BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027220
(226 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LVU1|VAP21_ARATH Vesicle-associated protein 2-1 OS=Arabidopsis thaliana GN=PVA21
PE=2 SV=1
Length = 220
Score = 306 bits (784), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 147/219 (67%), Positives = 175/219 (79%), Gaps = 1/219 (0%)
Query: 1 MTADGGNQLISVHPEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTG 60
MT G NQLIS+ P+ELKF+FELEKQ +CDLKV N TE++VAFKVKTTSPKKYFVRPNTG
Sbjct: 1 MTGVGENQLISIQPDELKFLFELEKQSYCDLKVANKTENYVAFKVKTTSPKKYFVRPNTG 60
Query: 61 VVQPWDSCIIRVTLQAQRESPPDMQCKDKFLLQSTIVPSNTDVDDLPPDTFNKDSGKTIE 120
V+QPWDSCIIRVTLQAQRE PPDMQCKDKFLLQSTIVP +TDVD+LP DTF KDSGKT+
Sbjct: 61 VIQPWDSCIIRVTLQAQREYPPDMQCKDKFLLQSTIVPPHTDVDELPQDTFTKDSGKTLT 120
Query: 121 ECKLRVVYVSPSSAQGNLEDEGLVSATRSPDANSALQRLKDERDAAVRQTQLLQQDLDML 180
ECKL+V Y++PS+ Q + E +S + S +QRLK+ERDAAV+QTQ LQ +L+ +
Sbjct: 121 ECKLKVSYITPSTTQRSSESGATNGDGQSSETISTIQRLKEERDAAVKQTQQLQHELETV 180
Query: 181 -KRRGQRKGVRGFSLMFAAFVGLIGIMVGLILNLLLSSP 218
+RR QR G SL AA VGLIG+++G IL L L+SP
Sbjct: 181 RRRRNQRNSGNGLSLKLAAMVGLIGLIIGFILKLTLASP 219
>sp|Q84WW5|VAP13_ARATH Vesicle-associated protein 1-3 OS=Arabidopsis thaliana GN=PVA13
PE=2 SV=1
Length = 239
Score = 168 bits (426), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 101/232 (43%), Positives = 147/232 (63%), Gaps = 28/232 (12%)
Query: 9 LISVHPEELKFIFELEKQGFCDLKVINNTEHH-VAFKVKTTSPKKYFVRPNTGVVQPWDS 67
L+++HP ELKF FEL+KQ C +++ N T VAFKVKTT+P+KY VRPNTGVV P DS
Sbjct: 6 LVNIHPTELKFPFELKKQSSCSMQLTNKTTTQCVAFKVKTTNPRKYCVRPNTGVVLPGDS 65
Query: 68 CIIRVTLQAQRESPPDMQCKDKFLLQSTIVPSNTDVDDLPPDTFNKDSGKTIEECKLRVV 127
C + VT+QAQ+E+P DMQCKDKFL+Q+ +V T ++ + FNK++G+ IE+ KLRVV
Sbjct: 66 CNVTVTMQAQKEAPLDMQCKDKFLVQTVVVSDGTTSKEVLAEMFNKEAGRVIEDFKLRVV 125
Query: 128 YV-----SP---SSAQGN-----LEDEGLVSAT--------------RSPDANSALQRLK 160
Y+ SP S +GN L D SA+ +S +A S + +L
Sbjct: 126 YIPANPPSPVPEGSEEGNSPMASLNDIASQSASLFDDVSRTFEETSEKSSEAWSMISKLT 185
Query: 161 DERDAAVRQTQLLQQDLDMLKRRGQRKGVRGFSLMFAAFVGLIGIMVGLILN 212
+E+ +A +Q+Q L+ +L+ML++ +K G SL+ VGL+G ++G +LN
Sbjct: 186 EEKTSATQQSQKLRLELEMLRKETSKKQSGGHSLLLMLLVGLLGCVIGYLLN 237
>sp|Q9SHC8|VAP12_ARATH Vesicle-associated protein 1-2 OS=Arabidopsis thaliana GN=PVA12
PE=1 SV=1
Length = 239
Score = 161 bits (407), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 89/220 (40%), Positives = 131/220 (59%), Gaps = 29/220 (13%)
Query: 6 GNQLISVHPEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPW 65
N+L+++ P +L+F FEL+KQ C L + N T+++VAFKVKTT+PKKY VRPNTGVV P
Sbjct: 2 SNELLTIDPVDLQFPFELKKQISCSLYLGNKTDNYVAFKVKTTNPKKYCVRPNTGVVHPR 61
Query: 66 DSCIIRVTLQAQRESPPDMQCKDKFLLQSTIVPSNTDVDDLPPDTFNKDSGKTIEECKLR 125
S + VT+QAQ+E+P D+QCKDKFLLQ + D+ + F+K++G +EE KLR
Sbjct: 62 SSSEVLVTMQAQKEAPADLQCKDKFLLQCVVASPGATPKDVTHEMFSKEAGHRVEETKLR 121
Query: 126 VVYVSP--------------SSAQGNLEDEG----LVSATR-----------SPDANSAL 156
VVYV+P SS + ++ D G +A R S +A + +
Sbjct: 122 VVYVAPPRPPSPVREGSEEGSSPRASVSDNGNASDFTAAPRFSADRVDAQDNSSEARALV 181
Query: 157 QRLKDERDAAVRQTQLLQQDLDMLKRRGQRKGVRGFSLMF 196
+L +E+++AV+ LQQ+LD L+R +R G M+
Sbjct: 182 TKLTEEKNSAVQLNNRLQQELDQLRRESKRSKSGGIPFMY 221
>sp|Q8VZ95|VAP11_ARATH Vesicle-associated protein 1-1 OS=Arabidopsis thaliana GN=PVA11
PE=1 SV=1
Length = 256
Score = 159 bits (403), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 85/219 (38%), Positives = 129/219 (58%), Gaps = 29/219 (13%)
Query: 7 NQLISVHPEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWD 66
++L++V P +L+F FEL+KQ C L + N T+++VAFKVKTT+PKKY VRPNTGVV P
Sbjct: 20 SELLTVEPLDLQFPFELKKQISCSLYLTNKTDNNVAFKVKTTNPKKYCVRPNTGVVLPRS 79
Query: 67 SCIIRVTLQAQRESPPDMQCKDKFLLQSTIVPSNTDVDDLPPDTFNKDSGKTIEECKLRV 126
+C + VT+QAQ+E+P DMQCKDKFLLQ I ++ P+ F+K++G +EE KLRV
Sbjct: 80 TCEVLVTMQAQKEAPSDMQCKDKFLLQGVIASPGVTAKEVTPEMFSKEAGHRVEETKLRV 139
Query: 127 VYVSP--------------SSAQGNLEDEGLVSA---------------TRSPDANSALQ 157
YV+P SS + ++ D G S + +A + +
Sbjct: 140 TYVAPPRPPSPVHEGSEEGSSPRASVSDNGHGSEFSFERFIVDNKAGHQENTSEARALIT 199
Query: 158 RLKDERDAAVRQTQLLQQDLDMLKRRGQRKGVRGFSLMF 196
+L +E+ +A++ LQ++LD L+R ++ G M+
Sbjct: 200 KLTEEKQSAIQLNNRLQRELDQLRRESKKSQSGGIPFMY 238
>sp|B9DHD7|VAP22_ARATH Vesicle-associated protein 2-2 OS=Arabidopsis thaliana GN=PVA22
PE=1 SV=1
Length = 386
Score = 136 bits (342), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 85/126 (67%)
Query: 9 LISVHPEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSC 68
L+ + P L+F +L+KQ C +++ N T H+VAFKVKTTSPKKY VRPN GVV P +C
Sbjct: 5 LLDIQPRTLQFAVDLKKQTSCVVQLTNTTHHYVAFKVKTTSPKKYCVRPNVGVVAPKSTC 64
Query: 69 IIRVTLQAQRESPPDMQCKDKFLLQSTIVPSNTDVDDLPPDTFNKDSGKTIEECKLRVVY 128
V +QA +E PPDM CKDKFL+QST V + T +D+ F+K GK IEE KLRV
Sbjct: 65 EFTVIMQAFKEPPPDMVCKDKFLIQSTAVSAETTDEDITASMFSKAEGKHIEENKLRVTL 124
Query: 129 VSPSSA 134
V PS +
Sbjct: 125 VPPSDS 130
>sp|Q9SYC9|VAP14_ARATH Vesicle-associated protein 1-4 OS=Arabidopsis thaliana GN=PVA14
PE=2 SV=1
Length = 571
Score = 124 bits (312), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 96/154 (62%), Gaps = 4/154 (2%)
Query: 6 GNQLISVHPEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPW 65
++L+ + P +++F EL K+ C L + N TE++VAFK KTT+ KKY+VRPN GVV P
Sbjct: 173 SDELLIIDPVDVQFPIELNKKVSCSLNLTNKTENYVAFKAKTTNAKKYYVRPNVGVVLPR 232
Query: 66 DSCIIRVTLQAQRESPPDMQCKDKFLLQSTIVPSNTDVDDLPPDTFNKDSGKTIEECKLR 125
SC + V +QA +E+P DMQC+DK L Q +V T D+ + F+K++G EE +L+
Sbjct: 233 SSCEVLVIMQALKEAPADMQCRDKLLFQCKVVEPETTAKDVTSEMFSKEAGHPAEETRLK 292
Query: 126 VVYVS----PSSAQGNLEDEGLVSATRSPDANSA 155
V+YV+ PS Q E+ A+ S + N++
Sbjct: 293 VMYVTPPQPPSPVQEGTEEGSSPRASVSDNGNAS 326
Score = 117 bits (292), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 93/153 (60%), Gaps = 4/153 (2%)
Query: 7 NQLISVHPEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWD 66
++L++ +++F EL KQG C L + N T+++VAFK +TT PK Y V+P+ GVV P
Sbjct: 4 DELLTFDHVDIRFPIELNKQGSCSLNLTNKTDNYVAFKAQTTKPKMYCVKPSVGVVLPRS 63
Query: 67 SCIIRVTLQAQRESPPDMQCKDKFLLQSTIVPSNTDVDDLPPDTFNKDSGKTIEECKLRV 126
SC + V +QA +E+P D QCKDK L Q +V T ++ + F+K++G +EE ++
Sbjct: 64 SCEVLVVMQALKEAPADRQCKDKLLFQCKVVEPGTMDKEVTSEMFSKEAGHRVEETIFKI 123
Query: 127 VYVSP----SSAQGNLEDEGLVSATRSPDANSA 155
+YV+P S Q LED SA+ S N++
Sbjct: 124 IYVAPPQPQSPVQEGLEDGSSPSASVSDKGNAS 156
>sp|O82213|VAP31_ARATH Vesicle-associated protein 3-1 OS=Arabidopsis thaliana GN=PVA31
PE=3 SV=1
Length = 149
Score = 119 bits (298), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 84/130 (64%)
Query: 5 GGNQLISVHPEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQP 64
N+L+ + P L+F FEL+KQ C L + N T+++VAFKVKTT+ Y VRPN G++ P
Sbjct: 2 SNNELLEIEPMYLQFPFELKKQMSCSLYLTNKTDNNVAFKVKTTNRNNYCVRPNYGLILP 61
Query: 65 WDSCIIRVTLQAQRESPPDMQCKDKFLLQSTIVPSNTDVDDLPPDTFNKDSGKTIEECKL 124
+C + VT+QAQ+E P DMQ +KF++QS + ++ + F+K+SG +EE KL
Sbjct: 62 KSTCKVLVTMQAQKEVPSDMQSFEKFMIQSVLASPGVTAKEVTREMFSKESGHVVEETKL 121
Query: 125 RVVYVSPSSA 134
RV YV ++
Sbjct: 122 RVTYVCSTTT 131
>sp|O60119|YH75_SCHPO Vesicle-associated membrane protein-associated protein C16G5.05c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC16G5.05c PE=1 SV=1
Length = 383
Score = 73.2 bits (178), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 69/120 (57%), Gaps = 13/120 (10%)
Query: 31 LKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVTLQAQRESP-PDMQCKDK 89
+ V N V FKVKTT+PK Y VRPN+G ++P + ++V LQA +E P PD +C+DK
Sbjct: 23 ISVHNPNPEPVIFKVKTTAPKHYCVRPNSGKIEPKSTVNVQVLLQAMKEEPAPDFKCRDK 82
Query: 90 FLLQSTIVPSNTDVDDLPPDTFN------KDSGKTIEECKLRVVYVS---PSSAQGNLED 140
FL+QS + D D + ++ + G++I + K+R VY + P SA +E+
Sbjct: 83 FLIQSMAI---GDADTSNVENYHEFWTEMEKQGRSIFDRKIRCVYSTKQPPQSADKQVEN 139
>sp|Q10484|YDFC_SCHPO Uncharacterized protein C17C9.12 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC17C9.12 PE=1 SV=2
Length = 319
Score = 70.9 bits (172), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 63/111 (56%), Gaps = 3/111 (2%)
Query: 29 CDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVTLQAQRESP-PDMQCK 87
CDL++ N + + FKVKTT+PK+Y VRPN G ++ + + V LQ P P +C+
Sbjct: 21 CDLELRNTAPYPIGFKVKTTAPKQYCVRPNGGRIEANSAVSVEVILQPLDHEPAPGTKCR 80
Query: 88 DKFLLQSTIVPSNTDVDDLPPDTFNKDSGKTIEECKLRVVYV-SPSSAQGN 137
DKFL+QST + D+ D + + S I E K+R VY PS+A +
Sbjct: 81 DKFLVQSTELKPELQGMDI-ADIWTQVSKANISERKIRCVYSEGPSTANAH 130
>sp|A2VDZ9|VAPB_BOVIN Vesicle-associated membrane protein-associated protein B OS=Bos
taurus GN=VAPB PE=2 SV=1
Length = 243
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 98/188 (52%), Gaps = 13/188 (6%)
Query: 8 QLISVHPE-ELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWD 66
Q++S+ P+ ELKF +LK+ N T+ +V FKVKTT+P++Y VRPN+G++
Sbjct: 6 QVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGA 65
Query: 67 SCIIRVTLQAQRESPPDMQCKDKFLLQSTIVPSNTDVDDLPPDTFNKDSGKTIEECKLRV 126
S + V LQ + P+ + K KF++QS P TD D+ + + + + + KLR
Sbjct: 66 SINVSVMLQP-FDYDPNEKSKHKFMVQSMFAP--TDTSDMEA-VWKEAKPEDLMDSKLRC 121
Query: 127 VYVSPSSAQG--NLEDEGLV----SATRSPDANSALQRLKDERDA--AVRQTQLLQQDLD 178
V+ P+ ++E ++ S T +P + AL D+ + + + + LQ ++
Sbjct: 122 VFELPAENDKPHDVEINKIIPTTASKTETPTVSKALSSSLDDTEVKKVMEECKRLQSEVQ 181
Query: 179 MLKRRGQR 186
L+ ++
Sbjct: 182 RLREENKQ 189
>sp|Q16943|VP33_APLCA Vesicle-associated membrane protein/synaptobrevin-binding protein
OS=Aplysia californica PE=2 SV=1
Length = 260
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 73/146 (50%), Gaps = 21/146 (14%)
Query: 16 ELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVTLQ 75
EL+F DLK+ N T+ + FKVKTT+PK+Y VRPN+G+++P S + V LQ
Sbjct: 15 ELRFKGPFTDVVTADLKLSNPTDRRICFKVKTTAPKRYCVRPNSGILEPKTSIAVAVMLQ 74
Query: 76 AQRESPPDMQCKDKFLLQSTIVPSNTDVD------DLPPDTFNKDSGKTIEECKLRVVYV 129
P+ + K KF++QS P + D PP+ ++ + KLR V+
Sbjct: 75 PFNYD-PNEKNKHKFMVQSMYAPDHVVESQELLWKDAPPE--------SLMDTKLRCVFE 125
Query: 130 SP-SSAQGNLEDEGLVSATRSPDANS 154
P S Q D A+R+ DA +
Sbjct: 126 MPDGSHQAPASD-----ASRATDAGA 146
>sp|O95292|VAPB_HUMAN Vesicle-associated membrane protein-associated protein B/C OS=Homo
sapiens GN=VAPB PE=1 SV=3
Length = 243
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 110/240 (45%), Gaps = 41/240 (17%)
Query: 8 QLISVHPE-ELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWD 66
Q++S+ P+ ELKF +LK+ N T+ +V FKVKTT+P++Y VRPN+G++
Sbjct: 6 QVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGA 65
Query: 67 SCIIRVTLQAQRESPPDMQCKDKFLLQSTIVPSNTDVDDLPPDTFNKDSGKTIEECKLRV 126
S + V LQ + P+ + K KF++QS P TD D+ + + + + + KLR
Sbjct: 66 SINVSVMLQP-FDYDPNEKSKHKFMVQSMFAP--TDTSDMEA-VWKEAKPEDLMDSKLRC 121
Query: 127 VYVSPSSAQG--NLEDEGLVSATRSPDAN---------------------------SALQ 157
V+ P+ ++E ++S T S +Q
Sbjct: 122 VFELPAENDKPHDVEINKIISTTASKTETPIVSKSLSSSLDDTEVKKVMEECKRLQGEVQ 181
Query: 158 RLKDE-----RDAAVRQTQLLQQD--LDMLKRRGQRKGVRGFSLMFAAFVGLIGIMVGLI 210
RL++E + +R + +Q + + L G+ +G+ L ++G+++G I
Sbjct: 182 RLREENKQFKEEDGLRMRKTVQSNSPISALAPTGKEEGLSTRLLALVVLFFIVGVIIGKI 241
>sp|A5GFS8|VAPB_PIG Vesicle-associated membrane protein-associated protein B OS=Sus
scrofa GN=VAPB PE=3 SV=1
Length = 243
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 100/189 (52%), Gaps = 15/189 (7%)
Query: 8 QLISVHPE-ELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWD 66
Q++S+ P+ ELKF +LK+ N T+ +V FKVKTT+P++Y VRPN+G++
Sbjct: 6 QVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGA 65
Query: 67 SCIIRVTLQAQRESPPDMQCKDKFLLQSTIVPSNT-DVDDLPPDTFNKDSGKTIEECKLR 125
S + V LQ + P+ + K KF++QS P++T D++ + + + + + KLR
Sbjct: 66 SINVSVMLQP-FDYDPNEKSKHKFMVQSMFAPADTSDME----AAWKEAKPEDLMDSKLR 120
Query: 126 VVYVSPSSAQG--NLEDEGLVSATRS----PDANSALQRLKDERDA--AVRQTQLLQQDL 177
V+ P+ ++E ++S T S P + AL D+ + + + + LQ ++
Sbjct: 121 CVFELPAENDKPHDVEINKIISTTASKTETPVVSKALSSALDDTEVKKVMEECKRLQSEV 180
Query: 178 DMLKRRGQR 186
L+ ++
Sbjct: 181 QRLREENKQ 189
>sp|Q9QY76|VAPB_MOUSE Vesicle-associated membrane protein-associated protein B OS=Mus
musculus GN=Vapb PE=2 SV=3
Length = 243
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 111/241 (46%), Gaps = 43/241 (17%)
Query: 8 QLISVHPE-ELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWD 66
Q++S+ P+ ELKF +LK+ N T+ +V FKVKTT P++Y VRPN+GV+
Sbjct: 6 QVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTVPRRYCVRPNSGVIDAGA 65
Query: 67 SCIIRVTLQAQRESPPDMQCKDKFLLQSTIVPSNT-DVDDLPPDTFNKDSGKTIEECKLR 125
S + V LQ + P+ + K KF++QS P +T D++ + + + + + + KLR
Sbjct: 66 SLNVSVMLQP-FDYDPNEKSKHKFMVQSMFAPPDTSDMEAV----WKEAKPEDLMDSKLR 120
Query: 126 VVYVSPS--SAQGNLEDEGLV----SATRSPDANSAL----------------------- 156
V+ P+ + ++E ++ S T +P A +L
Sbjct: 121 CVFELPAENAKPHDVEINKIIPTSASKTEAPAAAKSLTSPLDDTEVKKVMEECRRLQGEV 180
Query: 157 -------QRLKDERDAAVRQTQLLQQDLDMLKRRGQRKGVRGFSLMFAAFVGLIGIMVGL 209
++LK+E VR+ + L G+ +G+ L ++G+++G
Sbjct: 181 QRLREESRQLKEEDGLRVRKAMPSNSPVAALAATGKEEGLSARLLALVVLFFIVGVIIGK 240
Query: 210 I 210
I
Sbjct: 241 I 241
>sp|Q9Z269|VAPB_RAT Vesicle-associated membrane protein-associated protein B OS=Rattus
norvegicus GN=Vapb PE=1 SV=3
Length = 243
Score = 65.1 bits (157), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 74/127 (58%), Gaps = 7/127 (5%)
Query: 8 QLISVHPE-ELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWD 66
Q++S+ P+ ELKF +LK+ N T+ +V FKVKTT+P++Y VRPN+GV+
Sbjct: 6 QVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGVIDAGA 65
Query: 67 SCIIRVTLQAQRESPPDMQCKDKFLLQSTIVPSNT-DVDDLPPDTFNKDSGKTIEECKLR 125
S + V LQ + P+ + K KF++QS P +T D++ + + + + + + KLR
Sbjct: 66 SLNVSVMLQP-FDYDPNEKSKHKFMVQSMFAPPDTSDMEAV----WKEAKPEDLMDSKLR 120
Query: 126 VVYVSPS 132
V+ P+
Sbjct: 121 CVFELPA 127
>sp|Q5R601|VAPA_PONAB Vesicle-associated membrane protein-associated protein A OS=Pongo
abelii GN=VAPA PE=2 SV=2
Length = 249
Score = 63.9 bits (154), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 67/120 (55%), Gaps = 6/120 (5%)
Query: 14 PEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVT 73
P +LKF +LK+ N ++ V FKVKTT+P++Y VRPN+G++ P + + V
Sbjct: 20 PTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSTVTVSVM 79
Query: 74 LQAQRESPPDMQCKDKFLLQSTIVPSNT-DVDDLPPDTFNKDSGKTIEECKLRVVYVSPS 132
LQ + P+ + K KF++Q+ P NT D++ + + + + + KLR V+ P+
Sbjct: 80 LQP-FDYDPNEKSKHKFMVQTIFAPPNTSDMEAV----WKEAKPDELMDSKLRCVFEMPN 134
>sp|Q9P0L0|VAPA_HUMAN Vesicle-associated membrane protein-associated protein A OS=Homo
sapiens GN=VAPA PE=1 SV=3
Length = 249
Score = 63.9 bits (154), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 67/120 (55%), Gaps = 6/120 (5%)
Query: 14 PEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVT 73
P +LKF +LK+ N ++ V FKVKTT+P++Y VRPN+G++ P + + V
Sbjct: 20 PTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSTVTVSVM 79
Query: 74 LQAQRESPPDMQCKDKFLLQSTIVPSNT-DVDDLPPDTFNKDSGKTIEECKLRVVYVSPS 132
LQ + P+ + K KF++Q+ P NT D++ + + + + + KLR V+ P+
Sbjct: 80 LQP-FDYDPNEKSKHKFMVQTIFAPPNTSDMEAV----WKEAKPDELMDSKLRCVFEMPN 134
>sp|Q9Z270|VAPA_RAT Vesicle-associated membrane protein-associated protein A OS=Rattus
norvegicus GN=Vapa PE=1 SV=3
Length = 249
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 66/120 (55%), Gaps = 6/120 (5%)
Query: 14 PEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVT 73
P +LKF +LK+ N ++ V FKVKTT+P++Y VRPN+GV+ P + V
Sbjct: 20 PSDLKFKGPFTDVVTTNLKLQNPSDRKVCFKVKTTAPRRYCVRPNSGVIDPGSIVTVSVM 79
Query: 74 LQAQRESPPDMQCKDKFLLQSTIVPSN-TDVDDLPPDTFNKDSGKTIEECKLRVVYVSPS 132
LQ + P+ + K KF++Q+ P N +D++ + + + + + KLR V+ P+
Sbjct: 80 LQP-FDYDPNEKSKHKFMVQTIFAPPNISDMEAV----WKEAKPDELMDSKLRCVFEMPN 134
>sp|Q9WV55|VAPA_MOUSE Vesicle-associated membrane protein-associated protein A OS=Mus
musculus GN=Vapa PE=1 SV=2
Length = 249
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 66/120 (55%), Gaps = 6/120 (5%)
Query: 14 PEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVT 73
P +LKF +LK+ N ++ V FKVKTT+P++Y VRPN+G++ P + V
Sbjct: 20 PSDLKFKGPFTDVVTTNLKLQNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSIVTVSVM 79
Query: 74 LQAQRESPPDMQCKDKFLLQSTIVPSN-TDVDDLPPDTFNKDSGKTIEECKLRVVYVSPS 132
LQ + P+ + K KF++Q+ P N +D++ + + + + + KLR V+ P+
Sbjct: 80 LQP-FDYDPNEKSKHKFMVQTIFAPPNISDMEAV----WKEAKPDELMDSKLRCVFEMPN 134
>sp|Q0VCY1|VAPA_BOVIN Vesicle-associated membrane protein-associated protein A OS=Bos
taurus GN=VAPA PE=2 SV=1
Length = 249
Score = 61.2 bits (147), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 67/120 (55%), Gaps = 6/120 (5%)
Query: 14 PEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVT 73
P +LKF +LK+ N ++ V FKVKTT+P++Y VRPN+G++ P + + V
Sbjct: 20 PTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGLTVTVSVM 79
Query: 74 LQAQRESPPDMQCKDKFLLQSTIVPSN-TDVDDLPPDTFNKDSGKTIEECKLRVVYVSPS 132
LQ + P+ + K KF++Q+ P N +D++ + + + + + KLR V+ P+
Sbjct: 80 LQP-FDYDPNEKSKHKFMVQTIFAPPNISDMEAV----WKEAKPDELMDSKLRCVFEMPN 134
>sp|P40075|SCS2_YEAST Vesicle-associated membrane protein-associated protein SCS2
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=SCS2 PE=1 SV=3
Length = 244
Score = 60.8 bits (146), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 55/96 (57%), Gaps = 3/96 (3%)
Query: 10 ISVHPEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCI 69
+ + P+ L + L +Q + NN++ +AFKVKTT+PK Y VRPN VV P ++
Sbjct: 4 VEISPDVLVYKSPLTEQSTEYASISNNSDQTIAFKVKTTAPKFYCVRPNAAVVAPGETIQ 63
Query: 70 IRVTLQAQRESP-PDMQCKDKFLLQSTIVPSNTDVD 104
++V E P D +C+DKFL+ +PS D++
Sbjct: 64 VQVIFLGLTEEPAADFKCRDKFLV--ITLPSPYDLN 97
>sp|Q8VYN2|VAP42_ARATH Vesicle-associated protein 4-2 OS=Arabidopsis thaliana GN=PVA42
PE=1 SV=1
Length = 295
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 64/129 (49%), Gaps = 7/129 (5%)
Query: 15 EELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIR--- 71
E+L F +E KQ +K+ N ++ HVAFK +TT+PK F+RP ++ P ++ I
Sbjct: 114 EKLYFPYEPGKQVRSAIKIKNTSKSHVAFKFQTTAPKSCFMRPPGAILAPGETIIATVFK 173
Query: 72 -VTLQAQRESPPDMQCKDKFLLQSTIVPSNTDVDDLPPDTFNKDSGKTIEECKLRVVYVS 130
V E P D + + KF + S V D P+ F++ +E LRV+++
Sbjct: 174 FVEPPENNEKPMDQRSRVKFKIMSLKVKGPMDYV---PELFDEQKDDVSKEQILRVIFLD 230
Query: 131 PSSAQGNLE 139
P + LE
Sbjct: 231 PERSNPALE 239
>sp|Q8LPQ7|VAP43_ARATH Vesicle-associated protein 4-3 OS=Arabidopsis thaliana GN=PVA43
PE=2 SV=1
Length = 287
Score = 53.9 bits (128), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 7/128 (5%)
Query: 16 ELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVTLQ 75
+L F +E KQ +K+ N ++ HVAFK +TT PK F+RP ++ P + I V
Sbjct: 107 KLYFPYEPGKQVRSAIKIKNTSKSHVAFKFQTTVPKSCFMRPAGAILAPGEEIIATVFKF 166
Query: 76 AQ----RESPPDMQCKDKFLLQSTIVPSNTDVDDLPPDTFNKDSGKTIEECKLRVVYVSP 131
+ E P + + KF + S + TD P+ F + EE +RVV++ P
Sbjct: 167 VEPPENNEKPMEQKSGVKFKIMSLKMKVPTDYM---PELFEEQKDHVSEEQVMRVVFLDP 223
Query: 132 SSAQGNLE 139
+ +E
Sbjct: 224 ENPNSMME 231
>sp|Q6Q595|SCS22_YEAST Vesicle-associated membrane protein-associated protein SCS22
OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=SCS22 PE=1 SV=2
Length = 175
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Query: 14 PEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVT 73
PE+L F L KQ +K+ N+ E V FKV+T++P KY VRPN ++ +S +++
Sbjct: 5 PEKLVFKAPLNKQSTEYIKLENDGEKRVIFKVRTSAPTKYCVRPNVAIIGAHESVNVQIV 64
Query: 74 LQAQRESPPD---MQCKDKFLLQSTIVPS 99
+S D Q +DKFL+ + +P+
Sbjct: 65 FLGLPKSTADDEMDQKRDKFLIVTLPIPA 93
>sp|Q1ECE0|VAP41_ARATH Vesicle-associated protein 4-1 OS=Arabidopsis thaliana GN=PVA41
PE=2 SV=1
Length = 266
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 69/147 (46%), Gaps = 16/147 (10%)
Query: 17 LKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRV---- 72
L F +E KQ +K+ N ++ H AFK +TT+PK ++RP GV+ P +S V
Sbjct: 85 LYFPYEPGKQVRSAIKLKNTSKSHTAFKFQTTAPKSCYMRPPGGVLAPGESVFATVFKFV 144
Query: 73 -TLQAQRESPPDMQCKDKFLLQSTIVPSNTDVDDLPPDTFNKDSGKTIEECKLRVVYV-- 129
+ + P + + K KF + S V + P+ F++ + E LRV+++
Sbjct: 145 EHPENNEKQPLNQKSKVKFKIMSLKVKPGVEYV---PELFDEQKDQVAVEQVLRVIFIDA 201
Query: 130 -SPSSAQGNL-----EDEGLVSATRSP 150
PS+A L E E V A + P
Sbjct: 202 DRPSAALEKLKRQLDEAEAAVEARKKP 228
>sp|Q9CWP6|MSPD2_MOUSE Motile sperm domain-containing protein 2 OS=Mus musculus GN=Mospd2
PE=1 SV=2
Length = 518
Score = 36.2 bits (82), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 9 LISVHPEELKFIFELEKQGFCDLKVINN-TEHHVAFKVKTTSPKKYFVRPNTGVVQPWDS 67
L+ + P E + +E L V+ N T++ VAFKV+TT+P+KY V+P+ P S
Sbjct: 327 LLHISPAEELYFGSIESGEKKTLIVLTNVTKNIVAFKVRTTAPEKYRVKPSNSSCDPGAS 386
Query: 68 CIIRVT 73
I V+
Sbjct: 387 IDIIVS 392
>sp|Q8VEL0|MSPD1_MOUSE Motile sperm domain-containing protein 1 OS=Mus musculus
GN=Mospd1 PE=2 SV=1
Length = 213
Score = 35.4 bits (80), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Query: 6 GNQLISVHPEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPW 65
GN + V P EL F + + L + N E + FKV T+P KY V G V+P
Sbjct: 13 GNLPVFVFPTELIFYADDQSTHKQVLTLYNPYEFALKFKVLCTTPNKYVVVDAAGAVKP- 71
Query: 66 DSCIIRVTLQAQRESPPDMQCKDKFLLQ 93
C + + ++ + DKF LQ
Sbjct: 72 -QCCVDIVIRHRDVRSCHYGVIDKFRLQ 98
>sp|Q9UJG1|MSPD1_HUMAN Motile sperm domain-containing protein 1 OS=Homo sapiens
GN=MOSPD1 PE=2 SV=1
Length = 213
Score = 35.4 bits (80), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Query: 6 GNQLISVHPEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPW 65
GN + V P EL F + + L + N E + FKV T+P KY V G V+P
Sbjct: 13 GNLPVFVFPTELIFYADDQSTHKQVLTLYNPYEFALKFKVLCTTPNKYVVVDAAGAVKP- 71
Query: 66 DSCIIRVTLQAQRESPPDMQCKDKFLLQ 93
C + + ++ + DKF LQ
Sbjct: 72 -QCCVDIVIRHRDVRSCHYGVIDKFRLQ 98
>sp|Q5RJS6|MSPD1_RAT Motile sperm domain-containing protein 1 OS=Rattus norvegicus
GN=Mospd1 PE=2 SV=1
Length = 213
Score = 35.4 bits (80), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Query: 6 GNQLISVHPEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPW 65
GN + V P EL F + + L + N E + FKV T+P KY V G V+P
Sbjct: 13 GNLPVFVFPTELIFYADDQSTHKQVLTLYNPYEFALKFKVLCTTPNKYVVIDAAGAVKP- 71
Query: 66 DSCIIRVTLQAQRESPPDMQCKDKFLLQ 93
C + + ++ + DKF LQ
Sbjct: 72 -QCCVDIVIRHRDVRSCHYGVIDKFRLQ 98
>sp|Q5RCC7|MSPD1_PONAB Motile sperm domain-containing protein 1 OS=Pongo abelii
GN=MOSPD1 PE=2 SV=1
Length = 213
Score = 35.4 bits (80), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Query: 6 GNQLISVHPEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPW 65
GN + V P EL F + + L + N E + FKV T+P KY V G V+P
Sbjct: 13 GNLPVFVFPTELIFYADDQSTHKQVLTLYNPYEFALKFKVLCTTPNKYVVVNAAGAVKP- 71
Query: 66 DSCIIRVTLQAQRESPPDMQCKDKFLLQ 93
C + + ++ + DKF LQ
Sbjct: 72 -QCCVDIVIRHRDVRSCHYGVIDKFRLQ 98
>sp|Q8NHP6|MSPD2_HUMAN Motile sperm domain-containing protein 2 OS=Homo sapiens GN=MOSPD2
PE=1 SV=1
Length = 518
Score = 35.0 bits (79), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 9 LISVHPEELKFIFELEKQGFCDLKVINN-TEHHVAFKVKTTSPKKYFVRPNTGVVQPWDS 67
L+ + P E + E L V+ N T++ VAFKV+TT+P+KY V+P+ P S
Sbjct: 327 LLHISPAEELYFGSTESGEKKTLIVLTNVTKNIVAFKVRTTAPEKYRVKPSNSSCDPGAS 386
Query: 68 CIIRVT 73
I V+
Sbjct: 387 VDIVVS 392
>sp|Q2T9W7|MSPD1_BOVIN Motile sperm domain-containing protein 1 OS=Bos taurus GN=MOSPD1
PE=2 SV=1
Length = 213
Score = 34.7 bits (78), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Query: 6 GNQLISVHPEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPW 65
GN + V P EL F + + L + N E + FKV T+P KY V G V+P
Sbjct: 13 GNLPVFVFPTELIFYADDQSTHKQVLTLYNPYEFALKFKVLCTTPNKYVVVDAAGAVKP- 71
Query: 66 DSCIIRVTLQAQRESPPDMQCKDKFLLQ 93
C + + ++ + DKF LQ
Sbjct: 72 -QCCMDIVIRHRDVRSCHYGVIDKFRLQ 98
>sp|Q21244|MSP63_CAEEL Major sperm protein 63 OS=Caenorhabditis elegans GN=msp-63 PE=2
SV=3
Length = 127
Score = 33.9 bits (76), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 29/46 (63%)
Query: 31 LKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVTLQA 76
+KVIN++ + + +KTT+ K+ V P GV+ P ++ ++ V+ A
Sbjct: 32 IKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKEAVLLAVSCDA 77
>sp|Q9TVW5|MSP77_CAEEL Major sperm protein 77/79 OS=Caenorhabditis elegans GN=msp-77
PE=2 SV=3
Length = 127
Score = 33.9 bits (76), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 29/46 (63%)
Query: 31 LKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVTLQA 76
+KVIN++ + + +KTT+ K+ V P GV+ P ++ ++ V+ A
Sbjct: 32 IKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKEAVLLAVSCDA 77
>sp|Q94053|MSP78_CAEEL Major sperm protein 78 OS=Caenorhabditis elegans GN=msp-78 PE=2
SV=3
Length = 127
Score = 33.9 bits (76), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 29/46 (63%)
Query: 31 LKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVTLQA 76
+KVIN++ + + +KTT+ K+ V P GV+ P ++ ++ V+ A
Sbjct: 32 IKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKEAVLLAVSCDA 77
>sp|Q19832|MSP3_CAEEL Major sperm protein 3 OS=Caenorhabditis elegans GN=msp-3 PE=2
SV=3
Length = 127
Score = 33.9 bits (76), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 29/46 (63%)
Query: 31 LKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVTLQA 76
+KVIN++ + + +KTT+ K+ V P GV+ P ++ ++ V+ A
Sbjct: 32 IKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKEAVLLAVSCDA 77
>sp|P53017|MSP19_CAEEL Major sperm protein 19/31/40/45/50/51/53/59/61/65/81/113/142
OS=Caenorhabditis elegans GN=msp-19 PE=1 SV=2
Length = 127
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 29/46 (63%)
Query: 31 LKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVTLQA 76
+KVIN++ + + +KTT+ K+ V P GV+ P ++ ++ V+ A
Sbjct: 32 IKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKEAVLLAVSCDA 77
>sp|P05634|MSP10_CAEEL Major sperm protein 10/36/56/76 OS=Caenorhabditis elegans
GN=msp-10 PE=2 SV=4
Length = 127
Score = 33.5 bits (75), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 29/46 (63%)
Query: 31 LKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVTLQA 76
+KVIN++ + + +KTT+ K+ V P GV+ P ++ ++ V+ A
Sbjct: 32 IKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKEAVLLAVSCDA 77
>sp|Q23519|MS152_CAEEL Major sperm protein 152 OS=Caenorhabditis elegans GN=msp-152 PE=2
SV=3
Length = 127
Score = 33.5 bits (75), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 29/46 (63%)
Query: 31 LKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVTLQA 76
+KVIN++ + + +KTT+ K+ V P GV+ P ++ ++ V+ A
Sbjct: 32 IKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKEAVLLAVSCDA 77
>sp|P53018|MSP32_CAEEL Major sperm protein 32 OS=Caenorhabditis elegans GN=msp-32 PE=2
SV=1
Length = 190
Score = 33.5 bits (75), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 29/46 (63%)
Query: 31 LKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVTLQA 76
+KVIN++ + + +KTT+ K+ V P GV+ P ++ ++ V+ A
Sbjct: 95 IKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKEAVLLAVSCDA 140
>sp|P53020|MSP38_CAEEL Major sperm protein 38 OS=Caenorhabditis elegans GN=msp-38 PE=2
SV=2
Length = 127
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 28/46 (60%)
Query: 31 LKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVTLQA 76
+KVIN++ + + +KTT+ K+ V P GV P ++ ++ V+ A
Sbjct: 32 IKVINSSARRIGYGIKTTNMKRLGVDPPCGVFDPKEAVLLAVSCDA 77
>sp|Q17856|MSP55_CAEEL Major sperm protein 55/57 OS=Caenorhabditis elegans GN=msp-55
PE=2 SV=3
Length = 127
Score = 33.1 bits (74), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 29/46 (63%)
Query: 31 LKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVTLQA 76
+KVIN++ + + +KTT+ K+ V P GV+ P ++ ++ V+ A
Sbjct: 32 IKVINSSARRIVYGIKTTNMKRLGVDPPCGVLDPKEAVLLAVSCDA 77
>sp|Q9XXL3|SSP31_CAEEL Sperm-specific class P protein 31 OS=Caenorhabditis elegans
GN=ssp-31 PE=1 SV=1
Length = 107
Score = 33.1 bits (74), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 33 VINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVTLQAQRESPPDMQCKDKFLL 92
+++ +E +AFKVK+++ + Y VRP G V + L+ R + P + DK ++
Sbjct: 22 IVSESESRLAFKVKSSNNESYRVRPVYGFVDAKG----KAKLEVNRLAGPAKE--DKLVI 75
Query: 93 QSTIVPSN 100
Q VP++
Sbjct: 76 QYAEVPAD 83
>sp|P53019|MSP33_CAEEL Major sperm protein 33 OS=Caenorhabditis elegans GN=msp-33 PE=2
SV=2
Length = 127
Score = 33.1 bits (74), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 28/46 (60%)
Query: 31 LKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVTLQA 76
+KVIN++ + + +KTT+ K+ V P GV+ P ++ + V+ A
Sbjct: 32 IKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKEAVFLAVSCDA 77
>sp|P53022|MSP2_GLORO Major sperm protein 2 OS=Globodera rostochiensis GN=MSP-2 PE=2
SV=2
Length = 126
Score = 32.3 bits (72), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 31 LKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVTLQA 76
++VIN + + F KTT PK+ + P GV+ P +S + ++ A
Sbjct: 31 VRVINPGTNRIGFAFKTTKPKRINMNPPNGVLGPKESVNVAISCDA 76
>sp|Q96LR7|CB050_HUMAN Uncharacterized protein C2orf50 OS=Homo sapiens GN=C2orf50 PE=2
SV=1
Length = 162
Score = 32.3 bits (72), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 129 VSPSSAQGNLEDEGLVSATRSPDANSALQRLKDERDAAVRQTQLLQQDLDMLKRRGQRKG 188
VSP++ G + GL ++P A A + + V+Q QL ++ L+ +RRGQ++
Sbjct: 28 VSPAARGGPMASRGLAGGCQAPQALKAQRVAQGAACDGVQQDQLWRELLEA-ERRGQQRW 86
Query: 189 VRGFSLM 195
++ +S +
Sbjct: 87 IQNWSFL 93
>sp|B0BB44|ISPG_CHLTB 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Chlamydia
trachomatis serovar L2b (strain UCH-1/proctitis) GN=ispG
PE=3 SV=1
Length = 602
Score = 32.0 bits (71), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 62 VQPWDSCIIRVTLQAQRESPPDMQCKDKFLLQSTIVPSNTDVDDLP 107
+Q W I+RVT+Q RE KD+ + Q+ +P D+ P
Sbjct: 53 LQEWGCDIVRVTVQGLREVHACEHIKDRLIQQNISIPLVADIHFFP 98
>sp|Q3KMW4|ISPG_CHLTA 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Chlamydia
trachomatis serovar A (strain HAR-13 / ATCC VR-571B)
GN=ispG PE=3 SV=1
Length = 602
Score = 32.0 bits (71), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 62 VQPWDSCIIRVTLQAQRESPPDMQCKDKFLLQSTIVPSNTDVDDLP 107
+Q W I+RVT+Q RE KD+ + Q+ +P D+ P
Sbjct: 53 LQEWGCDIVRVTVQGLREVHACEHIKDRLIQQNISIPLVADIHFFP 98
>sp|O84060|ISPG_CHLTR 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Chlamydia
trachomatis (strain D/UW-3/Cx) GN=ispG PE=3 SV=1
Length = 602
Score = 32.0 bits (71), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 62 VQPWDSCIIRVTLQAQRESPPDMQCKDKFLLQSTIVPSNTDVDDLP 107
+Q W I+RVT+Q RE KD+ + Q+ +P D+ P
Sbjct: 53 LQEWGCDIVRVTVQGLREVHACEHIKDRLIQQNISIPLVADIHFFP 98
>sp|A3LZ54|MED14_PICST Mediator of RNA polymerase II transcription subunit 14
OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS
6054 / NBRC 10063 / NRRL Y-11545) GN=RGR1 PE=3 SV=3
Length = 1112
Score = 31.6 bits (70), Expect = 4.1, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Query: 37 TEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVTLQAQRESPPDMQCKDKFLLQSTI 96
T H + K T + + P TG+ D C ++ + + SPP + F+ +S +
Sbjct: 480 TPHQLLIKSSPTKSTIFCINPLTGLFYFIDPCPVQNLIAKKINSPPTVVKNKNFVAESDM 539
Query: 97 VPSNTDVDDLPP---DTFNKD 114
V NT VD L + FNK+
Sbjct: 540 V--NTIVDGLTQLRLEIFNKE 558
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,902,321
Number of Sequences: 539616
Number of extensions: 3546294
Number of successful extensions: 8826
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 8752
Number of HSP's gapped (non-prelim): 72
length of query: 226
length of database: 191,569,459
effective HSP length: 113
effective length of query: 113
effective length of database: 130,592,851
effective search space: 14756992163
effective search space used: 14756992163
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)