Query 027216
Match_columns 226
No_of_seqs 80 out of 82
Neff 3.9
Searched_HMMs 13730
Date Mon Mar 25 10:39:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027216.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/027216hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1x3ha2 g.39.1.3 (A:43-74) Leu 28.6 8.2 0.0006 22.8 0.8 10 142-151 1-10 (32)
2 d1u5sb2 g.39.1.3 (B:103-137) P 24.3 11 0.00078 22.7 0.7 12 141-152 1-12 (35)
3 d1izna_ e.43.1.1 (A:) Capz alp 23.8 25 0.0018 29.0 3.3 15 76-90 161-175 (275)
4 d1gjwa1 b.71.1.1 (A:573-636) M 13.9 33 0.0024 22.6 1.4 36 56-95 24-59 (64)
5 d1x6ha1 g.37.1.1 (A:44-80) Tra 11.2 36 0.0026 20.3 0.8 14 140-153 4-17 (37)
6 d1jhda2 c.26.1.5 (A:174-396) A 11.1 24 0.0018 26.6 -0.0 10 16-25 25-34 (223)
7 d1k4ma_ c.26.1.3 (A:) Nicotina 11.0 32 0.0023 24.0 0.6 25 184-208 169-194 (213)
8 d1v6ga2 g.39.1.3 (A:42-81) Act 10.6 49 0.0036 20.1 1.3 18 141-158 1-18 (40)
9 d1kala_ g.3.3.1 (A:) Kalata B1 10.5 40 0.0029 19.0 0.8 11 209-219 10-20 (29)
10 d1ea9c2 b.71.1.1 (C:504-583) M 10.5 1E+02 0.0074 19.7 3.1 51 30-83 1-52 (80)
No 1
>d1x3ha2 g.39.1.3 (A:43-74) Leupaxin {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.63 E-value=8.2 Score=22.83 Aligned_cols=10 Identities=20% Similarity=0.773 Sum_probs=9.0
Q ss_pred eccccccccc
Q 027216 142 KCSYCSSPYC 151 (226)
Q Consensus 142 ~CsRCLkpF~ 151 (226)
+|..|.+||.
T Consensus 1 VC~~C~~PF~ 10 (32)
T d1x3ha2 1 VCGDCFTSFS 10 (32)
T ss_dssp BCSSSCCBSC
T ss_pred CcCccCCcCC
Confidence 6999999996
No 2
>d1u5sb2 g.39.1.3 (B:103-137) Pinch (particularly interesting new Cys-His) protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.32 E-value=11 Score=22.68 Aligned_cols=12 Identities=25% Similarity=0.764 Sum_probs=9.8
Q ss_pred eecccccccccc
Q 027216 141 RKCSYCSSPYCK 152 (226)
Q Consensus 141 ~~CsRCLkpF~~ 152 (226)
.+|.+|-+||--
T Consensus 1 FvCA~CekPF~G 12 (35)
T d1u5sb2 1 FVCAKCEKPFLG 12 (35)
T ss_dssp CBCTTTCCBCSS
T ss_pred CcccccCCccCC
Confidence 479999999953
No 3
>d1izna_ e.43.1.1 (A:) Capz alpha-1 subunit {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=23.85 E-value=25 Score=29.00 Aligned_cols=15 Identities=33% Similarity=1.035 Sum_probs=12.6
Q ss_pred CccCCccceeeeeee
Q 027216 76 GRWHGNWNSEYVVSL 90 (226)
Q Consensus 76 g~~~~~w~~~~~~sl 90 (226)
-=|+|.|.|+|.+++
T Consensus 161 NFwnG~WrS~w~~~~ 175 (275)
T d1izna_ 161 NFWNGRWRSEWKFTI 175 (275)
T ss_dssp GTEEEEEEEEEEEEC
T ss_pred cccCceeEEEEEEEc
Confidence 458999999998775
No 4
>d1gjwa1 b.71.1.1 (A:573-636) Maltosyltransferase {Thermotoga maritima [TaxId: 2336]}
Probab=13.94 E-value=33 Score=22.62 Aligned_cols=36 Identities=33% Similarity=0.607 Sum_probs=22.8
Q ss_pred cccccCCCCCCceEEEcCCCCccCCccceeeeeeeccccc
Q 027216 56 QIVKKSSKIPRPLITVSPSDGRWHGNWNSEYVVSLKQLRL 95 (226)
Q Consensus 56 ~~~~~~~~~~~~li~~~~~~g~~~~~w~~~~~~sl~~L~l 95 (226)
+|+.+--+-|+-+ |=+ --|+|.|+.+-.+-|+-|..
T Consensus 24 viaanvgke~kei-tgg---rvw~gkw~d~ekvvlkp~ef 59 (64)
T d1gjwa1 24 VIAANVGKEPKEI-TGG---RVWNGKWSDEEKVVLKPLEF 59 (64)
T ss_dssp EEEEECSSSCEEE-EEE---EEESSSEEEEEEEEECTTCE
T ss_pred EEEeccCCCcccc-cCc---eeecCcccccceEEecceeE
Confidence 4455555555543 222 24999999998888876643
No 5
>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}
Probab=11.20 E-value=36 Score=20.31 Aligned_cols=14 Identities=21% Similarity=0.712 Sum_probs=11.4
Q ss_pred eeeccccccccccc
Q 027216 140 SRKCSYCSSPYCKK 153 (226)
Q Consensus 140 ~~~CsRCLkpF~~~ 153 (226)
.++|+.|-|.|...
T Consensus 4 afvcskcgktftrr 17 (37)
T d1x6ha1 4 AFVCSKCGKTFTRR 17 (37)
T ss_dssp CEECSSSCCEESCH
T ss_pred eeeecccccchhcc
Confidence 46899999998754
No 6
>d1jhda2 c.26.1.5 (A:174-396) ATP sulfurylase catalytic domain {Sulfur-oxidizing endosymbiont of Riftia pachyptila [TaxId: 35843]}
Probab=11.08 E-value=24 Score=26.61 Aligned_cols=10 Identities=30% Similarity=0.115 Sum_probs=8.3
Q ss_pred cCCCCCceee
Q 027216 16 FSTCNLPISI 25 (226)
Q Consensus 16 ~~~~~~~~~~ 25 (226)
|.||||+|..
T Consensus 25 f~TfnP~H~G 34 (223)
T d1jhda2 25 FQTRNPMHRA 34 (223)
T ss_dssp EEESSCCCHH
T ss_pred eeCCCCCCHH
Confidence 7789999964
No 7
>d1k4ma_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Escherichia coli [TaxId: 562]}
Probab=11.02 E-value=32 Score=23.99 Aligned_cols=25 Identities=8% Similarity=0.289 Sum_probs=14.5
Q ss_pred EEecCCceeeCc-HHHHHHhhhhCCc
Q 027216 184 IYVKPGYQADLD-SLVQDTIRLTTAV 208 (226)
Q Consensus 184 iy~~eGDeIDLd-elI~EqIiLalPm 208 (226)
++..+...+||+ ..||+.|.---+.
T Consensus 169 ~~~~~~~~~~ISST~IR~~i~~g~~i 194 (213)
T d1k4ma_ 169 IYLAETPWFNISATIIRERLQNGESC 194 (213)
T ss_dssp EEEECCCCCCCCHHHHHHHHHTTCCC
T ss_pred EEEecCCcCCCCHHHHHHHHHcCCCh
Confidence 333555566666 5777777654333
No 8
>d1v6ga2 g.39.1.3 (A:42-81) Actin-binding LIM protein 2, abLIM2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=10.64 E-value=49 Score=20.14 Aligned_cols=18 Identities=28% Similarity=0.539 Sum_probs=12.8
Q ss_pred eecccccccccccccccE
Q 027216 141 RKCSYCSSPYCKKIDTTF 158 (226)
Q Consensus 141 ~~CsRCLkpF~~~Id~~F 158 (226)
.+|++|-.||.--=..+|
T Consensus 1 FvC~vCr~pFP~GDRVTF 18 (40)
T d1v6ga2 1 FVCAVCRLPFPPGDRVTF 18 (40)
T ss_dssp SSCSSSCCCCCSSSCEEE
T ss_pred CcccccCCCCCCCCeEEE
Confidence 479999999976544444
No 9
>d1kala_ g.3.3.1 (A:) Kalata B1 {African plant (Oldenlandia affinis) [TaxId: 60225]}
Probab=10.54 E-value=40 Score=19.00 Aligned_cols=11 Identities=0% Similarity=-0.133 Sum_probs=9.0
Q ss_pred cccCccCCccc
Q 027216 209 KVLNIKSLLSA 219 (226)
Q Consensus 209 K~LCsEDCKG~ 219 (226)
-++|.|.|-|.
T Consensus 10 lpicgetcvgg 20 (29)
T d1kala_ 10 LPVCGETCVGG 20 (29)
T ss_dssp EECSSCCCTTS
T ss_pred ccccccccccc
Confidence 47899999875
No 10
>d1ea9c2 b.71.1.1 (C:504-583) Maltogenic amylase {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]}
Probab=10.52 E-value=1e+02 Score=19.66 Aligned_cols=51 Identities=20% Similarity=0.369 Sum_probs=30.8
Q ss_pred cccccCCC-CcceeeecccccCCCCCCcccccCCCCCCceEEEcCCCCccCCccc
Q 027216 30 SFKLVPHH-NSKIYAASFKKNIDSSQPQIVKKSSKIPRPLITVSPSDGRWHGNWN 83 (226)
Q Consensus 30 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~~w~ 83 (226)
+|+++.-+ +.+++|-.++.. ...-++.-|.|..+. -|++...+|.|.+-|+
T Consensus 1 sf~~L~a~~d~~v~ay~R~~~--~e~vlVv~N~S~~~~-tv~lp~~~~~~~~l~~ 52 (80)
T d1ea9c2 1 TFKFLTAEKNSRQIAYLREDD--QDTILVVMNNDKAGH-TLTLPVRHAQWTHLWQ 52 (80)
T ss_dssp CCCCSBCCSSCCEEEEEEECS--SCEEEEEEECSSSCE-EEEEECCSSSCCEEBS
T ss_pred CeEEEecCCCCCEEEEEEecC--CCEEEEEEECCCCCE-EEEecCCCCeEEEeec
Confidence 47777665 456777655542 356677777776654 4566655566654443
Done!