynthetic protein flhB [Mollicutes bacterium D7]
gi|365832619|ref|ZP_09374150.1| ribosome recycling factor [Coprobacillus sp. 3_3_56FAA]
gi|374625638|ref|ZP_09698054.1| ribosome recycling factor [Coprobacillus sp. 8_2_54BFAA]
gi|229382428|gb|EEO32519.1| flagellar biosynthetic protein flhB [Coprobacillus sp. D7]
gi|365260198|gb|EHM90163.1| ribosome recycling factor [Coprobacillus sp. 3_3_56FAA]
gi|373915298|gb|EHQ47069.1| ribosome recycling factor [Coprobacillus sp. 8_2_54BFAA]
Length = 181
Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 63/119 (52%), Positives = 83/119 (69%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D RM +TI+ + + +SVRTGR+NP MLD++ V YYGSP + IA I+ + L+I
Sbjct: 8 DTNERMTKTIESFQRDLSSVRTGRANPNMLDRVMVNYYGSPTPVNQIAGISVVEGRQLVI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
+PYDKSS+K IE I +DLG+TP NDGE+IR+ +P LT ERRKE +K V K AE KV
Sbjct: 68 KPYDKSSIKDIEHGIYEADLGLTPQNDGEIIRIMVPALTEERRKEFAKNVWKFAENAKV 126
>gi|383753427|ref|YP_005432330.1| putative ribosome-recycling factor [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381365479|dbj|BAL82307.1| putative ribosome-recycling factor [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 185
Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 86/117 (73%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
RM+++ID ++ F S+R GR+ P++LDK+ V+YYG+P + IA++ P+ ++IQPY+
Sbjct: 12 RMQKSIDALKREFGSLRAGRATPSLLDKVMVDYYGTPTPVNQIAKVAVPEPRMIMIQPYE 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
KS L +E AI+ SDLG++PN+DG IRL +P LT ERR+EL K V K+AEE KV +
Sbjct: 72 KSMLHEVEVAIMKSDLGLSPNSDGTAIRLAIPALTQERRQELVKTVNKKAEEAKVAI 128
>gi|323359725|ref|YP_004226121.1| ribosome recycling factor [Microbacterium testaceum StLB037]
gi|323276096|dbj|BAJ76241.1| ribosome recycling factor [Microbacterium testaceum StLB037]
Length = 184
Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 59/120 (49%), Positives = 87/120 (72%), Gaps = 1/120 (0%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D ARM+R ++ + +F +VRTGR+NP M K+ V+YYGSP L +A +N P++ +L+I
Sbjct: 8 DAGARMDRAVEAAKEDFATVRTGRANPQMFQKVLVDYYGSPTPLAQLASLNNPEARTLVI 67
Query: 159 QPYDKSSLKSIEKAIVS-SDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
PYDKS+LK+IE+AI +LG+ P NDG ++R+T+P+LT ERRKE K+V + E+ KV
Sbjct: 68 NPYDKSALKAIEQAIRDMPNLGVNPTNDGNIVRITMPELTEERRKEYVKLVRGKGEDAKV 127
>gi|116327676|ref|YP_797396.1| ribosome recycling factor [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
gi|116330591|ref|YP_800309.1| ribosome recycling factor [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
gi|418721009|ref|ZP_13280197.1| ribosome recycling factor [Leptospira borgpetersenii str. UI 09149]
gi|418734913|ref|ZP_13291325.1| ribosome recycling factor [Leptospira borgpetersenii serovar
Castellonis str. 200801910]
gi|421095964|ref|ZP_15556672.1| ribosome recycling factor [Leptospira borgpetersenii str.
200801926]
gi|122281654|sp|Q04U69.1|RRF_LEPBJ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|122284528|sp|Q053N2.1|RRF_LEPBL RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|116120420|gb|ABJ78463.1| Ribosome recycling factor [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
gi|116124280|gb|ABJ75551.1| Ribosome recycling factor [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
gi|410361379|gb|EKP12424.1| ribosome recycling factor [Leptospira borgpetersenii str.
200801926]
gi|410742488|gb|EKQ91236.1| ribosome recycling factor [Leptospira borgpetersenii str. UI 09149]
gi|410749169|gb|EKR02061.1| ribosome recycling factor [Leptospira borgpetersenii serovar
Castellonis str. 200801910]
gi|456890839|gb|EMG01623.1| ribosome recycling factor [Leptospira borgpetersenii str.
200701203]
Length = 184
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 58/120 (48%), Positives = 90/120 (75%)
Query: 100 VKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQ 159
+K +M++TID+V+ +F +VRTGR+NP++++ I V+YYG+ + + I+ P+ L+I
Sbjct: 10 MKTKMDKTIDLVKKDFGTVRTGRANPSLVEDIRVDYYGTLTPINQLGNISVPEPRMLVIS 69
Query: 160 PYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
PYDK +K IEKAI +S LG+ P+NDG VIR+ +P+LT ERRKEL+K+V ++EE KV +
Sbjct: 70 PYDKGIMKDIEKAIQASGLGLQPSNDGVVIRIIIPELTGERRKELAKIVKSKSEEKKVAI 129
>gi|226313032|ref|YP_002772926.1| ribosome recycling factor [Brevibacillus brevis NBRC 100599]
gi|254809495|sp|C0ZF63.1|RRF_BREBN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|226095980|dbj|BAH44422.1| ribosome recycling factor [Brevibacillus brevis NBRC 100599]
Length = 185
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 58/121 (47%), Positives = 89/121 (73%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D++ RM + I+ ++ + +S+R GR+NPAMLD++ V+YYG+P + +A I+ P+ L I
Sbjct: 8 DMEDRMNKAINALKRDLSSLRAGRANPAMLDRVTVDYYGTPTPISQLANISVPEPRMLTI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QP+DK++LK I++A+ SDLG++P+NDG +IRL +P LT ERRKEL K+ K EE KV
Sbjct: 68 QPWDKTALKEIDRALQQSDLGISPSNDGVIIRLIIPPLTEERRKELVKLAGKGGEEAKVA 127
Query: 219 M 219
+
Sbjct: 128 I 128
>gi|398333426|ref|ZP_10518131.1| ribosome recycling factor [Leptospira alexanderi serovar Manhao 3
str. L 60]
Length = 184
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 58/120 (48%), Positives = 90/120 (75%)
Query: 100 VKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQ 159
+K +M++TID+V+ +F ++RTGR+NP++++ I V+YYG+ + + I+ P+ L+I
Sbjct: 10 MKTKMDKTIDLVKKDFGTIRTGRANPSLVEDIRVDYYGTLTPINQLGNISVPEPRMLVIS 69
Query: 160 PYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
PYDK +K IEKAI +S LG+ P+NDG VIR+ +P+LT ERRKEL+KVV ++EE KV +
Sbjct: 70 PYDKGIMKDIEKAIQASGLGLQPSNDGVVIRIIIPELTGERRKELAKVVKSKSEEKKVAI 129
>gi|399055565|ref|ZP_10743260.1| ribosome recycling factor [Brevibacillus sp. CF112]
gi|433546020|ref|ZP_20502358.1| ribosome recycling factor [Brevibacillus agri BAB-2500]
gi|398046774|gb|EJL39358.1| ribosome recycling factor [Brevibacillus sp. CF112]
gi|432182636|gb|ELK40199.1| ribosome recycling factor [Brevibacillus agri BAB-2500]
Length = 185
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 90/122 (73%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
KD++ RM + I ++ + +S+R GR+NPAMLD++ V+YYG+P + +A I+ P+ L
Sbjct: 7 KDMEDRMNKAILALKKDLSSLRAGRANPAMLDRVMVDYYGTPTPISQLANISVPEPRMLT 66
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
IQP+DK++LK I++A+ SDLG++P+NDG +IRL +P LT ERRKEL K+ +K EE KV
Sbjct: 67 IQPWDKTALKEIDRALQQSDLGISPSNDGVIIRLVIPPLTEERRKELVKLASKGGEEAKV 126
Query: 218 VM 219
+
Sbjct: 127 AI 128
>gi|397905297|ref|ZP_10506160.1| Ribosome recycling factor [Caloramator australicus RC3]
gi|397161656|emb|CCJ33494.1| Ribosome recycling factor [Caloramator australicus RC3]
Length = 184
Score = 132 bits (333), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 60/117 (51%), Positives = 85/117 (72%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M++++++++ S++ GR+NPAMLDKI V+YYG+P + S+A I P+ LLIQP+D
Sbjct: 12 KMKKSLELLKHELQSLKAGRANPAMLDKITVDYYGTPTHISSLATITVPEPRVLLIQPWD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
KS +KSIEKAI SDLG+ P DG V+RL +P+LT E RK L KVV K E+ KV +
Sbjct: 72 KSVVKSIEKAIQKSDLGINPVADGNVVRLVIPELTEETRKNLVKVVKKHGEDAKVAI 128
>gi|297588384|ref|ZP_06947027.1| ribosome recycling factor [Finegoldia magna ATCC 53516]
gi|297573757|gb|EFH92478.1| ribosome recycling factor [Finegoldia magna ATCC 53516]
Length = 185
Score = 132 bits (333), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 62/124 (50%), Positives = 91/124 (73%)
Query: 96 IEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSS 155
I KD++A+ ++T+ +R +VR GR+NP++LD I V+YYG+ LK +A I+ P++
Sbjct: 5 ILKDMEAKADKTLHALREELKTVRAGRANPSILDNIMVDYYGTSTPLKQVATISAPEARL 64
Query: 156 LLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEG 215
L IQP+DKS +K IEK I +S+LG+TP+NDG +IRL PQLT +RRKEL+KVV + E+
Sbjct: 65 LTIQPWDKSIMKEIEKQIQASNLGITPSNDGSIIRLPFPQLTEDRRKELTKVVKEYGEKS 124
Query: 216 KVVM 219
KV +
Sbjct: 125 KVTI 128
>gi|220903796|ref|YP_002479108.1| ribosome recycling factor [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219868095|gb|ACL48430.1| ribosome recycling factor [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 186
Score = 132 bits (333), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 63/126 (50%), Positives = 88/126 (69%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
SI D + RME+ + + +F +RTGR+ A++D I+ +YYG+P + +A I PDS
Sbjct: 4 DSILLDAEDRMEKALAALDRDFAKLRTGRATTALVDGIKADYYGTPTPISQMASIAVPDS 63
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
+L IQP+DK + IEKAI+ SDLG+TP NDG++IR+ +P LT ERRKELSKV K +E
Sbjct: 64 RTLTIQPWDKGGIALIEKAILKSDLGLTPVNDGKLIRIVMPPLTEERRKELSKVARKYSE 123
Query: 214 EGKVVM 219
EGKV +
Sbjct: 124 EGKVAV 129
>gi|403378772|ref|ZP_10920829.1| ribosome recycling factor [Paenibacillus sp. JC66]
Length = 184
Score = 132 bits (333), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 62/125 (49%), Positives = 89/125 (71%)
Query: 95 SIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSS 154
+I+K+ + RME+ I ++ S+R GR+ PA+LD++ VEYYG+ + +A I TPD+
Sbjct: 4 TIKKNAEDRMEKAIAALQKELASLRAGRATPALLDRVLVEYYGTMTPVNQLANITTPDAR 63
Query: 155 SLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEE 214
SL IQP+DKSS+ +IEKAI+ S+LG+TP+NDG IR+ LP LT ERR +L K+ K EE
Sbjct: 64 SLYIQPWDKSSIGAIEKAIMKSELGLTPSNDGSAIRIVLPALTEERRADLVKMTRKYGEE 123
Query: 215 GKVVM 219
KV +
Sbjct: 124 AKVAI 128
>gi|320159761|ref|YP_004172985.1| ribosome recycling factor [Anaerolinea thermophila UNI-1]
gi|319993614|dbj|BAJ62385.1| ribosome recycling factor [Anaerolinea thermophila UNI-1]
Length = 185
Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 60/120 (50%), Positives = 89/120 (74%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K+ + RM+ I + N +RTGR++PA++++++VEYYG P L +A I+ P+ L+
Sbjct: 7 KEAETRMKGAIQALEENLAGIRTGRASPALVERLQVEYYGVPTPLMQLASISAPEPRVLM 66
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
I+P+D SSL+ IEKAI++SDLG+TPNNDG+VIRL +P LT ERR+EL KVV + EE ++
Sbjct: 67 IRPFDTSSLRLIEKAIMASDLGLTPNNDGKVIRLNIPPLTEERRRELVKVVHARLEESRI 126
>gi|294500908|ref|YP_003564608.1| ribosome recycling factor [Bacillus megaterium QM B1551]
gi|295706254|ref|YP_003599329.1| ribosome recycling factor [Bacillus megaterium DSM 319]
gi|384045241|ref|YP_005493258.1| Ribosome recycling factor [Bacillus megaterium WSH-002]
gi|294350845|gb|ADE71174.1| ribosome recycling factor [Bacillus megaterium QM B1551]
gi|294803913|gb|ADF40979.1| ribosome recycling factor [Bacillus megaterium DSM 319]
gi|345442932|gb|AEN87949.1| Ribosome recycling factor [Bacillus megaterium WSH-002]
Length = 185
Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 88/122 (72%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
++ K RME+ I S+R GR++ ++LD++ VEYYG+P + +AQ++ P++ L+
Sbjct: 7 QNAKERMEKAIQSFSRELASIRAGRASASLLDRVTVEYYGAPTPINQLAQVSVPEARMLV 66
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
IQPYDKS + +EKAI+ SDLG+TP +DG +IRL++P LT ERR+EL K+V K AEE KV
Sbjct: 67 IQPYDKSQIGEVEKAILKSDLGLTPTSDGTIIRLSIPALTEERRRELVKMVKKYAEEAKV 126
Query: 218 VM 219
+
Sbjct: 127 AV 128
>gi|119025802|ref|YP_909647.1| ribosome recycling factor [Bifidobacterium adolescentis ATCC 15703]
gi|154487366|ref|ZP_02028773.1| hypothetical protein BIFADO_01216 [Bifidobacterium adolescentis
L2-32]
gi|166230413|sp|A1A1I2.1|RRF_BIFAA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|118765386|dbj|BAF39565.1| ribosome recycling factor [Bifidobacterium adolescentis ATCC 15703]
gi|154083884|gb|EDN82929.1| ribosome recycling factor [Bifidobacterium adolescentis L2-32]
Length = 184
Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 58/126 (46%), Positives = 89/126 (70%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
++I KA+M ++++ + NF+ +RTGR+NPA+L+ I V+YYG+P LK++A I P+
Sbjct: 2 ATIVDQAKAQMAKSVESTKENFSGIRTGRANPALLNGITVDYYGAPTPLKAVATIGVPEP 61
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
+L + P+D S ++EKA+ SDLG +P DG VIRLT+P+LT ERRKE K+ +AE
Sbjct: 62 RTLAVTPFDASQANAVEKALRDSDLGASPRRDGNVIRLTMPELTEERRKEYVKIAKGKAE 121
Query: 214 EGKVVM 219
+GKV +
Sbjct: 122 DGKVAV 127
>gi|224540949|ref|ZP_03681488.1| hypothetical protein CATMIT_00100 [Catenibacterium mitsuokai DSM
15897]
gi|224526100|gb|EEF95205.1| ribosome recycling factor [Catenibacterium mitsuokai DSM 15897]
Length = 181
Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 86/122 (70%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
++ K +ME++++ ++RTGR+NP+MLD++ VEYYGSP L +A I+ + L+
Sbjct: 7 EEAKEKMEKSVEAFSNELVNIRTGRANPSMLDRVMVEYYGSPTPLNQVAGISVVEGRQLV 66
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
I+PYDK+S+K IE I +DLG+TP NDG VIR+ +P LT ERRKE+ K V K AEE KV
Sbjct: 67 IKPYDKNSMKDIEHGIYQADLGLTPQNDGTVIRIVIPPLTEERRKEMVKQVNKLAEEAKV 126
Query: 218 VM 219
+
Sbjct: 127 AL 128
>gi|116872745|ref|YP_849526.1| ribosome recycling factor [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|123458442|sp|A0AIB5.1|RRF_LISW6 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|116741623|emb|CAK20747.1| ribosome recycling factor [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 185
Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 86/119 (72%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K +M++ + ++R GR+N ++LD++ V+YYG+P + +A I+ P++ LLI P
Sbjct: 10 KEKMDKAEQALTRQLGTIRAGRANASLLDRLSVDYYGAPTPVNQMASISVPEARMLLITP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
YDK+ L IEKAI+ SDLG+TPNNDG V+RL++PQLT ERRKEL K V K+AEE KV +
Sbjct: 70 YDKTVLGEIEKAILKSDLGLTPNNDGSVLRLSIPQLTEERRKELVKEVKKEAEEAKVAV 128
>gi|90961538|ref|YP_535454.1| ribosome recycling factor [Lactobacillus salivarius UCC118]
gi|417788084|ref|ZP_12435767.1| ribosome recycling factor [Lactobacillus salivarius NIAS840]
gi|417810473|ref|ZP_12457152.1| ribosome recycling factor [Lactobacillus salivarius GJ-24]
gi|418961172|ref|ZP_13513059.1| ribosome recycling factor [Lactobacillus salivarius SMXD51]
gi|122449175|sp|Q1WUG4.1|RRF_LACS1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|90820732|gb|ABD99371.1| Ribosome Recycling Factor, RRF [Lactobacillus salivarius UCC118]
gi|334308261|gb|EGL99247.1| ribosome recycling factor [Lactobacillus salivarius NIAS840]
gi|335349269|gb|EGM50769.1| ribosome recycling factor [Lactobacillus salivarius GJ-24]
gi|380344839|gb|EIA33185.1| ribosome recycling factor [Lactobacillus salivarius SMXD51]
Length = 187
Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 61/122 (50%), Positives = 88/122 (72%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K+ + +M + D +R ++R GR+N ++L++I VEYYG+P L +AQI+ P++ LL
Sbjct: 9 KEAQEKMTKAEDSLRRELGNIRAGRANASLLNRINVEYYGAPTPLNQMAQISVPEARVLL 68
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
+ PYDK+SLK+IE AI++SDLG+ P NDG IRL +PQLT ERRKEL+K V +E GKV
Sbjct: 69 VTPYDKTSLKNIEHAIMASDLGIAPMNDGTAIRLVIPQLTEERRKELAKQVKAVSETGKV 128
Query: 218 VM 219
+
Sbjct: 129 AV 130
>gi|410456942|ref|ZP_11310789.1| ribosome recycling factor [Bacillus bataviensis LMG 21833]
gi|409926916|gb|EKN64067.1| ribosome recycling factor [Bacillus bataviensis LMG 21833]
Length = 185
Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 61/119 (51%), Positives = 85/119 (71%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K RM + I S+R GR++ ++LD+I V+YYG+P + +A I TP++ ++IQP
Sbjct: 10 KDRMTKAIQSYSRELASIRAGRASASLLDRITVDYYGAPTPVNQMAGITTPEARLIVIQP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
YDKS L IEKAI+ SDLG+ P NDG++IR+ +PQLT ERRKEL KVV K++EE KV +
Sbjct: 70 YDKSILGDIEKAILKSDLGLNPTNDGQIIRIAIPQLTEERRKELVKVVKKESEEAKVAL 128
>gi|372325346|ref|ZP_09519935.1| Ribosome recycling factor [Oenococcus kitaharae DSM 17330]
gi|366984154|gb|EHN59553.1| Ribosome recycling factor [Oenococcus kitaharae DSM 17330]
Length = 180
Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 64/119 (53%), Positives = 84/119 (70%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D+K RM + + ++R GR+NP ML+KI+VEYYG+P L +A I P++ LLI
Sbjct: 6 DLKNRMAKASKAFQNELVNIRAGRANPNMLNKIQVEYYGAPTPLNQLASIQVPEARILLI 65
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
PYDKSSLKSIE+AI +SDLG+TP NDG VIRL +P LT + RK+L K V +AE+ KV
Sbjct: 66 TPYDKSSLKSIEQAIFASDLGLTPQNDGNVIRLMIPILTEDGRKDLVKQVKAEAEKAKV 124
>gi|299823044|ref|ZP_07054930.1| ribosome recycling factor [Listeria grayi DSM 20601]
gi|299816573|gb|EFI83811.1| ribosome recycling factor [Listeria grayi DSM 20601]
Length = 185
Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 88/119 (73%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
KARME+ + ++R GR+N ++LD+I V+YYG+P + IA I+ P++ L+I P
Sbjct: 10 KARMEKAEHSLSKQLGTIRAGRANASLLDRITVDYYGAPTPINQIASISIPEARLLVITP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
+DK+SL+ +EKAI+ SDLG++PNNDG V+RL++PQ T ERR+EL K V K+AEE KV +
Sbjct: 70 FDKNSLEDVEKAILKSDLGLSPNNDGTVLRLSIPQPTEERRRELVKEVKKEAEEAKVAI 128
>gi|296454244|ref|YP_003661387.1| ribosome recycling factor [Bifidobacterium longum subsp. longum
JDM301]
gi|296183675|gb|ADH00557.1| ribosome recycling factor [Bifidobacterium longum subsp. longum
JDM301]
Length = 183
Score = 132 bits (332), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 88/119 (73%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K +M RT++ + NF+ +RTGR+NPA+L+ I V+YYG+P +K++A I P+ +L + P
Sbjct: 8 KEQMARTVENTKENFSGIRTGRANPALLNGITVDYYGAPTPIKAVASIGVPEPRTLSVTP 67
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
+D S ++EKA+ +SDLG++PN DG VIRLT+P+LT +RRKE K+ +AE+GKV +
Sbjct: 68 FDASQAGAVEKALRNSDLGISPNRDGNVIRLTMPELTEDRRKEYVKLAKGKAEDGKVAV 126
>gi|426405632|ref|YP_007024603.1| hypothetical protein Bdt_3662 [Bdellovibrio bacteriovorus str.
Tiberius]
gi|425862300|gb|AFY03336.1| hypothetical protein Bdt_3662 [Bdellovibrio bacteriovorus str.
Tiberius]
Length = 186
Score = 132 bits (332), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 62/126 (49%), Positives = 90/126 (71%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+ ++K+ +A+ME+T++ + VRTGR+ +MLD I V YYG+P L +A I+TPD+
Sbjct: 4 ADVKKNAQAKMEKTLNSLSEELKKVRTGRAQVSMLDNIRVNYYGTPSPLSQVASISTPDA 63
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
S LI P++ + LK IE+AI+ S+LGM P NDG+VIRL +P LT ERRK+L+K V K AE
Sbjct: 64 KSFLIAPWEVAILKDIEQAIIKSELGMAPMNDGKVIRLKVPDLTEERRKDLAKQVKKIAE 123
Query: 214 EGKVVM 219
E +V +
Sbjct: 124 EARVAV 129
>gi|20807853|ref|NP_623024.1| ribosome recycling factor [Thermoanaerobacter tengcongensis MB4]
gi|254479463|ref|ZP_05092790.1| ribosome recycling factor [Carboxydibrachium pacificum DSM 12653]
gi|22001937|sp|Q8RA24.1|RRF_THETN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|20516416|gb|AAM24628.1| Ribosome recycling factor [Thermoanaerobacter tengcongensis MB4]
gi|214034606|gb|EEB75353.1| ribosome recycling factor [Carboxydibrachium pacificum DSM 12653]
Length = 184
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 90/122 (73%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
KD + RM++T++++++ ++R GR+NPA+LD+I V YYG+P L +A I P+ L+
Sbjct: 6 KDSEERMKKTLNVLKSELAAIRAGRANPALLDRITVNYYGTPTPLNRLATITAPEPRVLV 65
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
+QP+D S + IEKAI SDLG+ P +DG+V+RL LP+LT ERRKEL K+V K+AEE ++
Sbjct: 66 VQPWDVSQIGEIEKAIQKSDLGINPVSDGKVLRLVLPELTEERRKELVKLVHKKAEEARI 125
Query: 218 VM 219
+
Sbjct: 126 AV 127
>gi|397669854|ref|YP_006511389.1| ribosome recycling factor [Propionibacterium propionicum F0230a]
gi|395142795|gb|AFN46902.1| ribosome recycling factor [Propionibacterium propionicum F0230a]
Length = 185
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 92/126 (73%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+ +EK+ ++RM++ +D R + +++RTGR++PAM +++ +YYG+P L+ +A N+PD
Sbjct: 3 ADVEKETQSRMQQAVDHAREDLSTIRTGRAHPAMFNRLNADYYGAPTPLQQLATFNSPDP 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
++LI P+D+S++ +IEK I +DLG+ P+NDG IR+ +PQLT ERRKE K+ +AE
Sbjct: 63 RTMLITPFDRSAIAAIEKVIREADLGVNPSNDGNSIRVVMPQLTEERRKEYIKLARAKAE 122
Query: 214 EGKVVM 219
+ ++ +
Sbjct: 123 DARIAV 128
>gi|433459175|ref|ZP_20417018.1| ribosome recycling factor [Arthrobacter crystallopoietes BAB-32]
gi|432191853|gb|ELK48776.1| ribosome recycling factor [Arthrobacter crystallopoietes BAB-32]
Length = 185
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 57/115 (49%), Positives = 84/115 (73%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M++ +++ + +F +VRTGR+NPA+ K+ V+YYG+P L+ +A P++ +LLI PYD
Sbjct: 12 KMDKAVEVAKEDFATVRTGRANPALFSKVTVDYYGTPTPLQQLASFQNPEARTLLITPYD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
K++L IEKA+ SD+G P NDG VIR+ LP+LT ERRKE KVV +AE+ KV
Sbjct: 72 KAALNDIEKALRESDIGANPANDGNVIRVVLPELTEERRKEYVKVVRGKAEDAKV 126
>gi|283798096|ref|ZP_06347249.1| ribosome recycling factor [Clostridium sp. M62/1]
gi|291074241|gb|EFE11605.1| ribosome recycling factor [Clostridium sp. M62/1]
gi|295091732|emb|CBK77839.1| ribosome recycling factor [Clostridium cf. saccharolyticum K10]
Length = 184
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 59/117 (50%), Positives = 87/117 (74%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M+++ D + F+S+R GR+NP +LDK+ V+YYG+P L+ +A I+ P+ + IQP++
Sbjct: 11 KMDKSYDALLNEFSSIRAGRANPHVLDKLRVDYYGAPTPLQQVANISVPEPRMIQIQPWE 70
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
KS +K+IEKAI++SDLG+ P NDG VIRL P+LT ERRKEL+K V K+ E KV +
Sbjct: 71 KSLVKAIEKAILTSDLGINPTNDGSVIRLIFPELTEERRKELAKDVKKKGEGAKVAV 127
>gi|260905212|ref|ZP_05913534.1| ribosome recycling factor [Brevibacterium linens BL2]
Length = 185
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 87/119 (73%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+ + +M++ ++ + +F+S+RTGR+NPA+ IE++YYG+P L+ +A TP++ ++L+
Sbjct: 8 EAREKMDKAVEFTQEDFSSIRTGRANPALFASIEIDYYGAPTPLQQLASFQTPEARTILV 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
PYD+ +L IE A+ +SD+G P NDG VIR+ LP+LT ERRKE K+V +AE+GKV
Sbjct: 68 TPYDRGALGDIETALRNSDIGANPANDGNVIRVVLPELTEERRKEYVKIVKGKAEDGKV 126
>gi|452950238|gb|EME55702.1| ribosome recycling factor [Amycolatopsis decaplanina DSM 44594]
Length = 185
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 85/119 (71%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + +ME+ + + + + +SVRTGR++P M +I VEYYG+P L +A +N P++ LI
Sbjct: 8 DAEEKMEKAVSVAKEDLSSVRTGRAHPGMFSRIVVEYYGAPTPLNQMASVNVPEARMALI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
+PYD++ L +IEKAI SDLG+ P+NDG VIR+ +PQLT ERRKE+ KV + E+ +V
Sbjct: 68 KPYDQTQLNAIEKAIRESDLGVNPSNDGNVIRIVIPQLTEERRKEMVKVAKAKGEDARV 126
>gi|302525191|ref|ZP_07277533.1| ribosome recycling factor [Streptomyces sp. AA4]
gi|302434086|gb|EFL05902.1| ribosome recycling factor [Streptomyces sp. AA4]
Length = 185
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 85/119 (71%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + +ME+ + + + + SVRTGR++P+M +I VEYYG+P L +A +N P++ LI
Sbjct: 8 DAEEKMEKAVSVAKEDLTSVRTGRAHPSMFSRIVVEYYGAPTPLNQLASVNVPEARMALI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
+PYD++ L +IEKAI SDLG+ P+NDG VIR+ +PQLT ERRKE+ KV + E+ +V
Sbjct: 68 KPYDQTQLNAIEKAIRESDLGVNPSNDGNVIRIVIPQLTEERRKEMVKVAKGKGEDARV 126
>gi|449018882|dbj|BAM82284.1| chloroplast ribosome releasing factor RRF [Cyanidioschyzon merolae
strain 10D]
Length = 250
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/180 (42%), Positives = 113/180 (62%), Gaps = 6/180 (3%)
Query: 45 SVSVRQWSSAAN----YSRLVKLSNKPIVVRQLAHKR-NGVVRCATIEEIEAEKSSIEKD 99
SV V Q SS A+ RL+ + +R+ R + +R +E ++ K I+ D
Sbjct: 15 SVRVAQASSPASGRWERPRLLGKGAPLVPLRRRPQARVHAALRLRCVEGTDSLKG-IQVD 73
Query: 100 VKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQ 159
+ +ME+TI +R N ++RT R++PA+L++I+V+YYG L +A I+TP S++L I+
Sbjct: 74 CEQKMEKTIVSLRNNLAAIRTSRASPALLNRIQVKYYGVDTPLLQLASISTPSSTALQIE 133
Query: 160 PYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
PYDKS L IE+ I SDLG+TP+NDG VIRL +P LT ERRK+L K + AEE +V +
Sbjct: 134 PYDKSCLGDIERTIAESDLGLTPSNDGNVIRLNVPPLTEERRKQLVKAAKEMAEESRVAL 193
>gi|443632677|ref|ZP_21116856.1| ribosome recycling factor [Bacillus subtilis subsp. inaquosorum
KCTC 13429]
gi|443347500|gb|ELS61558.1| ribosome recycling factor [Bacillus subtilis subsp. inaquosorum
KCTC 13429]
Length = 185
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 85/119 (71%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K +ME+ I + +VR GR+NP++LDK+ VEYYG+ L ++ IN P++ L++ P
Sbjct: 10 KEKMEKAIAAYQRELATVRAGRANPSLLDKVTVEYYGAQTPLNQLSSINVPEARMLVVTP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
YDKS++ IEKAI+ +DLG+TP +DG +IR+ +P LT ERRKEL KVV K AEE KV +
Sbjct: 70 YDKSAIGDIEKAILKADLGLTPTSDGNMIRIAIPALTEERRKELVKVVKKYAEEAKVAV 128
>gi|42525110|ref|NP_970490.1| hypothetical protein Bd3784 [Bdellovibrio bacteriovorus HD100]
gi|47116990|sp|P61302.1|RRF_BDEBA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|39577321|emb|CAE81144.1| rrf [Bdellovibrio bacteriovorus HD100]
Length = 186
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/126 (49%), Positives = 90/126 (71%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+ ++K+ +A+ME+T++ + VRTGR+ +MLD I V YYG+P L +A I+TPD+
Sbjct: 4 ADVKKNAQAKMEKTLNSLSEELKKVRTGRAQVSMLDGIRVNYYGTPSPLSQVASISTPDA 63
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
S LI P++ + LK IE+AI+ S+LGM P NDG+VIRL +P LT ERRK+L+K V K AE
Sbjct: 64 KSFLIAPWEVAILKDIEQAIIKSELGMAPMNDGKVIRLKVPDLTEERRKDLAKQVKKIAE 123
Query: 214 EGKVVM 219
E +V +
Sbjct: 124 EARVAV 129
>gi|374296772|ref|YP_005046963.1| ribosome recycling factor [Clostridium clariflavum DSM 19732]
gi|359826266|gb|AEV69039.1| ribosome recycling factor [Clostridium clariflavum DSM 19732]
Length = 185
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 87/122 (71%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K ++ +M++TI ++R VR GR+NPA+LDKI V+YYG P + +A I+ P++ ++
Sbjct: 7 KAIEEKMQKTIKVLRDELAGVRAGRANPAILDKITVDYYGVPTPINQLASISVPEARVIM 66
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
IQP++ S +K IEK I SD+G+ PN+DG+VIRL P LT ERRKEL+KVV K E+ KV
Sbjct: 67 IQPWEASMVKEIEKEIQKSDIGINPNSDGKVIRLVFPMLTEERRKELTKVVKKYGEDSKV 126
Query: 218 VM 219
+
Sbjct: 127 AI 128
>gi|51892632|ref|YP_075323.1| ribosome recycling factor [Symbiobacterium thermophilum IAM 14863]
gi|60390686|sp|Q67PB4.1|RRF_SYMTH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|51856321|dbj|BAD40479.1| ribosome recycling factor [Symbiobacterium thermophilum IAM 14863]
Length = 185
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 90/122 (73%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
KD + RM++ +++ R +R R+ PA+LDK+ VE YGS V + ++A I PD +L+
Sbjct: 7 KDAEERMKKAVEVFRQELAGMRANRATPALLDKVRVEAYGSEVPVNNVATIEVPDPRTLV 66
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
I+P+D+S +K+IE+AI +SDLG+ P NDG+VIRL++P +T ERR+EL KVVAK+ EE +V
Sbjct: 67 IKPWDRSLIKAIERAINASDLGLNPTNDGQVIRLSIPPMTEERRRELVKVVAKRTEEQRV 126
Query: 218 VM 219
+
Sbjct: 127 AI 128
>gi|323142320|ref|ZP_08077152.1| ribosome recycling factor [Phascolarctobacterium succinatutens YIT
12067]
gi|322413204|gb|EFY04091.1| ribosome recycling factor [Phascolarctobacterium succinatutens YIT
12067]
Length = 187
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 59/120 (49%), Positives = 91/120 (75%)
Query: 100 VKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQ 159
++++ME+++ +R + S+R GR+ P++L+K+ V+YYGSP + +A + P+ ++IQ
Sbjct: 11 IESKMEKSVAALRVDLASLRAGRATPSLLEKVMVDYYGSPTPVTQVASVTVPEPRMIVIQ 70
Query: 160 PYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
P++K+ LK IEKAI+ SDLG+ PN+DG IRL LPQLT ERRK+L KVV K+AEE +VV+
Sbjct: 71 PWEKNILKDIEKAIMKSDLGLNPNSDGICIRLNLPQLTEERRKDLVKVVHKKAEEYRVVV 130
>gi|386758376|ref|YP_006231592.1| ribosome recycling factor [Bacillus sp. JS]
gi|384931658|gb|AFI28336.1| ribosome recycling factor [Bacillus sp. JS]
Length = 185
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 85/119 (71%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K +ME+ I + +VR GR+NP++LDK+ VEYYG+ L ++ IN P++ L+I P
Sbjct: 10 KEKMEKAIAAYQRELATVRAGRANPSLLDKVSVEYYGAQTPLNQLSSINVPEARMLVITP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
YDK+++ IEKAI+ +DLG+TP +DG +IR+ +P LT ERRKEL KVV K AEE KV +
Sbjct: 70 YDKTAIGDIEKAILKADLGLTPTSDGNMIRIAIPALTEERRKELVKVVKKYAEEAKVAV 128
>gi|239826646|ref|YP_002949270.1| ribosome recycling factor [Geobacillus sp. WCH70]
gi|259494544|sp|C5D9B8.1|RRF_GEOSW RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|239806939|gb|ACS24004.1| ribosome recycling factor [Geobacillus sp. WCH70]
Length = 185
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 59/119 (49%), Positives = 88/119 (73%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K +M++ + ++R GR+NP++L+K+ V+YYG P + +A I+ P++ L+IQP
Sbjct: 10 KEKMDKAVQAFTRELATIRAGRANPSLLEKVTVDYYGMPTPIIQLASISVPEARLLVIQP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
YDKS +K IEKAI+SSDLG+TP+NDG VIR+T+P LT ERR+EL K+V K +E+ KV +
Sbjct: 70 YDKSVIKDIEKAILSSDLGLTPSNDGSVIRITIPPLTEERRRELVKLVKKYSEDAKVAV 128
>gi|289450226|ref|YP_003475249.1| ribosome recycling factor [Clostridiales genomosp. BVAB3 str.
UPII9-5]
gi|289184773|gb|ADC91198.1| ribosome recycling factor [Clostridiales genomosp. BVAB3 str.
UPII9-5]
Length = 187
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/117 (51%), Positives = 83/117 (70%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
RM ++ID ++ N NSVR GR+NP +LD+I + YYG+ L +A I P+ + I P+D
Sbjct: 14 RMNKSIDNLKENLNSVRAGRANPHILDRITISYYGAETPLNQVANIQVPEPRMITISPWD 73
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
SSL IEKA++ SD+G+ PNNDG++IRL P LT ERRK+L+K VAK EE K+V+
Sbjct: 74 PSSLSLIEKAVLMSDIGINPNNDGKMIRLVFPTLTEERRKDLAKTVAKYGEETKIVV 130
>gi|220927898|ref|YP_002504807.1| ribosome recycling factor [Clostridium cellulolyticum H10]
gi|219998226|gb|ACL74827.1| ribosome recycling factor [Clostridium cellulolyticum H10]
Length = 185
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 89/122 (72%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K ++ +M++TI+++R N +R GR+NPA+LDK+ ++YYG+P ++ +A ++ P++ +L
Sbjct: 7 KPIEEKMKKTINVLRDNLAGIRAGRANPAILDKLTIDYYGAPTPIQQVATVSIPEARVIL 66
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
IQP++ LK IEK I SD+G+ PNNDG+V+RL P LT ERR+EL+K K+ EE K+
Sbjct: 67 IQPWEAKLLKDIEKEIQKSDIGINPNNDGKVLRLVFPALTEERRRELTKQAKKEGEESKI 126
Query: 218 VM 219
+
Sbjct: 127 AI 128
>gi|227824516|ref|ZP_03989348.1| ribosome recycling factor [Acidaminococcus sp. D21]
gi|352684981|ref|YP_004896966.1| ribosome recycling factor [Acidaminococcus intestini RyC-MR95]
gi|226905015|gb|EEH90933.1| ribosome recycling factor [Acidaminococcus sp. D21]
gi|350279636|gb|AEQ22826.1| ribosome recycling factor [Acidaminococcus intestini RyC-MR95]
Length = 187
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/137 (45%), Positives = 95/137 (69%), Gaps = 7/137 (5%)
Query: 83 CATIEEIEAEKSSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSL 142
ATIEE++A D + +M + + T ++RTGR+ P++LD+++V+YYG+ +
Sbjct: 1 MATIEELKA-------DSERKMTSALKALHTELAAIRTGRATPSLLDQVKVDYYGTATPV 53
Query: 143 KSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRK 202
+A ++ P+ ++IQP+DKS +K IEKAI++SDLG+ PNNDG VIRL+LP LT ERRK
Sbjct: 54 NQLANVSVPEPRMIVIQPWDKSLMKEIEKAIMTSDLGLNPNNDGTVIRLSLPILTEERRK 113
Query: 203 ELSKVVAKQAEEGKVVM 219
EL KVV K+ E +V +
Sbjct: 114 ELVKVVHKKGESARVAV 130
>gi|225181371|ref|ZP_03734815.1| ribosome recycling factor [Dethiobacter alkaliphilus AHT 1]
gi|225167952|gb|EEG76759.1| ribosome recycling factor [Dethiobacter alkaliphilus AHT 1]
Length = 185
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 58/123 (47%), Positives = 92/123 (74%)
Query: 95 SIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSS 154
S+ D + RME+ + ++ + ++R GR+ P++LDKI V+YYGS + + +A ++TP+
Sbjct: 4 SVYSDAQERMEKAVSALKRDLATLRAGRATPSLLDKIVVDYYGSSMPINQLANVSTPEPR 63
Query: 155 SLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEE 214
L+IQP+DK+++ +E+AI+ SDLG+TP +DG +IRL +PQLT ERRKEL KV K+AE+
Sbjct: 64 LLVIQPWDKNAVAEVERAILKSDLGLTPVSDGSIIRLAIPQLTEERRKELVKVSKKKAED 123
Query: 215 GKV 217
G+V
Sbjct: 124 GRV 126
>gi|295114850|emb|CBL35697.1| ribosome recycling factor [butyrate-producing bacterium SM4/1]
Length = 181
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 88/117 (75%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M+++ D + F+S+R GR+NP +LDK+ V+YYG+P L+ +A I+ P+ + IQP++
Sbjct: 11 KMDKSYDALLNEFSSIRAGRANPHVLDKLRVDYYGAPTPLQQVANISVPEPRMIQIQPWE 70
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
KS +K+IEKAI++SDLG+ P+NDG VIRL P+LT ERRKEL+K + K+ E KV +
Sbjct: 71 KSLVKAIEKAILTSDLGINPSNDGSVIRLIFPELTEERRKELAKDIKKKGEGAKVAV 127
>gi|294102175|ref|YP_003554033.1| ribosome recycling factor [Aminobacterium colombiense DSM 12261]
gi|293617155|gb|ADE57309.1| ribosome recycling factor [Aminobacterium colombiense DSM 12261]
Length = 186
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/117 (51%), Positives = 88/117 (75%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+ME+ I+ ++ F S+RTGR++P +++ I V+YYGS +K +A ++ P++ +LI P+D
Sbjct: 12 KMEKVIEHLKEEFISIRTGRAHPGLVNDIRVDYYGSQTPIKQLATVSVPEARQILIAPFD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
+S LK IEKAI +S LG+ P NDGE IRLTLP+LT ERR ELSKVV+K AEE ++ +
Sbjct: 72 RSILKGIEKAIQASSLGINPQNDGENIRLTLPELTKERRIELSKVVSKYAEEARIAV 128
>gi|425735399|ref|ZP_18853713.1| ribosome recycling factor [Brevibacterium casei S18]
gi|425479805|gb|EKU46977.1| ribosome recycling factor [Brevibacterium casei S18]
Length = 185
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 86/119 (72%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+ + +M++ ++ + +F S+RTGR+NPA+ IE++YYG+P L+ +A TP++ ++L+
Sbjct: 8 EAREKMDKAVEFTQEDFASIRTGRANPALFANIEIDYYGAPTPLQQLASFQTPEARTILV 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
PYD+ +L IE A+ +SD+G P NDG VIR+ LP+LT ERRKE K+V +AE+GKV
Sbjct: 68 TPYDRGTLGDIENALRNSDIGANPANDGNVIRVVLPELTEERRKEYVKIVKGKAEDGKV 126
>gi|415726961|ref|ZP_11471189.1| ribosome recycling factor [Gardnerella vaginalis 00703Dmash]
gi|388062690|gb|EIK85295.1| ribosome recycling factor [Gardnerella vaginalis 00703Dmash]
Length = 184
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 59/126 (46%), Positives = 89/126 (70%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
S+I K +M ++++ + NF +RTGR+NPA+L+ I V+YYG+P +K++A I P+
Sbjct: 2 SAIIDQAKEQMNKSVEATKENFMGIRTGRANPALLNGIMVDYYGAPTPIKAVASIGVPEP 61
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
+L + P+D S ++EKAI SDLG++PN DG VIR+T+P+LT ERRKE K+ +AE
Sbjct: 62 RTLSVTPFDASQANAVEKAIRDSDLGVSPNRDGNVIRVTMPELTEERRKEYVKLAKNKAE 121
Query: 214 EGKVVM 219
EGKV +
Sbjct: 122 EGKVAV 127
>gi|312111646|ref|YP_003989962.1| ribosome recycling factor [Geobacillus sp. Y4.1MC1]
gi|336236021|ref|YP_004588637.1| ribosome recycling factor [Geobacillus thermoglucosidasius
C56-YS93]
gi|423720565|ref|ZP_17694747.1| ribosome recycling factor [Geobacillus thermoglucosidans
TNO-09.020]
gi|311216747|gb|ADP75351.1| ribosome recycling factor [Geobacillus sp. Y4.1MC1]
gi|335362876|gb|AEH48556.1| ribosome recycling factor [Geobacillus thermoglucosidasius
C56-YS93]
gi|383365918|gb|EID43209.1| ribosome recycling factor [Geobacillus thermoglucosidans
TNO-09.020]
Length = 185
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 59/119 (49%), Positives = 88/119 (73%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K +M++ + ++R GR+NP++L+KI V+YYG+P + +A I+ P++ L+IQP
Sbjct: 10 KEKMDKAVQAFTRELATIRAGRANPSLLEKITVDYYGAPTPIIQLASISAPEARLLVIQP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
YDKS +K IEKAI+SSDLG+TP+NDG VIR+ +P LT ERR+EL K+V K +E+ KV +
Sbjct: 70 YDKSVIKDIEKAILSSDLGLTPSNDGSVIRIAIPPLTEERRRELVKLVKKYSEDAKVAV 128
>gi|452974444|gb|EME74264.1| ribosome recycling factor [Bacillus sonorensis L12]
Length = 185
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 85/119 (71%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K RME+ + + +VR GR+NP++LDK+ VEYYG+ L +A I P++ L+I P
Sbjct: 10 KERMEKAVAAYQRELATVRAGRANPSLLDKVTVEYYGAQTPLNQLASITVPEARMLVITP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
YDK++L IEKAI +DLG+TP NDG +IR+T+P LT ERRKEL+K+V K +E+ KV +
Sbjct: 70 YDKTALGDIEKAIQKADLGVTPTNDGSIIRITIPPLTEERRKELAKLVKKYSEDAKVAV 128
>gi|16078715|ref|NP_389534.1| ribosome recycling factor [Bacillus subtilis subsp. subtilis str.
168]
gi|221309530|ref|ZP_03591377.1| ribosome recycling factor [Bacillus subtilis subsp. subtilis str.
168]
gi|221313854|ref|ZP_03595659.1| ribosome recycling factor [Bacillus subtilis subsp. subtilis str.
NCIB 3610]
gi|221318777|ref|ZP_03600071.1| ribosome recycling factor [Bacillus subtilis subsp. subtilis str.
JH642]
gi|221323049|ref|ZP_03604343.1| ribosome recycling factor [Bacillus subtilis subsp. subtilis str.
SMY]
gi|321315419|ref|YP_004207706.1| ribosome recycling factor [Bacillus subtilis BSn5]
gi|402775898|ref|YP_006629842.1| ribosome recycling factor [Bacillus subtilis QB928]
gi|418033199|ref|ZP_12671676.1| ribosome recycling factor [Bacillus subtilis subsp. subtilis str.
SC-8]
gi|428279250|ref|YP_005560985.1| ribosome recycling factor [Bacillus subtilis subsp. natto BEST195]
gi|430758924|ref|YP_007209645.1| Ribosome recycling factor [Bacillus subtilis subsp. subtilis str.
BSP1]
gi|449094343|ref|YP_007426834.1| ribosome recycling factor [Bacillus subtilis XF-1]
gi|452914427|ref|ZP_21963054.1| ribosome recycling factor [Bacillus subtilis MB73/2]
gi|3122762|sp|P81101.2|RRF_BACSU RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor; AltName: Full=Vegetative
protein 12B; Short=VEG12B
gi|2634024|emb|CAB13525.1| ribosome recycling factor [Bacillus subtilis subsp. subtilis str.
168]
gi|291484207|dbj|BAI85282.1| ribosome recycling factor [Bacillus subtilis subsp. natto BEST195]
gi|320021693|gb|ADV96679.1| ribosome recycling factor [Bacillus subtilis BSn5]
gi|351469347|gb|EHA29523.1| ribosome recycling factor [Bacillus subtilis subsp. subtilis str.
SC-8]
gi|402481080|gb|AFQ57589.1| Ribosome recycling factor [Bacillus subtilis QB928]
gi|407959059|dbj|BAM52299.1| ribosome recycling factor [Synechocystis sp. PCC 6803]
gi|407964636|dbj|BAM57875.1| ribosome recycling factor [Bacillus subtilis BEST7003]
gi|430023444|gb|AGA24050.1| Ribosome recycling factor [Bacillus subtilis subsp. subtilis str.
BSP1]
gi|449028258|gb|AGE63497.1| ribosome recycling factor [Bacillus subtilis XF-1]
gi|452116847|gb|EME07242.1| ribosome recycling factor [Bacillus subtilis MB73/2]
Length = 185
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 85/119 (71%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K +ME+ I + +VR GR+NP++LDK+ VEYYG+ L ++ IN P++ L+I P
Sbjct: 10 KEKMEKAIAAYQRELATVRAGRANPSLLDKVTVEYYGAQTPLNQLSSINVPEARMLVITP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
YDK+++ IEKAI+ +DLG+TP +DG +IR+ +P LT ERRKEL KVV K AEE KV +
Sbjct: 70 YDKTAIGDIEKAILKADLGLTPTSDGNMIRIAIPALTEERRKELVKVVKKYAEEAKVAV 128
>gi|358063656|ref|ZP_09150263.1| ribosome-recycling factor [Clostridium hathewayi WAL-18680]
gi|356698153|gb|EHI59706.1| ribosome-recycling factor [Clostridium hathewayi WAL-18680]
Length = 184
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 85/117 (72%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M +++D +++ + S+R GR+NP +LDKI+V+YYG+P L+ + + P++ + IQP++
Sbjct: 11 KMNKSLDALQSEYVSIRAGRANPHVLDKIKVDYYGTPTPLQQVGNVTVPEARMIQIQPWE 70
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
KS L+ IEKAI SDLG+ P NDG VIRL P+LT ERRKEL+K V K+ E KV M
Sbjct: 71 KSLLREIEKAIQMSDLGINPTNDGNVIRLVFPELTEERRKELAKDVKKKGEAAKVAM 127
>gi|300783895|ref|YP_003764186.1| ribosome recycling factor [Amycolatopsis mediterranei U32]
gi|399535780|ref|YP_006548442.1| ribosome recycling factor [Amycolatopsis mediterranei S699]
gi|299793409|gb|ADJ43784.1| ribosome recycling factor [Amycolatopsis mediterranei U32]
gi|398316550|gb|AFO75497.1| ribosome recycling factor [Amycolatopsis mediterranei S699]
Length = 187
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 59/119 (49%), Positives = 84/119 (70%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + +ME+ + + + SVRTGR++ AM +I VEYYGSP L +A +N P++ LI
Sbjct: 10 DAEEKMEKAVSVAKDELQSVRTGRASSAMFSRIVVEYYGSPTPLNQLASVNVPEARMALI 69
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
+PYD+S L +IEKAI SDLG+ P+NDG+VIR+ +PQLT ERRKE+ KV + E+ +V
Sbjct: 70 KPYDQSQLNAIEKAIRESDLGVNPSNDGQVIRIVIPQLTEERRKEMVKVAKGKGEDARV 128
>gi|381397796|ref|ZP_09923205.1| Ribosome-recycling factor [Microbacterium laevaniformans OR221]
gi|380774924|gb|EIC08219.1| Ribosome-recycling factor [Microbacterium laevaniformans OR221]
Length = 184
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 59/125 (47%), Positives = 91/125 (72%), Gaps = 1/125 (0%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+ I D ARM+R ++ + +F +VRTGR+NP + KI V+YYGSP L +A +NTP++
Sbjct: 3 AEILADTSARMDRAVEAAKDDFATVRTGRANPQLFQKILVDYYGSPTPLAQLASLNTPEA 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVS-SDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQA 212
+L++ PYDKS+LK+IE+AI +LG P+NDG ++R+++P+LT+ERRKE K+V +
Sbjct: 63 RTLVVTPYDKSALKAIEQAIRDMPNLGANPSNDGNIVRVSMPELTAERRKEYVKLVRTKG 122
Query: 213 EEGKV 217
E+ KV
Sbjct: 123 EDAKV 127
>gi|384147136|ref|YP_005529952.1| ribosome recycling factor [Amycolatopsis mediterranei S699]
gi|340525290|gb|AEK40495.1| ribosome recycling factor [Amycolatopsis mediterranei S699]
Length = 185
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 59/119 (49%), Positives = 84/119 (70%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + +ME+ + + + SVRTGR++ AM +I VEYYGSP L +A +N P++ LI
Sbjct: 8 DAEEKMEKAVSVAKDELQSVRTGRASSAMFSRIVVEYYGSPTPLNQLASVNVPEARMALI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
+PYD+S L +IEKAI SDLG+ P+NDG+VIR+ +PQLT ERRKE+ KV + E+ +V
Sbjct: 68 KPYDQSQLNAIEKAIRESDLGVNPSNDGQVIRIVIPQLTEERRKEMVKVAKGKGEDARV 126
>gi|398337499|ref|ZP_10522204.1| ribosome recycling factor [Leptospira kmetyi serovar Malaysia str.
Bejo-Iso9]
Length = 184
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 59/120 (49%), Positives = 89/120 (74%)
Query: 100 VKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQ 159
+K +M++TID+V+ +F +VRTGR+NP++++ I V+YYG+ + + I+ P+ L+I
Sbjct: 10 MKTKMDKTIDLVKKDFGTVRTGRANPSLVEDIRVDYYGTLTPINQLGNISVPEPRILVIS 69
Query: 160 PYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
PYDK +K IEKAI S LG+ P+NDG VIR+ +P+LT ERRKEL+KVV ++EE KV +
Sbjct: 70 PYDKGIMKDIEKAIQVSGLGLQPSNDGVVIRIIIPELTGERRKELAKVVKSKSEEKKVAI 129
>gi|256371432|ref|YP_003109256.1| ribosome recycling factor [Acidimicrobium ferrooxidans DSM 10331]
gi|256008016|gb|ACU53583.1| ribosome recycling factor [Acidimicrobium ferrooxidans DSM 10331]
Length = 190
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/132 (48%), Positives = 90/132 (68%), Gaps = 4/132 (3%)
Query: 88 EIEAEKSSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQ 147
+I+AE ++ E RM + + F +VRTGR+ A+LD I VEYYG V L+ +A
Sbjct: 6 DIDAELAAFED----RMAKAVRHTEEEFATVRTGRAQAALLDGIVVEYYGERVPLRQLAS 61
Query: 148 INTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKV 207
+ TPD SLLI PYD++++ ++E+AI SDLG+ P NDG VIR+ + LT ERR+EL KV
Sbjct: 62 VTTPDPHSLLIAPYDRNAMGAMERAIRDSDLGVNPTNDGSVIRIAIAPLTEERRRELVKV 121
Query: 208 VAKQAEEGKVVM 219
V K+AEEG+V +
Sbjct: 122 VRKRAEEGRVAI 133
>gi|417931337|ref|ZP_12574705.1| ribosome recycling factor [Propionibacterium acnes SK182B-JCVI]
gi|340776076|gb|EGR98126.1| ribosome recycling factor [Propionibacterium acnes SK182B-JCVI]
Length = 184
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 59/126 (46%), Positives = 85/126 (67%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
S I KD + +M +D R F ++RTGR+NPAM +K+ VEYYG+P L+ +A P++
Sbjct: 2 SDIIKDAEKKMGSAVDHAREEFAAIRTGRANPAMFNKLMVEYYGTPTPLQQLASFQVPEA 61
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
++LI P+DKS + +EK I SDLG+ P+NDG V+R LP LT ERRKE K+ +AE
Sbjct: 62 RTVLIAPFDKSCVNDVEKTIRDSDLGVNPSNDGNVVRCVLPALTEERRKEYIKMAKTKAE 121
Query: 214 EGKVVM 219
EG++ +
Sbjct: 122 EGRIAV 127
>gi|225352148|ref|ZP_03743171.1| hypothetical protein BIFPSEUDO_03763 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
gi|225157395|gb|EEG70734.1| hypothetical protein BIFPSEUDO_03763 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
Length = 184
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 58/126 (46%), Positives = 90/126 (71%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
++I + KA+M ++++ + NF+ +RTGR+NPA+L+ I V+YYG+P LK++A I P+
Sbjct: 2 ATIVEQAKAQMAKSVESTKENFSGIRTGRANPALLNGITVDYYGAPTPLKAVATIGVPEP 61
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
+L + P+D S ++EKA+ SDLG +P DG VIRLT+P+LT ERRKE K+ +AE
Sbjct: 62 RTLSVTPFDASQANAVEKALRDSDLGASPRRDGNVIRLTMPELTEERRKEYVKLAKGKAE 121
Query: 214 EGKVVM 219
+GKV +
Sbjct: 122 DGKVAV 127
>gi|308173615|ref|YP_003920320.1| ribosome recycling factor [Bacillus amyloliquefaciens DSM 7]
gi|384164201|ref|YP_005545580.1| ribosome recycling factor [Bacillus amyloliquefaciens LL3]
gi|307606479|emb|CBI42850.1| ribosome recycling factor [Bacillus amyloliquefaciens DSM 7]
gi|328911756|gb|AEB63352.1| ribosome recycling factor [Bacillus amyloliquefaciens LL3]
Length = 185
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 84/119 (70%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K RME+ + SVR GR+NP++LDK+ VEYYG+ L ++ IN P++ L++ P
Sbjct: 10 KERMEKAVAAYSRELASVRAGRANPSLLDKVTVEYYGAQTPLNQLSSINVPEARMLVVTP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
YDK+++ IEKAI+ +DLG+TP +DG +IR+ +P LT ERRKEL KVV K AEE KV +
Sbjct: 70 YDKTAIGDIEKAILKADLGVTPTSDGTIIRIAIPALTEERRKELVKVVKKYAEEAKVAV 128
>gi|415717349|ref|ZP_11466800.1| ribosome recycling factor [Gardnerella vaginalis 1500E]
gi|415729418|ref|ZP_11472444.1| ribosome recycling factor [Gardnerella vaginalis 6119V5]
gi|388060949|gb|EIK83619.1| ribosome recycling factor [Gardnerella vaginalis 1500E]
gi|388064452|gb|EIK86986.1| ribosome recycling factor [Gardnerella vaginalis 6119V5]
Length = 184
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 59/126 (46%), Positives = 89/126 (70%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
S+I K +M ++++ + NF +RTGR+NPA+L+ I V+YYG+P +K++A I P+
Sbjct: 2 SAIIDQAKEQMNKSVEATKENFMGIRTGRANPALLNGIMVDYYGAPTPIKAVASIGVPEP 61
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
+L + P+D S ++EKAI SDLG++PN DG VIR+T+P+LT ERRKE K+ +AE
Sbjct: 62 RTLSVTPFDASQANAVEKAIRDSDLGVSPNRDGNVIRVTMPELTEERRKEYVKLAKNKAE 121
Query: 214 EGKVVM 219
EGKV +
Sbjct: 122 EGKVAV 127
>gi|302670318|ref|YP_003830278.1| ribosome recycling factor Frr [Butyrivibrio proteoclasticus B316]
gi|302394791|gb|ADL33696.1| ribosome recycling factor Frr [Butyrivibrio proteoclasticus B316]
Length = 183
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 88/117 (75%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M+++ D +R + S+R GR+NP +LDKI+V+YYG+P L+ + ++ P++ + I P+D
Sbjct: 11 KMQKSFDYLREDLASIRAGRANPHVLDKIKVDYYGTPTPLQQVGNVSVPEARIIQIAPWD 70
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
K+ +K IEKAI+ SDLG+TP+NDG VIRL P+LT ERRK+L+K + K+ E+ KV +
Sbjct: 71 KTLIKDIEKAIMMSDLGITPSNDGTVIRLVFPELTEERRKQLTKDIRKKGEDAKVAV 127
>gi|282850149|ref|ZP_06259528.1| ribosome recycling factor [Veillonella parvula ATCC 17745]
gi|294791801|ref|ZP_06756949.1| ribosome recycling factor [Veillonella sp. 6_1_27]
gi|416998745|ref|ZP_11939414.1| ribosome recycling factor [Veillonella parvula ACS-068-V-Sch12]
gi|282579642|gb|EFB85046.1| ribosome recycling factor [Veillonella parvula ATCC 17745]
gi|294457031|gb|EFG25393.1| ribosome recycling factor [Veillonella sp. 6_1_27]
gi|333976898|gb|EGL77757.1| ribosome recycling factor [Veillonella parvula ACS-068-V-Sch12]
Length = 186
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 59/117 (50%), Positives = 88/117 (75%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
RM ++I+ ++ F S+RTGR++ A+LDK+ V+YYGSP + +A I+ P+ ++I P+D
Sbjct: 13 RMNKSIEALKHEFASIRTGRASVALLDKVMVDYYGSPSPINQVANISVPEPRMIVIAPWD 72
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
K+ + +IEKAI+ SDLG+ P NDG IRL++PQLT ERRKE+ KVV K+AE+ KV +
Sbjct: 73 KTMIGAIEKAILQSDLGLNPGNDGAQIRLSIPQLTEERRKEIVKVVHKKAEDAKVAV 129
>gi|78045140|ref|YP_360604.1| ribosome recycling factor [Carboxydothermus hydrogenoformans
Z-2901]
gi|123575922|sp|Q3AB80.1|RRF_CARHZ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|77997255|gb|ABB16154.1| ribosome recycling factor [Carboxydothermus hydrogenoformans
Z-2901]
Length = 185
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/126 (47%), Positives = 91/126 (72%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
I K+ + M++ I++++ F ++R GR+ PA+L+K+ VEYYG+ + + +A I+ P+
Sbjct: 3 QDILKEAQDHMQKAIEVLKKEFATMRVGRATPALLEKVVVEYYGTQMPVNQLATISAPEP 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
L+IQP+DK +L +IEKAI+ SDLG+TP NDG VIRL +P LT ERR+EL KV K+AE
Sbjct: 63 RLLVIQPWDKGALGAIEKAILKSDLGITPTNDGSVIRLAIPPLTQERRQELVKVARKKAE 122
Query: 214 EGKVVM 219
E +V +
Sbjct: 123 EARVAI 128
>gi|299144039|ref|ZP_07037119.1| ribosome recycling factor [Peptoniphilus sp. oral taxon 386 str.
F0131]
gi|298518524|gb|EFI42263.1| ribosome recycling factor [Peptoniphilus sp. oral taxon 386 str.
F0131]
Length = 185
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/124 (48%), Positives = 89/124 (71%)
Query: 96 IEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSS 155
I+KD + +M++TI + R + S+R GR+NP++LDKI V+YYG L +A I+ P+
Sbjct: 5 IKKDAEEKMKKTISVYREDLQSIRAGRANPSLLDKITVDYYGQATPLNQVAGISAPEPRL 64
Query: 156 LLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEG 215
L I P+D S + +IEKAI+ S+LG+TP+NDG+++RL +P LT ERRKEL+K+V K E
Sbjct: 65 LAITPWDASLIPAIEKAILKSELGITPSNDGKIVRLLIPHLTEERRKELTKIVRKNGENA 124
Query: 216 KVVM 219
KV +
Sbjct: 125 KVAI 128
>gi|308233714|ref|ZP_07664451.1| ribosome recycling factor [Atopobium vaginae DSM 15829]
gi|328944064|ref|ZP_08241529.1| ribosome recycling factor [Atopobium vaginae DSM 15829]
gi|327492033|gb|EGF23807.1| ribosome recycling factor [Atopobium vaginae DSM 15829]
Length = 181
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/116 (53%), Positives = 84/116 (72%)
Query: 104 MERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDK 163
M + ID ++ NF+ VRTGR+NP +LD I V+YYG P + +A I P+ S L+++P+DK
Sbjct: 12 MNKCIDALKNNFSKVRTGRANPQVLDGIRVDYYGQPTPIVQLAGIKVPEPSMLVVEPWDK 71
Query: 164 SSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
SSLK+IEKAI SSDLG+TP+NDG IRL P+ T ERR+EL K + AE+ KV +
Sbjct: 72 SSLKAIEKAIESSDLGITPSNDGTSIRLPFPKPTEERRRELVKECKQYAEDAKVAV 127
>gi|212715798|ref|ZP_03323926.1| hypothetical protein BIFCAT_00699 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
gi|212661165|gb|EEB21740.1| hypothetical protein BIFCAT_00699 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
Length = 184
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 58/126 (46%), Positives = 90/126 (71%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
++I + KA+M ++++ + NF+ +RTGR+NPA+L+ I V+YYG+P LK++A I P+
Sbjct: 2 ATIVEQAKAQMAKSVESTKENFSGIRTGRANPALLNGITVDYYGAPTPLKAVATIGVPEP 61
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
+L + P+D S ++EKA+ SDLG +P DG VIRLT+P+LT ERRKE K+ +AE
Sbjct: 62 RTLSVTPFDASQANAVEKALRDSDLGASPRRDGNVIRLTMPELTEERRKEYVKLAKGKAE 121
Query: 214 EGKVVM 219
+GKV +
Sbjct: 122 DGKVAV 127
>gi|373857321|ref|ZP_09600063.1| ribosome recycling factor [Bacillus sp. 1NLA3E]
gi|372452971|gb|EHP26440.1| ribosome recycling factor [Bacillus sp. 1NLA3E]
Length = 185
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/119 (51%), Positives = 84/119 (70%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K +M + I S+R GR+N ++LDK+ VEYYG+P + IA I+ P++ L+IQP
Sbjct: 10 KDKMSKAISAYTRELASIRAGRANASLLDKLTVEYYGAPTPVNQIAGISVPEARLLVIQP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
YDK+ L IEKAI+ SDLG+ P+NDG +IRL +PQLT ERRKEL KV+ + +EE KV +
Sbjct: 70 YDKTILGDIEKAILKSDLGLNPSNDGSIIRLAIPQLTEERRKELVKVIKRDSEEAKVAV 128
>gi|154686069|ref|YP_001421230.1| ribosome recycling factor [Bacillus amyloliquefaciens FZB42]
gi|375362297|ref|YP_005130336.1| Ribosome recycling factor [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|384265236|ref|YP_005420943.1| Ribosome recycling factor [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|385264779|ref|ZP_10042866.1| ribosome recycling factor [Bacillus sp. 5B6]
gi|387898234|ref|YP_006328530.1| ribosome recycling factor [Bacillus amyloliquefaciens Y2]
gi|394993995|ref|ZP_10386732.1| ribosome recycling factor [Bacillus sp. 916]
gi|421731676|ref|ZP_16170799.1| ribosome recycling factor [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|429505206|ref|YP_007186390.1| ribosome recycling factor [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|451346975|ref|YP_007445606.1| ribosome recycling factor [Bacillus amyloliquefaciens IT-45]
gi|452855599|ref|YP_007497282.1| ribosome recycling factor [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
gi|166230410|sp|A7Z4S3.1|RRF_BACA2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|154351920|gb|ABS73999.1| Frr [Bacillus amyloliquefaciens FZB42]
gi|371568291|emb|CCF05141.1| Ribosome recycling factor [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|380498589|emb|CCG49627.1| Ribosome recycling factor [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|385149275|gb|EIF13212.1| ribosome recycling factor [Bacillus sp. 5B6]
gi|387172344|gb|AFJ61805.1| ribosome recycling factor [Bacillus amyloliquefaciens Y2]
gi|393805189|gb|EJD66571.1| ribosome recycling factor [Bacillus sp. 916]
gi|407073889|gb|EKE46879.1| ribosome recycling factor [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|429486796|gb|AFZ90720.1| ribosome recycling factor [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|449850733|gb|AGF27725.1| ribosome recycling factor [Bacillus amyloliquefaciens IT-45]
gi|452079859|emb|CCP21617.1| ribosome recycling factor [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
Length = 185
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 84/119 (70%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K RME+ + SVR GR+NP++LDK+ VEYYG+ L ++ IN P++ L++ P
Sbjct: 10 KERMEKAVAAYSRELASVRAGRANPSLLDKVTVEYYGAQTPLNQLSSINVPEARMLVVTP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
YDK+++ IEKAI+ +DLG+TP +DG +IR+ +P LT ERRKEL KVV K AEE KV +
Sbjct: 70 YDKTAIGDIEKAILKADLGVTPTSDGTIIRIAIPALTEERRKELVKVVKKYAEEAKVAV 128
>gi|398346764|ref|ZP_10531467.1| ribosome recycling factor [Leptospira broomii str. 5399]
Length = 184
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 57/120 (47%), Positives = 89/120 (74%)
Query: 100 VKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQ 159
+K++M++T++++R +F +RTGR+NPA+++ I+VEYYG+ + + I+ P+ L+I
Sbjct: 10 MKSKMDKTVELLRKDFAGIRTGRANPALIEDIKVEYYGALTPINQLGNISVPEPRLLVIS 69
Query: 160 PYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
PYDK +K IEK I +S LG+ P NDG VIR+ +P+LT ERRKEL+KVV ++EE KV +
Sbjct: 70 PYDKGIIKDIEKGIQASGLGLQPTNDGSVIRIVIPELTGERRKELAKVVKSKSEEKKVAV 129
>gi|269797920|ref|YP_003311820.1| ribosome recycling factor [Veillonella parvula DSM 2008]
gi|294793662|ref|ZP_06758799.1| ribosome recycling factor [Veillonella sp. 3_1_44]
gi|269094549|gb|ACZ24540.1| ribosome recycling factor [Veillonella parvula DSM 2008]
gi|294455232|gb|EFG23604.1| ribosome recycling factor [Veillonella sp. 3_1_44]
Length = 186
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 59/117 (50%), Positives = 88/117 (75%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
RM ++I+ ++ F S+RTGR++ A+LDK+ V+YYGSP + +A I+ P+ ++I P+D
Sbjct: 13 RMNKSIEALKHEFASIRTGRASVALLDKVMVDYYGSPSPINQVANISVPEPRMIVIAPWD 72
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
K+ + +IEKAI+ SDLG+ P NDG IRL++PQLT ERRKE+ KVV K+AE+ KV +
Sbjct: 73 KTMIGAIEKAILQSDLGLNPGNDGAQIRLSIPQLTEERRKEIVKVVHKKAEDAKVAV 129
>gi|338813316|ref|ZP_08625445.1| ribosome recycling factor [Acetonema longum DSM 6540]
gi|337274675|gb|EGO63183.1| ribosome recycling factor [Acetonema longum DSM 6540]
Length = 186
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 88/117 (75%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
RM++ ++ +R ++ ++R GR+ PA+LDKI V+YYG+P + + I+ P+ ++IQP++
Sbjct: 13 RMQKAVEALRKDYQTLRAGRATPAILDKITVDYYGTPTPVNQVGNISVPEPRMIVIQPWE 72
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
K+ L IEKAI+ SDLG+TP++DG VIRL +PQLT +RR EL KV+ K+AEE +V +
Sbjct: 73 KTMLGPIEKAILKSDLGLTPSSDGSVIRLLIPQLTQQRRTELVKVIHKKAEEARVAI 129
>gi|149183486|ref|ZP_01861915.1| ribosome recycling factor [Bacillus sp. SG-1]
gi|148848798|gb|EDL63019.1| ribosome recycling factor [Bacillus sp. SG-1]
Length = 185
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/126 (47%), Positives = 91/126 (72%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
S++ + K RM + I S+R GR+N ++LDKI V+YYG+P + +A I+ P++
Sbjct: 3 SNVMSNTKERMTKAIQTFTRELASIRAGRANASLLDKITVDYYGAPTPVNQLAGISVPEA 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
L+IQPYDKS+L IEKAI+ SDLG+TP++DG ++R+ +PQLT ERRK+L K+V K++E
Sbjct: 63 RMLVIQPYDKSALGDIEKAIMKSDLGITPSSDGNILRIVIPQLTEERRKDLVKLVKKESE 122
Query: 214 EGKVVM 219
+ KV +
Sbjct: 123 DAKVAI 128
>gi|153954045|ref|YP_001394810.1| ribosome recycling factor [Clostridium kluyveri DSM 555]
gi|219854658|ref|YP_002471780.1| hypothetical protein CKR_1315 [Clostridium kluyveri NBRC 12016]
gi|189044051|sp|A5N831.1|RRF_CLOK5 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|254809504|sp|B9E1J1.1|RRF_CLOK1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|146346926|gb|EDK33462.1| Frr [Clostridium kluyveri DSM 555]
gi|219568382|dbj|BAH06366.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 185
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/117 (51%), Positives = 87/117 (74%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M +T+D++ S++ GR+NPA+LDKIEVEYYG+ + +A I+ P++ L IQP+D
Sbjct: 12 KMNKTVDVLVKELASMKAGRANPAILDKIEVEYYGAMTPISQLAGISIPEARILAIQPWD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
KS+LKSIEKAI+ SDLG+ P+NDGE+IRL +P+LT E RK + K + K E+ KV +
Sbjct: 72 KSALKSIEKAILKSDLGINPSNDGEIIRLIIPELTEETRKNIVKNIKKTGEDSKVAI 128
>gi|354613711|ref|ZP_09031619.1| Ribosome-recycling factor [Saccharomonospora paurometabolica YIM
90007]
gi|353221950|gb|EHB86280.1| Ribosome-recycling factor [Saccharomonospora paurometabolica YIM
90007]
Length = 185
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 84/119 (70%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + +ME+ + + + + SVRTGR++P+M +I VEYYG P L +A +N P++ +I
Sbjct: 8 DAEEKMEKAVSVAKEDLTSVRTGRASPSMFARIHVEYYGVPTPLNQLASVNIPEARMAVI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
+PYD S L ++E+AI SDLG+ P+NDG VIR+ +PQLT ERRKE+ KV + EEGK+
Sbjct: 68 KPYDTSQLGAVERAIRDSDLGVNPSNDGTVIRVVIPQLTEERRKEMVKVAKSKGEEGKI 126
>gi|293374703|ref|ZP_06621011.1| ribosome recycling factor [Turicibacter sanguinis PC909]
gi|325840609|ref|ZP_08167090.1| ribosome recycling factor [Turicibacter sp. HGF1]
gi|292646617|gb|EFF64619.1| ribosome recycling factor [Turicibacter sanguinis PC909]
gi|325490258|gb|EGC92591.1| ribosome recycling factor [Turicibacter sp. HGF1]
Length = 185
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 59/121 (48%), Positives = 90/121 (74%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+ +ARM + ID ++ F+ +RTGR++ A+LD I+V+YYG P + +AQ+ P+ L++
Sbjct: 8 NAEARMSKAIDSLKREFSVLRTGRASGALLDNIQVDYYGMPSPINQMAQVTVPEPRQLVV 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
+PYDKS L++IE+AI +++G+TPNNDGEVIRL +P LT ERR+EL+K V AE+ KV
Sbjct: 68 KPYDKSMLQAIERAINEANIGLTPNNDGEVIRLNVPALTEERRRELAKKVKGFAEDAKVA 127
Query: 219 M 219
+
Sbjct: 128 I 128
>gi|357420017|ref|YP_004933009.1| ribosome recycling factor [Thermovirga lienii DSM 17291]
gi|355397483|gb|AER66912.1| ribosome recycling factor [Thermovirga lienii DSM 17291]
Length = 185
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 91/122 (74%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
KD+K RME+ ++ ++ +RTGR++PA+++ I+VEYYGS V + +A ++ PD +L
Sbjct: 7 KDLKERMEKAVEHLKKELQGIRTGRAHPALVEDIKVEYYGSMVPISQMATVSIPDPRQIL 66
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
I P+DK+++K IEKAI +S LG+ P DG+VIRL +P+LT ERR+ELSK+V K AE+ ++
Sbjct: 67 IAPWDKTAVKPIEKAIQASPLGINPQVDGDVIRLNIPELTGERRQELSKLVKKYAEDARI 126
Query: 218 VM 219
+
Sbjct: 127 AV 128
>gi|410942186|ref|ZP_11373974.1| ribosome recycling factor [Leptospira noguchii str. 2006001870]
gi|410782728|gb|EKR71731.1| ribosome recycling factor [Leptospira noguchii str. 2006001870]
Length = 184
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 57/120 (47%), Positives = 89/120 (74%)
Query: 100 VKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQ 159
+K +M++TI++V+ +F ++RTGR+NP++++ I V+YYG+ + + I+ P+ L+I
Sbjct: 10 MKTKMDKTIELVKKDFGTIRTGRANPSLVEDIRVDYYGTQTPINQLGNISVPEPRMLVIS 69
Query: 160 PYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
PYDK +K IEKAI +S LG+ P NDG VIR+ +P+LT ERRKEL+KVV ++EE KV +
Sbjct: 70 PYDKGIMKDIEKAIQTSGLGLQPTNDGVVIRIVIPELTGERRKELAKVVKSKSEEKKVAI 129
>gi|328957401|ref|YP_004374787.1| ribosome recycling factor [Carnobacterium sp. 17-4]
gi|328673725|gb|AEB29771.1| ribosome recycling factor [Carnobacterium sp. 17-4]
Length = 185
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/124 (49%), Positives = 89/124 (71%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
++I + +K +M +T ++ ++R GR+N +LD+I V YYG+P LK +AQI+ P+
Sbjct: 3 NAILETMKEKMVKTEGALQRELGTIRAGRANAGLLDRINVVYYGAPTPLKQLAQISIPEP 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
L++ P+DK+S+ IEKAI+ SDLG++P NDG VIRL +PQLT ERRKEL+K V K+AE
Sbjct: 63 RVLMVTPFDKTSISDIEKAIMQSDLGISPANDGNVIRLVIPQLTEERRKELAKKVGKEAE 122
Query: 214 EGKV 217
KV
Sbjct: 123 NAKV 126
>gi|311068174|ref|YP_003973097.1| ribosome recycling factor [Bacillus atrophaeus 1942]
gi|419823845|ref|ZP_14347379.1| ribosome recycling factor [Bacillus atrophaeus C89]
gi|310868691|gb|ADP32166.1| ribosome recycling factor [Bacillus atrophaeus 1942]
gi|388472084|gb|EIM08873.1| ribosome recycling factor [Bacillus atrophaeus C89]
Length = 185
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 59/121 (48%), Positives = 86/121 (71%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+ K RME+ + + +VR GR+NP++LDK+ VEYYG+ L ++ IN P++ L+I
Sbjct: 8 ETKERMEKAVAAYQRELATVRAGRANPSLLDKVTVEYYGAQTPLNQLSSINVPEARMLVI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
PYDK+++ IEKAI+ +DLG+TP +DG +IR+ +P LT ERRKEL K+V K AEE KV
Sbjct: 68 TPYDKTAIGDIEKAILKADLGVTPTSDGNIIRIAIPALTEERRKELVKLVKKYAEEAKVA 127
Query: 219 M 219
+
Sbjct: 128 V 128
>gi|409386899|ref|ZP_11239237.1| Ribosome recycling factor [Lactococcus raffinolactis 4877]
gi|399205887|emb|CCK20152.1| Ribosome recycling factor [Lactococcus raffinolactis 4877]
Length = 185
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/117 (51%), Positives = 86/117 (73%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
RM+++ID ++ F S+R GR+N ++LD+I V+YYG+P L +A I+ P++ LLI P+D
Sbjct: 12 RMKQSIDSLQREFGSIRAGRANASLLDRITVDYYGAPTPLNQLAGISVPEARVLLITPFD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
K+ +K IE A+ +SDLG+ P +DG VIRL +P LT ERRKEL+K V K AE GKV +
Sbjct: 72 KTVIKDIEAALNASDLGINPQSDGNVIRLVIPALTEERRKELAKEVKKTAEGGKVAI 128
>gi|398310748|ref|ZP_10514222.1| ribosome recycling factor [Bacillus mojavensis RO-H-1]
Length = 185
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 85/119 (71%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K +ME+ I + +VR GR+NP++LDK+ VEYYG+ L ++ IN P++ L+I P
Sbjct: 10 KEKMEKAIAAYQRELATVRAGRANPSLLDKVTVEYYGAQTPLNQLSSINVPEARMLVITP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
YDKS++ IEKAI+ +DLG+TP +DG +IR+ +P LT ERRKEL KVV K AE+ KV +
Sbjct: 70 YDKSAIGDIEKAILKADLGLTPTSDGNMIRIAIPALTEERRKELVKVVKKYAEDAKVAV 128
>gi|290968867|ref|ZP_06560404.1| ribosome recycling factor [Megasphaera genomosp. type_1 str. 28L]
gi|335048939|ref|ZP_08541951.1| ribosome recycling factor [Megasphaera sp. UPII 199-6]
gi|290781163|gb|EFD93754.1| ribosome recycling factor [Megasphaera genomosp. type_1 str. 28L]
gi|333764722|gb|EGL42108.1| ribosome recycling factor [Megasphaera sp. UPII 199-6]
Length = 186
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 90/117 (76%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M++TI+ ++ +F S+RTGR++ ++LD++ VEYYG+P +K +A ++ P+ S + I P++
Sbjct: 13 KMDKTIEALKRDFTSIRTGRASTSLLDRVTVEYYGTPTPIKQVANVSAPEPSLITIVPWE 72
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
+ L IEKAI+ SDLG+ PNNDG +IRL +P+ T ERRKEL+K V+K AEE KVV+
Sbjct: 73 RKILGDIEKAILKSDLGLNPNNDGAMIRLEIPKPTEERRKELTKKVSKYAEEAKVVI 129
>gi|183221973|ref|YP_001839969.1| ribosome recycling factor [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
gi|189912041|ref|YP_001963596.1| ribosome recycling factor [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|190360250|sp|B0SDN4.1|RRF_LEPBA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|238687812|sp|B0SM63.1|RRF_LEPBP RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|167776717|gb|ABZ95018.1| Ribosome recycling factor [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167780395|gb|ABZ98693.1| Ribosome recycling factor (Ribosome releasing factor; RRF)
[Leptospira biflexa serovar Patoc strain 'Patoc 1
(Paris)']
Length = 183
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 92/126 (73%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
I K ++++M++T+D ++ +F ++RTG++NP M++ + V+YYG+ L + +I P+
Sbjct: 3 DEIIKSMQSKMDKTVDALKKDFGTIRTGKANPMMVEDVRVDYYGTLTPLNQLGKIACPEP 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
+LI P++K LK IEKAI ++ LG+TPNNDG IR+ +P+LT ERRKEL+KVV ++AE
Sbjct: 63 RVILITPFEKGMLKDIEKAIFAASLGLTPNNDGSSIRINIPELTGERRKELAKVVKQKAE 122
Query: 214 EGKVVM 219
E KV +
Sbjct: 123 EKKVAI 128
>gi|291533215|emb|CBL06328.1| ribosome recycling factor [Megamonas hypermegale ART12/1]
Length = 185
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 83/115 (72%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
RM++T+ ++ F S+R GR+ PA+LDK+ VEYYGS V + + I+ P+ +LIQP++
Sbjct: 12 RMKKTLSAAKSEFASLRAGRATPALLDKVMVEYYGSLVPVNQVGNISVPEPRMILIQPWE 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
K L IEKAI SDLG++PNNDG VIRL +PQLT ERR +L K + K+AEE KV
Sbjct: 72 KPMLHEIEKAITRSDLGLSPNNDGTVIRLNIPQLTEERRTDLVKTLNKRAEESKV 126
>gi|421100810|ref|ZP_15561431.1| ribosome recycling factor [Leptospira borgpetersenii str.
200901122]
gi|410796208|gb|EKR98346.1| ribosome recycling factor [Leptospira borgpetersenii str.
200901122]
Length = 184
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 57/120 (47%), Positives = 90/120 (75%)
Query: 100 VKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQ 159
+K +M++TID+++ +F ++RTGR+NP++++ I V+YYG+ + + I+ P+ L+I
Sbjct: 10 MKTKMDKTIDLLKKDFGTIRTGRANPSLVEDIRVDYYGTLTPINQLGNISVPEPRILVIS 69
Query: 160 PYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
PYDK +K IEKAI +S LG+ P+NDG VIR+ +P+LT ERRKEL+KVV ++EE KV +
Sbjct: 70 PYDKGIMKDIEKAIQASGLGLQPSNDGVVIRIIIPELTGERRKELAKVVKSKSEEKKVAI 129
>gi|384175394|ref|YP_005556779.1| ribosome recycling factor [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
gi|349594618|gb|AEP90805.1| ribosome recycling factor [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
Length = 185
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 59/119 (49%), Positives = 85/119 (71%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K +ME+ I + +VR GR+NP++LDK+ VEYYG+ L ++ IN P++ L+I P
Sbjct: 10 KEKMEKAIAAYQRELATVRAGRANPSLLDKVTVEYYGAQTPLNQLSSINVPEARMLVITP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
YDK+++ IEKAI+ +DLG+TP +DG +IR+ +P LT ERRKEL KV+ K AEE KV +
Sbjct: 70 YDKTAIGDIEKAILKADLGLTPTSDGNMIRIAIPALTEERRKELVKVIKKYAEEAKVAV 128
>gi|418678138|ref|ZP_13239412.1| ribosome recycling factor [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|418686537|ref|ZP_13247703.1| ribosome recycling factor [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|418741061|ref|ZP_13297437.1| ribosome recycling factor [Leptospira kirschneri serovar Valbuzzi
str. 200702274]
gi|421089379|ref|ZP_15550189.1| ribosome recycling factor [Leptospira kirschneri str. 200802841]
gi|421130082|ref|ZP_15590280.1| ribosome recycling factor [Leptospira kirschneri str. 2008720114]
gi|400321328|gb|EJO69188.1| ribosome recycling factor [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|410001910|gb|EKO52437.1| ribosome recycling factor [Leptospira kirschneri str. 200802841]
gi|410358681|gb|EKP05832.1| ribosome recycling factor [Leptospira kirschneri str. 2008720114]
gi|410738970|gb|EKQ83702.1| ribosome recycling factor [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|410751656|gb|EKR08633.1| ribosome recycling factor [Leptospira kirschneri serovar Valbuzzi
str. 200702274]
Length = 184
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 57/120 (47%), Positives = 89/120 (74%)
Query: 100 VKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQ 159
+K +M++TI++V+ +F ++RTGR+NP++++ I V+YYG+ + + I+ P+ L+I
Sbjct: 10 MKTKMDKTIELVKKDFGTIRTGRANPSLVEDIRVDYYGTQTPINQLGNISVPEPRILVIS 69
Query: 160 PYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
PYDK +K IEKAI +S LG+ P NDG VIR+ +P+LT ERRKEL+KVV ++EE KV +
Sbjct: 70 PYDKGIMKDIEKAIQTSGLGLQPTNDGVVIRIVIPELTGERRKELAKVVKSKSEEKKVAI 129
>gi|385652671|ref|ZP_10047224.1| ribosome recycling factor [Leucobacter chromiiresistens JG 31]
Length = 184
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 88/122 (72%), Gaps = 1/122 (0%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
DVK RM R ++ + +F +VRTGR+NP++L ++V+YYG+P L +A + D+ SLL+
Sbjct: 8 DVKDRMSRAVESAKESFATVRTGRANPSLLQNVQVDYYGTPTPLSQLASVQNQDARSLLV 67
Query: 159 QPYDKSSLKSIEKAIVS-SDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
PYDK ++K IE+AI +LG P+NDG VIRL+LP+LT+ERRKE K+V +AE+ +V
Sbjct: 68 TPYDKGAMKDIEQAIRDMPNLGANPSNDGSVIRLSLPELTTERRKEFVKIVKGKAEDARV 127
Query: 218 VM 219
+
Sbjct: 128 AV 129
>gi|451334967|ref|ZP_21905537.1| Ribosome recycling factor [Amycolatopsis azurea DSM 43854]
gi|449422506|gb|EMD27880.1| Ribosome recycling factor [Amycolatopsis azurea DSM 43854]
Length = 185
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 86/119 (72%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + +ME+ + + + + +SVRTGR++P M ++ V+YYG+P L +A +N P++ LI
Sbjct: 8 DAEEKMEKAVSVAKEDLSSVRTGRAHPGMFSRVVVDYYGAPTPLNQLAGVNIPEARMALI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
+PYD++SL +IEKAI SDLG+ P+NDG VIR+ +PQLT ERRKE+ KV + E+ +V
Sbjct: 68 KPYDQTSLNAIEKAIRESDLGVNPSNDGNVIRIVIPQLTEERRKEMVKVAKSKGEDARV 126
>gi|367469622|ref|ZP_09469364.1| Ribosome recycling factor [Patulibacter sp. I11]
gi|365815299|gb|EHN10455.1| Ribosome recycling factor [Patulibacter sp. I11]
Length = 190
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 88/119 (73%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D K RM + ++ F +VRTGR++P +LD++ V+Y+G P +L+ ++ I+ P++ L +
Sbjct: 13 DAKERMAKAVEQTSGEFATVRTGRASPNLLDRVVVDYHGVPTALRQLSTISAPEARLLTV 72
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
QPYD SS+K IEKAI SDLG+TP+NDG+ IRL +P++T ERR+E+ KV + AEEG++
Sbjct: 73 QPYDPSSIKQIEKAISDSDLGVTPSNDGKTIRLGIPEMTEERRREMVKVARQIAEEGRI 131
>gi|392394589|ref|YP_006431191.1| ribosome recycling factor [Desulfitobacterium dehalogenans ATCC
51507]
gi|390525667|gb|AFM01398.1| ribosome recycling factor [Desulfitobacterium dehalogenans ATCC
51507]
Length = 185
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/122 (50%), Positives = 89/122 (72%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K+ + RM + ++ ++ ++++R GR+NP MLDKI VEYYG+ + +A I+ P+ L
Sbjct: 7 KEAEDRMVKAVEALKREYSTIRAGRANPNMLDKITVEYYGTQTPVNQLANISVPEPRMLA 66
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
IQP+DKSSL IEKAI+ SDLG+ P++DG VIRL +PQLT+ERR E+ K V K+AEE +V
Sbjct: 67 IQPWDKSSLPMIEKAILKSDLGLNPSSDGAVIRLIIPQLTAERRTEIVKTVKKKAEESRV 126
Query: 218 VM 219
+
Sbjct: 127 AV 128
>gi|213691943|ref|YP_002322529.1| ribosome recycling factor [Bifidobacterium longum subsp. infantis
ATCC 15697 = JCM 1222]
gi|384199098|ref|YP_005584841.1| ribosome recycling factor [Bifidobacterium longum subsp. infantis
ATCC 15697 = JCM 1222]
gi|254809493|sp|B7GQS1.1|RRF_BIFLI RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|213523404|gb|ACJ52151.1| ribosome recycling factor [Bifidobacterium longum subsp. infantis
ATCC 15697 = JCM 1222]
gi|320458050|dbj|BAJ68671.1| ribosome recycling factor [Bifidobacterium longum subsp. infantis
ATCC 15697 = JCM 1222]
Length = 183
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 88/119 (73%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
+ +M +T++ + NF+ +RTGR+NPA+L+ I V+YYG+P +K++A I P+ +L + P
Sbjct: 8 REQMAKTVENTKENFSGIRTGRANPALLNGITVDYYGAPTPIKAVASIGVPEPRTLSVTP 67
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
+D S ++EKA+ +SDLG++PN DG VIRLT+P+LT ERRKE K+ +AE+GKV +
Sbjct: 68 FDASQAGAVEKALRNSDLGVSPNRDGNVIRLTMPELTEERRKEYVKLAKGKAEDGKVAV 126
>gi|320527474|ref|ZP_08028655.1| ribosome recycling factor [Solobacterium moorei F0204]
gi|320132187|gb|EFW24736.1| ribosome recycling factor [Solobacterium moorei F0204]
Length = 182
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 85/115 (73%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M++ ID +++ N+VRTG +N MLD++EV+YYGSP L IA ++ + +L+I+PYD
Sbjct: 12 KMDKVIDHLQSELNTVRTGAANVKMLDRVEVDYYGSPTPLNQIAALSVSEGRTLVIKPYD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
SSLK+IE A +DLG+ P+NDG VIRLT+PQLT E RKE++K V K EE K+
Sbjct: 72 PSSLKAIEHACNEADLGIAPSNDGTVIRLTVPQLTGETRKEMTKKVDKMGEECKI 126
>gi|23466062|ref|NP_696665.1| ribosome recycling factor [Bifidobacterium longum NCC2705]
gi|189439270|ref|YP_001954351.1| ribosome recycling factor [Bifidobacterium longum DJO10A]
gi|227547303|ref|ZP_03977352.1| ribosome recycling factor [Bifidobacterium longum subsp. longum
ATCC 55813]
gi|239621373|ref|ZP_04664404.1| ribosome recycling factor [Bifidobacterium longum subsp. infantis
CCUG 52486]
gi|312132645|ref|YP_003999984.1| frr [Bifidobacterium longum subsp. longum BBMN68]
gi|317482870|ref|ZP_07941878.1| ribosome recycling factor [Bifidobacterium sp. 12_1_47BFAA]
gi|322689306|ref|YP_004209040.1| ribosome recycling factor [Bifidobacterium longum subsp. infantis
157F]
gi|322691318|ref|YP_004220888.1| ribosome recycling factor [Bifidobacterium longum subsp. longum JCM
1217]
gi|419848110|ref|ZP_14371236.1| ribosome recycling factor [Bifidobacterium longum subsp. longum
1-6B]
gi|419849151|ref|ZP_14372214.1| ribosome recycling factor [Bifidobacterium longum subsp. longum
35B]
gi|419852083|ref|ZP_14374980.1| ribosome recycling factor [Bifidobacterium longum subsp. longum
2-2B]
gi|419856041|ref|ZP_14378784.1| ribosome recycling factor [Bifidobacterium longum subsp. longum
44B]
gi|34924973|sp|Q8G483.1|RRF_BIFLO RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|238692052|sp|B3DRT4.1|RRF_BIFLD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|23326787|gb|AAN25301.1| ribosome recycling factor [Bifidobacterium longum NCC2705]
gi|189427705|gb|ACD97853.1| Ribosome recycling factor [Bifidobacterium longum DJO10A]
gi|227212262|gb|EEI80158.1| ribosome recycling factor [Bifidobacterium longum subsp. infantis
ATCC 55813]
gi|239515834|gb|EEQ55701.1| ribosome recycling factor [Bifidobacterium longum subsp. infantis
CCUG 52486]
gi|291516839|emb|CBK70455.1| ribosome recycling factor [Bifidobacterium longum subsp. longum F8]
gi|311773596|gb|ADQ03084.1| Frr [Bifidobacterium longum subsp. longum BBMN68]
gi|316915715|gb|EFV37129.1| ribosome recycling factor [Bifidobacterium sp. 12_1_47BFAA]
gi|320456174|dbj|BAJ66796.1| ribosome recycling factor [Bifidobacterium longum subsp. longum JCM
1217]
gi|320460642|dbj|BAJ71262.1| ribosome recycling factor [Bifidobacterium longum subsp. infantis
157F]
gi|386408788|gb|EIJ23680.1| ribosome recycling factor [Bifidobacterium longum subsp. longum
1-6B]
gi|386411857|gb|EIJ26567.1| ribosome recycling factor [Bifidobacterium longum subsp. longum
2-2B]
gi|386412775|gb|EIJ27425.1| ribosome recycling factor [Bifidobacterium longum subsp. longum
35B]
gi|386414329|gb|EIJ28888.1| ribosome recycling factor [Bifidobacterium longum subsp. longum
44B]
Length = 183
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 88/119 (73%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K +M +T++ + NF+ +RTGR+NPA+L+ I V+YYG+P +K++A I P+ +L + P
Sbjct: 8 KEQMAKTVENTKENFSGIRTGRANPALLNGITVDYYGAPTPIKAVASIGVPEPRTLSVTP 67
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
+D S ++EKA+ +SDLG++PN DG VIRLT+P+LT +RRKE K+ +AE+GKV +
Sbjct: 68 FDASQAGAVEKALRNSDLGISPNRDGNVIRLTMPELTEDRRKEYVKLAKGKAEDGKVAV 126
>gi|365873882|ref|ZP_09413415.1| ribosome recycling factor [Thermanaerovibrio velox DSM 12556]
gi|363983969|gb|EHM10176.1| ribosome recycling factor [Thermanaerovibrio velox DSM 12556]
Length = 185
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 93/122 (76%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K++K + E++I+ +R +RTGR++PA+++ I+V+Y+G+ +K +A + P+S L+
Sbjct: 7 KEMKQKTEKSIEHLRGTLQGIRTGRAHPALVEDIKVDYFGTLTPIKQMATVTVPESRQLV 66
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
I P+DK++LK+IEKAI SS LG+TP DG+ +R+TLP+LT ERR+ELSK+V K AEE +V
Sbjct: 67 ITPWDKTALKAIEKAIQSSSLGVTPKTDGDSVRVTLPELTKERRQELSKLVNKYAEEARV 126
Query: 218 VM 219
+
Sbjct: 127 AI 128
>gi|440503068|gb|AGC09632.1| putative ribosome recycling factor [uncultured bacterium]
gi|440503146|gb|AGC09680.1| putative ribosome recycling factor [uncultured bacterium]
Length = 185
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 57/121 (47%), Positives = 89/121 (73%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + RM + ID ++ + S+RTGR++P++++++ VEYYGS L +A I+ P+ L+I
Sbjct: 8 DAETRMGKAIDALKRDLGSIRTGRASPSLVERLPVEYYGSSTPLNQLAGISVPEPRLLVI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QP+D+ S+ +IEKAI+ S+LG+ P+NDG+VIR+ +P LT ERRK+L K+V EEGKV
Sbjct: 68 QPWDRGSMAAIEKAIMKSELGLNPSNDGQVIRIAIPSLTEERRKQLVKLVHGHVEEGKVA 127
Query: 219 M 219
+
Sbjct: 128 L 128
>gi|375090663|ref|ZP_09736976.1| ribosome recycling factor [Facklamia languida CCUG 37842]
gi|374565084|gb|EHR36360.1| ribosome recycling factor [Facklamia languida CCUG 37842]
Length = 186
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 86/122 (70%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
KD K RM+++I+ + ++R G +N ++LD++ VEYYG+ L +A I P+ L+
Sbjct: 8 KDTKGRMQKSIEAFQRELGTIRAGVANASILDRVSVEYYGAETPLNQLASITIPEPRMLM 67
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
I PYDKSSL++IEK I+ SD+G+TP NDGEVIRL +P LT ERR++L KVV K+ E K+
Sbjct: 68 ISPYDKSSLQNIEKGILMSDVGITPTNDGEVIRLVIPALTKERREDLVKVVGKEQENAKI 127
Query: 218 VM 219
+
Sbjct: 128 AI 129
>gi|375099453|ref|ZP_09745716.1| ribosome recycling factor [Saccharomonospora cyanea NA-134]
gi|374660185|gb|EHR60063.1| ribosome recycling factor [Saccharomonospora cyanea NA-134]
Length = 185
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 81/119 (68%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + +ME+ + + + SVRTGR+ PAM +I VEYYG+P L +A +N P++ ++
Sbjct: 8 DAEEKMEKAVSFAKEDLASVRTGRATPAMFSRIVVEYYGAPTPLNQLASVNIPEARMAVV 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
+PYD S L +IEKAI SDLG+ P NDG +IR+ +PQLT ERRKE+ KV + EE +V
Sbjct: 68 KPYDASQLAAIEKAIRDSDLGVNPTNDGNIIRVVIPQLTEERRKEMVKVAKSKGEEARV 126
>gi|385678485|ref|ZP_10052413.1| ribosome recycling factor [Amycolatopsis sp. ATCC 39116]
Length = 185
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 86/119 (72%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + +ME+ + + + +SVRTGR+NP M +I VE YGS + L +A +N P++ +++
Sbjct: 8 DAEEKMEKAVSFAKEDLSSVRTGRANPGMFARIMVEAYGSTMPLNQVAGVNIPEARMVIV 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
+PYD+ L +IEKAI SDLG+ P+NDG++IR+T+PQLT ERRKE+ K+V + E+ KV
Sbjct: 68 KPYDQGQLGAIEKAIRESDLGVNPSNDGQIIRITIPQLTEERRKEMVKMVKAKGEDAKV 126
>gi|169824406|ref|YP_001692017.1| ribosome recycling factor [Finegoldia magna ATCC 29328]
gi|302380616|ref|ZP_07269081.1| ribosome recycling factor [Finegoldia magna ACS-171-V-Col3]
gi|303233629|ref|ZP_07320283.1| ribosome recycling factor [Finegoldia magna BVS033A4]
gi|417925958|ref|ZP_12569371.1| ribosome recycling factor [Finegoldia magna SY403409CC001050417]
gi|238687737|sp|B0S187.1|RRF_FINM2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|167831211|dbj|BAG08127.1| ribosome recycling factor [Finegoldia magna ATCC 29328]
gi|302311559|gb|EFK93575.1| ribosome recycling factor [Finegoldia magna ACS-171-V-Col3]
gi|302495063|gb|EFL54815.1| ribosome recycling factor [Finegoldia magna BVS033A4]
gi|341590560|gb|EGS33798.1| ribosome recycling factor [Finegoldia magna SY403409CC001050417]
Length = 185
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/124 (49%), Positives = 90/124 (72%)
Query: 96 IEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSS 155
I KD++ + ++T+ ++ +VR GR+NP++LD I VEYYG+ LK +A I+ P++
Sbjct: 5 ILKDMETKADKTLHALKEELKTVRAGRANPSILDNIMVEYYGTSTPLKQVATISAPEARL 64
Query: 156 LLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEG 215
L IQP+DKS +K IEK I +S+LG+TP+NDG +IRL PQLT +RRKEL+KVV + E+
Sbjct: 65 LTIQPWDKSIMKEIEKQIQASNLGITPSNDGTIIRLPFPQLTEDRRKELTKVVKEYGEKS 124
Query: 216 KVVM 219
KV +
Sbjct: 125 KVTI 128
>gi|254443219|ref|ZP_05056695.1| ribosome recycling factor [Verrucomicrobiae bacterium DG1235]
gi|198257527|gb|EDY81835.1| ribosome recycling factor [Verrucomicrobiae bacterium DG1235]
Length = 186
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/120 (50%), Positives = 91/120 (75%)
Query: 100 VKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQ 159
++ ++E+ I+ F V TG++NP M++ I VE YGS +SLK +A I TPD+ ++ IQ
Sbjct: 10 LEEKVEKAIEHTANEFAGVNTGKANPGMVEGISVEAYGSQMSLKEMAAITTPDARTIAIQ 69
Query: 160 PYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
P+DKS +K+IEKAI++S++G+TP G+VIRL LP+LT ERR+ L KVV+KQAE+G+V +
Sbjct: 70 PWDKSVIKAIEKAILTSNIGITPAIMGDVIRLPLPELTGERRQSLVKVVSKQAEDGRVAI 129
>gi|395203924|ref|ZP_10394967.1| ribosome recycling factor [Propionibacterium humerusii P08]
gi|422439620|ref|ZP_16516441.1| ribosome recycling factor [Propionibacterium acnes HL037PA3]
gi|422471774|ref|ZP_16548265.1| ribosome recycling factor [Propionibacterium acnes HL037PA2]
gi|422571876|ref|ZP_16647453.1| ribosome recycling factor [Propionibacterium acnes HL044PA1]
gi|313836793|gb|EFS74507.1| ribosome recycling factor [Propionibacterium acnes HL037PA2]
gi|314929799|gb|EFS93630.1| ribosome recycling factor [Propionibacterium acnes HL044PA1]
gi|314972228|gb|EFT16325.1| ribosome recycling factor [Propionibacterium acnes HL037PA3]
gi|328907655|gb|EGG27419.1| ribosome recycling factor [Propionibacterium humerusii P08]
Length = 184
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 59/126 (46%), Positives = 85/126 (67%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
S I KD + +M + R F ++RTGR+NPAM +K+ VEYYG+P L+ +A P++
Sbjct: 2 SDIIKDAEKKMGSAVGHAREEFAAIRTGRANPAMFNKLMVEYYGTPTPLQQLASFQVPEA 61
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
++LI P+DKS + +EKAI SDLG+ P+NDG V+R LP LT ERRKE K+ +AE
Sbjct: 62 RTVLIAPFDKSCVNDVEKAIRDSDLGVNPSNDGNVVRCVLPALTEERRKEYIKMAKTKAE 121
Query: 214 EGKVVM 219
EG++ +
Sbjct: 122 EGRIAV 127
>gi|283783270|ref|YP_003374024.1| ribosome recycling factor [Gardnerella vaginalis 409-05]
gi|297243503|ref|ZP_06927435.1| ribosome recycling factor [Gardnerella vaginalis AMD]
gi|298252794|ref|ZP_06976588.1| ribosome recycling factor [Gardnerella vaginalis 5-1]
gi|415709939|ref|ZP_11463518.1| ribosome recycling factor [Gardnerella vaginalis 6420B]
gi|283442171|gb|ADB14637.1| ribosome recycling factor [Gardnerella vaginalis 409-05]
gi|296888548|gb|EFH27288.1| ribosome recycling factor [Gardnerella vaginalis AMD]
gi|297533158|gb|EFH72042.1| ribosome recycling factor [Gardnerella vaginalis 5-1]
gi|388055941|gb|EIK78826.1| ribosome recycling factor [Gardnerella vaginalis 6420B]
Length = 184
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 58/126 (46%), Positives = 89/126 (70%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
S+I + +M ++++ + NF +RTGR+NPA+L+ I V+YYG+P +K++A I P+
Sbjct: 2 SAIIDQAREQMNKSVEATKENFMGIRTGRANPALLNGIMVDYYGAPTPIKAVASIGVPEP 61
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
+L + P+D S ++EKAI SDLG++PN DG VIR+T+P+LT ERRKE K+ +AE
Sbjct: 62 RTLSVTPFDASQANAVEKAIRDSDLGVSPNRDGNVIRVTMPELTEERRKEYVKLAKNKAE 121
Query: 214 EGKVVM 219
EGKV +
Sbjct: 122 EGKVAV 127
>gi|374710441|ref|ZP_09714875.1| ribosome recycling factor [Sporolactobacillus inulinus CASD]
Length = 186
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 89/127 (70%)
Query: 93 KSSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPD 152
++ + KD + RM + + + +VR GR+NP++L+K+ VEYYG+ L +A I P+
Sbjct: 3 QTELFKDAQERMGKAVKAFQRELVTVRAGRANPSLLNKVTVEYYGAETPLNQVASITVPE 62
Query: 153 SSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQA 212
+ LLIQPYD+++L +IEK I+ SDLG+TP NDG+VIR+ +P LT ERR +L K+V K A
Sbjct: 63 ARLLLIQPYDRTALPNIEKGILKSDLGVTPTNDGQVIRIAIPPLTEERRADLVKMVRKMA 122
Query: 213 EEGKVVM 219
EE K+ +
Sbjct: 123 EEAKIAV 129
>gi|335051776|ref|ZP_08544686.1| ribosome recycling factor [Propionibacterium sp. 409-HC1]
gi|342213275|ref|ZP_08706000.1| ribosome recycling factor [Propionibacterium sp. CC003-HC2]
gi|419421672|ref|ZP_13961900.1| ribosome recycling factor [Propionibacterium acnes PRP-38]
gi|422395354|ref|ZP_16475394.1| ribosome recycling factor [Propionibacterium acnes HL097PA1]
gi|422495235|ref|ZP_16571524.1| ribosome recycling factor [Propionibacterium acnes HL025PA1]
gi|313813385|gb|EFS51099.1| ribosome recycling factor [Propionibacterium acnes HL025PA1]
gi|327334225|gb|EGE75939.1| ribosome recycling factor [Propionibacterium acnes HL097PA1]
gi|333765847|gb|EGL43175.1| ribosome recycling factor [Propionibacterium sp. 409-HC1]
gi|340768819|gb|EGR91344.1| ribosome recycling factor [Propionibacterium sp. CC003-HC2]
gi|379978163|gb|EIA11488.1| ribosome recycling factor [Propionibacterium acnes PRP-38]
Length = 184
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 59/126 (46%), Positives = 85/126 (67%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
S I KD + +M +D R F ++RTGR+NPAM +K+ VEYY +P L+ +A P++
Sbjct: 2 SDIIKDAEKKMGSAVDHAREEFAAIRTGRANPAMFNKLMVEYYDTPTPLQQLASFQVPEA 61
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
++LI P+DKS + +EKAI SDLG+ P+NDG V+R LP LT ERRKE K+ +AE
Sbjct: 62 RTVLIAPFDKSCVNDVEKAIRDSDLGVNPSNDGNVVRCVLPALTEERRKEYIKMAKTKAE 121
Query: 214 EGKVVM 219
EG++ +
Sbjct: 122 EGRIAV 127
>gi|217964539|ref|YP_002350217.1| ribosome recycling factor [Listeria monocytogenes HCC23]
gi|290893573|ref|ZP_06556556.1| ribosome recycling factor [Listeria monocytogenes FSL J2-071]
gi|315282161|ref|ZP_07870629.1| ribosome recycling factor [Listeria marthii FSL S4-120]
gi|386008085|ref|YP_005926363.1| frr [Listeria monocytogenes L99]
gi|386026686|ref|YP_005947462.1| putative ribosome recycling factor [Listeria monocytogenes M7]
gi|404407751|ref|YP_006690466.1| ribosome recycling factor [Listeria monocytogenes SLCC2376]
gi|422409527|ref|ZP_16486488.1| ribosome recycling factor [Listeria monocytogenes FSL F2-208]
gi|422809394|ref|ZP_16857805.1| Ribosome recycling factor [Listeria monocytogenes FSL J1-208]
gi|254809517|sp|B8DG13.1|RRF_LISMH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|217333809|gb|ACK39603.1| ribosome recycling factor [Listeria monocytogenes HCC23]
gi|290556918|gb|EFD90449.1| ribosome recycling factor [Listeria monocytogenes FSL J2-071]
gi|307570895|emb|CAR84074.1| frr [Listeria monocytogenes L99]
gi|313608995|gb|EFR84735.1| ribosome recycling factor [Listeria monocytogenes FSL F2-208]
gi|313614193|gb|EFR87869.1| ribosome recycling factor [Listeria marthii FSL S4-120]
gi|336023267|gb|AEH92404.1| putative ribosome recycling factor [Listeria monocytogenes M7]
gi|378753008|gb|EHY63593.1| Ribosome recycling factor [Listeria monocytogenes FSL J1-208]
gi|404241900|emb|CBY63300.1| ribosome recycling factor [Listeria monocytogenes SLCC2376]
Length = 185
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 85/119 (71%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K +ME+ + ++R GR+N ++LD++ V+YYG+ + +A I+ P++ LLI P
Sbjct: 10 KEKMEKAEQALTRQLGTIRAGRANASLLDRLSVDYYGAATPVNQMASISVPEARMLLITP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
YDK+ L IEKAI+ SDLG+TPNNDG V+RL++PQLT ERRKEL K V K+AEE KV +
Sbjct: 70 YDKTILGEIEKAILKSDLGLTPNNDGSVLRLSIPQLTEERRKELVKEVKKEAEEAKVAV 128
>gi|300812543|ref|ZP_07092960.1| ribosome recycling factor [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|300496416|gb|EFK31521.1| ribosome recycling factor [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
Length = 185
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 86/119 (72%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K+ M ++I++ ++N +VR G +N ++LD++ VEYYG P L +A I P+ L+I P
Sbjct: 10 KSNMNKSIEVYQSNLATVRAGVANASLLDRVMVEYYGVPTPLVQLAGITIPEPRVLMITP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
YDK+SL IE AI++SDLG+TP NDG VIRL +PQLT ERR+E++K V K AEE K+ +
Sbjct: 70 YDKTSLNDIEHAILASDLGLTPANDGNVIRLVIPQLTGERRQEIAKEVGKLAEEAKIAV 128
>gi|420154987|ref|ZP_14661858.1| ribosome recycling factor [Clostridium sp. MSTE9]
gi|394759829|gb|EJF42492.1| ribosome recycling factor [Clostridium sp. MSTE9]
Length = 184
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 91/117 (77%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M++T+ ++ + ++R GR+NPA+LDKI V+YYG+P ++ +A I+ ++ L IQP+D
Sbjct: 11 KMKKTLSVLTNEYTTIRAGRANPAVLDKIMVDYYGTPTAVNQLAAISVSEARLLTIQPWD 70
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
SS+++IEKAI+SS+LG+ P +DG+VIRL PQLT ERR++++K +AK +EE KV +
Sbjct: 71 ASSVRAIEKAILSSELGINPQSDGKVIRLMFPQLTEERRRDITKDIAKMSEEAKVAV 127
>gi|375085855|ref|ZP_09732477.1| ribosome recycling factor [Megamonas funiformis YIT 11815]
gi|374566340|gb|EHR37585.1| ribosome recycling factor [Megamonas funiformis YIT 11815]
Length = 185
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 83/115 (72%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
RM++T+ ++ F S+R GR+ PA+LDK+ VEYYGS V + + I+ P+ +LIQP++
Sbjct: 12 RMKKTLSAAKSEFVSLRAGRATPALLDKVMVEYYGSLVPVNQVGNISVPEPRMILIQPWE 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
K L IEKAI SDLG++PNNDG VIRL +PQLT ERR +L K + K+AEE KV
Sbjct: 72 KPMLHEIEKAITRSDLGLSPNNDGTVIRLNIPQLTEERRTDLVKTLNKRAEESKV 126
>gi|302874652|ref|YP_003843285.1| ribosome recycling factor [Clostridium cellulovorans 743B]
gi|307690735|ref|ZP_07633181.1| ribosome recycling factor [Clostridium cellulovorans 743B]
gi|302577509|gb|ADL51521.1| ribosome recycling factor [Clostridium cellulovorans 743B]
Length = 185
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 89/117 (76%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M++T+ +++ + N+++ G++NP MLD+IEVEYYG+ + +A I+ P+ LLIQP+D
Sbjct: 12 KMKKTVTVLKKDLNTLKAGKANPTMLDRIEVEYYGTMTPINQVANISAPEPRILLIQPWD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
K SLK+IEKAI+ SDLG+ PN+DG VIRL +P+LT E R++++K V K E+ KV +
Sbjct: 72 KGSLKAIEKAILISDLGINPNSDGNVIRLIVPELTEETRRDITKKVKKFGEDAKVAV 128
>gi|309800830|ref|ZP_07694962.1| ribosome recycling factor [Bifidobacterium dentium JCVIHMP022]
gi|308222366|gb|EFO78646.1| ribosome recycling factor [Bifidobacterium dentium JCVIHMP022]
Length = 184
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 58/126 (46%), Positives = 89/126 (70%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
++I KA+M ++++ + NF+ +RTGR+NPA+L+ I V+YYG+P LK++A I P+
Sbjct: 2 ANIVDQAKAQMAKSVESTKENFSGIRTGRANPALLNGITVDYYGAPTPLKAVATIGVPEP 61
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
+L + P+D S ++EKA+ SDLG +P DG VIRLT+P+LT ERRKE K+ +AE
Sbjct: 62 RTLSVTPFDASQANAVEKALRDSDLGASPRRDGNVIRLTMPELTEERRKEYVKLAKGKAE 121
Query: 214 EGKVVM 219
+GKV +
Sbjct: 122 DGKVAV 127
>gi|306822703|ref|ZP_07456081.1| ribosome recycling factor [Bifidobacterium dentium ATCC 27679]
gi|304554248|gb|EFM42157.1| ribosome recycling factor [Bifidobacterium dentium ATCC 27679]
Length = 186
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 58/126 (46%), Positives = 89/126 (70%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
++I KA+M ++++ + NF+ +RTGR+NPA+L+ I V+YYG+P LK++A I P+
Sbjct: 4 ANIVDQAKAQMAKSVESTKENFSGIRTGRANPALLNGITVDYYGAPTPLKAVATIGVPEP 63
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
+L + P+D S ++EKA+ SDLG +P DG VIRLT+P+LT ERRKE K+ +AE
Sbjct: 64 RTLSVTPFDASQANAVEKALRDSDLGASPRRDGNVIRLTMPELTEERRKEYVKLAKGKAE 123
Query: 214 EGKVVM 219
+GKV +
Sbjct: 124 DGKVAV 129
>gi|399923806|ref|ZP_10781164.1| ribosome recycling factor [Peptoniphilus rhinitidis 1-13]
Length = 185
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/124 (48%), Positives = 91/124 (73%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
S ++K+ ++RM++++ + + S+R GR+N ++LDKI V+YYG L +A ++ P+
Sbjct: 3 SDLKKNTESRMQKSVSSLSESLQSIRAGRANTSLLDKIFVDYYGQQTPLNQVASLSAPEP 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
L IQP+D + + IEKAI+ SDLG+TP+NDG+VIRL +PQLT ERRK+L+K+V K AE
Sbjct: 63 RLLAIQPWDANLIPDIEKAILKSDLGITPSNDGKVIRLVIPQLTEERRKDLTKLVGKDAE 122
Query: 214 EGKV 217
E KV
Sbjct: 123 EAKV 126
>gi|16803354|ref|NP_464839.1| ribosome recycling factor [Listeria monocytogenes EGD-e]
gi|46907540|ref|YP_013929.1| ribosome recycling factor [Listeria monocytogenes serotype 4b str.
F2365]
gi|47094294|ref|ZP_00231999.1| ribosome recycling factor [Listeria monocytogenes str. 4b H7858]
gi|47096939|ref|ZP_00234516.1| ribosome recycling factor [Listeria monocytogenes str. 1/2a F6854]
gi|226223915|ref|YP_002758022.1| ribosome recycling factor [Listeria monocytogenes serotype 4b str.
CLIP 80459]
gi|254824627|ref|ZP_05229628.1| ribosome recycling factor [Listeria monocytogenes FSL J1-194]
gi|254828675|ref|ZP_05233362.1| ribosome recycling factor [Listeria monocytogenes FSL N3-165]
gi|254852635|ref|ZP_05241983.1| ribosome recycling factor [Listeria monocytogenes FSL R2-503]
gi|254911988|ref|ZP_05262000.1| ribosome recycling factor [Listeria monocytogenes J2818]
gi|254932371|ref|ZP_05265730.1| ribosome recycling factor [Listeria monocytogenes HPB2262]
gi|254936315|ref|ZP_05268012.1| ribosome recycling factor [Listeria monocytogenes F6900]
gi|254992874|ref|ZP_05275064.1| ribosome recycling factor [Listeria monocytogenes FSL J2-064]
gi|255026995|ref|ZP_05298981.1| ribosome recycling factor [Listeria monocytogenes FSL J2-003]
gi|255522289|ref|ZP_05389526.1| ribosome recycling factor [Listeria monocytogenes FSL J1-175]
gi|284801699|ref|YP_003413564.1| hypothetical protein LM5578_1453 [Listeria monocytogenes 08-5578]
gi|284994841|ref|YP_003416609.1| hypothetical protein LM5923_1406 [Listeria monocytogenes 08-5923]
gi|300765446|ref|ZP_07075428.1| ribosome recycling factor [Listeria monocytogenes FSL N1-017]
gi|386043625|ref|YP_005962430.1| ribosome recycling factor [Listeria monocytogenes 10403S]
gi|386046966|ref|YP_005965298.1| ribosome recycling factor [Listeria monocytogenes J0161]
gi|386050290|ref|YP_005968281.1| ribosome recycling factor [Listeria monocytogenes FSL R2-561]
gi|386053567|ref|YP_005971125.1| ribosome recycling factor [Listeria monocytogenes Finland 1998]
gi|386732052|ref|YP_006205548.1| ribosome recycling factor [Listeria monocytogenes 07PF0776]
gi|404280868|ref|YP_006681766.1| ribosome recycling factor [Listeria monocytogenes SLCC2755]
gi|404283805|ref|YP_006684702.1| ribosome recycling factor [Listeria monocytogenes SLCC2372]
gi|404286732|ref|YP_006693318.1| ribosome recycling factor [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|404410612|ref|YP_006696200.1| ribosome recycling factor [Listeria monocytogenes SLCC5850]
gi|404413390|ref|YP_006698977.1| ribosome recycling factor [Listeria monocytogenes SLCC7179]
gi|405749656|ref|YP_006673122.1| ribosome recycling factor [Listeria monocytogenes ATCC 19117]
gi|405752531|ref|YP_006675996.1| ribosome recycling factor [Listeria monocytogenes SLCC2378]
gi|405755443|ref|YP_006678907.1| ribosome recycling factor [Listeria monocytogenes SLCC2540]
gi|405758361|ref|YP_006687637.1| ribosome recycling factor [Listeria monocytogenes SLCC2479]
gi|406704085|ref|YP_006754439.1| ribosome recycling factor [Listeria monocytogenes L312]
gi|417313769|ref|ZP_12100476.1| ribosome recycling factor [Listeria monocytogenes J1816]
gi|417317467|ref|ZP_12104084.1| ribosome recycling factor [Listeria monocytogenes J1-220]
gi|424714188|ref|YP_007014903.1| Ribosome-recycling factor [Listeria monocytogenes serotype 4b str.
LL195]
gi|424823077|ref|ZP_18248090.1| Ribosome-recycling factor [Listeria monocytogenes str. Scott A]
gi|22001941|sp|Q8Y7G7.1|RRF_LISMO RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|60390258|sp|Q720A8.1|RRF_LISMF RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|259494548|sp|C1L2M0.1|RRF_LISMC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|16410730|emb|CAC99392.1| frr [Listeria monocytogenes EGD-e]
gi|46880808|gb|AAT04106.1| ribosome recycling factor [Listeria monocytogenes serotype 4b str.
F2365]
gi|47014699|gb|EAL05655.1| ribosome recycling factor [Listeria monocytogenes str. 1/2a F6854]
gi|47017338|gb|EAL08166.1| ribosome recycling factor [Listeria monocytogenes str. 4b H7858]
gi|225876377|emb|CAS05086.1| Putative ribosome recycling factor [Listeria monocytogenes serotype
4b str. CLIP 80459]
gi|258601078|gb|EEW14403.1| ribosome recycling factor [Listeria monocytogenes FSL N3-165]
gi|258605951|gb|EEW18559.1| ribosome recycling factor [Listeria monocytogenes FSL R2-503]
gi|258608905|gb|EEW21513.1| ribosome recycling factor [Listeria monocytogenes F6900]
gi|284057261|gb|ADB68202.1| hypothetical protein LM5578_1453 [Listeria monocytogenes 08-5578]
gi|284060308|gb|ADB71247.1| hypothetical protein LM5923_1406 [Listeria monocytogenes 08-5923]
gi|293583927|gb|EFF95959.1| ribosome recycling factor [Listeria monocytogenes HPB2262]
gi|293589952|gb|EFF98286.1| ribosome recycling factor [Listeria monocytogenes J2818]
gi|293593865|gb|EFG01626.1| ribosome recycling factor [Listeria monocytogenes FSL J1-194]
gi|300513883|gb|EFK40948.1| ribosome recycling factor [Listeria monocytogenes FSL N1-017]
gi|328468599|gb|EGF39599.1| ribosome recycling factor [Listeria monocytogenes J1816]
gi|328475037|gb|EGF45825.1| ribosome recycling factor [Listeria monocytogenes J1-220]
gi|332311757|gb|EGJ24852.1| Ribosome-recycling factor [Listeria monocytogenes str. Scott A]
gi|345533957|gb|AEO03398.1| ribosome recycling factor [Listeria monocytogenes J0161]
gi|345536859|gb|AEO06299.1| ribosome recycling factor [Listeria monocytogenes 10403S]
gi|346424136|gb|AEO25661.1| ribosome recycling factor [Listeria monocytogenes FSL R2-561]
gi|346646218|gb|AEO38843.1| ribosome recycling factor [Listeria monocytogenes Finland 1998]
gi|384390810|gb|AFH79880.1| ribosome recycling factor [Listeria monocytogenes 07PF0776]
gi|404218856|emb|CBY70220.1| ribosome recycling factor [Listeria monocytogenes ATCC 19117]
gi|404221731|emb|CBY73094.1| ribosome recycling factor [Listeria monocytogenes SLCC2378]
gi|404224643|emb|CBY76005.1| ribosome recycling factor [Listeria monocytogenes SLCC2540]
gi|404227503|emb|CBY48908.1| ribosome recycling factor [Listeria monocytogenes SLCC2755]
gi|404230438|emb|CBY51842.1| ribosome recycling factor [Listeria monocytogenes SLCC5850]
gi|404233307|emb|CBY54710.1| ribosome recycling factor [Listeria monocytogenes SLCC2372]
gi|404236243|emb|CBY57645.1| ribosome recycling factor [Listeria monocytogenes SLCC2479]
gi|404239089|emb|CBY60490.1| ribosome recycling factor [Listeria monocytogenes SLCC7179]
gi|404245661|emb|CBY03886.1| ribosome recycling factor [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|406361115|emb|CBY67388.1| ribosome recycling factor [Listeria monocytogenes L312]
gi|424013372|emb|CCO63912.1| Ribosome-recycling factor [Listeria monocytogenes serotype 4b str.
LL195]
gi|441470985|emb|CCQ20740.1| Ribosome-recycling factor [Listeria monocytogenes]
gi|441474112|emb|CCQ23866.1| Ribosome-recycling factor [Listeria monocytogenes N53-1]
Length = 185
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 85/119 (71%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K +ME+ + ++R GR+N ++LD++ V+YYG+ + +A I+ P++ LLI P
Sbjct: 10 KEKMEKAEQALTRQLGTIRAGRANASLLDRLSVDYYGAATPVNQMASISVPEARMLLITP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
YDK+ L IEKAI+ SDLG+TPNNDG V+RL++PQLT ERRKEL K V K+AEE KV +
Sbjct: 70 YDKTILGEIEKAILKSDLGLTPNNDGSVLRLSIPQLTEERRKELVKEVKKEAEEAKVAV 128
>gi|291563192|emb|CBL42008.1| ribosome recycling factor [butyrate-producing bacterium SS3/4]
Length = 184
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 88/117 (75%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+ME++ID + + S+R GR+NP +LDKI+V+YYG+P ++ + I+ P++ +LIQP++
Sbjct: 11 KMEKSIDALLNEYASIRAGRANPHVLDKIKVDYYGTPTPIQQVGNISVPEARMILIQPWE 70
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
KS ++ IEKAI +S+LG+ P+NDG VIRL P+LT ERRKEL+K V K+ + KV +
Sbjct: 71 KSLIRPIEKAIQTSELGINPSNDGSVIRLVFPELTEERRKELAKDVKKKGDGAKVAI 127
>gi|313888244|ref|ZP_07821915.1| ribosome recycling factor [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312845647|gb|EFR33037.1| ribosome recycling factor [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 185
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/124 (48%), Positives = 91/124 (73%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
S ++K+ ++RM ++ID + + S+R GR+N ++LD+I V+YYG L +A ++ P++
Sbjct: 3 SDLKKNTESRMSKSIDSLTESLQSIRAGRANTSLLDRIYVDYYGQQSPLNQVASLSAPEA 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
L IQP+D + + IEKAI SDLG+TP+NDG++IRL +PQLT ERRK+L+K+V K AE
Sbjct: 63 RLLAIQPWDATLIPEIEKAIQKSDLGITPSNDGKIIRLVIPQLTEERRKDLTKLVGKYAE 122
Query: 214 EGKV 217
E KV
Sbjct: 123 EAKV 126
>gi|255029475|ref|ZP_05301426.1| ribosome recycling factor [Listeria monocytogenes LO28]
Length = 182
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 85/119 (71%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K +ME+ + ++R GR+N ++LD++ V+YYG+ + +A I+ P++ LLI P
Sbjct: 10 KEKMEKAEQALTRQLGTIRAGRANASLLDRLSVDYYGAATPVNQMASISVPEARMLLITP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
YDK+ L IEKAI+ SDLG+TPNNDG V+RL++PQLT ERRKEL K V K+AEE KV +
Sbjct: 70 YDKTILGEIEKAILKSDLGLTPNNDGSVLRLSIPQLTEERRKELVKEVKKEAEEAKVAV 128
>gi|229545182|ref|ZP_04433907.1| ribosome recycling factor [Enterococcus faecalis TX1322]
gi|229309727|gb|EEN75714.1| ribosome recycling factor [Enterococcus faecalis TX1322]
Length = 185
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 59/119 (49%), Positives = 85/119 (71%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K +M + + +R +R GR+N ++LD+I+VEYYG+P + +A IN P++ L+I P
Sbjct: 10 KEKMTKAEESLRRELGQIRAGRANASLLDRIQVEYYGAPTPVNQLASINIPEARVLMITP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
+DK+S+ IEKAI SD+G++P NDG VIRL +PQLT ERRKEL+K V K+AE KV +
Sbjct: 70 FDKNSIADIEKAIQMSDIGISPTNDGNVIRLVIPQLTEERRKELAKDVKKEAENSKVAV 128
>gi|398304227|ref|ZP_10507813.1| ribosome recycling factor [Bacillus vallismortis DV1-F-3]
Length = 185
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 59/119 (49%), Positives = 85/119 (71%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K +ME+ I + +VR GR+NP++LDK+ VEYYG+ L ++ IN P++ L++ P
Sbjct: 10 KEKMEKAIAAYQRELATVRAGRANPSLLDKVTVEYYGAQTPLNQLSSINVPEARMLVVTP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
YDK+++ IEKAI+ +DLG+TP +DG +IR+ +P LT ERRKEL KVV K AEE KV +
Sbjct: 70 YDKTAIGDIEKAILKADLGVTPTSDGNMIRIAIPALTEERRKELVKVVKKYAEEAKVAV 128
>gi|326204054|ref|ZP_08193915.1| ribosome recycling factor [Clostridium papyrosolvens DSM 2782]
gi|325985821|gb|EGD46656.1| ribosome recycling factor [Clostridium papyrosolvens DSM 2782]
Length = 185
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 88/122 (72%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K ++ +M++TI++++ N +R GR+NPA+LDK+ ++YYG+ ++ IA ++ P++ +L
Sbjct: 7 KPIEEKMKKTINVLKDNLAGIRAGRANPAILDKLTIDYYGAATPIQQIATVSVPEARVIL 66
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
IQP++ LK IEK I SD+G+ PNNDG+VIRL P LT ERRKEL+K K+ EE KV
Sbjct: 67 IQPWEAKLLKDIEKEIQKSDIGINPNNDGKVIRLVFPALTEERRKELTKQAKKEGEESKV 126
Query: 218 VM 219
+
Sbjct: 127 AI 128
>gi|29376892|ref|NP_816046.1| ribosome recycling factor [Enterococcus faecalis V583]
gi|227519884|ref|ZP_03949933.1| ribosome recycling factor [Enterococcus faecalis TX0104]
gi|227553929|ref|ZP_03983976.1| ribosome recycling factor [Enterococcus faecalis HH22]
gi|229549430|ref|ZP_04438155.1| ribosome recycling factor [Enterococcus faecalis ATCC 29200]
gi|255972134|ref|ZP_05422720.1| ribosome recycling factor [Enterococcus faecalis T1]
gi|255975201|ref|ZP_05425787.1| ribosome recycling factor [Enterococcus faecalis T2]
gi|256617047|ref|ZP_05473893.1| ribosome recycling factor [Enterococcus faecalis ATCC 4200]
gi|256763091|ref|ZP_05503671.1| ribosome recycling factor [Enterococcus faecalis T3]
gi|256853758|ref|ZP_05559123.1| ribosome recycling factor [Enterococcus faecalis T8]
gi|256956675|ref|ZP_05560846.1| ribosome recycling factor [Enterococcus faecalis DS5]
gi|256961308|ref|ZP_05565479.1| ribosome recycling factor [Enterococcus faecalis Merz96]
gi|256963564|ref|ZP_05567735.1| ribosome recycling factor [Enterococcus faecalis HIP11704]
gi|257079630|ref|ZP_05573991.1| ribosome recycling factor [Enterococcus faecalis JH1]
gi|257087429|ref|ZP_05581790.1| ribosome recycling factor [Enterococcus faecalis D6]
gi|257090589|ref|ZP_05584950.1| ribosome recycling factor [Enterococcus faecalis CH188]
gi|257416636|ref|ZP_05593630.1| ribosome recycling factor [Enterococcus faecalis ARO1/DG]
gi|257419852|ref|ZP_05596846.1| ribosome recycling factor [Enterococcus faecalis T11]
gi|257421959|ref|ZP_05598949.1| ribosome recycling factor [Enterococcus faecalis X98]
gi|293383593|ref|ZP_06629503.1| ribosome recycling factor [Enterococcus faecalis R712]
gi|293387294|ref|ZP_06631851.1| ribosome recycling factor [Enterococcus faecalis S613]
gi|294780910|ref|ZP_06746264.1| ribosome recycling factor [Enterococcus faecalis PC1.1]
gi|300861008|ref|ZP_07107095.1| ribosome recycling factor [Enterococcus faecalis TUSoD Ef11]
gi|307270847|ref|ZP_07552134.1| ribosome recycling factor [Enterococcus faecalis TX4248]
gi|307271503|ref|ZP_07552775.1| ribosome recycling factor [Enterococcus faecalis TX0855]
gi|307277169|ref|ZP_07558273.1| ribosome recycling factor [Enterococcus faecalis TX2134]
gi|307285820|ref|ZP_07565954.1| ribosome recycling factor [Enterococcus faecalis TX0860]
gi|307290551|ref|ZP_07570463.1| ribosome recycling factor [Enterococcus faecalis TX0411]
gi|312899827|ref|ZP_07759146.1| ribosome recycling factor [Enterococcus faecalis TX0470]
gi|312905119|ref|ZP_07764240.1| ribosome recycling factor [Enterococcus faecalis TX0635]
gi|312906143|ref|ZP_07765155.1| ribosome recycling factor [Enterococcus faecalis DAPTO 512]
gi|312909488|ref|ZP_07768343.1| ribosome recycling factor [Enterococcus faecalis DAPTO 516]
gi|312953477|ref|ZP_07772317.1| ribosome recycling factor [Enterococcus faecalis TX0102]
gi|384513794|ref|YP_005708887.1| ribosome recycling factor [Enterococcus faecalis OG1RF]
gi|384519254|ref|YP_005706559.1| ribosome recycling factor [Enterococcus faecalis 62]
gi|397700587|ref|YP_006538375.1| ribosome recycling factor [Enterococcus faecalis D32]
gi|421513057|ref|ZP_15959845.1| Ribosome recycling factor [Enterococcus faecalis ATCC 29212]
gi|422685119|ref|ZP_16743344.1| ribosome recycling factor [Enterococcus faecalis TX4000]
gi|422687902|ref|ZP_16746073.1| ribosome recycling factor [Enterococcus faecalis TX0630]
gi|422693234|ref|ZP_16751248.1| ribosome recycling factor [Enterococcus faecalis TX0031]
gi|422695903|ref|ZP_16753881.1| ribosome recycling factor [Enterococcus faecalis TX4244]
gi|422697825|ref|ZP_16755756.1| ribosome recycling factor [Enterococcus faecalis TX1346]
gi|422701365|ref|ZP_16759206.1| ribosome recycling factor [Enterococcus faecalis TX1342]
gi|422706973|ref|ZP_16764670.1| ribosome recycling factor [Enterococcus faecalis TX0043]
gi|422709902|ref|ZP_16767248.1| ribosome recycling factor [Enterococcus faecalis TX0027]
gi|422714941|ref|ZP_16771665.1| ribosome recycling factor [Enterococcus faecalis TX0309A]
gi|422717381|ref|ZP_16774066.1| ribosome recycling factor [Enterococcus faecalis TX0309B]
gi|422719850|ref|ZP_16776473.1| ribosome recycling factor [Enterococcus faecalis TX0017]
gi|422724769|ref|ZP_16781245.1| ribosome recycling factor [Enterococcus faecalis TX2137]
gi|422725973|ref|ZP_16782430.1| ribosome recycling factor [Enterococcus faecalis TX0312]
gi|422729562|ref|ZP_16785963.1| ribosome recycling factor [Enterococcus faecalis TX0012]
gi|422732324|ref|ZP_16788664.1| ribosome recycling factor [Enterococcus faecalis TX0645]
gi|422736801|ref|ZP_16793063.1| ribosome recycling factor [Enterococcus faecalis TX1341]
gi|422869078|ref|ZP_16915600.1| ribosome recycling factor [Enterococcus faecalis TX1467]
gi|424675685|ref|ZP_18112582.1| ribosome recycling factor [Enterococcus faecalis 599]
gi|424676241|ref|ZP_18113118.1| ribosome recycling factor [Enterococcus faecalis ERV103]
gi|424680583|ref|ZP_18117386.1| ribosome recycling factor [Enterococcus faecalis ERV116]
gi|424683126|ref|ZP_18119880.1| ribosome recycling factor [Enterococcus faecalis ERV129]
gi|424686668|ref|ZP_18123334.1| ribosome recycling factor [Enterococcus faecalis ERV25]
gi|424689567|ref|ZP_18126138.1| ribosome recycling factor [Enterococcus faecalis ERV31]
gi|424694073|ref|ZP_18130482.1| ribosome recycling factor [Enterococcus faecalis ERV37]
gi|424697652|ref|ZP_18133974.1| ribosome recycling factor [Enterococcus faecalis ERV41]
gi|424700149|ref|ZP_18136347.1| ribosome recycling factor [Enterococcus faecalis ERV62]
gi|424703009|ref|ZP_18139146.1| ribosome recycling factor [Enterococcus faecalis ERV63]
gi|424710164|ref|ZP_18143630.1| ribosome recycling factor [Enterococcus faecalis ERV65]
gi|424717877|ref|ZP_18147151.1| ribosome recycling factor [Enterococcus faecalis ERV68]
gi|424721101|ref|ZP_18150199.1| ribosome recycling factor [Enterococcus faecalis ERV72]
gi|424725042|ref|ZP_18153969.1| ribosome recycling factor [Enterococcus faecalis ERV73]
gi|424727278|ref|ZP_18155911.1| ribosome recycling factor [Enterococcus faecalis ERV81]
gi|424742066|ref|ZP_18170400.1| ribosome recycling factor [Enterococcus faecalis ERV85]
gi|424751198|ref|ZP_18179230.1| ribosome recycling factor [Enterococcus faecalis ERV93]
gi|428767605|ref|YP_007153716.1| ribosome-recycling factor [Enterococcus faecalis str. Symbioflor 1]
gi|430359653|ref|ZP_19425905.1| ribosome recycling factor [Enterococcus faecalis OG1X]
gi|430370074|ref|ZP_19428873.1| ribosome recycling factor [Enterococcus faecalis M7]
gi|34924912|sp|Q831V2.1|RRF_ENTFA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|29344357|gb|AAO82116.1| ribosome recycling factor [Enterococcus faecalis V583]
gi|227072678|gb|EEI10641.1| ribosome recycling factor [Enterococcus faecalis TX0104]
gi|227176915|gb|EEI57887.1| ribosome recycling factor [Enterococcus faecalis HH22]
gi|229305667|gb|EEN71663.1| ribosome recycling factor [Enterococcus faecalis ATCC 29200]
gi|255963152|gb|EET95628.1| ribosome recycling factor [Enterococcus faecalis T1]
gi|255968073|gb|EET98695.1| ribosome recycling factor [Enterococcus faecalis T2]
gi|256596574|gb|EEU15750.1| ribosome recycling factor [Enterococcus faecalis ATCC 4200]
gi|256684342|gb|EEU24037.1| ribosome recycling factor [Enterococcus faecalis T3]
gi|256710701|gb|EEU25744.1| ribosome recycling factor [Enterococcus faecalis T8]
gi|256947171|gb|EEU63803.1| ribosome recycling factor [Enterococcus faecalis DS5]
gi|256951804|gb|EEU68436.1| ribosome recycling factor [Enterococcus faecalis Merz96]
gi|256954060|gb|EEU70692.1| ribosome recycling factor [Enterococcus faecalis HIP11704]
gi|256987660|gb|EEU74962.1| ribosome recycling factor [Enterococcus faecalis JH1]
gi|256995459|gb|EEU82761.1| ribosome recycling factor [Enterococcus faecalis D6]
gi|256999401|gb|EEU85921.1| ribosome recycling factor [Enterococcus faecalis CH188]
gi|257158464|gb|EEU88424.1| ribosome recycling factor [Enterococcus faecalis ARO1/DG]
gi|257161680|gb|EEU91640.1| ribosome recycling factor [Enterococcus faecalis T11]
gi|257163783|gb|EEU93743.1| ribosome recycling factor [Enterococcus faecalis X98]
gi|291079105|gb|EFE16469.1| ribosome recycling factor [Enterococcus faecalis R712]
gi|291083331|gb|EFE20294.1| ribosome recycling factor [Enterococcus faecalis S613]
gi|294452036|gb|EFG20484.1| ribosome recycling factor [Enterococcus faecalis PC1.1]
gi|295113452|emb|CBL32089.1| ribosome recycling factor [Enterococcus sp. 7L76]
gi|300850047|gb|EFK77797.1| ribosome recycling factor [Enterococcus faecalis TUSoD Ef11]
gi|306498406|gb|EFM67911.1| ribosome recycling factor [Enterococcus faecalis TX0411]
gi|306502581|gb|EFM71848.1| ribosome recycling factor [Enterococcus faecalis TX0860]
gi|306506099|gb|EFM75265.1| ribosome recycling factor [Enterococcus faecalis TX2134]
gi|306511775|gb|EFM80773.1| ribosome recycling factor [Enterococcus faecalis TX0855]
gi|306512760|gb|EFM81405.1| ribosome recycling factor [Enterococcus faecalis TX4248]
gi|310627789|gb|EFQ11072.1| ribosome recycling factor [Enterococcus faecalis DAPTO 512]
gi|310628686|gb|EFQ11969.1| ribosome recycling factor [Enterococcus faecalis TX0102]
gi|310631509|gb|EFQ14792.1| ribosome recycling factor [Enterococcus faecalis TX0635]
gi|311290161|gb|EFQ68717.1| ribosome recycling factor [Enterococcus faecalis DAPTO 516]
gi|311293077|gb|EFQ71633.1| ribosome recycling factor [Enterococcus faecalis TX0470]
gi|315025416|gb|EFT37348.1| ribosome recycling factor [Enterococcus faecalis TX2137]
gi|315030225|gb|EFT42157.1| ribosome recycling factor [Enterococcus faecalis TX4000]
gi|315032889|gb|EFT44821.1| ribosome recycling factor [Enterococcus faecalis TX0017]
gi|315035626|gb|EFT47558.1| ribosome recycling factor [Enterococcus faecalis TX0027]
gi|315146673|gb|EFT90689.1| ribosome recycling factor [Enterococcus faecalis TX4244]
gi|315150163|gb|EFT94179.1| ribosome recycling factor [Enterococcus faecalis TX0012]
gi|315152144|gb|EFT96160.1| ribosome recycling factor [Enterococcus faecalis TX0031]
gi|315155331|gb|EFT99347.1| ribosome recycling factor [Enterococcus faecalis TX0043]
gi|315159093|gb|EFU03110.1| ribosome recycling factor [Enterococcus faecalis TX0312]
gi|315161686|gb|EFU05703.1| ribosome recycling factor [Enterococcus faecalis TX0645]
gi|315166409|gb|EFU10426.1| ribosome recycling factor [Enterococcus faecalis TX1341]
gi|315170306|gb|EFU14323.1| ribosome recycling factor [Enterococcus faecalis TX1342]
gi|315173660|gb|EFU17677.1| ribosome recycling factor [Enterococcus faecalis TX1346]
gi|315574370|gb|EFU86561.1| ribosome recycling factor [Enterococcus faecalis TX0309B]
gi|315579052|gb|EFU91243.1| ribosome recycling factor [Enterococcus faecalis TX0630]
gi|315580155|gb|EFU92346.1| ribosome recycling factor [Enterococcus faecalis TX0309A]
gi|323481387|gb|ADX80826.1| ribosome recycling factor [Enterococcus faecalis 62]
gi|327535683|gb|AEA94517.1| ribosome recycling factor [Enterococcus faecalis OG1RF]
gi|329572247|gb|EGG53907.1| ribosome recycling factor [Enterococcus faecalis TX1467]
gi|397337226|gb|AFO44898.1| ribosome recycling factor [Enterococcus faecalis D32]
gi|401673886|gb|EJS80256.1| Ribosome recycling factor [Enterococcus faecalis ATCC 29212]
gi|402350321|gb|EJU85225.1| ribosome recycling factor [Enterococcus faecalis 599]
gi|402353881|gb|EJU88703.1| ribosome recycling factor [Enterococcus faecalis ERV116]
gi|402357500|gb|EJU92207.1| ribosome recycling factor [Enterococcus faecalis ERV103]
gi|402365892|gb|EJV00306.1| ribosome recycling factor [Enterococcus faecalis ERV129]
gi|402367063|gb|EJV01414.1| ribosome recycling factor [Enterococcus faecalis ERV25]
gi|402367652|gb|EJV01991.1| ribosome recycling factor [Enterococcus faecalis ERV31]
gi|402371855|gb|EJV05999.1| ribosome recycling factor [Enterococcus faecalis ERV37]
gi|402374525|gb|EJV08541.1| ribosome recycling factor [Enterococcus faecalis ERV62]
gi|402375183|gb|EJV09175.1| ribosome recycling factor [Enterococcus faecalis ERV41]
gi|402383617|gb|EJV17212.1| ribosome recycling factor [Enterococcus faecalis ERV68]
gi|402383876|gb|EJV17455.1| ribosome recycling factor [Enterococcus faecalis ERV65]
gi|402385664|gb|EJV19196.1| ribosome recycling factor [Enterococcus faecalis ERV63]
gi|402392297|gb|EJV25561.1| ribosome recycling factor [Enterococcus faecalis ERV72]
gi|402392435|gb|EJV25696.1| ribosome recycling factor [Enterococcus faecalis ERV73]
gi|402397268|gb|EJV30296.1| ribosome recycling factor [Enterococcus faecalis ERV81]
gi|402401054|gb|EJV33854.1| ribosome recycling factor [Enterococcus faecalis ERV85]
gi|402405752|gb|EJV38336.1| ribosome recycling factor [Enterococcus faecalis ERV93]
gi|427185778|emb|CCO73002.1| ribosome-recycling factor [Enterococcus faecalis str. Symbioflor 1]
gi|429513277|gb|ELA02864.1| ribosome recycling factor [Enterococcus faecalis OG1X]
gi|429515623|gb|ELA05134.1| ribosome recycling factor [Enterococcus faecalis M7]
Length = 185
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 59/119 (49%), Positives = 85/119 (71%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K +M + + +R +R GR+N ++LD+I+VEYYG+P + +A IN P++ L+I P
Sbjct: 10 KEKMTKAEESLRRELGQIRAGRANASLLDRIQVEYYGAPTPVNQLASINIPEARVLMITP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
+DK+S+ IEKAI SD+G++P NDG VIRL +PQLT ERRKEL+K V K+AE KV +
Sbjct: 70 FDKNSIADIEKAIQMSDIGISPTNDGNVIRLVIPQLTEERRKELAKDVKKEAENSKVAV 128
>gi|339009412|ref|ZP_08641984.1| ribosome-recycling factor [Brevibacillus laterosporus LMG 15441]
gi|338773890|gb|EGP33421.1| ribosome-recycling factor [Brevibacillus laterosporus LMG 15441]
Length = 185
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 58/125 (46%), Positives = 88/125 (70%)
Query: 95 SIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSS 154
+I KD++ RM + I ++ + ++R GR+ PAMLDKI V+YYG+P + +A + P+
Sbjct: 4 NILKDMEDRMSKAIQTLKKDLATLRAGRATPAMLDKIMVDYYGTPTPINQLANVVAPEPR 63
Query: 155 SLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEE 214
L +QP+DK++LK I+KAI+ SD+G+TP NDG VIR+ +P LT ERR++L KV K E+
Sbjct: 64 MLQVQPWDKNALKDIDKAIMQSDIGLTPTNDGSVIRIAVPPLTEERRRDLVKVANKNGED 123
Query: 215 GKVVM 219
KV +
Sbjct: 124 AKVAI 128
>gi|291456894|ref|ZP_06596284.1| ribosome recycling factor [Bifidobacterium breve DSM 20213 = JCM
1192]
gi|384196898|ref|YP_005582642.1| ribosome recycling factor [Bifidobacterium breve ACS-071-V-Sch8b]
gi|417942136|ref|ZP_12585413.1| Ribosome-recycling factor (RRF) (Ribosome-releasing factor)
[Bifidobacterium breve CECT 7263]
gi|291382171|gb|EFE89689.1| ribosome recycling factor [Bifidobacterium breve DSM 20213 = JCM
1192]
gi|333109969|gb|AEF26985.1| ribosome recycling factor [Bifidobacterium breve ACS-071-V-Sch8b]
gi|376167521|gb|EHS86357.1| Ribosome-recycling factor (RRF) (Ribosome-releasing factor)
[Bifidobacterium breve CECT 7263]
Length = 183
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 87/119 (73%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K +M +T++ + NF +RTGR+NPA+L+ I V+YYG+P +K++A I P+ +L + P
Sbjct: 8 KEQMAKTVENTKENFAGIRTGRANPALLNGIVVDYYGAPTPIKAVASIGVPEPRTLSVTP 67
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
+D S ++EKAI +SDLG++PN DG VIRLT+P+LT +RRKE K+ +AE+GKV +
Sbjct: 68 FDASQAAAVEKAIRNSDLGVSPNRDGNVIRLTMPELTEDRRKEYVKLAKSKAEDGKVAV 126
>gi|257082024|ref|ZP_05576385.1| ribosome recycling factor [Enterococcus faecalis E1Sol]
gi|256990054|gb|EEU77356.1| ribosome recycling factor [Enterococcus faecalis E1Sol]
Length = 185
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 59/119 (49%), Positives = 85/119 (71%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K +M + + +R +R GR+N ++LD+I+VEYYG+P + +A IN P++ L+I P
Sbjct: 10 KEKMTKAEEGLRRELGQIRAGRANASLLDRIQVEYYGAPTPVNQLASINIPEARVLMITP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
+DK+S+ IEKAI SD+G++P NDG VIRL +PQLT ERRKEL+K V K+AE KV +
Sbjct: 70 FDKNSIADIEKAIQMSDIGISPTNDGNVIRLVIPQLTEERRKELAKDVKKEAENSKVAV 128
>gi|339479313|gb|ABE95781.1| Ribosome Recycling Factor (RRF) [Bifidobacterium breve UCC2003]
Length = 183
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 87/119 (73%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K +M +T++ + NF +RTGR+NPA+L+ I V+YYG+P +K++A I P+ +L + P
Sbjct: 8 KEQMAKTVENTKENFAGIRTGRANPALLNGIVVDYYGAPTPIKAVASIGVPEPRTLSVTP 67
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
+D S ++EKAI +SDLG++PN DG VIRLT+P+LT +RRKE K+ +AE+GKV +
Sbjct: 68 FDASQAAAVEKAIRNSDLGVSPNRDGNVIRLTMPELTEDRRKEYVKLAKSKAEDGKVAV 126
>gi|336117154|ref|YP_004571921.1| ribosome-recycling factor [Microlunatus phosphovorus NM-1]
gi|334684933|dbj|BAK34518.1| ribosome-recycling factor [Microlunatus phosphovorus NM-1]
Length = 185
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 82/115 (71%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M+ ++ + F ++RTGR++PAM K+ EYYG+P L+ +A PD+ +LI PYD
Sbjct: 12 KMDSAVEYAKEEFAAIRTGRAHPAMFAKLTAEYYGAPTPLQQLASFQVPDARMVLISPYD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
+SS+ +IEK+I SDLG+ P+NDG VIR+TLPQLT ERRKE K+ +AEE ++
Sbjct: 72 RSSMNAIEKSIRDSDLGVNPSNDGHVIRVTLPQLTEERRKEYIKLARHKAEEARI 126
>gi|160940991|ref|ZP_02088330.1| hypothetical protein CLOBOL_05885 [Clostridium bolteae ATCC
BAA-613]
gi|158436081|gb|EDP13848.1| hypothetical protein CLOBOL_05885 [Clostridium bolteae ATCC
BAA-613]
Length = 183
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 54/117 (46%), Positives = 89/117 (76%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M +T+D++ +++ ++R GR+NP +LDKI+V+YYG+P L+ + ++ P++ ++IQP++
Sbjct: 10 KMNKTLDVLLSDYGTIRAGRANPHVLDKIKVDYYGTPTPLQQVGNVSVPEARMIVIQPWE 69
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
KS LK IEKAI++S+LG+ P NDG IRL P++T ERRKE+SK V K+ + KV +
Sbjct: 70 KSLLKPIEKAILTSELGINPTNDGNCIRLVFPEMTEERRKEVSKDVKKKGDNAKVAL 126
>gi|258645593|ref|ZP_05733062.1| ribosome recycling factor [Dialister invisus DSM 15470]
gi|260402951|gb|EEW96498.1| ribosome recycling factor [Dialister invisus DSM 15470]
Length = 185
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 89/122 (72%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K + +M+++I +R F S+RTG+++P++LD++ V+YYGS + +A + P++ L+
Sbjct: 7 KHLSEKMDKSIQALRNEFTSIRTGQASPSLLDRVFVDYYGSKTPVTQVASVTVPEARMLV 66
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
+QP+DK LK IEKAI SDLG+ P NDG +IR+ +PQLT +RRK+L KVV K+AEE KV
Sbjct: 67 VQPWDKGILKDIEKAINMSDLGLVPMNDGNLIRMAIPQLTEQRRKDLVKVVNKKAEEAKV 126
Query: 218 VM 219
+
Sbjct: 127 AI 128
>gi|16800419|ref|NP_470687.1| ribosome recycling factor [Listeria innocua Clip11262]
gi|423100393|ref|ZP_17088100.1| ribosome recycling factor [Listeria innocua ATCC 33091]
gi|22001944|sp|Q92C40.1|RRF_LISIN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|16413824|emb|CAC96582.1| frr [Listeria innocua Clip11262]
gi|370793394|gb|EHN61232.1| ribosome recycling factor [Listeria innocua ATCC 33091]
Length = 185
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 85/119 (71%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K +ME+ + ++R GR+N ++LD++ V+YYG+ + +A I+ P++ LLI P
Sbjct: 10 KEKMEKAEQALTRQLGTIRAGRANASLLDRLTVDYYGAATPVNQMASISVPEARMLLITP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
YDK+ L IEKAI+ SDLG+TPNNDG V+RL++PQLT ERRKEL K V K+AEE KV +
Sbjct: 70 YDKTILGEIEKAILKSDLGLTPNNDGSVLRLSIPQLTEERRKELVKEVKKEAEEAKVAV 128
>gi|422415810|ref|ZP_16492767.1| ribosome recycling factor [Listeria innocua FSL J1-023]
gi|313623929|gb|EFR94035.1| ribosome recycling factor [Listeria innocua FSL J1-023]
Length = 185
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 85/119 (71%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K +ME+ + ++R GR+N ++LD++ V+YYG+ + +A I+ P++ LLI P
Sbjct: 10 KEKMEKAEQALTRQLGTIRAGRANASLLDRLTVDYYGAATPVNQMASISVPEARMLLITP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
YDK+ L IEKAI+ SDLG+TPNNDG V+RL++PQLT ERRKEL K V K+AEE KV +
Sbjct: 70 YDKTILGEIEKAILKSDLGLTPNNDGSVLRLSIPQLTEERRKELVKEVKKEAEEAKVAV 128
>gi|295396357|ref|ZP_06806523.1| ribosome recycling factor [Brevibacterium mcbrellneri ATCC 49030]
gi|294970797|gb|EFG46706.1| ribosome recycling factor [Brevibacterium mcbrellneri ATCC 49030]
Length = 185
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 57/124 (45%), Positives = 85/124 (68%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+ I K+ A+M+ I+ ++ F +VRTGR+NP + I VEYYG+P ++ +A P++
Sbjct: 3 NGILKEASAKMDGAIEATQSAFGNVRTGRANPGLFANIPVEYYGTPTPMQQLASFQVPEA 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
++LI PYD+ +L IE A+ +SD+G P NDG VIR+TLP+LT ERRKE K+V AE
Sbjct: 63 RTILITPYDRGALTDIENALRNSDIGANPANDGNVIRVTLPELTEERRKEYVKIVKGDAE 122
Query: 214 EGKV 217
EG++
Sbjct: 123 EGRI 126
>gi|403745584|ref|ZP_10954379.1| ribosome recycling factor [Alicyclobacillus hesperidum URH17-3-68]
gi|403121302|gb|EJY55616.1| ribosome recycling factor [Alicyclobacillus hesperidum URH17-3-68]
Length = 185
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/121 (52%), Positives = 86/121 (71%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+V+ RM++ + +R F SVR GR+ PAMLDK+ V+YYGS + + +A + TP+ L+I
Sbjct: 8 NVQERMDKAVQNLRREFASVRAGRATPAMLDKVLVDYYGSQMPVNQVASVTTPEPRLLVI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
P++KS L IEKAI SDLG+ P+NDG VIRLT+P LT ERR+EL K V K AEE +V
Sbjct: 68 SPWEKSMLSEIEKAIQKSDLGLNPSNDGTVIRLTVPALTEERRQELVKQVRKLAEEARVA 127
Query: 219 M 219
+
Sbjct: 128 I 128
>gi|239626444|ref|ZP_04669475.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239516590|gb|EEQ56456.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 183
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 54/117 (46%), Positives = 89/117 (76%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M +T+D++ ++F ++R GR+NP +LDK++V+YYG+P L+ + ++ P++ ++IQP++
Sbjct: 10 KMNKTLDVLLSDFGTIRAGRANPHVLDKLKVDYYGTPTPLQQVGNVSVPEARMIVIQPWE 69
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
KS LK IEKAI++S+LG+ P NDG IRL P++T +RRKE+SK V K+ E KV +
Sbjct: 70 KSLLKPIEKAILTSELGINPTNDGNCIRLVFPEMTEDRRKEVSKDVKKKGEGAKVAL 126
>gi|358066937|ref|ZP_09153423.1| ribosome-recycling factor [Johnsonella ignava ATCC 51276]
gi|356694786|gb|EHI56441.1| ribosome-recycling factor [Johnsonella ignava ATCC 51276]
Length = 184
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 87/122 (71%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K+ + +ME+TI +++ + ++R GR+NP +LDKI+V YYG+P ++ + I+ P++ ++
Sbjct: 6 KEFQEKMEKTISVLQGEYATIRAGRANPHVLDKIKVNYYGTPTPIQQVGNISVPEARVMV 65
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
IQP++K LK IEKA+ SDLG+ P NDG VIRL P+LT ERRKEL K + K+ E KV
Sbjct: 66 IQPWEKGLLKEIEKAVNMSDLGIHPTNDGNVIRLVFPELTEERRKELVKDIKKKGEAAKV 125
Query: 218 VM 219
+
Sbjct: 126 AV 127
>gi|296330867|ref|ZP_06873342.1| ribosome recycling factor [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305674385|ref|YP_003866057.1| ribosome recycling factor [Bacillus subtilis subsp. spizizenii str.
W23]
gi|350265967|ref|YP_004877274.1| ribosome recycling factor [Bacillus subtilis subsp. spizizenii
TU-B-10]
gi|296151872|gb|EFG92746.1| ribosome recycling factor [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305412629|gb|ADM37748.1| ribosome recycling factor [Bacillus subtilis subsp. spizizenii str.
W23]
gi|349598854|gb|AEP86642.1| ribosome recycling factor [Bacillus subtilis subsp. spizizenii
TU-B-10]
Length = 185
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 59/119 (49%), Positives = 85/119 (71%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K +ME+ I + +VR GR+NP++LDK+ VEYYG+ L ++ IN P++ L++ P
Sbjct: 10 KEKMEKAIAAYQRELATVRAGRANPSLLDKVTVEYYGAQTPLNQLSSINVPEARMLVVTP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
YDKS++ IEKAI+ +DLG+TP +DG +IR+ +P LT ERRKEL KVV K AE+ KV +
Sbjct: 70 YDKSAIGDIEKAILKADLGITPTSDGNMIRIAIPALTEERRKELVKVVKKYAEDAKVAV 128
>gi|422412781|ref|ZP_16489740.1| ribosome recycling factor, partial [Listeria innocua FSL S4-378]
gi|313619142|gb|EFR90928.1| ribosome recycling factor [Listeria innocua FSL S4-378]
Length = 176
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 85/119 (71%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K +ME+ + ++R GR+N ++LD++ V+YYG+ + +A I+ P++ LLI P
Sbjct: 1 KEKMEKAEQALTRQLGTIRAGRANASLLDRLTVDYYGAATPVNQMASISVPEARMLLITP 60
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
YDK+ L IEKAI+ SDLG+TPNNDG V+RL++PQLT ERRKEL K V K+AEE KV +
Sbjct: 61 YDKTILGEIEKAILKSDLGLTPNNDGSVLRLSIPQLTEERRKELVKEVKKEAEEAKVAV 119
>gi|435853435|ref|YP_007314754.1| ribosome recycling factor [Halobacteroides halobius DSM 5150]
gi|433669846|gb|AGB40661.1| ribosome recycling factor [Halobacteroides halobius DSM 5150]
Length = 185
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 89/121 (73%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + +ME ++ + NF +RTGR+ P++++ I+ EYYG L +AQI+ P++ L+I
Sbjct: 8 DTRKKMEEVLESIEGNFAKIRTGRARPSLVEDIKAEYYGQVTPLNQMAQISVPEARQLVI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
PYD ++L+ IEKAI+ SDL +TPN DG++IR+ +P+LT ERRK+L+K+ ++AEEG++
Sbjct: 68 NPYDNNALEDIEKAILKSDLDLTPNTDGDLIRINIPELTEERRKKLAKLADEKAEEGRIA 127
Query: 219 M 219
+
Sbjct: 128 I 128
>gi|421872765|ref|ZP_16304382.1| ribosome recycling factor [Brevibacillus laterosporus GI-9]
gi|372458180|emb|CCF13931.1| ribosome recycling factor [Brevibacillus laterosporus GI-9]
Length = 185
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 58/125 (46%), Positives = 88/125 (70%)
Query: 95 SIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSS 154
+I KD++ RM + I ++ + ++R GR+ PAMLDKI V+YYG+P + +A + P+
Sbjct: 4 NILKDMEDRMSKAIQTLKKDLATLRAGRATPAMLDKIMVDYYGTPTPINQLANVVAPEPR 63
Query: 155 SLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEE 214
L +QP+DK++LK I+KAI+ SD+G+TP NDG VIR+ +P LT ERR++L KV K E+
Sbjct: 64 MLQVQPWDKNALKDIDKAIMQSDIGLTPTNDGSVIRIAVPPLTEERRRDLVKVANKSGED 123
Query: 215 GKVVM 219
KV +
Sbjct: 124 AKVAI 128
>gi|348027044|ref|YP_004766849.1| ribosome-recycling factor [Megasphaera elsdenii DSM 20460]
gi|341823098|emb|CCC74022.1| ribosome-recycling factor [Megasphaera elsdenii DSM 20460]
Length = 186
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 89/117 (76%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M++TI+ ++ +S+RTGR++ ++LD+I V+YYG+P +K +A ++ P+ + I P++
Sbjct: 13 KMDKTIEALKRELSSIRTGRASTSLLDRITVDYYGTPTPVKQVANVSVPEPRMITIAPWE 72
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
L IEKAI+ SDLG+ PNNDG++IRL +PQLT ERRKELSK V+K AE+ KVV+
Sbjct: 73 PKMLGEIEKAILKSDLGLNPNNDGKIIRLEIPQLTEERRKELSKKVSKIAEDSKVVI 129
>gi|56419787|ref|YP_147105.1| ribosome recycling factor [Geobacillus kaustophilus HTA426]
gi|297530573|ref|YP_003671848.1| ribosome recycling factor [Geobacillus sp. C56-T3]
gi|319766267|ref|YP_004131768.1| ribosome recycling factor [Geobacillus sp. Y412MC52]
gi|375008224|ref|YP_004981857.1| ribosome-recycling factor [Geobacillus thermoleovorans CCB_US3_UF5]
gi|448237408|ref|YP_007401466.1| ribosome recycling factor [Geobacillus sp. GHH01]
gi|60390228|sp|Q5L0J9.1|RRF_GEOKA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|56379629|dbj|BAD75537.1| ribosome recycling factor [Geobacillus kaustophilus HTA426]
gi|297253825|gb|ADI27271.1| ribosome recycling factor [Geobacillus sp. C56-T3]
gi|317111133|gb|ADU93625.1| ribosome recycling factor [Geobacillus sp. Y412MC52]
gi|359287073|gb|AEV18757.1| Ribosome-recycling factor [Geobacillus thermoleovorans CCB_US3_UF5]
gi|445206250|gb|AGE21715.1| ribosome recycling factor [Geobacillus sp. GHH01]
Length = 185
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 87/119 (73%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K +M++ + S+R GR+N +L+K+ V+YYG P + +A I+ P++ L+IQP
Sbjct: 10 KEKMDKAVQAFTRELASIRAGRANAGLLEKVTVDYYGVPTPINQLASISVPEARLLVIQP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
YDKS++K +EKAI++SDLG+TP+NDG VIRL +P LT ERR+EL+K+V K +E+ KV +
Sbjct: 70 YDKSAIKEMEKAILASDLGLTPSNDGSVIRLVIPPLTEERRRELAKLVKKYSEDAKVAV 128
>gi|355670191|ref|ZP_09057046.1| ribosome-recycling factor [Clostridium citroniae WAL-17108]
gi|354816263|gb|EHF00851.1| ribosome-recycling factor [Clostridium citroniae WAL-17108]
Length = 183
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 55/117 (47%), Positives = 88/117 (75%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M +T+D++ ++F ++R GR+NP +LDKI+V+YYG+P L+ + ++ P++ ++IQP++
Sbjct: 10 KMNKTLDVLLSDFGTIRAGRANPHVLDKIKVDYYGTPTPLQQVGNVSVPEARMIVIQPWE 69
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
KS LK IEKAI++S+LG+ P NDG IRL P++T ERRK +SK V K+ E KV +
Sbjct: 70 KSLLKPIEKAILTSELGINPTNDGNCIRLVFPEMTEERRKAVSKDVKKKGEGAKVAL 126
>gi|384201446|ref|YP_005587193.1| ribosome recycling factor [Bifidobacterium longum subsp. longum
KACC 91563]
gi|338754453|gb|AEI97442.1| ribosome recycling factor [Bifidobacterium longum subsp. longum
KACC 91563]
Length = 183
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 88/119 (73%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K +M +T++ + NF+ +RTGR+NPA+L+ I V+YYG+P +K++A I P+ +L + P
Sbjct: 8 KEQMAKTVENTKENFSGIRTGRANPALLNGITVDYYGAPTPIKAVASIGVPEPRTLSVTP 67
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
+D S ++EKA+ +SDLG++PN DG VIRLT+P+LT +RRKE K+ +AE+GKV +
Sbjct: 68 FDVSQAGAVEKALRNSDLGISPNRDGNVIRLTMPELTEDRRKEYVKLAKGKAEDGKVAV 126
>gi|269837765|ref|YP_003319993.1| ribosome recycling factor [Sphaerobacter thermophilus DSM 20745]
gi|269787028|gb|ACZ39171.1| ribosome recycling factor [Sphaerobacter thermophilus DSM 20745]
Length = 185
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 89/121 (73%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + RM +T+D ++ +RTGR++P +++++EV+YYG+P L +A I+ P+ L++
Sbjct: 8 DAEGRMTKTLDNLQRELAGIRTGRASPGLIERLEVDYYGTPTPLNQVAGISAPEPRLLVV 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QP+D+S++ +IEKAI SSDLG+ P NDG+VIR+ +P LT ERRK L +VV ++ EE +V
Sbjct: 68 QPWDRSAMSAIEKAIRSSDLGLNPTNDGQVIRIAIPPLTEERRKALVRVVRQKVEESRVA 127
Query: 219 M 219
+
Sbjct: 128 I 128
>gi|168184638|ref|ZP_02619302.1| ribosome recycling factor [Clostridium botulinum Bf]
gi|170756757|ref|YP_001781975.1| ribosome recycling factor [Clostridium botulinum B1 str. Okra]
gi|226949785|ref|YP_002804876.1| ribosome recycling factor [Clostridium botulinum A2 str. Kyoto]
gi|237795867|ref|YP_002863419.1| ribosome recycling factor [Clostridium botulinum Ba4 str. 657]
gi|387818654|ref|YP_005679001.1| ribosome recycling factor [Clostridium botulinum H04402 065]
gi|229564223|sp|B1II63.1|RRF_CLOBK RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|254809503|sp|C1FSK2.1|RRF_CLOBJ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|259494535|sp|C3L0C9.1|RRF_CLOB6 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|169121969|gb|ACA45805.1| ribosome recycling factor [Clostridium botulinum B1 str. Okra]
gi|182672259|gb|EDT84220.1| ribosome recycling factor [Clostridium botulinum Bf]
gi|226841674|gb|ACO84340.1| ribosome recycling factor [Clostridium botulinum A2 str. Kyoto]
gi|229263177|gb|ACQ54210.1| ribosome recycling factor [Clostridium botulinum Ba4 str. 657]
gi|322806698|emb|CBZ04267.1| ribosome recycling factor [Clostridium botulinum H04402 065]
Length = 184
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 83/117 (70%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M +TI ++ S++ GR+NPAMLD+IE EYYGS L + I+ P++ LLIQP+D
Sbjct: 12 KMGKTIVALKRELASMKAGRANPAMLDRIEAEYYGSMTPLNQLGNISVPEARVLLIQPWD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
KS+L +IEKAI+ SDLG+ P+NDG VIRL +P+LT E RK + K V K EE KV +
Sbjct: 72 KSALSAIEKAILKSDLGLNPSNDGTVIRLVIPELTEETRKNIVKTVKKTGEEAKVAI 128
>gi|295110296|emb|CBL24249.1| ribosome recycling factor [Ruminococcus obeum A2-162]
Length = 183
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 59/117 (50%), Positives = 85/117 (72%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M +T++ ++R GR+NP +LDKI V+YYGSP L+ +A I P++ + IQP++
Sbjct: 11 KMTKTLNGFEEELTTIRAGRANPHILDKITVDYYGSPTPLQQVANITVPEARMIQIQPWE 70
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
S +KSIEKAI++SDLG+ P+NDG++IRL LP+LT ERRKEL K V K+ E KV +
Sbjct: 71 SSLIKSIEKAILTSDLGLNPSNDGKLIRLVLPELTEERRKELVKDVKKKGEAAKVAV 127
>gi|187778975|ref|ZP_02995448.1| hypothetical protein CLOSPO_02570 [Clostridium sporogenes ATCC
15579]
gi|424827570|ref|ZP_18252357.1| ribosome recycling factor [Clostridium sporogenes PA 3679]
gi|187772600|gb|EDU36402.1| ribosome recycling factor [Clostridium sporogenes ATCC 15579]
gi|365980010|gb|EHN16051.1| ribosome recycling factor [Clostridium sporogenes PA 3679]
Length = 184
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 83/117 (70%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M +TI ++ S++ GR+NPAMLD+IE EYYGS L + I+ P++ LLIQP+D
Sbjct: 12 KMGKTIVALKRELASMKAGRANPAMLDRIEAEYYGSMTPLNQLGNISVPEARVLLIQPWD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
KS+L +IEKAI+ SDLG+ P+NDG VIRL +P+LT E RK + K V K EE KV +
Sbjct: 72 KSALSAIEKAILKSDLGLNPSNDGTVIRLVIPELTEETRKNIVKTVKKTGEEAKVAI 128
>gi|404370933|ref|ZP_10976248.1| ribosome-recycling factor [Clostridium sp. 7_2_43FAA]
gi|226912945|gb|EEH98146.1| ribosome-recycling factor [Clostridium sp. 7_2_43FAA]
Length = 185
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 88/117 (75%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M++TI +++++ +++R GR+NP MLD+I+V+YYGSP L +A I+ P+ L+I P++
Sbjct: 12 KMKKTISVLKSDLSTMRAGRANPTMLDRIQVDYYGSPCPLNQVANISAPEPRVLVISPWE 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
KS +K IEKAI++SDLG+ P+NDG VIRL +P+LT E R+ L K V K EE KV +
Sbjct: 72 KSLMKEIEKAILTSDLGINPSNDGSVIRLVVPELTEETRRNLVKNVKKTGEEAKVAL 128
>gi|261419452|ref|YP_003253134.1| ribosome recycling factor [Geobacillus sp. Y412MC61]
gi|261375909|gb|ACX78652.1| ribosome recycling factor [Geobacillus sp. Y412MC61]
Length = 186
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 87/119 (73%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K +M++ + S+R GR+N +L+K+ V+YYG P + +A I+ P++ L+IQP
Sbjct: 11 KEKMDKAVQAFTRELASIRAGRANAGLLEKVTVDYYGVPTPINQLASISVPEARLLVIQP 70
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
YDKS++K +EKAI++SDLG+TP+NDG VIRL +P LT ERR+EL+K+V K +E+ KV +
Sbjct: 71 YDKSAIKEMEKAILASDLGLTPSNDGSVIRLVIPPLTEERRRELAKLVKKYSEDAKVAV 129
>gi|261337802|ref|ZP_05965686.1| ribosome recycling factor [Bifidobacterium gallicum DSM 20093]
gi|270277256|gb|EFA23110.1| ribosome recycling factor [Bifidobacterium gallicum DSM 20093]
Length = 184
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 58/119 (48%), Positives = 85/119 (71%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K +M +T++ + NF+ +RTGR+NPA+L+ I V+YYG+P LK++A I P+ +L I P
Sbjct: 9 KDQMAKTVESTKENFSGIRTGRANPALLNGIVVDYYGAPTPLKAVATIGVPEPRTLSITP 68
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
+D S ++EKA+ SDLG +P DG VIRLT+P+LT ERRKE K+ +AE+GKV +
Sbjct: 69 FDASQTNAVEKALRDSDLGASPRRDGNVIRLTMPELTGERRKEYVKLAKTKAEDGKVAV 127
>gi|407474023|ref|YP_006788423.1| ribosome recycling factor Frr [Clostridium acidurici 9a]
gi|407050531|gb|AFS78576.1| ribosome recycling factor Frr [Clostridium acidurici 9a]
Length = 185
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/127 (48%), Positives = 87/127 (68%)
Query: 93 KSSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPD 152
K I +++K +M++TI+ + VR GR+NP +LD+I VEYYG+ L IA I+ P+
Sbjct: 2 KLEIHEEIKEKMQKTINSCADELSGVRAGRANPTLLDRITVEYYGAQTPLNQIANISAPE 61
Query: 153 SSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQA 212
L+IQP+D S L IEK+I+ SDLG+ P NDG+++RL +PQLT ERR EL+KVV K
Sbjct: 62 PRMLVIQPWDASILGEIEKSILKSDLGLNPTNDGKILRLMIPQLTEERRVELTKVVKKIG 121
Query: 213 EEGKVVM 219
E K+ +
Sbjct: 122 ENSKIAI 128
>gi|168335176|ref|ZP_02693282.1| ribosome recycling factor [Epulopiscium sp. 'N.t. morphotype B']
Length = 180
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 87/122 (71%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K + +ME++I ++ +FN++R GR+NP +LDKI V+YYG+ +K + I P++ L
Sbjct: 2 KKFEDKMEKSILSLKEDFNTIRAGRANPNVLDKIVVDYYGTLTPIKQVGNIVVPEARILQ 61
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
IQP+D S LK IEKAI SD+G+ P+NDG+VIRL P+LT ERRKEL+K + K+ E KV
Sbjct: 62 IQPWDSSLLKGIEKAINESDIGINPSNDGKVIRLVFPELTQERRKELTKEIKKKGENAKV 121
Query: 218 VM 219
+
Sbjct: 122 AI 123
>gi|116514309|ref|YP_813215.1| ribosome recycling factor [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|122274959|sp|Q049U5.1|RRF_LACDB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|116093624|gb|ABJ58777.1| ribosome recycling factor [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
Length = 185
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/119 (51%), Positives = 85/119 (71%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K M ++I++ ++N +VR G +N ++LD++ VEYYG P L +A I P+ L+I P
Sbjct: 10 KRNMNKSIEVYQSNLATVRAGVANASLLDRVMVEYYGVPTPLVQMAGITIPEPRVLMITP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
YDKSSL IE AI++SDLG+TP NDG VIRL +PQLT ERR+E++K V K AEE K+ +
Sbjct: 70 YDKSSLNDIEHAILASDLGLTPANDGNVIRLIIPQLTGERRQEIAKEVGKLAEEAKIAV 128
>gi|269977913|ref|ZP_06184867.1| ribosome recycling factor [Mobiluncus mulieris 28-1]
gi|306819219|ref|ZP_07452930.1| ribosome recycling factor [Mobiluncus mulieris ATCC 35239]
gi|307700228|ref|ZP_07637269.1| ribosome recycling factor [Mobiluncus mulieris FB024-16]
gi|269933879|gb|EEZ90459.1| ribosome recycling factor [Mobiluncus mulieris 28-1]
gi|304648001|gb|EFM45315.1| ribosome recycling factor [Mobiluncus mulieris ATCC 35239]
gi|307614610|gb|EFN93838.1| ribosome recycling factor [Mobiluncus mulieris FB024-16]
Length = 185
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 58/124 (46%), Positives = 85/124 (68%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
I KD K +M++ ++ + F ++RTGR+N AM D I VEYYGSP LK +A N P++
Sbjct: 3 DGILKDTKTKMQKAVEATKDEFATIRTGRANAAMFDGIVVEYYGSPTPLKQLASFNIPEA 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
+++IQP+D+++ + I AI SDLG+TP +DG+ IR+ LP LT +RRKE K +AE
Sbjct: 63 RTVIIQPFDRNATQDIIHAISESDLGVTPTDDGKTIRVVLPALTEDRRKEYVKQAKTKAE 122
Query: 214 EGKV 217
EG+V
Sbjct: 123 EGRV 126
>gi|289434595|ref|YP_003464467.1| hypothetical protein lse_1230 [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|422421972|ref|ZP_16498925.1| ribosome recycling factor [Listeria seeligeri FSL S4-171]
gi|289170839|emb|CBH27381.1| frr [Listeria seeligeri serovar 1/2b str. SLCC3954]
gi|313638109|gb|EFS03374.1| ribosome recycling factor [Listeria seeligeri FSL S4-171]
Length = 185
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 85/119 (71%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K +ME+ + ++R GR+N ++LD++ V+YYG+ + +A I+ P++ LLI P
Sbjct: 10 KEKMEKAEQALTRQLGTIRAGRANASLLDRLTVDYYGAATPVNQMASISIPEARMLLITP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
YDK+ L IEKAI+ SDLG+TPNNDG V+RL++PQLT ERRKEL K V K+AEE KV +
Sbjct: 70 YDKTILGEIEKAILKSDLGLTPNNDGSVLRLSIPQLTEERRKELVKEVKKEAEEAKVAV 128
>gi|422843955|ref|ZP_16890665.1| ribosome recycling factor [Lactobacillus delbrueckii subsp. lactis
DSM 20072]
gi|325685953|gb|EGD28016.1| ribosome recycling factor [Lactobacillus delbrueckii subsp. lactis
DSM 20072]
Length = 185
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 86/119 (72%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K+ M ++I++ ++N +VR G +N ++LD++ VEYYG P L +A I P+ L+I P
Sbjct: 10 KSNMNKSIEVYQSNLATVRAGVANASLLDRVMVEYYGVPTPLVQMAGITIPEPRVLVITP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
YDK+SL IE AI++SDLG+TP NDG VIRL +PQLT ERR+E++K V K AEE K+ +
Sbjct: 70 YDKTSLNDIEHAILASDLGLTPANDGNVIRLVIPQLTGERRQEIAKEVGKLAEEAKIAV 128
>gi|83589883|ref|YP_429892.1| ribosome recycling factor [Moorella thermoacetica ATCC 39073]
gi|123524654|sp|Q2RJP0.1|RRF_MOOTA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|83572797|gb|ABC19349.1| ribosome recycling factor [Moorella thermoacetica ATCC 39073]
Length = 185
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 58/126 (46%), Positives = 95/126 (75%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+ I ++ + +M++ ++ +R S+R GR+NPA+L+K+ V YYG+P + +A +++P++
Sbjct: 3 ADILQEAEEKMKKAVEGLRRELASLRAGRANPALLEKVLVSYYGTPTPVNQLATVSSPEA 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
L+IQP+D++ L IEKAI+ SDLG+TP++DG VIR+T+PQLT ERR EL KV K+AE
Sbjct: 63 RLLVIQPWDRNILPEIEKAILKSDLGLTPSSDGTVIRITIPQLTEERRSELVKVARKKAE 122
Query: 214 EGKVVM 219
E +V++
Sbjct: 123 EFRVMV 128
>gi|313124038|ref|YP_004034297.1| ribosome-recycling factor [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|312280601|gb|ADQ61320.1| Ribosome-recycling factor [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
Length = 185
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 86/119 (72%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K+ M ++I++ ++N +VR G +N ++LD++ VEYYG P L +A I P+ L+I P
Sbjct: 10 KSNMNKSIEVYQSNLATVRAGVANASLLDRVMVEYYGVPTPLVQMAGITIPEPRVLVITP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
YDK+SL IE AI++SDLG+TP NDG VIRL +PQLT ERR+E++K V K AEE K+ +
Sbjct: 70 YDKTSLNDIEHAILASDLGLTPANDGNVIRLVIPQLTGERRQEIAKEVGKLAEEAKIAV 128
>gi|289706653|ref|ZP_06503001.1| ribosome recycling factor [Micrococcus luteus SK58]
gi|289556573|gb|EFD49916.1| ribosome recycling factor [Micrococcus luteus SK58]
Length = 185
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 58/115 (50%), Positives = 87/115 (75%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M+RTI+ R +F SVRTGR+NP + K+ V+YYGS L+ +A T D+ +LLI P+D
Sbjct: 12 QMDRTIEATREDFASVRTGRANPGLYSKVMVDYYGSFTPLQQLASFTTTDARTLLITPFD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
+S+L++IEKA+ S++G P+NDG+VIR+ +P+LT+ERRKE K+V +AEE K+
Sbjct: 72 QSALRNIEKALSESEVGANPSNDGKVIRIVMPELTAERRKEYVKLVKSKAEEHKI 126
>gi|257084575|ref|ZP_05578936.1| ribosome recycling factor [Enterococcus faecalis Fly1]
gi|307287723|ref|ZP_07567766.1| ribosome recycling factor [Enterococcus faecalis TX0109]
gi|422703701|ref|ZP_16761521.1| ribosome recycling factor [Enterococcus faecalis TX1302]
gi|256992605|gb|EEU79907.1| ribosome recycling factor [Enterococcus faecalis Fly1]
gi|306501461|gb|EFM70764.1| ribosome recycling factor [Enterococcus faecalis TX0109]
gi|315164822|gb|EFU08839.1| ribosome recycling factor [Enterococcus faecalis TX1302]
Length = 185
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 58/119 (48%), Positives = 85/119 (71%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K +M + + +R +R GR+N ++LD+I+VEYYG+P + +A IN P++ L+I P
Sbjct: 10 KEKMTKAEESLRRELGQIRAGRANASLLDRIQVEYYGAPTPVNQLASINIPEARVLMITP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
+DK+S+ IEKAI SD+G++P NDG VIRL +PQLT ERRKEL+K V K+AE K+ +
Sbjct: 70 FDKNSIADIEKAIQMSDIGISPTNDGNVIRLVIPQLTEERRKELAKDVKKEAENSKIAV 128
>gi|304439992|ref|ZP_07399885.1| ribosome recycling factor [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304371484|gb|EFM25097.1| ribosome recycling factor [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 184
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 89/117 (76%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M+++I++++ + S+R GR+NPA+LDKI VEYYG L +A I+ P++ L++QP+D
Sbjct: 11 KMKKSIEVLKDDLLSIRAGRANPALLDKITVEYYGQVTPLNQVAGISAPEARLLVVQPWD 70
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
+S + IEK I+ SDLG+ P+NDG+V+RL +PQLT ERR++L+K+V K E+ KV +
Sbjct: 71 QSLISVIEKEILKSDLGLNPSNDGKVVRLIIPQLTEERRRDLTKIVKKNGEDTKVAI 127
>gi|444432099|ref|ZP_21227258.1| ribosome-recycling factor [Gordonia soli NBRC 108243]
gi|443886928|dbj|GAC68979.1| ribosome-recycling factor [Gordonia soli NBRC 108243]
Length = 185
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 85/119 (71%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + +ME+ + + R + S+RTGR+NPAM +K+ +EYYG+ + +A INTP++ ++I
Sbjct: 8 DAEEKMEKAVGVARDDMGSIRTGRANPAMFNKVHIEYYGALTPITQVASINTPEARLVVI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
+PY+ SSL+ IE AI +SDLG+ P NDG +IR+ +PQLT +RRKEL K + E+ KV
Sbjct: 68 KPYEASSLRDIETAIRNSDLGVNPTNDGTIIRVAIPQLTEDRRKELVKQAKSKGEDAKV 126
>gi|424760598|ref|ZP_18188210.1| ribosome recycling factor [Enterococcus faecalis R508]
gi|402403291|gb|EJV35970.1| ribosome recycling factor [Enterococcus faecalis R508]
Length = 185
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 58/119 (48%), Positives = 85/119 (71%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K +M + + +R +R GR+N ++LD+I+VEYYG+P + +A IN P++ L+I P
Sbjct: 10 KEKMTKAEESLRRELGQIRAGRANASLLDRIQVEYYGAPTPVNQLASINIPEARVLMITP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
+DK+S+ IEKAI SD+G++P NDG V+RL +PQLT ERRKEL+K V K+AE KV +
Sbjct: 70 FDKNSIADIEKAIQMSDIGISPTNDGNVVRLVIPQLTEERRKELAKDVKKEAENSKVAV 128
>gi|227875940|ref|ZP_03994063.1| ribosome recycling factor [Mobiluncus mulieris ATCC 35243]
gi|227843472|gb|EEJ53658.1| ribosome recycling factor [Mobiluncus mulieris ATCC 35243]
Length = 185
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 58/124 (46%), Positives = 85/124 (68%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
I KD K +M++ ++ + F ++RTGR+N AM D I VEYYGSP LK +A N P++
Sbjct: 3 DEILKDTKTKMQKAVEATKDEFATIRTGRANAAMFDGIVVEYYGSPTPLKQLASFNIPEA 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
+++IQP+D+++ + I AI SDLG+TP +DG+ IR+ LP LT +RRKE K +AE
Sbjct: 63 RTVIIQPFDRNATQDIIHAISESDLGVTPTDDGKTIRVVLPALTEDRRKEYVKQAKTKAE 122
Query: 214 EGKV 217
EG+V
Sbjct: 123 EGRV 126
>gi|85859433|ref|YP_461635.1| ribosome recycling factor [Syntrophus aciditrophicus SB]
gi|123516615|sp|Q2LTQ4.1|RRF_SYNAS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|85722524|gb|ABC77467.1| ribosome recycling factor [Syntrophus aciditrophicus SB]
Length = 185
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 62/125 (49%), Positives = 89/125 (71%)
Query: 93 KSSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPD 152
K + ++K ME+ + + +FN VRTGR++ ++LD I+ +YYG+P L +A ++ P+
Sbjct: 2 KDMVFDELKQNMEKGLQALEKSFNKVRTGRASISLLDGIKADYYGTPTPLNQVATLSVPE 61
Query: 153 SSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQA 212
S +LI P+D S+L +IEKAI SDLG+ PNNDG+VIR+++P LT RRKEL KVV K A
Sbjct: 62 SRQILISPWDTSALNAIEKAIQKSDLGLVPNNDGKVIRISIPPLTEARRKELVKVVRKMA 121
Query: 213 EEGKV 217
EE KV
Sbjct: 122 EECKV 126
>gi|153940196|ref|YP_001391730.1| ribosome recycling factor [Clostridium botulinum F str. Langeland]
gi|384462739|ref|YP_005675334.1| ribosome recycling factor [Clostridium botulinum F str. 230613]
gi|166230780|sp|A7GG20.1|RRF_CLOBL RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|152936092|gb|ABS41590.1| ribosome recycling factor [Clostridium botulinum F str. Langeland]
gi|295319756|gb|ADG00134.1| ribosome recycling factor [Clostridium botulinum F str. 230613]
Length = 184
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 83/117 (70%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M +TI ++ S++ GR+NPAMLD+IE EYYGS L + I+ P++ LLIQP+D
Sbjct: 12 KMGKTIVALKRELASMKAGRANPAMLDRIEAEYYGSMTPLNQLGNISIPEARVLLIQPWD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
KS+L +IEKAI+ SDLG+ P+NDG VIRL +P+LT E RK + K V K EE KV +
Sbjct: 72 KSALSAIEKAILKSDLGLNPSNDGTVIRLVIPELTEETRKNIVKTVKKTGEEAKVAI 128
>gi|410866734|ref|YP_006981345.1| Ribosome-recycling factor [Propionibacterium acidipropionici ATCC
4875]
gi|410823375|gb|AFV89990.1| Ribosome-recycling factor [Propionibacterium acidipropionici ATCC
4875]
Length = 185
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 86/126 (68%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+ I KD +ME + R +F ++RTGR+NPAM +KI V+YYG+ L+ +A P++
Sbjct: 3 ADIIKDAGKKMESAVSHAREDFAAIRTGRANPAMFNKIMVDYYGAMTPLQQLASFQVPEA 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
++LI PYDK S+ ++EKA+ SDLG+ P+ DG V+R LP LT ERRKE +K+ +AE
Sbjct: 63 RTVLISPYDKGSVNAVEKAVRDSDLGVNPSTDGNVVRCVLPSLTEERRKEYTKMAKAKAE 122
Query: 214 EGKVVM 219
EG++ +
Sbjct: 123 EGRIAV 128
>gi|422418912|ref|ZP_16495867.1| ribosome recycling factor, partial [Listeria seeligeri FSL N1-067]
gi|313633414|gb|EFS00248.1| ribosome recycling factor [Listeria seeligeri FSL N1-067]
Length = 176
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 85/119 (71%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K +ME+ + ++R GR+N ++LD++ V+YYG+ + +A I+ P++ LLI P
Sbjct: 1 KEKMEKAEQALTRQLGTIRAGRANASLLDRLTVDYYGAATPVNQMASISIPEARMLLITP 60
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
YDK+ L IEKAI+ SDLG+TPNNDG V+RL++PQLT ERRKEL K V K+AEE KV +
Sbjct: 61 YDKTILGEIEKAILKSDLGLTPNNDGSVLRLSIPQLTEERRKELVKEVKKEAEEAKVAV 119
>gi|317129173|ref|YP_004095455.1| ribosome recycling factor [Bacillus cellulosilyticus DSM 2522]
gi|315474121|gb|ADU30724.1| ribosome recycling factor [Bacillus cellulosilyticus DSM 2522]
Length = 185
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 86/122 (70%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K + +M ++++ R ++R GR+NP++LDK++VEYYG L +A I P++ L
Sbjct: 7 KQAEVKMSKSVEAFRKELATIRAGRANPSLLDKVQVEYYGMMTPLNQLASIAVPEARMLT 66
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
IQP+DKSSL+ IE+AI +DLG++P NDG +IR+ +P LT ERRKEL K+V + +EE KV
Sbjct: 67 IQPFDKSSLQDIERAIQKADLGLSPTNDGNIIRIAIPALTEERRKELVKLVGRYSEEAKV 126
Query: 218 VM 219
+
Sbjct: 127 AV 128
>gi|374336411|ref|YP_005093098.1| ribosome recycling factor [Oceanimonas sp. GK1]
gi|372986098|gb|AEY02348.1| ribosome recycling factor [Oceanimonas sp. GK1]
Length = 185
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 58/126 (46%), Positives = 93/126 (73%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+ I+ D K RME++++ ++T N VRTGR++P++LD I V+YYG+ L +A I T DS
Sbjct: 3 NDIKTDAKTRMEKSVEALKTQMNKVRTGRAHPSLLDSIHVDYYGASTPLNQLANITTEDS 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
+L + +D+S ++++EKAI++SDLG+ P++ G +IR+ LP LT ERRK+L KVV +AE
Sbjct: 63 RTLAVTVFDRSMIQAVEKAIMTSDLGLNPSSAGAMIRIPLPPLTEERRKDLIKVVRNEAE 122
Query: 214 EGKVVM 219
+G+V +
Sbjct: 123 QGRVAI 128
>gi|325962762|ref|YP_004240668.1| ribosome recycling factor [Arthrobacter phenanthrenivorans Sphe3]
gi|323468849|gb|ADX72534.1| ribosome recycling factor [Arthrobacter phenanthrenivorans Sphe3]
Length = 185
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 86/115 (74%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M++ +++ + +F SVRTGR+NP + +K+ VEYYGSP L+ +A PD+ ++LI P+D
Sbjct: 12 KMDKAVEVAKEDFASVRTGRANPGLYNKVLVEYYGSPTPLQQLASFAIPDARTILITPFD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
K++L+ IE+A+ S++G P+NDG VIR+T+P+LT ERRKE K+V + E+ KV
Sbjct: 72 KTALRDIERALSDSEVGANPSNDGNVIRITIPELTKERRKEYVKIVKTKGEDAKV 126
>gi|317132574|ref|YP_004091888.1| ribosome recycling factor [Ethanoligenens harbinense YUAN-3]
gi|315470553|gb|ADU27157.1| ribosome recycling factor [Ethanoligenens harbinense YUAN-3]
Length = 183
Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 87/122 (71%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
+D + +M +T+ + + + ++R GR+NPA+LDK+ V+YYG+P + IA ++ ++ +L
Sbjct: 5 QDYQVKMTKTVAALESEYGTIRAGRANPAILDKVRVDYYGTPTPINQIAAVSVTEARNLT 64
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
IQP+D + L++IEKAI +SDLG+ P NDG++IR+ P LT ERRKEL K V K E+ KV
Sbjct: 65 IQPWDITQLRAIEKAIYASDLGVNPQNDGKIIRIAFPPLTEERRKELVKTVRKYGEDAKV 124
Query: 218 VM 219
+
Sbjct: 125 AI 126
>gi|312898662|ref|ZP_07758052.1| ribosome recycling factor [Megasphaera micronuciformis F0359]
gi|310620581|gb|EFQ04151.1| ribosome recycling factor [Megasphaera micronuciformis F0359]
Length = 186
Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 89/119 (74%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
+A+ ++TI+ + N +S+RTGR++ ++LD++ V+YYG+P + +A ++ P+ + I P
Sbjct: 11 EAKADKTIENFKRNLSSIRTGRASTSLLDRVSVDYYGTPTPVNQVANVSAPEPRLITISP 70
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
++++ L IEKAI+ SDLG+ PNNDG +IRL +PQLT ERRKELSK V K+AE+ KV +
Sbjct: 71 WERTMLGEIEKAILKSDLGLNPNNDGTIIRLEIPQLTEERRKELSKKVGKEAEDAKVAV 129
>gi|317051930|ref|YP_004113046.1| ribosome recycling factor [Desulfurispirillum indicum S5]
gi|316947014|gb|ADU66490.1| ribosome recycling factor [Desulfurispirillum indicum S5]
Length = 185
Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 95/121 (78%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+VK +M++ ++ R +F+++RTGR++ A+LD ++V+YYG+P LK + PD++++ I
Sbjct: 8 EVKEKMQKAVEATRKDFSTLRTGRASTALLDNVKVDYYGTPTPLKQAGSVTIPDATTISI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QP++ L +IEKAIV+++LG+TP+NDG++IR+++P LT +RRKEL++ V K AE+G++
Sbjct: 68 QPWEPHMLPAIEKAIVAANLGVTPSNDGQMIRISIPPLTEDRRKELTRQVKKFAEDGRIA 127
Query: 219 M 219
+
Sbjct: 128 V 128
>gi|421526087|ref|ZP_15972696.1| ribosome recycling factor [Fusobacterium nucleatum ChDC F128]
gi|402257846|gb|EJU08319.1| ribosome recycling factor [Fusobacterium nucleatum ChDC F128]
Length = 190
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 89/122 (72%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K+ + +M +TI+ V+ F ++R GR+N +MLD ++VE YGS V L I ++ P++ L+
Sbjct: 10 KECEEKMLKTIEAVKEKFTAIRAGRANVSMLDGVKVENYGSEVPLNQIGTVSAPEARLLV 69
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
I P+DKS + IEKA+++++LGMTPNNDG VIRL LP+LT++RRKE K+ +AE GK+
Sbjct: 70 IDPWDKSLIAKIEKALLAANLGMTPNNDGRVIRLVLPELTADRRKEYVKLAKNEAENGKI 129
Query: 218 VM 219
+
Sbjct: 130 AL 131
>gi|332799211|ref|YP_004460710.1| Ribosome-recycling factor [Tepidanaerobacter acetatoxydans Re1]
gi|438002335|ref|YP_007272078.1| Ribosome recycling factor [Tepidanaerobacter acetatoxydans Re1]
gi|332696946|gb|AEE91403.1| Ribosome-recycling factor [Tepidanaerobacter acetatoxydans Re1]
gi|432179129|emb|CCP26102.1| Ribosome recycling factor [Tepidanaerobacter acetatoxydans Re1]
Length = 185
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 63/126 (50%), Positives = 89/126 (70%), Gaps = 4/126 (3%)
Query: 96 IEKDVKARMERTIDMVRTN----FNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTP 151
++K + ME ++ V N F ++R GR++ A+LDKI V+YYGSP + +A ++ P
Sbjct: 1 MDKKIYTEMENQMNEVLVNLKSEFTTIRAGRASAALLDKIYVDYYGSPTPVNQVASVSVP 60
Query: 152 DSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQ 211
+ +LIQP+D L IEKAI+ SDLG+TPNNDG+VIRL LP+LT+ERR+EL K+ K+
Sbjct: 61 EPKMILIQPWDLKMLGVIEKAILKSDLGLTPNNDGKVIRLILPELTAERRQELVKLSKKK 120
Query: 212 AEEGKV 217
AEE KV
Sbjct: 121 AEEAKV 126
>gi|332296167|ref|YP_004438090.1| ribosome-recycling factor [Thermodesulfobium narugense DSM 14796]
gi|332179270|gb|AEE14959.1| Ribosome-recycling factor [Thermodesulfobium narugense DSM 14796]
Length = 185
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 59/120 (49%), Positives = 89/120 (74%)
Query: 100 VKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQ 159
++ RM + +D + F SVRTGR++PA+LD ++V+YYG+ V +K +A ++ D+ +LLI
Sbjct: 9 LRQRMSKAVDNLSKEFASVRTGRASPALLDHVKVDYYGTTVPIKQLANVSQQDARTLLIN 68
Query: 160 PYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
YDK++L++++KAI SDLG+TP DG V+R+ +P LT ERRKEL KVV K AEE +V +
Sbjct: 69 VYDKNALQAVDKAIRLSDLGLTPQVDGMVLRIVIPTLTQERRKELVKVVKKMAEEARVAV 128
>gi|227488622|ref|ZP_03918938.1| ribosome recycling factor [Corynebacterium glucuronolyticum ATCC
51867]
gi|227543226|ref|ZP_03973275.1| ribosome recycling factor [Corynebacterium glucuronolyticum ATCC
51866]
gi|227091516|gb|EEI26828.1| ribosome recycling factor [Corynebacterium glucuronolyticum ATCC
51867]
gi|227181035|gb|EEI62007.1| ribosome recycling factor [Corynebacterium glucuronolyticum ATCC
51866]
Length = 185
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 83/117 (70%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
RME T+D R + +RTGR+NP+M + + E+YG P + +A I+ P+ LLI+PYD
Sbjct: 12 RMEATVDHTREELSHIRTGRANPSMFNGVIAEFYGQPTPINQMATISVPEPRMLLIKPYD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
+S+ IE+AI +SDLG+ P NDG+V+R+T+PQLT ERR+E+ KV + EEGK+ +
Sbjct: 72 MNSMDDIERAIRNSDLGVNPTNDGQVLRVTVPQLTEERRREMVKVAKSKGEEGKIAI 128
>gi|256830146|ref|YP_003158874.1| ribosome recycling factor [Desulfomicrobium baculatum DSM 4028]
gi|256579322|gb|ACU90458.1| ribosome recycling factor [Desulfomicrobium baculatum DSM 4028]
Length = 184
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 87/122 (71%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
+D RM+++ID + +F+ +RTGR++ A++D I VEYYG+P L +A ++ PDS ++
Sbjct: 6 QDCTNRMQKSIDSLEKDFSKLRTGRASTALVDSIRVEYYGTPTPLNQVASVSIPDSRTIS 65
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
I P+D+++ SIEKAI+ SDLG+TP NDG IR+ +P LT ERRK+L K+ K EE KV
Sbjct: 66 ISPWDRNAFNSIEKAIMKSDLGLTPINDGRAIRINIPVLTEERRKDLVKMAKKYTEEAKV 125
Query: 218 VM 219
+
Sbjct: 126 AI 127
>gi|377572944|ref|ZP_09802020.1| ribosome-recycling factor [Mobilicoccus pelagius NBRC 104925]
gi|377538218|dbj|GAB47185.1| ribosome-recycling factor [Mobilicoccus pelagius NBRC 104925]
Length = 180
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 87/121 (71%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+ + +M + I++ + +F S+RTGR+N AM DK+ VEYYG+P ++ +A +P++ ++LI
Sbjct: 3 EAEEKMGKAIEVAKEDFASIRTGRANAAMFDKLLVEYYGAPTPMQQLASFQSPEARTMLI 62
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
P+DK ++ +IEKAI SDLG+ P+NDG IR LP+LT+ERRKE K+ ++ EE KV
Sbjct: 63 TPFDKGAMANIEKAIRESDLGVNPSNDGHSIRCILPELTAERRKEYVKMAQRKGEEAKVA 122
Query: 219 M 219
+
Sbjct: 123 I 123
>gi|283456086|ref|YP_003360650.1| ribosome Recycling Factor (RRF) [Bifidobacterium dentium Bd1]
gi|283102720|gb|ADB09826.1| Ribosome Recycling Factor (RRF) [Bifidobacterium dentium Bd1]
Length = 184
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 88/126 (69%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
++I KA+M ++++ + NF+ +RTGR+NPA+ + I V+YYG+P LK++A I P+
Sbjct: 2 ANIVDQAKAQMAKSVESTKENFSGIRTGRANPALFNGITVDYYGAPTPLKAVATIGVPEP 61
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
+L + P+D S ++EKA+ SDLG +P DG VIRLT+P+LT ERRKE K+ +AE
Sbjct: 62 RTLSVTPFDASQANAVEKALRDSDLGASPRRDGNVIRLTMPELTEERRKEYVKLAKGKAE 121
Query: 214 EGKVVM 219
+GKV +
Sbjct: 122 DGKVAV 127
>gi|257065047|ref|YP_003144719.1| ribosome recycling factor [Slackia heliotrinireducens DSM 20476]
gi|256792700|gb|ACV23370.1| ribosome recycling factor [Slackia heliotrinireducens DSM 20476]
Length = 184
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 59/121 (48%), Positives = 85/121 (70%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + M+ ID ++T F SVRTGR+N +LDKI V+YYG P + +A + P++ L +
Sbjct: 7 DAEIGMDEAIDNLKTAFASVRTGRANAMVLDKIRVDYYGVPTPINQMAAVKVPEAHMLTV 66
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
+P+DKS L+++E AI++SDLG+TP+NDG VIRL P LT ERRKEL+K AEE ++
Sbjct: 67 EPWDKSMLRAVEAAIMASDLGITPSNDGHVIRLPFPVLTEERRKELAKTCHTYAEECRIA 126
Query: 219 M 219
+
Sbjct: 127 I 127
>gi|84498386|ref|ZP_00997183.1| ribosome recycling factor [Janibacter sp. HTCC2649]
gi|84381886|gb|EAP97769.1| ribosome recycling factor [Janibacter sp. HTCC2649]
Length = 185
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 87/117 (74%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M++ +++ + NF ++RTGR++P+M +K+ V+YYG+P L+ +A TP++ ++LI P+D
Sbjct: 12 KMDKAVEVAKDNFAAIRTGRAHPSMFNKVIVDYYGAPTPLQQLASFQTPEARTILISPFD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
K ++ +IEKA+ +DLG+ P+NDG +IR LPQLT ERRKE K+ QAE+ KV +
Sbjct: 72 KGAMNNIEKALRDADLGVNPSNDGNIIRCILPQLTEERRKEYIKMARGQAEDAKVAI 128
>gi|395243036|ref|ZP_10420024.1| Ribosome-recycling factor [Lactobacillus hominis CRBIP 24.179]
gi|394484856|emb|CCI81032.1| Ribosome-recycling factor [Lactobacillus hominis CRBIP 24.179]
Length = 185
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 87/119 (73%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K+ M+++I + + + +R G +N ++LD I+VEYYG+P L +A ++ P++ L+I P
Sbjct: 10 KSNMDKSIAVYQKDLGGIRAGVANASLLDGIKVEYYGAPTPLNQMASVSIPEARVLMITP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
YDKSSL IE AI++SDLG+TP NDG VIR+ +PQLT ERR+E++K V K AE+ K+ +
Sbjct: 70 YDKSSLDDIEHAILASDLGITPANDGTVIRIVIPQLTGERRQEIAKQVGKLAEQAKIAI 128
>gi|297584070|ref|YP_003699850.1| ribosome recycling factor [Bacillus selenitireducens MLS10]
gi|297142527|gb|ADH99284.1| ribosome recycling factor [Bacillus selenitireducens MLS10]
Length = 185
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 88/122 (72%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K+ + RM ++++ SVR GR+NP++LD+++VEYYG L +A I+ P+ L+
Sbjct: 7 KNAEERMNKSLESFGRELGSVRAGRANPSILDRVQVEYYGMMTPLNQLATISVPEGRLLV 66
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
+QP+DKSSL IEKAI +DLG++P+NDG +IR+++P LT ERRKEL KVV + AE+ KV
Sbjct: 67 VQPFDKSSLPDIEKAIQKADLGLSPSNDGNIIRISIPALTEERRKELIKVVGRYAEDAKV 126
Query: 218 VM 219
+
Sbjct: 127 AV 128
>gi|163791595|ref|ZP_02185996.1| ribosome recycling factor [Carnobacterium sp. AT7]
gi|159873144|gb|EDP67247.1| ribosome recycling factor [Carnobacterium sp. AT7]
Length = 185
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 59/115 (51%), Positives = 83/115 (72%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M +T ++ ++R GR+N +LD+I V YYG+P LK +AQI+ P+ L+I P+D
Sbjct: 12 KMVKTESALQRELGTIRAGRANAGLLDRINVVYYGAPTPLKQLAQISVPEPRVLMITPFD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
K+S+ IEK+I+ SDLG++P NDG VIRL +PQLT ERRKEL+K V K+AE KV
Sbjct: 72 KTSISDIEKSIMQSDLGISPANDGNVIRLVIPQLTEERRKELAKKVGKEAENAKV 126
>gi|255994878|ref|ZP_05428013.1| ribosome recycling factor [Eubacterium saphenum ATCC 49989]
gi|255993591|gb|EEU03680.1| ribosome recycling factor [Eubacterium saphenum ATCC 49989]
Length = 190
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 62/131 (47%), Positives = 93/131 (70%)
Query: 89 IEAEKSSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQI 148
+E E I + K + E+TI ++ NSVR GR+NP++LD+I V+YYG+P LK+IA I
Sbjct: 3 MEDEMKEIIDNFKEKGEKTISLLTGELNSVRAGRANPSLLDQIRVDYYGTPTPLKNIANI 62
Query: 149 NTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVV 208
+ PD SL+I P+D S++K I KAI S+LG+ P +DG+ IRL +PQLT ERRKE++K+V
Sbjct: 63 SVPDPKSLMISPFDPSAIKEIIKAINESELGINPLDDGKNIRLKVPQLTEERRKEITKMV 122
Query: 209 AKQAEEGKVVM 219
+ ++ K+ +
Sbjct: 123 KQITDDAKIAI 133
>gi|34762371|ref|ZP_00143373.1| Ribosome Recycling Factor (RRF) [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
gi|27887953|gb|EAA25019.1| Ribosome Recycling Factor (RRF) [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
Length = 190
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 89/122 (72%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K+ + +M +TI+ V+ F ++R GR+N +MLD ++VE YGS V L I ++ P++ L+
Sbjct: 10 KECEEKMVKTIEAVKEKFTAIRAGRANVSMLDGVKVENYGSEVPLNQIGTVSAPEARLLV 69
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
I P+DKS + +EKA+++++LGMTPNNDG VIRL LP+LT+ERRKE K+ +AE GK+
Sbjct: 70 IDPWDKSLISKVEKALLAANLGMTPNNDGRVIRLVLPELTAERRKEYVKLAKNEAENGKI 129
Query: 218 VM 219
+
Sbjct: 130 AV 131
>gi|258406064|ref|YP_003198806.1| ribosome recycling factor [Desulfohalobium retbaense DSM 5692]
gi|257798291|gb|ACV69228.1| ribosome recycling factor [Desulfohalobium retbaense DSM 5692]
Length = 184
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 58/125 (46%), Positives = 88/125 (70%)
Query: 95 SIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSS 154
SI D K RME+ I + F+ +RTGR++ +++D I+V YY +P L +A I+ PD+
Sbjct: 3 SIFTDAKKRMEKAITNLEKEFSRLRTGRASASLVDGIQVSYYNTPTPLNQLASISIPDAR 62
Query: 155 SLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEE 214
++ IQP+D+SS ++IEKAI+ SDLG+ P NDG++IR+ +P LT ERRKEL K+ K E+
Sbjct: 63 TIAIQPWDRSSFENIEKAIMQSDLGLNPVNDGKIIRINIPALTEERRKELVKIAKKHTED 122
Query: 215 GKVVM 219
K+ +
Sbjct: 123 AKIAI 127
>gi|237741356|ref|ZP_04571837.1| ribosome Recycling Factor [Fusobacterium sp. 4_1_13]
gi|229430888|gb|EEO41100.1| ribosome Recycling Factor [Fusobacterium sp. 4_1_13]
Length = 190
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 89/122 (72%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K+ + +M +TI+ V+ F ++R GR+N +MLD I+VE YGS V L I ++ P++ L+
Sbjct: 10 KECEEKMLKTIEAVKEKFTAIRAGRANVSMLDGIKVENYGSEVPLNQIGTVSAPEARLLV 69
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
I P+DKS + IEKA+++++LGMTPNNDG VIRL LP+LT++RRKE K+ +AE GK+
Sbjct: 70 IDPWDKSLISKIEKALLAANLGMTPNNDGRVIRLVLPELTADRRKEYVKLAKNEAENGKI 129
Query: 218 VM 219
+
Sbjct: 130 AV 131
>gi|171742888|ref|ZP_02918695.1| hypothetical protein BIFDEN_02005 [Bifidobacterium dentium ATCC
27678]
gi|171278502|gb|EDT46163.1| ribosome recycling factor [Bifidobacterium dentium ATCC 27678]
Length = 186
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 88/126 (69%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
++I KA+M ++++ + NF+ +RTGR+NPA+ + I V+YYG+P LK++A I P+
Sbjct: 4 ANIVDQAKAQMAKSVESTKENFSGIRTGRANPALFNGITVDYYGAPTPLKAVATIGVPEP 63
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
+L + P+D S ++EKA+ SDLG +P DG VIRLT+P+LT ERRKE K+ +AE
Sbjct: 64 RTLSVTPFDASQANAVEKALRDSDLGASPRRDGNVIRLTMPELTEERRKEYVKLAKGKAE 123
Query: 214 EGKVVM 219
+GKV +
Sbjct: 124 DGKVAV 129
>gi|392957549|ref|ZP_10323072.1| ribosome recycling factor [Bacillus macauensis ZFHKF-1]
gi|391876512|gb|EIT85109.1| ribosome recycling factor [Bacillus macauensis ZFHKF-1]
Length = 185
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 60/117 (51%), Positives = 82/117 (70%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
RM++ I + SVR GR+NP++LD+I V+YYG+ L +A I P++ L+IQPYD
Sbjct: 12 RMKKGISAFQRELTSVRAGRANPSLLDRITVDYYGAATPLNQMAGITVPEARLLVIQPYD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
K+ L IEKAI SDLG+T +NDG++IR+ +P LT ERRKEL K+V K EE KV +
Sbjct: 72 KTVLGDIEKAIQKSDLGLTTSNDGQIIRIAIPALTEERRKELVKLVKKYGEEAKVAL 128
>gi|210622737|ref|ZP_03293329.1| hypothetical protein CLOHIR_01277 [Clostridium hiranonis DSM 13275]
gi|210154069|gb|EEA85075.1| hypothetical protein CLOHIR_01277 [Clostridium hiranonis DSM 13275]
Length = 185
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 90/122 (73%)
Query: 96 IEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSS 155
+ + ++ +M+ TI+ ++ F ++R GR+N AMLDK+ V+YYG+ + +A I+ P+ +
Sbjct: 5 VHEQLEQKMDATIEALKFEFGTIRAGRANAAMLDKVRVDYYGTLTPINQMAAISVPEPRT 64
Query: 156 LLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEG 215
L+I P+DKSS+ IEKAI +SD+G+TP+NDG VIRL++P LT ERRKEL+K K +E+
Sbjct: 65 LMITPWDKSSMHEIEKAIANSDVGLTPSNDGSVIRLSVPALTEERRKELAKKAHKASEDF 124
Query: 216 KV 217
KV
Sbjct: 125 KV 126
>gi|456862186|gb|EMF80764.1| ribosome recycling factor [Leptospira weilii serovar Topaz str.
LT2116]
Length = 184
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 89/120 (74%)
Query: 100 VKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQ 159
+K +ME+TID+++ + +VRTGR+NP++++ I V+YYG+ + + I+ P+ L+I
Sbjct: 10 MKTKMEKTIDLLKKDLGTVRTGRANPSLVEDIRVDYYGTLTPINQLGNISVPEPRMLVIS 69
Query: 160 PYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
PYDK +K IEKAI +S LG+ P+NDG VIR+ +P+LT ERRKEL+K+V ++E+ KV +
Sbjct: 70 PYDKGIMKDIEKAIQTSGLGLQPSNDGVVIRIVIPELTGERRKELAKIVKSKSEDKKVAI 129
>gi|256846527|ref|ZP_05551984.1| ribosome recycling factor [Fusobacterium sp. 3_1_36A2]
gi|294784116|ref|ZP_06749417.1| ribosome recycling factor [Fusobacterium sp. 3_1_27]
gi|421144909|ref|ZP_15604811.1| ribosome recycling factor (RRF) [Fusobacterium nucleatum subsp.
fusiforme ATCC 51190]
gi|256718296|gb|EEU31852.1| ribosome recycling factor [Fusobacterium sp. 3_1_36A2]
gi|294488186|gb|EFG35531.1| ribosome recycling factor [Fusobacterium sp. 3_1_27]
gi|395488676|gb|EJG09529.1| ribosome recycling factor (RRF) [Fusobacterium nucleatum subsp.
fusiforme ATCC 51190]
Length = 190
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 89/122 (72%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K+ + +M +TI+ V+ F ++R GR+N +MLD ++VE YGS V L I ++ P++ L+
Sbjct: 10 KECEEKMLKTIEAVKEKFTAIRAGRANVSMLDGVKVENYGSEVPLNQIGTVSAPEARLLV 69
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
I P+DKS + +EKA+++++LGMTPNNDG VIRL LP+LT+ERRKE K+ +AE GK+
Sbjct: 70 IDPWDKSLISKVEKALLAANLGMTPNNDGRVIRLVLPELTAERRKEYVKLAKNEAENGKI 129
Query: 218 VM 219
+
Sbjct: 130 AV 131
>gi|294783615|ref|ZP_06748939.1| ribosome recycling factor [Fusobacterium sp. 1_1_41FAA]
gi|294480493|gb|EFG28270.1| ribosome recycling factor [Fusobacterium sp. 1_1_41FAA]
Length = 190
Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 89/122 (72%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K+ + +M +TI+ V+ F S+R GR+N AMLD ++VE YGS V L + ++ P++ L+
Sbjct: 10 KECEEKMLKTIEAVKERFTSIRAGRANVAMLDAVKVENYGSEVPLNQVGTVSAPEARLLV 69
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
I P+DK+ + IEKA+++++LGMTPNNDG VIRL LP+LT++RRKE K+ +AE GK+
Sbjct: 70 IDPWDKTLIPKIEKALLAANLGMTPNNDGRVIRLVLPELTADRRKEYVKLAKNEAENGKI 129
Query: 218 VM 219
+
Sbjct: 130 AV 131
>gi|357055615|ref|ZP_09116682.1| ribosome-recycling factor [Clostridium clostridioforme 2_1_49FAA]
gi|355382279|gb|EHG29379.1| ribosome-recycling factor [Clostridium clostridioforme 2_1_49FAA]
Length = 183
Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 89/117 (76%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M +T+D++ +++ ++R GR+NP +LDKI+V+YYG+P L+ + ++ P++ ++IQP++
Sbjct: 10 KMNKTLDVLLSDYGTIRAGRANPHVLDKIKVDYYGTPTPLQQVGNVSVPEARMIVIQPWE 69
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
KS LK IEKAI++S+LG+ P NDG IRL P++T ERR+E+SK V K+ + KV +
Sbjct: 70 KSLLKPIEKAILTSELGINPTNDGNCIRLVFPEMTEERRREVSKDVKKKGDNAKVAL 126
>gi|429247619|ref|ZP_19210859.1| ribosome recycling factor [Clostridium botulinum CFSAN001628]
gi|428755364|gb|EKX77995.1| ribosome recycling factor [Clostridium botulinum CFSAN001628]
Length = 172
Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 61/116 (52%), Positives = 82/116 (70%)
Query: 104 MERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDK 163
M +TI ++ S++ GR+NPAMLD+IE EYYGS L + I+ P++ LLIQP+DK
Sbjct: 1 MGKTIVALKRELASMKAGRANPAMLDRIEAEYYGSMTPLNQLGNISVPEARVLLIQPWDK 60
Query: 164 SSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
S+L +IEKAI+ SDLG+ P+NDG VIRL +P+LT E RK + K V K EE KV +
Sbjct: 61 SALSAIEKAILKSDLGLNPSNDGTVIRLVIPELTEETRKNIVKTVKKTGEEAKVAI 116
>gi|404258921|ref|ZP_10962238.1| ribosome-recycling factor [Gordonia namibiensis NBRC 108229]
gi|403402701|dbj|GAC00648.1| ribosome-recycling factor [Gordonia namibiensis NBRC 108229]
Length = 185
Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 56/121 (46%), Positives = 86/121 (71%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + +ME+ +++ + + S+RTGR+NPAM +KI +EYYG+ + +A INTP+ ++I
Sbjct: 8 DAEEKMEKAVNVAKEDMGSIRTGRANPAMFNKINIEYYGAMTPVTQVASINTPEPRLVVI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
+PY+ SSL+ IE AI +SDLG+ P NDG +IR+ +PQLT ERR+EL K + E+ KV
Sbjct: 68 KPYEASSLRDIETAIRNSDLGVNPTNDGTIIRIAIPQLTEERRRELVKQAKGKGEDAKVA 127
Query: 219 M 219
+
Sbjct: 128 I 128
>gi|223994729|ref|XP_002287048.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220978363|gb|EED96689.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 179
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 61/121 (50%), Positives = 81/121 (66%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + RM++T+ + N ++RTGR+NP MLD++E +YYG+ L +A I+ P S L +
Sbjct: 2 DCEERMDKTMASLAENLATIRTGRANPNMLDRVECDYYGATTPLSQMATISVPSSQQLQV 61
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
P+DKS L IEKAI+ S LG TPNNDG VIR+ +PQLT ERRKEL K EE KV
Sbjct: 62 SPFDKSVLNDIEKAIIYSGLGFTPNNDGSVIRINIPQLTEERRKELLKQCKSIGEEAKVA 121
Query: 219 M 219
+
Sbjct: 122 I 122
>gi|333378577|ref|ZP_08470308.1| ribosome-recycling factor [Dysgonomonas mossii DSM 22836]
gi|332883553|gb|EGK03836.1| ribosome-recycling factor [Dysgonomonas mossii DSM 22836]
Length = 187
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 58/127 (45%), Positives = 93/127 (73%)
Query: 91 AEKSSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINT 150
A+ IE+ +A+M +++ + + +R G++NP +LD I++EYYGS L +A INT
Sbjct: 3 ADLKQIEQKAEAKMLASVEFLDETLSRIRAGKANPHILDGIKLEYYGSITPLSGVAAINT 62
Query: 151 PDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAK 210
PD+ ++++QP++K LK +EKAI++SD+G+TP+N+GEVIRL++P LT ERRK L K +
Sbjct: 63 PDARTIIVQPWEKQMLKEVEKAILNSDVGITPDNNGEVIRLSIPPLTEERRKLLVKQAKQ 122
Query: 211 QAEEGKV 217
+AE+ KV
Sbjct: 123 EAEDAKV 129
>gi|262066278|ref|ZP_06025890.1| ribosome recycling factor [Fusobacterium periodonticum ATCC 33693]
gi|291379973|gb|EFE87491.1| ribosome recycling factor [Fusobacterium periodonticum ATCC 33693]
Length = 190
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 89/122 (72%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K+ + +M +TI+ V+ F S+R GR+N AMLD ++VE YGS V L I ++ P++ L+
Sbjct: 10 KECEEKMLKTIESVKERFTSIRAGRANVAMLDGVKVENYGSDVPLNQIGSVSAPEARLLV 69
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
I P+DK+ + IEKA+++++LGMTPNNDG VIRL LP+LT++RRKE K+ +AE GK+
Sbjct: 70 IDPWDKTLIPKIEKALLAANLGMTPNNDGRVIRLVLPELTADRRKEYVKLAKNEAENGKI 129
Query: 218 VM 219
+
Sbjct: 130 AV 131
>gi|365157169|ref|ZP_09353450.1| ribosome-recycling factor [Bacillus smithii 7_3_47FAA]
gi|363625903|gb|EHL76914.1| ribosome-recycling factor [Bacillus smithii 7_3_47FAA]
Length = 185
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 59/119 (49%), Positives = 86/119 (72%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K +M + I + ++R GR+N ++LDK+ V+YYG+P + +A I+ P++ L+IQP
Sbjct: 10 KDKMSKAIQALSRELATIRAGRANASLLDKVVVDYYGAPTPVNQLASISVPEARLLVIQP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
YDKS + +EKAI+ SDLG+TP +DG VIR+T+P LT ERRKEL K+V K+AEE KV +
Sbjct: 70 YDKSVVGEVEKAILKSDLGLTPTSDGSVIRITIPPLTEERRKELVKLVRKEAEEAKVAV 128
>gi|315641203|ref|ZP_07896280.1| ribosome recycling factor [Enterococcus italicus DSM 15952]
gi|315482970|gb|EFU73489.1| ribosome recycling factor [Enterococcus italicus DSM 15952]
Length = 185
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 58/126 (46%), Positives = 88/126 (69%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+I ++K +ME+T + ++ +R GR+N ++LD+I V YYG+P + +A I P++
Sbjct: 3 DAILNEIKTKMEKTAENLQRELGQIRAGRANASLLDRISVVYYGAPTPINQLASITIPEA 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
L+I P+DKS+LK IEKAI++SD+G+ P +DG VIRL +PQLT ERRKEL K V K+ E
Sbjct: 63 RILMITPFDKSTLKDIEKAILASDIGINPTSDGNVIRLVIPQLTEERRKELVKEVKKETE 122
Query: 214 EGKVVM 219
K+ +
Sbjct: 123 SAKIAI 128
>gi|89895289|ref|YP_518776.1| ribosome recycling factor [Desulfitobacterium hafniense Y51]
gi|423073374|ref|ZP_17062115.1| ribosome recycling factor [Desulfitobacterium hafniense DP7]
gi|122482357|sp|Q24UG0.1|RRF_DESHY RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|89334737|dbj|BAE84332.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|361855825|gb|EHL07778.1| ribosome recycling factor [Desulfitobacterium hafniense DP7]
Length = 185
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 88/122 (72%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K+ + RM + ++ ++ + ++R GR+NP MLDKI VEYYG+ + +A I+ P+ L
Sbjct: 7 KEAEDRMVKAVEALKREYATIRAGRANPNMLDKITVEYYGTQTPVNQLANISVPEPRMLT 66
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
IQP+DKSSL IEKAI+ SDLG+ P++DG VIRL +PQLT+ERR E+ K V K+AE+ +V
Sbjct: 67 IQPWDKSSLPMIEKAILKSDLGLNPSSDGTVIRLLIPQLTAERRTEIVKTVKKKAEDSRV 126
Query: 218 VM 219
+
Sbjct: 127 AV 128
>gi|229918658|ref|YP_002887304.1| ribosome recycling factor [Exiguobacterium sp. AT1b]
gi|229470087|gb|ACQ71859.1| ribosome recycling factor [Exiguobacterium sp. AT1b]
Length = 186
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 88/122 (72%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K + +ME+ ++ +F ++RTGR++ ++LD ++V+YYG P L +A INTP++ LL
Sbjct: 8 KTAEEKMEKAHSSLKRDFGTLRTGRASASILDPVQVDYYGVPTPLNQVANINTPEARLLL 67
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
IQP+DKS + +EKAI +DLG++P++DG VIRL +P LT ERRKEL K+ K AEE KV
Sbjct: 68 IQPWDKSMVSEVEKAIQKADLGLSPSSDGTVIRLAIPALTEERRKELVKITKKYAEEAKV 127
Query: 218 VM 219
+
Sbjct: 128 AV 129
>gi|148380389|ref|YP_001254930.1| ribosome recycling factor [Clostridium botulinum A str. ATCC 3502]
gi|153933414|ref|YP_001384607.1| ribosome recycling factor [Clostridium botulinum A str. ATCC 19397]
gi|153934708|ref|YP_001388123.1| ribosome recycling factor [Clostridium botulinum A str. Hall]
gi|166230778|sp|A7FPZ5.1|RRF_CLOB1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|166230779|sp|A5I4K9.1|RRF_CLOBH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|148289873|emb|CAL83981.1| ribosome recycling factor [Clostridium botulinum A str. ATCC 3502]
gi|152929458|gb|ABS34958.1| ribosome recycling factor [Clostridium botulinum A str. ATCC 19397]
gi|152930622|gb|ABS36121.1| ribosome recycling factor [Clostridium botulinum A str. Hall]
Length = 184
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 60/117 (51%), Positives = 82/117 (70%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M +TI ++ S++ GR+NPAMLD+IE EYYGS L + I+ P++ LLIQP+D
Sbjct: 12 KMGKTIVALKKELASMKAGRANPAMLDRIEAEYYGSMTPLNQLGNISVPEARVLLIQPWD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
K +L +IEKAI+ SDLG+ P+NDG VIRL +P+LT E RK + K V K EE KV +
Sbjct: 72 KGALSAIEKAILKSDLGLNPSNDGTVIRLVIPELTEETRKNIVKTVKKTGEEAKVAI 128
>gi|257055044|ref|YP_003132876.1| ribosome recycling factor [Saccharomonospora viridis DSM 43017]
gi|256584916|gb|ACU96049.1| ribosome recycling factor [Saccharomonospora viridis DSM 43017]
Length = 185
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 80/119 (67%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + +ME+ + + SVRTGR+ PAM +I VEYYG+P L +A +N P++ +I
Sbjct: 8 DAEEKMEKAVSFAKEELASVRTGRATPAMFSRIVVEYYGAPTPLNQLASVNIPEARMAII 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
+PYD S L +IEKAI SDLG+ P NDG +IR+ +PQLT ERRKE+ K+ + EE ++
Sbjct: 68 KPYDGSQLANIEKAIRESDLGVNPTNDGSIIRVVIPQLTEERRKEMVKIAKGKGEEARI 126
>gi|239917205|ref|YP_002956763.1| ribosome recycling factor [Micrococcus luteus NCTC 2665]
gi|281414322|ref|ZP_06246064.1| ribosome recycling factor [Micrococcus luteus NCTC 2665]
gi|259494549|sp|C5C9Q7.1|RRF_MICLC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|239838412|gb|ACS30209.1| ribosome recycling factor [Micrococcus luteus NCTC 2665]
Length = 185
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 58/115 (50%), Positives = 87/115 (75%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M+RTI+ R +F SVRTGR+NP + K+ V+YYGS L+ +A T D+ +LLI P+D
Sbjct: 12 QMDRTIEATREDFVSVRTGRANPGLYSKVMVDYYGSFTPLQQLASFTTTDARTLLITPFD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
+S+L++IEKA+ S++G P+NDG+VIR+ +P+LT+ERRKE K+V +AEE K+
Sbjct: 72 QSALRNIEKALSESEVGANPSNDGKVIRIVMPELTAERRKEYVKLVKSKAEEHKI 126
>gi|310287530|ref|YP_003938788.1| ribosome recycling factor RRF [Bifidobacterium bifidum S17]
gi|311064443|ref|YP_003971168.1| ribosome recycling factor Rrf [Bifidobacterium bifidum PRL2010]
gi|313140313|ref|ZP_07802506.1| ribosome recycling factor [Bifidobacterium bifidum NCIMB 41171]
gi|390936904|ref|YP_006394463.1| ribosome recycling factor [Bifidobacterium bifidum BGN4]
gi|421735561|ref|ZP_16174477.1| ribosome recycling factor [Bifidobacterium bifidum IPLA 20015]
gi|309251466|gb|ADO53214.1| ribosome recycling factor RRF [Bifidobacterium bifidum S17]
gi|310866762|gb|ADP36131.1| Rrf Ribosome Recycling Factor [Bifidobacterium bifidum PRL2010]
gi|313132823|gb|EFR50440.1| ribosome recycling factor [Bifidobacterium bifidum NCIMB 41171]
gi|389890517|gb|AFL04584.1| ribosome recycling factor [Bifidobacterium bifidum BGN4]
gi|407297150|gb|EKF16616.1| ribosome recycling factor [Bifidobacterium bifidum IPLA 20015]
Length = 184
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 85/119 (71%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K +M ++++ + NF +RTGR+NPA+L+ I V+YYG+P LK++A I P+ +L + P
Sbjct: 9 KEQMNKSVENTKENFAGIRTGRANPALLNGIVVDYYGAPTPLKAVASIGVPEPRTLSVTP 68
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
+D S +EKA+ SDLG+ PN DG VIR+T+P+LTSERRKE K+ +AE+GKV +
Sbjct: 69 FDVSQASKVEKALRDSDLGVNPNRDGNVIRITMPELTSERRKEYVKLAKSKAEDGKVAV 127
>gi|408792609|ref|ZP_11204219.1| ribosome recycling factor [Leptospira meyeri serovar Hardjo str.
Went 5]
gi|408464019|gb|EKJ87744.1| ribosome recycling factor [Leptospira meyeri serovar Hardjo str.
Went 5]
Length = 183
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 92/126 (73%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
I K ++++M++T+D ++ +F ++RTG+++P M++ + V+YYG+ L + +I P+
Sbjct: 3 DEIIKSMQSKMDKTVDALKKDFGTIRTGKASPMMVEDVRVDYYGTLTPLNQLGKIACPEP 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
+LI P++K LK IEKAI ++ LG+TPNNDG IR+ +P+LT ERRKEL+KVV ++AE
Sbjct: 63 RMILITPFEKGMLKDIEKAIFAASLGLTPNNDGSSIRINIPELTGERRKELAKVVKQKAE 122
Query: 214 EGKVVM 219
E KV +
Sbjct: 123 EKKVAI 128
>gi|104774221|ref|YP_619201.1| ribosome recycling factor [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|385815969|ref|YP_005852360.1| Ribosome recycling factor [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
gi|418035071|ref|ZP_12673530.1| hypothetical protein LDBUL1519_00230 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
gi|123077247|sp|Q1G9N9.1|RRF_LACDA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|103423302|emb|CAI98143.1| Ribosome recycling factor [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|325126006|gb|ADY85336.1| Ribosome recycling factor [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
gi|354691009|gb|EHE90949.1| hypothetical protein LDBUL1519_00230 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
Length = 185
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 85/119 (71%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K M ++I++ ++N +VR G +N ++LD++ VEYYG P L +A I P+ L+I P
Sbjct: 10 KRNMNKSIEVYQSNLATVRAGVANASLLDRVMVEYYGVPTPLVQMAGITIPEPRVLMITP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
YDK+SL IE AI++SDLG+TP NDG VIRL +PQLT ERR+E++K V K AEE K+ +
Sbjct: 70 YDKTSLNDIEHAILASDLGLTPANDGNVIRLIIPQLTGERRQEIAKEVGKLAEEAKIAV 128
>gi|303232806|ref|ZP_07319491.1| ribosome recycling factor [Atopobium vaginae PB189-T1-4]
gi|302481292|gb|EFL44367.1| ribosome recycling factor [Atopobium vaginae PB189-T1-4]
Length = 181
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/119 (51%), Positives = 85/119 (71%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K+ M R I ++TNF+ VRTGR+NP +LD I+V+YYG P + +A I P+ + L ++P
Sbjct: 9 KSHMTRAISALKTNFSKVRTGRANPQVLDGIKVDYYGQPTPILQLAGIKVPEPTVLAVEP 68
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
+DKSSLK+IEKAI +SDLG+TP+NDG IRL P+ T +RR EL K + AE+ KV +
Sbjct: 69 WDKSSLKAIEKAIEASDLGITPSNDGVTIRLPFPKPTQQRRLELVKECKQYAEDAKVAI 127
>gi|392960425|ref|ZP_10325893.1| Ribosome-recycling factor [Pelosinus fermentans DSM 17108]
gi|421054818|ref|ZP_15517783.1| ribosome recycling factor [Pelosinus fermentans B4]
gi|421058898|ref|ZP_15521543.1| Ribosome-recycling factor [Pelosinus fermentans B3]
gi|421064787|ref|ZP_15526626.1| Ribosome-recycling factor [Pelosinus fermentans A12]
gi|421071680|ref|ZP_15532796.1| Ribosome-recycling factor [Pelosinus fermentans A11]
gi|392440499|gb|EIW18179.1| ribosome recycling factor [Pelosinus fermentans B4]
gi|392446945|gb|EIW24216.1| Ribosome-recycling factor [Pelosinus fermentans A11]
gi|392455002|gb|EIW31809.1| Ribosome-recycling factor [Pelosinus fermentans DSM 17108]
gi|392459940|gb|EIW36300.1| Ribosome-recycling factor [Pelosinus fermentans B3]
gi|392460383|gb|EIW36691.1| Ribosome-recycling factor [Pelosinus fermentans A12]
Length = 186
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 86/117 (73%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M++ ID +R +++R GR+ PA+LDKI V+YYG+P + +A I P+ + IQ ++
Sbjct: 13 KMKKAIDALRRELSTLRAGRATPALLDKITVDYYGTPTPINQVANIAVPEPRMITIQAWE 72
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
KS + IEKAI+ SDLG+TPN+DG VIRL +PQLT +RR EL KVV K+AE+ ++V+
Sbjct: 73 KSMIAQIEKAILKSDLGLTPNSDGVVIRLNIPQLTQQRRIELVKVVHKKAEDSRIVI 129
>gi|296139389|ref|YP_003646632.1| ribosome recycling factor [Tsukamurella paurometabola DSM 20162]
gi|296027523|gb|ADG78293.1| ribosome recycling factor [Tsukamurella paurometabola DSM 20162]
Length = 185
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 86/119 (72%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + +ME+ + + R +F S+RTGR+NP+M K+ V+YYGSP + I+ I TP++ ++I
Sbjct: 8 DAEEKMEKAVSVAREDFQSIRTGRANPSMFAKVMVDYYGSPTPITQISSITTPEARLVVI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
+PY+ + L +IE AI +SDLG+ P NDG++IR+ +PQLT ERRKEL K V + E+ KV
Sbjct: 68 KPYEANQLGNIETAIRNSDLGVNPTNDGQLIRVGIPQLTEERRKELVKQVKSKGEDAKV 126
>gi|169830793|ref|YP_001716775.1| ribosome recycling factor [Candidatus Desulforudis audaxviator
MP104C]
gi|169637637|gb|ACA59143.1| ribosome recycling factor [Candidatus Desulforudis audaxviator
MP104C]
Length = 174
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 88/116 (75%)
Query: 104 MERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDK 163
M +TI+++ F S+R GR+ PA+LD+I V+YYGS + + +A ++ P++ L+IQP+DK
Sbjct: 1 MMKTIEVLDREFASLRAGRATPALLDRITVDYYGSTIPINQLATVSVPEARLLVIQPWDK 60
Query: 164 SSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
S++ IE+AI+ SDLG+TP++DG +IRL +PQLT ERR++L K + K+ EE KV +
Sbjct: 61 SAIGEIERAILKSDLGITPSSDGNIIRLAVPQLTEERRRDLVKFLKKRGEEAKVAV 116
>gi|421074520|ref|ZP_15535551.1| Ribosome-recycling factor [Pelosinus fermentans JBW45]
gi|392527391|gb|EIW50486.1| Ribosome-recycling factor [Pelosinus fermentans JBW45]
Length = 186
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 86/117 (73%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M++ ID +R +++R GR+ PA+LDKI V+YYG+P + +A I P+ + IQ ++
Sbjct: 13 KMKKAIDALRRELSTLRAGRATPALLDKITVDYYGTPTPINQVANIAVPEPRMITIQAWE 72
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
KS + IEKAI+ SDLG+TPN+DG VIRL +PQLT +RR EL KVV K+AE+ ++V+
Sbjct: 73 KSMIAQIEKAILKSDLGLTPNSDGVVIRLNIPQLTQQRRIELVKVVHKKAEDSRIVI 129
>gi|311030097|ref|ZP_07708187.1| ribosome recycling factor [Bacillus sp. m3-13]
Length = 185
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 84/117 (71%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K RME+ + ++R GR++ A+LDK+ V+YYG+P + +A +N P++ L++QP
Sbjct: 10 KDRMEKAVQAYSRELATIRAGRASAALLDKVTVDYYGAPTPVNQLASLNVPEARLLVVQP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
YDK+SL IEKAI+ +DLG+ P+NDG VIR+++P LT ERRKEL K + K +EE KV
Sbjct: 70 YDKTSLGDIEKAIIKADLGLNPSNDGTVIRISIPALTEERRKELVKQIKKISEEAKV 126
>gi|219669723|ref|YP_002460158.1| ribosome recycling factor [Desulfitobacterium hafniense DCB-2]
gi|254809508|sp|B8FRG2.1|RRF_DESHD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|219539983|gb|ACL21722.1| ribosome recycling factor [Desulfitobacterium hafniense DCB-2]
Length = 185
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 88/122 (72%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K+ + RM + ++ ++ + ++R GR+NP MLDKI VEYYG+ + +A I+ P+ L
Sbjct: 7 KEAEDRMVKAVEALKREYATIRAGRANPNMLDKITVEYYGTQTPVNQLANISVPEPRMLT 66
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
IQP+DKSSL IEKAI+ SDLG+ P++DG VIRL +PQLT+ERR E+ K V K+AE+ +V
Sbjct: 67 IQPWDKSSLPMIEKAILKSDLGLNPSSDGTVIRLLIPQLTAERRTEIVKTVKKKAEDSRV 126
Query: 218 VM 219
+
Sbjct: 127 AV 128
>gi|421734106|ref|ZP_16173193.1| ribosome recycling factor [Bifidobacterium bifidum LMG 13195]
gi|407077994|gb|EKE50813.1| ribosome recycling factor [Bifidobacterium bifidum LMG 13195]
Length = 184
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 85/119 (71%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K +M ++++ + NF +RTGR+NPA+L+ I V+YYG+P LK++A I P+ +L + P
Sbjct: 9 KEQMNKSVENTKENFAGIRTGRANPALLNGIVVDYYGAPTPLKAVASIGVPEPRTLSVTP 68
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
+D S +EKA+ SDLG+ PN DG VIR+T+P+LTSERRKE K+ +AE+GKV +
Sbjct: 69 FDVSQASKVEKALRDSDLGVNPNRDGNVIRITMPELTSERRKEYVKLAKSKAEDGKVAV 127
>gi|254303395|ref|ZP_04970753.1| ribosome recycling factor [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|422338810|ref|ZP_16419770.1| ribosome recycling factor [Fusobacterium nucleatum subsp.
polymorphum F0401]
gi|148323587|gb|EDK88837.1| ribosome recycling factor [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|355371937|gb|EHG19280.1| ribosome recycling factor [Fusobacterium nucleatum subsp.
polymorphum F0401]
Length = 190
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 89/122 (72%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K+ + +M +TI+ V+ F ++R GR+N +MLD ++VE YGS V L I ++ P++ L+
Sbjct: 10 KECEEKMLKTIEAVKEKFTAIRAGRANVSMLDGVKVENYGSEVPLNQIGTVSAPEARLLV 69
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
I P+DKS + IEKA+++++LGMTPNNDG VIRL LP+LT++RRKE K+ +AE GK+
Sbjct: 70 IDPWDKSLISKIEKALLAANLGMTPNNDGRVIRLVLPELTADRRKEYVKLAKNEAENGKI 129
Query: 218 VM 219
+
Sbjct: 130 AV 131
>gi|237743351|ref|ZP_04573832.1| ribosome Recycling Factor [Fusobacterium sp. 7_1]
gi|260495029|ref|ZP_05815158.1| ribosome recycling factor [Fusobacterium sp. 3_1_33]
gi|289766390|ref|ZP_06525768.1| ribosome Recycling Factor [Fusobacterium sp. D11]
gi|336401551|ref|ZP_08582313.1| ribosome-recycling factor [Fusobacterium sp. 21_1A]
gi|423137517|ref|ZP_17125160.1| ribosome-recycling factor [Fusobacterium nucleatum subsp. animalis
F0419]
gi|229433130|gb|EEO43342.1| ribosome Recycling Factor [Fusobacterium sp. 7_1]
gi|260197472|gb|EEW94990.1| ribosome recycling factor [Fusobacterium sp. 3_1_33]
gi|289717945|gb|EFD81957.1| ribosome Recycling Factor [Fusobacterium sp. D11]
gi|336160652|gb|EGN63684.1| ribosome-recycling factor [Fusobacterium sp. 21_1A]
gi|371959899|gb|EHO77570.1| ribosome-recycling factor [Fusobacterium nucleatum subsp. animalis
F0419]
Length = 190
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/126 (46%), Positives = 90/126 (71%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
I K+ + +M +TI+ V+ F ++R GR+N +MLD ++V+ YGS V L I ++ P++
Sbjct: 6 DKIVKECEEKMLKTIEAVKEKFTAIRAGRANVSMLDGVKVDNYGSEVPLNQIGTVSAPEA 65
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
L+I P+DKS + IEKA+++++LGMTPNNDG VIRL LP+LT+ERRKE K+ +AE
Sbjct: 66 RLLVIDPWDKSLISKIEKALLAANLGMTPNNDGRVIRLVLPELTAERRKEYVKLAKNEAE 125
Query: 214 EGKVVM 219
GK+ +
Sbjct: 126 NGKIAV 131
>gi|168180688|ref|ZP_02615352.1| ribosome recycling factor [Clostridium botulinum NCTC 2916]
gi|421833908|ref|ZP_16269076.1| ribosome recycling factor [Clostridium botulinum CFSAN001627]
gi|182668443|gb|EDT80422.1| ribosome recycling factor [Clostridium botulinum NCTC 2916]
gi|409744788|gb|EKN43232.1| ribosome recycling factor [Clostridium botulinum CFSAN001627]
Length = 184
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/117 (51%), Positives = 82/117 (70%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M +TI ++ S++ GR+NPAMLD+IE EYYGS L + I+ P++ LLIQP+D
Sbjct: 12 KMGKTIVALKRELASMKAGRANPAMLDRIEAEYYGSMTPLNQLGNISVPEARVLLIQPWD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
K +L +IEKAI+ SDLG+ P+NDG VIRL +P+LT E RK + K V K EE KV +
Sbjct: 72 KGALSAIEKAILKSDLGLNPSNDGTVIRLVIPELTEETRKNIVKTVKKTGEEAKVAI 128
>gi|323489579|ref|ZP_08094806.1| ribosome recycling factor [Planococcus donghaensis MPA1U2]
gi|323396710|gb|EGA89529.1| ribosome recycling factor [Planococcus donghaensis MPA1U2]
Length = 185
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/123 (47%), Positives = 87/123 (70%)
Query: 95 SIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSS 154
S+ + +++M I + S+R GR+ P++LDK+ ++YYGSP + +A I+ P++
Sbjct: 4 SVMNETQSKMNNAIQAFSRDLASIRAGRATPSILDKLTIDYYGSPTPVNQVAGISIPEAR 63
Query: 155 SLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEE 214
++IQPYDKS L IEKAI+ SDLG++P+NDG VIRL +P LT ERRK+L K V K+AEE
Sbjct: 64 LIMIQPYDKSVLGDIEKAILKSDLGLSPSNDGSVIRLAVPALTEERRKDLVKQVKKEAEE 123
Query: 215 GKV 217
K+
Sbjct: 124 AKI 126
>gi|225026987|ref|ZP_03716179.1| hypothetical protein EUBHAL_01243 [Eubacterium hallii DSM 3353]
gi|224955672|gb|EEG36881.1| ribosome recycling factor [Eubacterium hallii DSM 3353]
Length = 181
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 87/122 (71%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K + +M+++I+ + +NS+R GR+NP +LDKI+V+YYG+P L+ + I+ P+ +
Sbjct: 3 KKFEDKMQKSIESLEREYNSIRAGRANPHVLDKIKVDYYGTPTPLQQVGNISVPEPRIIT 62
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
IQP++ S LK+IEK I+ SD+G+ P NDG+VIRL P+LT ERRKEL K V K+ E KV
Sbjct: 63 IQPWETSLLKAIEKEIMQSDIGINPTNDGKVIRLVFPELTEERRKELVKDVKKKGEAAKV 122
Query: 218 VM 219
+
Sbjct: 123 AI 124
>gi|384564964|ref|ZP_10012068.1| ribosome recycling factor [Saccharomonospora glauca K62]
gi|384520818|gb|EIE98013.1| ribosome recycling factor [Saccharomonospora glauca K62]
Length = 185
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 80/119 (67%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + +ME+ + + + SVRTGR+ PAM +I VEYYG+P L +A I P++ ++
Sbjct: 8 DAEEKMEKAVSFAKEDLASVRTGRATPAMFSRIVVEYYGAPTPLNQLASITIPEARMAVV 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
+PYD S L +IEKAI SDLG+ P NDG +IR+ +PQLT ERRKE+ KV + EE +V
Sbjct: 68 KPYDASQLATIEKAIRDSDLGVNPTNDGNIIRVVIPQLTEERRKEMVKVAKSKGEEARV 126
>gi|319649531|ref|ZP_08003687.1| ribosome recycling factor [Bacillus sp. 2_A_57_CT2]
gi|317398693|gb|EFV79375.1| ribosome recycling factor [Bacillus sp. 2_A_57_CT2]
Length = 185
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/121 (48%), Positives = 85/121 (70%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D K RM + I S+R G++N ++LD+I V+YYG+P + +A ++ P++ L+I
Sbjct: 8 DAKERMTKAISAYTRELASIRAGKANASLLDRITVDYYGAPTPVNQLAGVSAPEARLLVI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
PYDKS L IEKAI+ SD+G+ P+NDG VIRL +PQLT ERRK+L KVV K++E+ KV
Sbjct: 68 TPYDKSILGEIEKAILKSDIGLNPSNDGSVIRLAIPQLTEERRKDLVKVVKKESEDAKVA 127
Query: 219 M 219
+
Sbjct: 128 I 128
>gi|19704944|ref|NP_602439.1| ribosome recycling factor (RRF) [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|296329199|ref|ZP_06871700.1| ribosome recycling factor [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
gi|22001936|sp|Q8R5Z9.1|RRF_FUSNN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|19712846|gb|AAL93738.1| Ribosome Recycling Factor (RRF) [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|296153555|gb|EFG94372.1| ribosome recycling factor [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
Length = 190
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 89/122 (72%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K+ + +M +TI+ V+ F ++R GR+N +MLD I+VE YGS V L I ++ P++ L+
Sbjct: 10 KECEEKMVKTIEAVKEKFTAIRAGRANVSMLDGIKVENYGSEVPLNQIGTVSAPEARLLV 69
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
I P+DK+ + IEKAI+++++GMTPNNDG VIRL LP+LT++RRKE K+ +AE GK+
Sbjct: 70 IDPWDKTLISKIEKAILAANIGMTPNNDGRVIRLVLPELTADRRKEYVKLAKNEAENGKI 129
Query: 218 VM 219
+
Sbjct: 130 AI 131
>gi|374850386|dbj|BAL53376.1| ribosome recycling factor [uncultured candidate division OP1
bacterium]
gi|374856796|dbj|BAL59649.1| ribosome recycling factor [uncultured candidate division OP1
bacterium]
Length = 185
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 90/121 (74%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
++KARM++T+ + +RTGR+NPAM++ ++V+YYG+ LK +A+I P+ ++I
Sbjct: 8 ELKARMDKTVQVFEHELVKLRTGRANPAMVEDVKVDYYGTHTPLKHLARIAAPEPDLIVI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
P+DK+ +++IEKAI +++LG P DGE++R+ +P+LT ERRKELSKV+ +AEE K+
Sbjct: 68 HPFDKTQVQAIEKAIQAANLGFNPTVDGELLRIKIPRLTEERRKELSKVIHDKAEEAKIA 127
Query: 219 M 219
+
Sbjct: 128 L 128
>gi|422739383|ref|ZP_16794564.1| ribosome recycling factor [Enterococcus faecalis TX2141]
gi|315144762|gb|EFT88778.1| ribosome recycling factor [Enterococcus faecalis TX2141]
Length = 185
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 58/119 (48%), Positives = 85/119 (71%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K +M + + +R +R GR+N ++LD+I+V+YYG+P + +A IN P++ L+I P
Sbjct: 10 KEKMTKAEESLRRELGQIRAGRANASLLDRIQVKYYGAPTPVNQLASINIPEARVLMITP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
+DK+S+ IEKAI SD+G++P NDG VIRL +PQLT ERRKEL+K V K+AE KV +
Sbjct: 70 FDKNSIADIEKAIQMSDIGISPTNDGNVIRLVIPQLTEERRKELAKDVKKEAENSKVAV 128
>gi|302342180|ref|YP_003806709.1| ribosome recycling factor [Desulfarculus baarsii DSM 2075]
gi|301638793|gb|ADK84115.1| ribosome recycling factor [Desulfarculus baarsii DSM 2075]
Length = 185
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/121 (47%), Positives = 87/121 (71%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+ K RM + I+ ++ +F+ VRTGR+ P +LD + +YYG P L +A I+ P++ ++I
Sbjct: 8 EAKERMHKAIEALKRDFSRVRTGRATPTILDGVRADYYGQPTPLNQMAGISVPEARLIVI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QP+D S + IEKAI++SDLG+TP +DG+V+R+ P LT ERRK+L+K+V K AEE KV
Sbjct: 68 QPWDPKSCELIEKAILASDLGLTPQSDGKVVRINFPPLTQERRKDLAKLVRKMAEEAKVA 127
Query: 219 M 219
+
Sbjct: 128 V 128
>gi|418028887|ref|ZP_12667436.1| hypothetical protein LDBUL1632_00230 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
gi|354691224|gb|EHE91162.1| hypothetical protein LDBUL1632_00230 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
Length = 185
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 85/119 (71%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K M ++I++ ++N +VR G +N ++LD++ VEYYG P L +A I P+ L+I P
Sbjct: 10 KRNMNKSIEVYQSNLATVRAGVANASLLDRVMVEYYGVPTPLVQMAGITIPEPRVLMITP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
YDK+SL IE AI++SDLG+TP NDG VIRL +PQLT ERR+E++K V K AEE K+ +
Sbjct: 70 YDKTSLNDIEHAILASDLGLTPANDGNVIRLIIPQLTGERRQEIAKEVGKLAEEAKIAV 128
>gi|406575001|ref|ZP_11050715.1| ribosome recycling factor [Janibacter hoylei PVAS-1]
gi|404555617|gb|EKA61105.1| ribosome recycling factor [Janibacter hoylei PVAS-1]
Length = 185
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 81/115 (70%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M + I++ + NF +RTGR NP + + V+YYGSP L+ +A TP++ +LLI P+D
Sbjct: 12 KMGKAIEVAKDNFAGIRTGRVNPGLFSGVMVDYYGSPTPLQQLASFQTPEARTLLITPFD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
KSS+ +IE A+ SDLG P+NDG VIR+T+P+LT+ERRKE K+ Q E+ KV
Sbjct: 72 KSSMGAIESALRDSDLGANPSNDGTVIRVTMPELTAERRKEYIKLAHSQGEDAKV 126
>gi|197303245|ref|ZP_03168286.1| hypothetical protein RUMLAC_01968 [Ruminococcus lactaris ATCC
29176]
gi|197297671|gb|EDY32230.1| ribosome recycling factor [Ruminococcus lactaris ATCC 29176]
Length = 183
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 86/117 (73%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M +TI+ + ++R GR+NP +LDKI V+YYGSP ++ +A ++ P++ + IQP++
Sbjct: 11 KMTKTINNLDGELATIRAGRANPHVLDKIAVDYYGSPTPIQQVANVSVPEARMIQIQPWE 70
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
KS LK+IEKAI++SD+G+ P NDG IRL P+LT +RRKEL+K V K+ EE KV +
Sbjct: 71 KSMLKAIEKAILTSDIGINPTNDGTSIRLVFPELTEDRRKELAKDVKKKGEEAKVAV 127
>gi|303247584|ref|ZP_07333855.1| ribosome recycling factor [Desulfovibrio fructosovorans JJ]
gi|302491064|gb|EFL50958.1| ribosome recycling factor [Desulfovibrio fructosovorans JJ]
Length = 184
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 56/125 (44%), Positives = 89/125 (71%)
Query: 95 SIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSS 154
++ KD + RM++ + + F +RTGR+ ++LD I V+YYG+P L +A ++TPDS
Sbjct: 3 AVLKDAEDRMQKALASLDKEFARLRTGRATTSLLDGIRVDYYGTPTPLDQMASVSTPDSR 62
Query: 155 SLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEE 214
++ I P+D+ + +EKAI+ SDLG+TP NDG++IR+++P LT +RRK+L+KV K AEE
Sbjct: 63 TITIAPWDRKAFHDVEKAILKSDLGLTPVNDGKIIRISIPPLTEDRRKDLAKVAKKYAEE 122
Query: 215 GKVVM 219
KV +
Sbjct: 123 AKVAI 127
>gi|289578399|ref|YP_003477026.1| ribosome recycling factor [Thermoanaerobacter italicus Ab9]
gi|297544675|ref|YP_003676977.1| ribosome recycling factor [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|289528112|gb|ADD02464.1| ribosome recycling factor [Thermoanaerobacter italicus Ab9]
gi|296842450|gb|ADH60966.1| ribosome recycling factor [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 184
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 87/117 (74%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M++++ ++++ ++R GR+NPA+LD+I V+YYG+P L +A I P++ L++QP+D
Sbjct: 11 KMQKSLSVLKSELAAIRAGRANPALLDRIMVDYYGTPTPLNRLATITAPEARVLVVQPWD 70
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
S + IEKAI SDLG+ P +DG+V+RL P+LT ERRKEL K+V K+AEE KV +
Sbjct: 71 VSKISDIEKAIQKSDLGINPVSDGKVLRLVFPELTEERRKELVKLVYKKAEEAKVAV 127
>gi|336419926|ref|ZP_08600176.1| ribosome recycling factor [Fusobacterium sp. 11_3_2]
gi|336162434|gb|EGN65400.1| ribosome recycling factor [Fusobacterium sp. 11_3_2]
Length = 190
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 89/122 (72%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K+ + +M +TI+ V+ F ++R GR+N +MLD ++V+ YGS V L I ++ P++ L+
Sbjct: 10 KECEEKMLKTIEAVKEKFTAIRAGRANVSMLDGVKVDNYGSEVPLNQIGTVSAPEARLLV 69
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
I P+DKS + IEKA+++++LGMTPNNDG VIRL LP+LT+ERRKE K+ +AE GK+
Sbjct: 70 IDPWDKSLISKIEKALLAANLGMTPNNDGRVIRLVLPELTAERRKEYVKLAKNEAENGKI 129
Query: 218 VM 219
+
Sbjct: 130 AV 131
>gi|359425000|ref|ZP_09216104.1| ribosome-recycling factor [Gordonia amarae NBRC 15530]
gi|358239689|dbj|GAB05686.1| ribosome-recycling factor [Gordonia amarae NBRC 15530]
Length = 185
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 86/121 (71%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + +ME+ + + + + S+RTGR+NPAM +K+ +EYYG+ + +A INTP++ ++I
Sbjct: 8 DAEEKMEKAVGVAKDDMGSIRTGRANPAMFNKVHIEYYGALTPITQVASINTPEARLVVI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
+PY+ SSL+ IE AI +SDLG+ P NDG VIR+ +PQLT +RRK+L K + E+ KV
Sbjct: 68 KPYEASSLRDIETAIRNSDLGVNPTNDGNVIRVAIPQLTEDRRKDLVKQAKGKGEDAKVA 127
Query: 219 M 219
+
Sbjct: 128 I 128
>gi|408500959|ref|YP_006864878.1| ribosome recycling factor [Bifidobacterium asteroides PRL2011]
gi|408465783|gb|AFU71312.1| ribosome recycling factor [Bifidobacterium asteroides PRL2011]
Length = 184
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 85/117 (72%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M+++I+ + NF+ +RTGR+NP+ L+ I VEYYG+P +KS+A I P+ +L + P+D
Sbjct: 11 QMDKSIEATKENFSGIRTGRANPSFLNDIMVEYYGTPTPIKSLASIGVPEPRTLAVTPFD 70
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
S ++EKAI SDLG+ P+ DG VIR+T+P+LT ERR+E K+ +AEEGKV +
Sbjct: 71 PSQAGAVEKAIRDSDLGVNPSRDGNVIRVTMPELTEERRREYVKLAKNKAEEGKVAV 127
>gi|375094092|ref|ZP_09740357.1| ribosome recycling factor [Saccharomonospora marina XMU15]
gi|374654825|gb|EHR49658.1| ribosome recycling factor [Saccharomonospora marina XMU15]
Length = 185
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 83/119 (69%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + +ME+ + + + + +SVRTGR+ PAM +I VEYYG+P L +A IN P++ ++
Sbjct: 8 DAEEKMEKAVSVAKDDLSSVRTGRATPAMFSRIVVEYYGAPTPLNQLASINIPEARMAVV 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
+PYD S L +IEKAI SDLG+ P NDG +IR+ +PQLT ERR+E+ KV + E+ ++
Sbjct: 68 KPYDASQLNAIEKAIRDSDLGVNPTNDGTIIRVVIPQLTEERRREMVKVAKSKGEDARI 126
>gi|384159365|ref|YP_005541438.1| ribosome recycling factor [Bacillus amyloliquefaciens TA208]
gi|384168411|ref|YP_005549789.1| ribosome recycling factor [Bacillus amyloliquefaciens XH7]
gi|328553453|gb|AEB23945.1| ribosome recycling factor [Bacillus amyloliquefaciens TA208]
gi|341827690|gb|AEK88941.1| ribosome recycling factor [Bacillus amyloliquefaciens XH7]
Length = 185
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/119 (49%), Positives = 83/119 (69%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K RME+ + SVR GR+NP++LDK+ VEYYG+ L ++ IN ++ L++ P
Sbjct: 10 KERMEKAVAAYSRELASVRAGRANPSLLDKVTVEYYGAQTPLNQLSSINVSEARMLVVTP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
YDK+++ IEKAI+ +DLG+TP +DG +IR+ +P LT ERRKEL KVV K AEE KV +
Sbjct: 70 YDKTAIGDIEKAILKADLGVTPTSDGTIIRIAIPALTEERRKELVKVVKKYAEEAKVAV 128
>gi|295426323|ref|ZP_06818982.1| ribosome recycling factor [Lactobacillus amylolyticus DSM 11664]
gi|295063996|gb|EFG54945.1| ribosome recycling factor [Lactobacillus amylolyticus DSM 11664]
Length = 185
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/119 (49%), Positives = 86/119 (72%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K ME++I + R N S+R G +N ++LD I+V YYG+P LK I+ ++ P+ LLI P
Sbjct: 10 KENMEKSIKVFRKNLASIRAGVANASILDGIQVGYYGAPTPLKQISSVSIPEPRVLLITP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
YD +SL IE A+++S+LG+ P NDG+VIRL +PQLT ERR+E++K V K+AEE K+ +
Sbjct: 70 YDINSLDDIEHALLASNLGLNPANDGKVIRLVIPQLTGERRQEIAKEVGKEAEEAKIAV 128
>gi|410667467|ref|YP_006919838.1| ribosome-recycling factor Frr [Thermacetogenium phaeum DSM 12270]
gi|409105214|gb|AFV11339.1| ribosome-recycling factor Frr [Thermacetogenium phaeum DSM 12270]
Length = 185
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 90/122 (73%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K + +M++T+D++ + ++R GR+ PA+LDK+ +YYG+P + +A I+ P+ L+
Sbjct: 7 KQAEMKMKKTVDLLVKDLATLRAGRATPALLDKVYADYYGTPTPINQMATISVPEPRLLV 66
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
IQP+D++ L IEKAI+ SDLG+TP +DG VIRL +P LT E+RK+L K++ K+AEEG++
Sbjct: 67 IQPWDRNMLSQIEKAILKSDLGITPVSDGNVIRLNIPPLTQEKRKDLVKIINKKAEEGRI 126
Query: 218 VM 219
+
Sbjct: 127 AI 128
>gi|117928746|ref|YP_873297.1| ribosome recycling factor [Acidothermus cellulolyticus 11B]
gi|166230403|sp|A0LV51.1|RRF_ACIC1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|117649209|gb|ABK53311.1| ribosome recycling factor [Acidothermus cellulolyticus 11B]
Length = 185
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 81/117 (69%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+ME+ ++ R NF ++RTGR+NPA+ KI VEYYG+P L +A D+ ++I PYD
Sbjct: 12 KMEKATNVARENFAAIRTGRANPALFSKITVEYYGTPTPLNQLASFTVADARLIVIHPYD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
K SL++IEKAI SDLG+ P +DG VIR+ +P LT ERR++ K+ +AEE +V +
Sbjct: 72 KGSLRAIEKAIRDSDLGVNPTDDGSVIRVAIPPLTEERRRDYIKMARHEAEEARVAI 128
>gi|399888416|ref|ZP_10774293.1| ribosome recycling factor [Clostridium arbusti SL206]
Length = 185
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 85/117 (72%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M +TI +++ S++ GR+NPAMLD+IEVEYYG+ +L +A ++ P+ LLIQPYD
Sbjct: 12 KMSKTISVLKKELTSMKAGRANPAMLDRIEVEYYGTATALNQVANVSAPEPRILLIQPYD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
++++K IE+AI+ S+LG+ P+NDG IRL +P+LT E RK + K V K E+ KV +
Sbjct: 72 RTAIKDIERAILMSNLGLNPSNDGSAIRLVIPELTEETRKNIVKSVKKSGEDAKVAV 128
>gi|403386836|ref|ZP_10928893.1| ribosome recycling factor [Clostridium sp. JC122]
Length = 185
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/122 (50%), Positives = 87/122 (71%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K+ +M +T+ +++ ++++ GR+NP MLD+IEVE YGS V L +A I+ P++ LL
Sbjct: 7 KNADEKMTKTLTVLKGELSTMKAGRANPKMLDRIEVECYGSMVPLNQVANISAPEARVLL 66
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
IQP+DKSSLK IEKAI+ SDLG+ P +DG VIRL +P+LT E RK L K + K E+ KV
Sbjct: 67 IQPWDKSSLKDIEKAILKSDLGLNPTSDGAVIRLMIPELTEETRKNLVKNIKKVGEDAKV 126
Query: 218 VM 219
+
Sbjct: 127 AV 128
>gi|392531186|ref|ZP_10278323.1| ribosome recycling factor [Carnobacterium maltaromaticum ATCC
35586]
gi|414084080|ref|YP_006992788.1| ribosome recycling factor [Carnobacterium maltaromaticum LMA28]
gi|412997664|emb|CCO11473.1| ribosome recycling factor [Carnobacterium maltaromaticum LMA28]
Length = 185
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/121 (47%), Positives = 86/121 (71%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+ K +M + ++ S+R GR+N ++LD+I+VEYYG+P L +A I P++ L++
Sbjct: 8 EAKEKMTKAEQALQRELGSIRAGRANASILDRIQVEYYGAPTPLNQLASITIPEARVLMV 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
P+DK+SL+ IE+A++ SD+G+TP NDG VIRL +P LT ERRKEL+K V K+AE KV
Sbjct: 68 SPFDKTSLQDIERALMQSDVGITPTNDGNVIRLVIPMLTEERRKELAKRVKKEAENSKVT 127
Query: 219 M 219
+
Sbjct: 128 V 128
>gi|383791171|ref|YP_005475745.1| ribosome recycling factor [Spirochaeta africana DSM 8902]
gi|383107705|gb|AFG38038.1| ribosome recycling factor [Spirochaeta africana DSM 8902]
Length = 182
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 89/122 (72%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
KD ++RM+++I + F ++RTGR++ A+ DKI VEYYG+P L +A ++TP++ ++
Sbjct: 4 KDAESRMKKSIKALEEEFAAIRTGRASTALFDKIMVEYYGTPTPLNQVATVSTPEARLVV 63
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
IQP+DKS+L IEKAI S+L + PNNDG+VIR+ +P LT +RRKE+ K + AE+ KV
Sbjct: 64 IQPWDKSALGDIEKAIQKSELSLNPNNDGKVIRINIPPLTEDRRKEIVKSAKQIAEQAKV 123
Query: 218 VM 219
+
Sbjct: 124 AI 125
>gi|152965386|ref|YP_001361170.1| ribosome recycling factor [Kineococcus radiotolerans SRS30216]
gi|189044059|sp|A6W7W7.1|RRF_KINRD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|151359903|gb|ABS02906.1| ribosome recycling factor [Kineococcus radiotolerans SRS30216]
Length = 185
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 84/115 (73%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+ME+ I++ + +F ++RTGR+N AM KI V+YYG+P L+ +A P++ S+LI P+D
Sbjct: 12 KMEKAIEVAKGDFGAIRTGRANAAMFHKIMVDYYGAPTPLQQLASFQIPEARSVLITPFD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
++++ IEKA+ +SDLG+ P NDG VIR+ LPQLT ERRK+ K+ +AE+ +V
Sbjct: 72 RAAMSEIEKALRNSDLGVNPGNDGNVIRIVLPQLTEERRKDYIKIARTKAEDARV 126
>gi|431794501|ref|YP_007221406.1| ribosome recycling factor [Desulfitobacterium dichloroeliminans LMG
P-21439]
gi|430784727|gb|AGA70010.1| ribosome recycling factor [Desulfitobacterium dichloroeliminans LMG
P-21439]
Length = 185
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/126 (47%), Positives = 90/126 (71%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
S + K+ + RM + + ++ + ++R GR+NP MLD+I VEYYG+ + +A I+ P+
Sbjct: 3 SDVLKEAEDRMVKAGESLKREYTTIRAGRANPNMLDRISVEYYGTQTPVNQLANISVPEP 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
L+IQP+DK+SL IEKAI+ SDLG+ P++DG VIRL +PQLT+ERR E+ K V K+AE
Sbjct: 63 RILVIQPWDKTSLPMIEKAILKSDLGLNPSSDGTVIRLIIPQLTAERRTEIVKTVKKKAE 122
Query: 214 EGKVVM 219
E +V +
Sbjct: 123 EARVAV 128
>gi|302872259|ref|YP_003840895.1| ribosome recycling factor [Caldicellulosiruptor obsidiansis OB47]
gi|312135566|ref|YP_004002904.1| ribosome recycling factor [Caldicellulosiruptor owensensis OL]
gi|312793072|ref|YP_004025995.1| ribosome recycling factor [Caldicellulosiruptor kristjanssonii
177R1B]
gi|344996717|ref|YP_004799060.1| ribosome-recycling factor [Caldicellulosiruptor lactoaceticus 6A]
gi|302575118|gb|ADL42909.1| ribosome recycling factor [Caldicellulosiruptor obsidiansis OB47]
gi|311775617|gb|ADQ05104.1| ribosome recycling factor [Caldicellulosiruptor owensensis OL]
gi|312180212|gb|ADQ40382.1| ribosome recycling factor [Caldicellulosiruptor kristjanssonii
177R1B]
gi|343964936|gb|AEM74083.1| Ribosome-recycling factor [Caldicellulosiruptor lactoaceticus 6A]
Length = 184
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 82/117 (70%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M++ I+ ++ F +VR GR+NP +LDK+ V+YYG P + +A I P++ ++IQP++
Sbjct: 11 KMKKAIETLKEEFATVRAGRANPHILDKVMVDYYGVPTPIPQVASITVPEARMIVIQPWE 70
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
LK IEKAI SDLG+ P NDG+VIRL P+LT ERRKEL K V K AE+ KV +
Sbjct: 71 ARMLKEIEKAIQKSDLGVNPTNDGKVIRLIFPELTEERRKELVKQVKKMAEDAKVAI 127
>gi|291542738|emb|CBL15848.1| ribosome recycling factor [Ruminococcus bromii L2-63]
Length = 184
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 85/114 (74%)
Query: 104 MERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDK 163
M+R ++ +RT F+ +R GR+NPA+LDK++V+YYG+P + +A ++ ++ +L IQP+D
Sbjct: 12 MDRRLEHMRTEFSEIRAGRANPAVLDKVKVDYYGAPTPVNQLAAVSVTEARTLTIQPWDA 71
Query: 164 SSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
S L+ IEKAI +SD+G+ P NDG++IRL P LT +RRKE+ K V K AEE K+
Sbjct: 72 SVLRQIEKAIQTSDIGINPQNDGKIIRLIFPPLTEDRRKEIVKDVQKIAEETKI 125
>gi|452077496|gb|AGF93453.1| ribosome recycling factor [uncultured organism]
Length = 177
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 87/118 (73%)
Query: 100 VKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQ 159
++ +ME ++ ++ N V G++NPAM++ ++VEYYGS L IA I+ P+S L+IQ
Sbjct: 1 MEKKMENAVESLQEELNKVHVGQANPAMVEDLKVEYYGSDTPLNQIANISAPESGLLVIQ 60
Query: 160 PYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
PYD S ++SIEKAI+ SDL + PNNDGE+IR+ +P+L+ +RR+EL +V+ ++ EE KV
Sbjct: 61 PYDSSQIESIEKAILESDLSLNPNNDGEIIRVPIPKLSGDRREELVEVIEEKGEEAKV 118
>gi|409391198|ref|ZP_11242890.1| ribosome-recycling factor [Gordonia rubripertincta NBRC 101908]
gi|403199011|dbj|GAB86124.1| ribosome-recycling factor [Gordonia rubripertincta NBRC 101908]
Length = 185
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 86/121 (71%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + +ME+ +++ + + S+RTGR+NPAM +KI +EYYG+ + +A INTP+ ++I
Sbjct: 8 DAEEKMEKAVNVAKEDMGSIRTGRANPAMFNKINIEYYGAMTPVTQVASINTPEPRLVVI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
+PY+ S+L+ IE AI +SDLG+ P NDG +IR+ +PQLT ERR+EL K + E+ KV
Sbjct: 68 KPYEASTLRDIETAIRNSDLGVNPTNDGTIIRIAIPQLTEERRRELVKQAKGKGEDAKVA 127
Query: 219 M 219
+
Sbjct: 128 I 128
>gi|415721058|ref|ZP_11468302.1| ribosome recycling factor [Gardnerella vaginalis 00703Bmash]
gi|415724566|ref|ZP_11469944.1| ribosome recycling factor [Gardnerella vaginalis 00703C2mash]
gi|388061319|gb|EIK83976.1| ribosome recycling factor [Gardnerella vaginalis 00703Bmash]
gi|388062362|gb|EIK84979.1| ribosome recycling factor [Gardnerella vaginalis 00703C2mash]
Length = 184
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 55/117 (47%), Positives = 85/117 (72%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M ++++ + NF +RTGR+NPA+L+ I V+YYG+P +K++A I P+ +L + P+D
Sbjct: 11 QMNKSVEATKENFMGIRTGRANPALLNGIMVDYYGAPTPIKAVASIGVPEPRTLSVTPFD 70
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
S ++EKAI SDLG++PN DG VIR+T+P+LT +RRKE K+ +AEEGKV +
Sbjct: 71 ASQANAVEKAIRDSDLGVSPNRDGNVIRVTMPELTEDRRKEYVKLAKTKAEEGKVAV 127
>gi|260888303|ref|ZP_05899566.1| ribosome recycling factor [Selenomonas sputigena ATCC 35185]
gi|330838370|ref|YP_004412950.1| ribosome recycling factor [Selenomonas sputigena ATCC 35185]
gi|260861839|gb|EEX76339.1| ribosome recycling factor [Selenomonas sputigena ATCC 35185]
gi|329746134|gb|AEB99490.1| ribosome recycling factor [Selenomonas sputigena ATCC 35185]
Length = 185
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 85/117 (72%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
RM++T++ +R +F S+R GR+ PA+LD++ V+YYG P + +A I P+ L+I P++
Sbjct: 12 RMKKTLEALRRDFGSLRAGRATPALLDRVMVDYYGQPTPVSQVAAIAVPEPRMLMITPWE 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
K+ L IEKAI+ SDLG+TPN+DG +RL++PQLT ERR EL K + K+ E+ KV +
Sbjct: 72 KTILHDIEKAIMKSDLGLTPNSDGTAVRLSIPQLTQERRTELVKSLNKKTEDAKVAI 128
>gi|441522881|ref|ZP_21004520.1| ribosome-recycling factor [Gordonia sihwensis NBRC 108236]
gi|441457521|dbj|GAC62481.1| ribosome-recycling factor [Gordonia sihwensis NBRC 108236]
Length = 185
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 86/121 (71%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + +ME+ + +R + S+RTGR+NPAM +K+ ++YYG+P + +A INTP+ ++I
Sbjct: 8 DAEEKMEKAVAHLRDDMASIRTGRANPAMFNKVVIDYYGAPTPITQVAGINTPEPRLVVI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
+PY++S++ IE AI +SDLG+ P NDG VIR+ +PQLT ERRK+L K + E+ KV
Sbjct: 68 KPYEQSTMNDIETAIRNSDLGVNPTNDGTVIRVAIPQLTEERRKQLGKQARGKGEDAKVA 127
Query: 219 M 219
+
Sbjct: 128 I 128
>gi|219127660|ref|XP_002184049.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404280|gb|EEC44227.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 225
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/124 (47%), Positives = 84/124 (67%)
Query: 96 IEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSS 155
+ D RM +++D VR N SVRTGR++ +LD+++V+YYG L +A I+ P +
Sbjct: 45 VTDDASDRMAKSVDSVRLNLQSVRTGRASAQILDRVKVDYYGVETPLNQMATISVPSAQQ 104
Query: 156 LLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEG 215
L I PYDK+SL +IE AIV SDLG+T NNDG +IR+ +P +T +RRKE+ K+ EEG
Sbjct: 105 LSIDPYDKTSLNNIETAIVESDLGLTTNNDGSIIRINIPSMTEDRRKEMLKLCKSIGEEG 164
Query: 216 KVVM 219
KV +
Sbjct: 165 KVAV 168
>gi|227892608|ref|ZP_04010413.1| ribosome recycling factor [Lactobacillus ultunensis DSM 16047]
gi|227865593|gb|EEJ73014.1| ribosome recycling factor [Lactobacillus ultunensis DSM 16047]
Length = 185
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 87/122 (71%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K + M+++I + + S+R G +N A+LD +EVEYYG+P L ++ I P+ LL
Sbjct: 7 KKAQENMDKSIKVYQKKLASIRAGVANAALLDNVEVEYYGAPTPLTQMSSITIPEPRVLL 66
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
I PYD+SSL +IE A+++S+LG+TP NDG+VIRL +PQLT ERR+E++K V K AEE K+
Sbjct: 67 ITPYDQSSLDNIEHALLASNLGLTPANDGKVIRLVIPQLTGERREEIAKEVGKYAEEAKI 126
Query: 218 VM 219
+
Sbjct: 127 AV 128
>gi|402834775|ref|ZP_10883368.1| ribosome recycling factor [Selenomonas sp. CM52]
gi|402277098|gb|EJU26189.1| ribosome recycling factor [Selenomonas sp. CM52]
Length = 185
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 85/117 (72%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
RM++T++ +R +F S+R GR+ PA+LD++ V+YYG P + +A I P+ L+I P++
Sbjct: 12 RMKKTLEALRRDFGSLRAGRATPALLDRVMVDYYGQPTPVSQVAAIAVPEPRMLMITPWE 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
K+ L IEKAI+ SDLG+TPN+DG +RL++PQLT ERR EL K + K+ E+ KV +
Sbjct: 72 KTILHDIEKAIMKSDLGLTPNSDGTAVRLSIPQLTQERRTELVKSLNKKTEDAKVAI 128
>gi|169350431|ref|ZP_02867369.1| hypothetical protein CLOSPI_01199 [Clostridium spiroforme DSM 1552]
gi|169292751|gb|EDS74884.1| ribosome recycling factor [Clostridium spiroforme DSM 1552]
Length = 181
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 58/115 (50%), Positives = 81/115 (70%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
RM +TID + + +VRTGR+NPAMLD++ V YYGSP + +A I+ + L+I+PYD
Sbjct: 12 RMGKTIDSFKRDLTTVRTGRANPAMLDRVMVNYYGSPTPINQMAGISVVEGRQLVIKPYD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
KS +K IE I ++LG+TP NDGE+IR+ +P LT +RR+E +K V K AE KV
Sbjct: 72 KSVIKDIEHGIYEAELGLTPQNDGEIIRIMVPALTEDRRREFAKQVWKFAENAKV 126
>gi|257894708|ref|ZP_05674361.1| ribosome recycling factor [Enterococcus faecium 1,231,408]
gi|257831087|gb|EEV57694.1| ribosome recycling factor [Enterococcus faecium 1,231,408]
Length = 155
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 87/126 (69%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+I + K +M++ ++ +R GR+N ++LD+I V YYG+P L +A I P++
Sbjct: 3 DAIMTEAKEKMKKAAQNLQRELGQIRAGRANASLLDRITVNYYGAPTPLNQMASIQIPEA 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
L+I P+DKS L+ +EKAI++SD+G++P NDG VIRL +PQLT ERRKEL+K V K+AE
Sbjct: 63 RVLMITPFDKSILQDVEKAIMASDIGISPTNDGNVIRLVIPQLTEERRKELAKDVKKEAE 122
Query: 214 EGKVVM 219
K+ +
Sbjct: 123 NAKIAI 128
>gi|340755392|ref|ZP_08692082.1| ribosome-recycling factor [Fusobacterium sp. D12]
gi|373114691|ref|ZP_09528901.1| ribosome-recycling factor [Fusobacterium necrophorum subsp.
funduliforme 1_1_36S]
gi|419840880|ref|ZP_14364266.1| ribosome recycling factor [Fusobacterium necrophorum subsp.
funduliforme ATCC 51357]
gi|421500232|ref|ZP_15947243.1| ribosome recycling factor [Fusobacterium necrophorum subsp.
funduliforme Fnf 1007]
gi|313687219|gb|EFS24054.1| ribosome-recycling factor [Fusobacterium sp. D12]
gi|371651365|gb|EHO16798.1| ribosome-recycling factor [Fusobacterium necrophorum subsp.
funduliforme 1_1_36S]
gi|386906968|gb|EIJ71688.1| ribosome recycling factor [Fusobacterium necrophorum subsp.
funduliforme ATCC 51357]
gi|402268646|gb|EJU18012.1| ribosome recycling factor [Fusobacterium necrophorum subsp.
funduliforme Fnf 1007]
Length = 189
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 91/122 (74%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
++ +++M++T++ + F S+R GR++ AMLD I+VE YGS + L +A ++ P++ L+
Sbjct: 9 QECESKMKKTVEATKEKFTSIRAGRASVAMLDTIKVEQYGSEMPLNQVATVSAPEARLLV 68
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
I P+DK+ + IEKAI++++LGM PNNDG V+RL +P+LT+ERRKE K+ K+AE GK+
Sbjct: 69 IDPWDKTMIPKIEKAILAANLGMNPNNDGRVVRLVMPELTAERRKEYVKLAKKEAENGKI 128
Query: 218 VM 219
+
Sbjct: 129 AV 130
>gi|381210017|ref|ZP_09917088.1| ribosome recycling factor [Lentibacillus sp. Grbi]
Length = 185
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 58/120 (48%), Positives = 87/120 (72%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
KD +++ME+ + N ++R GR+NPA+LD + V+YYG+ L +A I+ P++ L+
Sbjct: 7 KDTRSKMEQAVQAFSKNLATIRAGRANPAILDSVIVDYYGAATPLNQLATISAPEARLLV 66
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
I P+DKSS+ +IEKAI +DLG++P++DG VIR+ +P LT ERRK+L KVV K AEE +V
Sbjct: 67 ITPFDKSSVSNIEKAIQKADLGLSPSSDGNVIRINIPALTEERRKDLVKVVGKYAEEARV 126
>gi|456012667|gb|EMF46355.1| Ribosome recycling factor [Planococcus halocryophilus Or1]
Length = 185
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/123 (47%), Positives = 86/123 (69%)
Query: 95 SIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSS 154
S+ + + +M I + S+R GR+ P++LDK+ ++YYGSP + +A I+ P++
Sbjct: 4 SVMNETETKMSSAIQAFSRDLASIRAGRATPSILDKLSIDYYGSPTPVNQVAGISIPEAR 63
Query: 155 SLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEE 214
++IQPYDKS L IEKAI+ SDLG++P+NDG VIRL +P LT ERRK+L K V K+AEE
Sbjct: 64 LIMIQPYDKSVLGDIEKAILKSDLGLSPSNDGSVIRLAVPALTEERRKDLVKQVKKEAEE 123
Query: 215 GKV 217
K+
Sbjct: 124 AKI 126
>gi|331084701|ref|ZP_08333789.1| ribosome-recycling factor [Lachnospiraceae bacterium 9_1_43BFAA]
gi|330410795|gb|EGG90217.1| ribosome-recycling factor [Lachnospiraceae bacterium 9_1_43BFAA]
Length = 183
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 86/117 (73%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+ME++ + + + ++R GR+NP +LDK+ V+YYGSP ++ +A ++ P++ + IQP++
Sbjct: 11 KMEKSYNSLTSELATIRAGRANPHVLDKLTVDYYGSPTPIQQVANVSVPEARMIQIQPWE 70
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
KS +K IEKAI++SD+G+ P NDG VIRL P+LT ERRKEL K V K+ E GKV +
Sbjct: 71 KSMVKEIEKAILTSDIGINPTNDGTVIRLVFPELTEERRKELVKDVKKKGEAGKVAV 127
>gi|398341403|ref|ZP_10526106.1| ribosome recycling factor [Leptospira kirschneri serovar Bim str.
1051]
Length = 184
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 88/120 (73%)
Query: 100 VKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQ 159
+K +M++TI++V+ +F ++RTGR+NP++++ I V+YY + + + I+ P+ L+I
Sbjct: 10 MKTKMDKTIELVKKDFGTIRTGRANPSLVEDIRVDYYDTQTPINQLGNISVPEPRILVIS 69
Query: 160 PYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
PYDK +K IEKAI +S LG+ P NDG VIR+ +P+LT ERRKEL+KVV ++EE KV +
Sbjct: 70 PYDKGIMKDIEKAIQTSGLGLQPTNDGVVIRIVIPELTGERRKELAKVVKSKSEEKKVAI 129
>gi|365904178|ref|ZP_09441937.1| ribosome recycling factor [Lactobacillus versmoldensis KCTC 3814]
Length = 186
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 87/119 (73%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K M++TI+++ ++R G++N ++L ++VEYYG+ L +A IN P++ LL+ P
Sbjct: 11 KENMKKTIEVLNRELANIRAGKANASILSNVQVEYYGTMAPLNQVASINIPEARVLLVTP 70
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
YDKS+L +IE AI S+DLG+ P NDG+VIRL +PQLT ERR+E++K V K+AE+ +V +
Sbjct: 71 YDKSALDNIEHAINSADLGLNPANDGDVIRLVIPQLTGERRQEIAKKVGKEAEDARVAV 129
>gi|308234682|ref|ZP_07665419.1| ribosome recycling factor [Gardnerella vaginalis ATCC 14018 = JCM
11026]
gi|311114694|ref|YP_003985915.1| ribosome recycling factor [Gardnerella vaginalis ATCC 14019]
gi|385801700|ref|YP_005838103.1| ribosome recycling factor [Gardnerella vaginalis HMP9231]
gi|415702270|ref|ZP_11458492.1| ribosome recycling factor [Gardnerella vaginalis 284V]
gi|415705285|ref|ZP_11460556.1| ribosome recycling factor [Gardnerella vaginalis 75712]
gi|415707221|ref|ZP_11462068.1| ribosome recycling factor [Gardnerella vaginalis 0288E]
gi|415711423|ref|ZP_11464160.1| ribosome recycling factor [Gardnerella vaginalis 55152]
gi|415716467|ref|ZP_11466459.1| ribosome recycling factor [Gardnerella vaginalis 1400E]
gi|417556812|ref|ZP_12207869.1| ribosome recycling factor [Gardnerella vaginalis 315-A]
gi|310946188|gb|ADP38892.1| ribosome recycling factor [Gardnerella vaginalis ATCC 14019]
gi|333393230|gb|AEF31148.1| ribosome recycling factor [Gardnerella vaginalis HMP9231]
gi|333602500|gb|EGL13930.1| ribosome recycling factor [Gardnerella vaginalis 315-A]
gi|388052007|gb|EIK75031.1| ribosome recycling factor [Gardnerella vaginalis 75712]
gi|388053599|gb|EIK76579.1| ribosome recycling factor [Gardnerella vaginalis 284V]
gi|388054221|gb|EIK77166.1| ribosome recycling factor [Gardnerella vaginalis 0288E]
gi|388057084|gb|EIK79917.1| ribosome recycling factor [Gardnerella vaginalis 1400E]
gi|388058257|gb|EIK81054.1| ribosome recycling factor [Gardnerella vaginalis 55152]
Length = 184
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 55/117 (47%), Positives = 85/117 (72%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M ++++ + NF +RTGR+NPA+L+ I V+YYG+P +K++A I P+ +L + P+D
Sbjct: 11 QMNKSVEATKENFMGIRTGRANPALLNGIMVDYYGAPTPIKAVASIGVPEPRTLSVTPFD 70
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
S ++EKAI SDLG++PN DG VIR+T+P+LT +RRKE K+ +AEEGKV +
Sbjct: 71 ASQANAVEKAIRDSDLGVSPNRDGNVIRVTMPELTEDRRKEYVKLAKTKAEEGKVAV 127
>gi|365871115|ref|ZP_09410656.1| ribosome recycling factor [Mycobacterium massiliense CCUG 48898 =
JCM 15300]
gi|397679955|ref|YP_006521490.1| ribosome-recycling factor [Mycobacterium massiliense str. GO 06]
gi|414580700|ref|ZP_11437840.1| ribosome recycling factor [Mycobacterium abscessus 5S-1215]
gi|418247670|ref|ZP_12874056.1| ribosome recycling factor [Mycobacterium abscessus 47J26]
gi|418421299|ref|ZP_12994474.1| ribosome recycling factor [Mycobacterium abscessus subsp. bolletii
BD]
gi|420879212|ref|ZP_15342579.1| ribosome recycling factor [Mycobacterium abscessus 5S-0304]
gi|420884711|ref|ZP_15348071.1| ribosome recycling factor [Mycobacterium abscessus 5S-0421]
gi|420889588|ref|ZP_15352936.1| ribosome recycling factor [Mycobacterium abscessus 5S-0422]
gi|420894562|ref|ZP_15357902.1| ribosome recycling factor [Mycobacterium abscessus 5S-0708]
gi|420903049|ref|ZP_15366380.1| ribosome recycling factor [Mycobacterium abscessus 5S-0817]
gi|420906247|ref|ZP_15369565.1| ribosome recycling factor [Mycobacterium abscessus 5S-1212]
gi|420932299|ref|ZP_15395574.1| ribosome recycling factor [Mycobacterium massiliense 1S-151-0930]
gi|420936785|ref|ZP_15400054.1| ribosome recycling factor [Mycobacterium massiliense 1S-152-0914]
gi|420942558|ref|ZP_15405814.1| ribosome recycling factor [Mycobacterium massiliense 1S-153-0915]
gi|420948789|ref|ZP_15412039.1| ribosome recycling factor [Mycobacterium massiliense 1S-154-0310]
gi|420952817|ref|ZP_15416060.1| ribosome recycling factor [Mycobacterium massiliense 2B-0626]
gi|420956988|ref|ZP_15420224.1| ribosome recycling factor [Mycobacterium massiliense 2B-0107]
gi|420962701|ref|ZP_15425925.1| ribosome recycling factor [Mycobacterium massiliense 2B-1231]
gi|420973185|ref|ZP_15436377.1| ribosome recycling factor [Mycobacterium abscessus 5S-0921]
gi|420992941|ref|ZP_15456087.1| ribosome recycling factor [Mycobacterium massiliense 2B-0307]
gi|420996117|ref|ZP_15459260.1| ribosome recycling factor [Mycobacterium massiliense 2B-0912-R]
gi|421003234|ref|ZP_15466357.1| ribosome recycling factor [Mycobacterium massiliense 2B-0912-S]
gi|421050193|ref|ZP_15513187.1| ribosome recycling factor [Mycobacterium massiliense CCUG 48898 =
JCM 15300]
gi|353452163|gb|EHC00557.1| ribosome recycling factor [Mycobacterium abscessus 47J26]
gi|363994918|gb|EHM16136.1| ribosome recycling factor [Mycobacterium massiliense CCUG 48898 =
JCM 15300]
gi|363997200|gb|EHM18413.1| ribosome recycling factor [Mycobacterium abscessus subsp. bolletii
BD]
gi|392080474|gb|EIU06300.1| ribosome recycling factor [Mycobacterium abscessus 5S-0421]
gi|392084121|gb|EIU09946.1| ribosome recycling factor [Mycobacterium abscessus 5S-0304]
gi|392087336|gb|EIU13158.1| ribosome recycling factor [Mycobacterium abscessus 5S-0422]
gi|392100410|gb|EIU26204.1| ribosome recycling factor [Mycobacterium abscessus 5S-0817]
gi|392100596|gb|EIU26388.1| ribosome recycling factor [Mycobacterium abscessus 5S-0708]
gi|392104151|gb|EIU29937.1| ribosome recycling factor [Mycobacterium abscessus 5S-1212]
gi|392115852|gb|EIU41620.1| ribosome recycling factor [Mycobacterium abscessus 5S-1215]
gi|392137058|gb|EIU62795.1| ribosome recycling factor [Mycobacterium massiliense 1S-151-0930]
gi|392142300|gb|EIU68025.1| ribosome recycling factor [Mycobacterium massiliense 1S-152-0914]
gi|392147655|gb|EIU73373.1| ribosome recycling factor [Mycobacterium massiliense 1S-153-0915]
gi|392155819|gb|EIU81525.1| ribosome recycling factor [Mycobacterium massiliense 1S-154-0310]
gi|392156329|gb|EIU82032.1| ribosome recycling factor [Mycobacterium massiliense 2B-0626]
gi|392164736|gb|EIU90424.1| ribosome recycling factor [Mycobacterium abscessus 5S-0921]
gi|392179043|gb|EIV04695.1| ribosome recycling factor [Mycobacterium massiliense 2B-0307]
gi|392191937|gb|EIV17562.1| ribosome recycling factor [Mycobacterium massiliense 2B-0912-R]
gi|392193806|gb|EIV19427.1| ribosome recycling factor [Mycobacterium massiliense 2B-0912-S]
gi|392238796|gb|EIV64289.1| ribosome recycling factor [Mycobacterium massiliense CCUG 48898]
gi|392245614|gb|EIV71091.1| ribosome recycling factor [Mycobacterium massiliense 2B-1231]
gi|392251798|gb|EIV77269.1| ribosome recycling factor [Mycobacterium massiliense 2B-0107]
gi|395458220|gb|AFN63883.1| Ribosome-recycling factor [Mycobacterium massiliense str. GO 06]
Length = 185
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 86/121 (71%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + +ME+ + + R +F ++RTGR+NP M ++ ++YYG+P + +A IN P++ ++I
Sbjct: 8 DAEEKMEKAVTVARDDFATIRTGRANPGMFQRVVIDYYGTPTPITQVAGINVPEARMVVI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
+PY+ + LK+IE AI +SDLG+ P+NDG +IR+ +PQLT ERR+EL K + E+ KV
Sbjct: 68 KPYESNQLKAIEDAIRNSDLGLNPSNDGSIIRVAIPQLTEERRRELVKQAKGKGEDAKVT 127
Query: 219 M 219
+
Sbjct: 128 L 128
>gi|319786511|ref|YP_004145986.1| ribosome recycling factor [Pseudoxanthomonas suwonensis 11-1]
gi|317465023|gb|ADV26755.1| ribosome recycling factor [Pseudoxanthomonas suwonensis 11-1]
Length = 185
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/126 (48%), Positives = 89/126 (70%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+ I++D +ARM ++I+ +R N VRTGR++ ++D I V YGS V L +A ++ D+
Sbjct: 3 NEIKQDAQARMAKSIEALRHNLVKVRTGRASTGLVDTIRVSAYGSDVPLSQVAAVSVSDA 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
SL+I P+DKS + IEKAI++SDLG+TPN G IRL LP LT ERR++L+KVVA + E
Sbjct: 63 RSLVITPWDKSMVGPIEKAILASDLGLTPNTAGTTIRLNLPALTEERRRDLAKVVASEGE 122
Query: 214 EGKVVM 219
+ KV +
Sbjct: 123 DAKVAI 128
>gi|407477539|ref|YP_006791416.1| ribosome-recycling factor [Exiguobacterium antarcticum B7]
gi|407061618|gb|AFS70808.1| Ribosome-recycling factor [Exiguobacterium antarcticum B7]
Length = 185
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/126 (48%), Positives = 87/126 (69%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+I K + RME+ ++ ++R GR+N A+LD ++VEYYGSP L +A +NTP++
Sbjct: 3 QAIMKQAEERMEKAHLSLKKELATLRAGRANVAILDPVQVEYYGSPTPLNQVANVNTPEA 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
+LI P+DKS + IEKAI +DLG+ P++DG VIRL +P LT +RRKEL K+V K E
Sbjct: 63 RLILITPWDKSMVTEIEKAIQRADLGLAPSSDGTVIRLAIPPLTEDRRKELVKLVKKYTE 122
Query: 214 EGKVVM 219
EGKV +
Sbjct: 123 EGKVAL 128
>gi|169630269|ref|YP_001703918.1| ribosome recycling factor [Mycobacterium abscessus ATCC 19977]
gi|419709573|ref|ZP_14237041.1| ribosome recycling factor [Mycobacterium abscessus M93]
gi|419715070|ref|ZP_14242477.1| ribosome recycling factor [Mycobacterium abscessus M94]
gi|420864592|ref|ZP_15327981.1| ribosome recycling factor [Mycobacterium abscessus 4S-0303]
gi|420869381|ref|ZP_15332763.1| ribosome recycling factor [Mycobacterium abscessus 4S-0726-RA]
gi|420873826|ref|ZP_15337202.1| ribosome recycling factor [Mycobacterium abscessus 4S-0726-RB]
gi|420910805|ref|ZP_15374117.1| ribosome recycling factor [Mycobacterium abscessus 6G-0125-R]
gi|420917258|ref|ZP_15380561.1| ribosome recycling factor [Mycobacterium abscessus 6G-0125-S]
gi|420922423|ref|ZP_15385719.1| ribosome recycling factor [Mycobacterium abscessus 6G-0728-S]
gi|420928084|ref|ZP_15391365.1| ribosome recycling factor [Mycobacterium abscessus 6G-1108]
gi|420967693|ref|ZP_15430897.1| ribosome recycling factor [Mycobacterium abscessus 3A-0810-R]
gi|420978426|ref|ZP_15441603.1| ribosome recycling factor [Mycobacterium abscessus 6G-0212]
gi|420983809|ref|ZP_15446976.1| ribosome recycling factor [Mycobacterium abscessus 6G-0728-R]
gi|420988234|ref|ZP_15451390.1| ribosome recycling factor [Mycobacterium abscessus 4S-0206]
gi|421008407|ref|ZP_15471517.1| ribosome recycling factor [Mycobacterium abscessus 3A-0119-R]
gi|421013780|ref|ZP_15476859.1| ribosome recycling factor [Mycobacterium abscessus 3A-0122-R]
gi|421018726|ref|ZP_15481783.1| ribosome recycling factor [Mycobacterium abscessus 3A-0122-S]
gi|421024932|ref|ZP_15487976.1| ribosome recycling factor [Mycobacterium abscessus 3A-0731]
gi|421030278|ref|ZP_15493309.1| ribosome recycling factor [Mycobacterium abscessus 3A-0930-R]
gi|421035307|ref|ZP_15498326.1| ribosome recycling factor [Mycobacterium abscessus 3A-0930-S]
gi|421040290|ref|ZP_15503298.1| ribosome recycling factor [Mycobacterium abscessus 4S-0116-R]
gi|421044180|ref|ZP_15507180.1| ribosome recycling factor [Mycobacterium abscessus 4S-0116-S]
gi|238688906|sp|B1MDE3.1|RRF_MYCA9 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|169242236|emb|CAM63264.1| Ribosome recycling factor (Ribosome-releasing factor [Mycobacterium
abscessus]
gi|382943454|gb|EIC67768.1| ribosome recycling factor [Mycobacterium abscessus M93]
gi|382944816|gb|EIC69121.1| ribosome recycling factor [Mycobacterium abscessus M94]
gi|392063308|gb|EIT89157.1| ribosome recycling factor [Mycobacterium abscessus 4S-0303]
gi|392065301|gb|EIT91149.1| ribosome recycling factor [Mycobacterium abscessus 4S-0726-RB]
gi|392068851|gb|EIT94698.1| ribosome recycling factor [Mycobacterium abscessus 4S-0726-RA]
gi|392110149|gb|EIU35919.1| ribosome recycling factor [Mycobacterium abscessus 6G-0125-S]
gi|392112799|gb|EIU38568.1| ribosome recycling factor [Mycobacterium abscessus 6G-0125-R]
gi|392127076|gb|EIU52826.1| ribosome recycling factor [Mycobacterium abscessus 6G-0728-S]
gi|392133436|gb|EIU59180.1| ribosome recycling factor [Mycobacterium abscessus 6G-1108]
gi|392162704|gb|EIU88393.1| ribosome recycling factor [Mycobacterium abscessus 6G-0212]
gi|392168805|gb|EIU94483.1| ribosome recycling factor [Mycobacterium abscessus 6G-0728-R]
gi|392182513|gb|EIV08164.1| ribosome recycling factor [Mycobacterium abscessus 4S-0206]
gi|392196555|gb|EIV22171.1| ribosome recycling factor [Mycobacterium abscessus 3A-0119-R]
gi|392201113|gb|EIV26715.1| ribosome recycling factor [Mycobacterium abscessus 3A-0122-R]
gi|392207356|gb|EIV32933.1| ribosome recycling factor [Mycobacterium abscessus 3A-0122-S]
gi|392211729|gb|EIV37295.1| ribosome recycling factor [Mycobacterium abscessus 3A-0731]
gi|392221218|gb|EIV46741.1| ribosome recycling factor [Mycobacterium abscessus 4S-0116-R]
gi|392223498|gb|EIV49020.1| ribosome recycling factor [Mycobacterium abscessus 3A-0930-R]
gi|392225382|gb|EIV50900.1| ribosome recycling factor [Mycobacterium abscessus 3A-0930-S]
gi|392233633|gb|EIV59131.1| ribosome recycling factor [Mycobacterium abscessus 4S-0116-S]
gi|392250200|gb|EIV75674.1| ribosome recycling factor [Mycobacterium abscessus 3A-0810-R]
Length = 185
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 86/121 (71%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + +ME+ + + R +F ++RTGR+NP M ++ ++YYG+P + +A IN P++ ++I
Sbjct: 8 DAEEKMEKAVTVARDDFATIRTGRANPGMFQRVVIDYYGTPTPITQVAGINVPEARMVVI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
+PY+ + LK+IE AI +SDLG+ P+NDG +IR+ +PQLT ERR+EL K + E+ KV
Sbjct: 68 KPYESNQLKAIEDAIRNSDLGLNPSNDGSIIRVAIPQLTEERRRELVKQAKGKGEDAKVT 127
Query: 219 M 219
+
Sbjct: 128 L 128
>gi|333381307|ref|ZP_08472989.1| ribosome-recycling factor [Dysgonomonas gadei ATCC BAA-286]
gi|332830277|gb|EGK02905.1| ribosome-recycling factor [Dysgonomonas gadei ATCC BAA-286]
Length = 187
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 93/127 (73%)
Query: 91 AEKSSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINT 150
A+ I + + +M+ +++ + + +R G++NP +LD I++EYYGS L +A INT
Sbjct: 3 ADLKQIGQKAEEKMQASVEFLDETLSRIRAGKANPHILDGIKLEYYGSLTPLSGVAAINT 62
Query: 151 PDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAK 210
PD+ +++IQP++K LK +EKAI++SD+G+TP+N+GE+IRL++P LT ERRK+L K +
Sbjct: 63 PDARTIVIQPWEKQMLKEVEKAILNSDVGITPDNNGEIIRLSIPPLTEERRKQLVKQAKQ 122
Query: 211 QAEEGKV 217
+AE+ KV
Sbjct: 123 EAEDAKV 129
>gi|359778924|ref|ZP_09282180.1| ribosome-recycling factor [Arthrobacter globiformis NBRC 12137]
gi|359303791|dbj|GAB16009.1| ribosome-recycling factor [Arthrobacter globiformis NBRC 12137]
Length = 185
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 85/115 (73%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M++ +++ + +F S+RTGR+ P + +K+ VEYYG+P L+ +A PD+ ++LI PYD
Sbjct: 12 KMDKAVEVAKEDFASIRTGRATPGLYNKVMVEYYGTPTPLQQLASFAVPDARTILITPYD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
K++L+ IE+A+ S++G P+NDG VIR+T+P+LT ERRKE K+V + E+ KV
Sbjct: 72 KTALRDIERALSDSEVGANPSNDGNVIRITIPELTKERRKEYVKIVKSKGEDAKV 126
>gi|335996664|ref|ZP_08562581.1| ribosome recycling factor, RRF [Lactobacillus ruminis SPM0211]
gi|347525328|ref|YP_004832076.1| ribosome recycling factor, RRF [Lactobacillus ruminis ATCC 27782]
gi|417974159|ref|ZP_12614982.1| ribosome recycling factor [Lactobacillus ruminis ATCC 25644]
gi|335351734|gb|EGM53225.1| ribosome recycling factor, RRF [Lactobacillus ruminis SPM0211]
gi|345284287|gb|AEN78140.1| ribosome recycling factor, RRF [Lactobacillus ruminis ATCC 27782]
gi|346329486|gb|EGX97782.1| ribosome recycling factor [Lactobacillus ruminis ATCC 25644]
Length = 186
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 84/117 (71%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M++ ++ +R G +N ++L+++ VEYYG+P L +AQI+ P++ LL+ PYD
Sbjct: 13 KMQKAEAALQHELGGIRAGVANASLLNRVMVEYYGAPTPLNQMAQISVPEARVLLVTPYD 72
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
KSSLK +E A+++SDLG+TP NDG IRL +PQLT ERRKEL+K V AE+GKV +
Sbjct: 73 KSSLKDVEHALLASDLGLTPMNDGSAIRLVIPQLTEERRKELAKQVRAAAEKGKVAV 129
>gi|359727256|ref|ZP_09265952.1| ribosome recycling factor [Leptospira weilii str. 2006001855]
gi|417782015|ref|ZP_12429748.1| ribosome recycling factor [Leptospira weilii str. 2006001853]
gi|410777608|gb|EKR62253.1| ribosome recycling factor [Leptospira weilii str. 2006001853]
Length = 184
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 89/120 (74%)
Query: 100 VKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQ 159
+K +M++TID+++ + +VRTGR+NP++++ I V+YYG+ + + I+ P+ L+I
Sbjct: 10 MKTKMDKTIDLLKKDLGTVRTGRANPSLVEDIRVDYYGTLTPINQLGNISVPEPRMLVIS 69
Query: 160 PYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
PYDK +K IEKAI +S LG+ P+NDG VIR+ +P+LT ERRKEL+K+V ++E+ KV +
Sbjct: 70 PYDKGIMKDIEKAIQASGLGLQPSNDGVVIRIVIPELTGERRKELAKIVKSKSEDKKVAI 129
>gi|442804820|ref|YP_007372969.1| ribosome-recycling factor Frr [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442740670|gb|AGC68359.1| ribosome-recycling factor Frr [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 184
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 84/122 (68%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K + +M++T+ +++ ++R GR+NP +LDK+ VEYYG P + +A IN P++ ++
Sbjct: 6 KHITEKMDKTVAILKEELVNIRAGRANPRILDKVTVEYYGVPTPINQLANINVPEARQIV 65
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
IQP+D L IEKAI++S+LG+ PNNDG+VIRL P LT ERR EL+K V K E KV
Sbjct: 66 IQPWDPKILSEIEKAIIASNLGLNPNNDGKVIRLIFPPLTEERRVELTKQVKKVGENAKV 125
Query: 218 VM 219
+
Sbjct: 126 AI 127
>gi|269795652|ref|YP_003315107.1| ribosome recycling factor [Sanguibacter keddieii DSM 10542]
gi|269097837|gb|ACZ22273.1| ribosome recycling factor [Sanguibacter keddieii DSM 10542]
Length = 185
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 85/115 (73%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M++ I++ + F S+RTGR+N AM +I VEYYG+ L+ +A NTP++ ++L+ P+D
Sbjct: 12 KMDKAIEVAKNGFASIRTGRANSAMFSRITVEYYGAQTPLQQLASFNTPEARTILVVPFD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
K++L +IE+A+ SDLG+ P+NDG VIR+ LP LT+ERRKE K+ QAE+ +V
Sbjct: 72 KTALPAIERALRDSDLGVNPSNDGNVIRIVLPVLTAERRKEYVKLAKTQAEDARV 126
>gi|256832239|ref|YP_003160966.1| ribosome recycling factor [Jonesia denitrificans DSM 20603]
gi|256685770|gb|ACV08663.1| ribosome recycling factor [Jonesia denitrificans DSM 20603]
Length = 185
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 85/119 (71%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+ + +M+R +++ + F ++RTGR+N AM KI V+YYG+P L+ +A +N P++ ++LI
Sbjct: 8 EAEEKMDRAVEVAKEEFAAIRTGRANAAMFSKITVDYYGAPTPLQQLASMNIPEARTVLI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
PYDKS++ IEKA+ SDLG+ P+NDG IR+ LP LT ERR++ K+ + EEG+V
Sbjct: 68 SPYDKSAMSLIEKALRDSDLGVNPSNDGNAIRINLPALTEERRRDYVKLAKNKGEEGRV 126
>gi|358465908|ref|ZP_09175793.1| hypothetical protein HMPREF9093_00253 [Fusobacterium sp. oral taxon
370 str. F0437]
gi|357069613|gb|EHI79506.1| hypothetical protein HMPREF9093_00253 [Fusobacterium sp. oral taxon
370 str. F0437]
Length = 190
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 88/122 (72%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K+ + +M +TI+ V+ F S+R GR+N AMLD ++VE YGS L + ++ P++ L+
Sbjct: 10 KECEDKMLKTIESVKERFTSIRAGRANVAMLDAVKVENYGSDAPLNQVGTVSAPEARLLV 69
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
I P+DK+ + IEKAI+++++GMTPNNDG VIRL LP+LT+ERRKE K+ +AE GK+
Sbjct: 70 IDPWDKTLIPKIEKAILAANIGMTPNNDGRVIRLVLPELTAERRKEYVKLAKTEAENGKI 129
Query: 218 VM 219
+
Sbjct: 130 AV 131
>gi|222529797|ref|YP_002573679.1| ribosome recycling factor [Caldicellulosiruptor bescii DSM 6725]
gi|312127157|ref|YP_003992031.1| ribosome recycling factor [Caldicellulosiruptor hydrothermalis 108]
gi|312621978|ref|YP_004023591.1| ribosome recycling factor [Caldicellulosiruptor kronotskyensis
2002]
gi|254809487|sp|B9MKP8.1|RRF_ANATD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|222456644|gb|ACM60906.1| ribosome recycling factor [Caldicellulosiruptor bescii DSM 6725]
gi|311777176|gb|ADQ06662.1| ribosome recycling factor [Caldicellulosiruptor hydrothermalis 108]
gi|312202445|gb|ADQ45772.1| ribosome recycling factor [Caldicellulosiruptor kronotskyensis
2002]
Length = 184
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 82/117 (70%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M++ I+ ++ F ++R GR+NP +LDK+ V+YYG P + +A I P++ ++IQP++
Sbjct: 11 KMKKAIETLKEEFATIRAGRANPHILDKVMVDYYGVPTPIPQVASITVPEARMIVIQPWE 70
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
LK IEKAI SDLG+ P NDG+VIRL P+LT ERRKEL K V K AE+ KV +
Sbjct: 71 ARMLKEIEKAIQKSDLGVNPTNDGKVIRLIFPELTEERRKELVKQVKKMAEDAKVAI 127
>gi|340753408|ref|ZP_08690194.1| ribosome-recycling factor [Fusobacterium sp. 2_1_31]
gi|422315167|ref|ZP_16396606.1| ribosome-recycling factor [Fusobacterium periodonticum D10]
gi|229423000|gb|EEO38047.1| ribosome-recycling factor [Fusobacterium sp. 2_1_31]
gi|404592793|gb|EKA94542.1| ribosome-recycling factor [Fusobacterium periodonticum D10]
Length = 190
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 89/122 (72%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K+ + +M +TI+ V+ F S+R GR+N AMLD ++VE YGS V L + ++ P++ L+
Sbjct: 10 KECEDKMLKTIESVKERFTSIRAGRANVAMLDAVKVENYGSEVPLNQVGSVSAPEARLLV 69
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
+ P+DK+ + IEKA+++++LGMTPNNDG VIRL LP+LT++RRKE K+ +AE GK+
Sbjct: 70 VDPWDKTLIPKIEKALLAANLGMTPNNDGRVIRLVLPELTADRRKEYVKLAKNEAENGKI 129
Query: 218 VM 219
+
Sbjct: 130 AV 131
>gi|269792356|ref|YP_003317260.1| ribosome recycling factor [Thermanaerovibrio acidaminovorans DSM
6589]
gi|269099991|gb|ACZ18978.1| ribosome recycling factor [Thermanaerovibrio acidaminovorans DSM
6589]
Length = 185
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 91/122 (74%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K++K + E+TI+ ++ +RTGR++PA++++I+V+Y+G+ +K + + P+ L+
Sbjct: 7 KEMKQKTEKTIEHLKGTLLGIRTGRAHPALVEEIKVDYFGTMTPIKQMGTVTVPEPRQLV 66
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
I P+DKS+LK+IEKAI SS LG+TP DGE +R+ LP+LT ERR+ELSK+V K AEE +V
Sbjct: 67 ITPWDKSALKAIEKAIQSSSLGVTPKTDGESVRVVLPELTKERRQELSKLVNKYAEEARV 126
Query: 218 VM 219
+
Sbjct: 127 AI 128
>gi|300173184|ref|YP_003772350.1| ribosome Recycling Factor, RRF [Leuconostoc gasicomitatum LMG
18811]
gi|333397948|ref|ZP_08479761.1| ribosome Recycling Factor, RRF [Leuconostoc gelidum KCTC 3527]
gi|406599853|ref|YP_006745199.1| ribosome Recycling Factor, RRF [Leuconostoc gelidum JB7]
gi|299887563|emb|CBL91531.1| Ribosome Recycling Factor, RRF [Leuconostoc gasicomitatum LMG
18811]
gi|406371388|gb|AFS40313.1| ribosome Recycling Factor, RRF [Leuconostoc gelidum JB7]
Length = 181
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/119 (49%), Positives = 85/119 (71%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D K RM+ D ++ S+RTGR+NP +LD+IEVEYYG+ LK +A I+ P++ LLI
Sbjct: 7 DAKTRMQGAQDALKRELGSIRTGRANPHILDRIEVEYYGAMTPLKQVASISVPEARILLI 66
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
P+DKS+L+ I +AI SDLG+ P +DG ++RL +PQ+T E RK+L+K V +AE+ KV
Sbjct: 67 TPFDKSALEEIVRAINMSDLGLNPASDGNIVRLAIPQMTEEGRKDLAKQVKAEAEKAKV 125
>gi|365924994|ref|ZP_09447757.1| ribosome recycling factor [Lactobacillus mali KCTC 3596 = DSM
20444]
gi|420266298|ref|ZP_14768780.1| ribosome recycling factor [Lactobacillus mali KCTC 3596 = DSM
20444]
gi|394425794|gb|EJE98711.1| ribosome recycling factor [Lactobacillus mali KCTC 3596 = DSM
20444]
Length = 187
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/124 (47%), Positives = 89/124 (71%)
Query: 96 IEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSS 155
I K + +M++ + ++ ++R GR+N ++L++I V YYG+P L IAQI+ P++
Sbjct: 7 ILKSAQEKMKKAQEALQRELGNIRAGRANASLLNRIMVVYYGAPTPLNQIAQISIPEARV 66
Query: 156 LLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEG 215
L++ PYDKSSLK IE AI++SDLG++P NDG IRL +PQLT ERRKE++K V +AE+
Sbjct: 67 LMVTPYDKSSLKDIEHAILASDLGISPANDGSAIRLVIPQLTEERRKEIAKEVKAEAEKA 126
Query: 216 KVVM 219
KV +
Sbjct: 127 KVAV 130
>gi|403722362|ref|ZP_10944997.1| ribosome-recycling factor [Gordonia rhizosphera NBRC 16068]
gi|403206674|dbj|GAB89328.1| ribosome-recycling factor [Gordonia rhizosphera NBRC 16068]
Length = 185
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 88/121 (72%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + +ME+ +++ + + ++RTGR+NPAM +K+ +EYYG+ + +A I TP++ ++I
Sbjct: 8 DAEEKMEKAVNVAKEDMGAIRTGRANPAMFNKVHIEYYGAITPITQVASITTPEARLVVI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
+PY+ S+L++IEKAI +SDLG+ P NDG +IR+ +PQLT +RRKEL K + E+ KV
Sbjct: 68 KPYEASTLQAIEKAIRNSDLGVNPTNDGTIIRVAVPQLTEDRRKELVKQAKSKGEDAKVA 127
Query: 219 M 219
+
Sbjct: 128 I 128
>gi|170760155|ref|YP_001787743.1| ribosome recycling factor [Clostridium botulinum A3 str. Loch
Maree]
gi|238688518|sp|B1KWM1.1|RRF_CLOBM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|169407144|gb|ACA55555.1| ribosome recycling factor [Clostridium botulinum A3 str. Loch
Maree]
Length = 184
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/117 (51%), Positives = 84/117 (71%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M ++I ++ S++ GR+NPAMLD+I+ EYYGS L +A I+ P++ LLIQP+D
Sbjct: 12 KMGKSIVALKRELASMKAGRANPAMLDRIDAEYYGSMTPLNQLANISVPEARVLLIQPWD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
KSS+ +IEKAI+ SDLG+ P+NDG VIRL +P+LT E RK + K V K EE KV +
Sbjct: 72 KSSMGAIEKAILKSDLGLNPSNDGTVIRLVIPELTEETRKNIVKTVKKTGEETKVAI 128
>gi|42782915|ref|NP_980162.1| ribosome recycling factor [Bacillus cereus ATCC 10987]
gi|206978510|ref|ZP_03239367.1| ribosome recycling factor [Bacillus cereus H3081.97]
gi|217961244|ref|YP_002339812.1| ribosome recycling factor [Bacillus cereus AH187]
gi|229140465|ref|ZP_04269020.1| Ribosome-recycling factor [Bacillus cereus BDRD-ST26]
gi|229197934|ref|ZP_04324650.1| Ribosome-recycling factor [Bacillus cereus m1293]
gi|375285747|ref|YP_005106186.1| ribosome recycling factor [Bacillus cereus NC7401]
gi|384181637|ref|YP_005567399.1| ribosome recycling factor [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|402556055|ref|YP_006597326.1| ribosome recycling factor [Bacillus cereus FRI-35]
gi|423353526|ref|ZP_17331153.1| ribosome-recycling factor [Bacillus cereus IS075]
gi|423374379|ref|ZP_17351717.1| ribosome-recycling factor [Bacillus cereus AND1407]
gi|423567281|ref|ZP_17543528.1| ribosome-recycling factor [Bacillus cereus MSX-A12]
gi|423574570|ref|ZP_17550689.1| ribosome-recycling factor [Bacillus cereus MSX-D12]
gi|423604549|ref|ZP_17580442.1| ribosome-recycling factor [Bacillus cereus VD102]
gi|60390260|sp|Q732P5.1|RRF_BACC1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|226703254|sp|B7HLF7.1|RRF_BACC7 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|42738842|gb|AAS42770.1| ribosome recycling factor [Bacillus cereus ATCC 10987]
gi|206743279|gb|EDZ54729.1| ribosome recycling factor [Bacillus cereus H3081.97]
gi|217063331|gb|ACJ77581.1| ribosome recycling factor [Bacillus cereus AH187]
gi|228585652|gb|EEK43754.1| Ribosome-recycling factor [Bacillus cereus m1293]
gi|228643026|gb|EEK99302.1| Ribosome-recycling factor [Bacillus cereus BDRD-ST26]
gi|324327721|gb|ADY22981.1| ribosome recycling factor [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|358354274|dbj|BAL19446.1| ribosome recycling factor [Bacillus cereus NC7401]
gi|401089339|gb|EJP97510.1| ribosome-recycling factor [Bacillus cereus IS075]
gi|401094291|gb|EJQ02373.1| ribosome-recycling factor [Bacillus cereus AND1407]
gi|401212095|gb|EJR18841.1| ribosome-recycling factor [Bacillus cereus MSX-D12]
gi|401214369|gb|EJR21099.1| ribosome-recycling factor [Bacillus cereus MSX-A12]
gi|401245169|gb|EJR51527.1| ribosome-recycling factor [Bacillus cereus VD102]
gi|401797265|gb|AFQ11124.1| ribosome recycling factor [Bacillus cereus FRI-35]
Length = 185
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 83/117 (70%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+ME+ + +VR GR+N ++LDK++V+YYG+P + +A I P++ L+IQPYD
Sbjct: 12 KMEKAVAAYSRELATVRAGRANASVLDKVQVDYYGAPTPVVQLANITVPEARLLVIQPYD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
K+S+ IEKAI+ +DLG+ P+NDG VIR+ P LT ERR++L KVV K AEE KV +
Sbjct: 72 KTSIGDIEKAILKADLGLNPSNDGTVIRIAFPALTEERRRDLVKVVKKYAEEAKVAV 128
>gi|348169304|ref|ZP_08876198.1| ribosome recycling factor [Saccharopolyspora spinosa NRRL 18395]
Length = 185
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 85/117 (72%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M++ +++ + +VRTGR+NPAM I V+YYGSP L +A ++ P++ ++I+PYD
Sbjct: 12 KMQKAVEVAKDELATVRTGRANPAMFSGIVVDYYGSPTPLNQLASVSVPEARLVVIKPYD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
S L ++EKAI SDLG+ P+NDG++IR+ +PQ+T ERRKE+ K+ + EEGK+ +
Sbjct: 72 ASQLAAMEKAIRDSDLGVNPSNDGQLIRVAIPQMTEERRKEMVKLAKHKGEEGKITL 128
>gi|345888558|ref|ZP_08839635.1| ribosome-recycling factor [Bilophila sp. 4_1_30]
gi|345040575|gb|EGW44818.1| ribosome-recycling factor [Bilophila sp. 4_1_30]
Length = 186
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 91/128 (71%)
Query: 92 EKSSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTP 151
+K S+ D + RM++ + + +F+ +RTGR++ ++D I+V+YYG+P + +A + P
Sbjct: 2 DKESVLLDSEDRMDKALGALDRDFSRLRTGRASTGLVDNIKVDYYGTPTPISQLASVAIP 61
Query: 152 DSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQ 211
DS ++ IQP+D+ + S+EKAI+ SDLG+TP NDG++IR+++P LT +RRKEL K+ K
Sbjct: 62 DSRTITIQPWDRGAFASVEKAILKSDLGLTPVNDGKIIRISIPPLTEDRRKELGKLARKS 121
Query: 212 AEEGKVVM 219
EE KV +
Sbjct: 122 GEEAKVAV 129
>gi|317059748|ref|ZP_07924233.1| ribosome recycling factor [Fusobacterium sp. 3_1_5R]
gi|313685424|gb|EFS22259.1| ribosome recycling factor [Fusobacterium sp. 3_1_5R]
Length = 189
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 55/117 (47%), Positives = 87/117 (74%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M++TI+ + F S+R GR++ AMLD I+VE YGS + L +A ++ P++ L+I P+D
Sbjct: 14 KMQKTIEATKEKFTSIRAGRASVAMLDNIKVEQYGSDMPLNQVATVSAPEARLLVIDPWD 73
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
K+ + IEKAI++++LGM PNNDG V+RL +P+LT++RRKE K+ K+AE GK+ +
Sbjct: 74 KTMIPKIEKAILAANLGMNPNNDGRVVRLVMPELTADRRKEYVKLAKKEAENGKIAV 130
>gi|354806910|ref|ZP_09040388.1| ribosome recycling factor [Lactobacillus curvatus CRL 705]
gi|354514550|gb|EHE86519.1| ribosome recycling factor [Lactobacillus curvatus CRL 705]
Length = 185
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 58/121 (47%), Positives = 85/121 (70%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+ KA ME+ ++ +R GR+N ++++++ VEYYG+ L IA I P++ LLI
Sbjct: 8 EAKASMEKAEASLQRTLGQIRAGRANASLVNRVNVEYYGAMTPLNQIAAITVPEARVLLI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
PYDK +L+ IEKA+ ++DLG++P NDG VIRL +PQLT ERRKE++K V K+AE GKV
Sbjct: 68 TPYDKGALEDIEKALYTADLGISPANDGSVIRLVIPQLTGERRKEIAKEVGKEAEIGKVA 127
Query: 219 M 219
+
Sbjct: 128 I 128
>gi|352518139|ref|YP_004887456.1| ribosome recycling factor [Tetragenococcus halophilus NBRC 12172]
gi|348602246|dbj|BAK95292.1| ribosome recycling factor [Tetragenococcus halophilus NBRC 12172]
Length = 185
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 82/117 (70%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K ME+ D ++ +R GR+N ++LD++ V YYG P L +A I P++ L+I+P
Sbjct: 10 KENMEKATDNLQYQLGQIRAGRANASLLDRVNVVYYGVPTPLNQLASITIPEARVLMIKP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
+DK+ L+ IEK+I++SD+G+TP NDG V+RL +PQLT ERRKEL+K V K AE KV
Sbjct: 70 FDKTMLQEIEKSILASDVGITPTNDGSVVRLVIPQLTEERRKELAKEVGKDAETAKV 126
>gi|451980473|ref|ZP_21928862.1| Ribosome recycling factor [Nitrospina gracilis 3/211]
gi|451762209|emb|CCQ90094.1| Ribosome recycling factor [Nitrospina gracilis 3/211]
Length = 184
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 90/122 (73%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
KD + +M+ TID + F VRTGR++ A+++ I+VE+YG+P L A ++TPDS ++
Sbjct: 6 KDSERKMKATIDHLHQEFGKVRTGRASVALVEDIKVEFYGNPTPLNQTATLSTPDSRTIS 65
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
I P+D + L IEKAI +SDLG+ P+NDG+VIRL +P LT+ERR++++K+V K AEE K+
Sbjct: 66 IAPWDPTMLPVIEKAISASDLGLNPSNDGKVIRLNIPPLTTERRQQMTKIVRKYAEEAKI 125
Query: 218 VM 219
+
Sbjct: 126 AI 127
>gi|52841939|ref|YP_095738.1| ribosome recycling factor [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|54294594|ref|YP_127009.1| ribosome recycling factor [Legionella pneumophila str. Lens]
gi|148359246|ref|YP_001250453.1| ribosome recycling factor [Legionella pneumophila str. Corby]
gi|296107291|ref|YP_003618991.1| Ribosome recycling factor [Legionella pneumophila 2300/99 Alcoy]
gi|378777573|ref|YP_005186011.1| ribosome recycling factor [Legionella pneumophila subsp.
pneumophila ATCC 43290]
gi|397664160|ref|YP_006505698.1| ribosome recycling factor [Legionella pneumophila subsp.
pneumophila]
gi|397667438|ref|YP_006508975.1| ribosome recycling factor [Legionella pneumophila subsp.
pneumophila]
gi|60390233|sp|Q5WVZ0.1|RRF_LEGPL RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|60390237|sp|Q5ZUT1.1|RRF_LEGPH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|166230796|sp|A5ICK7.1|RRF_LEGPC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|52629050|gb|AAU27791.1| ribosome recycling factor [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|53754426|emb|CAH15910.1| Ribosome recycling factor [Legionella pneumophila str. Lens]
gi|148281019|gb|ABQ55107.1| ribosome recycling factor [Legionella pneumophila str. Corby]
gi|295649192|gb|ADG25039.1| Ribosome recycling factor [Legionella pneumophila 2300/99 Alcoy]
gi|307610406|emb|CBW99976.1| ribosome recycling factor [Legionella pneumophila 130b]
gi|364508388|gb|AEW51912.1| ribosome recycling factor [Legionella pneumophila subsp.
pneumophila ATCC 43290]
gi|395127571|emb|CCD05769.1| ribosome recycling factor [Legionella pneumophila subsp.
pneumophila]
gi|395130849|emb|CCD09098.1| ribosome recycling factor [Legionella pneumophila subsp.
pneumophila]
Length = 185
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 58/124 (46%), Positives = 90/124 (72%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+ I++D + RM++TI+ + T+ + +RTGR+N ++LD + V+YYGSP L +A I T DS
Sbjct: 3 NEIKQDSEKRMKKTIEALHTDMSKIRTGRANASLLDHVMVDYYGSPTPLSQVANITTSDS 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
++L+ P++KS + +IEKAI++SDLG+ P G IR+ +P LT ERRKEL KVV + E
Sbjct: 63 RTILVTPWEKSMVAAIEKAILNSDLGLNPATAGTAIRVPMPPLTEERRKELIKVVRHEGE 122
Query: 214 EGKV 217
+G+V
Sbjct: 123 QGRV 126
>gi|30021912|ref|NP_833543.1| ribosome recycling factor [Bacillus cereus ATCC 14579]
gi|47569102|ref|ZP_00239791.1| ribosome recycling factor [Bacillus cereus G9241]
gi|206972656|ref|ZP_03233597.1| ribosome recycling factor [Bacillus cereus AH1134]
gi|218234587|ref|YP_002368625.1| ribosome recycling factor [Bacillus cereus B4264]
gi|228922578|ref|ZP_04085878.1| Ribosome-recycling factor [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228954100|ref|ZP_04116129.1| Ribosome-recycling factor [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228960040|ref|ZP_04121704.1| Ribosome-recycling factor [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228986967|ref|ZP_04147093.1| Ribosome-recycling factor [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229047510|ref|ZP_04193100.1| Ribosome-recycling factor [Bacillus cereus AH676]
gi|229071322|ref|ZP_04204545.1| Ribosome-recycling factor [Bacillus cereus F65185]
gi|229081079|ref|ZP_04213589.1| Ribosome-recycling factor [Bacillus cereus Rock4-2]
gi|229111295|ref|ZP_04240848.1| Ribosome-recycling factor [Bacillus cereus Rock1-15]
gi|229129100|ref|ZP_04258073.1| Ribosome-recycling factor [Bacillus cereus BDRD-Cer4]
gi|229146395|ref|ZP_04274766.1| Ribosome-recycling factor [Bacillus cereus BDRD-ST24]
gi|229152023|ref|ZP_04280218.1| Ribosome-recycling factor [Bacillus cereus m1550]
gi|229157400|ref|ZP_04285478.1| Ribosome-recycling factor [Bacillus cereus ATCC 4342]
gi|229180100|ref|ZP_04307444.1| Ribosome-recycling factor [Bacillus cereus 172560W]
gi|229191993|ref|ZP_04318963.1| Ribosome-recycling factor [Bacillus cereus ATCC 10876]
gi|296504319|ref|YP_003666019.1| ribosome recycling factor [Bacillus thuringiensis BMB171]
gi|365159399|ref|ZP_09355580.1| ribosome-recycling factor [Bacillus sp. 7_6_55CFAA_CT2]
gi|423412371|ref|ZP_17389491.1| ribosome-recycling factor [Bacillus cereus BAG3O-2]
gi|423425960|ref|ZP_17402991.1| ribosome-recycling factor [Bacillus cereus BAG3X2-2]
gi|423431844|ref|ZP_17408848.1| ribosome-recycling factor [Bacillus cereus BAG4O-1]
gi|423437279|ref|ZP_17414260.1| ribosome-recycling factor [Bacillus cereus BAG4X12-1]
gi|423503499|ref|ZP_17480091.1| ribosome-recycling factor [Bacillus cereus HD73]
gi|423582034|ref|ZP_17558145.1| ribosome-recycling factor [Bacillus cereus VD014]
gi|423585767|ref|ZP_17561854.1| ribosome-recycling factor [Bacillus cereus VD045]
gi|423628917|ref|ZP_17604666.1| ribosome-recycling factor [Bacillus cereus VD154]
gi|423635405|ref|ZP_17611058.1| ribosome-recycling factor [Bacillus cereus VD156]
gi|423641095|ref|ZP_17616713.1| ribosome-recycling factor [Bacillus cereus VD166]
gi|423649687|ref|ZP_17625257.1| ribosome-recycling factor [Bacillus cereus VD169]
gi|423656683|ref|ZP_17631982.1| ribosome-recycling factor [Bacillus cereus VD200]
gi|449090765|ref|YP_007423206.1| ribosome recycling factor [Bacillus thuringiensis serovar kurstaki
str. HD73]
gi|33301535|sp|Q812X4.1|RRF_BACCR RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|226703253|sp|B7HDU7.1|RRF_BACC4 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|29897468|gb|AAP10744.1| Ribosome Recycling Factor (RRF) [Bacillus cereus ATCC 14579]
gi|47554264|gb|EAL12626.1| ribosome recycling factor [Bacillus cereus G9241]
gi|206732413|gb|EDZ49594.1| ribosome recycling factor [Bacillus cereus AH1134]
gi|218162544|gb|ACK62536.1| ribosome recycling factor [Bacillus cereus B4264]
gi|228591544|gb|EEK49393.1| Ribosome-recycling factor [Bacillus cereus ATCC 10876]
gi|228603309|gb|EEK60786.1| Ribosome-recycling factor [Bacillus cereus 172560W]
gi|228626127|gb|EEK82876.1| Ribosome-recycling factor [Bacillus cereus ATCC 4342]
gi|228631372|gb|EEK88006.1| Ribosome-recycling factor [Bacillus cereus m1550]
gi|228637028|gb|EEK93487.1| Ribosome-recycling factor [Bacillus cereus BDRD-ST24]
gi|228654337|gb|EEL10202.1| Ribosome-recycling factor [Bacillus cereus BDRD-Cer4]
gi|228672071|gb|EEL27362.1| Ribosome-recycling factor [Bacillus cereus Rock1-15]
gi|228702123|gb|EEL54599.1| Ribosome-recycling factor [Bacillus cereus Rock4-2]
gi|228711776|gb|EEL63728.1| Ribosome-recycling factor [Bacillus cereus F65185]
gi|228723757|gb|EEL75112.1| Ribosome-recycling factor [Bacillus cereus AH676]
gi|228772745|gb|EEM21185.1| Ribosome-recycling factor [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228799556|gb|EEM46509.1| Ribosome-recycling factor [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228805666|gb|EEM52256.1| Ribosome-recycling factor [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228837007|gb|EEM82348.1| Ribosome-recycling factor [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|296325371|gb|ADH08299.1| ribosome recycling factor [Bacillus thuringiensis BMB171]
gi|363625397|gb|EHL76438.1| ribosome-recycling factor [Bacillus sp. 7_6_55CFAA_CT2]
gi|401104439|gb|EJQ12416.1| ribosome-recycling factor [Bacillus cereus BAG3O-2]
gi|401110707|gb|EJQ18606.1| ribosome-recycling factor [Bacillus cereus BAG3X2-2]
gi|401116600|gb|EJQ24438.1| ribosome-recycling factor [Bacillus cereus BAG4O-1]
gi|401120434|gb|EJQ28230.1| ribosome-recycling factor [Bacillus cereus BAG4X12-1]
gi|401212913|gb|EJR19654.1| ribosome-recycling factor [Bacillus cereus VD014]
gi|401233113|gb|EJR39609.1| ribosome-recycling factor [Bacillus cereus VD045]
gi|401268462|gb|EJR74510.1| ribosome-recycling factor [Bacillus cereus VD154]
gi|401278156|gb|EJR84092.1| ribosome-recycling factor [Bacillus cereus VD156]
gi|401280156|gb|EJR86078.1| ribosome-recycling factor [Bacillus cereus VD166]
gi|401282967|gb|EJR88864.1| ribosome-recycling factor [Bacillus cereus VD169]
gi|401290424|gb|EJR96118.1| ribosome-recycling factor [Bacillus cereus VD200]
gi|402458853|gb|EJV90593.1| ribosome-recycling factor [Bacillus cereus HD73]
gi|449024522|gb|AGE79685.1| ribosome recycling factor [Bacillus thuringiensis serovar kurstaki
str. HD73]
Length = 185
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 83/117 (70%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+ME+ + +VR GR+N ++LDK++V+YYG+P + +A I P++ L+IQPYD
Sbjct: 12 KMEKAVAAYSRELATVRAGRANASVLDKVQVDYYGAPTPVVQLANITVPEARLLVIQPYD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
K+S+ IEKAI+ +DLG+ P+NDG VIR+ P LT ERR++L KVV K AEE KV +
Sbjct: 72 KTSIGDIEKAILKADLGLNPSNDGTVIRIAFPALTEERRRDLVKVVKKYAEEAKVAV 128
>gi|24380004|ref|NP_721959.1| ribosome recycling factor [Streptococcus mutans UA159]
gi|290580017|ref|YP_003484409.1| ribosome recycling factor [Streptococcus mutans NN2025]
gi|387785688|ref|YP_006250784.1| ribosome recycling factor [Streptococcus mutans LJ23]
gi|397650224|ref|YP_006490751.1| ribosome recycling factor [Streptococcus mutans GS-5]
gi|449865320|ref|ZP_21778910.1| ribosome recycling factor [Streptococcus mutans U2B]
gi|449871758|ref|ZP_21781259.1| ribosome recycling factor [Streptococcus mutans 8ID3]
gi|449877293|ref|ZP_21783189.1| ribosome recycling factor [Streptococcus mutans S1B]
gi|449883270|ref|ZP_21785047.1| ribosome recycling factor [Streptococcus mutans SA38]
gi|449885627|ref|ZP_21785696.1| ribosome recycling factor [Streptococcus mutans SA41]
gi|449894266|ref|ZP_21789142.1| ribosome recycling factor [Streptococcus mutans SF12]
gi|449896759|ref|ZP_21789919.1| ribosome recycling factor [Streptococcus mutans R221]
gi|449902396|ref|ZP_21791545.1| ribosome recycling factor [Streptococcus mutans M230]
gi|449910024|ref|ZP_21794487.1| ribosome recycling factor [Streptococcus mutans OMZ175]
gi|449916549|ref|ZP_21796922.1| ribosome recycling factor [Streptococcus mutans 15JP3]
gi|449919886|ref|ZP_21798199.1| ribosome recycling factor [Streptococcus mutans 1SM1]
gi|449926831|ref|ZP_21800944.1| ribosome recycling factor [Streptococcus mutans 4SM1]
gi|449929266|ref|ZP_21801496.1| ribosome recycling factor [Streptococcus mutans 3SN1]
gi|449935831|ref|ZP_21803646.1| ribosome recycling factor [Streptococcus mutans 2ST1]
gi|449941860|ref|ZP_21805724.1| ribosome recycling factor [Streptococcus mutans 11A1]
gi|449951157|ref|ZP_21808538.1| ribosome recycling factor [Streptococcus mutans 11SSST2]
gi|449953339|ref|ZP_21808966.1| ribosome recycling factor [Streptococcus mutans 4VF1]
gi|449966404|ref|ZP_21812350.1| ribosome recycling factor [Streptococcus mutans 15VF2]
gi|449972131|ref|ZP_21814676.1| ribosome recycling factor [Streptococcus mutans 2VS1]
gi|449975755|ref|ZP_21815971.1| ribosome recycling factor [Streptococcus mutans 11VS1]
gi|449979692|ref|ZP_21816839.1| ribosome recycling factor [Streptococcus mutans 5SM3]
gi|449984565|ref|ZP_21819140.1| ribosome recycling factor [Streptococcus mutans NFSM2]
gi|449991701|ref|ZP_21822022.1| ribosome recycling factor [Streptococcus mutans NVAB]
gi|449994618|ref|ZP_21822611.1| ribosome recycling factor [Streptococcus mutans A9]
gi|450001521|ref|ZP_21825703.1| ribosome recycling factor [Streptococcus mutans N29]
gi|450005295|ref|ZP_21826596.1| ribosome recycling factor [Streptococcus mutans NMT4863]
gi|450010778|ref|ZP_21828786.1| ribosome recycling factor [Streptococcus mutans A19]
gi|450023892|ref|ZP_21830909.1| ribosome recycling factor [Streptococcus mutans U138]
gi|450030148|ref|ZP_21833090.1| ribosome recycling factor [Streptococcus mutans G123]
gi|450039287|ref|ZP_21836166.1| ribosome recycling factor [Streptococcus mutans T4]
gi|450050380|ref|ZP_21840248.1| ribosome recycling factor [Streptococcus mutans NFSM1]
gi|450056419|ref|ZP_21842036.1| ribosome recycling factor [Streptococcus mutans NLML4]
gi|450062947|ref|ZP_21844668.1| ribosome recycling factor [Streptococcus mutans NLML5]
gi|450067488|ref|ZP_21846675.1| ribosome recycling factor [Streptococcus mutans NLML9]
gi|450071117|ref|ZP_21847972.1| ribosome recycling factor [Streptococcus mutans M2A]
gi|450076171|ref|ZP_21849736.1| ribosome recycling factor [Streptococcus mutans N3209]
gi|450083566|ref|ZP_21852982.1| ribosome recycling factor [Streptococcus mutans N66]
gi|450086714|ref|ZP_21853847.1| ribosome recycling factor [Streptococcus mutans NV1996]
gi|450091426|ref|ZP_21855492.1| ribosome recycling factor [Streptococcus mutans W6]
gi|450097597|ref|ZP_21857551.1| ribosome recycling factor [Streptococcus mutans SF1]
gi|450105335|ref|ZP_21859847.1| ribosome recycling factor [Streptococcus mutans SF14]
gi|450114906|ref|ZP_21863597.1| ribosome recycling factor [Streptococcus mutans ST1]
gi|450119893|ref|ZP_21865352.1| ribosome recycling factor [Streptococcus mutans ST6]
gi|450127716|ref|ZP_21868692.1| ribosome recycling factor [Streptococcus mutans U2A]
gi|450132957|ref|ZP_21870402.1| ribosome recycling factor [Streptococcus mutans NLML8]
gi|450137478|ref|ZP_21871687.1| ribosome recycling factor [Streptococcus mutans NLML1]
gi|450144576|ref|ZP_21874097.1| ribosome recycling factor [Streptococcus mutans 1ID3]
gi|450150640|ref|ZP_21876675.1| ribosome recycling factor [Streptococcus mutans 14D]
gi|450154435|ref|ZP_21877723.1| ribosome recycling factor [Streptococcus mutans 21]
gi|450160530|ref|ZP_21880075.1| ribosome recycling factor [Streptococcus mutans 66-2A]
gi|450164792|ref|ZP_21881514.1| ribosome recycling factor [Streptococcus mutans B]
gi|450170118|ref|ZP_21883356.1| ribosome recycling factor [Streptococcus mutans SM4]
gi|450175201|ref|ZP_21885029.1| ribosome recycling factor [Streptococcus mutans SM1]
gi|450181972|ref|ZP_21888071.1| ribosome recycling factor [Streptococcus mutans 24]
gi|34924954|sp|Q8DSY2.1|RRF_STRMU RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|24377992|gb|AAN59265.1|AE014993_9 putative ribosome recycling factor [Streptococcus mutans UA159]
gi|254996916|dbj|BAH87517.1| putative ribosome recycling factor [Streptococcus mutans NN2025]
gi|379132089|dbj|BAL68841.1| ribosome recycling factor [Streptococcus mutans LJ23]
gi|392603793|gb|AFM81957.1| ribosome recycling factor [Streptococcus mutans GS-5]
gi|449150419|gb|EMB54184.1| ribosome recycling factor [Streptococcus mutans 1ID3]
gi|449151638|gb|EMB55366.1| ribosome recycling factor [Streptococcus mutans 11A1]
gi|449152206|gb|EMB55918.1| ribosome recycling factor [Streptococcus mutans NLML8]
gi|449155096|gb|EMB58628.1| ribosome recycling factor [Streptococcus mutans 8ID3]
gi|449155147|gb|EMB58677.1| ribosome recycling factor [Streptococcus mutans 15JP3]
gi|449159077|gb|EMB62456.1| ribosome recycling factor [Streptococcus mutans 1SM1]
gi|449160226|gb|EMB63503.1| ribosome recycling factor [Streptococcus mutans 4SM1]
gi|449164733|gb|EMB67778.1| ribosome recycling factor [Streptococcus mutans 3SN1]
gi|449166181|gb|EMB69136.1| ribosome recycling factor [Streptococcus mutans 2ST1]
gi|449166514|gb|EMB69448.1| ribosome recycling factor [Streptococcus mutans 11SSST2]
gi|449170168|gb|EMB72900.1| ribosome recycling factor [Streptococcus mutans 15VF2]
gi|449171185|gb|EMB73860.1| ribosome recycling factor [Streptococcus mutans 2VS1]
gi|449172052|gb|EMB74693.1| ribosome recycling factor [Streptococcus mutans 4VF1]
gi|449176464|gb|EMB78810.1| ribosome recycling factor [Streptococcus mutans 11VS1]
gi|449177618|gb|EMB79910.1| ribosome recycling factor [Streptococcus mutans 5SM3]
gi|449180144|gb|EMB82320.1| ribosome recycling factor [Streptococcus mutans NFSM2]
gi|449180808|gb|EMB82946.1| ribosome recycling factor [Streptococcus mutans NVAB]
gi|449184486|gb|EMB86430.1| ribosome recycling factor [Streptococcus mutans N29]
gi|449185124|gb|EMB87026.1| ribosome recycling factor [Streptococcus mutans A9]
gi|449188713|gb|EMB90410.1| ribosome recycling factor [Streptococcus mutans NMT4863]
gi|449189977|gb|EMB91590.1| ribosome recycling factor [Streptococcus mutans A19]
gi|449192699|gb|EMB94107.1| ribosome recycling factor [Streptococcus mutans U138]
gi|449193277|gb|EMB94666.1| ribosome recycling factor [Streptococcus mutans G123]
gi|449200626|gb|EMC01650.1| ribosome recycling factor [Streptococcus mutans T4]
gi|449202733|gb|EMC03630.1| ribosome recycling factor [Streptococcus mutans NFSM1]
gi|449205214|gb|EMC05971.1| ribosome recycling factor [Streptococcus mutans NLML5]
gi|449206789|gb|EMC07482.1| ribosome recycling factor [Streptococcus mutans NLML4]
gi|449208047|gb|EMC08683.1| ribosome recycling factor [Streptococcus mutans NLML9]
gi|449212742|gb|EMC13094.1| ribosome recycling factor [Streptococcus mutans M2A]
gi|449212968|gb|EMC13316.1| ribosome recycling factor [Streptococcus mutans N3209]
gi|449212970|gb|EMC13317.1| ribosome recycling factor [Streptococcus mutans N66]
gi|449219155|gb|EMC19133.1| ribosome recycling factor [Streptococcus mutans NV1996]
gi|449219382|gb|EMC19351.1| ribosome recycling factor [Streptococcus mutans W6]
gi|449222561|gb|EMC22285.1| ribosome recycling factor [Streptococcus mutans SF1]
gi|449224936|gb|EMC24560.1| ribosome recycling factor [Streptococcus mutans SF14]
gi|449228587|gb|EMC27947.1| ribosome recycling factor [Streptococcus mutans ST1]
gi|449230336|gb|EMC29598.1| ribosome recycling factor [Streptococcus mutans U2A]
gi|449230891|gb|EMC30133.1| ribosome recycling factor [Streptococcus mutans ST6]
gi|449233269|gb|EMC32346.1| ribosome recycling factor [Streptococcus mutans 14D]
gi|449235259|gb|EMC34227.1| ribosome recycling factor [Streptococcus mutans NLML1]
gi|449237807|gb|EMC36611.1| ribosome recycling factor [Streptococcus mutans 21]
gi|449239905|gb|EMC38605.1| ribosome recycling factor [Streptococcus mutans 66-2A]
gi|449241332|gb|EMC39965.1| ribosome recycling factor [Streptococcus mutans B]
gi|449245414|gb|EMC43751.1| ribosome recycling factor [Streptococcus mutans 24]
gi|449246212|gb|EMC44523.1| ribosome recycling factor [Streptococcus mutans SM4]
gi|449247274|gb|EMC45559.1| ribosome recycling factor [Streptococcus mutans SM1]
gi|449250135|gb|EMC48214.1| ribosome recycling factor [Streptococcus mutans SA38]
gi|449251041|gb|EMC49072.1| ribosome recycling factor [Streptococcus mutans S1B]
gi|449255038|gb|EMC52917.1| ribosome recycling factor [Streptococcus mutans SA41]
gi|449255393|gb|EMC53248.1| ribosome recycling factor [Streptococcus mutans SF12]
gi|449260436|gb|EMC57936.1| ribosome recycling factor [Streptococcus mutans OMZ175]
gi|449261724|gb|EMC59190.1| ribosome recycling factor [Streptococcus mutans R221]
gi|449262794|gb|EMC60235.1| ribosome recycling factor [Streptococcus mutans M230]
gi|449264307|gb|EMC61652.1| ribosome recycling factor [Streptococcus mutans U2B]
Length = 185
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/126 (49%), Positives = 84/126 (66%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
++I + K R E++ + F S+R GR+N ++LD+IEVEYYG P L +A I P++
Sbjct: 3 NAIVEKAKERFEQSHQSLAREFGSIRAGRANASLLDRIEVEYYGVPTPLNQLASITVPEA 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
LL+ P+DKSSLK IE AI +SD+G+ P NDG VIRL +P LT E RKEL+K V K E
Sbjct: 63 RVLLVSPFDKSSLKDIEHAINASDIGINPANDGSVIRLVIPALTEETRKELAKEVKKVGE 122
Query: 214 EGKVVM 219
KV +
Sbjct: 123 NAKVAI 128
>gi|325290374|ref|YP_004266555.1| ribosome recycling factor [Syntrophobotulus glycolicus DSM 8271]
gi|324965775|gb|ADY56554.1| ribosome recycling factor [Syntrophobotulus glycolicus DSM 8271]
Length = 185
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 92/124 (74%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+I K+ + +M++T++++R F ++R G +N +MLDKI V+YYG+P + +A I+ P+
Sbjct: 3 DTIVKETEEKMKKTLEVLRKEFVTIRAGSANQSMLDKIMVDYYGTPTPINQVANISVPEP 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
L+IQP++K+ ++ +EKAI+ SDLG+ P NDG V+RL +PQLT++RR E+ + V K+AE
Sbjct: 63 RMLVIQPWEKTMIQPVEKAIMKSDLGINPVNDGSVVRLVIPQLTADRRTEIVRTVKKKAE 122
Query: 214 EGKV 217
E +V
Sbjct: 123 EARV 126
>gi|392989246|ref|YP_006487839.1| ribosome recycling factor [Enterococcus hirae ATCC 9790]
gi|392336666|gb|AFM70948.1| ribosome recycling factor [Enterococcus hirae ATCC 9790]
Length = 185
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 87/126 (69%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+I + K +M++ ++ +R GR+N ++LD+I V YYG+P L +A I P++
Sbjct: 3 DAIMTEAKEKMQKAAQNLQRELGQIRAGRANASLLDRITVNYYGAPTPLNQMASIQIPEA 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
L+I P+DKS L+ +EKAI++SD+G++P NDG VIRL +PQLT ERRKEL+K V K+AE
Sbjct: 63 RVLMITPFDKSILQDVEKAIMASDIGISPTNDGNVIRLIIPQLTEERRKELAKDVKKEAE 122
Query: 214 EGKVVM 219
K+ +
Sbjct: 123 NAKIAV 128
>gi|291550817|emb|CBL27079.1| ribosome recycling factor [Ruminococcus torques L2-14]
Length = 183
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 91/128 (71%), Gaps = 3/128 (2%)
Query: 92 EKSSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTP 151
EK+ I D +M +TI+ + ++R GR+NP +LDK+ V+YYG+P ++ +A ++ P
Sbjct: 3 EKNKIYDD---KMTKTINNLDGELATIRAGRANPHVLDKLAVDYYGTPTPIQQVANVSVP 59
Query: 152 DSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQ 211
++ + IQP++KS LK+IEKAI++SD+G+ P NDG IRL P+LT +RRKEL+K V K+
Sbjct: 60 EARMIQIQPWEKSMLKAIEKAILTSDIGINPTNDGTSIRLVFPELTEDRRKELAKDVKKK 119
Query: 212 AEEGKVVM 219
EE KV +
Sbjct: 120 GEEAKVAV 127
>gi|260654918|ref|ZP_05860406.1| ribosome recycling factor [Jonquetella anthropi E3_33 E1]
gi|424844784|ref|ZP_18269395.1| ribosome recycling factor [Jonquetella anthropi DSM 22815]
gi|260630420|gb|EEX48614.1| ribosome recycling factor [Jonquetella anthropi E3_33 E1]
gi|363986222|gb|EHM13052.1| ribosome recycling factor [Jonquetella anthropi DSM 22815]
Length = 183
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 90/121 (74%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
DVK M++ ID + F +RTGR++P ++ ++ +YYG+P LK +A ++ D+ +L I
Sbjct: 5 DVKTPMQKVIDHMNGEFLGIRTGRAHPGLVGDVKADYYGTPTPLKQMATVSVLDARTLQI 64
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
PYD++++K+IEKAI+++++G+TP DG+VIRL++P+LT ERRKEL K V+K EE K+
Sbjct: 65 TPYDQTAVKTIEKAILAANIGVTPVVDGKVIRLSMPELTGERRKELCKYVSKLGEEAKIA 124
Query: 219 M 219
+
Sbjct: 125 L 125
>gi|326389448|ref|ZP_08211015.1| ribosome recycling factor [Thermoanaerobacter ethanolicus JW 200]
gi|345017715|ref|YP_004820068.1| ribosome-recycling factor [Thermoanaerobacter wiegelii Rt8.B1]
gi|325994453|gb|EGD52878.1| ribosome recycling factor [Thermoanaerobacter ethanolicus JW 200]
gi|344033058|gb|AEM78784.1| Ribosome-recycling factor [Thermoanaerobacter wiegelii Rt8.B1]
Length = 184
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 85/117 (72%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M++++ +++ ++R GR+NPA+LD+I V+YYG+P L +A I P+ L++QP+D
Sbjct: 11 KMQKSLSVLKNELAAIRAGRANPALLDRIMVDYYGTPTPLNRLATITAPEPRVLVVQPWD 70
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
S + IEKAI SDLG+ P +DG+V+RL P+LT ERRKEL K+V K+AEE KV +
Sbjct: 71 VSKISDIEKAIQKSDLGINPVSDGKVLRLVFPELTEERRKELVKLVHKKAEEAKVAV 127
>gi|167037634|ref|YP_001665212.1| ribosome recycling factor [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|167040295|ref|YP_001663280.1| ribosome recycling factor [Thermoanaerobacter sp. X514]
gi|256750775|ref|ZP_05491660.1| ribosome recycling factor [Thermoanaerobacter ethanolicus CCSD1]
gi|300914379|ref|ZP_07131695.1| ribosome recycling factor [Thermoanaerobacter sp. X561]
gi|307724385|ref|YP_003904136.1| ribosome recycling factor [Thermoanaerobacter sp. X513]
gi|320116049|ref|YP_004186208.1| ribosome recycling factor [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|238687580|sp|B0K1P6.1|RRF_THEPX RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|238687714|sp|B0K9R3.1|RRF_THEP3 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|166854535|gb|ABY92944.1| ribosome recycling factor [Thermoanaerobacter sp. X514]
gi|166856468|gb|ABY94876.1| ribosome recycling factor [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|256750358|gb|EEU63377.1| ribosome recycling factor [Thermoanaerobacter ethanolicus CCSD1]
gi|300889314|gb|EFK84460.1| ribosome recycling factor [Thermoanaerobacter sp. X561]
gi|307581446|gb|ADN54845.1| ribosome recycling factor [Thermoanaerobacter sp. X513]
gi|319929140|gb|ADV79825.1| ribosome recycling factor [Thermoanaerobacter brockii subsp. finnii
Ako-1]
Length = 184
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 85/117 (72%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M++++ +++ ++R GR+NPA+LD+I V+YYG+P L +A I P+ L++QP+D
Sbjct: 11 KMQKSLSVLKNELAAIRAGRANPALLDRIMVDYYGTPTPLNRLATITAPEPRVLVVQPWD 70
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
S + IEKAI SDLG+ P +DG+V+RL P+LT ERRKEL K+V K+AEE KV +
Sbjct: 71 VSKISDIEKAIQKSDLGINPVSDGKVLRLVFPELTEERRKELVKLVHKKAEEAKVAV 127
>gi|28210950|ref|NP_781894.1| ribosome recycling factor [Clostridium tetani E88]
gi|34924948|sp|Q895K9.1|RRF_CLOTE RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|28203389|gb|AAO35831.1| ribosome recycling factor [Clostridium tetani E88]
Length = 183
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 84/117 (71%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M + + ++ + S++ GR+NPAMLDKIE EYYG+ L +A I+ P++ L IQP+D
Sbjct: 12 KMSKALLALKKDLASLKAGRANPAMLDKIEAEYYGTMTPLSQLANISVPEARILQIQPWD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
KSSLK+IEKAI+ SDLG+ PNNDG +IRL +P+LT E R+ + K V K E+ K+ +
Sbjct: 72 KSSLKAIEKAILVSDLGLNPNNDGTIIRLIIPELTEETRRNIVKTVKKYGEDTKIAI 128
>gi|405981535|ref|ZP_11039862.1| ribosome recycling factor [Actinomyces neuii BVS029A5]
gi|404392459|gb|EJZ87519.1| ribosome recycling factor [Actinomyces neuii BVS029A5]
Length = 185
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 87/121 (71%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + RM++ + R F+++RTGR+N +M D I+V+YYG+P L+ +A N P++ ++++
Sbjct: 8 DCENRMKKALAFTREEFSNIRTGRANTSMFDSIQVDYYGAPTPLQQLASFNIPEARTVIV 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
P+DK ++ +I KAI SDLG+ P +DG++IR+TLP LT ERRKE K+ +AEEG++
Sbjct: 68 NPFDKGAMDAIIKAIRESDLGVNPTDDGKIIRVTLPALTEERRKEYVKLAKTKAEEGRIA 127
Query: 219 M 219
+
Sbjct: 128 V 128
>gi|450036172|ref|ZP_21835389.1| ribosome recycling factor [Streptococcus mutans M21]
gi|450111542|ref|ZP_21862769.1| ribosome recycling factor [Streptococcus mutans SM6]
gi|449194558|gb|EMB95912.1| ribosome recycling factor [Streptococcus mutans M21]
gi|449223789|gb|EMC23460.1| ribosome recycling factor [Streptococcus mutans SM6]
Length = 185
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/126 (49%), Positives = 84/126 (66%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
++I + K R E++ + F S+R GR+N ++LD+IEVEYYG P L +A I P++
Sbjct: 3 NAIVEKAKERFEQSHQSLAREFGSIRAGRANASLLDRIEVEYYGVPTPLNQLASITVPEA 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
LL+ P+DKSSLK IE AI +SD+G+ P NDG VIRL +P LT E RKEL+K V K E
Sbjct: 63 RVLLVSPFDKSSLKDIEHAINASDIGINPANDGSVIRLVIPALTEETRKELAKEVKKVGE 122
Query: 214 EGKVVM 219
KV +
Sbjct: 123 NAKVAI 128
>gi|315918326|ref|ZP_07914566.1| ribosome recycling factor [Fusobacterium gonidiaformans ATCC 25563]
gi|313692201|gb|EFS29036.1| ribosome recycling factor [Fusobacterium gonidiaformans ATCC 25563]
Length = 189
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 55/117 (47%), Positives = 87/117 (74%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M++TI+ + F S+R GR++ AMLD I+VE YGS + L +A ++ P++ L+I P+D
Sbjct: 14 KMQKTIEATKEKFTSIRAGRASVAMLDNIKVEQYGSDMPLNQVATVSAPEARLLVIDPWD 73
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
K+ + IEKAI++++LGM PNNDG V+RL +P+LT++RRKE K+ K+AE GK+ +
Sbjct: 74 KTMILKIEKAILAANLGMNPNNDGRVVRLVMPELTADRRKEYVKLAKKEAENGKIAV 130
>gi|444910050|ref|ZP_21230238.1| Ribosome recycling factor [Cystobacter fuscus DSM 2262]
gi|444719648|gb|ELW60440.1| Ribosome recycling factor [Cystobacter fuscus DSM 2262]
Length = 184
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 58/121 (47%), Positives = 87/121 (71%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D+K+R+++T+D ++ VRTGR++P +LD I V+YYG+P L +A I +P+ ++I
Sbjct: 7 DLKSRIDKTLDDLKKELTKVRTGRASPNLLDGIRVDYYGTPTPLSGVANITSPEPRLIII 66
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
+P++KS LK IEKAI ++LG+ P NDGEVIRL P LT ERRKE++K V + E+ KV
Sbjct: 67 KPWEKSVLKDIEKAIREANLGINPMNDGEVIRLPFPPLTEERRKEIAKQVKTKGEDHKVA 126
Query: 219 M 219
+
Sbjct: 127 I 127
>gi|227551763|ref|ZP_03981812.1| ribosome recycling factor [Enterococcus faecium TX1330]
gi|257878533|ref|ZP_05658186.1| ribosome recycling factor [Enterococcus faecium 1,230,933]
gi|257883168|ref|ZP_05662821.1| ribosome recycling factor [Enterococcus faecium 1,231,502]
gi|257884335|ref|ZP_05663988.1| ribosome recycling factor [Enterococcus faecium 1,231,501]
gi|257887076|ref|ZP_05666729.1| ribosome recycling factor [Enterococcus faecium 1,141,733]
gi|257889270|ref|ZP_05668923.1| ribosome recycling factor [Enterococcus faecium 1,231,410]
gi|257895641|ref|ZP_05675294.1| ribosome recycling factor [Enterococcus faecium Com12]
gi|257898231|ref|ZP_05677884.1| ribosome recycling factor [Enterococcus faecium Com15]
gi|260560118|ref|ZP_05832296.1| ribosome recycling factor [Enterococcus faecium C68]
gi|261208147|ref|ZP_05922821.1| ribosome recycling factor [Enterococcus faecium TC 6]
gi|289566196|ref|ZP_06446629.1| ribosome recycling factor [Enterococcus faecium D344SRF]
gi|293377748|ref|ZP_06623937.1| ribosome recycling factor [Enterococcus faecium PC4.1]
gi|293556642|ref|ZP_06675207.1| ribosome recycling factor [Enterococcus faecium E1039]
gi|293560147|ref|ZP_06676650.1| ribosome recycling factor [Enterococcus faecium E1162]
gi|293567410|ref|ZP_06678757.1| ribosome recycling factor [Enterococcus faecium E1071]
gi|293570620|ref|ZP_06681671.1| ribosome recycling factor [Enterococcus faecium E980]
gi|294613944|ref|ZP_06693879.1| ribosome recycling factor [Enterococcus faecium E1636]
gi|294620329|ref|ZP_06699645.1| ribosome recycling factor [Enterococcus faecium E1679]
gi|294620756|ref|ZP_06699963.1| ribosome recycling factor [Enterococcus faecium U0317]
gi|314937498|ref|ZP_07844831.1| ribosome recycling factor [Enterococcus faecium TX0133a04]
gi|314942157|ref|ZP_07849011.1| ribosome recycling factor [Enterococcus faecium TX0133C]
gi|314947503|ref|ZP_07850918.1| ribosome recycling factor [Enterococcus faecium TX0082]
gi|314951490|ref|ZP_07854539.1| ribosome recycling factor [Enterococcus faecium TX0133A]
gi|314992580|ref|ZP_07857998.1| ribosome recycling factor [Enterococcus faecium TX0133B]
gi|314995485|ref|ZP_07860585.1| ribosome recycling factor [Enterococcus faecium TX0133a01]
gi|383329043|ref|YP_005354927.1| ribosome recycling factor [Enterococcus faecium Aus0004]
gi|389868866|ref|YP_006376289.1| ribosome recycling factor [Enterococcus faecium DO]
gi|406580781|ref|ZP_11055970.1| ribosome recycling factor [Enterococcus sp. GMD4E]
gi|406583394|ref|ZP_11058468.1| ribosome recycling factor [Enterococcus sp. GMD3E]
gi|406585399|ref|ZP_11060389.1| ribosome recycling factor [Enterococcus sp. GMD2E]
gi|406590576|ref|ZP_11064939.1| ribosome recycling factor [Enterococcus sp. GMD1E]
gi|410937304|ref|ZP_11369165.1| ribosome recycling factor [Enterococcus sp. GMD5E]
gi|415899572|ref|ZP_11551637.1| ribosome recycling factor [Enterococcus faecium E4453]
gi|416141214|ref|ZP_11599351.1| ribosome recycling factor [Enterococcus faecium E4452]
gi|424766476|ref|ZP_18193829.1| ribosome recycling factor [Enterococcus faecalis TX1337RF]
gi|424789287|ref|ZP_18215962.1| ribosome recycling factor [Enterococcus faecium V689]
gi|424797614|ref|ZP_18223191.1| ribosome recycling factor [Enterococcus faecium S447]
gi|424834693|ref|ZP_18259390.1| ribosome recycling factor [Enterococcus faecium R501]
gi|424858792|ref|ZP_18282821.1| ribosome recycling factor [Enterococcus faecium R499]
gi|424864997|ref|ZP_18288883.1| ribosome recycling factor [Enterococcus faecium R497]
gi|424945246|ref|ZP_18360954.1| ribosome recycling factor [Enterococcus faecium R496]
gi|424955123|ref|ZP_18369982.1| ribosome recycling factor [Enterococcus faecium R494]
gi|424958136|ref|ZP_18372802.1| ribosome recycling factor [Enterococcus faecium R446]
gi|424961848|ref|ZP_18376262.1| ribosome recycling factor [Enterococcus faecium P1986]
gi|424964221|ref|ZP_18378336.1| ribosome recycling factor [Enterococcus faecium P1190]
gi|424967997|ref|ZP_18381661.1| ribosome recycling factor [Enterococcus faecium P1140]
gi|424969985|ref|ZP_18383527.1| ribosome recycling factor [Enterococcus faecium P1139]
gi|424973427|ref|ZP_18386705.1| ribosome recycling factor [Enterococcus faecium P1137]
gi|424976817|ref|ZP_18389881.1| ribosome recycling factor [Enterococcus faecium P1123]
gi|424981141|ref|ZP_18393892.1| ribosome recycling factor [Enterococcus faecium ERV99]
gi|424983745|ref|ZP_18396318.1| ribosome recycling factor [Enterococcus faecium ERV69]
gi|424988607|ref|ZP_18400919.1| ribosome recycling factor [Enterococcus faecium ERV38]
gi|424992634|ref|ZP_18404682.1| ribosome recycling factor [Enterococcus faecium ERV26]
gi|424993468|ref|ZP_18405460.1| ribosome recycling factor [Enterococcus faecium ERV168]
gi|424997756|ref|ZP_18409496.1| ribosome recycling factor [Enterococcus faecium ERV165]
gi|425002096|ref|ZP_18413555.1| ribosome recycling factor [Enterococcus faecium ERV161]
gi|425003796|ref|ZP_18415136.1| ribosome recycling factor [Enterococcus faecium ERV102]
gi|425007593|ref|ZP_18418714.1| ribosome recycling factor [Enterococcus faecium ERV1]
gi|425011871|ref|ZP_18422730.1| ribosome recycling factor [Enterococcus faecium E422]
gi|425014959|ref|ZP_18425603.1| ribosome recycling factor [Enterococcus faecium E417]
gi|425018287|ref|ZP_18428742.1| ribosome recycling factor [Enterococcus faecium C621]
gi|425019916|ref|ZP_18430248.1| ribosome recycling factor [Enterococcus faecium C497]
gi|425025814|ref|ZP_18434702.1| ribosome recycling factor [Enterococcus faecium C1904]
gi|425031950|ref|ZP_18437043.1| ribosome recycling factor [Enterococcus faecium 515]
gi|425034609|ref|ZP_18439490.1| ribosome recycling factor [Enterococcus faecium 514]
gi|425039306|ref|ZP_18443858.1| ribosome recycling factor [Enterococcus faecium 513]
gi|425040720|ref|ZP_18445172.1| ribosome recycling factor [Enterococcus faecium 511]
gi|425045080|ref|ZP_18449202.1| ribosome recycling factor [Enterococcus faecium 510]
gi|425048193|ref|ZP_18452114.1| ribosome recycling factor [Enterococcus faecium 509]
gi|425052078|ref|ZP_18455709.1| ribosome recycling factor [Enterococcus faecium 506]
gi|425054647|ref|ZP_18458152.1| ribosome recycling factor [Enterococcus faecium 505]
gi|425059517|ref|ZP_18462853.1| ribosome recycling factor [Enterococcus faecium 504]
gi|425059592|ref|ZP_18462923.1| ribosome recycling factor [Enterococcus faecium 503]
gi|427396285|ref|ZP_18889044.1| ribosome-recycling factor [Enterococcus durans FB129-CNAB-4]
gi|430819857|ref|ZP_19438501.1| ribosome-recycling factor [Enterococcus faecium E0045]
gi|430822632|ref|ZP_19441210.1| ribosome-recycling factor [Enterococcus faecium E0120]
gi|430825597|ref|ZP_19443801.1| ribosome-recycling factor [Enterococcus faecium E0164]
gi|430827730|ref|ZP_19445862.1| ribosome-recycling factor [Enterococcus faecium E0269]
gi|430830816|ref|ZP_19448872.1| ribosome-recycling factor [Enterococcus faecium E0333]
gi|430832981|ref|ZP_19450994.1| ribosome-recycling factor [Enterococcus faecium E0679]
gi|430838219|ref|ZP_19456167.1| ribosome-recycling factor [Enterococcus faecium E0688]
gi|430841502|ref|ZP_19459421.1| ribosome-recycling factor [Enterococcus faecium E1007]
gi|430843932|ref|ZP_19461830.1| ribosome-recycling factor [Enterococcus faecium E1050]
gi|430845931|ref|ZP_19463796.1| ribosome-recycling factor [Enterococcus faecium E1133]
gi|430849577|ref|ZP_19467350.1| ribosome-recycling factor [Enterococcus faecium E1185]
gi|430851774|ref|ZP_19469509.1| ribosome-recycling factor [Enterococcus faecium E1258]
gi|430854924|ref|ZP_19472635.1| ribosome-recycling factor [Enterococcus faecium E1392]
gi|430858027|ref|ZP_19475656.1| ribosome-recycling factor [Enterococcus faecium E1552]
gi|430860309|ref|ZP_19477913.1| ribosome-recycling factor [Enterococcus faecium E1573]
gi|430865192|ref|ZP_19480950.1| ribosome-recycling factor [Enterococcus faecium E1574]
gi|430949037|ref|ZP_19485956.1| ribosome-recycling factor [Enterococcus faecium E1576]
gi|431005360|ref|ZP_19489006.1| ribosome-recycling factor [Enterococcus faecium E1578]
gi|431033133|ref|ZP_19490979.1| ribosome-recycling factor [Enterococcus faecium E1590]
gi|431073185|ref|ZP_19494729.1| ribosome-recycling factor [Enterococcus faecium E1604]
gi|431108221|ref|ZP_19497372.1| ribosome-recycling factor [Enterococcus faecium E1613]
gi|431146249|ref|ZP_19499146.1| ribosome-recycling factor [Enterococcus faecium E1620]
gi|431229883|ref|ZP_19502086.1| ribosome-recycling factor [Enterococcus faecium E1622]
gi|431252274|ref|ZP_19504332.1| ribosome-recycling factor [Enterococcus faecium E1623]
gi|431292255|ref|ZP_19506803.1| ribosome-recycling factor [Enterococcus faecium E1626]
gi|431370251|ref|ZP_19509950.1| ribosome-recycling factor [Enterococcus faecium E1627]
gi|431412559|ref|ZP_19511994.1| ribosome-recycling factor [Enterococcus faecium E1630]
gi|431497587|ref|ZP_19514741.1| ribosome-recycling factor [Enterococcus faecium E1634]
gi|431542018|ref|ZP_19518247.1| ribosome-recycling factor [Enterococcus faecium E1731]
gi|431586086|ref|ZP_19520601.1| ribosome-recycling factor [Enterococcus faecium E1861]
gi|431651875|ref|ZP_19523804.1| ribosome-recycling factor [Enterococcus faecium E1904]
gi|431737464|ref|ZP_19526418.1| ribosome-recycling factor [Enterococcus faecium E1972]
gi|431739906|ref|ZP_19528825.1| ribosome-recycling factor [Enterococcus faecium E2039]
gi|431743023|ref|ZP_19531904.1| ribosome-recycling factor [Enterococcus faecium E2071]
gi|431746289|ref|ZP_19535123.1| ribosome-recycling factor [Enterococcus faecium E2134]
gi|431750009|ref|ZP_19538736.1| ribosome-recycling factor [Enterococcus faecium E2297]
gi|431752112|ref|ZP_19540797.1| ribosome-recycling factor [Enterococcus faecium E2620]
gi|431754933|ref|ZP_19543593.1| ribosome-recycling factor [Enterococcus faecium E2883]
gi|431756936|ref|ZP_19545568.1| ribosome-recycling factor [Enterococcus faecium E3083]
gi|431759447|ref|ZP_19548061.1| ribosome-recycling factor [Enterococcus faecium E3346]
gi|431762163|ref|ZP_19550725.1| ribosome-recycling factor [Enterococcus faecium E3548]
gi|431764220|ref|ZP_19552763.1| ribosome-recycling factor [Enterococcus faecium E4215]
gi|431767310|ref|ZP_19555764.1| ribosome-recycling factor [Enterococcus faecium E1321]
gi|431770928|ref|ZP_19559322.1| ribosome-recycling factor [Enterococcus faecium E1644]
gi|431772381|ref|ZP_19560722.1| ribosome-recycling factor [Enterococcus faecium E2369]
gi|431775673|ref|ZP_19563945.1| ribosome-recycling factor [Enterococcus faecium E2560]
gi|431778894|ref|ZP_19567099.1| ribosome-recycling factor [Enterococcus faecium E4389]
gi|431781784|ref|ZP_19569927.1| ribosome-recycling factor [Enterococcus faecium E6012]
gi|431785832|ref|ZP_19573854.1| ribosome-recycling factor [Enterococcus faecium E6045]
gi|447912463|ref|YP_007393875.1| Ribosome recycling factor [Enterococcus faecium NRRL B-2354]
gi|227179068|gb|EEI60040.1| ribosome recycling factor [Enterococcus faecium TX1330]
gi|257812761|gb|EEV41519.1| ribosome recycling factor [Enterococcus faecium 1,230,933]
gi|257818826|gb|EEV46154.1| ribosome recycling factor [Enterococcus faecium 1,231,502]
gi|257820173|gb|EEV47321.1| ribosome recycling factor [Enterococcus faecium 1,231,501]
gi|257823130|gb|EEV50062.1| ribosome recycling factor [Enterococcus faecium 1,141,733]
gi|257825630|gb|EEV52256.1| ribosome recycling factor [Enterococcus faecium 1,231,410]
gi|257832206|gb|EEV58627.1| ribosome recycling factor [Enterococcus faecium Com12]
gi|257836143|gb|EEV61217.1| ribosome recycling factor [Enterococcus faecium Com15]
gi|260073953|gb|EEW62277.1| ribosome recycling factor [Enterococcus faecium C68]
gi|260077581|gb|EEW65298.1| ribosome recycling factor [Enterococcus faecium TC 6]
gi|289161974|gb|EFD09841.1| ribosome recycling factor [Enterococcus faecium D344SRF]
gi|291589807|gb|EFF21608.1| ribosome recycling factor [Enterococcus faecium E1071]
gi|291593219|gb|EFF24793.1| ribosome recycling factor [Enterococcus faecium E1636]
gi|291593441|gb|EFF24999.1| ribosome recycling factor [Enterococcus faecium E1679]
gi|291599736|gb|EFF30746.1| ribosome recycling factor [Enterococcus faecium U0317]
gi|291601177|gb|EFF31464.1| ribosome recycling factor [Enterococcus faecium E1039]
gi|291605880|gb|EFF35311.1| ribosome recycling factor [Enterococcus faecium E1162]
gi|291609291|gb|EFF38562.1| ribosome recycling factor [Enterococcus faecium E980]
gi|292643748|gb|EFF61869.1| ribosome recycling factor [Enterococcus faecium PC4.1]
gi|313590319|gb|EFR69164.1| ribosome recycling factor [Enterococcus faecium TX0133a01]
gi|313592872|gb|EFR71717.1| ribosome recycling factor [Enterococcus faecium TX0133B]
gi|313596330|gb|EFR75175.1| ribosome recycling factor [Enterococcus faecium TX0133A]
gi|313599080|gb|EFR77925.1| ribosome recycling factor [Enterococcus faecium TX0133C]
gi|313643139|gb|EFS07719.1| ribosome recycling factor [Enterococcus faecium TX0133a04]
gi|313646053|gb|EFS10633.1| ribosome recycling factor [Enterococcus faecium TX0082]
gi|364089297|gb|EHM31997.1| ribosome recycling factor [Enterococcus faecium E4453]
gi|364090242|gb|EHM32853.1| ribosome recycling factor [Enterococcus faecium E4452]
gi|378938737|gb|AFC63809.1| ribosome recycling factor [Enterococcus faecium Aus0004]
gi|388534115|gb|AFK59307.1| ribosome recycling factor [Enterococcus faecium DO]
gi|402410451|gb|EJV42854.1| ribosome recycling factor [Enterococcus faecium TX1337RF]
gi|402920729|gb|EJX41219.1| ribosome recycling factor [Enterococcus faecium S447]
gi|402922027|gb|EJX42434.1| ribosome recycling factor [Enterococcus faecium R501]
gi|402922334|gb|EJX42728.1| ribosome recycling factor [Enterococcus faecium V689]
gi|402926823|gb|EJX46830.1| ribosome recycling factor [Enterococcus faecium R499]
gi|402934844|gb|EJX54142.1| ribosome recycling factor [Enterococcus faecium R494]
gi|402935433|gb|EJX54682.1| ribosome recycling factor [Enterococcus faecium R496]
gi|402939470|gb|EJX58377.1| ribosome recycling factor [Enterococcus faecium R497]
gi|402941535|gb|EJX60250.1| ribosome recycling factor [Enterococcus faecium R446]
gi|402942441|gb|EJX61028.1| ribosome recycling factor [Enterococcus faecium P1986]
gi|402947207|gb|EJX65430.1| ribosome recycling factor [Enterococcus faecium P1190]
gi|402953142|gb|EJX70880.1| ribosome recycling factor [Enterococcus faecium P1140]
gi|402958490|gb|EJX75801.1| ribosome recycling factor [Enterococcus faecium P1137]
gi|402962864|gb|EJX79771.1| ribosome recycling factor [Enterococcus faecium P1139]
gi|402964486|gb|EJX81261.1| ribosome recycling factor [Enterococcus faecium ERV99]
gi|402968343|gb|EJX84829.1| ribosome recycling factor [Enterococcus faecium P1123]
gi|402970655|gb|EJX86973.1| ribosome recycling factor [Enterococcus faecium ERV69]
gi|402971629|gb|EJX87893.1| ribosome recycling factor [Enterococcus faecium ERV38]
gi|402972369|gb|EJX88575.1| ribosome recycling factor [Enterococcus faecium ERV26]
gi|402982538|gb|EJX97999.1| ribosome recycling factor [Enterococcus faecium ERV168]
gi|402984561|gb|EJX99863.1| ribosome recycling factor [Enterococcus faecium ERV161]
gi|402985436|gb|EJY00645.1| ribosome recycling factor [Enterococcus faecium ERV165]
gi|402991051|gb|EJY05881.1| ribosome recycling factor [Enterococcus faecium ERV102]
gi|402994624|gb|EJY09144.1| ribosome recycling factor [Enterococcus faecium ERV1]
gi|402995288|gb|EJY09759.1| ribosome recycling factor [Enterococcus faecium E422]
gi|402997220|gb|EJY11565.1| ribosome recycling factor [Enterococcus faecium E417]
gi|403002490|gb|EJY16461.1| ribosome recycling factor [Enterococcus faecium C621]
gi|403006232|gb|EJY19894.1| ribosome recycling factor [Enterococcus faecium C1904]
gi|403010482|gb|EJY23858.1| ribosome recycling factor [Enterococcus faecium C497]
gi|403014397|gb|EJY27406.1| ribosome recycling factor [Enterococcus faecium 515]
gi|403016660|gb|EJY29468.1| ribosome recycling factor [Enterococcus faecium 513]
gi|403019977|gb|EJY32544.1| ribosome recycling factor [Enterococcus faecium 514]
gi|403027896|gb|EJY39748.1| ribosome recycling factor [Enterococcus faecium 511]
gi|403027992|gb|EJY39839.1| ribosome recycling factor [Enterococcus faecium 510]
gi|403031400|gb|EJY43009.1| ribosome recycling factor [Enterococcus faecium 509]
gi|403034799|gb|EJY46226.1| ribosome recycling factor [Enterococcus faecium 504]
gi|403035599|gb|EJY46985.1| ribosome recycling factor [Enterococcus faecium 505]
gi|403035872|gb|EJY47252.1| ribosome recycling factor [Enterococcus faecium 506]
gi|403043478|gb|EJY54387.1| ribosome recycling factor [Enterococcus faecium 503]
gi|404453536|gb|EKA00589.1| ribosome recycling factor [Enterococcus sp. GMD4E]
gi|404456756|gb|EKA03387.1| ribosome recycling factor [Enterococcus sp. GMD3E]
gi|404462686|gb|EKA08399.1| ribosome recycling factor [Enterococcus sp. GMD2E]
gi|404469160|gb|EKA13986.1| ribosome recycling factor [Enterococcus sp. GMD1E]
gi|410734415|gb|EKQ76335.1| ribosome recycling factor [Enterococcus sp. GMD5E]
gi|425722955|gb|EKU85846.1| ribosome-recycling factor [Enterococcus durans FB129-CNAB-4]
gi|430440060|gb|ELA50337.1| ribosome-recycling factor [Enterococcus faecium E0045]
gi|430443209|gb|ELA53206.1| ribosome-recycling factor [Enterococcus faecium E0120]
gi|430446062|gb|ELA55761.1| ribosome-recycling factor [Enterococcus faecium E0164]
gi|430482405|gb|ELA59523.1| ribosome-recycling factor [Enterococcus faecium E0333]
gi|430484332|gb|ELA61353.1| ribosome-recycling factor [Enterococcus faecium E0269]
gi|430486436|gb|ELA63272.1| ribosome-recycling factor [Enterococcus faecium E0679]
gi|430491963|gb|ELA68404.1| ribosome-recycling factor [Enterococcus faecium E0688]
gi|430494278|gb|ELA70528.1| ribosome-recycling factor [Enterococcus faecium E1007]
gi|430496522|gb|ELA72581.1| ribosome-recycling factor [Enterococcus faecium E1050]
gi|430537328|gb|ELA77671.1| ribosome-recycling factor [Enterococcus faecium E1185]
gi|430539751|gb|ELA79990.1| ribosome-recycling factor [Enterococcus faecium E1133]
gi|430542356|gb|ELA82464.1| ribosome-recycling factor [Enterococcus faecium E1258]
gi|430545979|gb|ELA85945.1| ribosome-recycling factor [Enterococcus faecium E1552]
gi|430547462|gb|ELA87385.1| ribosome-recycling factor [Enterococcus faecium E1392]
gi|430552746|gb|ELA92474.1| ribosome-recycling factor [Enterococcus faecium E1573]
gi|430553270|gb|ELA92971.1| ribosome-recycling factor [Enterococcus faecium E1574]
gi|430557882|gb|ELA97318.1| ribosome-recycling factor [Enterococcus faecium E1576]
gi|430561393|gb|ELB00661.1| ribosome-recycling factor [Enterococcus faecium E1578]
gi|430564234|gb|ELB03418.1| ribosome-recycling factor [Enterococcus faecium E1590]
gi|430566757|gb|ELB05853.1| ribosome-recycling factor [Enterococcus faecium E1604]
gi|430569345|gb|ELB08349.1| ribosome-recycling factor [Enterococcus faecium E1613]
gi|430573869|gb|ELB12647.1| ribosome-recycling factor [Enterococcus faecium E1622]
gi|430575789|gb|ELB14486.1| ribosome-recycling factor [Enterococcus faecium E1620]
gi|430578700|gb|ELB17252.1| ribosome-recycling factor [Enterococcus faecium E1623]
gi|430582167|gb|ELB20595.1| ribosome-recycling factor [Enterococcus faecium E1626]
gi|430583998|gb|ELB22356.1| ribosome-recycling factor [Enterococcus faecium E1627]
gi|430588522|gb|ELB26714.1| ribosome-recycling factor [Enterococcus faecium E1634]
gi|430589514|gb|ELB27642.1| ribosome-recycling factor [Enterococcus faecium E1630]
gi|430593065|gb|ELB31052.1| ribosome-recycling factor [Enterococcus faecium E1731]
gi|430593264|gb|ELB31250.1| ribosome-recycling factor [Enterococcus faecium E1861]
gi|430599121|gb|ELB36837.1| ribosome-recycling factor [Enterococcus faecium E1972]
gi|430600928|gb|ELB38554.1| ribosome-recycling factor [Enterococcus faecium E1904]
gi|430604033|gb|ELB41533.1| ribosome-recycling factor [Enterococcus faecium E2039]
gi|430607387|gb|ELB44707.1| ribosome-recycling factor [Enterococcus faecium E2071]
gi|430609058|gb|ELB46264.1| ribosome-recycling factor [Enterococcus faecium E2134]
gi|430610482|gb|ELB47626.1| ribosome-recycling factor [Enterococcus faecium E2297]
gi|430614176|gb|ELB51165.1| ribosome-recycling factor [Enterococcus faecium E2620]
gi|430618761|gb|ELB55602.1| ribosome-recycling factor [Enterococcus faecium E2883]
gi|430620790|gb|ELB57592.1| ribosome-recycling factor [Enterococcus faecium E3083]
gi|430624855|gb|ELB61505.1| ribosome-recycling factor [Enterococcus faecium E3548]
gi|430626247|gb|ELB62833.1| ribosome-recycling factor [Enterococcus faecium E3346]
gi|430631114|gb|ELB67444.1| ribosome-recycling factor [Enterococcus faecium E1321]
gi|430631405|gb|ELB67727.1| ribosome-recycling factor [Enterococcus faecium E4215]
gi|430634378|gb|ELB70504.1| ribosome-recycling factor [Enterococcus faecium E1644]
gi|430638069|gb|ELB74050.1| ribosome-recycling factor [Enterococcus faecium E2369]
gi|430642942|gb|ELB78708.1| ribosome-recycling factor [Enterococcus faecium E2560]
gi|430643375|gb|ELB79119.1| ribosome-recycling factor [Enterococcus faecium E4389]
gi|430646703|gb|ELB82169.1| ribosome-recycling factor [Enterococcus faecium E6045]
gi|430648789|gb|ELB84186.1| ribosome-recycling factor [Enterococcus faecium E6012]
gi|445188172|gb|AGE29814.1| Ribosome recycling factor [Enterococcus faecium NRRL B-2354]
Length = 185
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 87/126 (69%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+I + K +M++ ++ +R GR+N ++LD+I V YYG+P L +A I P++
Sbjct: 3 DAIMTEAKEKMKKAAQNLQRELGQIRAGRANASLLDRITVNYYGAPTPLNQMASIQIPEA 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
L+I P+DKS L+ +EKAI++SD+G++P NDG VIRL +PQLT ERRKEL+K V K+AE
Sbjct: 63 RVLMITPFDKSILQDVEKAIMASDIGISPTNDGNVIRLVIPQLTEERRKELAKDVKKEAE 122
Query: 214 EGKVVM 219
K+ +
Sbjct: 123 NAKIAI 128
>gi|379057983|ref|ZP_09848509.1| ribosome recycling factor [Serinicoccus profundi MCCC 1A05965]
Length = 188
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 82/117 (70%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+ME+ +++ R + S+RTGR++P M K+EV+YYG+P L+ +A D+ ++LI PYD
Sbjct: 15 KMEKALEVAREDMASIRTGRAHPGMFSKLEVDYYGAPTPLQQLASFGIQDARTVLITPYD 74
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
KS++K IEKA+ +DLG P+NDG IR+ +PQLT ERR+E K+ + E+ KV +
Sbjct: 75 KSAMKDIEKALREADLGANPSNDGNAIRIVMPQLTEERRREYIKLAHSKGEDAKVTV 131
>gi|310779561|ref|YP_003967894.1| ribosome recycling factor [Ilyobacter polytropus DSM 2926]
gi|309748884|gb|ADO83546.1| ribosome recycling factor [Ilyobacter polytropus DSM 2926]
Length = 186
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 58/124 (46%), Positives = 89/124 (71%)
Query: 96 IEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSS 155
I D + +M++ I+ + F S+R GR+N +MLD I+VE YGS + L +A ++ P++
Sbjct: 6 IMNDCREKMDKAIESTKHKFASIRAGRANVSMLDGIKVEQYGSEMPLNQVANVSAPEARL 65
Query: 156 LLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEG 215
L+I P+DKS ++ IEK I+ S+LG+TPNNDG+VIRL +P+LT+ERRKE K+ +AE G
Sbjct: 66 LVIDPWDKSIIQKIEKTIMLSNLGLTPNNDGKVIRLQIPELTAERRKEYVKLAKTEAENG 125
Query: 216 KVVM 219
K+ +
Sbjct: 126 KIAI 129
>gi|256003336|ref|ZP_05428327.1| ribosome recycling factor [Clostridium thermocellum DSM 2360]
gi|281417721|ref|ZP_06248741.1| ribosome recycling factor [Clostridium thermocellum JW20]
gi|385778562|ref|YP_005687727.1| ribosome recycling factor [Clostridium thermocellum DSM 1313]
gi|419723610|ref|ZP_14250725.1| Ribosome-recycling factor [Clostridium thermocellum AD2]
gi|419724565|ref|ZP_14251627.1| Ribosome-recycling factor [Clostridium thermocellum YS]
gi|255992626|gb|EEU02717.1| ribosome recycling factor [Clostridium thermocellum DSM 2360]
gi|281409123|gb|EFB39381.1| ribosome recycling factor [Clostridium thermocellum JW20]
gi|316940242|gb|ADU74276.1| ribosome recycling factor [Clostridium thermocellum DSM 1313]
gi|380772112|gb|EIC05970.1| Ribosome-recycling factor [Clostridium thermocellum YS]
gi|380780292|gb|EIC09975.1| Ribosome-recycling factor [Clostridium thermocellum AD2]
Length = 183
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 85/122 (69%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K+++ +M++T+ +++ N+VR GR+N A+LD+I V+YYG P + + I+ P+ ++
Sbjct: 5 KNIEEKMKKTVSVLKDELNTVRAGRANAAILDRITVDYYGVPTPINQLGTISVPEPRVIV 64
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
IQP+D LK IEK I SD+G+ PNNDG+VIRL P LT ERRKEL+K+ K E+ KV
Sbjct: 65 IQPWDAQILKEIEKEIQKSDIGINPNNDGKVIRLVFPPLTEERRKELTKLAKKYGEDAKV 124
Query: 218 VM 219
+
Sbjct: 125 AI 126
>gi|89098609|ref|ZP_01171491.1| ribosome recycling factor [Bacillus sp. NRRL B-14911]
gi|89086571|gb|EAR65690.1| ribosome recycling factor [Bacillus sp. NRRL B-14911]
Length = 185
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 59/119 (49%), Positives = 83/119 (69%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K RM + I S+R GR++ ++LD+I V+YYG+P + +A I+ P++ L+IQP
Sbjct: 10 KERMTKAIQAYSRELASIRAGRASASLLDRITVDYYGAPTPVNQLAGISVPEARLLVIQP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
YDKS L IEKAI+ SDLG+ P NDG ++RL +P LT ERRKEL KVV K++E+ KV +
Sbjct: 70 YDKSILGEIEKAIIKSDLGLNPTNDGNLLRLAIPALTEERRKELVKVVKKESEDAKVAI 128
>gi|125973518|ref|YP_001037428.1| ribosome recycling factor [Clostridium thermocellum ATCC 27405]
gi|190360240|sp|A3DE56.1|RRF_CLOTH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|125713743|gb|ABN52235.1| ribosome recycling factor [Clostridium thermocellum ATCC 27405]
Length = 183
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 85/122 (69%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K+++ +M++T+ +++ N+VR GR+N A+LD+I V+YYG P + + I+ P+ ++
Sbjct: 5 KNIEEKMKKTVSVLKDELNTVRAGRANAAILDRITVDYYGVPTPINQLGTISVPEPRVIV 64
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
IQP+D LK IEK I SD+G+ PNNDG+VIRL P LT ERRKEL+K+ K E+ KV
Sbjct: 65 IQPWDAQILKEIEKEIQKSDIGINPNNDGKVIRLVFPPLTEERRKELTKLAKKYGEDAKV 124
Query: 218 VM 219
+
Sbjct: 125 AI 126
>gi|357633491|ref|ZP_09131369.1| ribosome recycling factor [Desulfovibrio sp. FW1012B]
gi|357582045|gb|EHJ47378.1| ribosome recycling factor [Desulfovibrio sp. FW1012B]
Length = 184
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 55/117 (47%), Positives = 86/117 (73%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
RM++ + ++ F +RTGR+ ++LD + VEYYGS L+ IA ++TPDS ++ IQP+D
Sbjct: 11 RMKKALSVLDKEFARLRTGRATTSLLDGVRVEYYGSVTPLEQIASVSTPDSRTITIQPWD 70
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
+ + +E+AI+ SDLG+TP NDG++IR+++P LT +RRK+L+KV K AEE KV +
Sbjct: 71 RKAFNDVERAILKSDLGLTPVNDGKIIRISIPPLTEDRRKDLAKVAKKYAEEAKVAI 127
>gi|378548701|ref|ZP_09823917.1| hypothetical protein CCH26_01392 [Citricoccus sp. CH26A]
Length = 185
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 59/117 (50%), Positives = 85/117 (72%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+ME+TI+ +F SVRTGR+NP + K+ VEYYGS L+ +A T D+ +LLI P+D
Sbjct: 12 QMEKTIEATGEDFASVRTGRANPGLYSKVMVEYYGSFTPLQQLASFTTTDARTLLISPFD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
S+L++IEKA+ S++G P+NDG+VIR+ +P+LT ERRKE K+V +AEE KV +
Sbjct: 72 VSALRNIEKALSDSEIGANPSNDGKVIRVVMPELTEERRKEYVKLVKSKAEEHKVSL 128
>gi|255659930|ref|ZP_05405339.1| ribosome recycling factor [Mitsuokella multacida DSM 20544]
gi|260847801|gb|EEX67808.1| ribosome recycling factor [Mitsuokella multacida DSM 20544]
Length = 185
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 85/117 (72%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
RM+++I+ ++ F S+R GR+ P++LDK+ V YYG+P + IA++ P+ ++IQP++
Sbjct: 12 RMKKSIEALKHEFASLRAGRATPSLLDKVMVNYYGAPTPVNQIAKVTVPEPRMIMIQPWE 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
KS L IE AI+ SDLG++PN+DG IRL++P LT ERR+EL K V K+ EE KV +
Sbjct: 72 KSILHDIEVAIMKSDLGLSPNSDGTAIRLSIPALTQERRQELVKTVNKKTEEAKVAL 128
>gi|397576027|gb|EJK50025.1| hypothetical protein THAOC_31043 [Thalassiosira oceanica]
Length = 347
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 62/135 (45%), Positives = 88/135 (65%), Gaps = 4/135 (2%)
Query: 85 TIEEIEAEKSSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKS 144
++EE+E + D + RM++T+ + N ++RTGR+N MLD++E +YYG+ +
Sbjct: 160 SVEEMEM----VTLDCEERMDKTMSNLADNLLTIRTGRANANMLDRVEADYYGAMTPINQ 215
Query: 145 IAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKEL 204
+A I+ P S L I P+DKSSL IEKAI+ S LG TPNNDG V+R+ +PQLT +RRKEL
Sbjct: 216 MATISVPSSQQLQISPFDKSSLVDIEKAIIYSGLGFTPNNDGNVLRINIPQLTEDRRKEL 275
Query: 205 SKVVAKQAEEGKVVM 219
K EE KV +
Sbjct: 276 LKQCKSIGEEAKVAI 290
>gi|392940941|ref|ZP_10306585.1| ribosome recycling factor [Thermoanaerobacter siderophilus SR4]
gi|392292691|gb|EIW01135.1| ribosome recycling factor [Thermoanaerobacter siderophilus SR4]
Length = 184
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 85/117 (72%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M++++ +++ ++R GR+NPA+LD+I V+YYG+P L +A I P+ L++QP+D
Sbjct: 11 KMQKSLSVLKNELAAIRAGRANPALLDRIMVDYYGTPTPLNRLATITAPEPRVLVVQPWD 70
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
S + IEKAI SDLG+ P +DG+V+RL P+LT ERRKEL K+V K+AEE KV +
Sbjct: 71 VSKVSDIEKAIQKSDLGINPVSDGKVLRLVFPELTEERRKELVKLVHKKAEEAKVAV 127
>gi|406909373|gb|EKD49638.1| hypothetical protein ACD_63C00084G0001 [uncultured bacterium]
Length = 182
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 56/124 (45%), Positives = 91/124 (73%)
Query: 96 IEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSS 155
EKD+K ++E+ +D R +RTGR++P++++ I V+YYGSP LK +A I+TP++
Sbjct: 5 FEKDIKDKLEKVLDHFRGELAKLRTGRAHPSLVEDIVVDYYGSPTLLKQMASISTPEARV 64
Query: 156 LLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEG 215
LLIQP+DK+S+K +E+AI++S LG+ P+N+G+ IR+ LP L E R +L+K++ + EE
Sbjct: 65 LLIQPWDKNSVKDVERAILASKLGLNPSNEGDKIRIMLPPLVEETRSDLTKLLGLKREEA 124
Query: 216 KVVM 219
KV +
Sbjct: 125 KVAI 128
>gi|220912157|ref|YP_002487466.1| ribosome recycling factor [Arthrobacter chlorophenolicus A6]
gi|254809488|sp|B8HFN8.1|RRF_ARTCA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|219859035|gb|ACL39377.1| ribosome recycling factor [Arthrobacter chlorophenolicus A6]
Length = 185
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 86/115 (74%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M++ +++ + +F S+RTGR+NP + +++ V+YYGSP L+ +A PD+ ++LI P+D
Sbjct: 12 KMDKAVEVAKEDFASIRTGRANPGLYNRVLVDYYGSPTPLQQLASFAIPDARTILITPFD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
K++L+ IE+A+ S++G P+NDG VIR+T+P+LT ERRKE K+V + E+ KV
Sbjct: 72 KTALRDIERALSDSEVGANPSNDGNVIRITIPELTKERRKEYVKIVKTKGEDAKV 126
>gi|427392490|ref|ZP_18886495.1| ribosome recycling factor [Alloiococcus otitis ATCC 51267]
gi|425731451|gb|EKU94269.1| ribosome recycling factor [Alloiococcus otitis ATCC 51267]
Length = 185
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 57/120 (47%), Positives = 86/120 (71%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
+D++ RM + ID + +R GR+N +++++++V YYG+P L +AQI+ P++ LL
Sbjct: 7 QDLENRMTKAIDSLNYQLGGIRAGRANASLVERVQVNYYGAPTPLNQLAQISVPEARVLL 66
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
I PYDKS+LK IE AI SD+G+ P +DGEVIRL +P LT ERRKE++K V ++ E+ KV
Sbjct: 67 ISPYDKSTLKDIETAIQKSDIGIPPASDGEVIRLVVPALTEERRKEIAKKVGEEEEKAKV 126
>gi|330718876|ref|ZP_08313476.1| ribosome recycling factor [Leuconostoc fallax KCTC 3537]
Length = 181
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 58/121 (47%), Positives = 83/121 (68%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D KARM++ D ++ +R GR+NPA+L+++EVEYYG+ L +A I P++ LL+
Sbjct: 7 DAKARMQKAQDALQRELAGIRAGRANPALLNRVEVEYYGAMTPLNQVASIQVPEARILLV 66
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
P+DK++L +I AI SDLG+ P +DG IRL +PQLT ERRKELSK V + E+ KV
Sbjct: 67 TPFDKTALDAIVHAINVSDLGLNPASDGNAIRLVIPQLTEERRKELSKDVKAEGEKAKVA 126
Query: 219 M 219
+
Sbjct: 127 I 127
>gi|404214638|ref|YP_006668833.1| Ribosome recycling factor [Gordonia sp. KTR9]
gi|403645437|gb|AFR48677.1| Ribosome recycling factor [Gordonia sp. KTR9]
Length = 185
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 86/121 (71%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + +ME+ +++ + + S+RTGR+NP+M +KI +EYYGS + +A INTP+ ++I
Sbjct: 8 DAEEKMEKAVNVAKEDMGSIRTGRANPSMFNKINIEYYGSITPVTQVASINTPEPRLVVI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
+PY+ S+L+ IE AI +SDLG+ P NDG +IR+ +PQLT ERR+EL K + E+ KV
Sbjct: 68 KPYEASTLRDIETAIRNSDLGVNPTNDGTIIRVAVPQLTEERRRELVKQAKGKGEDAKVA 127
Query: 219 M 219
+
Sbjct: 128 I 128
>gi|323339424|ref|ZP_08079706.1| ribosome recycling factor [Lactobacillus ruminis ATCC 25644]
gi|323093135|gb|EFZ35725.1| ribosome recycling factor [Lactobacillus ruminis ATCC 25644]
Length = 240
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 84/117 (71%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M++ ++ +R G +N ++L+++ VEYYG+P L +AQI+ P++ LL+ PYD
Sbjct: 67 KMQKAEAALQHELGGIRAGVANASLLNRVMVEYYGAPTPLNQMAQISVPEARVLLVTPYD 126
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
KSSLK +E A+++SDLG+TP NDG IRL +PQLT ERRKEL+K V AE+GKV +
Sbjct: 127 KSSLKDVEHALLASDLGLTPMNDGSAIRLVIPQLTEERRKELAKQVRAAAEKGKVAV 183
>gi|453364566|dbj|GAC79843.1| ribosome-recycling factor [Gordonia malaquae NBRC 108250]
Length = 185
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 56/121 (46%), Positives = 84/121 (69%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + +ME+ + VR + S+RTGR+NPAM +K+ +EYYG+ + +A INTP+ ++I
Sbjct: 8 DAEEKMEKAVAHVRDDMASIRTGRANPAMFNKVAIEYYGARTPITQVASINTPEPRLVVI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
+PY+ S++ IE AI +SDLG+ P NDG VIR+ +PQLT ERRK+L K + E+ KV
Sbjct: 68 KPYEASTMNDIETAIRNSDLGVNPTNDGNVIRVAIPQLTEERRKDLVKQARNKGEDAKVA 127
Query: 219 M 219
+
Sbjct: 128 I 128
>gi|284032627|ref|YP_003382558.1| ribosome recycling factor [Kribbella flavida DSM 17836]
gi|283811920|gb|ADB33759.1| ribosome recycling factor [Kribbella flavida DSM 17836]
Length = 185
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 84/122 (68%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
++ + +M + +++ + +F ++RTGR++P+M + +YYGSP L+ +A P+ ++L
Sbjct: 7 REAEQKMAKAVEVAKNDFAAIRTGRAHPSMFASLLADYYGSPTPLQQLAGFQVPEPRTVL 66
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
I PYDK ++ +IEKAI SDLG+ P NDG VIR+ +PQLT ERRKE KV +AEE KV
Sbjct: 67 ISPYDKGAMAAIEKAIRDSDLGVNPGNDGSVIRVVMPQLTEERRKEYIKVARTKAEEAKV 126
Query: 218 VM 219
M
Sbjct: 127 SM 128
>gi|325661706|ref|ZP_08150329.1| ribosome-recycling factor [Lachnospiraceae bacterium 4_1_37FAA]
gi|325471959|gb|EGC75174.1| ribosome-recycling factor [Lachnospiraceae bacterium 4_1_37FAA]
Length = 183
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 55/117 (47%), Positives = 86/117 (73%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+ME++ + + + ++R GR+NP +LDK+ V+YYGSP ++ +A ++ P++ + IQP++
Sbjct: 11 KMEKSYNSLTSELATIRAGRANPHVLDKLTVDYYGSPTPIQQVANVSVPEARMIQIQPWE 70
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
KS ++ IEKAI++SD+G+ P NDG VIRL P+LT ERRKEL K V K+ E GKV +
Sbjct: 71 KSMVREIEKAILTSDIGINPTNDGTVIRLVFPELTEERRKELVKDVKKKGEAGKVAV 127
>gi|152976190|ref|YP_001375707.1| ribosome recycling factor [Bacillus cytotoxicus NVH 391-98]
gi|189044044|sp|A7GRF4.1|RRF_BACCN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|152024942|gb|ABS22712.1| ribosome recycling factor [Bacillus cytotoxicus NVH 391-98]
Length = 185
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 61/127 (48%), Positives = 87/127 (68%), Gaps = 5/127 (3%)
Query: 93 KSSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPD 152
KSS EK ME+ + +VR GR++ ++LDK++V+YYG+P + +A I P+
Sbjct: 7 KSSTEK-----MEKAVAAYSRELATVRAGRASASILDKVQVDYYGAPTPVVQLANITVPE 61
Query: 153 SSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQA 212
+ L+IQPYDK+S+ IEKAI+ +DLG+ P+NDG VIR+ P LT ERR+EL KVV K A
Sbjct: 62 ARLLVIQPYDKTSIGDIEKAILKADLGLNPSNDGSVIRIAFPALTEERRRELVKVVKKYA 121
Query: 213 EEGKVVM 219
E+ KV +
Sbjct: 122 EDAKVAI 128
>gi|218295073|ref|ZP_03495909.1| ribosome recycling factor [Thermus aquaticus Y51MC23]
gi|218244276|gb|EED10801.1| ribosome recycling factor [Thermus aquaticus Y51MC23]
Length = 185
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 89/121 (73%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+ ++ M+++++ + N + +RTGR+NPA+L ++VEYYG+PV L IA ++ PD+ +L++
Sbjct: 9 ETRSHMQKSLEALEHNLSGLRTGRANPALLLHLKVEYYGTPVPLSQIATVSAPDARTLVV 68
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
Q +D+++LK+IEKAI SDLG+ P+N G+ + + +P LT ERRKEL K AEEG++
Sbjct: 69 QSWDQNALKAIEKAIRDSDLGLNPSNKGDALYINIPPLTEERRKELVKAARHYAEEGRIA 128
Query: 219 M 219
+
Sbjct: 129 I 129
>gi|302335682|ref|YP_003800889.1| ribosome recycling factor [Olsenella uli DSM 7084]
gi|301319522|gb|ADK68009.1| ribosome recycling factor [Olsenella uli DSM 7084]
Length = 181
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 61/116 (52%), Positives = 83/116 (71%)
Query: 104 MERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDK 163
M++ ++ +R NF VRTGR+N +LD I V+YYG + +A + P++S L+++P+DK
Sbjct: 12 MDKCLNALRGNFARVRTGRANAHVLDDIRVDYYGQMTPITQLAGVKVPEASMLVVEPWDK 71
Query: 164 SSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
S+LKSIEKAI SSDLG+TP+NDG IRL P+ T ERRKEL K K AEE KV +
Sbjct: 72 SALKSIEKAIESSDLGITPSNDGVSIRLPFPKPTEERRKELVKECHKYAEEAKVAI 127
>gi|345019859|ref|ZP_08783472.1| ribosome recycling factor [Ornithinibacillus scapharcae TW25]
Length = 185
Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 60/124 (48%), Positives = 85/124 (68%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
I + + +M++TI N +VR GR+NP++LD + VEYYG+ L +A I P++
Sbjct: 3 DQIMNECRDKMQQTIQAFTRNLATVRAGRANPSLLDSVFVEYYGANTPLNQLASIGAPEA 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
L+I PYDK+++ IEKAI +DLG++P+NDG VIRL +P LT ERRK+L KVV K AE
Sbjct: 63 RLLVITPYDKTAMGDIEKAIQKADLGLSPSNDGNVIRLNIPPLTEERRKDLVKVVGKYAE 122
Query: 214 EGKV 217
E +V
Sbjct: 123 EFRV 126
>gi|303325662|ref|ZP_07356105.1| ribosome recycling factor [Desulfovibrio sp. 3_1_syn3]
gi|345892231|ref|ZP_08843054.1| ribosome-recycling factor [Desulfovibrio sp. 6_1_46AFAA]
gi|302863578|gb|EFL86509.1| ribosome recycling factor [Desulfovibrio sp. 3_1_syn3]
gi|345047370|gb|EGW51235.1| ribosome-recycling factor [Desulfovibrio sp. 6_1_46AFAA]
Length = 186
Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 56/121 (46%), Positives = 86/121 (71%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + RME+ + + +F +RTGR++ A++D I+ +YYG+P + +A + PDS +L I
Sbjct: 9 DAEDRMEKALAALDRDFAKLRTGRASTALVDGIKADYYGTPTPVSQMASVAVPDSRTLTI 68
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QP+DK + ++EKAI+ SDLG+TP NDG++IR+ +P LT ERRK+L KV K +EE KV
Sbjct: 69 QPWDKGGIAAVEKAILKSDLGLTPVNDGKIIRIVIPPLTEERRKDLVKVARKYSEEAKVA 128
Query: 219 M 219
+
Sbjct: 129 V 129
>gi|430835687|ref|ZP_19453675.1| ribosome-recycling factor [Enterococcus faecium E0680]
gi|430871449|ref|ZP_19483772.1| ribosome-recycling factor [Enterococcus faecium E1575]
gi|430489224|gb|ELA65853.1| ribosome-recycling factor [Enterococcus faecium E0680]
gi|430557769|gb|ELA97206.1| ribosome-recycling factor [Enterococcus faecium E1575]
Length = 185
Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 87/126 (69%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+I + K +M++ ++ +R GR+N ++LD+I V YYG+P L +A I P++
Sbjct: 3 DAIMTEAKEKMKKAAQNLQRELGQIRAGRANASLLDRITVNYYGAPTPLNQMASIQIPEA 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
L++ P+DKS L+ +EKAI++SD+G++P NDG VIRL +PQLT ERRKEL+K V K+AE
Sbjct: 63 RVLMVTPFDKSILQDVEKAIMASDIGISPTNDGNVIRLVIPQLTEERRKELAKDVKKEAE 122
Query: 214 EGKVVM 219
K+ +
Sbjct: 123 NAKIAI 128
>gi|383807606|ref|ZP_09963166.1| ribosome recycling factor [Candidatus Aquiluna sp. IMCC13023]
gi|383298960|gb|EIC91575.1| ribosome recycling factor [Candidatus Aquiluna sp. IMCC13023]
Length = 186
Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 87/125 (69%), Gaps = 1/125 (0%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
S I + +M++ ++ + +F SVRTGR+NP M K+ V+YYG+P L + I P++
Sbjct: 3 SEILAEATNKMDKALESTKDDFASVRTGRANPGMFQKVMVDYYGTPTPLTQLCGIQNPEA 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVS-SDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQA 212
S++I PYDK++L +IEKA+++ +LG PNNDGE+IR+ LP+LT ERRKE K+ +A
Sbjct: 63 RSIIINPYDKTALPAIEKALMAMPNLGAQPNNDGEIIRINLPELTEERRKEYVKLTRDKA 122
Query: 213 EEGKV 217
E G+V
Sbjct: 123 EHGRV 127
>gi|380301913|ref|ZP_09851606.1| ribosome recycling factor [Brachybacterium squillarum M-6-3]
Length = 188
Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 88/125 (70%)
Query: 95 SIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSS 154
I KD +++M +TID+ + F+++RTGR+N AM I VEYYG+P L +A + P++
Sbjct: 7 GILKDAESKMAKTIDVTKEEFSAIRTGRANAAMFQGITVEYYGAPTPLNQLASLQFPEAR 66
Query: 155 SLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEE 214
++++ PYDK+++ +IE A+ SDLG+ P N+G+ +R+ LP LT ERR+E K+ +AE+
Sbjct: 67 TVIVTPYDKTAMGAIETALRDSDLGVNPANNGDTLRIVLPALTEERRREYVKLAKTKAED 126
Query: 215 GKVVM 219
G+V +
Sbjct: 127 GRVAV 131
>gi|326693032|ref|ZP_08230037.1| ribosome recycling factor [Leuconostoc argentinum KCTC 3773]
gi|339449759|ref|ZP_08653129.1| ribosome recycling factor [Leuconostoc lactis KCTC 3528]
Length = 181
Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 83/119 (69%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D KARM+ D ++ S+RTGR+NP +LD+IEVEYYG+ L +A I+ P++ LLI
Sbjct: 7 DAKARMQGAQDALQRELGSIRTGRANPRILDRIEVEYYGAMTPLNQVASISVPEARILLI 66
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
P+DKS L I +AI SDLG+ P +DG ++RL +PQ+T E RKEL+K V +AE+ KV
Sbjct: 67 TPFDKSVLDEIIRAINMSDLGLNPASDGNIVRLAIPQMTEEGRKELAKQVKAEAEKAKV 125
>gi|253988128|ref|YP_003039484.1| ribosome recycling factor (ribosome-releasing factor) (rrf)
[Photorhabdus asymbiotica]
gi|253779578|emb|CAQ82739.1| ribosome recycling factor (ribosome-releasing factor) (rrf)
[Photorhabdus asymbiotica]
Length = 185
Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 59/124 (47%), Positives = 91/124 (73%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+ I+KD + RME++++ ++ + VRTGR++P++LD I VEYYG+P L+ IA + D+
Sbjct: 3 NEIKKDAQDRMEKSVEALKNQISKVRTGRASPSLLDGITVEYYGAPTPLRQIANVTAEDA 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
+L I +D+S +IEKAI+SSDLG+ P++ G +IR+ LP LT ERRK+L KVV +AE
Sbjct: 63 RTLAITVFDRSMTPAIEKAIMSSDLGLNPSSAGTIIRVPLPPLTEERRKDLIKVVRGEAE 122
Query: 214 EGKV 217
+G+V
Sbjct: 123 QGRV 126
>gi|383828500|ref|ZP_09983589.1| ribosome recycling factor [Saccharomonospora xinjiangensis XJ-54]
gi|383461153|gb|EID53243.1| ribosome recycling factor [Saccharomonospora xinjiangensis XJ-54]
Length = 185
Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 80/119 (67%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + +ME+ + + +VRTGR+ PAM +I VEYYGSP L +A +N P++ ++
Sbjct: 8 DAEDKMEKAVSFAKEELAAVRTGRATPAMFSRIVVEYYGSPTPLNQLASVNIPEARMAVV 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
+PYD + L +IEKAI SDLG+ P NDG +IR+ +PQLT ERRKE+ KV + E+ ++
Sbjct: 68 KPYDATQLAAIEKAIRDSDLGVNPTNDGNIIRVVIPQLTEERRKEMVKVAKSKGEDARI 126
>gi|373955776|ref|ZP_09615736.1| Ribosome-recycling factor [Mucilaginibacter paludis DSM 18603]
gi|373892376|gb|EHQ28273.1| Ribosome-recycling factor [Mucilaginibacter paludis DSM 18603]
Length = 187
Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 86/121 (71%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D KA ME+ I+ + F +R G+++PAMLD + VEYYG+P + +A +N+PD+ +L++
Sbjct: 11 DAKALMEKAIEHTDSEFLKIRAGKASPAMLDGVMVEYYGTPTIITQVASVNSPDARTLVV 70
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QP++K+ L IE+AI+ ++LG P NDG VIR+ +P LT ERR++L K V +AE GK+
Sbjct: 71 QPWEKTLLGPIERAIMEANLGFNPQNDGIVIRINVPPLTEERRRDLVKRVKAEAENGKIA 130
Query: 219 M 219
+
Sbjct: 131 L 131
>gi|334336713|ref|YP_004541865.1| ribosome-recycling factor [Isoptericola variabilis 225]
gi|334107081|gb|AEG43971.1| Ribosome-recycling factor [Isoptericola variabilis 225]
Length = 185
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 81/115 (70%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M+R I++ + F +RTGR+N M KI V+YYG+P L+ +A N PD+ ++LI P+D
Sbjct: 12 KMDRAIEVAKEEFAGIRTGRANSGMFAKITVDYYGAPTPLQQLASFNIPDARTVLISPFD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
KSS+ +IEKA+ SDLG+ P+NDG IR+ +P LT ERR++ K+ +AEE +V
Sbjct: 72 KSSMAAIEKALRDSDLGVNPSNDGNAIRVVMPALTEERRRDYVKMAKTKAEEARV 126
>gi|134102473|ref|YP_001108134.1| ribosome recycling factor [Saccharopolyspora erythraea NRRL 2338]
gi|291004136|ref|ZP_06562109.1| ribosome recycling factor [Saccharopolyspora erythraea NRRL 2338]
gi|166231222|sp|A4FMD4.1|RRF_SACEN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|133915096|emb|CAM05209.1| ribosome recycling factor [Saccharopolyspora erythraea NRRL 2338]
Length = 185
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 86/117 (73%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M++ +++ + +VRTGR+NPAM I V+YYGSP L +A I+ P++ ++I+PYD
Sbjct: 12 KMQKAVEVAKDELATVRTGRANPAMFSGIVVDYYGSPTPLNQLASISVPEARLVVIKPYD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
S L ++EKAI SDLG+ P+NDG++IR+++PQ+T ERRKE+ K+ + EEG++ +
Sbjct: 72 ASQLGAMEKAIRDSDLGVNPSNDGQLIRVSIPQMTEERRKEMVKLAKHKGEEGRITV 128
>gi|146297354|ref|YP_001181125.1| ribosome recycling factor [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|226703256|sp|A4XLZ9.1|RRF_CALS8 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|145410930|gb|ABP67934.1| ribosome recycling factor [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 184
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 82/117 (70%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M++ I+ ++ F +VR GR+NP +LDK+ V+YYG P + +A I P++ ++IQP++
Sbjct: 11 KMKKAIETLKEEFATVRAGRANPHILDKVMVDYYGVPTPIPQLASITVPEARMIVIQPWE 70
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
LK IEKAI +DLG+ P NDG+VIRL P+LT ERRKEL K V K AE+ KV +
Sbjct: 71 ARMLKEIEKAIQKADLGVNPANDGKVIRLIFPELTEERRKELVKQVKKMAEDAKVAI 127
>gi|225375366|ref|ZP_03752587.1| hypothetical protein ROSEINA2194_00991 [Roseburia inulinivorans DSM
16841]
gi|225212855|gb|EEG95209.1| hypothetical protein ROSEINA2194_00991 [Roseburia inulinivorans DSM
16841]
Length = 183
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 54/117 (46%), Positives = 84/117 (71%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M++T++ + F S+R GR+NP +LDK+ V+YYG+P ++ +A +N P+ + IQP++
Sbjct: 11 KMQKTMNNLSEEFGSIRAGRANPHVLDKLRVDYYGTPTPIQQVANVNVPEPRMIQIQPWE 70
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
S +K IEK I++SDLG+ P NDG+ IRL P+LT ERRK+L+K V K+ E KV +
Sbjct: 71 ASMVKEIEKVIMTSDLGINPTNDGKTIRLLFPELTEERRKDLAKDVKKKGESAKVAI 127
>gi|257126427|ref|YP_003164541.1| ribosome recycling factor [Leptotrichia buccalis C-1013-b]
gi|257050366|gb|ACV39550.1| ribosome recycling factor [Leptotrichia buccalis C-1013-b]
Length = 185
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 92/126 (73%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+I K+V+ +M+++++ +T F+ VR GR++ +MLD + VE YGSP L + ++ P++
Sbjct: 3 DAILKEVEEKMQKSVENTKTKFSHVRAGRASVSMLDGVTVEAYGSPTPLNQVGTVSAPEA 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
L+I P+DKS + +IEK I+ ++LG P+NDG++IRL +P+LT +RRKE K+V K+AE
Sbjct: 63 RLLVIDPWDKSLIPAIEKTILQANLGFNPSNDGKIIRLVVPELTEDRRKEYVKMVKKEAE 122
Query: 214 EGKVVM 219
EGKV +
Sbjct: 123 EGKVAI 128
>gi|410460706|ref|ZP_11314380.1| ribosome recycling factor [Bacillus azotoformans LMG 9581]
gi|409926760|gb|EKN63914.1| ribosome recycling factor [Bacillus azotoformans LMG 9581]
Length = 185
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 83/122 (68%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K+ K +M + I + +VR GR+NP++LD++ V YYG+P L ++ I P++ L+
Sbjct: 7 KNTKEKMNKAIQAFKRELATVRAGRANPSLLDRVSVNYYGAPTPLNQLSSITVPEARLLV 66
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
IQPYDKS L IEKAI+ +DLG+ P+NDG +IR+ +P LT ERRK L+K V AE+ K+
Sbjct: 67 IQPYDKSVLNDIEKAILKADLGLNPSNDGTIIRIAIPALTEERRKSLAKDVKAMAEDAKI 126
Query: 218 VM 219
+
Sbjct: 127 AI 128
>gi|269217144|ref|ZP_06160998.1| ribosome recycling factor [Slackia exigua ATCC 700122]
gi|402828084|ref|ZP_10876975.1| ribosome recycling factor [Slackia sp. CM382]
gi|269129281|gb|EEZ60366.1| ribosome recycling factor [Slackia exigua ATCC 700122]
gi|402286685|gb|EJU35147.1| ribosome recycling factor [Slackia sp. CM382]
Length = 186
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 84/116 (72%)
Query: 104 MERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDK 163
ME+ + ++ F VRTGR+N +LDK++V+YYG P + +A + PD+ L I+P+DK
Sbjct: 14 MEKALSNLKEAFAGVRTGRANAMVLDKVKVDYYGVPTPVNQMAAVKVPDAHMLTIEPWDK 73
Query: 164 SSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
S +++IE AI++SDLG+TP+NDG VIRL PQLT ERR++L+K +EEG+V +
Sbjct: 74 SMVRAIEAAILASDLGITPSNDGSVIRLPFPQLTEERRRDLAKQCKTFSEEGRVAV 129
>gi|138894772|ref|YP_001125225.1| ribosome recycling factor [Geobacillus thermodenitrificans NG80-2]
gi|196247605|ref|ZP_03146307.1| ribosome recycling factor [Geobacillus sp. G11MC16]
gi|166230789|sp|A4IMC6.1|RRF_GEOTN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|134266285|gb|ABO66480.1| Ribosome recycling factor [Geobacillus thermodenitrificans NG80-2]
gi|196212389|gb|EDY07146.1| ribosome recycling factor [Geobacillus sp. G11MC16]
Length = 185
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 85/119 (71%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K +M++ + +VR GR+N +L+K+ V+YYG + +A I+ P++ L+IQP
Sbjct: 10 KEKMDKAVQAFSRELATVRAGRANAGLLEKVTVDYYGVATPINQLATISVPEARMLVIQP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
YDKS +K +EKAI++SDLG+TP+NDG VIRL +P LT ERR+EL+K+V K +EE KV +
Sbjct: 70 YDKSVIKEMEKAILASDLGVTPSNDGSVIRLVIPPLTEERRRELAKLVKKYSEEAKVAV 128
>gi|253580861|ref|ZP_04858124.1| ribosome recycling factor [Ruminococcus sp. 5_1_39B_FAA]
gi|251847931|gb|EES75898.1| ribosome recycling factor [Ruminococcus sp. 5_1_39BFAA]
Length = 183
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 85/117 (72%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M++T+ + + ++R GR+NP +LDK+ V+YYG+P L+ +A I P++ + IQP++
Sbjct: 11 KMKKTLASLESELVTIRAGRANPHILDKLAVDYYGAPTPLQQVANITVPEARMIQIQPWE 70
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
S +K IEKAI++SDLG+ P+NDG+VIRL P+LT ERRKEL K V K+ E KV +
Sbjct: 71 SSLIKGIEKAILTSDLGLNPSNDGKVIRLVFPELTEERRKELVKDVKKKGEAAKVAV 127
>gi|355576057|ref|ZP_09045430.1| ribosome recycling factor [Olsenella sp. oral taxon 809 str. F0356]
gi|354817273|gb|EHF01783.1| ribosome recycling factor [Olsenella sp. oral taxon 809 str. F0356]
Length = 181
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 58/116 (50%), Positives = 85/116 (73%)
Query: 104 MERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDK 163
M++ +D++R NF VRTGR+N +LD I+V+YYG + +A + P++S L+++P+DK
Sbjct: 12 MDKCLDVLRGNFAKVRTGRANAHVLDGIKVDYYGQATPITQLAGVKVPEASMLVVEPWDK 71
Query: 164 SSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
++LKSIEKAI +SDLG+TP+NDG IRL P+ T ERR+EL K K AEE K+ +
Sbjct: 72 TALKSIEKAIEASDLGITPSNDGISIRLPFPKPTEERRRELVKDCNKYAEEAKIAI 127
>gi|314933438|ref|ZP_07840803.1| ribosome recycling factor [Staphylococcus caprae C87]
gi|313653588|gb|EFS17345.1| ribosome recycling factor [Staphylococcus caprae C87]
Length = 184
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/124 (47%), Positives = 89/124 (71%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
S I KD KARM+++ID + ++ GR+N +L+ + V+YYG+P ++ +A IN P++
Sbjct: 2 SDIIKDTKARMQKSIDNLSRELANISAGRANSNLLNGVTVDYYGAPTPVQQLASINVPEA 61
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
L+I PYDK+S+ IEKAI++++LG+ P +DGEVIR+++P LT ERRKEL K V K E
Sbjct: 62 RLLVISPYDKTSVDDIEKAIIAANLGVNPTSDGEVIRISVPALTEERRKELVKNVKKIGE 121
Query: 214 EGKV 217
+ KV
Sbjct: 122 DAKV 125
>gi|168705204|ref|ZP_02737481.1| Ribosome recycling factor [Gemmata obscuriglobus UQM 2246]
Length = 186
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 87/122 (71%)
Query: 96 IEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSS 155
I KD + RME+ +D+ R + +RTGR++P MLD + V+ YG+ ++ +A + PD+++
Sbjct: 6 ILKDTEDRMEKALDVFRNDLKGMRTGRASPQMLDSLRVDNYGTMSPIRDVASVTCPDAAT 65
Query: 156 LLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEG 215
++I+PY SLK IEKAI SSDLG+ PNNDG+VIRLT+P ++ ++RK++ V K AE
Sbjct: 66 IVIKPYAAESLKEIEKAIRSSDLGLAPNNDGKVIRLTMPAMSGDQRKKIVAAVKKSAESA 125
Query: 216 KV 217
KV
Sbjct: 126 KV 127
>gi|381164872|ref|ZP_09874102.1| ribosome recycling factor [Saccharomonospora azurea NA-128]
gi|418461548|ref|ZP_13032620.1| ribosome recycling factor [Saccharomonospora azurea SZMC 14600]
gi|359738418|gb|EHK87306.1| ribosome recycling factor [Saccharomonospora azurea SZMC 14600]
gi|379256777|gb|EHY90703.1| ribosome recycling factor [Saccharomonospora azurea NA-128]
Length = 185
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 80/119 (67%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + +ME+ + + + SVRTGR+ PAM ++ VEYYG+P L +A I P++ ++
Sbjct: 8 DAEEKMEKAVSFAKEDLASVRTGRATPAMFSRVVVEYYGAPTPLNQLASITIPEARMAVV 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
+PYD S L +IEKAI SDLG+ P NDG +IR+ +PQLT ERR+E+ KV + EE ++
Sbjct: 68 KPYDASQLNTIEKAIRDSDLGVNPTNDGNIIRVVIPQLTEERRREMVKVAKSKGEEARI 126
>gi|291523272|emb|CBK81565.1| ribosome recycling factor [Coprococcus catus GD/7]
Length = 185
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 51/117 (43%), Positives = 85/117 (72%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M++++D + + ++R GR+NP +LDK++V+YYG+P L+ + + P++ L+IQP++
Sbjct: 12 KMQKSLDALEREYTTIRAGRANPHILDKLKVDYYGTPTPLQQVGNVTVPEARVLMIQPWE 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
+K IEKAI++SD+G+TP NDG+ IRL P+LT ERRKEL+K V K+ + K +
Sbjct: 72 SKLIKDIEKAILASDIGITPTNDGKSIRLVFPELTEERRKELAKDVKKKGDAAKTAV 128
>gi|343926730|ref|ZP_08766227.1| ribosome-recycling factor [Gordonia alkanivorans NBRC 16433]
gi|343763329|dbj|GAA13153.1| ribosome-recycling factor [Gordonia alkanivorans NBRC 16433]
Length = 185
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 86/121 (71%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + +ME+ +++ + + S+RTGR+NPAM ++I +EYYGS + +A INTP+ ++I
Sbjct: 8 DAEEKMEKAVNVAKEDMGSIRTGRANPAMFNRINIEYYGSMTPVTQVASINTPEPRLVVI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
+PY+ S+L+ IE AI +SDLG+ P NDG +IR+ +PQLT ERR++L K + E+ KV
Sbjct: 68 KPYEASTLRDIETAIRNSDLGVNPTNDGTIIRVAIPQLTEERRRDLVKQAKGKGEDAKVA 127
Query: 219 M 219
+
Sbjct: 128 I 128
>gi|342732396|ref|YP_004771235.1| ribosome recycling factor [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|417961544|ref|ZP_12603950.1| Ribosome-recycling factor [Candidatus Arthromitus sp. SFB-2]
gi|417964780|ref|ZP_12606448.1| Ribosome-recycling factor [Candidatus Arthromitus sp. SFB-4]
gi|417967104|ref|ZP_12608294.1| Ribosome-recycling factor [Candidatus Arthromitus sp. SFB-5]
gi|417968399|ref|ZP_12609424.1| Ribosome-recycling factor [Candidatus Arthromitus sp. SFB-co]
gi|418016191|ref|ZP_12655756.1| ribosome recycling factor [Candidatus Arthromitus sp.
SFB-mouse-NYU]
gi|418372663|ref|ZP_12964755.1| Ribosome-recycling factor [Candidatus Arthromitus sp. SFB-mouse-SU]
gi|342329851|dbj|BAK56493.1| ribosome recycling factor [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|345506526|gb|EGX28820.1| ribosome recycling factor [Candidatus Arthromitus sp.
SFB-mouse-NYU]
gi|380333080|gb|EIA23739.1| Ribosome-recycling factor [Candidatus Arthromitus sp. SFB-2]
gi|380338068|gb|EIA27012.1| Ribosome-recycling factor [Candidatus Arthromitus sp. SFB-5]
gi|380339763|gb|EIA28445.1| Ribosome-recycling factor [Candidatus Arthromitus sp. SFB-co]
gi|380340090|gb|EIA28723.1| Ribosome-recycling factor [Candidatus Arthromitus sp. SFB-4]
gi|380342332|gb|EIA30777.1| Ribosome-recycling factor [Candidatus Arthromitus sp. SFB-mouse-SU]
Length = 185
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 60/120 (50%), Positives = 84/120 (70%)
Query: 100 VKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQ 159
+K +M +T+D++ SVR GR+NP MLD++EVEYYG L +A I+TP+S L+IQ
Sbjct: 9 LKEKMLKTMDVLVGELGSVRVGRANPNMLDRVEVEYYGVMTRLNQLANISTPESRILMIQ 68
Query: 160 PYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
P++K+ LK IEKAI+ SDLG+ PNNDG IRL +P++T E R+ K K AE+ KV +
Sbjct: 69 PWEKNILKDIEKAILKSDLGLMPNNDGSSIRLIIPEMTEETRRNTVKKAKKIAEDSKVAL 128
>gi|317484674|ref|ZP_07943575.1| ribosome recycling factor [Bilophila wadsworthia 3_1_6]
gi|316924030|gb|EFV45215.1| ribosome recycling factor [Bilophila wadsworthia 3_1_6]
Length = 186
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 90/128 (70%)
Query: 92 EKSSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTP 151
+K S+ D + RM++ + + +F+ +RTGR++ ++D I+V+YYG+P + +A + P
Sbjct: 2 DKESVLLDSEDRMDKALGALDRDFSRLRTGRASTGLVDNIKVDYYGTPTPISQLASVAIP 61
Query: 152 DSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQ 211
DS ++ IQP+D+ + +EKAI+ SDLG+TP NDG++IR+++P LT +RRKEL K+ K
Sbjct: 62 DSRTITIQPWDRGAFAGVEKAILKSDLGLTPVNDGKIIRISIPPLTEDRRKELGKLARKS 121
Query: 212 AEEGKVVM 219
EE KV +
Sbjct: 122 GEEAKVAV 129
>gi|223044216|ref|ZP_03614253.1| ribosome recycling factor [Staphylococcus capitis SK14]
gi|417907099|ref|ZP_12550875.1| ribosome recycling factor [Staphylococcus capitis VCU116]
gi|222442366|gb|EEE48474.1| ribosome recycling factor [Staphylococcus capitis SK14]
gi|341596730|gb|EGS39321.1| ribosome recycling factor [Staphylococcus capitis VCU116]
Length = 184
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/124 (47%), Positives = 89/124 (71%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
S I KD KARM+++ID + ++ GR+N +L+ + V+YYG+P ++ +A IN P++
Sbjct: 2 SDIIKDTKARMQKSIDNLSRELANISAGRANSNLLNGVTVDYYGAPTPVQQLASINVPEA 61
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
L+I PYDK+S+ IEKAI++++LG+ P +DGEVIR+++P LT ERRKEL K V K E
Sbjct: 62 RLLVISPYDKTSVDDIEKAIIAANLGVNPTSDGEVIRISVPALTEERRKELVKNVKKIGE 121
Query: 214 EGKV 217
+ KV
Sbjct: 122 DAKV 125
>gi|339444269|ref|YP_004710273.1| hypothetical protein EGYY_06710 [Eggerthella sp. YY7918]
gi|338904021|dbj|BAK43872.1| hypothetical protein EGYY_06710 [Eggerthella sp. YY7918]
Length = 185
Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 60/126 (47%), Positives = 85/126 (67%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+ I + + RM++ + + F SVRTGR+N +LD+I+V+YYG P + +A I TPD+
Sbjct: 3 NDILEQAEGRMQKALSSLGDAFGSVRTGRANAMVLDRIKVDYYGVPTPVNQMAGIKTPDA 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
L+I+P+DK L +IE AI+ SDLG+TP+NDG VIRL P LT ERR+EL K AE
Sbjct: 63 HMLVIEPWDKGVLGAIEHAILESDLGVTPSNDGTVIRLPFPSLTEERRRELVKQCKTYAE 122
Query: 214 EGKVVM 219
E +V +
Sbjct: 123 EARVAV 128
>gi|421860619|ref|ZP_16292725.1| ribosome recycling factor [Paenibacillus popilliae ATCC 14706]
gi|410829805|dbj|GAC43162.1| ribosome recycling factor [Paenibacillus popilliae ATCC 14706]
Length = 184
Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 58/125 (46%), Positives = 88/125 (70%)
Query: 95 SIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSS 154
S++K + RME+ I ++ + + R GR++ A+LD+I+VEYYG+ + +A I+TPD
Sbjct: 4 SVKKHAEERMEKAIVALKRDLATQRAGRASAALLDRIQVEYYGAMTPINQLANISTPDPR 63
Query: 155 SLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEE 214
+LLIQP+D SSL IE+A++ SDLG+TP NDG +IR+++P LT ERR EL + K E+
Sbjct: 64 TLLIQPWDNSSLGEIERAVMKSDLGLTPANDGSIIRISIPALTQERRTELVRQTKKFGED 123
Query: 215 GKVVM 219
KV +
Sbjct: 124 AKVAI 128
>gi|336395301|ref|ZP_08576700.1| ribosome recycling factor [Lactobacillus farciminis KCTC 3681]
Length = 185
Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 83/119 (69%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K M +++D++ ++R G++N ++L + V YYG+ V L +A IN P++ L+I P
Sbjct: 10 KENMSKSVDVLSRELANIRAGKANASILSNVRVMYYGTEVPLNQVASINIPEARVLMITP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
YDKSSL IE AI SSDLG+ P NDG VIRL +PQLT ERR+E++K V K+AE G++ +
Sbjct: 70 YDKSSLDDIEHAINSSDLGLNPANDGSVIRLVIPQLTGERRQEIAKQVGKEAESGRIAV 128
>gi|310823274|ref|YP_003955632.1| ribosome-recycling factor [Stigmatella aurantiaca DW4/3-1]
gi|309396346|gb|ADO73805.1| Ribosome-recycling factor [Stigmatella aurantiaca DW4/3-1]
Length = 186
Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 87/122 (71%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K++K R+++T+D ++ VRTGR++ A+LD + V+YYG+P L +A +N P+ +
Sbjct: 8 KELKGRIDKTLDDLKRELAKVRTGRASTAILDGVRVDYYGTPTPLAGVASVNAPEPRLIT 67
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
I+P+DKSSLK IEKA+ ++LG+ P NDGE+IRL P LT ERRK+++K V + EE KV
Sbjct: 68 IKPFDKSSLKEIEKALREANLGINPMNDGEMIRLPFPPLTEERRKDIAKQVKSKGEEHKV 127
Query: 218 VM 219
+
Sbjct: 128 AI 129
>gi|159478729|ref|XP_001697453.1| predicted protein [Chlamydomonas reinhardtii]
gi|158274332|gb|EDP00115.1| predicted protein [Chlamydomonas reinhardtii]
Length = 175
Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 81/106 (76%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
RM++ + +V FN++RTGR+NPA+LDKI V+Y+G+P LK + + PD+S+L+I P+D
Sbjct: 3 RMKKCLAVVGDGFNTIRTGRANPAILDKITVDYFGAPTPLKQMGTVTVPDASTLMITPFD 62
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVV 208
K+SL+ IE+AI SD+G+ PNNDGE IRL +P +T RR++ + +V
Sbjct: 63 KTSLRDIERAIQESDIGINPNNDGERIRLIMPPMTQVRRRDGAHLV 108
>gi|377567899|ref|ZP_09797101.1| ribosome-recycling factor [Gordonia terrae NBRC 100016]
gi|377534922|dbj|GAB42266.1| ribosome-recycling factor [Gordonia terrae NBRC 100016]
Length = 185
Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 86/121 (71%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + +ME+ +++ + + S+RTGR+NPAM +K+ +EYYGS + +A INTP+ ++I
Sbjct: 8 DAEEKMEKAVNVAKEDMGSIRTGRANPAMFNKVNIEYYGSLTPVTQVASINTPEPRLVVI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
+PY+ S+L+ IE AI +SDLG+ P NDG +IR+ +PQLT ERR++L K + E+ KV
Sbjct: 68 KPYEASTLRDIETAIRNSDLGVNPTNDGTIIRVAVPQLTEERRRDLVKQAKGKGEDAKVA 127
Query: 219 M 219
+
Sbjct: 128 I 128
>gi|408356831|ref|YP_006845362.1| ribosome-recycling factor [Amphibacillus xylanus NBRC 15112]
gi|407727602|dbj|BAM47600.1| ribosome-recycling factor [Amphibacillus xylanus NBRC 15112]
Length = 185
Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 56/123 (45%), Positives = 88/123 (71%)
Query: 95 SIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSS 154
+I K+++ RM++ I + + +VR GR+NPA+L+ + V+YYG+P L +A I P++
Sbjct: 4 AIIKEIQQRMDQAIQSFKRSLATVRAGRANPAILNHVMVDYYGAPTPLNQLATITAPEAR 63
Query: 155 SLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEE 214
+++ P+DKSS+ +EKAI +DLG+ P++DG ++R+ +P LT ERRKEL KVV K AEE
Sbjct: 64 LIVVTPFDKSSIGEVEKAIQKADLGLAPSSDGNIVRIVIPALTEERRKELVKVVGKFAEE 123
Query: 215 GKV 217
KV
Sbjct: 124 SKV 126
>gi|444306121|ref|ZP_21141893.1| ribosome recycling factor [Arthrobacter sp. SJCon]
gi|443481579|gb|ELT44502.1| ribosome recycling factor [Arthrobacter sp. SJCon]
Length = 185
Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 86/115 (74%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M++ +++ + +F +VRTGR+NP + +K+ V+YYGSP L+ +A PD+ ++LI P+D
Sbjct: 12 KMDKAVEVAKEDFAAVRTGRANPGLYNKVLVDYYGSPTPLQQLASFAIPDARTILITPFD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
K++++ IE+A+ S++G P+NDG VIR+T+P+LT ERRKE K+V + E+ K+
Sbjct: 72 KTAMRDIERALSDSEVGANPSNDGNVIRITIPELTKERRKEYVKIVKTKGEDAKI 126
>gi|283769070|ref|ZP_06341976.1| ribosome recycling factor [Bulleidia extructa W1219]
gi|283104427|gb|EFC05804.1| ribosome recycling factor [Bulleidia extructa W1219]
Length = 182
Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 84/115 (73%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M++ +D +++ N+VRTG +N ++D++E +YYG+P L IA I+ + +++I+PYD
Sbjct: 12 KMDKVMDHLQSELNTVRTGMANAKLMDRVEADYYGTPTPLNQIAGISVSEGRTIVIKPYD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
SSLK IE+A ++LGM P NDG VIRLT+PQLT E RKE+SK V + AEE K+
Sbjct: 72 PSSLKEIERACNEANLGMAPQNDGTVIRLTVPQLTGETRKEMSKKVGQIAEESKI 126
>gi|218288327|ref|ZP_03492626.1| ribosome recycling factor [Alicyclobacillus acidocaldarius LAA1]
gi|218241686|gb|EED08859.1| ribosome recycling factor [Alicyclobacillus acidocaldarius LAA1]
Length = 187
Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 85/122 (69%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
++++ RM++ I +R F +VR GR+ P+MLD + VEYYG+ + + +A + +P+ L+
Sbjct: 9 QNLQERMDKAIQNLRREFATVRAGRAAPSMLDHVMVEYYGAQMPVNQVASVTSPEPRLLV 68
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
I P+DKS L IEKAI SDLG+ P NDG VIRLT+P LT +RR+EL K V K AEE +V
Sbjct: 69 ISPWDKSMLSEIEKAIQKSDLGLNPANDGNVIRLTIPALTEQRRQELVKQVRKMAEEARV 128
Query: 218 VM 219
+
Sbjct: 129 AI 130
>gi|94985150|ref|YP_604514.1| ribosome recycling factor [Deinococcus geothermalis DSM 11300]
gi|166230783|sp|Q1IZI9.1|RRF_DEIGD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|94555431|gb|ABF45345.1| ribosome recycling factor [Deinococcus geothermalis DSM 11300]
Length = 183
Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 58/125 (46%), Positives = 85/125 (68%)
Query: 95 SIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSS 154
+I+ D + RM + I+ + N + +RTGR+NP +L K+ VEYYGS + + +A I TPD+
Sbjct: 6 AIQADARERMGKAIEALENNLSVLRTGRANPGILKKVMVEYYGSSMPIDQVASITTPDAR 65
Query: 155 SLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEE 214
+L+I P+D+ +L IEKAI SDLG+ PNN G+ I ++LP LT ERRK+L K AEE
Sbjct: 66 TLVITPWDRGALNPIEKAIRDSDLGLNPNNKGDTIFISLPMLTEERRKDLVKNAKNYAEE 125
Query: 215 GKVVM 219
+V +
Sbjct: 126 ARVAI 130
>gi|258511403|ref|YP_003184837.1| ribosome recycling factor [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257478129|gb|ACV58448.1| ribosome recycling factor [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 187
Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 85/122 (69%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
++++ RM++ I +R F +VR GR+ P+MLD + VEYYG+ + + +A + +P+ L+
Sbjct: 9 QNLQERMDKAIQNLRREFATVRAGRAAPSMLDHVMVEYYGAQMPVNQVASVTSPEPRLLV 68
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
I P+DKS L IEKAI SDLG+ P NDG VIRLT+P LT +RR+EL K V K AEE +V
Sbjct: 69 ISPWDKSMLSEIEKAIQKSDLGLNPANDGNVIRLTIPALTEQRRQELVKQVRKMAEEARV 128
Query: 218 VM 219
+
Sbjct: 129 AI 130
>gi|366053241|ref|ZP_09450963.1| ribosome recycling factor [Lactobacillus suebicus KCTC 3549]
Length = 187
Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 56/121 (46%), Positives = 87/121 (71%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+ K +ME++ D ++ ++R GR+N ++L+++ V+YYG+ + +A I+ P++ LLI
Sbjct: 10 EAKNKMEKSADSLQRELGNIRAGRANASILNRVSVDYYGAQTPINQVASISIPEARMLLI 69
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
PYDK+ L+SIE+AI +SDLG+TP NDG IRL++PQLT +RRKEL K V Q E+ KV
Sbjct: 70 TPYDKTQLESIEQAIFASDLGLTPANDGSAIRLSIPQLTEDRRKELVKDVKAQTEQAKVA 129
Query: 219 M 219
+
Sbjct: 130 V 130
>gi|384135103|ref|YP_005517817.1| ribosome recycling factor [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
gi|339289188|gb|AEJ43298.1| ribosome recycling factor [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
Length = 185
Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 85/122 (69%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
++++ RM++ I +R F +VR GR+ P+MLD + VEYYG+ + + +A + +P+ L+
Sbjct: 7 QNLQERMDKAIQNLRREFATVRAGRAAPSMLDHVMVEYYGAQMPVNQVASVTSPEPRLLV 66
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
I P+DKS L IEKAI SDLG+ P NDG VIRLT+P LT +RR+EL K V K AEE +V
Sbjct: 67 ISPWDKSMLSEIEKAIQKSDLGLNPANDGNVIRLTIPALTEQRRQELVKQVRKMAEEARV 126
Query: 218 VM 219
+
Sbjct: 127 AI 128
>gi|217967587|ref|YP_002353093.1| ribosome recycling factor [Dictyoglomus turgidum DSM 6724]
gi|217336686|gb|ACK42479.1| ribosome recycling factor [Dictyoglomus turgidum DSM 6724]
Length = 185
Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 89/122 (72%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K+++ +M++ +++V+ F ++RTG+ + + D+I+V YYG+ + L +A + + ++L
Sbjct: 7 KEIEEKMKKAVEVVKKEFQNIRTGKPSVGIFDEIKVSYYGNMMPLNQVATLKVAEGRTVL 66
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
IQP+DKS + IEKAI+ S+LG+TP NDG+VIR+ P LT ERRKEL K+V K+AE G+V
Sbjct: 67 IQPWDKSIIGEIEKAILKSELGLTPQNDGQVIRVVFPPLTEERRKELVKIVHKEAETGRV 126
Query: 218 VM 219
+
Sbjct: 127 AI 128
>gi|357406286|ref|YP_004918210.1| ribosome recycling factor [Methylomicrobium alcaliphilum 20Z]
gi|351718951|emb|CCE24625.1| Ribosome recycling factor (Ribosome-releasing factor) (RRF)
[Methylomicrobium alcaliphilum 20Z]
Length = 185
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 92/126 (73%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
S I +D RM ++++ +R F +RTGR++P++LD+I V YYG+ L +A + T DS
Sbjct: 3 SDILQDAAKRMGKSVEALRHEFTKIRTGRAHPSLLDQITVPYYGADTPLSQVANVATEDS 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
+L + P++K+ +K++EKAI++SDLG+ P+++G VIR+ LP LT ERR++L KVV ++AE
Sbjct: 63 RTLTVTPWEKTIVKAVEKAIMASDLGLNPSSNGNVIRIPLPPLTEERRRDLVKVVKQEAE 122
Query: 214 EGKVVM 219
G+V +
Sbjct: 123 NGRVAI 128
>gi|171780175|ref|ZP_02921079.1| hypothetical protein STRINF_01963 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|379705770|ref|YP_005204229.1| ribosome recycling factor [Streptococcus infantarius subsp.
infantarius CJ18]
gi|171281523|gb|EDT46958.1| ribosome recycling factor [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|374682469|gb|AEZ62758.1| ribosome recycling factor [Streptococcus infantarius subsp.
infantarius CJ18]
Length = 185
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 64/124 (51%), Positives = 84/124 (67%), Gaps = 1/124 (0%)
Query: 96 IEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSS 155
IEK K R E++ + F ++R GR+N ++LD+I+VEYYG+ L +A I P++
Sbjct: 6 IEK-AKERFEQSHSSLAREFAAIRAGRANASLLDRIQVEYYGAMTPLNQLASITVPEARV 64
Query: 156 LLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEG 215
LLI P+DKSSLK IE AI +SDLG+TP NDG VIRL +P LT E RKEL+K V K E
Sbjct: 65 LLISPFDKSSLKDIEHAINASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGENA 124
Query: 216 KVVM 219
KV +
Sbjct: 125 KVAI 128
>gi|359768025|ref|ZP_09271805.1| ribosome-recycling factor [Gordonia polyisoprenivorans NBRC 16320]
gi|378717527|ref|YP_005282416.1| ribosome-recycling factor Frr [Gordonia polyisoprenivorans VH2]
gi|359314602|dbj|GAB24638.1| ribosome-recycling factor [Gordonia polyisoprenivorans NBRC 16320]
gi|375752230|gb|AFA73050.1| ribosome-recycling factor Frr [Gordonia polyisoprenivorans VH2]
Length = 185
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 85/119 (71%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + +ME+ +++ R + S+RTGR+NPAM +K+ +EYYG+ + +A INTP+ ++I
Sbjct: 8 DAEEKMEKAVNVAREDMGSIRTGRANPAMFNKVVIEYYGAMTPITQVASINTPEPRLVVI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
+PY+ S+L+ IE AI +SDLG+ P NDG +IR+ +PQLT ERRK+L K + E+ KV
Sbjct: 68 KPYEASTLRDIETAIRNSDLGVNPTNDGTLIRVAVPQLTEERRKDLVKQAKGKGEDAKV 126
>gi|325001877|ref|ZP_08122989.1| ribosome recycling factor [Pseudonocardia sp. P1]
Length = 185
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 86/121 (71%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
DV+ +ME+ + + R + VRTGR+ P+M +I V+YYG+ L +A ++ P++ +I
Sbjct: 8 DVEEKMEKAVGVARDDLTGVRTGRATPSMFSRIVVDYYGAATPLNQLASVSIPEARMAVI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
+PYD S LK++EKAI SDLG+ P+NDG++IR+ +PQL+ ERR+++ KV + E+ +VV
Sbjct: 68 KPYDASQLKAMEKAIAESDLGVNPSNDGQIIRVIIPQLSEERRRDMVKVARGKGEDARVV 127
Query: 219 M 219
M
Sbjct: 128 M 128
>gi|206900181|ref|YP_002250924.1| ribosome recycling factor [Dictyoglomus thermophilum H-6-12]
gi|206739284|gb|ACI18342.1| ribosome recycling factor [Dictyoglomus thermophilum H-6-12]
Length = 185
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 88/122 (72%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K+++ +M++ +++V+ F +RTG+ + + D+I++ YYG+ + L +A + + ++L
Sbjct: 7 KEIEEKMKKAVEVVKKEFQGIRTGKPSIGIFDEIKISYYGNMMPLNQVATLKIAEGRTVL 66
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
IQP+DKS + IEKAI+ S+LG+TP NDG+VIR+ P LT ERRKEL KVV K+AE G+V
Sbjct: 67 IQPWDKSIIGEIEKAILKSELGLTPQNDGQVIRVVFPPLTEERRKELVKVVHKEAENGRV 126
Query: 218 VM 219
+
Sbjct: 127 AI 128
>gi|291547840|emb|CBL20948.1| ribosome recycling factor [Ruminococcus sp. SR1/5]
Length = 183
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 55/117 (47%), Positives = 86/117 (73%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M +T++ + + ++R GR+NP +LDK+ V+YYG+P L+ +A I+ P++ + IQP++
Sbjct: 11 KMGKTLNALESELTTIRAGRANPHILDKLTVDYYGAPTPLQQVANISVPEARMIQIQPWE 70
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
S +K+IEKAI+ SDLG+ P+NDG++IRL P+LT ERRKEL K V K+ E KV +
Sbjct: 71 SSMIKAIEKAILCSDLGLNPSNDGKMIRLVFPELTEERRKELVKDVKKKGEGAKVAV 127
>gi|222152659|ref|YP_002561834.1| ribosome recycling factor [Streptococcus uberis 0140J]
gi|254809534|sp|B9DRF1.1|RRF_STRU0 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|222113470|emb|CAR41195.1| ribosome recycling factor [Streptococcus uberis 0140J]
Length = 185
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 59/117 (50%), Positives = 81/117 (69%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
R E++ + + S+R GR+N ++LD+I+VEYYG P L +A I P++ LLI P+D
Sbjct: 12 RFEQSFQSLSREYASIRAGRANASLLDRIQVEYYGVPTPLNQLASITVPEARVLLISPFD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
KSS+K IE+AI +SDLG+TP NDG VIRL +P LT E RKEL+K V K E K+ +
Sbjct: 72 KSSIKDIERAINASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGENQKIAI 128
>gi|332298055|ref|YP_004439977.1| Ribosome-recycling factor [Treponema brennaborense DSM 12168]
gi|332181158|gb|AEE16846.1| Ribosome-recycling factor [Treponema brennaborense DSM 12168]
Length = 183
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 87/118 (73%)
Query: 102 ARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPY 161
ARME+TI ++ +F ++RTGR++ A+ DK+ V+YYG+P L ++ I+ P++ S++IQP+
Sbjct: 9 ARMEKTIAALKDDFKTLRTGRASAAIFDKVRVDYYGTPTPLNQVSTISVPEARSIVIQPF 68
Query: 162 DKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
DKS + IEKAI S+LG+ P+NDG+VIR+ +P LT++RRKEL K AE +V +
Sbjct: 69 DKSLIGEIEKAIQKSELGLNPSNDGKVIRIAIPPLTADRRKELVKQAKATAENSRVAI 126
>gi|326798845|ref|YP_004316664.1| ribosome-recycling factor [Sphingobacterium sp. 21]
gi|326549609|gb|ADZ77994.1| Ribosome-recycling factor [Sphingobacterium sp. 21]
Length = 187
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 84/122 (68%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
+D M++ I + +R G++ P+MLD I V+YYG+P L + INTPD SL+
Sbjct: 10 EDANDSMQKAISHTESELTKIRAGKAMPSMLDGINVDYYGTPTPLSQVGNINTPDPRSLV 69
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
IQP++K+ L +IE+AI+ S++G+ P NDG +IRL +P LT ERR+EL + V ++AE+GKV
Sbjct: 70 IQPWEKNLLSAIERAIIDSNIGLNPQNDGNIIRLAVPPLTEERRRELVRKVKEEAEKGKV 129
Query: 218 VM 219
+
Sbjct: 130 AI 131
>gi|335419068|ref|ZP_08550126.1| ribosome recycling factor [Salinisphaera shabanensis E1L3A]
gi|334897203|gb|EGM35339.1| ribosome recycling factor [Salinisphaera shabanensis E1L3A]
Length = 185
Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 92/126 (73%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
I D + RM++TI+++R NF+ +RTGR++ ++LD + V+YYGS V L A I+ D+
Sbjct: 3 DEIYSDAQQRMDKTINVMRDNFSKIRTGRASTSLLDHVTVDYYGSEVPLNQAANISLEDA 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
++ IQP++KS ++ +EKAI+ +DLG+ P+ G+VIR+ LP LT +RRK+L KV+ +AE
Sbjct: 63 RTITIQPWEKSMVQPVEKAIMKADLGLNPSTAGQVIRVVLPPLTEDRRKDLVKVIRAEAE 122
Query: 214 EGKVVM 219
+G+V +
Sbjct: 123 DGRVAI 128
>gi|410727072|ref|ZP_11365295.1| ribosome recycling factor [Clostridium sp. Maddingley MBC34-26]
gi|410599407|gb|EKQ53960.1| ribosome recycling factor [Clostridium sp. Maddingley MBC34-26]
Length = 185
Score = 125 bits (315), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 58/125 (46%), Positives = 89/125 (71%)
Query: 95 SIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSS 154
I K+ + +M++TI +++++ ++++ GR+NP MLD+I+VEYYGS L +A ++ P+
Sbjct: 4 DIIKNAEEKMKKTISVLQSDLSTMKAGRANPTMLDRIQVEYYGSMCPLSQVANVSAPEPR 63
Query: 155 SLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEE 214
L+I P++K LK IEKAI+ SDLG+ P+NDG +IRL +P+LT E RK L K V K EE
Sbjct: 64 VLMITPWEKPLLKEIEKAILKSDLGLNPSNDGSIIRLVIPELTEETRKALVKNVKKTGEE 123
Query: 215 GKVVM 219
KV +
Sbjct: 124 AKVAV 128
>gi|323484222|ref|ZP_08089591.1| hypothetical protein HMPREF9474_01342 [Clostridium symbiosum
WAL-14163]
gi|323692104|ref|ZP_08106351.1| ribosome recycling factor [Clostridium symbiosum WAL-14673]
gi|355627695|ref|ZP_09049382.1| ribosome-recycling factor [Clostridium sp. 7_3_54FAA]
gi|323402464|gb|EGA94793.1| hypothetical protein HMPREF9474_01342 [Clostridium symbiosum
WAL-14163]
gi|323503904|gb|EGB19719.1| ribosome recycling factor [Clostridium symbiosum WAL-14673]
gi|354820160|gb|EHF04584.1| ribosome-recycling factor [Clostridium sp. 7_3_54FAA]
Length = 184
Score = 125 bits (315), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 55/117 (47%), Positives = 85/117 (72%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M ++ +++ + S+R GR+NP +LDK+ V+YYG+P L+ +A ++ P+ +LIQP++
Sbjct: 11 KMVKSYEVLLDEYASIRAGRANPHVLDKLRVDYYGTPTPLQQVANVSVPEPRMILIQPWE 70
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
+ +K IEKAI++SDLG+ PNNDG IRL P+LT ERRKEL+K V K+ E KV +
Sbjct: 71 RKLIKDIEKAILTSDLGINPNNDGNAIRLVFPELTEERRKELAKDVKKKGEGVKVAV 127
>gi|260437176|ref|ZP_05790992.1| ribosome recycling factor [Butyrivibrio crossotus DSM 2876]
gi|292810489|gb|EFF69694.1| ribosome recycling factor [Butyrivibrio crossotus DSM 2876]
Length = 184
Score = 125 bits (315), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 89/126 (70%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
S I K + +M ++ D + ++ ++R GR+NP +LDK++V+YYG+P + +A ++ P++
Sbjct: 2 SEIIKTYEEKMIKSCDTLAADYVTIRAGRANPHILDKLKVDYYGTPTPFQQVANVSVPEA 61
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
+ IQP++ S LK IEKAI+ SDLG+TP NDG+VIRL P+LT +RRKEL K + K+ E
Sbjct: 62 RMIQIQPWETSLLKEIEKAILMSDLGLTPTNDGKVIRLVFPELTEDRRKELVKDIKKKGE 121
Query: 214 EGKVVM 219
KV +
Sbjct: 122 NTKVAI 127
>gi|333395046|ref|ZP_08476865.1| ribosome recycling factor [Lactobacillus coryniformis subsp.
coryniformis KCTC 3167]
Length = 186
Score = 125 bits (315), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 87/121 (71%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+ + +M + + ++ +R GR+N ++L+++ V+YYG+P + +A I P++ L+I
Sbjct: 9 EAQQKMVKAEEALQRELGQIRAGRANASILNRVTVDYYGAPTPVNQLATITIPEARVLMI 68
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
PYDKS+LK IE+AI++SDLG++P NDG VIRL +PQLT +RR+EL+K V KQ EE K+
Sbjct: 69 TPYDKSTLKEIERAILASDLGLSPANDGTVIRLVIPQLTQDRREELAKDVKKQTEEAKIA 128
Query: 219 M 219
+
Sbjct: 129 I 129
>gi|315924376|ref|ZP_07920598.1| ribosome recycling factor [Pseudoramibacter alactolyticus ATCC
23263]
gi|315622255|gb|EFV02214.1| ribosome recycling factor [Pseudoramibacter alactolyticus ATCC
23263]
Length = 185
Score = 125 bits (315), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 85/117 (72%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M + ++ + + N++R GR+N +LDK+ V+YYG+P ++ +A + P++ + +QPYD
Sbjct: 12 KMNKALENLSGSLNTLRAGRANAHILDKVTVDYYGAPTAINQLATVAAPEARLITVQPYD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
++L +IEKAI+++DLG P+NDG++IRL +PQLT ERRKEL K+ K EE KV M
Sbjct: 72 TTALPAIEKAILTADLGFNPSNDGKIIRLAVPQLTEERRKELVKLTKKYGEECKVAM 128
>gi|400289788|ref|ZP_10791815.1| ribosome recycling factor [Streptococcus ratti FA-1 = DSM 20564]
gi|399920579|gb|EJN93396.1| ribosome recycling factor [Streptococcus ratti FA-1 = DSM 20564]
Length = 185
Score = 125 bits (315), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 61/124 (49%), Positives = 84/124 (67%), Gaps = 1/124 (0%)
Query: 96 IEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSS 155
IEK K R E++ + F S+R GR+N ++LD+IEVEYYG+P L +A I P++
Sbjct: 6 IEK-TKERFEQSHQSLAREFGSIRAGRANASLLDRIEVEYYGAPTPLNQLASITVPEARV 64
Query: 156 LLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEG 215
LL+ P+DKSSLK IE AI +SD+G+ P NDG VIRL +P LT E R++L+K V K E
Sbjct: 65 LLVSPFDKSSLKDIEHAINASDIGINPANDGSVIRLVIPALTEETRRDLAKEVKKVGENA 124
Query: 216 KVVM 219
K+ +
Sbjct: 125 KIAI 128
>gi|227872428|ref|ZP_03990772.1| ribosome recycling factor [Oribacterium sinus F0268]
gi|227841725|gb|EEJ52011.1| ribosome recycling factor [Oribacterium sinus F0268]
Length = 184
Score = 125 bits (315), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 55/117 (47%), Positives = 83/117 (70%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M +T D + + ++R GR+NP +LD+I V+YYG+P ++ + ++ P++ L IQP+D
Sbjct: 11 KMHKTHDNLMSELGTIRAGRANPHVLDRIMVDYYGTPTPIQQVGNVSVPEARILQIQPWD 70
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
KS +K IEKAI S+LG+ P NDG+VIRL P+LT ERRKEL+K V K+ E K+ +
Sbjct: 71 KSVMKEIEKAINMSELGINPTNDGQVIRLVFPELTEERRKELTKDVKKKGEAAKIAI 127
>gi|167766543|ref|ZP_02438596.1| hypothetical protein CLOSS21_01049 [Clostridium sp. SS2/1]
gi|317498945|ref|ZP_07957228.1| ribosome recycling factor [Lachnospiraceae bacterium 5_1_63FAA]
gi|429762653|ref|ZP_19295039.1| ribosome recycling factor [Anaerostipes hadrus DSM 3319]
gi|167711666|gb|EDS22245.1| ribosome recycling factor [Clostridium sp. SS2/1]
gi|291558581|emb|CBL37381.1| ribosome recycling factor [butyrate-producing bacterium SSC/2]
gi|316893778|gb|EFV15977.1| ribosome recycling factor [Lachnospiraceae bacterium 5_1_63FAA]
gi|429181287|gb|EKY22459.1| ribosome recycling factor [Anaerostipes hadrus DSM 3319]
Length = 181
Score = 125 bits (315), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 88/122 (72%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K + +M++++D + +F ++R GR+NP +LDK++V+YYG + + ++ P++ +++
Sbjct: 3 KQFEDKMQKSLDSMANDFMTIRAGRANPHVLDKVKVDYYGVATPVAQVGNVSVPEARTIM 62
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
IQP++ + LK IEKAI+ SD+G+TP NDG+ IRL P LT ERRKEL+K V K+ EE KV
Sbjct: 63 IQPWEPNLLKEIEKAILVSDIGITPTNDGKAIRLNFPDLTEERRKELAKDVKKRGEEAKV 122
Query: 218 VM 219
+
Sbjct: 123 AV 124
>gi|452995278|emb|CCQ93045.1| ribosome recycling factor [Clostridium ultunense Esp]
Length = 185
Score = 125 bits (315), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 57/123 (46%), Positives = 88/123 (71%)
Query: 95 SIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSS 154
+ K+ + +M++T+++ + S+R GR+NPA+LD+I ++YYG+ LK +A I+ P+
Sbjct: 4 DVHKESEEKMKKTVEVYKEELKSIRAGRANPALLDQISIDYYGTDTPLKQLASISAPEPR 63
Query: 155 SLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEE 214
L+IQP+D + + IEK I+ SDLG+ P+NDG++IRL +P LT ERRKEL KVV K AE
Sbjct: 64 LLIIQPWDINLISVIEKEILKSDLGLNPSNDGKLIRLPIPLLTEERRKELVKVVRKSAES 123
Query: 215 GKV 217
K+
Sbjct: 124 AKI 126
>gi|336393823|ref|ZP_08575222.1| ribosome recycling factor [Lactobacillus coryniformis subsp.
torquens KCTC 3535]
Length = 186
Score = 125 bits (315), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 87/121 (71%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+ + +M + + ++ +R GR+N ++L+++ V+YYG+P + +A I P++ L+I
Sbjct: 9 EAQQKMVKAEEALQRELGQIRAGRANASILNRVTVDYYGAPTPVNQLATITIPEARVLMI 68
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
PYDKS+LK IE+AI++SDLG++P NDG VIRL +PQLT +RR+EL+K V KQ EE K+
Sbjct: 69 TPYDKSTLKEIERAILASDLGLSPANDGTVIRLVIPQLTQDRREELAKNVKKQTEEAKIA 128
Query: 219 M 219
+
Sbjct: 129 I 129
>gi|54297625|ref|YP_123994.1| ribosome recycling factor [Legionella pneumophila str. Paris]
gi|60390234|sp|Q5X4K0.1|RRF_LEGPA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|53751410|emb|CAH12828.1| Ribosome recycling factor [Legionella pneumophila str. Paris]
Length = 185
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/124 (45%), Positives = 90/124 (72%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+ I++D + RM++TI+ + ++ + +RTGR+N ++LD + V+YYGSP L +A I T DS
Sbjct: 3 NEIKQDSEKRMKKTIEALHSDMSKIRTGRANASLLDHVMVDYYGSPTPLSQVANITTSDS 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
++L+ P++KS + +IEKAI++SDLG+ P G IR+ +P LT ERRKEL KVV + E
Sbjct: 63 RTILVTPWEKSMVAAIEKAILNSDLGLNPATAGTAIRVPMPPLTEERRKELIKVVRHEGE 122
Query: 214 EGKV 217
+G+V
Sbjct: 123 QGRV 126
>gi|393201690|ref|YP_006463532.1| ribosome recycling factor [Solibacillus silvestris StLB046]
gi|406664567|ref|ZP_11072342.1| Vegetative protein 12B [Bacillus isronensis B3W22]
gi|327441021|dbj|BAK17386.1| ribosome recycling factor [Solibacillus silvestris StLB046]
gi|405387415|gb|EKB46839.1| Vegetative protein 12B [Bacillus isronensis B3W22]
Length = 185
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/117 (51%), Positives = 83/117 (70%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M ++I+ S+R G +N ++LD+I V+YYGSP + +A I+ P++ L+IQPYD
Sbjct: 12 KMTKSINAFSRELASIRAGVANASLLDRITVDYYGSPTPINQMAGISVPEARLLVIQPYD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
KS L IEKAI+ SD+G+TP NDG VIRL +P LT ERRKEL K V K++EE KV +
Sbjct: 72 KSILGEIEKAIMRSDIGITPTNDGNVIRLAVPALTEERRKELVKQVKKESEEAKVAV 128
>gi|226322655|ref|ZP_03798173.1| hypothetical protein COPCOM_00427 [Coprococcus comes ATCC 27758]
gi|225208992|gb|EEG91346.1| ribosome recycling factor [Coprococcus comes ATCC 27758]
Length = 183
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 83/117 (70%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M++TI + T S+R GR+NP +L+K+ VEYYG+P ++ +A I+ P++ + IQP++
Sbjct: 11 KMQKTIHALDTELASIRAGRANPNILNKLTVEYYGTPTPIQQVANISVPEARMIQIQPWE 70
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
K +K IEKAI+ SD+G+ P NDG VIRL P+LT ERRKEL K V K+ E KV +
Sbjct: 71 KKIIKDIEKAILMSDIGINPTNDGTVIRLVFPELTEERRKELVKDVKKKGEASKVAV 127
>gi|27467853|ref|NP_764490.1| ribosome recycling factor [Staphylococcus epidermidis ATCC 12228]
gi|57866733|ref|YP_188408.1| ribosome recycling factor [Staphylococcus epidermidis RP62A]
gi|293366777|ref|ZP_06613453.1| ribosome recycling factor [Staphylococcus epidermidis
M23864:W2(grey)]
gi|417656619|ref|ZP_12306302.1| ribosome recycling factor [Staphylococcus epidermidis VCU028]
gi|417658904|ref|ZP_12308517.1| ribosome recycling factor [Staphylococcus epidermidis VCU045]
gi|417909891|ref|ZP_12553624.1| ribosome recycling factor [Staphylococcus epidermidis VCU037]
gi|417910864|ref|ZP_12554580.1| ribosome recycling factor [Staphylococcus epidermidis VCU105]
gi|418605442|ref|ZP_13168767.1| ribosome recycling factor [Staphylococcus epidermidis VCU041]
gi|418607682|ref|ZP_13170905.1| ribosome recycling factor [Staphylococcus epidermidis VCU057]
gi|418609931|ref|ZP_13173065.1| ribosome recycling factor [Staphylococcus epidermidis VCU065]
gi|418612124|ref|ZP_13175170.1| ribosome recycling factor [Staphylococcus epidermidis VCU117]
gi|418616635|ref|ZP_13179559.1| ribosome recycling factor [Staphylococcus epidermidis VCU120]
gi|418622081|ref|ZP_13184837.1| ribosome recycling factor [Staphylococcus epidermidis VCU123]
gi|418624438|ref|ZP_13187113.1| ribosome recycling factor [Staphylococcus epidermidis VCU125]
gi|418626698|ref|ZP_13189294.1| ribosome recycling factor [Staphylococcus epidermidis VCU126]
gi|418629018|ref|ZP_13191534.1| ribosome recycling factor [Staphylococcus epidermidis VCU127]
gi|418664761|ref|ZP_13226227.1| ribosome recycling factor [Staphylococcus epidermidis VCU081]
gi|419768042|ref|ZP_14294179.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
IS-250]
gi|419770925|ref|ZP_14296987.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
IS-K]
gi|420165206|ref|ZP_14671910.1| ribosome recycling factor [Staphylococcus epidermidis NIHLM088]
gi|420169798|ref|ZP_14676376.1| ribosome recycling factor [Staphylococcus epidermidis NIHLM070]
gi|420172742|ref|ZP_14679240.1| ribosome recycling factor [Staphylococcus epidermidis NIHLM067]
gi|420182928|ref|ZP_14689061.1| ribosome recycling factor [Staphylococcus epidermidis NIHLM049]
gi|420187537|ref|ZP_14693557.1| ribosome recycling factor [Staphylococcus epidermidis NIHLM039]
gi|420194004|ref|ZP_14699833.1| ribosome recycling factor [Staphylococcus epidermidis NIHLM021]
gi|420197149|ref|ZP_14702873.1| ribosome recycling factor [Staphylococcus epidermidis NIHLM020]
gi|420202028|ref|ZP_14707623.1| ribosome recycling factor [Staphylococcus epidermidis NIHLM018]
gi|420206422|ref|ZP_14711932.1| ribosome recycling factor [Staphylococcus epidermidis NIHLM008]
gi|420209463|ref|ZP_14714900.1| ribosome recycling factor [Staphylococcus epidermidis NIHLM003]
gi|420211851|ref|ZP_14717207.1| ribosome recycling factor [Staphylococcus epidermidis NIHLM001]
gi|420214262|ref|ZP_14719541.1| ribosome recycling factor [Staphylococcus epidermidis NIH05005]
gi|420216092|ref|ZP_14721314.1| ribosome recycling factor [Staphylococcus epidermidis NIH05001]
gi|420220040|ref|ZP_14725030.1| ribosome recycling factor [Staphylococcus epidermidis NIH04008]
gi|420221950|ref|ZP_14726875.1| ribosome recycling factor [Staphylococcus epidermidis NIH08001]
gi|420224812|ref|ZP_14729650.1| ribosome recycling factor [Staphylococcus epidermidis NIH06004]
gi|420227049|ref|ZP_14731822.1| ribosome recycling factor [Staphylococcus epidermidis NIH05003]
gi|420229372|ref|ZP_14734078.1| ribosome recycling factor [Staphylococcus epidermidis NIH04003]
gi|420231730|ref|ZP_14736375.1| ribosome recycling factor [Staphylococcus epidermidis NIH051668]
gi|420234418|ref|ZP_14738981.1| ribosome recycling factor [Staphylococcus epidermidis NIH051475]
gi|33301559|sp|Q8CSU0.1|RRF_STAES RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|62900782|sp|Q5HPT2.1|RRF_STAEQ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|27315398|gb|AAO04532.1|AE016747_29 ribosome recycling factor [Staphylococcus epidermidis ATCC 12228]
gi|57637391|gb|AAW54179.1| ribosome recycling factor [Staphylococcus epidermidis RP62A]
gi|291319078|gb|EFE59448.1| ribosome recycling factor [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329736280|gb|EGG72552.1| ribosome recycling factor [Staphylococcus epidermidis VCU028]
gi|329736543|gb|EGG72809.1| ribosome recycling factor [Staphylococcus epidermidis VCU045]
gi|341652500|gb|EGS76288.1| ribosome recycling factor [Staphylococcus epidermidis VCU037]
gi|341655052|gb|EGS78788.1| ribosome recycling factor [Staphylococcus epidermidis VCU105]
gi|374402539|gb|EHQ73564.1| ribosome recycling factor [Staphylococcus epidermidis VCU041]
gi|374403799|gb|EHQ74794.1| ribosome recycling factor [Staphylococcus epidermidis VCU057]
gi|374406267|gb|EHQ77170.1| ribosome recycling factor [Staphylococcus epidermidis VCU065]
gi|374410207|gb|EHQ80968.1| ribosome recycling factor [Staphylococcus epidermidis VCU081]
gi|374820006|gb|EHR84120.1| ribosome recycling factor [Staphylococcus epidermidis VCU117]
gi|374820713|gb|EHR84789.1| ribosome recycling factor [Staphylococcus epidermidis VCU120]
gi|374827456|gb|EHR91318.1| ribosome recycling factor [Staphylococcus epidermidis VCU123]
gi|374827667|gb|EHR91528.1| ribosome recycling factor [Staphylococcus epidermidis VCU125]
gi|374831242|gb|EHR94984.1| ribosome recycling factor [Staphylococcus epidermidis VCU126]
gi|374835012|gb|EHR98643.1| ribosome recycling factor [Staphylococcus epidermidis VCU127]
gi|383360963|gb|EID38346.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
IS-250]
gi|383362474|gb|EID39826.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
IS-K]
gi|394236373|gb|EJD81907.1| ribosome recycling factor [Staphylococcus epidermidis NIHLM088]
gi|394241419|gb|EJD86833.1| ribosome recycling factor [Staphylococcus epidermidis NIHLM067]
gi|394243098|gb|EJD88472.1| ribosome recycling factor [Staphylococcus epidermidis NIHLM070]
gi|394249391|gb|EJD94604.1| ribosome recycling factor [Staphylococcus epidermidis NIHLM049]
gi|394255979|gb|EJE00915.1| ribosome recycling factor [Staphylococcus epidermidis NIHLM039]
gi|394265956|gb|EJE10602.1| ribosome recycling factor [Staphylococcus epidermidis NIHLM020]
gi|394266702|gb|EJE11327.1| ribosome recycling factor [Staphylococcus epidermidis NIHLM021]
gi|394270001|gb|EJE14524.1| ribosome recycling factor [Staphylococcus epidermidis NIHLM018]
gi|394278261|gb|EJE22578.1| ribosome recycling factor [Staphylococcus epidermidis NIHLM008]
gi|394278910|gb|EJE23222.1| ribosome recycling factor [Staphylococcus epidermidis NIHLM003]
gi|394280361|gb|EJE24642.1| ribosome recycling factor [Staphylococcus epidermidis NIHLM001]
gi|394283627|gb|EJE27792.1| ribosome recycling factor [Staphylococcus epidermidis NIH05005]
gi|394287047|gb|EJE31021.1| ribosome recycling factor [Staphylococcus epidermidis NIH04008]
gi|394289981|gb|EJE33851.1| ribosome recycling factor [Staphylococcus epidermidis NIH08001]
gi|394292542|gb|EJE36284.1| ribosome recycling factor [Staphylococcus epidermidis NIH05001]
gi|394294215|gb|EJE37901.1| ribosome recycling factor [Staphylococcus epidermidis NIH06004]
gi|394297550|gb|EJE41147.1| ribosome recycling factor [Staphylococcus epidermidis NIH05003]
gi|394299138|gb|EJE42689.1| ribosome recycling factor [Staphylococcus epidermidis NIH04003]
gi|394302272|gb|EJE45720.1| ribosome recycling factor [Staphylococcus epidermidis NIH051668]
gi|394304221|gb|EJE47628.1| ribosome recycling factor [Staphylococcus epidermidis NIH051475]
Length = 184
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/124 (47%), Positives = 89/124 (71%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
S I KD K+RM+++ID + ++ GR+N +L+ + V+YYG+P ++ +A IN P++
Sbjct: 2 SDIIKDTKSRMQKSIDNLSRELANISAGRANSNLLNGVTVDYYGAPTPVQQLASINVPEA 61
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
L+I PYDKSS+ IEKAI++++LG+ P +DGEVIR+++P LT ERRKEL K V K E
Sbjct: 62 RLLVISPYDKSSVADIEKAIIAANLGVNPTSDGEVIRISVPALTEERRKELVKEVKKIGE 121
Query: 214 EGKV 217
+ KV
Sbjct: 122 DAKV 125
>gi|256827506|ref|YP_003151465.1| ribosome recycling factor [Cryptobacterium curtum DSM 15641]
gi|256583649|gb|ACU94783.1| ribosome recycling factor [Cryptobacterium curtum DSM 15641]
Length = 186
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 56/121 (46%), Positives = 85/121 (70%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+ + RME+ +D + F++VRTGR+N +LD+I V+YYG P + +A I TPD+ L+I
Sbjct: 9 EAEERMEKAVDSLGEAFSNVRTGRANAMVLDRIRVDYYGVPTPINQMAAIKTPDAHMLVI 68
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
+P+DK +L +IE A+ +S+LG+TP NDG +IRL+ P LT ERR+EL K AEE ++
Sbjct: 69 EPWDKGTLGAIEHALNNSNLGLTPTNDGNLIRLSFPTLTEERRRELVKQCKAYAEEARIA 128
Query: 219 M 219
+
Sbjct: 129 V 129
>gi|251810690|ref|ZP_04825163.1| peptide chain release factor RF4 [Staphylococcus epidermidis
BCM-HMP0060]
gi|282876309|ref|ZP_06285176.1| ribosome recycling factor [Staphylococcus epidermidis SK135]
gi|417913340|ref|ZP_12557007.1| ribosome recycling factor [Staphylococcus epidermidis VCU109]
gi|421607240|ref|ZP_16048486.1| ribosome recycling factor [Staphylococcus epidermidis AU12-03]
gi|251805850|gb|EES58507.1| peptide chain release factor RF4 [Staphylococcus epidermidis
BCM-HMP0060]
gi|281295334|gb|EFA87861.1| ribosome recycling factor [Staphylococcus epidermidis SK135]
gi|341655622|gb|EGS79346.1| ribosome recycling factor [Staphylococcus epidermidis VCU109]
gi|406657032|gb|EKC83425.1| ribosome recycling factor [Staphylococcus epidermidis AU12-03]
Length = 184
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/124 (47%), Positives = 89/124 (71%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
S I KD K+RM+++ID + ++ GR+N +L+ + V+YYG+P ++ +A IN P++
Sbjct: 2 SDIIKDTKSRMQKSIDNLSRELANISAGRANSNLLNGVTVDYYGAPTPVQQLASINVPEA 61
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
L+I PYDKSS+ IEKAI++++LG+ P +DGEVIR+++P LT ERRKEL K V K E
Sbjct: 62 RLLVISPYDKSSVADIEKAIIAANLGVNPTSDGEVIRISVPALTEERRKELVKEVKKIGE 121
Query: 214 EGKV 217
+ KV
Sbjct: 122 DAKV 125
>gi|218888003|ref|YP_002437324.1| ribosome recycling factor [Desulfovibrio vulgaris str. 'Miyazaki
F']
gi|226703259|sp|B8DSA1.1|RRF_DESVM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|66766332|dbj|BAD99030.1| ribosome recycling factor [Desulfovibrio vulgaris]
gi|218758957|gb|ACL09856.1| ribosome recycling factor [Desulfovibrio vulgaris str. 'Miyazaki
F']
Length = 186
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 89/126 (70%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
SI D + RME+ + + F +RTGR++ +++D I+V+YYG+P + +A ++ PDS
Sbjct: 4 DSILLDAEERMEKALGSLDREFAKLRTGRASTSLVDNIKVDYYGTPTPISQLASVSVPDS 63
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
+L IQP+D+S+ + +EKAI+ SDLG+ P NDG++IR+++P LT ERRK+L KV K E
Sbjct: 64 RTLTIQPWDRSAFQLVEKAIMKSDLGLNPVNDGKIIRISIPPLTEERRKDLVKVARKYTE 123
Query: 214 EGKVVM 219
E KV +
Sbjct: 124 EAKVAV 129
>gi|227514718|ref|ZP_03944767.1| ribosome recycling factor [Lactobacillus fermentum ATCC 14931]
gi|227086922|gb|EEI22234.1| ribosome recycling factor [Lactobacillus fermentum ATCC 14931]
Length = 186
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/121 (47%), Positives = 83/121 (68%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+ K +M ++ D ++ +R GR+N ++L+ + VEYYG+P L +A I P++ LLI
Sbjct: 9 EAKEKMAKSGDALKRTLADIRAGRANASLLNTVTVEYYGAPTPLNQLASITIPEARQLLI 68
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
PYDK++LK IE+AI S+LG+TP NDGE IRL +PQLT +RRKEL K V + E+ KV
Sbjct: 69 SPYDKTTLKDIERAIYESNLGLTPQNDGETIRLVVPQLTEDRRKELVKDVKAEMEKAKVA 128
Query: 219 M 219
+
Sbjct: 129 V 129
>gi|420144943|ref|ZP_14652422.1| Ribosome-recycling factor (RRF) [Lactobacillus coryniformis subsp.
coryniformis CECT 5711]
gi|398403500|gb|EJN56742.1| Ribosome-recycling factor (RRF) [Lactobacillus coryniformis subsp.
coryniformis CECT 5711]
Length = 186
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 87/121 (71%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+ + +M + + ++ +R GR+N ++L+++ V+YYG+P + +A I P++ L+I
Sbjct: 9 EAQQKMVKAEEALQRELGQIRAGRANASILNRVTVDYYGAPTPVNQLATITIPEARVLMI 68
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
PYDKS+LK IE+AI++SDLG++P NDG VIRL +PQLT +RR+EL+K V KQ EE K+
Sbjct: 69 TPYDKSTLKEIERAILASDLGLSPANDGTVIRLVIPQLTQDRREELAKDVKKQTEEAKIA 128
Query: 219 M 219
+
Sbjct: 129 I 129
>gi|184155193|ref|YP_001843533.1| ribosome recycling factor [Lactobacillus fermentum IFO 3956]
gi|260662307|ref|ZP_05863203.1| ribosome recycling factor [Lactobacillus fermentum 28-3-CHN]
gi|183226537|dbj|BAG27053.1| ribosome recycling factor [Lactobacillus fermentum IFO 3956]
gi|260553690|gb|EEX26582.1| ribosome recycling factor [Lactobacillus fermentum 28-3-CHN]
Length = 186
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/121 (47%), Positives = 83/121 (68%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+ K +M ++ D ++ +R GR+N ++L+ + VEYYG+P L +A I P++ LLI
Sbjct: 9 EAKEKMAKSGDALKRTLADIRAGRANASLLNTVTVEYYGAPTPLNQLASITIPEARQLLI 68
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
PYDK++LK IE+AI S+LG+TP NDGE IRL +PQLT +RRKEL K V + E+ KV
Sbjct: 69 SPYDKTTLKDIERAIYESNLGLTPQNDGETIRLVVPQLTEDRRKELVKDVKAEMEKAKVA 128
Query: 219 M 219
+
Sbjct: 129 V 129
>gi|58337544|ref|YP_194129.1| ribosome recycling factor Rrf [Lactobacillus acidophilus NCFM]
gi|58254861|gb|AAV43098.1| ribosome recycling factor Rrf [Lactobacillus acidophilus NCFM]
Length = 164
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 86/122 (70%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K + M ++I + + SVR G +N A+LD ++VEYYG+P L ++ + P+ LL
Sbjct: 7 KKAQDNMGKSIKVYQKKLASVRAGVANAALLDNVQVEYYGAPTPLTQMSSVTIPEPRVLL 66
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
I PYD++SL IE A+++S+LG+TP NDG+VIRL +PQLTSERR+E++K V K AEE K+
Sbjct: 67 ITPYDQNSLDDIEHALLASNLGLTPANDGKVIRLVIPQLTSERREEIAKEVGKYAEEAKI 126
Query: 218 VM 219
+
Sbjct: 127 AV 128
>gi|113461129|ref|YP_719197.1| ribosome recycling factor [Haemophilus somnus 129PT]
gi|170717712|ref|YP_001784784.1| ribosome recycling factor [Haemophilus somnus 2336]
gi|122945268|sp|Q0I379.1|RRF_HAES1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|189044058|sp|B0UUI5.1|RRF_HAES2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|112823172|gb|ABI25261.1| ribosome recycling factor [Haemophilus somnus 129PT]
gi|168825841|gb|ACA31212.1| ribosome recycling factor [Haemophilus somnus 2336]
Length = 185
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 92/126 (73%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+ I+KD + RME++++ +RT+ +RTGR+ P++LD I+VEYYGSP L+ +A + D+
Sbjct: 3 NEIKKDTQQRMEKSLETLRTHIAKIRTGRAQPSLLDGIQVEYYGSPTPLRQLANVVAEDA 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
+L + +D+S + ++EKAI++SDLG+ P++ G IR+ LP LT ERR++L K+V + E
Sbjct: 63 RTLAVTVFDRSLISAVEKAILTSDLGLNPSSAGTTIRVPLPPLTEERRRDLIKIVKGEGE 122
Query: 214 EGKVVM 219
+GK+ +
Sbjct: 123 QGKIAI 128
>gi|315038582|ref|YP_004032150.1| ribosome recycling factor [Lactobacillus amylovorus GRL 1112]
gi|312276715|gb|ADQ59355.1| ribosome recycling factor [Lactobacillus amylovorus GRL 1112]
Length = 185
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 86/122 (70%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K + M+++I + + S+R G +N A+LD ++VEYYG+P L ++ I P+ LL
Sbjct: 7 KKAQENMDKSIKVYQKKLASIRAGVANAALLDNVQVEYYGAPTPLTQMSSITIPEPRVLL 66
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
I PYD++SL IE A+++S+LG+TP NDG+VIRL +PQLT ERR+E++K V K AEE K+
Sbjct: 67 ITPYDQNSLDDIEHALLASNLGLTPANDGKVIRLVIPQLTGERREEIAKEVGKYAEEAKI 126
Query: 218 VM 219
+
Sbjct: 127 AV 128
>gi|229086377|ref|ZP_04218553.1| Ribosome-recycling factor [Bacillus cereus Rock3-44]
gi|228696893|gb|EEL49702.1| Ribosome-recycling factor [Bacillus cereus Rock3-44]
Length = 185
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 81/117 (69%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+ME+ + SVR GR++ + LDK++V+YYG+P + +A I P++ L+IQPYD
Sbjct: 12 KMEKAVAAYSRELASVRAGRASASALDKVQVDYYGAPTPVVQLANITVPEARLLVIQPYD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
K+S+ IEKAI+ +DLG+ P+NDG VIR+ P LT ERRK+L K V K AEE KV +
Sbjct: 72 KTSIGDIEKAILKADLGLNPSNDGSVIRIAFPALTEERRKDLVKTVKKYAEEAKVAV 128
>gi|300854491|ref|YP_003779475.1| ribosome recycling factor [Clostridium ljungdahlii DSM 13528]
gi|300434606|gb|ADK14373.1| predicted ribosome recycling factor [Clostridium ljungdahlii DSM
13528]
Length = 185
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 85/118 (72%)
Query: 102 ARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPY 161
+M +TID +++ S++ GR++ A+LD+IE EYYGS + + I+ P+ L IQP+
Sbjct: 11 GKMGKTIDALKSELASMKAGRASAALLDRIEAEYYGSMTPINQLGNISIPEPRVLCIQPW 70
Query: 162 DKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
DK++LK+IEKAI+ SDLG+ P+NDGEVIRL +P+LT E RK++ K V K E+ KV +
Sbjct: 71 DKTALKAIEKAILKSDLGINPSNDGEVIRLVIPELTEETRKDIVKNVKKAGEDSKVAV 128
>gi|377564303|ref|ZP_09793625.1| ribosome-recycling factor [Gordonia sputi NBRC 100414]
gi|377528485|dbj|GAB38790.1| ribosome-recycling factor [Gordonia sputi NBRC 100414]
Length = 185
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 85/121 (70%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + +ME+ + + R + S+RTGR+NP+M +KI +EYYG+ + +A I TP++ ++I
Sbjct: 8 DAEEKMEKAVGVAREDMGSIRTGRANPSMFNKIHIEYYGALTPVTQVASITTPEARLVVI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
+PY+ SSL+ IE AI +SDLG+ P NDG +IR+ +PQLT +RRKEL K + E+ KV
Sbjct: 68 KPYEPSSLRDIETAIRNSDLGVNPTNDGNLIRVAIPQLTEDRRKELVKQAKGKGEDAKVA 127
Query: 219 M 219
+
Sbjct: 128 I 128
>gi|238926718|ref|ZP_04658478.1| peptide chain release factor RF4 [Selenomonas flueggei ATCC 43531]
gi|238885250|gb|EEQ48888.1| peptide chain release factor RF4 [Selenomonas flueggei ATCC 43531]
Length = 185
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 82/116 (70%)
Query: 104 MERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDK 163
M + ID++R F+S+R GR+ P +LDK+ V YYG+P S+ +A++ P+ ++I P++K
Sbjct: 13 MNKAIDVLRREFSSLRAGRATPNLLDKVMVPYYGTPTSVNQLAKVTVPEPHMIVITPWEK 72
Query: 164 SSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
+ L IE AI SDLG++PN+DG VIRL +PQ T ERRKEL K V K+ EE KV +
Sbjct: 73 AILHEIEIAISKSDLGLSPNSDGNVIRLAIPQPTQERRKELIKTVGKKTEEAKVAL 128
>gi|320335233|ref|YP_004171944.1| ribosome-recycling factor [Deinococcus maricopensis DSM 21211]
gi|319756522|gb|ADV68279.1| Ribosome-recycling factor [Deinococcus maricopensis DSM 21211]
Length = 180
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/121 (47%), Positives = 85/121 (70%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D +ARM + I+ + + + +RTGR+NP +L KI+VEYYGS + + +A I PD+ +L+I
Sbjct: 7 DTRARMTKAIEALENSMSVLRTGRANPGILKKIQVEYYGSTMPIDQVASITAPDARTLVI 66
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QP+D+ ++ IEKAI SDLG+ PNN G+ I +++P LT ERRK+L K AEEG+V
Sbjct: 67 QPWDRGAINPIEKAIRDSDLGLNPNNKGDSIFISIPALTEERRKDLIKNAKGYAEEGRVA 126
Query: 219 M 219
+
Sbjct: 127 I 127
>gi|374338507|ref|YP_005095222.1| ribosome recycling factor [Streptococcus macedonicus ACA-DC 198]
gi|372284622|emb|CCF02910.1| Ribosome recycling factor [Streptococcus macedonicus ACA-DC 198]
Length = 185
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/124 (50%), Positives = 84/124 (67%), Gaps = 1/124 (0%)
Query: 96 IEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSS 155
IEK K R E++ + F+++R GR+N ++LD+I+VEYYG+ L +A I P++
Sbjct: 6 IEK-AKERFEQSHSSLAREFSAIRAGRANASLLDRIQVEYYGAMTPLNQLASITVPEARV 64
Query: 156 LLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEG 215
LLI P+DKSSLK IE AI +SDLG+ P NDG VIRL +P LT E RKEL+K V K E
Sbjct: 65 LLISPFDKSSLKDIEHAINASDLGINPANDGSVIRLVIPALTEETRKELAKEVKKAGENA 124
Query: 216 KVVM 219
KV +
Sbjct: 125 KVAI 128
>gi|450046322|ref|ZP_21838879.1| ribosome recycling factor [Streptococcus mutans N34]
gi|449199098|gb|EMC00182.1| ribosome recycling factor [Streptococcus mutans N34]
Length = 185
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/126 (48%), Positives = 83/126 (65%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
++I + K R E++ + F S+R G +N ++LD+IEVEYYG P L +A I P++
Sbjct: 3 NAIVEKAKERFEQSHQSLAREFGSIRAGHANASLLDRIEVEYYGVPTPLNQLASITVPEA 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
LL+ P+DKSSLK IE AI +SD+G+ P NDG VIRL +P LT E RKEL+K V K E
Sbjct: 63 RVLLVSPFDKSSLKDIEHAINASDIGINPANDGSVIRLVIPALTEETRKELAKEVKKVGE 122
Query: 214 EGKVVM 219
KV +
Sbjct: 123 NAKVAI 128
>gi|182417573|ref|ZP_02948898.1| ribosome recycling factor [Clostridium butyricum 5521]
gi|237668448|ref|ZP_04528432.1| ribosome recycling factor [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182378586|gb|EDT76114.1| ribosome recycling factor [Clostridium butyricum 5521]
gi|237656796|gb|EEP54352.1| ribosome recycling factor [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 185
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/125 (47%), Positives = 89/125 (71%)
Query: 95 SIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSS 154
I K+ + +M++TI ++ ++ ++++ GR+NP MLD+I+VEYYGS L +A I+ P+
Sbjct: 4 DIIKNAEEKMKKTISVLESDLSTMKAGRANPTMLDRIQVEYYGSMCPLSQVANISAPEPR 63
Query: 155 SLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEE 214
L+I P++K LK IE+AI+ SDLG+ P+NDG VIRL +P+LT+E RK L K V K EE
Sbjct: 64 VLMITPWEKPMLKDIERAILKSDLGLNPSNDGSVIRLVVPELTAETRKTLVKNVKKTGEE 123
Query: 215 GKVVM 219
KV +
Sbjct: 124 AKVAV 128
>gi|386360622|ref|YP_006058867.1| ribosome recycling factor [Thermus thermophilus JL-18]
gi|383509649|gb|AFH39081.1| ribosome recycling factor [Thermus thermophilus JL-18]
Length = 185
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 95/135 (70%), Gaps = 7/135 (5%)
Query: 85 TIEEIEAEKSSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKS 144
T++E+ AE ++ M++++D++ N +RTGR+NPA+L ++VEYYG+ V L
Sbjct: 2 TLKELYAE-------TRSHMQKSLDVLEHNLAGLRTGRANPALLLHLKVEYYGTHVPLNQ 54
Query: 145 IAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKEL 204
IA + PD+ +L++Q +D+++LK+IEKAI SDLG+ P+N G+ + + +P LT ERRK+L
Sbjct: 55 IATVTAPDARTLVVQSWDQNALKAIEKAIRDSDLGLNPSNKGDALYINIPPLTEERRKDL 114
Query: 205 SKVVAKQAEEGKVVM 219
+ V + AEEG+V +
Sbjct: 115 VRAVRQYAEEGRVAI 129
>gi|422936116|ref|ZP_16966694.1| ribosome recycling factor [Fusobacterium nucleatum subsp. animalis
ATCC 51191]
gi|339890884|gb|EGQ79945.1| ribosome recycling factor [Fusobacterium nucleatum subsp. animalis
ATCC 51191]
Length = 190
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 88/122 (72%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K+ + +M +TI+ V+ F ++R GR+N +MLD ++V+ YGS V L I ++ ++ L+
Sbjct: 10 KECEEKMLKTIEAVKEKFTAIRAGRANVSMLDGVKVDNYGSEVPLNQIGTVSASEARLLV 69
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
I P+DKS + IEKA+++++LGMTPNNDG VIRL LP+LT+ERRKE K+ +AE GK+
Sbjct: 70 IDPWDKSLISKIEKALLAANLGMTPNNDGRVIRLVLPELTAERRKEYVKLAKNEAENGKI 129
Query: 218 VM 219
+
Sbjct: 130 AV 131
>gi|94986827|ref|YP_594760.1| ribosome recycling factor [Lawsonia intracellularis PHE/MN1-00]
gi|442555658|ref|YP_007365483.1| ribosome recycling factor [Lawsonia intracellularis N343]
gi|190360249|sp|Q1MRD7.1|RRF_LAWIP RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|94731076|emb|CAJ54439.1| Ribosome recycling factor [Lawsonia intracellularis PHE/MN1-00]
gi|441493105|gb|AGC49799.1| ribosome recycling factor [Lawsonia intracellularis N343]
Length = 188
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 91/131 (69%)
Query: 89 IEAEKSSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQI 148
++ +K I D + RM + I + F +RTGR++ +++D I+V+YYG+P + +A I
Sbjct: 1 MDTDKDKIFLDSQERMVKAITSLEKEFTKLRTGRASTSIVDTIKVDYYGTPTPINQLASI 60
Query: 149 NTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVV 208
PDSSS+ IQP+DK++ IEKAI+ S+LG+TP NDG++IR+TLP LT +RRK+L K+
Sbjct: 61 AIPDSSSITIQPWDKTAFNPIEKAILKSELGLTPINDGKIIRITLPPLTEDRRKDLVKLA 120
Query: 209 AKQAEEGKVVM 219
K E+ K+ +
Sbjct: 121 RKYGEDTKIAI 131
>gi|418635126|ref|ZP_13197512.1| ribosome recycling factor [Staphylococcus lugdunensis VCU139]
gi|374842176|gb|EHS05621.1| ribosome recycling factor [Staphylococcus lugdunensis VCU139]
Length = 184
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/124 (46%), Positives = 89/124 (71%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+ I KD KARM ++I+ + ++ GR+N +L+ + V+YYG+P ++ +A IN P++
Sbjct: 2 ADIIKDTKARMNKSIENLSRELANINAGRANSNLLNGVTVDYYGAPTPVQQLASINVPEA 61
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
L+I PYDK+S+K IE+AI++++LG+ P +DGEVIR+T+P LT ERRKEL K V K E
Sbjct: 62 RLLVISPYDKTSVKDIERAIIAANLGVNPTSDGEVIRITVPALTEERRKELVKDVKKVGE 121
Query: 214 EGKV 217
+ KV
Sbjct: 122 DAKV 125
>gi|94676465|ref|YP_588960.1| ribosome recycling factor [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
gi|190360234|sp|Q1LSV4.1|RRF_BAUCH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|94219615|gb|ABF13774.1| ribosome recycling factor [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
Length = 185
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 56/124 (45%), Positives = 90/124 (72%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
++I +D + RME+ ++ + N + +RTGR+NP +LD I+V+YYGS + L+ +A I D+
Sbjct: 3 NNIRQDAEVRMEKCLETFKNNISKLRTGRANPNLLDNIKVDYYGSIMPLRQLANIIVEDT 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
+L+I +D+S +K +EKAI+ SDLG+TP+ G +IR+ LP LT ERR+ L K+V +AE
Sbjct: 63 RTLVITLFDQSIIKRVEKAIIISDLGLTPDLSGTIIRVQLPSLTEERRRNLIKIVRNEAE 122
Query: 214 EGKV 217
+GK+
Sbjct: 123 QGKI 126
>gi|403714030|ref|ZP_10939995.1| ribosome-recycling factor [Kineosphaera limosa NBRC 100340]
gi|403211849|dbj|GAB94678.1| ribosome-recycling factor [Kineosphaera limosa NBRC 100340]
Length = 185
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 82/119 (68%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+ + +ME+ +++ + +F +RTGR+ P M +K+ V+YYG+P L+ +A TP++ ++LI
Sbjct: 8 EAEEKMEKAVEVAKEDFAGIRTGRATPGMFNKLMVDYYGAPTPLQQLASFQTPEARTVLI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
PYDK S+ +IEKA+ SDLG+ P NDG IR LP LT ERRKE K+ ++ E+ K+
Sbjct: 68 TPYDKQSMSAIEKALRDSDLGVNPGNDGNTIRCVLPALTQERRKEYIKMAHRKGEDAKI 126
>gi|289550950|ref|YP_003471854.1| ribosome recycling factor [Staphylococcus lugdunensis HKU09-01]
gi|315658452|ref|ZP_07911324.1| ribosome recycling factor [Staphylococcus lugdunensis M23590]
gi|385784577|ref|YP_005760750.1| ribosome recycling factor [Staphylococcus lugdunensis N920143]
gi|418414251|ref|ZP_12987466.1| ribosome-recycling factor [Staphylococcus lugdunensis
ACS-027-V-Sch2]
gi|289180482|gb|ADC87727.1| Ribosome recycling factor [Staphylococcus lugdunensis HKU09-01]
gi|315496781|gb|EFU85104.1| ribosome recycling factor [Staphylococcus lugdunensis M23590]
gi|339894833|emb|CCB54129.1| ribosome recycling factor [Staphylococcus lugdunensis N920143]
gi|410876858|gb|EKS24755.1| ribosome-recycling factor [Staphylococcus lugdunensis
ACS-027-V-Sch2]
Length = 184
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/124 (46%), Positives = 89/124 (71%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+ I KD KARM ++I+ + ++ GR+N +L+ + V+YYG+P ++ +A IN P++
Sbjct: 2 ADIIKDTKARMNKSIENLSRELANINAGRANSNLLNGVTVDYYGAPTPVQQLASINVPEA 61
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
L+I PYDK+S+K IE+AI++++LG+ P +DGEVIR+T+P LT ERRKEL K V K E
Sbjct: 62 RLLVISPYDKTSVKDIERAIIAANLGVNPTSDGEVIRITVPALTEERRKELVKDVKKVGE 121
Query: 214 EGKV 217
+ KV
Sbjct: 122 DAKV 125
>gi|440717819|ref|ZP_20898295.1| Ribosome recycling factor [Rhodopirellula baltica SWK14]
gi|39932075|sp|Q7UTH0.2|RRF_RHOBA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|436437057|gb|ELP30734.1| Ribosome recycling factor [Rhodopirellula baltica SWK14]
Length = 186
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 84/119 (70%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + RM++ + +++ N + +RTGR+NP ++D I+VE YGS LK +A I TP+ +LI
Sbjct: 9 DAEERMDKAVSVLQNNLSGIRTGRANPGLVDSIKVEVYGSLTPLKQLASIGTPEPQQILI 68
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
+PYD +++K IEKAIV+ DLG+ P NDG VIRL +P L+ E RK++ + + AEE KV
Sbjct: 69 RPYDATTIKDIEKAIVAGDLGLNPQNDGRVIRLNVPPLSGEVRKKMVSRIKELAEEAKV 127
>gi|225018404|ref|ZP_03707596.1| hypothetical protein CLOSTMETH_02351 [Clostridium methylpentosum
DSM 5476]
gi|224948822|gb|EEG30031.1| hypothetical protein CLOSTMETH_02351 [Clostridium methylpentosum
DSM 5476]
Length = 184
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 86/119 (72%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
+++M +T++ + + ++R GR+NP +LDKI V+YYG+P + +A ++ ++ L+I P
Sbjct: 9 ESKMHKTVERLEHEYTTIRAGRANPNVLDKILVDYYGTPTQINQMAAVSVSEARILVISP 68
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
+D +SLK+IEKAI +SDLG+ P NDG+VIR+ PQLT ERRKE+ K V K E+ KV +
Sbjct: 69 WDATSLKAIEKAIQASDLGINPTNDGKVIRIAFPQLTEERRKEIVKEVHKMREDAKVAV 127
>gi|260913177|ref|ZP_05919659.1| ribosome recycling factor [Pasteurella dagmatis ATCC 43325]
gi|260632764|gb|EEX50933.1| ribosome recycling factor [Pasteurella dagmatis ATCC 43325]
Length = 185
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 92/126 (73%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+ I+KD +ARME++++ + + VRTGR+ P++LD I+VEYYGSP L+ +A + D+
Sbjct: 3 NEIKKDTQARMEKSLETFKNHIAKVRTGRAQPSLLDGIQVEYYGSPTPLRQLANVVAEDA 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
+L + +D+S + ++EKAI++SDLG+ P++ G IR+ LP LT ERR++L K+V +AE
Sbjct: 63 RTLAVTVFDRSLISAVEKAILTSDLGLNPSSAGTTIRVPLPPLTEERRRDLIKIVKGEAE 122
Query: 214 EGKVVM 219
+GK+ +
Sbjct: 123 QGKIAV 128
>gi|374298555|ref|YP_005050194.1| Ribosome-recycling factor [Desulfovibrio africanus str. Walvis Bay]
gi|332551491|gb|EGJ48535.1| Ribosome-recycling factor [Desulfovibrio africanus str. Walvis Bay]
Length = 184
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 88/122 (72%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K+++ RM++ ++ ++ F +RTGR++ +L+ I ++YYGS + +A + TPDS ++
Sbjct: 6 KELETRMQKVVENLKREFGRLRTGRASTTLLEGINIDYYGSSTPISQVASVATPDSRTIT 65
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
IQP+D+ S IEKAI++SDLG+ P NDG++IR++LP LT ERRK+L K+ K EEGKV
Sbjct: 66 IQPWDRGSFGPIEKAIMTSDLGLNPVNDGKIIRISLPPLTEERRKDLVKLGKKYTEEGKV 125
Query: 218 VM 219
+
Sbjct: 126 AV 127
>gi|32472787|ref|NP_865781.1| ribosome recycling factor [Rhodopirellula baltica SH 1]
gi|32444024|emb|CAD73466.1| Ribosome recycling factor [Rhodopirellula baltica SH 1]
Length = 200
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 84/119 (70%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + RM++ + +++ N + +RTGR+NP ++D I+VE YGS LK +A I TP+ +LI
Sbjct: 23 DAEERMDKAVSVLQNNLSGIRTGRANPGLVDSIKVEVYGSLTPLKQLASIGTPEPQQILI 82
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
+PYD +++K IEKAIV+ DLG+ P NDG VIRL +P L+ E RK++ + + AEE KV
Sbjct: 83 RPYDATTIKDIEKAIVAGDLGLNPQNDGRVIRLNVPPLSGEVRKKMVSRIKELAEEAKV 141
>gi|417302140|ref|ZP_12089253.1| ribosome recycling factor [Rhodopirellula baltica WH47]
gi|421614324|ref|ZP_16055385.1| Ribosome recycling factor [Rhodopirellula baltica SH28]
gi|327541582|gb|EGF28113.1| ribosome recycling factor [Rhodopirellula baltica WH47]
gi|408494844|gb|EKJ99441.1| Ribosome recycling factor [Rhodopirellula baltica SH28]
Length = 179
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 84/119 (70%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + RM++ + +++ N + +RTGR+NP ++D I+VE YGS LK +A I TP+ +LI
Sbjct: 2 DAEERMDKAVSVLQNNLSGIRTGRANPGLVDSIKVEVYGSLTPLKQLASIGTPEPQQILI 61
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
+PYD +++K IEKAIV+ DLG+ P NDG VIRL +P L+ E RK++ + + AEE KV
Sbjct: 62 RPYDATTIKDIEKAIVAGDLGLNPQNDGRVIRLNVPPLSGEVRKKMVSRIKELAEEAKV 120
>gi|257792211|ref|YP_003182817.1| ribosome recycling factor [Eggerthella lenta DSM 2243]
gi|317490131|ref|ZP_07948620.1| ribosome recycling factor [Eggerthella sp. 1_3_56FAA]
gi|325833584|ref|ZP_08166033.1| ribosome recycling factor [Eggerthella sp. HGA1]
gi|257476108|gb|ACV56428.1| ribosome recycling factor [Eggerthella lenta DSM 2243]
gi|316910836|gb|EFV32456.1| ribosome recycling factor [Eggerthella sp. 1_3_56FAA]
gi|325485508|gb|EGC87977.1| ribosome recycling factor [Eggerthella sp. HGA1]
Length = 185
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/117 (50%), Positives = 80/117 (68%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
RME+ + + F SVRTGR+N +LD+I V+YYG P + +A + TPD+ L+I+P+D
Sbjct: 12 RMEKALGSLGDAFASVRTGRANAMVLDRIRVDYYGVPTPVNQMAGVKTPDAHMLVIEPWD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
K L +IE AI+ SDLG+TP+NDG VIRL P LT ERR+EL K AEE +V +
Sbjct: 72 KGVLGAIEHAILQSDLGVTPSNDGSVIRLPFPALTEERRRELVKQCKGYAEEARVAV 128
>gi|187935220|ref|YP_001885459.1| ribosome recycling factor [Clostridium botulinum B str. Eklund 17B]
gi|238691618|sp|B2TJ43.1|RRF_CLOBB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|187723373|gb|ACD24594.1| ribosome recycling factor [Clostridium botulinum B str. Eklund 17B]
Length = 185
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 89/125 (71%)
Query: 95 SIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSS 154
I K+ + +M++T+ ++++ +++ GR+NP+MLDKI+++YYGS L A I++P+
Sbjct: 4 DIIKNAEEKMQKTVTVLKSELGTMKAGRANPSMLDKIQIDYYGSMCPLSQAANISSPEPR 63
Query: 155 SLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEE 214
L+I P++K LK IEKAI+ SDLG+ P+NDG +IRL +P+LT E RK+L K V K EE
Sbjct: 64 VLMITPWEKQLLKEIEKAILKSDLGLNPSNDGSIIRLVIPELTEETRKDLVKKVKKTGEE 123
Query: 215 GKVVM 219
KV +
Sbjct: 124 SKVAI 128
>gi|347531718|ref|YP_004838481.1| ribosome recycling factor [Roseburia hominis A2-183]
gi|345501866|gb|AEN96549.1| ribosome recycling factor [Roseburia hominis A2-183]
Length = 183
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 84/117 (71%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M +T++ + F +R GR+NP +LDK+ V+YYG+P +++ +A ++ P+ + IQP++
Sbjct: 11 KMGKTMNNLAEEFGGIRAGRANPHVLDKLRVDYYGTPTAIQQVANVSVPEPRMIQIQPWE 70
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
S +K IEKAI++SDLG+ P NDG+ +RL P+LT ERRKEL+K V K+ E KV +
Sbjct: 71 ASMVKEIEKAILTSDLGINPTNDGKTVRLLFPELTEERRKELAKDVKKKGENAKVAI 127
>gi|289423559|ref|ZP_06425360.1| ribosome recycling factor [Peptostreptococcus anaerobius 653-L]
gi|429728253|ref|ZP_19262985.1| ribosome recycling factor [Peptostreptococcus anaerobius VPI 4330]
gi|289156061|gb|EFD04725.1| ribosome recycling factor [Peptostreptococcus anaerobius 653-L]
gi|429150244|gb|EKX93183.1| ribosome recycling factor [Peptostreptococcus anaerobius VPI 4330]
Length = 185
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 85/119 (71%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+++ +ME+TI+ ++ F ++R GR+N +MLDK+ V+YYG+P + +A + + L I
Sbjct: 8 ELEEQMEKTIEALKFEFGTIRAGRANASMLDKVRVDYYGTPTPVNQMAAVAVSEGRVLTI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
P+DKS + +IEKAI SD+G+ P+NDG VIRLT+PQLT ERRKEL+K K +E KV
Sbjct: 68 TPWDKSVIHAIEKAISDSDIGIAPSNDGSVIRLTVPQLTEERRKELAKKANKASESFKV 126
>gi|449137189|ref|ZP_21772520.1| ribosome recycling factor [Rhodopirellula europaea 6C]
gi|448884266|gb|EMB14768.1| ribosome recycling factor [Rhodopirellula europaea 6C]
Length = 179
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 84/119 (70%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + RM++ + +++ N + +RTGR+NP ++D I+VE YGS LK +A I TP+ +LI
Sbjct: 2 DAEERMDKAVSVLQNNLSGIRTGRANPGLVDSIKVEVYGSLTPLKQLASIGTPEPQQILI 61
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
+PYD +++K IEKAIV+ DLG+ P NDG VIRL +P L+ E RK++ + + AEE KV
Sbjct: 62 RPYDATTIKDIEKAIVAGDLGLNPQNDGRVIRLNVPPLSGEVRKKMVSRIKELAEEAKV 120
>gi|342217948|ref|ZP_08710583.1| ribosome recycling factor [Megasphaera sp. UPII 135-E]
gi|341592587|gb|EGS35472.1| ribosome recycling factor [Megasphaera sp. UPII 135-E]
Length = 186
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 91/117 (77%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M++TI+ ++ +F+SVRTGR++ ++LD++ V+YYG+ +K +A ++ P+ + L I P++
Sbjct: 13 KMDKTIEALKRDFSSVRTGRASTSLLDRVMVDYYGAATPIKQVANVSAPEPTLLTIVPWE 72
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
++ L IE+AI+ SDLG+ PNNDG +IRL +P+ T ERRKEL+K V+K AEE KVV+
Sbjct: 73 RNILGDIERAILKSDLGLNPNNDGTMIRLEIPKPTEERRKELTKKVSKYAEESKVVI 129
>gi|30263828|ref|NP_846205.1| ribosome recycling factor [Bacillus anthracis str. Ames]
gi|47529252|ref|YP_020601.1| ribosome recycling factor [Bacillus anthracis str. 'Ames Ancestor']
gi|49186674|ref|YP_029926.1| ribosome recycling factor [Bacillus anthracis str. Sterne]
gi|65321151|ref|ZP_00394110.1| COG0233: Ribosome recycling factor [Bacillus anthracis str. A2012]
gi|170706904|ref|ZP_02897362.1| ribosome recycling factor [Bacillus anthracis str. A0389]
gi|229604313|ref|YP_002868062.1| ribosome recycling factor [Bacillus anthracis str. A0248]
gi|33301536|sp|Q81WL1.1|RRF_BACAN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|254809489|sp|C3P5M6.1|RRF_BACAA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|30258472|gb|AAP27691.1| ribosome recycling factor [Bacillus anthracis str. Ames]
gi|47504400|gb|AAT33076.1| ribosome recycling factor [Bacillus anthracis str. 'Ames Ancestor']
gi|49180601|gb|AAT55977.1| ribosome recycling factor [Bacillus anthracis str. Sterne]
gi|170128322|gb|EDS97191.1| ribosome recycling factor [Bacillus anthracis str. A0389]
gi|229268721|gb|ACQ50358.1| ribosome recycling factor [Bacillus anthracis str. A0248]
Length = 185
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 83/117 (70%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+ME+ + +VR GR++ ++LDK++V+YYG+P + +A I P++ L+IQPYD
Sbjct: 12 KMEKAVAAYSRELATVRAGRASASVLDKVQVDYYGAPTPVVQLANITVPEARLLVIQPYD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
K+S+ IEKAI+ +DLG+ P+NDG VIR+ P LT ERR++L KVV K AEE KV +
Sbjct: 72 KTSIGDIEKAILKADLGLNPSNDGTVIRIAFPALTEERRRDLVKVVKKYAEEAKVAV 128
>gi|340751246|ref|ZP_08688068.1| ribosome-recycling factor [Fusobacterium mortiferum ATCC 9817]
gi|229421765|gb|EEO36812.1| ribosome-recycling factor [Fusobacterium mortiferum ATCC 9817]
Length = 188
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 86/119 (72%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K +M + ++ + F S+R GR+N +MLD I+VE YGS + L + ++ P++ L+I P
Sbjct: 11 KEKMGKAVEATKHKFTSIRAGRANVSMLDGIKVEQYGSEMPLNQVGSVSAPEARLLVIDP 70
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
+DKS + IEKAI++++LG+TPNNDG+VIRL +P+LT++RRKE K+ +AE GKV +
Sbjct: 71 WDKSLIGKIEKAIIAANLGLTPNNDGKVIRLIMPELTADRRKEYVKMAKSEAENGKVAV 129
>gi|400977594|pdb|4GFQ|A Chain A, 2.65 Angstrom Resolution Crystal Structure Of Ribosome
Recycling Factor (Frr) From Bacillus Anthracis
Length = 209
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 83/117 (70%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+ME+ + +VR GR++ ++LDK++V+YYG+P + +A I P++ L+IQPYD
Sbjct: 36 KMEKAVAAYSRELATVRAGRASASVLDKVQVDYYGAPTPVVQLANITVPEARLLVIQPYD 95
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
K+S+ IEKAI+ +DLG+ P+NDG VIR+ P LT ERR++L KVV K AEE KV +
Sbjct: 96 KTSIGDIEKAILKADLGLNPSNDGTVIRIAFPALTEERRRDLVKVVKKYAEEAKVAV 152
>gi|227904185|ref|ZP_04021990.1| ribosome recycling factor [Lactobacillus acidophilus ATCC 4796]
gi|227868204|gb|EEJ75625.1| ribosome recycling factor [Lactobacillus acidophilus ATCC 4796]
Length = 185
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 86/122 (70%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K + M ++I + + SVR G +N A+LD ++VEYYG+P L ++ + P+ LL
Sbjct: 7 KKAQDNMGKSIKVYQKKLASVRAGVANAALLDNVQVEYYGAPTPLTQMSSVTIPEPRVLL 66
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
I PYD++SL IE A+++S+LG+TP NDG+VIRL +PQLTSERR+E++K V K AEE K+
Sbjct: 67 ITPYDQNSLDDIEHALLASNLGLTPANDGKVIRLVIPQLTSERREEIAKEVGKYAEEAKI 126
Query: 218 VM 219
+
Sbjct: 127 AV 128
>gi|429735383|ref|ZP_19269350.1| ribosome recycling factor [Selenomonas sp. oral taxon 138 str.
F0429]
gi|429159078|gb|EKY01599.1| ribosome recycling factor [Selenomonas sp. oral taxon 138 str.
F0429]
Length = 185
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/119 (48%), Positives = 83/119 (69%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
+A M + I+ +R F+S+R GR+ P +LDK+ V YYG+P S+ +A++ P+ ++I P
Sbjct: 10 EASMNKAIEALRREFSSLRAGRATPNLLDKVMVPYYGTPTSVNQLAKVTVPEPHMIVITP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
++KS L IE AI SDLG++PN+DG VIRL +PQ T ERRKEL K V K+ EE KV +
Sbjct: 70 WEKSILHEIEIAISKSDLGLSPNSDGTVIRLAIPQPTQERRKELIKTVGKKTEEAKVAL 128
>gi|49478397|ref|YP_037885.1| ribosome recycling factor [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|52141664|ref|YP_085165.1| ribosome recycling factor [Bacillus cereus E33L]
gi|118479046|ref|YP_896197.1| ribosome recycling factor [Bacillus thuringiensis str. Al Hakam]
gi|165872626|ref|ZP_02217257.1| ribosome recycling factor [Bacillus anthracis str. A0488]
gi|167635820|ref|ZP_02394129.1| ribosome recycling factor [Bacillus anthracis str. A0442]
gi|167639854|ref|ZP_02398123.1| ribosome recycling factor [Bacillus anthracis str. A0193]
gi|170687902|ref|ZP_02879116.1| ribosome recycling factor [Bacillus anthracis str. A0465]
gi|177652096|ref|ZP_02934642.1| ribosome recycling factor [Bacillus anthracis str. A0174]
gi|190568475|ref|ZP_03021382.1| ribosome recycling factor [Bacillus anthracis str. Tsiankovskii-I]
gi|196036913|ref|ZP_03104297.1| ribosome recycling factor [Bacillus cereus W]
gi|196042138|ref|ZP_03109421.1| ribosome recycling factor [Bacillus cereus NVH0597-99]
gi|196044581|ref|ZP_03111816.1| ribosome recycling factor [Bacillus cereus 03BB108]
gi|218904952|ref|YP_002452786.1| ribosome recycling factor [Bacillus cereus AH820]
gi|225865805|ref|YP_002751183.1| ribosome recycling factor [Bacillus cereus 03BB102]
gi|227813268|ref|YP_002813277.1| ribosome recycling factor [Bacillus anthracis str. CDC 684]
gi|228916461|ref|ZP_04080027.1| Ribosome-recycling factor [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228928872|ref|ZP_04091904.1| Ribosome-recycling factor [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228935138|ref|ZP_04097965.1| Ribosome-recycling factor [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228947543|ref|ZP_04109833.1| Ribosome-recycling factor [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|229123337|ref|ZP_04252541.1| Ribosome-recycling factor [Bacillus cereus 95/8201]
gi|229162760|ref|ZP_04290717.1| Ribosome-recycling factor [Bacillus cereus R309803]
gi|229186063|ref|ZP_04313233.1| Ribosome-recycling factor [Bacillus cereus BGSC 6E1]
gi|254683469|ref|ZP_05147329.1| ribosome recycling factor [Bacillus anthracis str. CNEVA-9066]
gi|254721990|ref|ZP_05183779.1| ribosome recycling factor [Bacillus anthracis str. A1055]
gi|254735862|ref|ZP_05193568.1| ribosome recycling factor [Bacillus anthracis str. Western North
America USA6153]
gi|254739612|ref|ZP_05197306.1| ribosome recycling factor [Bacillus anthracis str. Kruger B]
gi|254756015|ref|ZP_05208046.1| ribosome recycling factor [Bacillus anthracis str. Vollum]
gi|254759324|ref|ZP_05211349.1| ribosome recycling factor [Bacillus anthracis str. Australia 94]
gi|301055314|ref|YP_003793525.1| ribosome releasing factor [Bacillus cereus biovar anthracis str.
CI]
gi|376267720|ref|YP_005120432.1| Ribosome recycling factor [Bacillus cereus F837/76]
gi|421507364|ref|ZP_15954284.1| ribosome recycling factor [Bacillus anthracis str. UR-1]
gi|421639579|ref|ZP_16080170.1| ribosome recycling factor [Bacillus anthracis str. BF1]
gi|423550427|ref|ZP_17526754.1| ribosome-recycling factor [Bacillus cereus ISP3191]
gi|60390240|sp|Q636K2.1|RRF_BACCZ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|60390255|sp|Q6HEZ1.1|RRF_BACHK RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|166230411|sp|A0RHJ7.1|RRF_BACAH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|226703251|sp|B7JJA2.1|RRF_BACC0 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|254809490|sp|C3L7A3.1|RRF_BACAC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|254809491|sp|C1EP48.1|RRF_BACC3 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|49329953|gb|AAT60599.1| ribosome recycling factor [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|51975133|gb|AAU16683.1| ribosome recycling factor [Bacillus cereus E33L]
gi|118418271|gb|ABK86690.1| ribosome recycling factor [Bacillus thuringiensis str. Al Hakam]
gi|164711658|gb|EDR17204.1| ribosome recycling factor [Bacillus anthracis str. A0488]
gi|167512255|gb|EDR87632.1| ribosome recycling factor [Bacillus anthracis str. A0193]
gi|167528777|gb|EDR91535.1| ribosome recycling factor [Bacillus anthracis str. A0442]
gi|170668218|gb|EDT18967.1| ribosome recycling factor [Bacillus anthracis str. A0465]
gi|172082465|gb|EDT67530.1| ribosome recycling factor [Bacillus anthracis str. A0174]
gi|190560479|gb|EDV14457.1| ribosome recycling factor [Bacillus anthracis str. Tsiankovskii-I]
gi|195990468|gb|EDX54452.1| ribosome recycling factor [Bacillus cereus W]
gi|196024616|gb|EDX63288.1| ribosome recycling factor [Bacillus cereus 03BB108]
gi|196026990|gb|EDX65614.1| ribosome recycling factor [Bacillus cereus NVH0597-99]
gi|218535243|gb|ACK87641.1| ribosome recycling factor [Bacillus cereus AH820]
gi|225788805|gb|ACO29022.1| ribosome recycling factor [Bacillus cereus 03BB102]
gi|227004475|gb|ACP14218.1| ribosome recycling factor [Bacillus anthracis str. CDC 684]
gi|228597482|gb|EEK55132.1| Ribosome-recycling factor [Bacillus cereus BGSC 6E1]
gi|228620642|gb|EEK77511.1| Ribosome-recycling factor [Bacillus cereus R309803]
gi|228660113|gb|EEL15749.1| Ribosome-recycling factor [Bacillus cereus 95/8201]
gi|228812063|gb|EEM58394.1| Ribosome-recycling factor [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228824503|gb|EEM70308.1| Ribosome-recycling factor [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228830679|gb|EEM76284.1| Ribosome-recycling factor [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228843040|gb|EEM88122.1| Ribosome-recycling factor [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|300377483|gb|ADK06387.1| ribosome releasing factor [Bacillus cereus biovar anthracis str.
CI]
gi|364513520|gb|AEW56919.1| Ribosome recycling factor [Bacillus cereus F837/76]
gi|401190043|gb|EJQ97093.1| ribosome-recycling factor [Bacillus cereus ISP3191]
gi|401822498|gb|EJT21648.1| ribosome recycling factor [Bacillus anthracis str. UR-1]
gi|403393244|gb|EJY90489.1| ribosome recycling factor [Bacillus anthracis str. BF1]
Length = 185
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 83/117 (70%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+ME+ + +VR GR++ ++LDK++V+YYG+P + +A I P++ L+IQPYD
Sbjct: 12 KMEKAVAAYSRELATVRAGRASASVLDKVQVDYYGAPTPVVQLANITVPEARLLVIQPYD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
K+S+ IEKAI+ +DLG+ P+NDG VIR+ P LT ERR++L KVV K AEE KV +
Sbjct: 72 KTSIGDIEKAILKADLGLNPSNDGTVIRIAFPALTEERRRDLVKVVKKYAEEAKVAV 128
>gi|302339357|ref|YP_003804563.1| ribosome recycling factor [Spirochaeta smaragdinae DSM 11293]
gi|301636542|gb|ADK81969.1| ribosome recycling factor [Spirochaeta smaragdinae DSM 11293]
Length = 184
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 86/122 (70%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
KD ++RM+++I + +FN +RTGR++ A+ DKI+V+YYG L A I+ P++ ++
Sbjct: 6 KDAESRMKKSISALGDDFNGLRTGRASAALFDKIKVDYYGQSTPLSQAATISVPEARLVV 65
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
IQP+DK L IE+AI S+L + PNNDG+VIR+ +P LT ERRKEL KV QAE+ KV
Sbjct: 66 IQPWDKGLLGEIERAIQKSELSVNPNNDGKVIRINIPPLTEERRKELVKVAKNQAEQCKV 125
Query: 218 VM 219
+
Sbjct: 126 AI 127
>gi|172057857|ref|YP_001814317.1| ribosome recycling factor [Exiguobacterium sibiricum 255-15]
gi|229564225|sp|B1YI73.1|RRF_EXIS2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|171990378|gb|ACB61300.1| ribosome recycling factor [Exiguobacterium sibiricum 255-15]
Length = 185
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/126 (46%), Positives = 87/126 (69%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+I K + RME+ ++ ++R GR+N ++LD ++V+YYGSP L +A +NTP++
Sbjct: 3 QAIMKQAEERMEKAHLSLKKELATLRAGRANVSILDPVQVDYYGSPTPLNQVANVNTPEA 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
+LI P+DKS + IEKAI +DLG+ P++DG VIRL +P LT +RRKEL K+V K E
Sbjct: 63 RLILITPWDKSMVTEIEKAIQRADLGLAPSSDGTVIRLAIPPLTEDRRKELVKLVKKYTE 122
Query: 214 EGKVVM 219
EGKV +
Sbjct: 123 EGKVAL 128
>gi|359300205|ref|ZP_09186044.1| ribosome recycling factor [Haemophilus [parainfluenzae] CCUG 13788]
gi|402305352|ref|ZP_10824411.1| ribosome recycling factor [Haemophilus sputorum HK 2154]
gi|400376465|gb|EJP29352.1| ribosome recycling factor [Haemophilus sputorum HK 2154]
Length = 185
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 94/126 (74%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+ I++D +ARME++++ ++++ + +RTGR+ P++LD ++VEYYGSP L+ +A + D+
Sbjct: 3 NEIKQDAQARMEKSLEALKSHISKIRTGRAQPSLLDGLQVEYYGSPTPLRQVANVVAEDA 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
+L + +DKS + ++EKAI++SDLG+ P++ G IR+ LP LT ERR++L K+V + E
Sbjct: 63 RTLAVNVFDKSLIGAVEKAILTSDLGLNPSSAGTTIRVPLPPLTEERRRDLIKIVKSEGE 122
Query: 214 EGKVVM 219
+GK+ +
Sbjct: 123 QGKIAV 128
>gi|407977560|ref|ZP_11158397.1| ribosome recycling factor [Bacillus sp. HYC-10]
gi|407415813|gb|EKF37394.1| ribosome recycling factor [Bacillus sp. HYC-10]
Length = 185
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/119 (49%), Positives = 81/119 (68%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K +ME+ + +VR GR+N ++LDK+ V+YYG+ L IA I P++ L+I P
Sbjct: 10 KEKMEKAVQAYGRELATVRAGRANASLLDKVTVDYYGAQTPLNQIASITVPEARMLIITP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
YDK+++ IEKAI SDLG+TP +DG VIR+ +P LT ERRKEL KVV K +EE KV +
Sbjct: 70 YDKTAIGDIEKAIQKSDLGITPTSDGNVIRIAIPALTEERRKELVKVVRKYSEEAKVAV 128
>gi|389573225|ref|ZP_10163300.1| ribosome recycling factor [Bacillus sp. M 2-6]
gi|388426922|gb|EIL84732.1| ribosome recycling factor [Bacillus sp. M 2-6]
Length = 185
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/119 (49%), Positives = 81/119 (68%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K +ME+ + +VR GR+N ++LDK+ V+YYG+ L IA I P++ L+I P
Sbjct: 10 KEKMEKAVQAYGRELATVRAGRANASLLDKVTVDYYGAQTPLNQIASITVPEARMLIITP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
YDK+++ IEKAI SDLG+TP +DG VIR+ +P LT ERRKEL KVV K +EE KV +
Sbjct: 70 YDKTAIGDIEKAIQKSDLGITPTSDGNVIRIAIPALTEERRKELVKVVRKYSEEAKVAV 128
>gi|229092864|ref|ZP_04223998.1| Ribosome-recycling factor [Bacillus cereus Rock3-42]
gi|228690486|gb|EEL44269.1| Ribosome-recycling factor [Bacillus cereus Rock3-42]
Length = 185
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 83/117 (70%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+ME+ + +VR GR++ ++LDK++V+YYG+P + +A I P++ L+IQPYD
Sbjct: 12 KMEKAVAAYSRELATVRAGRASASVLDKVQVDYYGAPTPVVQLANITVPEARLLVIQPYD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
K+S+ IEKAI+ +DLG+ P+NDG VIR+ P LT ERR++L KVV K AEE KV +
Sbjct: 72 KTSIGDIEKAILKADLGLNPSNDGTVIRIAFPALTEERRRDLVKVVKKYAEEAKVAV 128
>gi|363420027|ref|ZP_09308123.1| ribosome recycling factor [Rhodococcus pyridinivorans AK37]
gi|359736319|gb|EHK85265.1| ribosome recycling factor [Rhodococcus pyridinivorans AK37]
Length = 185
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 84/121 (69%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+ + +ME+ + + R + +RTGR+NP M ++I V+YYG+P + IA IN P++ +++
Sbjct: 8 EAEEKMEKAVTVARDDLGGIRTGRANPGMFNRIVVDYYGAPTPITQIASINVPEARMVIV 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
+PY+ S L +IE AI +SDLG+ P NDG +IR+++PQLT ERR+EL K + E+ KV
Sbjct: 68 KPYEASQLNAIETAIRNSDLGVNPTNDGNIIRISVPQLTEERRRELVKQAKAKGEDAKVA 127
Query: 219 M 219
+
Sbjct: 128 V 128
>gi|357057433|ref|ZP_09118293.1| ribosome-recycling factor [Selenomonas infelix ATCC 43532]
gi|355375337|gb|EHG22624.1| ribosome-recycling factor [Selenomonas infelix ATCC 43532]
Length = 185
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/119 (48%), Positives = 83/119 (69%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
+A M + I+ +R F+S+R GR+ P +LDK+ V YYG+P S+ +A++ P+ ++I P
Sbjct: 10 EASMNKAIEALRREFSSLRAGRATPNLLDKVMVPYYGTPTSVNQLAKVTVPEPHMIVITP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
++KS L IE AI SDLG++PN+DG VIRL +PQ T ERRKEL K V K+ EE KV +
Sbjct: 70 WEKSILHEIEIAISKSDLGLSPNSDGTVIRLAIPQPTQERRKELIKTVGKKTEEAKVAL 128
>gi|226356272|ref|YP_002786012.1| ribosome recycling factor [Deinococcus deserti VCD115]
gi|259494537|sp|C1CVP1.1|RRF_DEIDV RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|226318262|gb|ACO46258.1| putative Ribosome recycling factor (Ribosome-releasing factor)
(RRF) [Deinococcus deserti VCD115]
Length = 183
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 88/129 (68%)
Query: 91 AEKSSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINT 150
A+ SI+ D + RM + I+ + +N + +RTGR+NP +L K+ V+YYGS + + +A I T
Sbjct: 2 ADMKSIQADARERMGKAIEALESNLSVLRTGRANPGILKKVIVDYYGSTMPIDQVASITT 61
Query: 151 PDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAK 210
PD+ +L+I P+D+ +L IEKAI SDLG+ PNN G+ I ++LP LT ERRK+L K
Sbjct: 62 PDARTLVITPWDRGALGPIEKAIRDSDLGLNPNNKGDTIFISLPMLTEERRKDLVKNAKN 121
Query: 211 QAEEGKVVM 219
AE+ ++ +
Sbjct: 122 YAEDARIAV 130
>gi|406936245|gb|EKD70019.1| hypothetical protein ACD_46C00671G0007 [uncultured bacterium]
Length = 184
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 86/122 (70%)
Query: 96 IEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSS 155
I KD +ARM ++ID +T +RTGR+NP++LD + V+YYGS + + +A I T D+ +
Sbjct: 4 IIKDAEARMRKSIDAFKTEITKLRTGRANPSILDHVRVDYYGSEMPINQVANITTTDART 63
Query: 156 LLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEG 215
L I P++KS +K IEKAI++SDLG+ P G+VIR+ +P L ERR+EL KV+ +AE
Sbjct: 64 LTITPWEKSMVKVIEKAILNSDLGLNPATTGDVIRVPMPALNEERRRELIKVLRNEAEAA 123
Query: 216 KV 217
+V
Sbjct: 124 RV 125
>gi|326382902|ref|ZP_08204592.1| ribosome recycling factor [Gordonia neofelifaecis NRRL B-59395]
gi|326198492|gb|EGD55676.1| ribosome recycling factor [Gordonia neofelifaecis NRRL B-59395]
Length = 185
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 85/121 (70%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + +ME+ + +R + S+RTGR+NPAM +K+ +EYYG+ + +A INTP+ ++I
Sbjct: 8 DAEEKMEKAVAHLRDDMASIRTGRANPAMFNKVVIEYYGAMTPITQVAGINTPEPRLVVI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
+PY++S++ IE AI +SDLG+ P NDG VIR+ +PQLT ERRK+L K + E+ KV
Sbjct: 68 KPYEQSTMNDIETAIRNSDLGVNPTNDGTVIRVAVPQLTEERRKQLGKQARGKGEDAKVA 127
Query: 219 M 219
+
Sbjct: 128 I 128
>gi|441515301|ref|ZP_20997105.1| ribosome-recycling factor [Gordonia amicalis NBRC 100051]
gi|441449863|dbj|GAC55066.1| ribosome-recycling factor [Gordonia amicalis NBRC 100051]
Length = 185
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 86/121 (71%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + +ME+ +++ + + S+RTGR+NP+M +KI +EYYG+ + +A INTP+ ++I
Sbjct: 8 DAEEKMEKAVNVAKEDMGSIRTGRANPSMFNKINIEYYGAMTPVTQVASINTPEPRLVVI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
+PY+ S+L+ IE AI +SDLG+ P NDG +IR+ +PQLT ERR++L K + E+ KV
Sbjct: 68 KPYEASTLRDIETAIRNSDLGVNPTNDGTIIRVAIPQLTEERRRDLVKQAKGKGEDAKVA 127
Query: 219 M 219
+
Sbjct: 128 I 128
>gi|385817841|ref|YP_005854231.1| ribosome recycling factor [Lactobacillus amylovorus GRL1118]
gi|327183779|gb|AEA32226.1| ribosome recycling factor [Lactobacillus amylovorus GRL1118]
Length = 185
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 86/122 (70%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K + M+++I + + S+R G +N A+LD ++VEYYG+P L ++ I P+ LL
Sbjct: 7 KKAQENMDKSIKVYQKKLASIRAGVANAALLDNVQVEYYGAPTPLIQMSSITIPEPRVLL 66
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
I PYD++SL IE A+++S+LG+TP NDG+VIRL +PQLT ERR+E++K V K AEE K+
Sbjct: 67 ITPYDQNSLDDIEHALLASNLGLTPANDGKVIRLVIPQLTGERREEIAKEVGKYAEEAKI 126
Query: 218 VM 219
+
Sbjct: 127 AV 128
>gi|229829209|ref|ZP_04455278.1| hypothetical protein GCWU000342_01296 [Shuttleworthia satelles DSM
14600]
gi|229792372|gb|EEP28486.1| hypothetical protein GCWU000342_01296 [Shuttleworthia satelles DSM
14600]
Length = 189
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 84/117 (71%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M+++++ + + S+R GR+NP +LDKIEVEYYG+P L+ +A ++ P++ + IQP++
Sbjct: 16 KMKKSVNALLAEYVSIRAGRANPHILDKIEVEYYGAPTPLQQVANVSVPEARMIQIQPWE 75
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
S LK IEKAI SD+G+ P NDG+ IRL P+LT +RRKEL K V K+ E KV +
Sbjct: 76 SSLLKEIEKAINMSDVGIHPTNDGKTIRLVFPELTEDRRKELVKDVKKKGENAKVAI 132
>gi|373251458|ref|ZP_09539576.1| ribosome recycling factor [Nesterenkonia sp. F]
Length = 185
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 86/119 (72%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+ +A ME ++ +F +VRTGR+NP++ K+ V+YYGSP L+ +A +TPD+ ++LI
Sbjct: 8 EAEASMESAVEATSEDFATVRTGRANPSLYSKVLVDYYGSPTPLQQLASFSTPDARTILI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
PYD S+++ IEKA+ S++G P+NDG+ IR+ +P++T ERRKE +K+V + E+ KV
Sbjct: 68 TPYDASAMREIEKALSDSEVGANPSNDGKQIRIVMPEMTEERRKEYAKLVKSKGEDHKV 126
>gi|188588017|ref|YP_001920606.1| ribosome recycling factor [Clostridium botulinum E3 str. Alaska
E43]
gi|251779568|ref|ZP_04822488.1| ribosome recycling factor [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|238689676|sp|B2V4F7.1|RRF_CLOBA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|188498298|gb|ACD51434.1| ribosome recycling factor [Clostridium botulinum E3 str. Alaska
E43]
gi|243083883|gb|EES49773.1| ribosome recycling factor [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 185
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 89/125 (71%)
Query: 95 SIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSS 154
I K+ + +M++T+ ++++ +++ GR+NP+MLDKI+++YYGS L A I++P+
Sbjct: 4 DIIKNAEEKMQKTVTVLKSELGTMKAGRANPSMLDKIQIDYYGSMCPLSQAANISSPEPR 63
Query: 155 SLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEE 214
L+I P++K LK IEKAI+ SDLG+ P+NDG +IRL +P+LT E RK+L K V K EE
Sbjct: 64 VLMITPWEKQLLKEIEKAILKSDLGLNPSNDGSIIRLVIPELTEETRKDLVKKVKKTGEE 123
Query: 215 GKVVM 219
KV +
Sbjct: 124 SKVAI 128
>gi|295106079|emb|CBL03622.1| ribosome recycling factor [Gordonibacter pamelaeae 7-10-1-b]
Length = 180
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/117 (50%), Positives = 80/117 (68%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
RMER + + F SVRTGR++ +LD+I+V+YYG P + +A I TPD+ L+I+P+D
Sbjct: 7 RMERALASLGEAFGSVRTGRASALLLDRIKVDYYGVPTPVNQMAGIKTPDAHMLVIEPWD 66
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
K L +IE AI+ SDLG+TP+NDG IRL P LT ERR+EL K AEE +V +
Sbjct: 67 KGVLGAIEHAIMESDLGVTPSNDGSCIRLPFPSLTEERRRELVKQCKNYAEEARVAV 123
>gi|212704264|ref|ZP_03312392.1| hypothetical protein DESPIG_02319 [Desulfovibrio piger ATCC 29098]
gi|212672344|gb|EEB32827.1| ribosome recycling factor [Desulfovibrio piger ATCC 29098]
Length = 186
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 82/121 (67%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + RME+ + + +F +RTGR+ A++D I+ +YYG+P + +A + PDS ++ I
Sbjct: 9 DTEDRMEKAMAALERDFQKLRTGRATTALVDGIKADYYGTPTPISQMASVAVPDSRTITI 68
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QP+DK + +EKAI+ SDLG+TP NDG +IR+ +P LT ERRKEL KV K E+ KV
Sbjct: 69 QPWDKGGISVVEKAILKSDLGLTPVNDGRIIRINIPPLTEERRKELVKVARKYTEDAKVA 128
Query: 219 M 219
+
Sbjct: 129 V 129
>gi|227878826|ref|ZP_03996733.1| ribosome recycling factor [Lactobacillus crispatus JV-V01]
gi|256843348|ref|ZP_05548836.1| ribosome recycling factor [Lactobacillus crispatus 125-2-CHN]
gi|256849833|ref|ZP_05555264.1| ribosome-recycling factor [Lactobacillus crispatus MV-1A-US]
gi|262046921|ref|ZP_06019881.1| ribosome recycling factor [Lactobacillus crispatus MV-3A-US]
gi|293381207|ref|ZP_06627215.1| ribosome recycling factor [Lactobacillus crispatus 214-1]
gi|295693144|ref|YP_003601754.1| ribosome-recycling factor [Lactobacillus crispatus ST1]
gi|423318464|ref|ZP_17296341.1| ribosome-recycling factor [Lactobacillus crispatus FB049-03]
gi|423321906|ref|ZP_17299777.1| ribosome-recycling factor [Lactobacillus crispatus FB077-07]
gi|227861574|gb|EEJ69186.1| ribosome recycling factor [Lactobacillus crispatus JV-V01]
gi|256614768|gb|EEU19969.1| ribosome recycling factor [Lactobacillus crispatus 125-2-CHN]
gi|256713322|gb|EEU28312.1| ribosome-recycling factor [Lactobacillus crispatus MV-1A-US]
gi|260572903|gb|EEX29463.1| ribosome recycling factor [Lactobacillus crispatus MV-3A-US]
gi|290922247|gb|EFD99241.1| ribosome recycling factor [Lactobacillus crispatus 214-1]
gi|295031250|emb|CBL50729.1| Ribosome-recycling factor [Lactobacillus crispatus ST1]
gi|405591360|gb|EKB64862.1| ribosome-recycling factor [Lactobacillus crispatus FB077-07]
gi|405594739|gb|EKB68130.1| ribosome-recycling factor [Lactobacillus crispatus FB049-03]
Length = 185
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 88/125 (70%), Gaps = 1/125 (0%)
Query: 95 SIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSS 154
+IEK K +M +I + + S+R G +N A+LD ++VEYYG+P L ++ I P+
Sbjct: 5 TIEK-AKTKMTDSIKVYQKRLASIRAGVANAALLDNVQVEYYGAPTPLTQMSSITIPEPR 63
Query: 155 SLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEE 214
LLI PYD++SL IE A+++S+LG+TP NDG+VIRL +PQLT ERR+E++K V K AEE
Sbjct: 64 VLLITPYDQNSLDDIEHALLASNLGLTPANDGKVIRLVIPQLTGERREEIAKEVGKFAEE 123
Query: 215 GKVVM 219
K+ +
Sbjct: 124 AKIAV 128
>gi|46579283|ref|YP_010091.1| ribosome recycling factor [Desulfovibrio vulgaris str.
Hildenborough]
gi|387152667|ref|YP_005701603.1| ribosome recycling factor [Desulfovibrio vulgaris RCH1]
gi|60390259|sp|Q72DQ9.1|RRF_DESVH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|46448697|gb|AAS95350.1| ribosome recycling factor [Desulfovibrio vulgaris str.
Hildenborough]
gi|311233111|gb|ADP85965.1| ribosome recycling factor [Desulfovibrio vulgaris RCH1]
Length = 186
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 87/126 (69%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
SI D + RME+ I + F+ +RTGR++ +++D I+V+YYG+P + +A + PDS
Sbjct: 4 DSILLDAEERMEKAIAALEREFSRLRTGRASASLVDGIKVDYYGTPTPISQVASVAVPDS 63
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
+ IQP+D+++ IEKAI+ SDLG+ P NDG++IR+ +P LT ERRK+L K+ K AE
Sbjct: 64 RCITIQPWDRNAFSLIEKAILKSDLGLNPVNDGKIIRINIPPLTEERRKDLGKMARKYAE 123
Query: 214 EGKVVM 219
E KV +
Sbjct: 124 EAKVAV 129
>gi|347734079|ref|ZP_08867131.1| ribosome recycling factor [Desulfovibrio sp. A2]
gi|347517171|gb|EGY24364.1| ribosome recycling factor [Desulfovibrio sp. A2]
Length = 184
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 86/121 (71%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + RME+ + + F +RTGR++ +++D I+V+YYG+P + +A ++ PDS +L I
Sbjct: 7 DAEERMEKALGALDREFAKLRTGRASTSLVDNIKVDYYGTPTPISQLASVSVPDSRTLTI 66
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QP+D+S+ +EKAI+ SDLG+ P NDG++IR+++P LT ERRK+L KV K EE KV
Sbjct: 67 QPWDRSAFPLVEKAIMKSDLGLNPVNDGKIIRISIPPLTEERRKDLVKVARKYTEEAKVA 126
Query: 219 M 219
+
Sbjct: 127 V 127
>gi|163941562|ref|YP_001646446.1| ribosome recycling factor [Bacillus weihenstephanensis KBAB4]
gi|229013007|ref|ZP_04170172.1| Ribosome-recycling factor [Bacillus mycoides DSM 2048]
gi|229061427|ref|ZP_04198772.1| Ribosome-recycling factor [Bacillus cereus AH603]
gi|229134631|ref|ZP_04263441.1| Ribosome-recycling factor [Bacillus cereus BDRD-ST196]
gi|229168563|ref|ZP_04296286.1| Ribosome-recycling factor [Bacillus cereus AH621]
gi|229174490|ref|ZP_04302022.1| Ribosome-recycling factor [Bacillus cereus MM3]
gi|423367867|ref|ZP_17345299.1| ribosome-recycling factor [Bacillus cereus VD142]
gi|423401334|ref|ZP_17378507.1| ribosome-recycling factor [Bacillus cereus BAG2X1-2]
gi|423452875|ref|ZP_17429728.1| ribosome-recycling factor [Bacillus cereus BAG5X1-1]
gi|423457993|ref|ZP_17434790.1| ribosome-recycling factor [Bacillus cereus BAG5X2-1]
gi|423470038|ref|ZP_17446782.1| ribosome-recycling factor [Bacillus cereus BAG6O-2]
gi|423477962|ref|ZP_17454677.1| ribosome-recycling factor [Bacillus cereus BAG6X1-1]
gi|423483414|ref|ZP_17460104.1| ribosome-recycling factor [Bacillus cereus BAG6X1-2]
gi|423488999|ref|ZP_17465681.1| ribosome-recycling factor [Bacillus cereus BtB2-4]
gi|423494724|ref|ZP_17471368.1| ribosome-recycling factor [Bacillus cereus CER057]
gi|423498484|ref|ZP_17475101.1| ribosome-recycling factor [Bacillus cereus CER074]
gi|423511858|ref|ZP_17488389.1| ribosome-recycling factor [Bacillus cereus HuA2-1]
gi|423518514|ref|ZP_17494995.1| ribosome-recycling factor [Bacillus cereus HuA2-4]
gi|423522346|ref|ZP_17498819.1| ribosome-recycling factor [Bacillus cereus HuA4-10]
gi|423558613|ref|ZP_17534915.1| ribosome-recycling factor [Bacillus cereus MC67]
gi|423592180|ref|ZP_17568211.1| ribosome-recycling factor [Bacillus cereus VD048]
gi|423598865|ref|ZP_17574865.1| ribosome-recycling factor [Bacillus cereus VD078]
gi|423661337|ref|ZP_17636506.1| ribosome-recycling factor [Bacillus cereus VDM022]
gi|423669398|ref|ZP_17644427.1| ribosome-recycling factor [Bacillus cereus VDM034]
gi|423674423|ref|ZP_17649362.1| ribosome-recycling factor [Bacillus cereus VDM062]
gi|229564221|sp|A9VT62.1|RRF_BACWK RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|163863759|gb|ABY44818.1| ribosome recycling factor [Bacillus weihenstephanensis KBAB4]
gi|228609050|gb|EEK66340.1| Ribosome-recycling factor [Bacillus cereus MM3]
gi|228614969|gb|EEK72071.1| Ribosome-recycling factor [Bacillus cereus AH621]
gi|228648892|gb|EEL04917.1| Ribosome-recycling factor [Bacillus cereus BDRD-ST196]
gi|228717850|gb|EEL69498.1| Ribosome-recycling factor [Bacillus cereus AH603]
gi|228748261|gb|EEL98121.1| Ribosome-recycling factor [Bacillus mycoides DSM 2048]
gi|401082728|gb|EJP90993.1| ribosome-recycling factor [Bacillus cereus VD142]
gi|401139434|gb|EJQ46996.1| ribosome-recycling factor [Bacillus cereus BAG5X1-1]
gi|401140965|gb|EJQ48520.1| ribosome-recycling factor [Bacillus cereus BAG6X1-2]
gi|401148377|gb|EJQ55870.1| ribosome-recycling factor [Bacillus cereus BAG5X2-1]
gi|401150817|gb|EJQ58269.1| ribosome-recycling factor [Bacillus cereus CER057]
gi|401160533|gb|EJQ67911.1| ribosome-recycling factor [Bacillus cereus CER074]
gi|401160722|gb|EJQ68097.1| ribosome-recycling factor [Bacillus cereus HuA2-4]
gi|401175040|gb|EJQ82243.1| ribosome-recycling factor [Bacillus cereus HuA4-10]
gi|401191881|gb|EJQ98903.1| ribosome-recycling factor [Bacillus cereus MC67]
gi|401232313|gb|EJR38815.1| ribosome-recycling factor [Bacillus cereus VD048]
gi|401237135|gb|EJR43592.1| ribosome-recycling factor [Bacillus cereus VD078]
gi|401298525|gb|EJS04125.1| ribosome-recycling factor [Bacillus cereus VDM034]
gi|401301378|gb|EJS06967.1| ribosome-recycling factor [Bacillus cereus VDM022]
gi|401309974|gb|EJS15307.1| ribosome-recycling factor [Bacillus cereus VDM062]
gi|401654324|gb|EJS71867.1| ribosome-recycling factor [Bacillus cereus BAG2X1-2]
gi|402428124|gb|EJV60221.1| ribosome-recycling factor [Bacillus cereus BAG6X1-1]
gi|402432247|gb|EJV64306.1| ribosome-recycling factor [Bacillus cereus BtB2-4]
gi|402437290|gb|EJV69314.1| ribosome-recycling factor [Bacillus cereus BAG6O-2]
gi|402450119|gb|EJV81953.1| ribosome-recycling factor [Bacillus cereus HuA2-1]
Length = 185
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 83/117 (70%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+ME+ + +VR GR++ ++LDK++V+YYG+P + +A I P++ L+IQPYD
Sbjct: 12 KMEKAVAAYSRELATVRAGRASSSVLDKVQVDYYGAPTPVVQLANITVPEARLLVIQPYD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
K+S+ IEKAI+ +DLG+ P+NDG VIR+ P LT ERR++L KVV K AEE KV +
Sbjct: 72 KTSIGDIEKAILKADLGLNPSNDGTVIRIAFPALTEERRRDLVKVVKKYAEEAKVAV 128
>gi|75764985|ref|ZP_00744310.1| Ribosome Recycling Factor (RRF) [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|218898977|ref|YP_002447388.1| ribosome recycling factor [Bacillus cereus G9842]
gi|228902327|ref|ZP_04066484.1| Ribosome-recycling factor [Bacillus thuringiensis IBL 4222]
gi|228909648|ref|ZP_04073471.1| Ribosome-recycling factor [Bacillus thuringiensis IBL 200]
gi|228940912|ref|ZP_04103471.1| Ribosome-recycling factor [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228973841|ref|ZP_04134417.1| Ribosome-recycling factor [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228980430|ref|ZP_04140740.1| Ribosome-recycling factor [Bacillus thuringiensis Bt407]
gi|229031454|ref|ZP_04187454.1| Ribosome-recycling factor [Bacillus cereus AH1271]
gi|229098293|ref|ZP_04229240.1| Ribosome-recycling factor [Bacillus cereus Rock3-29]
gi|229104386|ref|ZP_04235055.1| Ribosome-recycling factor [Bacillus cereus Rock3-28]
gi|229117310|ref|ZP_04246688.1| Ribosome-recycling factor [Bacillus cereus Rock1-3]
gi|384187883|ref|YP_005573779.1| ribosome recycling factor [Bacillus thuringiensis serovar chinensis
CT-43]
gi|402558850|ref|YP_006601574.1| ribosome recycling factor [Bacillus thuringiensis HD-771]
gi|407706283|ref|YP_006829868.1| hypothetical protein MC28_3047 [Bacillus thuringiensis MC28]
gi|410676197|ref|YP_006928568.1| ribosome-recycling factor Frr [Bacillus thuringiensis Bt407]
gi|423359140|ref|ZP_17336643.1| ribosome-recycling factor [Bacillus cereus VD022]
gi|423378337|ref|ZP_17355621.1| ribosome-recycling factor [Bacillus cereus BAG1O-2]
gi|423385327|ref|ZP_17362583.1| ribosome-recycling factor [Bacillus cereus BAG1X1-2]
gi|423395875|ref|ZP_17373076.1| ribosome-recycling factor [Bacillus cereus BAG2X1-1]
gi|423406751|ref|ZP_17383900.1| ribosome-recycling factor [Bacillus cereus BAG2X1-3]
gi|423418269|ref|ZP_17395358.1| ribosome-recycling factor [Bacillus cereus BAG3X2-1]
gi|423441445|ref|ZP_17418351.1| ribosome-recycling factor [Bacillus cereus BAG4X2-1]
gi|423448329|ref|ZP_17425208.1| ribosome-recycling factor [Bacillus cereus BAG5O-1]
gi|423464519|ref|ZP_17441287.1| ribosome-recycling factor [Bacillus cereus BAG6O-1]
gi|423528315|ref|ZP_17504760.1| ribosome-recycling factor [Bacillus cereus HuB1-1]
gi|423533861|ref|ZP_17510279.1| ribosome-recycling factor [Bacillus cereus HuB2-9]
gi|423540870|ref|ZP_17517261.1| ribosome-recycling factor [Bacillus cereus HuB4-10]
gi|423547108|ref|ZP_17523466.1| ribosome-recycling factor [Bacillus cereus HuB5-5]
gi|423561770|ref|ZP_17538046.1| ribosome-recycling factor [Bacillus cereus MSX-A1]
gi|423612041|ref|ZP_17587902.1| ribosome-recycling factor [Bacillus cereus VD107]
gi|423615915|ref|ZP_17591749.1| ribosome-recycling factor [Bacillus cereus VD115]
gi|423623100|ref|ZP_17598878.1| ribosome-recycling factor [Bacillus cereus VD148]
gi|434376927|ref|YP_006611571.1| ribosome recycling factor [Bacillus thuringiensis HD-789]
gi|452200263|ref|YP_007480344.1| Ribosome recycling factor [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|226703252|sp|B7IUI3.1|RRF_BACC2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|74487527|gb|EAO51418.1| Ribosome Recycling Factor (RRF) [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|218541328|gb|ACK93722.1| ribosome recycling factor [Bacillus cereus G9842]
gi|228666210|gb|EEL21674.1| Ribosome-recycling factor [Bacillus cereus Rock1-3]
gi|228679084|gb|EEL33292.1| Ribosome-recycling factor [Bacillus cereus Rock3-28]
gi|228685191|gb|EEL39122.1| Ribosome-recycling factor [Bacillus cereus Rock3-29]
gi|228729743|gb|EEL80723.1| Ribosome-recycling factor [Bacillus cereus AH1271]
gi|228779250|gb|EEM27507.1| Ribosome-recycling factor [Bacillus thuringiensis Bt407]
gi|228785866|gb|EEM33869.1| Ribosome-recycling factor [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228818748|gb|EEM64814.1| Ribosome-recycling factor [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228849937|gb|EEM94768.1| Ribosome-recycling factor [Bacillus thuringiensis IBL 200]
gi|228857296|gb|EEN01799.1| Ribosome-recycling factor [Bacillus thuringiensis IBL 4222]
gi|326941592|gb|AEA17488.1| ribosome recycling factor [Bacillus thuringiensis serovar chinensis
CT-43]
gi|401085012|gb|EJP93258.1| ribosome-recycling factor [Bacillus cereus VD022]
gi|401106542|gb|EJQ14503.1| ribosome-recycling factor [Bacillus cereus BAG3X2-1]
gi|401128923|gb|EJQ36606.1| ribosome-recycling factor [Bacillus cereus BAG5O-1]
gi|401172058|gb|EJQ79279.1| ribosome-recycling factor [Bacillus cereus HuB4-10]
gi|401178829|gb|EJQ86002.1| ribosome-recycling factor [Bacillus cereus HuB5-5]
gi|401202027|gb|EJR08892.1| ribosome-recycling factor [Bacillus cereus MSX-A1]
gi|401247048|gb|EJR53392.1| ribosome-recycling factor [Bacillus cereus VD107]
gi|401259873|gb|EJR66047.1| ribosome-recycling factor [Bacillus cereus VD148]
gi|401260452|gb|EJR66625.1| ribosome-recycling factor [Bacillus cereus VD115]
gi|401635383|gb|EJS53138.1| ribosome-recycling factor [Bacillus cereus BAG1X1-2]
gi|401636603|gb|EJS54357.1| ribosome-recycling factor [Bacillus cereus BAG1O-2]
gi|401653617|gb|EJS71161.1| ribosome-recycling factor [Bacillus cereus BAG2X1-1]
gi|401660041|gb|EJS77524.1| ribosome-recycling factor [Bacillus cereus BAG2X1-3]
gi|401787502|gb|AFQ13541.1| ribosome recycling factor [Bacillus thuringiensis HD-771]
gi|401875484|gb|AFQ27651.1| ribosome recycling factor [Bacillus thuringiensis HD-789]
gi|402418106|gb|EJV50406.1| ribosome-recycling factor [Bacillus cereus BAG4X2-1]
gi|402420786|gb|EJV53057.1| ribosome-recycling factor [Bacillus cereus BAG6O-1]
gi|402451978|gb|EJV83797.1| ribosome-recycling factor [Bacillus cereus HuB1-1]
gi|402464080|gb|EJV95780.1| ribosome-recycling factor [Bacillus cereus HuB2-9]
gi|407383968|gb|AFU14469.1| Ribosome Recycling Factor [Bacillus thuringiensis MC28]
gi|409175326|gb|AFV19631.1| ribosome-recycling factor Frr [Bacillus thuringiensis Bt407]
gi|452105656|gb|AGG02596.1| Ribosome recycling factor [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 185
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 83/117 (70%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+ME+ + +VR GR++ ++LDK++V+YYG+P + +A I P++ L+IQPYD
Sbjct: 12 KMEKAVAAYSRELATVRAGRASSSVLDKVQVDYYGAPTPVVQLANITVPEARLLVIQPYD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
K+S+ IEKAI+ +DLG+ P+NDG VIR+ P LT ERR++L KVV K AEE KV +
Sbjct: 72 KTSIGDIEKAILKADLGLNPSNDGTVIRIAFPALTEERRRDLVKVVKKYAEEAKVAV 128
>gi|229019019|ref|ZP_04175860.1| Ribosome-recycling factor [Bacillus cereus AH1273]
gi|229025264|ref|ZP_04181684.1| Ribosome-recycling factor [Bacillus cereus AH1272]
gi|423389869|ref|ZP_17367095.1| ribosome-recycling factor [Bacillus cereus BAG1X1-3]
gi|228736017|gb|EEL86592.1| Ribosome-recycling factor [Bacillus cereus AH1272]
gi|228742259|gb|EEL92418.1| Ribosome-recycling factor [Bacillus cereus AH1273]
gi|401641960|gb|EJS59677.1| ribosome-recycling factor [Bacillus cereus BAG1X1-3]
Length = 185
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 83/117 (70%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+ME+ + +VR GR++ ++LDK++V+YYG+P + +A I P++ L+IQPYD
Sbjct: 12 KMEKAVAAYSRELATVRAGRASSSVLDKVQVDYYGAPTPVVQLANITVPEARLLVIQPYD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
K+S+ IEKAI+ +DLG+ P+NDG VIR+ P LT ERR++L KVV K AEE KV +
Sbjct: 72 KTSIGDIEKAILKADLGLNPSNDGTVIRIAFPALTEERRRDLVKVVKKYAEEAKVAV 128
>gi|387927006|ref|ZP_10129685.1| ribosome recycling factor [Bacillus methanolicus PB1]
gi|387589150|gb|EIJ81470.1| ribosome recycling factor [Bacillus methanolicus PB1]
Length = 185
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/121 (47%), Positives = 83/121 (68%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+ K +M + I S+R GR++ ++LD++ VEYYG P + +A I P+ L+I
Sbjct: 8 NAKEKMTKAIQAYTRELASIRAGRASASLLDRVTVEYYGVPTPVNQLAGITVPEPRLLVI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QPYDKS + IEKAI+ SDLG+ P +DG +IR+ +PQLT ERRKEL+KVV K++EE KV
Sbjct: 68 QPYDKSIIGEIEKAILKSDLGLNPTSDGSLIRIAIPQLTEERRKELAKVVKKESEEAKVA 127
Query: 219 M 219
+
Sbjct: 128 I 128
>gi|242242542|ref|ZP_04796987.1| peptide chain release factor RF4 [Staphylococcus epidermidis
W23144]
gi|416124341|ref|ZP_11595337.1| ribosome recycling factor [Staphylococcus epidermidis FRI909]
gi|418328011|ref|ZP_12939141.1| ribosome recycling factor [Staphylococcus epidermidis 14.1.R1.SE]
gi|418615583|ref|ZP_13178525.1| ribosome recycling factor [Staphylococcus epidermidis VCU118]
gi|418630361|ref|ZP_13192843.1| ribosome recycling factor [Staphylococcus epidermidis VCU128]
gi|418634058|ref|ZP_13196456.1| ribosome recycling factor [Staphylococcus epidermidis VCU129]
gi|420174973|ref|ZP_14681419.1| ribosome recycling factor [Staphylococcus epidermidis NIHLM061]
gi|420176905|ref|ZP_14683299.1| ribosome recycling factor [Staphylococcus epidermidis NIHLM057]
gi|420179498|ref|ZP_14685789.1| ribosome recycling factor [Staphylococcus epidermidis NIHLM053]
gi|420191236|ref|ZP_14697169.1| ribosome recycling factor [Staphylococcus epidermidis NIHLM037]
gi|420191694|ref|ZP_14697605.1| ribosome recycling factor [Staphylococcus epidermidis NIHLM023]
gi|420199043|ref|ZP_14704727.1| ribosome recycling factor [Staphylococcus epidermidis NIHLM031]
gi|420204181|ref|ZP_14709741.1| ribosome recycling factor [Staphylococcus epidermidis NIHLM015]
gi|242233969|gb|EES36281.1| peptide chain release factor RF4 [Staphylococcus epidermidis
W23144]
gi|319401451|gb|EFV89661.1| ribosome recycling factor [Staphylococcus epidermidis FRI909]
gi|365232398|gb|EHM73396.1| ribosome recycling factor [Staphylococcus epidermidis 14.1.R1.SE]
gi|374817022|gb|EHR81213.1| ribosome recycling factor [Staphylococcus epidermidis VCU118]
gi|374837902|gb|EHS01460.1| ribosome recycling factor [Staphylococcus epidermidis VCU128]
gi|374838050|gb|EHS01607.1| ribosome recycling factor [Staphylococcus epidermidis VCU129]
gi|394244506|gb|EJD89848.1| ribosome recycling factor [Staphylococcus epidermidis NIHLM061]
gi|394251812|gb|EJD96888.1| ribosome recycling factor [Staphylococcus epidermidis NIHLM057]
gi|394253702|gb|EJD98698.1| ribosome recycling factor [Staphylococcus epidermidis NIHLM053]
gi|394257837|gb|EJE02742.1| ribosome recycling factor [Staphylococcus epidermidis NIHLM037]
gi|394265845|gb|EJE10492.1| ribosome recycling factor [Staphylococcus epidermidis NIHLM023]
gi|394272729|gb|EJE17179.1| ribosome recycling factor [Staphylococcus epidermidis NIHLM031]
gi|394274195|gb|EJE18620.1| ribosome recycling factor [Staphylococcus epidermidis NIHLM015]
Length = 184
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/124 (46%), Positives = 89/124 (71%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
S I KD K+RM+++ID + ++ GR+N +L+ + V+YYG+P ++ +A IN P++
Sbjct: 2 SDIIKDTKSRMQKSIDNLSRELANISAGRANSNLLNGVTVDYYGAPTPVQQLASINVPEA 61
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
L+I PYDK+S+ IEKAI++++LG+ P +DGEVIR+++P LT ERRKEL K V K E
Sbjct: 62 RLLVISPYDKTSVADIEKAIIAANLGVNPTSDGEVIRISVPALTEERRKELVKEVKKIGE 121
Query: 214 EGKV 217
+ KV
Sbjct: 122 DAKV 125
>gi|116669931|ref|YP_830864.1| ribosome recycling factor [Arthrobacter sp. FB24]
gi|172044060|sp|A0JUP4.1|RRF_ARTS2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|116610040|gb|ABK02764.1| ribosome recycling factor [Arthrobacter sp. FB24]
Length = 185
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 85/115 (73%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M++ +++ + +F S+RTGR+ P + +++ V+YYGSP L+ +A PD+ ++LI P+D
Sbjct: 12 KMDKAVEVAKEDFASIRTGRATPGLYNRVLVDYYGSPTPLQQLASFAVPDARTILITPFD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
K++L+ IE+A+ S++G P+NDG VIR+T+P+LT ERRKE K+V + E+ KV
Sbjct: 72 KTALRDIERALSDSEVGANPSNDGNVIRITIPELTKERRKEYVKIVKAKGEDAKV 126
>gi|417647385|ref|ZP_12297225.1| ribosome recycling factor [Staphylococcus epidermidis VCU144]
gi|418325832|ref|ZP_12937035.1| ribosome recycling factor [Staphylococcus epidermidis VCU071]
gi|418411678|ref|ZP_12984944.1| ribosome-recycling factor [Staphylococcus epidermidis BVS058A4]
gi|420167615|ref|ZP_14674267.1| ribosome recycling factor [Staphylococcus epidermidis NIHLM087]
gi|420185437|ref|ZP_14691529.1| ribosome recycling factor [Staphylococcus epidermidis NIHLM040]
gi|329724306|gb|EGG60818.1| ribosome recycling factor [Staphylococcus epidermidis VCU144]
gi|365227578|gb|EHM68771.1| ribosome recycling factor [Staphylococcus epidermidis VCU071]
gi|394237643|gb|EJD83129.1| ribosome recycling factor [Staphylococcus epidermidis NIHLM087]
gi|394254423|gb|EJD99392.1| ribosome recycling factor [Staphylococcus epidermidis NIHLM040]
gi|410891261|gb|EKS39058.1| ribosome-recycling factor [Staphylococcus epidermidis BVS058A4]
Length = 184
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/124 (46%), Positives = 89/124 (71%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
S I KD K+RM+++ID + ++ GR+N +L+ + V+YYG+P ++ +A IN P++
Sbjct: 2 SDIIKDTKSRMQKSIDNLSRELANISAGRANSNLLNGVTVDYYGAPTPVQQLASINVPEA 61
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
L+I PYDK+S+ IEKAI++++LG+ P +DGEVIR+++P LT ERRKEL K V K E
Sbjct: 62 RLLVISPYDKTSVADIEKAIIAANLGVNPTSDGEVIRISVPALTEERRKELVKEVKKIGE 121
Query: 214 EGKV 217
+ KV
Sbjct: 122 DAKV 125
>gi|302389812|ref|YP_003825633.1| ribosome recycling factor [Thermosediminibacter oceani DSM 16646]
gi|302200440|gb|ADL08010.1| ribosome recycling factor [Thermosediminibacter oceani DSM 16646]
Length = 185
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/124 (45%), Positives = 91/124 (73%)
Query: 96 IEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSS 155
I K+ + RM++ + +++ ++R GR++ A+L+K+ V+YYG P + +A ++ P+
Sbjct: 5 IYKETEERMKKVLGNLKSELAAIRAGRASTALLEKVFVDYYGVPTPVNQVATVSVPEPRM 64
Query: 156 LLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEG 215
+LIQP+D L +IEKAI+ SDLG+TP +DG+VIRL LP+LTSERRKEL K+ K+AE+
Sbjct: 65 ILIQPWDVKMLSAIEKAILKSDLGLTPTSDGKVIRLILPELTSERRKELVKMAKKKAEDA 124
Query: 216 KVVM 219
KV++
Sbjct: 125 KVLV 128
>gi|120603155|ref|YP_967555.1| ribosome recycling factor [Desulfovibrio vulgaris DP4]
gi|166230784|sp|A1VFB2.1|RRF_DESVV RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|120563384|gb|ABM29128.1| ribosome recycling factor [Desulfovibrio vulgaris DP4]
Length = 186
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 87/125 (69%)
Query: 95 SIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSS 154
SI D + RME+ I + F+ +RTGR++ +++D I+V+YYG+P + +A + PDS
Sbjct: 5 SILLDAEERMEKAIAALEREFSRLRTGRASASLVDGIKVDYYGTPTPISQVASVAVPDSR 64
Query: 155 SLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEE 214
+ IQP+D+++ IEKAI+ SDLG+ P NDG++IR+ +P LT ERRK+L K+ K AEE
Sbjct: 65 CITIQPWDRNAFSLIEKAILKSDLGLNPVNDGKIIRINIPPLTEERRKDLGKMARKYAEE 124
Query: 215 GKVVM 219
KV +
Sbjct: 125 AKVAV 129
>gi|335357442|ref|ZP_08549312.1| ribosome recycling factor [Lactobacillus animalis KCTC 3501]
Length = 187
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 83/117 (70%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M + + ++ ++R G +N ++L+++ VEYYG P L +AQI+ P++ LLI PYD
Sbjct: 14 KMTKAEEALQRELGTIRAGVANASLLNRVNVEYYGVPTPLNQMAQISVPEARVLLITPYD 73
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
KSSLK IE A+++SDLG+ P NDG IRL +PQLT ERRKEL+K V +E+GKV +
Sbjct: 74 KSSLKDIEHALLASDLGIAPMNDGSAIRLVIPQLTEERRKELAKQVKATSEKGKVAV 130
>gi|325282615|ref|YP_004255156.1| Ribosome-recycling factor [Deinococcus proteolyticus MRP]
gi|324314424|gb|ADY25539.1| Ribosome-recycling factor [Deinococcus proteolyticus MRP]
Length = 183
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 88/127 (69%)
Query: 91 AEKSSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINT 150
++ +SI KD + RM ++I+ + +N +RTGR+NP +L K+ VEY+GS + + +A IN
Sbjct: 2 SDTNSIYKDARERMGKSIEALESNLGVLRTGRANPGILKKVMVEYFGSTMPIDQVASINA 61
Query: 151 PDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAK 210
PD+ +L + P+D+ +L IEKAI SDLG+ PNN G++I +++P LT ERRKE+ K
Sbjct: 62 PDARTLTVTPWDRGALNPIEKAIRDSDLGLNPNNKGDMIFISIPALTEERRKEMVKNAKS 121
Query: 211 QAEEGKV 217
AEE ++
Sbjct: 122 YAEEARI 128
>gi|386393636|ref|ZP_10078417.1| ribosome recycling factor [Desulfovibrio sp. U5L]
gi|385734514|gb|EIG54712.1| ribosome recycling factor [Desulfovibrio sp. U5L]
Length = 184
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 86/117 (73%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
RM++ + ++ F +RTGR+ ++LD + V+YYG+ L+ IA ++TPDS ++ IQP+D
Sbjct: 11 RMKKALSVLDKEFARLRTGRATTSLLDGVRVDYYGTVTPLEQIASVSTPDSRTITIQPWD 70
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
+ + +E+AI+ SDLG+TP NDG++IR+++P LT +RRK+L+KV K AEE KV +
Sbjct: 71 RKAFNDVERAILKSDLGLTPVNDGKIIRISIPPLTEDRRKDLAKVAKKYAEEAKVAI 127
>gi|357022051|ref|ZP_09084282.1| ribosome recycling factor [Mycobacterium thermoresistibile ATCC
19527]
gi|356479799|gb|EHI12936.1| ribosome recycling factor [Mycobacterium thermoresistibile ATCC
19527]
Length = 185
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 84/119 (70%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + +ME+ +D+ R + S+RTGR+NP M ++ ++YYG+P + ++ IN P++ ++I
Sbjct: 8 DAEEKMEKAVDVARDDLASIRTGRANPGMFSRVLIDYYGTPTPITQLSSINVPEARLVVI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
+PY+ + L++IE+AI +SDLG+ P NDG VIR+ +P LT ERR+EL K + EE KV
Sbjct: 68 KPYEANQLRNIEEAIRNSDLGLNPTNDGNVIRVAIPPLTEERRRELVKQAKAKGEEAKV 126
>gi|170017339|ref|YP_001728258.1| ribosome recycling factor [Leuconostoc citreum KM20]
gi|414597764|ref|ZP_11447322.1| Ribosome-recycling factor [Leuconostoc citreum LBAE E16]
gi|190360251|sp|B1MZ62.1|RRF_LEUCK RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|169804196|gb|ACA82814.1| Ribosome recycling factor [Leuconostoc citreum KM20]
gi|390481493|emb|CCF29383.1| Ribosome-recycling factor [Leuconostoc citreum LBAE E16]
Length = 181
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 86/119 (72%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D K+RM+ D ++ S+RTGR+NP +LD+IEVEYYG+ L +A I+ P++ LLI
Sbjct: 7 DAKSRMQGAQDALQRELTSIRTGRANPHILDRIEVEYYGAMTPLNQVASISVPEARVLLI 66
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
P+DK++L+ I +AI SDLG+ P++DG ++RL +PQ+T E RK+L+K V +AE+ KV
Sbjct: 67 TPFDKTALEEIIRAINMSDLGLNPSSDGNIVRLMIPQMTEEGRKDLAKQVKAEAEKAKV 125
>gi|386737646|ref|YP_006210827.1| Ribosome recycling factor [Bacillus anthracis str. H9401]
gi|384387498|gb|AFH85159.1| Ribosome recycling factor [Bacillus anthracis str. H9401]
Length = 185
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 82/117 (70%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+ME+ + +VR GR++ + LDK++V+YYG+P + +A I P++ L+IQPYD
Sbjct: 12 KMEKAVAAYSRELATVRAGRASASALDKVQVDYYGAPTPVVQLANITVPEARLLVIQPYD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
K+S+ IEKAI+ +DLG+ P+NDG VIR+ P LT ERR++L KVV K AEE KV +
Sbjct: 72 KTSIGDIEKAILKADLGLNPSNDGTVIRIAFPALTEERRRDLVKVVKKYAEEAKVAV 128
>gi|421879779|ref|ZP_16311236.1| Ribosome-recycling factor [Leuconostoc citreum LBAE C11]
gi|390446333|emb|CCF27356.1| Ribosome-recycling factor [Leuconostoc citreum LBAE C11]
Length = 181
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 86/119 (72%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D K+RM+ D ++ S+RTGR+NP +LD+IEVEYYG+ L +A I+ P++ LLI
Sbjct: 7 DAKSRMQGAQDALQRELTSIRTGRANPHILDRIEVEYYGAMTPLNQVASISVPEARVLLI 66
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
P+DK++L+ I +AI SDLG+ P++DG ++RL +PQ+T E RK+L+K V +AE+ KV
Sbjct: 67 TPFDKTALEEIIRAINMSDLGLNPSSDGNIVRLMIPQMTEEGRKDLAKQVKAEAEKAKV 125
>gi|420237036|ref|ZP_14741509.1| ribosome recycling factor [Parascardovia denticolens IPLA 20019]
gi|391879732|gb|EIT88236.1| ribosome recycling factor [Parascardovia denticolens IPLA 20019]
Length = 183
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 86/125 (68%)
Query: 95 SIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSS 154
S+ + ++M++TI+ + NF +RTGR+NPA+ + + V+YYG+P SLK++A I D+
Sbjct: 2 SVVDEAGSQMDKTIETTKENFVGIRTGRANPALFNGLTVDYYGAPTSLKALASIGVADNR 61
Query: 155 SLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEE 214
+L + P+D + SIEKAI SDLG+ P DG VI +TLP+LT ERRK+ K+ + AE
Sbjct: 62 TLSVTPFDVTQAGSIEKAIRDSDLGVNPRRDGNVIHVTLPELTEERRKDYVKLAHEIAER 121
Query: 215 GKVVM 219
GKV +
Sbjct: 122 GKVAV 126
>gi|294786947|ref|ZP_06752201.1| ribosome recycling factor [Parascardovia denticolens F0305]
gi|315226584|ref|ZP_07868372.1| ribosome recycling factor [Parascardovia denticolens DSM 10105 =
JCM 12538]
gi|294485780|gb|EFG33414.1| ribosome recycling factor [Parascardovia denticolens F0305]
gi|315120716|gb|EFT83848.1| ribosome recycling factor [Parascardovia denticolens DSM 10105 =
JCM 12538]
Length = 183
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 86/125 (68%)
Query: 95 SIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSS 154
S+ + ++M++TI+ + NF +RTGR+NPA+ + + V+YYG+P SLK++A I D+
Sbjct: 2 SVVDEASSQMDKTIETTKENFVGIRTGRANPALFNGLTVDYYGAPTSLKALASIGVADNR 61
Query: 155 SLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEE 214
+L + P+D + SIEKAI SDLG+ P DG VI +TLP+LT ERRK+ K+ + AE
Sbjct: 62 TLSVTPFDVTQAGSIEKAIRDSDLGVNPRRDGNVIHVTLPELTEERRKDYVKLAHEIAER 121
Query: 215 GKVVM 219
GKV +
Sbjct: 122 GKVAV 126
>gi|269118716|ref|YP_003306893.1| ribosome recycling factor [Sebaldella termitidis ATCC 33386]
gi|268612594|gb|ACZ06962.1| ribosome recycling factor [Sebaldella termitidis ATCC 33386]
Length = 185
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 87/122 (71%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K+ + +ME+ ++ + F S+R GR+N +MLD I V+ YG+P L I ++ P++ L
Sbjct: 7 KETETKMEKAVESTKDKFASIRAGRANVSMLDGITVDAYGAPSPLSQIGTLSAPEARLLT 66
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
I P+DKS + +IEKAI ++LG+ P+NDG +IRL++P+LT ERRKE K+V K+AEEGKV
Sbjct: 67 IDPWDKSLIPAIEKAIQQANLGLNPSNDGRIIRLSVPELTEERRKEYVKMVRKEAEEGKV 126
Query: 218 VM 219
+
Sbjct: 127 AI 128
>gi|404496113|ref|YP_006720219.1| ribosome recycling factor [Geobacter metallireducens GS-15]
gi|418065464|ref|ZP_12702837.1| ribosome recycling factor [Geobacter metallireducens RCH3]
gi|123572206|sp|Q39W85.1|RRF_GEOMG RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|78193722|gb|ABB31489.1| ribosome recycling factor [Geobacter metallireducens GS-15]
gi|373562204|gb|EHP88421.1| ribosome recycling factor [Geobacter metallireducens RCH3]
Length = 185
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/121 (46%), Positives = 86/121 (71%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D+KA ME+++D +R + VRTGR+ +LD I+VEYYG+P L +A ++ P+ ++ I
Sbjct: 8 DMKAHMEKSVDALRREYQKVRTGRATTGLLDDIKVEYYGNPSPLSQVATLSVPEPRTITI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QP++ + IEKAI++++LG TP NDG+ IR++LP LT ERRKE+ K + K AE+ KV
Sbjct: 68 QPWEAKLIPVIEKAIMNANLGFTPANDGKTIRISLPPLTEERRKEIVKTLKKMAEDTKVA 127
Query: 219 M 219
+
Sbjct: 128 V 128
>gi|81428873|ref|YP_395873.1| ribosome recycling factor [Lactobacillus sakei subsp. sakei 23K]
gi|123564051|sp|Q38W67.1|RRF_LACSS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|78610515|emb|CAI55566.1| Ribosome recycling factor (ribosome releasing factor) (RRF)
[Lactobacillus sakei subsp. sakei 23K]
Length = 185
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 83/119 (69%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K ME+ +R +R GR+N ++++++ VEYYG+ L IA I P++ LLI P
Sbjct: 10 KENMEKAEASLRRTLGQIRAGRANASLVNRVNVEYYGAMTPLNQIAAITIPEARVLLITP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
YDK +L+ IEKA+ ++D+G++P NDG VIRL +PQLT ERRKE++K V K+AE KVV+
Sbjct: 70 YDKGALEDIEKALYTADIGISPANDGSVIRLVIPQLTGERRKEIAKEVGKEAELAKVVV 128
>gi|366085842|ref|ZP_09452327.1| ribosome recycling factor [Lactobacillus zeae KCTC 3804]
Length = 185
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/119 (48%), Positives = 84/119 (70%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K M +T + ++ ++R GR+N ++L++I VEYYG+P L +A I P++ L I P
Sbjct: 10 KTNMGKTEESLQRELGNIRAGRANASLLNQITVEYYGAPTPLNQMAAITVPEARVLQISP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
YDKS+LK+IE AI +SDLG+ P NDG+VIRL +PQLT ERRKE++K V K +E K+ +
Sbjct: 70 YDKSALKNIETAINASDLGINPANDGDVIRLVIPQLTGERRKEIAKEVGKFSENAKIAV 128
>gi|304436535|ref|ZP_07396508.1| ribosome recycling factor [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304370478|gb|EFM24130.1| ribosome recycling factor [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 185
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/116 (50%), Positives = 81/116 (69%)
Query: 104 MERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDK 163
M + I+ +R F+S+R GR+ P +LDKI V YYG+P S+ +A++ P+ ++I P++K
Sbjct: 13 MSKAIEALRREFSSLRAGRATPNLLDKIMVPYYGTPTSVNQLAKVTVPEPHMIVITPWEK 72
Query: 164 SSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
S L IE AI SDLG++PN+DG VIRL +PQ T ERRKEL K V K+ EE KV +
Sbjct: 73 SILHEIEIAISKSDLGLSPNSDGNVIRLAIPQPTQERRKELIKTVGKKTEEAKVAL 128
>gi|413923971|gb|AFW63903.1| hypothetical protein ZEAMMB73_990401 [Zea mays]
Length = 153
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/104 (59%), Positives = 81/104 (77%), Gaps = 2/104 (1%)
Query: 61 VKLSNKPIVVRQLAHKRNGVVRCATIEEIEAEKSSIEKDVKARMERTIDMVRTNFNSVRT 120
V + +P+V + + V+ ATIEEIEAEKS IE K +ME+ I++V+ NFN+VRT
Sbjct: 51 VDFAGRPLVFGR--SDKRAVLMHATIEEIEAEKSFIEDQAKEKMEKAIEIVQANFNTVRT 108
Query: 121 GRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKS 164
GR+NPAMLD+IEVEYY + V+LKSIAQI+TPD++SLL QPYDKS
Sbjct: 109 GRANPAMLDRIEVEYYRTLVNLKSIAQISTPDATSLLNQPYDKS 152
>gi|238924132|ref|YP_002937648.1| ribosome recycling factor [Eubacterium rectale ATCC 33656]
gi|259494542|sp|C4ZA73.1|RRF_EUBR3 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|238875807|gb|ACR75514.1| ribosome recycling factor [Eubacterium rectale ATCC 33656]
gi|291524866|emb|CBK90453.1| ribosome recycling factor [Eubacterium rectale DSM 17629]
gi|291529007|emb|CBK94593.1| ribosome recycling factor [Eubacterium rectale M104/1]
Length = 184
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 85/117 (72%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+ME+T++ + + +R GR+NP +LDK+ V+YYG+P ++S+A ++ P+ + IQP++
Sbjct: 11 KMEKTLNNLEEEYAGIRAGRANPHILDKLRVDYYGTPSPIQSVANVSVPEPRMIQIQPWE 70
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
S +K IEKAI SD+G+ P NDG++IRL P+LT ERRK+L+K + K+ EE KV +
Sbjct: 71 ASMVKEIEKAINCSDIGINPTNDGKLIRLVFPELTEERRKDLAKDIKKKGEEAKVAV 127
>gi|292670556|ref|ZP_06603982.1| ribosome recycling factor [Selenomonas noxia ATCC 43541]
gi|292647722|gb|EFF65694.1| ribosome recycling factor [Selenomonas noxia ATCC 43541]
Length = 185
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 81/116 (69%)
Query: 104 MERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDK 163
M + ID++R F+S+R GR+ P +LDK+ V YYG+P S+ +A++ P+ ++I P++K
Sbjct: 13 MNKAIDVLRREFSSLRAGRATPNLLDKVMVPYYGTPTSVNQLAKVTVPEPHMIVITPWEK 72
Query: 164 SSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
L IE AI SDLG++PN+DG VIRL +PQ T ERRKEL K V K+ EE KV +
Sbjct: 73 EILHDIEIAISKSDLGLSPNSDGTVIRLAVPQPTQERRKELIKTVGKKTEEAKVAL 128
>gi|153815802|ref|ZP_01968470.1| hypothetical protein RUMTOR_02047 [Ruminococcus torques ATCC 27756]
gi|317502106|ref|ZP_07960287.1| ribosome recycling factor [Lachnospiraceae bacterium 8_1_57FAA]
gi|331090380|ref|ZP_08339261.1| ribosome-recycling factor [Lachnospiraceae bacterium 3_1_46FAA]
gi|336440188|ref|ZP_08619782.1| ribosome-recycling factor [Lachnospiraceae bacterium 1_1_57FAA]
gi|145846827|gb|EDK23745.1| ribosome recycling factor [Ruminococcus torques ATCC 27756]
gi|316896495|gb|EFV18585.1| ribosome recycling factor [Lachnospiraceae bacterium 8_1_57FAA]
gi|330401127|gb|EGG80720.1| ribosome-recycling factor [Lachnospiraceae bacterium 3_1_46FAA]
gi|336013855|gb|EGN43726.1| ribosome-recycling factor [Lachnospiraceae bacterium 1_1_57FAA]
Length = 183
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/118 (46%), Positives = 84/118 (71%)
Query: 102 ARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPY 161
++M +TI+ + ++R GR+NP +LDK+ V+YYGSP ++ +A ++ P++ + IQP+
Sbjct: 10 SKMTKTINNLDGELATIRAGRANPHVLDKLTVDYYGSPTPIQQVANVSVPEARMIQIQPW 69
Query: 162 DKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
+KS LK IEKAI+ SDLG+ P NDG +RL P+LT +RRKEL+K V K+ E KV +
Sbjct: 70 EKSMLKEIEKAILMSDLGINPTNDGSTVRLVFPELTEDRRKELAKDVKKKGEAAKVAV 127
>gi|335046798|ref|ZP_08539821.1| ribosome recycling factor [Oribacterium sp. oral taxon 108 str.
F0425]
gi|363897315|ref|ZP_09323854.1| ribosome-recycling factor [Oribacterium sp. ACB7]
gi|363899292|ref|ZP_09325802.1| ribosome-recycling factor [Oribacterium sp. ACB1]
gi|395209658|ref|ZP_10398752.1| ribosome recycling factor [Oribacterium sp. ACB8]
gi|333760584|gb|EGL38141.1| ribosome recycling factor [Oribacterium sp. oral taxon 108 str.
F0425]
gi|361958812|gb|EHL12109.1| ribosome-recycling factor [Oribacterium sp. ACB7]
gi|361959129|gb|EHL12425.1| ribosome-recycling factor [Oribacterium sp. ACB1]
gi|394705289|gb|EJF12818.1| ribosome recycling factor [Oribacterium sp. ACB8]
Length = 184
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 82/117 (70%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M +T D + + ++R GR+NP +LD+I V+YYG+ ++ + I+ P++ + IQP+D
Sbjct: 11 KMHKTHDNLMSELATIRAGRANPHVLDRITVDYYGTQTPIQQVGNISVPEARIIQIQPWD 70
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
KS +K IEKAI SDLG+ P NDG+VIRL P+LT ERRKEL+K V K+ E KV +
Sbjct: 71 KSVMKEIEKAINMSDLGINPTNDGQVIRLVFPELTEERRKELTKDVKKKGEAAKVAI 127
>gi|256851266|ref|ZP_05556655.1| ribosome recycling factor [Lactobacillus jensenii 27-2-CHN]
gi|260660690|ref|ZP_05861605.1| ribosome recycling factor [Lactobacillus jensenii 115-3-CHN]
gi|297206133|ref|ZP_06923528.1| ribosome recycling factor [Lactobacillus jensenii JV-V16]
gi|256616328|gb|EEU21516.1| ribosome recycling factor [Lactobacillus jensenii 27-2-CHN]
gi|260548412|gb|EEX24387.1| ribosome recycling factor [Lactobacillus jensenii 115-3-CHN]
gi|297149259|gb|EFH29557.1| ribosome recycling factor [Lactobacillus jensenii JV-V16]
Length = 185
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 86/119 (72%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K M+++I + + ++R G +N ++L+ ++V+YYG P L ++ + P++ LL+ P
Sbjct: 10 KENMDKSIAVYQKELGNIRAGVANASLLEGVKVDYYGVPTPLTQMSSVTIPEARVLLVTP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
YDKSSL +IE A+++SDLG+TP NDG VIRL +PQLT ERR+E++K V KQAE+ K+ +
Sbjct: 70 YDKSSLDNIEHALLASDLGLTPANDGNVIRLVIPQLTGERREEIAKQVGKQAEQAKIAI 128
>gi|229552426|ref|ZP_04441151.1| ribosome recycling factor [Lactobacillus rhamnosus LMS2-1]
gi|258539797|ref|YP_003174296.1| ribosome recycling factor [Lactobacillus rhamnosus Lc 705]
gi|385835448|ref|YP_005873222.1| ribosome recycling factor [Lactobacillus rhamnosus ATCC 8530]
gi|229314163|gb|EEN80136.1| ribosome recycling factor [Lactobacillus rhamnosus LMS2-1]
gi|257151473|emb|CAR90445.1| Ribosome-recycling factor [Lactobacillus rhamnosus Lc 705]
gi|355394939|gb|AER64369.1| ribosome recycling factor [Lactobacillus rhamnosus ATCC 8530]
Length = 185
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/119 (48%), Positives = 84/119 (70%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K M +T + ++ ++R GR+N ++L++I V+YYG+P L +A I P++ L I P
Sbjct: 10 KVNMGKTEESLQRELGNIRAGRANASLLNQITVDYYGAPTPLNQMAAITVPEARVLQISP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
YDKSSLK+IE AI +SDLG+ P NDG+VIRL +PQLT ERRKE++K V K +E K+ +
Sbjct: 70 YDKSSLKNIETAINASDLGINPANDGDVIRLVIPQLTGERRKEIAKEVGKFSENAKIAI 128
>gi|269955983|ref|YP_003325772.1| ribosome recycling factor [Xylanimonas cellulosilytica DSM 15894]
gi|269304664|gb|ACZ30214.1| ribosome recycling factor [Xylanimonas cellulosilytica DSM 15894]
Length = 185
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 83/117 (70%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M++ I++ + +F +RTGR+N M KI V+YYG+P L+ +A N P++ S+LI P+D
Sbjct: 12 KMDKAIEVAKEDFAGIRTGRANAGMFSKIVVDYYGAPTPLQQLASFNIPEARSVLISPFD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
KSS+ +IEKA+ SDLG+ P+NDG IR+ LP LT ERR++ K+ +AE+ ++ +
Sbjct: 72 KSSMAAIEKALRDSDLGVNPSNDGNAIRIVLPALTEERRRDYVKLAKTKAEDARITV 128
>gi|421876656|ref|ZP_16308211.1| Ribosome-recycling factor [Leuconostoc citreum LBAE C10]
gi|372557530|emb|CCF24331.1| Ribosome-recycling factor [Leuconostoc citreum LBAE C10]
Length = 181
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 86/119 (72%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D K+RM+ D ++ S+RTGR+NP +LD+IEVEYYG+ L +A I+ P++ LLI
Sbjct: 7 DAKSRMQGAQDALQRELTSIRTGRANPHILDRIEVEYYGAMTPLNQVASISVPEARVLLI 66
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
P+DK++L+ I +AI SDLG+ P++DG ++RL +PQ+T E RK+L+K V +AE+ KV
Sbjct: 67 TPFDKTALEEIIRAINMSDLGLNPSSDGNIVRLMIPQMTEEGRKDLAKQVKAEAEKAKV 125
>gi|118472629|ref|YP_886878.1| ribosome recycling factor [Mycobacterium smegmatis str. MC2 155]
gi|399986895|ref|YP_006567244.1| ribosome-recycling factor [Mycobacterium smegmatis str. MC2 155]
gi|441207141|ref|ZP_20973381.1| ribosome recycling factor [Mycobacterium smegmatis MKD8]
gi|166230801|sp|A0QVE0.1|RRF_MYCS2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|118173916|gb|ABK74812.1| ribosome recycling factor [Mycobacterium smegmatis str. MC2 155]
gi|399231456|gb|AFP38949.1| Ribosome-recycling factor [Mycobacterium smegmatis str. MC2 155]
gi|440628038|gb|ELQ89840.1| ribosome recycling factor [Mycobacterium smegmatis MKD8]
Length = 185
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 83/119 (69%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + +ME+ + + R S+RTGR+NP M ++I ++YYGS + +A IN P++ ++I
Sbjct: 8 DAEEKMEKAVSVARDELGSIRTGRANPGMFNRINIDYYGSMTPITQLASINVPEARLVVI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
+PY+ S L++IE AI +SDLG+ P+NDG +IR+ +PQLT ERR+EL K + E+ KV
Sbjct: 68 KPYEASQLRAIEDAIRNSDLGVNPSNDGNIIRVAIPQLTEERRRELVKQAKSKGEDAKV 126
>gi|423348974|ref|ZP_17326630.1| ribosome recycling factor [Scardovia wiggsiae F0424]
gi|393703203|gb|EJD65404.1| ribosome recycling factor [Scardovia wiggsiae F0424]
Length = 184
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 89/126 (70%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+++ +D +++ME+TI+ + NF +RTGR+NPA+ + + V+YYG+P LK++A + D+
Sbjct: 2 ATVVEDAQSQMEKTIESTKENFVGIRTGRANPALFNGLTVDYYGAPTPLKALASVGVSDN 61
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
+L + P+D S +IEKAI SDLG+ P DG VI +TLP+LT ERR++ K+ + AE
Sbjct: 62 RTLAVTPFDVSQCAAIEKAIRDSDLGVNPRRDGNVIHVTLPELTEERRRDYVKLAREFAE 121
Query: 214 EGKVVM 219
+GK+ +
Sbjct: 122 KGKIAI 127
>gi|283778745|ref|YP_003369500.1| ribosome recycling factor [Pirellula staleyi DSM 6068]
gi|283437198|gb|ADB15640.1| ribosome recycling factor [Pirellula staleyi DSM 6068]
Length = 186
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 82/119 (68%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
DV+ RME+ I +++ +RTGR+NP ++D + VE YGSP +KS+A + P+ ++I
Sbjct: 9 DVEERMEKAISVLKGQLAGIRTGRANPGLVDSLRVEVYGSPTPMKSLASVGAPEPQQIVI 68
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
+PYD S++K IEKAI++S LG P NDG VIRL +P LT+E R++L + + EE KV
Sbjct: 69 RPYDASTIKDIEKAIIASGLGFAPQNDGRVIRLNVPPLTTETRRKLVARIKELTEEAKV 127
>gi|350562908|ref|ZP_08931731.1| ribosome recycling factor [Thioalkalimicrobium aerophilum AL3]
gi|349779774|gb|EGZ34115.1| ribosome recycling factor [Thioalkalimicrobium aerophilum AL3]
Length = 185
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 88/126 (69%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
S I D +RM++++D + TNF +RTGR++P++LD ++V+YYGS V + +A IN D+
Sbjct: 3 SEIRSDADSRMQKSVDTLVTNFAKIRTGRAHPSILDSVKVDYYGSEVPISQVANINVEDA 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
+L +QP+++ L+ IEKAI+ SDLG+ P G ++R+ +P LT ERRKE +K+ +AE
Sbjct: 63 RTLTVQPWEQPMLQKIEKAIMMSDLGINPVTTGNMMRIPMPMLTEERRKEFAKLARSEAE 122
Query: 214 EGKVVM 219
KV +
Sbjct: 123 NAKVAI 128
>gi|418324143|ref|ZP_12935394.1| ribosome recycling factor [Staphylococcus pettenkoferi VCU012]
gi|365227640|gb|EHM68832.1| ribosome recycling factor [Staphylococcus pettenkoferi VCU012]
Length = 184
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/124 (48%), Positives = 87/124 (70%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
S I KD KARM+++ID + ++ GR+N +L+ + V+YYG+P ++ +A IN P++
Sbjct: 2 SDIIKDTKARMKKSIDSLSRELANISAGRANSNLLNGVTVDYYGAPTPIQQLASINVPEA 61
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
L+I PYDK S++ IEKAI +++LG+ P +DGEVIR+T+P LT ERRKEL K V K E
Sbjct: 62 RLLVISPYDKGSVEDIEKAINAANLGVNPTSDGEVIRITVPALTEERRKELFKEVKKIGE 121
Query: 214 EGKV 217
KV
Sbjct: 122 NAKV 125
>gi|357235149|ref|ZP_09122492.1| ribosome recycling factor [Streptococcus criceti HS-6]
gi|356883131|gb|EHI73331.1| ribosome recycling factor [Streptococcus criceti HS-6]
Length = 185
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/105 (53%), Positives = 76/105 (72%)
Query: 115 FNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIV 174
F+++R GR+N ++LD+IEVEYYG+P L +A I P++ LLI P+DK+S+K IE+AI
Sbjct: 24 FSAIRAGRANASLLDRIEVEYYGAPTPLNQLASITVPEARVLLISPFDKNSIKDIERAIN 83
Query: 175 SSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
SDLG+ P NDG VIRL +P LT E RKEL+K V K E K+ +
Sbjct: 84 ESDLGINPANDGSVIRLVIPALTEETRKELAKEVKKVGENAKIAI 128
>gi|407983130|ref|ZP_11163790.1| ribosome recycling factor [Mycobacterium hassiacum DSM 44199]
gi|407375266|gb|EKF24222.1| ribosome recycling factor [Mycobacterium hassiacum DSM 44199]
Length = 185
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 84/119 (70%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + +ME+ + + R +++RTGR+NPAM ++ V+YYG+P + ++ IN P++ ++I
Sbjct: 8 DAEEKMEKAVSVARDELSAIRTGRANPAMFARVTVDYYGAPTPITQLSSINVPEARLVVI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
+PY+ + LK+IE AI +SDLG+ P NDG VIR+ +PQLT ERR++L K + EE KV
Sbjct: 68 KPYEANQLKNIEDAIRNSDLGVNPTNDGTVIRVAIPQLTEERRRDLVKQAKAKGEEAKV 126
>gi|395238292|ref|ZP_10416229.1| Ribosome-recycling factor [Lactobacillus gigeriorum CRBIP 24.85]
gi|394477864|emb|CCI86206.1| Ribosome-recycling factor [Lactobacillus gigeriorum CRBIP 24.85]
Length = 192
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 83/117 (70%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K ME++I + + N S+R G +N +L+ + VEYYG P L ++ I P+ LL+ P
Sbjct: 16 KENMEKSIKVYQRNLASIRAGVANAGLLEGVRVEYYGVPTPLTQMSSITIPEPRVLLVTP 75
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
YD +SL +IE AI++S+LG+TP NDG+VIRL +PQLT ERR+E++K V K+AEE K+
Sbjct: 76 YDVNSLDNIEHAILASNLGLTPANDGKVIRLVIPQLTGERRQEIAKQVGKEAEEAKI 132
>gi|23099044|ref|NP_692510.1| ribosome recycling factor [Oceanobacillus iheyensis HTE831]
gi|33301568|sp|Q8EQV0.1|RRF_OCEIH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|22777272|dbj|BAC13545.1| ribosome recycling factor [Oceanobacillus iheyensis HTE831]
Length = 185
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 85/120 (70%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K+++ +ME+ + + N SVR GR+NP++LD + V+YYG+ L +A + P++ L
Sbjct: 7 KEMEQKMEQAVQALSKNLASVRAGRANPSILDSVFVDYYGASTPLNQLASVGAPEARLLT 66
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
I PYDKS++ IEKAI +DLG++P++DG +IR+ +P LT ERRK+L KVV K +EE KV
Sbjct: 67 ITPYDKSAIGDIEKAIQKADLGLSPSSDGNIIRINIPALTQERRKDLVKVVGKYSEEAKV 126
>gi|228998600|ref|ZP_04158187.1| Ribosome-recycling factor [Bacillus mycoides Rock3-17]
gi|229006100|ref|ZP_04163788.1| Ribosome-recycling factor [Bacillus mycoides Rock1-4]
gi|228755176|gb|EEM04533.1| Ribosome-recycling factor [Bacillus mycoides Rock1-4]
gi|228761068|gb|EEM10027.1| Ribosome-recycling factor [Bacillus mycoides Rock3-17]
Length = 185
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 81/117 (69%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+ME+ + SVR GR++ + LDK++V+YYG+P + +A I P++ L+IQPYD
Sbjct: 12 KMEKAVAAYSRELASVRAGRASASALDKVQVDYYGAPTPVVQLANITVPEARLLVIQPYD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
K+S+ IEKAI+ +DLG+ P+NDG VIR+ P LT ERR++L K V K AEE KV +
Sbjct: 72 KTSIGDIEKAILKADLGLNPSNDGSVIRIAFPALTEERRRDLVKTVKKYAEEAKVAV 128
>gi|199597107|ref|ZP_03210539.1| Ribosome recycling factor [Lactobacillus rhamnosus HN001]
gi|258508619|ref|YP_003171370.1| ribosome recycling factor [Lactobacillus rhamnosus GG]
gi|385828281|ref|YP_005866053.1| ribosome recycling factor [Lactobacillus rhamnosus GG]
gi|418070799|ref|ZP_12708074.1| ribosome recycling factor [Lactobacillus rhamnosus R0011]
gi|421768761|ref|ZP_16205471.1| Ribosome recycling factor [Lactobacillus rhamnosus LRHMDP2]
gi|421771087|ref|ZP_16207748.1| Ribosome recycling factor [Lactobacillus rhamnosus LRHMDP3]
gi|423078868|ref|ZP_17067545.1| ribosome recycling factor [Lactobacillus rhamnosus ATCC 21052]
gi|199591911|gb|EDY99985.1| Ribosome recycling factor [Lactobacillus rhamnosus HN001]
gi|257148546|emb|CAR87519.1| Ribosome-recycling factor [Lactobacillus rhamnosus GG]
gi|259649926|dbj|BAI42088.1| ribosome recycling factor [Lactobacillus rhamnosus GG]
gi|357540219|gb|EHJ24236.1| ribosome recycling factor [Lactobacillus rhamnosus R0011]
gi|357549156|gb|EHJ31004.1| ribosome recycling factor [Lactobacillus rhamnosus ATCC 21052]
gi|411185610|gb|EKS52737.1| Ribosome recycling factor [Lactobacillus rhamnosus LRHMDP2]
gi|411186522|gb|EKS53646.1| Ribosome recycling factor [Lactobacillus rhamnosus LRHMDP3]
Length = 185
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/119 (48%), Positives = 84/119 (70%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K M +T + ++ ++R GR+N ++L++I V+YYG+P L +A I P++ L I P
Sbjct: 10 KVNMGKTEESLQRELGNIRAGRANASLLNQITVDYYGAPTPLNQMAAITVPEARVLQISP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
YDKSSLK+IE AI +SDLG+ P NDG+VIRL +PQLT ERRKE++K V K +E K+ +
Sbjct: 70 YDKSSLKNIETAINASDLGINPANDGDVIRLVIPQLTGERRKEIAKEVGKFSENAKIAV 128
>gi|336053942|ref|YP_004562229.1| Ribosome-recycling factor [Lactobacillus kefiranofaciens ZW3]
gi|333957319|gb|AEG40127.1| Ribosome-recycling factor [Lactobacillus kefiranofaciens ZW3]
Length = 185
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 88/126 (69%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+ I K + M+++I + + S+R G +N A+LD ++V+YYG+P L ++ I P+
Sbjct: 3 NEIIKKTQENMDKSIKVYQKKLASIRAGVANAALLDNVQVQYYGAPTPLTQMSSITIPEP 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
LLI PYD++SL IE A+++S+LG+TP NDG+VIRL +PQLT ERR+E++K V K AE
Sbjct: 63 RVLLITPYDQNSLDDIEHALLASNLGLTPANDGKVIRLVIPQLTGERREEIAKEVGKYAE 122
Query: 214 EGKVVM 219
E K+ +
Sbjct: 123 EAKIAV 128
>gi|311105986|ref|YP_003978839.1| ribosome recycling factor [Achromobacter xylosoxidans A8]
gi|310760675|gb|ADP16124.1| ribosome recycling factor [Achromobacter xylosoxidans A8]
Length = 186
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 88/126 (69%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+ I K +ARM +++D ++TN +RTGR++ +LD ++VEYYGSPV + + +N D+
Sbjct: 4 AEIRKSAEARMAKSLDTLKTNLAKIRTGRAHTGILDHVQVEYYGSPVPISQVGNVNLVDA 63
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
++ +QPY+KS +IEKAI SDLG+ P + G+ IR+ +P LT ERR++L+KVV + E
Sbjct: 64 RTISVQPYEKSMAAAIEKAIRESDLGLNPMSMGDTIRVPMPALTEERRRDLTKVVRSEGE 123
Query: 214 EGKVVM 219
+ KV +
Sbjct: 124 DAKVAV 129
>gi|298245133|ref|ZP_06968939.1| ribosome recycling factor [Ktedonobacter racemifer DSM 44963]
gi|297552614|gb|EFH86479.1| ribosome recycling factor [Ktedonobacter racemifer DSM 44963]
Length = 185
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/121 (46%), Positives = 86/121 (71%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + RM+R ID ++ + S+RTGR++ ++LD+I V+YYG+P + +A I+ P++ ++I
Sbjct: 8 DAERRMKRAIDALKQDLGSIRTGRASASLLDRITVDYYGAPTPVNQVATISIPEARLIVI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QP+DK IEKAI SDLG+ PNNDG+VIRL +P + ERRK+L K + K+ +E KV
Sbjct: 68 QPWDKKISADIEKAIQKSDLGINPNNDGQVIRLNIPPMNEERRKDLVKSLHKKLDEHKVA 127
Query: 219 M 219
+
Sbjct: 128 V 128
>gi|383818722|ref|ZP_09974007.1| ribosome recycling factor [Mycobacterium phlei RIVM601174]
gi|383338186|gb|EID16552.1| ribosome recycling factor [Mycobacterium phlei RIVM601174]
Length = 185
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 84/119 (70%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + +ME+ + + R + S+RTGR+NP M ++ V+YYGSP + ++ IN P++ ++I
Sbjct: 8 DAEEKMEKAVSVARDDLGSIRTGRANPGMFARVSVDYYGSPTPITQLSSINVPEARLVVI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
+PY+ + L++IE+AI +SDLG+ P NDG VIR+ +PQLT ERR++L K + E+ KV
Sbjct: 68 KPYEANQLRNIEEAIRNSDLGVNPTNDGNVIRVAIPQLTEERRRDLVKQAKAKGEDAKV 126
>gi|377830778|ref|ZP_09813770.1| ribosome recycling factor [Lactobacillus mucosae LM1]
gi|377555396|gb|EHT17083.1| ribosome recycling factor [Lactobacillus mucosae LM1]
Length = 187
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 84/129 (65%)
Query: 91 AEKSSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINT 150
A+ I + K +M ++ D +R +R GR+N ++L+ ++VEYYG P L +A I
Sbjct: 2 ADGKQILAEAKEKMNKSGDALRRALADIRAGRANASLLNSVKVEYYGVPTPLNQVASITI 61
Query: 151 PDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAK 210
P++ LLI PYD+S L IEKAI +S+LG+TP NDG IRL +PQLT ERRKEL K V
Sbjct: 62 PEARQLLISPYDESLLGEIEKAIYASNLGLTPQNDGSAIRLVIPQLTEERRKELVKQVKA 121
Query: 211 QAEEGKVVM 219
+ E+ KV +
Sbjct: 122 EQEKAKVAV 130
>gi|421785178|ref|ZP_16221610.1| ribosome recycling factor [Serratia plymuthica A30]
gi|407752593|gb|EKF62744.1| ribosome recycling factor [Serratia plymuthica A30]
Length = 185
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/126 (46%), Positives = 90/126 (71%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+ I KD +RME++++ +T + +RTGR++P++LD I VEYYGS L+ +A + DS
Sbjct: 3 NEIRKDADSRMEKSVEAFKTQISKIRTGRASPSILDGIMVEYYGSATPLRQLANVTVEDS 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
+L I +D+S ++EKAI+SSDLG+ P++ G VIR+ LP LT ERRK+L KVV +AE
Sbjct: 63 RTLAINLFDRSLGSAVEKAIMSSDLGLNPSSAGSVIRVPLPPLTEERRKDLIKVVRNEAE 122
Query: 214 EGKVVM 219
+G+V +
Sbjct: 123 QGRVAV 128
>gi|386362238|ref|YP_006071569.1| ribosome recycling factor [Streptococcus pyogenes Alab49]
gi|350276647|gb|AEQ24015.1| ribosome recycling factor [Streptococcus pyogenes Alab49]
Length = 185
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 78/105 (74%)
Query: 115 FNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIV 174
++S+R GR+N ++LD+I+V+YYG+P L +A I P++ LLI P+DKSS+K IE+A+
Sbjct: 24 YSSIRAGRANASLLDRIQVDYYGAPTPLNQLASITVPEARVLLISPFDKSSIKDIERALN 83
Query: 175 SSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
+SDLG+TP NDG VIRL +P LT E RKEL+K V K E K+ +
Sbjct: 84 ASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGENAKIAI 128
>gi|325957056|ref|YP_004292468.1| ribosome recycling factor [Lactobacillus acidophilus 30SC]
gi|325333621|gb|ADZ07529.1| ribosome recycling factor [Lactobacillus acidophilus 30SC]
Length = 185
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 86/122 (70%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K + M+++I + + S+R G +N A+LD ++V+YYG+P L ++ I P+ LL
Sbjct: 7 KKAQENMDKSIKVYQKKLASIRAGVANAALLDNVQVQYYGAPTPLTQMSSITIPEPRVLL 66
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
I PYD++SL IE A+++S+LG+TP NDG+VIRL +PQLT ERR+E++K V K AEE K+
Sbjct: 67 ITPYDQNSLDDIEHALLASNLGLTPANDGKVIRLVIPQLTGERREEIAKEVGKYAEEAKI 126
Query: 218 VM 219
+
Sbjct: 127 AV 128
>gi|344940509|ref|ZP_08779797.1| Ribosome-recycling factor [Methylobacter tundripaludum SV96]
gi|344261701|gb|EGW21972.1| Ribosome-recycling factor [Methylobacter tundripaludum SV96]
Length = 185
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 88/126 (69%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
S I++D RM ++I+ ++ F+ +RTGR++P++LD+I V YYG+ SL +A I D+
Sbjct: 3 SDIQQDASTRMSKSIEALKHEFSKIRTGRAHPSLLDQINVSYYGTESSLSQVANIAVEDA 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
+L I P++K +++IEKAI+ SDLG+ P +G VIR+ LP LT ERR+ L KVV +AE
Sbjct: 63 RTLTITPWEKGMVQAIEKAIMKSDLGLNPATNGMVIRIPLPPLTEERRRSLVKVVKNEAE 122
Query: 214 EGKVVM 219
G+V +
Sbjct: 123 NGRVAI 128
>gi|239636263|ref|ZP_04677265.1| ribosome recycling factor [Staphylococcus warneri L37603]
gi|417643575|ref|ZP_12293617.1| ribosome recycling factor [Staphylococcus warneri VCU121]
gi|445059822|ref|YP_007385226.1| ribosome recycling factor [Staphylococcus warneri SG1]
gi|239597618|gb|EEQ80113.1| ribosome recycling factor [Staphylococcus warneri L37603]
gi|330685682|gb|EGG97323.1| ribosome recycling factor [Staphylococcus epidermidis VCU121]
gi|443425879|gb|AGC90782.1| ribosome recycling factor [Staphylococcus warneri SG1]
Length = 184
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/124 (47%), Positives = 88/124 (70%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
S I KD +ARM+++ID + ++ GR+N +L+ + V+YYG+P ++ +A IN P++
Sbjct: 2 SDIIKDTRARMQKSIDNLSKELANISAGRANSNLLNGVNVDYYGAPTPVQQLASINVPEA 61
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
L+I PYDKSS+ IEKAI +++LG+ P +DGEVIR+++P LT ERRKEL K V K E
Sbjct: 62 RLLVISPYDKSSVADIEKAINAANLGVNPTSDGEVIRISVPALTEERRKELVKDVKKIGE 121
Query: 214 EGKV 217
+ KV
Sbjct: 122 DAKV 125
>gi|160893344|ref|ZP_02074131.1| hypothetical protein CLOL250_00893 [Clostridium sp. L2-50]
gi|156865036|gb|EDO58467.1| ribosome recycling factor [Clostridium sp. L2-50]
Length = 181
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 54/117 (46%), Positives = 86/117 (73%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M +T++ + + ++R GR+NP +L+KI+VEYYG P ++ +A I P++ +L+I P++
Sbjct: 8 KMTKTVENLEGEYATIRAGRANPNILNKIKVEYYGVPTPMQQLANITVPEARTLMIAPWE 67
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
S +K+IEKAI++SDLG+TPNNDG+ I L P+LT ERRKE+ K + K+ E KV +
Sbjct: 68 PSLVKAIEKAILNSDLGLTPNNDGKNIILNFPELTEERRKEIVKDIKKKGENAKVAI 124
>gi|453383393|dbj|GAC82294.1| ribosome-recycling factor [Gordonia paraffinivorans NBRC 108238]
Length = 185
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 83/121 (68%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + +ME+ + + R + S+RTGR+NPAM I +EYYG+ + +A I TP+ ++I
Sbjct: 8 DAEEKMEKAVSVAREDMTSIRTGRANPAMFKGINIEYYGAVTPVTQVASITTPEPRLVVI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
+PY+ S+L+ IE AI +SDLG+ P NDG +IR+ +PQLT ERR+EL+K + E+ KV
Sbjct: 68 KPYEASTLRDIETAIRNSDLGVNPTNDGNIIRVAIPQLTEERRRELAKQARAKGEDAKVA 127
Query: 219 M 219
+
Sbjct: 128 I 128
>gi|383823902|ref|ZP_09979090.1| ribosome recycling factor [Mycobacterium xenopi RIVM700367]
gi|383338338|gb|EID16703.1| ribosome recycling factor [Mycobacterium xenopi RIVM700367]
Length = 185
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 82/119 (68%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + RME+ + + R + ++RTGR+NP M KI ++YYG+P + +A IN P++ ++I
Sbjct: 8 DAEERMEKAVSVARDDLATIRTGRANPGMFSKIVIDYYGAPTPITQLASINVPEARLVVI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
+PY+ + L +IE AI +SDLG+ P NDG +IR+ +PQLT ERR+EL K + EE +V
Sbjct: 68 KPYEANQLHAIETAIRNSDLGVNPTNDGTLIRVAVPQLTEERRRELVKQARHKGEEARV 126
>gi|270264817|ref|ZP_06193081.1| ribosome-recycling factor [Serratia odorifera 4Rx13]
gi|270041115|gb|EFA14215.1| ribosome-recycling factor [Serratia odorifera 4Rx13]
Length = 199
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/126 (46%), Positives = 90/126 (71%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+ I KD +RME++++ +T + +RTGR++P++LD I VEYYGS L+ +A + DS
Sbjct: 17 NEIRKDADSRMEKSVEAFKTQISKIRTGRASPSILDGIMVEYYGSATPLRQLANVTVEDS 76
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
+L I +D+S ++EKAI+SSDLG+ P++ G VIR+ LP LT ERRK+L KVV +AE
Sbjct: 77 RTLAINLFDRSLGSAVEKAIMSSDLGLNPSSAGSVIRVPLPPLTEERRKDLIKVVRNEAE 136
Query: 214 EGKVVM 219
+G+V +
Sbjct: 137 QGRVAV 142
>gi|401565136|ref|ZP_10805990.1| ribosome recycling factor [Selenomonas sp. FOBRC6]
gi|400188123|gb|EJO22298.1| ribosome recycling factor [Selenomonas sp. FOBRC6]
Length = 185
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 81/116 (69%)
Query: 104 MERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDK 163
M + I+ +R F+S+R GR+ P +LDK+ V YYG+P S+ +A++ P+ ++I P++K
Sbjct: 13 MNKAIEALRREFSSLRAGRATPNLLDKVMVPYYGTPTSVNQLAKVTVPEPHMIVITPWEK 72
Query: 164 SSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
S L IE AI SDLG++PN+DG VIRL +PQ T ERRKEL K V K+ EE KV +
Sbjct: 73 SILHEIEIAISKSDLGLSPNSDGTVIRLAIPQPTQERRKELIKTVGKKTEEAKVAL 128
>gi|336321195|ref|YP_004601163.1| ribosome recycling factor [[Cellvibrio] gilvus ATCC 13127]
gi|336104776|gb|AEI12595.1| ribosome recycling factor [[Cellvibrio] gilvus ATCC 13127]
Length = 185
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 82/114 (71%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M++ I++ + +F ++RTGR+N AM KI V+YYGSP L+ +A N ++ ++LI P+D
Sbjct: 12 KMDKAIEVAKDDFATIRTGRANAAMFSKIFVDYYGSPTPLQQLASFNVTEARTVLISPFD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGK 216
KS+ ++EKA+ SDLG+ PNNDG VIR+ LP LT ERR++ K+ +AE+ +
Sbjct: 72 KSATAAVEKALRDSDLGVNPNNDGNVIRVVLPALTEERRRDFVKLAKAKAEQAR 125
>gi|288905833|ref|YP_003431055.1| ribosome recycling factor [Streptococcus gallolyticus UCN34]
gi|306831922|ref|ZP_07465077.1| ribosome recycling factor [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|306834034|ref|ZP_07467155.1| ribosome recycling factor [Streptococcus bovis ATCC 700338]
gi|325978868|ref|YP_004288584.1| ribosome-recycling factor [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|336064767|ref|YP_004559626.1| ribosome recycling factor [Streptococcus pasteurianus ATCC 43144]
gi|386338302|ref|YP_006034471.1| ribosome recycling factor [Streptococcus gallolyticus subsp.
gallolyticus ATCC 43143]
gi|288732559|emb|CBI14131.1| ribosome recycling factor [Streptococcus gallolyticus UCN34]
gi|304423822|gb|EFM26967.1| ribosome recycling factor [Streptococcus bovis ATCC 700338]
gi|304425848|gb|EFM28965.1| ribosome recycling factor [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|325178796|emb|CBZ48840.1| Ribosome-recycling factor [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|334280938|dbj|BAK28512.1| ribosome recycling factor [Streptococcus gallolyticus subsp.
gallolyticus ATCC 43143]
gi|334282967|dbj|BAK30540.1| ribosome recycling factor [Streptococcus pasteurianus ATCC 43144]
Length = 185
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/124 (50%), Positives = 83/124 (66%), Gaps = 1/124 (0%)
Query: 96 IEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSS 155
IEK K R E++ + F ++R GR+N ++LD+I+VEYYG+ L +A I P++
Sbjct: 6 IEK-AKERFEQSHSSLAREFAAIRAGRANASLLDRIQVEYYGAMTPLNQLASITVPEARV 64
Query: 156 LLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEG 215
LLI P+DKSSLK IE AI +SDLG+ P NDG VIRL +P LT E RKEL+K V K E
Sbjct: 65 LLISPFDKSSLKDIEHAINASDLGINPANDGSVIRLVIPALTEETRKELAKEVKKVGENA 124
Query: 216 KVVM 219
KV +
Sbjct: 125 KVAI 128
>gi|255283877|ref|ZP_05348432.1| ribosome recycling factor [Bryantella formatexigens DSM 14469]
gi|255265598|gb|EET58803.1| ribosome recycling factor [Marvinbryantia formatexigens DSM 14469]
Length = 183
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 55/117 (47%), Positives = 81/117 (69%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M +T + + F ++R GR+NP +LD+I V+YYG+P ++ + +N P++ + IQP+D
Sbjct: 11 KMTKTYNNLLAEFGAIRAGRANPHVLDRIMVDYYGTPTPIQQVGNVNVPEARMIQIQPWD 70
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
S LK+I KAI +SDLG+ P NDG VIRL P+LT ERRK+L K V K+ E KV +
Sbjct: 71 TSMLKAITKAIQTSDLGINPTNDGRVIRLVFPELTEERRKDLVKEVKKKGEGAKVAV 127
>gi|126654121|ref|ZP_01725939.1| Frr [Bacillus sp. B14905]
gi|126589401|gb|EAZ83551.1| Frr [Bacillus sp. B14905]
Length = 185
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 84/119 (70%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K +M +TI +S+R GR+N ++LD+I V+YYG+P + +A ++ P++ L+I P
Sbjct: 10 KDKMNKTIAAFTRELSSIRAGRANASLLDRIMVDYYGAPTPINQLAGVSVPEARLLVITP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
YDK+ L IEKAI+ SD+G+TP NDG +IRL +P LT ERRK+L K V K+AE+ K+ +
Sbjct: 70 YDKTILGEIEKAIMKSDIGITPTNDGSIIRLMIPALTEERRKDLVKQVKKEAEDAKIAV 128
>gi|239908426|ref|YP_002955168.1| ribosome recycling factor [Desulfovibrio magneticus RS-1]
gi|259494539|sp|C4XMX9.1|RRF_DESMR RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|239798293|dbj|BAH77282.1| ribosome recycling factor [Desulfovibrio magneticus RS-1]
Length = 184
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 86/125 (68%)
Query: 95 SIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSS 154
++ KD + RM++ + + F+ +RTGR+ ++LD + V+YYG+ L +A + TPDS
Sbjct: 3 TVLKDAEDRMKKALAALDKEFSRLRTGRATTSLLDGVRVDYYGTATQLDQLASVATPDSR 62
Query: 155 SLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEE 214
++ IQP+D+ + IEKAI+ S LG+TP NDG++IR+++P LT +RRK+L KV K EE
Sbjct: 63 TITIQPWDRKAFADIEKAILKSGLGLTPVNDGKIIRISIPPLTEDRRKDLVKVAKKYVEE 122
Query: 215 GKVVM 219
KV M
Sbjct: 123 AKVAM 127
>gi|228992552|ref|ZP_04152479.1| Ribosome-recycling factor [Bacillus pseudomycoides DSM 12442]
gi|228767186|gb|EEM15822.1| Ribosome-recycling factor [Bacillus pseudomycoides DSM 12442]
Length = 185
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 81/117 (69%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+ME+ + SVR GR++ + LDK++V+YYG+P + +A I P++ L+IQPYD
Sbjct: 12 KMEKAVAAYSRELASVRAGRASASALDKVQVDYYGAPTPVVQLANITVPEARLLVIQPYD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
K+S+ IEKAI+ +DLG+ P+NDG VIR+ P LT ERR++L K V K AEE KV +
Sbjct: 72 KTSIGDIEKAILKADLGLNPSNDGSVIRIAFPALTEERRRDLVKTVKKYAEEAKVAV 128
>gi|294790919|ref|ZP_06756077.1| ribosome recycling factor [Scardovia inopinata F0304]
gi|294458816|gb|EFG27169.1| ribosome recycling factor [Scardovia inopinata F0304]
Length = 184
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 86/126 (68%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
S++ D + +M +TI+ + NF +RTGR+NPA+ + + V+YYG+P LK++A I D+
Sbjct: 2 STVVDDAQKQMNKTIESTKENFVGIRTGRANPALFNGLTVDYYGAPTPLKALATIGVTDN 61
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
+L + P+D S +IEKAI SDLG+ P DG VI +TLP+LT ERRK+ K+ + AE
Sbjct: 62 RTLAVTPFDVSQSAAIEKAIRDSDLGVNPRRDGNVIHVTLPELTEERRKDYVKLAHEFAE 121
Query: 214 EGKVVM 219
+GKV +
Sbjct: 122 KGKVAV 127
>gi|268610455|ref|ZP_06144182.1| ribosome recycling factor [Ruminococcus flavefaciens FD-1]
Length = 184
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 84/119 (70%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K +M + I+ + F S+R GR+NP++LDK+ V+YYG+P + +A ++ + +L+I P
Sbjct: 9 KEKMTKCINSLGNEFASIRAGRANPSVLDKVTVDYYGAPTPINQLAAVSVSEGRTLVISP 68
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
++K LK+IEKAI +SD+G+ P NDG VIRLT PQLT +RRKEL+K + E+ KV +
Sbjct: 69 WEKPQLKAIEKAIQASDIGINPTNDGNVIRLTFPQLTEDRRKELAKEIKGLGEKAKVTV 127
>gi|257068198|ref|YP_003154453.1| ribosome recycling factor [Brachybacterium faecium DSM 4810]
gi|256559016|gb|ACU84863.1| ribosome recycling factor [Brachybacterium faecium DSM 4810]
Length = 188
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 89/125 (71%)
Query: 95 SIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSS 154
SI KD +A+M++++++ + F ++RTGR+N AML I VEYYG+P L ++ + P++
Sbjct: 7 SILKDAEAKMKKSVEVTKDEFTAIRTGRANAAMLQGITVEYYGAPTPLNQLSSLQFPEAR 66
Query: 155 SLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEE 214
++++ PYDKS++ IE A+ SDLG+ P N+G+ +R+ LP LT ERRK+ K+ +AE+
Sbjct: 67 TIIVTPYDKSAMSGIETALRDSDLGVNPTNNGDNLRVVLPALTEERRKDYVKLARTKAED 126
Query: 215 GKVVM 219
G+V +
Sbjct: 127 GRVAV 131
>gi|262202045|ref|YP_003273253.1| ribosome recycling factor [Gordonia bronchialis DSM 43247]
gi|262085392|gb|ACY21360.1| ribosome recycling factor [Gordonia bronchialis DSM 43247]
Length = 185
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 84/119 (70%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + +ME+ + + + + S+RTGR+NPAM +K+ +EYYG+ + +A INTP+ ++I
Sbjct: 8 DAEEKMEKAVSVAKDDMGSIRTGRANPAMFNKVVIEYYGAMTPVTQVASINTPEPRLVVI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
+PY+ S+L+ IE AI +SDLG+ P NDG VIR+ +PQLT ERR++L K + E+ KV
Sbjct: 68 KPYEASTLRDIETAIRNSDLGVNPTNDGNVIRVAVPQLTEERRRDLVKQAKGKGEDAKV 126
>gi|313896240|ref|ZP_07829793.1| ribosome recycling factor [Selenomonas sp. oral taxon 137 str.
F0430]
gi|320529259|ref|ZP_08030351.1| ribosome recycling factor [Selenomonas artemidis F0399]
gi|402302919|ref|ZP_10822020.1| ribosome recycling factor [Selenomonas sp. FOBRC9]
gi|312975039|gb|EFR40501.1| ribosome recycling factor [Selenomonas sp. oral taxon 137 str.
F0430]
gi|320138889|gb|EFW30779.1| ribosome recycling factor [Selenomonas artemidis F0399]
gi|400379524|gb|EJP32363.1| ribosome recycling factor [Selenomonas sp. FOBRC9]
Length = 185
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 81/116 (69%)
Query: 104 MERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDK 163
M + I+ +R F+S+R GR+ P +LDK+ V YYG+P S+ +A++ P+ ++I P++K
Sbjct: 13 MTKAIESLRREFSSLRAGRATPNLLDKVMVPYYGTPTSVNQLAKVTVPEPHMIVITPWEK 72
Query: 164 SSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
S L IE AI SDLG++PN+DG VIRL +PQ T ERRKEL K V K+ EE KV +
Sbjct: 73 SVLHDIEIAISKSDLGLSPNSDGNVIRLAIPQPTQERRKELIKTVGKKTEEAKVAL 128
>gi|418052973|ref|ZP_12691050.1| Ribosome-recycling factor [Mycobacterium rhodesiae JS60]
gi|353179761|gb|EHB45318.1| Ribosome-recycling factor [Mycobacterium rhodesiae JS60]
Length = 185
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 85/119 (71%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + +ME+ + + R + +S+RTGR+NP M ++ V+YYGSP + ++ +N P++ ++I
Sbjct: 8 DAEEKMEKAVAVARDDLSSIRTGRANPGMFSRVVVDYYGSPTPITQLSSVNVPEARMVVI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
+PY+ S L++IE AI +SDLG+ P NDG +IR+++PQLT ERR++L K + E+ KV
Sbjct: 68 KPYEASQLRAIEDAIRNSDLGVNPTNDGNIIRVSIPQLTEERRRDLVKQAKSKGEDAKV 126
>gi|333928806|ref|YP_004502385.1| ribosome-recycling factor [Serratia sp. AS12]
gi|333933759|ref|YP_004507337.1| ribosome-recycling factor [Serratia plymuthica AS9]
gi|386330629|ref|YP_006026799.1| Ribosome-recycling factor [Serratia sp. AS13]
gi|333475366|gb|AEF47076.1| Ribosome-recycling factor [Serratia plymuthica AS9]
gi|333492866|gb|AEF52028.1| Ribosome-recycling factor [Serratia sp. AS12]
gi|333962962|gb|AEG29735.1| Ribosome-recycling factor [Serratia sp. AS13]
Length = 199
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/126 (46%), Positives = 90/126 (71%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+ I KD +RME++++ +T + +RTGR++P++LD I VEYYGS L+ +A + DS
Sbjct: 17 NEIRKDADSRMEKSVEAFKTQISKIRTGRASPSILDGIMVEYYGSATPLRQLANVTVEDS 76
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
+L I +D+S ++EKAI+SSDLG+ P++ G VIR+ LP LT ERRK+L KVV +AE
Sbjct: 77 RTLAINLFDRSLGSAVEKAIMSSDLGLNPSSAGSVIRVPLPPLTEERRKDLIKVVRNEAE 136
Query: 214 EGKVVM 219
+G+V +
Sbjct: 137 QGRVAV 142
>gi|242373550|ref|ZP_04819124.1| peptide chain release factor RF4 [Staphylococcus epidermidis
M23864:W1]
gi|242348913|gb|EES40515.1| peptide chain release factor RF4 [Staphylococcus epidermidis
M23864:W1]
Length = 184
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 58/124 (46%), Positives = 89/124 (71%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
S I KD KARM+++ID + ++ GR+N +L+ + V+YYG+P ++ +A I+ P++
Sbjct: 2 SDIIKDTKARMQKSIDNLSRELANISAGRANSNLLNGVTVDYYGAPTPVQQLASISVPEA 61
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
L+I PYDK+S+ IEKAI++++LG+ P +DGEVIR+++P LT ERRKEL K V K E
Sbjct: 62 RLLVISPYDKTSVDDIEKAIIAANLGVNPTSDGEVIRISVPALTEERRKELVKDVKKIGE 121
Query: 214 EGKV 217
+ KV
Sbjct: 122 DAKV 125
>gi|159036877|ref|YP_001536130.1| ribosome recycling factor [Salinispora arenicola CNS-205]
gi|189044070|sp|A8M6B4.1|RRF_SALAI RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|157915712|gb|ABV97139.1| ribosome recycling factor [Salinispora arenicola CNS-205]
Length = 185
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 81/121 (66%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+ + +MER I+ + F ++RTGR+N AM KI ++YYGSP L +A I P+ ++I
Sbjct: 8 EAEEKMERAIEHAKEEFGAIRTGRANAAMFSKIIIDYYGSPTPLPQMASIGVPEPRMVII 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
+PYD S ++EKAI SDLG+ PNN+G +R+ LPQ+T ERR+E+ KV + EE KV
Sbjct: 68 KPYDNSQTNAMEKAIRDSDLGVNPNNEGNQLRILLPQMTEERRREMIKVARHKGEEAKVA 127
Query: 219 M 219
+
Sbjct: 128 V 128
>gi|441509955|ref|ZP_20991867.1| ribosome-recycling factor [Gordonia aichiensis NBRC 108223]
gi|441445970|dbj|GAC49828.1| ribosome-recycling factor [Gordonia aichiensis NBRC 108223]
Length = 185
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 85/121 (70%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + +ME+ + + R + S+RTGR+NP+M +KI +EYYG+ + +A I TP++ ++I
Sbjct: 8 DAEEKMEKAVGVAREDMGSIRTGRANPSMFNKIHIEYYGALTPITQVASITTPEARLVVI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
+PY+ S+L+ IE AI +SDLG+ P NDG +IR+ +PQLT +RRK+L K + E+ KV
Sbjct: 68 KPYEASNLRDIETAIRNSDLGVNPTNDGNLIRVAIPQLTEDRRKDLVKQAKGKGEDAKVA 127
Query: 219 M 219
+
Sbjct: 128 I 128
>gi|329117138|ref|ZP_08245855.1| ribosome recycling factor [Streptococcus parauberis NCFD 2020]
gi|333904554|ref|YP_004478425.1| ribosome recycling factor [Streptococcus parauberis KCTC 11537]
gi|326907543|gb|EGE54457.1| ribosome recycling factor [Streptococcus parauberis NCFD 2020]
gi|333119819|gb|AEF24753.1| ribosome recycling factor [Streptococcus parauberis KCTC 11537]
gi|456370410|gb|EMF49306.1| Ribosome recycling factor [Streptococcus parauberis KRS-02109]
gi|457095994|gb|EMG26465.1| Ribosome recycling factor [Streptococcus parauberis KRS-02083]
Length = 185
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 77/105 (73%)
Query: 115 FNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIV 174
+ S+R GR+N ++LD+I+VEYYG+P L +A I P++ L+I P+DKSS+K IE+AI
Sbjct: 24 YASIRAGRANASLLDRIQVEYYGAPTPLNQLASITVPEARVLMISPFDKSSIKDIERAIN 83
Query: 175 SSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
+SDLG+TP NDG +IRL +P LT E RKEL+K V K E K+ +
Sbjct: 84 ASDLGITPANDGSIIRLVIPALTEETRKELAKEVKKVGESSKIAI 128
>gi|395242460|ref|ZP_10419457.1| Ribosome-recycling factor [Lactobacillus pasteurii CRBIP 24.76]
gi|394480192|emb|CCI85697.1| Ribosome-recycling factor [Lactobacillus pasteurii CRBIP 24.76]
Length = 187
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 87/119 (73%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K ME++I + + N S+R G +N +L+ I+V+YYG+P L ++ ++ P+ LLI P
Sbjct: 11 KENMEKSIKVFQRNLASIRAGVANAGLLEGIQVDYYGAPTPLTQMSSVSIPEPRVLLITP 70
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
YD +SL +IE A+++S+LG+TP NDG+VIRL +PQLT ERR+E++K V K+AE+ K+ +
Sbjct: 71 YDINSLDNIEHALLASNLGLTPANDGKVIRLVIPQLTGERRQEIAKQVGKEAEDAKIAV 129
>gi|433449302|ref|ZP_20412166.1| ribosome recycling factor [Weissella ceti NC36]
gi|429538816|gb|ELA06854.1| ribosome recycling factor [Weissella ceti NC36]
Length = 185
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 80/117 (68%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
RM + D ++ +R G +NP++L + V+YYG+P L +A + P+S LLI P+D
Sbjct: 12 RMGKAADALQRELGQIRAGVANPSILRPVTVDYYGAPTPLNQLASVTVPESRVLLIAPFD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
KS+LK IE+AI +SDLG+TP NDG VIRL +P LT E RKEL+K V +AE+ KV +
Sbjct: 72 KSALKDIEQAIFASDLGLTPANDGTVIRLVIPALTEETRKELAKDVKAEAEKSKVAV 128
>gi|347754098|ref|YP_004861662.1| ribosome recycling factor [Candidatus Chloracidobacterium
thermophilum B]
gi|347586616|gb|AEP11146.1| ribosome recycling factor [Candidatus Chloracidobacterium
thermophilum B]
Length = 186
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 89/122 (72%)
Query: 95 SIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSS 154
I K+ ARME T++ R F+S+RTGR++ +LD I+VE YG+ + L +A I+ P+++
Sbjct: 5 DILKEATARMETTLEDARRRFSSIRTGRASVNLLDGIQVESYGTVMPLNQLANISAPEAA 64
Query: 155 SLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEE 214
+ IQP+D S L +IE+AI SSDLG+TP+NDG++IRL +P LT ERRK+L++ V AEE
Sbjct: 65 LITIQPWDTSLLGAIERAIQSSDLGITPSNDGKIIRLPIPPLTEERRKQLARTVRDTAEE 124
Query: 215 GK 216
+
Sbjct: 125 HR 126
>gi|219130047|ref|XP_002185186.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403365|gb|EEC43318.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 173
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 80/114 (70%)
Query: 104 MERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDK 163
M +++D VR N SVRTGR++ +LD+++V+YYG L +A I+ P + L I PYDK
Sbjct: 1 MAKSVDSVRLNLQSVRTGRASAQILDRVKVDYYGVETPLNQMATISVPSAQQLSIDPYDK 60
Query: 164 SSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
+SL +IE AIV SDLG+T NNDG +IR+ +P +T +RRKE+ K+ EEGKV
Sbjct: 61 TSLNNIETAIVESDLGLTTNNDGSIIRINIPSMTEDRRKEMLKLCKSIGEEGKV 114
>gi|381180834|ref|ZP_09889671.1| ribosome recycling factor [Treponema saccharophilum DSM 2985]
gi|380767190|gb|EIC01192.1| ribosome recycling factor [Treponema saccharophilum DSM 2985]
Length = 180
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 57/121 (47%), Positives = 85/121 (70%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D ARME++I + N++RTGR++ A+ DK+ V+YYG+ L +A I+ PD+ S+LI
Sbjct: 4 DASARMEKSIASFKDALNTIRTGRASAAIFDKVRVDYYGNKSPLNQVANISIPDARSVLI 63
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
P+DKS + IEKAI+ +DLG+ P+NDG+VIR+ +P LT++RRKEL K AE+ K
Sbjct: 64 APFDKSLITEIEKAILVADLGLNPSNDGKVIRIAIPALTADRRKELVKQAKMLAEQYKTA 123
Query: 219 M 219
+
Sbjct: 124 I 124
>gi|271963401|ref|YP_003337597.1| ribosome recycling factor [Streptosporangium roseum DSM 43021]
gi|270506576|gb|ACZ84854.1| ribosome recycling factor [Streptosporangium roseum DSM 43021]
Length = 185
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 82/115 (71%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M++ + + + +F +RTGR P+M +KI EYYG+P ++ +A + P++ ++IQP+D
Sbjct: 12 KMDKAVSVAKDDFAGIRTGRVTPSMFNKISAEYYGTPTPIQQLASFHVPEARMVIIQPFD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
K S+ +IEKAI +SDLG+ P NDG+VIR+ P+L+ ERR+E KV +AE+ KV
Sbjct: 72 KGSMAAIEKAIRNSDLGVNPGNDGQVIRVAFPELSEERRREYIKVARNKAEQSKV 126
>gi|386714365|ref|YP_006180688.1| ribosome recycling factor [Halobacillus halophilus DSM 2266]
gi|384073921|emb|CCG45414.1| ribosome recycling factor [Halobacillus halophilus DSM 2266]
Length = 185
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 80/115 (69%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+ME+ + +VR GR+NPA+LD + V+YYG+ L +AQ+ P+ L+I PYD
Sbjct: 12 QMEQAVQAFSRQLATVRAGRANPAILDNVYVDYYGAATPLNQLAQVGAPEPRLLVITPYD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
KS++ IEKAI +DLG++P++DG V+R+ +P LT ERRK+L+KVV K EE KV
Sbjct: 72 KSAIAEIEKAIQKADLGLSPSSDGNVVRINIPSLTEERRKDLAKVVGKYTEEAKV 126
>gi|145593876|ref|YP_001158173.1| ribosome recycling factor [Salinispora tropica CNB-440]
gi|189044073|sp|A4X4J5.1|RRF_SALTO RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|145303213|gb|ABP53795.1| ribosome recycling factor [Salinispora tropica CNB-440]
Length = 185
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 81/121 (66%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+ + +MER I+ + F ++RTGR+N AM KI ++YYGSP L +A I P+ ++I
Sbjct: 8 EAEEKMERAIEHAKEEFGAIRTGRANAAMFSKIVIDYYGSPTPLPQMASIGVPEPRMVII 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
+PYD S ++EKAI SDLG+ PNN+G +R+ LPQ+T ERR+E+ KV + EE KV
Sbjct: 68 KPYDTSQTNAMEKAIRDSDLGVNPNNEGNQLRILLPQMTEERRREMIKVARHKGEEAKVA 127
Query: 219 M 219
+
Sbjct: 128 V 128
>gi|451818154|ref|YP_007454355.1| ribosome-recycling factor Frr [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451784133|gb|AGF55101.1| ribosome-recycling factor Frr [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 185
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 88/125 (70%)
Query: 95 SIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSS 154
I K+ + +M +TI +++++ ++++ GR+NP MLD+I+V+YYGS L +A ++ P+
Sbjct: 4 DIIKNAEEKMNKTISVLKSDLSTMKAGRANPTMLDRIQVDYYGSMCPLTQVANVSAPEPR 63
Query: 155 SLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEE 214
L+I P++K LK IEKAI+ SDLG+ P+NDG +IRL +P+LT E RK L K V K EE
Sbjct: 64 VLMITPWEKPLLKEIEKAILKSDLGLNPSNDGAIIRLVVPELTEETRKTLVKNVKKTGEE 123
Query: 215 GKVVM 219
KV +
Sbjct: 124 AKVAV 128
>gi|260101372|ref|ZP_05751609.1| ribosome recycling factor [Lactobacillus helveticus DSM 20075]
gi|417008687|ref|ZP_11945684.1| ribosome recycling factor [Lactobacillus helveticus MTCC 5463]
gi|260084824|gb|EEW68944.1| ribosome recycling factor [Lactobacillus helveticus DSM 20075]
gi|328465732|gb|EGF36936.1| ribosome recycling factor [Lactobacillus helveticus MTCC 5463]
Length = 185
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 86/122 (70%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K + M+++I + + S+R G +N A+LD ++VEYYG+P L ++ I P+ LL
Sbjct: 7 KKAQDNMDKSIKVYQKRLASIRAGVANAALLDNVQVEYYGAPTPLTQMSSITIPEPRVLL 66
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
I PYD++SL IE A+++S+LG+TP NDG+VIRL +PQLT ERR+E++K V K AE+ K+
Sbjct: 67 ITPYDQNSLDDIEHALLASNLGLTPANDGKVIRLVIPQLTGERREEIAKEVGKYAEDAKI 126
Query: 218 VM 219
+
Sbjct: 127 AV 128
>gi|422325350|ref|ZP_16406386.1| ribosome-recycling factor [Rothia mucilaginosa M508]
gi|353343354|gb|EHB87672.1| ribosome-recycling factor [Rothia mucilaginosa M508]
Length = 185
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/132 (44%), Positives = 87/132 (65%), Gaps = 7/132 (5%)
Query: 86 IEEIEAEKSSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSI 145
IEEI AE +ME+TI+ +T F VRTGR NPA+ + EYYG+P L+ +
Sbjct: 2 IEEILAEAGE-------KMEKTIEATKTEFAKVRTGRVNPAIFSGLTAEYYGAPTPLQQL 54
Query: 146 AQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELS 205
N D+ ++ I P+D ++L +IEKA+ SDLG+ P+NDG IR+ +P++T+ERRKE +
Sbjct: 55 VSFNVEDARTVKIVPFDVTALAAIEKALRDSDLGVNPSNDGAAIRVVMPEMTAERRKEYT 114
Query: 206 KVVAKQAEEGKV 217
K+V +AEE +V
Sbjct: 115 KLVNHKAEESRV 126
>gi|161507690|ref|YP_001577644.1| ribosome recycling factor [Lactobacillus helveticus DPC 4571]
gi|385813612|ref|YP_005850005.1| Ribosome-recycling factor [Lactobacillus helveticus H10]
gi|403514827|ref|YP_006655647.1| ribosome recycling factor [Lactobacillus helveticus R0052]
gi|172048311|sp|A8YVR6.1|RRF_LACH4 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|160348679|gb|ABX27353.1| ribosome recycling factor Rrf [Lactobacillus helveticus DPC 4571]
gi|323466331|gb|ADX70018.1| Ribosome-recycling factor [Lactobacillus helveticus H10]
gi|403080265|gb|AFR21843.1| ribosome recycling factor [Lactobacillus helveticus R0052]
Length = 185
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 86/122 (70%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K + M+++I + + S+R G +N A+LD ++VEYYG+P L ++ I P+ LL
Sbjct: 7 KKAQDNMDKSIKVYQKRLASIRAGVANAALLDNVQVEYYGAPTPLTQMSSITIPEPRVLL 66
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
I PYD++SL IE A+++S+LG+TP NDG+VIRL +PQLT ERR+E++K V K AE+ K+
Sbjct: 67 ITPYDQNSLDDIEHALLASNLGLTPANDGKVIRLVIPQLTGERREEIAKEVGKYAEDAKI 126
Query: 218 VM 219
+
Sbjct: 127 AV 128
>gi|357238187|ref|ZP_09125524.1| ribosome recycling factor [Streptococcus ictaluri 707-05]
gi|356752910|gb|EHI70031.1| ribosome recycling factor [Streptococcus ictaluri 707-05]
Length = 185
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 56/103 (54%), Positives = 76/103 (73%)
Query: 115 FNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIV 174
+ S+R GR+N ++LD+I+VEYYG+P L +A I P++ LLI P+DKSS+K IE+A+
Sbjct: 24 YASIRAGRANASLLDRIKVEYYGAPTPLNQLASITVPEARVLLISPFDKSSIKDIERALN 83
Query: 175 SSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
+SDLG+TP NDG VIRL +P LT E RKEL+K V K E K+
Sbjct: 84 ASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGENAKI 126
>gi|422344147|ref|ZP_16425074.1| ribosome recycling factor [Selenomonas noxia F0398]
gi|355377665|gb|EHG24879.1| ribosome recycling factor [Selenomonas noxia F0398]
Length = 185
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 81/116 (69%)
Query: 104 MERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDK 163
M + ID++R F+S+R GR+ P +LDK+ V YYG+P S+ +A++ P+ ++I P++K
Sbjct: 13 MNKAIDVLRREFSSLRAGRATPNLLDKVMVPYYGTPTSVNQLAKVMVPEPHMIVITPWEK 72
Query: 164 SSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
L IE AI SDLG++PN+DG VIRL +PQ T ERRKEL K V K+ EE KV +
Sbjct: 73 EILHDIEIAISKSDLGLSPNSDGTVIRLAVPQPTQERRKELIKTVGKKTEEAKVAL 128
>gi|333919252|ref|YP_004492833.1| ribosome-recycling factor [Amycolicicoccus subflavus DQS3-9A1]
gi|333481473|gb|AEF40033.1| Ribosome-recycling factor [Amycolicicoccus subflavus DQS3-9A1]
Length = 185
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 83/121 (68%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + +ME+ + + + S+RTGR+NP M +I ++YYG+P + +A IN P++ ++I
Sbjct: 8 DAEEKMEKAVSVAKDELGSIRTGRANPGMFSRIVIDYYGAPTPITQLASINVPEARLVVI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
+PYD S L +IE AI +SDLG+ P NDG +IR+ +PQLT ERR++L+K + E+ +V
Sbjct: 68 KPYDTSQLSAIETAIRNSDLGVNPGNDGAIIRIAVPQLTEERRRDLAKQARSKGEDARVA 127
Query: 219 M 219
+
Sbjct: 128 V 128
>gi|71903032|ref|YP_279835.1| ribosome recycling factor [Streptococcus pyogenes MGAS6180]
gi|123640384|sp|Q48UX6.1|RRF_STRPM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|71802127|gb|AAX71480.1| ribosome recycling factor [Streptococcus pyogenes MGAS6180]
Length = 185
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 77/105 (73%)
Query: 115 FNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIV 174
+ S+R GR+N ++LD+I+V+YYG+P L +A I P++ LLI P+DKSS+K IE+A+
Sbjct: 24 YASIRAGRANASLLDRIQVDYYGAPTPLNQLASITVPEARVLLISPFDKSSIKDIERALN 83
Query: 175 SSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
+SDLG+TP NDG VIRL +P LT E RKEL+K V K E K+ +
Sbjct: 84 ASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGENAKIAI 128
>gi|325295600|ref|YP_004282114.1| ribosome-recycling factor [Desulfurobacterium thermolithotrophum
DSM 11699]
gi|325066048|gb|ADY74055.1| Ribosome-recycling factor [Desulfurobacterium thermolithotrophum
DSM 11699]
Length = 185
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 87/122 (71%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
KD RM++ +++++T+F +RTGR++ +++ I+V+YYGS +++K IAQI P+ + +
Sbjct: 7 KDADNRMKKAVEVLKTDFAGLRTGRASTVLVEDIKVDYYGSIMTIKQIAQIAVPEPTQIT 66
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
IQP+D S + +IEKAI SDLG+ P DG +IR+ LP LT ERRKEL K K AE+ K+
Sbjct: 67 IQPWDVSVIPNIEKAIRESDLGVQPQRDGNIIRINLPPLTEERRKELVKKAGKMAEQAKI 126
Query: 218 VM 219
+
Sbjct: 127 AI 128
>gi|291544887|emb|CBL17996.1| ribosome recycling factor [Ruminococcus champanellensis 18P13]
Length = 184
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 83/117 (70%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M++ + + F S+R GR+NP +LDK+ V+YYG+P + +A + ++ LLIQP+D
Sbjct: 11 KMDKALQHLAAEFASIRAGRANPGILDKVTVDYYGTPTPVNQMAAVTVSEARILLIQPWD 70
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
S +K+I KA+++SD+G+TP +DG+VIRL PQLT +RRKE+ K + K +E KV +
Sbjct: 71 ASMIKAINKALLASDIGITPTDDGKVIRLVFPQLTEDRRKEICKSIKKYGDETKVAV 127
>gi|251781912|ref|YP_002996214.1| ribosome recycling factor [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|386316441|ref|YP_006012605.1| ribosome recycling factor [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
gi|410494230|ref|YP_006904076.1| ribosome-recycling factor [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
gi|417751597|ref|ZP_12399880.1| ribosome recycling factor [Streptococcus dysgalactiae subsp.
equisimilis SK1249]
gi|417928656|ref|ZP_12572044.1| ribosome recycling factor [Streptococcus dysgalactiae subsp.
equisimilis SK1250]
gi|242390541|dbj|BAH81000.1| ribosome releasing factor [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|323126728|gb|ADX24025.1| ribosome recycling factor [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
gi|333772652|gb|EGL49482.1| ribosome recycling factor [Streptococcus dysgalactiae subsp.
equisimilis SK1249]
gi|340766530|gb|EGR89056.1| ribosome recycling factor [Streptococcus dysgalactiae subsp.
equisimilis SK1250]
gi|410439390|emb|CCI62018.1| Ribosome-recycling factor [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
Length = 185
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 77/105 (73%)
Query: 115 FNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIV 174
+ S+R GR+N ++LD+I+V+YYG+P L +A I P++ LLI P+DKSS+K IE+A+
Sbjct: 24 YASIRAGRANASLLDRIQVDYYGAPTPLNQLASITVPEARVLLISPFDKSSIKDIERALN 83
Query: 175 SSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
+SDLG+TP NDG VIRL +P LT E RKEL+K V K E K+ +
Sbjct: 84 ASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGENAKIAI 128
>gi|302392360|ref|YP_003828180.1| ribosome recycling factor [Acetohalobium arabaticum DSM 5501]
gi|302204437|gb|ADL13115.1| ribosome recycling factor [Acetohalobium arabaticum DSM 5501]
Length = 185
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 86/123 (69%)
Query: 95 SIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSS 154
+EK + +ME ID V+ +F+ +RTGR+ P++++ I +YYG+ + +A+++ P+
Sbjct: 4 QVEKKTQQKMEEVIDEVKDDFDQIRTGRAKPSLIEGITADYYGTKTPINQMAKVSAPEPR 63
Query: 155 SLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEE 214
L+IQP+D L+ IEKAI+ SDL ++PNNDGEVIR+ +P+LT E+RKE + +AEE
Sbjct: 64 QLVIQPWDDGVLEDIEKAIMKSDLDLSPNNDGEVIRINIPKLTEEKRKEYVSLANDKAEE 123
Query: 215 GKV 217
++
Sbjct: 124 HRI 126
>gi|320450765|ref|YP_004202861.1| ribosome recycling factor [Thermus scotoductus SA-01]
gi|320150934|gb|ADW22312.1| ribosome recycling factor [Thermus scotoductus SA-01]
Length = 185
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 85/121 (70%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+ +A M+++++ + N +RTGR+NPA+L ++VEYYG+ V L IA + PD+ +L++
Sbjct: 9 ETRAHMQKSLEALEHNLAGLRTGRANPALLLHLKVEYYGTHVPLNQIATVTAPDAKTLVV 68
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
Q +D+++LK+IEKAI SDLG+ P N G+ + + +P LT ERRKEL K AEEG++
Sbjct: 69 QSWDQNALKAIEKAIRDSDLGLNPANKGDALYINIPPLTEERRKELVKTARHYAEEGRIA 128
Query: 219 M 219
+
Sbjct: 129 I 129
>gi|145295926|ref|YP_001138747.1| ribosome recycling factor [Corynebacterium glutamicum R]
gi|417971675|ref|ZP_12612598.1| ribosome recycling factor [Corynebacterium glutamicum S9114]
gi|166230782|sp|A4QF29.1|RRF_CORGB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|140845846|dbj|BAF54845.1| hypothetical protein [Corynebacterium glutamicum R]
gi|344044157|gb|EGV39838.1| ribosome recycling factor [Corynebacterium glutamicum S9114]
Length = 185
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 85/121 (70%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+ + RM T++ R + ++RTGR+NPAM + + EYYG P + ++ I+ P+ LLI
Sbjct: 8 EAEERMTATVEHTREDLTTIRTGRANPAMFNGVMAEYYGVPTPITQMSSISVPEPRMLLI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
+PY+ SS++ IE AI +SDLG+ P NDG+V+R+T+PQLT ERRK++ K+ + E+GK+
Sbjct: 68 KPYEMSSMQVIENAIRNSDLGVNPTNDGQVLRVTIPQLTEERRKDMVKLAKGKGEDGKIA 127
Query: 219 M 219
+
Sbjct: 128 I 128
>gi|333983345|ref|YP_004512555.1| Ribosome-recycling factor [Methylomonas methanica MC09]
gi|333807386|gb|AEG00056.1| Ribosome-recycling factor [Methylomonas methanica MC09]
Length = 185
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 56/124 (45%), Positives = 88/124 (70%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
S I++D ARM ++I+ ++ F +RTGR++P++LD+I V YYGS L +A ++ D+
Sbjct: 3 SDIQQDAAARMAKSIEALQKAFTKIRTGRAHPSLLDQISVSYYGSESQLSQVANVSVEDA 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
+L + P++K +++IEKAI+SS LG+ P G VIR+ LP LT ERR++L KVV +AE
Sbjct: 63 RTLKVVPWEKGMVQAIEKAILSSGLGLNPATQGTVIRIPLPALTEERRRDLVKVVKSEAE 122
Query: 214 EGKV 217
+G+V
Sbjct: 123 QGRV 126
>gi|334128441|ref|ZP_08502332.1| ribosome recycling factor [Centipeda periodontii DSM 2778]
gi|333387417|gb|EGK58614.1| ribosome recycling factor [Centipeda periodontii DSM 2778]
Length = 185
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 83/119 (69%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
+A M + I+ +R F+S+R GR+ P +LDK+ V YYG+P S+ +A++ P+ ++I P
Sbjct: 10 EASMNKAIEALRREFSSLRAGRATPNLLDKVMVPYYGTPTSVNQLAKVTVPEPHMIVITP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
++KS L IE AI SDLG++PN+DG VIRL +PQ T ERRKEL K V K+ E+ KV +
Sbjct: 70 WEKSILHEIEIAISKSDLGLSPNSDGTVIRLAIPQPTQERRKELIKTVGKKTEDAKVAL 128
>gi|70726656|ref|YP_253570.1| ribosome recycling factor [Staphylococcus haemolyticus JCSC1435]
gi|123660049|sp|Q4L5W1.1|RRF_STAHJ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|68447380|dbj|BAE04964.1| ribosome recycling factor [Staphylococcus haemolyticus JCSC1435]
Length = 184
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 60/124 (48%), Positives = 86/124 (69%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
S I +D KARM ++ID + ++ GR+N +L + V+YYG+P ++ +A IN P++
Sbjct: 2 SDIIQDTKARMSKSIDNLSRELANISAGRANSNLLSGVTVDYYGAPTPVQQLASINVPEA 61
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
L+I PYDKSS+ IEKAI +++LG+ P +DGEVIR+T+P LT ERRKEL K V K E
Sbjct: 62 RLLVISPYDKSSVADIEKAIYAANLGVNPTSDGEVIRITVPALTEERRKELVKNVKKIGE 121
Query: 214 EGKV 217
+ KV
Sbjct: 122 DAKV 125
>gi|407793383|ref|ZP_11140417.1| ribosome recycling factor [Idiomarina xiamenensis 10-D-4]
gi|407215006|gb|EKE84847.1| ribosome recycling factor [Idiomarina xiamenensis 10-D-4]
Length = 185
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 60/126 (47%), Positives = 88/126 (69%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+ I KD K+RME++++ +R VRTGR++P++LD I V YYG+ L+ +A I T DS
Sbjct: 3 NDIIKDAKSRMEKSVEALRGQMAKVRTGRAHPSLLDGITVNYYGTETPLRQLANITTEDS 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
+L + +DKSS ++EKAI+ SDLG+ P G VIR+ LP LT ERR++L KVV +AE
Sbjct: 63 RTLALTVFDKSSSGAVEKAIMQSDLGLNPAAAGAVIRVPLPPLTEERRRDLVKVVRAEAE 122
Query: 214 EGKVVM 219
+G+V +
Sbjct: 123 QGRVAV 128
>gi|238854749|ref|ZP_04645079.1| ribosome recycling factor [Lactobacillus jensenii 269-3]
gi|260663981|ref|ZP_05864834.1| ribosome recycling factor [Lactobacillus jensenii SJ-7A-US]
gi|313472270|ref|ZP_07812762.1| ribosome recycling factor [Lactobacillus jensenii 1153]
gi|238832539|gb|EEQ24846.1| ribosome recycling factor [Lactobacillus jensenii 269-3]
gi|239529668|gb|EEQ68669.1| ribosome recycling factor [Lactobacillus jensenii 1153]
gi|260561867|gb|EEX27836.1| ribosome recycling factor [Lactobacillus jensenii SJ-7A-US]
Length = 185
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 85/119 (71%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K M ++I + + ++R G +N ++L+ ++V+YYG P L ++ + P++ LL+ P
Sbjct: 10 KENMNKSIAVYQKELGNIRAGVANASLLEGVKVDYYGVPTPLTQMSSVTIPEARVLLVTP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
YDKSSL +IE A+++SDLG+TP NDG VIRL +PQLT ERR+E++K V KQAE+ K+ +
Sbjct: 70 YDKSSLDNIEHALLASDLGLTPANDGNVIRLVIPQLTGERREEIAKQVGKQAEQAKIAI 128
>gi|290890488|ref|ZP_06553563.1| hypothetical protein AWRIB429_0953 [Oenococcus oeni AWRIB429]
gi|419758844|ref|ZP_14285156.1| ribosome recycling factor [Oenococcus oeni AWRIB304]
gi|419857751|ref|ZP_14380454.1| ribosome recycling factor [Oenococcus oeni AWRIB202]
gi|421185407|ref|ZP_15642818.1| ribosome recycling factor [Oenococcus oeni AWRIB318]
gi|421195347|ref|ZP_15652555.1| ribosome recycling factor [Oenococcus oeni AWRIB568]
gi|421197460|ref|ZP_15654635.1| ribosome recycling factor [Oenococcus oeni AWRIB576]
gi|290479884|gb|EFD88533.1| hypothetical protein AWRIB429_0953 [Oenococcus oeni AWRIB429]
gi|399904299|gb|EJN91755.1| ribosome recycling factor [Oenococcus oeni AWRIB304]
gi|399964588|gb|EJN99229.1| ribosome recycling factor [Oenococcus oeni AWRIB318]
gi|399975069|gb|EJO09137.1| ribosome recycling factor [Oenococcus oeni AWRIB576]
gi|399975772|gb|EJO09807.1| ribosome recycling factor [Oenococcus oeni AWRIB568]
gi|410497222|gb|EKP88697.1| ribosome recycling factor [Oenococcus oeni AWRIB202]
Length = 180
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 57/109 (52%), Positives = 78/109 (71%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K+VK RM + + ++R GR+NP +L+KI+VEYYG+P L +A + P++ LL
Sbjct: 5 KEVKERMGKVSKAFQNELINIRAGRANPNILNKIQVEYYGTPTPLNQLASVQIPEARVLL 64
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSK 206
I PYDK+SLK+IE+AI +SDLG+TP NDG IRL +PQLT + RKEL K
Sbjct: 65 ITPYDKTSLKAIEQAIFASDLGLTPQNDGSAIRLIIPQLTEDSRKELVK 113
>gi|421186345|ref|ZP_15643738.1| ribosome recycling factor [Oenococcus oeni AWRIB418]
gi|399967298|gb|EJO01780.1| ribosome recycling factor [Oenococcus oeni AWRIB418]
Length = 180
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 57/109 (52%), Positives = 78/109 (71%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K+VK RM + + ++R GR+NP +L+KI+VEYYG+P L +A + P++ LL
Sbjct: 5 KEVKERMGKVSKAFQNELINIRAGRANPNILNKIQVEYYGAPTPLNQLASVQIPEARVLL 64
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSK 206
I PYDK+SLK+IE+AI +SDLG+TP NDG IRL +PQLT + RKEL K
Sbjct: 65 ITPYDKTSLKAIEQAIFASDLGLTPQNDGSAIRLIIPQLTEDSRKELVK 113
>gi|116491008|ref|YP_810552.1| ribosome recycling factor [Oenococcus oeni PSU-1]
gi|118586854|ref|ZP_01544288.1| ribosome recycling factor [Oenococcus oeni ATCC BAA-1163]
gi|419859540|ref|ZP_14382194.1| ribosome recycling factor [Oenococcus oeni DSM 20252 = AWRIB129]
gi|421188887|ref|ZP_15646219.1| ribosome recycling factor [Oenococcus oeni AWRIB419]
gi|421189672|ref|ZP_15646986.1| ribosome recycling factor [Oenococcus oeni AWRIB422]
gi|421190871|ref|ZP_15648155.1| ribosome recycling factor [Oenococcus oeni AWRIB548]
gi|421193613|ref|ZP_15650859.1| ribosome recycling factor [Oenococcus oeni AWRIB553]
gi|122276810|sp|Q04F85.1|RRF_OENOB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|116091733|gb|ABJ56887.1| ribosome recycling factor [Oenococcus oeni PSU-1]
gi|118432686|gb|EAV39418.1| ribosome recycling factor [Oenococcus oeni ATCC BAA-1163]
gi|399964220|gb|EJN98874.1| ribosome recycling factor [Oenococcus oeni AWRIB419]
gi|399971772|gb|EJO06011.1| ribosome recycling factor [Oenococcus oeni AWRIB553]
gi|399972762|gb|EJO06961.1| ribosome recycling factor [Oenococcus oeni AWRIB422]
gi|399973567|gb|EJO07732.1| ribosome recycling factor [Oenococcus oeni AWRIB548]
gi|410496557|gb|EKP88040.1| ribosome recycling factor [Oenococcus oeni DSM 20252 = AWRIB129]
Length = 180
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 57/109 (52%), Positives = 78/109 (71%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K+VK RM + + ++R GR+NP +L+KI+VEYYG+P L +A + P++ LL
Sbjct: 5 KEVKERMGKVSKAFQNELINIRAGRANPNILNKIQVEYYGAPTPLNQLASVQIPEARVLL 64
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSK 206
I PYDK+SLK+IE+AI +SDLG+TP NDG IRL +PQLT + RKEL K
Sbjct: 65 ITPYDKTSLKAIEQAIFASDLGLTPQNDGSAIRLIIPQLTEDSRKELVK 113
>gi|15674582|ref|NP_268756.1| ribosome recycling factor [Streptococcus pyogenes SF370]
gi|21909863|ref|NP_664131.1| ribosome recycling factor [Streptococcus pyogenes MGAS315]
gi|28896442|ref|NP_802792.1| ribosome recycling factor [Streptococcus pyogenes SSI-1]
gi|50913751|ref|YP_059723.1| ribosome recycling factor [Streptococcus pyogenes MGAS10394]
gi|71910193|ref|YP_281743.1| ribosome recycling factor [Streptococcus pyogenes MGAS5005]
gi|94988011|ref|YP_596112.1| ribosome recycling factor [Streptococcus pyogenes MGAS9429]
gi|94991895|ref|YP_599994.1| ribosome recycling factor [Streptococcus pyogenes MGAS2096]
gi|94993775|ref|YP_601873.1| ribosome recycling factor [Streptococcus pyogenes MGAS10750]
gi|139474297|ref|YP_001129013.1| ribosome recycling factor [Streptococcus pyogenes str. Manfredo]
gi|209558949|ref|YP_002285421.1| ribosome recycling factor [Streptococcus pyogenes NZ131]
gi|306827884|ref|ZP_07461152.1| ribosome recycling factor [Streptococcus pyogenes ATCC 10782]
gi|383479567|ref|YP_005388461.1| ribosome recycling factor protein Frr [Streptococcus pyogenes
MGAS15252]
gi|383493487|ref|YP_005411163.1| ribosome recycling factor protein Frr [Streptococcus pyogenes
MGAS1882]
gi|410680068|ref|YP_006932470.1| ribosome recycling factor [Streptococcus pyogenes A20]
gi|417857398|ref|ZP_12502457.1| ribosome recycling factor [Streptococcus pyogenes HKU
QMH11M0907901]
gi|421892344|ref|ZP_16323022.1| Ribosome recycling factor [Streptococcus pyogenes NS88.2]
gi|57014111|sp|P68903.1|RRF_STRP1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|57014114|sp|Q5XDH3.1|RRF_STRP6 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|166231514|sp|Q1JD58.1|RRF_STRPB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|166231515|sp|Q1JN31.1|RRF_STRPC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|166231516|sp|Q1JI77.1|RRF_STRPD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|166231517|sp|Q1J832.1|RRF_STRPF RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|166231518|sp|A2RG30.1|RRF_STRPG RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|226749943|sp|B5XK64.1|RRF_STRPZ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|342179258|sp|P0DF38.1|RRF_STRP3 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|342179259|sp|P0DF39.1|RRF_STRPQ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|13621691|gb|AAK33477.1| putative ribosome recycling factor [Streptococcus pyogenes M1 GAS]
gi|21904050|gb|AAM78934.1| putative ribosome recycling factor [Streptococcus pyogenes MGAS315]
gi|28811693|dbj|BAC64625.1| putative ribosome recycling factor [Streptococcus pyogenes SSI-1]
gi|50902825|gb|AAT86540.1| Ribosome Recycling Factor [Streptococcus pyogenes MGAS10394]
gi|71852975|gb|AAZ50998.1| ribosome recycling factor [Streptococcus pyogenes MGAS5005]
gi|94541519|gb|ABF31568.1| ribosome recycling factor (RRF) [Streptococcus pyogenes MGAS9429]
gi|94543398|gb|ABF33446.1| Ribosome Recycling Factor (RRF) [Streptococcus pyogenes MGAS10270]
gi|94545403|gb|ABF35450.1| Ribosome Recycling Factor (RRF) [Streptococcus pyogenes MGAS2096]
gi|94547283|gb|ABF37329.1| Ribosome Recycling Factor (RRF) [Streptococcus pyogenes MGAS10750]
gi|134272544|emb|CAM30809.1| ribosome recycling factor [Streptococcus pyogenes str. Manfredo]
gi|209540150|gb|ACI60726.1| Ribosome recycling factor [Streptococcus pyogenes NZ131]
gi|304429932|gb|EFM32973.1| ribosome recycling factor [Streptococcus pyogenes ATCC 10782]
gi|378927557|gb|AFC65763.1| ribosome recycling factor protein Frr [Streptococcus pyogenes
MGAS15252]
gi|378929215|gb|AFC67632.1| ribosome recycling factor protein Frr [Streptococcus pyogenes
MGAS1882]
gi|379981900|emb|CCG26744.1| Ribosome recycling factor [Streptococcus pyogenes NS88.2]
gi|387934353|gb|EIK42466.1| ribosome recycling factor [Streptococcus pyogenes HKU
QMH11M0907901]
gi|395453436|dbj|BAM29775.1| ribosome recycling factor [Streptococcus pyogenes M1 476]
gi|409692657|gb|AFV37517.1| ribosome recycling factor [Streptococcus pyogenes A20]
Length = 185
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 77/105 (73%)
Query: 115 FNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIV 174
+ S+R GR+N ++LD+I+V+YYG+P L +A I P++ LLI P+DKSS+K IE+A+
Sbjct: 24 YASIRAGRANASLLDRIQVDYYGAPTPLNQLASITVPEARVLLISPFDKSSIKDIERALN 83
Query: 175 SSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
+SDLG+TP NDG VIRL +P LT E RKEL+K V K E K+ +
Sbjct: 84 ASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGENAKIAI 128
>gi|359420941|ref|ZP_09212872.1| ribosome-recycling factor [Gordonia araii NBRC 100433]
gi|358243214|dbj|GAB10941.1| ribosome-recycling factor [Gordonia araii NBRC 100433]
Length = 185
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 86/121 (71%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + +ME+ + + + S+RTGR+NP+M +++ ++YYGSP + +A I+TP++ ++I
Sbjct: 8 DAEEKMEKAVSKAKDDMGSIRTGRANPSMFNRVVIDYYGSPTPVTQVASISTPEARLVVI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
+PY+ SSL IE AI +SDLG+ P NDG +IR+++PQLT +RRKEL K + E+ KV
Sbjct: 68 KPYEPSSLGDIETAIRNSDLGVNPTNDGNLIRVSIPQLTEDRRKELVKQAKAKGEDAKVA 127
Query: 219 M 219
+
Sbjct: 128 I 128
>gi|57234843|ref|YP_181120.1| ribosome recycling factor [Dehalococcoides ethenogenes 195]
gi|123618956|sp|Q3Z9H9.1|RRF_DEHE1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|57225291|gb|AAW40348.1| ribosome recycling factor [Dehalococcoides ethenogenes 195]
Length = 185
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 55/117 (47%), Positives = 84/117 (71%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M ++D++ + +RTGRS+PA+++ I+VEY G P + +A I PD + IQP+D
Sbjct: 12 KMAASLDVLSQELSGIRTGRSSPALVEHIKVEYAGVPTPINHLASIAAPDPRYITIQPWD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
+S L +IEKAI+ SDLG+ PNNDG +IRL +P L+ ERR+E+ K+V+K+ EE K+ M
Sbjct: 72 RSCLSAIEKAIMKSDLGLMPNNDGNIIRLNIPPLSEERRQEMIKMVSKRLEEDKIAM 128
>gi|225873898|ref|YP_002755357.1| ribosome recycling factor [Acidobacterium capsulatum ATCC 51196]
gi|225791980|gb|ACO32070.1| ribosome recycling factor [Acidobacterium capsulatum ATCC 51196]
Length = 195
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 82/115 (71%)
Query: 100 VKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQ 159
+K RM++ + +T S+RTGR++ MLD+I V+YYG+P L + Q+NTPD+ S+++Q
Sbjct: 19 LKTRMDKAVKDFQTQLTSLRTGRASVQMLDQIRVDYYGTPTPLNQVGQVNTPDAQSIVVQ 78
Query: 160 PYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEE 214
P+D S LK IE A+ +SDLG P NDG++IR+ +P +T ERR+E+ K + K EE
Sbjct: 79 PWDTSILKDIENALRTSDLGFNPQNDGKIIRIPVPPMTEERRREVVKHLNKVLEE 133
>gi|73748219|ref|YP_307458.1| ribosome recycling factor [Dehalococcoides sp. CBDB1]
gi|289432268|ref|YP_003462141.1| ribosome recycling factor [Dehalococcoides sp. GT]
gi|452203227|ref|YP_007483360.1| ribosome recycling factor [Dehalococcoides mccartyi DCMB5]
gi|452204663|ref|YP_007484792.1| ribosome recycling factor [Dehalococcoides mccartyi BTF08]
gi|123620145|sp|Q3ZZC4.1|RRF_DEHSC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|73659935|emb|CAI82542.1| ribosome recycling factor [Dehalococcoides sp. CBDB1]
gi|288945988|gb|ADC73685.1| ribosome recycling factor [Dehalococcoides sp. GT]
gi|452110286|gb|AGG06018.1| ribosome recycling factor [Dehalococcoides mccartyi DCMB5]
gi|452111719|gb|AGG07450.1| ribosome recycling factor [Dehalococcoides mccartyi BTF08]
Length = 185
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 55/117 (47%), Positives = 83/117 (70%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M ++D++ + +RTGRS+PA+++ I VEY G P + +A I+ PD + IQP+D
Sbjct: 12 KMSASLDVLLQELSGIRTGRSSPALVEHIRVEYAGVPTPINHLANISAPDPRYITIQPWD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
+S L +IEKAI+ SDLG+ PNNDG +IRL +P L+ ERR+E+ K+V K+ EE K+ M
Sbjct: 72 RSCLSAIEKAIMKSDLGLMPNNDGNIIRLNIPPLSEERRQEMIKIVNKRLEEDKIAM 128
>gi|310828069|ref|YP_003960426.1| ribosome recycling factor [Eubacterium limosum KIST612]
gi|308739803|gb|ADO37463.1| ribosome recycling factor [Eubacterium limosum KIST612]
Length = 185
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 84/117 (71%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M++ ++ + + +R GR+NP +LDK+ V+YYG+ ++ +A + P++ + IQPYD
Sbjct: 12 KMQKALNNLNESLGGLRAGRANPHILDKVTVDYYGAATAINQLASVAVPEARMITIQPYD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
+S+ +IEKAI+++DLG P+NDG++IRL +P+LT ERRKEL K+ K EE KV M
Sbjct: 72 STSISAIEKAILTADLGFNPSNDGKIIRLIVPELTEERRKELVKLTKKYGEECKVAM 128
>gi|357636520|ref|ZP_09134395.1| ribosome recycling factor [Streptococcus macacae NCTC 11558]
gi|357584974|gb|EHJ52177.1| ribosome recycling factor [Streptococcus macacae NCTC 11558]
Length = 185
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 64/124 (51%), Positives = 83/124 (66%), Gaps = 1/124 (0%)
Query: 96 IEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSS 155
IEK K R E++ + F S+R GR+N A+LD+IEVEYYG L +A I+ P++
Sbjct: 6 IEK-AKERFEQSHQSLGREFASIRAGRANAALLDRIEVEYYGVLTPLNQLASISVPEARV 64
Query: 156 LLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEG 215
LLI P+DKSSLK IE AI +SDLG+ P NDG VIRL +P LT E R++L+K V K E
Sbjct: 65 LLISPFDKSSLKDIEHAINASDLGINPANDGSVIRLVIPALTEETRRDLAKEVKKVGESA 124
Query: 216 KVVM 219
KV +
Sbjct: 125 KVAI 128
>gi|255327231|ref|ZP_05368305.1| ribosome recycling factor [Rothia mucilaginosa ATCC 25296]
gi|255295511|gb|EET74854.1| ribosome recycling factor [Rothia mucilaginosa ATCC 25296]
Length = 185
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 59/132 (44%), Positives = 87/132 (65%), Gaps = 7/132 (5%)
Query: 86 IEEIEAEKSSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSI 145
IEEI AE +ME+TI+ +T F VRTGR NPA+ + EYYG+P L+ +
Sbjct: 2 IEEILAEAGE-------KMEKTIEATKTEFAKVRTGRVNPAIFSGLTAEYYGAPTPLQQL 54
Query: 146 AQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELS 205
N D+ ++ I P+D ++L +IEKA+ SDLG+ P+NDG IR+ +P++T+ERRKE +
Sbjct: 55 VSFNVEDARTVKIVPFDVTALAAIEKALRDSDLGVNPSNDGAAIRVVMPEMTAERRKEYT 114
Query: 206 KVVAKQAEEGKV 217
K+V +AEE +V
Sbjct: 115 KLVNSKAEESRV 126
>gi|194015089|ref|ZP_03053706.1| ribosome recycling factor [Bacillus pumilus ATCC 7061]
gi|194014115|gb|EDW23680.1| ribosome recycling factor [Bacillus pumilus ATCC 7061]
Length = 185
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 58/119 (48%), Positives = 81/119 (68%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K +ME+ + +VR GR+N ++LDK+ V+YYG+ L IA I P++ L+I P
Sbjct: 10 KEKMEKAVQAYGRELATVRAGRANASLLDKVTVDYYGAQTPLNQIASITVPEARMLIITP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
YDK+++ IEK+I SDLG+TP +DG VIR+ +P LT ERRKEL KVV K +EE KV +
Sbjct: 70 YDKTAIGDIEKSIQKSDLGITPTSDGNVIRIAIPALTEERRKELVKVVRKYSEEAKVAV 128
>gi|195978553|ref|YP_002123797.1| ribosome recycling factor [Streptococcus equi subsp. zooepidemicus
MGCS10565]
gi|225868107|ref|YP_002744055.1| ribosome recycling factor [Streptococcus equi subsp. zooepidemicus]
gi|225870940|ref|YP_002746887.1| ribosome recycling factor [Streptococcus equi subsp. equi 4047]
gi|414564520|ref|YP_006043481.1| ribosome recycling factor [Streptococcus equi subsp. zooepidemicus
ATCC 35246]
gi|226749941|sp|B4U467.1|RRF_STREM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|254809531|sp|C0MBT1.1|RRF_STRE4 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|259494555|sp|C0MCC9.1|RRF_STRS7 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|195975258|gb|ACG62784.1| ribosome recycling factor Frr [Streptococcus equi subsp.
zooepidemicus MGCS10565]
gi|225700344|emb|CAW94656.1| ribosome recycling factor [Streptococcus equi subsp. equi 4047]
gi|225701383|emb|CAW98452.1| ribosome recycling factor [Streptococcus equi subsp. zooepidemicus]
gi|338847585|gb|AEJ25797.1| ribosome recycling factor [Streptococcus equi subsp. zooepidemicus
ATCC 35246]
Length = 185
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 56/103 (54%), Positives = 76/103 (73%)
Query: 115 FNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIV 174
+ S+R GR+N ++LD+I+V+YYG+P L +A I P++ LLI P+DKSS+K IE+A+
Sbjct: 24 YASIRAGRANASLLDRIQVDYYGAPTPLNQLASITVPEARVLLISPFDKSSIKDIERALN 83
Query: 175 SSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
+SDLG+TP NDG VIRL +P LT E RKEL+K V K E KV
Sbjct: 84 ASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGETAKV 126
>gi|19553226|ref|NP_601228.1| ribosome recycling factor [Corynebacterium glutamicum ATCC 13032]
gi|62390862|ref|YP_226264.1| ribosome recycling factor [Corynebacterium glutamicum ATCC 13032]
gi|24418653|sp|Q8NP03.1|RRF_CORGL RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|21324793|dbj|BAB99416.1| Ribosome recycling factor [Corynebacterium glutamicum ATCC 13032]
gi|41326201|emb|CAF20363.1| RIBOSOME RECYCLING FACTOR [Corynebacterium glutamicum ATCC 13032]
gi|385144128|emb|CCH25167.1| ribosome releasing factor [Corynebacterium glutamicum K051]
Length = 185
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 84/121 (69%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+ + RM T++ R + ++RTGR+NPAM + + EYYG P + ++ I P+ LLI
Sbjct: 8 EAEERMTATVEHTREDLTTIRTGRANPAMFNGVMAEYYGVPTPITQMSGITVPEPRMLLI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
+PY+ SS++ IE AI +SDLG+ P NDG+V+R+T+PQLT ERRK++ K+ + E+GK+
Sbjct: 68 KPYEMSSMQVIENAIRNSDLGVNPTNDGQVLRVTIPQLTEERRKDMVKLAKGKGEDGKIA 127
Query: 219 M 219
+
Sbjct: 128 I 128
>gi|313677103|ref|YP_004055099.1| ribosome recycling factor [Marivirga tractuosa DSM 4126]
gi|312943801|gb|ADR22991.1| ribosome recycling factor [Marivirga tractuosa DSM 4126]
Length = 186
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 85/119 (71%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+ K ME+ I ++N +R G+++PAMLD + V+YYG+ + +A I+TPD+ S++I
Sbjct: 10 EAKELMEKAIQHTKSNLQKIRAGKASPAMLDGLMVDYYGNDTPINQVASISTPDARSIII 69
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
+P++K+ + IE+AI++SDLG TP NDGE++R+ +P LT ERR L+K +AE+GK+
Sbjct: 70 KPWEKNIIGEIERAIINSDLGFTPQNDGEIVRINIPPLTEERRISLTKQAKNEAEDGKI 128
>gi|261344733|ref|ZP_05972377.1| ribosome recycling factor [Providencia rustigianii DSM 4541]
gi|282567175|gb|EFB72710.1| ribosome recycling factor [Providencia rustigianii DSM 4541]
Length = 185
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 92/126 (73%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+ I+KD + RME++++ +++ + +RTGR++P++LD I VEYYGS L+ +A + DS
Sbjct: 3 NEIQKDAQDRMEKSLEALKSQISKIRTGRASPSLLDGIVVEYYGSATPLRQLANVTVEDS 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
+L I +D+S +IEKAI++SDLG+ P++ G VIR+ LP LT ERRK+L KVV +AE
Sbjct: 63 RTLAISVFDRSMSPAIEKAIMASDLGLNPSSAGTVIRVPLPALTEERRKDLIKVVRGEAE 122
Query: 214 EGKVVM 219
+G++ +
Sbjct: 123 QGRIAI 128
>gi|270307747|ref|YP_003329805.1| ribosome recycling factor [Dehalococcoides sp. VS]
gi|270153639|gb|ACZ61477.1| ribosome recycling factor [Dehalococcoides sp. VS]
Length = 185
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 83/117 (70%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M ++D++ + +RTGRS+PA+++ I VEY G P + +A I+ PD + IQP+D
Sbjct: 12 KMTASLDVLSQELSGIRTGRSSPALVEHIRVEYAGVPTPINHLAGISAPDPRYITIQPWD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
KS L +IEKAI+ SDLG+ PNNDG +IRL +P L+ ERR+E+ K+V K+ EE K+ M
Sbjct: 72 KSCLSAIEKAIMKSDLGLMPNNDGNIIRLNIPPLSEERRQEMIKMVNKRLEEDKIAM 128
>gi|19745589|ref|NP_606725.1| ribosome recycling factor [Streptococcus pyogenes MGAS8232]
gi|24418654|sp|Q8P274.1|RRF_STRP8 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|19747714|gb|AAL97224.1| putative ribosome recycling factor [Streptococcus pyogenes
MGAS8232]
Length = 185
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 77/105 (73%)
Query: 115 FNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIV 174
+ S+R GR+N ++LD+I+V+YYG+P L +A I P++ LLI P+DKSS+K IE+A+
Sbjct: 24 YASIRAGRANASLLDRIQVDYYGAPTPLNQLASITVPEARVLLISPFDKSSIKDIERALN 83
Query: 175 SSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
+SDLG+TP NDG VIRL +P LT E RKEL+K V K E K+ +
Sbjct: 84 ASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGENAKIAI 128
>gi|384431047|ref|YP_005640407.1| Ribosome-recycling factor [Thermus thermophilus SG0.5JP17-16]
gi|333966515|gb|AEG33280.1| Ribosome-recycling factor [Thermus thermophilus SG0.5JP17-16]
Length = 185
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 95/135 (70%), Gaps = 7/135 (5%)
Query: 85 TIEEIEAEKSSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKS 144
T++E+ AE ++ M+++++++ N +RTGR+NPA+L ++VEYYG+ V L
Sbjct: 2 TLKELYAE-------TRSHMQKSLEVLEHNLAGLRTGRANPALLLHLKVEYYGTHVPLNQ 54
Query: 145 IAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKEL 204
IA + PD+ +L++Q +D+++LK+IEKAI SDLG+ P+N G+ + + +P LT ERRK+L
Sbjct: 55 IATVTAPDARTLVVQSWDQNALKAIEKAIRDSDLGLNPSNKGDALYINIPPLTEERRKDL 114
Query: 205 SKVVAKQAEEGKVVM 219
+ V + AEEG+V +
Sbjct: 115 VRAVRQYAEEGRVAI 129
>gi|157692331|ref|YP_001486793.1| ribosome recycling factor [Bacillus pumilus SAFR-032]
gi|166991553|sp|A8FDB6.1|RRF_BACP2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|157681089|gb|ABV62233.1| peptide chain release factor RF4 [Bacillus pumilus SAFR-032]
Length = 185
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 58/119 (48%), Positives = 81/119 (68%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K +ME+ + +VR GR+N ++LDK+ V+YYG+ L IA I P++ L+I P
Sbjct: 10 KEKMEKAVQAYGRELATVRAGRANASLLDKVTVDYYGAQTPLNQIASITVPEARMLIITP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
YDK+++ IEK+I SDLG+TP +DG VIR+ +P LT ERRKEL KVV K +EE KV +
Sbjct: 70 YDKTAIGDIEKSIQKSDLGITPTSDGNVIRIAIPALTEERRKELVKVVRKYSEEAKVAV 128
>gi|452910810|ref|ZP_21959487.1| Ribosome recycling factor [Kocuria palustris PEL]
gi|452833982|gb|EME36786.1| Ribosome recycling factor [Kocuria palustris PEL]
Length = 185
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 82/122 (67%)
Query: 96 IEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSS 155
I + K M++ + F ++RTGR+NP++ + VEYYG+P L +A P++ +
Sbjct: 5 IHNEAKTGMDKAVAHAADEFAAIRTGRANPSLFANVTVEYYGAPTPLNQLASFQNPEART 64
Query: 156 LLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEG 215
LLI PYD+S+L IEKA+ +SD+G P NDG VIR+ +P+LT ERR++ K+V +AE+G
Sbjct: 65 LLITPYDRSALGEIEKALRNSDVGANPANDGNVIRVVMPELTEERRRDYVKIVHSKAEDG 124
Query: 216 KV 217
++
Sbjct: 125 RI 126
>gi|322831591|ref|YP_004211618.1| ribosome recycling factor [Rahnella sp. Y9602]
gi|383188841|ref|YP_005198969.1| ribosome recycling factor [Rahnella aquatilis CIP 78.65 = ATCC
33071]
gi|384256705|ref|YP_005400639.1| ribosome recycling factor [Rahnella aquatilis HX2]
gi|321166792|gb|ADW72491.1| ribosome recycling factor [Rahnella sp. Y9602]
gi|371587099|gb|AEX50829.1| ribosome recycling factor [Rahnella aquatilis CIP 78.65 = ATCC
33071]
gi|380752681|gb|AFE57072.1| ribosome recycling factor [Rahnella aquatilis HX2]
Length = 185
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 58/124 (46%), Positives = 89/124 (71%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+ I+KD + RME+ ++ +T+ + +RTGR++P +LD I VEYYGS L+ +AQ+ DS
Sbjct: 3 NEIKKDAEIRMEKCVESFKTHISKIRTGRASPGILDGIMVEYYGSATPLRQLAQVTVEDS 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
+L I +D+S ++EKAI++SDLG+ P++ G IR+ LP LT ERRK+L KVV +AE
Sbjct: 63 RTLAISVFDRSISAAVEKAIMTSDLGLNPSSAGATIRVPLPALTEERRKDLIKVVRGEAE 122
Query: 214 EGKV 217
+G+V
Sbjct: 123 QGRV 126
>gi|254448744|ref|ZP_05062201.1| ribosome recycling factor [gamma proteobacterium HTCC5015]
gi|198261585|gb|EDY85873.1| ribosome recycling factor [gamma proteobacterium HTCC5015]
Length = 185
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 93/126 (73%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+ I+KD ++RM+++++ ++ + +RTGR++P++L+ I+VEYYG+ +K +A I D+
Sbjct: 3 NDIQKDAESRMKKSLESLQGDLTRIRTGRAHPSLLEHIQVEYYGAKTPIKQVANITVEDA 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
+L++ P++K +++IEKAI+ SDLG+ P + G V+R+ LP LT ERRKE K+V ++ E
Sbjct: 63 RTLVVTPWEKDMVQTIEKAIMESDLGLNPTSAGTVMRIPLPPLTEERRKEFVKLVRQEGE 122
Query: 214 EGKVVM 219
+GKV +
Sbjct: 123 QGKVAI 128
>gi|336322318|ref|YP_004602285.1| ribosome-recycling factor [Flexistipes sinusarabici DSM 4947]
gi|336105899|gb|AEI13717.1| Ribosome-recycling factor [Flexistipes sinusarabici DSM 4947]
Length = 185
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 85/122 (69%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
KD+K +M++T++ R SVRTGR++ M D ++V YYG+P + +A + PD+ +
Sbjct: 7 KDLKKQMKKTLEHYRDELRSVRTGRASVTMFDNVKVNYYGTPTPVSQVATLQAPDARLVT 66
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
IQP+D + + IEKAI SS++G P+NDG +IR+ +PQLT ERRKE+ K+V K +EE K+
Sbjct: 67 IQPWDPNMIAEIEKAIQSSNMGFNPSNDGTIIRVPIPQLTEERRKEIMKMVKKMSEEAKI 126
Query: 218 VM 219
+
Sbjct: 127 AI 128
>gi|312143676|ref|YP_003995122.1| ribosome recycling factor [Halanaerobium hydrogeniformans]
gi|311904327|gb|ADQ14768.1| ribosome recycling factor [Halanaerobium hydrogeniformans]
Length = 185
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 93/122 (76%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K+ + RM++ ++ + + N++RTGR+ P++++ I+ YG ++ +A++ P++ ++
Sbjct: 7 KETEERMKKALEATKEDLNTIRTGRARPSLVENIKANNYGVATPIQQMAKVMAPEARQIV 66
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
I+P+DK+++++IEKAI+ +LG+ P+NDG VIR+ +PQLT ERRKEL+K++ K+AE+GK+
Sbjct: 67 IEPWDKNNIEAIEKAIMQENLGLNPSNDGNVIRINIPQLTEERRKELTKILHKKAEDGKI 126
Query: 218 VM 219
+
Sbjct: 127 AI 128
>gi|300870157|ref|YP_003785028.1| Ribosome recycling factor [Brachyspira pilosicoli 95/1000]
gi|404475508|ref|YP_006706939.1| Ribosome recycling factor [Brachyspira pilosicoli B2904]
gi|431806797|ref|YP_007233695.1| Ribosome recycling factor [Brachyspira pilosicoli P43/6/78]
gi|434382597|ref|YP_006704380.1| Ribosome recycling factor [Brachyspira pilosicoli WesB]
gi|300687856|gb|ADK30527.1| Ribosome recycling factor [Brachyspira pilosicoli 95/1000]
gi|404431246|emb|CCG57292.1| Ribosome recycling factor [Brachyspira pilosicoli WesB]
gi|404436997|gb|AFR70191.1| Ribosome recycling factor [Brachyspira pilosicoli B2904]
gi|430780156|gb|AGA65440.1| Ribosome recycling factor [Brachyspira pilosicoli P43/6/78]
Length = 182
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 85/119 (71%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K RME+ I+ ++ + +RTGR+N ++LD ++VE YGS + LK + ++TPD+ +++IQP
Sbjct: 7 KDRMEKAINSLQNDLKGIRTGRANASILDGVKVEAYGSSMPLKQVGNVSTPDAKTIMIQP 66
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
+DK+ + IEKAI+ +DLG P NDG IR+ +P+LT ERR+EL K V + EE K+ +
Sbjct: 67 FDKALVGDIEKAILKADLGFNPFNDGGNIRIMVPELTKERREELKKGVRHRGEEAKIAI 125
>gi|210615979|ref|ZP_03290879.1| hypothetical protein CLONEX_03098 [Clostridium nexile DSM 1787]
gi|210149984|gb|EEA80993.1| hypothetical protein CLONEX_03098 [Clostridium nexile DSM 1787]
Length = 185
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 55/117 (47%), Positives = 83/117 (70%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M++T+ + ++R GR+NP +LDK+ V+YYGS ++ +A I+ P++ + IQP++
Sbjct: 13 KMQKTLHSLDAELATIRAGRANPHILDKLTVDYYGSATPIQQVANISVPEARMIQIQPWE 72
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
KS +K IEKAI++SD+G+ P NDG VIRL P+LT ERRKEL K V K+ E KV +
Sbjct: 73 KSMVKEIEKAILTSDIGINPTNDGTVIRLVFPELTEERRKELVKDVKKKGEAAKVAV 129
>gi|388456528|ref|ZP_10138823.1| ribosome recycling factor [Fluoribacter dumoffii Tex-KL]
Length = 185
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 56/124 (45%), Positives = 90/124 (72%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+ I++D + RM++TI+ ++ + + VRTGR+N +LD ++V+YYG+ L +A I+ DS
Sbjct: 3 NEIKQDSEKRMKKTIEALQNDLSKVRTGRANAGLLDHVQVDYYGTITPLNQVANISASDS 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
++L+ P++KS + +IEKAI++SDLG+ P+ G IR+ +P LT ERRKEL KVV + E
Sbjct: 63 RTILVTPWEKSMVAAIEKAILTSDLGLNPSTAGSAIRVPMPPLTEERRKELIKVVRNEGE 122
Query: 214 EGKV 217
+GKV
Sbjct: 123 QGKV 126
>gi|377559580|ref|ZP_09789127.1| ribosome-recycling factor [Gordonia otitidis NBRC 100426]
gi|377523250|dbj|GAB34292.1| ribosome-recycling factor [Gordonia otitidis NBRC 100426]
Length = 185
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 85/121 (70%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + +ME+ + + R + S+RTGR+NP+M +KI +EYYG+ + +A I TP++ ++I
Sbjct: 8 DAEEKMEKAVGVAREDMGSIRTGRANPSMFNKIHIEYYGALTPITQVASITTPEARLVVI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
+PY+ S+L+ IE AI +SDLG+ P NDG +IR+ +PQLT +RRK+L K + E+ KV
Sbjct: 68 KPYEPSNLRDIETAIRNSDLGVNPTNDGNLIRVAIPQLTEDRRKDLVKQAKGKGEDAKVA 127
Query: 219 M 219
+
Sbjct: 128 I 128
>gi|325105870|ref|YP_004275524.1| ribosome recycling factor [Pedobacter saltans DSM 12145]
gi|324974718|gb|ADY53702.1| ribosome recycling factor [Pedobacter saltans DSM 12145]
Length = 187
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 54/120 (45%), Positives = 83/120 (69%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
++ KA M++ I +R G+++P+MLD + VEYYGSP L +A INTPD+ +++
Sbjct: 10 EEAKATMQKAITHTDNELMKIRAGKASPSMLDGVLVEYYGSPTPLAQVANINTPDARTIV 69
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
+QP++KS + IEK I++S+ G+ P NDG V+RL +P LT ERRK+L K ++AE GK+
Sbjct: 70 VQPWEKSMIGPIEKGILNSNCGLNPQNDGSVVRLNVPPLTEERRKQLVKQAKEEAEAGKI 129
>gi|378824167|ref|ZP_09846702.1| ribosome recycling factor [Sutterella parvirubra YIT 11816]
gi|378596997|gb|EHY30350.1| ribosome recycling factor [Sutterella parvirubra YIT 11816]
Length = 217
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 86/126 (68%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+ I K + +M RT++ +R +F +RTGR++ +LD I+V+YYG P + +AQI D+
Sbjct: 35 ADILKQAEHKMGRTVETLREDFTKIRTGRASTGLLDHIKVDYYGCPTPINQVAQIGVGDA 94
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
+L +QP++KS +K +EKAI SDLG+ P G++IR+ LP LT ERR+EL+KVV E
Sbjct: 95 HTLTVQPWEKSMIKVVEKAIRDSDLGLNPATSGDLIRVPLPPLTEERRRELTKVVRGFGE 154
Query: 214 EGKVVM 219
+ KV +
Sbjct: 155 DAKVAV 160
>gi|283458519|ref|YP_003363147.1| ribosome recycling factor [Rothia mucilaginosa DY-18]
gi|283134562|dbj|BAI65327.1| ribosome recycling factor [Rothia mucilaginosa DY-18]
Length = 203
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 58/132 (43%), Positives = 87/132 (65%), Gaps = 7/132 (5%)
Query: 86 IEEIEAEKSSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSI 145
IEEI AE +ME+TI+ +T F VRTGR NPA+ + EYYG+P L+ +
Sbjct: 20 IEEILAEAGE-------KMEKTIEATKTEFAKVRTGRVNPAIFSGLTAEYYGAPTPLQQL 72
Query: 146 AQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELS 205
N D+ ++ I P+D ++L +IEKA+ SDLG+ P+NDG IR+ +P++T+ERRKE +
Sbjct: 73 VSFNVEDARTVKIVPFDVTALAAIEKALRDSDLGVNPSNDGAAIRVVMPEMTAERRKEYT 132
Query: 206 KVVAKQAEEGKV 217
K+V +AEE ++
Sbjct: 133 KLVNHKAEEARI 144
>gi|422319091|ref|ZP_16400173.1| frr protein [Achromobacter xylosoxidans C54]
gi|317406265|gb|EFV86509.1| frr protein [Achromobacter xylosoxidans C54]
Length = 186
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 88/126 (69%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+ I K +ARM +++D ++TN +RTGR++ +LD ++VEYYGSPV + + +N D+
Sbjct: 4 AEIRKSAEARMAKSLDTLKTNLAKIRTGRAHTGILDHVQVEYYGSPVPISQVGNVNLIDA 63
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
++ +QPY+KS +IEKAI SDLG+ P + G+ IR+ +P LT ERR++L+KVV + E
Sbjct: 64 RTISVQPYEKSMAAAIEKAIRESDLGLNPMSMGDSIRVPMPALTEERRRDLTKVVRSEGE 123
Query: 214 EGKVVM 219
+ KV +
Sbjct: 124 DAKVAV 129
>gi|409997430|ref|YP_006751831.1| ribosome-recycling factor [Lactobacillus casei W56]
gi|406358442|emb|CCK22712.1| Ribosome-recycling factor [Lactobacillus casei W56]
Length = 218
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/120 (47%), Positives = 83/120 (69%)
Query: 100 VKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQ 159
K M +T + ++ ++R GR+N ++L++I VEYYG+P L +A I P+ L +
Sbjct: 9 AKVNMGKTEESLQRELGNIRAGRANASLLNQITVEYYGAPTPLNQMAAITIPEPRVLQVS 68
Query: 160 PYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
PYDKSSLK+IE A+ +SDLG+ P NDG+VIRL +PQLT ERRKE++K V K +E K+ +
Sbjct: 69 PYDKSSLKNIETALNASDLGINPANDGDVIRLVIPQLTGERRKEIAKEVGKYSESAKIAI 128
>gi|381189667|ref|ZP_09897192.1| ribosome recycling factor [Thermus sp. RL]
gi|380452244|gb|EIA39843.1| ribosome recycling factor [Thermus sp. RL]
Length = 185
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 95/135 (70%), Gaps = 7/135 (5%)
Query: 85 TIEEIEAEKSSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKS 144
T++E+ AE ++ M+++++++ N +RTGR+NPA+L ++VEYYG+ V L
Sbjct: 2 TLKELYAE-------TRSHMQKSLEVLEHNLAGLRTGRANPALLLHLKVEYYGTHVPLNQ 54
Query: 145 IAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKEL 204
IA + PD+ +L++Q +D+++LK+IEKAI SDLG+ P+N G+ + + +P LT ERRK+L
Sbjct: 55 IATVTAPDARTLVVQSWDQNALKAIEKAIRDSDLGLKPSNKGDALYINIPPLTEERRKDL 114
Query: 205 SKVVAKQAEEGKVVM 219
+ V + AEEG+V +
Sbjct: 115 VRAVRQYAEEGRVAI 129
>gi|300361909|ref|ZP_07058086.1| ribosome recycling factor [Lactobacillus gasseri JV-V03]
gi|300354528|gb|EFJ70399.1| ribosome recycling factor [Lactobacillus gasseri JV-V03]
Length = 185
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/124 (45%), Positives = 88/124 (70%), Gaps = 1/124 (0%)
Query: 96 IEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSS 155
IEK K M+++I + + +R G +N ++L+ I+V+YYG P L ++ ++ P++
Sbjct: 6 IEK-AKDNMKKSIAVFQKELGGIRAGVANASLLEGIKVDYYGVPTPLTQMSSVSIPEARV 64
Query: 156 LLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEG 215
L++ PYDKSSL IE AI++SDLG+TP NDG VIR+ +PQLT ERR+E++K V K AE+G
Sbjct: 65 LMVTPYDKSSLDDIEHAILASDLGITPANDGSVIRIVIPQLTGERRQEIAKQVGKLAEKG 124
Query: 216 KVVM 219
K+ +
Sbjct: 125 KIAV 128
>gi|315655036|ref|ZP_07907940.1| ribosome recycling factor [Mobiluncus curtisii ATCC 51333]
gi|315490692|gb|EFU80313.1| ribosome recycling factor [Mobiluncus curtisii ATCC 51333]
Length = 185
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 80/119 (67%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K K M + + + F S+RTGR+N AM D I V+YYG+P LK +A N P++ +++
Sbjct: 7 KSAKTMMAKALSATQDEFASIRTGRANTAMFDGIMVDYYGAPTPLKQLASFNIPEARTVI 66
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGK 216
+QP+DKS+ + I +AI +DLG+ P +DG+ IR+ LP LT ERRKE K+ +AEEG+
Sbjct: 67 VQPFDKSASQDIIRAIAEADLGVNPTDDGKTIRIVLPALTEERRKEYVKIAKTKAEEGR 125
>gi|298346466|ref|YP_003719153.1| ribosome recycling factor [Mobiluncus curtisii ATCC 43063]
gi|304389795|ref|ZP_07371754.1| ribosome recycling factor [Mobiluncus curtisii subsp. curtisii ATCC
35241]
gi|315657102|ref|ZP_07909986.1| ribosome recycling factor [Mobiluncus curtisii subsp. holmesii ATCC
35242]
gi|298236527|gb|ADI67659.1| ribosome recycling factor [Mobiluncus curtisii ATCC 43063]
gi|304326971|gb|EFL94210.1| ribosome recycling factor [Mobiluncus curtisii subsp. curtisii ATCC
35241]
gi|315492205|gb|EFU81812.1| ribosome recycling factor [Mobiluncus curtisii subsp. holmesii ATCC
35242]
Length = 185
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 80/119 (67%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K K M + + + F S+RTGR+N AM D I V+YYG+P LK +A N P++ +++
Sbjct: 7 KSAKTMMTKALSATQDEFASIRTGRANTAMFDGIMVDYYGAPTPLKQLASFNIPEARTVI 66
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGK 216
+QP+DKS+ + I +AI +DLG+ P +DG+ IR+ LP LT ERRKE K+ +AEEG+
Sbjct: 67 VQPFDKSASQDIIRAIAEADLGVNPTDDGKTIRIVLPALTEERRKEYVKIAKTKAEEGR 125
>gi|313679984|ref|YP_004057723.1| ribosome recycling factor [Oceanithermus profundus DSM 14977]
gi|313152699|gb|ADR36550.1| ribosome recycling factor [Oceanithermus profundus DSM 14977]
Length = 185
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 88/122 (72%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K+ + M++T+++ +N ++RTGR+NPA+L+ I+V+YYGS + L +A I+ PD+ +L+
Sbjct: 7 KETREHMQKTLEVFESNLATLRTGRANPALLEHIKVDYYGSMMPLNQLASISAPDARTLV 66
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
+Q +D+++L IEKAI SDLG+ PNN G+ + + +P LT+ERRKE+ K AEE +V
Sbjct: 67 VQAWDQNALPLIEKAIRDSDLGLNPNNQGDTLFINIPALTAERRKEIVKAAHNYAEEARV 126
Query: 218 VM 219
+
Sbjct: 127 AV 128
>gi|78356175|ref|YP_387624.1| ribosome recycling factor [Desulfovibrio alaskensis G20]
gi|123552884|sp|Q313G7.1|RRF_DESDG RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|78218580|gb|ABB37929.1| ribosome recycling factor [Desulfovibrio alaskensis G20]
Length = 184
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 83/117 (70%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
RME+ + + F +RTGR++ +++D I+V+YYG+P + +A + PDS ++ IQP+D
Sbjct: 11 RMEKAVAALDREFGRLRTGRASTSLVDSIKVDYYGTPTPINQLASVAVPDSRTITIQPWD 70
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
+ + +EKAI+ SDLG+TP NDG++IR+++P LT ERRKEL KV K E+ KV +
Sbjct: 71 RGAFALVEKAIMQSDLGLTPINDGKIIRISMPPLTEERRKELVKVAKKYTEDAKVAV 127
>gi|376294801|ref|YP_005166031.1| ribosome recycling factor [Desulfovibrio desulfuricans ND132]
gi|323457362|gb|EGB13227.1| ribosome recycling factor [Desulfovibrio desulfuricans ND132]
Length = 184
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 84/121 (69%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D K RM I + +F+ +RTGR+ A++D I V+YYG+P + ++ ++ PDS ++ I
Sbjct: 7 DGKKRMSGAITALDKDFSKLRTGRATTALVDSILVDYYGTPTPISQLSSVSVPDSKTITI 66
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QP+DK + S+EKAI +SDLG+ P NDG++IR+++P LT ERRKEL KV K E+ K+
Sbjct: 67 QPWDKGAFGSVEKAIQTSDLGLNPVNDGKIIRISIPPLTEERRKELVKVAKKYTEDAKIA 126
Query: 219 M 219
+
Sbjct: 127 I 127
>gi|149277338|ref|ZP_01883480.1| ribosome recycling factor (ribosome releasing factor) [Pedobacter
sp. BAL39]
gi|149232215|gb|EDM37592.1| ribosome recycling factor (ribosome releasing factor) [Pedobacter
sp. BAL39]
Length = 187
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 85/122 (69%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
+D +A M++ ID + +R G+++ MLD I V+YYGS L +A INTPD+ +LL
Sbjct: 10 QDAQASMDKAIDHCESELTKIRAGKASAGMLDGIFVDYYGSSTGLSQVASINTPDARTLL 69
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
+QP++K+ L IE+AI+ +++G+ P NDG VIRL +P LT ERR++L K V ++AE GK+
Sbjct: 70 VQPWEKNMLVPIERAIMEANIGINPQNDGVVIRLVVPPLTEERRRDLVKKVKEEAERGKI 129
Query: 218 VM 219
+
Sbjct: 130 TV 131
>gi|270160174|ref|ZP_06188830.1| ribosome recycling factor [Legionella longbeachae D-4968]
gi|289165053|ref|YP_003455191.1| ribosome recycling factor [Legionella longbeachae NSW150]
gi|269988513|gb|EEZ94768.1| ribosome recycling factor [Legionella longbeachae D-4968]
gi|288858226|emb|CBJ12094.1| Ribosome recycling factor [Legionella longbeachae NSW150]
Length = 185
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 56/124 (45%), Positives = 89/124 (71%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+ I++D + RM++TI+ +R + + +RTGR+N +LD ++V+YYG+ L +A + DS
Sbjct: 3 NEIKQDSERRMKKTIEALRIDMSKIRTGRANVGLLDHVQVDYYGNLTPLSQVANVTASDS 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
++L+ P++KS + +IEKAI++SDLG+ P G IR+ +P LT ERRKEL KVV +AE
Sbjct: 63 RTILVTPWEKSMVSAIEKAILTSDLGLNPATTGNAIRVPMPPLTEERRKELIKVVRNEAE 122
Query: 214 EGKV 217
+GKV
Sbjct: 123 QGKV 126
>gi|427405467|ref|ZP_18895672.1| ribosome recycling factor [Selenomonas sp. F0473]
gi|425708308|gb|EKU71347.1| ribosome recycling factor [Selenomonas sp. F0473]
Length = 185
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 81/116 (69%)
Query: 104 MERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDK 163
M + I+ +R F+S+R GR+ P +LDK+ V YYG+P S+ +A++ P+ ++I P++K
Sbjct: 13 MNKAIEALRREFSSLRAGRATPNLLDKVMVPYYGTPTSVNQLAKVTVPEPHMIVITPWEK 72
Query: 164 SSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
S L IE AI SDLG++PN+DG VIRL +PQ T ERRKEL K V K+ E+ KV +
Sbjct: 73 SVLHDIEIAISKSDLGLSPNSDGNVIRLAIPQPTQERRKELLKTVGKKTEDAKVAL 128
>gi|346224344|ref|ZP_08845486.1| Ribosome-recycling factor [Anaerophaga thermohalophila DSM 12881]
Length = 187
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 51/117 (43%), Positives = 84/117 (71%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K +M++ ID + +R G++NP MLD + VEYYG+ L+ +A INTPD ++ IQP
Sbjct: 13 KEKMQKAIDHLDHELGKIRAGKANPRMLDDVMVEYYGTMTPLQQVASINTPDPRTIAIQP 72
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
++K ++ IEKAI++++LG+ P+N+GE++R+ +P LT ERR++L K V K+ EE ++
Sbjct: 73 WEKGMIQPIEKAIMNANLGLNPDNNGEIVRINVPPLTEERRQDLVKHVKKEGEEARI 129
>gi|15603852|ref|NP_246926.1| ribosome recycling factor [Pasteurella multocida subsp. multocida
str. Pm70]
gi|378774970|ref|YP_005177213.1| ribosome-recycling factor [Pasteurella multocida 36950]
gi|386834982|ref|YP_006240299.1| ribosome recycling factor [Pasteurella multocida subsp. multocida
str. 3480]
gi|417854861|ref|ZP_12500128.1| ribosome recycling factor [Pasteurella multocida subsp. multocida
str. Anand1_goat]
gi|421264735|ref|ZP_15715701.1| ribosome recycling factor [Pasteurella multocida subsp. multocida
str. P52VAC]
gi|425064724|ref|ZP_18467849.1| Ribosome recycling factor [Pasteurella multocida subsp. gallicida
X73]
gi|425066840|ref|ZP_18469960.1| Ribosome recycling factor [Pasteurella multocida subsp. gallicida
P1059]
gi|13431830|sp|P57984.1|RRF_PASMU RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|12722427|gb|AAK04071.1| Errf [Pasteurella multocida subsp. multocida str. Pm70]
gi|338217282|gb|EGP03171.1| ribosome recycling factor [Pasteurella multocida subsp. multocida
str. Anand1_goat]
gi|356597518|gb|AET16244.1| ribosome-recycling factor [Pasteurella multocida 36950]
gi|385201685|gb|AFI46540.1| ribosome recycling factor [Pasteurella multocida subsp. multocida
str. 3480]
gi|401687847|gb|EJS83544.1| ribosome recycling factor [Pasteurella multocida subsp. multocida
str. P52VAC]
gi|404380626|gb|EJZ77116.1| Ribosome recycling factor [Pasteurella multocida subsp. gallicida
P1059]
gi|404380910|gb|EJZ77399.1| Ribosome recycling factor [Pasteurella multocida subsp. gallicida
X73]
Length = 185
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 91/126 (72%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+ I+KD + RME++++ + + VRTGR+ P++LD I+VEYYGSP L+ +A + D+
Sbjct: 3 NEIKKDTQLRMEKSLETFKNHIAKVRTGRAQPSLLDGIQVEYYGSPTPLRQLANVVAEDA 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
+L + +D+S + ++EKAI++SDLG+ P++ G IR+ LP LT ERR++L K+V +AE
Sbjct: 63 RTLAVTVFDRSLISAVEKAILTSDLGLNPSSAGTTIRVPLPPLTEERRRDLIKIVKGEAE 122
Query: 214 EGKVVM 219
+GK+ +
Sbjct: 123 QGKIAV 128
>gi|319789070|ref|YP_004150703.1| ribosome recycling factor [Thermovibrio ammonificans HB-1]
gi|317113572|gb|ADU96062.1| ribosome recycling factor [Thermovibrio ammonificans HB-1]
Length = 185
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 89/122 (72%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
KD RM++ +++++ +F +RTGR++ +++ I+V+YYGS +++K IAQI+ P+++ ++
Sbjct: 7 KDADKRMKKAVEVLKADFAGLRTGRASTVLVEDIKVDYYGSTMTIKQIAQISVPEANQIV 66
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
IQP+D S + ++EKAI SDLG+ P DG +IR+ LP LT ERRKEL K K AE+ ++
Sbjct: 67 IQPWDASVVPNVEKAIRESDLGVQPQRDGNIIRVILPPLTEERRKELVKKAGKMAEQARI 126
Query: 218 VM 219
+
Sbjct: 127 AI 128
>gi|423350176|ref|ZP_17327829.1| ribosome-recycling factor [Turicella otitidis ATCC 51513]
gi|404387847|gb|EJZ82942.1| ribosome-recycling factor [Turicella otitidis ATCC 51513]
Length = 184
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 83/121 (68%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + RM T++ R + ++RTGR+NPAM + + EYYG+ + +A I+ P+ LLI
Sbjct: 7 DCEERMSNTVEHTREDLTTIRTGRANPAMFNGVTAEYYGAETPITQMASISVPEPRMLLI 66
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
+PY+ S + +IE AI +SDLG+ P NDG V+R+T+PQLT ERRKE+ K+ + E+GK+
Sbjct: 67 KPYEPSIMDAIETAIRNSDLGVNPTNDGHVLRVTVPQLTEERRKEMVKLARSKGEDGKIA 126
Query: 219 M 219
+
Sbjct: 127 V 127
>gi|395236889|ref|ZP_10415030.1| Ribosome-recycling factor [Turicella otitidis ATCC 51513]
gi|394487922|emb|CCI83118.1| Ribosome-recycling factor [Turicella otitidis ATCC 51513]
Length = 185
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 83/121 (68%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + RM T++ R + ++RTGR+NPAM + + EYYG+ + +A I+ P+ LLI
Sbjct: 8 DCEERMSNTVEHTREDLTTIRTGRANPAMFNGVTAEYYGAETPITQMASISVPEPRMLLI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
+PY+ S + +IE AI +SDLG+ P NDG V+R+T+PQLT ERRKE+ K+ + E+GK+
Sbjct: 68 KPYEPSIMDAIETAIRNSDLGVNPTNDGHVLRVTVPQLTEERRKEMVKLARSKGEDGKIA 127
Query: 219 M 219
+
Sbjct: 128 V 128
>gi|424793702|ref|ZP_18219779.1| ribosome recycling factor [Xanthomonas translucens pv. graminis
ART-Xtg29]
gi|433678497|ref|ZP_20510349.1| ribosome recycling factor [Xanthomonas translucens pv. translucens
DSM 18974]
gi|440731286|ref|ZP_20911320.1| ribosome recycling factor [Xanthomonas translucens DAR61454]
gi|422796442|gb|EKU24948.1| ribosome recycling factor [Xanthomonas translucens pv. graminis
ART-Xtg29]
gi|430816381|emb|CCP40839.1| ribosome recycling factor [Xanthomonas translucens pv. translucens
DSM 18974]
gi|440374125|gb|ELQ10865.1| ribosome recycling factor [Xanthomonas translucens DAR61454]
Length = 185
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 87/126 (69%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+ I++D + RM ++ID +R VRTGR++ A+++ ++V YYGS + L +A + D+
Sbjct: 3 NEIKQDAQTRMAKSIDALRHTLIKVRTGRASTALVEHLKVNYYGSEMPLSQVASVAVADA 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
SL I P++K + ++EKAI++SDLG+TPN G IRL LP LT ERR+ELSKVV + E
Sbjct: 63 RSLTISPWEKQMVSAVEKAILASDLGLTPNTSGTTIRLNLPALTEERRRELSKVVHGEGE 122
Query: 214 EGKVVM 219
+ KV +
Sbjct: 123 DSKVAI 128
>gi|410088378|ref|ZP_11285073.1| Ribosome recycling factor [Morganella morganii SC01]
gi|455738090|ref|YP_007504356.1| Ribosome recycling factor [Morganella morganii subsp. morganii KT]
gi|409765300|gb|EKN49415.1| Ribosome recycling factor [Morganella morganii SC01]
gi|455419653|gb|AGG29983.1| Ribosome recycling factor [Morganella morganii subsp. morganii KT]
Length = 185
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 58/126 (46%), Positives = 91/126 (72%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+ I+KD + RME+ ++ +++ + VRTGR++P++LD I VEYYG+P L+ +A + DS
Sbjct: 3 NEIQKDAQERMEKCVESLKSQISKVRTGRASPSLLDGIVVEYYGTPTPLRQLANVVAEDS 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
+L I +D+S +IEKAI++SDLG+ P++ G VIR+ LP LT ERRK+L KVV AE
Sbjct: 63 RTLAITVFDRSMSPAIEKAIMASDLGLNPSSAGTVIRVPLPALTEERRKDLIKVVRGDAE 122
Query: 214 EGKVVM 219
+G++ +
Sbjct: 123 QGRIAV 128
>gi|42519369|ref|NP_965299.1| ribosome recycling factor [Lactobacillus johnsonii NCC 533]
gi|227890234|ref|ZP_04008039.1| ribosome recycling factor [Lactobacillus johnsonii ATCC 33200]
gi|268319254|ref|YP_003292910.1| hypothetical protein FI9785_769 [Lactobacillus johnsonii FI9785]
gi|385825668|ref|YP_005862010.1| ribosome recycling factor [Lactobacillus johnsonii DPC 6026]
gi|417837369|ref|ZP_12483608.1| ribosome recycling factor [Lactobacillus johnsonii pf01]
gi|47116993|sp|P61305.1|RRF_LACJO RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|41583657|gb|AAS09265.1| ribosome recycling factor [Lactobacillus johnsonii NCC 533]
gi|227849236|gb|EEJ59322.1| ribosome recycling factor [Lactobacillus johnsonii ATCC 33200]
gi|262397629|emb|CAX66643.1| frr [Lactobacillus johnsonii FI9785]
gi|329667112|gb|AEB93060.1| ribosome recycling factor [Lactobacillus johnsonii DPC 6026]
gi|338762564|gb|EGP13832.1| ribosome recycling factor [Lactobacillus johnsonii pf01]
Length = 185
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 57/124 (45%), Positives = 87/124 (70%), Gaps = 1/124 (0%)
Query: 96 IEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSS 155
IEK K M+++I + + +R G +N ++LD I+V YYG P L ++ ++ P++
Sbjct: 6 IEK-AKDNMKKSIAVFQKELGGIRAGVANASLLDGIKVNYYGVPTPLTQMSSVSIPEARV 64
Query: 156 LLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEG 215
L++ PYDKS+L IE AI++SDLG+TP NDG VIR+ +PQLT ERR+E++K V K AE+G
Sbjct: 65 LMVTPYDKSTLDDIEHAILASDLGITPANDGTVIRIVIPQLTGERRQEIAKQVGKLAEKG 124
Query: 216 KVVM 219
K+ +
Sbjct: 125 KIAV 128
>gi|170768435|ref|ZP_02902888.1| ribosome releasing factor [Escherichia albertii TW07627]
gi|170122539|gb|EDS91470.1| ribosome releasing factor [Escherichia albertii TW07627]
Length = 185
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 89/126 (70%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
S I KD + RM++ ++ +T + +RTGR++P++LD I VEYYG+P L+ +A + DS
Sbjct: 3 SDIRKDAEVRMDKCVEAFKTQISKIRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVEDS 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
+L I +D+S ++EKAI++SDLG+ PN+ G IR+ LP LT ERRK+L+K+V +AE
Sbjct: 63 RTLKINVFDRSMSAAVEKAIMASDLGLNPNSAGSDIRVPLPPLTEERRKDLTKIVRGEAE 122
Query: 214 EGKVVM 219
+ +V +
Sbjct: 123 QARVAV 128
>gi|147669001|ref|YP_001213819.1| ribosome recycling factor [Dehalococcoides sp. BAV1]
gi|146269949|gb|ABQ16941.1| ribosome recycling factor [Dehalococcoides sp. BAV1]
Length = 173
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 82/116 (70%)
Query: 104 MERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDK 163
M ++D++ + +RTGRS+PA+++ I VEY G P + +A I+ PD + IQP+D+
Sbjct: 1 MSASLDVLLQELSGIRTGRSSPALVEHIRVEYAGVPTPINHLANISAPDPRYITIQPWDR 60
Query: 164 SSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
S L +IEKAI+ SDLG+ PNNDG +IRL +P L+ ERR+E+ K+V K+ EE K+ M
Sbjct: 61 SCLSAIEKAIMKSDLGLMPNNDGNIIRLNIPPLSEERRQEMIKIVNKRLEEDKIAM 116
>gi|116629461|ref|YP_814633.1| ribosome recycling factor [Lactobacillus gasseri ATCC 33323]
gi|238852611|ref|ZP_04643021.1| ribosome recycling factor [Lactobacillus gasseri 202-4]
gi|311110891|ref|ZP_07712288.1| ribosome recycling factor [Lactobacillus gasseri MV-22]
gi|420147387|ref|ZP_14654663.1| Ribosome-recycling factor (RRF) [Lactobacillus gasseri CECT 5714]
gi|122273601|sp|Q044C7.1|RRF_LACGA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|116095043|gb|ABJ60195.1| ribosome recycling factor [Lactobacillus gasseri ATCC 33323]
gi|238834757|gb|EEQ26984.1| ribosome recycling factor [Lactobacillus gasseri 202-4]
gi|311066045|gb|EFQ46385.1| ribosome recycling factor [Lactobacillus gasseri MV-22]
gi|398401388|gb|EJN54890.1| Ribosome-recycling factor (RRF) [Lactobacillus gasseri CECT 5714]
Length = 185
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 57/124 (45%), Positives = 88/124 (70%), Gaps = 1/124 (0%)
Query: 96 IEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSS 155
IEK K M+++I + + +R G +N ++L+ I+V+YYG P L ++ ++ P++
Sbjct: 6 IEK-AKDNMKKSIAVFQKELGGIRAGVANASLLEGIKVDYYGVPTPLTQMSSVSIPEARV 64
Query: 156 LLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEG 215
L++ PYDKSSL IE AI++SDLG+TP NDG VIR+ +PQLT ERR+E++K V K AE+G
Sbjct: 65 LMVTPYDKSSLDDIEHAILASDLGITPANDGTVIRIVIPQLTGERRQEIAKQVGKLAEKG 124
Query: 216 KVVM 219
K+ +
Sbjct: 125 KIAV 128
>gi|302865909|ref|YP_003834546.1| ribosome recycling factor [Micromonospora aurantiaca ATCC 27029]
gi|315502466|ref|YP_004081353.1| ribosome recycling factor [Micromonospora sp. L5]
gi|302568768|gb|ADL44970.1| ribosome recycling factor [Micromonospora aurantiaca ATCC 27029]
gi|315409085|gb|ADU07202.1| ribosome recycling factor [Micromonospora sp. L5]
Length = 185
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 81/121 (66%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+ + +MER I+ + F +RTGR+N AM +I ++YYGSP L +A I P+ ++I
Sbjct: 8 EAEEKMERAIEHAKEEFGGIRTGRANAAMFSRIVIDYYGSPTPLPQMASIAVPEPRMVII 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
+PYD S L ++EKAI SDLG PNN+G +R+ LPQ+T ERR+++ KV ++ EE KV
Sbjct: 68 KPYDNSQLGAMEKAIRDSDLGANPNNEGNQLRIVLPQMTEERRRDMIKVARQKGEEAKVA 127
Query: 219 M 219
+
Sbjct: 128 V 128
>gi|168188136|ref|ZP_02622771.1| ribosome recycling factor [Clostridium botulinum C str. Eklund]
gi|169294032|gb|EDS76165.1| ribosome recycling factor [Clostridium botulinum C str. Eklund]
Length = 185
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 88/119 (73%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
+ +M ++I +++ + S++ G++NPAMLD++ VEYYGS + +A +++P+ LLIQP
Sbjct: 10 QEKMLKSISVLKKDLGSMKAGKANPAMLDRVNVEYYGSETPINQLANVSSPEPRVLLIQP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
+DK+SLK IE+AI+ SDLG+ P+NDG VIRL +P+LT E RK++ K V K EE K+ +
Sbjct: 70 WDKNSLKDIERAILQSDLGLNPSNDGSVIRLIIPELTEETRKDIVKKVKKVGEESKIAI 128
>gi|392330815|ref|ZP_10275430.1| ribosome recycling factor [Streptococcus canis FSL Z3-227]
gi|391418494|gb|EIQ81306.1| ribosome recycling factor [Streptococcus canis FSL Z3-227]
Length = 185
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 55/103 (53%), Positives = 76/103 (73%)
Query: 115 FNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIV 174
+ S+R GR+N ++LD+I+V+YYG+P L +A I P++ LLI P+DKSS+K IE+A+
Sbjct: 24 YASIRAGRANASLLDRIQVDYYGAPTPLNQLASITVPEARVLLISPFDKSSIKDIERALN 83
Query: 175 SSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
+SDLG+TP NDG VIRL +P LT E RKEL+K V K E K+
Sbjct: 84 ASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGENAKI 126
>gi|116495065|ref|YP_806799.1| ribosome recycling factor [Lactobacillus casei ATCC 334]
gi|191638568|ref|YP_001987734.1| ribosome recycling factor [Lactobacillus casei BL23]
gi|227534923|ref|ZP_03964972.1| ribosome recycling factor [Lactobacillus paracasei subsp. paracasei
ATCC 25302]
gi|385820280|ref|YP_005856667.1| Ribosome recycling factor, RRF [Lactobacillus casei LC2W]
gi|385823477|ref|YP_005859819.1| Ribosome recycling factor, RRF [Lactobacillus casei BD-II]
gi|418005293|ref|ZP_12645288.1| ribosome recycling factor [Lactobacillus casei UW1]
gi|122263518|sp|Q038L5.1|RRF_LACC3 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|238693049|sp|B3WES5.1|RRF_LACCB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|116105215|gb|ABJ70357.1| ribosome recycling factor [Lactobacillus casei ATCC 334]
gi|190712870|emb|CAQ66876.1| Ribosome recycling factor (Ribosome-releasing factor) (RRF)
[Lactobacillus casei BL23]
gi|227187679|gb|EEI67746.1| ribosome recycling factor [Lactobacillus paracasei subsp. paracasei
ATCC 25302]
gi|327382607|gb|AEA54083.1| Ribosome recycling factor, RRF [Lactobacillus casei LC2W]
gi|327385804|gb|AEA57278.1| Ribosome recycling factor, RRF [Lactobacillus casei BD-II]
gi|410547222|gb|EKQ21459.1| ribosome recycling factor [Lactobacillus casei UW1]
Length = 185
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 83/119 (69%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K M +T + ++ ++R GR+N ++L++I VEYYG+P L +A I P+ L + P
Sbjct: 10 KVNMGKTEESLQRELGNIRAGRANASLLNQITVEYYGAPTPLNQMAAITIPEPRVLQVSP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
YDKSSLK+IE A+ +SDLG+ P NDG+VIRL +PQLT ERRKE++K V K +E K+ +
Sbjct: 70 YDKSSLKNIETALNASDLGINPANDGDVIRLVIPQLTGERRKEIAKEVGKYSESAKIAI 128
>gi|15806522|ref|NP_295233.1| ribosome recycling factor [Deinococcus radiodurans R1]
gi|22001957|sp|Q9RU82.1|RRF_DEIRA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|6459273|gb|AAF11077.1|AE001995_2 ribosome recycling factor [Deinococcus radiodurans R1]
Length = 183
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 85/129 (65%)
Query: 91 AEKSSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINT 150
A+ SI+ D + +M + I+ N + +RTGR+NP +L KI V+YYGS + + +A I T
Sbjct: 2 ADMKSIQADTREKMNKAIEAFENNLSVLRTGRANPGILKKIVVDYYGSQMPIDQVASITT 61
Query: 151 PDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAK 210
PD +L+I P+D+ +L IEKAI SDLG+ PNN G+ I ++LP LT ERRK+L K
Sbjct: 62 PDPRTLVITPWDRGALNPIEKAIRDSDLGLNPNNKGDTIFISLPMLTEERRKDLVKNAKN 121
Query: 211 QAEEGKVVM 219
AE+ ++ +
Sbjct: 122 YAEDARIAV 130
>gi|410463038|ref|ZP_11316580.1| ribosome recycling factor [Desulfovibrio magneticus str. Maddingley
MBC34]
gi|409983860|gb|EKO40207.1| ribosome recycling factor [Desulfovibrio magneticus str. Maddingley
MBC34]
Length = 184
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 83/121 (68%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + RM++ + + F+ +RTGR+ ++LD + V+YYG+ L +A + TPDS ++ I
Sbjct: 7 DAQDRMKKALAALDKEFSRLRTGRATTSLLDGVRVDYYGTSTQLDQLASVATPDSRTITI 66
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QP+D+ + IEKAI+ S LG+TP NDG+VIR+++P LT +RRK+L KV K EE KV
Sbjct: 67 QPWDRKAFADIEKAILKSGLGLTPVNDGKVIRISIPPLTEDRRKDLVKVAKKYVEEAKVA 126
Query: 219 M 219
M
Sbjct: 127 M 127
>gi|332670031|ref|YP_004453039.1| ribosome recycling factor [Cellulomonas fimi ATCC 484]
gi|332339069|gb|AEE45652.1| ribosome recycling factor [Cellulomonas fimi ATCC 484]
Length = 185
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 82/115 (71%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M++ +++ + +F ++RTGR+N AM K+ V+YYGSP L+ +A N ++ ++L+ P+D
Sbjct: 12 KMDKAVEVAKDDFATIRTGRANAAMFSKVFVDYYGSPTPLQQLASFNVTEARTILVSPFD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
KSS +IEKA+ SDLG+ P NDG VIR+ LP LT ERR++ K+ +AE+ +V
Sbjct: 72 KSSTTAIEKALRDSDLGVNPTNDGNVIRVVLPALTEERRRDFVKLAKAKAEDARV 126
>gi|333991239|ref|YP_004523853.1| ribosome recycling factor Frr [Mycobacterium sp. JDM601]
gi|333487207|gb|AEF36599.1| ribosome recycling factor Frr [Mycobacterium sp. JDM601]
Length = 185
Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 82/119 (68%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + +ME+ + + R + +VRTGR+NP M +I ++YYGSP + + IN P++ ++I
Sbjct: 8 DAEEKMEKAVAVAREDLATVRTGRANPGMFSRIVIDYYGSPTPITQLCSINVPEARLVVI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
+PY+ S L +IE AI +SDLG+ P+NDG +IR+ +PQLT ERRKEL K + E+ KV
Sbjct: 68 KPYEASQLGAIETAIRNSDLGLNPSNDGSLIRVAVPQLTEERRKELVKQAKSKGEDAKV 126
>gi|317153887|ref|YP_004121935.1| ribosome recycling factor [Desulfovibrio aespoeensis Aspo-2]
gi|316944138|gb|ADU63189.1| ribosome recycling factor [Desulfovibrio aespoeensis Aspo-2]
Length = 184
Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 86/125 (68%)
Query: 95 SIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSS 154
S+ D K RM I + +F+ +RTGR+ A++D I V+YYG+P + ++ ++ PD+
Sbjct: 3 SVLNDGKKRMAGAISALEKDFSKLRTGRATTALVDTIVVDYYGTPTPINQLSSVSVPDAK 62
Query: 155 SLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEE 214
S+ IQP+D+ + ++EKAI +SDLG+ P NDG++IR+++P LT ERRKEL KV K EE
Sbjct: 63 SITIQPWDRGAFGAVEKAIQTSDLGLNPVNDGKIIRISIPPLTEERRKELVKVAKKYTEE 122
Query: 215 GKVVM 219
K+ +
Sbjct: 123 CKIAI 127
>gi|158520494|ref|YP_001528364.1| ribosome recycling factor [Desulfococcus oleovorans Hxd3]
gi|238686879|sp|A8ZTM3.1|RRF_DESOH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|158509320|gb|ABW66287.1| ribosome recycling factor [Desulfococcus oleovorans Hxd3]
Length = 185
Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 93/122 (76%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
++++ +M +T+++ + + VRTGR++ A+LD I V+YYG+P L +A ++ P+S ++
Sbjct: 7 EEIEEKMGKTLEVFKNDLKKVRTGRASLALLDGIVVDYYGTPTPLNQLASLSVPESRLIV 66
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
IQP+D +++K +EKAI+ +++ +TP+NDG+VIRL++P LT +RRKE++K V + AEE KV
Sbjct: 67 IQPWDATAIKDVEKAILQANIDLTPSNDGKVIRLSIPPLTEDRRKEIAKRVNQMAEEHKV 126
Query: 218 VM 219
M
Sbjct: 127 AM 128
>gi|340354967|ref|ZP_08677662.1| ribosome recycling factor [Sporosarcina newyorkensis 2681]
gi|339622845|gb|EGQ27357.1| ribosome recycling factor [Sporosarcina newyorkensis 2681]
Length = 185
Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 82/117 (70%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
RME+ S+R GR+N ++LD+I V YYG+P L +A I+ P+ +++QPYD
Sbjct: 12 RMEKAHSAYTRQLASIRAGRANASLLDRISVIYYGAPTPLNQMAGISVPEPRLIVVQPYD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
K+++ IEKAI+ SD+G+TP+NDG VIRL +P LT ERRKEL K V ++AE+ KV +
Sbjct: 72 KTTIGEIEKAIMKSDIGITPSNDGSVIRLAVPALTEERRKELVKEVKREAEDAKVAI 128
>gi|423017271|ref|ZP_17007992.1| ribosome recycling factor [Achromobacter xylosoxidans AXX-A]
gi|338779720|gb|EGP44155.1| ribosome recycling factor [Achromobacter xylosoxidans AXX-A]
Length = 186
Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 88/126 (69%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+ I K +ARM +++D ++TN +RTGR++ +LD ++VEYYGSPV + + +N D+
Sbjct: 4 AEIRKSAEARMAKSLDTLKTNLAKIRTGRAHTGILDHVQVEYYGSPVPISQVGNVNLIDA 63
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
++ +QPY+KS +IEKAI SDLG+ P + G+ IR+ +P LT ERR++L+KVV + E
Sbjct: 64 RTISVQPYEKSMAAAIEKAIRESDLGLNPMSLGDSIRVPMPALTEERRRDLTKVVRSEGE 123
Query: 214 EGKVVM 219
+ KV +
Sbjct: 124 DAKVAV 129
>gi|340794662|ref|YP_004760125.1| ribosome-recycling factor [Corynebacterium variabile DSM 44702]
gi|340534572|gb|AEK37052.1| ribosome-recycling factor [Corynebacterium variabile DSM 44702]
Length = 185
Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 83/119 (69%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + M R++D VR + ++RTGR+NPAM +++ EYYG + +A I+ P+ L+I
Sbjct: 8 DAEDHMSRSVDHVREDLTTIRTGRANPAMFNRVFAEYYGMRTPITQMATISVPEPRMLII 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
+PY+ S ++ IE AI +SDLG+ P NDG+V+R+T+PQLT ERRK+L KV + E+ K+
Sbjct: 68 KPYEMSVMQEIENAIRNSDLGVNPTNDGQVLRVTIPQLTEERRKDLVKVARGKGEDAKI 126
>gi|404418488|ref|ZP_11000255.1| ribosome recycling factor [Staphylococcus arlettae CVD059]
gi|403489081|gb|EJY94659.1| ribosome recycling factor [Staphylococcus arlettae CVD059]
Length = 184
Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 58/126 (46%), Positives = 88/126 (69%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
S I D K++M +TID ++ GR+N +L+ + V+YYG+P ++ +A IN P++
Sbjct: 2 SDIINDTKSKMTKTIDSFSRELANISAGRANSNLLNGVTVDYYGAPTPVQQLASINVPEA 61
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
L+I PYDKSS+ +EKAI++++LG+ P++DGEVIR+++P LT ERRKEL K V K AE
Sbjct: 62 RLLVISPYDKSSVADVEKAIIAANLGVNPSSDGEVIRISVPALTEERRKELVKEVKKIAE 121
Query: 214 EGKVVM 219
KV +
Sbjct: 122 NAKVAI 127
>gi|308048672|ref|YP_003912238.1| ribosome recycling factor [Ferrimonas balearica DSM 9799]
gi|307630862|gb|ADN75164.1| ribosome recycling factor [Ferrimonas balearica DSM 9799]
Length = 185
Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 89/126 (70%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+ I+KD K RM ++++ +T + VRTGR++P++LD I V YYG LK + + T DS
Sbjct: 3 NDIKKDAKDRMVKSVEATQTQMSKVRTGRAHPSLLDSIMVSYYGVDTPLKQVGNVTTEDS 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
+L + +DKS ++++EKAI++SDLG+ PN+ G +IR+ LP LT ERR++L KVV +AE
Sbjct: 63 RTLAVTVFDKSMIQAVEKAIMASDLGLNPNSAGTMIRIPLPPLTEERRRDLVKVVRAEAE 122
Query: 214 EGKVVM 219
G+V +
Sbjct: 123 HGRVAV 128
>gi|225619145|ref|YP_002720371.1| ribosome recycling factor [Brachyspira hyodysenteriae WA1]
gi|225213964|gb|ACN82698.1| ribosome recycling factor [Brachyspira hyodysenteriae WA1]
Length = 182
Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 83/119 (69%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K RME+ I ++ + +RTGR+N ++LD ++VE YGS + LK + ++TPDS +++IQP
Sbjct: 7 KDRMEKAISSLQNDLKGIRTGRANASILDGVKVEAYGSSMPLKQVGNVSTPDSRTIMIQP 66
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
+DK + IEKAI+ +DLG P NDG IR+ +P+LT ERR+EL K V + EE K+ +
Sbjct: 67 FDKGLVSDIEKAILKADLGFNPFNDGGNIRIVVPELTKERREELKKGVRHRGEEAKIAV 125
>gi|212710394|ref|ZP_03318522.1| hypothetical protein PROVALCAL_01454 [Providencia alcalifaciens DSM
30120]
gi|422020035|ref|ZP_16366577.1| ribosome recycling factor [Providencia alcalifaciens Dmel2]
gi|212686976|gb|EEB46504.1| hypothetical protein PROVALCAL_01454 [Providencia alcalifaciens DSM
30120]
gi|414102659|gb|EKT64251.1| ribosome recycling factor [Providencia alcalifaciens Dmel2]
Length = 185
Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 58/126 (46%), Positives = 91/126 (72%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+ I+KD + RME++++ +++ + VRTGR++P++LD I VEYYGS L+ +A + DS
Sbjct: 3 NEIQKDAQDRMEKSLESLKSQISKVRTGRASPSLLDGITVEYYGSATPLRQLANVTVEDS 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
+L I +D+S +IEKAI++SDLG+ P++ G VIR+ LP LT ERRK+L KVV AE
Sbjct: 63 RTLAISVFDRSMSPAIEKAIMASDLGLNPSSAGTVIRVPLPPLTEERRKDLIKVVRGDAE 122
Query: 214 EGKVVM 219
+G++ +
Sbjct: 123 QGRIAI 128
>gi|299534751|ref|ZP_07048081.1| ribosome recycling factor [Lysinibacillus fusiformis ZC1]
gi|424737078|ref|ZP_18165534.1| ribosome recycling factor [Lysinibacillus fusiformis ZB2]
gi|298729839|gb|EFI70384.1| ribosome recycling factor [Lysinibacillus fusiformis ZC1]
gi|422948910|gb|EKU43286.1| ribosome recycling factor [Lysinibacillus fusiformis ZB2]
Length = 185
Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 82/119 (68%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K +M +TI S+R GR+N ++LD+I V+YYG+ + +A ++ P++ L+I P
Sbjct: 10 KEKMNKTIAAFSRELASIRAGRANASLLDRISVDYYGAATPINQLAGVSIPEARLLVITP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
YDKS L IEKAI+ SD+G+TP NDG VIRL +P LT ERRK+L K V K+AE+ K+ +
Sbjct: 70 YDKSILGDIEKAIMKSDIGITPTNDGSVIRLMIPALTEERRKDLVKQVKKEAEDAKIAV 128
>gi|417986958|ref|ZP_12627520.1| ribosome recycling factor [Lactobacillus casei 32G]
gi|410524022|gb|EKP98939.1| ribosome recycling factor [Lactobacillus casei 32G]
Length = 218
Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 57/120 (47%), Positives = 83/120 (69%)
Query: 100 VKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQ 159
K M +T + ++ ++R GR+N ++L++I VEYYG+P L +A I P+ L +
Sbjct: 9 AKVNMGKTEESLQRELGNIRAGRANASLLNQITVEYYGAPTPLNQMAAITIPEPRVLQVS 68
Query: 160 PYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
PYDKSSLK+IE A+ +SDLG+ P NDG+VIRL +PQLT ERRKE++K V K +E K+ +
Sbjct: 69 PYDKSSLKNIETALNASDLGINPANDGDVIRLVIPQLTGERRKEIAKEVGKYSESAKIAV 128
>gi|300743956|ref|ZP_07072976.1| ribosome recycling factor [Rothia dentocariosa M567]
gi|311113206|ref|YP_003984428.1| ribosome recycling factor [Rothia dentocariosa ATCC 17931]
gi|300380317|gb|EFJ76880.1| ribosome recycling factor [Rothia dentocariosa M567]
gi|310944700|gb|ADP40994.1| ribosome recycling factor [Rothia dentocariosa ATCC 17931]
Length = 185
Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 81/115 (70%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M++TI+ ++T F VRTGR NPA+ I +YYG+P L+ + N D+ ++ I P+D
Sbjct: 12 KMDKTIEAIKTEFAKVRTGRVNPAIFSSITADYYGAPTPLQQLVSFNVEDARTVKIVPFD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
S+L +IEKA+ SDLG+ P+NDG IR+ +P++TSERRKE K+V +AEE +V
Sbjct: 72 VSALAAIEKAVRDSDLGVNPSNDGAAIRVVMPEMTSERRKEYIKLVNHKAEEARV 126
>gi|257867709|ref|ZP_05647362.1| ribosome recycling factor [Enterococcus casseliflavus EC30]
gi|257874036|ref|ZP_05653689.1| ribosome recycling factor [Enterococcus casseliflavus EC10]
gi|257876615|ref|ZP_05656268.1| ribosome recycling factor [Enterococcus casseliflavus EC20]
gi|325571087|ref|ZP_08146659.1| ribosome recycling factor [Enterococcus casseliflavus ATCC 12755]
gi|420264018|ref|ZP_14766653.1| ribosome recycling factor [Enterococcus sp. C1]
gi|257801792|gb|EEV30695.1| ribosome recycling factor [Enterococcus casseliflavus EC30]
gi|257808200|gb|EEV37022.1| ribosome recycling factor [Enterococcus casseliflavus EC10]
gi|257810781|gb|EEV39601.1| ribosome recycling factor [Enterococcus casseliflavus EC20]
gi|325156172|gb|EGC68358.1| ribosome recycling factor [Enterococcus casseliflavus ATCC 12755]
gi|394768917|gb|EJF48794.1| ribosome recycling factor [Enterococcus sp. C1]
Length = 185
Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 84/121 (69%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+ K +M++ + ++ +R GR+N ++LD++ V YYG P L +A I P++ L+I
Sbjct: 8 EAKDKMKKAAENLQRELGQIRAGRANASILDRVMVTYYGVPTPLNQMASITIPEARILMI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
P+DK+ ++ +EKAI+ SD+G+TP NDG VIRL +PQLT ERRKEL+K V K+AE K+
Sbjct: 68 TPFDKTMIQEVEKAIMQSDIGITPANDGTVIRLVIPQLTEERRKELAKDVKKEAENAKIA 127
Query: 219 M 219
+
Sbjct: 128 V 128
>gi|239631340|ref|ZP_04674371.1| ribosome recycling factor [Lactobacillus paracasei subsp. paracasei
8700:2]
gi|301066628|ref|YP_003788651.1| ribosome recycling factor [Lactobacillus casei str. Zhang]
gi|417980862|ref|ZP_12621540.1| ribosome recycling factor [Lactobacillus casei 12A]
gi|417983599|ref|ZP_12624235.1| ribosome recycling factor [Lactobacillus casei 21/1]
gi|417989829|ref|ZP_12630328.1| ribosome recycling factor [Lactobacillus casei A2-362]
gi|417993096|ref|ZP_12633446.1| ribosome recycling factor [Lactobacillus casei CRF28]
gi|417996450|ref|ZP_12636729.1| ribosome recycling factor [Lactobacillus casei M36]
gi|417999317|ref|ZP_12639527.1| ribosome recycling factor [Lactobacillus casei T71499]
gi|418002256|ref|ZP_12642378.1| ribosome recycling factor [Lactobacillus casei UCD174]
gi|418008179|ref|ZP_12648047.1| ribosome recycling factor [Lactobacillus casei UW4]
gi|418011017|ref|ZP_12650787.1| ribosome recycling factor [Lactobacillus casei Lc-10]
gi|418014518|ref|ZP_12654114.1| ribosome recycling factor [Lactobacillus casei Lpc-37]
gi|239525805|gb|EEQ64806.1| ribosome recycling factor [Lactobacillus paracasei subsp. paracasei
8700:2]
gi|300439035|gb|ADK18801.1| Ribosome recycling factor [Lactobacillus casei str. Zhang]
gi|410524203|gb|EKP99119.1| ribosome recycling factor [Lactobacillus casei 12A]
gi|410527868|gb|EKQ02730.1| ribosome recycling factor [Lactobacillus casei 21/1]
gi|410532008|gb|EKQ06719.1| ribosome recycling factor [Lactobacillus casei CRF28]
gi|410535296|gb|EKQ09921.1| ribosome recycling factor [Lactobacillus casei M36]
gi|410537078|gb|EKQ11658.1| ribosome recycling factor [Lactobacillus casei A2-362]
gi|410539337|gb|EKQ13870.1| ribosome recycling factor [Lactobacillus casei T71499]
gi|410544684|gb|EKQ19005.1| ribosome recycling factor [Lactobacillus casei UCD174]
gi|410547123|gb|EKQ21361.1| ribosome recycling factor [Lactobacillus casei UW4]
gi|410553167|gb|EKQ27173.1| ribosome recycling factor [Lactobacillus casei Lc-10]
gi|410553566|gb|EKQ27568.1| ribosome recycling factor [Lactobacillus casei Lpc-37]
Length = 185
Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 83/119 (69%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K M +T + ++ ++R GR+N ++L++I VEYYG+P L +A I P+ L + P
Sbjct: 10 KVNMGKTEESLQRELGNIRAGRANASLLNQITVEYYGAPTPLNQMAAITIPEPRVLQVSP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
YDKSSLK+IE A+ +SDLG+ P NDG+VIRL +PQLT ERRKE++K V K +E K+ +
Sbjct: 70 YDKSSLKNIETALNASDLGINPANDGDVIRLVIPQLTGERRKEIAKEVGKYSESAKIAV 128
>gi|409099858|ref|ZP_11219882.1| ribosome recycling factor [Pedobacter agri PB92]
Length = 187
Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 56/121 (46%), Positives = 85/121 (70%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D ++ M++ ID + +R G+++ MLD I V+YYG+ +L +A INTPD+ S++I
Sbjct: 11 DAQSSMDKAIDHCESELTKIRAGKASAGMLDGIFVDYYGASTALAQVASINTPDARSIVI 70
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QP++KS L +IEKAI +++G+ P NDG VIRL +P LT ERRK+L K V ++AE G+V
Sbjct: 71 QPWEKSLLTTIEKAIQVANIGINPQNDGIVIRLVVPPLTEERRKDLVKKVKEEAERGRVT 130
Query: 219 M 219
+
Sbjct: 131 V 131
>gi|386857050|ref|YP_006261227.1| Ribosome-recycling factor [Deinococcus gobiensis I-0]
gi|380000579|gb|AFD25769.1| Ribosome-recycling factor [Deinococcus gobiensis I-0]
Length = 183
Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 87/129 (67%)
Query: 91 AEKSSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINT 150
A+ SI+ D + RM + I+ + N + +RTGR+NP +L K+ V+YYGS + + +A I T
Sbjct: 2 ADMKSIQADARERMGKAIEALENNLSVLRTGRANPGILKKVLVDYYGSTMPIDQVASITT 61
Query: 151 PDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAK 210
PD+ +L+I P+D+ +L IE+AI SDLG+ PNN G+ I ++LP LT ERRK+L K
Sbjct: 62 PDARTLVITPWDRGALAPIERAIRDSDLGLNPNNKGDTIFISLPMLTEERRKDLVKNAKN 121
Query: 211 QAEEGKVVM 219
+E+ +V +
Sbjct: 122 YSEDARVAI 130
>gi|87310510|ref|ZP_01092639.1| Ribosome recycling factor [Blastopirellula marina DSM 3645]
gi|87286731|gb|EAQ78636.1| Ribosome recycling factor [Blastopirellula marina DSM 3645]
Length = 186
Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 57/124 (45%), Positives = 87/124 (70%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+I + + RME+ I+ ++ N + +RTGR+NP ++D + VE YGS +K IA ++ P+
Sbjct: 4 DNITTEAEDRMEKAIEHLKHNLSGIRTGRANPGLVDSLRVEVYGSLQPIKQIASVSVPEP 63
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
+ LLI+PYD ++K IEKAIV+SDLGM P +DG VIRL +P L++E RK+L + + +E
Sbjct: 64 TQLLIRPYDTGAIKDIEKAIVASDLGMAPQSDGRVIRLNVPALSTEVRKKLVSRIKELSE 123
Query: 214 EGKV 217
E KV
Sbjct: 124 EAKV 127
>gi|296127609|ref|YP_003634861.1| ribosome recycling factor [Brachyspira murdochii DSM 12563]
gi|296019425|gb|ADG72662.1| ribosome recycling factor [Brachyspira murdochii DSM 12563]
Length = 182
Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 83/119 (69%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K RME+ I ++ + +RTGR+N ++LD ++VE YGS + LK + ++TPDS +++IQP
Sbjct: 7 KDRMEKAISSLQNDLKGIRTGRANASILDGVKVEAYGSNMPLKQVGNVSTPDSRTIMIQP 66
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
+DK + IEKAI+ +DLG P NDG IR+ +P+LT ERR+EL K V + EE K+ +
Sbjct: 67 FDKGLVSDIEKAILKADLGFNPFNDGGNIRIVVPELTKERREELKKGVRHRGEEAKIAV 125
>gi|227529099|ref|ZP_03959148.1| ribosome recycling factor [Lactobacillus vaginalis ATCC 49540]
gi|227350943|gb|EEJ41234.1| ribosome recycling factor [Lactobacillus vaginalis ATCC 49540]
Length = 186
Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 84/121 (69%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+ K +M ++ D +R +R GR+N ++L+ ++V+YYG+P L +A I P++ LL+
Sbjct: 10 EAKDKMAKSGDALRRTLADIRAGRANASLLNGVKVDYYGAPTPLNQVASITIPEARQLLV 69
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
PYD+SSL +IEKAI +++LG+TP NDG IR+ +PQLT ERRKEL K V + E+ KV
Sbjct: 70 TPYDESSLDNIEKAIYAANLGLTPQNDGSAIRILIPQLTEERRKELVKDVKAELEKAKVA 129
Query: 219 M 219
+
Sbjct: 130 V 130
>gi|420163405|ref|ZP_14670152.1| putative ribosome recycling factor [Staphylococcus epidermidis
NIHLM095]
gi|394235094|gb|EJD80668.1| putative ribosome recycling factor [Staphylococcus epidermidis
NIHLM095]
Length = 151
Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 87/120 (72%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
S I KD K+RM+++ID + ++ GR+N +L+ + V+YYG+P ++ +A IN P++
Sbjct: 2 SDIIKDTKSRMQKSIDNLSRELANISAGRANSNLLNGVTVDYYGAPTPVQQLASINVPEA 61
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
L+I PYDK+S+ IEKAI++++LG+ P +DGEVIR+++P LT ERRKEL K V K A+
Sbjct: 62 RLLVISPYDKTSVADIEKAIIAANLGVNPTSDGEVIRISVPALTEERRKELVKEVKKLAK 121
>gi|403251727|ref|ZP_10918055.1| ribosome recycling factor [actinobacterium SCGC AAA027-L06]
gi|402914951|gb|EJX35946.1| ribosome recycling factor [actinobacterium SCGC AAA027-L06]
Length = 187
Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 79/115 (68%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M + ID+ + +F ++RTGR++PAM K+ V+YYG+ L +A + P++ LI PYD
Sbjct: 14 KMNKAIDVAKEDFATIRTGRAHPAMFAKLMVDYYGTGTPLSQLATVQVPEARLALITPYD 73
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
K ++ +IEK+I SDLG+ P +DG VIR+ PQLT ERRKE KV +AE+ KV
Sbjct: 74 KGAMAAIEKSIRDSDLGVNPGSDGTVIRVNFPQLTEERRKEFIKVAKGKAEDSKV 128
>gi|385261090|ref|ZP_10039222.1| ribosome recycling factor [Streptococcus sp. SK140]
gi|385189489|gb|EIF36953.1| ribosome recycling factor [Streptococcus sp. SK140]
Length = 185
Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 60/126 (47%), Positives = 84/126 (66%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
++I + K RM ++ + F S+R GR+N ++LD+I VEYYG L IA I P++
Sbjct: 3 NAIVEKAKERMTQSHHSLAREFGSIRAGRANASLLDRIHVEYYGVETPLNQIASITIPEA 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
LL+ P+DKSSLK IE+A+ +SDLG+TP NDG VIRL +P LT E R++L+K V K E
Sbjct: 63 RVLLVTPFDKSSLKDIERALNASDLGITPANDGSVIRLVIPALTEETRRDLAKEVKKVGE 122
Query: 214 EGKVVM 219
KV +
Sbjct: 123 NAKVAI 128
>gi|225570389|ref|ZP_03779414.1| hypothetical protein CLOHYLEM_06489 [Clostridium hylemonae DSM
15053]
gi|225160760|gb|EEG73379.1| hypothetical protein CLOHYLEM_06489 [Clostridium hylemonae DSM
15053]
Length = 183
Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 55/117 (47%), Positives = 82/117 (70%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M +TI + ++R GR+NP +L+KI V YYG+P ++ +A ++ P++ + IQP++
Sbjct: 11 KMNKTIASLEGELAAIRAGRANPNVLNKIMVNYYGTPTPIQQVANVSVPEARMIHIQPWE 70
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
KS +K IEKAI++SDLG+ P NDG IRL P+LT ERRKEL+K V K+ E KV +
Sbjct: 71 KSMVKEIEKAIMTSDLGINPTNDGSAIRLAFPELTEERRKELAKDVKKKGENAKVAI 127
>gi|111225137|ref|YP_715931.1| ribosome recycling factor [Frankia alni ACN14a]
gi|123043981|sp|Q0RDQ6.1|RRF_FRAAA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|111152669|emb|CAJ64410.1| ribosome releasing factor [Frankia alni ACN14a]
Length = 185
Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 84/119 (70%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + +ME+ + + + +F ++RTGR PA+ KI V+YYG+P ++ +A + P+ ++I
Sbjct: 8 DAEEKMEKAVSVAKEDFANIRTGRITPAVFSKIVVDYYGAPTPVQQLASFHIPEPRMVII 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
PYDKSSL SIEKA+ SDLG+ P+NDG +IR+ P+L+ +RR++L KV +AEE +V
Sbjct: 68 TPYDKSSLASIEKAVRDSDLGVNPSNDGTIIRIVFPELSEQRRRDLVKVARSKAEEARV 126
>gi|445063838|ref|ZP_21375984.1| ribosome recycling factor [Brachyspira hampsonii 30599]
gi|444504777|gb|ELV05393.1| ribosome recycling factor [Brachyspira hampsonii 30599]
Length = 182
Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 83/119 (69%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K RME+ + ++ + +RTGR+N ++LD ++VE YGS + LK + ++TPDS +++IQP
Sbjct: 7 KDRMEKAVSSLQNDLKGIRTGRANASILDGVKVEAYGSSMPLKQVGNVSTPDSKTIMIQP 66
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
+DK + IEKAI+ +DLG P NDG IR+ +P+LT ERR+EL K V + EE K+ +
Sbjct: 67 FDKGLVSDIEKAILKADLGFNPFNDGGNIRIVVPELTKERREELKKGVRHRGEEAKIAV 125
>gi|296268981|ref|YP_003651613.1| ribosome recycling factor [Thermobispora bispora DSM 43833]
gi|296091768|gb|ADG87720.1| ribosome recycling factor [Thermobispora bispora DSM 43833]
Length = 185
Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 82/115 (71%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M++ + + + +F ++R GR PA+ +KI V+YYGSP L+ +A + P++ ++IQP+D
Sbjct: 12 KMDKAVSVAKEDFATIRAGRITPAIFNKINVDYYGSPTPLQQLASFHVPEARLVIIQPFD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
KS+L +IEKAI SDLG+ P+NDG VIR+ P+L+ ERRKE K+ +AE +V
Sbjct: 72 KSALNAIEKAIRDSDLGVNPSNDGNVIRVVFPELSEERRKEYIKMARNKAESARV 126
>gi|48474737|sp|Q8VS52.1|RRF_LACRE RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|18139798|gb|AAL60144.1|AF401482_3 ribosome recycling factor [Lactobacillus reuteri]
Length = 186
Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 84/121 (69%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+ K +M ++ D +R +R GR+N ++L+ ++V+YYG+P L +A I P++ LL+
Sbjct: 10 EAKDKMAKSGDALRRTLADIRAGRANASLLNGVKVDYYGAPTPLNQVASITIPEARQLLV 69
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
PYD+SSL +IEKAI +++LG+TP NDG IR+ +PQLT ERRKEL K V + E+ KV
Sbjct: 70 TPYDESSLDNIEKAIYAANLGLTPQNDGSAIRILIPQLTEERRKELVKDVKAELEKAKVA 129
Query: 219 M 219
+
Sbjct: 130 V 130
>gi|366159383|ref|ZP_09459245.1| ribosome recycling factor [Escherichia sp. TW09308]
gi|432375096|ref|ZP_19618119.1| ribosome-recycling factor [Escherichia coli KTE11]
gi|430892354|gb|ELC14846.1| ribosome-recycling factor [Escherichia coli KTE11]
Length = 185
Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 89/126 (70%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
S I KD + RM++ ++ +T + +RTGR++P++LD I VEYYG+P L+ +A + DS
Sbjct: 3 SDIRKDAEVRMDKCVEAFKTQISKIRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVEDS 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
+L I +D+S ++EKAI++SDLG+ PN+ G IR+ LP LT ERRK+L+K+V +AE
Sbjct: 63 RTLKINVFDRSMSPAVEKAIMASDLGLNPNSAGSDIRVPLPPLTEERRKDLTKIVRGEAE 122
Query: 214 EGKVVM 219
+ +V +
Sbjct: 123 QARVAV 128
>gi|410697298|gb|AFV76366.1| ribosome recycling factor [Thermus oshimai JL-2]
Length = 185
Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 85/121 (70%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+ +A M+++++ + N +RTGR+NPA+L ++VEYYG+ V L IA + PD+ +L++
Sbjct: 9 ETRAHMQKSLEALEHNLAGLRTGRANPALLLHLKVEYYGTHVPLNQIATVTAPDARTLVV 68
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
Q +D+++LK+IEKAI SDLG+ P N G+ + + +P LT ERRKEL + AEEG++
Sbjct: 69 QSWDQNALKAIEKAIRDSDLGLNPANKGDALYINIPPLTEERRKELVRAARHYAEEGRIA 128
Query: 219 M 219
+
Sbjct: 129 I 129
>gi|334144058|ref|YP_004537214.1| Ribosome-recycling factor [Thioalkalimicrobium cyclicum ALM1]
gi|333964969|gb|AEG31735.1| Ribosome-recycling factor [Thioalkalimicrobium cyclicum ALM1]
Length = 185
Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 86/126 (68%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
S I D RM++++D + NF +RTGR++P++LD ++V+YYGS V + +A IN DS
Sbjct: 3 SEIRDDADLRMQKSVDTLVANFAKIRTGRAHPSILDSVKVDYYGSEVPISQVANINIEDS 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
+L +QP+++ L+ IEKAI+ SDLG+ P G ++R+ +P LT ERRKE +K+ +AE
Sbjct: 63 RTLAVQPWEQPMLQKIEKAIMMSDLGINPVTTGNMMRIPMPMLTEERRKEFAKLARSEAE 122
Query: 214 EGKVVM 219
KV +
Sbjct: 123 NAKVAI 128
>gi|291459117|ref|ZP_06598507.1| ribosome recycling factor [Oribacterium sp. oral taxon 078 str.
F0262]
gi|291418371|gb|EFE92090.1| ribosome recycling factor [Oribacterium sp. oral taxon 078 str.
F0262]
Length = 184
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 79/117 (67%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M +T D + + ++R GR+NP +LD+I V+YYG+ L+ + I+ P++ L IQP+D
Sbjct: 11 KMHKTHDNLMSELATIRAGRANPHVLDRITVDYYGTQTPLQQVGNISVPEARMLQIQPWD 70
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
K LK IEKAI SDLG+ P NDG IRL P+LT ERR+EL+K V K+ E KV +
Sbjct: 71 KGMLKEIEKAINLSDLGINPTNDGNTIRLVFPELTEERRRELTKEVKKKGEAAKVAI 127
>gi|433463488|ref|ZP_20421041.1| ribosome recycling factor [Halobacillus sp. BAB-2008]
gi|432187488|gb|ELK44773.1| ribosome recycling factor [Halobacillus sp. BAB-2008]
Length = 185
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 84/119 (70%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+ K +ME+ + +VR GR+NP++LD + V+YYG+ L +AQ++ P+ L+I
Sbjct: 8 ETKQQMEQAVQAFSRQLATVRAGRANPSILDNVYVDYYGAATPLNQLAQVSAPEPRLLVI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
PYDK+++ IEKAI +DLG++P++DG V+R+ +P LT ERRK+L+KVV K +EE KV
Sbjct: 68 TPYDKTAIAEIEKAIQKADLGLSPSSDGNVVRINIPALTEERRKDLAKVVGKYSEESKV 126
>gi|223041490|ref|ZP_03611693.1| ribosome recycling factor [Actinobacillus minor 202]
gi|240948667|ref|ZP_04753039.1| ribosome recycling factor [Actinobacillus minor NM305]
gi|223017748|gb|EEF16155.1| ribosome recycling factor [Actinobacillus minor 202]
gi|240296883|gb|EER47461.1| ribosome recycling factor [Actinobacillus minor NM305]
Length = 185
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 92/126 (73%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+ I+KD + RME+++D ++++ + +RTGR+ P++LD I+VEYYGS L+ +A + D+
Sbjct: 3 NEIKKDTQDRMEKSLDALKSHISKIRTGRAQPSLLDGIQVEYYGSATPLRQVANVVAEDA 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
+L + +D+S + ++EKAI++SDLG+ P++ G IR+ LP LT ERR++L K+V + E
Sbjct: 63 RTLAVNVFDRSLISAVEKAILTSDLGLNPSSAGATIRVPLPPLTEERRRDLIKIVKGEGE 122
Query: 214 EGKVVM 219
+GK+ +
Sbjct: 123 QGKIAI 128
>gi|15799854|ref|NP_285866.1| ribosome recycling factor [Escherichia coli O157:H7 str. EDL933]
gi|15829428|ref|NP_308201.1| ribosome recycling factor [Escherichia coli O157:H7 str. Sakai]
gi|16128165|ref|NP_414714.1| ribosome recycling factor [Escherichia coli str. K-12 substr.
MG1655]
gi|24111607|ref|NP_706117.1| ribosome recycling factor [Shigella flexneri 2a str. 301]
gi|26246119|ref|NP_752158.1| ribosome recycling factor [Escherichia coli CFT073]
gi|30061729|ref|NP_835900.1| ribosome recycling factor [Shigella flexneri 2a str. 2457T]
gi|74310792|ref|YP_309211.1| ribosome recycling factor [Shigella sonnei Ss046]
gi|82542771|ref|YP_406718.1| ribosome recycling factor [Shigella boydii Sb227]
gi|82775562|ref|YP_401909.1| ribosome recycling factor [Shigella dysenteriae Sd197]
gi|91209242|ref|YP_539228.1| ribosome recycling factor [Escherichia coli UTI89]
gi|110640391|ref|YP_668119.1| ribosome recycling factor [Escherichia coli 536]
gi|110804224|ref|YP_687744.1| ribosome recycling factor [Shigella flexneri 5 str. 8401]
gi|157155211|ref|YP_001461341.1| ribosome recycling factor [Escherichia coli E24377A]
gi|157159637|ref|YP_001456955.1| ribosome recycling factor [Escherichia coli HS]
gi|168751391|ref|ZP_02776413.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC4113]
gi|168755785|ref|ZP_02780792.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC4401]
gi|168764321|ref|ZP_02789328.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC4501]
gi|168770354|ref|ZP_02795361.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC4486]
gi|168777009|ref|ZP_02802016.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC4196]
gi|168782064|ref|ZP_02807071.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC4076]
gi|168789281|ref|ZP_02814288.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC869]
gi|170021475|ref|YP_001726429.1| ribosome recycling factor [Escherichia coli ATCC 8739]
gi|170079808|ref|YP_001729128.1| ribosome recycling factor [Escherichia coli str. K-12 substr.
DH10B]
gi|170683322|ref|YP_001742300.1| ribosome recycling factor [Escherichia coli SMS-3-5]
gi|187731916|ref|YP_001878974.1| ribosome recycling factor [Shigella boydii CDC 3083-94]
gi|188496088|ref|ZP_03003358.1| ribosome releasing factor [Escherichia coli 53638]
gi|191166361|ref|ZP_03028193.1| ribosome releasing factor [Escherichia coli B7A]
gi|191172803|ref|ZP_03034340.1| ribosome releasing factor [Escherichia coli F11]
gi|193063223|ref|ZP_03044314.1| ribosome releasing factor [Escherichia coli E22]
gi|193067565|ref|ZP_03048532.1| ribosome releasing factor [Escherichia coli E110019]
gi|194428316|ref|ZP_03060858.1| ribosome releasing factor [Escherichia coli B171]
gi|194433418|ref|ZP_03065697.1| ribosome releasing factor [Shigella dysenteriae 1012]
gi|194439153|ref|ZP_03071235.1| ribosome releasing factor [Escherichia coli 101-1]
gi|195938146|ref|ZP_03083528.1| ribosome recycling factor [Escherichia coli O157:H7 str. EC4024]
gi|208809164|ref|ZP_03251501.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC4206]
gi|208812775|ref|ZP_03254104.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC4045]
gi|208819126|ref|ZP_03259446.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC4042]
gi|209398036|ref|YP_002268780.1| ribosome recycling factor [Escherichia coli O157:H7 str. EC4115]
gi|209917362|ref|YP_002291446.1| ribosome recycling factor [Escherichia coli SE11]
gi|215485333|ref|YP_002327764.1| ribosome recycling factor [Escherichia coli O127:H6 str. E2348/69]
gi|217325138|ref|ZP_03441222.1| ribosome releasing factor [Escherichia coli O157:H7 str. TW14588]
gi|218547627|ref|YP_002381418.1| ribosome recycling factor [Escherichia fergusonii ATCC 35469]
gi|218552752|ref|YP_002385665.1| ribosome recycling factor [Escherichia coli IAI1]
gi|218557113|ref|YP_002390026.1| ribosome recycling factor [Escherichia coli S88]
gi|218688047|ref|YP_002396259.1| ribosome recycling factor [Escherichia coli ED1a]
gi|218693637|ref|YP_002401304.1| ribosome recycling factor [Escherichia coli 55989]
gi|218698592|ref|YP_002406221.1| ribosome recycling factor [Escherichia coli IAI39]
gi|218703426|ref|YP_002410945.1| ribosome recycling factor [Escherichia coli UMN026]
gi|222154997|ref|YP_002555136.1| ribosome recycling factor [Escherichia coli LF82]
gi|227884915|ref|ZP_04002720.1| ribosome recycling factor [Escherichia coli 83972]
gi|237704331|ref|ZP_04534812.1| ribosome-recycling factor [Escherichia sp. 3_2_53FAA]
gi|238899570|ref|YP_002925366.1| ribosome recycling factor [Escherichia coli BW2952]
gi|251783730|ref|YP_002998034.1| ribosome recycling factor [Escherichia coli BL21(DE3)]
gi|253774801|ref|YP_003037632.1| ribosome recycling factor [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|254160291|ref|YP_003043399.1| ribosome recycling factor [Escherichia coli B str. REL606]
gi|254287094|ref|YP_003052842.1| ribosome releasing factor [Escherichia coli BL21(DE3)]
gi|254791305|ref|YP_003076142.1| ribosome recycling factor [Escherichia coli O157:H7 str. TW14359]
gi|260842404|ref|YP_003220182.1| ribosome recycling factor [Escherichia coli O103:H2 str. 12009]
gi|260853382|ref|YP_003227273.1| ribosome recycling factor [Escherichia coli O26:H11 str. 11368]
gi|260866321|ref|YP_003232723.1| ribosome recycling factor [Escherichia coli O111:H- str. 11128]
gi|261226926|ref|ZP_05941207.1| ribosome recycling factor [Escherichia coli O157:H7 str. FRIK2000]
gi|261255330|ref|ZP_05947863.1| ribosome recycling factor [Escherichia coli O157:H7 str. FRIK966]
gi|291280994|ref|YP_003497812.1| ribosome recycling factor [Escherichia coli O55:H7 str. CB9615]
gi|293403241|ref|ZP_06647338.1| frr [Escherichia coli FVEC1412]
gi|293408264|ref|ZP_06652104.1| ribosome recycling factor [Escherichia coli B354]
gi|293418057|ref|ZP_06660679.1| ribosome recycling factor [Escherichia coli B185]
gi|293476829|ref|ZP_06665237.1| ribosome recycling factor [Escherichia coli B088]
gi|297521925|ref|ZP_06940311.1| ribosome recycling factor [Escherichia coli OP50]
gi|298378777|ref|ZP_06988661.1| ribosome-recycling factor [Escherichia coli FVEC1302]
gi|300816212|ref|ZP_07096435.1| ribosome recycling factor [Escherichia coli MS 107-1]
gi|300824105|ref|ZP_07104225.1| ribosome recycling factor [Escherichia coli MS 119-7]
gi|300900790|ref|ZP_07118934.1| ribosome recycling factor [Escherichia coli MS 198-1]
gi|300901991|ref|ZP_07120018.1| ribosome recycling factor [Escherichia coli MS 84-1]
gi|300920146|ref|ZP_07136597.1| ribosome recycling factor [Escherichia coli MS 115-1]
gi|300923036|ref|ZP_07139103.1| ribosome recycling factor [Escherichia coli MS 182-1]
gi|300932126|ref|ZP_07147411.1| ribosome recycling factor [Escherichia coli MS 187-1]
gi|300938579|ref|ZP_07153312.1| ribosome recycling factor [Escherichia coli MS 21-1]
gi|300949796|ref|ZP_07163770.1| ribosome recycling factor [Escherichia coli MS 116-1]
gi|300956055|ref|ZP_07168380.1| ribosome recycling factor [Escherichia coli MS 175-1]
gi|300984932|ref|ZP_07177197.1| ribosome recycling factor [Escherichia coli MS 200-1]
gi|300993607|ref|ZP_07180463.1| ribosome recycling factor [Escherichia coli MS 45-1]
gi|301025948|ref|ZP_07189432.1| ribosome recycling factor [Escherichia coli MS 69-1]
gi|301028665|ref|ZP_07191886.1| ribosome recycling factor [Escherichia coli MS 196-1]
gi|301049915|ref|ZP_07196840.1| ribosome recycling factor [Escherichia coli MS 185-1]
gi|301305308|ref|ZP_07211404.1| ribosome recycling factor [Escherichia coli MS 124-1]
gi|301330030|ref|ZP_07222714.1| ribosome recycling factor [Escherichia coli MS 78-1]
gi|301646495|ref|ZP_07246370.1| ribosome recycling factor [Escherichia coli MS 146-1]
gi|306815228|ref|ZP_07449377.1| ribosome recycling factor [Escherichia coli NC101]
gi|307311381|ref|ZP_07591023.1| ribosome recycling factor [Escherichia coli W]
gi|309796349|ref|ZP_07690758.1| ribosome recycling factor [Escherichia coli MS 145-7]
gi|312966308|ref|ZP_07780534.1| ribosome recycling factor [Escherichia coli 2362-75]
gi|312970272|ref|ZP_07784454.1| ribosome recycling factor [Escherichia coli 1827-70]
gi|331640626|ref|ZP_08341774.1| ribosome recycling factor [Escherichia coli H736]
gi|331645315|ref|ZP_08346426.1| ribosome recycling factor [Escherichia coli M605]
gi|331651077|ref|ZP_08352105.1| ribosome recycling factor [Escherichia coli M718]
gi|331661243|ref|ZP_08362175.1| ribosome recycling factor [Escherichia coli TA206]
gi|331661546|ref|ZP_08362470.1| ribosome recycling factor [Escherichia coli TA143]
gi|331666413|ref|ZP_08367294.1| ribosome recycling factor [Escherichia coli TA271]
gi|331671678|ref|ZP_08372476.1| ribosome recycling factor [Escherichia coli TA280]
gi|331680751|ref|ZP_08381410.1| ribosome recycling factor [Escherichia coli H591]
gi|331681557|ref|ZP_08382194.1| ribosome recycling factor [Escherichia coli H299]
gi|332282846|ref|ZP_08395259.1| ribosome-recycling factor [Shigella sp. D9]
gi|378714490|ref|YP_005279383.1| ribosome recycling factor [Escherichia coli KO11FL]
gi|383176779|ref|YP_005454784.1| ribosome recycling factor [Shigella sonnei 53G]
gi|384541743|ref|YP_005725804.1| Ribosome recycling factor [Shigella flexneri 2002017]
gi|386279215|ref|ZP_10056903.1| ribosome-recycling factor [Escherichia sp. 4_1_40B]
gi|386596935|ref|YP_006093335.1| ribosome recycling factor [Escherichia coli DH1]
gi|386597922|ref|YP_006099428.1| ribosome recycling factor [Escherichia coli IHE3034]
gi|386607264|ref|YP_006113564.1| ribosome recycling factor [Escherichia coli UM146]
gi|386607473|ref|YP_006122959.1| ribosome recycling factor [Escherichia coli W]
gi|386612336|ref|YP_006132002.1| ribosome recycling factor [Escherichia coli UMNK88]
gi|386617677|ref|YP_006137257.1| Ribosome recycling factor [Escherichia coli NA114]
gi|386622583|ref|YP_006142311.1| ribosome recycling factor [Escherichia coli O7:K1 str. CE10]
gi|386627694|ref|YP_006147414.1| ribosome recycling factor [Escherichia coli str. 'clone D i2']
gi|386632614|ref|YP_006152333.1| ribosome recycling factor [Escherichia coli str. 'clone D i14']
gi|386637530|ref|YP_006104328.1| ribosome recycling factor [Escherichia coli ABU 83972]
gi|386698670|ref|YP_006162507.1| ribosome recycling factor [Escherichia coli KO11FL]
gi|386707900|ref|YP_006171621.1| ribosome recycling factor [Escherichia coli W]
gi|387505099|ref|YP_006157355.1| ribosome recycling factor [Escherichia coli O55:H7 str. RM12579]
gi|387605647|ref|YP_006094503.1| ribosome recycling factor [Escherichia coli 042]
gi|387610644|ref|YP_006113760.1| ribosome recycling factor [Escherichia coli ETEC H10407]
gi|387615519|ref|YP_006118541.1| ribosome recycling factor [Escherichia coli O83:H1 str. NRG 857C]
gi|387619939|ref|YP_006127566.1| ribosome recycling factor [Escherichia coli DH1]
gi|387828240|ref|YP_003348177.1| ribosome releasing factor [Escherichia coli SE15]
gi|387880730|ref|YP_006311032.1| ribosome recycling factor [Escherichia coli Xuzhou21]
gi|388476290|ref|YP_488474.1| ribosome recycling factor [Escherichia coli str. K-12 substr.
W3110]
gi|404373483|ref|ZP_10978746.1| ribosome-recycling factor [Escherichia sp. 1_1_43]
gi|407467626|ref|YP_006785932.1| ribosome recycling factor [Escherichia coli O104:H4 str.
2009EL-2071]
gi|407483657|ref|YP_006780806.1| ribosome recycling factor [Escherichia coli O104:H4 str.
2011C-3493]
gi|410484197|ref|YP_006771743.1| ribosome recycling factor [Escherichia coli O104:H4 str.
2009EL-2050]
gi|415777469|ref|ZP_11488698.1| ribosome recycling factor [Escherichia coli 3431]
gi|415780880|ref|ZP_11490667.1| ribosome recycling factor [Escherichia coli EPECa14]
gi|415801925|ref|ZP_11499816.1| ribosome recycling factor [Escherichia coli E128010]
gi|415814275|ref|ZP_11505895.1| ribosome recycling factor [Escherichia coli LT-68]
gi|415823985|ref|ZP_11512360.1| ribosome recycling factor [Escherichia coli OK1180]
gi|415832534|ref|ZP_11517961.1| ribosome recycling factor [Escherichia coli OK1357]
gi|415837502|ref|ZP_11519576.1| ribosome recycling factor [Escherichia coli RN587/1]
gi|415849986|ref|ZP_11527018.1| ribosome recycling factor [Shigella sonnei 53G]
gi|415859690|ref|ZP_11533889.1| ribosome recycling factor [Shigella flexneri 2a str. 2457T]
gi|415864371|ref|ZP_11537465.1| ribosome recycling factor [Escherichia coli MS 85-1]
gi|415877382|ref|ZP_11543559.1| ribosome recycling factor [Escherichia coli MS 79-10]
gi|416274873|ref|ZP_11643834.1| Ribosome recycling factor [Shigella dysenteriae CDC 74-1112]
gi|416284607|ref|ZP_11647357.1| Ribosome recycling factor [Shigella boydii ATCC 9905]
gi|416294327|ref|ZP_11650812.1| Ribosome recycling factor [Shigella flexneri CDC 796-83]
gi|416314044|ref|ZP_11658502.1| Ribosome recycling factor [Escherichia coli O157:H7 str. 1044]
gi|416318946|ref|ZP_11661498.1| Ribosome recycling factor [Escherichia coli O157:H7 str. EC1212]
gi|416325836|ref|ZP_11666160.1| Ribosome recycling factor [Escherichia coli O157:H7 str. 1125]
gi|416334590|ref|ZP_11671423.1| Ribosome recycling factor [Escherichia coli WV_060327]
gi|416342922|ref|ZP_11676926.1| Ribosome recycling factor [Escherichia coli EC4100B]
gi|416777822|ref|ZP_11875462.1| ribosome recycling factor [Escherichia coli O157:H7 str. G5101]
gi|416790011|ref|ZP_11880907.1| ribosome recycling factor [Escherichia coli O157:H- str. 493-89]
gi|416795826|ref|ZP_11883368.1| ribosome recycling factor [Escherichia coli O157:H- str. H 2687]
gi|416807855|ref|ZP_11888194.1| ribosome recycling factor [Escherichia coli O55:H7 str. 3256-97]
gi|416819004|ref|ZP_11893074.1| ribosome recycling factor [Escherichia coli O55:H7 str. USDA 5905]
gi|416828341|ref|ZP_11897940.1| ribosome recycling factor [Escherichia coli O157:H7 str. LSU-61]
gi|416895520|ref|ZP_11925421.1| ribosome recycling factor [Escherichia coli STEC_7v]
gi|417082479|ref|ZP_11950813.1| Ribosome Recycling Factor [Escherichia coli cloneA_i1]
gi|417112339|ref|ZP_11964462.1| ribosome recycling factor [Escherichia coli 1.2741]
gi|417126923|ref|ZP_11974477.1| ribosome recycling factor [Escherichia coli 97.0246]
gi|417135665|ref|ZP_11980450.1| ribosome recycling factor [Escherichia coli 5.0588]
gi|417142840|ref|ZP_11985221.1| ribosome recycling factor [Escherichia coli 97.0259]
gi|417151483|ref|ZP_11991010.1| ribosome recycling factor [Escherichia coli 1.2264]
gi|417152466|ref|ZP_11991257.1| ribosome recycling factor [Escherichia coli 96.0497]
gi|417168498|ref|ZP_12000949.1| ribosome recycling factor [Escherichia coli 99.0741]
gi|417174144|ref|ZP_12003940.1| ribosome recycling factor [Escherichia coli 3.2608]
gi|417182038|ref|ZP_12008874.1| ribosome recycling factor [Escherichia coli 93.0624]
gi|417190832|ref|ZP_12013428.1| ribosome recycling factor [Escherichia coli 4.0522]
gi|417216900|ref|ZP_12023572.1| ribosome recycling factor [Escherichia coli JB1-95]
gi|417224548|ref|ZP_12027839.1| ribosome recycling factor [Escherichia coli 96.154]
gi|417230134|ref|ZP_12031720.1| ribosome recycling factor [Escherichia coli 5.0959]
gi|417244392|ref|ZP_12038402.1| ribosome recycling factor [Escherichia coli 9.0111]
gi|417253263|ref|ZP_12045022.1| ribosome recycling factor [Escherichia coli 4.0967]
gi|417260697|ref|ZP_12048195.1| ribosome recycling factor [Escherichia coli 2.3916]
gi|417269723|ref|ZP_12057083.1| ribosome recycling factor [Escherichia coli 3.3884]
gi|417273958|ref|ZP_12061303.1| ribosome recycling factor [Escherichia coli 2.4168]
gi|417279638|ref|ZP_12066944.1| ribosome recycling factor [Escherichia coli 3.2303]
gi|417284375|ref|ZP_12071670.1| ribosome recycling factor [Escherichia coli 3003]
gi|417288101|ref|ZP_12075387.1| ribosome recycling factor [Escherichia coli TW07793]
gi|417292964|ref|ZP_12080244.1| ribosome recycling factor [Escherichia coli B41]
gi|417295640|ref|ZP_12082893.1| ribosome recycling factor [Escherichia coli 900105 (10e)]
gi|417306701|ref|ZP_12093589.1| Ribosome recycling factor [Escherichia coli PCN033]
gi|417579390|ref|ZP_12230216.1| ribosome recycling factor [Escherichia coli STEC_B2F1]
gi|417584991|ref|ZP_12235774.1| ribosome recycling factor [Escherichia coli STEC_C165-02]
gi|417589792|ref|ZP_12240513.1| ribosome recycling factor [Escherichia coli 2534-86]
gi|417595020|ref|ZP_12245696.1| ribosome recycling factor [Escherichia coli 3030-1]
gi|417600434|ref|ZP_12251021.1| ribosome recycling factor [Escherichia coli STEC_94C]
gi|417611183|ref|ZP_12261659.1| ribosome recycling factor [Escherichia coli STEC_EH250]
gi|417621402|ref|ZP_12271733.1| ribosome recycling factor [Escherichia coli STEC_H.1.8]
gi|417632651|ref|ZP_12282874.1| ribosome recycling factor [Escherichia coli STEC_S1191]
gi|417637439|ref|ZP_12287620.1| ribosome recycling factor [Escherichia coli TX1999]
gi|417660804|ref|ZP_12310385.1| ribosome recycling factor [Escherichia coli AA86]
gi|417665241|ref|ZP_12314810.1| ribosome recycling factor [Escherichia coli STEC_O31]
gi|417680459|ref|ZP_12329846.1| ribosome recycling factor [Shigella boydii 3594-74]
gi|417687952|ref|ZP_12337204.1| ribosome recycling factor [Shigella boydii 5216-82]
gi|417700010|ref|ZP_12349158.1| ribosome recycling factor [Shigella flexneri K-218]
gi|417705665|ref|ZP_12354740.1| ribosome recycling factor [Shigella flexneri VA-6]
gi|417710804|ref|ZP_12359813.1| ribosome recycling factor [Shigella flexneri K-272]
gi|417715470|ref|ZP_12364408.1| ribosome recycling factor [Shigella flexneri K-227]
gi|417721178|ref|ZP_12370032.1| ribosome recycling factor [Shigella flexneri K-304]
gi|417726518|ref|ZP_12375268.1| ribosome recycling factor [Shigella flexneri K-671]
gi|417731674|ref|ZP_12380348.1| ribosome recycling factor [Shigella flexneri 2747-71]
gi|417737006|ref|ZP_12385619.1| ribosome recycling factor [Shigella flexneri 4343-70]
gi|417741656|ref|ZP_12390212.1| ribosome recycling factor [Shigella flexneri 2930-71]
gi|417753997|ref|ZP_12402094.1| ribosome recycling factor [Escherichia coli DEC2B]
gi|417803513|ref|ZP_12450553.1| ribosome recycling factor [Escherichia coli O104:H4 str. LB226692]
gi|417826186|ref|ZP_12472768.1| ribosome recycling factor [Shigella flexneri J1713]
gi|417831274|ref|ZP_12477802.1| ribosome recycling factor [Escherichia coli O104:H4 str. 01-09591]
gi|417864306|ref|ZP_12509352.1| frr [Escherichia coli O104:H4 str. C227-11]
gi|417944182|ref|ZP_12587426.1| ribosome recycling factor [Escherichia coli XH140A]
gi|417975918|ref|ZP_12616714.1| ribosome recycling factor [Escherichia coli XH001]
gi|418039541|ref|ZP_12677803.1| ribosome recycling factor [Escherichia coli W26]
gi|418252910|ref|ZP_12878332.1| ribosome recycling factor [Shigella flexneri 6603-63]
gi|418261641|ref|ZP_12883596.1| ribosome recycling factor [Shigella sonnei str. Moseley]
gi|418301059|ref|ZP_12912853.1| ribosome recycling factor [Escherichia coli UMNF18]
gi|418942298|ref|ZP_13495583.1| ribosome recycling factor [Escherichia coli O157:H43 str. T22]
gi|418959622|ref|ZP_13511520.1| ribosome recycling factor [Escherichia coli J53]
gi|418995226|ref|ZP_13542846.1| ribosome recycling factor [Escherichia coli DEC1A]
gi|419000339|ref|ZP_13547905.1| ribosome recycling factor [Escherichia coli DEC1B]
gi|419005896|ref|ZP_13553354.1| ribosome recycling factor [Escherichia coli DEC1C]
gi|419011730|ref|ZP_13559100.1| ribosome recycling factor [Escherichia coli DEC1D]
gi|419016668|ref|ZP_13563996.1| ribosome recycling factor [Escherichia coli DEC1E]
gi|419022258|ref|ZP_13569507.1| ribosome recycling factor [Escherichia coli DEC2A]
gi|419027151|ref|ZP_13574355.1| ribosome recycling factor [Escherichia coli DEC2C]
gi|419032934|ref|ZP_13580035.1| ribosome recycling factor [Escherichia coli DEC2D]
gi|419037933|ref|ZP_13584996.1| ribosome recycling factor [Escherichia coli DEC2E]
gi|419048536|ref|ZP_13595461.1| ribosome recycling factor [Escherichia coli DEC3A]
gi|419054823|ref|ZP_13601684.1| ribosome recycling factor [Escherichia coli DEC3C]
gi|419060378|ref|ZP_13607166.1| ribosome recycling factor [Escherichia coli DEC3D]
gi|419066210|ref|ZP_13612900.1| ribosome recycling factor [Escherichia coli DEC3E]
gi|419073220|ref|ZP_13618796.1| ribosome recycling factor [Escherichia coli DEC3F]
gi|419078445|ref|ZP_13623933.1| ribosome recycling factor [Escherichia coli DEC4A]
gi|419084094|ref|ZP_13629513.1| ribosome recycling factor [Escherichia coli DEC4B]
gi|419090143|ref|ZP_13635465.1| ribosome recycling factor [Escherichia coli DEC4C]
gi|419101419|ref|ZP_13646600.1| ribosome recycling factor [Escherichia coli DEC4D]
gi|419101732|ref|ZP_13646901.1| ribosome recycling factor [Escherichia coli DEC4E]
gi|419112825|ref|ZP_13657863.1| ribosome recycling factor [Escherichia coli DEC4F]
gi|419112994|ref|ZP_13658030.1| ribosome recycling factor [Escherichia coli DEC5A]
gi|419118501|ref|ZP_13663489.1| ribosome recycling factor [Escherichia coli DEC5B]
gi|419123973|ref|ZP_13668883.1| ribosome recycling factor [Escherichia coli DEC5C]
gi|419140137|ref|ZP_13684921.1| ribosome recycling factor [Escherichia coli DEC5E]
gi|419140542|ref|ZP_13685301.1| ribosome recycling factor [Escherichia coli DEC6A]
gi|419146179|ref|ZP_13690877.1| ribosome recycling factor [Escherichia coli DEC6B]
gi|419157429|ref|ZP_13701960.1| ribosome recycling factor [Escherichia coli DEC6D]
gi|419162435|ref|ZP_13706916.1| ribosome recycling factor [Escherichia coli DEC6E]
gi|419168142|ref|ZP_13712543.1| ribosome recycling factor [Escherichia coli DEC7A]
gi|419173497|ref|ZP_13717359.1| ribosome recycling factor [Escherichia coli DEC7B]
gi|419179193|ref|ZP_13722820.1| ribosome recycling factor [Escherichia coli DEC7C]
gi|419184652|ref|ZP_13728178.1| ribosome recycling factor [Escherichia coli DEC7D]
gi|419189920|ref|ZP_13733393.1| ribosome recycling factor [Escherichia coli DEC7E]
gi|419195130|ref|ZP_13738545.1| ribosome recycling factor [Escherichia coli DEC8A]
gi|419201185|ref|ZP_13744417.1| ribosome recycling factor [Escherichia coli DEC8B]
gi|419207123|ref|ZP_13750254.1| ribosome recycling factor [Escherichia coli DEC8C]
gi|419213546|ref|ZP_13756581.1| ribosome recycling factor [Escherichia coli DEC8D]
gi|419219385|ref|ZP_13762346.1| ribosome recycling factor [Escherichia coli DEC8E]
gi|419224818|ref|ZP_13767713.1| ribosome recycling factor [Escherichia coli DEC9A]
gi|419230603|ref|ZP_13773399.1| ribosome recycling factor [Escherichia coli DEC9B]
gi|419241571|ref|ZP_13784223.1| ribosome recycling factor [Escherichia coli DEC9D]
gi|419246975|ref|ZP_13789594.1| ribosome recycling factor [Escherichia coli DEC9E]
gi|419252810|ref|ZP_13795362.1| ribosome recycling factor [Escherichia coli DEC10A]
gi|419258753|ref|ZP_13801217.1| ribosome recycling factor [Escherichia coli DEC10B]
gi|419264541|ref|ZP_13806931.1| ribosome recycling factor [Escherichia coli DEC10C]
gi|419270356|ref|ZP_13812691.1| ribosome recycling factor [Escherichia coli DEC10D]
gi|419276276|ref|ZP_13818548.1| ribosome recycling factor [Escherichia coli DEC10E]
gi|419281803|ref|ZP_13824028.1| ribosome recycling factor [Escherichia coli DEC10F]
gi|419287683|ref|ZP_13829802.1| ribosome recycling factor [Escherichia coli DEC11A]
gi|419292981|ref|ZP_13835043.1| ribosome recycling factor [Escherichia coli DEC11B]
gi|419298362|ref|ZP_13840387.1| ribosome recycling factor [Escherichia coli DEC11C]
gi|419304678|ref|ZP_13846595.1| ribosome recycling factor [Escherichia coli DEC11D]
gi|419309713|ref|ZP_13851592.1| ribosome recycling factor [Escherichia coli DEC11E]
gi|419315016|ref|ZP_13856849.1| ribosome recycling factor [Escherichia coli DEC12A]
gi|419320813|ref|ZP_13862558.1| ribosome recycling factor [Escherichia coli DEC12B]
gi|419327015|ref|ZP_13868652.1| ribosome recycling factor [Escherichia coli DEC12C]
gi|419332432|ref|ZP_13873999.1| ribosome recycling factor [Escherichia coli DEC12D]
gi|419338184|ref|ZP_13879675.1| ribosome recycling factor [Escherichia coli DEC12E]
gi|419343839|ref|ZP_13885225.1| ribosome recycling factor [Escherichia coli DEC13A]
gi|419353163|ref|ZP_13894451.1| ribosome recycling factor [Escherichia coli DEC13C]
gi|419358508|ref|ZP_13899740.1| ribosome recycling factor [Escherichia coli DEC13D]
gi|419363500|ref|ZP_13904684.1| ribosome recycling factor [Escherichia coli DEC13E]
gi|419368451|ref|ZP_13909585.1| ribosome recycling factor [Escherichia coli DEC14A]
gi|419373609|ref|ZP_13914671.1| ribosome recycling factor [Escherichia coli DEC14B]
gi|419384292|ref|ZP_13925200.1| ribosome recycling factor [Escherichia coli DEC14D]
gi|419389587|ref|ZP_13930430.1| ribosome recycling factor [Escherichia coli DEC15A]
gi|419394759|ref|ZP_13935547.1| ribosome recycling factor [Escherichia coli DEC15B]
gi|419400151|ref|ZP_13940886.1| ribosome recycling factor [Escherichia coli DEC15C]
gi|419410482|ref|ZP_13951161.1| ribosome recycling factor [Escherichia coli DEC15D]
gi|419410800|ref|ZP_13951477.1| ribosome recycling factor [Escherichia coli DEC15E]
gi|419699101|ref|ZP_14226724.1| ribosome recycling factor [Escherichia coli SCI-07]
gi|419804912|ref|ZP_14330061.1| ribosome recycling factor [Escherichia coli AI27]
gi|419812924|ref|ZP_14337784.1| ribosome recycling factor [Escherichia coli O32:H37 str. P4]
gi|419865204|ref|ZP_14387593.1| ribosome recycling factor [Escherichia coli O103:H25 str. CVM9340]
gi|419870127|ref|ZP_14392264.1| ribosome recycling factor [Escherichia coli O103:H2 str. CVM9450]
gi|419875697|ref|ZP_14397522.1| ribosome recycling factor [Escherichia coli O111:H11 str. CVM9534]
gi|419880116|ref|ZP_14401525.1| ribosome recycling factor [Escherichia coli O111:H11 str. CVM9545]
gi|419891811|ref|ZP_14411852.1| ribosome recycling factor [Escherichia coli O111:H8 str. CVM9570]
gi|419893451|ref|ZP_14413435.1| ribosome recycling factor [Escherichia coli O111:H8 str. CVM9574]
gi|419904661|ref|ZP_14423652.1| ribosome recycling factor [Escherichia coli O26:H11 str. CVM9942]
gi|419906040|ref|ZP_14424974.1| ribosome recycling factor [Escherichia coli O26:H11 str. CVM10026]
gi|419912653|ref|ZP_14431101.1| ribosome recycling factor [Escherichia coli KD1]
gi|419918939|ref|ZP_14437111.1| ribosome recycling factor [Escherichia coli KD2]
gi|419921792|ref|ZP_14439828.1| ribosome recycling factor [Escherichia coli 541-15]
gi|419929366|ref|ZP_14447041.1| ribosome recycling factor [Escherichia coli 541-1]
gi|419935224|ref|ZP_14452309.1| ribosome recycling factor [Escherichia coli 576-1]
gi|419937854|ref|ZP_14454700.1| ribosome recycling factor [Escherichia coli 75]
gi|419942393|ref|ZP_14458996.1| ribosome recycling factor [Escherichia coli HM605]
gi|419951492|ref|ZP_14467683.1| ribosome recycling factor [Escherichia coli CUMT8]
gi|420087281|ref|ZP_14599252.1| ribosome recycling factor [Escherichia coli O111:H8 str. CVM9602]
gi|420092440|ref|ZP_14604142.1| ribosome recycling factor [Escherichia coli O111:H8 str. CVM9634]
gi|420100309|ref|ZP_14611489.1| ribosome recycling factor [Escherichia coli O111:H11 str. CVM9455]
gi|420105943|ref|ZP_14616375.1| ribosome recycling factor [Escherichia coli O111:H11 str. CVM9553]
gi|420113075|ref|ZP_14622840.1| ribosome recycling factor [Escherichia coli O26:H11 str. CVM10021]
gi|420119497|ref|ZP_14628773.1| ribosome recycling factor [Escherichia coli O26:H11 str. CVM10030]
gi|420125526|ref|ZP_14634328.1| ribosome recycling factor [Escherichia coli O26:H11 str. CVM10224]
gi|420132857|ref|ZP_14641160.1| ribosome recycling factor [Escherichia coli O26:H11 str. CVM9952]
gi|420267182|ref|ZP_14769593.1| ribosome recycling factor [Escherichia coli PA22]
gi|420273144|ref|ZP_14775479.1| ribosome recycling factor [Escherichia coli PA40]
gi|420283651|ref|ZP_14785876.1| ribosome recycling factor [Escherichia coli TW06591]
gi|420284205|ref|ZP_14786425.1| ribosome recycling factor [Escherichia coli TW10246]
gi|420290194|ref|ZP_14792363.1| ribosome recycling factor [Escherichia coli TW11039]
gi|420295916|ref|ZP_14798014.1| ribosome recycling factor [Escherichia coli TW09109]
gi|420301481|ref|ZP_14803516.1| ribosome recycling factor [Escherichia coli TW10119]
gi|420307475|ref|ZP_14809451.1| ribosome recycling factor [Escherichia coli EC1738]
gi|420312961|ref|ZP_14814876.1| ribosome recycling factor [Escherichia coli EC1734]
gi|420323828|ref|ZP_14825618.1| ribosome recycling factor [Shigella flexneri CCH060]
gi|420329324|ref|ZP_14831041.1| ribosome recycling factor [Shigella flexneri K-1770]
gi|420334433|ref|ZP_14836056.1| ribosome recycling factor [Shigella flexneri K-315]
gi|420339640|ref|ZP_14841177.1| ribosome recycling factor [Shigella flexneri K-404]
gi|420345264|ref|ZP_14846699.1| ribosome recycling factor [Shigella boydii 965-58]
gi|420351046|ref|ZP_14852249.1| ribosome recycling factor [Shigella boydii 4444-74]
gi|420356745|ref|ZP_14857770.1| ribosome recycling factor [Shigella sonnei 3226-85]
gi|420361727|ref|ZP_14862659.1| ribosome recycling factor [Shigella sonnei 4822-66]
gi|420369750|ref|ZP_14870423.1| ribosome recycling factor [Shigella flexneri 1235-66]
gi|420378515|ref|ZP_14878019.1| ribosome recycling factor [Shigella dysenteriae 225-75]
gi|420383811|ref|ZP_14883203.1| ribosome recycling factor [Escherichia coli EPECa12]
gi|420389502|ref|ZP_14888776.1| ribosome recycling factor [Escherichia coli EPEC C342-62]
gi|421680891|ref|ZP_16120733.1| ribosome recycling factor [Shigella flexneri 1485-80]
gi|421775125|ref|ZP_16211735.1| ribosome recycling factor [Escherichia coli AD30]
gi|421816391|ref|ZP_16251964.1| ribosome recycling factor [Escherichia coli 10.0821]
gi|421821785|ref|ZP_16257230.1| ribosome recycling factor [Escherichia coli FRIK920]
gi|421828537|ref|ZP_16263869.1| ribosome recycling factor [Escherichia coli PA7]
gi|422333332|ref|ZP_16414343.1| ribosome-recycling factor [Escherichia coli 4_1_47FAA]
gi|422354195|ref|ZP_16434937.1| ribosome recycling factor [Escherichia coli MS 117-3]
gi|422360930|ref|ZP_16441558.1| ribosome recycling factor [Escherichia coli MS 110-3]
gi|422362650|ref|ZP_16443211.1| ribosome recycling factor [Escherichia coli MS 153-1]
gi|422367562|ref|ZP_16447997.1| ribosome recycling factor [Escherichia coli MS 16-3]
gi|422374572|ref|ZP_16454850.1| ribosome recycling factor [Escherichia coli MS 60-1]
gi|422380527|ref|ZP_16460705.1| ribosome recycling factor [Escherichia coli MS 57-2]
gi|422750438|ref|ZP_16804348.1| ribosome recycling protein [Escherichia coli H252]
gi|422756513|ref|ZP_16810336.1| ribosome recycling protein [Escherichia coli H263]
gi|422761849|ref|ZP_16815607.1| ribosome recycling protein [Escherichia coli E1167]
gi|422768427|ref|ZP_16822152.1| ribosome recycling protein [Escherichia coli E1520]
gi|422772905|ref|ZP_16826591.1| ribosome recycling protein [Escherichia coli E482]
gi|422776810|ref|ZP_16830464.1| ribosome recycling protein [Escherichia coli H120]
gi|422783058|ref|ZP_16835842.1| ribosome recycling protein [Escherichia coli TW10509]
gi|422788408|ref|ZP_16841145.1| ribosome recycling protein [Escherichia coli H489]
gi|422792823|ref|ZP_16845522.1| ribosome recycling protein [Escherichia coli TA007]
gi|422802512|ref|ZP_16851005.1| ribosome recycling protein [Escherichia coli M863]
gi|422806606|ref|ZP_16855037.1| ribosome recycling protein [Escherichia fergusonii B253]
gi|422816187|ref|ZP_16864402.1| ribosome-recycling factor [Escherichia coli M919]
gi|422830336|ref|ZP_16878495.1| ribosome-recycling factor [Escherichia coli B093]
gi|422834462|ref|ZP_16882524.1| ribosome-recycling factor [Escherichia coli E101]
gi|422839827|ref|ZP_16887798.1| ribosome-recycling factor [Escherichia coli H397]
gi|422957488|ref|ZP_16969702.1| ribosome-recycling factor [Escherichia coli H494]
gi|422971426|ref|ZP_16974701.1| ribosome-recycling factor [Escherichia coli TA124]
gi|422990874|ref|ZP_16981645.1| ribosome-recycling factor [Escherichia coli O104:H4 str. C227-11]
gi|422992814|ref|ZP_16983578.1| ribosome-recycling factor [Escherichia coli O104:H4 str. C236-11]
gi|422998023|ref|ZP_16988779.1| ribosome-recycling factor [Escherichia coli O104:H4 str. 09-7901]
gi|423006507|ref|ZP_16997251.1| ribosome-recycling factor [Escherichia coli O104:H4 str. 04-8351]
gi|423008129|ref|ZP_16998867.1| ribosome-recycling factor [Escherichia coli O104:H4 str. 11-3677]
gi|423022315|ref|ZP_17013018.1| ribosome-recycling factor [Escherichia coli O104:H4 str. 11-4404]
gi|423027470|ref|ZP_17018163.1| ribosome-recycling factor [Escherichia coli O104:H4 str. 11-4522]
gi|423033307|ref|ZP_17023991.1| ribosome-recycling factor [Escherichia coli O104:H4 str. 11-4623]
gi|423036173|ref|ZP_17026847.1| ribosome-recycling factor [Escherichia coli O104:H4 str. 11-4632
C1]
gi|423041293|ref|ZP_17031960.1| ribosome-recycling factor [Escherichia coli O104:H4 str. 11-4632
C2]
gi|423047979|ref|ZP_17038636.1| ribosome-recycling factor [Escherichia coli O104:H4 str. 11-4632
C3]
gi|423056517|ref|ZP_17045322.1| ribosome-recycling factor [Escherichia coli O104:H4 str. 11-4632
C4]
gi|423058528|ref|ZP_17047324.1| ribosome-recycling factor [Escherichia coli O104:H4 str. 11-4632
C5]
gi|423652537|ref|ZP_17627941.1| ribosome recycling factor [Escherichia coli PA31]
gi|423700953|ref|ZP_17675412.1| ribosome-recycling factor [Escherichia coli H730]
gi|423709892|ref|ZP_17684246.1| ribosome-recycling factor [Escherichia coli B799]
gi|424074934|ref|ZP_17812326.1| ribosome recycling factor [Escherichia coli FDA505]
gi|424081183|ref|ZP_17818090.1| ribosome recycling factor [Escherichia coli FDA517]
gi|424094069|ref|ZP_17829882.1| ribosome recycling factor [Escherichia coli FRIK1985]
gi|424100482|ref|ZP_17835691.1| ribosome recycling factor [Escherichia coli FRIK1990]
gi|424107308|ref|ZP_17841929.1| ribosome recycling factor [Escherichia coli 93-001]
gi|424113281|ref|ZP_17847480.1| ribosome recycling factor [Escherichia coli PA3]
gi|424119409|ref|ZP_17853168.1| ribosome recycling factor [Escherichia coli PA5]
gi|424125626|ref|ZP_17858868.1| ribosome recycling factor [Escherichia coli PA9]
gi|424138247|ref|ZP_17870589.1| ribosome recycling factor [Escherichia coli PA14]
gi|424144701|ref|ZP_17876509.1| ribosome recycling factor [Escherichia coli PA15]
gi|424150846|ref|ZP_17882152.1| ribosome recycling factor [Escherichia coli PA24]
gi|424260198|ref|ZP_17893134.1| ribosome recycling factor [Escherichia coli PA25]
gi|424260884|ref|ZP_17893470.1| ribosome recycling factor [Escherichia coli PA28]
gi|424453245|ref|ZP_17904832.1| ribosome recycling factor [Escherichia coli PA33]
gi|424459523|ref|ZP_17910531.1| ribosome recycling factor [Escherichia coli PA39]
gi|424472585|ref|ZP_17922297.1| ribosome recycling factor [Escherichia coli PA42]
gi|424478555|ref|ZP_17927844.1| ribosome recycling factor [Escherichia coli TW07945]
gi|424484581|ref|ZP_17933500.1| ribosome recycling factor [Escherichia coli TW09098]
gi|424490676|ref|ZP_17939148.1| ribosome recycling factor [Escherichia coli TW09195]
gi|424497796|ref|ZP_17945119.1| ribosome recycling factor [Escherichia coli EC4203]
gi|424504042|ref|ZP_17950867.1| ribosome recycling factor [Escherichia coli EC4196]
gi|424510283|ref|ZP_17956586.1| ribosome recycling factor [Escherichia coli TW14313]
gi|424517865|ref|ZP_17962339.1| ribosome recycling factor [Escherichia coli TW14301]
gi|424523692|ref|ZP_17967759.1| ribosome recycling factor [Escherichia coli EC4421]
gi|424529899|ref|ZP_17973568.1| ribosome recycling factor [Escherichia coli EC4422]
gi|424535870|ref|ZP_17979178.1| ribosome recycling factor [Escherichia coli EC4013]
gi|424541757|ref|ZP_17984642.1| ribosome recycling factor [Escherichia coli EC4402]
gi|424548082|ref|ZP_17990344.1| ribosome recycling factor [Escherichia coli EC4439]
gi|424560717|ref|ZP_18002043.1| ribosome recycling factor [Escherichia coli EC4437]
gi|424566727|ref|ZP_18007693.1| ribosome recycling factor [Escherichia coli EC4448]
gi|424572926|ref|ZP_18013397.1| ribosome recycling factor [Escherichia coli EC1845]
gi|424584753|ref|ZP_18024373.1| ribosome recycling factor [Escherichia coli EC1863]
gi|424746712|ref|ZP_18174934.1| ribosome recycling factor [Escherichia coli O26:H11 str.
CFSAN001629]
gi|424756649|ref|ZP_18184455.1| ribosome recycling factor [Escherichia coli O111:H11 str.
CFSAN001630]
gi|424774775|ref|ZP_18201785.1| ribosome recycling factor [Escherichia coli O111:H8 str.
CFSAN001632]
gi|424815084|ref|ZP_18240235.1| ribosome recycling factor [Escherichia fergusonii ECD227]
gi|424836691|ref|ZP_18261328.1| ribosome recycling factor [Shigella flexneri 5a str. M90T]
gi|425095567|ref|ZP_18498627.1| ribosome recycling factor [Escherichia coli 3.4870]
gi|425101651|ref|ZP_18504339.1| ribosome recycling factor [Escherichia coli 5.2239]
gi|425118244|ref|ZP_18519998.1| ribosome recycling factor [Escherichia coli 8.0569]
gi|425123321|ref|ZP_18524936.1| ribosome recycling factor [Escherichia coli 8.0586]
gi|425129346|ref|ZP_18530489.1| ribosome recycling factor [Escherichia coli 8.2524]
gi|425135689|ref|ZP_18536458.1| ribosome recycling factor [Escherichia coli 10.0833]
gi|425147912|ref|ZP_18547849.1| ribosome recycling factor [Escherichia coli 88.0221]
gi|425153526|ref|ZP_18553113.1| ribosome recycling factor [Escherichia coli PA34]
gi|425165503|ref|ZP_18564346.1| ribosome recycling factor [Escherichia coli FDA507]
gi|425171789|ref|ZP_18570226.1| ribosome recycling factor [Escherichia coli FDA504]
gi|425177591|ref|ZP_18575678.1| ribosome recycling factor [Escherichia coli FRIK1999]
gi|425203543|ref|ZP_18599705.1| ribosome recycling factor [Escherichia coli FRIK2001]
gi|425215356|ref|ZP_18610710.1| ribosome recycling factor [Escherichia coli PA23]
gi|425221922|ref|ZP_18616817.1| ribosome recycling factor [Escherichia coli PA49]
gi|425228174|ref|ZP_18622606.1| ribosome recycling factor [Escherichia coli PA45]
gi|425234473|ref|ZP_18628467.1| ribosome recycling factor [Escherichia coli TT12B]
gi|425240450|ref|ZP_18634119.1| ribosome recycling factor [Escherichia coli MA6]
gi|425246528|ref|ZP_18639767.1| ribosome recycling factor [Escherichia coli 5905]
gi|425252318|ref|ZP_18645237.1| ribosome recycling factor [Escherichia coli CB7326]
gi|425258652|ref|ZP_18651057.1| ribosome recycling factor [Escherichia coli EC96038]
gi|425264767|ref|ZP_18656723.1| ribosome recycling factor [Escherichia coli 5412]
gi|425270881|ref|ZP_18662406.1| ribosome recycling factor [Escherichia coli TW15901]
gi|425286686|ref|ZP_18677640.1| ribosome recycling factor [Escherichia coli 3006]
gi|425292150|ref|ZP_18682788.1| ribosome recycling factor [Escherichia coli PA38]
gi|425303684|ref|ZP_18693499.1| ribosome recycling factor [Escherichia coli N1]
gi|425308929|ref|ZP_18698441.1| ribosome recycling factor [Escherichia coli EC1735]
gi|425314856|ref|ZP_18703974.1| ribosome recycling factor [Escherichia coli EC1736]
gi|425327093|ref|ZP_18715365.1| ribosome recycling factor [Escherichia coli EC1846]
gi|425333282|ref|ZP_18721051.1| ribosome recycling factor [Escherichia coli EC1847]
gi|425339702|ref|ZP_18726983.1| ribosome recycling factor [Escherichia coli EC1848]
gi|425345579|ref|ZP_18732427.1| ribosome recycling factor [Escherichia coli EC1849]
gi|425351796|ref|ZP_18738217.1| ribosome recycling factor [Escherichia coli EC1850]
gi|425357780|ref|ZP_18743794.1| ribosome recycling factor [Escherichia coli EC1856]
gi|425363894|ref|ZP_18749496.1| ribosome recycling factor [Escherichia coli EC1862]
gi|425370329|ref|ZP_18755335.1| ribosome recycling factor [Escherichia coli EC1864]
gi|425376912|ref|ZP_18761344.1| ribosome recycling factor [Escherichia coli EC1865]
gi|425389181|ref|ZP_18772715.1| ribosome recycling factor [Escherichia coli EC1866]
gi|425389826|ref|ZP_18773321.1| ribosome recycling factor [Escherichia coli EC1868]
gi|425395949|ref|ZP_18779029.1| ribosome recycling factor [Escherichia coli EC1869]
gi|425408105|ref|ZP_18790297.1| ribosome recycling factor [Escherichia coli EC1870]
gi|425408481|ref|ZP_18790670.1| ribosome recycling factor [Escherichia coli NE098]
gi|425414750|ref|ZP_18796421.1| ribosome recycling factor [Escherichia coli FRIK523]
gi|425420771|ref|ZP_18802015.1| ribosome recycling factor [Escherichia coli 0.1288]
gi|425425899|ref|ZP_18806984.1| ribosome recycling factor [Escherichia coli 0.1304]
gi|427803245|ref|ZP_18970312.1| ribosome releasing factor [Escherichia coli chi7122]
gi|427807850|ref|ZP_18974915.1| ribosome releasing factor [Escherichia coli]
gi|428944531|ref|ZP_19017223.1| ribosome recycling factor [Escherichia coli 88.1467]
gi|428950704|ref|ZP_19022885.1| ribosome recycling factor [Escherichia coli 88.1042]
gi|428956551|ref|ZP_19028299.1| ribosome recycling factor [Escherichia coli 89.0511]
gi|428962918|ref|ZP_19034139.1| ribosome recycling factor [Escherichia coli 90.0091]
gi|428968925|ref|ZP_19039592.1| ribosome recycling factor [Escherichia coli 90.0039]
gi|428975483|ref|ZP_19045694.1| ribosome recycling factor [Escherichia coli 90.2281]
gi|428981083|ref|ZP_19050854.1| ribosome recycling factor [Escherichia coli 93.0055]
gi|428987507|ref|ZP_19056834.1| ribosome recycling factor [Escherichia coli 93.0056]
gi|428993317|ref|ZP_19062261.1| ribosome recycling factor [Escherichia coli 94.0618]
gi|428999407|ref|ZP_19067957.1| ribosome recycling factor [Escherichia coli 95.0183]
gi|429005645|ref|ZP_19073614.1| ribosome recycling factor [Escherichia coli 95.1288]
gi|429018208|ref|ZP_19085024.1| ribosome recycling factor [Escherichia coli 96.0428]
gi|429023889|ref|ZP_19090340.1| ribosome recycling factor [Escherichia coli 96.0427]
gi|429030192|ref|ZP_19096101.1| ribosome recycling factor [Escherichia coli 96.0939]
gi|429036346|ref|ZP_19101825.1| ribosome recycling factor [Escherichia coli 96.0932]
gi|429042273|ref|ZP_19107311.1| ribosome recycling factor [Escherichia coli 96.0107]
gi|429048150|ref|ZP_19112818.1| ribosome recycling factor [Escherichia coli 97.0003]
gi|429053513|ref|ZP_19118029.1| ribosome recycling factor [Escherichia coli 97.1742]
gi|429064595|ref|ZP_19128495.1| ribosome recycling factor [Escherichia coli 99.0672]
gi|429071214|ref|ZP_19134582.1| ribosome recycling factor [Escherichia coli 99.0678]
gi|429076444|ref|ZP_19139674.1| ribosome recycling factor [Escherichia coli 99.0713]
gi|429722372|ref|ZP_19257271.1| ribosome-recycling factor [Escherichia coli O104:H4 str. Ec11-9450]
gi|429774450|ref|ZP_19306454.1| ribosome-recycling factor [Escherichia coli O104:H4 str. 11-02030]
gi|429779710|ref|ZP_19311666.1| ribosome-recycling factor [Escherichia coli O104:H4 str.
11-02033-1]
gi|429783765|ref|ZP_19315679.1| ribosome-recycling factor [Escherichia coli O104:H4 str. 11-02092]
gi|429789103|ref|ZP_19320979.1| ribosome-recycling factor [Escherichia coli O104:H4 str. 11-02093]
gi|429795333|ref|ZP_19327160.1| ribosome-recycling factor [Escherichia coli O104:H4 str. 11-02281]
gi|429801259|ref|ZP_19333038.1| ribosome-recycling factor [Escherichia coli O104:H4 str. 11-02318]
gi|429804891|ref|ZP_19336639.1| ribosome-recycling factor [Escherichia coli O104:H4 str. 11-02913]
gi|429809702|ref|ZP_19341405.1| ribosome-recycling factor [Escherichia coli O104:H4 str. 11-03439]
gi|429815462|ref|ZP_19347122.1| ribosome-recycling factor [Escherichia coli O104:H4 str. 11-04080]
gi|429820673|ref|ZP_19352288.1| ribosome-recycling factor [Escherichia coli O104:H4 str. 11-03943]
gi|429823656|ref|ZP_19355213.1| ribosome recycling factor [Escherichia coli 96.0109]
gi|429830027|ref|ZP_19360944.1| ribosome recycling factor [Escherichia coli 97.0010]
gi|429906724|ref|ZP_19372694.1| ribosome-recycling factor [Escherichia coli O104:H4 str. Ec11-9990]
gi|429910919|ref|ZP_19376876.1| ribosome-recycling factor [Escherichia coli O104:H4 str. Ec11-9941]
gi|429916759|ref|ZP_19382700.1| ribosome-recycling factor [Escherichia coli O104:H4 str. Ec11-4984]
gi|429921797|ref|ZP_19387719.1| ribosome-recycling factor [Escherichia coli O104:H4 str. Ec11-5604]
gi|429927614|ref|ZP_19393521.1| ribosome-recycling factor [Escherichia coli O104:H4 str. Ec11-4986]
gi|429931547|ref|ZP_19397443.1| ribosome-recycling factor [Escherichia coli O104:H4 str. Ec11-4987]
gi|429938090|ref|ZP_19403971.1| ribosome-recycling factor [Escherichia coli O104:H4 str. Ec11-4988]
gi|429938805|ref|ZP_19404679.1| ribosome-recycling factor [Escherichia coli O104:H4 str. Ec11-5603]
gi|429946446|ref|ZP_19412302.1| ribosome-recycling factor [Escherichia coli O104:H4 str. Ec11-6006]
gi|429949094|ref|ZP_19414942.1| ribosome-recycling factor [Escherichia coli O104:H4 str. Ec12-0465]
gi|429957361|ref|ZP_19423190.1| ribosome-recycling factor [Escherichia coli O104:H4 str. Ec12-0466]
gi|432351804|ref|ZP_19595117.1| ribosome-recycling factor [Escherichia coli KTE2]
gi|432356531|ref|ZP_19599779.1| ribosome-recycling factor [Escherichia coli KTE4]
gi|432366029|ref|ZP_19609164.1| ribosome-recycling factor [Escherichia coli KTE5]
gi|432368163|ref|ZP_19611271.1| ribosome-recycling factor [Escherichia coli KTE10]
gi|432379787|ref|ZP_19622762.1| ribosome-recycling factor [Escherichia coli KTE12]
gi|432384728|ref|ZP_19627641.1| ribosome-recycling factor [Escherichia coli KTE15]
gi|432385557|ref|ZP_19628459.1| ribosome-recycling factor [Escherichia coli KTE16]
gi|432390065|ref|ZP_19632931.1| ribosome-recycling factor [Escherichia coli KTE21]
gi|432396026|ref|ZP_19638819.1| ribosome-recycling factor [Escherichia coli KTE25]
gi|432400250|ref|ZP_19643011.1| ribosome-recycling factor [Escherichia coli KTE26]
gi|432405059|ref|ZP_19647783.1| ribosome-recycling factor [Escherichia coli KTE28]
gi|432410173|ref|ZP_19652860.1| ribosome-recycling factor [Escherichia coli KTE39]
gi|432415123|ref|ZP_19657758.1| ribosome-recycling factor [Escherichia coli KTE44]
gi|432420295|ref|ZP_19662854.1| ribosome-recycling factor [Escherichia coli KTE178]
gi|432429281|ref|ZP_19671747.1| ribosome-recycling factor [Escherichia coli KTE181]
gi|432430332|ref|ZP_19672782.1| ribosome-recycling factor [Escherichia coli KTE187]
gi|432434720|ref|ZP_19677131.1| ribosome-recycling factor [Escherichia coli KTE188]
gi|432439507|ref|ZP_19681872.1| ribosome-recycling factor [Escherichia coli KTE189]
gi|432444630|ref|ZP_19686941.1| ribosome-recycling factor [Escherichia coli KTE191]
gi|432452925|ref|ZP_19695172.1| ribosome-recycling factor [Escherichia coli KTE193]
gi|432454949|ref|ZP_19697161.1| ribosome-recycling factor [Escherichia coli KTE201]
gi|432464023|ref|ZP_19706143.1| ribosome-recycling factor [Escherichia coli KTE204]
gi|432469093|ref|ZP_19711156.1| ribosome-recycling factor [Escherichia coli KTE205]
gi|432469504|ref|ZP_19711560.1| ribosome-recycling factor [Escherichia coli KTE206]
gi|432474167|ref|ZP_19716184.1| ribosome-recycling factor [Escherichia coli KTE208]
gi|432479495|ref|ZP_19721461.1| ribosome-recycling factor [Escherichia coli KTE210]
gi|432483813|ref|ZP_19725742.1| ribosome-recycling factor [Escherichia coli KTE212]
gi|432492474|ref|ZP_19734319.1| ribosome-recycling factor [Escherichia coli KTE213]
gi|432493999|ref|ZP_19735821.1| ribosome-recycling factor [Escherichia coli KTE214]
gi|432498471|ref|ZP_19740252.1| ribosome-recycling factor [Escherichia coli KTE216]
gi|432510404|ref|ZP_19749264.1| ribosome-recycling factor [Escherichia coli KTE220]
gi|432512369|ref|ZP_19749616.1| ribosome-recycling factor [Escherichia coli KTE224]
gi|432520819|ref|ZP_19757990.1| ribosome-recycling factor [Escherichia coli KTE228]
gi|432522313|ref|ZP_19759458.1| ribosome-recycling factor [Escherichia coli KTE230]
gi|432529472|ref|ZP_19766530.1| ribosome-recycling factor [Escherichia coli KTE233]
gi|432532385|ref|ZP_19769393.1| ribosome-recycling factor [Escherichia coli KTE234]
gi|432540993|ref|ZP_19777873.1| ribosome-recycling factor [Escherichia coli KTE235]
gi|432546488|ref|ZP_19783300.1| ribosome-recycling factor [Escherichia coli KTE236]
gi|432546893|ref|ZP_19783693.1| ribosome-recycling factor [Escherichia coli KTE237]
gi|432552209|ref|ZP_19788943.1| ribosome-recycling factor [Escherichia coli KTE47]
gi|432557202|ref|ZP_19793896.1| ribosome-recycling factor [Escherichia coli KTE49]
gi|432562092|ref|ZP_19798725.1| ribosome-recycling factor [Escherichia coli KTE51]
gi|432567044|ref|ZP_19803576.1| ribosome-recycling factor [Escherichia coli KTE53]
gi|432572065|ref|ZP_19808559.1| ribosome-recycling factor [Escherichia coli KTE55]
gi|432578884|ref|ZP_19815320.1| ribosome-recycling factor [Escherichia coli KTE56]
gi|432581364|ref|ZP_19817782.1| ribosome-recycling factor [Escherichia coli KTE57]
gi|432586501|ref|ZP_19822874.1| ribosome-recycling factor [Escherichia coli KTE58]
gi|432591174|ref|ZP_19827507.1| ribosome-recycling factor [Escherichia coli KTE60]
gi|432596070|ref|ZP_19832360.1| ribosome-recycling factor [Escherichia coli KTE62]
gi|432600681|ref|ZP_19836937.1| ribosome-recycling factor [Escherichia coli KTE66]
gi|432606037|ref|ZP_19842237.1| ribosome-recycling factor [Escherichia coli KTE67]
gi|432609877|ref|ZP_19846053.1| ribosome-recycling factor [Escherichia coli KTE72]
gi|432614974|ref|ZP_19851111.1| ribosome-recycling factor [Escherichia coli KTE75]
gi|432625137|ref|ZP_19861136.1| ribosome-recycling factor [Escherichia coli KTE76]
gi|432625730|ref|ZP_19861719.1| ribosome-recycling factor [Escherichia coli KTE77]
gi|432634616|ref|ZP_19870523.1| ribosome-recycling factor [Escherichia coli KTE80]
gi|432635490|ref|ZP_19871380.1| ribosome-recycling factor [Escherichia coli KTE81]
gi|432644207|ref|ZP_19880021.1| ribosome-recycling factor [Escherichia coli KTE83]
gi|432644580|ref|ZP_19880387.1| ribosome-recycling factor [Escherichia coli KTE86]
gi|432649541|ref|ZP_19885311.1| ribosome-recycling factor [Escherichia coli KTE87]
gi|432654214|ref|ZP_19889936.1| ribosome-recycling factor [Escherichia coli KTE93]
gi|432659438|ref|ZP_19895103.1| ribosome-recycling factor [Escherichia coli KTE111]
gi|432664327|ref|ZP_19899929.1| ribosome-recycling factor [Escherichia coli KTE116]
gi|432668993|ref|ZP_19904548.1| ribosome-recycling factor [Escherichia coli KTE119]
gi|432677767|ref|ZP_19913197.1| ribosome-recycling factor [Escherichia coli KTE142]
gi|432678584|ref|ZP_19913989.1| ribosome-recycling factor [Escherichia coli KTE143]
gi|432684051|ref|ZP_19919374.1| ribosome-recycling factor [Escherichia coli KTE156]
gi|432689955|ref|ZP_19925209.1| ribosome-recycling factor [Escherichia coli KTE161]
gi|432692859|ref|ZP_19928079.1| ribosome-recycling factor [Escherichia coli KTE162]
gi|432697478|ref|ZP_19932654.1| ribosome-recycling factor [Escherichia coli KTE169]
gi|432702714|ref|ZP_19937846.1| ribosome-recycling factor [Escherichia coli KTE171]
gi|432709017|ref|ZP_19944086.1| ribosome-recycling factor [Escherichia coli KTE6]
gi|432711859|ref|ZP_19946913.1| ribosome-recycling factor [Escherichia coli KTE8]
gi|432717184|ref|ZP_19952188.1| ribosome-recycling factor [Escherichia coli KTE9]
gi|432721772|ref|ZP_19956701.1| ribosome-recycling factor [Escherichia coli KTE17]
gi|432726182|ref|ZP_19961071.1| ribosome-recycling factor [Escherichia coli KTE18]
gi|432730893|ref|ZP_19965754.1| ribosome-recycling factor [Escherichia coli KTE45]
gi|432735635|ref|ZP_19970427.1| ribosome-recycling factor [Escherichia coli KTE42]
gi|432739950|ref|ZP_19974673.1| ribosome-recycling factor [Escherichia coli KTE23]
gi|432744097|ref|ZP_19978806.1| ribosome-recycling factor [Escherichia coli KTE43]
gi|432752997|ref|ZP_19987568.1| ribosome-recycling factor [Escherichia coli KTE29]
gi|432757686|ref|ZP_19992220.1| ribosome-recycling factor [Escherichia coli KTE22]
gi|432762444|ref|ZP_19996908.1| ribosome-recycling factor [Escherichia coli KTE46]
gi|432763454|ref|ZP_19997911.1| ribosome-recycling factor [Escherichia coli KTE48]
gi|432768979|ref|ZP_20003358.1| ribosome-recycling factor [Escherichia coli KTE50]
gi|432773322|ref|ZP_20007624.1| ribosome-recycling factor [Escherichia coli KTE54]
gi|432777055|ref|ZP_20011311.1| ribosome-recycling factor [Escherichia coli KTE59]
gi|432782059|ref|ZP_20016246.1| ribosome-recycling factor [Escherichia coli KTE63]
gi|432790755|ref|ZP_20024876.1| ribosome-recycling factor [Escherichia coli KTE65]
gi|432791397|ref|ZP_20025494.1| ribosome-recycling factor [Escherichia coli KTE78]
gi|432797367|ref|ZP_20031396.1| ribosome-recycling factor [Escherichia coli KTE79]
gi|432808804|ref|ZP_20042714.1| ribosome-recycling factor [Escherichia coli KTE91]
gi|432812321|ref|ZP_20046171.1| ribosome-recycling factor [Escherichia coli KTE101]
gi|432818391|ref|ZP_20052118.1| ribosome-recycling factor [Escherichia coli KTE115]
gi|432819522|ref|ZP_20053237.1| ribosome-recycling factor [Escherichia coli KTE118]
gi|432825651|ref|ZP_20059308.1| ribosome-recycling factor [Escherichia coli KTE123]
gi|432830146|ref|ZP_20063756.1| ribosome-recycling factor [Escherichia coli KTE135]
gi|432833272|ref|ZP_20066821.1| ribosome-recycling factor [Escherichia coli KTE136]
gi|432837730|ref|ZP_20071226.1| ribosome-recycling factor [Escherichia coli KTE140]
gi|432842433|ref|ZP_20075861.1| ribosome-recycling factor [Escherichia coli KTE141]
gi|432856980|ref|ZP_20084231.1| ribosome-recycling factor [Escherichia coli KTE144]
gi|432858475|ref|ZP_20084971.1| ribosome-recycling factor [Escherichia coli KTE146]
gi|432872714|ref|ZP_20092530.1| ribosome-recycling factor [Escherichia coli KTE147]
gi|432879427|ref|ZP_20096454.1| ribosome-recycling factor [Escherichia coli KTE154]
gi|432883861|ref|ZP_20099064.1| ribosome-recycling factor [Escherichia coli KTE158]
gi|432892747|ref|ZP_20104914.1| ribosome-recycling factor [Escherichia coli KTE165]
gi|432896843|ref|ZP_20107937.1| ribosome-recycling factor [Escherichia coli KTE192]
gi|432902472|ref|ZP_20112220.1| ribosome-recycling factor [Escherichia coli KTE194]
gi|432909728|ref|ZP_20117001.1| ribosome-recycling factor [Escherichia coli KTE190]
gi|432917159|ref|ZP_20121830.1| ribosome-recycling factor [Escherichia coli KTE173]
gi|432924454|ref|ZP_20126741.1| ribosome-recycling factor [Escherichia coli KTE175]
gi|432932431|ref|ZP_20132333.1| ribosome-recycling factor [Escherichia coli KTE184]
gi|432941866|ref|ZP_20139364.1| ribosome-recycling factor [Escherichia coli KTE183]
gi|432944736|ref|ZP_20141146.1| ribosome-recycling factor [Escherichia coli KTE196]
gi|432952828|ref|ZP_20145571.1| ribosome-recycling factor [Escherichia coli KTE197]
gi|432958899|ref|ZP_20149757.1| ribosome-recycling factor [Escherichia coli KTE202]
gi|432966312|ref|ZP_20155232.1| ribosome-recycling factor [Escherichia coli KTE203]
gi|432970308|ref|ZP_20159190.1| ribosome-recycling factor [Escherichia coli KTE207]
gi|432976876|ref|ZP_20165703.1| ribosome-recycling factor [Escherichia coli KTE209]
gi|432979559|ref|ZP_20168347.1| ribosome-recycling factor [Escherichia coli KTE211]
gi|432983894|ref|ZP_20172636.1| ribosome-recycling factor [Escherichia coli KTE215]
gi|432989116|ref|ZP_20177789.1| ribosome-recycling factor [Escherichia coli KTE217]
gi|432993928|ref|ZP_20182549.1| ribosome-recycling factor [Escherichia coli KTE218]
gi|432998346|ref|ZP_20186896.1| ribosome-recycling factor [Escherichia coli KTE223]
gi|433003713|ref|ZP_20192152.1| ribosome-recycling factor [Escherichia coli KTE227]
gi|433010920|ref|ZP_20199325.1| ribosome-recycling factor [Escherichia coli KTE229]
gi|433012345|ref|ZP_20200734.1| ribosome-recycling factor [Escherichia coli KTE104]
gi|433017144|ref|ZP_20205420.1| ribosome-recycling factor [Escherichia coli KTE105]
gi|433026540|ref|ZP_20214494.1| ribosome-recycling factor [Escherichia coli KTE106]
gi|433027190|ref|ZP_20215070.1| ribosome-recycling factor [Escherichia coli KTE109]
gi|433031577|ref|ZP_20219402.1| ribosome-recycling factor [Escherichia coli KTE112]
gi|433037097|ref|ZP_20224725.1| ribosome-recycling factor [Escherichia coli KTE113]
gi|433041666|ref|ZP_20229205.1| ribosome-recycling factor [Escherichia coli KTE117]
gi|433046221|ref|ZP_20233665.1| ribosome-recycling factor [Escherichia coli KTE120]
gi|433051385|ref|ZP_20238634.1| ribosome-recycling factor [Escherichia coli KTE122]
gi|433056497|ref|ZP_20243598.1| ribosome-recycling factor [Escherichia coli KTE124]
gi|433061378|ref|ZP_20248352.1| ribosome-recycling factor [Escherichia coli KTE125]
gi|433066291|ref|ZP_20253146.1| ribosome-recycling factor [Escherichia coli KTE128]
gi|433071083|ref|ZP_20257800.1| ribosome-recycling factor [Escherichia coli KTE129]
gi|433076330|ref|ZP_20262910.1| ribosome-recycling factor [Escherichia coli KTE131]
gi|433081076|ref|ZP_20267556.1| ribosome-recycling factor [Escherichia coli KTE133]
gi|433085823|ref|ZP_20272233.1| ribosome-recycling factor [Escherichia coli KTE137]
gi|433090518|ref|ZP_20276831.1| ribosome-recycling factor [Escherichia coli KTE138]
gi|433095052|ref|ZP_20281278.1| ribosome-recycling factor [Escherichia coli KTE139]
gi|433099710|ref|ZP_20285831.1| ribosome-recycling factor [Escherichia coli KTE145]
gi|433104355|ref|ZP_20290380.1| ribosome-recycling factor [Escherichia coli KTE148]
gi|433109351|ref|ZP_20295235.1| ribosome-recycling factor [Escherichia coli KTE150]
gi|433114108|ref|ZP_20299933.1| ribosome-recycling factor [Escherichia coli KTE153]
gi|433118649|ref|ZP_20304372.1| ribosome-recycling factor [Escherichia coli KTE157]
gi|433123769|ref|ZP_20309368.1| ribosome-recycling factor [Escherichia coli KTE160]
gi|433128458|ref|ZP_20313946.1| ribosome-recycling factor [Escherichia coli KTE163]
gi|433133359|ref|ZP_20318745.1| ribosome-recycling factor [Escherichia coli KTE166]
gi|433137838|ref|ZP_20323132.1| ribosome-recycling factor [Escherichia coli KTE167]
gi|433142670|ref|ZP_20327856.1| ribosome-recycling factor [Escherichia coli KTE168]
gi|433147590|ref|ZP_20332677.1| ribosome-recycling factor [Escherichia coli KTE174]
gi|433152307|ref|ZP_20337281.1| ribosome-recycling factor [Escherichia coli KTE176]
gi|433157108|ref|ZP_20341991.1| ribosome-recycling factor [Escherichia coli KTE177]
gi|433161953|ref|ZP_20346723.1| ribosome-recycling factor [Escherichia coli KTE179]
gi|433166888|ref|ZP_20351574.1| ribosome-recycling factor [Escherichia coli KTE180]
gi|433171937|ref|ZP_20356507.1| ribosome-recycling factor [Escherichia coli KTE232]
gi|433176531|ref|ZP_20361011.1| ribosome-recycling factor [Escherichia coli KTE82]
gi|433181613|ref|ZP_20365925.1| ribosome-recycling factor [Escherichia coli KTE85]
gi|433191493|ref|ZP_20375560.1| ribosome-recycling factor [Escherichia coli KTE88]
gi|433191960|ref|ZP_20375993.1| ribosome-recycling factor [Escherichia coli KTE90]
gi|433196741|ref|ZP_20380679.1| ribosome-recycling factor [Escherichia coli KTE94]
gi|433201611|ref|ZP_20385428.1| ribosome-recycling factor [Escherichia coli KTE95]
gi|433206342|ref|ZP_20390051.1| ribosome-recycling factor [Escherichia coli KTE97]
gi|433211090|ref|ZP_20394714.1| ribosome-recycling factor [Escherichia coli KTE99]
gi|433325057|ref|ZP_20402274.1| ribosome recycling factor [Escherichia coli J96]
gi|442590838|ref|ZP_21009593.1| Ribosome recycling factor [Escherichia coli O10:K5(L):H4 str. ATCC
23506]
gi|442597811|ref|ZP_21015589.1| Ribosome recycling factor [Escherichia coli O5:K4(L):H4 str. ATCC
23502]
gi|442607297|ref|ZP_21022074.1| Ribosome recycling factor [Escherichia coli Nissle 1917]
gi|443616183|ref|YP_007380039.1| ribosome recycling factor [Escherichia coli APEC O78]
gi|444922371|ref|ZP_21242135.1| ribosome recycling factor [Escherichia coli 09BKT078844]
gi|444928688|ref|ZP_21247860.1| ribosome recycling factor [Escherichia coli 99.0814]
gi|444934087|ref|ZP_21253051.1| ribosome recycling factor [Escherichia coli 99.0815]
gi|444939655|ref|ZP_21258325.1| ribosome recycling factor [Escherichia coli 99.0816]
gi|444945183|ref|ZP_21263621.1| ribosome recycling factor [Escherichia coli 99.0839]
gi|444950778|ref|ZP_21269022.1| ribosome recycling factor [Escherichia coli 99.0848]
gi|444972820|ref|ZP_21290124.1| ribosome recycling factor [Escherichia coli 99.1805]
gi|444978329|ref|ZP_21295337.1| ribosome recycling factor [Escherichia coli ATCC 700728]
gi|444983651|ref|ZP_21300527.1| ribosome recycling factor [Escherichia coli PA11]
gi|444988892|ref|ZP_21305643.1| ribosome recycling factor [Escherichia coli PA19]
gi|444994205|ref|ZP_21310816.1| ribosome recycling factor [Escherichia coli PA13]
gi|444999722|ref|ZP_21316197.1| ribosome recycling factor [Escherichia coli PA2]
gi|445005183|ref|ZP_21321537.1| ribosome recycling factor [Escherichia coli PA47]
gi|445010361|ref|ZP_21326567.1| ribosome recycling factor [Escherichia coli PA48]
gi|445016124|ref|ZP_21332185.1| ribosome recycling factor [Escherichia coli PA8]
gi|445026840|ref|ZP_21342629.1| ribosome recycling factor [Escherichia coli 99.1781]
gi|445032313|ref|ZP_21347951.1| ribosome recycling factor [Escherichia coli 99.1762]
gi|445038009|ref|ZP_21353492.1| ribosome recycling factor [Escherichia coli PA35]
gi|445043180|ref|ZP_21358529.1| ribosome recycling factor [Escherichia coli 3.4880]
gi|445048832|ref|ZP_21364015.1| ribosome recycling factor [Escherichia coli 95.0083]
gi|445054452|ref|ZP_21369414.1| ribosome recycling factor [Escherichia coli 99.0670]
gi|450185108|ref|ZP_21888955.1| ribosome recycling factor [Escherichia coli SEPT362]
gi|450209545|ref|ZP_21893960.1| ribosome recycling factor [Escherichia coli O08]
gi|450238440|ref|ZP_21898868.1| ribosome recycling factor [Escherichia coli S17]
gi|452969983|ref|ZP_21968210.1| ribosome recycling factor [Escherichia coli O157:H7 str. EC4009]
gi|67472290|sp|P0A805.1|RRF_ECOLI RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|67472291|sp|P0A806.1|RRF_ECOL6 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|67472292|sp|P0A807.1|RRF_ECO57 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|67472293|sp|P0A808.1|RRF_SHIFL RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|122424957|sp|Q1RG17.1|RRF_ECOUT RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|123147265|sp|Q0T837.1|RRF_SHIF8 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|123148410|sp|Q0TLG1.1|RRF_ECOL5 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|123560535|sp|Q325W8.1|RRF_SHIBS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|123563477|sp|Q32JT7.1|RRF_SHIDS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|123618027|sp|Q3Z5I6.1|RRF_SHISS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|166991554|sp|A7ZHR2.1|RRF_ECO24 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|166991555|sp|A7ZWB8.1|RRF_ECOHS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|189044054|sp|B1IQG9.1|RRF_ECOLC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|226703260|sp|B7MBF3.1|RRF_ECO45 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|226703261|sp|B7NID4.1|RRF_ECO7I RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|226703262|sp|B7M1X4.1|RRF_ECO8A RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|226703263|sp|B7N839.1|RRF_ECOLU RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|226703264|sp|B1LGX4.1|RRF_ECOSM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|226703265|sp|B7LWB1.1|RRF_ESCF3 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|226749928|sp|B5Z0F1.1|RRF_ECO5E RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|226749929|sp|B6HZE6.1|RRF_ECOSE RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|229564224|sp|B1XD41.1|RRF_ECODH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|238689500|sp|B2U315.1|RRF_SHIB3 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|254809510|sp|B7UIL7.1|RRF_ECO27 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|254809511|sp|B7LGN3.1|RRF_ECO55 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|254809512|sp|B7MP32.1|RRF_ECO81 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|259494540|sp|C4ZRR4.1|RRF_ECOBW RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|13399451|pdb|1EK8|A Chain A, Crystal Structure Of The Ribosome Recycling Factor (Rrf)
From Escherichia Coli
gi|71042411|pdb|1ZN0|A Chain A, Coordinates Of Rrf And Ef-G Fitted Into Cryo-Em Map Of The
50s Subunit Bound With Both Ef-G (Gdpnp) And Rrf
gi|71042414|pdb|1ZN1|A Chain A, Coordinates Of Rrf Fitted Into Cryo-Em Map Of The 70s
Post- Termination Complex
gi|169404635|pdb|2RDO|8 Chain 8, 50s Subunit With Ef-G(Gdpnp) And Rrf Bound
gi|402550661|pdb|4GAS|Y Chain Y, Allosteric Control Of The Ribosome By Small-Molecule
Antibiotics
gi|12512897|gb|AAG54474.1|AE005193_4 ribosome releasing factor [Escherichia coli O157:H7 str. EDL933]
gi|26106516|gb|AAN78702.1|AE016755_202 Ribosome recycling factor [Escherichia coli CFT073]
gi|147771|gb|AAA24607.1| ribosome releasing factor (gtg start codon) [Escherichia coli]
gi|806329|dbj|BAA02599.1| ribosome releasing factor (FRR) [Escherichia coli]
gi|1552749|gb|AAB08601.1| ribosome release factor [Escherichia coli]
gi|1786368|gb|AAC73283.1| ribosome recycling factor [Escherichia coli str. K-12 substr.
MG1655]
gi|13359630|dbj|BAB33597.1| ribosome releasing factor [Escherichia coli O157:H7 str. Sakai]
gi|21239027|dbj|BAB96748.1| ribosome recycling factor [Escherichia coli str. K12 substr. W3110]
gi|24050375|gb|AAN41824.1| ribosome releasing factor [Shigella flexneri 2a str. 301]
gi|30039971|gb|AAP15705.1| ribosome releasing factor [Shigella flexneri 2a str. 2457T]
gi|73854269|gb|AAZ86976.1| ribosome releasing factor [Shigella sonnei Ss046]
gi|81239710|gb|ABB60420.1| ribosome releasing factor [Shigella dysenteriae Sd197]
gi|81244182|gb|ABB64890.1| ribosome releasing factor [Shigella boydii Sb227]
gi|91070816|gb|ABE05697.1| ribosome recycling factor [Escherichia coli UTI89]
gi|110341983|gb|ABG68220.1| ribosome recycling factor [Escherichia coli 536]
gi|110613772|gb|ABF02439.1| ribosome releasing factor [Shigella flexneri 5 str. 8401]
gi|157065317|gb|ABV04572.1| ribosome releasing factor [Escherichia coli HS]
gi|157077241|gb|ABV16949.1| ribosome recycling factor [Escherichia coli E24377A]
gi|169756403|gb|ACA79102.1| ribosome recycling factor [Escherichia coli ATCC 8739]
gi|169887643|gb|ACB01350.1| ribosome recycling factor [Escherichia coli str. K-12 substr.
DH10B]
gi|170521040|gb|ACB19218.1| ribosome releasing factor [Escherichia coli SMS-3-5]
gi|187428908|gb|ACD08182.1| ribosome releasing factor [Shigella boydii CDC 3083-94]
gi|187767671|gb|EDU31515.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC4196]
gi|188014582|gb|EDU52704.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC4113]
gi|188491287|gb|EDU66390.1| ribosome releasing factor [Escherichia coli 53638]
gi|189000476|gb|EDU69462.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC4076]
gi|189357057|gb|EDU75476.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC4401]
gi|189360728|gb|EDU79147.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC4486]
gi|189365640|gb|EDU84056.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC4501]
gi|189371119|gb|EDU89535.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC869]
gi|190903612|gb|EDV63329.1| ribosome releasing factor [Escherichia coli B7A]
gi|190906953|gb|EDV66555.1| ribosome releasing factor [Escherichia coli F11]
gi|192931131|gb|EDV83734.1| ribosome releasing factor [Escherichia coli E22]
gi|192958977|gb|EDV89413.1| ribosome releasing factor [Escherichia coli E110019]
gi|194413691|gb|EDX29971.1| ribosome releasing factor [Escherichia coli B171]
gi|194418346|gb|EDX34436.1| ribosome releasing factor [Shigella dysenteriae 1012]
gi|194421972|gb|EDX37977.1| ribosome releasing factor [Escherichia coli 101-1]
gi|208728965|gb|EDZ78566.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC4206]
gi|208734052|gb|EDZ82739.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC4045]
gi|208739249|gb|EDZ86931.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC4042]
gi|209159436|gb|ACI36869.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC4115]
gi|209745824|gb|ACI71219.1| ribosome releasing factor [Escherichia coli]
gi|209745826|gb|ACI71220.1| ribosome releasing factor [Escherichia coli]
gi|209745828|gb|ACI71221.1| ribosome releasing factor [Escherichia coli]
gi|209745830|gb|ACI71222.1| ribosome releasing factor [Escherichia coli]
gi|209745832|gb|ACI71223.1| ribosome releasing factor [Escherichia coli]
gi|209910621|dbj|BAG75695.1| ribosome releasing factor [Escherichia coli SE11]
gi|215263405|emb|CAS07725.1| ribosome recycling factor [Escherichia coli O127:H6 str. E2348/69]
gi|217321359|gb|EEC29783.1| ribosome releasing factor [Escherichia coli O157:H7 str. TW14588]
gi|218350369|emb|CAU96052.1| ribosome recycling factor [Escherichia coli 55989]
gi|218355168|emb|CAQ87775.1| ribosome recycling factor [Escherichia fergusonii ATCC 35469]
gi|218359520|emb|CAQ97058.1| ribosome recycling factor [Escherichia coli IAI1]
gi|218363882|emb|CAR01547.1| ribosome recycling factor [Escherichia coli S88]
gi|218368578|emb|CAR16315.1| ribosome recycling factor [Escherichia coli IAI39]
gi|218425611|emb|CAR06397.1| ribosome recycling factor [Escherichia coli ED1a]
gi|218430523|emb|CAR11389.1| ribosome recycling factor [Escherichia coli UMN026]
gi|222032002|emb|CAP74741.1| ribosome recycling factor [Escherichia coli LF82]
gi|226840697|gb|EEH72699.1| ribosome-recycling factor [Escherichia sp. 1_1_43]
gi|226902243|gb|EEH88502.1| ribosome-recycling factor [Escherichia sp. 3_2_53FAA]
gi|227838053|gb|EEJ48519.1| ribosome recycling factor [Escherichia coli 83972]
gi|238863488|gb|ACR65486.1| ribosome recycling factor [Escherichia coli BW2952]
gi|242376003|emb|CAQ30686.1| ribosome recycling factor [Escherichia coli BL21(DE3)]
gi|253325845|gb|ACT30447.1| ribosome recycling factor [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|253972192|gb|ACT37863.1| ribosome releasing factor [Escherichia coli B str. REL606]
gi|253976401|gb|ACT42071.1| ribosome releasing factor [Escherichia coli BL21(DE3)]
gi|254590705|gb|ACT70066.1| ribosome recycling factor [Escherichia coli O157:H7 str. TW14359]
gi|257752031|dbj|BAI23533.1| ribosome recycling factor [Escherichia coli O26:H11 str. 11368]
gi|257757551|dbj|BAI29048.1| ribosome recycling factor [Escherichia coli O103:H2 str. 12009]
gi|257762677|dbj|BAI34172.1| ribosome recycling factor [Escherichia coli O111:H- str. 11128]
gi|260450624|gb|ACX41046.1| ribosome recycling factor [Escherichia coli DH1]
gi|281177397|dbj|BAI53727.1| ribosome releasing factor [Escherichia coli SE15]
gi|281599527|gb|ADA72511.1| Ribosome recycling factor [Shigella flexneri 2002017]
gi|284919947|emb|CBG33002.1| ribosome recycling factor [Escherichia coli 042]
gi|290760867|gb|ADD54828.1| Ribosome recycling factor [Escherichia coli O55:H7 str. CB9615]
gi|291321282|gb|EFE60724.1| ribosome recycling factor [Escherichia coli B088]
gi|291430156|gb|EFF03170.1| frr [Escherichia coli FVEC1412]
gi|291430775|gb|EFF03773.1| ribosome recycling factor [Escherichia coli B185]
gi|291472515|gb|EFF14997.1| ribosome recycling factor [Escherichia coli B354]
gi|294492515|gb|ADE91271.1| ribosome recycling factor [Escherichia coli IHE3034]
gi|298281111|gb|EFI22612.1| ribosome-recycling factor [Escherichia coli FVEC1302]
gi|299878297|gb|EFI86508.1| ribosome recycling factor [Escherichia coli MS 196-1]
gi|300298344|gb|EFJ54729.1| ribosome recycling factor [Escherichia coli MS 185-1]
gi|300306582|gb|EFJ61102.1| ribosome recycling factor [Escherichia coli MS 200-1]
gi|300317085|gb|EFJ66869.1| ribosome recycling factor [Escherichia coli MS 175-1]
gi|300355739|gb|EFJ71609.1| ribosome recycling factor [Escherichia coli MS 198-1]
gi|300395747|gb|EFJ79285.1| ribosome recycling factor [Escherichia coli MS 69-1]
gi|300405877|gb|EFJ89415.1| ribosome recycling factor [Escherichia coli MS 84-1]
gi|300406530|gb|EFJ90068.1| ribosome recycling factor [Escherichia coli MS 45-1]
gi|300412843|gb|EFJ96153.1| ribosome recycling factor [Escherichia coli MS 115-1]
gi|300420663|gb|EFK03974.1| ribosome recycling factor [Escherichia coli MS 182-1]
gi|300450828|gb|EFK14448.1| ribosome recycling factor [Escherichia coli MS 116-1]
gi|300456461|gb|EFK19954.1| ribosome recycling factor [Escherichia coli MS 21-1]
gi|300460102|gb|EFK23595.1| ribosome recycling factor [Escherichia coli MS 187-1]
gi|300523382|gb|EFK44451.1| ribosome recycling factor [Escherichia coli MS 119-7]
gi|300531419|gb|EFK52481.1| ribosome recycling factor [Escherichia coli MS 107-1]
gi|300839413|gb|EFK67173.1| ribosome recycling factor [Escherichia coli MS 124-1]
gi|300843941|gb|EFK71701.1| ribosome recycling factor [Escherichia coli MS 78-1]
gi|301075281|gb|EFK90087.1| ribosome recycling factor [Escherichia coli MS 146-1]
gi|305850890|gb|EFM51345.1| ribosome recycling factor [Escherichia coli NC101]
gi|306908360|gb|EFN38858.1| ribosome recycling factor [Escherichia coli W]
gi|307552022|gb|ADN44797.1| ribosome recycling factor [Escherichia coli ABU 83972]
gi|307629748|gb|ADN74052.1| ribosome recycling factor [Escherichia coli UM146]
gi|308120053|gb|EFO57315.1| ribosome recycling factor [Escherichia coli MS 145-7]
gi|309700380|emb|CBI99668.1| ribosome recycling factor [Escherichia coli ETEC H10407]
gi|310337770|gb|EFQ02881.1| ribosome recycling factor [Escherichia coli 1827-70]
gi|312289551|gb|EFR17445.1| ribosome recycling factor [Escherichia coli 2362-75]
gi|312944780|gb|ADR25607.1| ribosome recycling factor [Escherichia coli O83:H1 str. NRG 857C]
gi|313646768|gb|EFS11227.1| ribosome recycling factor [Shigella flexneri 2a str. 2457T]
gi|315059390|gb|ADT73717.1| ribosome recycling factor [Escherichia coli W]
gi|315134862|dbj|BAJ42021.1| ribosome recycling factor [Escherichia coli DH1]
gi|315254974|gb|EFU34942.1| ribosome recycling factor [Escherichia coli MS 85-1]
gi|315285261|gb|EFU44706.1| ribosome recycling factor [Escherichia coli MS 110-3]
gi|315294576|gb|EFU53923.1| ribosome recycling factor [Escherichia coli MS 153-1]
gi|315300676|gb|EFU59903.1| ribosome recycling factor [Escherichia coli MS 16-3]
gi|315616344|gb|EFU96962.1| ribosome recycling factor [Escherichia coli 3431]
gi|320173347|gb|EFW48550.1| Ribosome recycling factor [Shigella dysenteriae CDC 74-1112]
gi|320179914|gb|EFW54858.1| Ribosome recycling factor [Shigella boydii ATCC 9905]
gi|320186593|gb|EFW61318.1| Ribosome recycling factor [Shigella flexneri CDC 796-83]
gi|320190302|gb|EFW64952.1| Ribosome recycling factor [Escherichia coli O157:H7 str. EC1212]
gi|320196952|gb|EFW71573.1| Ribosome recycling factor [Escherichia coli WV_060327]
gi|320200303|gb|EFW74889.1| Ribosome recycling factor [Escherichia coli EC4100B]
gi|320639978|gb|EFX09563.1| ribosome recycling factor [Escherichia coli O157:H7 str. G5101]
gi|320644748|gb|EFX13792.1| ribosome recycling factor [Escherichia coli O157:H- str. 493-89]
gi|320652904|gb|EFX21142.1| ribosome recycling factor [Escherichia coli O157:H- str. H 2687]
gi|320658292|gb|EFX26021.1| ribosome recycling factor [Escherichia coli O55:H7 str. 3256-97 TW
07815]
gi|320663602|gb|EFX30886.1| ribosome recycling factor [Escherichia coli O55:H7 str. USDA 5905]
gi|320668915|gb|EFX35710.1| ribosome recycling factor [Escherichia coli O157:H7 str. LSU-61]
gi|323157991|gb|EFZ44093.1| ribosome recycling factor [Escherichia coli EPECa14]
gi|323160209|gb|EFZ46168.1| ribosome recycling factor [Escherichia coli E128010]
gi|323165873|gb|EFZ51655.1| ribosome recycling factor [Shigella sonnei 53G]
gi|323170963|gb|EFZ56612.1| ribosome recycling factor [Escherichia coli LT-68]
gi|323176486|gb|EFZ62078.1| ribosome recycling factor [Escherichia coli OK1180]
gi|323181679|gb|EFZ67093.1| ribosome recycling factor [Escherichia coli OK1357]
gi|323190428|gb|EFZ75703.1| ribosome recycling factor [Escherichia coli RN587/1]
gi|323380051|gb|ADX52319.1| ribosome recycling factor [Escherichia coli KO11FL]
gi|323935012|gb|EGB31385.1| ribosome recycling protein [Escherichia coli E1520]
gi|323939952|gb|EGB36150.1| ribosome recycling protein [Escherichia coli E482]
gi|323945647|gb|EGB41696.1| ribosome recycling protein [Escherichia coli H120]
gi|323950829|gb|EGB46706.1| ribosome recycling protein [Escherichia coli H252]
gi|323955133|gb|EGB50908.1| ribosome recycling protein [Escherichia coli H263]
gi|323959933|gb|EGB55580.1| ribosome recycling protein [Escherichia coli H489]
gi|323964935|gb|EGB60401.1| ribosome recycling protein [Escherichia coli M863]
gi|323970651|gb|EGB65907.1| ribosome recycling protein [Escherichia coli TA007]
gi|323975660|gb|EGB70756.1| ribosome recycling protein [Escherichia coli TW10509]
gi|324008234|gb|EGB77453.1| ribosome recycling factor [Escherichia coli MS 57-2]
gi|324014110|gb|EGB83329.1| ribosome recycling factor [Escherichia coli MS 60-1]
gi|324017821|gb|EGB87040.1| ribosome recycling factor [Escherichia coli MS 117-3]
gi|324112417|gb|EGC06394.1| ribosome recycling protein [Escherichia fergusonii B253]
gi|324118292|gb|EGC12187.1| ribosome recycling protein [Escherichia coli E1167]
gi|325496104|gb|EGC93963.1| ribosome recycling factor [Escherichia fergusonii ECD227]
gi|326339773|gb|EGD63581.1| Ribosome recycling factor [Escherichia coli O157:H7 str. 1044]
gi|326345108|gb|EGD68851.1| Ribosome recycling factor [Escherichia coli O157:H7 str. 1125]
gi|327255151|gb|EGE66754.1| ribosome recycling factor [Escherichia coli STEC_7v]
gi|330910022|gb|EGH38532.1| ribosome recycling factor [Escherichia coli AA86]
gi|331040372|gb|EGI12579.1| ribosome recycling factor [Escherichia coli H736]
gi|331046072|gb|EGI18191.1| ribosome recycling factor [Escherichia coli M605]
gi|331051531|gb|EGI23580.1| ribosome recycling factor [Escherichia coli M718]
gi|331052285|gb|EGI24324.1| ribosome recycling factor [Escherichia coli TA206]
gi|331061461|gb|EGI33424.1| ribosome recycling factor [Escherichia coli TA143]
gi|331066624|gb|EGI38501.1| ribosome recycling factor [Escherichia coli TA271]
gi|331071523|gb|EGI42880.1| ribosome recycling factor [Escherichia coli TA280]
gi|331072214|gb|EGI43550.1| ribosome recycling factor [Escherichia coli H591]
gi|331081778|gb|EGI52939.1| ribosome recycling factor [Escherichia coli H299]
gi|332095214|gb|EGJ00243.1| ribosome recycling factor [Shigella boydii 5216-82]
gi|332098804|gb|EGJ03764.1| ribosome recycling factor [Shigella boydii 3594-74]
gi|332105198|gb|EGJ08544.1| ribosome-recycling factor [Shigella sp. D9]
gi|332341505|gb|AEE54839.1| ribosome recycling factor [Escherichia coli UMNK88]
gi|332762066|gb|EGJ92337.1| ribosome recycling factor [Shigella flexneri 2747-71]
gi|332762175|gb|EGJ92444.1| ribosome recycling factor [Shigella flexneri 4343-70]
gi|332765019|gb|EGJ95247.1| ribosome recycling factor [Shigella flexneri K-671]
gi|332768674|gb|EGJ98854.1| ribosome recycling factor [Shigella flexneri 2930-71]
gi|333009268|gb|EGK28724.1| ribosome recycling factor [Shigella flexneri K-218]
gi|333010666|gb|EGK30099.1| ribosome recycling factor [Shigella flexneri VA-6]
gi|333011010|gb|EGK30429.1| ribosome recycling factor [Shigella flexneri K-272]
gi|333021805|gb|EGK41054.1| ribosome recycling factor [Shigella flexneri K-227]
gi|333022235|gb|EGK41474.1| ribosome recycling factor [Shigella flexneri K-304]
gi|333968178|gb|AEG34983.1| Ribosome recycling factor [Escherichia coli NA114]
gi|335578373|gb|EGM63591.1| ribosome recycling factor [Shigella flexneri J1713]
gi|338771746|gb|EGP26478.1| Ribosome recycling factor [Escherichia coli PCN033]
gi|339413157|gb|AEJ54829.1| ribosome recycling factor [Escherichia coli UMNF18]
gi|340736143|gb|EGR65193.1| ribosome recycling factor [Escherichia coli O104:H4 str. 01-09591]
gi|340742059|gb|EGR76200.1| ribosome recycling factor [Escherichia coli O104:H4 str. LB226692]
gi|341917595|gb|EGT67210.1| frr [Escherichia coli O104:H4 str. C227-11]
gi|342364010|gb|EGU28113.1| ribosome recycling factor [Escherichia coli XH140A]
gi|342928017|gb|EGU96739.1| ribosome recycling factor [Escherichia coli MS 79-10]
gi|344194316|gb|EGV48390.1| ribosome recycling factor [Escherichia coli XH001]
gi|345342354|gb|EGW74750.1| ribosome recycling factor [Escherichia coli STEC_C165-02]
gi|345344688|gb|EGW77053.1| ribosome recycling factor [Escherichia coli STEC_B2F1]
gi|345346150|gb|EGW78486.1| ribosome recycling factor [Escherichia coli 2534-86]
gi|345354592|gb|EGW86813.1| ribosome recycling factor [Escherichia coli STEC_94C]
gi|345363232|gb|EGW95375.1| ribosome recycling factor [Escherichia coli 3030-1]
gi|345367157|gb|EGW99244.1| ribosome recycling factor [Escherichia coli STEC_EH250]
gi|345387164|gb|EGX16992.1| ribosome recycling factor [Escherichia coli STEC_H.1.8]
gi|345391448|gb|EGX21238.1| ribosome recycling factor [Escherichia coli STEC_S1191]
gi|345395759|gb|EGX25497.1| ribosome recycling factor [Escherichia coli TX1999]
gi|349736321|gb|AEQ11027.1| ribosome recycling factor [Escherichia coli O7:K1 str. CE10]
gi|354859373|gb|EHF19821.1| ribosome-recycling factor [Escherichia coli O104:H4 str. 04-8351]
gi|354859860|gb|EHF20307.1| ribosome-recycling factor [Escherichia coli O104:H4 str. C227-11]
gi|354866557|gb|EHF26980.1| ribosome-recycling factor [Escherichia coli O104:H4 str. C236-11]
gi|354876891|gb|EHF37251.1| ribosome-recycling factor [Escherichia coli O104:H4 str. 09-7901]
gi|354881900|gb|EHF42228.1| ribosome-recycling factor [Escherichia coli O104:H4 str. 11-4404]
gi|354884998|gb|EHF45309.1| ribosome-recycling factor [Escherichia coli O104:H4 str. 11-3677]
gi|354886445|gb|EHF46732.1| ribosome-recycling factor [Escherichia coli O104:H4 str. 11-4522]
gi|354889961|gb|EHF50208.1| ribosome-recycling factor [Escherichia coli O104:H4 str. 11-4623]
gi|354902161|gb|EHF62283.1| ribosome-recycling factor [Escherichia coli O104:H4 str. 11-4632
C1]
gi|354905487|gb|EHF65570.1| ribosome-recycling factor [Escherichia coli O104:H4 str. 11-4632
C2]
gi|354907994|gb|EHF68050.1| ribosome-recycling factor [Escherichia coli O104:H4 str. 11-4632
C3]
gi|354910265|gb|EHF70293.1| ribosome-recycling factor [Escherichia coli O104:H4 str. 11-4632
C4]
gi|354918466|gb|EHF78422.1| ribosome-recycling factor [Escherichia coli O104:H4 str. 11-4632
C5]
gi|355353449|gb|EHG02616.1| Ribosome Recycling Factor [Escherichia coli cloneA_i1]
gi|355418593|gb|AER82790.1| ribosome recycling factor [Escherichia coli str. 'clone D i2']
gi|355423513|gb|AER87709.1| ribosome recycling factor [Escherichia coli str. 'clone D i14']
gi|359331030|dbj|BAL37477.1| ribosome recycling factor [Escherichia coli str. K-12 substr.
MDS42]
gi|371598105|gb|EHN86919.1| ribosome-recycling factor [Escherichia coli H494]
gi|371598775|gb|EHN87570.1| ribosome-recycling factor [Escherichia coli TA124]
gi|371601982|gb|EHN90701.1| ribosome-recycling factor [Escherichia coli E101]
gi|371605328|gb|EHN93945.1| ribosome-recycling factor [Escherichia coli B093]
gi|371608311|gb|EHN96867.1| ribosome-recycling factor [Escherichia coli H397]
gi|373245847|gb|EHP65312.1| ribosome-recycling factor [Escherichia coli 4_1_47FAA]
gi|374357093|gb|AEZ38800.1| ribosome recycling factor [Escherichia coli O55:H7 str. RM12579]
gi|375322380|gb|EHS68140.1| ribosome recycling factor [Escherichia coli O157:H43 str. T22]
gi|377850593|gb|EHU15555.1| ribosome recycling factor [Escherichia coli DEC1A]
gi|377851637|gb|EHU16582.1| ribosome recycling factor [Escherichia coli DEC1C]
gi|377854400|gb|EHU19278.1| ribosome recycling factor [Escherichia coli DEC1B]
gi|377865264|gb|EHU30056.1| ribosome recycling factor [Escherichia coli DEC1D]
gi|377867875|gb|EHU32629.1| ribosome recycling factor [Escherichia coli DEC1E]
gi|377869341|gb|EHU34058.1| ribosome recycling factor [Escherichia coli DEC2A]
gi|377880927|gb|EHU45493.1| ribosome recycling factor [Escherichia coli DEC2B]
gi|377884865|gb|EHU49373.1| ribosome recycling factor [Escherichia coli DEC2D]
gi|377886387|gb|EHU50869.1| ribosome recycling factor [Escherichia coli DEC2C]
gi|377887557|gb|EHU52034.1| ribosome recycling factor [Escherichia coli DEC3A]
gi|377899441|gb|EHU63789.1| ribosome recycling factor [Escherichia coli DEC2E]
gi|377915450|gb|EHU79559.1| ribosome recycling factor [Escherichia coli DEC3C]
gi|377919727|gb|EHU83765.1| ribosome recycling factor [Escherichia coli DEC3D]
gi|377921271|gb|EHU85271.1| ribosome recycling factor [Escherichia coli DEC3E]
gi|377933795|gb|EHU97639.1| ribosome recycling factor [Escherichia coli DEC3F]
gi|377934963|gb|EHU98788.1| ribosome recycling factor [Escherichia coli DEC4A]
gi|377935975|gb|EHU99769.1| ribosome recycling factor [Escherichia coli DEC4D]
gi|377941324|gb|EHV05066.1| ribosome recycling factor [Escherichia coli DEC4B]
gi|377950850|gb|EHV14471.1| ribosome recycling factor [Escherichia coli DEC4C]
gi|377951898|gb|EHV15506.1| ribosome recycling factor [Escherichia coli DEC4F]
gi|377955953|gb|EHV19505.1| ribosome recycling factor [Escherichia coli DEC4E]
gi|377966847|gb|EHV30257.1| ribosome recycling factor [Escherichia coli DEC5A]
gi|377974732|gb|EHV38059.1| ribosome recycling factor [Escherichia coli DEC5B]
gi|377978935|gb|EHV42214.1| ribosome recycling factor [Escherichia coli DEC5E]
gi|377983692|gb|EHV46934.1| ribosome recycling factor [Escherichia coli DEC5C]
gi|378000725|gb|EHV63791.1| ribosome recycling factor [Escherichia coli DEC6A]
gi|378002615|gb|EHV65666.1| ribosome recycling factor [Escherichia coli DEC6B]
gi|378015595|gb|EHV78489.1| ribosome recycling factor [Escherichia coli DEC6D]
gi|378017583|gb|EHV80455.1| ribosome recycling factor [Escherichia coli DEC6E]
gi|378019424|gb|EHV82255.1| ribosome recycling factor [Escherichia coli DEC7A]
gi|378028740|gb|EHV91357.1| ribosome recycling factor [Escherichia coli DEC7C]
gi|378034279|gb|EHV96845.1| ribosome recycling factor [Escherichia coli DEC7D]
gi|378038988|gb|EHW01493.1| ribosome recycling factor [Escherichia coli DEC7B]
gi|378043368|gb|EHW05804.1| ribosome recycling factor [Escherichia coli DEC7E]
gi|378054644|gb|EHW16922.1| ribosome recycling factor [Escherichia coli DEC8A]
gi|378058092|gb|EHW20312.1| ribosome recycling factor [Escherichia coli DEC8B]
gi|378064665|gb|EHW26825.1| ribosome recycling factor [Escherichia coli DEC8C]
gi|378070161|gb|EHW32244.1| ribosome recycling factor [Escherichia coli DEC8D]
gi|378073891|gb|EHW35936.1| ribosome recycling factor [Escherichia coli DEC8E]
gi|378083218|gb|EHW45153.1| ribosome recycling factor [Escherichia coli DEC9A]
gi|378083470|gb|EHW45402.1| ribosome recycling factor [Escherichia coli DEC9B]
gi|378095876|gb|EHW57658.1| ribosome recycling factor [Escherichia coli DEC9D]
gi|378103991|gb|EHW65653.1| ribosome recycling factor [Escherichia coli DEC9E]
gi|378108914|gb|EHW70526.1| ribosome recycling factor [Escherichia coli DEC10A]
gi|378118775|gb|EHW80277.1| ribosome recycling factor [Escherichia coli DEC10B]
gi|378120155|gb|EHW81636.1| ribosome recycling factor [Escherichia coli DEC10C]
gi|378122100|gb|EHW83544.1| ribosome recycling factor [Escherichia coli DEC10D]
gi|378134837|gb|EHW96152.1| ribosome recycling factor [Escherichia coli DEC10E]
gi|378136650|gb|EHW97941.1| ribosome recycling factor [Escherichia coli DEC11A]
gi|378141403|gb|EHX02620.1| ribosome recycling factor [Escherichia coli DEC10F]
gi|378147753|gb|EHX08899.1| ribosome recycling factor [Escherichia coli DEC11B]
gi|378154332|gb|EHX15408.1| ribosome recycling factor [Escherichia coli DEC11D]
gi|378158159|gb|EHX19189.1| ribosome recycling factor [Escherichia coli DEC11C]
gi|378161922|gb|EHX22891.1| ribosome recycling factor [Escherichia coli DEC11E]
gi|378176016|gb|EHX36824.1| ribosome recycling factor [Escherichia coli DEC12B]
gi|378176513|gb|EHX37319.1| ribosome recycling factor [Escherichia coli DEC12A]
gi|378177553|gb|EHX38344.1| ribosome recycling factor [Escherichia coli DEC12C]
gi|378190843|gb|EHX51421.1| ribosome recycling factor [Escherichia coli DEC13A]
gi|378192315|gb|EHX52878.1| ribosome recycling factor [Escherichia coli DEC12D]
gi|378193933|gb|EHX54456.1| ribosome recycling factor [Escherichia coli DEC12E]
gi|378208610|gb|EHX68991.1| ribosome recycling factor [Escherichia coli DEC13D]
gi|378209592|gb|EHX69961.1| ribosome recycling factor [Escherichia coli DEC13C]
gi|378220357|gb|EHX80618.1| ribosome recycling factor [Escherichia coli DEC13E]
gi|378223393|gb|EHX83617.1| ribosome recycling factor [Escherichia coli DEC14A]
gi|378227571|gb|EHX87741.1| ribosome recycling factor [Escherichia coli DEC14B]
gi|378237823|gb|EHX97841.1| ribosome recycling factor [Escherichia coli DEC14D]
gi|378246194|gb|EHY06126.1| ribosome recycling factor [Escherichia coli DEC15A]
gi|378249947|gb|EHY09856.1| ribosome recycling factor [Escherichia coli DEC15D]
gi|378252384|gb|EHY12275.1| ribosome recycling factor [Escherichia coli DEC15C]
gi|378252442|gb|EHY12332.1| ribosome recycling factor [Escherichia coli DEC15B]
gi|378261810|gb|EHY21601.1| ribosome recycling factor [Escherichia coli DEC15E]
gi|380349743|gb|EIA38008.1| ribosome recycling factor [Escherichia coli SCI-07]
gi|383390197|gb|AFH15155.1| ribosome recycling factor [Escherichia coli KO11FL]
gi|383403592|gb|AFH09835.1| ribosome recycling factor [Escherichia coli W]
gi|383465743|gb|EID60764.1| ribosome recycling factor [Shigella flexneri 5a str. M90T]
gi|383477524|gb|EID69441.1| ribosome recycling factor [Escherichia coli W26]
gi|384377843|gb|EIE35736.1| ribosome recycling factor [Escherichia coli J53]
gi|384472088|gb|EIE56150.1| ribosome recycling factor [Escherichia coli AI27]
gi|385154223|gb|EIF16239.1| ribosome recycling factor [Escherichia coli O32:H37 str. P4]
gi|385540586|gb|EIF87407.1| ribosome-recycling factor [Escherichia coli M919]
gi|385705110|gb|EIG42177.1| ribosome-recycling factor [Escherichia coli B799]
gi|385713653|gb|EIG50584.1| ribosome-recycling factor [Escherichia coli H730]
gi|386123804|gb|EIG72393.1| ribosome-recycling factor [Escherichia sp. 4_1_40B]
gi|386143123|gb|EIG84259.1| ribosome recycling factor [Escherichia coli 1.2741]
gi|386145173|gb|EIG91637.1| ribosome recycling factor [Escherichia coli 97.0246]
gi|386153519|gb|EIH04808.1| ribosome recycling factor [Escherichia coli 5.0588]
gi|386154865|gb|EIH11223.1| ribosome recycling factor [Escherichia coli 97.0259]
gi|386159674|gb|EIH21488.1| ribosome recycling factor [Escherichia coli 1.2264]
gi|386169190|gb|EIH35698.1| ribosome recycling factor [Escherichia coli 96.0497]
gi|386170546|gb|EIH42599.1| ribosome recycling factor [Escherichia coli 99.0741]
gi|386176836|gb|EIH54315.1| ribosome recycling factor [Escherichia coli 3.2608]
gi|386185027|gb|EIH67763.1| ribosome recycling factor [Escherichia coli 93.0624]
gi|386191804|gb|EIH80545.1| ribosome recycling factor [Escherichia coli 4.0522]
gi|386193762|gb|EIH88046.1| ribosome recycling factor [Escherichia coli JB1-95]
gi|386199596|gb|EIH98587.1| ribosome recycling factor [Escherichia coli 96.154]
gi|386206624|gb|EII11130.1| ribosome recycling factor [Escherichia coli 5.0959]
gi|386211057|gb|EII21527.1| ribosome recycling factor [Escherichia coli 9.0111]
gi|386217194|gb|EII33683.1| ribosome recycling factor [Escherichia coli 4.0967]
gi|386225855|gb|EII48180.1| ribosome recycling factor [Escherichia coli 2.3916]
gi|386228528|gb|EII55884.1| ribosome recycling factor [Escherichia coli 3.3884]
gi|386234140|gb|EII66120.1| ribosome recycling factor [Escherichia coli 2.4168]
gi|386237737|gb|EII74681.1| ribosome recycling factor [Escherichia coli 3.2303]
gi|386242584|gb|EII84319.1| ribosome recycling factor [Escherichia coli 3003]
gi|386248886|gb|EII95058.1| ribosome recycling factor [Escherichia coli TW07793]
gi|386252536|gb|EIJ02227.1| ribosome recycling factor [Escherichia coli B41]
gi|386261259|gb|EIJ16727.1| ribosome recycling factor [Escherichia coli 900105 (10e)]
gi|386794188|gb|AFJ27222.1| ribosome recycling factor [Escherichia coli Xuzhou21]
gi|388338098|gb|EIL04575.1| ribosome recycling factor [Escherichia coli O103:H25 str. CVM9340]
gi|388340283|gb|EIL06530.1| ribosome recycling factor [Escherichia coli O103:H2 str. CVM9450]
gi|388347915|gb|EIL13562.1| ribosome recycling factor [Escherichia coli O111:H11 str. CVM9534]
gi|388348830|gb|EIL14398.1| ribosome recycling factor [Escherichia coli O111:H8 str. CVM9570]
gi|388367125|gb|EIL30820.1| ribosome recycling factor [Escherichia coli O26:H11 str. CVM9942]
gi|388367385|gb|EIL31069.1| ribosome recycling factor [Escherichia coli O111:H8 str. CVM9574]
gi|388369924|gb|EIL33490.1| ribosome recycling factor [Escherichia coli O111:H11 str. CVM9545]
gi|388379970|gb|EIL42596.1| ribosome recycling factor [Escherichia coli O26:H11 str. CVM10026]
gi|388389010|gb|EIL50553.1| ribosome recycling factor [Escherichia coli KD2]
gi|388391187|gb|EIL52660.1| ribosome recycling factor [Escherichia coli KD1]
gi|388397201|gb|EIL58230.1| ribosome recycling factor [Escherichia coli 541-15]
gi|388403393|gb|EIL63920.1| ribosome recycling factor [Escherichia coli 541-1]
gi|388404962|gb|EIL65401.1| ribosome recycling factor [Escherichia coli 576-1]
gi|388411393|gb|EIL71574.1| ribosome recycling factor [Escherichia coli 75]
gi|388414453|gb|EIL74410.1| ribosome recycling factor [Escherichia coli CUMT8]
gi|388422955|gb|EIL82504.1| ribosome recycling factor [Escherichia coli HM605]
gi|390654248|gb|EIN32301.1| ribosome recycling factor [Escherichia coli FDA517]
gi|390654543|gb|EIN32589.1| ribosome recycling factor [Escherichia coli FDA505]
gi|390671006|gb|EIN47494.1| ribosome recycling factor [Escherichia coli 93-001]
gi|390674927|gb|EIN51092.1| ribosome recycling factor [Escherichia coli FRIK1990]
gi|390676266|gb|EIN52372.1| ribosome recycling factor [Escherichia coli FRIK1985]
gi|390690044|gb|EIN64946.1| ribosome recycling factor [Escherichia coli PA3]
gi|390693838|gb|EIN68455.1| ribosome recycling factor [Escherichia coli PA9]
gi|390694800|gb|EIN69358.1| ribosome recycling factor [Escherichia coli PA5]
gi|390711948|gb|EIN84906.1| ribosome recycling factor [Escherichia coli PA15]
gi|390715199|gb|EIN88066.1| ribosome recycling factor [Escherichia coli PA14]
gi|390716774|gb|EIN89569.1| ribosome recycling factor [Escherichia coli PA25]
gi|390721571|gb|EIN94265.1| ribosome recycling factor [Escherichia coli PA22]
gi|390735009|gb|EIO06438.1| ribosome recycling factor [Escherichia coli PA24]
gi|390738292|gb|EIO09510.1| ribosome recycling factor [Escherichia coli PA28]
gi|390753365|gb|EIO23088.1| ribosome recycling factor [Escherichia coli PA31]
gi|390758176|gb|EIO27644.1| ribosome recycling factor [Escherichia coli PA33]
gi|390763433|gb|EIO32682.1| ribosome recycling factor [Escherichia coli PA40]
gi|390778318|gb|EIO46076.1| ribosome recycling factor [Escherichia coli TW06591]
gi|390781189|gb|EIO48873.1| ribosome recycling factor [Escherichia coli PA42]
gi|390788087|gb|EIO55557.1| ribosome recycling factor [Escherichia coli PA39]
gi|390795993|gb|EIO63269.1| ribosome recycling factor [Escherichia coli TW10246]
gi|390802920|gb|EIO69949.1| ribosome recycling factor [Escherichia coli TW11039]
gi|390812285|gb|EIO78968.1| ribosome recycling factor [Escherichia coli TW07945]
gi|390812714|gb|EIO79390.1| ribosome recycling factor [Escherichia coli TW09109]
gi|390820074|gb|EIO86380.1| ribosome recycling factor [Escherichia coli TW10119]
gi|390824951|gb|EIO90900.1| ribosome recycling factor [Escherichia coli TW09098]
gi|390837926|gb|EIP02244.1| ribosome recycling factor [Escherichia coli EC4203]
gi|390840993|gb|EIP04964.1| ribosome recycling factor [Escherichia coli EC4196]
gi|390845031|gb|EIP08716.1| ribosome recycling factor [Escherichia coli TW09195]
gi|390856504|gb|EIP19084.1| ribosome recycling factor [Escherichia coli TW14301]
gi|390861504|gb|EIP23752.1| ribosome recycling factor [Escherichia coli EC4421]
gi|390862652|gb|EIP24827.1| ribosome recycling factor [Escherichia coli TW14313]
gi|390872598|gb|EIP33887.1| ribosome recycling factor [Escherichia coli EC4422]
gi|390877808|gb|EIP38703.1| ribosome recycling factor [Escherichia coli EC4013]
gi|390887304|gb|EIP47288.1| ribosome recycling factor [Escherichia coli EC4402]
gi|390888844|gb|EIP48626.1| ribosome recycling factor [Escherichia coli EC4439]
gi|390904581|gb|EIP63577.1| ribosome recycling factor [Escherichia coli EC1738]
gi|390912344|gb|EIP70996.1| ribosome recycling factor [Escherichia coli EC4437]
gi|390912813|gb|EIP71459.1| ribosome recycling factor [Escherichia coli EC1734]
gi|390914296|gb|EIP72840.1| ribosome recycling factor [Escherichia coli EC1863]
gi|390917736|gb|EIP76153.1| ribosome recycling factor [Escherichia coli EC4448]
gi|390926744|gb|EIP84303.1| ribosome recycling factor [Escherichia coli EC1845]
gi|391257703|gb|EIQ16813.1| ribosome recycling factor [Shigella flexneri CCH060]
gi|391260950|gb|EIQ20000.1| ribosome recycling factor [Shigella flexneri K-1770]
gi|391268610|gb|EIQ27535.1| ribosome recycling factor [Shigella flexneri K-315]
gi|391275183|gb|EIQ33976.1| ribosome recycling factor [Shigella flexneri K-404]
gi|391277047|gb|EIQ35808.1| ribosome recycling factor [Shigella boydii 965-58]
gi|391289880|gb|EIQ48364.1| ribosome recycling factor [Shigella boydii 4444-74]
gi|391290055|gb|EIQ48531.1| ribosome recycling factor [Shigella sonnei 3226-85]
gi|391297310|gb|EIQ55364.1| ribosome recycling factor [Shigella sonnei 4822-66]
gi|391307456|gb|EIQ65189.1| ribosome recycling factor [Shigella dysenteriae 225-75]
gi|391310160|gb|EIQ67816.1| ribosome recycling factor [Escherichia coli EPECa12]
gi|391315735|gb|EIQ73259.1| ribosome recycling factor [Escherichia coli EPEC C342-62]
gi|391320940|gb|EIQ77715.1| ribosome recycling factor [Shigella flexneri 1235-66]
gi|394393531|gb|EJE70216.1| ribosome recycling factor [Escherichia coli O111:H8 str. CVM9602]
gi|394394951|gb|EJE71467.1| ribosome recycling factor [Escherichia coli O26:H11 str. CVM10224]
gi|394400458|gb|EJE76372.1| ribosome recycling factor [Escherichia coli O111:H8 str. CVM9634]
gi|394412961|gb|EJE87047.1| ribosome recycling factor [Escherichia coli O26:H11 str. CVM10021]
gi|394417691|gb|EJE91408.1| ribosome recycling factor [Escherichia coli O111:H11 str. CVM9553]
gi|394421016|gb|EJE94511.1| ribosome recycling factor [Escherichia coli O111:H11 str. CVM9455]
gi|394427717|gb|EJF00370.1| ribosome recycling factor [Escherichia coli O26:H11 str. CVM9952]
gi|394431372|gb|EJF03580.1| ribosome recycling factor [Escherichia coli O26:H11 str. CVM10030]
gi|397787176|gb|EJK98005.1| ribosome recycling factor [Escherichia coli STEC_O31]
gi|397901977|gb|EJL18313.1| ribosome recycling factor [Shigella flexneri 6603-63]
gi|397903473|gb|EJL19770.1| ribosome recycling factor [Shigella sonnei str. Moseley]
gi|404342126|gb|EJZ68516.1| ribosome recycling factor [Shigella flexneri 1485-80]
gi|406779359|gb|AFS58783.1| ribosome recycling factor [Escherichia coli O104:H4 str.
2009EL-2050]
gi|407055954|gb|AFS76005.1| ribosome recycling factor [Escherichia coli O104:H4 str.
2011C-3493]
gi|407063661|gb|AFS84708.1| ribosome recycling factor [Escherichia coli O104:H4 str.
2009EL-2071]
gi|408073663|gb|EKH07972.1| ribosome recycling factor [Escherichia coli PA7]
gi|408077399|gb|EKH11607.1| ribosome recycling factor [Escherichia coli FRIK920]
gi|408087411|gb|EKH20860.1| ribosome recycling factor [Escherichia coli PA34]
gi|408097756|gb|EKH30639.1| ribosome recycling factor [Escherichia coli FDA507]
gi|408103937|gb|EKH36266.1| ribosome recycling factor [Escherichia coli FDA504]
gi|408111366|gb|EKH43117.1| ribosome recycling factor [Escherichia coli FRIK1999]
gi|408133088|gb|EKH63005.1| ribosome recycling factor [Escherichia coli FRIK2001]
gi|408151007|gb|EKH79525.1| ribosome recycling factor [Escherichia coli PA23]
gi|408154570|gb|EKH82901.1| ribosome recycling factor [Escherichia coli PA49]
gi|408159798|gb|EKH87850.1| ribosome recycling factor [Escherichia coli PA45]
gi|408168061|gb|EKH95514.1| ribosome recycling factor [Escherichia coli TT12B]
gi|408173849|gb|EKI00852.1| ribosome recycling factor [Escherichia coli MA6]
gi|408175510|gb|EKI02412.1| ribosome recycling factor [Escherichia coli 5905]
gi|408188037|gb|EKI13926.1| ribosome recycling factor [Escherichia coli CB7326]
gi|408193769|gb|EKI19287.1| ribosome recycling factor [Escherichia coli 5412]
gi|408194089|gb|EKI19589.1| ribosome recycling factor [Escherichia coli EC96038]
gi|408200412|gb|EKI25593.1| ribosome recycling factor [Escherichia coli TW15901]
gi|408219797|gb|EKI43915.1| ribosome recycling factor [Escherichia coli 3006]
gi|408232735|gb|EKI55903.1| ribosome recycling factor [Escherichia coli N1]
gi|408234530|gb|EKI57543.1| ribosome recycling factor [Escherichia coli PA38]
gi|408240963|gb|EKI63614.1| ribosome recycling factor [Escherichia coli EC1735]
gi|408250384|gb|EKI72244.1| ribosome recycling factor [Escherichia coli EC1736]
gi|408260959|gb|EKI82008.1| ribosome recycling factor [Escherichia coli EC1846]
gi|408269569|gb|EKI89814.1| ribosome recycling factor [Escherichia coli EC1847]
gi|408271483|gb|EKI91610.1| ribosome recycling factor [Escherichia coli EC1848]
gi|408280443|gb|EKI99995.1| ribosome recycling factor [Escherichia coli EC1849]
gi|408286329|gb|EKJ05257.1| ribosome recycling factor [Escherichia coli EC1850]
gi|408289586|gb|EKJ08344.1| ribosome recycling factor [Escherichia coli EC1856]
gi|408301861|gb|EKJ19422.1| ribosome recycling factor [Escherichia coli EC1862]
gi|408302065|gb|EKJ19614.1| ribosome recycling factor [Escherichia coli EC1864]
gi|408303289|gb|EKJ20755.1| ribosome recycling factor [Escherichia coli EC1866]
gi|408311113|gb|EKJ28125.1| ribosome recycling factor [Escherichia coli EC1865]
gi|408319619|gb|EKJ35741.1| ribosome recycling factor [Escherichia coli EC1868]
gi|408320290|gb|EKJ36393.1| ribosome recycling factor [Escherichia coli EC1870]
gi|408332531|gb|EKJ47566.1| ribosome recycling factor [Escherichia coli EC1869]
gi|408338517|gb|EKJ53165.1| ribosome recycling factor [Escherichia coli NE098]
gi|408348571|gb|EKJ62667.1| ribosome recycling factor [Escherichia coli 0.1288]
gi|408351189|gb|EKJ64980.1| ribosome recycling factor [Escherichia coli FRIK523]
gi|408353699|gb|EKJ67194.1| ribosome recycling factor [Escherichia coli 0.1304]
gi|408459557|gb|EKJ83338.1| ribosome recycling factor [Escherichia coli AD30]
gi|408560570|gb|EKK36833.1| ribosome recycling factor [Escherichia coli 5.2239]
gi|408560975|gb|EKK37223.1| ribosome recycling factor [Escherichia coli 3.4870]
gi|408574460|gb|EKK50230.1| ribosome recycling factor [Escherichia coli 8.0569]
gi|408586241|gb|EKK61024.1| ribosome recycling factor [Escherichia coli 8.0586]
gi|408592172|gb|EKK66565.1| ribosome recycling factor [Escherichia coli 8.2524]
gi|408593924|gb|EKK68232.1| ribosome recycling factor [Escherichia coli 10.0833]
gi|408613542|gb|EKK86830.1| ribosome recycling factor [Escherichia coli 88.0221]
gi|408618385|gb|EKK91472.1| ribosome recycling factor [Escherichia coli 10.0821]
gi|412961427|emb|CCK45332.1| ribosome releasing factor [Escherichia coli chi7122]
gi|412968029|emb|CCJ42642.1| ribosome releasing factor [Escherichia coli]
gi|421933631|gb|EKT91418.1| ribosome recycling factor [Escherichia coli O111:H8 str.
CFSAN001632]
gi|421947729|gb|EKU04792.1| ribosome recycling factor [Escherichia coli O26:H11 str.
CFSAN001629]
gi|421949571|gb|EKU06505.1| ribosome recycling factor [Escherichia coli O111:H11 str.
CFSAN001630]
gi|427215878|gb|EKV85044.1| ribosome recycling factor [Escherichia coli 88.1042]
gi|427219320|gb|EKV88289.1| ribosome recycling factor [Escherichia coli 89.0511]
gi|427219570|gb|EKV88532.1| ribosome recycling factor [Escherichia coli 88.1467]
gi|427235242|gb|EKW02864.1| ribosome recycling factor [Escherichia coli 90.0039]
gi|427235454|gb|EKW03075.1| ribosome recycling factor [Escherichia coli 90.2281]
gi|427238025|gb|EKW05547.1| ribosome recycling factor [Escherichia coli 90.0091]
gi|427252406|gb|EKW18895.1| ribosome recycling factor [Escherichia coli 93.0056]
gi|427254103|gb|EKW20471.1| ribosome recycling factor [Escherichia coli 93.0055]
gi|427255286|gb|EKW21557.1| ribosome recycling factor [Escherichia coli 94.0618]
gi|427272301|gb|EKW37054.1| ribosome recycling factor [Escherichia coli 95.0183]
gi|427278549|gb|EKW43006.1| ribosome recycling factor [Escherichia coli 95.1288]
gi|427287281|gb|EKW51049.1| ribosome recycling factor [Escherichia coli 96.0428]
gi|427293433|gb|EKW56687.1| ribosome recycling factor [Escherichia coli 96.0427]
gi|427295011|gb|EKW58165.1| ribosome recycling factor [Escherichia coli 96.0939]
gi|427305711|gb|EKW68305.1| ribosome recycling factor [Escherichia coli 97.0003]
gi|427307894|gb|EKW70318.1| ribosome recycling factor [Escherichia coli 96.0932]
gi|427312327|gb|EKW74483.1| ribosome recycling factor [Escherichia coli 96.0107]
gi|427322877|gb|EKW84498.1| ribosome recycling factor [Escherichia coli 97.1742]
gi|427335519|gb|EKW96549.1| ribosome recycling factor [Escherichia coli 99.0713]
gi|427335920|gb|EKW96949.1| ribosome recycling factor [Escherichia coli 99.0678]
gi|427337378|gb|EKW98296.1| ribosome recycling factor [Escherichia coli 99.0672]
gi|429260859|gb|EKY44390.1| ribosome recycling factor [Escherichia coli 96.0109]
gi|429262284|gb|EKY45627.1| ribosome recycling factor [Escherichia coli 97.0010]
gi|429352500|gb|EKY89215.1| ribosome-recycling factor [Escherichia coli O104:H4 str. 11-02030]
gi|429353556|gb|EKY90264.1| ribosome-recycling factor [Escherichia coli O104:H4 str.
11-02033-1]
gi|429354054|gb|EKY90759.1| ribosome-recycling factor [Escherichia coli O104:H4 str. 11-02092]
gi|429367544|gb|EKZ04138.1| ribosome-recycling factor [Escherichia coli O104:H4 str. 11-02093]
gi|429368696|gb|EKZ05282.1| ribosome-recycling factor [Escherichia coli O104:H4 str. 11-02281]
gi|429370922|gb|EKZ07485.1| ribosome-recycling factor [Escherichia coli O104:H4 str. 11-02318]
gi|429383296|gb|EKZ19757.1| ribosome-recycling factor [Escherichia coli O104:H4 str. 11-02913]
gi|429386145|gb|EKZ22595.1| ribosome-recycling factor [Escherichia coli O104:H4 str. 11-03439]
gi|429387058|gb|EKZ23503.1| ribosome-recycling factor [Escherichia coli O104:H4 str. 11-03943]
gi|429398318|gb|EKZ34661.1| ribosome-recycling factor [Escherichia coli O104:H4 str. 11-04080]
gi|429400034|gb|EKZ36352.1| ribosome-recycling factor [Escherichia coli O104:H4 str. Ec11-9450]
gi|429400368|gb|EKZ36685.1| ribosome-recycling factor [Escherichia coli O104:H4 str. Ec11-9990]
gi|429411459|gb|EKZ47669.1| ribosome-recycling factor [Escherichia coli O104:H4 str. Ec11-4984]
gi|429413031|gb|EKZ49221.1| ribosome-recycling factor [Escherichia coli O104:H4 str. Ec11-4986]
gi|429420083|gb|EKZ56217.1| ribosome-recycling factor [Escherichia coli O104:H4 str. Ec11-4987]
gi|429423945|gb|EKZ60052.1| ribosome-recycling factor [Escherichia coli O104:H4 str. Ec11-4988]
gi|429430102|gb|EKZ66169.1| ribosome-recycling factor [Escherichia coli O104:H4 str. Ec11-5603]
gi|429436044|gb|EKZ72061.1| ribosome-recycling factor [Escherichia coli O104:H4 str. Ec11-5604]
gi|429443228|gb|EKZ79181.1| ribosome-recycling factor [Escherichia coli O104:H4 str. Ec12-0465]
gi|429445650|gb|EKZ81591.1| ribosome-recycling factor [Escherichia coli O104:H4 str. Ec11-6006]
gi|429452119|gb|EKZ88006.1| ribosome-recycling factor [Escherichia coli O104:H4 str. Ec12-0466]
gi|429456970|gb|EKZ92813.1| ribosome-recycling factor [Escherichia coli O104:H4 str. Ec11-9941]
gi|430880122|gb|ELC03443.1| ribosome-recycling factor [Escherichia coli KTE4]
gi|430881136|gb|ELC04398.1| ribosome-recycling factor [Escherichia coli KTE5]
gi|430881383|gb|ELC04637.1| ribosome-recycling factor [Escherichia coli KTE2]
gi|430889824|gb|ELC12484.1| ribosome-recycling factor [Escherichia coli KTE10]
gi|430894396|gb|ELC16685.1| ribosome-recycling factor [Escherichia coli KTE12]
gi|430901951|gb|ELC23847.1| ribosome-recycling factor [Escherichia coli KTE15]
gi|430911085|gb|ELC32383.1| ribosome-recycling factor [Escherichia coli KTE16]
gi|430919048|gb|ELC39999.1| ribosome-recycling factor [Escherichia coli KTE25]
gi|430923678|gb|ELC44413.1| ribosome-recycling factor [Escherichia coli KTE21]
gi|430930365|gb|ELC50866.1| ribosome-recycling factor [Escherichia coli KTE26]
gi|430933284|gb|ELC53695.1| ribosome-recycling factor [Escherichia coli KTE28]
gi|430938892|gb|ELC59117.1| ribosome-recycling factor [Escherichia coli KTE39]
gi|430944548|gb|ELC64641.1| ribosome-recycling factor [Escherichia coli KTE44]
gi|430947883|gb|ELC67571.1| ribosome-recycling factor [Escherichia coli KTE178]
gi|430948463|gb|ELC68051.1| ribosome-recycling factor [Escherichia coli KTE181]
gi|430957638|gb|ELC76290.1| ribosome-recycling factor [Escherichia coli KTE187]
gi|430968205|gb|ELC85438.1| ribosome-recycling factor [Escherichia coli KTE188]
gi|430969915|gb|ELC87008.1| ribosome-recycling factor [Escherichia coli KTE189]
gi|430975519|gb|ELC92414.1| ribosome-recycling factor [Escherichia coli KTE193]
gi|430976742|gb|ELC93600.1| ribosome-recycling factor [Escherichia coli KTE191]
gi|430983326|gb|ELC99989.1| ribosome-recycling factor [Escherichia coli KTE204]
gi|430986882|gb|ELD03448.1| ribosome-recycling factor [Escherichia coli KTE201]
gi|430988227|gb|ELD04727.1| ribosome-recycling factor [Escherichia coli KTE205]
gi|431001482|gb|ELD17065.1| ribosome-recycling factor [Escherichia coli KTE206]
gi|431011633|gb|ELD25708.1| ribosome-recycling factor [Escherichia coli KTE210]
gi|431011858|gb|ELD25932.1| ribosome-recycling factor [Escherichia coli KTE208]
gi|431014226|gb|ELD27935.1| ribosome-recycling factor [Escherichia coli KTE213]
gi|431020038|gb|ELD33429.1| ribosome-recycling factor [Escherichia coli KTE212]
gi|431029773|gb|ELD42804.1| ribosome-recycling factor [Escherichia coli KTE214]
gi|431032547|gb|ELD45257.1| ribosome-recycling factor [Escherichia coli KTE220]
gi|431032916|gb|ELD45622.1| ribosome-recycling factor [Escherichia coli KTE216]
gi|431045499|gb|ELD55732.1| ribosome-recycling factor [Escherichia coli KTE224]
gi|431046202|gb|ELD56321.1| ribosome-recycling factor [Escherichia coli KTE228]
gi|431055653|gb|ELD65192.1| ribosome-recycling factor [Escherichia coli KTE230]
gi|431057810|gb|ELD67228.1| ribosome-recycling factor [Escherichia coli KTE233]
gi|431064866|gb|ELD73724.1| ribosome-recycling factor [Escherichia coli KTE234]
gi|431065148|gb|ELD73925.1| ribosome-recycling factor [Escherichia coli KTE235]
gi|431068270|gb|ELD76775.1| ribosome-recycling factor [Escherichia coli KTE236]
gi|431086705|gb|ELD92727.1| ribosome-recycling factor [Escherichia coli KTE237]
gi|431087908|gb|ELD93829.1| ribosome-recycling factor [Escherichia coli KTE47]
gi|431094820|gb|ELE00449.1| ribosome-recycling factor [Escherichia coli KTE49]
gi|431101055|gb|ELE06024.1| ribosome-recycling factor [Escherichia coli KTE51]
gi|431103623|gb|ELE08266.1| ribosome-recycling factor [Escherichia coli KTE53]
gi|431109840|gb|ELE13790.1| ribosome-recycling factor [Escherichia coli KTE56]
gi|431111792|gb|ELE15683.1| ribosome-recycling factor [Escherichia coli KTE55]
gi|431123124|gb|ELE25867.1| ribosome-recycling factor [Escherichia coli KTE57]
gi|431124402|gb|ELE27048.1| ribosome-recycling factor [Escherichia coli KTE58]
gi|431133735|gb|ELE35702.1| ribosome-recycling factor [Escherichia coli KTE60]
gi|431134666|gb|ELE36615.1| ribosome-recycling factor [Escherichia coli KTE62]
gi|431142305|gb|ELE44055.1| ribosome-recycling factor [Escherichia coli KTE67]
gi|431144720|gb|ELE46414.1| ribosome-recycling factor [Escherichia coli KTE66]
gi|431152508|gb|ELE53459.1| ribosome-recycling factor [Escherichia coli KTE72]
gi|431153203|gb|ELE54122.1| ribosome-recycling factor [Escherichia coli KTE76]
gi|431158683|gb|ELE59281.1| ribosome-recycling factor [Escherichia coli KTE75]
gi|431165468|gb|ELE65821.1| ribosome-recycling factor [Escherichia coli KTE80]
gi|431166082|gb|ELE66409.1| ribosome-recycling factor [Escherichia coli KTE77]
gi|431174756|gb|ELE74792.1| ribosome-recycling factor [Escherichia coli KTE81]
gi|431176088|gb|ELE76074.1| ribosome-recycling factor [Escherichia coli KTE83]
gi|431185584|gb|ELE85313.1| ribosome-recycling factor [Escherichia coli KTE86]
gi|431194827|gb|ELE94042.1| ribosome-recycling factor [Escherichia coli KTE87]
gi|431196262|gb|ELE95207.1| ribosome-recycling factor [Escherichia coli KTE93]
gi|431204260|gb|ELF02833.1| ribosome-recycling factor [Escherichia coli KTE111]
gi|431205366|gb|ELF03859.1| ribosome-recycling factor [Escherichia coli KTE116]
gi|431207949|gb|ELF06179.1| ribosome-recycling factor [Escherichia coli KTE142]
gi|431214698|gb|ELF12452.1| ribosome-recycling factor [Escherichia coli KTE119]
gi|431225540|gb|ELF22740.1| ribosome-recycling factor [Escherichia coli KTE143]
gi|431225969|gb|ELF23155.1| ribosome-recycling factor [Escherichia coli KTE156]
gi|431232628|gb|ELF28294.1| ribosome-recycling factor [Escherichia coli KTE161]
gi|431237879|gb|ELF32861.1| ribosome-recycling factor [Escherichia coli KTE162]
gi|431247667|gb|ELF41888.1| ribosome-recycling factor [Escherichia coli KTE169]
gi|431248115|gb|ELF42324.1| ribosome-recycling factor [Escherichia coli KTE171]
gi|431252738|gb|ELF46252.1| ribosome-recycling factor [Escherichia coli KTE6]
gi|431260403|gb|ELF52501.1| ribosome-recycling factor [Escherichia coli KTE8]
gi|431267305|gb|ELF58823.1| ribosome-recycling factor [Escherichia coli KTE9]
gi|431268985|gb|ELF60346.1| ribosome-recycling factor [Escherichia coli KTE17]
gi|431277430|gb|ELF68444.1| ribosome-recycling factor [Escherichia coli KTE18]
gi|431278907|gb|ELF69880.1| ribosome-recycling factor [Escherichia coli KTE45]
gi|431287322|gb|ELF78140.1| ribosome-recycling factor [Escherichia coli KTE23]
gi|431287906|gb|ELF78692.1| ribosome-recycling factor [Escherichia coli KTE42]
gi|431291655|gb|ELF82158.1| ribosome-recycling factor [Escherichia coli KTE29]
gi|431296470|gb|ELF86182.1| ribosome-recycling factor [Escherichia coli KTE43]
gi|431297587|gb|ELF87237.1| ribosome-recycling factor [Escherichia coli KTE22]
gi|431302396|gb|ELF91582.1| ribosome-recycling factor [Escherichia coli KTE46]
gi|431314529|gb|ELG02481.1| ribosome-recycling factor [Escherichia coli KTE48]
gi|431320137|gb|ELG07785.1| ribosome-recycling factor [Escherichia coli KTE50]
gi|431321832|gb|ELG09432.1| ribosome-recycling factor [Escherichia coli KTE54]
gi|431331689|gb|ELG18935.1| ribosome-recycling factor [Escherichia coli KTE59]
gi|431332952|gb|ELG20173.1| ribosome-recycling factor [Escherichia coli KTE63]
gi|431333767|gb|ELG20952.1| ribosome-recycling factor [Escherichia coli KTE65]
gi|431343065|gb|ELG30035.1| ribosome-recycling factor [Escherichia coli KTE78]
gi|431346581|gb|ELG33486.1| ribosome-recycling factor [Escherichia coli KTE79]
gi|431352027|gb|ELG38813.1| ribosome-recycling factor [Escherichia coli KTE91]
gi|431358424|gb|ELG45082.1| ribosome-recycling factor [Escherichia coli KTE101]
gi|431359380|gb|ELG46025.1| ribosome-recycling factor [Escherichia coli KTE115]
gi|431371281|gb|ELG57066.1| ribosome-recycling factor [Escherichia coli KTE118]
gi|431375035|gb|ELG60379.1| ribosome-recycling factor [Escherichia coli KTE123]
gi|431380811|gb|ELG65450.1| ribosome-recycling factor [Escherichia coli KTE135]
gi|431389371|gb|ELG73084.1| ribosome-recycling factor [Escherichia coli KTE136]
gi|431392561|gb|ELG76134.1| ribosome-recycling factor [Escherichia coli KTE140]
gi|431395488|gb|ELG79000.1| ribosome-recycling factor [Escherichia coli KTE144]
gi|431398201|gb|ELG81624.1| ribosome-recycling factor [Escherichia coli KTE141]
gi|431406059|gb|ELG89291.1| ribosome-recycling factor [Escherichia coli KTE147]
gi|431408718|gb|ELG91901.1| ribosome-recycling factor [Escherichia coli KTE146]
gi|431415225|gb|ELG97775.1| ribosome-recycling factor [Escherichia coli KTE154]
gi|431420787|gb|ELH03063.1| ribosome-recycling factor [Escherichia coli KTE158]
gi|431426168|gb|ELH08213.1| ribosome-recycling factor [Escherichia coli KTE165]
gi|431430987|gb|ELH12766.1| ribosome-recycling factor [Escherichia coli KTE192]
gi|431438601|gb|ELH19975.1| ribosome-recycling factor [Escherichia coli KTE194]
gi|431448444|gb|ELH29161.1| ribosome-recycling factor [Escherichia coli KTE173]
gi|431448778|gb|ELH29491.1| ribosome-recycling factor [Escherichia coli KTE190]
gi|431450095|gb|ELH30587.1| ribosome-recycling factor [Escherichia coli KTE175]
gi|431456467|gb|ELH36811.1| ribosome-recycling factor [Escherichia coli KTE183]
gi|431457441|gb|ELH37780.1| ribosome-recycling factor [Escherichia coli KTE184]
gi|431464667|gb|ELH44786.1| ribosome-recycling factor [Escherichia coli KTE196]
gi|431472553|gb|ELH52441.1| ribosome-recycling factor [Escherichia coli KTE197]
gi|431475673|gb|ELH55477.1| ribosome-recycling factor [Escherichia coli KTE203]
gi|431483394|gb|ELH63086.1| ribosome-recycling factor [Escherichia coli KTE202]
gi|431483834|gb|ELH63523.1| ribosome-recycling factor [Escherichia coli KTE209]
gi|431487750|gb|ELH67394.1| ribosome-recycling factor [Escherichia coli KTE207]
gi|431498509|gb|ELH77695.1| ribosome-recycling factor [Escherichia coli KTE211]
gi|431500016|gb|ELH79033.1| ribosome-recycling factor [Escherichia coli KTE217]
gi|431507960|gb|ELH86242.1| ribosome-recycling factor [Escherichia coli KTE215]
gi|431511666|gb|ELH89797.1| ribosome-recycling factor [Escherichia coli KTE218]
gi|431516157|gb|ELH93771.1| ribosome-recycling factor [Escherichia coli KTE223]
gi|431518664|gb|ELH96118.1| ribosome-recycling factor [Escherichia coli KTE227]
gi|431519132|gb|ELH96584.1| ribosome-recycling factor [Escherichia coli KTE229]
gi|431527967|gb|ELI04681.1| ribosome-recycling factor [Escherichia coli KTE106]
gi|431536914|gb|ELI13070.1| ribosome-recycling factor [Escherichia coli KTE104]
gi|431538076|gb|ELI14181.1| ribosome-recycling factor [Escherichia coli KTE105]
gi|431546907|gb|ELI21294.1| ribosome-recycling factor [Escherichia coli KTE109]
gi|431557205|gb|ELI30979.1| ribosome-recycling factor [Escherichia coli KTE113]
gi|431561311|gb|ELI34695.1| ribosome-recycling factor [Escherichia coli KTE117]
gi|431561512|gb|ELI34881.1| ribosome-recycling factor [Escherichia coli KTE112]
gi|431574065|gb|ELI46850.1| ribosome-recycling factor [Escherichia coli KTE120]
gi|431575437|gb|ELI48172.1| ribosome-recycling factor [Escherichia coli KTE124]
gi|431576478|gb|ELI49165.1| ribosome-recycling factor [Escherichia coli KTE122]
gi|431589657|gb|ELI60871.1| ribosome-recycling factor [Escherichia coli KTE125]
gi|431593153|gb|ELI63717.1| ribosome-recycling factor [Escherichia coli KTE128]
gi|431595632|gb|ELI65625.1| ribosome-recycling factor [Escherichia coli KTE129]
gi|431603324|gb|ELI72750.1| ribosome-recycling factor [Escherichia coli KTE131]
gi|431607328|gb|ELI76698.1| ribosome-recycling factor [Escherichia coli KTE133]
gi|431610726|gb|ELI80011.1| ribosome-recycling factor [Escherichia coli KTE137]
gi|431616291|gb|ELI85358.1| ribosome-recycling factor [Escherichia coli KTE138]
gi|431620790|gb|ELI89617.1| ribosome-recycling factor [Escherichia coli KTE139]
gi|431624033|gb|ELI92657.1| ribosome-recycling factor [Escherichia coli KTE145]
gi|431633513|gb|ELJ01793.1| ribosome-recycling factor [Escherichia coli KTE150]
gi|431634799|gb|ELJ03020.1| ribosome-recycling factor [Escherichia coli KTE148]
gi|431637635|gb|ELJ05690.1| ribosome-recycling factor [Escherichia coli KTE153]
gi|431650472|gb|ELJ17793.1| ribosome-recycling factor [Escherichia coli KTE157]
gi|431650981|gb|ELJ18288.1| ribosome-recycling factor [Escherichia coli KTE160]
gi|431652352|gb|ELJ19506.1| ribosome-recycling factor [Escherichia coli KTE163]
gi|431663929|gb|ELJ30681.1| ribosome-recycling factor [Escherichia coli KTE166]
gi|431665871|gb|ELJ32580.1| ribosome-recycling factor [Escherichia coli KTE167]
gi|431668050|gb|ELJ34626.1| ribosome-recycling factor [Escherichia coli KTE168]
gi|431679121|gb|ELJ45037.1| ribosome-recycling factor [Escherichia coli KTE176]
gi|431679253|gb|ELJ45166.1| ribosome-recycling factor [Escherichia coli KTE174]
gi|431683277|gb|ELJ48915.1| ribosome-recycling factor [Escherichia coli KTE177]
gi|431693344|gb|ELJ58760.1| ribosome-recycling factor [Escherichia coli KTE179]
gi|431695153|gb|ELJ60489.1| ribosome-recycling factor [Escherichia coli KTE180]
gi|431697241|gb|ELJ62386.1| ribosome-recycling factor [Escherichia coli KTE232]
gi|431699562|gb|ELJ64567.1| ribosome-recycling factor [Escherichia coli KTE88]
gi|431711708|gb|ELJ76021.1| ribosome-recycling factor [Escherichia coli KTE82]
gi|431712760|gb|ELJ77038.1| ribosome-recycling factor [Escherichia coli KTE85]
gi|431723782|gb|ELJ87727.1| ribosome-recycling factor [Escherichia coli KTE90]
gi|431726639|gb|ELJ90447.1| ribosome-recycling factor [Escherichia coli KTE94]
gi|431727337|gb|ELJ91097.1| ribosome-recycling factor [Escherichia coli KTE95]
gi|431733941|gb|ELJ97344.1| ribosome-recycling factor [Escherichia coli KTE97]
gi|431736513|gb|ELJ99838.1| ribosome-recycling factor [Escherichia coli KTE99]
gi|432346606|gb|ELL41087.1| ribosome recycling factor [Escherichia coli J96]
gi|441608842|emb|CCP95506.1| Ribosome recycling factor [Escherichia coli O10:K5(L):H4 str. ATCC
23506]
gi|441653476|emb|CCQ03805.1| Ribosome recycling factor [Escherichia coli O5:K4(L):H4 str. ATCC
23502]
gi|441711437|emb|CCQ08051.1| Ribosome recycling factor [Escherichia coli Nissle 1917]
gi|443420691|gb|AGC85595.1| ribosome recycling factor [Escherichia coli APEC O78]
gi|444543498|gb|ELV22760.1| ribosome recycling factor [Escherichia coli 99.0814]
gi|444552201|gb|ELV30044.1| ribosome recycling factor [Escherichia coli 09BKT078844]
gi|444552591|gb|ELV30378.1| ribosome recycling factor [Escherichia coli 99.0815]
gi|444566148|gb|ELV42984.1| ribosome recycling factor [Escherichia coli 99.0839]
gi|444568470|gb|ELV45145.1| ribosome recycling factor [Escherichia coli 99.0816]
gi|444573020|gb|ELV49421.1| ribosome recycling factor [Escherichia coli 99.0848]
gi|444601115|gb|ELV75924.1| ribosome recycling factor [Escherichia coli ATCC 700728]
gi|444601447|gb|ELV76254.1| ribosome recycling factor [Escherichia coli PA11]
gi|444610057|gb|ELV84493.1| ribosome recycling factor [Escherichia coli 99.1805]
gi|444616178|gb|ELV90348.1| ribosome recycling factor [Escherichia coli PA13]
gi|444616586|gb|ELV90748.1| ribosome recycling factor [Escherichia coli PA19]
gi|444625223|gb|ELV99094.1| ribosome recycling factor [Escherichia coli PA2]
gi|444633765|gb|ELW07268.1| ribosome recycling factor [Escherichia coli PA48]
gi|444634091|gb|ELW07582.1| ribosome recycling factor [Escherichia coli PA47]
gi|444639392|gb|ELW12711.1| ribosome recycling factor [Escherichia coli PA8]
gi|444651350|gb|ELW24159.1| ribosome recycling factor [Escherichia coli 99.1781]
gi|444655375|gb|ELW27994.1| ribosome recycling factor [Escherichia coli 99.1762]
gi|444664553|gb|ELW36741.1| ribosome recycling factor [Escherichia coli PA35]
gi|444668836|gb|ELW40836.1| ribosome recycling factor [Escherichia coli 3.4880]
gi|444673735|gb|ELW45361.1| ribosome recycling factor [Escherichia coli 95.0083]
gi|444675177|gb|ELW46658.1| ribosome recycling factor [Escherichia coli 99.0670]
gi|449323630|gb|EMD13583.1| ribosome recycling factor [Escherichia coli O08]
gi|449325378|gb|EMD15285.1| ribosome recycling factor [Escherichia coli SEPT362]
gi|449325755|gb|EMD15657.1| ribosome recycling factor [Escherichia coli S17]
Length = 185
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 89/126 (70%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
S I KD + RM++ ++ +T + +RTGR++P++LD I VEYYG+P L+ +A + DS
Sbjct: 3 SDIRKDAEVRMDKCVEAFKTQISKIRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVEDS 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
+L I +D+S ++EKAI++SDLG+ PN+ G IR+ LP LT ERRK+L+K+V +AE
Sbjct: 63 RTLKINVFDRSMSPAVEKAIMASDLGLNPNSAGSDIRVPLPPLTEERRKDLTKIVRGEAE 122
Query: 214 EGKVVM 219
+ +V +
Sbjct: 123 QARVAV 128
>gi|373499225|ref|ZP_09589716.1| ribosome-recycling factor [Fusobacterium sp. 12_1B]
gi|404369363|ref|ZP_10974703.1| ribosome-recycling factor [Fusobacterium ulcerans ATCC 49185]
gi|313690747|gb|EFS27582.1| ribosome-recycling factor [Fusobacterium ulcerans ATCC 49185]
gi|371959296|gb|EHO76987.1| ribosome-recycling factor [Fusobacterium sp. 12_1B]
Length = 188
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 54/117 (46%), Positives = 85/117 (72%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M + I+ + F S+R GR++ +MLD ++VE YGS + L + ++ P++ L+I P+D
Sbjct: 13 KMGKAIEATKHKFTSIRAGRASVSMLDSVKVEQYGSDMPLNQVGSVSAPEARLLVIDPWD 72
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
KS + IEKAI++++LG+TPNNDG+VIRL +P+LT+ERRKE K+ +AE GKV +
Sbjct: 73 KSLISKIEKAIMAANLGLTPNNDGKVIRLVMPELTAERRKEYVKMAKTEAENGKVAV 129
>gi|260588561|ref|ZP_05854474.1| ribosome recycling factor [Blautia hansenii DSM 20583]
gi|331082136|ref|ZP_08331264.1| ribosome recycling factor [Lachnospiraceae bacterium 6_1_63FAA]
gi|260541036|gb|EEX21605.1| ribosome recycling factor [Blautia hansenii DSM 20583]
gi|330405731|gb|EGG85261.1| ribosome recycling factor [Lachnospiraceae bacterium 6_1_63FAA]
Length = 185
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/117 (47%), Positives = 83/117 (70%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M +T++ + ++R GR+NP +LDK+ V+YYG+P L+ +A I P++ + IQP++
Sbjct: 13 KMTKTLEGLTKELVTIRAGRANPHILDKLTVDYYGTPTPLQQVANITVPEARMIQIQPWE 72
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
S +K I KAI+SSDL + PN+DG++IRL LP+LT ERRKEL K V K+ E KV +
Sbjct: 73 ASLIKEISKAILSSDLNLNPNSDGKIIRLVLPELTEERRKELVKDVKKKGEAAKVAV 129
>gi|68536249|ref|YP_250954.1| ribosome recycling factor [Corynebacterium jeikeium K411]
gi|260578949|ref|ZP_05846852.1| ribosome recycling factor [Corynebacterium jeikeium ATCC 43734]
gi|123650872|sp|Q4JV21.1|RRF_CORJK RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|68263848|emb|CAI37336.1| frr [Corynebacterium jeikeium K411]
gi|258602923|gb|EEW16197.1| ribosome recycling factor [Corynebacterium jeikeium ATCC 43734]
Length = 185
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 83/117 (70%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
RM +++ R + ++RTGR+NP+M + + EYYG P + +A I+ P+ LLI+PY+
Sbjct: 12 RMTSSVEHAREDLTTIRTGRANPSMFNGVVAEYYGVPTPITQMATISVPEPRMLLIKPYE 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
+S++ +IE AI +SDLG+ P NDG+V+R+T+PQLT ERRKE+ KV + E+ K+ +
Sbjct: 72 QSTMDAIENAIRNSDLGVNPTNDGQVLRVTIPQLTEERRKEMVKVAKSKGEDAKIAI 128
>gi|422758451|ref|ZP_16812213.1| ribosome recycling factor [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
gi|322411286|gb|EFY02194.1| ribosome recycling factor [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
Length = 185
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 54/103 (52%), Positives = 76/103 (73%)
Query: 115 FNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIV 174
+ S+R GR+N ++LD+I+++YYG+P L +A I P++ LLI P+DKSS+K IE+A+
Sbjct: 24 YASIRAGRANASLLDRIQIDYYGAPTPLNQLASITVPEARVLLISPFDKSSIKDIERALN 83
Query: 175 SSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
+SDLG+TP NDG VIRL +P LT E RKEL+K V K E K+
Sbjct: 84 ASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGENAKI 126
>gi|119717464|ref|YP_924429.1| ribosome recycling factor [Nocardioides sp. JS614]
gi|166230809|sp|A1SLQ7.1|RRF_NOCSJ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|119538125|gb|ABL82742.1| ribosome recycling factor [Nocardioides sp. JS614]
Length = 185
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 84/126 (66%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+ I + +M+++++ R F ++R GR NP+M +KI V+YYGSP L+ +A P++
Sbjct: 3 NDILNEADGKMDKSVEATREEFAAIRAGRVNPSMFNKIVVDYYGSPTPLQQLASFTAPEA 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
+LI PYD+ ++ +I KAI SDLG+ P +DG+VIR P+LT ERRKE K+ +AE
Sbjct: 63 RIILIAPYDQGAMHNILKAIRDSDLGVNPADDGKVIRCVFPELTEERRKEYIKISRHKAE 122
Query: 214 EGKVVM 219
EG+V +
Sbjct: 123 EGRVAV 128
>gi|313891269|ref|ZP_07824887.1| ribosome recycling factor [Streptococcus pseudoporcinus SPIN 20026]
gi|416852941|ref|ZP_11910086.1| ribosome recycling factor [Streptococcus pseudoporcinus LQ 940-04]
gi|313120336|gb|EFR43457.1| ribosome recycling factor [Streptococcus pseudoporcinus SPIN 20026]
gi|356740430|gb|EHI65662.1| ribosome recycling factor [Streptococcus pseudoporcinus LQ 940-04]
Length = 185
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 82/119 (68%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K R E++ + + S+R GR+N ++LD+I+V+YYG+P L ++ I P++ LLI P
Sbjct: 10 KQRFEQSFQSLSREYASIRAGRANASLLDRIQVDYYGAPTPLNQLSSITVPEARVLLISP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
+DK+S+K IE+AI +SDLG+TP NDG VIRL +P LT E RK L+K V K E KV +
Sbjct: 70 FDKNSIKDIERAINASDLGITPANDGSVIRLVIPALTEETRKNLAKEVKKVGENQKVAI 128
>gi|154506087|ref|ZP_02042825.1| hypothetical protein RUMGNA_03629 [Ruminococcus gnavus ATCC 29149]
gi|336433435|ref|ZP_08613255.1| ribosome-recycling factor [Lachnospiraceae bacterium 2_1_58FAA]
gi|153793586|gb|EDN76006.1| ribosome recycling factor [Ruminococcus gnavus ATCC 29149]
gi|336016366|gb|EGN46153.1| ribosome-recycling factor [Lachnospiraceae bacterium 2_1_58FAA]
Length = 183
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 82/117 (70%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+M +TI+ + + ++R GR+NP +LDK+ V+YYG P ++ A I+ P++ + IQP++
Sbjct: 11 KMTKTINNLGSELAAIRAGRANPHVLDKLTVDYYGVPTPIQQAANISVPEARMIQIQPWE 70
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
KS LK IEKAI+ SD+G+ P NDG V+RL P+LT ERRKEL K V K+ E KV +
Sbjct: 71 KSMLKEIEKAILMSDIGINPTNDGTVVRLMFPELTEERRKELVKDVKKKGEAAKVAI 127
>gi|357417810|ref|YP_004930830.1| ribosome recycling factor [Pseudoxanthomonas spadix BD-a59]
gi|355335388|gb|AER56789.1| ribosome recycling factor [Pseudoxanthomonas spadix BD-a59]
Length = 185
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 87/126 (69%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+ I+KD +ARM ++I+ +R + +RTGR+ A++D ++V YYGS + L +A + D+
Sbjct: 3 NDIKKDAQARMNKSIESLRHDLTKLRTGRATTALVDHLKVNYYGSDMPLTQVASVVVSDA 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
SL I P++K + ++EKAI+ SDLG+TPN G VIR+ +P LT ERR++LSKVV E
Sbjct: 63 RSLTITPWEKQMVSAVEKAILGSDLGLTPNTAGTVIRINIPALTEERRRDLSKVVHANGE 122
Query: 214 EGKVVM 219
+ KV +
Sbjct: 123 DAKVAI 128
>gi|433608821|ref|YP_007041190.1| Ribosome-recycling factor [Saccharothrix espanaensis DSM 44229]
gi|407886674|emb|CCH34317.1| Ribosome-recycling factor [Saccharothrix espanaensis DSM 44229]
Length = 185
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 81/119 (68%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + +ME+ + + + + +VRTGR+ P+M +I VEYYGSP L +A + P++ ++
Sbjct: 8 DAEEKMEKAVSVAKEDLAAVRTGRATPSMFSRIVVEYYGSPTPLNQLASVAIPEARMAVV 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
+PYD S L +EKAI SDLG+ P+NDG VIR+ +PQL+ ERR+E+ KV + E+ KV
Sbjct: 68 KPYDASQLNQVEKAIRDSDLGVNPSNDGAVIRVVIPQLSEERRREMVKVAKSKGEDAKV 126
>gi|392946632|ref|ZP_10312274.1| ribosome recycling factor [Frankia sp. QA3]
gi|392289926|gb|EIV95950.1| ribosome recycling factor [Frankia sp. QA3]
Length = 185
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 84/119 (70%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + +ME+ + + + +F ++RTGR PA+ KI V+YYG+P ++ +A + P+ ++I
Sbjct: 8 DAEEKMEKAVSVAKEDFANIRTGRITPAVFSKILVDYYGAPTPVQQLASFHIPEPRMVII 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
PYDKSSL SIEKA+ SDLG+ P+NDG +IR+ P+L+ +RR++L KV +AEE +V
Sbjct: 68 TPYDKSSLASIEKAVRDSDLGVNPSNDGTIIRIVFPELSEQRRRDLVKVARSKAEEARV 126
>gi|313885301|ref|ZP_07819052.1| ribosome recycling factor [Eremococcus coleocola ACS-139-V-Col8]
gi|312619407|gb|EFR30845.1| ribosome recycling factor [Eremococcus coleocola ACS-139-V-Col8]
Length = 185
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/124 (46%), Positives = 83/124 (66%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+I K+ K RM ++++ S+R G +N ++LD+I+V YYG P L +A I P++
Sbjct: 3 DTILKETKDRMAKSVEAFSRELASIRAGVANASILDRIQVTYYGVPTPLNQLASITVPEA 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
LL+ PYDKSS IEKAI+ SD+G+ P +DG+VIRL +P LT ERR+EL KVV K+ E
Sbjct: 63 RMLLVTPYDKSSTTEIEKAILQSDVGINPTSDGDVIRLVIPALTKERREELVKVVGKENE 122
Query: 214 EGKV 217
K+
Sbjct: 123 TAKI 126
>gi|386823780|ref|ZP_10110922.1| ribosome recycling factor [Serratia plymuthica PRI-2C]
gi|386379320|gb|EIJ20115.1| ribosome recycling factor [Serratia plymuthica PRI-2C]
Length = 185
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/126 (46%), Positives = 89/126 (70%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+ I KD +RME++++ + + +RTGR++P++LD I VEYYGS L+ +A + DS
Sbjct: 3 NEIRKDADSRMEKSVEAFKNQISKIRTGRASPSILDGIMVEYYGSATPLRQLANVTVEDS 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
+L I +D+S ++EKAI+SSDLG+ P++ G VIR+ LP LT ERRK+L KVV +AE
Sbjct: 63 RTLAINLFDRSLGSAVEKAIMSSDLGLNPSSAGSVIRVPLPPLTEERRKDLIKVVRNEAE 122
Query: 214 EGKVVM 219
+G+V +
Sbjct: 123 QGRVAV 128
>gi|85712041|ref|ZP_01043095.1| Ribosome recycling factor [Idiomarina baltica OS145]
gi|85694227|gb|EAQ32171.1| Ribosome recycling factor [Idiomarina baltica OS145]
Length = 185
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/126 (46%), Positives = 90/126 (71%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+ I KD K RME++++ +R+ + VRTGR++P++LD + V YYG LK +A I T DS
Sbjct: 3 NDIIKDAKERMEKSVESLRSQMSKVRTGRAHPSILDSVMVNYYGVDTPLKQLANITTEDS 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
+L + +DKSS +++EKAI++SDLG+ P + G VIR+ LP LT ERR++L K+V +AE
Sbjct: 63 RTLALTVFDKSSAQAVEKAILTSDLGLNPASAGAVIRIPLPPLTEERRRDLVKIVRAEAE 122
Query: 214 EGKVVM 219
+ +V +
Sbjct: 123 QARVAV 128
>gi|37926485|pdb|1ISE|A Chain A, Crystal Structure Of A Mutant Of Ribosome Recycling Factor
From Escherichia Coli, Arg132gly
Length = 185
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 89/126 (70%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
S I KD + RM++ ++ +T + +RTGR++P++LD I VEYYG+P L+ +A + DS
Sbjct: 3 SDIRKDAEVRMDKCVEAFKTQISKIRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVEDS 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
+L I +D+S ++EKAI++SDLG+ PN+ G IR+ LP LT ERRK+L+K+V +AE
Sbjct: 63 RTLKINVFDRSMSPAVEKAIMASDLGLNPNSAGSDIRVPLPPLTEERRKDLTKIVRGEAE 122
Query: 214 EGKVVM 219
+ +V +
Sbjct: 123 QARVAV 128
>gi|409973972|pdb|4GD1|Y Chain Y, Structures Of The Bacterial Ribosome In Classical And
Hybrid States Of Trna Binding
Length = 183
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 89/126 (70%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
S I KD + RM++ ++ +T + +RTGR++P++LD I VEYYG+P L+ +A + DS
Sbjct: 3 SDIRKDAEVRMDKCVEAFKTQISKIRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVEDS 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
+L I +D+S ++EKAI++SDLG+ PN+ G IR+ LP LT ERRK+L+K+V +AE
Sbjct: 63 RTLKINVFDRSMSPAVEKAIMASDLGLNPNSAGSDIRVPLPPLTEERRKDLTKIVRGEAE 122
Query: 214 EGKVVM 219
+ +V +
Sbjct: 123 QARVAV 128
>gi|257869600|ref|ZP_05649253.1| ribosome recycling factor [Enterococcus gallinarum EG2]
gi|357050796|ref|ZP_09111992.1| ribosome-recycling factor [Enterococcus saccharolyticus 30_1]
gi|257803764|gb|EEV32586.1| ribosome recycling factor [Enterococcus gallinarum EG2]
gi|355380421|gb|EHG27557.1| ribosome-recycling factor [Enterococcus saccharolyticus 30_1]
Length = 185
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 84/121 (69%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+ K +M++ + ++ +R GR+N ++LD++ V YYG P L +A I P++ L+I
Sbjct: 8 EAKDKMKKAAENLQRELGQIRAGRANASILDRVMVTYYGVPTPLNQMASITIPEARILMI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
P+DK+ ++ +EKAI+ SD+G+TP NDG VIRL +PQLT ERRKEL+K V K+AE K+
Sbjct: 68 TPFDKTMIQEVEKAIMQSDIGITPANDGTVIRLVIPQLTEERRKELAKDVKKEAENAKIA 127
Query: 219 M 219
+
Sbjct: 128 V 128
>gi|148656147|ref|YP_001276352.1| ribosome recycling factor [Roseiflexus sp. RS-1]
gi|166231220|sp|A5UUU9.1|RRF_ROSS1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|148568257|gb|ABQ90402.1| ribosome recycling factor [Roseiflexus sp. RS-1]
Length = 185
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 90/122 (73%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
++ ++RM++ + +R + ++RTGR++PA+++ + VE YG+ + L +A I P+ L+
Sbjct: 7 REAESRMKKATEALRNHLATIRTGRASPALVEHLHVEAYGATLPLNQLATITVPEPRLLV 66
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
IQP+D +++K+I KAI++S+LG+TP +DG VIRL +PQLT RRKEL+K+V + EE K+
Sbjct: 67 IQPFDANTVKAISKAIMNSELGITPTDDGRVIRLAIPQLTEARRKELTKLVRARVEESKI 126
Query: 218 VM 219
+
Sbjct: 127 AL 128
>gi|116749216|ref|YP_845903.1| ribosome recycling factor [Syntrophobacter fumaroxidans MPOB]
gi|166231522|sp|A0LJ66.1|RRF_SYNFM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|116698280|gb|ABK17468.1| ribosome recycling factor [Syntrophobacter fumaroxidans MPOB]
Length = 185
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 88/121 (72%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + RM + +D + T++ +RTGR++ +++D I EYYG+P +L +A I P+ +++I
Sbjct: 8 DARDRMSKALDNLETDYKRLRTGRASVSLVDGIRAEYYGTPTALNQLATITIPEPRTIMI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
QP+D S + IEK+I+ S+LG+TP +DG+VIR+ +P LT++RR+EL KVV K +EE KV
Sbjct: 68 QPWDTSVIGEIEKSILKSELGLTPMSDGKVIRINIPVLTADRRRELVKVVKKMSEESKVA 127
Query: 219 M 219
+
Sbjct: 128 V 128
>gi|422007779|ref|ZP_16354765.1| ribosome recycling factor [Providencia rettgeri Dmel1]
gi|414097669|gb|EKT59324.1| ribosome recycling factor [Providencia rettgeri Dmel1]
Length = 185
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/126 (46%), Positives = 90/126 (71%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+ I+KD + RME++++ + + VRTGR++P++LD I VEYYGS L+ +A + DS
Sbjct: 3 NEIQKDAQDRMEKSLEAFKNQISKVRTGRASPSLLDGITVEYYGSATPLRQLANVTVEDS 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
+L I +D+S +IEKAI++SDLG+ P++ G VIR+ LP LT ERRK+L KVV +AE
Sbjct: 63 RTLAISVFDRSMSPAIEKAIMASDLGLNPSSAGTVIRVPLPPLTEERRKDLIKVVRGEAE 122
Query: 214 EGKVVM 219
+G++ +
Sbjct: 123 QGRIAV 128
>gi|259501578|ref|ZP_05744480.1| ribosome recycling factor [Lactobacillus iners DSM 13335]
gi|302191448|ref|ZP_07267702.1| ribosome recycling factor [Lactobacillus iners AB-1]
gi|309804225|ref|ZP_07698302.1| ribosome recycling factor [Lactobacillus iners LactinV 11V1-d]
gi|309805502|ref|ZP_07699547.1| ribosome recycling factor [Lactobacillus iners LactinV 09V1-c]
gi|309807192|ref|ZP_07701166.1| ribosome recycling factor [Lactobacillus iners LactinV 03V1-b]
gi|309808808|ref|ZP_07702693.1| ribosome recycling factor [Lactobacillus iners LactinV 01V1-a]
gi|309809446|ref|ZP_07703304.1| ribosome recycling factor [Lactobacillus iners SPIN 2503V10-D]
gi|312875782|ref|ZP_07735774.1| ribosome recycling factor [Lactobacillus iners LEAF 2053A-b]
gi|315653424|ref|ZP_07906346.1| ribosome recycling factor [Lactobacillus iners ATCC 55195]
gi|325911800|ref|ZP_08174204.1| ribosome recycling factor [Lactobacillus iners UPII 143-D]
gi|325913480|ref|ZP_08175846.1| ribosome recycling factor [Lactobacillus iners UPII 60-B]
gi|329919873|ref|ZP_08276811.1| ribosome recycling factor [Lactobacillus iners SPIN 1401G]
gi|349612287|ref|ZP_08891508.1| ribosome-recycling factor [Lactobacillus sp. 7_1_47FAA]
gi|259167096|gb|EEW51591.1| ribosome recycling factor [Lactobacillus iners DSM 13335]
gi|308163628|gb|EFO65898.1| ribosome recycling factor [Lactobacillus iners LactinV 11V1-d]
gi|308165153|gb|EFO67391.1| ribosome recycling factor [Lactobacillus iners LactinV 09V1-c]
gi|308166413|gb|EFO68618.1| ribosome recycling factor [Lactobacillus iners LactinV 03V1-b]
gi|308167934|gb|EFO70067.1| ribosome recycling factor [Lactobacillus iners LactinV 01V1-a]
gi|308170118|gb|EFO72153.1| ribosome recycling factor [Lactobacillus iners SPIN 2503V10-D]
gi|311088686|gb|EFQ47138.1| ribosome recycling factor [Lactobacillus iners LEAF 2053A-b]
gi|315489349|gb|EFU78989.1| ribosome recycling factor [Lactobacillus iners ATCC 55195]
gi|325476306|gb|EGC79468.1| ribosome recycling factor [Lactobacillus iners UPII 143-D]
gi|325477249|gb|EGC80395.1| ribosome recycling factor [Lactobacillus iners UPII 60-B]
gi|328936963|gb|EGG33393.1| ribosome recycling factor [Lactobacillus iners SPIN 1401G]
gi|348608883|gb|EGY58850.1| ribosome-recycling factor [Lactobacillus sp. 7_1_47FAA]
Length = 185
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/124 (45%), Positives = 85/124 (68%), Gaps = 1/124 (0%)
Query: 96 IEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSS 155
IEK KA M ++I + +R G +N ++LD I+VEYYG P L ++ I P++
Sbjct: 6 IEK-AKANMSKSISVFEKELGGIRAGVANASLLDGIKVEYYGVPTPLTQMSSITIPEARV 64
Query: 156 LLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEG 215
L+I P+DK++L +IE AI++SDLG+TP NDG V+R+ +PQLT ERR E++K V K AE+
Sbjct: 65 LMITPFDKTTLNNIEHAILASDLGITPANDGSVVRIVIPQLTGERRIEIAKKVGKLAEQA 124
Query: 216 KVVM 219
K+ +
Sbjct: 125 KIAI 128
>gi|350427675|ref|XP_003494840.1| PREDICTED: ribosome-recycling factor-like [Bombus impatiens]
Length = 185
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/124 (45%), Positives = 90/124 (72%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+ I+KD + RME++++ + + +RTGR++P++LD I VEYYGS L+ +A + DS
Sbjct: 3 NEIQKDAEVRMEKSLESFQHHIAKIRTGRASPSLLDGISVEYYGSATPLRQVANVVAEDS 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
+L I +DKS ++ +EKAI++SDLG+ P + G VIR+ LP LT ERR++L+K+V +AE
Sbjct: 63 RTLAITVFDKSLIQVVEKAILTSDLGLNPASAGTVIRVPLPPLTEERRRDLTKIVRNEAE 122
Query: 214 EGKV 217
+G+V
Sbjct: 123 QGRV 126
>gi|384439930|ref|YP_005654654.1| Ribosome-recycling factor [Thermus sp. CCB_US3_UF1]
gi|359291063|gb|AEV16580.1| Ribosome-recycling factor [Thermus sp. CCB_US3_UF1]
Length = 185
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 86/121 (71%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+ ++ M+++++ + N +RTGR+NPA+L ++VEYYG+ V L IA ++ PD+ +L++
Sbjct: 9 ETRSHMQKSLEALEHNLAGLRTGRANPALLLHLKVEYYGTHVPLSQIATVSAPDARTLVV 68
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
Q +D+++LK+IEKAI SDLG+ P N G+ + + +P LT ERRKEL K AEEG++
Sbjct: 69 QSWDQNALKAIEKAIRDSDLGLNPANKGDALYINIPPLTEERRKELVKAARHMAEEGRIA 128
Query: 219 M 219
+
Sbjct: 129 I 129
>gi|312871359|ref|ZP_07731455.1| ribosome recycling factor [Lactobacillus iners LEAF 3008A-a]
gi|312872418|ref|ZP_07732487.1| ribosome recycling factor [Lactobacillus iners LEAF 2062A-h1]
gi|312873341|ref|ZP_07733394.1| ribosome recycling factor [Lactobacillus iners LEAF 2052A-d]
gi|311091131|gb|EFQ49522.1| ribosome recycling factor [Lactobacillus iners LEAF 2052A-d]
gi|311092000|gb|EFQ50375.1| ribosome recycling factor [Lactobacillus iners LEAF 2062A-h1]
gi|311093111|gb|EFQ51459.1| ribosome recycling factor [Lactobacillus iners LEAF 3008A-a]
Length = 185
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/124 (45%), Positives = 85/124 (68%), Gaps = 1/124 (0%)
Query: 96 IEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSS 155
IEK KA M ++I + +R G +N ++LD I+VEYYG P L ++ I P++
Sbjct: 6 IEK-AKANMSKSISVFEKELGGIRAGVANASLLDGIKVEYYGVPTPLTQMSSITIPEARV 64
Query: 156 LLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEG 215
L+I P+DK++L +IE AI++SDLG+TP NDG V+R+ +PQLT ERR E++K V K AE+
Sbjct: 65 LMITPFDKTTLNNIEHAILASDLGITPANDGSVVRIVIPQLTGERRIEIAKKVGKLAEQA 124
Query: 216 KVVM 219
K+ +
Sbjct: 125 KIAI 128
>gi|255524238|ref|ZP_05391197.1| ribosome recycling factor [Clostridium carboxidivorans P7]
gi|296185359|ref|ZP_06853769.1| ribosome recycling factor [Clostridium carboxidivorans P7]
gi|255512063|gb|EET88344.1| ribosome recycling factor [Clostridium carboxidivorans P7]
gi|296050193|gb|EFG89617.1| ribosome recycling factor [Clostridium carboxidivorans P7]
Length = 185
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 84/125 (67%)
Query: 95 SIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSS 154
I K +M +T++ ++ S++ GR+NPAMLDKIE EYYG+ + +A I+ P+
Sbjct: 4 DIMKKADEKMNKTVEALKRELASMKAGRANPAMLDKIEAEYYGTMTPINQLANISVPEPR 63
Query: 155 SLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEE 214
L IQP+DK S K+IEKAI+ SDLG+ P++DGE+IRL + +LT E RK + K + K E+
Sbjct: 64 VLAIQPWDKGSFKAIEKAILKSDLGINPSSDGEMIRLVIAELTEETRKNIVKNIKKDGED 123
Query: 215 GKVVM 219
KV +
Sbjct: 124 SKVAV 128
>gi|21230827|ref|NP_636744.1| ribosome recycling factor [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66769174|ref|YP_243936.1| ribosome recycling factor [Xanthomonas campestris pv. campestris
str. 8004]
gi|188992321|ref|YP_001904331.1| ribosome recycling factor [Xanthomonas campestris pv. campestris
str. B100]
gi|24418655|sp|Q8PAV6.1|RRF_XANCP RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|81304866|sp|Q4USQ7.1|RRF_XANC8 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|229890170|sp|B0RW69.1|RRF_XANCB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|21112430|gb|AAM40668.1| ribosome recycling factor [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66574506|gb|AAY49916.1| ribosome recycling factor [Xanthomonas campestris pv. campestris
str. 8004]
gi|167734081|emb|CAP52287.1| unnamed protein product [Xanthomonas campestris pv. campestris]
Length = 185
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/126 (47%), Positives = 87/126 (69%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+ I++D + RM ++ID +R + +VRTGR++PA+LD I+V+ YG+ L +A I+ +
Sbjct: 3 NQIKQDAQTRMTKSIDALRHSLTTVRTGRASPALLDNIKVKAYGTDTPLNQVASISVSEG 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
SL+I +DK +K +EKAI +SDLG+TP G VIRL LP LT ERRKELSK V + E
Sbjct: 63 RSLVISLFDKGMIKDVEKAIYASDLGLTPTVVGTVIRLNLPPLTEERRKELSKSVHGEGE 122
Query: 214 EGKVVM 219
+ KV +
Sbjct: 123 DAKVAI 128
>gi|386818055|ref|ZP_10105273.1| ribosome recycling factor [Thiothrix nivea DSM 5205]
gi|386422631|gb|EIJ36466.1| ribosome recycling factor [Thiothrix nivea DSM 5205]
Length = 185
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 89/125 (71%)
Query: 95 SIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSS 154
I++D + RM+++I+ ++ + +RTGR++P++LD++ V+YYGS V L +A I T D+
Sbjct: 4 DIKQDAEQRMQKSIEALKHDLAKIRTGRAHPSLLDQVTVDYYGSEVPLSQVANIGTEDAR 63
Query: 155 SLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEE 214
+L + P++K IEKAI++S+LG+ P NDG VIR+ LP LT ERR++L KVV +AE
Sbjct: 64 TLKVTPWEKPMASKIEKAILTSNLGLNPANDGNVIRVPLPALTEERRRDLVKVVKSEAEG 123
Query: 215 GKVVM 219
+V +
Sbjct: 124 ARVAI 128
>gi|429124558|ref|ZP_19185090.1| ribosome recycling factor [Brachyspira hampsonii 30446]
gi|426279569|gb|EKV56591.1| ribosome recycling factor [Brachyspira hampsonii 30446]
Length = 182
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 83/119 (69%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K RME+ + ++ + +RTGR+N ++LD ++VE YGS + LK + ++TPDS +++IQP
Sbjct: 7 KDRMEKAVSSLQNDLKGIRTGRANASILDGVKVEAYGSSMPLKQVGNVSTPDSRTIMIQP 66
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
+DK + IEKAI+ +DLG P NDG IR+ +P+LT ERR+EL K V + EE K+ +
Sbjct: 67 FDKGLVSDIEKAILKADLGFNPFNDGGNIRIVVPELTKERREELKKGVRHRGEEAKIAV 125
>gi|46198814|ref|YP_004481.1| ribosome recycling factor [Thermus thermophilus HB27]
gi|55980827|ref|YP_144124.1| ribosome recycling factor [Thermus thermophilus HB8]
gi|6831652|sp|Q9WX76.1|RRF_THET8 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|60390719|sp|Q72KE0.1|RRF_THET2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|11513707|pdb|1EH1|A Chain A, Ribosome Recycling Factor From Thermus Thermophilus
gi|157836509|pdb|2V46|Y Chain Y, Structure Of The Ribosome Recycling Factor Bound To The
Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And
Trna-Fmet (Part 1 Of 4). This File Contains The 30s
Subunit, Mrna, P-Site Asl, E-Site Trna And Rrf For
Molecule 1.
gi|157836565|pdb|2V48|Y Chain Y, Structure Of The Ribosome Recycling Factor Bound To The
Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And
Trna-Fmet (Part 3 Of 4). This File Contains The 30s
Subunit, Mrna, P-Site Asl, E-Site Trna And Rrf For
Molecule 2.
gi|158429965|pdb|2QBE|6 Chain 6, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Ribosome Recycling
Factor (Rrf). This File Contains The 50s Subunit Of The
First 70s Ribosome, With Rrf Bound. The Entire Crystal
Structure Contains Two 70s Ribosomes And Is Described In
Remark 400.
gi|158430018|pdb|2QBG|6 Chain 6, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Ribosome Recycling
Factor (Rrf). This File Contains The 50s Subunit Of The
Second 70s Ribosome, With Rrf Bound. The Entire Crystal
Structure Contains Two 70s Ribosomes And Is Described In
Remark 400.
gi|158430071|pdb|2QBI|6 Chain 6, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Gentamicin And Ribosome
Recycling Factor (Rrf). This File Contains The 50s
Subunit Of The First 70s Ribosome, With Gentamicin And
Rrf Bound. The Entire Crystal Structure Contains Two 70s
Ribosomes And Is Described In Remark 400.
gi|158430124|pdb|2QBK|6 Chain 6, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Gentamicin And Ribosome
Recycling Factor (Rrf). This File Contains The 50s
Subunit Of The Second 70s Ribosome, With Gentamicin And
Rrf Bound. The Entire Crystal Structure Contains Two 70s
Ribosomes And Is Described In Remark 400.
gi|158431424|pdb|2Z4L|6 Chain 6, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Paromomycin And
Ribosome Recycling Factor (Rrf). This File Contains The
50s Subunit Of The First 70s Ribosome, With Paromomycin
And Rrf Bound. The Entire Crystal Structure Contains Two
70s Ribosomes And Is Described In Remark 400.
gi|158431477|pdb|2Z4N|6 Chain 6, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Paromomycin And
Ribosome Recycling Factor (Rrf). This File Contains The
50s Subunit Of The Second 70s Ribosome, With Paromomycin
And Rrf Bound. The Entire Crystal Structure Contains Two
70s Ribosomes And Is Described In Remark 400.
gi|385251648|pdb|3J0D|J Chain J, Models For The T. Thermophilus Ribosome Recycling Factor
Bound To The E. Coli Post-Termination Complex
gi|385251656|pdb|3J0E|G Chain G, Models For The T. Thermophilus Ribosome Recycling Factor
And The E. Coli Elongation Factor G Bound To The E. Coli
Post-Termination Complex
gi|4589668|dbj|BAA76865.1| frr [Thermus thermophilus]
gi|46196437|gb|AAS80854.1| ribosome recycling factor (rrf) [Thermus thermophilus HB27]
gi|55772240|dbj|BAD70681.1| ribosome recycling factor (Rrf) [Thermus thermophilus HB8]
Length = 185
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 94/135 (69%), Gaps = 7/135 (5%)
Query: 85 TIEEIEAEKSSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKS 144
T++E+ AE ++ M+++++++ N +RTGR+NPA+L ++VEYYG+ V L
Sbjct: 2 TLKELYAE-------TRSHMQKSLEVLEHNLAGLRTGRANPALLLHLKVEYYGAHVPLNQ 54
Query: 145 IAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKEL 204
IA + PD +L++Q +D+++LK+IEKAI SDLG+ P+N G+ + + +P LT ERRK+L
Sbjct: 55 IATVTAPDPRTLVVQSWDQNALKAIEKAIRDSDLGLNPSNKGDALYINIPPLTEERRKDL 114
Query: 205 SKVVAKQAEEGKVVM 219
+ V + AEEG+V +
Sbjct: 115 VRAVRQYAEEGRVAI 129
>gi|320547289|ref|ZP_08041581.1| ribosome recycling factor [Streptococcus equinus ATCC 9812]
gi|320448093|gb|EFW88844.1| ribosome recycling factor [Streptococcus equinus ATCC 9812]
Length = 185
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/124 (50%), Positives = 82/124 (66%), Gaps = 1/124 (0%)
Query: 96 IEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSS 155
IEK K R E++ + F S+R GR+N ++LD+I+VEYYG+ L +A I P++
Sbjct: 6 IEK-AKERFEQSHSSLAREFASIRAGRANASLLDRIQVEYYGAMTPLNQLASITVPEARV 64
Query: 156 LLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEG 215
LLI P+DKSSLK IE AI +SDLG+ P NDG VIRL +P LT E RK L+K V K E
Sbjct: 65 LLISPFDKSSLKDIEHAINASDLGINPANDGSVIRLVIPALTEETRKALAKDVKKVGENA 124
Query: 216 KVVM 219
KV +
Sbjct: 125 KVAI 128
>gi|268590529|ref|ZP_06124750.1| ribosome recycling factor [Providencia rettgeri DSM 1131]
gi|291314115|gb|EFE54568.1| ribosome recycling factor [Providencia rettgeri DSM 1131]
Length = 185
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/124 (46%), Positives = 89/124 (71%)
Query: 96 IEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSS 155
I+KD + RME++++ ++ + VRTGR++P++LD I VEYYGS L+ +A + DS +
Sbjct: 5 IQKDAQDRMEKSLEAFKSQISKVRTGRASPSLLDGITVEYYGSATPLRQLANVTVEDSRT 64
Query: 156 LLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEG 215
L I +D+S +IEKAI++SDLG+ P++ G VIR+ LP LT ERRK+L KVV AE+G
Sbjct: 65 LAISVFDRSMSPAIEKAIMASDLGLNPSSAGTVIRVPLPPLTEERRKDLIKVVRGDAEQG 124
Query: 216 KVVM 219
++ +
Sbjct: 125 RIAV 128
>gi|300780937|ref|ZP_07090791.1| ribosome recycling factor [Corynebacterium genitalium ATCC 33030]
gi|300532644|gb|EFK53705.1| ribosome recycling factor [Corynebacterium genitalium ATCC 33030]
Length = 185
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 83/121 (68%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
D + RM +++ R ++RTGR+NPAM + + E+YG+P + +A I+ P+ LLI
Sbjct: 8 DAEERMTNSVEHTRGELVTIRTGRANPAMFNSVMAEFYGAPTPINQMATISVPEPRMLLI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVV 218
+PYD S++ IE AI +SDLG+ P +DG+VIR+T+PQLT ERR++L K + E+GK+
Sbjct: 68 KPYDPSTMGEIENAIRNSDLGVNPTDDGQVIRVTIPQLTEERRRDLVKQAKGKGEDGKIA 127
Query: 219 M 219
+
Sbjct: 128 I 128
>gi|415886602|ref|ZP_11548382.1| ribosome recycling factor [Bacillus methanolicus MGA3]
gi|387587289|gb|EIJ79612.1| ribosome recycling factor [Bacillus methanolicus MGA3]
Length = 185
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 82/119 (68%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K +M + I S+R GR++ ++LD++ V+YYG P + +A I+ P+ L+IQP
Sbjct: 10 KEKMTKAIQAYTREIASIRAGRASASLLDRVTVDYYGVPTPVNQLAGISVPEPRLLVIQP 69
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
YDKS + IEKAI+ SDLG+ P +DG +IR+ +PQLT ERRKEL KVV K++EE KV +
Sbjct: 70 YDKSIVGEIEKAILKSDLGLNPTSDGSLIRIAIPQLTEERRKELVKVVKKESEEAKVAI 128
>gi|307243333|ref|ZP_07525497.1| ribosome recycling factor [Peptostreptococcus stomatis DSM 17678]
gi|306493280|gb|EFM65269.1| ribosome recycling factor [Peptostreptococcus stomatis DSM 17678]
Length = 185
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/115 (49%), Positives = 81/115 (70%)
Query: 103 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYD 162
+ME+TI+ ++ F ++R GR+N +MLDK+ V+YYG+P + +A I + L I P+D
Sbjct: 12 QMEKTIEALKFEFGTIRAGRANASMLDKVRVDYYGTPTPVNQMAAIAVSEGRILTITPWD 71
Query: 163 KSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
KSS+ +IEKAI SD+G+ P NDG VIRL +P LT ERRKEL+K +K +E KV
Sbjct: 72 KSSIHTIEKAISESDVGIAPANDGSVIRLVVPPLTEERRKELAKKASKASESFKV 126
>gi|402313158|ref|ZP_10832079.1| ribosome recycling factor [Lachnospiraceae bacterium ICM7]
gi|400366918|gb|EJP19938.1| ribosome recycling factor [Lachnospiraceae bacterium ICM7]
Length = 184
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 83/122 (68%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K + +M ++ID++ + S+R GR+NP +LD+I+VEYYG+P ++ + I+ P+ +
Sbjct: 6 KKFEEKMTKSIDVLLEEYASIRAGRANPHVLDRIKVEYYGTPTPIQQVGNISVPEPRIIQ 65
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
I P++KS LK IEKAI SDLG+ P NDG IRL P+LT ERRKEL K V K+ E KV
Sbjct: 66 IAPWEKSLLKEIEKAINMSDLGINPTNDGSCIRLIFPELTEERRKELVKDVKKKGEACKV 125
Query: 218 VM 219
+
Sbjct: 126 AV 127
>gi|163839290|ref|YP_001623695.1| ribosome recycling factor [Renibacterium salmoninarum ATCC 33209]
gi|189044067|sp|A9WL12.1|RRF_RENSM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|162952766|gb|ABY22281.1| ribosome recycling factor [Renibacterium salmoninarum ATCC 33209]
Length = 185
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 88/119 (73%)
Query: 99 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLI 158
+ + +M++ +++ + +F++VRTGR+NP + K+ V+YYG+P L+ +A P++ +LLI
Sbjct: 8 EAEEKMDKAVEVAKEDFSAVRTGRANPGLFAKVMVDYYGAPTPLQQLASFAVPEARTLLI 67
Query: 159 QPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
P+D+S+L IEKA+ +S++G P+NDG VIR+ +P+LT ERR+E K+V ++E+ K+
Sbjct: 68 TPFDRSALGDIEKALSNSEVGANPSNDGNVIRVVMPELTQERRREYVKIVRGKSEDAKI 126
>gi|58581596|ref|YP_200612.1| ribosome recycling factor [Xanthomonas oryzae pv. oryzae KACC
10331]
gi|84623520|ref|YP_450892.1| ribosome recycling factor [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188577166|ref|YP_001914095.1| ribosome recycling factor [Xanthomonas oryzae pv. oryzae PXO99A]
gi|384419979|ref|YP_005629339.1| ribosome recycling factor [Xanthomonas oryzae pv. oryzicola BLS256]
gi|62900777|sp|Q5H1E4.1|RRF_XANOR RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|123522271|sp|Q2P4A9.1|RRF_XANOM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|238689544|sp|B2SR02.1|RRF_XANOP RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|58426190|gb|AAW75227.1| ribosome recycling factor [Xanthomonas oryzae pv. oryzae KACC
10331]
gi|84367460|dbj|BAE68618.1| ribosome recycling factor [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188521618|gb|ACD59563.1| ribosome recycling factor [Xanthomonas oryzae pv. oryzae PXO99A]
gi|353462892|gb|AEQ97171.1| ribosome recycling factor [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 185
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/126 (47%), Positives = 87/126 (69%)
Query: 94 SSIEKDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDS 153
+ I++D + RM ++ID +R + +VRTGR++PA+LD I+V+ YG+ L +A I+ +
Sbjct: 3 TQIKQDAQTRMTKSIDALRHSLTTVRTGRASPALLDGIKVKAYGTDTPLNQVASISVSEG 62
Query: 154 SSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAE 213
SL+I +DK +K +EKAI +SDLG+TP G VIRL LP LT ERRKELSK V + E
Sbjct: 63 RSLVISLFDKGMIKDVEKAIYASDLGLTPTVVGTVIRLNLPPLTEERRKELSKSVHGEGE 122
Query: 214 EGKVVM 219
+ KV +
Sbjct: 123 DSKVAI 128
>gi|384209174|ref|YP_005594894.1| ribosome recycling factor [Brachyspira intermedia PWS/A]
gi|343386824|gb|AEM22314.1| ribosome recycling factor [Brachyspira intermedia PWS/A]
Length = 182
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 83/119 (69%)
Query: 101 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 160
K RME+ + ++ + +RTGR+N ++LD ++VE YGS + LK + ++TPDS +++IQP
Sbjct: 7 KDRMEKAVSSLQNDLKGIRTGRANASILDGVKVEAYGSSMPLKQVGNVSTPDSRTIMIQP 66
Query: 161 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVVM 219
+DK + IEKAI+ +DLG P NDG IR+ +P+LT ERR+EL K V + EE K+ +
Sbjct: 67 FDKGLVSDIEKAILKADLGFNPFNDGGNIRIVVPELTKERREELKKGVRHRGEEAKIAV 125
>gi|404482326|ref|ZP_11017553.1| ribosome-recycling factor [Clostridiales bacterium OBRC5-5]
gi|404344487|gb|EJZ70844.1| ribosome-recycling factor [Clostridiales bacterium OBRC5-5]
Length = 184
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 83/122 (68%)
Query: 98 KDVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLL 157
K + +M ++ID++ + S+R GR+NP +LD+I+VEYYG+P ++ + I+ P+ +
Sbjct: 6 KKFEEKMTKSIDVLLEEYASIRAGRANPHVLDRIKVEYYGTPTPIQQVGNISVPEPRIIQ 65
Query: 158 IQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 217
I P++KS LK IEKAI SDLG+ P NDG IRL P+LT ERRKEL K V K+ E KV
Sbjct: 66 IAPWEKSLLKEIEKAINMSDLGINPTNDGSCIRLIFPELTEERRKELVKDVKKKGEACKV 125
Query: 218 VM 219
+
Sbjct: 126 AV 127
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.127 0.347
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,076,633,260
Number of Sequences: 23463169
Number of extensions: 105027495
Number of successful extensions: 341833
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3247
Number of HSP's successfully gapped in prelim test: 172
Number of HSP's that attempted gapping in prelim test: 338367
Number of HSP's gapped (non-prelim): 3454
length of query: 226
length of database: 8,064,228,071
effective HSP length: 137
effective length of query: 89
effective length of database: 9,144,741,214
effective search space: 813881968046
effective search space used: 813881968046
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 74 (33.1 bits)