BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>027224
MEENDCDSWEKASDNEDSYVDEIDEEDYYMSGFISKLQFRKDISKAHWNNELGMAEVVEK
KGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSW
ELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQVTPKRHGVMDVEPKEES
SLVALFYNIQINEVRPVFDVYLPNRKFKKSCPGDPSFLLYLTCKYV

High Scoring Gene Products

Symbol, full name Information P value
AT3G57360 protein from Arabidopsis thaliana 1.2e-51
tsen54
tRNA splicing endonuclease 54 homolog (S. cerevisiae)
gene_product from Danio rerio 7.8e-11
TSEN54
Uncharacterized protein
protein from Bos taurus 1.8e-10
Tsen54
tRNA splicing endonuclease 54 homolog (S. cerevisiae)
protein from Mus musculus 2.8e-10
Tsen54
tRNA splicing endonuclease 54 homolog (S. cerevisiae)
gene from Rattus norvegicus 2.8e-10
TSEN54
tRNA-splicing endonuclease subunit Sen54
protein from Homo sapiens 6.8e-10
TSEN54
Uncharacterized protein
protein from Canis lupus familiaris 6.9e-10
TSEN54
Uncharacterized protein
protein from Gallus gallus 7.2e-10
CG5626 protein from Drosophila melanogaster 6.0e-09

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  027224
        (226 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2082553 - symbol:AT3G57360 "AT3G57360" species...   536  1.2e-51   1
ZFIN|ZDB-GENE-050522-454 - symbol:tsen54 "tRNA splicing e...   155  7.8e-11   2
UNIPROTKB|E1BJ21 - symbol:TSEN54 "Uncharacterized protein...   163  1.8e-10   1
MGI|MGI:1923515 - symbol:Tsen54 "tRNA splicing endonuclea...   162  2.8e-10   1
RGD|1597379 - symbol:Tsen54 "tRNA splicing endonuclease 5...   162  2.8e-10   1
UNIPROTKB|Q7Z6J9 - symbol:TSEN54 "tRNA-splicing endonucle...   160  6.8e-10   1
UNIPROTKB|E2RAR4 - symbol:TSEN54 "Uncharacterized protein...   160  6.9e-10   1
UNIPROTKB|F1N9B2 - symbol:TSEN54 "Uncharacterized protein...   153  7.2e-10   2
FB|FBgn0036266 - symbol:CG5626 species:7227 "Drosophila m...   125  6.0e-09   2


>TAIR|locus:2082553 [details] [associations]
            symbol:AT3G57360 "AT3G57360" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002686 GenomeReviews:BA000014_GR KO:K15326
            InterPro:IPR024336 Pfam:PF12928 EMBL:BT014989 EMBL:BT015676
            IPI:IPI00539686 RefSeq:NP_191295.4 UniGene:At.34839
            ProteinModelPortal:Q6DBN3 SMR:Q6DBN3 PRIDE:Q6DBN3 DNASU:824903
            EnsemblPlants:AT3G57360.1 GeneID:824903 KEGG:ath:AT3G57360
            TAIR:At3g57360 eggNOG:NOG267210 HOGENOM:HOG000070618 OMA:SACAGEC
            PhylomeDB:Q6DBN3 ProtClustDB:CLSN2681551 Genevestigator:Q6DBN3
            Uniprot:Q6DBN3
        Length = 254

 Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
 Identities = 109/222 (49%), Positives = 150/222 (67%)

Query:     1 MEENDCDSWEKASDNEDSYVDEIDEEDYYMSGFISKLQFRKDISKAHWNNELGMAEVVEK 60
             MEE D ++   +S+NE  + ++ D+E+++  G + KLQFR   SKA W  ELGMAEV  K
Sbjct:     1 MEEKDWEA-SSSSENEGGFPND-DDEEFHSGGSVPKLQFRVGSSKARWITELGMAEVEVK 58

Query:    61 KGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDN-NDLCLPLKEIYEKIANEKSGCS 119
             +GK+WTTTGI+R+GKTYC IEE L+L+EIG L +L N +D+ +PLK++YEKIA EKSGCS
Sbjct:    59 RGKLWTTTGIIRSGKTYCFIEEALYLSEIGELQILGNEDDIVIPLKDLYEKIAEEKSGCS 118

Query:   120 WELFEVYRHLKSLGYIVGRHGVPWIVKI---PKGRDINITSDPVSLQVTPKRHGVMDVEP 176
             WE +EVYR+LK LGYI+GRHGV W +K    P G + +  +                  P
Sbjct:   119 WENYEVYRYLKGLGYILGRHGVSWTLKDAARPNGEEESACAGEC---------------P 163

Query:   177 KEESSLVALFYNIQINEVRPVFDVYLPNRKFKKSCPGDPSFL 218
              +  ++  L  ++QI + + VFDVYLPN +FKKS PG+PSF+
Sbjct:   164 ADNDTVTKLLGDMQICDAKAVFDVYLPNSRFKKSSPGEPSFV 205


>ZFIN|ZDB-GENE-050522-454 [details] [associations]
            symbol:tsen54 "tRNA splicing endonuclease 54
            homolog (S. cerevisiae)" species:7955 "Danio rerio" [GO:0045211
            "postsynaptic membrane" evidence=IEA] [GO:0006810 "transport"
            evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016021
            "integral to membrane" evidence=IEA] [GO:0005230 "extracellular
            ligand-gated ion channel activity" evidence=IEA] [GO:0016020
            "membrane" evidence=IEA] [GO:0048854 "brain morphogenesis"
            evidence=IMP] InterPro:IPR006029 InterPro:IPR006201
            InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
            PRINTS:PR00252 PROSITE:PS00236 ZFIN:ZDB-GENE-050522-454
            GO:GO:0016021 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
            SUPFAM:SSF90112 SUPFAM:SSF63712 GO:GO:0048854 InterPro:IPR024337
            InterPro:IPR024336 PANTHER:PTHR21027 Pfam:PF12928
            GeneTree:ENSGT00390000004214 EMBL:CABZ01087516 EMBL:CABZ01087517
            EMBL:CABZ01087518 EMBL:CABZ01087519 EMBL:CABZ01087520
            EMBL:CABZ01087521 IPI:IPI00935059 Ensembl:ENSDART00000113247
            Bgee:E7FCP2 Uniprot:E7FCP2
        Length = 891

 Score = 155 (59.6 bits), Expect = 7.8e-11, Sum P(2) = 7.8e-11
 Identities = 41/128 (32%), Positives = 63/128 (49%)

Query:    42 DISKAHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLC 101
             ++  A W+ E  + E+    GK W T G    GK Y   EE L+L E G + +    DL 
Sbjct:    77 NLVNAVWSPEEKLVELQSPAGKFWQTMGFSERGKQYLQPEEALYLMECGNVQVF-YRDLP 135

Query:   102 LPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINI-TSDPV 160
             L +++ YE+  +  +  +   ++V+ HLK LGY+V R   P  V     R +N+  SD  
Sbjct:   136 LSIQDGYERFLSSDT-VTLHQYQVFGHLKRLGYVVNRFD-PSSVSSTYERQLNLPASDKQ 193

Query:   161 SLQVTPKR 168
               Q+  KR
Sbjct:   194 KKQLKRKR 201

 Score = 55 (24.4 bits), Expect = 7.8e-11, Sum P(2) = 7.8e-11
 Identities = 13/30 (43%), Positives = 17/30 (56%)

Query:   198 FDVYLPNR--KFKKSCPGDPSFLLYLTCKY 225
             FDVY P+   +FKKS PG P +     C +
Sbjct:   424 FDVYQPDTVAEFKKSHPGKP-YTRMCVCSF 452


>UNIPROTKB|E1BJ21 [details] [associations]
            symbol:TSEN54 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0006388 "tRNA splicing, via endonucleolytic cleavage
            and ligation" evidence=IEA] GO:GO:0006388 CTD:283989 KO:K15326
            OMA:QISFPNM InterPro:IPR024337 InterPro:IPR024336 PANTHER:PTHR21027
            Pfam:PF12928 GeneTree:ENSGT00390000004214 EMBL:DAAA02049521
            IPI:IPI00705093 RefSeq:NP_001192620.1 UniGene:Bt.58475
            Ensembl:ENSBTAT00000001090 GeneID:511091 KEGG:bta:511091
            NextBio:20869773 Uniprot:E1BJ21
        Length = 528

 Score = 163 (62.4 bits), Expect = 1.8e-10, P = 1.8e-10
 Identities = 41/123 (33%), Positives = 61/123 (49%)

Query:    46 AHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLK 105
             A W  E G  E+    GK W T G    G+     EE L+L E G++ L  + DL L ++
Sbjct:    80 AEWRPEEGFVELKSPAGKFWQTMGFSEQGRQRLHPEEALYLLECGSIQLF-HQDLPLSIQ 138

Query:   106 EIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQVT 165
             E Y+ +  E +  ++  ++V+ HLK LGY+V R   P  V  P  R +N+      L+  
Sbjct:   139 EAYQLLLTEDT-VTFLQYQVFSHLKRLGYVVRRFQ-PSSVLSPYERQLNLDGGAQCLEGK 196

Query:   166 PKR 168
              KR
Sbjct:   197 RKR 199


>MGI|MGI:1923515 [details] [associations]
            symbol:Tsen54 "tRNA splicing endonuclease 54 homolog (S.
            cerevisiae)" species:10090 "Mus musculus" [GO:0003674
            "molecular_function" evidence=ND] [GO:0004519 "endonuclease
            activity" evidence=IEA] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0006388 "tRNA
            splicing, via endonucleolytic cleavage and ligation" evidence=ISO]
            [GO:0006397 "mRNA processing" evidence=IEA] [GO:0008033 "tRNA
            processing" evidence=IEA] MGI:MGI:1923515 GO:GO:0005730
            GO:GO:0006397 GO:GO:0006388 EMBL:AL645852 CTD:283989
            eggNOG:NOG327149 HOGENOM:HOG000049169 HOVERGEN:HBG061211 KO:K15326
            OMA:QISFPNM OrthoDB:EOG4XKV79 ChiTaRS:TSEN54 InterPro:IPR024337
            InterPro:IPR024336 PANTHER:PTHR21027 Pfam:PF12928 EMBL:AK002758
            EMBL:AK089005 IPI:IPI00120951 IPI:IPI00454154 RefSeq:NP_083833.1
            UniGene:Mm.275438 ProteinModelPortal:Q8C2A2 SMR:Q8C2A2
            STRING:Q8C2A2 PhosphoSite:Q8C2A2 PRIDE:Q8C2A2
            Ensembl:ENSMUST00000021134 Ensembl:ENSMUST00000106481 GeneID:76265
            KEGG:mmu:76265 UCSC:uc007miq.1 UCSC:uc011yhp.1
            GeneTree:ENSGT00390000004214 InParanoid:B1ATA4 NextBio:344883
            Bgee:Q8C2A2 Genevestigator:Q8C2A2 GermOnline:ENSMUSG00000020781
            Uniprot:Q8C2A2
        Length = 525

 Score = 162 (62.1 bits), Expect = 2.8e-10, P = 2.8e-10
 Identities = 38/110 (34%), Positives = 57/110 (51%)

Query:    46 AHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLK 105
             A W  E G  E+    GK W T G    G+     EE L+L E G++ L    DL L ++
Sbjct:    80 AEWKPEEGFVELTSPAGKFWQTMGYSEEGRQRLHPEEALYLLECGSIQLF-YQDLPLSIQ 138

Query:   106 EIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINI 155
             E Y+ +  E +  S+  ++V+ HLK LGY+V R  +  +V  P  R +N+
Sbjct:   139 EAYQLLLTEDT-LSFLQYQVFSHLKRLGYVVRRFQLSSVVS-PYERQLNL 186


>RGD|1597379 [details] [associations]
            symbol:Tsen54 "tRNA splicing endonuclease 54 homolog (S.
            cerevisiae)" species:10116 "Rattus norvegicus" [GO:0006388 "tRNA
            splicing, via endonucleolytic cleavage and ligation"
            evidence=IEA;ISO] RGD:1597379 EMBL:CH473948 GO:GO:0006388
            CTD:283989 KO:K15326 OMA:QISFPNM OrthoDB:EOG4XKV79
            InterPro:IPR024337 InterPro:IPR024336 PANTHER:PTHR21027
            Pfam:PF12928 GeneTree:ENSGT00390000004214 IPI:IPI00207585
            RefSeq:NP_001103046.1 UniGene:Rn.198903 Ensembl:ENSRNOT00000006327
            GeneID:690308 KEGG:rno:690308 NextBio:740625 Uniprot:D3ZZT6
        Length = 525

 Score = 162 (62.1 bits), Expect = 2.8e-10, P = 2.8e-10
 Identities = 38/110 (34%), Positives = 57/110 (51%)

Query:    46 AHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLK 105
             A W  E G  E+    GK W T G    G+     EE L+L E G++ L    DL L ++
Sbjct:    80 AEWRPEEGFVELTSPAGKFWQTMGYSEEGRQRLHPEEALYLLECGSIQLF-YQDLPLSIQ 138

Query:   106 EIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINI 155
             E Y+ +  E +  S+  ++V+ HLK LGY+V R  +  +V  P  R +N+
Sbjct:   139 EAYQLLLTEDT-LSFLQYQVFSHLKRLGYVVRRFQLSSVVS-PYERQLNL 186


>UNIPROTKB|Q7Z6J9 [details] [associations]
            symbol:TSEN54 "tRNA-splicing endonuclease subunit Sen54"
            species:9606 "Homo sapiens" [GO:0006397 "mRNA processing"
            evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0006388
            "tRNA splicing, via endonucleolytic cleavage and ligation"
            evidence=IDA] GO:GO:0005730 GO:GO:0006397 GO:GO:0006388
            EMBL:AC100787 Orphanet:2524 EMBL:AK094466 EMBL:BC047793
            EMBL:BC053643 IPI:IPI00329143 IPI:IPI00429119 RefSeq:NP_997229.2
            UniGene:Hs.378501 ProteinModelPortal:Q7Z6J9 SMR:Q7Z6J9
            IntAct:Q7Z6J9 STRING:Q7Z6J9 PhosphoSite:Q7Z6J9 DMDM:296452961
            PaxDb:Q7Z6J9 PRIDE:Q7Z6J9 Ensembl:ENST00000333213 GeneID:283989
            KEGG:hsa:283989 UCSC:uc002joe.1 UCSC:uc002jof.1 CTD:283989
            GeneCards:GC17P073512 H-InvDB:HIX0022516 HGNC:HGNC:27561 MIM:225753
            MIM:277470 MIM:608755 neXtProt:NX_Q7Z6J9 Orphanet:166063
            Orphanet:166068 PharmGKB:PA142670692 eggNOG:NOG327149
            HOGENOM:HOG000049169 HOVERGEN:HBG061211 InParanoid:Q7Z6J9 KO:K15326
            OMA:QISFPNM OrthoDB:EOG4XKV79 PhylomeDB:Q7Z6J9 ChiTaRS:TSEN54
            GenomeRNAi:283989 NextBio:94415 ArrayExpress:Q7Z6J9 Bgee:Q7Z6J9
            CleanEx:HS_TSEN54 Genevestigator:Q7Z6J9 GermOnline:ENSG00000182173
            InterPro:IPR024337 InterPro:IPR024336 PANTHER:PTHR21027
            Pfam:PF12928 Uniprot:Q7Z6J9
        Length = 526

 Score = 160 (61.4 bits), Expect = 6.8e-10, P = 6.8e-10
 Identities = 38/118 (32%), Positives = 61/118 (51%)

Query:    46 AHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLK 105
             A W  E G  E+    GK W T G    G+     EE L+L E G+++L  + DL L ++
Sbjct:    80 AEWRPEEGFVELKSPAGKFWQTMGFSEQGRQRLHPEEALYLLECGSIHLF-HQDLPLSIQ 138

Query:   106 EIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQ 163
             E Y+ +  + +  ++  ++V+ HLK LGY+V R   P  V  P  R +N+ +    L+
Sbjct:   139 EAYQLLLTDHT-VTFLQYQVFSHLKRLGYVVRRFQ-PSSVLSPYERQLNLDASVQHLE 194


>UNIPROTKB|E2RAR4 [details] [associations]
            symbol:TSEN54 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006388 "tRNA splicing, via endonucleolytic
            cleavage and ligation" evidence=IEA] GO:GO:0006388 CTD:283989
            KO:K15326 OMA:QISFPNM InterPro:IPR024337 InterPro:IPR024336
            PANTHER:PTHR21027 Pfam:PF12928 GeneTree:ENSGT00390000004214
            EMBL:AAEX03006297 RefSeq:XP_540434.3 Ensembl:ENSCAFT00000007733
            GeneID:483315 KEGG:cfa:483315 Uniprot:E2RAR4
        Length = 531

 Score = 160 (61.4 bits), Expect = 6.9e-10, P = 6.9e-10
 Identities = 38/118 (32%), Positives = 59/118 (50%)

Query:    46 AHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLK 105
             A W  E G  E+    GK W T G    G+     EE L+L E G++ L  + DL L ++
Sbjct:    80 AEWRPEEGFVELKSPAGKFWQTMGFSEQGRQRLHPEEALYLLECGSIQLF-HQDLPLSIQ 138

Query:   106 EIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQ 163
             E Y+ +  E +  ++  ++V+ HLK LGY+V R   P  +  P  R +N+      L+
Sbjct:   139 EAYQLLLTEDA-VTFLQYQVFSHLKRLGYVVRRFQ-PGSILSPYERQLNLDGSAQCLE 194


>UNIPROTKB|F1N9B2 [details] [associations]
            symbol:TSEN54 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0006388 "tRNA splicing, via endonucleolytic
            cleavage and ligation" evidence=IEA] GO:GO:0006388 OMA:QISFPNM
            InterPro:IPR024337 InterPro:IPR024336 PANTHER:PTHR21027
            Pfam:PF12928 GeneTree:ENSGT00390000004214 EMBL:AADN02053664
            IPI:IPI00604251 Ensembl:ENSGALT00000013049 Uniprot:F1N9B2
        Length = 530

 Score = 153 (58.9 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
 Identities = 39/116 (33%), Positives = 61/116 (52%)

Query:    42 DISKAHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLC 101
             ++ KA W  E  + E+    GK W T G    GK     EE L+L E G+L L    D+ 
Sbjct:    75 NLVKAVWKPEQSVVELESPAGKFWHTMGFSERGKQCLLPEEALYLLECGSLQLF-YKDVP 133

Query:   102 LPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITS 157
             + ++E YE + ++++  +   ++V+ HLK LG+IV R   P  V  P  R +N+ S
Sbjct:   134 MSVREAYEILLSQEA-MNLLHYQVFSHLKQLGFIVLRFN-PSTVLSPYERQLNLES 187

 Score = 43 (20.2 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
 Identities = 10/27 (37%), Positives = 16/27 (59%)

Query:   191 INEVRPVFDVYLPNR--KFKKSCPGDP 215
             +  ++  F+VY  +   KFKK+ PG P
Sbjct:   447 LESIKIDFNVYQADAVAKFKKTNPGKP 473


>FB|FBgn0036266 [details] [associations]
            symbol:CG5626 species:7227 "Drosophila melanogaster"
            [GO:0004017 "adenylate kinase activity" evidence=ISS] EMBL:AE014296
            GO:GO:0004017 GO:GO:0000213 KO:K15326 InterPro:IPR024337
            InterPro:IPR024336 PANTHER:PTHR21027 Pfam:PF12928
            GeneTree:ENSGT00390000004214 RefSeq:NP_648559.1 UniGene:Dm.15357
            ProteinModelPortal:Q9VTV4 SMR:Q9VTV4 IntAct:Q9VTV4 MINT:MINT-847890
            PaxDb:Q9VTV4 EnsemblMetazoa:FBtr0076016 GeneID:39397
            KEGG:dme:Dmel_CG5626 UCSC:CG5626-RA FlyBase:FBgn0036266
            eggNOG:NOG289123 InParanoid:Q9VTV4 OMA:KLYLEYY OrthoDB:EOG4STQM0
            PhylomeDB:Q9VTV4 GenomeRNAi:39397 NextBio:813441
            ArrayExpress:Q9VTV4 Bgee:Q9VTV4 Uniprot:Q9VTV4
        Length = 383

 Score = 125 (49.1 bits), Expect = 6.0e-09, Sum P(2) = 6.0e-09
 Identities = 41/136 (30%), Positives = 64/136 (47%)

Query:    11 KASDNEDSY--VDEIDEEDYYMSGFIS--KLQFRKDISKAHWNNELGMAEVVEKKGKMWT 66
             K + NE +   V+E+     Y+   +S  +++     + A WN E  +AEV  K GK + 
Sbjct:    41 KRTKNEGTAAEVEELKRAQEYLRAQLSVPRIERLGGRALAIWNEEQQVAEVKRKDGK-FE 99

Query:    67 TTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVY 126
               G    GK Y    E +FL E+G L L +   L + +++ Y  +  E     +  + VY
Sbjct:   100 NFGYSEQGKLYLEYYEAMFLLEVGRLQL-EYCGLVVSIEQAYVLLLGELESERYTNYLVY 158

Query:   127 RHLKSLGYIVGRHGVP 142
               L   GYIV +H VP
Sbjct:   159 SALSRSGYIVVKH-VP 173

 Score = 68 (29.0 bits), Expect = 6.0e-09, Sum P(2) = 6.0e-09
 Identities = 12/21 (57%), Positives = 16/21 (76%)

Query:   197 VFDVYLPNRKFKKSCPGDPSF 217
             +FD++L NR FKKS P  P+F
Sbjct:   316 IFDLHLHNRGFKKSAPNAPNF 336


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.137   0.421    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      226       226   0.00078  113 3  11 22  0.43    33
                                                     32  0.41    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  9
  No. of states in DFA:  613 (65 KB)
  Total size of DFA:  211 KB (2117 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  21.96u 0.12s 22.08t   Elapsed:  00:00:01
  Total cpu time:  21.96u 0.12s 22.08t   Elapsed:  00:00:01
  Start:  Fri May 10 05:25:43 2013   End:  Fri May 10 05:25:44 2013

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