BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027224
(226 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224134699|ref|XP_002327468.1| predicted protein [Populus trichocarpa]
gi|222836022|gb|EEE74443.1| predicted protein [Populus trichocarpa]
Length = 283
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 127/216 (58%), Positives = 162/216 (75%), Gaps = 7/216 (3%)
Query: 7 DSWEKASDNEDSYVDEIDEEDYY-MSGFISKLQFRKDISKAHWNNELGMAEVVEKKGKMW 65
D WE +S E + D+ ++ED+Y S +SKLQFR D+SKA WN E+GMAEV+EKKGKMW
Sbjct: 5 DDWESSS-GEVTDTDQFNDEDFYSTSACLSKLQFRNDVSKAKWNVEMGMAEVIEKKGKMW 63
Query: 66 TTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEV 125
TTGIVRNGKT+C IEETLFLAEIGAL ++D+ND CL LK+I++K++ E++GCSWELFEV
Sbjct: 64 ITTGIVRNGKTFCLIEETLFLAEIGALLVMDDNDECLALKDIHKKMSEERNGCSWELFEV 123
Query: 126 YRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQVTPKRHGVMDVEPKEESSLVAL 185
Y+HLKSLGY+VGRHGVPW +K + S P S Q T + + V VE + V +
Sbjct: 124 YKHLKSLGYVVGRHGVPWSMK-----GVENNSKPCSSQGTIQNNRVEGVEENSITCAVQM 178
Query: 186 FYNIQINEVRPVFDVYLPNRKFKKSCPGDPSFLLYL 221
N+Q++E+R FDVYLPN KF+KS PGDP+FLL L
Sbjct: 179 LSNLQVDELRLNFDVYLPNSKFRKSSPGDPAFLLCL 214
>gi|147790314|emb|CAN74373.1| hypothetical protein VITISV_010199 [Vitis vinifera]
Length = 1843
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 125/212 (58%), Positives = 153/212 (72%), Gaps = 8/212 (3%)
Query: 12 ASDNEDSYVDEIDEED-YYMSGFISKLQFRKDISKAHWNNELGMAEVVEKKGKMWTTTGI 70
ASD+E D DEE+ YY S ISKLQFRKD+SKA WN+ + MAEVVE KGKMWTTTG+
Sbjct: 1034 ASDSEIYLQDANDEEEHYYTSSSISKLQFRKDVSKAIWNDAMRMAEVVEMKGKMWTTTGM 1093
Query: 71 VRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLK 130
+ +GK YCSIEETLFLAE+GAL+LLD+ D+ + LK IY+K++ K GC WE FE YRHLK
Sbjct: 1094 LHSGKIYCSIEETLFLAELGALHLLDDXDVPISLKGIYDKVSQGKCGCCWESFEAYRHLK 1153
Query: 131 SLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQVTPKRHGVMDVEPKEESSLVALFYNIQ 190
SLGYIVGRHG+PW KG + S Q TP+ + D +EE+S + L N+
Sbjct: 1154 SLGYIVGRHGIPW---TSKGXKTCLDSH----QGTPEGNSRTDXGSEEENSTIELVNNMH 1206
Query: 191 INEVRPVFDVYLPNRKFKKSCPGDPSFLLYLT 222
I EV+ +FDVYLPN KF+KS PGDPSF+L LT
Sbjct: 1207 ITEVKLLFDVYLPNSKFRKSSPGDPSFVLCLT 1238
>gi|297739626|emb|CBI29808.3| unnamed protein product [Vitis vinifera]
Length = 281
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 126/212 (59%), Positives = 154/212 (72%), Gaps = 8/212 (3%)
Query: 12 ASDNEDSYVDEIDEED-YYMSGFISKLQFRKDISKAHWNNELGMAEVVEKKGKMWTTTGI 70
ASD+E D DEE+ YY S ISKLQFRKD+SKA WN+ + MAEVVE KGKMWTTTG+
Sbjct: 31 ASDSEIYLQDANDEEEHYYTSSSISKLQFRKDVSKAIWNDAMRMAEVVEMKGKMWTTTGM 90
Query: 71 VRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLK 130
+ +GK YCSIEETLFLAE+GAL+LLD+ND+ + LK IY+K++ K GC WE FE YRHLK
Sbjct: 91 LHSGKIYCSIEETLFLAELGALHLLDDNDVPISLKGIYDKVSQGKCGCCWESFEAYRHLK 150
Query: 131 SLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQVTPKRHGVMDVEPKEESSLVALFYNIQ 190
SLGYIVGRHG+PW KG + S Q TP+ + D +EE+S + L N+
Sbjct: 151 SLGYIVGRHGIPW---TSKGAKTCLDSH----QGTPEGNSRTDEGSEEENSTIELVNNMH 203
Query: 191 INEVRPVFDVYLPNRKFKKSCPGDPSFLLYLT 222
I EV+ +FDVYLPN KF+KS PGDPSF+L LT
Sbjct: 204 ITEVKLLFDVYLPNSKFRKSSPGDPSFVLCLT 235
>gi|225441894|ref|XP_002284389.1| PREDICTED: uncharacterized protein LOC100257347 [Vitis vinifera]
Length = 255
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 126/212 (59%), Positives = 154/212 (72%), Gaps = 8/212 (3%)
Query: 12 ASDNEDSYVDEIDEED-YYMSGFISKLQFRKDISKAHWNNELGMAEVVEKKGKMWTTTGI 70
ASD+E D DEE+ YY S ISKLQFRKD+SKA WN+ + MAEVVE KGKMWTTTG+
Sbjct: 5 ASDSEIYLQDANDEEEHYYTSSSISKLQFRKDVSKAIWNDAMRMAEVVEMKGKMWTTTGM 64
Query: 71 VRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLK 130
+ +GK YCSIEETLFLAE+GAL+LLD+ND+ + LK IY+K++ K GC WE FE YRHLK
Sbjct: 65 LHSGKIYCSIEETLFLAELGALHLLDDNDVPISLKGIYDKVSQGKCGCCWESFEAYRHLK 124
Query: 131 SLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQVTPKRHGVMDVEPKEESSLVALFYNIQ 190
SLGYIVGRHG+PW KG + S Q TP+ + D +EE+S + L N+
Sbjct: 125 SLGYIVGRHGIPW---TSKGAKTCLDSH----QGTPEGNSRTDEGSEEENSTIELVNNMH 177
Query: 191 INEVRPVFDVYLPNRKFKKSCPGDPSFLLYLT 222
I EV+ +FDVYLPN KF+KS PGDPSF+L LT
Sbjct: 178 ITEVKLLFDVYLPNSKFRKSSPGDPSFVLCLT 209
>gi|255572755|ref|XP_002527310.1| conserved hypothetical protein [Ricinus communis]
gi|223533310|gb|EEF35062.1| conserved hypothetical protein [Ricinus communis]
Length = 261
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 125/219 (57%), Positives = 155/219 (70%), Gaps = 12/219 (5%)
Query: 7 DSWEKASD--NEDSYVDEI-DEEDYYMSGFISKLQFRKDISKAHWNNELGMAEVVEKKGK 63
+ WE +S N+ + + I DEE Y + KLQFR DISKA WN E+GMAE+VEKKGK
Sbjct: 4 EDWETSSSELNDTTAIGAIKDEELYCTLESLPKLQFRSDISKARWNAEMGMAELVEKKGK 63
Query: 64 MWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELF 123
+WT TGI R+GKTYCSIEETLFLAE+GAL L+D+ CL LK++Y K+ +KSGC ELF
Sbjct: 64 LWTNTGIARSGKTYCSIEETLFLAELGALVLMDDEGTCLSLKDLYGKMGYQKSGCCSELF 123
Query: 124 EVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQVTPKRHG-VMDVEPKEESSL 182
EVYRHLKSLGYIVGRHGVPW + KG SD T + +G V+D E KE +S+
Sbjct: 124 EVYRHLKSLGYIVGRHGVPWSM---KGVKSTCQSDS-----THENNGVVIDNEVKETASI 175
Query: 183 VALFYNIQINEVRPVFDVYLPNRKFKKSCPGDPSFLLYL 221
V N+Q++E+R FDVYLPN KF+KS PG+P+F L L
Sbjct: 176 VQRLRNLQVDELRLDFDVYLPNSKFRKSSPGEPAFFLCL 214
>gi|449449845|ref|XP_004142675.1| PREDICTED: uncharacterized protein LOC101210680 [Cucumis sativus]
gi|449525862|ref|XP_004169935.1| PREDICTED: uncharacterized LOC101210680 [Cucumis sativus]
Length = 267
Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 116/227 (51%), Positives = 160/227 (70%), Gaps = 16/227 (7%)
Query: 8 SWEKASD------NEDSYVDEIDEEDYYMS--GFISKLQFRKDISKAHWNNELGMAEVVE 59
+WE +S +ED+Y +I++E+ +S G + KLQFRK S A WN+++GMAEV+E
Sbjct: 5 NWESSSGGASDTGDEDNYEQDINDEEECLSASGCLRKLQFRKHASTARWNDQMGMAEVLE 64
Query: 60 KKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCS 119
KG +WTTTGIVR GK YCSIEETLFL E+GAL+LLD+++ L LK++Y+K+A +SG
Sbjct: 65 NKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDHDNSSLSLKDVYKKVAEGRSGRL 124
Query: 120 WELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSD-PVSLQVTPKRHGVMDVEPKE 178
WE FEVYRHLKSLGYIVG+H VPW +K N+ +D +S + + G DV+ +
Sbjct: 125 WEQFEVYRHLKSLGYIVGKHRVPWSLK-------NVRNDCDISSPSSTENKGASDVKSDD 177
Query: 179 ESSLVALFYNIQINEVRPVFDVYLPNRKFKKSCPGDPSFLLYLTCKY 225
E S+ L IQ++EV P+FDV+LP+ KF+KS PGDP+F++ LT Y
Sbjct: 178 EQSICRLLNAIQLDEVTPIFDVFLPHNKFRKSSPGDPNFMVCLTRGY 224
>gi|356503431|ref|XP_003520512.1| PREDICTED: uncharacterized protein LOC100811412 [Glycine max]
Length = 264
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 106/191 (55%), Positives = 138/191 (72%), Gaps = 7/191 (3%)
Query: 34 ISKLQFRKDISKAHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALY 93
+ KLQFR SK WN E+GM +++EK GKMW TTGIVR+GK Y SIEETL+L E+GAL
Sbjct: 4 MPKLQFRNVKSKGCWNEEVGMGDIIEKNGKMWVTTGIVRSGKIYSSIEETLYLMELGALD 63
Query: 94 LLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDI 153
LLDN + L E YEK+A+ KSGC WELF+VYRHLKS+GYI+GRHGV W +K I
Sbjct: 64 LLDNGGRSISLTETYEKVASGKSGCCWELFDVYRHLKSIGYIIGRHGVAWSLK-----SI 118
Query: 154 NITSDPVSLQVTPKRHGVMDVEPKEESSL--VALFYNIQINEVRPVFDVYLPNRKFKKSC 211
+ + + L+ + + D++ K E S+ + LF +Q+N++RP FDVYLPN +F+KSC
Sbjct: 119 KVPINLLLLKSQKEIEQLEDIDSKSELSINELWLFGEMQVNDLRPDFDVYLPNSRFRKSC 178
Query: 212 PGDPSFLLYLT 222
PGDPSFLLYL+
Sbjct: 179 PGDPSFLLYLS 189
>gi|356570446|ref|XP_003553398.1| PREDICTED: uncharacterized protein LOC100782940 [Glycine max]
Length = 272
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 114/222 (51%), Positives = 145/222 (65%), Gaps = 7/222 (3%)
Query: 6 CDSWEKASDNEDSYVDEIDEEDYY--MSGFISKLQFRKDISKAHWNNELGMAEVVEKKGK 63
C S E + D + Y+ +ED SG + KLQFR SK WN E+GM EV+EK GK
Sbjct: 8 CSSSEDSDD--EVYLQNASDEDELGSSSGSMPKLQFRNMKSKGCWNEEMGMGEVIEKNGK 65
Query: 64 MWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELF 123
MW TTGIVR+GK Y SIEETL+L E+GAL+L+DN + L E+YEK+A+ KSGC WELF
Sbjct: 66 MWVTTGIVRSGKIYSSIEETLYLMELGALHLVDNGGRSISLTEMYEKVASGKSGCCWELF 125
Query: 124 EVYRHLKSLGYIVGRHGVPWIVK--IPKGRDINITSDPVSLQVTPKRHGVMDVEPKEESS 181
EVYRHLKSLGYI+G HGV W +K I + + + D + + + S
Sbjct: 126 EVYRHLKSLGYIIGCHGVAWSLKKIIGEHKKSHRQHDFAHSNKSISHFSFLTNAFRALVS 185
Query: 182 LV-ALFYNIQINEVRPVFDVYLPNRKFKKSCPGDPSFLLYLT 222
+ LF +QIN++RP FDVYLPN +F+KS PGDPSFLLYL+
Sbjct: 186 ICHKLFGKLQINDLRPDFDVYLPNSRFRKSSPGDPSFLLYLS 227
>gi|240255663|ref|NP_191295.4| uncharacterized protein [Arabidopsis thaliana]
gi|50198814|gb|AAT70440.1| At3g57360 [Arabidopsis thaliana]
gi|51972142|gb|AAU15175.1| At3g57360 [Arabidopsis thaliana]
gi|332646125|gb|AEE79646.1| uncharacterized protein [Arabidopsis thaliana]
Length = 254
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 111/224 (49%), Positives = 150/224 (66%), Gaps = 25/224 (11%)
Query: 1 MEENDCDSWE--KASDNEDSYVDEIDEEDYYMSGFISKLQFRKDISKAHWNNELGMAEVV 58
MEE D WE +S+NE + ++ D+E+++ G + KLQFR SKA W ELGMAEV
Sbjct: 1 MEEKD---WEASSSSENEGGFPND-DDEEFHSGGSVPKLQFRVGSSKARWITELGMAEVE 56
Query: 59 EKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDN-NDLCLPLKEIYEKIANEKSG 117
K+GK+WTTTGI+R+GKTYC IEE L+L+EIG L +L N +D+ +PLK++YEKIA EKSG
Sbjct: 57 VKRGKLWTTTGIIRSGKTYCFIEEALYLSEIGELQILGNEDDIVIPLKDLYEKIAEEKSG 116
Query: 118 CSWELFEVYRHLKSLGYIVGRHGVPWIVK---IPKGRDINITSDPVSLQVTPKRHGVMDV 174
CSWE +EVYR+LK LGYI+GRHGV W +K P G + + +
Sbjct: 117 CSWENYEVYRYLKGLGYILGRHGVSWTLKDAARPNGEEESACAGEC-------------- 162
Query: 175 EPKEESSLVALFYNIQINEVRPVFDVYLPNRKFKKSCPGDPSFL 218
P + ++ L ++QI + + VFDVYLPN +FKKS PG+PSF+
Sbjct: 163 -PADNDTVTKLLGDMQICDAKAVFDVYLPNSRFKKSSPGEPSFV 205
>gi|297817060|ref|XP_002876413.1| At3g57360 [Arabidopsis lyrata subsp. lyrata]
gi|297322251|gb|EFH52672.1| At3g57360 [Arabidopsis lyrata subsp. lyrata]
Length = 256
Score = 202 bits (515), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 109/221 (49%), Positives = 150/221 (67%), Gaps = 17/221 (7%)
Query: 1 MEENDCDSWE--KASDNEDSYVDEIDEEDYYMSGFISKLQFRKDISKAHWNNELGMAEVV 58
MEE D WE +SDNE + ++ D+E+++ G + KLQFR SKA W ELGMAEV
Sbjct: 1 MEEKD---WEVSSSSDNEAGFPND-DDEEFHSGGSVPKLQFRVGSSKARWMAELGMAEVE 56
Query: 59 EKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDN-NDLCLPLKEIYEKIANEKSG 117
K+GK+WTTTGI+R+GKTYC IEE L+L+EIG L +L N +D+ +PLK++YEK+A EKSG
Sbjct: 57 VKRGKLWTTTGIIRSGKTYCFIEEALYLSEIGELQILSNEDDIVIPLKDLYEKMAEEKSG 116
Query: 118 CSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQVTPKRHGVMDVEPK 177
CSW+ +EVYR+LK LGYI+GR+G+ W +K D IT + + D
Sbjct: 117 CSWDNYEVYRYLKGLGYILGRNGISWTLK-----DAAITRPNGEEESACAGECLED---- 167
Query: 178 EESSLVALFYNIQINEVRPVFDVYLPNRKFKKSCPGDPSFL 218
+ ++ L ++QI + + VFDVYLPN +FKKS PG+PSF+
Sbjct: 168 -KDTVTKLLGDMQICDAKAVFDVYLPNSRFKKSSPGEPSFV 207
>gi|297828688|ref|XP_002882226.1| hypothetical protein ARALYDRAFT_317116 [Arabidopsis lyrata subsp.
lyrata]
gi|297328066|gb|EFH58485.1| hypothetical protein ARALYDRAFT_317116 [Arabidopsis lyrata subsp.
lyrata]
Length = 252
Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 100/201 (49%), Positives = 129/201 (64%), Gaps = 21/201 (10%)
Query: 24 DEEDYYMSGFISKLQFRKDISKAHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEET 83
D+E+Y G + K QFR SKA W ELGMAEV K+GK+WTTTGI+R GKTYC IEE
Sbjct: 18 DDEEYQFGGSVPKFQFRVGSSKARWIAELGMAEVELKRGKLWTTTGIIRTGKTYCFIEEA 77
Query: 84 LFLAEIGALYLL-DNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVP 142
L+L+EIG L LL D +D+ + LK++Y +IA K GC WE +EVYR+LK LGYI+GRHGVP
Sbjct: 78 LYLSEIGELQLLGDEDDVVISLKDLYREIAEGKCGCCWEDYEVYRYLKGLGYILGRHGVP 137
Query: 143 WIVK-----IPKGRDINITSDPVSLQVTPKRHGVMDVEPKEESSLVALFYNIQINEVRPV 197
W K P D ++ + S +++ S+ ++QI + RPV
Sbjct: 138 WTTKDVVNTTPSDEDESLCAGEFS---------------QDKDSITKRLSDMQICDARPV 182
Query: 198 FDVYLPNRKFKKSCPGDPSFL 218
FDVYLPN FKKS PG+PSF+
Sbjct: 183 FDVYLPNSHFKKSSPGEPSFV 203
>gi|10092177|gb|AAG12596.1|AC068900_2 hypothetical protein; 15019-15869 [Arabidopsis thaliana]
Length = 213
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 105/222 (47%), Positives = 139/222 (62%), Gaps = 18/222 (8%)
Query: 1 MEENDCDSWEKA--SDNEDSYVDEIDEEDYYMSGFISKLQFR-KDISKAHWNNELGMAEV 57
MEE D WE + S+NE + D+E+Y G KLQFR +D+ + +LGMAEV
Sbjct: 1 MEEKD---WEGSPLSENEAGLLC-YDDEEYQFGGPAPKLQFRWRDLIQDMIVRDLGMAEV 56
Query: 58 VEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLL-DNNDLCLPLKEIYEKIANEKS 116
K+GK+WTTTGI+R GKTYC IEE L+L+EIG L LL D +D+ + LK++Y +IA K
Sbjct: 57 EVKRGKLWTTTGIIRTGKTYCFIEEALYLSEIGELQLLGDEDDVVISLKDLYGEIAEGKY 116
Query: 117 GCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQVTPKRHGVMDVEP 176
GC WE +EVYR+LK LGYI+GRHGVPW K +N T +
Sbjct: 117 GCCWENYEVYRYLKGLGYILGRHGVPWTTKYA----VNTTPSDEDESLCAAEFF------ 166
Query: 177 KEESSLVALFYNIQINEVRPVFDVYLPNRKFKKSCPGDPSFL 218
++ S+ L ++ I + RPVFDVYLPN +FKKS PG+PSF+
Sbjct: 167 QDRDSVTKLLSDMHICDARPVFDVYLPNSQFKKSSPGEPSFV 208
>gi|326499365|dbj|BAK06173.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 272
Score = 180 bits (456), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 96/207 (46%), Positives = 126/207 (60%), Gaps = 12/207 (5%)
Query: 22 EIDEEDYYMSGFIS-------KLQFRKDISKAHWNNELGMAEVVEKKGKMWTTTGIVRNG 74
E D E++ ++ F+S ++QFR S+A W E G AEV++ KGK+W TTGI R G
Sbjct: 24 EDDGEEHQLNPFLSDAAPSSSRVQFRNVASRARWVEEAGAAEVLDNKGKLWLTTGITRGG 83
Query: 75 KTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGY 134
K Y ++EE FLAE GAL LLD+ D+ + ++EIY KIA GCSW F+ Y+HLK LGY
Sbjct: 84 KLYYNVEEIGFLAERGALVLLDDKDVTVGMEEIYRKIAGGSYGCSWLTFQAYKHLKLLGY 143
Query: 135 IVGRHGVPWIVKIPKGRDINITSDPVSLQVTPKRHGVMDVEPKEESSLVALFYNIQINEV 194
IVGR+GVPW +K R +T P S+ T G D + + L I I+ +
Sbjct: 144 IVGRYGVPWTIK--HSRSGEVTDSPESMDNTNLSFGRADA---ARNDITKLLKGIHIDRM 198
Query: 195 RPVFDVYLPNRKFKKSCPGDPSFLLYL 221
P F+V LPN KFKKS PG PSFL+ L
Sbjct: 199 YPSFEVRLPNSKFKKSSPGAPSFLVCL 225
>gi|218202415|gb|EEC84842.1| hypothetical protein OsI_31942 [Oryza sativa Indica Group]
Length = 280
Score = 176 bits (446), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 94/208 (45%), Positives = 133/208 (63%), Gaps = 11/208 (5%)
Query: 22 EIDEEDYYMSGFI--------SKLQFRKDISKAHWNNELGMAEVVEKKGKMWTTTGIVRN 73
E D E+++++ F+ S++QFRK S+A W E G AEVV+ KGK+W TTG+ R+
Sbjct: 29 EDDGEEHHLNPFLDAAPSSSSSRVQFRKVASRAVWVEEAGAAEVVDSKGKLWLTTGVNRD 88
Query: 74 GKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLG 133
GK Y ++EE FLAE GAL LLD + ++EIY KIA K GCSW+ F+ Y+HLK LG
Sbjct: 89 GKLYYNVEEIGFLAERGALVLLDYEGETIGMEEIYGKIAGGKYGCSWDAFQAYKHLKLLG 148
Query: 134 YIVGRHGVPWIVKIPKGRDINITSDPVSLQVTPKRHGVMDVEPKEESSLVALFYNIQINE 193
YI+GR+GVPW VK + ++T S+ T + + V+ + + L + I++
Sbjct: 149 YIIGRYGVPWTVK--RSHTYSVTDASTSVVETDQIQSLNRVD-GASNDITKLLKEMCIDD 205
Query: 194 VRPVFDVYLPNRKFKKSCPGDPSFLLYL 221
+ P F+VYLPN KFKK+ PGDPSF+L L
Sbjct: 206 MHPSFEVYLPNSKFKKTSPGDPSFVLCL 233
>gi|115480007|ref|NP_001063597.1| Os09g0504800 [Oryza sativa Japonica Group]
gi|113631830|dbj|BAF25511.1| Os09g0504800 [Oryza sativa Japonica Group]
gi|215706480|dbj|BAG93336.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222641873|gb|EEE70005.1| hypothetical protein OsJ_29924 [Oryza sativa Japonica Group]
Length = 280
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/208 (45%), Positives = 132/208 (63%), Gaps = 11/208 (5%)
Query: 22 EIDEEDYYMSGFI--------SKLQFRKDISKAHWNNELGMAEVVEKKGKMWTTTGIVRN 73
E D E+++++ F+ S++QFRK S+A W E G AEVV+ KGK+W TTG+ R+
Sbjct: 29 EDDGEEHHLNPFLDAAPSSSSSRVQFRKVASRAVWLEEAGAAEVVDSKGKLWLTTGVNRD 88
Query: 74 GKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLG 133
GK Y ++EE FLAE GAL LLD + ++EIY KIA K GCSW+ F+ Y+HLK LG
Sbjct: 89 GKLYYNVEEIGFLAERGALVLLDYEGETIGMEEIYGKIAGGKYGCSWDAFQAYKHLKLLG 148
Query: 134 YIVGRHGVPWIVKIPKGRDINITSDPVSLQVTPKRHGVMDVEPKEESSLVALFYNIQINE 193
YI+GR+GVPW VK + ++T S+ T + + V + + L + I++
Sbjct: 149 YIIGRYGVPWTVK--RSHTYSVTDASTSVVETDQIQSLNRVG-GASNDITKLLKEMCIDD 205
Query: 194 VRPVFDVYLPNRKFKKSCPGDPSFLLYL 221
+ P F+VYLPN KFKK+ PGDPSF+L L
Sbjct: 206 MHPSFEVYLPNSKFKKTSPGDPSFVLCL 233
>gi|297739629|emb|CBI29811.3| unnamed protein product [Vitis vinifera]
Length = 230
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/122 (68%), Positives = 101/122 (82%), Gaps = 1/122 (0%)
Query: 21 DEIDEEDYY-MSGFISKLQFRKDISKAHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCS 79
D DEE++Y +SG IS LQF K +SKA WN+E+GMA VVEKKGK+W TTG+VRN KTYCS
Sbjct: 95 DANDEEEHYCISGSISNLQFSKAVSKAIWNDEIGMAAVVEKKGKIWITTGVVRNSKTYCS 154
Query: 80 IEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRH 139
IEETLF+AE GAL+LLD+N++ + LK IY+K+A K GC WE FEVYRHLKSLGYIVG H
Sbjct: 155 IEETLFVAEQGALHLLDDNNVTISLKGIYDKVAQGKCGCFWESFEVYRHLKSLGYIVGPH 214
Query: 140 GV 141
G+
Sbjct: 215 GI 216
>gi|357159225|ref|XP_003578379.1| PREDICTED: uncharacterized protein LOC100839648 [Brachypodium
distachyon]
Length = 273
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 90/187 (48%), Positives = 118/187 (63%), Gaps = 5/187 (2%)
Query: 35 SKLQFRKDISKAHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYL 94
S++QFR S+A W E G AEVV+ KGK+W TTGI R K Y ++EE FLAE GAL L
Sbjct: 45 SRVQFRNVASRARWMEEAGAAEVVDSKGKLWLTTGITRGVKLYYNVEEIGFLAERGALVL 104
Query: 95 LDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDIN 154
LDN D + +++IY+KIA GCSW+ F+ Y+HLK LGYI+GRHGVPW +K +I
Sbjct: 105 LDNKDETIGMQDIYKKIAGGNYGCSWDAFQAYKHLKLLGYIIGRHGVPWTLKHSCTSEIT 164
Query: 155 ITSDPVSLQVTPKRHGVMDVEPKEESSLVALFYNIQINEVRPVFDVYLPNRKFKKSCPGD 214
+S V+ D + + LF + I+++ P F+V+LPN KFKKS PG
Sbjct: 165 DSSKSVT-----DTDWSFDRANGACNDITKLFKEMHIDDIYPSFEVHLPNSKFKKSSPGL 219
Query: 215 PSFLLYL 221
PSFLL L
Sbjct: 220 PSFLLCL 226
>gi|414589893|tpg|DAA40464.1| TPA: hypothetical protein ZEAMMB73_137888 [Zea mays]
Length = 297
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 89/186 (47%), Positives = 121/186 (65%), Gaps = 5/186 (2%)
Query: 36 KLQFRKDISKAHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLL 95
++QFR S+A W E G AEVVE +GK+W TTG+ R GK Y ++EET FLAE+GAL LL
Sbjct: 70 RVQFRNMASRARWVEEAGAAEVVENRGKLWLTTGVTRAGKLYYNVEETGFLAEMGALILL 129
Query: 96 DNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINI 155
++ D + +++IY K+A GCSW+ F+ Y+HLKSLGYIVGR GVPW +K G +
Sbjct: 130 NDKDETIGIEDIYGKLAGGNYGCSWDTFQAYKHLKSLGYIVGRFGVPWTMK--HGGTHHT 187
Query: 156 TSDPVSLQVTPKRHGVMDVEPKEESSLVALFYNIQINEVRPVFDVYLPNRKFKKSCPGDP 215
+ +++ T + +D + + L IQI+ + P F+VYLPN KFKKS PG P
Sbjct: 188 IAPQINILETDQSLNRVD---GASNDITKLLKEIQIDGICPSFEVYLPNSKFKKSSPGCP 244
Query: 216 SFLLYL 221
SFLL L
Sbjct: 245 SFLLCL 250
>gi|356523131|ref|XP_003530195.1| PREDICTED: uncharacterized protein LOC100799269 [Glycine max]
Length = 330
Score = 172 bits (436), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 94/182 (51%), Positives = 120/182 (65%), Gaps = 7/182 (3%)
Query: 6 CDSWEKASDNEDSYVDEIDEEDY-YMSGFISKLQFRKDISKAHWNNELGMAEVVEKKGKM 64
C S E SD E + DEE+ SG + KLQFR SK WN E+GM EV+EK GKM
Sbjct: 8 CSSSED-SDGEIYLQNASDEEELGSSSGSMPKLQFRNVKSKGCWNEEMGMGEVIEKNGKM 66
Query: 65 WTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFE 124
W TTGIVR+GK Y SIEETL+L E+GAL ++DN+ + L E+YEK+A+ KSGC WELFE
Sbjct: 67 WITTGIVRSGKIYSSIEETLYLMELGALDIVDNDGRSISLTEMYEKVASGKSGCCWELFE 126
Query: 125 VYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQVTPKRHGVMDVEPKEESSLVA 184
VYRHLKSLGYI+GRHGV W +K I + +++VT + + D + K E S+
Sbjct: 127 VYRHLKSLGYIIGRHGVAWSLK-----SIKSSHKAAAVEVTEESKQLEDTDSKSELSINK 181
Query: 185 LF 186
L+
Sbjct: 182 LW 183
>gi|242051745|ref|XP_002455018.1| hypothetical protein SORBIDRAFT_03g003060 [Sorghum bicolor]
gi|241926993|gb|EES00138.1| hypothetical protein SORBIDRAFT_03g003060 [Sorghum bicolor]
Length = 254
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 89/205 (43%), Positives = 123/205 (60%), Gaps = 22/205 (10%)
Query: 24 DEEDYYMSGFI-------SKLQFRKDISKAHWNNELGMAEVVEKKGKMWTTTGIVRNGKT 76
D E+ +++ F+ S++QFR S+A W E+G AEVVE +GK+W TTG+ R GK
Sbjct: 18 DGEEQHLNPFLDDAPSASSRVQFRHVASRARWVEEIGAAEVVESRGKLWLTTGVTRAGKL 77
Query: 77 YCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIV 136
Y ++EE FLAEIGAL LL + D + ++ IYEK+ GCSW+ F+ Y+HLKSLGYIV
Sbjct: 78 YYNVEEIGFLAEIGALILLSDKDETIGIEGIYEKLVGGNFGCSWDTFQAYKHLKSLGYIV 137
Query: 137 GRHGVPWIVKIPKGRDINITSDPVSLQVTPKRHGVMDVEPKEESSLVALFYNIQINEVRP 196
GR GVPW +K D + + ++ + + L +QI+ + P
Sbjct: 138 GRFGVPWTMKHSGTCDTDQS---------------LNRAGGASNDITKLLKEMQIDGITP 182
Query: 197 VFDVYLPNRKFKKSCPGDPSFLLYL 221
F+VYLPN KFKKS PG P+FLL L
Sbjct: 183 SFEVYLPNSKFKKSSPGSPTFLLCL 207
>gi|414589896|tpg|DAA40467.1| TPA: hypothetical protein ZEAMMB73_137888 [Zea mays]
Length = 205
Score = 166 bits (421), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 87/182 (47%), Positives = 117/182 (64%), Gaps = 5/182 (2%)
Query: 40 RKDISKAHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNND 99
R S+A W E G AEVVE +GK+W TTG+ R GK Y ++EET FLAE+GAL LL++ D
Sbjct: 27 RNMASRARWVEEAGAAEVVENRGKLWLTTGVTRAGKLYYNVEETGFLAEMGALILLNDKD 86
Query: 100 LCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDP 159
+ +++IY K+A GCSW+ F+ Y+HLKSLGYIVGR GVPW +K G + +
Sbjct: 87 ETIGIEDIYGKLAGGNYGCSWDTFQAYKHLKSLGYIVGRFGVPWTMK--HGGTHHTIAPQ 144
Query: 160 VSLQVTPKRHGVMDVEPKEESSLVALFYNIQINEVRPVFDVYLPNRKFKKSCPGDPSFLL 219
+++ T + +D + + L IQI+ + P F+VYLPN KFKKS PG PSFLL
Sbjct: 145 INILETDQSLNRVD---GASNDITKLLKEIQIDGICPSFEVYLPNSKFKKSSPGCPSFLL 201
Query: 220 YL 221
L
Sbjct: 202 CL 203
>gi|212723584|ref|NP_001131753.1| hypothetical protein [Zea mays]
gi|194692434|gb|ACF80301.1| unknown [Zea mays]
gi|414589895|tpg|DAA40466.1| TPA: hypothetical protein ZEAMMB73_137888 [Zea mays]
Length = 250
Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 87/182 (47%), Positives = 117/182 (64%), Gaps = 5/182 (2%)
Query: 40 RKDISKAHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNND 99
R S+A W E G AEVVE +GK+W TTG+ R GK Y ++EET FLAE+GAL LL++ D
Sbjct: 27 RNMASRARWVEEAGAAEVVENRGKLWLTTGVTRAGKLYYNVEETGFLAEMGALILLNDKD 86
Query: 100 LCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDP 159
+ +++IY K+A GCSW+ F+ Y+HLKSLGYIVGR GVPW +K G + +
Sbjct: 87 ETIGIEDIYGKLAGGNYGCSWDTFQAYKHLKSLGYIVGRFGVPWTMK--HGGTHHTIAPQ 144
Query: 160 VSLQVTPKRHGVMDVEPKEESSLVALFYNIQINEVRPVFDVYLPNRKFKKSCPGDPSFLL 219
+++ T + +D + + L IQI+ + P F+VYLPN KFKKS PG PSFLL
Sbjct: 145 INILETDQSLNRVD---GASNDITKLLKEIQIDGICPSFEVYLPNSKFKKSSPGCPSFLL 201
Query: 220 YL 221
L
Sbjct: 202 CL 203
>gi|326530256|dbj|BAJ97554.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 270
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 91/209 (43%), Positives = 123/209 (58%), Gaps = 16/209 (7%)
Query: 22 EIDEEDYYMSGFIS-------KLQFRKDISKAHWNNELGMAEVVEKKGKMWTTTGIVRNG 74
E D E+ +++ F+S ++QFR S+A W E G AEVV+ KGK W TTG+ R G
Sbjct: 22 EDDGEEQHLNPFLSDAGPTASRVQFRNVASRARWVEEAGAAEVVDSKGKPWLTTGVTRGG 81
Query: 75 KTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGY 134
K Y ++EE FLAE GAL LD+ + ++EIY KIA K GCSW+ F+ Y+HLK LGY
Sbjct: 82 KLYYNVEEIGFLAERGALIFLDDEGGTIGMEEIYGKIAGGKYGCSWDAFQAYKHLKLLGY 141
Query: 135 IVGRHGVPWIVK-IPKGRDIN-ITSDPVSLQVTPKRHGVMDVEPKEESSLVALFYNIQIN 192
I+GR+GVPW K P N + P + Q + GV + PK L + +
Sbjct: 142 IIGRYGVPWTTKHSPTCETTNCLEGMPGTEQSFDRATGVHNGIPK-------LLNEVHTD 194
Query: 193 EVRPVFDVYLPNRKFKKSCPGDPSFLLYL 221
+ P ++VYLPN KF+KS PG P FLL +
Sbjct: 195 GLSPSYEVYLPNSKFRKSSPGAPCFLLSM 223
>gi|334185029|ref|NP_001189791.1| uncharacterized protein [Arabidopsis thaliana]
gi|332640278|gb|AEE73799.1| uncharacterized protein [Arabidopsis thaliana]
Length = 197
Score = 163 bits (412), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 84/166 (50%), Positives = 109/166 (65%), Gaps = 11/166 (6%)
Query: 54 MAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLL-DNNDLCLPLKEIYEKIA 112
MAEV K+GK+WTTTGI+R GKTYC IEE L+L+EIG L LL D +D+ + LK++Y +IA
Sbjct: 1 MAEVEVKRGKLWTTTGIIRTGKTYCFIEEALYLSEIGELQLLGDEDDVVISLKDLYGEIA 60
Query: 113 NEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQVTPKRHGVM 172
K GC WE +EVYR+LK LGYI+GRHGVPW K +N T +
Sbjct: 61 EGKYGCCWENYEVYRYLKGLGYILGRHGVPWTTKYA----VNTTPSDEDESLCAAEFF-- 114
Query: 173 DVEPKEESSLVALFYNIQINEVRPVFDVYLPNRKFKKSCPGDPSFL 218
++ S+ L ++ I + RPVFDVYLPN +FKKS PG+PSF+
Sbjct: 115 ----QDRDSVTKLLSDMHICDARPVFDVYLPNSQFKKSSPGEPSFV 156
>gi|79386899|ref|NP_186886.2| uncharacterized protein [Arabidopsis thaliana]
gi|332640277|gb|AEE73798.1| uncharacterized protein [Arabidopsis thaliana]
Length = 161
Score = 162 bits (411), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 84/166 (50%), Positives = 109/166 (65%), Gaps = 11/166 (6%)
Query: 54 MAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLL-DNNDLCLPLKEIYEKIA 112
MAEV K+GK+WTTTGI+R GKTYC IEE L+L+EIG L LL D +D+ + LK++Y +IA
Sbjct: 1 MAEVEVKRGKLWTTTGIIRTGKTYCFIEEALYLSEIGELQLLGDEDDVVISLKDLYGEIA 60
Query: 113 NEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQVTPKRHGVM 172
K GC WE +EVYR+LK LGYI+GRHGVPW K +N T +
Sbjct: 61 EGKYGCCWENYEVYRYLKGLGYILGRHGVPWTTKYA----VNTTPSDEDESLCAAEF--- 113
Query: 173 DVEPKEESSLVALFYNIQINEVRPVFDVYLPNRKFKKSCPGDPSFL 218
++ S+ L ++ I + RPVFDVYLPN +FKKS PG+PSF+
Sbjct: 114 ---FQDRDSVTKLLSDMHICDARPVFDVYLPNSQFKKSSPGEPSFV 156
>gi|6735315|emb|CAB68142.1| hypothetical protein [Arabidopsis thaliana]
Length = 240
Score = 162 bits (410), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 97/224 (43%), Positives = 134/224 (59%), Gaps = 39/224 (17%)
Query: 1 MEENDCDSWE--KASDNEDSYVDEIDEEDYYMSGFISKLQFRKDISKAHWNNELGMAEVV 58
MEE D WE +S+NE + ++ D+E+++ G + KLQFR SKA W ELGMAEV
Sbjct: 1 MEEKD---WEASSSSENEGGFPND-DDEEFHSGGSVPKLQFRVGSSKARWITELGMAEVE 56
Query: 59 EKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDN-NDLCLPLKEIYEKIANEKSG 117
K+GK+WTTTGI+R+GKTYC IEE L+L+EIG L +L N +D+ +PLK++YEKIA EKS
Sbjct: 57 VKRGKLWTTTGIIRSGKTYCFIEEALYLSEIGELQILGNEDDIVIPLKDLYEKIAEEKS- 115
Query: 118 CSWELFEVYRHLKSLGYIVGRHGVPWIVK---IPKGRDINITSDPVSLQVTPKRHGVMDV 174
+LG RHGV W +K P G + + +
Sbjct: 116 ------------VALGKTT-RHGVSWTLKDAARPNGEEESACAGEC-------------- 148
Query: 175 EPKEESSLVALFYNIQINEVRPVFDVYLPNRKFKKSCPGDPSFL 218
P + ++ L ++QI + + VFDVYLPN +FKKS PG+PSF+
Sbjct: 149 -PADNDTVTKLLGDMQICDAKAVFDVYLPNSRFKKSSPGEPSFV 191
>gi|242045232|ref|XP_002460487.1| hypothetical protein SORBIDRAFT_02g029155 [Sorghum bicolor]
gi|241923864|gb|EER97008.1| hypothetical protein SORBIDRAFT_02g029155 [Sorghum bicolor]
Length = 240
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/187 (44%), Positives = 113/187 (60%), Gaps = 11/187 (5%)
Query: 35 SKLQFRKDISKAHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYL 94
S++Q R S+A W E G AEVVE G +W TTG+ R GK Y ++EE FLAE GAL L
Sbjct: 18 SRVQHRNMASRARWVEETGAAEVVESWGNIWLTTGVTRAGKLYYNVEEIGFLAERGALIL 77
Query: 95 LDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDIN 154
L + D + ++ IYEK+A GCSW+ F+ Y+ LKSLGYIVGR GVPW +K
Sbjct: 78 LSDKDETIGIEGIYEKLAGGNYGCSWDTFQAYKQLKSLGYIVGRFGVPWTMK------HG 131
Query: 155 ITSDPVSLQVTPKRHGVMDVEPKEESSLVALFYNIQINEVRPVFDVYLPNRKFKKSCPGD 214
T D ++ Q+ +++++ + +QI+ + P F+VYLPN KFKKS G
Sbjct: 132 STCDTIAPQMN-----ILEIDQSLNKTTEWSLKEMQIDGISPFFEVYLPNSKFKKSSAGS 186
Query: 215 PSFLLYL 221
PSFLL L
Sbjct: 187 PSFLLCL 193
>gi|238014748|gb|ACR38409.1| unknown [Zea mays]
Length = 212
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 92/147 (62%), Gaps = 5/147 (3%)
Query: 75 KTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGY 134
K +C ++ FLAE+GAL LL++ D + +++IY K+A GCSW+ F+ Y+HLKSLGY
Sbjct: 24 KAHCLMKTCRFLAEMGALILLNDKDETIGIEDIYGKLAGGNYGCSWDTFQAYKHLKSLGY 83
Query: 135 IVGRHGVPWIVKIPKGRDINITSDPVSLQVTPKRHGVMDVEPKEESSLVALFYNIQINEV 194
IVGR GVPW +K G + + +++ T + +D + + L IQI+ +
Sbjct: 84 IVGRFGVPWTMK--HGGTHHTIAPQINILETDQSLNRVD---GASNDITKLLKEIQIDGI 138
Query: 195 RPVFDVYLPNRKFKKSCPGDPSFLLYL 221
P F+VYLPN KFKKS PG PSFLL L
Sbjct: 139 CPSFEVYLPNSKFKKSSPGCPSFLLCL 165
>gi|168030362|ref|XP_001767692.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681012|gb|EDQ67443.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 219
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 97/185 (52%), Gaps = 18/185 (9%)
Query: 44 SKAHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLP 103
S A W+ E G+AEVV KKGK W TG R + IEE +F+ E G+L LL + +
Sbjct: 1 SVAQWDAERGIAEVVVKKGKAWIVTGFTRGSRHAIFIEEAVFMVEQGSL-LLREGERVVD 59
Query: 104 LKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVK-----IPKGRDINIT-S 157
L E Y ++ GCSW ++VY +LK LGYIVGRH VPW V +P + N S
Sbjct: 60 LLEAYSLVSTPSYGCSWNNYQVYSYLKKLGYIVGRHNVPWTVSKKRPPMPADEETNTACS 119
Query: 158 DPVSLQVTPKRHGVMDVEPKEESSLVALFYNIQINEVRPVFDVYLPNRKFKKSCPGDPSF 217
V + P +++ E SS + L Y DV+LPN +FKKS PG P+F
Sbjct: 120 QLVDSKSAPGFEVNTELQGSESSSEMKLMY-----------DVHLPNARFKKSNPGLPAF 168
Query: 218 LLYLT 222
L T
Sbjct: 169 SLCTT 173
>gi|302756839|ref|XP_002961843.1| hypothetical protein SELMODRAFT_76410 [Selaginella moellendorffii]
gi|300170502|gb|EFJ37103.1| hypothetical protein SELMODRAFT_76410 [Selaginella moellendorffii]
Length = 196
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 98/183 (53%), Gaps = 31/183 (16%)
Query: 40 RKDISKAHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNND 99
RKD S A W+ +GMA V +GK+W TTG++R+ C++EET++L E G L +L
Sbjct: 1 RKDASTAEWDGRIGMARVANPRGKIWNTTGVIRSSSLLCNVEETIYLVEQGCL-ILTLQG 59
Query: 100 LCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDP 159
+ L E+ E + EK+GCS + + VY H K+LGY+V RH V W K +P
Sbjct: 60 RTMDLHEVLELLGVEKNGCSMDAYNVYSHFKALGYVVSRHNVDWTAK----------EEP 109
Query: 160 VSLQVTPKRHGVMDVEPKEESSLVALFYNIQINEVRPVFDVYLPNRKFKKSCPGDPSFLL 219
S+ D E + SS + ++ VFDVY PN +F+K+ PG P F L
Sbjct: 110 ESI----------DRERDDHSS----------SSLKLVFDVYAPNSQFRKTSPGVPLFSL 149
Query: 220 YLT 222
++
Sbjct: 150 CVS 152
>gi|302798096|ref|XP_002980808.1| hypothetical protein SELMODRAFT_113329 [Selaginella moellendorffii]
gi|300151347|gb|EFJ17993.1| hypothetical protein SELMODRAFT_113329 [Selaginella moellendorffii]
Length = 197
Score = 119 bits (299), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 97/183 (53%), Gaps = 30/183 (16%)
Query: 40 RKDISKAHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNND 99
RKD S A W++ +GMA V +GK+W TTG++R+ C++EET++L E G L +L
Sbjct: 1 RKDASTAEWDDRIGMARVANPRGKIWNTTGVIRSSSLLCNVEETIYLVEQGCL-VLTLQG 59
Query: 100 LCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDP 159
+ L E+ E + EK+GCS + + VY H K+LGY+V RH V W K
Sbjct: 60 RTMDLHEVLELLGVEKNGCSMDAYNVYSHFKALGYVVSRHNVDWTAK------------- 106
Query: 160 VSLQVTPKRHGVMDVEPKEESSLVALFYNIQINEVRPVFDVYLPNRKFKKSCPGDPSFLL 219
+ +D E + SS +L + VFDVY PN +F+K+ PG P F L
Sbjct: 107 -------EELESIDRERDDHSSSSSL---------KLVFDVYAPNSQFRKTSPGVPLFSL 150
Query: 220 YLT 222
++
Sbjct: 151 CVS 153
>gi|6957701|gb|AAF32445.1| hypothetical protein [Arabidopsis thaliana]
Length = 168
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 83/135 (61%), Gaps = 11/135 (8%)
Query: 85 FLAEIGALYLL-DNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPW 143
+L+EIG L LL D +D+ + LK++Y +IA K GC WE +EVYR+LK LGYI+GRHGVPW
Sbjct: 39 YLSEIGELQLLGDEDDVVISLKDLYGEIAEGKYGCCWENYEVYRYLKGLGYILGRHGVPW 98
Query: 144 IVKIPKGRDINITSDPVSLQVTPKRHGVMDVEPKEESSLVALFYNIQINEVRPVFDVYLP 203
K +N T + ++ S+ L ++ I + RPVFDVYLP
Sbjct: 99 TTKYA----VNTTPSDEDESLCAAEFF------QDRDSVTKLLSDMHICDARPVFDVYLP 148
Query: 204 NRKFKKSCPGDPSFL 218
N +FKKS PG+PSF+
Sbjct: 149 NSQFKKSSPGEPSFV 163
>gi|449479344|ref|XP_002190299.2| PREDICTED: tRNA-splicing endonuclease subunit Sen54 [Taeniopygia
guttata]
Length = 459
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 61/116 (52%), Gaps = 3/116 (2%)
Query: 42 DISKAHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLC 101
++ KA W E G+ E+ GK W T G GK EE L+L E G++ L D+
Sbjct: 10 NLVKAEWKPEQGIVELKSPAGKFWHTMGFSERGKQCLLPEEALYLLECGSVQLF-YRDVA 68
Query: 102 LPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITS 157
L ++E YE + +++ S ++V+ HLK LGYIV R P V P R +N+ S
Sbjct: 69 LSIQEAYETLLCQEA-MSLSHYQVFSHLKQLGYIVLRFD-PSTVPSPYERQLNLES 122
>gi|308813556|ref|XP_003084084.1| Predicted tRNA-splicing endonuclease subunit (ISS) [Ostreococcus
tauri]
gi|116055967|emb|CAL58500.1| Predicted tRNA-splicing endonuclease subunit (ISS) [Ostreococcus
tauri]
Length = 323
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 64/145 (44%), Gaps = 9/145 (6%)
Query: 3 ENDCDSWEKASDNEDSYVDEIDEEDYYMSGFISKLQFRKDISKAHWNNELGMAEVVEKKG 62
EN D+ E+ + D +D + + ++S A W E MAEV+ +G
Sbjct: 18 ENASDAGERRREQRDVRLDAA-----LRAWTTRRGSHESNVSVAIWRRERSMAEVIRSRG 72
Query: 63 KMWTTTGIVRNGKTYCSIEETLFLAEIG--ALYLLDNNDLCLPLKEIYEKIANEKSGCSW 120
+ G R T+ EE FL E AL+ + + C ++ +Y +A ++G W
Sbjct: 73 RQLQRVGTARGNATWLFAEECAFLCETERLALFFDEREEECASVRAVYALMA--RTGVGW 130
Query: 121 ELFEVYRHLKSLGYIVGRHGVPWIV 145
E + Y HL+ LGY R G W V
Sbjct: 131 EEYLAYAHLRRLGYGCRRFGSAWTV 155
>gi|441644060|ref|XP_004093265.1| PREDICTED: LOW QUALITY PROTEIN: tRNA-splicing endonuclease subunit
Sen54 [Nomascus leucogenys]
Length = 282
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 59/113 (52%), Gaps = 3/113 (2%)
Query: 43 ISKAHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCL 102
+ A W E G E+ GK W T G G+ EE L+L E G+++L + DL L
Sbjct: 20 LVAAEWRPEEGFVELKSPAGKFWQTMGFSEQGRQRLHPEEALYLLECGSIHLF-HQDLPL 78
Query: 103 PLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINI 155
++E Y+ + + + ++ ++V+ HLK LGY+V R P V P R +N+
Sbjct: 79 SIQEAYQLLLTDHT-VTFLQYQVFSHLKRLGYVVRRFQ-PSSVLSPYERQLNL 129
>gi|417402385|gb|JAA48042.1| Putative trna-splicing endonuclease subunit sen54 [Desmodus
rotundus]
Length = 531
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 63/125 (50%), Gaps = 6/125 (4%)
Query: 46 AHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLK 105
A W E G E+ GK W T G G+ EE L+L E G++ L DL L ++
Sbjct: 80 AEWRPEEGFVELKSPAGKFWQTMGFSEQGRQRLHPEEALYLLECGSIQLF-YQDLPLSIQ 138
Query: 106 EIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQVT 165
E Y+ + +E + ++ ++V+ HLK LGY+V R P + P R +N+ S S Q +
Sbjct: 139 EAYQLLLSEDT-VTFLQYQVFSHLKRLGYVV-RRFQPSAILSPYERQLNLDS---SAQSS 193
Query: 166 PKRHG 170
R G
Sbjct: 194 EDRSG 198
>gi|157818699|ref|NP_001103046.1| tRNA-splicing endonuclease subunit Sen54 [Rattus norvegicus]
gi|149054798|gb|EDM06615.1| rCG32786, isoform CRA_b [Rattus norvegicus]
Length = 525
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 57/110 (51%), Gaps = 3/110 (2%)
Query: 46 AHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLK 105
A W E G E+ GK W T G G+ EE L+L E G++ L DL L ++
Sbjct: 80 AEWRPEEGFVELTSPAGKFWQTMGYSEEGRQRLHPEEALYLLECGSIQLF-YQDLPLSIQ 138
Query: 106 EIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINI 155
E Y+ + E + S+ ++V+ HLK LGY+V R + +V P R +N+
Sbjct: 139 EAYQLLLTEDT-LSFLQYQVFSHLKRLGYVVRRFQLSSVVS-PYERQLNL 186
>gi|148702575|gb|EDL34522.1| mCG6634, isoform CRA_a [Mus musculus]
Length = 483
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 57/110 (51%), Gaps = 3/110 (2%)
Query: 46 AHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLK 105
A W E G E+ GK W T G G+ EE L+L E G++ L DL L ++
Sbjct: 77 AEWKPEEGFVELTSPAGKFWQTMGYSEEGRQRLHPEEALYLLECGSIQLF-YQDLPLSIQ 135
Query: 106 EIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINI 155
E Y+ + E + S+ ++V+ HLK LGY+V R + +V P R +N+
Sbjct: 136 EAYQLLLTEDT-LSFLQYQVFSHLKRLGYVVRRFQLSSVVS-PYERQLNL 183
>gi|26354132|dbj|BAC40696.1| unnamed protein product [Mus musculus]
Length = 483
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 57/110 (51%), Gaps = 3/110 (2%)
Query: 46 AHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLK 105
A W E G E+ GK W T G G+ EE L+L E G++ L DL L ++
Sbjct: 77 AEWKPEEGFVELTSPAGKFWQTMGYSEEGRQRLHPEEALYLLECGSIQLF-YQDLPLSIQ 135
Query: 106 EIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINI 155
E Y+ + E + S+ ++V+ HLK LGY+V R + +V P R +N+
Sbjct: 136 EAYQLLLTEDT-LSFLQYQVFSHLKRLGYVVRRFQLSSVVS-PYERQLNL 183
>gi|108389163|ref|NP_083833.1| tRNA-splicing endonuclease subunit Sen54 [Mus musculus]
gi|50401564|sp|Q8C2A2.2|SEN54_MOUSE RecName: Full=tRNA-splicing endonuclease subunit Sen54; AltName:
Full=tRNA-intron endonuclease Sen54
gi|12832975|dbj|BAB22335.1| unnamed protein product [Mus musculus]
Length = 525
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 57/110 (51%), Gaps = 3/110 (2%)
Query: 46 AHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLK 105
A W E G E+ GK W T G G+ EE L+L E G++ L DL L ++
Sbjct: 80 AEWKPEEGFVELTSPAGKFWQTMGYSEEGRQRLHPEEALYLLECGSIQLF-YQDLPLSIQ 138
Query: 106 EIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINI 155
E Y+ + E + S+ ++V+ HLK LGY+V R + +V P R +N+
Sbjct: 139 EAYQLLLTEDT-LSFLQYQVFSHLKRLGYVVRRFQLSSVVS-PYERQLNL 186
>gi|148702576|gb|EDL34523.1| mCG6634, isoform CRA_b [Mus musculus]
Length = 543
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 57/110 (51%), Gaps = 3/110 (2%)
Query: 46 AHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLK 105
A W E G E+ GK W T G G+ EE L+L E G++ L DL L ++
Sbjct: 98 AEWKPEEGFVELTSPAGKFWQTMGYSEEGRQRLHPEEALYLLECGSIQLF-YQDLPLSIQ 156
Query: 106 EIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINI 155
E Y+ + E + S+ ++V+ HLK LGY+V R + +V P R +N+
Sbjct: 157 EAYQLLLTEDT-LSFLQYQVFSHLKRLGYVVRRFQLSSVVS-PYERQLNL 204
>gi|329664214|ref|NP_001192620.1| tRNA-splicing endonuclease subunit Sen54 [Bos taurus]
gi|296476024|tpg|DAA18139.1| TPA: hypothetical protein BOS_19481 [Bos taurus]
Length = 528
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 57/110 (51%), Gaps = 3/110 (2%)
Query: 46 AHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLK 105
A W E G E+ GK W T G G+ EE L+L E G++ L + DL L ++
Sbjct: 80 AEWRPEEGFVELKSPAGKFWQTMGFSEQGRQRLHPEEALYLLECGSIQLF-HQDLPLSIQ 138
Query: 106 EIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINI 155
E Y+ + E + ++ ++V+ HLK LGY+V R P V P R +N+
Sbjct: 139 EAYQLLLTEDT-VTFLQYQVFSHLKRLGYVV-RRFQPSSVLSPYERQLNL 186
>gi|449283034|gb|EMC89737.1| tRNA-splicing endonuclease subunit Sen54, partial [Columba livia]
Length = 438
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 60/116 (51%), Gaps = 3/116 (2%)
Query: 42 DISKAHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLC 101
++ KA W G+ E+ GK W T G GK EE L+L E G + L DL
Sbjct: 1 NLVKAEWKPGQGIVELQSPAGKFWHTMGFSERGKQCLLPEEALYLLECGYVQLF-YRDLP 59
Query: 102 LPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITS 157
L ++E YE + ++++ S ++V+ HLK LGYIV R P V P R +N+ S
Sbjct: 60 LSVQEAYEILLSQEA-VSLPHYQVFSHLKQLGYIVLRFD-PSTVPSPYERQLNLES 113
>gi|440895191|gb|ELR47452.1| tRNA-splicing endonuclease subunit Sen54, partial [Bos grunniens
mutus]
Length = 454
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 57/110 (51%), Gaps = 3/110 (2%)
Query: 46 AHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLK 105
A W E G E+ GK W T G G+ EE L+L E G++ L + DL L ++
Sbjct: 6 AEWRPEEGFVELKSPAGKFWQTMGFSEQGRQRLHPEEALYLLECGSIQLF-HQDLPLSIQ 64
Query: 106 EIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINI 155
E Y+ + E + ++ ++V+ HLK LGY+V R P V P R +N+
Sbjct: 65 EAYQLLLTEDT-VTFLQYQVFSHLKRLGYVV-RRFQPSSVLSPYERQLNL 112
>gi|29126915|gb|AAH47793.1| TRNA splicing endonuclease 54 homolog (S. cerevisiae) [Homo
sapiens]
Length = 526
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 59/112 (52%), Gaps = 3/112 (2%)
Query: 46 AHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLK 105
A W E G E+ GK W T G G+ EE L+L E G+++L + DL L ++
Sbjct: 80 AEWRPEEGFVELKSPAGKFWQTMGFSEQGRQRLHPEEALYLLECGSIHLF-HQDLPLSIQ 138
Query: 106 EIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITS 157
E Y+ + + + ++ ++V+ HLK LGY+V R P V P R +N+ +
Sbjct: 139 EAYQLLLTDHT-VTFLQYQVFSHLKRLGYVV-RRFQPSSVLSPYERQLNLDA 188
>gi|31565520|gb|AAH53643.1| TSEN54 protein [Homo sapiens]
Length = 527
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 59/112 (52%), Gaps = 3/112 (2%)
Query: 46 AHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLK 105
A W E G E+ GK W T G G+ EE L+L E G+++L + DL L ++
Sbjct: 81 AEWRPEEGFVELKSPAGKFWQTMGFSEQGRQRLHPEEALYLLECGSIHLF-HQDLPLSIQ 139
Query: 106 EIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITS 157
E Y+ + + + ++ ++V+ HLK LGY+V R P V P R +N+ +
Sbjct: 140 EAYQLLLTDHT-VTFLQYQVFSHLKRLGYVV-RRFQPSSVLSPYERQLNLDA 189
>gi|395749454|ref|XP_003778946.1| PREDICTED: LOW QUALITY PROTEIN: tRNA-splicing endonuclease subunit
Sen54 [Pongo abelii]
Length = 622
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 3/110 (2%)
Query: 46 AHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLK 105
A W E G E+ GK W T G G+ EE L+L E G+++L + DL L ++
Sbjct: 174 AEWRPEEGFVELKSPAGKFWQTMGFSEQGRQRLHPEEALYLLECGSIHLF-HQDLPLSIQ 232
Query: 106 EIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINI 155
E Y+ + + + S+ ++V+ HLK LGY+V R P V P R +N+
Sbjct: 233 EAYQLLLTDHT-VSFLQYQVFSHLKRLGYVV-RRFQPSSVLSPYERQLNL 280
>gi|114670473|ref|XP_001143195.1| PREDICTED: tRNA-splicing endonuclease subunit Sen54 isoform 4 [Pan
troglodytes]
gi|410209566|gb|JAA02002.1| tRNA splicing endonuclease 54 homolog [Pan troglodytes]
gi|410300108|gb|JAA28654.1| tRNA splicing endonuclease 54 homolog [Pan troglodytes]
Length = 526
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 59/112 (52%), Gaps = 3/112 (2%)
Query: 46 AHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLK 105
A W E G E+ GK W T G G+ EE L+L E G+++L + DL L ++
Sbjct: 80 AEWRPEEGFVELKSPAGKFWQTMGFSEQGRQRLHPEEALYLLECGSIHLF-HQDLPLSIQ 138
Query: 106 EIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITS 157
E Y+ + + + ++ ++V+ HLK LGY+V R P V P R +N+ +
Sbjct: 139 EAYQLLLTDHT-VTFLQYQVFSHLKRLGYVV-RRFQPSSVLSPYERQLNLDA 188
>gi|108389176|ref|NP_997229.2| tRNA-splicing endonuclease subunit Sen54 [Homo sapiens]
gi|296452961|sp|Q7Z6J9.3|SEN54_HUMAN RecName: Full=tRNA-splicing endonuclease subunit Sen54; AltName:
Full=SEN54 homolog; Short=HsSEN54; AltName:
Full=tRNA-intron endonuclease Sen54
Length = 526
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 59/112 (52%), Gaps = 3/112 (2%)
Query: 46 AHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLK 105
A W E G E+ GK W T G G+ EE L+L E G+++L + DL L ++
Sbjct: 80 AEWRPEEGFVELKSPAGKFWQTMGFSEQGRQRLHPEEALYLLECGSIHLF-HQDLPLSIQ 138
Query: 106 EIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITS 157
E Y+ + + + ++ ++V+ HLK LGY+V R P V P R +N+ +
Sbjct: 139 EAYQLLLTDHT-VTFLQYQVFSHLKRLGYVV-RRFQPSSVLSPYERQLNLDA 188
>gi|291238835|ref|XP_002739332.1| PREDICTED: tRNA splicing endonuclease 54 homolog [Saccoglossus
kowalevskii]
Length = 650
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 55/97 (56%), Gaps = 3/97 (3%)
Query: 43 ISKAHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCL 102
+++A WN LG+AE+ +KGK W T G N K + EE LFL G+L L N + L
Sbjct: 95 LAQATWNGGLGLAELTLEKGKFWNTMGHHINDKKWLLPEEALFLMNGGSLELYCNG-VPL 153
Query: 103 PLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRH 139
++E Y + E E ++VY HL+ LGYIV RH
Sbjct: 154 SIQEAYSILIPEY--VPIEYYQVYSHLQRLGYIVIRH 188
>gi|431908774|gb|ELK12366.1| tRNA-splicing endonuclease subunit Sen54 [Pteropus alecto]
Length = 497
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 2/105 (1%)
Query: 46 AHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLK 105
A W E G E+ GK W T G G+ EE L+L E G++ L + DL L ++
Sbjct: 80 AEWRPEEGFVELKSPAGKFWQTMGFSEQGRQRLHPEEALYLLECGSIQLF-HQDLPLSIQ 138
Query: 106 EIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKG 150
E Y+ + E + ++ ++V+ HLK LGY+V R I K P+
Sbjct: 139 EAYQLLLTEDT-VTFLQYQVFSHLKRLGYVVRRFQPRSINKKPRA 182
>gi|145355706|ref|XP_001422092.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582332|gb|ABP00409.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 334
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 84/235 (35%), Gaps = 61/235 (25%)
Query: 46 AHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIG--ALYLLDNNDLCLP 103
A W AEVV +G+ +T G R + S EE FL E AL+ + ++ C
Sbjct: 63 AIWRATKRRAEVVRHRGRHFTRFGCARGDGVWLSAEECAFLVETERLALFFSEKDERCAS 122
Query: 104 LKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVK----------------- 146
++ +Y +A + G S E + Y H+ LGY+ R G W ++
Sbjct: 123 VRAVYRLMA--RVGVSREAYLAYAHVCRLGYVCRRFGSAWTMEARASDADLVAATEGLGI 180
Query: 147 ------------------------IPKGRDINITSDPVSLQ---------------VTPK 167
P R+I T LQ + P+
Sbjct: 181 WKRAREGEDGAVDDDRDAVKRRKIAPSTREIKKTPRQRELQSRRWWFASGAIEHEWIGPE 240
Query: 168 RHGVMDVEPKEESSLVALFYNIQINEVRPVFDVYLPNRKFKKSCPGDPSFLLYLT 222
++ K ++ L Y+ V P F VY PNR F K P SF LY+
Sbjct: 241 IDAAIEANAKPPYAMT-LEYDETPVRVAPTFQVYQPNRNFSKKSPDPVSFYLYVA 294
>gi|444727836|gb|ELW68314.1| Lethal(2) giant larvae protein like protein 2 [Tupaia chinensis]
Length = 4077
Score = 65.1 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 42/125 (33%), Positives = 62/125 (49%), Gaps = 6/125 (4%)
Query: 46 AHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLK 105
A W E G E+ GK W T G + G+ EE L+L E G+L L + DL L ++
Sbjct: 64 AEWRAEEGFVELKTPAGKFWQTMGFSQRGRQRLHPEEALYLLECGSLQLF-HQDLPLSIQ 122
Query: 106 EIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQVT 165
E Y+ + E + ++ ++V+ HLK LGY+V R P + P R +N+ S Q
Sbjct: 123 EAYQLLLTEDT-VTFLQYQVFSHLKRLGYVVRRFQ-PSSILSPYERQLNLAG---SAQYL 177
Query: 166 PKRHG 170
HG
Sbjct: 178 KDGHG 182
>gi|345804620|ref|XP_540434.3| PREDICTED: tRNA-splicing endonuclease subunit Sen54 [Canis lupus
familiaris]
Length = 531
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 3/110 (2%)
Query: 46 AHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLK 105
A W E G E+ GK W T G G+ EE L+L E G++ L + DL L ++
Sbjct: 80 AEWRPEEGFVELKSPAGKFWQTMGFSEQGRQRLHPEEALYLLECGSIQLF-HQDLPLSIQ 138
Query: 106 EIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINI 155
E Y+ + E + ++ ++V+ HLK LGY+V R P + P R +N+
Sbjct: 139 EAYQLLLTEDA-VTFLQYQVFSHLKRLGYVV-RRFQPGSILSPYERQLNL 186
>gi|410981822|ref|XP_003997265.1| PREDICTED: tRNA-splicing endonuclease subunit Sen54 [Felis catus]
Length = 529
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 60/118 (50%), Gaps = 3/118 (2%)
Query: 46 AHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLK 105
A W E G E+ GK W T G G+ EE L+L E G++ L + DL L ++
Sbjct: 78 AEWRPEEGFVELKSPAGKFWQTMGFSEQGRQRLHPEEALYLLECGSIQLF-HQDLPLSIQ 136
Query: 106 EIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQ 163
E Y+ + E + ++ ++V+ HLK LGY+V R P + P R +N+ + L+
Sbjct: 137 EAYQLLLTEDT-MTFLQYQVFSHLKRLGYVV-RRFQPSSILSPYERQLNLDGSALCLE 192
>gi|355568919|gb|EHH25200.1| hypothetical protein EGK_08980, partial [Macaca mulatta]
gi|355754379|gb|EHH58344.1| hypothetical protein EGM_08170, partial [Macaca fascicularis]
Length = 452
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 58/110 (52%), Gaps = 3/110 (2%)
Query: 46 AHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLK 105
A W E G E+ GK W T G G+ EE L+L E G+++L + DL L ++
Sbjct: 6 AEWRPEEGFVELKSPAGKFWQTMGFSEQGQQRLHPEEALYLLECGSIHLF-HQDLPLSIQ 64
Query: 106 EIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINI 155
E Y+ + + + ++ ++V+ HLK LGY+V R P V P R +N+
Sbjct: 65 EAYQLLLTDDT-VTFLQYQVFSHLKRLGYVV-RRFQPSSVLSPYERQLNL 112
>gi|387763180|ref|NP_001248477.1| tRNA-splicing endonuclease subunit Sen54 [Macaca mulatta]
gi|380789909|gb|AFE66830.1| tRNA-splicing endonuclease subunit Sen54 [Macaca mulatta]
gi|383410101|gb|AFH28264.1| tRNA-splicing endonuclease subunit Sen54 [Macaca mulatta]
Length = 526
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 58/110 (52%), Gaps = 3/110 (2%)
Query: 46 AHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLK 105
A W E G E+ GK W T G G+ EE L+L E G+++L + DL L ++
Sbjct: 80 AEWRPEEGFVELKSPAGKFWQTMGFSEQGQQRLHPEEALYLLECGSIHLF-HQDLPLSIQ 138
Query: 106 EIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINI 155
E Y+ + + + ++ ++V+ HLK LGY+V R P V P R +N+
Sbjct: 139 EAYQLLLTDDT-VTFLQYQVFSHLKRLGYVV-RRFQPSSVLSPYERQLNL 186
>gi|426346868|ref|XP_004041091.1| PREDICTED: LOW QUALITY PROTEIN: tRNA-splicing endonuclease subunit
Sen54 [Gorilla gorilla gorilla]
Length = 573
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 58/110 (52%), Gaps = 3/110 (2%)
Query: 46 AHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLK 105
A W E G E+ GK W T G G+ EE L+L E G+++L + DL L ++
Sbjct: 127 AEWRPEEGFVELKSPAGKFWQTMGFSEQGRQRLHPEEALYLLECGSIHLF-HQDLPLSIQ 185
Query: 106 EIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINI 155
E Y+ + + + ++ ++V+ HLK LGY+V R P V P R +N+
Sbjct: 186 EAYQLLLTDHT-VTFLQYQVFSHLKRLGYVV-RRFQPSSVLSPYERQLNL 233
>gi|296203185|ref|XP_002748826.1| PREDICTED: tRNA-splicing endonuclease subunit Sen54 [Callithrix
jacchus]
Length = 530
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 3/110 (2%)
Query: 46 AHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLK 105
A W E G E+ GK W T G G+ EE L+L E G++ L + DL L ++
Sbjct: 84 AEWRPEEGFVELKSPAGKFWQTMGFSEQGRQRLHPEEALYLLECGSIQLF-HQDLPLSIQ 142
Query: 106 EIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINI 155
E Y+ + + + ++ ++V+ HLK LGY+V R P V P R +N+
Sbjct: 143 EAYQLLLTDDT-VTFLQYQVFSHLKRLGYVV-RRFQPSSVLFPYERQLNL 190
>gi|395532927|ref|XP_003768516.1| PREDICTED: tRNA-splicing endonuclease subunit Sen54 [Sarcophilus
harrisii]
Length = 542
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 65/122 (53%), Gaps = 3/122 (2%)
Query: 36 KLQFRKDISKAHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLL 95
+++ R + A W+ + G+ + GK W T G G+ EE ++L E G++ L
Sbjct: 76 RVERRGSLVTAEWSPQHGVVTLKTFAGKFWQTMGFSEGGQQRLYPEEAVYLLECGSIQLF 135
Query: 96 DNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINI 155
DL L ++E YE + + + S+ ++V+ HLK LGY+V R P +V+ P R +N+
Sbjct: 136 -YQDLPLSIQEAYEMLLAQGTR-SFLQYQVFSHLKRLGYVV-RRFQPGLVQSPYERQLNL 192
Query: 156 TS 157
S
Sbjct: 193 ES 194
>gi|242017366|ref|XP_002429160.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212514038|gb|EEB16422.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 245
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 68/127 (53%), Gaps = 7/127 (5%)
Query: 20 VDEIDEEDYYMSGF---ISKLQFRK--DISKAHWNNELGMAEVVEKKGKMWTTTGIVRNG 74
V+E ++ +SG IS + +K +S+A W+ EL MAEVV + G W G V N
Sbjct: 34 VEEQNQIQSILSGIHDVISTERVKKIDSLSQAKWHPELQMAEVVRQIGSHWFKMGHVINK 93
Query: 75 KTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIY-EKIANEKSGCSWELFEVYRHLKSLG 133
K Y EE L+L E G L L N+L L ++ Y + N ++G S E + VY +L S G
Sbjct: 94 KLYIYPEEALYLLECGHLE-LTYNELPLSIQRAYFLLLENGENGVSLENYRVYSYLNSAG 152
Query: 134 YIVGRHG 140
+ V RH
Sbjct: 153 FKVLRHS 159
>gi|194216659|ref|XP_001916857.1| PREDICTED: tRNA-splicing endonuclease subunit Sen54-like [Equus
caballus]
Length = 537
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 59/117 (50%), Gaps = 3/117 (2%)
Query: 39 FRKDISKAHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNN 98
+ + A W E G E+ GK W T G G+ EE L+L E G++ L +
Sbjct: 80 LKGSLVTAEWRPEEGFVELKSPAGKFWQTMGFSEQGRQRLHPEEALYLLECGSIQLF-HQ 138
Query: 99 DLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINI 155
DL L ++E Y+ + E + ++ ++V+ HLK LGY+V R P + P R +N+
Sbjct: 139 DLPLSIQEAYQLLLTEDT-VTFLQYQVFSHLKRLGYVV-RRFQPSSILSPYERQLNL 193
>gi|402901077|ref|XP_003913483.1| PREDICTED: tRNA-splicing endonuclease subunit Sen54 [Papio anubis]
Length = 528
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 3/110 (2%)
Query: 46 AHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLK 105
A W E G E+ GK W T G G+ EE L+L E G+++L + DL L ++
Sbjct: 82 AEWRPEEGFVELKSPAGKFWQTMGFSEQGRQRLHPEEALYLLECGSIHLF-HQDLPLSIQ 140
Query: 106 EIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINI 155
E Y+ + + ++ ++V+ HLK LGY+V R P V P R +N+
Sbjct: 141 EAYQLLLTGDT-VTFLQYQVFSHLKRLGYVV-RRFQPSSVLSPYERQLNL 188
>gi|397484493|ref|XP_003813409.1| PREDICTED: tRNA-splicing endonuclease subunit Sen54 [Pan paniscus]
Length = 780
Score = 63.9 bits (154), Expect = 5e-08, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 59/112 (52%), Gaps = 3/112 (2%)
Query: 46 AHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLK 105
A W E G E+ GK W T G G+ EE L+L E G+++L + DL L ++
Sbjct: 335 AEWRPEEGFVELKSPAGKFWQTMGFSEQGRQRLHPEEALYLLECGSIHLF-HQDLPLSIQ 393
Query: 106 EIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITS 157
E Y+ + + + ++ ++V+ HLK LGY+V R P V P R +N+ +
Sbjct: 394 EAYQLLLTDHT-VTFLQYQVFSHLKRLGYVVRRFQ-PSSVLSPYERQLNLDA 443
>gi|344291428|ref|XP_003417437.1| PREDICTED: tRNA-splicing endonuclease subunit Sen54 [Loxodonta
africana]
Length = 1035
Score = 63.2 bits (152), Expect = 8e-08, Method: Composition-based stats.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 3/118 (2%)
Query: 46 AHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLK 105
A W E G E+ GK W T G + G+ EE L+L E G++ L DL L ++
Sbjct: 93 ADWRPEEGFVELQSPAGKFWQTMGFSQQGRQRLHPEEALYLLECGSIQLF-YQDLPLSIQ 151
Query: 106 EIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQ 163
E Y+ + E + ++ ++V+ HLK LGY+V R P V P R +N+ L+
Sbjct: 152 EAYQLLLTEDT-VTFLQYQVFSHLKRLGYVVRRFQ-PSSVLSPYERQLNLDGSAQDLE 207
>gi|281350036|gb|EFB25620.1| hypothetical protein PANDA_008571 [Ailuropoda melanoleuca]
Length = 512
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 56/110 (50%), Gaps = 3/110 (2%)
Query: 46 AHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLK 105
A W E G E+ GK W T G G+ EE L+L E G++ L + DL L ++
Sbjct: 62 AEWRPEEGFVELKSPAGKFWQTMGFSEQGRQRLHPEEALYLLECGSIQLF-HQDLPLSIQ 120
Query: 106 EIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINI 155
E Y+ + E + ++ ++ + HLK LGY+V R P + P R +N+
Sbjct: 121 EAYQLLLTEDT-MTFLQYQAFSHLKRLGYVV-RRFQPSSILSPYERQLNL 168
>gi|301768977|ref|XP_002919930.1| PREDICTED: tRNA-splicing endonuclease subunit Sen54-like
[Ailuropoda melanoleuca]
Length = 528
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 56/110 (50%), Gaps = 3/110 (2%)
Query: 46 AHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLK 105
A W E G E+ GK W T G G+ EE L+L E G++ L + DL L ++
Sbjct: 78 AEWRPEEGFVELKSPAGKFWQTMGFSEQGRQRLHPEEALYLLECGSIQLF-HQDLPLSIQ 136
Query: 106 EIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINI 155
E Y+ + E + ++ ++ + HLK LGY+V R P + P R +N+
Sbjct: 137 EAYQLLLTEDT-MTFLQYQAFSHLKRLGYVV-RRFQPSSILSPYERQLNL 184
>gi|126308739|ref|XP_001377652.1| PREDICTED: tRNA-splicing endonuclease subunit Sen54 [Monodelphis
domestica]
Length = 549
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 3/120 (2%)
Query: 36 KLQFRKDISKAHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLL 95
+++ R + A W+ + G+ + GK W T G G+ EE L+L E G++ L
Sbjct: 80 RVERRGSLVTAEWSPQDGVVTLKSFAGKFWQTMGFSEGGQQRLYPEEALYLLECGSIQLF 139
Query: 96 DNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINI 155
DL L ++E YE + + + + ++V+ HLK LGY+V R P +V P R +N+
Sbjct: 140 -YQDLPLSIQEAYEMLLTQDT-IGFLQYQVFSHLKRLGYVV-RRFQPSLVPSPYERQLNL 196
>gi|149054797|gb|EDM06614.1| rCG32786, isoform CRA_a [Rattus norvegicus]
Length = 174
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
Query: 42 DISKAHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLC 101
+ A W E G E+ GK W T G G+ EE L+L E G++ L DL
Sbjct: 76 SLVAAEWRPEEGFVELTSPAGKFWQTMGYSEEGRQRLHPEEALYLLECGSIQLF-YQDLP 134
Query: 102 LPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGR 138
L ++E Y+ + E + S+ ++V+ HLK LGY+V R
Sbjct: 135 LSIQEAYQLLLTEDT-LSFLQYQVFSHLKRLGYVVRR 170
>gi|348550449|ref|XP_003461044.1| PREDICTED: tRNA-splicing endonuclease subunit Sen54 [Cavia
porcellus]
Length = 526
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 3/110 (2%)
Query: 46 AHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLK 105
A W E G+ E+ GK W T G G+ EE L+L E G++ L DL L ++
Sbjct: 80 AEWRPEEGLVELKSPAGKFWQTMGFSEEGRQLLHPEEALYLLECGSIQLF-YEDLPLSIQ 138
Query: 106 EIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINI 155
E Y+ + + ++ ++V+ HLK LGY+V R P V P R +N+
Sbjct: 139 EAYQLLLTGDT-VTFLQYQVFSHLKRLGYVVQRF-QPSSVLSPYERQLNL 186
>gi|326931089|ref|XP_003211668.1| PREDICTED: tRNA-splicing endonuclease subunit Sen54-like [Meleagris
gallopavo]
Length = 512
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 62/117 (52%), Gaps = 3/117 (2%)
Query: 41 KDISKAHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDL 100
+++ KA W E G+ E+ GK W T G GK EE L+L E G+L L D+
Sbjct: 56 ENLVKAVWKPEQGIVELESPAGKFWHTMGFSERGKQCLLPEEALYLLECGSLQLF-YKDV 114
Query: 101 CLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITS 157
+ ++E YE + ++++ S ++V+ HLK LGYIV R P V R +N+ S
Sbjct: 115 PMSVQEAYEILLSQEA-MSLLHYQVFSHLKQLGYIVLRFN-PSTVLSSCERQLNLES 169
>gi|432867361|ref|XP_004071153.1| PREDICTED: tRNA-splicing endonuclease subunit Sen54-like [Oryzias
latipes]
Length = 488
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 57/116 (49%), Gaps = 3/116 (2%)
Query: 54 MAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIAN 113
+ E+ GK W T G +GK Y EE L+L E G++ + + DL + +++ YE +
Sbjct: 80 LVELQSPAGKFWQTAGFSADGKQYLLPEEALYLMECGSVQIF-HEDLPISIQDGYEAFLS 138
Query: 114 EKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQVTPKRH 169
+ + + F+V+ HLK LGY+V R P P R +N+ PKR
Sbjct: 139 ADT-VTLQQFQVFGHLKRLGYVVHRFD-PGSEPTPYARQLNLPLSRARAGRAPKRR 192
>gi|355726523|gb|AES08899.1| tRNA splicing endonuclease 54-like protein [Mustela putorius furo]
Length = 480
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
Query: 46 AHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLK 105
A W E G + GK W T G G+ EE L+L E G++ L + DL L ++
Sbjct: 30 AEWRPEEGFVGLKSPAGKFWQTMGFSEQGRQRLHPEEALYLLECGSIQLF-HQDLPLSIQ 88
Query: 106 EIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINI 155
E Y+ + E + ++ ++ + HLK LGY+V R P + P R +N+
Sbjct: 89 EAYQLLLTEDT-VTFLQYQAFSHLKRLGYVV-RRFQPSSILSPYERQLNL 136
>gi|410903091|ref|XP_003965027.1| PREDICTED: tRNA-splicing endonuclease subunit Sen54-like [Takifugu
rubripes]
Length = 432
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 5/130 (3%)
Query: 41 KDISKAHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDL 100
++++KA+W + E+ GK W T G GK EE L+L E G L + DL
Sbjct: 73 RNLAKANWIPSEQIVELQTPAGKFWQTMGFSSEGKQRLLPEEALYLMECGNLQVF-YQDL 131
Query: 101 CLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDIN--ITSD 158
+++ YE + S S + ++V+ HLK LGY+V R P +V R +N ++ D
Sbjct: 132 PFSIQDGYESFLS-PSTVSLQQYQVFAHLKRLGYVVHRFD-PSLVPSSYTRQLNLPLSRD 189
Query: 159 PVSLQVTPKR 168
Q+ KR
Sbjct: 190 RAGRQLKRKR 199
>gi|327265017|ref|XP_003217305.1| PREDICTED: tRNA-splicing endonuclease subunit Sen54-like [Anolis
carolinensis]
Length = 554
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Query: 43 ISKAHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCL 102
+ KA W + E+ GK W T G + GK EE L+L E G++ L DL L
Sbjct: 93 LVKAEWKPGEAIVELKSPAGKFWHTMGFMDQGKQCLLPEEALYLLECGSIQLF-YKDLPL 151
Query: 103 PLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGR 138
++E YE + +KS S ++V+ HLK LGYIV R
Sbjct: 152 SIQEAYENLLTQKS-MSLLKYQVFCHLKRLGYIVLR 186
>gi|414589894|tpg|DAA40465.1| TPA: hypothetical protein ZEAMMB73_137888 [Zea mays]
Length = 134
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 34/48 (70%)
Query: 36 KLQFRKDISKAHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEET 83
++QFR S+A W E G AEVVE +GK+W TTG+ R GK Y ++EET
Sbjct: 70 RVQFRNMASRARWVEEAGAAEVVENRGKLWLTTGVTRAGKLYYNVEET 117
>gi|426239267|ref|XP_004013547.1| PREDICTED: tRNA-splicing endonuclease subunit Sen54 [Ovis aries]
Length = 603
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Query: 50 NELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYE 109
+ G E+ GK W T G G+ EE L+L E G++ L + DL L ++E Y+
Sbjct: 159 SRAGFVELKSPAGKFWQTMGFSEQGRQRLHPEEALYLLECGSIQLF-HQDLPLSIQEAYQ 217
Query: 110 KIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITS 157
+ E + ++ ++V+ HLK LGY+V R P V P R +N+ S
Sbjct: 218 LLLTEDT-VTFLQYQVFSHLKRLGYVV-RRFQPSSVLSPYERQLNLDS 263
>gi|147902427|ref|NP_001086697.1| tRNA splicing endonuclease 54 homolog [Xenopus laevis]
gi|50414822|gb|AAH77322.1| MGC80279 protein [Xenopus laevis]
Length = 517
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 58/114 (50%), Gaps = 5/114 (4%)
Query: 45 KAHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPL 104
K+ W + + E+ GK W T G GK EE ++L E GA+ + D L +
Sbjct: 63 KSVWRPKEDLVELTSPAGKFWQTMGFTYQGKQCLLPEEAVYLLECGAVQIF-YRDSPLSV 121
Query: 105 KEIYEK-IANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITS 157
+E YE+ + N+K ++VY HLK LGYIV R P V+ P R +N+ S
Sbjct: 122 QEAYERLLGNQKFPVLH--YQVYSHLKRLGYIVTRFD-PSSVQSPYHRQLNLES 172
>gi|118099953|ref|XP_420129.2| PREDICTED: tRNA-splicing endonuclease subunit Sen54 [Gallus gallus]
Length = 512
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 61/116 (52%), Gaps = 3/116 (2%)
Query: 42 DISKAHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLC 101
++ KA W E + E+ GK W T G GK EE L+L E G+L L D+
Sbjct: 57 NLVKAVWKPEQSVVELESPAGKFWHTMGFSERGKQCLLPEEALYLLECGSLQLF-YKDVP 115
Query: 102 LPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITS 157
+ ++E YE + ++++ + ++V+ HLK LG+IV R P V P R +N+ S
Sbjct: 116 MSVREAYEILLSQEA-MNLLHYQVFSHLKQLGFIVLRFN-PSTVLSPYERQLNLES 169
>gi|351707854|gb|EHB10773.1| tRNA-splicing endonuclease subunit Sen54 [Heterocephalus glaber]
Length = 520
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 54/110 (49%), Gaps = 3/110 (2%)
Query: 46 AHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLK 105
A W E E+ GK W T G G EE L+L E G++ L + DL L ++
Sbjct: 75 AEWRPEEDFVELKSPAGKFWQTMGFSEQGHQRLHPEEALYLLECGSIQLF-HQDLPLSIQ 133
Query: 106 EIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINI 155
E Y+ + + ++ ++V+ HLK LGY+V R P V P R +N+
Sbjct: 134 EAYQLLLTGDT-VTFLQYQVFSHLKRLGYVV-RRFQPSSVLSPYERQLNL 181
>gi|307106273|gb|EFN54519.1| hypothetical protein CHLNCDRAFT_135249 [Chlorella variabilis]
Length = 416
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 60/133 (45%), Gaps = 31/133 (23%)
Query: 41 KDISKAHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDL 100
+D++ A W ELG+AEVV +KGK+ G +R K Y IEE A+YLLD +L
Sbjct: 52 RDLAAAIWRPELGLAEVVLQKGKLLAHMGFMRGSKLYLFIEE--------AVYLLDRANL 103
Query: 101 CLPLKEIYEKIANE-----------------------KSGCSWELFEVYRHLKSLGYIVG 137
L L + + + +G S + + V+ L GYIV
Sbjct: 104 LLFLHQAHSGTDSSGRRWQQSQQQRLLSLAEAHDLMLATGVSMDRYLVFCKLLRAGYIVQ 163
Query: 138 RHGVPWIVKIPKG 150
RH W+++ +G
Sbjct: 164 RHPARWLLRPGEG 176
>gi|322788447|gb|EFZ14116.1| hypothetical protein SINV_04580 [Solenopsis invicta]
Length = 799
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 56/106 (52%), Gaps = 2/106 (1%)
Query: 34 ISKLQFRKDISKAHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALY 93
I +++ +++ A W A V ++ G+ W+ G+ RNG Y EETLFL E L
Sbjct: 72 IERVERISELACAEWLPSQKRARVTKRSGQDWSNFGLERNGSLYLLAEETLFLMETNCLE 131
Query: 94 LLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRH 139
L+ N C +++ YE + ++ S C+ E + VY L GY + R+
Sbjct: 132 LIWNGLSC-SIQQAYEILLDD-SACTLEEYRVYSQLTRYGYRIQRY 175
>gi|354466567|ref|XP_003495745.1| PREDICTED: tRNA-splicing endonuclease subunit Sen54-like
[Cricetulus griseus]
Length = 605
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 4/98 (4%)
Query: 41 KDISKAHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDL 100
+D +A +E G ++ GK W T G G+ EE L+L E G++ L DL
Sbjct: 158 RDTGQA--GSEEGFVQLTSPAGKFWQTMGYSEQGQQRLHPEEALYLLECGSIQLF-YQDL 214
Query: 101 CLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGR 138
L ++E Y+ + E + S+ ++V+ HLK LGY+V R
Sbjct: 215 PLSIQEAYQLLLTEDT-LSFLHYQVFSHLKRLGYVVRR 251
>gi|348510002|ref|XP_003442535.1| PREDICTED: tRNA-splicing endonuclease subunit Sen54-like
[Oreochromis niloticus]
Length = 512
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
Query: 42 DISKAHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLC 101
++ K W + E+ GK W T G NGK EE L+L E G L + DL
Sbjct: 74 NLVKGEWIPSEQIVELQSPAGKFWQTMGFSANGKQCLLPEEALYLMECGNLQVF-YQDLP 132
Query: 102 LPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGR 138
L +++ YEK + + S + ++V+ HLK LGY+V R
Sbjct: 133 LSIQDGYEKFLSANT-VSLQQYQVFGHLKRLGYVVLR 168
>gi|344236244|gb|EGV92347.1| tRNA-splicing endonuclease subunit Sen54 [Cricetulus griseus]
Length = 629
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Query: 51 ELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEK 110
E G ++ GK W T G G+ EE L+L E G++ L DL L ++E Y+
Sbjct: 162 EEGFVQLTSPAGKFWQTMGYSEQGQQRLHPEEALYLLECGSIQLF-YQDLPLSIQEAYQL 220
Query: 111 IANEKSGCSWELFEVYRHLKSLGYIVGR 138
+ E + S+ ++V+ HLK LGY+V R
Sbjct: 221 LLTEDT-LSFLHYQVFSHLKRLGYVVRR 247
>gi|359482135|ref|XP_002278658.2| PREDICTED: uncharacterized protein LOC100258924 [Vitis vinifera]
Length = 43
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/31 (80%), Positives = 27/31 (87%)
Query: 54 MAEVVEKKGKMWTTTGIVRNGKTYCSIEETL 84
MA VVEKKGK+W TTG+VRN KTYCSIEET
Sbjct: 1 MAAVVEKKGKIWITTGVVRNSKTYCSIEETF 31
>gi|443688487|gb|ELT91160.1| hypothetical protein CAPTEDRAFT_229033 [Capitella teleta]
Length = 461
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 3/105 (2%)
Query: 36 KLQFRKDISKAHWNNELGMAEVVEKK-GKMWTTTGIVRNGKTYCSIEETLFLAEIGALYL 94
++Q K ++KA W+ EV+ K + W G V G+ + EE LFL + G + +
Sbjct: 59 RVQVSKTLTKAQWDPVAQKVEVISKAMHQFWKVMGHVEEGRFWLQPEEALFLMDEGVVEI 118
Query: 95 LDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRH 139
+ ++ L L++ Y N S E ++VY HL LGYIV RH
Sbjct: 119 Y-HGEVPLSLQQAYGMFLN-CSTLPPERYQVYSHLCRLGYIVRRH 161
>gi|443900185|dbj|GAC77512.1| predicted tRNA-splicing endonuclease subunit [Pseudozyma antarctica
T-34]
Length = 649
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 28/166 (16%)
Query: 22 EIDEEDYYMSGFISKLQFRKDISKAHWNNELGMAEVVEKKGKMWTTTGIVR-------NG 74
E + Y + S+ + + +A WN A + + +GK++ T G++R G
Sbjct: 115 ERSRQAMYQAVSGSRTVGSRSLVRATWNPHTRRARIHDVQGKIFETVGVIRRTPTTDSTG 174
Query: 75 KTYCSI------EETLFLAEIGALYL---LDNNDLCLP--LKEIYEK--IANEKSG---C 118
KT EE LFLAE G+L + +++D P L++ + +A++++
Sbjct: 175 KTVTQATNELLPEEALFLAERGSLQIYTQAEDSDALAPMSLQQAFAALMLASDEAADEPL 234
Query: 119 SWELFEVYRHLKSLGYIVGRHGVPWIVK---IP--KGRDINITSDP 159
+ E + +Y HLK LGY+V R + V+ IP K R I +DP
Sbjct: 235 TREAYLIYAHLKRLGYVVQRASIVDAVRAAPIPPSKARAQGIVADP 280
>gi|332017031|gb|EGI57830.1| tRNA-splicing endonuclease subunit Sen54 [Acromyrmex echinatior]
Length = 796
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Query: 42 DISKAHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLC 101
+++ A W A V ++ G+ W+ G+ RNG Y EE LFL E L L+ N C
Sbjct: 80 ELASAEWLPSQKRALVTKRSGQDWSNFGLERNGSLYLLPEEALFLIETNCLELIWNGLSC 139
Query: 102 LPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRH 139
+++ YE + ++ S C+ E + VY L GY + R+
Sbjct: 140 -SIQQAYEILIDD-SVCTLEEYRVYSQLTRYGYRIQRY 175
>gi|357612466|gb|EHJ68012.1| putative tRNA splicing endonuclease 54-like protein [Danaus
plexippus]
Length = 832
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
Query: 34 ISKLQFRKDISKAHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALY 93
I +++ + +S A W + L +AEV K G W G + Y EE LFL E+ LY
Sbjct: 94 IQRIEKKGAMSHAVWKDNLKLAEVTHKVGGHWQHMGHNIGKQLYIRAEEILFLMELNCLY 153
Query: 94 LLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRH 139
ND+ + L++ Y S + ++VY L LGY V RH
Sbjct: 154 -FKFNDVVVSLQQAYSLFLG--PLISHQQYKVYASLSRLGYRVYRH 196
>gi|452821061|gb|EME28096.1| tRNA-splicing endonuclease subunit Sen54 isoform 1 [Galdieria
sulphuraria]
Length = 236
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
Query: 40 RKDISKAHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNND 99
R++++ A W+ E A V KGK++ T G + K Y E LFL +IG L L +
Sbjct: 53 RRNLAVATWDAERLEAMVKVPKGKIFQTLGYFESSKQYLDPLEVLFLVDIGILQ-LQVGE 111
Query: 100 LCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIV 136
++ Y+ +A E +G W F VY HL+ LG+IV
Sbjct: 112 TTASVQLAYQ-LAVE-AGVDWNAFLVYAHLRRLGFIV 146
>gi|452821062|gb|EME28097.1| tRNA-splicing endonuclease subunit Sen54 isoform 2 [Galdieria
sulphuraria]
Length = 243
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
Query: 40 RKDISKAHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNND 99
R++++ A W+ E A V KGK++ T G + K Y E LFL +IG L L +
Sbjct: 60 RRNLAVATWDAERLEAMVKVPKGKIFQTLGYFESSKQYLDPLEVLFLVDIGILQ-LQVGE 118
Query: 100 LCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIV 136
++ Y+ +A E +G W F VY HL+ LG+IV
Sbjct: 119 TTASVQLAYQ-LAVE-AGVDWNAFLVYAHLRRLGFIV 153
>gi|307189196|gb|EFN73644.1| tRNA-splicing endonuclease subunit Sen54 [Camponotus floridanus]
Length = 807
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 55/106 (51%), Gaps = 2/106 (1%)
Query: 34 ISKLQFRKDISKAHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALY 93
I +++ +++ A W A V ++ G+ W G+ +NG Y EETLFL E L
Sbjct: 72 IERVERISELASAEWIPSQKKALVTKRSGQEWNNFGLEKNGSLYLLPEETLFLIETNCLE 131
Query: 94 LLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRH 139
L+ N C +++ YE + ++ S C+ + + VY L GY + R+
Sbjct: 132 LIWNGVPC-SIQQAYEILIDD-SVCTLDEYRVYSQLTRYGYRIQRY 175
>gi|440803060|gb|ELR23972.1| hypothetical protein ACA1_143320 [Acanthamoeba castellanii str.
Neff]
Length = 202
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 13 SDNEDSYVDEIDEEDYYMSGFISKLQFRKDISKAHWNNELGMAEVVEKKGKMWTTTGIVR 72
D E+ E E Y G + +S+ W +L + ++ KG+ + T G
Sbjct: 5 GDEEEVKGAEAVESWYNALGLPKPFTAPRRLSEGVWRPDLRLVQLTTNKGQWFKTMGFSH 64
Query: 73 NGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSL 132
+ + +EE +FLA+ L +L ++D+ L L +++ ++ + G + + Y HL L
Sbjct: 65 GKEEFYHVEEAVFLADQALLRIL-HHDVELSLAQVFRLLS--EGGVPLDHYIAYAHLTRL 121
Query: 133 GYIVGRHGVP 142
G+I+ R +P
Sbjct: 122 GFILARTRLP 131
>gi|307204249|gb|EFN83046.1| tRNA-splicing endonuclease subunit Sen54 [Harpegnathos saltator]
Length = 814
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 62/122 (50%), Gaps = 2/122 (1%)
Query: 34 ISKLQFRKDISKAHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALY 93
I +++ +++ A W A V +K G+ W++ GI +NG Y EE LFL E L
Sbjct: 72 IERVERVSELASAEWIPSQKKALVTKKSGQDWSSFGIDKNGSLYLIPEEALFLLETNCLE 131
Query: 94 LLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDI 153
L+ N C +++ YE + +++ C+ + + VY L GY + R+ VK K D
Sbjct: 132 LIWNGVPC-SIQQAYEILIDDEV-CTLDEYRVYSQLTRCGYRMQRYVYEESVKNDKSDDS 189
Query: 154 NI 155
++
Sbjct: 190 SV 191
>gi|213402499|ref|XP_002172022.1| tRNA-splicing endonuclease subunit sen54 [Schizosaccharomyces
japonicus yFS275]
gi|212000069|gb|EEB05729.1| tRNA-splicing endonuclease subunit sen54 [Schizosaccharomyces
japonicus yFS275]
Length = 411
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 87/224 (38%), Gaps = 41/224 (18%)
Query: 34 ISKLQFRKDISKAHWNNELGMAEVVEKKGKMWTTTG-IVRNGKTYCSIEETLFLAEIGAL 92
+ +L K + +A W + AEV+ G M+ T G N + EET++L E G++
Sbjct: 74 VERLIPAKTVIQAVWRPQQQKAEVLHAHGPMFKTMGHATSNNSVWLLPEETVYLVERGSM 133
Query: 93 YLLDNNDLCLPLKEIYEKIANEKSGC-SWELFEVYRHLKSLGYIVGRHGVP--------W 143
+ + L+ +Y A + C E + VY HL+ G+ V R P
Sbjct: 134 ECWCEEGIPMSLQHVY---AEAIAACGGLEYYHVYAHLRRCGFTVVRSKQPSPEDVEAYQ 190
Query: 144 IVKIPKGRDINITS--------------------DPVSLQ--VTPKRHGVMDVEPKEESS 181
+ K GR + P S++ + P R + E+
Sbjct: 191 LKKQMYGRSLRTLMLDLKSKLLNFSFVAFQRLWFSPSSMKKSMLPDRTYRSYEQIYEQIQ 250
Query: 182 LVALFYNIQINEVRP------VFDVYLPNRKFKKSCPGDPSFLL 219
VA + V P FDVY P+ FKKS PG+P F +
Sbjct: 251 FVAGYTPQPKAPVLPDLPFRNAFDVYKPSASFKKSAPGEPDFTV 294
>gi|281204309|gb|EFA78505.1| hypothetical protein PPL_09157 [Polysphondylium pallidum PN500]
Length = 476
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 56/118 (47%), Gaps = 7/118 (5%)
Query: 28 YYMSGFISKL------QFRKDISKAHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIE 81
YY ++ KL +S+A + + V+ +KG+ + + G GK Y IE
Sbjct: 64 YYRDRYLIKLLLICIKSISNQLSRAEYQEQTKTFLVINRKGRYYESMGHTVGGKLYLHIE 123
Query: 82 ETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRH 139
E ++LA IGA+ + D L L+E Y+ + + ++VY LK GY + R+
Sbjct: 124 EAMYLASIGAMEIY-YKDAPLVLQECYKLFETDYCNFPFSNYQVYSFLKKQGYHLLRY 180
>gi|350412198|ref|XP_003489569.1| PREDICTED: hypothetical protein LOC100750076 [Bombus impatiens]
Length = 830
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 43 ISKAHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCL 102
++ A W E A+V + G+ W++ G+ ++G Y EE LFL E L L ND+ L
Sbjct: 81 LASAEWLPEQKRAKVTKYSGQDWSSFGLEKSGTLYLIPEEALFLLEANCLELTW-NDVAL 139
Query: 103 PLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGR 138
+++ Y+ + + CS E + VY L GY + R
Sbjct: 140 SIQQAYDLLI-DNVECSLEEYRVYSQLVRYGYRIQR 174
>gi|395330918|gb|EJF63300.1| hypothetical protein DICSQDRAFT_102452 [Dichomitus squalens
LYAD-421 SS1]
Length = 464
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 55/130 (42%), Gaps = 30/130 (23%)
Query: 41 KDISKAHWNNELGMAEVVEKKGKMWTTTG--IVRNGKTYCSI-----------EETLFLA 87
K +S A W +L A V +G + T G + R T S+ EE L+L
Sbjct: 92 KSVSHAIWYPQLKRAHVTVARGIHFITMGHSVARPSATSESVKKIQRRLELLPEEALYLV 151
Query: 88 EIGALYLLDNNDLCLPLKEIY---------------EKIANEKSGCSWELFEVYRHLKSL 132
E GA+Y DL LP E+ E I E ++E ++VY +LK L
Sbjct: 152 ERGAMYCWSPTDLPLPKSELLDDLEGIPMSVQQAYTEMIGTED--LTFERYQVYAYLKRL 209
Query: 133 GYIVGRHGVP 142
GY+V R P
Sbjct: 210 GYVVTRTTPP 219
>gi|156403005|ref|XP_001639880.1| predicted protein [Nematostella vectensis]
gi|156227011|gb|EDO47817.1| predicted protein [Nematostella vectensis]
Length = 326
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 88/223 (39%), Gaps = 43/223 (19%)
Query: 40 RKDISKAHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNND 99
R ++S W E M ++ KG W G+ N + + EE LFL E G+L L
Sbjct: 63 RGNLSVGIWVPEKAMIKIEAAKGTHWNHFGVTINSVLWAAPEEALFLLEQGSLELY-YGG 121
Query: 100 LCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDP 159
+ L L++ + + + + + VY +L LG+IV +H R N T+D
Sbjct: 122 MPLTLQQAFSILLPHM--FTLDHYIVYAYLLRLGFIVVKHHKK---SFRGSRQSNATADE 176
Query: 160 ---VSLQVTPKRHGVMD--------------------VEPKEESSLVALFYNIQINEVRP 196
S V+ V D + P + S A+ +Q+ + +
Sbjct: 177 KGNRSTDVSSSSIQVSDTIMSSPAACLWKDESGCKPLLRPSDARSTAAVLSKLQVVKTQR 236
Query: 197 V-------------FDVYLPNRKFKKSCPGDPSFLLYLTCKYV 226
+ FDVY P +KK+ PG P ++ C+++
Sbjct: 237 MTSTAAQASKYLIAFDVYQPGSGYKKTTPGSP-YICICICRFL 278
>gi|195493787|ref|XP_002094563.1| GE20138 [Drosophila yakuba]
gi|194180664|gb|EDW94275.1| GE20138 [Drosophila yakuba]
Length = 524
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 91/234 (38%), Gaps = 70/234 (29%)
Query: 46 AHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLC---L 102
A WN E +AEV+ K GK + G GK Y E +FL E+G L L + C +
Sbjct: 80 AIWNAEQQVAEVIRKDGK-FENFGYSEQGKLYLEYYEAMFLLEVGRLQL----EYCGSVV 134
Query: 103 PLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIP-------------- 148
+++ Y + E + + VY L GYIV +H P +IP
Sbjct: 135 SIEQAYVLLLGELESERYSNYLVYSALSRSGYIVVKHVRPQ--EIPQEVTKKRMEDVKER 192
Query: 149 ----KGRDINITSDPVSLQVTPKRHGVMDVEP-KEESS---------------------- 181
K D NI + + LQ +R + D P KE +S
Sbjct: 193 ITSQKTEDPNIVVERIDLQFG-QRKRMADERPIKEPASKKEKLSTQGRSLVDQLKSEFTY 251
Query: 182 -----LVALFYNIQI-------------NEVRPVFDVYLPNRKFKKSCPGDPSF 217
+ F +Q+ + ++ +FD++L N+ FKKS P P+F
Sbjct: 252 AKFEDIFEKFEMVQLKTQDYTKEELDTPSALKIIFDLHLHNKGFKKSAPTTPNF 305
>gi|297739628|emb|CBI29810.3| unnamed protein product [Vitis vinifera]
Length = 64
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 33/48 (68%)
Query: 175 EPKEESSLVALFYNIQINEVRPVFDVYLPNRKFKKSCPGDPSFLLYLT 222
E K++ S++ L N+ I +V+ VFDVYLPN KF+KS GDPS ++
Sbjct: 5 ESKDKISIIELVNNVHITKVKLVFDVYLPNSKFRKSFSGDPSIPYFIN 52
>gi|66809041|ref|XP_638243.1| hypothetical protein DDB_G0285335 [Dictyostelium discoideum AX4]
gi|60466691|gb|EAL64742.1| hypothetical protein DDB_G0285335 [Dictyostelium discoideum AX4]
Length = 588
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 8/104 (7%)
Query: 40 RKDISKAHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGA--LYLLDN 97
+ +S HW++ L E+ +KGK + + G K Y IEE ++ ++G LY+
Sbjct: 119 KNSMSYGHWDSNLKKFEITLRKGKQFDSVGQQIGSKLYLHIEEAIYFQDLGIVELYI--- 175
Query: 98 NDLCLPLKEIYEKIANEKSGCSWELFE--VYRHLKSLGYIVGRH 139
N L L ++E + K+ S + +++ Y +LK LGYI+ RH
Sbjct: 176 NQLPLSVQESF-KLFEIPSPSPFPIYKYTAYCYLKKLGYILIRH 218
>gi|383859752|ref|XP_003705356.1| PREDICTED: uncharacterized protein LOC100882338 [Megachile
rotundata]
Length = 826
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 43 ISKAHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCL 102
++ A W A+V + G+ W++ G+ +NG Y EE LFL E L L ND+ L
Sbjct: 81 LASAEWLPAQKRAKVKKHSGQDWSSFGLEKNGALYLIPEEALFLLEANCLELTW-NDVPL 139
Query: 103 PLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGR 138
+++ Y+ + + CS E + VY L GY + R
Sbjct: 140 SIQQAYDLLI-DNIECSLEEYRVYSQLVRYGYHIQR 174
>gi|225581212|gb|ACN94779.1| GA19014 [Drosophila miranda]
Length = 539
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 46 AHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLK 105
A W+ E AE++ K GK + G +GK Y E LFL E+G L L + +D+ + ++
Sbjct: 81 ASWDEEQQAAEILRKDGK-FGCFGYSVHGKLYLEYYEALFLLELGRLQL-EYHDVTVSVE 138
Query: 106 EIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRH 139
+ Y + E + + VY L GYIV RH
Sbjct: 139 QAYVLLLGELESEKYHNYLVYSALSRAGYIVVRH 172
>gi|430812010|emb|CCJ30537.1| unnamed protein product [Pneumocystis jirovecii]
Length = 367
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 2/99 (2%)
Query: 40 RKDISKAHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNND 99
RK SKA W + +A+V +G + + G N + EE ++L E G+L N
Sbjct: 68 RKIYSKAIWVPSVKLAKVERIRGTQFKSLGKFINNSIWLLPEELIYLVERGSLECWWENG 127
Query: 100 LCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGR 138
+ + L+ +Y E G +E ++VY +LK LGY + R
Sbjct: 128 IPMSLQAVYSVCLEECGG--FEQYQVYSYLKRLGYYIFR 164
>gi|195014263|ref|XP_001983991.1| GH15259 [Drosophila grimshawi]
gi|193897473|gb|EDV96339.1| GH15259 [Drosophila grimshawi]
Length = 383
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Query: 46 AHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLK 105
AHW+ + AEV+ K GK + + G + GK Y E LFL E+ L L+ ++ + ++
Sbjct: 76 AHWHEDQQAAEVLRKDGK-FESFGYSKQGKLYLEYYEALFLLELNRLQ-LEYCEMIVSVE 133
Query: 106 EIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRH 139
+ Y + E + + + VY L GYIV +H
Sbjct: 134 QAYVLLLGEAASEKFNNYLVYSTLSRAGYIVVKH 167
>gi|21753535|dbj|BAC04362.1| unnamed protein product [Homo sapiens]
Length = 177
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 42 DISKAHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLC 101
+ A W E G E+ GK W T G G+ EE L+L E G+++L + DL
Sbjct: 76 SLVAAEWRPEEGFVELKSPAGKFWQTMGFSEQGRQRLHPEEALYLLECGSIHLF-HQDLP 134
Query: 102 LPLKEIYEKIANEKS 116
L ++E Y+ + + +
Sbjct: 135 LSIQEAYQLLLTDHT 149
>gi|385719264|gb|AFI71930.1| SD01208p1 [Drosophila melanogaster]
Length = 380
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 4/132 (3%)
Query: 13 SDNEDSYVDEIDEEDYYMSGFIS--KLQFRKDISKAHWNNELGMAEVVEKKGKMWTTTGI 70
+D + V+E+ Y+ +S +++ + A WN+E +AEV K GK + G
Sbjct: 42 NDGTAAEVEELKRAQEYLRAQLSVPRIERLGGRALAIWNDEQQVAEVKRKDGK-FENFGY 100
Query: 71 VRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLK 130
GK Y E +FL E+G L L+ L + +++ Y + E + + VY L
Sbjct: 101 SEQGKLYLEYYEAMFLLEVGRLQ-LEYCGLVVSIEQAYVLLLGELESERYTNYLVYSALS 159
Query: 131 SLGYIVGRHGVP 142
GYIV +H P
Sbjct: 160 RSGYIVVKHVPP 171
>gi|380028352|ref|XP_003697868.1| PREDICTED: uncharacterized protein LOC100864327 [Apis florea]
Length = 813
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Query: 42 DISKAHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLC 101
++ A W A+V + G+ W++ G+ ++G Y EE LFL E L L ND+
Sbjct: 80 QLASAEWLPAQKRAKVKKYSGQDWSSFGLEKSGTLYLIPEEALFLLETNCLELTW-NDVS 138
Query: 102 LPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGR 138
L +++ YE + + CS E + VY L GY + R
Sbjct: 139 LSIQQAYELLI-DNVECSLEEYRVYSQLIRHGYRIQR 174
>gi|195127429|ref|XP_002008171.1| GI11967 [Drosophila mojavensis]
gi|193919780|gb|EDW18647.1| GI11967 [Drosophila mojavensis]
Length = 526
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Query: 46 AHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLK 105
A W+++ AEVV K GK + + G + GK Y E LFL E+ L L + L + ++
Sbjct: 78 AIWSDDQQAAEVVRKDGK-FESFGYSQQGKLYLEYYEALFLLELNRLQL-EYCGLIVSIE 135
Query: 106 EIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRH 139
+ Y + E++ + + VY L GYIV RH
Sbjct: 136 QAYVLLLGEEASEKYNNYFVYSALSRAGYIVVRH 169
>gi|198464759|ref|XP_001353358.2| GA19014 [Drosophila pseudoobscura pseudoobscura]
gi|198149866|gb|EAL30865.2| GA19014 [Drosophila pseudoobscura pseudoobscura]
Length = 539
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 46 AHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLK 105
A W+ E AE++ K GK + + G K Y E LFL E+G L L + +D+ + ++
Sbjct: 81 ASWDEEQHAAEILRKDGK-FGSFGYSVQSKLYLEYYEALFLLELGRLQL-EYHDMTVSVE 138
Query: 106 EIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRH 139
+ Y + E + + VY L GYIV RH
Sbjct: 139 QAYVLLLGELESEKYHNYLVYSALSRAGYIVVRH 172
>gi|390361355|ref|XP_001198123.2| PREDICTED: uncharacterized protein LOC762484 [Strongylocentrotus
purpuratus]
Length = 1112
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 3/113 (2%)
Query: 27 DYYMSGFISKLQFRKDISKAHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFL 86
+Y + +K + +S W + + V KGK W T G + G+ Y EE LFL
Sbjct: 411 NYESTDAETKTTYHGTLSVGEWEPDKELVVVKNHKGKFWRTMGYMLQGQKYLYPEEGLFL 470
Query: 87 AEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRH 139
E+G++ L L ++ Y + + E + VY +L LGYI RH
Sbjct: 471 LEVGSME-LQYGGTPLSVQRAYNLMI--PTYIDKEHYRVYCNLMRLGYITTRH 520
>gi|195160483|ref|XP_002021105.1| GL25009 [Drosophila persimilis]
gi|194118218|gb|EDW40261.1| GL25009 [Drosophila persimilis]
Length = 539
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 46 AHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLK 105
A W+ E AE++ K GK + + G K Y E LFL E+G L L + +D+ + ++
Sbjct: 81 ASWDEEQQAAEILRKDGK-FGSFGYSVQSKLYLEYYEALFLLELGRLQL-EYHDVTVSVE 138
Query: 106 EIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRH 139
+ Y + E + + VY L GYIV RH
Sbjct: 139 QAYVLLLGELESEKYHNYLVYSALSRAGYIVVRH 172
>gi|326432825|gb|EGD78395.1| hypothetical protein PTSG_09463 [Salpingoeca sp. ATCC 50818]
Length = 453
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 49/102 (48%), Gaps = 9/102 (8%)
Query: 41 KDISKAHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCS----IEETLFLAEIGALYLLD 96
K +S A W E G+A+V+ KG T G + Y S EE LFL + G L +
Sbjct: 104 KRMSMAVWRPECGLAQVILAKGTHPQTMGQFH--REYRSDMLYPEEALFLVDRGVLEMY- 160
Query: 97 NNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGR 138
+ND L +E + S S + VY HLK LGYIV R
Sbjct: 161 HNDAPLSFQEAMALCLSTSS--SLRAYIVYAHLKRLGYIVLR 200
>gi|193783579|dbj|BAG53490.1| unnamed protein product [Homo sapiens]
Length = 197
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 69 GIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRH 128
G G+ EE L+L E G+++L + DL L ++E Y+ + + + ++ ++V+ H
Sbjct: 2 GFSEQGRQRLHPEEALYLLECGSIHLF-HQDLPLSIQEAYQLLLTDHT-VTFLQYQVFSH 59
Query: 129 LKSLGYIVGRHGVPWIVKIPKGRDINI 155
LK LGY+V R P V P R +N+
Sbjct: 60 LKRLGYVV-RRFQPSSVLSPYERQLNL 85
>gi|403280834|ref|XP_003931913.1| PREDICTED: tRNA-splicing endonuclease subunit Sen54 [Saimiri
boliviensis boliviensis]
Length = 528
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 46 AHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLK 105
A W E G E+ GK W T G G+ EE L+L E G++ L + DL L ++
Sbjct: 84 AEWRPEEGFVELKSPAGKFWQTMGFSEQGRQRLHPEEALYLLECGSIQLF-HQDLPLSIQ 142
Query: 106 EIYE 109
E Y+
Sbjct: 143 EAYQ 146
>gi|395826862|ref|XP_003786633.1| PREDICTED: tRNA-splicing endonuclease subunit Sen54 [Otolemur
garnettii]
Length = 521
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 46 AHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLK 105
A W E G E+ GK W T G G+ EE L+L E G+L L DL L ++
Sbjct: 80 AEWRPEEGFVELKSPAGKFWQTMGFSEQGRQRLYPEEALYLLECGSLQLF-YQDLPLSIQ 138
Query: 106 EIYEKIANE 114
E Y+ + E
Sbjct: 139 EAYQLLLTE 147
>gi|50545317|ref|XP_500196.1| YALI0A18293p [Yarrowia lipolytica]
gi|49646061|emb|CAG84128.1| YALI0A18293p [Yarrowia lipolytica CLIB122]
Length = 385
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Query: 41 KDISKAHWNNELGMAEVVEKKGKMWTTTGIV-RNGKTYCSIEETLFLAEIGALYLLDNND 99
K+ +A W +EL A+V +G + T G GK + EET++L E G++ L N
Sbjct: 76 KNHVRAVWFDELQKAQVDVARGPHFKTIGTSDSQGKVWLYPEETIYLLERGSMELFWPNG 135
Query: 100 LCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGR 138
+ + L+ Y A + + Y HLK G++V R
Sbjct: 136 VQISLQGAYAVCAGKMGEDGIDKIHTYSHLKRAGFVVQR 174
>gi|24663212|ref|NP_648559.1| CG5626 [Drosophila melanogaster]
gi|23096160|gb|AAF49941.2| CG5626 [Drosophila melanogaster]
Length = 383
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Query: 46 AHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLK 105
A WN E +AEV K GK + G GK Y E +FL E+G L L+ L + ++
Sbjct: 80 AIWNEEQQVAEVKRKDGK-FENFGYSEQGKLYLEYYEAMFLLEVGRLQ-LEYCGLVVSIE 137
Query: 106 EIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVP 142
+ Y + E + + VY L GYIV +H P
Sbjct: 138 QAYVLLLGELESERYTNYLVYSALSRSGYIVVKHVPP 174
>gi|194747143|ref|XP_001956012.1| GF24994 [Drosophila ananassae]
gi|190623294|gb|EDV38818.1| GF24994 [Drosophila ananassae]
Length = 555
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Query: 46 AHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLK 105
A WN + +AEV+ K GK + G + GK + E LFL E+G L L+ + ++
Sbjct: 76 ATWNKDQQVAEVLRKDGK-FENFGHSKQGKLFLEYYEALFLLEVGRLQ-LEYCGTIVSIE 133
Query: 106 EIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIP 148
+ Y + E + + VY L GYIV RH +P
Sbjct: 134 QAYVLLLGESESERFTHYLVYSALSRAGYIVVRHQAVQEAPVP 176
>gi|328780760|ref|XP_001121123.2| PREDICTED: hypothetical protein LOC725252 [Apis mellifera]
Length = 813
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 43 ISKAHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCL 102
++ A W A+V + G+ W++ G+ ++G Y EE LFL E L L ND+ L
Sbjct: 81 LASAEWLPAQKRAKVKKYSGQDWSSFGLEKSGILYLIPEEALFLLETNCLELTW-NDVSL 139
Query: 103 PLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGR 138
+++ YE + + CS E + VY L GY + R
Sbjct: 140 SIQQAYELLI-DNIECSLEEYRVYSQLIRHGYRIQR 174
>gi|296424143|ref|XP_002841609.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637854|emb|CAZ85800.1| unnamed protein product [Tuber melanosporum]
Length = 395
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 50/105 (47%), Gaps = 9/105 (8%)
Query: 40 RKDISKAH----WNNELGMAEVVEKKGKMWTTTGIV-RNGKTYCSIEETLFLAEIGALYL 94
RK SK H W MAEV +G + T G R G + EET++L E G L
Sbjct: 77 RKHSSKQHVSATWRPSQRMAEVHVARGPHFKTVGKADRRGVLWLLPEETIYLVERGNLEC 136
Query: 95 LDNNDLCLPLKEIYEKIANEKSGCS-WELFEVYRHLKSLGYIVGR 138
+ + L+ +Y A+ GC E ++VY +LK GYI+ R
Sbjct: 137 WWEEGVPMSLQGVY---ASALDGCGGLERYQVYTYLKRAGYILAR 178
>gi|323455323|gb|EGB11191.1| hypothetical protein AURANDRAFT_61507 [Aureococcus anophagefferens]
Length = 271
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 47/116 (40%), Gaps = 29/116 (25%)
Query: 48 WNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPL--K 105
W +LGMA+++ +GK T G+ +G EE L+L E L LL + D PL +
Sbjct: 48 WCPDLGMAKLLRTRGKQLRTMGVSIDGSVCLFGEEALYLCERALLVLLPSEDAAEPLHAR 107
Query: 106 EIY---------------------------EKIANEKSGCSWELFEVYRHLKSLGY 134
E+Y A + C + VY HL+SLGY
Sbjct: 108 EVYGVCVAGAPAAPAGEAPAAAPAGAAPPPAAAAPRHAPCPLHCYWVYAHLRSLGY 163
>gi|374110120|gb|AEY99025.1| FAGR205Cp [Ashbya gossypii FDAG1]
Length = 455
Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 14/107 (13%)
Query: 41 KDISKAHWNNELGMAEVVEKKGKMWTTTGIV-RNGKTYCSIEETLFLAEIGAL--YLL-- 95
K + KA+W E MA + +G T G V ++G+ + + E ++L E G + YL
Sbjct: 83 KTLIKAYWEEEQRMARIPNARGSFTNTMGKVDKHGQCWLQLHEFVYLVERGTVSPYLALT 142
Query: 96 ------DNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIV 136
++ D+ L ++++Y + S + F VY HLK LG+IV
Sbjct: 143 VGDEKSNHEDVLLSVQDVYALFS---STEELDEFLVYAHLKRLGFIV 186
>gi|45201301|ref|NP_986871.1| AGR205Cp [Ashbya gossypii ATCC 10895]
gi|50401467|sp|Q74ZJ5.1|SEN54_ASHGO RecName: Full=tRNA-splicing endonuclease subunit SEN54; AltName:
Full=tRNA-intron endonuclease SEN54
gi|44986155|gb|AAS54695.1| AGR205Cp [Ashbya gossypii ATCC 10895]
Length = 455
Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 14/107 (13%)
Query: 41 KDISKAHWNNELGMAEVVEKKGKMWTTTGIV-RNGKTYCSIEETLFLAEIGAL--YLL-- 95
K + KA+W E MA + +G T G V ++G+ + + E ++L E G + YL
Sbjct: 83 KTLIKAYWEEEQRMARIPNARGSFTNTMGKVDKHGQCWLQLHEFVYLVERGTVSPYLALT 142
Query: 96 ------DNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIV 136
++ D+ L ++++Y + S + F VY HLK LG+IV
Sbjct: 143 VGDEKSNHEDVLLSVQDVYALFS---STEELDEFLVYAHLKRLGFIV 186
>gi|303290490|ref|XP_003064532.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454130|gb|EEH51437.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 558
Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 43/113 (38%), Gaps = 11/113 (9%)
Query: 43 ISKAHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCL 102
+S A W +AE+V +GK + G +T+ EE LFL E L LL
Sbjct: 161 VSVAMWRPRERVAELVRMRGKHFVKFGYAAGSRTFLHAEEALFLVETERLALLAPGATST 220
Query: 103 PLKEIYEKIANEKSGCSWELFE-----------VYRHLKSLGYIVGRHGVPWI 144
PL + G F V+ HL +GYIV R PW
Sbjct: 221 PLSVHAVRSLAMGGGGGGSRFSIPNPLTPSRYLVFAHLARMGYIVRRFNSPWT 273
>gi|195589768|ref|XP_002084621.1| GD12738 [Drosophila simulans]
gi|194196630|gb|EDX10206.1| GD12738 [Drosophila simulans]
Length = 385
Score = 44.7 bits (104), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Query: 46 AHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLK 105
A W+ E +AEV K GK + G GK Y E +FL E+G L L+ L + ++
Sbjct: 80 AVWHEEQQVAEVKRKDGK-FENFGYSEQGKLYLEYFEAMFLLEVGRLQ-LEYCGLVVSIE 137
Query: 106 EIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVP 142
+ Y + E + + VY L GYIV +H P
Sbjct: 138 QAYVLLLGEMESERYTNYLVYSALSRSGYIVVKHVPP 174
>gi|390368532|ref|XP_003731466.1| PREDICTED: uncharacterized protein LOC100890147 [Strongylocentrotus
purpuratus]
Length = 711
Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 3/97 (3%)
Query: 43 ISKAHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCL 102
+S W + + V KGK W T G + G+ Y EE LFL E+G++ L L
Sbjct: 78 LSVGEWEPDKELVVVKNHKGKFWRTMGYMLQGQKYLYPEEGLFLLEVGSME-LQYGGTPL 136
Query: 103 PLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRH 139
++ Y + + E + VY +L LGYI RH
Sbjct: 137 SVQRAYNLMI--PTYIDKEHYRVYCNLMRLGYITTRH 171
>gi|194869756|ref|XP_001972515.1| GG13845 [Drosophila erecta]
gi|190654298|gb|EDV51541.1| GG13845 [Drosophila erecta]
Length = 555
Score = 44.3 bits (103), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Query: 46 AHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLK 105
A WN E +AEV+ K GK + G GK Y E +FL E+G L L+ + ++
Sbjct: 80 AIWNEEQQVAEVIRKDGK-FENFGYSEQGKLYLEYYEAMFLLEVGRLQ-LEYYGSVVSIE 137
Query: 106 EIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVP 142
+ Y + E + + VY L GYIV +H P
Sbjct: 138 QAYVLLLGELESERYTNYLVYSALCRSGYIVVKHVPP 174
>gi|66472688|ref|NP_001018365.1| tRNA-splicing endonuclease subunit Sen54 [Danio rerio]
gi|63102342|gb|AAH95056.1| Zgc:109927 [Danio rerio]
Length = 397
Score = 43.9 bits (102), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 69 GIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRH 128
G GK Y EE L+L E G + + DL L +++ YE+ + + + ++V+ H
Sbjct: 2 GFSERGKQYLQPEEALYLMECGNVQVF-YRDLPLSIQDGYERFLSSDT-VTLHQYQVFGH 59
Query: 129 LKSLGYIVGR 138
LK LGY+V R
Sbjct: 60 LKRLGYVVNR 69
>gi|254577903|ref|XP_002494938.1| ZYRO0A13332p [Zygosaccharomyces rouxii]
gi|238937827|emb|CAR26005.1| ZYRO0A13332p [Zygosaccharomyces rouxii]
Length = 442
Score = 43.5 bits (101), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 12/105 (11%)
Query: 41 KDISKAHWNNELGMAEVVEKKGKMWTTTG-IVRNGKTYCSIEETLFLAEIGAL---YLLD 96
K++ KA+++ A V+ KG T G + R+G + E ++LAE G++ Y +D
Sbjct: 82 KNLVKAYYDPHEHKALVLRPKGNFLHTLGKMHRDGTVWLEFHEFVYLAERGSITPFYKMD 141
Query: 97 -----NNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIV 136
N +L L ++++Y KS + F V+ HLK LG+IV
Sbjct: 142 GIDWINQELPLTIEDLYMLF---KSQEELDTFFVFEHLKRLGFIV 183
>gi|169608271|ref|XP_001797555.1| hypothetical protein SNOG_07205 [Phaeosphaeria nodorum SN15]
gi|160701607|gb|EAT85856.2| hypothetical protein SNOG_07205 [Phaeosphaeria nodorum SN15]
Length = 416
Score = 43.5 bits (101), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 97/256 (37%), Gaps = 51/256 (19%)
Query: 13 SDNEDSYVDEIDEEDYYMSGFIS--KLQFRKDISKAHWNNELGMAEVVEKKGKMWTTTGI 70
S + + +D+++ M G +S + +K+ A + E MA V + K + + T G
Sbjct: 55 SHSTNQQLDKLEASRQAMHGVLSWQRSHTQKNHVLAMYEPESNMAVVDKVKSQHFQTIGQ 114
Query: 71 VRNGKTYCSIEETLFLAEIGAL---------------YLLDNNDLCLPLKEIYEKIANEK 115
R GK + EE LFL E G L Y +++ + L+ Y +
Sbjct: 115 SRAGKEWLLPEEALFLIERGTLDCRWPVKREDGDETIYKIEDG-APMSLQAAYAAFIGFE 173
Query: 116 SGC----SWELFEVYRHLKSLGYIVGRHGVPW------IVKIPKGR-DINITSDPVSLQ- 163
G + E++ VY LK GY+V R G W IV P D + + P
Sbjct: 174 GGVGGKLTLEMYNVYAGLKRSGYVVFRTGT-WNEHRGDIVPAPAASPDQDTKTQPTIFTR 232
Query: 164 -----------VTPKR-------HGVMDVEPKEESSLVALFY--NIQINEVRPVFDVYLP 203
+ P + ++ + P + SL F N R FDVY
Sbjct: 233 FFTDQYALGPLIKPGLYRSYADIYRLLHLIPSHDRSLPPSFTLPPSSSNPFRLHFDVYRT 292
Query: 204 NRKFKKSCPGDPSFLL 219
KF+KS P F +
Sbjct: 293 TSKFRKSARPPPDFRI 308
>gi|195440941|ref|XP_002068293.1| GK13237 [Drosophila willistoni]
gi|194164378|gb|EDW79279.1| GK13237 [Drosophila willistoni]
Length = 262
Score = 43.1 bits (100), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 8/111 (7%)
Query: 44 SKAHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLP 103
S A ++ + + EV++K GK + G GK Y E LFL E+ L L ++ + L
Sbjct: 77 SLATYHKDQQVVEVLKKDGK-FEHFGYSHKGKFYLEYYEALFLVELNRLQL-EHEGMILS 134
Query: 104 LKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVP------WIVKIP 148
+++ Y + + + + VY L LGYIV RH P WI+ P
Sbjct: 135 MEQNYNFLLGPAACDRYNHYLVYSCLSRLGYIVVRHRKPEAPPILWIIGGP 185
>gi|409042500|gb|EKM51984.1| hypothetical protein PHACADRAFT_212597 [Phanerochaete carnosa
HHB-10118-sp]
Length = 333
Score = 43.1 bits (100), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 26/132 (19%)
Query: 35 SKLQFRKDISKAHWNNELGMAEVVEKKGKMWTTTG--IVRNGKTYCS-----------IE 81
+++ K IS A W+ E+ A + +G +T G + R+ Y E
Sbjct: 85 TRMTSSKSISYAVWHPEIARAHITVARGIHFTNMGHSVARSTDDYGGDMKLTKRLELLPE 144
Query: 82 ETLFLAEIGALYLLDNNDLCLPLKEI-----------YEKIANEKSGCSWELFEVYRHLK 130
E L+L E G+++ ++N L L+++ E I E + E ++VY +LK
Sbjct: 145 EALYLVERGSMFCWNDNVLTSDLEDMEGVPMTVQQAFVEMIGKED--LTLEKYQVYAYLK 202
Query: 131 SLGYIVGRHGVP 142
LGY+V R P
Sbjct: 203 RLGYVVTRTRPP 214
>gi|156847188|ref|XP_001646479.1| hypothetical protein Kpol_1048p52 [Vanderwaltozyma polyspora DSM
70294]
gi|156117156|gb|EDO18621.1| hypothetical protein Kpol_1048p52 [Vanderwaltozyma polyspora DSM
70294]
Length = 472
Score = 42.7 bits (99), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 13/106 (12%)
Query: 41 KDISKAHWNNELGMAEVVEKKGKMWTTTGIV-RNGKTYCSIEETLFLAEIGALY------ 93
K+ KA + + +A + KG T G V + G Y + E L+LAE G +
Sbjct: 96 KNQVKAFYIPDRHVAIIPHPKGNFLQTIGRVDKTGICYLNFLEFLYLAERGTVTPFLCND 155
Query: 94 ---LLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIV 136
+ + N+ L ++EIY KS + F+VY HLK LG+IV
Sbjct: 156 LNDITNGNEYQLSIQEIYSFF---KSQNEMDNFQVYAHLKRLGFIV 198
>gi|328712360|ref|XP_001946058.2| PREDICTED: hypothetical protein LOC100160892 [Acyrthosiphon pisum]
Length = 538
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 43 ISKAHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCL 102
+++A WN++L +A++ + + N Y EE L L E+ L LL N+ L
Sbjct: 49 LAEAEWNDDLKLAKLTKVTKNLTKNFSHSLNKSLYLYPEECLCLLEMKCL-LLKWNERKL 107
Query: 103 PLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRH 139
+K + + SGC++E Y +L LG+ V +H
Sbjct: 108 SIKNAFSLLLAAGSGCTFEQCRTYGYLVKLGFRVFKH 144
>gi|195376369|ref|XP_002046969.1| GJ12192 [Drosophila virilis]
gi|194154127|gb|EDW69311.1| GJ12192 [Drosophila virilis]
Length = 561
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 46 AHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLK 105
A W + EV+ K GK + + G + GK Y E LFL E+ L L+ D+ + ++
Sbjct: 78 AVWRQDQQAVEVLRKDGK-FESFGYSQQGKFYLEYYEALFLLELNRLQ-LEYCDMIVSVE 135
Query: 106 EIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRH 139
+ Y + E + + + VY L GYIV +H
Sbjct: 136 QAYVLLLGEAASDKYNNYLVYSALSRAGYIVVKH 169
>gi|339238555|ref|XP_003380832.1| tRNA-splicing endonuclease subunit Sen54 [Trichinella spiralis]
gi|316976203|gb|EFV59531.1| tRNA-splicing endonuclease subunit Sen54 [Trichinella spiralis]
Length = 360
Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 61 KGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSW 120
KGK+W G GK + EE L+L + A +L+N L + E K +E ++
Sbjct: 90 KGKLWKHMGRTVGGKRHLYPEEALYLLCMCAAIVLENGRP-LSVAEALHKFFDE--SITY 146
Query: 121 ELFEVYRHLKSLGYIVGRH 139
E +Y HL+ GYIV RH
Sbjct: 147 EHCVLYFHLRKSGYIVIRH 165
>gi|19075197|ref|NP_587697.1| tRNA-splicing endonuclease subunit Sen54 (predicted)
[Schizosaccharomyces pombe 972h-]
gi|50401337|sp|O74908.1|SEN54_SCHPO RecName: Full=Probable tRNA-splicing endonuclease subunit sen54;
AltName: Full=tRNA-intron endonuclease sen54
gi|3647337|emb|CAA21061.1| tRNA-splicing endonuclease subunit Sen54 (predicted)
[Schizosaccharomyces pombe]
Length = 384
Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Query: 46 AHWNNELGMAEVVEKKGKMWTTTGIV-RNGKTYCSIEETLFLAEIGALYLLDNNDLCLPL 104
A WN + GM+ V + G ++ T G + + EETL+L E G++ L + L
Sbjct: 86 ATWNAQNGMSCVEKAHGPLFKTMGTADSQNRMWLLPEETLYLVERGSMECWSEEGLPMSL 145
Query: 105 KEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGV 141
+ +Y A+ S E + VY HL+ G+ V R +
Sbjct: 146 QAVYS--ASIPLCGSLENYLVYAHLRRCGFSVIRSNL 180
>gi|398392597|ref|XP_003849758.1| hypothetical protein MYCGRDRAFT_101184 [Zymoseptoria tritici
IPO323]
gi|339469635|gb|EGP84734.1| hypothetical protein MYCGRDRAFT_101184 [Zymoseptoria tritici
IPO323]
Length = 426
Score = 41.2 bits (95), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 21/119 (17%)
Query: 41 KDISKAHWNNELGMAEVVEKKGKMWTTTGIVRNGK--------------TYCSIEETLFL 86
K ++ H++ E GMA + KG ++ G VR+ K + EE L+L
Sbjct: 82 KGMTVGHYHPESGMAWTMNPKGPLFAKMGHVRSAKDDPLGGGVEERGQRMWLLPEEVLYL 141
Query: 87 AEIGAL------YLLDNNDLCLPLKEIYEK-IANEKSGCSWELFEVYRHLKSLGYIVGR 138
E G L + L + L+ Y I + + G + E + VY LK +GY V R
Sbjct: 142 VERGTLDVRWPPAVEGEEGLPMSLQGAYAMFIGDGEGGLTLERYSVYSGLKRMGYTVVR 200
>gi|367009090|ref|XP_003679046.1| hypothetical protein TDEL_0A05030 [Torulaspora delbrueckii]
gi|359746703|emb|CCE89835.1| hypothetical protein TDEL_0A05030 [Torulaspora delbrueckii]
Length = 476
Score = 41.2 bits (95), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 54/98 (55%), Gaps = 9/98 (9%)
Query: 45 KAHWNNELGMAEVVEKKGKMWTTTGIV-RNGKTYCSIEETLFLAEIGAL---YLLDNNDL 100
KA+++++L A + KG T G V + G+ + +E ++LAE G + Y+ + D+
Sbjct: 95 KAYYDSKLHGAILPHPKGNFLQTMGSVDQEGRCWLDFQEFVYLAERGTVLPFYINEPRDI 154
Query: 101 CLPL--KEIYEKIANEKSGCSWELFEVYRHLKSLGYIV 136
+PL +++Y +S + + ++ HLK LG+I+
Sbjct: 155 EIPLSMQDLYSLF---RSQAEMDRYFIFAHLKRLGFII 189
>gi|343426140|emb|CBQ69671.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 725
Score = 41.2 bits (95), Expect = 0.31, Method: Composition-based stats.
Identities = 35/137 (25%), Positives = 62/137 (45%), Gaps = 31/137 (22%)
Query: 41 KDISKAHWNNELGMAEVVEKKGKMWTTTGIVR--------NGKTYCSI------EETLFL 86
+ + +A W+ A +++ +GK++ T G++R GK EE LFL
Sbjct: 135 RSLVRATWDASTARARLLDVQGKIFETVGVIRREQVHDTKTGKMVTKAWNELLPEEALFL 194
Query: 87 AEIGALYLLDN--------NDLC-LPLKEIYEKIANEKSGCS--------WELFEVYRHL 129
AE G+L + D DL + L++ + ++ S S E + +Y +L
Sbjct: 195 AERGSLQIYDQCSDDASTEQDLAPMSLQQAFAELMKPPSPDSPVQDEPLTREAYLIYAYL 254
Query: 130 KSLGYIVGRHGVPWIVK 146
K LGY+V R + +V+
Sbjct: 255 KRLGYVVQRASLVDVVR 271
>gi|195327081|ref|XP_002030250.1| GM24671 [Drosophila sechellia]
gi|194119193|gb|EDW41236.1| GM24671 [Drosophila sechellia]
Length = 507
Score = 41.2 bits (95), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 62/136 (45%), Gaps = 6/136 (4%)
Query: 11 KASDNEDSY--VDEIDEEDYYMSGFIS--KLQFRKDISKAHWNNELGMAEVVEKKGKMWT 66
K + NE + V+E+ Y+ +S +++ + A W+ E +AEV K GK +
Sbjct: 41 KRTKNEGTAAEVEELKRAQEYLRAQLSVPRIERLGGRALAVWHEEQQVAEVKRKDGK-FE 99
Query: 67 TTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVY 126
G G Y E +FL E+G L L+ L + +++ Y + + + + VY
Sbjct: 100 NFGYSEQGVLYLEYYEAMFLLEVGRLQ-LEYCGLVVSIEQAYVLLLGKLESERYTNYLVY 158
Query: 127 RHLKSLGYIVGRHGVP 142
L GYIV +H P
Sbjct: 159 SALSRSGYIVVKHAPP 174
>gi|219117099|ref|XP_002179344.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409235|gb|EEC49167.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 340
Score = 40.8 bits (94), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 76/189 (40%), Gaps = 30/189 (15%)
Query: 43 ISKAHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGAL--YLLDNNDL 100
ISKA N+++ +A+ Y IEE LFL E G L Y L+N DL
Sbjct: 97 ISKAIANDQIDLAQSSNTSAT-----------SDYLFIEEVLFLFERGLLEAYELENQDL 145
Query: 101 CLPLK-----EIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINI 155
+K +Y+ + E G + + VY HL++ + RH + +D
Sbjct: 146 DRSVKPLDPFALYQML--EPLGVTLPTYLVYAHLRAQTFRTVRHSSVRRSILDAMQD--- 200
Query: 156 TSDPVSLQVTPKR----HGVMDVEPK-EESSLVALFYNIQINEVRP--VFDVYLPNRKFK 208
P V KR + D+ + E SL A Y I I FDVY P +
Sbjct: 201 ALPPNQTAVERKRALQSEAMKDLRQQLREESLRAQSYRIPIASQGHGVAFDVYRPESDYT 260
Query: 209 KSCPGDPSF 217
+S PG P +
Sbjct: 261 RSRPGLPDY 269
>gi|388857167|emb|CCF49180.1| uncharacterized protein [Ustilago hordei]
Length = 681
Score = 40.4 bits (93), Expect = 0.53, Method: Composition-based stats.
Identities = 49/178 (27%), Positives = 80/178 (44%), Gaps = 43/178 (24%)
Query: 41 KDISKAHWNNELGMAEVVEKKGKMWTTTGIVRN-------GKTYCSI------EETLFLA 87
+ + +A W EL A +++ +GK++ T G++R GK EE LFLA
Sbjct: 136 RSLVRAVWKPELRRARLLDVQGKIFETVGVIRRERLPGDAGKMVSKASNELLPEEALFLA 195
Query: 88 EIGA--LYLLDNND-----LCLPLKEIYEKI---ANEKSG----CSWELFEVYRHLKSLG 133
E + LY ++ + + + L++ + + E G + E + VY +LK LG
Sbjct: 196 ERASLQLYTVEEQEREAQLVPMSLQQAFASLMLPPTEGEGLDEPLTREAYLVYAYLKRLG 255
Query: 134 YIVGRHGVPWIVKIPKGRDINITSDPVSLQVTP-KRH----GVMDVEPKEESSLVALF 186
Y+V R V V+ S PVS V KRH GV+ +P+ LV ++
Sbjct: 256 YVVQRAKVVDAVR----------SAPVSASVMARKRHVKSQGVV-ADPERPLKLVTIW 302
>gi|328875411|gb|EGG23775.1| hypothetical protein DFA_05911 [Dictyostelium fasciculatum]
Length = 488
Score = 40.0 bits (92), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
Query: 40 RKDISKAHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNND 99
R ++S A W+ + +V++ KGK + + G G + +EE ++L EIG + L+
Sbjct: 44 RGNLSIAEWDESKKLFKVLKPKGKQFESLGHSIKGVLHLYVEEAIYLLEIGVVELIFKG- 102
Query: 100 LCLPLKEIYEKIANE--KSGCSWELFEVYRHLKSLGYIVGRH 139
L L L++ Y+ ++ G + ++ + + + LG+ + R+
Sbjct: 103 LPLCLQDAYKLFDDQFYSGGFPFYKYQTFLYFRKLGFHLVRY 144
>gi|194912181|ref|XP_001982450.1| GG12821 [Drosophila erecta]
gi|190648126|gb|EDV45419.1| GG12821 [Drosophila erecta]
Length = 426
Score = 39.7 bits (91), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 46/103 (44%), Gaps = 13/103 (12%)
Query: 43 ISKAHWNNELGMAEVVEKKGKMWTTTGIVRNGK--------TYCSIEETLFLAEIGALYL 94
+++ NEL + +VE+K +M +R+G+ +C ++ ++L E
Sbjct: 197 VAQDQEGNELVLPYIVERK-RMDDLASSIRDGRFHEQKHRLQHCGLQHIIYLVEDYG--- 252
Query: 95 LDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVG 137
DN L LPL + + + N K + H +S+ Y+ G
Sbjct: 253 -DNEQLGLPLDSLQQALTNAKVQAGVRVVRTANHFRSMSYLAG 294
>gi|449017199|dbj|BAM80601.1| probable tRNA splicing endonuclease subunit Sen54 [Cyanidioschyzon
merolae strain 10D]
Length = 348
Score = 39.7 bits (91), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 71/182 (39%), Gaps = 46/182 (25%)
Query: 41 KDISKAHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNN-- 98
K ++ W+ MA V + +GK++ + GIVR + + EE +FL + + LL +
Sbjct: 68 KHLAVLEWSPAHHMALVRQPRGKIFQSLGIVRGPEHWLYPEEAVFLVDRSSADLLVDGIA 127
Query: 99 ---DLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINI 155
+ C L +YE+I E + Y +L+ LGY V R + R I
Sbjct: 128 TSVERCFALL-LYERIPLEH-------YYAYAYLRRLGYHVRR-------SLSDTRAAAI 172
Query: 156 TSDPVSLQVTPKRHGVMDVEPKEESSLVALFYNIQINEVRPVFDVYLPNRKFKKSCPGDP 215
P + Q + V +DV+ P FK+S PG P
Sbjct: 173 VGAPFA-------------------------SAFQGDRVPFHYDVWPPG-NFKRSMPGVP 206
Query: 216 SF 217
F
Sbjct: 207 LF 208
>gi|424513192|emb|CCO66776.1| predicted protein [Bathycoccus prasinos]
Length = 462
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 59/139 (42%), Gaps = 39/139 (28%)
Query: 42 DISKAHWNNELGMAEVVEKKGKMWTTTG---IVRNGKTYCSIEET--------------- 83
+I+ A W+ +L +A+VV++KGK + G NG T +
Sbjct: 102 NIAVAIWDEKLKLAKVVKQKGKSLSKFGYSAAAANGATKETGANAATVTTTTIASSADNG 161
Query: 84 -----LFLAEIGALYLLDNNDLCL------------PLKEIYEKIANEKSGCSWELFEVY 126
LF E+ +L++ +CL +K I+E + E+ G S E + Y
Sbjct: 162 GGAVYLFPEEVA--FLVETERVCLFWQARGKGLEPASVKSIHEML--EECGVSMETYVTY 217
Query: 127 RHLKSLGYIVGRHGVPWIV 145
L +GY+ R G PW+V
Sbjct: 218 AQLCRIGYVARRFGAPWVV 236
>gi|255715519|ref|XP_002554041.1| KLTH0E12980p [Lachancea thermotolerans]
gi|238935423|emb|CAR23604.1| KLTH0E12980p [Lachancea thermotolerans CBS 6340]
Length = 443
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 6/102 (5%)
Query: 41 KDISKAHWNNELGMAEVVEKKGKMWTTTGIV-RNGKTYCSIEETLFLAEIGALYLL---- 95
K++ KA++ +L A V KG T G V R+G + S E ++LAE G +
Sbjct: 86 KNLIKAYYVPDLHKACVPHPKGSFMHTMGKVDRDGACWLSFFEFVYLAERGTIAPYYKRK 145
Query: 96 DNNDLCL-PLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIV 136
++ D L P I + KS + F VY HLK LG+IV
Sbjct: 146 ESEDHALDPFLGIQDLYMLFKSQKESDEFAVYAHLKRLGFIV 187
>gi|366989799|ref|XP_003674667.1| hypothetical protein NCAS_0B02090 [Naumovozyma castellii CBS 4309]
gi|342300531|emb|CCC68293.1| hypothetical protein NCAS_0B02090 [Naumovozyma castellii CBS 4309]
Length = 470
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 45 KAHWNNELGMAEVVEKKGKMWTTTG-IVRNGKTYCSIEETLFLAEIGALY-LLDNNDLCL 102
KA++ E +A + + +G T G +G + E ++LAE G + + +L +
Sbjct: 89 KAYYIPETHLAYIPQPRGNFMNTMGRATSSGDFFLQFHEFVYLAERGTVTPFIKTEELDI 148
Query: 103 PLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIV 136
PL I + K + F +Y HLK LG+IV
Sbjct: 149 PL-SIQDLYVLFKDQNELDTFAIYAHLKRLGFIV 181
>gi|195564525|ref|XP_002105867.1| GD16537 [Drosophila simulans]
gi|194203230|gb|EDX16806.1| GD16537 [Drosophila simulans]
Length = 426
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 57/136 (41%), Gaps = 16/136 (11%)
Query: 10 EKASDNEDSYVDEIDEEDYYMSGFISKLQFRKDISKAHWNNELGMAEVVEKKGKMWTTTG 69
+K D SY+D ++ I + +++ NEL + +VE+K +M
Sbjct: 167 KKVLDQTRSYLDSLEARHEVRRLTIGDFLW---VAQDQEGNELVLPYIVERK-RMDDLAS 222
Query: 70 IVRNGK--------TYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWE 121
+R+G+ +C ++ ++L E DN L LPL + + + N K
Sbjct: 223 SIRDGRFHEQKHRLQHCGLQHIIYLVEDYG----DNEQLGLPLDSLQQALTNAKVQTGVR 278
Query: 122 LFEVYRHLKSLGYIVG 137
+ H +S+ Y+ G
Sbjct: 279 VVRTANHYRSMSYLAG 294
>gi|156717656|ref|NP_001096368.1| tRNA splicing endonuclease 54 homolog [Xenopus (Silurana)
tropicalis]
gi|134024004|gb|AAI35898.1| LOC100124961 protein [Xenopus (Silurana) tropicalis]
Length = 229
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 30/65 (46%)
Query: 43 ISKAHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCL 102
+ K W + + E+ GK W T G GK EE ++L E GA+ L ++ L
Sbjct: 61 LVKGIWRPKEDLVELTSPAGKFWQTMGFTHQGKQCLLPEEAVYLLECGAVQLFYHDSLLS 120
Query: 103 PLKEI 107
L +I
Sbjct: 121 VLDQI 125
>gi|195347504|ref|XP_002040292.1| GM19103 [Drosophila sechellia]
gi|194121720|gb|EDW43763.1| GM19103 [Drosophila sechellia]
Length = 426
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 57/136 (41%), Gaps = 16/136 (11%)
Query: 10 EKASDNEDSYVDEIDEEDYYMSGFISKLQFRKDISKAHWNNELGMAEVVEKKGKMWTTTG 69
+K D SY+D ++ I + +++ NEL + +VE+K +M
Sbjct: 167 KKVLDQTRSYLDSLEARHEVRRLTIGDFLW---VAQDQEGNELVLPYIVERK-RMDDLAS 222
Query: 70 IVRNGK--------TYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWE 121
+R+G+ +C ++ ++L E DN L LPL + + + N K
Sbjct: 223 SIRDGRFHEQKHRLQHCGLQHIIYLVEDYG----DNEQLGLPLDSLQQALTNAKVQTGVR 278
Query: 122 LFEVYRHLKSLGYIVG 137
+ H +S+ Y+ G
Sbjct: 279 VVRTANHYRSMSYLAG 294
>gi|315427179|dbj|BAJ48793.1| tRNA-modifying enzyme [Candidatus Caldiarchaeum subterraneum]
gi|343485795|dbj|BAJ51449.1| tRNA-modifying enzyme [Candidatus Caldiarchaeum subterraneum]
Length = 337
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 72/163 (44%), Gaps = 31/163 (19%)
Query: 23 IDEEDYYMSGF-----ISKLQFRKDISKAHWNNELG--------MAEVVEKKGKMWTTTG 69
I E+ +SGF +SK +FR+ + H L +AE ++ TT
Sbjct: 113 IAEQRQLLSGFGGNPNVSKERFREAMEPMHIAISLDGEPTLYPYLAEFIQLASSRGMTTF 172
Query: 70 IVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHL 129
+V NG +EE L A+ +LY+ L P KE + K SWE R L
Sbjct: 173 LVTNGTMPERLEELLQKAQPTSLYI----SLYGPDKETHVKTCKPLIKDSWE-----RLL 223
Query: 130 KSLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQVTPKRHGVM 172
KSL ++GR I+++ +D+N+ S P+++G +
Sbjct: 224 KSL-ELMGRFSCRKIIRLTLVKDVNMHS--------PEKYGAL 257
>gi|19114394|ref|NP_593482.1| exonuclease II Exo2 [Schizosaccharomyces pombe 972h-]
gi|729456|sp|P40383.1|XRN1_SCHPO RecName: Full=5'-3' exoribonuclease 1; AltName: Full=Exonuclease 2;
AltName: Full=Exonuclease II; Short=Exo II; AltName:
Full=p140
gi|531022|gb|AAB42181.1| deoxyribonuclease [Schizosaccharomyces pombe]
gi|2370486|emb|CAB11514.1| exonuclease II Exo2 [Schizosaccharomyces pombe]
Length = 1328
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 39/91 (42%), Gaps = 7/91 (7%)
Query: 117 GCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQVTPKR--HGVMDV 174
G W LF YR +S G+ H P I + KG D+ I TP R +M V
Sbjct: 525 GLQWVLFYYYRGCQSWGWYYNYHFAPKISDVLKGLDVKIDFK----MGTPFRPFEQLMAV 580
Query: 175 EPKEESSLV-ALFYNIQINEVRPVFDVYLPN 204
P +LV F ++ +N P+ D Y N
Sbjct: 581 LPARSQALVPPCFRDLMVNSESPIIDFYPEN 611
>gi|254569668|ref|XP_002491944.1| Subunit of the tRNA splicing endonuclease, which is composed of
Sen2p, Sen15p, Sen34p, and Sen54p [Komagataella pastoris
GS115]
gi|238031741|emb|CAY69664.1| Subunit of the tRNA splicing endonuclease, which is composed of
Sen2p, Sen15p, Sen34p, and Sen54p [Komagataella pastoris
GS115]
Length = 371
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 75/178 (42%), Gaps = 27/178 (15%)
Query: 56 EVVEKKGKMWTTTGIVR-NGKTYCSIEETLFLAEIGALYLL--DNNDLCLPLKEIYEKIA 112
++ +GK + G N KT+ + E L+L E G + ++N+ L L+E Y I
Sbjct: 87 HILNAQGKFLDSMGKTDGNHKTWFTKFEALYLIERGTCRITYDEDNNYTLSLEECYTVIL 146
Query: 113 NEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQVTPKRHGVM 172
+ + + VY HLK GYIV + I K + R +NI + S+ P
Sbjct: 147 TDDEDI--DKYNVYSHLKRNGYIVLEYASLSIEK--ETRYVNIDKNIHSVYDKPLFKYTF 202
Query: 173 DVEPKEESSLVALFYNIQIN-----EVRPV--------FDVYLPNRKFKKSCPGDPSF 217
++ +F N+Q++ +V P F V+ P F+K P P F
Sbjct: 203 -------TNYSTIFCNLQLDIYNRHKVSPAPTSPFEICFSVWKPQVNFQKKSPPLPDF 253
>gi|384491032|gb|EIE82228.1| hypothetical protein RO3G_06933 [Rhizopus delemar RA 99-880]
Length = 298
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 56 EVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEK 115
++ KG T G+ G + EE FL AL + D D L +++ E I E
Sbjct: 71 KITVNKGTHLHTVGMSHQGHIRLNPEEAAFLVSRNALIVRDE-DRVLTFEDLCEFIV-ED 128
Query: 116 SGCSWELFEVYRHLKSLGYIVGR 138
+ +++ + VY +LK LGYIV R
Sbjct: 129 TWLTFDKYLVYAYLKRLGYIVMR 151
>gi|312375463|gb|EFR22833.1| hypothetical protein AND_14135 [Anopheles darlingi]
Length = 326
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 55/118 (46%), Gaps = 4/118 (3%)
Query: 43 ISKAHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCL 102
IS+ W N+ ++ +GK W G + Y E LFL E+ L++ N + +
Sbjct: 66 ISEGVWENDNRRVRIIRAEGK-WQAFGYEDSSGKYVDSYEALFLMEMNRLFV-KWNGVVV 123
Query: 103 PLKEIYEKI--ANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSD 158
+++ Y + ++ S + E ++VY L +GY V R+ + P+ D+ T +
Sbjct: 124 SIEQGYSLLLGSHHSSYLTLEEYQVYSLLNRVGYFVLRYDPDRVTYQPEEMDMLSTEE 181
>gi|449665715|ref|XP_004206205.1| PREDICTED: uncharacterized protein LOC101240787 [Hydra
magnipapillata]
Length = 260
Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Query: 42 DISKAHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLC 101
+++ A W+ +A V KG + G + EETLFL + G L L +NN +
Sbjct: 2 NLTVASWDKSRNVAIVETIKGNSFRKQGWQTKEGILFNAEETLFLVDQGVLELKENN-IP 60
Query: 102 LPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRH 139
L ++ I S E ++ Y +L LGYIV R+
Sbjct: 61 LSFHAVFMLILPILP--SLEYYQTYAYLCRLGYIVRRY 96
>gi|315428146|dbj|BAJ49731.1| tRNA-modifying enzyme, partial [Candidatus Caldiarchaeum
subterraneum]
Length = 285
Score = 37.7 bits (86), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 66/148 (44%), Gaps = 23/148 (15%)
Query: 23 IDEEDYYMSGF-----ISKLQFRKDISKAHWNNELG--------MAEVVEKKGKMWTTTG 69
I E+ +SGF +SK +FR+ + H L +AE ++ TT
Sbjct: 113 IAEQRQLLSGFGGNPNVSKERFREAMEPMHIAISLDGEPTLYPYLAEFIQLASSRGMTTF 172
Query: 70 IVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHL 129
+V NG +EE L A+ +LY+ L P KE + K SWE R L
Sbjct: 173 LVTNGTMPERLEELLQKAQPTSLYI----SLYGPDKETHVKTCKPLIKDSWE-----RLL 223
Query: 130 KSLGYIVGRHGVPWIVKIPKGRDINITS 157
KSL ++GR I+++ +D+N+ S
Sbjct: 224 KSL-ELMGRFSCRKIIRLTLVKDVNMHS 250
>gi|407002985|gb|EKE19623.1| hypothetical protein ACD_8C00133G0022 [uncultured bacterium]
Length = 434
Score = 37.7 bits (86), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 91/215 (42%), Gaps = 33/215 (15%)
Query: 1 MEENDCDSWEKASDNEDSYVDEIDEEDYYMSGFISKLQFRKDISKAHWNNELGMAEVVEK 60
+ E D+ E+A DN +Y D D DYY S Q + ++ A N L A+ K
Sbjct: 140 LNEQTVDAAEQAVDNAQAYYD--DTLDYYNSA--PSKQLKPSLTAAE--NALKSAQEALK 193
Query: 61 KGKMWT------TTGIVRNGKTYCSIEETLFL-----AEIG--------ALYLLDNNDLC 101
K T V + K E+ F A++ AL LD L
Sbjct: 194 TSKQQTELSEISAKSAVDSAKARVKTVESEFAKNSRNAQVASAQASYDMALINLDKATLI 253
Query: 102 LPLKEIYEKIANEKSG---CSWELFEVYRHLKSLGYIVGRHGVPW--IVKIPKGRDINIT 156
P+ I ++ N K G + + E + + SL +I+ + VP IVKI G+ IT
Sbjct: 254 SPVNGIITEV-NNKPGEILGTGVIKETFSRVMSLDFII-QSKVPESDIVKIKLGQHAKIT 311
Query: 157 SDPVSLQVTPKRHGVMDVEPKEESSLVALFYNIQI 191
D ++L+ +++++P + ++YNI++
Sbjct: 312 FDALTLEDIFDAE-IIEIDPASTNVQGVVYYNIKL 345
>gi|451998793|gb|EMD91256.1| hypothetical protein COCHEDRAFT_1224458 [Cochliobolus
heterostrophus C5]
Length = 447
Score = 37.4 bits (85), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 70/172 (40%), Gaps = 39/172 (22%)
Query: 20 VDEIDEEDYYMSGFIS--KLQFRKDISKAHWNNELGMAEVVEKKGKMWTTTGIVRNGKTY 77
+D ++ M G +S + +K A ++ E MA V + K + + T G + GK +
Sbjct: 61 LDTLEASRRAMHGVLSWQRTHTQKGHVLAMYDPECNMACVDKVKSQHFQTIGTNKGGKEW 120
Query: 78 CSIEETLFLAEIGALYLLDNNDLCLPLK-EIYEK-IANEKSGC----------------- 118
EE LFL E G L D P+K EI +K + + G
Sbjct: 121 LLPEEALFLLERGTL------DCRWPVKREIGDKTVYRTEDGAPMSLQSAYAAFIGFEGG 174
Query: 119 -----SWELFEVYRHLKSLGYIVGRHGVPW------IVKIPKGRDINITSDP 159
+ E++ VY LK GY++ R G W IV+ P + TS P
Sbjct: 175 IGGKLTLEMYNVYAGLKRSGYVIFRTGS-WDHDRGEIVEAPPKSEQETTSSP 225
>gi|393768126|ref|ZP_10356668.1| coenzyme A transferase [Methylobacterium sp. GXF4]
gi|392726519|gb|EIZ83842.1| coenzyme A transferase [Methylobacterium sp. GXF4]
Length = 670
Score = 37.4 bits (85), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 78/194 (40%), Gaps = 35/194 (18%)
Query: 31 SGFISKLQFRKDISKAHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIG 90
GFI+ Q K + A G+ VVE G T G R+ K ++E+ F
Sbjct: 393 GGFINISQNAKSLVFAGTFTADGLEVVVEGDGIRIVTEG--RSRKFIAAVEQVTFSGAYA 450
Query: 91 ALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKG 150
A + P+ + E+ ++ EL EV + I+G+ G IV+ PK
Sbjct: 451 A-------ERGQPVLYVTERCVFRRTKAGMELAEVAPGIDIERDILGQMGFVPIVQDPKP 503
Query: 151 RDINITSDPVSLQVTPKRHGVMDVEP-------------KEESSLVALFYNIQINEVRPV 197
D + D VM +EP E ++ LF N++ +VR +
Sbjct: 504 MDPRLFRD-----------AVMGLEPWLLGLSLSERITYDRERNI--LFSNLEGFQVRTI 550
Query: 198 FDVYLPNRKFKKSC 211
DV L R+++++C
Sbjct: 551 DDVELVRREYERAC 564
>gi|196000656|ref|XP_002110196.1| hypothetical protein TRIADDRAFT_53950 [Trichoplax adhaerens]
gi|190588320|gb|EDV28362.1| hypothetical protein TRIADDRAFT_53950 [Trichoplax adhaerens]
Length = 274
Score = 37.4 bits (85), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 84/193 (43%), Gaps = 56/193 (29%)
Query: 43 ISKAHWNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCL 102
+S+ WN++ +AE+ KKG + LY L L
Sbjct: 67 LSRGEWNDQTLVAEIHYKKGAL--------------------------ELYY---KGLPL 97
Query: 103 PLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGR------DINIT 156
L+E Y I + K+ ++ ++VY HL LG+IV RH +P K+ K D ++T
Sbjct: 98 SLQEAYSIILS-KTFPIYK-YQVYCHLLRLGFIVKRH-LPARFKVNKETKSKLQPDHDVT 154
Query: 157 SD-PVSLQVTPKRHGVMDVEPKEES-SLVALFYNIQINEVRPV----------FDVYLPN 204
D P+ L VTP MD E ++ + + + + ++ EV FDVYLPN
Sbjct: 155 EDYPIPL-VTP-----MDAETTDKILNKLQVVKSTKMEEVTTKSGSKMEDTIDFDVYLPN 208
Query: 205 RKFKKSCPGDPSF 217
FKK G P+
Sbjct: 209 ANFKKVNFGLPNI 221
>gi|354545444|emb|CCE42172.1| hypothetical protein CPAR2_807210 [Candida parapsilosis]
Length = 425
Score = 37.0 bits (84), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 82/212 (38%), Gaps = 49/212 (23%)
Query: 48 WNNELGMAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGAL--YL--------LDN 97
W +L V+ +G + G+ R Y + ET++L E G+L YL LDN
Sbjct: 93 WVPKLNQCVVLHIRGNFFRDMGVARGSIMYLNQYETVYLVERGSLIAYLSSEEFEDWLDN 152
Query: 98 NDLCLPLKEIYEKIANEKSGCSWEL-----------FEVYRHLKSLGYIVGRHGVPWIVK 146
EI I ++ E ++VY +LK LGYI+ +
Sbjct: 153 GS------EIEFDIGSKLWALDLEYLYCLVKVDIPQYQVYSYLKRLGYILQAPKLQ--ST 204
Query: 147 IPKGRDINITSDPVSLQVTPKRHGVMDVEPKEESSL--------VALFYNIQINE----- 193
I KG+ N T + VS + P++ G++ S ++ I +N
Sbjct: 205 IDKGKVYNSTLN-VSFWLLPRKWGILAYPALHTSHFKTKTYFNYTNIYKAITLNTEEIVT 263
Query: 194 ---VRPV---FDVYLPNRKFKKSCPGDPSFLL 219
+P+ ++V+ P F K P P F L
Sbjct: 264 DPPTKPLHITYNVWRPTPSFAKKSPPHPDFQL 295
>gi|328351560|emb|CCA37959.1| Probable tRNA-splicing endonuclease subunit sen54 [Komagataella
pastoris CBS 7435]
Length = 727
Score = 37.0 bits (84), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 75/178 (42%), Gaps = 27/178 (15%)
Query: 56 EVVEKKGKMWTTTGIVR-NGKTYCSIEETLFLAEIGALYLL--DNNDLCLPLKEIYEKIA 112
++ +GK + G N KT+ + E L+L E G + ++N+ L L+E Y I
Sbjct: 87 HILNAQGKFLDSMGKTDGNHKTWFTKFEALYLIERGTCRITYDEDNNYTLSLEECYTVIL 146
Query: 113 NEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQVTPKRHGVM 172
+ + + VY HLK GYIV + I K + R +NI + S+ P
Sbjct: 147 TDDEDI--DKYNVYSHLKRNGYIVLEYASLSIEK--ETRYVNIDKNIHSVYDKPLFKYTF 202
Query: 173 DVEPKEESSLVALFYNIQIN-----EVRPV--------FDVYLPNRKFKKSCPGDPSF 217
++ +F N+Q++ +V P F V+ P F+K P P F
Sbjct: 203 -------TNYSTIFCNLQLDIYNRHKVSPAPTSPFEICFSVWKPQVNFQKKSPPLPDF 253
>gi|343796730|gb|AEM63745.1| tRNA splicing endonuclease [uncultured euryarchaeote]
Length = 390
Score = 37.0 bits (84), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 69/144 (47%), Gaps = 19/144 (13%)
Query: 82 ETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVG---R 138
ETLFL E G+L + P EI KIA++ + +L+EVY+ +S GY++ +
Sbjct: 178 ETLFLVEFGSLKIE-----GYPFNEIL-KIASKVRPDAQKLYEVYKDWRSKGYVIKSGFK 231
Query: 139 HGVPWIVKIPKGRDINITSDPVSLQVTPKRHGVMDVEPKEESSLVALFYNI--QINEVRP 196
G + V P + I DP + +H V+ V P++ L + + + + V+
Sbjct: 232 FGTHFRVYFPGAKPIK--DDPSWIH---SKH-VLHVFPRDSKLLTSEWARVIRVAHSVKK 285
Query: 197 VFDVYLPNRKFKKSCPGDPSFLLY 220
F + +P + +K D F+LY
Sbjct: 286 TFILGIPGKTRQKKVNMD--FILY 307
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.137 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,861,679,733
Number of Sequences: 23463169
Number of extensions: 163328180
Number of successful extensions: 378925
Number of sequences better than 100.0: 175
Number of HSP's better than 100.0 without gapping: 93
Number of HSP's successfully gapped in prelim test: 82
Number of HSP's that attempted gapping in prelim test: 378642
Number of HSP's gapped (non-prelim): 233
length of query: 226
length of database: 8,064,228,071
effective HSP length: 137
effective length of query: 89
effective length of database: 9,144,741,214
effective search space: 813881968046
effective search space used: 813881968046
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 74 (33.1 bits)