Query 027216
Match_columns 226
No_of_seqs 80 out of 82
Neff 3.9
Searched_HMMs 29240
Date Mon Mar 25 10:39:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027216.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027216hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2y9f_A LSL-150, hemolytic lect 42.5 9 0.00031 31.6 1.4 15 69-83 82-96 (150)
2 4akr_A F-actin-capping protein 37.7 24 0.00082 31.4 3.5 48 77-144 162-209 (281)
3 3aa0_A F-actin-capping protein 20.9 55 0.0019 28.8 2.8 15 78-92 169-183 (286)
4 1zhs_A MVL, mannan-binding lec 15.1 32 0.0011 27.2 -0.2 12 75-86 89-100 (113)
5 4g0i_A Protein YQJG; glutathio 10.9 73 0.0025 28.5 0.9 9 75-83 6-14 (328)
6 4dny_A Metalloprotease STCE; m 10.9 76 0.0026 25.4 0.9 18 64-81 50-67 (126)
7 4fqu_A Putative glutathione tr 8.6 83 0.0028 28.0 0.3 9 75-83 6-14 (313)
8 2b0r_A Possible adenyl cyclase 6.9 1.6E+02 0.0054 25.3 1.2 58 79-151 49-107 (202)
9 3vmn_A Dextranase; TIM barrel, 6.3 5.6E+02 0.019 25.4 4.9 38 94-137 7-44 (643)
10 3e29_A Uncharacterized protein 5.7 7.5E+02 0.026 18.0 4.5 31 107-137 88-118 (144)
No 1
>2y9f_A LSL-150, hemolytic lectin LSLA; sugar binding protein; 1.47A {Laetiporus sulphureus} PDB: 2y9g_A*
Probab=42.52 E-value=9 Score=31.56 Aligned_cols=15 Identities=33% Similarity=0.720 Sum_probs=12.0
Q ss_pred EEEcCCCCccCCccc
Q 027216 69 ITVSPSDGRWHGNWN 83 (226)
Q Consensus 69 i~~~~~~g~~~~~w~ 83 (226)
+-....||||.|+|=
T Consensus 82 vG~~d~Dgky~dnwF 96 (150)
T 2y9f_A 82 VGQIDGDGRYPDNWF 96 (150)
T ss_dssp EEEESSSSCSGGGCB
T ss_pred cceeCCCCccccccE
Confidence 444679999999994
No 2
>4akr_A F-actin-capping protein subunit alpha; actin-binding protein; 2.20A {Dictyostelium discoideum}
Probab=37.73 E-value=24 Score=31.36 Aligned_cols=48 Identities=19% Similarity=0.336 Sum_probs=30.1
Q ss_pred ccCCccceeeeeeeccccccccccCCcccccCCCCCcceEEEEEEEEecCCeEEEEEEEEEEEeeecc
Q 027216 77 RWHGNWNSEYVVSLKQLRLADLIEDDDHLHQHKNKDAQVSINLSIQKHASFGFSVDGRIITSFSRKCS 144 (226)
Q Consensus 77 ~~~~~w~~~~~~sl~~L~l~dl~~d~~~~~~~~~k~aPV~V~l~V~k~~g~~l~VdG~I~tsv~~~Cs 144 (226)
=|+|.|.|+|.+++.. . .+.|.++|.|.-. -||+=+|.|+-.....+.
T Consensus 162 FwnGrWrS~w~~~~~~-----------~-------~~~l~~~G~I~V~--vHYyEDGNVqL~s~k~~~ 209 (281)
T 4akr_A 162 FYSGRWRSVWTCTFKP-----------G-------SGNVTSNGKVQVN--VHYFEDGNVQLNTVTQKQ 209 (281)
T ss_dssp TEEEEEEEEEEEEECT-----------T-------SSEEEEEEEEEEE--EEECSSEEEEEEEEEEEE
T ss_pred ccCCceEEEEEEEecC-----------C-------CCeEEECCEEEEE--EEEeecceEEEEeccccc
Confidence 4999999999887531 1 1234544666433 467777777666655543
No 3
>3aa0_A F-actin-capping protein subunit alpha-1; actin capping protein, barbed END regulation, carmil family conformational change; 1.70A {Gallus gallus} PDB: 2kz7_A 1izn_A 3aa1_A* 3aa6_A 3aa7_A* 3aaa_A 3aae_A 3lk2_A 3lk3_A 3lk4_A 2kxp_A
Probab=20.95 E-value=55 Score=28.81 Aligned_cols=15 Identities=33% Similarity=1.094 Sum_probs=12.8
Q ss_pred cCCccceeeeeeecc
Q 027216 78 WHGNWNSEYVVSLKQ 92 (226)
Q Consensus 78 ~~~~w~~~~~~sl~~ 92 (226)
|+|.|.|.|++++..
T Consensus 169 w~G~W~Si~~~~v~~ 183 (286)
T 3aa0_A 169 WNGRWRSEWKFTITP 183 (286)
T ss_dssp EEEEEEEEEEEEEET
T ss_pred cCceeeeEEEEEecc
Confidence 999999999887654
No 4
>1zhs_A MVL, mannan-binding lectin; HIV-1, carbohydrate binding, sugar binding protein; HET: NAG BMA MAN; 1.80A {Microcystis viridis} PDB: 1zhq_A*
Probab=15.10 E-value=32 Score=27.25 Aligned_cols=12 Identities=17% Similarity=0.662 Sum_probs=9.3
Q ss_pred CCccCCccceee
Q 027216 75 DGRWHGNWNSEY 86 (226)
Q Consensus 75 ~g~~~~~w~~~~ 86 (226)
.|+|+|||.+.+
T Consensus 89 gg~W~GQW~t~v 100 (113)
T 1zhs_A 89 GAEFTGQWRTIV 100 (113)
T ss_dssp TSEEEEEEEEEE
T ss_pred cCcccceeeEec
Confidence 467999998754
No 5
>4g0i_A Protein YQJG; glutathionyl-hydroquinone reductase, oxidoreductase; HET: MES; 2.05A {Escherichia coli} PDB: 3r3e_A* 4g0k_A* 4g0l_A*
Probab=10.93 E-value=73 Score=28.50 Aligned_cols=9 Identities=56% Similarity=1.586 Sum_probs=8.2
Q ss_pred CCccCCccc
Q 027216 75 DGRWHGNWN 83 (226)
Q Consensus 75 ~g~~~~~w~ 83 (226)
||+|+++|.
T Consensus 6 ~g~w~~~w~ 14 (328)
T 4g0i_A 6 DGVWHDTWY 14 (328)
T ss_dssp SSCBCSSCT
T ss_pred CcEeeeecc
Confidence 799999995
No 6
>4dny_A Metalloprotease STCE; metzincin, bacterial zinc metalloprotease, O-linked glycoPro hydrolase; 1.61A {Escherichia coli}
Probab=10.88 E-value=76 Score=25.37 Aligned_cols=18 Identities=22% Similarity=0.687 Sum_probs=14.0
Q ss_pred CCCceEEEcCCCCccCCc
Q 027216 64 IPRPLITVSPSDGRWHGN 81 (226)
Q Consensus 64 ~~~~li~~~~~~g~~~~~ 81 (226)
...-+|.|.++||.|..+
T Consensus 50 ~~~d~V~v~t~DG~W~rd 67 (126)
T 4dny_A 50 TNNALVEIHTANGRWVRD 67 (126)
T ss_dssp TSCSEEEEEEETTBCCSE
T ss_pred ccCCEEEEEecCCceEcc
Confidence 345799999999997653
No 7
>4fqu_A Putative glutathione transferase; glutathionyl-hydroquinone reductases, oxidoredu; 3.00A {Sphingobium chlorophenolicum}
Probab=8.59 E-value=83 Score=28.03 Aligned_cols=9 Identities=44% Similarity=1.358 Sum_probs=8.1
Q ss_pred CCccCCccc
Q 027216 75 DGRWHGNWN 83 (226)
Q Consensus 75 ~g~~~~~w~ 83 (226)
||+|+++|.
T Consensus 6 ~g~w~~~w~ 14 (313)
T 4fqu_A 6 DGVWRDAWY 14 (313)
T ss_dssp SSSEECSCS
T ss_pred cceeccccc
Confidence 799999995
No 8
>2b0r_A Possible adenyl cyclase-associated protein; structural genomics consortium, SGC, unknown function; 2.60A {Cryptosporidium parvum}
Probab=6.91 E-value=1.6e+02 Score=25.31 Aligned_cols=58 Identities=17% Similarity=0.243 Sum_probs=34.5
Q ss_pred CCccceeeeee-eccccccccccCCcccccCCCCCcceEEEEEEEEecCCeEEEEEEEEEEEeeeccccccccc
Q 027216 79 HGNWNSEYVVS-LKQLRLADLIEDDDHLHQHKNKDAQVSINLSIQKHASFGFSVDGRIITSFSRKCSYCSSPYC 151 (226)
Q Consensus 79 ~~~w~~~~~~s-l~~L~l~dl~~d~~~~~~~~~k~aPV~V~l~V~k~~g~~l~VdG~I~tsv~~~CsRCLkpF~ 151 (226)
+.+|.=||+.. =.+|-++ +.++ .-.|.|-.+- +-.+.|+|.+++-.-..|.||.--|.
T Consensus 49 G~KW~VEn~~~~~~~lvi~----~~e~-------~qsV~I~~C~----nstI~IkGKvNsItld~C~k~~vv~d 107 (202)
T 2b0r_A 49 KDTYLVENHVNCADPITLS----EGSI-------KNKVSVRCSQ----NSRIIVEQKVNSIFIENCVGCIFLVN 107 (202)
T ss_dssp TTEEEEECCBSCSSCEEEC----CCCT-------TCEEEEEEEE----SCEEEECSCBSEEEEEEEEEEEEEEC
T ss_pred CCEEEEEeccCCCCCceEe----cccc-------CcEEEEEecc----ceEEEEcCcEEEEEEecCCcEEEEEe
Confidence 34799999887 5555333 3333 2334443322 33677888887777777777764443
No 9
>3vmn_A Dextranase; TIM barrel, immunoglobrin fold, greek-KEY-motif, glycoside H family 66, hydrolase; 1.60A {Streptococcus mutans} PDB: 3vmo_A* 3vmp_A*
Probab=6.28 E-value=5.6e+02 Score=25.39 Aligned_cols=38 Identities=16% Similarity=0.243 Sum_probs=27.3
Q ss_pred cccccccCCcccccCCCCCcceEEEEEEEEecCCeEEEEEEEEE
Q 027216 94 RLADLIEDDDHLHQHKNKDAQVSINLSIQKHASFGFSVDGRIIT 137 (226)
Q Consensus 94 ~l~dl~~d~~~~~~~~~k~aPV~V~l~V~k~~g~~l~VdG~I~t 137 (226)
.+.|+..|+++ -....+|.+.+++.++++... .|+|+.
T Consensus 7 ~i~~v~tDKA~----Y~PGe~V~l~~~l~n~t~~~~--~gtv~~ 44 (643)
T 3vmn_A 7 NMINLTTDKAV----YQAGEAVHLNLTLNNTTSLAQ--NITATA 44 (643)
T ss_dssp CSCCCEESCSS----BCTTSCEEEECEEECCSSSCE--EEEEEE
T ss_pred cceeeeccccc----cCCCCeEEEEEEEecccCccc--eeEEEE
Confidence 57888999988 344588999999999766655 444444
No 10
>3e29_A Uncharacterized protein Q7WE92_borbr; Q7WE92 NESG, structural genomics, PSI-2, Pro structure initiative; 2.40A {Bordetella bronchiseptica} SCOP: d.38.1.0
Probab=5.74 E-value=7.5e+02 Score=18.04 Aligned_cols=31 Identities=3% Similarity=0.033 Sum_probs=22.7
Q ss_pred cCCCCCcceEEEEEEEEecCCeEEEEEEEEE
Q 027216 107 QHKNKDAQVSINLSIQKHASFGFSVDGRIIT 137 (226)
Q Consensus 107 ~~~~k~aPV~V~l~V~k~~g~~l~VdG~I~t 137 (226)
..|.+.++|.+...|.+.+.....+++.|..
T Consensus 88 l~p~~~g~l~~~a~v~~~gr~~~~~~~~i~~ 118 (144)
T 3e29_A 88 HRVATPGDLRAEGQVIHFGKRFATAHARVLD 118 (144)
T ss_dssp CSCCCSSCEEEEEEEEEECSSEEEEEEEEEE
T ss_pred ecCCCCcEEEEEEEEEEeCCcEEEEEEEEEe
Confidence 3455556799999999996667777777754
Done!