Query 027222
Match_columns 226
No_of_seqs 198 out of 1424
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 10:48:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027222.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027222hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2igv_A Peptidyl-prolyl CIS-tra 100.0 3.7E-56 1.3E-60 360.4 21.3 171 56-226 3-173 (173)
2 1a58_A Cyclophilin; isomerase, 100.0 2.5E-55 8.6E-60 356.7 22.3 171 55-225 5-177 (177)
3 2wfi_A Peptidyl-prolyl CIS-tra 100.0 6.3E-55 2.2E-59 354.8 21.8 170 55-224 8-179 (179)
4 1qng_A Peptidyl-prolyl CIS-tra 100.0 2.9E-55 9.8E-60 354.2 19.5 169 55-224 2-170 (170)
5 2poy_A Peptidyl-prolyl CIS-tra 100.0 6.5E-55 2.2E-59 356.3 20.7 170 54-223 17-186 (186)
6 2he9_A NK-tumor recognition pr 100.0 1.4E-54 4.8E-59 355.9 21.9 175 51-225 14-190 (192)
7 2z6w_A Peptidyl-prolyl CIS-tra 100.0 1.7E-54 5.7E-59 348.2 21.2 162 56-225 3-165 (165)
8 2cmt_A Peptidyl-prolyl CIS-tra 100.0 1.8E-54 6.1E-59 349.9 20.6 164 54-225 8-172 (172)
9 3pmp_A Cyclophilin A; peptidyl 100.0 3E-54 1E-58 346.5 20.8 162 56-225 2-164 (164)
10 2r99_A Peptidyl-prolyl CIS-tra 100.0 3.7E-54 1.3E-58 348.5 21.2 162 56-225 11-173 (173)
11 1mzw_A Cyclophilin H, U-snRNP- 100.0 4.6E-54 1.6E-58 349.1 18.8 167 56-224 10-177 (177)
12 2haq_A Cyclophilin; rotamase, 100.0 6.3E-54 2.1E-58 346.4 19.4 163 53-224 8-172 (172)
13 3rdd_A Peptidyl-prolyl CIS-tra 100.0 1.4E-53 4.7E-58 348.2 20.3 164 54-225 20-184 (184)
14 3ich_A Peptidyl-prolyl CIS-tra 100.0 2.1E-53 7.2E-58 348.0 19.8 167 51-225 10-178 (188)
15 4fru_A Cyclophilin B, peptidyl 100.0 4.2E-53 1.4E-57 346.0 20.3 167 52-225 8-175 (185)
16 3k2c_A Peptidyl-prolyl CIS-tra 100.0 1.2E-52 4E-57 344.9 20.8 163 55-225 26-191 (193)
17 1z81_A Cyclophilin; structural 100.0 3.2E-52 1.1E-56 349.4 20.4 168 55-224 58-229 (229)
18 2c3b_A Ppiase, cyclophilin; is 100.0 1.8E-52 6.3E-57 338.3 13.3 161 55-224 2-172 (172)
19 2ose_A Probable peptidyl-proly 100.0 1.1E-49 3.6E-54 335.9 18.9 169 55-225 13-207 (234)
20 1ihg_A Cyclophilin 40; ppiase 100.0 2.5E-49 8.4E-54 354.1 20.8 170 56-225 15-185 (370)
21 2fu0_A Cyclophilin, putative; 100.0 3.7E-48 1.3E-52 309.7 17.0 144 70-224 14-159 (160)
22 1zkc_A Peptidyl-prolyl CIS-tra 100.0 9.3E-48 3.2E-52 316.1 19.6 156 56-225 17-175 (197)
23 2x7k_A Peptidyl-prolyl CIS-tra 100.0 5E-48 1.7E-52 310.6 16.4 153 56-224 11-165 (166)
24 1w74_A Peptidyl-prolyl CIS-tra 100.0 9E-48 3.1E-52 315.1 18.1 158 60-224 25-191 (191)
25 2poe_A Cyclophilin-like protei 100.0 8.4E-48 2.9E-52 314.1 17.8 146 69-225 24-175 (185)
26 2ok3_A Peptidyl-prolyl CIS-tra 100.0 1.1E-47 3.6E-52 307.5 17.9 147 68-225 7-156 (161)
27 2b71_A Cyclophilin-like protei 100.0 2E-47 6.8E-52 314.1 17.3 154 56-225 38-193 (196)
28 2a2n_A Peptidylprolyl isomeras 100.0 3.8E-47 1.3E-51 307.9 17.3 143 70-223 30-175 (176)
29 3bo7_A Peptidyl-prolyl CIS-tra 100.0 3.9E-47 1.3E-51 314.2 17.7 155 57-225 5-173 (201)
30 2k7n_A Peptidyl-prolyl CIS-tra 100.0 4.3E-47 1.5E-51 313.2 16.1 154 56-225 11-166 (203)
31 2hq6_A Serologically defined c 100.0 3.9E-46 1.3E-50 304.1 15.6 157 52-225 20-180 (185)
32 1v9t_A Cyclophilin B; beta bar 100.0 6.8E-46 2.3E-50 298.5 15.0 152 56-225 4-166 (166)
33 1lop_A Cyclophilin A; rotamase 100.0 1.3E-45 4.6E-50 296.2 14.1 143 69-225 7-164 (164)
34 3s6m_A Peptidyl-prolyl CIS-tra 100.0 9.6E-45 3.3E-49 292.1 14.8 142 70-224 12-167 (167)
35 3bkp_A Cyclophilin; malaria, i 100.0 8.1E-45 2.8E-49 305.6 14.9 159 50-225 15-193 (232)
36 3rfy_A Peptidyl-prolyl CIS-tra 100.0 8.7E-41 3E-45 296.4 9.6 163 41-220 153-355 (369)
37 3kop_A Uncharacterized protein 95.3 0.12 4.2E-06 41.0 9.4 33 59-93 22-55 (188)
38 2nnz_A Hypothetical protein; b 92.9 0.14 4.7E-06 39.7 5.0 105 61-203 32-143 (153)
39 1zx8_A Hypothetical protein TM 71.2 16 0.00053 27.4 7.1 45 154-203 74-124 (136)
40 1x7f_A Outer surface protein; 22.5 61 0.0021 28.5 3.4 50 153-203 326-376 (385)
41 2p0o_A Hypothetical protein DU 20.3 61 0.0021 28.3 2.9 50 153-203 300-350 (372)
No 1
>2igv_A Peptidyl-prolyl CIS-trans isomerase 3; rotamase; 1.67A {Caenorhabditis elegans} SCOP: b.62.1.1 PDB: 1e3b_A 1e8k_A 1dyw_A 2igw_A 2hqj_A
Probab=100.00 E-value=3.7e-56 Score=360.36 Aligned_cols=171 Identities=68% Similarity=1.190 Sum_probs=164.2
Q ss_pred CcEEEEEEEECCEEeeEEEEEEecCCCchhHHHHHHhhcCCCCcccCCCCccccCCEEEEeecCceEeeCCCCCCCCCCC
Q 027222 56 THKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGRGG 135 (226)
Q Consensus 56 ~~~v~~~i~~~~~~~G~IvieL~~~~aP~~v~nF~~L~~g~~g~~~~~~~~~Y~g~~f~Rv~~~~~iq~Gd~~~~~~~~~ 135 (226)
+++||||+++++++.|+|+||||++.||+||+||++||++++|.|..++..||+|+.||||+|+|||||||+..+++.++
T Consensus 3 ~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G~gg 82 (173)
T 2igv_A 3 RSKVFFDITIGGKASGRIVMELYDDVVPKTAGNFRALCTGENGIGKSGKPLHFKGSKFHRIIPNFMIQGGDFTRGNGTGG 82 (173)
T ss_dssp CCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTSSSSCC
T ss_pred CCEEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHhcCCCCCCccCccceECCCEEEEEECCCEEEcCCCCCCCCCCC
Confidence 67999999999999999999999999999999999999998887777888899999999999999999999988889999
Q ss_pred ccccCCcccccccccccCCceEEEeeecCCCCCcceeEEEccCCCCCCCCccEEEEEEcCHHHHHHHHhCCCCCCCcccc
Q 027222 136 ESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGEPKSK 215 (226)
Q Consensus 136 ~~~~~~~~~~e~~~~~h~~~G~l~~~~~~~~~~~sqF~I~l~~~~~Ld~~~~VFGrVi~G~~vl~~I~~~~~~~~~P~~~ 215 (226)
.++|+..+++|++.++|+++|+|+||+++|++++|||||++.++|+||++|+|||||++|||||++|++.++++++|.++
T Consensus 83 ~siyg~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv~G~dvv~~I~~~~t~~~~P~~~ 162 (173)
T 2igv_A 83 ESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTEWLDGKHVVFGRVVEGLDVVKAVESNGSQSGKPVKD 162 (173)
T ss_dssp CBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTSCCSSC
T ss_pred CccCCCcccCcccccCCCCCeEEEEeeCCCCCcceEEEEEcCCccccCCCeeEEEEEecCHHHHHHHHhCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999888999999
Q ss_pred eEEeeeeeecC
Q 027222 216 VVISNSGEMAL 226 (226)
Q Consensus 216 i~I~~cg~l~~ 226 (226)
|+|.+||+|+.
T Consensus 163 v~I~~~g~l~~ 173 (173)
T 2igv_A 163 CMIADCGQLKA 173 (173)
T ss_dssp EEEEEEEEECC
T ss_pred EEEEEeEEEcC
Confidence 99999999974
No 2
>1a58_A Cyclophilin; isomerase, ppiase; 1.95A {Brugia malayi} SCOP: b.62.1.1 PDB: 1a33_A 1c5f_A*
Probab=100.00 E-value=2.5e-55 Score=356.67 Aligned_cols=171 Identities=56% Similarity=0.928 Sum_probs=161.2
Q ss_pred cCcEEEEEEEECCEEeeEEEEEEecCCCchhHHHHHHhhcCCCCcccC-CCCccccCCEEEEeecCceEeeCCCCCCCCC
Q 027222 55 VTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKS-GKPLYYKGSSFHRIIPSFMIQGGDFTLGDGR 133 (226)
Q Consensus 55 ~~~~v~~~i~~~~~~~G~IvieL~~~~aP~~v~nF~~L~~g~~g~~~~-~~~~~Y~g~~f~Rv~~~~~iq~Gd~~~~~~~ 133 (226)
.+++||||+++++++.|+|+||||++.||+||+||++||++++|.|+. |+.+||+|+.||||+|+|||||||+..+++.
T Consensus 5 ~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~~~~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~ 84 (177)
T 1a58_A 5 DRRRVFLDVTIDGNLAGRIVMELYNDIAPRTCNNFLMLCTGMAGTGKISGKPLHYKGSTFHRVIKNFMIQGGDFTKGDGT 84 (177)
T ss_dssp GCEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBCCCTTCBEEEEETTTEEEECCCSSSSSS
T ss_pred CCcEEEEEEEECCEeceeEEEEEcCCCCchHHHHHHHHhcCCcCcccccCCcceeCCCEEEEEECCCEEEeCCccCCCCC
Confidence 368999999999999999999999999999999999999998876644 5667999999999999999999999888899
Q ss_pred CCccccCCcccccccccccCCceEEEeeecCCCCCcceeEEEccCCCCCCCCccEEEEEEcCHHHHHHHHhCCCC-CCCc
Q 027222 134 GGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQ-SGEP 212 (226)
Q Consensus 134 ~~~~~~~~~~~~e~~~~~h~~~G~l~~~~~~~~~~~sqF~I~l~~~~~Ld~~~~VFGrVi~G~~vl~~I~~~~~~-~~~P 212 (226)
++.++|+..|++|++.++|+++|+|+|||++|++++|||||+++++|+||++|+|||||++|||||++|++.+++ +++|
T Consensus 85 gg~si~g~~f~dE~~~~~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~~~~~~~P 164 (177)
T 1a58_A 85 GGESIYGGMFDDEEFVMKHDEPFVVSMANKGPNTNGSQFFITTTPAPHLNNIHVVFGKVVSGQEVVTKIEYLKTNSKNRP 164 (177)
T ss_dssp CCCCTTSSCBCCCCCCSCCCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCB
T ss_pred CCCcccCCcccCcccCcccCCCeEEEEeeCCCCCceeEEEEECCCCCccCCCEEEEEEEEcCHHHHHHHHhCCCCCCCcC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999998865 4899
Q ss_pred ccceEEeeeeeec
Q 027222 213 KSKVVISNSGEMA 225 (226)
Q Consensus 213 ~~~i~I~~cg~l~ 225 (226)
.++|+|.+||+|+
T Consensus 165 ~~~v~I~~~G~l~ 177 (177)
T 1a58_A 165 LADVVILNCGELV 177 (177)
T ss_dssp SSCEEEEEEEEEC
T ss_pred CCCeEEEEeEEEC
Confidence 9999999999985
No 3
>2wfi_A Peptidyl-prolyl CIS-trans isomerase G; phosphoprotein, PRE-mRNA splicing, alternative splicing, nucleus, rotamase, cyclosporin; HET: OCS; 0.75A {Homo sapiens} PDB: 2wfj_A* 2gw2_A
Probab=100.00 E-value=6.3e-55 Score=354.79 Aligned_cols=170 Identities=55% Similarity=0.950 Sum_probs=160.8
Q ss_pred cCcEEEEEEEECCEEeeEEEEEEecCCCchhHHHHHHhhcCCCCccc-CCCCccccCCEEEEeecCceEeeCCCCCCCCC
Q 027222 55 VTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGK-SGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGR 133 (226)
Q Consensus 55 ~~~~v~~~i~~~~~~~G~IvieL~~~~aP~~v~nF~~L~~g~~g~~~-~~~~~~Y~g~~f~Rv~~~~~iq~Gd~~~~~~~ 133 (226)
.+++||||+.+++++.|+|+||||++.||+||+||++||+|++|.++ .++.+||+|+.||||+|+|||||||+..+++.
T Consensus 8 ~~~~vf~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~ 87 (179)
T 2wfi_A 8 QRPRCFFDIAINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFSEGNGR 87 (179)
T ss_dssp CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTTTSSSS
T ss_pred CCCeEEEEEEECCccceEEEEEEcCCCCChHHHHHHHHhcCCcCcccccccCCeECCCEEEEEECCCEEEcccccCCCCC
Confidence 47899999999999999999999999999999999999999887764 35678999999999999999999999888899
Q ss_pred CCccccCCcccccccccccCCceEEEeeecCCCCCcceeEEEccCCCCCCCCccEEEEEEcCHHHHHHHHhCCCC-CCCc
Q 027222 134 GGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQ-SGEP 212 (226)
Q Consensus 134 ~~~~~~~~~~~~e~~~~~h~~~G~l~~~~~~~~~~~sqF~I~l~~~~~Ld~~~~VFGrVi~G~~vl~~I~~~~~~-~~~P 212 (226)
++.++|+..+++|++.++|+++|+|+|||++|++++|||||+++++|+||++|+|||||++|||||++|++.+++ +++|
T Consensus 88 gg~si~g~~f~dE~~~~~h~~~G~lsMAn~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~t~~~~~P 167 (179)
T 2wfi_A 88 GGESIYGGFFEDESFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIENQKTDAASKP 167 (179)
T ss_dssp CCCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTCCBCTTSCB
T ss_pred CCCcccCCcccccccCcCcCCCeEEEEEeCCCCCcceEEEEEcCCCcccCCCeeEEEEEeCCHHHHHHHHcCCCCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999998865 5899
Q ss_pred ccceEEeeeeee
Q 027222 213 KSKVVISNSGEM 224 (226)
Q Consensus 213 ~~~i~I~~cg~l 224 (226)
.++|+|.+||+|
T Consensus 168 ~~~v~I~~~G~l 179 (179)
T 2wfi_A 168 FAEVRILSCGEL 179 (179)
T ss_dssp SSCEEEEEEEEC
T ss_pred CCCeEEEeCeeC
Confidence 999999999986
No 4
>1qng_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, cyclophilin-cyclosporin complex, immunosuppressant, cyclophilin; HET: BMT; 2.1A {Plasmodium falciparum} SCOP: b.62.1.1 PDB: 1qnh_A*
Probab=100.00 E-value=2.9e-55 Score=354.20 Aligned_cols=169 Identities=62% Similarity=1.058 Sum_probs=160.1
Q ss_pred cCcEEEEEEEECCEEeeEEEEEEecCCCchhHHHHHHhhcCCCCcccCCCCccccCCEEEEeecCceEeeCCCCCCCCCC
Q 027222 55 VTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGRG 134 (226)
Q Consensus 55 ~~~~v~~~i~~~~~~~G~IvieL~~~~aP~~v~nF~~L~~g~~g~~~~~~~~~Y~g~~f~Rv~~~~~iq~Gd~~~~~~~~ 134 (226)
.+++||||+++++++.|+|+||||++.||+||+||++||++. |.|..++..+|+|+.||||+|+|||||||+..+++.+
T Consensus 2 ~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~-g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~g 80 (170)
T 1qng_A 2 KRSKVFFDISIDNSNAGRIIFELFSDITPRTCENFRALCTGE-KIGSRGKNLHYKNSIFHRIIPQFMCQGGDITNGNGSG 80 (170)
T ss_dssp CSCEEEEEEEESSSEEEEEEEEECTTTCHHHHHHHHHHHHTC-EECTTSSEECCTTCBCCEEETTTEEEECCTTTSSSSC
T ss_pred CCCEEEEEEeECCEeceeEEEEEcCCCCCHHHHHHHHHhccC-CcCccCccceECCCEEEEEECCCEEEcCCccCCCCCC
Confidence 368999999999999999999999999999999999999865 5555667777999999999999999999998888999
Q ss_pred CccccCCcccccccccccCCceEEEeeecCCCCCcceeEEEccCCCCCCCCccEEEEEEcCHHHHHHHHhCCCCCCCccc
Q 027222 135 GESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGEPKS 214 (226)
Q Consensus 135 ~~~~~~~~~~~e~~~~~h~~~G~l~~~~~~~~~~~sqF~I~l~~~~~Ld~~~~VFGrVi~G~~vl~~I~~~~~~~~~P~~ 214 (226)
+.++|+..+++|++.++|+++|+|+||+++|++++|||||+++++|+||++|+|||||++|||||++|++.++++++|.+
T Consensus 81 g~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~Ldg~~~vFG~Vv~G~dvv~~I~~~~t~~~~P~~ 160 (170)
T 1qng_A 81 GESIYGRSFTDENFNMKHDQPGLLSMANAGPNTNSSQFFITLVPCPWLDGKHVVFGKVIEGMNVVREMEKEGAKSGYVKR 160 (170)
T ss_dssp CCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTCCCSS
T ss_pred CccccCCcccccccccccCCCCEEEEeecCCCCcccEEEEECCCCcccCCCeeEEEEEECCHHHHHHHHhCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999888899999
Q ss_pred ceEEeeeeee
Q 027222 215 KVVISNSGEM 224 (226)
Q Consensus 215 ~i~I~~cg~l 224 (226)
+|+|.+||+|
T Consensus 161 ~v~I~~cG~l 170 (170)
T 1qng_A 161 SVVITDCGEL 170 (170)
T ss_dssp CEEEEEEEEC
T ss_pred CeEEEeceeC
Confidence 9999999986
No 5
>2poy_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, isomerase, S genomics, structural genomics consortium; HET: BMT; 1.80A {Cryptosporidium parvum iowa II} PDB: 2plu_A*
Probab=100.00 E-value=6.5e-55 Score=356.27 Aligned_cols=170 Identities=66% Similarity=1.110 Sum_probs=161.6
Q ss_pred ccCcEEEEEEEECCEEeeEEEEEEecCCCchhHHHHHHhhcCCCCcccCCCCccccCCEEEEeecCceEeeCCCCCCCCC
Q 027222 54 KVTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGR 133 (226)
Q Consensus 54 ~~~~~v~~~i~~~~~~~G~IvieL~~~~aP~~v~nF~~L~~g~~g~~~~~~~~~Y~g~~f~Rv~~~~~iq~Gd~~~~~~~ 133 (226)
..+++||||+.+++++.|+|+||||++.||+||+||++||++++|.|..++..+|+|+.||||+|+|||||||+..+++.
T Consensus 17 ~~~~~v~~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~Y~g~~FhRVi~~f~iQgGd~~~~~G~ 96 (186)
T 2poy_A 17 QGNPVVYFDISIGQTPAGRITMELFADKVPITAENFRALCTGEKGMGQSGKPLCYTGSFFHRIIPQFMIQGGDFTRGDGT 96 (186)
T ss_dssp -CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTSSSS
T ss_pred CCCCEEEEEEeECCEecccEEEEEeCCCCcHHHHHHHHHhcccCCccccCccceECCCEEEEEeCCCEEEeCCCCCCCCC
Confidence 35789999999999999999999999999999999999999888887778888899999999999999999999888899
Q ss_pred CCccccCCcccccccccccCCceEEEeeecCCCCCcceeEEEccCCCCCCCCccEEEEEEcCHHHHHHHHhCCCCCCCcc
Q 027222 134 GGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGEPK 213 (226)
Q Consensus 134 ~~~~~~~~~~~~e~~~~~h~~~G~l~~~~~~~~~~~sqF~I~l~~~~~Ld~~~~VFGrVi~G~~vl~~I~~~~~~~~~P~ 213 (226)
++.++|+..|++|++.++|.++|+|+||+++|++++|||||+++++|+||++|+|||||++|||||++|++.++++++|.
T Consensus 97 gg~si~g~~f~dE~~~l~h~~~G~lsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~P~ 176 (186)
T 2poy_A 97 GGESIYGSKFRDENFVYTHDAPFLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGKVLEGMEVVKSIEKCGSQNGKPT 176 (186)
T ss_dssp CCCCTTC-CBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHTCCTTSCCS
T ss_pred CCCccCCCcccCcccccccCCCcEEEEeeCCCCCcccEEEEECCCCcccCCCeeEEEEEecCHHHHHHHHhCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999889999
Q ss_pred cceEEeeeee
Q 027222 214 SKVVISNSGE 223 (226)
Q Consensus 214 ~~i~I~~cg~ 223 (226)
++|+|.+||+
T Consensus 177 ~~v~I~~cG~ 186 (186)
T 2poy_A 177 KSVCITASGV 186 (186)
T ss_dssp SCEEEEEEEC
T ss_pred CCEEEEeCCC
Confidence 9999999996
No 6
>2he9_A NK-tumor recognition protein; cyclosporin, isomerase, membrane, repeat, rotamase, peptidylprolyl isomerase, structural genomics; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.4e-54 Score=355.91 Aligned_cols=175 Identities=52% Similarity=0.894 Sum_probs=161.5
Q ss_pred cccccCcEEEEEEEECCEEeeEEEEEEecCCCchhHHHHHHhhcCCCCccc-CCCCccccCCEEEEeecCceEeeCCCCC
Q 027222 51 ELEKVTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGK-SGKPLYYKGSSFHRIIPSFMIQGGDFTL 129 (226)
Q Consensus 51 ~~~~~~~~v~~~i~~~~~~~G~IvieL~~~~aP~~v~nF~~L~~g~~g~~~-~~~~~~Y~g~~f~Rv~~~~~iq~Gd~~~ 129 (226)
-....+++||||+.+++++.|+|+||||++.||+||+||++||+|++|.|+ .++.+||+|+.||||+|+|||||||+..
T Consensus 14 ~~~~~~~~vf~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~k~~~Y~g~~FhRVi~~fmiQgGd~~~ 93 (192)
T 2he9_A 14 LVPRGSPQCHFDIEINREPVGRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLCYKGSTFHRVVKNFMIQGGDFSE 93 (192)
T ss_dssp -----CCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTTT
T ss_pred ccccCCCeEEEEEEECCEecceEEEEEcCCCCchHHHHHHHHhcCCCCcccccccCCeECCCEEEEEECCCEEEcCcccC
Confidence 344568899999999999999999999999999999999999999888764 3577899999999999999999999988
Q ss_pred CCCCCCccccCCcccccccccccCCceEEEeeecCCCCCcceeEEEccCCCCCCCCccEEEEEEcCHHHHHHHHhCCCC-
Q 027222 130 GDGRGGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQ- 208 (226)
Q Consensus 130 ~~~~~~~~~~~~~~~~e~~~~~h~~~G~l~~~~~~~~~~~sqF~I~l~~~~~Ld~~~~VFGrVi~G~~vl~~I~~~~~~- 208 (226)
+++.++.++|+..+++|++.++|+++|+|+|||.+|++++|||||++.++|+||++|+|||||++|||||++|++.+++
T Consensus 94 ~~G~gg~siyg~~f~dE~~~l~h~~~G~lsMAn~gp~tngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~ 173 (192)
T 2he9_A 94 GNGKGGESIYGGYFKDENFILKHDRAFLLSMANRGKHTNGSQFFITTKPAPHLDGVHVVFGLVISGFEVIEQIENLKTDA 173 (192)
T ss_dssp SSSSCCCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCT
T ss_pred CCCCCCCcccCCcccCccccCCCCCCeEEEEEeCCCCCcceEEEEEcCCCcccCCCccEEEEEEeCHHHHHHHHcCCcCC
Confidence 8899999999999999999999999999999999999999999999999999999999999999999999999998865
Q ss_pred CCCcccceEEeeeeeec
Q 027222 209 SGEPKSKVVISNSGEMA 225 (226)
Q Consensus 209 ~~~P~~~i~I~~cg~l~ 225 (226)
+++|.++|+|.+||+|.
T Consensus 174 ~~~P~~~v~I~~~g~l~ 190 (192)
T 2he9_A 174 ASRPYADVRVIDCGVLA 190 (192)
T ss_dssp TSCBSSCEEEEEEEECC
T ss_pred CCCCcCCeEEEEeEEEc
Confidence 58999999999999986
No 7
>2z6w_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin D; HET: BMT MLE CIT; 0.96A {Homo sapiens} SCOP: b.62.1.1 PDB: 3rcg_A* 3r49_A* 3r54_A 3r56_A* 3r57_A* 3r59_A* 3rcf_A* 3r4g_A* 3rci_X* 3rck_X* 3rcl_A* 3rd9_X* 3rda_X* 3rdb_A* 3rdc_A* 2bit_X 2biu_X 3qyu_A 3k0m_A 1ak4_A* ...
Probab=100.00 E-value=1.7e-54 Score=348.20 Aligned_cols=162 Identities=64% Similarity=1.147 Sum_probs=155.5
Q ss_pred CcEEEEEEEECCEEeeEEEEEEecCCCchhHHHHHHhhcCCCCcccCCCCcc-ccCCEEEEeecCceEeeCCCCCCCCCC
Q 027222 56 THKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLY-YKGSSFHRIIPSFMIQGGDFTLGDGRG 134 (226)
Q Consensus 56 ~~~v~~~i~~~~~~~G~IvieL~~~~aP~~v~nF~~L~~g~~g~~~~~~~~~-Y~g~~f~Rv~~~~~iq~Gd~~~~~~~~ 134 (226)
+++||||+.+++++.|+|+||||++.||+||+||++||+|++| | |+|+.||||+|+|||||||+..+++.+
T Consensus 3 ~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g--------~~Y~g~~fhRvi~~f~iQgGd~~~~~g~g 74 (165)
T 2z6w_A 3 NPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKG--------FGYKGSTFHRVIPSFMCQAGDFTNHNGTG 74 (165)
T ss_dssp CCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTS--------CCSTTCBEEEEETTTEEEECCTTTSSSSC
T ss_pred CCEEEEEEEECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCCC--------ccCcCCEEEEEECCCEEEeCCccCCCCCC
Confidence 5799999999999999999999999999999999999987655 7 999999999999999999998888999
Q ss_pred CccccCCcccccccccccCCceEEEeeecCCCCCcceeEEEccCCCCCCCCccEEEEEEcCHHHHHHHHhCCCCCCCccc
Q 027222 135 GESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGEPKS 214 (226)
Q Consensus 135 ~~~~~~~~~~~e~~~~~h~~~G~l~~~~~~~~~~~sqF~I~l~~~~~Ld~~~~VFGrVi~G~~vl~~I~~~~~~~~~P~~ 214 (226)
+.++|+..+++|+..++|.++|+|+|++++|++++|||||++.++|+||++|+|||||++|||||++|++.++++++|.+
T Consensus 75 g~si~g~~f~dE~~~l~h~~~G~lsmA~~gp~s~~SQFfI~~~~~~~Ldg~~~vFG~Vv~G~dvv~~I~~~~~~~~~P~~ 154 (165)
T 2z6w_A 75 GKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIEGMDVVKKIESFGSKSGRTSK 154 (165)
T ss_dssp CCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHTCCTTSCCSS
T ss_pred CCcccCCcccCcccccccCCCCEEEEeeCCCCCcccEEEEEcCCCcccCCCeeEEEEEEcCHHHHHHHHhCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988899999
Q ss_pred ceEEeeeeeec
Q 027222 215 KVVISNSGEMA 225 (226)
Q Consensus 215 ~i~I~~cg~l~ 225 (226)
+|+|.+||+|+
T Consensus 155 ~v~I~~~g~l~ 165 (165)
T 2z6w_A 155 KIVITDCGQLS 165 (165)
T ss_dssp CEEEEEEEECC
T ss_pred cEEEEEeEEEC
Confidence 99999999984
No 8
>2cmt_A Peptidyl-prolyl CIS-trans isomerase E; rotamase activity, rotamase, RNA-binding, cyclosporin, cyclophilin, beta-barrel; 1.50A {Schistosoma mansoni} PDB: 2ck1_A
Probab=100.00 E-value=1.8e-54 Score=349.94 Aligned_cols=164 Identities=59% Similarity=1.064 Sum_probs=156.2
Q ss_pred ccCcEEEEEEEECCEEeeEEEEEEecCCCchhHHHHHHhhcCCCCcccCCCCcc-ccCCEEEEeecCceEeeCCCCCCCC
Q 027222 54 KVTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLY-YKGSSFHRIIPSFMIQGGDFTLGDG 132 (226)
Q Consensus 54 ~~~~~v~~~i~~~~~~~G~IvieL~~~~aP~~v~nF~~L~~g~~g~~~~~~~~~-Y~g~~f~Rv~~~~~iq~Gd~~~~~~ 132 (226)
..+++||||+.+++++.|+|+||||++.||+||+||++||++++| | |+|+.||||+|+|||||||+..+++
T Consensus 8 ~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g--------~~Y~g~~FhRvi~~f~iQgGd~~~~~G 79 (172)
T 2cmt_A 8 RNLPRVFFDIRIGNGDAGRIVMELRSDIVPRTAENFRALCTGERG--------FGYHNCCFHRVIPQFMCQGGDFVKGDG 79 (172)
T ss_dssp -CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTS--------CSSTTCBEEEEETTTEEEECCTTTSSS
T ss_pred CCCCEEEEEEEECCeecceEEEEEcCCCCCHHHHHHHHHhccCCC--------ceECCCEEEEEECCCEEEcCCccCCCC
Confidence 347899999999999999999999999999999999999987654 6 9999999999999999999988889
Q ss_pred CCCccccCCcccccccccccCCceEEEeeecCCCCCcceeEEEccCCCCCCCCccEEEEEEcCHHHHHHHHhCCCCCCCc
Q 027222 133 RGGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGEP 212 (226)
Q Consensus 133 ~~~~~~~~~~~~~e~~~~~h~~~G~l~~~~~~~~~~~sqF~I~l~~~~~Ld~~~~VFGrVi~G~~vl~~I~~~~~~~~~P 212 (226)
.++.++|+..+++|++.++|.++|+|+||+++|++++|||||++.++|+||++|+|||||++|||||++|++.++++++|
T Consensus 80 ~gg~si~g~~f~dE~~~l~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tvFG~Vv~G~dvv~~I~~~~~~~~~P 159 (172)
T 2cmt_A 80 TGGKSIYGRKFDDENFQLRHEGFGVLSMANSGPNTNGSQFFICTTKCDWLDGKHVVFGRVVDGQNVVKKMESVGSKSGKV 159 (172)
T ss_dssp SCCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHGGGGCCTTCCC
T ss_pred CCCCccCCCcccccccCcccCCceEEEEeeCCCCCcccEEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHhCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999889999
Q ss_pred ccceEEeeeeeec
Q 027222 213 KSKVVISNSGEMA 225 (226)
Q Consensus 213 ~~~i~I~~cg~l~ 225 (226)
.++|+|.+||+|+
T Consensus 160 ~~~v~I~~~g~l~ 172 (172)
T 2cmt_A 160 KEPVIISRCGELI 172 (172)
T ss_dssp SSCEEEEEEEEEC
T ss_pred CCCEEEEEeEeEC
Confidence 9999999999985
No 9
>3pmp_A Cyclophilin A; peptidyl prolyl isomerase, isomerase-immunosuppressant compl; HET: BMT; 1.47A {Moniliophthora perniciosa} SCOP: b.62.1.1 PDB: 3o7t_A
Probab=100.00 E-value=3e-54 Score=346.53 Aligned_cols=162 Identities=60% Similarity=1.088 Sum_probs=155.4
Q ss_pred CcEEEEEEEECCEEeeEEEEEEecCCCchhHHHHHHhhcCCCCcccCCCCcc-ccCCEEEEeecCceEeeCCCCCCCCCC
Q 027222 56 THKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLY-YKGSSFHRIIPSFMIQGGDFTLGDGRG 134 (226)
Q Consensus 56 ~~~v~~~i~~~~~~~G~IvieL~~~~aP~~v~nF~~L~~g~~g~~~~~~~~~-Y~g~~f~Rv~~~~~iq~Gd~~~~~~~~ 134 (226)
+++||||+.+++++.|+|+||||++.||+||+||++||+|++| + |+|+.||||+|+|||||||+..+++.+
T Consensus 2 ~p~vf~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~L~~g~~g--------~~Y~g~~fhRvi~~f~iQgGd~~~~~g~g 73 (164)
T 3pmp_A 2 MANVFFNISINDKPEGRIVFKLYDEAVPKTAKNFRELATGQHG--------FGYKDSIFHRVIPQFMLQGGDFTRHNGTG 73 (164)
T ss_dssp CCCEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTS--------CSSTTCBEEEEETTTEEEECCTTTSSSSC
T ss_pred CCEEEEEEEECCEEeeEEEEEEeCCCCcHHHHHHHHHhcccCC--------CcccCCEEEEEECCCeEEeCCCCCCCCCC
Confidence 5799999999999999999999999999999999999987655 7 999999999999999999988788999
Q ss_pred CccccCCcccccccccccCCceEEEeeecCCCCCcceeEEEccCCCCCCCCccEEEEEEcCHHHHHHHHhCCCCCCCccc
Q 027222 135 GESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGEPKS 214 (226)
Q Consensus 135 ~~~~~~~~~~~e~~~~~h~~~G~l~~~~~~~~~~~sqF~I~l~~~~~Ld~~~~VFGrVi~G~~vl~~I~~~~~~~~~P~~ 214 (226)
+.++|+..+++|+..++|.++|+|+|+|++|++++|||||+++++|+||++|+|||||++|||||++|++.++++++|.+
T Consensus 74 g~si~g~~~~dE~~~l~h~~~G~lsma~~g~~t~~SQFfIt~~~~~~Ld~~~~vFG~Vv~G~~vv~~I~~~~~~~~~P~~ 153 (164)
T 3pmp_A 74 GKSIYGEKFADENFQVKHTKPGLLSMANAGANTNGSQFFITTVPTSWLDGKHVVFGEVIEGLDIVRKVEGKGSASGKTNA 153 (164)
T ss_dssp CCBTTBSCBCCCCCCSCCCSTTEEEECBSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTCCCSS
T ss_pred CcccCCccccccccccCcCCCcEEEEeeCCCCCcccEEEEECCCChhhCCCccEEEEEeCCHHHHHHHHhCCCCCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998999999
Q ss_pred ceEEeeeeeec
Q 027222 215 KVVISNSGEMA 225 (226)
Q Consensus 215 ~i~I~~cg~l~ 225 (226)
+|+|.+||+|.
T Consensus 154 ~v~I~~cg~l~ 164 (164)
T 3pmp_A 154 TIKITDCGTVA 164 (164)
T ss_dssp CEEEEEEEEC-
T ss_pred CEEEEeCeEEC
Confidence 99999999984
No 10
>2r99_A Peptidyl-prolyl CIS-trans isomerase E; CIS-trans isomerization, structural genomics consortium, SGC, alternative splicing, mRNA processing; 1.61A {Homo sapiens} SCOP: b.62.1.1 PDB: 3uch_A 1zmf_A
Probab=100.00 E-value=3.7e-54 Score=348.54 Aligned_cols=162 Identities=64% Similarity=1.113 Sum_probs=155.7
Q ss_pred CcEEEEEEEECCEEeeEEEEEEecCCCchhHHHHHHhhcCCCCcccCCCCcc-ccCCEEEEeecCceEeeCCCCCCCCCC
Q 027222 56 THKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLY-YKGSSFHRIIPSFMIQGGDFTLGDGRG 134 (226)
Q Consensus 56 ~~~v~~~i~~~~~~~G~IvieL~~~~aP~~v~nF~~L~~g~~g~~~~~~~~~-Y~g~~f~Rv~~~~~iq~Gd~~~~~~~~ 134 (226)
++++|||+.+++++.|+|+||||++.||+||+||++||++++| + |+|+.||||+|+|||||||+..+++.+
T Consensus 11 ~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g--------~~Y~g~~FhRvi~~f~iQgGd~~~~~g~g 82 (173)
T 2r99_A 11 NPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEKG--------FGFKGSSFHRIIPQFMCQGGDFTNHNGTG 82 (173)
T ss_dssp CCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTS--------CCSTTCBEEEEETTTEEEECCTTTSSSSC
T ss_pred CCEEEEEEEECCccceeEEEEECCCCCcHHHHHHHHHhcccCC--------ceecCCEEEEeeCCCEEEeCCcCCCCCCC
Confidence 6899999999999999999999999999999999999987654 6 999999999999999999998888999
Q ss_pred CccccCCcccccccccccCCceEEEeeecCCCCCcceeEEEccCCCCCCCCccEEEEEEcCHHHHHHHHhCCCCCCCccc
Q 027222 135 GESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGEPKS 214 (226)
Q Consensus 135 ~~~~~~~~~~~e~~~~~h~~~G~l~~~~~~~~~~~sqF~I~l~~~~~Ld~~~~VFGrVi~G~~vl~~I~~~~~~~~~P~~ 214 (226)
+.++|+..|++|++.++|+++|+|+|++++|++++|||||++.++|+||++|+|||||++|||||++|++.++++++|.+
T Consensus 83 g~si~g~~f~dE~~~l~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~~~~P~~ 162 (173)
T 2r99_A 83 GKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEAQGSKDGKPKQ 162 (173)
T ss_dssp CCBTTBSCBCCCCCCSCCCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTCCCSS
T ss_pred CCccCCCcccCcccCcccCCCcEEEEccCCCCCcccEEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHhCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988899999
Q ss_pred ceEEeeeeeec
Q 027222 215 KVVISNSGEMA 225 (226)
Q Consensus 215 ~i~I~~cg~l~ 225 (226)
+|+|.+||+|+
T Consensus 163 ~v~I~~cG~l~ 173 (173)
T 2r99_A 163 KVIIADCGEYV 173 (173)
T ss_dssp CEEEEEEEECC
T ss_pred CeEEEEeeeEC
Confidence 99999999985
No 11
>1mzw_A Cyclophilin H, U-snRNP-ASSOCIATED cyclophilin; cyclophilin, peptidyl-prolyl-CIS/trans isomerase, spliceosome, U4/U6-60K protein, WD protein; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1qoi_A
Probab=100.00 E-value=4.6e-54 Score=349.11 Aligned_cols=167 Identities=57% Similarity=1.013 Sum_probs=157.3
Q ss_pred CcEEEEEEEECCEEeeEEEEEEecCCCchhHHHHHHhhcCCCCcccCCCCccccCCEEEEeecCceEeeCCCCCCCCCCC
Q 027222 56 THKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGRGG 135 (226)
Q Consensus 56 ~~~v~~~i~~~~~~~G~IvieL~~~~aP~~v~nF~~L~~g~~g~~~~~~~~~Y~g~~f~Rv~~~~~iq~Gd~~~~~~~~~ 135 (226)
+++||||+.+++++.|+|+||||++.||+||+||++||+++.|. .|+..+|+|+.||||+|+|||||||+..+++.++
T Consensus 10 ~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~--~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G~gg 87 (177)
T 1mzw_A 10 NPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEFRK--DGVPIGYKGSTFHRVIKDFMIQGGDFVNGDGTGV 87 (177)
T ss_dssp CCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCEE--TTEECSSTTCBCCEEETTTEEEECCTTTSSSCCC
T ss_pred CCEEEEEEEECCeeceeEEEEEcCCCCcHHHHHHHHHHhcccCC--cCccceECCCEEEEEECCCEEEcCCcccCCCCCC
Confidence 68999999999999999999999999999999999999887543 3455679999999999999999999988889999
Q ss_pred ccccCCcccccccccccCCceEEEeeecCCCCCcceeEEEccCCCCCCCCccEEEEEEcCHHHHHHHHhCCC-CCCCccc
Q 027222 136 ESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGR-QSGEPKS 214 (226)
Q Consensus 136 ~~~~~~~~~~e~~~~~h~~~G~l~~~~~~~~~~~sqF~I~l~~~~~Ld~~~~VFGrVi~G~~vl~~I~~~~~-~~~~P~~ 214 (226)
.++|+..|++|++.++|+++|+|||++++|++++|||||+++++|+||++|+|||||++|||||++|++.++ ++++|.+
T Consensus 88 ~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~t~~~~~P~~ 167 (177)
T 1mzw_A 88 ASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGPNNKPKL 167 (177)
T ss_dssp CCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCGGGCBSS
T ss_pred CccCCCcccCcccccccCCCCEEEEccCCCCCcceEEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999886 5789999
Q ss_pred ceEEeeeeee
Q 027222 215 KVVISNSGEM 224 (226)
Q Consensus 215 ~i~I~~cg~l 224 (226)
+|+|.+||+|
T Consensus 168 ~v~I~~cG~l 177 (177)
T 1mzw_A 168 PVVISQCGEM 177 (177)
T ss_dssp CEEEEEEEEC
T ss_pred CEEEEeceeC
Confidence 9999999986
No 12
>2haq_A Cyclophilin; rotamase, proline, isomerase, CIS-trans, protozoa, KAla-AZAR.; 1.97A {Leishmania donovani} PDB: 3eov_A* 3bt8_A
Probab=100.00 E-value=6.3e-54 Score=346.42 Aligned_cols=163 Identities=65% Similarity=1.073 Sum_probs=154.6
Q ss_pred cccCcEEEEEEEECCEEeeEEEEEEecCCCchhHHHHHHhhcCCCCcccCCCCcc-ccCCEEEEeecCceEeeCCCCCCC
Q 027222 53 EKVTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLY-YKGSSFHRIIPSFMIQGGDFTLGD 131 (226)
Q Consensus 53 ~~~~~~v~~~i~~~~~~~G~IvieL~~~~aP~~v~nF~~L~~g~~g~~~~~~~~~-Y~g~~f~Rv~~~~~iq~Gd~~~~~ 131 (226)
|..++++|||+.+++++.|+|+||||++.||+||+||++||+|.+| | |+|+.||||+|+|||||||+..++
T Consensus 8 ~~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g--------~~Y~g~~FhRvi~~f~iQgGd~~~~~ 79 (172)
T 2haq_A 8 PEVTAKVYFDVMIDSEPLGRITIGLFGKDAPLTTENFRQLCTGEHG--------FGYKDSIFHRVIQNFMIQGGDFTNFD 79 (172)
T ss_dssp CCCCEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTS--------CCSTTCBCCEEETTTEEEECCTTTSS
T ss_pred CCCCCeEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHhccCCC--------cccCCCEEEEEECCCEEecCCccCCC
Confidence 5568999999999999999999999999999999999999987655 7 999999999999999999987788
Q ss_pred CCCCccccCCcccccccccccCCceEEEeeecCCCCCcceeEEEccCCCCCCCCccEEEEEEcCHHHHHHHHhCCCCC-C
Q 027222 132 GRGGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQS-G 210 (226)
Q Consensus 132 ~~~~~~~~~~~~~~e~~~~~h~~~G~l~~~~~~~~~~~sqF~I~l~~~~~Ld~~~~VFGrVi~G~~vl~~I~~~~~~~-~ 210 (226)
+.++.++|+..+++|+..++|. +|+||||+++|++++|||||+++++|+||++|+|||||++|||||++|++.+++. +
T Consensus 80 g~gg~si~g~~f~dE~~~l~h~-~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv~G~dvv~~I~~~~t~~~~ 158 (172)
T 2haq_A 80 GTGGKSIYGEKFADENLNVKHF-VGALSMANAGPNTNGSQFFITTAPTPWLDGRHVVFGKVLDGMDVVLRIEKTKTNSHD 158 (172)
T ss_dssp SSCCCCSSSSCBCCCCCCSCCC-TTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCGGG
T ss_pred CCCCccccCCcccCcCCCcccC-ceEEEEccCCCCCcccEEEEECCCCCccCCCEeEEEEEeCCHHHHHHHHhCCcCCCC
Confidence 9999999999999999999999 9999999999999999999999999999999999999999999999999988765 5
Q ss_pred CcccceEEeeeeee
Q 027222 211 EPKSKVVISNSGEM 224 (226)
Q Consensus 211 ~P~~~i~I~~cg~l 224 (226)
+|.++|+|.+||+|
T Consensus 159 ~P~~~v~I~~~g~l 172 (172)
T 2haq_A 159 RPVKPVKIVASGEL 172 (172)
T ss_dssp CBSSCEEEEEEEEC
T ss_pred cCCCCeEEEEeEEC
Confidence 99999999999986
No 13
>3rdd_A Peptidyl-prolyl CIS-trans isomerase A; beta barrel, cytosolic, inhibito isomerase-isomerase inhibitor complex; HET: EA4; 2.14A {Homo sapiens}
Probab=100.00 E-value=1.4e-53 Score=348.21 Aligned_cols=164 Identities=62% Similarity=1.100 Sum_probs=156.8
Q ss_pred ccCcEEEEEEEECCEEeeEEEEEEecCCCchhHHHHHHhhcCCCCcccCCCCcc-ccCCEEEEeecCceEeeCCCCCCCC
Q 027222 54 KVTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLY-YKGSSFHRIIPSFMIQGGDFTLGDG 132 (226)
Q Consensus 54 ~~~~~v~~~i~~~~~~~G~IvieL~~~~aP~~v~nF~~L~~g~~g~~~~~~~~~-Y~g~~f~Rv~~~~~iq~Gd~~~~~~ 132 (226)
..+++||||+++++++.|+|+||||++.||+||+||++||++++| + |+|+.||||+|+|||||||+..+++
T Consensus 20 ~~~p~v~~di~i~~~~~G~I~ieL~~~~aP~t~~NF~~L~~~~~g--------~~Y~g~~FhRvi~~f~iQgGd~~~~~g 91 (184)
T 3rdd_A 20 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKG--------FGYKGSCFHRIIPGFMCQGGDFTRHNG 91 (184)
T ss_dssp -CCCEEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTS--------CSSTTCBCCEEETTTEEEECCTTTSSS
T ss_pred CCCCEEEEEEeECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCcC--------cccCCCEEEEccCCcEEEeCCCCCCCC
Confidence 357899999999999999999999999999999999999987755 5 9999999999999999999888889
Q ss_pred CCCccccCCcccccccccccCCceEEEeeecCCCCCcceeEEEccCCCCCCCCccEEEEEEcCHHHHHHHHhCCCCCCCc
Q 027222 133 RGGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGEP 212 (226)
Q Consensus 133 ~~~~~~~~~~~~~e~~~~~h~~~G~l~~~~~~~~~~~sqF~I~l~~~~~Ld~~~~VFGrVi~G~~vl~~I~~~~~~~~~P 212 (226)
.++.++|+..+++|++.++|+++|+|+|++++|++++|||||+++++|+||++|+|||||++|||||++|++.++++++|
T Consensus 92 ~gg~si~g~~~~de~~~l~h~~~G~lsmA~~gp~s~gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~~g~P 171 (184)
T 3rdd_A 92 TGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKT 171 (184)
T ss_dssp SCCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTSCC
T ss_pred CCCcccCCCcccCcccccccCCCcEEEEEeCCCCCcccEEEEEeCCchhhCCCceEEEEEecCHHHHHHHHhcCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceEEeeeeeec
Q 027222 213 KSKVVISNSGEMA 225 (226)
Q Consensus 213 ~~~i~I~~cg~l~ 225 (226)
.++|+|.+||+|+
T Consensus 172 ~~~v~I~~cG~l~ 184 (184)
T 3rdd_A 172 SKKITIADCGQLE 184 (184)
T ss_dssp SSCEEEEEEEECC
T ss_pred cCCeEEEeCeEEC
Confidence 9999999999985
No 14
>3ich_A Peptidyl-prolyl CIS-trans isomerase B; beta sandwich, cyclosporin, endoplasmic reticulum, glycoprot isomerase, rotamase; 1.20A {Homo sapiens} PDB: 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=2.1e-53 Score=348.04 Aligned_cols=167 Identities=66% Similarity=1.127 Sum_probs=157.4
Q ss_pred cccccCcEEEEEEEECCEEeeEEEEEEecCCCchhHHHHHHhhcCCCCcccCCCCcc-ccCCEEEEeecCceEeeCCCCC
Q 027222 51 ELEKVTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLY-YKGSSFHRIIPSFMIQGGDFTL 129 (226)
Q Consensus 51 ~~~~~~~~v~~~i~~~~~~~G~IvieL~~~~aP~~v~nF~~L~~g~~g~~~~~~~~~-Y~g~~f~Rv~~~~~iq~Gd~~~ 129 (226)
..|.+++++|||+.+++++.|+|+||||++.||+||+||++||+|++| | |+|+.||||+|+|||||||+..
T Consensus 10 ~~p~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g--------~~Y~g~~FhRvi~~f~iQgGd~~~ 81 (188)
T 3ich_A 10 KGPKVTVKVYFDLRIGDEDVGRVIFGLFGKTVPKTVDNFVALATGEKG--------FGYKNSKFHRVIKDFMIQGGDFTR 81 (188)
T ss_dssp CSCEEEEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTS--------CSSTTCBCCEEETTTEEEECCTTT
T ss_pred CCCCcCCeEEEEEEECCEeceeEEEEEcCCCCcHHHHHHHHHhcccCC--------ccccCCEEEEEECCCEEEcCCccC
Confidence 346778999999999999999999999999999999999999987655 7 9999999999999999999877
Q ss_pred CCCCCCccccCCcccccccccccCCceEEEeeecCCCCCcceeEEEccCCCCCCCCccEEEEEEcCHHHHHHHHhCCCCC
Q 027222 130 GDGRGGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQS 209 (226)
Q Consensus 130 ~~~~~~~~~~~~~~~~e~~~~~h~~~G~l~~~~~~~~~~~sqF~I~l~~~~~Ld~~~~VFGrVi~G~~vl~~I~~~~~~~ 209 (226)
+++.++.++|+..+++|+..++|+++|+|+|+|++|++++|||||+++++|+||++|+|||||++|||||++|++.+++.
T Consensus 82 ~~g~gg~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~~ 161 (188)
T 3ich_A 82 GDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVESTKTDS 161 (188)
T ss_dssp SSSSCCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCT
T ss_pred CCCCCCccccCCcccccccCcccCCCeEEEEccCCCCCcccEEEEECCCCcccCCCeeEEEEEeCCHHHHHHHHhCCcCC
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999988664
Q ss_pred -CCcccceEEeeeeeec
Q 027222 210 -GEPKSKVVISNSGEMA 225 (226)
Q Consensus 210 -~~P~~~i~I~~cg~l~ 225 (226)
++|.++|+|.+||+|+
T Consensus 162 ~~~P~~~v~I~~~~~l~ 178 (188)
T 3ich_A 162 RDKPLKDVIIADCGKIE 178 (188)
T ss_dssp TSCBSSCEEEEEEEEEE
T ss_pred CCeECCCEEEEEeEEEe
Confidence 5999999999999983
No 15
>4fru_A Cyclophilin B, peptidyl-prolyl CIS-trans isomerase; cyclophilin-type ppiase, peptidyl-prolyl CIS-trans isomerase chaperone, foldase; HET: ME2 PEG; 1.10A {Equus caballus} PDB: 4frv_A* 3ich_A 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=4.2e-53 Score=345.96 Aligned_cols=167 Identities=66% Similarity=1.103 Sum_probs=158.2
Q ss_pred ccccCcEEEEEEEECCEEeeEEEEEEecCCCchhHHHHHHhhcCCCCcccCCCCccccCCEEEEeecCceEeeCCCCCCC
Q 027222 52 LEKVTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGD 131 (226)
Q Consensus 52 ~~~~~~~v~~~i~~~~~~~G~IvieL~~~~aP~~v~nF~~L~~g~~g~~~~~~~~~Y~g~~f~Rv~~~~~iq~Gd~~~~~ 131 (226)
-|+++++||||+++++++.|+|+||||++.||+||+||++||++++| .+|+|+.||||+|+|||||||+..++
T Consensus 8 ~p~~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g-------~~Y~g~~FhRvi~~f~iQgGd~~~~~ 80 (185)
T 4fru_A 8 GPKVTVKVYFDLRIGDEDIGRVVIGLFGKTVPKTVDNFVALATGEKG-------FGYKDSKFHRVIKDFMIQGGDFTRGD 80 (185)
T ss_dssp EEEEEEEEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTS-------CCSTTCBCCEEETTTEEEECCTTTSS
T ss_pred CCCcCcEEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHHhcCCC-------CeEcCCEEEEeeCCCeEEECCCCCCC
Confidence 47789999999999999999999999999999999999999987643 16999999999999999999999889
Q ss_pred CCCCccccCCcccccccccccCCceEEEeeecCCCCCcceeEEEccCCCCCCCCccEEEEEEcCHHHHHHHHhCCCC-CC
Q 027222 132 GRGGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQ-SG 210 (226)
Q Consensus 132 ~~~~~~~~~~~~~~e~~~~~h~~~G~l~~~~~~~~~~~sqF~I~l~~~~~Ld~~~~VFGrVi~G~~vl~~I~~~~~~-~~ 210 (226)
+.++.++|+..+++|+..++|+++|+|+|+|++|++++|||||+++++|+||++|+|||||++|||||++|++.+++ ++
T Consensus 81 g~gg~si~g~~f~de~~~~~h~~~G~lsma~~gp~t~~SQFfI~~~~~~~Ld~~~~vFG~Vv~G~dvv~~I~~~~t~~~~ 160 (185)
T 4fru_A 81 GTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVETTKTDGRD 160 (185)
T ss_dssp SSCCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTS
T ss_pred CCCCccccCCccCccccccCcCCCeEEEEeeCCCCCcceEEEEEeCCCcccCCCccEEEEEeCCHHHHHHHHhCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998865 58
Q ss_pred CcccceEEeeeeeec
Q 027222 211 EPKSKVVISNSGEMA 225 (226)
Q Consensus 211 ~P~~~i~I~~cg~l~ 225 (226)
+|.++|+|.+||+|+
T Consensus 161 ~P~~~v~I~~~g~l~ 175 (185)
T 4fru_A 161 KPLKDVTIADCGKIE 175 (185)
T ss_dssp CBSSCEEEEEEEEEE
T ss_pred cCCCCEEEEEceEEe
Confidence 999999999999985
No 16
>3k2c_A Peptidyl-prolyl CIS-trans isomerase; ssgcid, NIH, niaid, SBRI, UW, decode, cytoplasm, rotamase, structural genomics; HET: PG5; 1.95A {Encephalitozoon cuniculi}
Probab=100.00 E-value=1.2e-52 Score=344.90 Aligned_cols=163 Identities=57% Similarity=0.971 Sum_probs=156.3
Q ss_pred cCcEEEEEEEECCEEeeEEEEEEecCCCchhHHHHHHhhcCCCCcccCCCCcc-ccCCEEEEeecCceEeeCCCCCCCCC
Q 027222 55 VTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLY-YKGSSFHRIIPSFMIQGGDFTLGDGR 133 (226)
Q Consensus 55 ~~~~v~~~i~~~~~~~G~IvieL~~~~aP~~v~nF~~L~~g~~g~~~~~~~~~-Y~g~~f~Rv~~~~~iq~Gd~~~~~~~ 133 (226)
.+++||||+.+++++.|+|+||||++.||+||+||++||++++| + |+|+.||||+|+|||||||+..+++.
T Consensus 26 ~~p~v~~di~i~~t~~G~I~ieL~~~~aP~tv~NF~~L~~g~~g--------~~Y~g~~FhRvi~~f~iQgGd~~~~~g~ 97 (193)
T 3k2c_A 26 ASGNVYFDVYANEESLGRIVMKLEDDIVPKTAKNFRTLCERPKG--------EGYKGSTFHRIIPGFMVQGGDYTAHNGT 97 (193)
T ss_dssp CTTCEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHSCTT--------SSSTTCBEEEEETTTEEEECCTTTSSSS
T ss_pred CCCEEEEEEeECCEEeeEEEEEEcCCCChHHHHHHHHHhccccC--------CcccCCEEEEEeCCCEEEeCCCCCCCCc
Confidence 36899999999999999999999999999999999999987655 5 99999999999999999998888899
Q ss_pred CCccccCCcccccccccccCCceEEEeeecCCCCCcceeEEEccCCCCCCCCccEEEEEEcCHHHHHHHHhCCCCCCCcc
Q 027222 134 GGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGEPK 213 (226)
Q Consensus 134 ~~~~~~~~~~~~e~~~~~h~~~G~l~~~~~~~~~~~sqF~I~l~~~~~Ld~~~~VFGrVi~G~~vl~~I~~~~~~~~~P~ 213 (226)
++.++|+..+++|++.++|+++|+|+|++.+|++++|||||+++++|+||++|+|||||++|||||++|++.++++++|.
T Consensus 98 gg~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~t~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~g~P~ 177 (193)
T 3k2c_A 98 GGRSIYGEKFPDENFELKHTKEGILSMANCGAHTNGSQFFITLGKTQWLDEKHVVFGEVVEGMDVVHKIAKYGSESGQVK 177 (193)
T ss_dssp CCCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTCCCC
T ss_pred CCcccCCCcccccccccccCCCcEEEEEeCCCCCCccEEEEECCCCcccCCCccEEEEEeCCHHHHHHHHhcCCCCCcCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998899999
Q ss_pred --cceEEeeeeeec
Q 027222 214 --SKVVISNSGEMA 225 (226)
Q Consensus 214 --~~i~I~~cg~l~ 225 (226)
++|+|.+||+|+
T Consensus 178 ~~~~v~I~~cG~l~ 191 (193)
T 3k2c_A 178 KGYRIEIRDCGVLG 191 (193)
T ss_dssp TTCCEEEEEEEECC
T ss_pred cCccEEEEEceEeC
Confidence 999999999986
No 17
>1z81_A Cyclophilin; structural genomics, structural genomics consortium, SGC, isomerase; 2.80A {Plasmodium yoelii yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=3.2e-52 Score=349.37 Aligned_cols=168 Identities=47% Similarity=0.851 Sum_probs=158.6
Q ss_pred cCcEEEEEEEECCEEeeEEEEEEecCCCchhHHHHHHhhcCCCCcccCCCCccccCCEEEEeecCceEeeCCCCCCCCCC
Q 027222 55 VTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGRG 134 (226)
Q Consensus 55 ~~~~v~~~i~~~~~~~G~IvieL~~~~aP~~v~nF~~L~~g~~g~~~~~~~~~Y~g~~f~Rv~~~~~iq~Gd~~~~~~~~ 134 (226)
-+++||||+++++++.|+|+||||++.||+||+||++||++++|.+ |+..+|+|+.||||+|+|||||||+..+++.+
T Consensus 58 ~~~~V~~disi~~t~~G~I~ieL~~d~aP~tv~NF~~L~~~~~g~~--g~~~~Y~gt~FHRVi~~FmiQgGD~~~g~G~G 135 (229)
T 1z81_A 58 SNPVVFMDINLGNNFLGKFKFELFQNIVPKTSENFRQFCTGEYKVN--NLPVGYKNTIFHRVIKEFMIQGGDFINHNGSG 135 (229)
T ss_dssp TCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCBSS--SSBCSSTTEECCEEETTTEEEECCTTTSSSCC
T ss_pred CCcEEEEEEeECCeecccEEEEEcCCCCCHHHHHHHHHhhCCCCCc--CCCceECCCEEEEEeCCCEEEcCCCcCCCCCC
Confidence 4689999999999999999999999999999999999999876543 56678999999999999999999998888999
Q ss_pred CccccCCcccccccccccCCceEEEeeecCCCCCcceeEEEccCCCCCCCCccEEEEEE--cCHHHHHHHHhCCCCC--C
Q 027222 135 GESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVL--SGMDVVRKIEAEGRQS--G 210 (226)
Q Consensus 135 ~~~~~~~~~~~e~~~~~h~~~G~l~~~~~~~~~~~sqF~I~l~~~~~Ld~~~~VFGrVi--~G~~vl~~I~~~~~~~--~ 210 (226)
+.++|+..|++|++.++|+++|+|+|||++|++++|||||++.++|+||++|+|||||+ +|||||++|++.+++. +
T Consensus 136 g~siyg~~f~dE~~~l~h~~~G~LsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~~eGmdVv~~I~~~~t~~~~~ 215 (229)
T 1z81_A 136 SLSIYGEKFDDENFDIKHDKEGLLSMANSGPNTNGCQFFITTKKCEWLDGKNVVFGRIIDNDSLLLLKKIENVSVTPYIY 215 (229)
T ss_dssp CCBTTBSCCCCCCCCSCCCSTTEEEECCSSSSCCCSCEEEESSCCGGGBTTBCEEEEECSHHHHHHHHHHHHSCBCTTTC
T ss_pred CCccCCCcccccccccccCCCcEEEeccCCCCCcccEEEEECCCCcccCCCeeEEEEEEecCcHHHHHHHHhCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999 9999999999988765 8
Q ss_pred CcccceEEeeeeee
Q 027222 211 EPKSKVVISNSGEM 224 (226)
Q Consensus 211 ~P~~~i~I~~cg~l 224 (226)
+|.++|+|.+||+|
T Consensus 216 ~P~~~V~I~~cG~l 229 (229)
T 1z81_A 216 KPKIPINVVECGEL 229 (229)
T ss_dssp CBSSCEEEEEEEEC
T ss_pred CCCCCeEEEeCeeC
Confidence 99999999999986
No 18
>2c3b_A Ppiase, cyclophilin; isomerase, 3D domain swapping, misfolding, Asp F 11, allergen, rotamase; 1.85A {Aspergillus fumigatus} SCOP: b.62.1.1
Probab=100.00 E-value=1.8e-52 Score=338.28 Aligned_cols=161 Identities=60% Similarity=1.060 Sum_probs=122.1
Q ss_pred cCcEEEEEEEEC--CE---EeeEEEEEEecCCCchhHHHHHHhhcCCCCcccCCCCcc-ccCCEEEEeecCceEeeCCCC
Q 027222 55 VTHKVYFDIEVG--GK---PIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLY-YKGSSFHRIIPSFMIQGGDFT 128 (226)
Q Consensus 55 ~~~~v~~~i~~~--~~---~~G~IvieL~~~~aP~~v~nF~~L~~g~~g~~~~~~~~~-Y~g~~f~Rv~~~~~iq~Gd~~ 128 (226)
++ +|||||.++ +. +.|+|+||||++.||+||+||++||++.+| + |+|+.||||+|+|||||||+.
T Consensus 2 it-~vf~di~i~~~~~~~T~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g--------~~Y~g~~fhRvi~~f~iQgGd~~ 72 (172)
T 2c3b_A 2 MS-QVFFDVEYAPVGTAETKVGRIVFNLFDKDVPKTAKNFRELCKRPAG--------EGYRESTFHRIIPNFMIQGGDFT 72 (172)
T ss_dssp CC-CEEEEEEECCTTCSCCEEEEEEEEECTTTSHHHHHHHHHHHHSCTT--------TSSTTCBCCEEETTTEEEECC--
T ss_pred ce-EEEEEEEeCCCCceecccccEEEEEcCCCCcHHHHHHHHHhccCCC--------cccCCCEEEEEeCCCEEEeCCcC
Confidence 46 899999998 64 459999999999999999999999987655 6 999999999999999999977
Q ss_pred CCCCCCCccccCCcccccccccccCCceEEEeeecCCCCCcceeEEEccCCCCCCCCccEEEEEEc--CHHHHHHHHhCC
Q 027222 129 LGDGRGGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLS--GMDVVRKIEAEG 206 (226)
Q Consensus 129 ~~~~~~~~~~~~~~~~~e~~~~~h~~~G~l~~~~~~~~~~~sqF~I~l~~~~~Ld~~~~VFGrVi~--G~~vl~~I~~~~ 206 (226)
.+++.+++++|+..+++|+..++|+++|+|+|++++|++++|||||+++++|+||++|+|||||++ |||||++|++.+
T Consensus 73 ~~~g~gg~si~g~~f~dE~~~~~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tvFG~Vv~~~G~dvv~~I~~~~ 152 (172)
T 2c3b_A 73 RGNGTGGRSIYGDKFADENFSRKHDKKGILSMANAGPNTNGSQFFITTAVTSWLDGKHVVFGEVADEKSYSVVKEIEALG 152 (172)
T ss_dssp --------------------CHHHHHTCEEEEC---------CEEEECSCCTTCCSCCEEEEEECSHHHHHHHHHHHTTC
T ss_pred CCCCCCCcccCCCcccCcccccccCCCeEEEEeeCCCCCcccEEEEECCCCCccCCCeeEEEEEEecCCHHHHHHHHhCC
Confidence 688999999999999999999999999999999999999999999999999999999999999999 999999999988
Q ss_pred CCCC--CcccceEEeeeeee
Q 027222 207 RQSG--EPKSKVVISNSGEM 224 (226)
Q Consensus 207 ~~~~--~P~~~i~I~~cg~l 224 (226)
++.+ +|.++|+|.+||+|
T Consensus 153 t~~~~~~P~~~v~I~~cG~l 172 (172)
T 2c3b_A 153 SSSGSVRSNTRPKIVNCGEL 172 (172)
T ss_dssp CTTSCCCSSSCCEEEEEEEC
T ss_pred CCCCCccCCCCeEEEeCeeC
Confidence 7765 99999999999986
No 19
>2ose_A Probable peptidyl-prolyl CIS-trans isomerase; cyclophilin; 2.04A {Mimivirus}
Probab=100.00 E-value=1.1e-49 Score=335.92 Aligned_cols=169 Identities=30% Similarity=0.490 Sum_probs=146.3
Q ss_pred cCcEEEEEEEECCEEeeEEEEEEecCCCchhHHHHHHhhcCCCC------cccC----CCCccccCCEEEEeecCceEee
Q 027222 55 VTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKG------IGKS----GKPLYYKGSSFHRIIPSFMIQG 124 (226)
Q Consensus 55 ~~~~v~~~i~~~~~~~G~IvieL~~~~aP~~v~nF~~L~~g~~g------~~~~----~~~~~Y~g~~f~Rv~~~~~iq~ 124 (226)
.++++|||+.+++++.|+|+||||++.||+||+||++||++++. .|+. |+...|+|+.||||+|+|||||
T Consensus 13 ~~p~v~~di~i~~t~~G~I~ieL~~d~aP~tv~NF~~L~~g~~~~~~p~~~~~~~~~~G~~~~Y~gt~FHRVi~~FmiQg 92 (234)
T 2ose_A 13 KNPRVYMDIVLNNEIIGRLQIKLFRDAFPAGVENFVQLTNGKTYRVNSNGTGKYKYNRHINRTYEGCKFHNVLHNNYIVS 92 (234)
T ss_dssp SSCEEEEEEEETTEEEEEEEEEECGGGCHHHHHHHHHHHHTCCCC---------------CCCSTTCBCCEEETTTEEEE
T ss_pred CCCEEEEEEEECCcccceEEEEEcCCCCcHHHHHHHHHhcCCccccccccccccccccCCceEECCcEEEEEECCCEEEc
Confidence 46899999999999999999999999999999999999997621 1111 1222399999999999999999
Q ss_pred CCCCCCCCCCCccccCCc-----ccccccccccCCceEEEeee----cCCCCCcceeEEEccC------CCCCCCCccEE
Q 027222 125 GDFTLGDGRGGESIFGES-----FADENFKLKHTGPGVLSMAN----AGPDTNGSQFFITTVI------TSWLDGRHVVF 189 (226)
Q Consensus 125 Gd~~~~~~~~~~~~~~~~-----~~~e~~~~~h~~~G~l~~~~----~~~~~~~sqF~I~l~~------~~~Ld~~~~VF 189 (226)
||+..++|.|+.++|+.. |+ ++.++|.++|+||||| ++|++++|||||++++ +||||++|+||
T Consensus 93 Gd~~~g~G~Gg~siyg~~~~p~~f~--~~~l~h~~~G~lsMAn~~~~~gpntngSQFFIt~~~~~~~~g~p~LDg~~tVF 170 (234)
T 2ose_A 93 GDIYNSNGSSAGTVYCDEPIPPVFG--DYFYPHESKGLLSLVPYTDESGNRYYDSTFMITLDDIRPSNVLDELDRDQVVI 170 (234)
T ss_dssp CCCC----CCCCCTTTTCCBCCCCC--SCCCCSCSTTEEEECCEECTTSCEEBCSCEEEESSCCCTTSSGGGSCTTSEEE
T ss_pred CCccCCCCCCCccccCCccCccccc--CcCccCCCCCEEEEecccccCCCCCccceEEEEecCccccCCCcccCCCeeEE
Confidence 998778899999999887 66 5689999999999999 8999999999999999 99999999999
Q ss_pred EEEEcCHHHHHHHHhCCCCC-CCcccceEEeeeeeec
Q 027222 190 GKVLSGMDVVRKIEAEGRQS-GEPKSKVVISNSGEMA 225 (226)
Q Consensus 190 GrVi~G~~vl~~I~~~~~~~-~~P~~~i~I~~cg~l~ 225 (226)
|||++|||||++|++.+++. ++|.++|+|.+||++.
T Consensus 171 G~Vv~GmdVv~~I~~~~t~~~~~P~~~V~I~~~~~l~ 207 (234)
T 2ose_A 171 GQVYGGLDVLDKINSMIKPYAGRKYPTFSIGKCGAYL 207 (234)
T ss_dssp EEEEECHHHHHHHHHHTCCCTTCCCCCEEEEEEEECC
T ss_pred EEEeCCHHHHHHHHhCCcCCCCCccCCEEEEEEEEec
Confidence 99999999999999987654 8999999999999985
No 20
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=100.00 E-value=2.5e-49 Score=354.13 Aligned_cols=170 Identities=59% Similarity=1.034 Sum_probs=162.0
Q ss_pred CcEEEEEEEECCEEeeEEEEEEecCCCchhHHHHHHhhcCCCCcccC-CCCccccCCEEEEeecCceEeeCCCCCCCCCC
Q 027222 56 THKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKS-GKPLYYKGSSFHRIIPSFMIQGGDFTLGDGRG 134 (226)
Q Consensus 56 ~~~v~~~i~~~~~~~G~IvieL~~~~aP~~v~nF~~L~~g~~g~~~~-~~~~~Y~g~~f~Rv~~~~~iq~Gd~~~~~~~~ 134 (226)
+++||||+++++++.|+|+||||++.||+||+||++||++++|.|.. |+..+|+|+.||||+|+|||||||+..++|.|
T Consensus 15 ~~~v~~~~~~~~~~~G~i~~~l~~~~~P~t~~nf~~l~~~~~~~~~~~g~~~~y~~~~fhrv~~~f~~q~Gd~~~~~g~g 94 (370)
T 1ihg_A 15 NPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTG 94 (370)
T ss_dssp SCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTSSBSCCTTCBEEEEETTTEEEECCTTTSSSSC
T ss_pred CCeEEEEEEECCEecccEEEEEcCCCCchHHHHHHHHcCCCcCcCccCCCcceeCCcEeEEEECCcEEECCCCCCCCCCC
Confidence 68999999999999999999999999999999999999998887654 56678999999999999999999999889999
Q ss_pred CccccCCcccccccccccCCceEEEeeecCCCCCcceeEEEccCCCCCCCCccEEEEEEcCHHHHHHHHhCCCCCCCccc
Q 027222 135 GESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGEPKS 214 (226)
Q Consensus 135 ~~~~~~~~~~~e~~~~~h~~~G~l~~~~~~~~~~~sqF~I~l~~~~~Ld~~~~VFGrVi~G~~vl~~I~~~~~~~~~P~~ 214 (226)
+.++|+..|++|++.++|+++|+|+|++++|++++|||||+++++||||++|+|||+|++||++|++|++.+++.++|.+
T Consensus 95 ~~~~~~~~~~~e~~~~~~~~~g~l~ma~~~~~~~~sqffi~~~~~~~ld~~~~vfG~v~~g~~v~~~i~~~~~~~~~P~~ 174 (370)
T 1ihg_A 95 GESIYGEKFEDENFHYKHDKEGLLSMANAGSNTNGSQFFITTVPTPHLDGKHVVFGQVIKGMGVAKILENVEVKGEKPAK 174 (370)
T ss_dssp CCBTTBSCBCCCCCCBCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCEETTEESS
T ss_pred CCCCCCCCcCCCcCCcCCCCCeEEEEeeCCCCCCCceEEEeCCCCcccCCCceEEEEEecCHHHHHHHHcCCCCCCccce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998877799999
Q ss_pred ceEEeeeeeec
Q 027222 215 KVVISNSGEMA 225 (226)
Q Consensus 215 ~i~I~~cg~l~ 225 (226)
+|+|.+||++.
T Consensus 175 ~v~I~~~g~l~ 185 (370)
T 1ihg_A 175 LCVIAECGELK 185 (370)
T ss_dssp CEEEEEEEEEC
T ss_pred eEEEEEEEEec
Confidence 99999999984
No 21
>2fu0_A Cyclophilin, putative; PFE0505W, cyclosporin-binding domain, structura genomics, structural genomics consortium, SGC, unknown FUNC; 1.80A {Plasmodium falciparum} SCOP: b.62.1.1
Probab=100.00 E-value=3.7e-48 Score=309.71 Aligned_cols=144 Identities=49% Similarity=0.780 Sum_probs=136.1
Q ss_pred eeEEEEEEecCCCchhHHHHHHhhcCCCCcccCCCCccccCCEEEEeecCceEeeCCCCCCCCCCCccccCCccccccc-
Q 027222 70 IGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGRGGESIFGESFADENF- 148 (226)
Q Consensus 70 ~G~IvieL~~~~aP~~v~nF~~L~~g~~g~~~~~~~~~Y~g~~f~Rv~~~~~iq~Gd~~~~~~~~~~~~~~~~~~~e~~- 148 (226)
.|+|+||||++.||+||+||++||+.+ ||+|+.||||+|+|||||||+. +++.++.++|+..+++|..
T Consensus 14 ~G~i~ieL~~~~aP~t~~NF~~L~~~g----------~Y~g~~fhRvi~~f~iQgGd~~-~~g~gg~si~g~~~~dE~~~ 82 (160)
T 2fu0_A 14 MGDIHISLFYKECKKTVQNFSVHSING----------YYNNCIFHRVIKHFMVQTGDPS-GDGTGGESIWGNEFEDEFFD 82 (160)
T ss_dssp TEEEEEEECTTTCHHHHHHHHHHHHTT----------TTTTCBCCEEETTTEEEECCTT-SSSSCCCCTTSSCBCCCCBT
T ss_pred CccEEEEEeCCCChHHHHHHHHHhccC----------ccCCCEEEEEECCCEEEeCCcC-CCCCCCCcccCCCccccccC
Confidence 999999999999999999999999644 9999999999999999999986 6788999999999999987
Q ss_pred ccccCCceEEEeeecCCCCCcceeEEEccCCCCCCCCccEEEEEEcCHHHHHHHHhCCCC-CCCcccceEEeeeeee
Q 027222 149 KLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQ-SGEPKSKVVISNSGEM 224 (226)
Q Consensus 149 ~~~h~~~G~l~~~~~~~~~~~sqF~I~l~~~~~Ld~~~~VFGrVi~G~~vl~~I~~~~~~-~~~P~~~i~I~~cg~l 224 (226)
.++|+++|+|+|++++|++++|||||++.++|+||++|+|||||++|||+|++|++.+++ +++|.++|+|.+|.++
T Consensus 83 ~l~h~~~G~lsmA~~gp~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v~I~~~~v~ 159 (160)
T 2fu0_A 83 HLNHSKPFMVSMANCGPNTNGSQFFITTVPCPWLDFKHTVFGKVTQGSKIVLDIEKVRTDKRDKPLEDIKILNIKIN 159 (160)
T ss_dssp TBCSSSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCCBEEEEEEC
T ss_pred CcccCCceEEEEecCCCCCcccEEEEECCCCCccCCCcEEEEEEEcCHHHHHHHHhCCcCCCCCcCCCeEEEEEEEe
Confidence 589999999999999999999999999999999999999999999999999999998865 6899999999999876
No 22
>1zkc_A Peptidyl-prolyl CIS-trans isomerase like 2; CIS-trans isomerization, peptidylprolyl isomerase, protein- folding, structural genomics consortium; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=9.3e-48 Score=316.06 Aligned_cols=156 Identities=43% Similarity=0.759 Sum_probs=143.5
Q ss_pred CcEEEEEEEECCEEeeEEEEEEecCCCchhHHHHHHhhcCCCCcccCCCCccccCCEEEEeecCceEeeCCCCCCCCCCC
Q 027222 56 THKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGRGG 135 (226)
Q Consensus 56 ~~~v~~~i~~~~~~~G~IvieL~~~~aP~~v~nF~~L~~g~~g~~~~~~~~~Y~g~~f~Rv~~~~~iq~Gd~~~~~~~~~ 135 (226)
....++.+.++ .|+|+||||++.||+||+||++||+.+ ||+|+.||||+|+|||||||+. +++.|+
T Consensus 17 ~~~~~v~l~T~---~G~I~ieL~~~~aP~tv~NF~~L~~~g----------~Ydg~~FhRVi~~f~iQgGd~~-~~g~Gg 82 (197)
T 1zkc_A 17 RGSGYVRLHTN---KGDLNLELHCDLTPKTCENFIRLCKKH----------YYDGTIFHRSIRNFVIQGGDPT-GTGTGG 82 (197)
T ss_dssp CSCEEEEEEET---TEEEEEEECTTTSHHHHHHHHHHHHTT----------TTTTEEEEEEETTTEEEECCTT-SSSSCC
T ss_pred CCCcEEEEEeC---CccEEEEEcCCCCcHHHHHHHHHHhcC----------CCCCCEEEEEeCCCEEEcCCCC-CCCCCC
Confidence 34556666655 999999999999999999999999643 9999999999999999999987 778899
Q ss_pred ccccCCccccc-ccccccCCceEEEeeecCCCCCcceeEEEccCCCCCCCCccEEEEEEcCHHHHHHHHhCCCCC--CCc
Q 027222 136 ESIFGESFADE-NFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQS--GEP 212 (226)
Q Consensus 136 ~~~~~~~~~~e-~~~~~h~~~G~l~~~~~~~~~~~sqF~I~l~~~~~Ld~~~~VFGrVi~G~~vl~~I~~~~~~~--~~P 212 (226)
.++|+..+++| +..++|+++|+|+|++++|++++|||||+++++|+||++|+|||||++|||||++|++.+++. ++|
T Consensus 83 ~si~g~~f~dE~~~~l~h~~~G~lsMAn~gp~sngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~~P 162 (197)
T 1zkc_A 83 ESYWGKPFKDEFRPNLSHTGRGILSMANSGPNSNRSQFFITFRSCAYLDKKHTIFGRVVGGFDVLTAMENVESDPKTDRP 162 (197)
T ss_dssp CBTTBSCBCCCCCTTCCSCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHSCBCTTTCCB
T ss_pred CccCCCccccccCcCcCCCCceEEEEecCCCCCcccEEEEEcCCCCccCCCccEEEEEEcCHHHHHHHHcCCCCCCCCCc
Confidence 99999999999 578899999999999999999999999999999999999999999999999999999988664 899
Q ss_pred ccceEEeeeeeec
Q 027222 213 KSKVVISNSGEMA 225 (226)
Q Consensus 213 ~~~i~I~~cg~l~ 225 (226)
.++|+|.+|+++.
T Consensus 163 ~~~i~I~~~~v~~ 175 (197)
T 1zkc_A 163 KEEIRIDATTVFV 175 (197)
T ss_dssp SSCCEEEEEEEEE
T ss_pred CCCeEEEEEEEEc
Confidence 9999999999985
No 23
>2x7k_A Peptidyl-prolyl CIS-trans isomerase-like 1; isomerase-immunosuppressant complex, immunosuppressant; HET: MLE MVA BMT ABA SAR; 1.15A {Homo sapiens} PDB: 1xwn_A
Probab=100.00 E-value=5e-48 Score=310.64 Aligned_cols=153 Identities=50% Similarity=0.861 Sum_probs=141.0
Q ss_pred CcEEEEEEEECCEEeeEEEEEEecCCCchhHHHHHHhhcCCCCcccCCCCccccCCEEEEeecCceEeeCCCCCCCCCCC
Q 027222 56 THKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGRGG 135 (226)
Q Consensus 56 ~~~v~~~i~~~~~~~G~IvieL~~~~aP~~v~nF~~L~~g~~g~~~~~~~~~Y~g~~f~Rv~~~~~iq~Gd~~~~~~~~~ 135 (226)
+..|.++.. .|+|+||||++.||+||+||++||+.+ ||+|+.||||+|+|||||||+. +++.++
T Consensus 11 ~~~v~l~t~-----~G~i~ieL~~~~aP~t~~NF~~L~~~g----------~Y~g~~fhRvi~~f~iQgGd~~-~~g~gg 74 (166)
T 2x7k_A 11 PPNVYLETS-----MGIIVLELYWKHAPKTCKNFAELARRG----------YYNGTKFHRIIKDFMIQGGDPT-GTGRGG 74 (166)
T ss_dssp CSEEEEEET-----TEEEEEEECTTTCHHHHHHHHHHHHHT----------TTTTEECCEEETTTEEEECCTT-SSSSCC
T ss_pred CCEEEEEeC-----CCcEEEEEccCCCCHHHHHHHHHHhcC----------CCCCCEEEEEECCCEEEcCCCC-CCCCCC
Confidence 356666654 999999999999999999999999543 9999999999999999999987 778889
Q ss_pred ccccCCcccccc-cccccCCceEEEeeecCCCCCcceeEEEccCCCCCCCCccEEEEEEcCHHHHHHHHhCCCCC-CCcc
Q 027222 136 ESIFGESFADEN-FKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQS-GEPK 213 (226)
Q Consensus 136 ~~~~~~~~~~e~-~~~~h~~~G~l~~~~~~~~~~~sqF~I~l~~~~~Ld~~~~VFGrVi~G~~vl~~I~~~~~~~-~~P~ 213 (226)
.++|+..+++|. ..++|.++|+|+|++++|++++|||||+++++|+||++|+|||||++|||+|++|++.+++. ++|.
T Consensus 75 ~si~g~~~~dE~~~~l~h~~~G~lsmAn~gp~s~gSQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~t~~~~~P~ 154 (166)
T 2x7k_A 75 ASIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDRPV 154 (166)
T ss_dssp CCTTSSCBCCCCCTTSCCCSTTEEEECBSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHTTSCBCTTSCBS
T ss_pred CccCCCccccccccccCCCCCeEEEEeeCCCCCccceEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHcCCcCCCCCcC
Confidence 999999999997 47899989999999999999999999999999999999999999999999999999988654 7999
Q ss_pred cceEEeeeeee
Q 027222 214 SKVVISNSGEM 224 (226)
Q Consensus 214 ~~i~I~~cg~l 224 (226)
++|+|.+|.++
T Consensus 155 ~~i~I~~~~i~ 165 (166)
T 2x7k_A 155 DDVKIIKAYPS 165 (166)
T ss_dssp SCCEEEEEEEC
T ss_pred CCeEEEEEEEe
Confidence 99999999876
No 24
>1w74_A Peptidyl-prolyl CIS-trans isomerase A; cyclophilin, ppiase, RV0009, rotamase, structural proteomics in europe, spine; 2.6A {Mycobacterium tuberculosis} SCOP: b.62.1.1
Probab=100.00 E-value=9e-48 Score=315.10 Aligned_cols=158 Identities=44% Similarity=0.704 Sum_probs=139.9
Q ss_pred EEEEEECCEEeeEEEEEEecCCCchhHHHHHHhhcCCCCccc--CC---CCccccCCEEEEeecCceEeeCCCCCCCCCC
Q 027222 60 YFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGK--SG---KPLYYKGSSFHRIIPSFMIQGGDFTLGDGRG 134 (226)
Q Consensus 60 ~~~i~~~~~~~G~IvieL~~~~aP~~v~nF~~L~~g~~g~~~--~~---~~~~Y~g~~f~Rv~~~~~iq~Gd~~~~~~~~ 134 (226)
++.+.+. .|+|+||||++.||+||+||++||+|++++.. .| +.+||+|+.||||+|+|||||||+. +++.+
T Consensus 25 ~v~l~t~---~G~I~ieL~~~~aP~tv~NF~~L~tG~~~~~~~~~g~~~~~~~Y~g~~FhRVi~~fmiQgGd~~-g~G~g 100 (191)
T 1w74_A 25 TATLHTN---RGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDPT-GTGRG 100 (191)
T ss_dssp EEEEEET---TEEEEEEECTTTSHHHHHHHHHHHHTCSCCSSCCTTBSSSSCSSTTEEEEEEETTTEEEECCTT-SSSSC
T ss_pred EEEEEec---ceeEEEEEcCCCChHHHHHHHHHhcCCcccccccccccccCCccCCCEEEEEeCCCEEecCCCC-CCCCC
Confidence 4444433 99999999999999999999999999887532 12 3479999999999999999999975 56666
Q ss_pred CccccCCccccc-ccccccCCceEEEeeecCCCCCcceeEEEccCCCCCCCCccEEEEEEc--CHHHHHHHHhCCCC-CC
Q 027222 135 GESIFGESFADE-NFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLS--GMDVVRKIEAEGRQ-SG 210 (226)
Q Consensus 135 ~~~~~~~~~~~e-~~~~~h~~~G~l~~~~~~~~~~~sqF~I~l~~~~~Ld~~~~VFGrVi~--G~~vl~~I~~~~~~-~~ 210 (226)
+ ++..|++| +..++|+++|+|+|+|++|++++|||||++.++|+||++|+|||||++ |||||++|++.+++ ++
T Consensus 101 g---~g~~f~dE~~~~l~h~~~G~lsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~~~Gmdvv~~I~~~~t~~~~ 177 (191)
T 1w74_A 101 G---PGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGND 177 (191)
T ss_dssp C---SSCCBCCCCCTTCCSCSSSEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEECSHHHHHHHHHHHTSCBCTTS
T ss_pred C---CCCccccccccCCCcCCCcEEEEeeCCCCCccceEEEEcCCCcccCCCeeEEEEEEECCCHHHHHHHHcCCcCCCC
Confidence 6 47889999 568999999999999999999999999999999999999999999999 99999999998864 58
Q ss_pred CcccceEEeeeeee
Q 027222 211 EPKSKVVISNSGEM 224 (226)
Q Consensus 211 ~P~~~i~I~~cg~l 224 (226)
+|.++|+|.+|+++
T Consensus 178 ~P~~~v~I~~~~i~ 191 (191)
T 1w74_A 178 RPTDPVVIESITIS 191 (191)
T ss_dssp CBSSCCEEEEEEEC
T ss_pred CcCCCeEEEEEEEC
Confidence 99999999999974
No 25
>2poe_A Cyclophilin-like protein, putative; cryptosporidium parvum cyclophilin isomerase, structural genomics; 2.01A {Cryptosporidium parvum iowa II} PDB: 2qer_A
Probab=100.00 E-value=8.4e-48 Score=314.10 Aligned_cols=146 Identities=42% Similarity=0.711 Sum_probs=137.5
Q ss_pred EeeEEEEEEecCCCchhHHHHHHhhcCCCCcccCCCCccccCCEEEEeecCceEeeCCCCCCCCCCCccccCCcccccc-
Q 027222 69 PIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGRGGESIFGESFADEN- 147 (226)
Q Consensus 69 ~~G~IvieL~~~~aP~~v~nF~~L~~g~~g~~~~~~~~~Y~g~~f~Rv~~~~~iq~Gd~~~~~~~~~~~~~~~~~~~e~- 147 (226)
+.|+|+||||++.||+||+||++||+++ ||+|+.||||+|+|||||||+. +++.++.++|+..+++|.
T Consensus 24 ~~G~i~ieL~~~~aP~t~~NF~~L~~~g----------~Y~g~~FhRvi~~f~iQgGd~~-~~g~gg~si~g~~~~dE~~ 92 (185)
T 2poe_A 24 NYGDLKFELFCSQCPKACKNFLALSASG----------YYKNTIFHKNIKGFIIQGGDPT-GTGKGGESIYGRYFDDEIY 92 (185)
T ss_dssp TTEEEEEEECTTTCHHHHHHHHHHHHTT----------TTTTEEEEEECTTSEEEEEETT-SSSSCCCBTTBSCBCCCCC
T ss_pred cCccEEEEEeCCCCcHHHHHHHHHhccC----------CCCCCEEEEEECCCEEEcCCCC-CCCCCCCccCCCccccccc
Confidence 3999999999999999999999999654 9999999999999999999987 778889999999999997
Q ss_pred cccccCCceEEEeeecC----CCCCcceeEEEccCCCCCCCCccEEEEEEcCHHHHHHHHhCCCC-CCCcccceEEeeee
Q 027222 148 FKLKHTGPGVLSMANAG----PDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQ-SGEPKSKVVISNSG 222 (226)
Q Consensus 148 ~~~~h~~~G~l~~~~~~----~~~~~sqF~I~l~~~~~Ld~~~~VFGrVi~G~~vl~~I~~~~~~-~~~P~~~i~I~~cg 222 (226)
..++|+++|+|+|||++ |++++|||||+++++|+||++|+|||||++|||||++|++.+++ +++|.++|+|.+|+
T Consensus 93 ~~l~h~~~G~lsmA~~g~~~~p~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~~~v~I~~~~ 172 (185)
T 2poe_A 93 PELKYDRRGILSMASKGASKKPNTNGSQFFITYSSLPQLNGEYVIFGKLIDGFETLNTLENCPSDKSHKPIDEIIIKDIV 172 (185)
T ss_dssp TTSCCCSTTEEEECCSCC-CCCSCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHSCBCTTSCBSSCCEEEEEE
T ss_pred CCCccCCCeEEEEecCCCCCCCCCccceEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCCcCCCeEEEEEE
Confidence 78899899999999998 99999999999999999999999999999999999999998865 58999999999999
Q ss_pred eec
Q 027222 223 EMA 225 (226)
Q Consensus 223 ~l~ 225 (226)
++.
T Consensus 173 i~~ 175 (185)
T 2poe_A 173 IHS 175 (185)
T ss_dssp EEC
T ss_pred EEC
Confidence 985
No 26
>2ok3_A Peptidyl-prolyl CIS-trans isomerase-like 3; beta-barrel, helix, disulfide bridge; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1xyh_A 2oju_A*
Probab=100.00 E-value=1.1e-47 Score=307.49 Aligned_cols=147 Identities=47% Similarity=0.738 Sum_probs=137.6
Q ss_pred EEeeEEEEEEecCCCchhHHHHHHhhcCCCCcccCCCCccccCCEEEEeecCceEeeCCCCCCCCCCCccccCCcccccc
Q 027222 68 KPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGRGGESIFGESFADEN 147 (226)
Q Consensus 68 ~~~G~IvieL~~~~aP~~v~nF~~L~~g~~g~~~~~~~~~Y~g~~f~Rv~~~~~iq~Gd~~~~~~~~~~~~~~~~~~~e~ 147 (226)
|+.|+|+||||++.||+||+||++||+++ ||+|+.||||+|+|||||||+. +++.++.++|+..+++|.
T Consensus 7 T~~G~i~ieL~~~~aP~t~~NF~~L~~~g----------~Y~g~~fhRvi~~f~iQgGd~~-~~g~gg~si~g~~~~dE~ 75 (161)
T 2ok3_A 7 TDVGDIKIEVFCERTPKTCENFLALCASN----------YYNGCIFHRNIKGFMVQTGDPT-GTGRGGNSIWGKKFEDEY 75 (161)
T ss_dssp ETTEEEEEEECTTTCHHHHHHHHHHHHTT----------TTTTCBCCEEETTTEEEECCTT-SSSSCCCCTTSSCBCCCC
T ss_pred eCCccEEEEEcCCCCcHHHHHHHHHhhhc----------ccCCCEEEEEECCCEEecCCCC-CCCCCCCcccCCcccccc
Confidence 34999999999999999999999999654 9999999999999999999988 778889999999999997
Q ss_pred c-ccccCCceEEEeeecCCCCCcceeEEEccCCCCCCCCccEEEEEEcCHHHHHHHHhCCCCC--CCcccceEEeeeeee
Q 027222 148 F-KLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQS--GEPKSKVVISNSGEM 224 (226)
Q Consensus 148 ~-~~~h~~~G~l~~~~~~~~~~~sqF~I~l~~~~~Ld~~~~VFGrVi~G~~vl~~I~~~~~~~--~~P~~~i~I~~cg~l 224 (226)
. .++|+++|+|+|++++|++++|||||+++++|+||++|+|||||++|||+|++|++.+++. ++|.++|+|.+|.++
T Consensus 76 ~~~l~h~~~G~lsma~~gp~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~~~~~~~~P~~~v~I~~~~i~ 155 (161)
T 2ok3_A 76 SEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIH 155 (161)
T ss_dssp CTTCCSCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTCCBCTTTCCBSSCCBEEEEEEE
T ss_pred CcCcCcCCCeEEEEecCCCCCcceEEEEEcCCCCccCCCEeEEEEEeCCHHHHHHHHhCCccCCCCCcCCCeEEEEEEEe
Confidence 5 6889899999999999999999999999999999999999999999999999999988654 799999999999988
Q ss_pred c
Q 027222 225 A 225 (226)
Q Consensus 225 ~ 225 (226)
+
T Consensus 156 ~ 156 (161)
T 2ok3_A 156 A 156 (161)
T ss_dssp C
T ss_pred c
Confidence 5
No 27
>2b71_A Cyclophilin-like protein; structural genomics, structural genomics consortium, SGC, isomerase; 2.50A {Plasmodium yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=2e-47 Score=314.05 Aligned_cols=154 Identities=41% Similarity=0.706 Sum_probs=140.2
Q ss_pred CcEEEEEEEECCEEeeEEEEEEecCCCchhHHHHHHhhcCCCCcccCCCCccccCCEEEEeecCceEeeCCCCCCCCCCC
Q 027222 56 THKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGRGG 135 (226)
Q Consensus 56 ~~~v~~~i~~~~~~~G~IvieL~~~~aP~~v~nF~~L~~g~~g~~~~~~~~~Y~g~~f~Rv~~~~~iq~Gd~~~~~~~~~ 135 (226)
+..|.++.. .|+|+||||++.||+||+||++||+.+ ||+|+.||||+|+|||||||+. +++.++
T Consensus 38 ~~~V~l~T~-----~G~I~ieL~~~~aP~tv~NF~~L~~~g----------~Y~g~~FhRVi~~f~iQgGd~~-~~g~gg 101 (196)
T 2b71_A 38 RGYITIYTN-----LGDFEVELYWYHSPKTCLNFYTLCEMG----------FYDNTIFHRVIPNFVIQGGDPT-GTGKGG 101 (196)
T ss_dssp SCEEEEEET-----TEEEEEEECTTTSHHHHHHHHHHHHTT----------TTTTEEEEEEETTTEEEEEETT-SSSSCC
T ss_pred CcEEEEEeC-----CCCEEEEEeCCCCcHHHHHHHHHhhcC----------CcCCCEEEEEeCCcEEEcCCCC-CCCCCC
Confidence 456666544 999999999999999999999999644 9999999999999999999987 778899
Q ss_pred ccccCCcccccc-cccccCCceEEEeeecCCCCCcceeEEEccCCCCCCCCccEEEEEEcCHHHHHHHHhCCCC-CCCcc
Q 027222 136 ESIFGESFADEN-FKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQ-SGEPK 213 (226)
Q Consensus 136 ~~~~~~~~~~e~-~~~~h~~~G~l~~~~~~~~~~~sqF~I~l~~~~~Ld~~~~VFGrVi~G~~vl~~I~~~~~~-~~~P~ 213 (226)
.++|+..+++|. ..++|+++|+|+|++++|++++|||||+++++|+||++|+|||||++|||||++|++.+++ +++|.
T Consensus 102 ~si~g~~~~dE~~~~l~h~~~G~lsMAn~gpns~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~ 181 (196)
T 2b71_A 102 KSIYGEYFEDEINKELKHTGAGILSMSNNGPNTNSSQFFITLAPLPHLDGKHTIFARVSKNMTCIENIASVQTTATNKPI 181 (196)
T ss_dssp CBTTBSCBCCCCCTTCCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTCCBS
T ss_pred CccCCCcccccccCCcCcCCCeEEEEccCCCCCcccEEEEECCCCCccCCCEeEEEEEecCHHHHHHHHhCCcCCCCCCC
Confidence 999999999994 5789989999999999999999999999999999999999999999999999999998864 58999
Q ss_pred cceEEeeeeeec
Q 027222 214 SKVVISNSGEMA 225 (226)
Q Consensus 214 ~~i~I~~cg~l~ 225 (226)
++|+|.+|.++.
T Consensus 182 ~~i~I~~~~i~~ 193 (196)
T 2b71_A 182 FDLKILRTSTAV 193 (196)
T ss_dssp SCCEEEEEEC--
T ss_pred CCeEEEEEEEec
Confidence 999999999875
No 28
>2a2n_A Peptidylprolyl isomerase domain and WD repeat CON; CIS-trans isomerization, protein-folding, peptidylprolyl ISO structural genomics; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=3.8e-47 Score=307.95 Aligned_cols=143 Identities=52% Similarity=0.822 Sum_probs=135.2
Q ss_pred eeEEEEEEecCCCchhHHHHHHhhcCCCCcccCCCCccccCCEEEEeecCceEeeCCCCCCCCCCCccccCCccccccc-
Q 027222 70 IGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGRGGESIFGESFADENF- 148 (226)
Q Consensus 70 ~G~IvieL~~~~aP~~v~nF~~L~~g~~g~~~~~~~~~Y~g~~f~Rv~~~~~iq~Gd~~~~~~~~~~~~~~~~~~~e~~- 148 (226)
.|+|+||||++.||+||+||++||+.+ ||+|+.||||+|+|||||||+. +++.++.++|+..+++|..
T Consensus 30 ~G~i~ieL~~~~aP~t~~NF~~L~~~g----------~Y~g~~FhRvi~~f~iQgGd~~-~~g~gg~si~g~~~~dE~~~ 98 (176)
T 2a2n_A 30 MGDIHTKLFPVECPKTVENFCVHSRNG----------YYNGHTFHRIIKGFMIQTGDPT-GTGMGGESIWGGEFEDEFHS 98 (176)
T ss_dssp TEEEEEEECTTTCHHHHHHHHHHHHTT----------TTTTCBCCEEETTTEEEECCTT-SSSSCCCCTTSSCBCCCCCT
T ss_pred CccEEEEEeCCCChHHHHHHHHHhhcC----------ccCCCEEEEEECCcEEEccCCC-CCCCCCCcccCCcccccccc
Confidence 999999999999999999999999644 9999999999999999999986 6788999999999999987
Q ss_pred ccccCCceEEEeeecCCCCCcceeEEEccCCCCCCCCccEEEEEEcCHHHHHHHHhCCCC--CCCcccceEEeeeee
Q 027222 149 KLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQ--SGEPKSKVVISNSGE 223 (226)
Q Consensus 149 ~~~h~~~G~l~~~~~~~~~~~sqF~I~l~~~~~Ld~~~~VFGrVi~G~~vl~~I~~~~~~--~~~P~~~i~I~~cg~ 223 (226)
.++|+++|+|+|++++|++++|||||++.++|+||++|+|||||++|||||++|++.+++ +++|.++|+|.+|-+
T Consensus 99 ~l~h~~~G~lsmA~~gp~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~~P~~~v~I~~v~v 175 (176)
T 2a2n_A 99 TLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRISNVKVNPKTDKPYEDVSIINITV 175 (176)
T ss_dssp TCCSCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTTCCBSSCCBEEEEEE
T ss_pred ccccCCceEEEEEeCCCCCcccEEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHcCCccCCCCccCCCeEEEEEEE
Confidence 589999999999999999999999999999999999999999999999999999998876 789999999999864
No 29
>3bo7_A Peptidyl-prolyl CIS-trans isomerase cyclophilin-T; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, structural G structural genomics consortium, SGC; HET: BMT; 2.35A {Toxoplasma gondii}
Probab=100.00 E-value=3.9e-47 Score=314.17 Aligned_cols=155 Identities=34% Similarity=0.566 Sum_probs=136.2
Q ss_pred cEEEEEEEECCEEeeEEEEEEecCCCchhHHHHHHhhcCCCCcccCCCCccccCCEEEEeecCceEeeC-----CCCCCC
Q 027222 57 HKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGG-----DFTLGD 131 (226)
Q Consensus 57 ~~v~~~i~~~~~~~G~IvieL~~~~aP~~v~nF~~L~~g~~g~~~~~~~~~Y~g~~f~Rv~~~~~iq~G-----d~~~~~ 131 (226)
.+.++.|.++ .|+|+||||++.||+||+||++||+.+ ||+|+.||||+|+|||||| |+. ++
T Consensus 5 ~~~~v~l~T~---~G~i~ieL~~~~aP~t~~NF~~L~~~g----------~Ydg~~FhRvi~~f~iQgG~~~~~Dp~-~~ 70 (201)
T 3bo7_A 5 KKGYLRIVTT---QGSLNIELHADMAPRACDSFLRLCAVK----------YFDDTIFHRCIRNFMIQGGRAELRQPS-KK 70 (201)
T ss_dssp CCEEEEEEET---TEEEEEEECTTTCHHHHHHHHHHHHTT----------TTTTCBEEEEETTTEEEECCGGGCCC----
T ss_pred CceEEEEEeC---CCCEEEEEcCCCCcHHHHHHHHHHhcC----------ccCCCEEEEeeCCCEEEcCcccccCCC-CC
Confidence 3456666655 999999999999999999999999644 9999999999999999999 987 67
Q ss_pred CCCCcccc-------CCccccc-ccccccCCceEEEeeecCCCCCcceeEEEccCCCCCCCCccEEEEEEcCHHHHHHHH
Q 027222 132 GRGGESIF-------GESFADE-NFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIE 203 (226)
Q Consensus 132 ~~~~~~~~-------~~~~~~e-~~~~~h~~~G~l~~~~~~~~~~~sqF~I~l~~~~~Ld~~~~VFGrVi~G~~vl~~I~ 203 (226)
+.++.++| +..+++| +..++|+++|+|+|++++|++++|||||+++++|+||++|+|||||++|||||++|+
T Consensus 71 g~gg~si~~~~~~~~g~~f~dE~~~~l~h~~~G~lsmA~~gp~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~ 150 (201)
T 3bo7_A 71 KEVQQSPRSISGFPGGAPFEDEFDNRLVHQGIGVLSMANDGKHSNLSEFFITFKSCEHLNNKHTIFGRVVGGLDVLRQWE 150 (201)
T ss_dssp ----CCSSCCCSSTTCCCBCCCCCTTCCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHT
T ss_pred CCCCccccccccccCCCcccCcccCCCCcCCCcEEEEeeCCCCCcccEEEEECCCCcccCCCceEEEEEecCHHHHHHHH
Confidence 88889998 8889999 477899899999999999999999999999999999999999999999999999999
Q ss_pred hCCCC-CCCcccceEEeeeeeec
Q 027222 204 AEGRQ-SGEPKSKVVISNSGEMA 225 (226)
Q Consensus 204 ~~~~~-~~~P~~~i~I~~cg~l~ 225 (226)
+.+++ +++|.++|+|.+|+++.
T Consensus 151 ~~~t~~~~~P~~~i~I~~~~v~~ 173 (201)
T 3bo7_A 151 KLETDKKDKPLKPPKVEEIIVFK 173 (201)
T ss_dssp TCCBCTTSCBSSCCBEEEEEEEE
T ss_pred hCCcCCCCCcCCCeEEEEEEEEc
Confidence 98865 48999999999999985
No 30
>2k7n_A Peptidyl-prolyl CIS-trans isomerase-like 1; beta barrel, disorder-order transition, HOOK-like, mRNA processing, mRNA splicing, rotamase; NMR {Homo sapiens}
Probab=100.00 E-value=4.3e-47 Score=313.24 Aligned_cols=154 Identities=49% Similarity=0.853 Sum_probs=141.9
Q ss_pred CcEEEEEEEECCEEeeEEEEEEecCCCchhHHHHHHhhcCCCCcccCCCCccccCCEEEEeecCceEeeCCCCCCCCCCC
Q 027222 56 THKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGRGG 135 (226)
Q Consensus 56 ~~~v~~~i~~~~~~~G~IvieL~~~~aP~~v~nF~~L~~g~~g~~~~~~~~~Y~g~~f~Rv~~~~~iq~Gd~~~~~~~~~ 135 (226)
+..|.|+.. .|+|+||||++.||+||+||++||+.+ ||+|+.||||+|+|||||||+. +++.++
T Consensus 11 ~~~V~l~T~-----~G~I~ieL~~d~aP~tv~NF~~L~~~g----------~Ydg~~FhRVi~~F~iQgGd~~-~~g~gg 74 (203)
T 2k7n_A 11 PPNVYLETS-----MGIIVLELYWKHAPKTCKNFAELARRG----------YYNGTKFHRIIKDFMIQGGDPT-GTGRGG 74 (203)
T ss_dssp CSEEEEEES-----SCEEEEEECTTTCTTHHHHHHHHHHHT----------CGGGCEEEEEETTTEEEEECSS-SSSSCC
T ss_pred CCEEEEEeC-----CCcEEEEEccCCCcHHHHHHHHHHhcC----------ccCCCEEEEEeCCcEEEcCCCC-CCCCCC
Confidence 356777655 999999999999999999999999543 9999999999999999999987 678888
Q ss_pred ccccCCcccccc-cccccCCceEEEeeecCCCCCcceeEEEccCCCCCCCCccEEEEEEcCHHHHHHHHhCCCC-CCCcc
Q 027222 136 ESIFGESFADEN-FKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQ-SGEPK 213 (226)
Q Consensus 136 ~~~~~~~~~~e~-~~~~h~~~G~l~~~~~~~~~~~sqF~I~l~~~~~Ld~~~~VFGrVi~G~~vl~~I~~~~~~-~~~P~ 213 (226)
.++|+..+++|. ..++|.++|+|+|++.+|++++|||||++.++|+||++|+|||||++|||||++|++.+++ +++|.
T Consensus 75 ~si~g~~f~dE~~~~l~h~~~G~lsMAn~gpnsngSQFFIt~~~~~~LDg~~tVFG~VveGmdvv~kI~~~~t~~~~~P~ 154 (203)
T 2k7n_A 75 ASIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDRPV 154 (203)
T ss_dssp CTTSCSCBCCCCCCSSCCCSSCEEEEEESSTTCEEEEEEEESSCCCSSTTTSCEEEEEESCHHHHHHHHSCCEEETTEEC
T ss_pred CccCCCcccccccccccCCCCeEEEEeeCCCCCcccEEEEEcCCCCccCCCeeEEEEEEcCHHHHHHHHcCCcCCCCCcC
Confidence 999999999997 4789998999999999999999999999999999999999999999999999999998754 47999
Q ss_pred cceEEeeeeeec
Q 027222 214 SKVVISNSGEMA 225 (226)
Q Consensus 214 ~~i~I~~cg~l~ 225 (226)
++|+|.+|++++
T Consensus 155 ~~V~I~~~~v~~ 166 (203)
T 2k7n_A 155 DDVKIIKAYPSG 166 (203)
T ss_dssp CCCBEEEEEECC
T ss_pred CCeEEEEEEEEe
Confidence 999999999985
No 31
>2hq6_A Serologically defined colon cancer antigen 10; protein folding, peptidyl-prolyl CIS-trans isomerase, struct genomics; 1.75A {Homo sapiens}
Probab=100.00 E-value=3.9e-46 Score=304.12 Aligned_cols=157 Identities=38% Similarity=0.658 Sum_probs=141.9
Q ss_pred ccccCcEEEEEEEECCEEeeEEEEEEecCCCchhHHHHHHhhcCCCCcccCCCCccccCCEEEEeecCceEeeCCCCCCC
Q 027222 52 LEKVTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGD 131 (226)
Q Consensus 52 ~~~~~~~v~~~i~~~~~~~G~IvieL~~~~aP~~v~nF~~L~~g~~g~~~~~~~~~Y~g~~f~Rv~~~~~iq~Gd~~~~~ 131 (226)
.|+.+++|++++. .|+|+||||++.||+||+||++||+.+ ||+|+.||||+|+|||||||+. ++
T Consensus 20 ~~~~~~~V~l~T~-----~G~I~ieL~~~~aP~tv~NF~~L~~~g----------~Y~g~~FhRvi~~f~iQgGd~~-~~ 83 (185)
T 2hq6_A 20 EPPTNGKVLLKTT-----AGDIDIELWSKEAPKACRNFIQLCLEA----------YYDNTIFHRVVPGFIVQGGDPT-GT 83 (185)
T ss_dssp CCCCBCEEEEEET-----TEEEEEEEBTTTCHHHHHHHHHHHHTT----------TTTTEECCEEETTTEEEECCTT-SS
T ss_pred CCCCCCEEEEEeC-----CccEEEEEeCCCCcHHHHHHHHHhhcC----------ccCCCEEEEEECCCEEEcCCCC-CC
Confidence 3445678888775 999999999999999999999999654 9999999999999999999987 77
Q ss_pred CCCCccccCCccccccc-ccccCCceEEEeeecCCCCCcceeEEEccCCCCCCCCccEEEEEEcCHHHH--HHHHhCCC-
Q 027222 132 GRGGESIFGESFADENF-KLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVV--RKIEAEGR- 207 (226)
Q Consensus 132 ~~~~~~~~~~~~~~e~~-~~~h~~~G~l~~~~~~~~~~~sqF~I~l~~~~~Ld~~~~VFGrVi~G~~vl--~~I~~~~~- 207 (226)
+.++.++|+..+++|.. .++|+++|+|+|+|+++++++|||||+++++|+||++|+|||||+ ||+++ ++|++.++
T Consensus 84 g~gg~si~g~~~~dE~~~~l~h~~~G~lsMA~~g~~s~gSQFFIt~~~~~~LDg~~tVFG~V~-G~~v~~~~~i~~~~~~ 162 (185)
T 2hq6_A 84 GSGGESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKVT-GDTVYNMLRLSEVDID 162 (185)
T ss_dssp SSCCCCTTSSCBCCCCBTTBCSCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEC-GGGHHHHHHTTCSCBC
T ss_pred CCCCCcccCCccccccccCcccCCCeEEEEccCCCCCccceEEEECCCCCccCCCceEEEEEE-eCeeehhhHHhhCCcC
Confidence 88899999999999975 688989999999999999999999999999999999999999999 88874 67777765
Q ss_pred CCCCcccceEEeeeeeec
Q 027222 208 QSGEPKSKVVISNSGEMA 225 (226)
Q Consensus 208 ~~~~P~~~i~I~~cg~l~ 225 (226)
++++|.++|+|.+|++++
T Consensus 163 ~~~~P~~~v~I~~~~v~~ 180 (185)
T 2hq6_A 163 DDERPHNPHKIKSCEVLF 180 (185)
T ss_dssp TTSCBSSCCEEEEEEEEE
T ss_pred CCCCCCCCeEEEEEEEeC
Confidence 578999999999999985
No 32
>1v9t_A Cyclophilin B; beta barrel, isomerase-isomerase inhibitor complex; HET: NIT; 1.70A {Escherichia coli} SCOP: b.62.1.1 PDB: 1j2a_A* 1vai_A* 1clh_A
Probab=100.00 E-value=6.8e-46 Score=298.45 Aligned_cols=152 Identities=32% Similarity=0.499 Sum_probs=133.0
Q ss_pred CcEEEEEEEECCEEeeEEEEEEecCCCchhHHHHHHhhcCCCCcccCCCCccccCCEEEEeecCceEeeCCCCCCCCCCC
Q 027222 56 THKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGRGG 135 (226)
Q Consensus 56 ~~~v~~~i~~~~~~~G~IvieL~~~~aP~~v~nF~~L~~g~~g~~~~~~~~~Y~g~~f~Rv~~~~~iq~Gd~~~~~~~~~ 135 (226)
+++|+|+.. .|+|+||||++.||+||+||++||+.+ ||+|+.||||+|+|||||||+....+
T Consensus 4 ~~~v~~~t~-----~G~i~ieL~~~~aP~t~~NF~~L~~~g----------~Y~g~~FhRvi~~f~iQgGd~~~~~~--- 65 (166)
T 1v9t_A 4 DPHVLLTTS-----AGNIELELDKQKAPVSVQNFVDYVNSG----------FYNNTTFHRVIPGFMIQGGGFTEQMQ--- 65 (166)
T ss_dssp SCEEEEEET-----TEEEEEEECTTTCHHHHHHHHHHHHTT----------TTTTCBEEEEETTTEEEESSBCTTCC---
T ss_pred CeEEEEEeC-----CccEEEEEcCCCCcHHHHHHHHHhccC----------CCCCCEEEEEECCcEEEcCCcCcCCC---
Confidence 457777744 999999999999999999999999543 99999999999999999999874332
Q ss_pred ccccCCcccccccccccCCceEEEeeec-CCCCCcceeEEEccCCCCCCCC-----ccEEEEEEcCHHHHHHHHhCCCCC
Q 027222 136 ESIFGESFADENFKLKHTGPGVLSMANA-GPDTNGSQFFITTVITSWLDGR-----HVVFGKVLSGMDVVRKIEAEGRQS 209 (226)
Q Consensus 136 ~~~~~~~~~~e~~~~~h~~~G~l~~~~~-~~~~~~sqF~I~l~~~~~Ld~~-----~~VFGrVi~G~~vl~~I~~~~~~~ 209 (226)
...++..+++|.....|+.+|+|+|||+ +|++++|||||++.++|+||++ |+|||||++|||||++|++.+++.
T Consensus 66 ~~~~g~~~~dE~~~~l~~~~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~tvFG~Vv~G~dvv~~I~~~~~~~ 145 (166)
T 1v9t_A 66 QKKPNPPIKNEADNGLRNTRGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVADKISQVPTHD 145 (166)
T ss_dssp BCCCCCCBCCCGGGSCCCCTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSCCCCCEEEEEEECHHHHHHHHTSCEEE
T ss_pred CCCCCCcccccccccccCCceEEEEeecCCCCCccceEEEEeCCccccCCccCcCCeeEEEEEecCHHHHHHHHhCCCCC
Confidence 2345677899987656667999999996 6999999999999999999998 999999999999999999988653
Q ss_pred -----CCcccceEEeeeeeec
Q 027222 210 -----GEPKSKVVISNSGEMA 225 (226)
Q Consensus 210 -----~~P~~~i~I~~cg~l~ 225 (226)
++|.++|+|.+|.+++
T Consensus 146 ~~~~~~~P~~~v~I~~~~v~~ 166 (166)
T 1v9t_A 146 VGPYQNVPSKPVVILSATVLP 166 (166)
T ss_dssp ETTEEEEESSCCBEEEEEECC
T ss_pred CCccCCCcCCCeEEEEEEEeC
Confidence 6899999999999874
No 33
>1lop_A Cyclophilin A; rotamase, isomerase-isomerase inhibitor complex; HET: NIT; 1.80A {Escherichia coli} SCOP: b.62.1.1 PDB: 2nul_A 2rs4_A
Probab=100.00 E-value=1.3e-45 Score=296.22 Aligned_cols=143 Identities=36% Similarity=0.584 Sum_probs=128.5
Q ss_pred EeeEEEEEEecCCCchhHHHHHHhhcCCCCcccCCCCccccCCEEEEeecCceEeeCCCCCCCCCCCccccCCccccccc
Q 027222 69 PIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGRGGESIFGESFADENF 148 (226)
Q Consensus 69 ~~G~IvieL~~~~aP~~v~nF~~L~~g~~g~~~~~~~~~Y~g~~f~Rv~~~~~iq~Gd~~~~~~~~~~~~~~~~~~~e~~ 148 (226)
+.|+|+||||++.||+||+||++||+.+ ||+|+.||||+|+|||||||+..+. +.++++..+++|..
T Consensus 7 ~~G~i~ieL~~~~aP~t~~NF~~L~~~g----------~Y~g~~FhRvi~~f~iQgGd~~~~~---g~~~~g~~~~dE~~ 73 (164)
T 1lop_A 7 NHGDIVIKTFDDKAPETVKNFLDYCREG----------FYNNTIFHRVINGFMIQGGGFEPGM---KQKATKEPIKNEAN 73 (164)
T ss_dssp TTEEEEEEECTTTSHHHHHHHHHHHHTT----------TTTTEECCEEETTTEEEESSEETTT---EECCCCCCBCCCCC
T ss_pred CCCCEEEEEeCCCCcHHHHHHHHHHhcC----------CCCCCEEEEEeCCceEecCCcccCC---CcCCCCCccccccc
Confidence 3999999999999999999999999543 9999999999999999999987433 45677888999986
Q ss_pred c-cccCCceEEEeeec-CCCCCcceeEEEccCCCCCCCC--------ccEEEEEEcCHHHHHHHHhCCCC-----CCCcc
Q 027222 149 K-LKHTGPGVLSMANA-GPDTNGSQFFITTVITSWLDGR--------HVVFGKVLSGMDVVRKIEAEGRQ-----SGEPK 213 (226)
Q Consensus 149 ~-~~h~~~G~l~~~~~-~~~~~~sqF~I~l~~~~~Ld~~--------~~VFGrVi~G~~vl~~I~~~~~~-----~~~P~ 213 (226)
. ++| .+|+|+|||+ +|++++|||||+++++|+||++ |+|||||++|||||++|++.+++ +++|.
T Consensus 74 ~~l~~-~~G~lsmA~~~~p~s~gSQFfI~~~~~~~Ld~~~~~~~~~~~tvFG~Vv~G~dvv~~I~~~~t~~~~~~~~~P~ 152 (164)
T 1lop_A 74 NGLKN-TRGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYCVFAEVVDGMDEVDKIKGVATGRSGMHQDVPK 152 (164)
T ss_dssp SSCCC-CTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTSCCCEEEEEEECHHHHHHHHTSCEEEETTEEEEES
T ss_pred ccccc-CccEEEEeecCCCCCccceEEEEcCCccccCCccccccCCceEEEEEEecCHHHHHHHHhCCcCCccccCCCcC
Confidence 5 555 6999999984 7999999999999999999998 99999999999999999998865 37999
Q ss_pred cceEEeeeeeec
Q 027222 214 SKVVISNSGEMA 225 (226)
Q Consensus 214 ~~i~I~~cg~l~ 225 (226)
++|+|.+|++++
T Consensus 153 ~~v~I~~~~v~~ 164 (164)
T 1lop_A 153 EDVIIESVTVSE 164 (164)
T ss_dssp SCCEEEEEEECC
T ss_pred CCeEEEEEEEeC
Confidence 999999999874
No 34
>3s6m_A Peptidyl-prolyl CIS-trans isomerase; seattle structural genomics center for infectious disease; 1.65A {Burkholderia pseudomallei} SCOP: b.62.1.1 PDB: 3t1u_A*
Probab=100.00 E-value=9.6e-45 Score=292.14 Aligned_cols=142 Identities=35% Similarity=0.490 Sum_probs=125.4
Q ss_pred eeEEEEEEecCCCchhHHHHHHhhcCCCCcccCCCCccccCCEEEEeecCceEeeCCCCCCCCCCCccccCCcccccccc
Q 027222 70 IGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGRGGESIFGESFADENFK 149 (226)
Q Consensus 70 ~G~IvieL~~~~aP~~v~nF~~L~~g~~g~~~~~~~~~Y~g~~f~Rv~~~~~iq~Gd~~~~~~~~~~~~~~~~~~~e~~~ 149 (226)
.|+|+||||++.||+||+||++||+++ ||+|+.||||+|+|||||||+.... +...++..+++|...
T Consensus 12 ~G~i~ieL~~~~aP~t~~NF~~L~~~g----------~Y~g~~FhRvi~~f~iQgGd~~~~~---~~~~~~~~~~~E~~~ 78 (167)
T 3s6m_A 12 HGVIKLELDEAKAPKTVENFLNYVKKG----------HYDGTIFHRVINGFMIQGGGFEPGL---KQKPTDAPIANEANN 78 (167)
T ss_dssp TEEEEEEECTTTCHHHHHHHHHHHHHT----------TTTTEECCEEETTTEEEESSEETTT---EECCCCCCBCCCGGG
T ss_pred CceEEEEEeCCCCcHHHHHHHHHhhhc----------ccCCCEeEEecCCcEEEeccccCCC---CCCCCCCccCCcccc
Confidence 999999999999999999999999644 9999999999999999999987433 223456778888654
Q ss_pred cccCCceEEEeee-cCCCCCcceeEEEccCCCCCCCC--------ccEEEEEEcCHHHHHHHHhCCCC-----CCCcccc
Q 027222 150 LKHTGPGVLSMAN-AGPDTNGSQFFITTVITSWLDGR--------HVVFGKVLSGMDVVRKIEAEGRQ-----SGEPKSK 215 (226)
Q Consensus 150 ~~h~~~G~l~~~~-~~~~~~~sqF~I~l~~~~~Ld~~--------~~VFGrVi~G~~vl~~I~~~~~~-----~~~P~~~ 215 (226)
..++.+|+|+|+| .+|++++|||||++.++++||++ |+|||||++|||||++|++.+++ +++|.++
T Consensus 79 ~l~~~~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~~~~~VFG~Vv~G~dvv~~I~~~~t~~~~~~~~~P~~~ 158 (167)
T 3s6m_A 79 GLKNDTYTIAMARTNDPHSATAQFFINVNDNEFLNHSSPTPQGWGYAVFGKVVEGQDIVDKIKAVKTGSKGFHQDVPNDD 158 (167)
T ss_dssp CCCCCTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTCCCCEEEEEEECHHHHHHHTTSCBBC---CBTCBSSC
T ss_pred cccCCccEEEEecCCCCCCccceEEEEcCCchhcCCcccccCCCCceEEEEEEcCHHHHHHHHcCCcCCCcccCCCcCCC
Confidence 4445799999999 67999999999999999999998 99999999999999999998765 3799999
Q ss_pred eEEeeeeee
Q 027222 216 VVISNSGEM 224 (226)
Q Consensus 216 i~I~~cg~l 224 (226)
|+|.+|.+|
T Consensus 159 v~I~~~~il 167 (167)
T 3s6m_A 159 VVIEKAVVV 167 (167)
T ss_dssp CEEEEEEEC
T ss_pred eEEEEEEEC
Confidence 999999875
No 35
>3bkp_A Cyclophilin; malaria, isomerase, structural GENO structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=8.1e-45 Score=305.62 Aligned_cols=159 Identities=32% Similarity=0.544 Sum_probs=141.0
Q ss_pred ccccccCcEEEEEEEECCEEeeEEEEEEecCCCchhHHHHHHhhcCCCCcccCCCCccccCCEEEEeecCceEeeCCCCC
Q 027222 50 EELEKVTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTL 129 (226)
Q Consensus 50 ~~~~~~~~~v~~~i~~~~~~~G~IvieL~~~~aP~~v~nF~~L~~g~~g~~~~~~~~~Y~g~~f~Rv~~~~~iq~Gd~~~ 129 (226)
...|+.+.+|+|++. .|+|+||||++.||+||+||++||+++ ||+|+.||||+|+|||||||+.
T Consensus 15 ~~~p~~~~~V~l~T~-----~G~I~ieL~~d~aP~tv~NF~~L~~~g----------~Ydgt~FhRVi~~FmiQgGdp~- 78 (232)
T 3bkp_A 15 YFQGSTRGKVVLHTS-----LGDLDVELWARECPLACRNFVQLCLEG----------YYVNTIFHRVVKDFIVQGGDPT- 78 (232)
T ss_dssp GCCCSCBCEEEEEET-----TEEEEEEEBTTTCHHHHHHHHHHHHHT----------TTTTCBEEEEETTTEEEECCTT-
T ss_pred cccCCCCCEEEEEEC-----CCcEEEEEcCCCCcHHHHHHHHHhhcC----------ccCCCEEEEEeCCCEEEcCCCC-
Confidence 334555778877765 999999999999999999999999644 9999999999999999999987
Q ss_pred CCCCCCcccc--CCccccccc-ccccCCceEEEeeecCC--------------CCCcceeEEEccCCCCCCCCccEEEEE
Q 027222 130 GDGRGGESIF--GESFADENF-KLKHTGPGVLSMANAGP--------------DTNGSQFFITTVITSWLDGRHVVFGKV 192 (226)
Q Consensus 130 ~~~~~~~~~~--~~~~~~e~~-~~~h~~~G~l~~~~~~~--------------~~~~sqF~I~l~~~~~Ld~~~~VFGrV 192 (226)
+++.++.++| +..|++|.. .++|+.+|+|+|+++++ ++++|||||+++++|+||++|+|||||
T Consensus 79 ~~G~Gg~si~~~g~~f~dE~~~~l~h~~~G~lsMA~~g~~~~~~~n~e~g~~~~sngSQFFIt~~~~p~LDg~~tVFG~V 158 (232)
T 3bkp_A 79 GTGRGGADTTFDGKPFDVETHPRLKFRYRGLVGVANLGRSSKDAENDERGRSLGTNGNQFFITLARADVLNNAYTLFGKV 158 (232)
T ss_dssp SSSSCCCCCTTTTCCBCCCCCTTCCCCSTTEEEECCCC----------------CBCSCEEEESSCCGGGTTTSCEEEEE
T ss_pred CCCCCCCccccCCCccCCccccCcCcCCCeEEEEeccCCcccccccccccccCCCcCCEEEEECCCCcccCCCccEEEEE
Confidence 7788999999 889999975 68899999999999886 699999999999999999999999999
Q ss_pred EcCHHH--HHHHHhCCC-CCCCcccceEEeeeeeec
Q 027222 193 LSGMDV--VRKIEAEGR-QSGEPKSKVVISNSGEMA 225 (226)
Q Consensus 193 i~G~~v--l~~I~~~~~-~~~~P~~~i~I~~cg~l~ 225 (226)
+ ||++ |++|++.++ ++++|.++|+|.+|++++
T Consensus 159 v-g~~v~~v~kI~~~~t~~~~~P~~~i~I~~~~vl~ 193 (232)
T 3bkp_A 159 T-GHTLYNLMKFNDLEVGKEDRPMTPPFIKSVDVLW 193 (232)
T ss_dssp C-GGGHHHHHHHTTSCBCGGGCBSSCCBEEEEEEEE
T ss_pred E-eCchHHHHHHHcCCcCCCCCcCCCeEEEEEEEEc
Confidence 9 7765 899998876 468999999999999985
No 36
>3rfy_A Peptidyl-prolyl CIS-trans isomerase CYP38, chloro; cyclophilin, peptidyl prolyl isomerase, ppiase, TLP,; 2.39A {Arabidopsis thaliana}
Probab=100.00 E-value=8.7e-41 Score=296.43 Aligned_cols=163 Identities=22% Similarity=0.346 Sum_probs=138.9
Q ss_pred cCCccCCccccccccCcEEEEEEEEC-----CEEeeEEEEEEecCCCchhHHHHHHhhcCCCCcccCCCCccccCCEEEE
Q 027222 41 HNSEEGNSREELEKVTHKVYFDIEVG-----GKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHR 115 (226)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~v~~~i~~~-----~~~~G~IvieL~~~~aP~~v~nF~~L~~g~~g~~~~~~~~~Y~g~~f~R 115 (226)
-+...+..|..+|+++.+++++|.++ .+..|+|+||||++.||+||+||++||+.+ ||||+.|||
T Consensus 153 fp~~vP~~y~~~P~l~gra~V~m~t~~~~~~~~~~G~I~IeL~~d~AP~Tv~NFl~L~~~G----------fYdGt~FHR 222 (369)
T 3rfy_A 153 FPYEVPEEYRNMPLLKGRASVDMKVKIKDNPNIEDCVFRIVLDGYNAPVTAGNFVDLVERH----------FYDGMEIQR 222 (369)
T ss_dssp SCSSCCSSCTTSCEECSEEEEEEEEECCSCSSCSEEEEEEEEETTTCHHHHHHHHHHHHTT----------TTTTEECEE
T ss_pred CCccCchhcccCccCCCCeEEEEEEeccCCCcccceEEEEEEeCCCCcHHHHHHHHHhhcC----------CcCCCeeee
Confidence 34567788999999999999999985 234899999999999999999999999643 999999999
Q ss_pred eecCceEeeCCCCCCCCCC---------------------CccccCCccccccc-----ccccCCceEEEeeec--CCCC
Q 027222 116 IIPSFMIQGGDFTLGDGRG---------------------GESIFGESFADENF-----KLKHTGPGVLSMANA--GPDT 167 (226)
Q Consensus 116 v~~~~~iq~Gd~~~~~~~~---------------------~~~~~~~~~~~e~~-----~~~h~~~G~l~~~~~--~~~~ 167 (226)
| ++|||||||+. +++.| +.++|+..+++|++ .++|+++|+|+|+|+ +||+
T Consensus 223 V-~gFmIQgGDp~-g~G~G~~~~~~g~~~~iP~E~~~~G~g~piyg~~fedegf~~~~~~L~h~~~G~LsMAns~~gPnS 300 (369)
T 3rfy_A 223 S-DGFVVQTGDPE-GPAEGFIDPSTEKTRTVPLEIMVTGEKTPFYGSTLEELGLYKAQVVIPFNAFGTMAMAREEFENDS 300 (369)
T ss_dssp E-EEEEECCCCCC-CCCSCCCSCCCCCCCSSSSSSCSSSSCCSCCCSSTGGGTEEEEEEEECCCCCCCCCCSSCCCCCCC
T ss_pred e-CCeeEecCCCC-CCCCCccCcccCcCcccCccccccCCCCCcCCCccccccccccccccccCCCceEEEeecCCCCCC
Confidence 9 99999999997 45544 35677777777754 688999999999997 8999
Q ss_pred CcceeEEEcc-------CCCCCCCCccEEEEEEcCHHHHHHHHhCCCCCCCcccceEEee
Q 027222 168 NGSQFFITTV-------ITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGEPKSKVVISN 220 (226)
Q Consensus 168 ~~sqF~I~l~-------~~~~Ld~~~~VFGrVi~G~~vl~~I~~~~~~~~~P~~~i~I~~ 220 (226)
++|||||+++ +.++||++|+|||||++|||||++|++. .....|+|.+
T Consensus 301 ngSQFFItl~d~~L~~~~~~~LDgkytVFG~VveGmdVVdkI~~G-----D~I~sv~I~~ 355 (369)
T 3rfy_A 301 GSSQVFWLLKESELTPSNSNILDGRYAVFGYVTDNEDFLADLKVG-----DVIESIQVVS 355 (369)
T ss_dssp SSCCCCCCCEEEEECSCCCSSSCSCEEEEEEEEESTTGGGGCCTT-----CEEEEEEEEE
T ss_pred ccceEEEEecccccCCCCCcccCCCeeEEEEEecCHHHHHHHhCC-----CceEEEEEec
Confidence 9999999994 6899999999999999999999999874 3455566654
No 37
>3kop_A Uncharacterized protein; protein with A cyclophilin-like fold, structural genomics, J center for structural genomics, JCSG; 1.90A {Arthrobacter SP}
Probab=95.34 E-value=0.12 Score=40.95 Aligned_cols=33 Identities=18% Similarity=0.243 Sum_probs=26.8
Q ss_pred EEEEEEECCEEee-EEEEEEecCCCchhHHHHHHhh
Q 027222 59 VYFDIEVGGKPIG-RIVMGLFGKAVPKTVENFRALC 93 (226)
Q Consensus 59 v~~~i~~~~~~~G-~IvieL~~~~aP~~v~nF~~L~ 93 (226)
.|++|++.. .| .++.+|..+.||+||+.|+++-
T Consensus 22 r~i~itl~~--~g~~~~A~Lldd~APkTcaA~~~~L 55 (188)
T 3kop_A 22 RYINITLEK--RGVTCKALLLDDVAPRTSKAVWDAL 55 (188)
T ss_dssp CEEEEEETT--TTEEEEEEECTTTSHHHHHHHHHHC
T ss_pred eEEEEEEec--CCeEEEEEEccccChHHHHHHHHhC
Confidence 577787753 34 4789999999999999999976
No 38
>2nnz_A Hypothetical protein; beta-barrel, structural genomics, ontario centre for structu proteomics, OCSP, unknown function; NMR {Archaeoglobus fulgidus}
Probab=92.95 E-value=0.14 Score=39.71 Aligned_cols=105 Identities=18% Similarity=0.175 Sum_probs=60.6
Q ss_pred EEEEECCEEeeEEEEEEecCCCchhHHHHHHhhcCCCCcccCCCCccccCCEEEEeecCceEeeCCCCCCCCCCCccccC
Q 027222 61 FDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGRGGESIFG 140 (226)
Q Consensus 61 ~~i~~~~~~~G~IvieL~~~~aP~~v~nF~~L~~g~~g~~~~~~~~~Y~g~~f~Rv~~~~~iq~Gd~~~~~~~~~~~~~~ 140 (226)
+.|.+++ ..++++|+.+.||+||+.|+++- =+... +.+ +|+-.+..- .
T Consensus 32 I~i~~~~---~~~~a~L~D~~aP~Ta~~f~~~L-------------Pl~~~-~~~--------~g~E~y~~l-------p 79 (153)
T 2nnz_A 32 LRIRFES---AECEVELYEEWAPETVRAIADAL-------------PIKST-ANR--------WGDEIYFTT-------Q 79 (153)
T ss_dssp EEEEETT---EEEEECCCTTSCHHHHHHHHHTC-------------SEEEE-EEE--------ETTEEEECC-------S
T ss_pred EEEEECC---EEEEEEEcCCCCHHHHHHHHHhC-------------CcEEE-HHh--------hCCcEEEEC-------C
Confidence 5556664 56999999999999999999986 12111 111 121000000 0
Q ss_pred Ccccc-cccccccCCceEEEeeecCCCCCcceeEEEccCCCCCCC------CccEEEEEEcCHHHHHHHH
Q 027222 141 ESFAD-ENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDG------RHVVFGKVLSGMDVVRKIE 203 (226)
Q Consensus 141 ~~~~~-e~~~~~h~~~G~l~~~~~~~~~~~sqF~I~l~~~~~Ld~------~~~VFGrVi~G~~vl~~I~ 203 (226)
...+. |+.. .....|-|+....+. .+.|-.++.|...+ .-.+||||.+|+|.|.++.
T Consensus 80 ~~l~~~en~~-~~~~~GDI~Yy~pg~-----~LaIFYg~~p~s~~e~~~as~~~~lG~I~~gle~L~~~~ 143 (153)
T 2nnz_A 80 VAVEKEENSK-DVVELGDVAYWIPGK-----AICLFFGKTPISDDKIRPASAVNVIGRIVNSMEGLKGVA 143 (153)
T ss_dssp CCCCCSSCCB-CCCCTTEEEEETTTT-----EEEEESSCCTTCTTSCCCCSSEEEEEECCSCCCCGGGCC
T ss_pred CCCCCCCCCc-ccCCCCeEEEeCCCC-----EEEEEECCccccccccccccccEEEEEEccCHHHHhhCC
Confidence 00111 2222 233478888766433 37777787753332 2578999999988776653
No 39
>1zx8_A Hypothetical protein TM1367; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: 1PE; 1.90A {Thermotoga maritima} SCOP: b.62.1.3 PDB: 2ka0_A
Probab=71.23 E-value=16 Score=27.44 Aligned_cols=45 Identities=22% Similarity=0.293 Sum_probs=31.4
Q ss_pred CceEEEeeecCCCCCcceeEEEccCCCCCCC------CccEEEEEEcCHHHHHHHH
Q 027222 154 GPGVLSMANAGPDTNGSQFFITTVITSWLDG------RHVVFGKVLSGMDVVRKIE 203 (226)
Q Consensus 154 ~~G~l~~~~~~~~~~~sqF~I~l~~~~~Ld~------~~~VFGrVi~G~~vl~~I~ 203 (226)
..|-|+....+. -|.|-.++.|...+ ...+||||.+|++.+.++.
T Consensus 74 ~~GDIaYw~pgg-----~LaIFyg~~p~s~~e~~~a~~v~~lGrI~~~l~~l~~v~ 124 (136)
T 1zx8_A 74 EIGDVGYWPPGK-----ALCLFFGKTPMSDDKIQPASAVNVIGKIVEGLEDLKKIK 124 (136)
T ss_dssp CTTEEEEEGGGT-----EEEEESSCCTTCSSSBCCSSCEEEEEEEEECGGGGGGCC
T ss_pred CCCcEEEeCCCC-----EEEEEeCCCccccCccccCcCcEEEEEEccCHHHHhhCC
Confidence 467887766543 37777788764443 2689999999987776553
No 40
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=22.50 E-value=61 Score=28.46 Aligned_cols=50 Identities=12% Similarity=0.181 Sum_probs=40.3
Q ss_pred CCceEEEeeecCCCCCcceeEEEccCCCCCCCCccEEEEEE-cCHHHHHHHH
Q 027222 153 TGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVL-SGMDVVRKIE 203 (226)
Q Consensus 153 ~~~G~l~~~~~~~~~~~sqF~I~l~~~~~Ld~~~~VFGrVi-~G~~vl~~I~ 203 (226)
.++|.|.+.|..-..-..|.-|++.+.| -|++.-|+|+|. +-+.+|+-|.
T Consensus 326 r~rGdItIdN~~ygRY~GElQI~l~dlp-~d~r~NVVG~I~~edl~LLd~I~ 376 (385)
T 1x7f_A 326 QERGQVVIGNNSFGKYKGELQIILKEMP-IDERKNIVGTIAEEELFLLDYVG 376 (385)
T ss_dssp BCTTEEEEECGGGGGGTTCEEEECSCBC-CCTTEEEEEEECGGGGGGGGGCC
T ss_pred ccCCcEEEeCCCccccccEeeEEcccCC-CCCCeeEEEEECHHHHHHHHhcC
Confidence 3589999999765556678999999987 678899999999 4667777765
No 41
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=20.34 E-value=61 Score=28.35 Aligned_cols=50 Identities=12% Similarity=0.147 Sum_probs=41.2
Q ss_pred CCceEEEeeecCCCCCcceeEEEccCCCCCCCCccEEEEEE-cCHHHHHHHH
Q 027222 153 TGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVL-SGMDVVRKIE 203 (226)
Q Consensus 153 ~~~G~l~~~~~~~~~~~sqF~I~l~~~~~Ld~~~~VFGrVi-~G~~vl~~I~ 203 (226)
.++|.|.+.|..-..-..|.-|++.+.| -|++.-|+|+|. +-+.+|+-|.
T Consensus 300 r~rGdItIdN~~ygrY~GElQI~l~dlp-~d~r~NVVG~I~~edl~LLd~I~ 350 (372)
T 2p0o_A 300 RPVGTVTIDNEKYGRYMGEIQVTLVDLP-KDEKVNTITRIIDKDQTILPLIK 350 (372)
T ss_dssp BCTTEEEEECGGGGGGTTCEEEESSCBC-CCTTEEEEEEBCGGGGGGGGGCC
T ss_pred ccCCeEEEeCCCccccccEeeEEcccCC-CCCCeEEEEEECHHHHHHHHhcC
Confidence 3589999999765556678999999998 688899999999 5677888775
Done!