Query 027230
Match_columns 226
No_of_seqs 216 out of 1054
Neff 9.0
Searched_HMMs 46136
Date Fri Mar 29 06:52:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027230.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/027230hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd07214 Pat17_isozyme_like Pat 100.0 4.3E-49 9.3E-54 336.4 18.2 210 9-225 1-210 (349)
2 cd07215 Pat17_PNPLA8_PNPLA9_li 100.0 2.3E-45 4.9E-50 312.2 16.3 199 13-225 1-200 (329)
3 cd07211 Pat_PNPLA8 Patatin-lik 100.0 2.3E-43 4.9E-48 297.7 16.6 190 5-225 1-203 (308)
4 cd07217 Pat17_PNPLA8_PNPLA9_li 100.0 3.6E-42 7.8E-47 292.3 15.9 195 12-225 1-203 (344)
5 cd07216 Pat17_PNPLA8_PNPLA9_li 100.0 6.4E-42 1.4E-46 288.9 14.8 190 12-225 1-204 (309)
6 cd07212 Pat_PNPLA9 Patatin-lik 100.0 4.9E-40 1.1E-44 276.6 13.2 163 14-225 1-181 (312)
7 cd07213 Pat17_PNPLA8_PNPLA9_li 100.0 1.8E-39 4E-44 271.3 15.3 171 11-225 1-180 (288)
8 cd07207 Pat_ExoU_VipD_like Exo 100.0 1E-37 2.2E-42 246.8 15.8 171 15-225 2-185 (194)
9 cd07205 Pat_PNPLA6_PNPLA7_NTE1 100.0 2.5E-37 5.4E-42 240.9 15.8 158 14-224 2-159 (175)
10 cd07228 Pat_NTE_like_bacteria 100.0 3.3E-36 7.2E-41 234.5 14.6 157 14-224 2-159 (175)
11 KOG4231 Intracellular membrane 100.0 6.9E-37 1.5E-41 260.7 9.1 188 5-224 410-612 (763)
12 cd07210 Pat_hypo_W_succinogene 100.0 1.4E-35 3E-40 238.6 14.8 158 14-224 2-159 (221)
13 cd07199 Pat17_PNPLA8_PNPLA9_li 100.0 1.1E-35 2.4E-40 245.1 11.8 146 14-225 1-147 (258)
14 COG3621 Patatin [General funct 100.0 4E-35 8.7E-40 238.6 14.6 196 11-225 8-206 (394)
15 cd07225 Pat_PNPLA6_PNPLA7 Pata 100.0 1.1E-34 2.4E-39 243.3 13.6 166 12-224 15-180 (306)
16 cd07227 Pat_Fungal_NTE1 Fungal 100.0 2.7E-33 5.8E-38 230.3 13.6 164 12-224 10-173 (269)
17 PRK10279 hypothetical protein; 100.0 1E-32 2.2E-37 230.3 15.3 160 12-224 5-164 (300)
18 cd07209 Pat_hypo_Ecoli_Z1214_l 100.0 1.5E-32 3.2E-37 220.5 12.9 147 15-225 1-150 (215)
19 cd07198 Patatin Patatin-like p 100.0 1.3E-31 2.8E-36 208.1 13.4 157 15-225 1-162 (172)
20 cd07208 Pat_hypo_Ecoli_yjju_li 100.0 7.2E-32 1.6E-36 223.4 10.3 161 15-224 1-165 (266)
21 cd07218 Pat_iPLA2 Calcium-inde 100.0 2.3E-30 4.9E-35 210.8 14.8 163 15-226 3-168 (245)
22 COG1752 RssA Predicted esteras 100.0 4.5E-30 9.8E-35 216.5 15.3 169 11-224 10-182 (306)
23 cd07222 Pat_PNPLA4 Patatin-lik 100.0 4.9E-30 1.1E-34 209.5 13.3 166 15-225 2-169 (246)
24 cd07204 Pat_PNPLA_like Patatin 100.0 1.4E-29 3.1E-34 206.4 14.9 164 15-225 2-168 (243)
25 cd07221 Pat_PNPLA3 Patatin-lik 100.0 2.1E-29 4.5E-34 205.9 15.6 166 14-226 2-170 (252)
26 cd07230 Pat_TGL4-5_like Triacy 100.0 2.8E-29 6E-34 218.4 15.7 185 11-224 72-269 (421)
27 cd07232 Pat_PLPL Patain-like p 100.0 6.7E-29 1.5E-33 215.2 15.9 183 11-224 66-258 (407)
28 cd07219 Pat_PNPLA1 Patatin-lik 100.0 1.1E-28 2.4E-33 208.5 13.6 167 11-224 11-180 (382)
29 cd07220 Pat_PNPLA2 Patatin-lik 100.0 1.5E-27 3.3E-32 194.3 15.4 166 13-225 5-173 (249)
30 cd07224 Pat_like Patatin-like 99.9 3.2E-27 7E-32 191.6 13.3 157 15-225 2-164 (233)
31 PF01734 Patatin: Patatin-like 99.9 8.9E-27 1.9E-31 182.6 9.7 182 15-225 1-201 (204)
32 cd07223 Pat_PNPLA5-mammals Pat 99.9 1.7E-25 3.6E-30 188.5 13.6 167 11-224 8-177 (405)
33 cd07229 Pat_TGL3_like Triacylg 99.9 4.6E-24 9.9E-29 182.4 16.0 183 11-223 82-293 (391)
34 cd07231 Pat_SDP1-like Sugar-De 99.9 3.5E-24 7.6E-29 177.4 13.3 144 11-224 67-225 (323)
35 cd07206 Pat_TGL3-4-5_SDP1 Tria 99.9 2.8E-24 6E-29 177.7 10.8 142 11-224 68-213 (298)
36 TIGR03607 patatin-related prot 99.9 8.3E-23 1.8E-27 186.3 14.7 200 13-224 4-287 (739)
37 cd01819 Patatin_and_cPLA2 Pata 99.9 8.7E-23 1.9E-27 155.8 10.9 138 15-225 1-140 (155)
38 COG4667 Predicted esterase of 99.9 8.2E-23 1.8E-27 163.0 10.8 167 9-224 8-177 (292)
39 KOG2968 Predicted esterase of 99.9 5.7E-23 1.2E-27 185.1 10.2 165 12-224 839-1004(1158)
40 KOG0513 Ca2+-independent phosp 99.7 8.4E-18 1.8E-22 148.1 8.2 218 4-225 27-266 (503)
41 KOG2214 Predicted esterase of 99.7 3.5E-17 7.7E-22 140.9 9.1 182 11-224 173-369 (543)
42 KOG3773 Adiponutrin and relate 99.4 1.9E-13 4.1E-18 112.6 5.7 169 12-226 6-175 (354)
43 KOG0513 Ca2+-independent phosp 99.2 2.6E-11 5.6E-16 107.4 4.2 166 11-226 293-477 (503)
44 cd00147 cPLA2_like Cytosolic p 98.1 6.1E-06 1.3E-10 72.5 6.1 53 10-71 41-95 (438)
45 cd07202 cPLA2_Grp-IVC Group IV 96.6 0.0018 3.9E-08 56.4 3.5 54 9-71 37-91 (430)
46 cd07201 cPLA2_Grp-IVB-IVD-IVE- 95.7 0.018 3.9E-07 51.8 4.9 53 10-71 52-105 (541)
47 PF01735 PLA2_B: Lysophospholi 94.9 0.035 7.5E-07 50.1 4.4 58 14-72 2-60 (491)
48 KOG1325 Lysophospholipase [Lip 94.5 0.038 8.2E-07 50.0 3.4 61 10-72 47-108 (571)
49 smart00022 PLAc Cytoplasmic ph 94.2 0.07 1.5E-06 48.6 4.7 61 10-72 75-136 (549)
50 cd07203 cPLA2_Fungal_PLB Funga 93.8 0.058 1.3E-06 48.9 3.3 62 11-72 63-126 (552)
51 cd07200 cPLA2_Grp-IVA Group IV 93.4 0.056 1.2E-06 48.5 2.4 53 10-71 43-96 (505)
52 smart00827 PKS_AT Acyl transfe 75.4 8.6 0.00019 31.9 5.9 32 49-87 80-111 (298)
53 PF00698 Acyl_transf_1: Acyl t 75.4 7.8 0.00017 32.8 5.7 32 49-87 82-113 (318)
54 PF05728 UPF0227: Uncharacteri 73.5 5 0.00011 31.4 3.7 18 53-70 61-78 (187)
55 TIGR00128 fabD malonyl CoA-acy 70.7 13 0.00029 30.6 5.9 31 50-87 82-112 (290)
56 PRK05282 (alpha)-aspartyl dipe 69.6 5.8 0.00013 32.2 3.4 15 53-67 114-128 (233)
57 PF00756 Esterase: Putative es 69.2 12 0.00026 30.0 5.3 19 53-71 117-135 (251)
58 TIGR03131 malonate_mdcH malona 69.0 15 0.00032 30.6 5.9 32 49-87 74-105 (295)
59 PRK00175 metX homoserine O-ace 67.0 9 0.0002 33.3 4.3 18 54-71 150-167 (379)
60 PF03575 Peptidase_S51: Peptid 66.9 2.4 5.2E-05 31.9 0.7 13 53-65 70-82 (154)
61 PF06361 RTBV_P12: Rice tungro 66.3 3.2 6.9E-05 27.7 1.0 44 21-67 46-89 (110)
62 COG0331 FabD (acyl-carrier-pro 63.8 24 0.00052 30.0 6.1 49 25-89 68-116 (310)
63 PLN02752 [acyl-carrier protein 58.8 34 0.00074 29.3 6.4 33 50-89 123-155 (343)
64 PF03959 FSH1: Serine hydrolas 58.5 12 0.00025 29.7 3.2 20 51-70 102-121 (212)
65 PF01764 Lipase_3: Lipase (cla 58.4 7.2 0.00016 28.2 1.9 17 54-70 67-83 (140)
66 TIGR01392 homoserO_Ac_trn homo 57.6 29 0.00063 29.6 5.8 19 53-71 129-147 (351)
67 cd03129 GAT1_Peptidase_E_like 55.4 29 0.00063 27.4 5.0 15 54-68 116-130 (210)
68 KOG2551 Phospholipase/carboxyh 54.9 15 0.00033 29.6 3.2 33 30-70 91-123 (230)
69 PF07859 Abhydrolase_3: alpha/ 52.3 9.9 0.00022 29.5 1.9 17 54-70 74-90 (211)
70 PRK04940 hypothetical protein; 47.0 32 0.00069 26.8 3.8 19 52-70 61-79 (180)
71 cd00741 Lipase Lipase. Lipase 43.9 17 0.00037 26.9 1.9 17 54-70 31-47 (153)
72 TIGR02069 cyanophycinase cyano 42.1 33 0.00071 28.2 3.5 14 53-66 117-130 (250)
73 PF08250 Sperm_act_pep: Sperm- 42.0 9.7 0.00021 14.9 0.2 7 16-22 3-9 (10)
74 PRK06489 hypothetical protein; 38.9 34 0.00074 29.3 3.3 21 51-71 154-174 (360)
75 KOG1454 Predicted hydrolase/ac 38.5 32 0.00069 29.4 3.0 18 54-71 131-148 (326)
76 PRK11071 esterase YqiA; Provis 38.5 97 0.0021 23.9 5.5 19 53-71 63-81 (190)
77 cd00519 Lipase_3 Lipase (class 37.9 22 0.00048 28.3 1.9 17 54-70 131-147 (229)
78 PRK06765 homoserine O-acetyltr 37.4 48 0.001 29.1 4.0 22 50-71 160-181 (389)
79 COG1647 Esterase/lipase [Gener 37.2 17 0.00036 29.5 1.0 18 54-71 88-105 (243)
80 COG3150 Predicted esterase [Ge 36.4 52 0.0011 25.6 3.4 35 29-70 44-78 (191)
81 COG2267 PldB Lysophospholipase 35.2 56 0.0012 27.4 3.9 38 28-71 90-127 (298)
82 PLN02571 triacylglycerol lipas 34.4 56 0.0012 29.0 3.8 17 54-70 229-245 (413)
83 cd03145 GAT1_cyanophycinase Ty 34.1 24 0.00052 28.2 1.5 14 54-67 119-132 (217)
84 TIGR03695 menH_SHCHC 2-succiny 32.6 28 0.00062 26.7 1.7 18 54-71 73-90 (251)
85 cd00312 Esterase_lipase Estera 32.5 58 0.0013 29.2 3.8 39 27-70 157-195 (493)
86 PRK10673 acyl-CoA esterase; Pr 32.1 31 0.00068 27.3 1.9 18 54-71 84-101 (255)
87 PF07812 TfuA: TfuA-like prote 31.4 48 0.001 24.0 2.4 48 24-90 9-56 (120)
88 PHA02857 monoglyceride lipase; 31.4 30 0.00066 28.0 1.7 18 54-71 100-117 (276)
89 PF00975 Thioesterase: Thioest 31.1 70 0.0015 25.0 3.7 18 52-69 67-84 (229)
90 PF12697 Abhydrolase_6: Alpha/ 30.9 88 0.0019 23.4 4.2 18 54-71 69-86 (228)
91 PRK13604 luxD acyl transferase 30.6 94 0.002 26.4 4.5 18 53-70 110-127 (307)
92 PRK11126 2-succinyl-6-hydroxy- 30.6 34 0.00074 26.9 1.8 19 53-71 68-86 (242)
93 PF12695 Abhydrolase_5: Alpha/ 30.5 37 0.00081 24.1 1.9 17 54-70 64-80 (145)
94 PRK08775 homoserine O-acetyltr 29.9 75 0.0016 26.9 3.9 18 54-71 141-158 (343)
95 PRK00536 speE spermidine synth 29.8 20 0.00044 29.7 0.4 21 1-21 61-83 (262)
96 PF00326 Peptidase_S9: Prolyl 29.6 37 0.00081 26.4 1.9 17 54-70 67-83 (213)
97 TIGR01250 pro_imino_pep_2 prol 29.5 34 0.00074 27.1 1.7 18 54-71 99-116 (288)
98 TIGR02813 omega_3_PfaA polyket 29.1 1.2E+02 0.0026 33.7 5.8 21 49-69 672-692 (2582)
99 TIGR03056 bchO_mg_che_rel puta 29.0 80 0.0017 25.1 3.8 18 54-71 98-115 (278)
100 PRK07581 hypothetical protein; 29.0 37 0.00081 28.6 1.9 19 53-71 126-144 (339)
101 PRK05077 frsA fermentation/res 28.8 1.1E+02 0.0023 27.1 4.8 18 54-71 268-285 (414)
102 TIGR02240 PHA_depoly_arom poly 28.8 38 0.00083 27.5 1.9 17 55-71 95-111 (276)
103 COG3340 PepE Peptidase E [Amin 28.6 39 0.00084 27.2 1.7 44 12-66 85-132 (224)
104 PF07819 PGAP1: PGAP1-like pro 28.0 38 0.00082 27.2 1.6 17 54-70 88-104 (225)
105 PLN02408 phospholipase A1 27.1 1E+02 0.0022 27.0 4.1 17 54-70 203-219 (365)
106 PRK10162 acetyl esterase; Prov 26.9 42 0.00092 28.3 1.8 17 54-70 157-173 (318)
107 TIGR00541 hisDCase_pyru histid 25.9 39 0.00085 28.0 1.4 68 50-138 72-139 (310)
108 PRK10566 esterase; Provisional 25.9 40 0.00086 26.8 1.4 18 54-71 110-127 (249)
109 TIGR02427 protocat_pcaD 3-oxoa 25.8 43 0.00092 25.8 1.6 18 54-71 82-99 (251)
110 TIGR03611 RutD pyrimidine util 25.7 45 0.00098 26.0 1.7 18 54-71 83-100 (257)
111 PF00135 COesterase: Carboxyle 25.6 59 0.0013 29.2 2.6 44 21-69 182-226 (535)
112 PLN02298 hydrolase, alpha/beta 25.5 42 0.0009 28.2 1.6 18 54-71 137-154 (330)
113 PRK03592 haloalkane dehalogena 25.5 47 0.001 27.2 1.8 19 53-71 95-113 (295)
114 PLN02965 Probable pheophorbida 25.2 41 0.0009 26.9 1.4 18 54-71 75-92 (255)
115 PF06576 DUF1133: Protein of u 25.0 2E+02 0.0043 22.3 4.9 25 48-72 30-54 (176)
116 PRK10439 enterobactin/ferric e 24.9 2.4E+02 0.0052 25.0 6.2 19 53-71 290-308 (411)
117 PLN02324 triacylglycerol lipas 24.5 1.2E+02 0.0026 27.0 4.2 17 54-70 218-234 (415)
118 PF00561 Abhydrolase_1: alpha/ 24.1 1.3E+02 0.0028 22.9 4.1 19 53-71 46-64 (230)
119 PLN02824 hydrolase, alpha/beta 24.1 52 0.0011 26.9 1.9 18 54-71 105-122 (294)
120 TIGR02821 fghA_ester_D S-formy 24.1 49 0.0011 27.2 1.7 18 54-71 141-158 (275)
121 PRK00870 haloalkane dehalogena 23.6 53 0.0011 27.1 1.8 18 54-71 118-135 (302)
122 TIGR01738 bioH putative pimelo 23.2 57 0.0012 25.0 1.8 18 54-71 68-85 (245)
123 cd02252 nylC_like nylC-like fa 22.8 1.3E+02 0.0029 24.9 3.9 33 5-37 51-84 (260)
124 cd00707 Pancreat_lipase_like P 22.7 58 0.0013 26.9 1.9 17 54-70 115-131 (275)
125 PLN02385 hydrolase; alpha/beta 22.6 49 0.0011 28.1 1.5 18 54-71 165-182 (349)
126 COG0657 Aes Esterase/lipase [L 22.5 44 0.00095 27.9 1.1 18 54-71 155-172 (312)
127 TIGR01840 esterase_phb esteras 22.5 60 0.0013 25.4 1.8 18 54-71 98-115 (212)
128 KOG1516 Carboxylesterase and r 22.4 1.2E+02 0.0025 27.7 3.9 45 21-70 169-214 (545)
129 COG2819 Predicted hydrolase of 22.1 1.2E+02 0.0025 25.3 3.4 17 53-69 139-155 (264)
130 PRK10749 lysophospholipase L2; 21.9 59 0.0013 27.4 1.8 18 54-71 134-151 (330)
131 cd03146 GAT1_Peptidase_E Type 21.8 52 0.0011 26.1 1.3 15 53-67 115-129 (212)
132 TIGR02816 pfaB_fam PfaB family 21.7 1.7E+02 0.0038 27.0 4.8 22 48-69 262-283 (538)
133 PLN02802 triacylglycerol lipas 21.3 1.1E+02 0.0025 27.9 3.5 16 54-69 333-348 (509)
134 TIGR03343 biphenyl_bphD 2-hydr 21.2 56 0.0012 26.3 1.5 18 54-71 104-121 (282)
135 PRK10349 carboxylesterase BioH 21.1 66 0.0014 25.6 1.9 21 50-71 74-94 (256)
136 PF08840 BAAT_C: BAAT / Acyl-C 20.9 64 0.0014 25.5 1.7 18 54-71 25-42 (213)
137 COG0578 GlpA Glycerol-3-phosph 20.6 74 0.0016 29.3 2.2 39 15-61 15-53 (532)
138 COG3509 LpqC Poly(3-hydroxybut 20.6 1.3E+02 0.0028 25.6 3.4 45 23-71 120-164 (312)
139 PF12611 DUF3766: Protein of u 20.3 63 0.0014 16.3 1.0 17 147-163 2-18 (24)
140 PLN02719 triacylglycerol lipas 20.2 1.2E+02 0.0027 27.7 3.4 16 54-69 301-316 (518)
141 PLN02847 triacylglycerol lipas 20.2 65 0.0014 30.1 1.7 17 54-70 254-270 (633)
No 1
>cd07214 Pat17_isozyme_like Patatin-like phospholipase of plants. Pat17 is an isozyme of patatin cloned from Solanum cardiophyllum. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue, and Nu = nucleophile). Patatin-like phospholipase are included in this group. Members of this family have also been found in vertebrates.
Probab=100.00 E-value=4.3e-49 Score=336.45 Aligned_cols=210 Identities=63% Similarity=1.033 Sum_probs=180.8
Q ss_pred CCeEEEEEeeCCchhhHHHHHHHHHHHHHhhhcCCCCCccccccceeeecCHHHHHHHHhcCCCCCCCccccHHHHHHHH
Q 027230 9 GKKITVLSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFY 88 (226)
Q Consensus 9 ~~~~~iL~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~ 88 (226)
++++|||||||||+||+++++||++||++++++.|++.++.++||+|+|||+|||+|++|+.++..++|.++++|+.++|
T Consensus 1 ~~~~rILslDGGGiRGi~~a~iL~~lE~~l~~~~g~~~~i~~~FDliaGTStGgiiA~~la~~~~~~~p~~~~~e~~~~y 80 (349)
T cd07214 1 GKFITVLSIDGGGIRGIIPATILEFLEGKLQELDGPDARIADYFDVIAGTSTGGLITAMLTAPNENKRPLFAAKDIVQFY 80 (349)
T ss_pred CCceEEEEECCCchhhHHHHHHHHHHHHHHHHhcCCCCCHhHhCCEEeeCCHHHHHHHHHhcCCCCCCCccCHHHHHHHH
Confidence 46799999999999999999999999999988777778899999999999999999999999877789999999999999
Q ss_pred HhhCCCCcCCCccCCchhHHHHhhhccccccCCChHHHHHHHHHHhcccchhhhcCceEEEEeecCCCcceEeeccchhh
Q 027230 89 FEHCPKIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDITIKDTLTNLIIPTFDIKRLQPVIFSSNDALQ 168 (226)
Q Consensus 89 ~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~~~~~~l~v~a~~~~~~~~~~f~~~~~~~ 168 (226)
.+.+.++|..... .+..+.+.++.+..+.|+++.|+++|+++|++.++.|+.++++|+|+|+.+++|++|++ |.
T Consensus 81 ~~~~~~iF~~~~~---~~~~~~~~~~~~~~~~y~~~~L~~~L~~~~gd~~l~d~~~~v~I~a~dl~~~~p~~F~~---~~ 154 (349)
T cd07214 81 LENGPKIFPQSTG---QFEDDRKKLRSLLGPKYDGVYLHDLLNELLGDTRLSDTLTNVVIPTFDIKLLQPVIFSS---SK 154 (349)
T ss_pred HHhhHHhcCCCcc---cchhHHHHHHHhccCccCcHHHHHHHHHHhccccHhhhCCceEEEeEECCCCCeEEEeC---cc
Confidence 9999999987543 11122333445567899999999999999999999999999999999999999999999 77
Q ss_pred hhcCCCCCchHHHHHhHhccCCCCCCceeeeccCCCCCCcccceeeecccccCCCCC
Q 027230 169 VKKGALKNARLADICVGTSAAPTYLPAHHFVTKDSTTGDTCSFDLIDGGVAANDPVI 225 (226)
Q Consensus 169 ~~~~~~~~~~l~~a~~ASsA~P~~F~p~~i~~~~~~~g~~~~~~~iDGGv~~N~P~l 225 (226)
...+...+.++|+|++||||+|+||||+.+...+. .|..+++.|||||+.+|||++
T Consensus 155 ~~~~~~~~~~l~da~rASSAaPtyFpp~~i~~~~~-~g~~~~~~~vDGGv~aNNP~~ 210 (349)
T cd07214 155 AKNDKLTNARLADVCISTSAAPTYFPAHYFTTEDS-NGDIREFNLVDGGVAANNPTL 210 (349)
T ss_pred ccCCcccCcCHHHHHHHhcccccccCCeEeecccC-CCCcceEEEecCceecCCHHH
Confidence 66555678999999999999999999999874321 122234579999999999975
No 2
>cd07215 Pat17_PNPLA8_PNPLA9_like2 Patatin-like phospholipase of bacteria. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=100.00 E-value=2.3e-45 Score=312.17 Aligned_cols=199 Identities=40% Similarity=0.670 Sum_probs=169.9
Q ss_pred EEEEeeCCchhhHHHHHHHHHHHHHhhhcCCC-CCccccccceeeecCHHHHHHHHhcCCCCCCCccccHHHHHHHHHhh
Q 027230 13 TVLSIDGGGVKGIIPGTILAFLESRLQDLDGP-NARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFEH 91 (226)
Q Consensus 13 ~iL~LdGGG~rG~~~~gvL~~L~~~~~~~~g~-~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~~ 91 (226)
|||||||||+||++++++|++||+++++..|. +++++++||+|+|||+|||+|++++.+..++++.++++|+.++|.+.
T Consensus 1 rILslDGGGirG~~~~~iL~~le~~l~~~~g~~~~~i~~~fDli~GTStGgiia~~l~~~~~~g~~~~s~~e~~~~y~~~ 80 (329)
T cd07215 1 RILSIDGGGIRGIIPATILVSVEEKLQKKTGNPEARLADYFDLVAGTSTGGILTCLYLCPNESGRPKFSAKEALNFYLER 80 (329)
T ss_pred CEEEEcCChHHHHHHHHHHHHHHHHHhhhcCCCCCcHhhccCeeeccCHHHHHHHHHhCCCCCCCCCcCHHHHHHHHHHh
Confidence 69999999999999999999999998765553 46899999999999999999999887766678889999999999999
Q ss_pred CCCCcCCCccCCchhHHHHhhhccccccCCChHHHHHHHHHHhcccchhhhcCceEEEEeecCCCcceEeeccchhhhhc
Q 027230 92 CPKIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDITIKDTLTNLIIPTFDIKRLQPVIFSSNDALQVKK 171 (226)
Q Consensus 92 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~~~~~~l~v~a~~~~~~~~~~f~~~~~~~~~~ 171 (226)
..++|+...+ ..+ .....+..+.|+.+.|++.|+++|++.+|.|+.++++|+++|+.++++++|++ +....
T Consensus 81 ~~~IF~~~~~--~~~----~~~~~~~~~~y~~~~L~~~L~~~fg~~~l~d~~~~~~i~a~d~~~~~~~~f~~---~~~~~ 151 (329)
T cd07215 81 GNYIFKKKIW--NKI----KSRGGFLNEKYSHKPLEEVLLEYFGDTKLSELLKPCLITSYDIERRSPHFFKS---HTAIK 151 (329)
T ss_pred hHhhcccchh--hhh----hhhccccccccCcHHHHHHHHHHhCCCchhhhcCCceEEeeecCCCCceEecC---cccCC
Confidence 9999987542 111 11234567899999999999999999999999999999999999999999998 55444
Q ss_pred CCCCCchHHHHHhHhccCCCCCCceeeeccCCCCCCcccceeeecccccCCCCC
Q 027230 172 GALKNARLADICVGTSAAPTYLPAHHFVTKDSTTGDTCSFDLIDGGVAANDPVI 225 (226)
Q Consensus 172 ~~~~~~~l~~a~~ASsA~P~~F~p~~i~~~~~~~g~~~~~~~iDGGv~~N~P~l 225 (226)
++..+..+|+|++||||+|+||||+.++..+ | +++.|+|||+.+|||++
T Consensus 152 ~~~~~~~l~da~~ASsAaP~~F~p~~i~~~~---g--~~~~~vDGGv~aNnP~~ 200 (329)
T cd07215 152 NEQRDFYVRDVARATSAAPTYFEPARIHSLT---G--EKYTLIDGGVFANNPTL 200 (329)
T ss_pred CcccCccHHHHhHHHhhcccccCceEeecCC---C--cEEEEecCceecCCHHH
Confidence 4556788999999999999999999987531 2 23469999999999975
No 3
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=100.00 E-value=2.3e-43 Score=297.74 Aligned_cols=190 Identities=25% Similarity=0.386 Sum_probs=156.1
Q ss_pred CCCCCCeEEEEEeeCCchhhHHHHHHHHHHHHHhhhcCCCCCccccccceeeecCHHHHHHHHhcCCCCCCCccccHHHH
Q 027230 5 TIAKGKKITVLSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDI 84 (226)
Q Consensus 5 ~~~~~~~~~iL~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~ 84 (226)
||++++++|||||||||+||++++++|++||++++. ++++.||+|+|||+|||+|++|+.+. ++++|+
T Consensus 1 ~~~~~~~~riLsLdGGGirG~~~~~vL~~Le~~~~~------~i~~~fDli~GTStGgiiA~~la~~~------~~~~e~ 68 (308)
T cd07211 1 PPVKGRGIRILSIDGGGTRGVVALEILRKIEKLTGK------PIHELFDYICGVSTGAILAFLLGLKK------MSLDEC 68 (308)
T ss_pred CCCCCCCcEEEEECCChHHHHHHHHHHHHHHHHhCC------CchhhcCEEEecChhHHHHHHHhccc------ccHHHH
Confidence 789999999999999999999999999999998642 68899999999999999999999753 899999
Q ss_pred HHHHHhhCCCCcCCCccCCchhHHHHhhhccccccCCChHHHHHHHHHHhcccchhhhc-----CceEEEEeec--CCCc
Q 027230 85 NNFYFEHCPKIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDITIKDTL-----TNLIIPTFDI--KRLQ 157 (226)
Q Consensus 85 ~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~~~~-----~~l~v~a~~~--~~~~ 157 (226)
.++|.++..++|....+. .. ..++ .+..+.|+.+.|+++|+++|++.++.+.. .+++|+++++ .+.+
T Consensus 69 ~~~y~~~~~~iF~~~~~~---~~-~~~~--~~~~~~y~~~~l~~~l~~~~g~~~l~~~~~~~~~p~~~v~st~~~~~~~~ 142 (308)
T cd07211 69 EELYRKLGKDVFSQNTYI---SG-TSRL--VLSHAYYDTETWEKILKEMMGSDELIDTSADPNCPKVACVSTQVNRTPLK 142 (308)
T ss_pred HHHHHHHHHHhcCCCccc---cc-hhhh--hccCCccChHHHHHHHHHHhCCccccccccCCCCCEEEEEEEeccCCCCc
Confidence 999999999999875421 10 0011 23467899999999999999988877643 2366677655 5678
Q ss_pred ceEeeccchhhhhcCC------CCCchHHHHHhHhccCCCCCCceeeeccCCCCCCcccceeeecccccCCCCC
Q 027230 158 PVIFSSNDALQVKKGA------LKNARLADICVGTSAAPTYLPAHHFVTKDSTTGDTCSFDLIDGGVAANDPVI 225 (226)
Q Consensus 158 ~~~f~~~~~~~~~~~~------~~~~~l~~a~~ASsA~P~~F~p~~i~~~~~~~g~~~~~~~iDGGv~~N~P~l 225 (226)
+++|++ |..+.+. ..+.++|+|+|||||+|+||||+++++. .|+|||+.+|||++
T Consensus 143 p~~f~n---y~~~~~~~~~~~~~~~~~l~dA~rASsAaP~~F~p~~i~~~----------~~vDGGv~aNnP~~ 203 (308)
T cd07211 143 PYVFRN---YNHPPGTRSHYLGSCKHKLWEAIRASSAAPGYFEEFKLGNN----------LHQDGGLLANNPTA 203 (308)
T ss_pred eEEEeC---CCCCCCcccccCCcccccHHHHHHHhccchhcCCcEEECCC----------eEEECCcccCCcHH
Confidence 999999 7654321 3467899999999999999999998743 79999999999974
No 4
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=100.00 E-value=3.6e-42 Score=292.31 Aligned_cols=195 Identities=26% Similarity=0.434 Sum_probs=154.8
Q ss_pred EEEEEeeCCchhhHHHHHHHHHHHHHhhhcCC-CCCccccccceeeecCHHHHHHHHhcCCCCCCCccccHHHHHHHHHh
Q 027230 12 ITVLSIDGGGVKGIIPGTILAFLESRLQDLDG-PNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFE 90 (226)
Q Consensus 12 ~~iL~LdGGG~rG~~~~gvL~~L~~~~~~~~g-~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~ 90 (226)
.|||||||||+||++++++|++||+++++..+ ++++++++||+|+|||+|||+|++++.+ ++++|+.++|.+
T Consensus 1 ~rILsLDGGGiRGi~~~gvL~~LE~~l~~~~~~p~~~l~d~FDlIaGTStGgIIAa~la~g-------~s~~ei~~~y~~ 73 (344)
T cd07217 1 KKILALDGGGIRGLLSVEILGRIEKDLRTHLDDPEFRLGDYFDFVGGTSTGSIIAACIALG-------MSVTDLLSFYTL 73 (344)
T ss_pred CEEEEEcCCHHHHHHHHHHHHHHHHHhhhccCCccccccccccEEEEecHHHHHHHHHHcC-------CCHHHHHHHHHh
Confidence 47999999999999999999999998875433 4567899999999999999999999987 899999999999
Q ss_pred hCCCCcCCCccCCchhHHHHhhhccccccCCChHHHHHHHHHHhcccchhh--hcCceEEEEeecCCCcceEeeccch--
Q 027230 91 HCPKIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDITIKD--TLTNLIIPTFDIKRLQPVIFSSNDA-- 166 (226)
Q Consensus 91 ~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~~--~~~~l~v~a~~~~~~~~~~f~~~~~-- 166 (226)
...++|....+ .. .+......+.|+.+.|++.|+++|++.++.+ ..++++|+++|+.++++++|++...
T Consensus 74 ~~~~iF~~~~~----~~---~l~~~~~~~~y~~~~L~~~L~~~fg~~~l~d~~~~~~l~i~a~dl~tg~p~~f~~~~~~~ 146 (344)
T cd07217 74 NGVNMFDKAWL----AQ---RLFLNKLYNQYDPTNLGKKLNTVFPETTLGDDTLRTLLMIVTRNATTGSPWPVCNNPEAK 146 (344)
T ss_pred hhhhhcCchhh----hh---hccccccccccCcHHHHHHHHHHcCceeecccccCceEEEEEEecCCCCeeEeecCchhh
Confidence 99999987532 11 0111111245999999999999999999987 3467999999999999999998321
Q ss_pred hhh--hcCCCCCchHHHHHhHhccCCCCCCceeeeccCCCCCCcccceeeecccc-cCCCCC
Q 027230 167 LQV--KKGALKNARLADICVGTSAAPTYLPAHHFVTKDSTTGDTCSFDLIDGGVA-ANDPVI 225 (226)
Q Consensus 167 ~~~--~~~~~~~~~l~~a~~ASsA~P~~F~p~~i~~~~~~~g~~~~~~~iDGGv~-~N~P~l 225 (226)
|.. ..+...+.++|+|+|||||+|+||||+.+.... | .++.|||||+. .|||++
T Consensus 147 ~~~~~~~~~~~~~~L~da~rASsAaPt~FpP~~i~~~~---~--~~~~lVDGGv~aaNNP~l 203 (344)
T cd07217 147 YNDSDRSDCNLDLPLWQLVRASTAAPTFFPPEVVSIAP---G--TAFVFVDGGVTTYNNPAF 203 (344)
T ss_pred cccccccCcccCCcHHHHHHHHccCccccCceEEEecC---C--ceEEEECCccccccCHHH
Confidence 111 111235689999999999999999999875321 1 13589999999 699984
No 5
>cd07216 Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=100.00 E-value=6.4e-42 Score=288.86 Aligned_cols=190 Identities=28% Similarity=0.428 Sum_probs=155.4
Q ss_pred EEEEEeeCCchhhHHHHHHHHHHHHHhhhcCC--CCCccccccceeeecCHHHHHHHHhcCCCCCCCccccHHHHHHHHH
Q 027230 12 ITVLSIDGGGVKGIIPGTILAFLESRLQDLDG--PNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYF 89 (226)
Q Consensus 12 ~~iL~LdGGG~rG~~~~gvL~~L~~~~~~~~g--~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~ 89 (226)
+|||||||||+||++++++|++||++++...| +.++++++||+|+|||+|||+|++|+.. .++++|+.++|.
T Consensus 1 ~rILslDGGGiRGl~~~~iL~~le~~l~~~~~~~~~~~~~~~fDli~GTStGgiiA~~l~~~------~~t~~e~~~~y~ 74 (309)
T cd07216 1 LNLLSLDGGGVRGLSSLLILKEIMERIDPKEGLDEPPKPCDYFDLIGGTSTGGLIAIMLGRL------RMTVDECIDAYT 74 (309)
T ss_pred CcEEEEcCCchhHHHHHHHHHHHHHHhhhccccCCCCChhHhcCeeeeccHHHHHHHHhccc------CCCHHHHHHHHH
Confidence 48999999999999999999999999865332 2457899999999999999999999843 289999999999
Q ss_pred hhCCCCcCCCccCCchhHHHHhhhccccccCCChHHHHHHHHHHhcccchh---------hhcCceEEEEeecC-CCcce
Q 027230 90 EHCPKIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDITIK---------DTLTNLIIPTFDIK-RLQPV 159 (226)
Q Consensus 90 ~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~---------~~~~~l~v~a~~~~-~~~~~ 159 (226)
++..++|....+. .. ....+..+.|+.+.+++.+++++++..+. +..++++|++|+.+ +++++
T Consensus 75 ~~~~~iF~~~~~~--~~-----~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~~~~~~~~ 147 (309)
T cd07216 75 RLAKKIFSRKRLR--LI-----IGDLRTGARFDSKKLAEAIKVILKELGNDEDDLLDEGEEDGCKVFVCATDKDVTGKAV 147 (309)
T ss_pred HHhHHhCCCCCcc--cc-----ccccccCCCCChHHHHHHHHHHHHhcCCCchhhhccccccCCCEEEEEEeeCCCCceE
Confidence 9999999876532 10 01123456799999999999999865443 23568999999998 99999
Q ss_pred EeeccchhhhhcCC--CCCchHHHHHhHhccCCCCCCceeeeccCCCCCCcccceeeecccccCCCCC
Q 027230 160 IFSSNDALQVKKGA--LKNARLADICVGTSAAPTYLPAHHFVTKDSTTGDTCSFDLIDGGVAANDPVI 225 (226)
Q Consensus 160 ~f~~~~~~~~~~~~--~~~~~l~~a~~ASsA~P~~F~p~~i~~~~~~~g~~~~~~~iDGGv~~N~P~l 225 (226)
+|++ |+..... ..+..+|+|++||||+|+||+|+++.+. ...|+|||+.+|||++
T Consensus 148 ~f~~---y~~~~~~~~~~~~~l~~a~rASsAaP~~f~p~~~~~~--------~~~~vDGGv~~NnP~~ 204 (309)
T cd07216 148 RLRS---YPSKDEPSLYKNATIWEAARATSAAPTFFDPVKIGPG--------GRTFVDGGLGANNPIR 204 (309)
T ss_pred EEec---CCCCCCCCcccCccHHHHHHHHhhhHhhCCCEEecCC--------CceEecCCcccCCcHH
Confidence 9999 8754432 5678999999999999999999998411 1389999999999974
No 6
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=100.00 E-value=4.9e-40 Score=276.64 Aligned_cols=163 Identities=25% Similarity=0.424 Sum_probs=138.3
Q ss_pred EEEeeCCchhhHHHHHHHHHHHHHhhhcCCCCCccccccceeeecCHHHHHHHHhcCCCCCCCccccHHHHHHHHHhhCC
Q 027230 14 VLSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFEHCP 93 (226)
Q Consensus 14 iL~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~~~~ 93 (226)
||||||||+||++++++|++||++++ .+++++||+|+|||+|||+|++++.+ ++++||.++|.++..
T Consensus 1 ILsLDGGG~RGl~~i~vL~~le~~~g------~~i~~~fD~i~GTStGgiIA~~la~g-------~s~~e~~~~y~~~~~ 67 (312)
T cd07212 1 LLCLDGGGIRGLVLIQMLIAIEKALG------RPIRELFDWIAGTSTGGILALALLHG-------KSLREARRLYLRMKD 67 (312)
T ss_pred CEEECCcHHHHHHHHHHHHHHHHHhC------CCchhhccEEEeeChHHHHHHHHHcC-------CCHHHHHHHHHHhhh
Confidence 69999999999999999999999764 26889999999999999999999987 899999999999988
Q ss_pred CCcCCCccCCchhHHHHhhhccccccCCChHHHHHHHHHHhccc-chhhhcCceEEEEeecCC---CcceEeeccchhhh
Q 027230 94 KIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDI-TIKDTLTNLIIPTFDIKR---LQPVIFSSNDALQV 169 (226)
Q Consensus 94 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~l~~~~~~l~v~a~~~~~---~~~~~f~~~~~~~~ 169 (226)
++|... ..|++++++++|+++|++. ++.|...+.++++++..+ .++++|++ |..
T Consensus 68 ~iF~~~-------------------~~y~~~~le~~L~~~~g~~~~l~d~~~p~~~v~~~~~~~~~~~~~~f~n---y~~ 125 (312)
T cd07212 68 RVFDGS-------------------RPYNSEPLEEFLKREFGEDTKMTDVKYPRLMVTGVLADRQPVQLHLFRN---YDP 125 (312)
T ss_pred hhCCCC-------------------CCCCChHHHHHHHHHHCcCccccccCCCeEEEEeEeccCCCcCceeeec---CCC
Confidence 888653 2589999999999999987 788877765555555544 45589999 764
Q ss_pred hcCC--------------CCCchHHHHHhHhccCCCCCCceeeeccCCCCCCcccceeeecccccCCCCC
Q 027230 170 KKGA--------------LKNARLADICVGTSAAPTYLPAHHFVTKDSTTGDTCSFDLIDGGVAANDPVI 225 (226)
Q Consensus 170 ~~~~--------------~~~~~l~~a~~ASsA~P~~F~p~~i~~~~~~~g~~~~~~~iDGGv~~N~P~l 225 (226)
+.+. ..+..+|+|+|||+|+|+||+|+ + .|+|||+.+|||++
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~l~~a~rASsAaP~~F~p~--~------------~~vDGGv~~NnP~~ 181 (312)
T cd07212 126 PEDVEEPEKNANFLPPTDPAEQLLWRAARSSGAAPTYFRPM--G------------RFLDGGLIANNPTL 181 (312)
T ss_pred CCCchhccccccccccCCcccccHHHHHHhhcccccccccc--c------------ceecCceeccChHH
Confidence 4321 23689999999999999999998 1 58999999999985
No 7
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=100.00 E-value=1.8e-39 Score=271.32 Aligned_cols=171 Identities=32% Similarity=0.584 Sum_probs=145.0
Q ss_pred eEEEEEeeCCchhhHHHHHHHHHHHHHhhhcCCCCCccccccceeeecCHHHHHHHHhcCCCCCCCccccHHHHHHHHHh
Q 027230 11 KITVLSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFE 90 (226)
Q Consensus 11 ~~~iL~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~ 90 (226)
++|||||||||+||++++++|++||++.. ++.+.||+|+|||+|||+|++|+.+ ++++++.++|.+
T Consensus 1 ~~riLsLdGGG~RGi~~~~vL~~Le~~~~-------~~~~~fD~i~GTSaGaiia~~la~g-------~~~~e~~~~~~~ 66 (288)
T cd07213 1 KYRILSLDGGGVKGIVQLVLLKRLAEEFP-------SFLDQIDLFAGTSAGSLIALGLALG-------YSPRQVLKLYEE 66 (288)
T ss_pred CeEEEEECCCcHHHHHHHHHHHHHHHhCc-------ccccceeEEEEeCHHHHHHHHHHcC-------cCHHHHHHHHHH
Confidence 57999999999999999999999999742 5778999999999999999999988 689999999999
Q ss_pred hCCCCcCCCccCCchhHHHHhhhccccccCCChH-HHHHHHHHHhcccchhhhcCceEEEEeecCCCc--------ceEe
Q 027230 91 HCPKIFPQLSRGGNFLRSIISSLSKWVRPMYDGK-YIRSLTKEILEDITIKDTLTNLIIPTFDIKRLQ--------PVIF 161 (226)
Q Consensus 91 ~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~~~~~~~l~~~~~~l~v~a~~~~~~~--------~~~f 161 (226)
...++|...... ..+....|... .+++++++.|++.+|.|+.++++|+++|+++++ +++|
T Consensus 67 ~~~~iF~~~~~~-----------~~~~~~~~~~~~~l~~~l~~~~~~~~l~d~~~~~~i~a~~~~~~~~~~~~~~~~~~f 135 (288)
T cd07213 67 VGLKVFSKSSAG-----------GGAGNNQYFAAGFLKAFAEVFFGDLTLGDLKRKVLVPSFQLDSGKDDPNRRWKPKLF 135 (288)
T ss_pred hCccccCCCccc-----------cccccccCCchHHHHHHHHHHhCcCCHhhcCCCEEEEEEeccCCCCCccccccceEe
Confidence 999999775421 01122334434 899999999999999999999999999999886 6899
Q ss_pred eccchhhhhcCCCCCchHHHHHhHhccCCCCCCceeeeccCCCCCCcccceeeecccccCCCCC
Q 027230 162 SSNDALQVKKGALKNARLADICVGTSAAPTYLPAHHFVTKDSTTGDTCSFDLIDGGVAANDPVI 225 (226)
Q Consensus 162 ~~~~~~~~~~~~~~~~~l~~a~~ASsA~P~~F~p~~i~~~~~~~g~~~~~~~iDGGv~~N~P~l 225 (226)
++ +... ...+..+|+|++||||+|+||||+. .|+|||+.+|||++
T Consensus 136 ~n---~~~~--~~~~~~l~d~~~ASsAaP~~F~p~~--------------~~iDGGv~~NnP~~ 180 (288)
T cd07213 136 HN---FPGE--PDLDELLVDVCLRSSAAPTYFPSYQ--------------GYVDGGVFANNPSL 180 (288)
T ss_pred ec---CCCC--CCccccHHHHHHHhccccccchhhh--------------ceecceeecCChHH
Confidence 88 5432 2456899999999999999999982 69999999999974
No 8
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=100.00 E-value=1e-37 Score=246.85 Aligned_cols=171 Identities=26% Similarity=0.304 Sum_probs=137.2
Q ss_pred EEeeCCchhhHHHHHHHHHHHHHhhhcCCCCCccccccceeeecCHHHHHHHHhcCCCCCCCccccHHHHHHHHHhhCCC
Q 027230 15 LSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFEHCPK 94 (226)
Q Consensus 15 L~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~~~~~ 94 (226)
|||+|||+||++++|||++|+|+ ...||+|+|||+||++|++++++ ++.+++.+.+.....+
T Consensus 2 Lvl~GGG~rG~~~~Gvl~~L~e~-----------~~~~d~i~GtSaGai~aa~~a~g-------~~~~~~~~~~~~~~~~ 63 (194)
T cd07207 2 LVFEGGGAKGIAYIGALKALEEA-----------GILKKRVAGTSAGAITAALLALG-------YSAADIKDILKETDFA 63 (194)
T ss_pred eEEcCchHHHHHHHHHHHHHHHc-----------CCCcceEEEECHHHHHHHHHHcC-------CCHHHHHHHHHhCCHH
Confidence 89999999999999999999884 24579999999999999999998 6789999988876555
Q ss_pred CcCCCccCCchhHHHHhhhccccccCCChHHHHHHHHHHhcccch------------hhhcCceEEEEeecCCCcceEee
Q 027230 95 IFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDITI------------KDTLTNLIIPTFDIKRLQPVIFS 162 (226)
Q Consensus 95 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l------------~~~~~~l~v~a~~~~~~~~~~f~ 162 (226)
.|..... .....+..++ ...+.|+.+.+++.+++.+++..+ .+..+++.|++||++++++++|+
T Consensus 64 ~~~~~~~--~~~~~~~~~~--~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~I~atd~~tg~~~~f~ 139 (194)
T cd07207 64 KLLDSPV--GLLFLLPSLF--KEGGLYKGDALEEWLRELLKEKTGNSFATSLLRDLDDDLGKDLKVVATDLTTGALVVFS 139 (194)
T ss_pred HHhccch--hhhHHHHHHH--hhcCCccHHHHHHHHHHHHHhccCCcccchhhhhhccccCCcEEEEEEECCCCCEEEec
Confidence 4433211 1111122221 135679999999999999976554 55678999999999999999998
Q ss_pred ccchhhhhcCCCCCchHHHHHhHhccCCCCCCceeee-ccCCCCCCcccceeeecccccCCCCC
Q 027230 163 SNDALQVKKGALKNARLADICVGTSAAPTYLPAHHFV-TKDSTTGDTCSFDLIDGGVAANDPVI 225 (226)
Q Consensus 163 ~~~~~~~~~~~~~~~~l~~a~~ASsA~P~~F~p~~i~-~~~~~~g~~~~~~~iDGGv~~N~P~l 225 (226)
. .. .++..+|+|++||||+|++|||++++ +. .|+|||+.+|+|+.
T Consensus 140 ~---~~-----~~~~~l~~av~AS~AiP~~f~pv~i~~g~----------~~vDGG~~~n~Pv~ 185 (194)
T cd07207 140 A---ET-----TPDMPVAKAVRASMSIPFVFKPVRLAKGD----------VYVDGGVLDNYPVW 185 (194)
T ss_pred C---CC-----CCcccHHHHHHHHcCCCcccccEEeCCCe----------EEEeCccccCCCch
Confidence 7 22 23568999999999999999999997 43 89999999999973
No 9
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=100.00 E-value=2.5e-37 Score=240.92 Aligned_cols=158 Identities=26% Similarity=0.366 Sum_probs=135.2
Q ss_pred EEEeeCCchhhHHHHHHHHHHHHHhhhcCCCCCccccccceeeecCHHHHHHHHhcCCCCCCCccccHHHHHHHHHhhCC
Q 027230 14 VLSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFEHCP 93 (226)
Q Consensus 14 iL~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~~~~ 93 (226)
.|+|+|||+||++|+|+|++|+++ ...||+|+|||+||++|++++.+ ++.+++.+.|.+...
T Consensus 2 ~Lvl~GGG~rG~~~~Gvl~~L~~~-----------~~~~d~i~GtSaGal~a~~~a~g-------~~~~~~~~~~~~~~~ 63 (175)
T cd07205 2 GLALSGGGARGLAHIGVLKALEEA-----------GIPIDIVSGTSAGAIVGALYAAG-------YSPEEIEERAKLRST 63 (175)
T ss_pred eEEEeChhHHHHHHHHHHHHHHHc-----------CCCeeEEEEECHHHHHHHHHHcC-------CCHHHHHHHHHhhcc
Confidence 599999999999999999999884 24699999999999999999988 678898888875544
Q ss_pred CCcCCCccCCchhHHHHhhhccccccCCChHHHHHHHHHHhcccchhhhcCceEEEEeecCCCcceEeeccchhhhhcCC
Q 027230 94 KIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDITIKDTLTNLIIPTFDIKRLQPVIFSSNDALQVKKGA 173 (226)
Q Consensus 94 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~~~~~~l~v~a~~~~~~~~~~f~~~~~~~~~~~~ 173 (226)
+.+..... .....+.|+.+.+++.+++.++..++++..+++.|++||++++++++|++
T Consensus 64 ~~~~~~~~------------~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~l~i~a~~l~~g~~~~f~~---------- 121 (175)
T cd07205 64 DLKALSDL------------TIPTAGLLRGDKFLELLDEYFGDRDIEDLWIPFFIVATDLTSGKLVVFRS---------- 121 (175)
T ss_pred chhhhhcc------------ccccccccChHHHHHHHHHHcCCCcHHHCCCCEEEEEEECCCCCEEEEcC----------
Confidence 43322110 01135679999999999999999999999999999999999999999876
Q ss_pred CCCchHHHHHhHhccCCCCCCceeeeccCCCCCCcccceeeecccccCCCC
Q 027230 174 LKNARLADICVGTSAAPTYLPAHHFVTKDSTTGDTCSFDLIDGGVAANDPV 224 (226)
Q Consensus 174 ~~~~~l~~a~~ASsA~P~~F~p~~i~~~~~~~g~~~~~~~iDGGv~~N~P~ 224 (226)
..+|+|++||||+|++|||++++++ .|+|||+.+|+|+
T Consensus 122 ---~~l~~av~AS~a~P~~f~pv~~~g~----------~~~DGG~~~n~P~ 159 (175)
T cd07205 122 ---GSLVRAVRASMSIPGIFPPVKIDGQ----------LLVDGGVLNNLPV 159 (175)
T ss_pred ---CCHHHHHHHHcccccccCCEEECCE----------EEEeccCcCCccH
Confidence 3599999999999999999999754 8999999999996
No 10
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=100.00 E-value=3.3e-36 Score=234.53 Aligned_cols=157 Identities=24% Similarity=0.307 Sum_probs=127.0
Q ss_pred EEEeeCCchhhHHHHHHHHHHHHHhhhcCCCCCccccccceeeecCHHHHHHHHhcCCCCCCCccccHHHHHHHHHhhCC
Q 027230 14 VLSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFEHCP 93 (226)
Q Consensus 14 iL~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~~~~ 93 (226)
.|+|+|||+||++|+|+|++|+|+ ...||+|+|||+|||+|++++.+ ++.+++.+ +.....
T Consensus 2 ~LvL~GGG~rG~~~~Gvl~~L~e~-----------g~~~d~i~GtSaGAi~aa~~a~g-------~~~~~~~~-~~~~~~ 62 (175)
T cd07228 2 GLALGSGGARGWAHIGVLRALEEE-----------GIEIDIIAGSSIGALVGALYAAG-------HLDALEEW-VRSLSQ 62 (175)
T ss_pred EEEecCcHHHHHHHHHHHHHHHHC-----------CCCeeEEEEeCHHHHHHHHHHcC-------CCHHHHHH-HHhhhH
Confidence 599999999999999999999884 24699999999999999999998 44455433 221110
Q ss_pred -CCcCCCccCCchhHHHHhhhccccccCCChHHHHHHHHHHhcccchhhhcCceEEEEeecCCCcceEeeccchhhhhcC
Q 027230 94 -KIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDITIKDTLTNLIIPTFDIKRLQPVIFSSNDALQVKKG 172 (226)
Q Consensus 94 -~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~~~~~~l~v~a~~~~~~~~~~f~~~~~~~~~~~ 172 (226)
+.+.. + . ......+.++.+++++.|++.+++.+++++.+++.|++||++++++++|++
T Consensus 63 ~~~~~~-------~----~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~l~i~at~~~tg~~~~f~~--------- 121 (175)
T cd07228 63 RDVLRL-------L----D-LSASRSGLLKGEKVLEYLREIMGGVTIEELPIPFAAVATDLQTGKEVWFRE--------- 121 (175)
T ss_pred HHHHhh-------c----c-cCCCcccccCHHHHHHHHHHHcCCCCHHHCCCCEEEEEEECCCCCEEEECC---------
Confidence 11100 0 0 001135678999999999999999999999999999999999999999987
Q ss_pred CCCCchHHHHHhHhccCCCCCCceeeeccCCCCCCcccceeeecccccCCCC
Q 027230 173 ALKNARLADICVGTSAAPTYLPAHHFVTKDSTTGDTCSFDLIDGGVAANDPV 224 (226)
Q Consensus 173 ~~~~~~l~~a~~ASsA~P~~F~p~~i~~~~~~~g~~~~~~~iDGGv~~N~P~ 224 (226)
..+++|++||||+|++|||+.+++. .|+|||+.+|.|+
T Consensus 122 ----~~l~~av~AS~a~P~~f~p~~~~g~----------~~vDGG~~~~~P~ 159 (175)
T cd07228 122 ----GSLIDAIRASISIPGIFAPVEHNGR----------LLVDGGVVNPIPV 159 (175)
T ss_pred ----CCHHHHHHHHcccCccccCEEECCE----------EEEeccCcCCCcH
Confidence 2499999999999999999999754 8999999999996
No 11
>KOG4231 consensus Intracellular membrane-bound Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=100.00 E-value=6.9e-37 Score=260.69 Aligned_cols=188 Identities=25% Similarity=0.391 Sum_probs=156.6
Q ss_pred CCCCCCeEEEEEeeCCchhhHHHHHHHHHHHHHhhhcCCCCCccccccceeeecCHHHHHHHHhcCCCCCCCccccHHHH
Q 027230 5 TIAKGKKITVLSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDI 84 (226)
Q Consensus 5 ~~~~~~~~~iL~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~ 84 (226)
.|.+++++|||++||||.||++.+.+|+.|++.-++ ++++.||+|||+|+|||+|++|+... |+.+||
T Consensus 410 ~~vkg~G~rILSiDGGGtrG~~~lqiL~kieklsgK------pIheLFD~ICGvSTG~ilA~~Lg~k~------m~l~eC 477 (763)
T KOG4231|consen 410 RQVKGQGLRILSIDGGGTRGLATLQILKKIEKLSGK------PIHELFDLICGVSTGGILAIALGVKL------MTLEEC 477 (763)
T ss_pred cccCCCceEEEEecCCCccchhHHHHHHHHHHhcCC------cHHHHHHHHhccCchHHHHHHHHhcC------ccHHHH
Confidence 356889999999999999999999999999885433 78999999999999999999999875 999999
Q ss_pred HHHHHhhCCCCcCCCccCCchhHHHHhhhccccccCCChHHHHHHHHHHhcccc-hhhhc-----CceEEEEeecC---C
Q 027230 85 NNFYFEHCPKIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDIT-IKDTL-----TNLIIPTFDIK---R 155 (226)
Q Consensus 85 ~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-l~~~~-----~~l~v~a~~~~---~ 155 (226)
.+.|.+++..+|+..... + +.-..|.++.|+++.++++|++.+|+.- |-.+. .+++|++|=++ |
T Consensus 478 eEiY~~lgk~vFsq~v~~----g---~~~~sw~Hs~y~~n~we~iLKem~ged~~mi~tsr~~~~PkvavVStiVn~~pT 550 (763)
T KOG4231|consen 478 EEIYKNLGKLVFSQSVPK----G---NEAASWIHSKYSANEWERILKEMCGEDGDMIITSRVKNVPKVAVVSTIVNVMPT 550 (763)
T ss_pred HHHHHHHhHHHhhccccc----c---chhheehhhhcchHHHHHHHHHHhhhhhhHHHhhccCCCCceeehhhhhhcCCC
Confidence 999999999999986532 1 1122456789999999999999999643 44332 36788777544 6
Q ss_pred CcceEeeccchhhhhcC------CCCCchHHHHHhHhccCCCCCCceeeeccCCCCCCcccceeeecccccCCCC
Q 027230 156 LQPVIFSSNDALQVKKG------ALKNARLADICVGTSAAPTYLPAHHFVTKDSTTGDTCSFDLIDGGVAANDPV 224 (226)
Q Consensus 156 ~~~~~f~~~~~~~~~~~------~~~~~~l~~a~~ASsA~P~~F~p~~i~~~~~~~g~~~~~~~iDGGv~~N~P~ 224 (226)
.+|++|+| |+.+.. ..++..+|+|+|||+|+|+||..+.+++. .+.|||+++|||+
T Consensus 551 ~qpfIFRN---Y~hp~G~~Shy~Ggc~h~~WqAIrASsAAP~Yf~e~~lgn~----------l~QDGgi~aNNPt 612 (763)
T KOG4231|consen 551 AQPFIFRN---YQHPVGTQSHYMGGCKHQVWQAIRASSAAPYYFDEFSLGNY----------LWQDGGIVANNPT 612 (763)
T ss_pred ccceeeec---cCCCCCcchhhcccchHHHHHHHHhcccCCcchhhhccccc----------eeccCcEeecCcc
Confidence 79999999 765432 24567899999999999999999999854 7999999999997
No 12
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=100.00 E-value=1.4e-35 Score=238.57 Aligned_cols=158 Identities=20% Similarity=0.258 Sum_probs=134.0
Q ss_pred EEEeeCCchhhHHHHHHHHHHHHHhhhcCCCCCccccccceeeecCHHHHHHHHhcCCCCCCCccccHHHHHHHHHhhCC
Q 027230 14 VLSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFEHCP 93 (226)
Q Consensus 14 iL~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~~~~ 93 (226)
.|+|+|||+||++|+|||++|+|+ ...+|.|+|||+|||+|++++++ ++.+++.+.+.+...
T Consensus 2 ~LvL~GGG~rG~~~~GvL~aL~e~-----------gi~~~~i~GtSaGAi~aa~~a~g-------~~~~~~~~~~~~~~~ 63 (221)
T cd07210 2 ALVLSSGFFGFYAHLGFLAALLEM-----------GLEPSAISGTSAGALVGGLFASG-------ISPDEMAELLLSLER 63 (221)
T ss_pred eEEEcChHHHHHHHHHHHHHHHHc-----------CCCceEEEEeCHHHHHHHHHHcC-------CCHHHHHHHHHhcCH
Confidence 599999999999999999999884 24589999999999999999998 678888888766532
Q ss_pred CCcCCCccCCchhHHHHhhhccccccCCChHHHHHHHHHHhcccchhhhcCceEEEEeecCCCcceEeeccchhhhhcCC
Q 027230 94 KIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDITIKDTLTNLIIPTFDIKRLQPVIFSSNDALQVKKGA 173 (226)
Q Consensus 94 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~~~~~~l~v~a~~~~~~~~~~f~~~~~~~~~~~~ 173 (226)
+.|-. + . ......+.|+.+.+++.+++.++..++.++..++.|++||+.++++++|++
T Consensus 64 ~~~~~------~----~--~~~~~~g~~~~~~l~~~l~~~l~~~~~~~~~~~l~i~atdl~tg~~~~f~~---------- 121 (221)
T cd07210 64 KDFWM------F----W--DPPLRGGLLSGDRFAALLREHLPPDRFEELRIPLAVSVVDLTSRETLLLSE---------- 121 (221)
T ss_pred HHHhh------h----c--cccCCccccChHHHHHHHHHHcCCCCHHHCCCCeEEEEEECCCCCEEEECC----------
Confidence 21100 0 0 012245689999999999999999999999999999999999999999987
Q ss_pred CCCchHHHHHhHhccCCCCCCceeeeccCCCCCCcccceeeecccccCCCC
Q 027230 174 LKNARLADICVGTSAAPTYLPAHHFVTKDSTTGDTCSFDLIDGGVAANDPV 224 (226)
Q Consensus 174 ~~~~~l~~a~~ASsA~P~~F~p~~i~~~~~~~g~~~~~~~iDGGv~~N~P~ 224 (226)
..+++|++||||+|++|+|+.+++. .|+|||+.+|+|+
T Consensus 122 ---~~l~~av~AS~aiP~~f~Pv~i~g~----------~~vDGGv~~n~Pi 159 (221)
T cd07210 122 ---GDLAEAVAASCAVPPLFQPVEIGGR----------PFVDGGVADRLPF 159 (221)
T ss_pred ---CCHHHHHHHHcccccccCCEEECCE----------EEEeccccccccH
Confidence 2589999999999999999999754 8999999999996
No 13
>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=100.00 E-value=1.1e-35 Score=245.10 Aligned_cols=146 Identities=43% Similarity=0.739 Sum_probs=123.7
Q ss_pred EEEeeCCchhhHHHHHHHHHHHHHhhhcCCCCCccccccceeeecCHHHHHHHHhcCCCCCCCccccHHHHHHHHHhhCC
Q 027230 14 VLSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFEHCP 93 (226)
Q Consensus 14 iL~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~~~~ 93 (226)
||||||||+||++++++|++||++++. ..++.++||+|+|||+|||+|++++.+. ++++++.++|.+...
T Consensus 1 iLsldGGG~rG~~~~~~L~~le~~~~~----~~~~~~~fd~i~GtS~G~iia~~l~~~~------~~~~~~~~~~~~~~~ 70 (258)
T cd07199 1 ILSLDGGGIRGIIPAEILAELEKRLGK----PSRIADLFDLIAGTSTGGIIALGLALGR------YSAEELVELYEELGR 70 (258)
T ss_pred CEEECCchHhHHHHHHHHHHHHHHhCC----CCchhhccceeeeccHHHHHHHHHhcCC------CCHHHHHHHHHHHhH
Confidence 699999999999999999999998753 1137899999999999999999999874 789999999988655
Q ss_pred CCcCCCccCCchhHHHHhhhccccccCCChHHHHHHHHHHhcccchhhhcCceEEEEeecCCCcceEeeccchhhhhc-C
Q 027230 94 KIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDITIKDTLTNLIIPTFDIKRLQPVIFSSNDALQVKK-G 172 (226)
Q Consensus 94 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~~~~~~l~v~a~~~~~~~~~~f~~~~~~~~~~-~ 172 (226)
++|. +++|+++|++++++++|++ |.... .
T Consensus 71 ~if~-----------------------------------------------~~~i~a~~~~~~~~~~f~~---~~~~~~~ 100 (258)
T cd07199 71 KIFP-----------------------------------------------RVLVTAYDLSTGKPVVFSN---YDAEEPD 100 (258)
T ss_pred hhcc-----------------------------------------------CeEEEEEEcCCCCeEEEEC---CCCcccC
Confidence 4431 7999999999999999999 76543 3
Q ss_pred CCCCchHHHHHhHhccCCCCCCceeeeccCCCCCCcccceeeecccccCCCCC
Q 027230 173 ALKNARLADICVGTSAAPTYLPAHHFVTKDSTTGDTCSFDLIDGGVAANDPVI 225 (226)
Q Consensus 173 ~~~~~~l~~a~~ASsA~P~~F~p~~i~~~~~~~g~~~~~~~iDGGv~~N~P~l 225 (226)
+..+.++|+|++||||+|+||||+.+.... ....|+|||+.+|||++
T Consensus 101 ~~~~~~l~d~~~ASsAaP~~f~p~~i~~~~------~~~~~vDGGv~~NnP~~ 147 (258)
T cd07199 101 DDDDFKLWDVARATSAAPTYFPPAVIESGG------DEGAFVDGGVAANNPAL 147 (258)
T ss_pred CcCCccHHHHHHHHhcchhccCcEEeccCC------CeeEEecCccccCChHH
Confidence 456789999999999999999999984210 12489999999999974
No 14
>COG3621 Patatin [General function prediction only]
Probab=100.00 E-value=4e-35 Score=238.58 Aligned_cols=196 Identities=31% Similarity=0.571 Sum_probs=154.1
Q ss_pred eEEEEEeeCCchhhHHHHHHHHHHHHHhhhcCCCCCccccccceeeecCHHHHHHHHhcCCCCCCCccccHHHHHHHHHh
Q 027230 11 KITVLSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFE 90 (226)
Q Consensus 11 ~~~iL~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~ 90 (226)
++|+|+|||||+||..++.+|+.|++.- |+ +++++||+++|||+|||++++|+.++ +..|....|.+
T Consensus 8 k~rIlsldGGGvrG~i~lE~lr~ieqiq----Gk--kl~e~FDl~~GTSiGgilal~La~~k-------s~~e~~qlF~~ 74 (394)
T COG3621 8 KYRILSLDGGGVRGAILLEKLRIIEQIQ----GK--KLCEYFDLIGGTSIGGILALGLALGK-------SPRELKQLFSA 74 (394)
T ss_pred ceeEEEecCCccccHHHHHHHHHHHHHh----CC--cceeeEeeecCccHHHHHHHHHhcCC-------CCchHHHHHHH
Confidence 6899999999999999999999988732 33 78999999999999999999999994 56778888887
Q ss_pred hCCCCcCCCccC-CchhHHHHhhhc-cccccCCChHHHHHHHHHHhcccchhhhcCceEEEEeecCCCc-ceEeeccchh
Q 027230 91 HCPKIFPQLSRG-GNFLRSIISSLS-KWVRPMYDGKYIRSLTKEILEDITIKDTLTNLIIPTFDIKRLQ-PVIFSSNDAL 167 (226)
Q Consensus 91 ~~~~~f~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~l~~~~~~l~v~a~~~~~~~-~~~f~~~~~~ 167 (226)
...++|+..+.. -...+.+.+.+. .++.++|+.++|.+.|+.++++.++.|+.++++|+.+++++.+ |..|.+. .
T Consensus 75 q~~q~f~ee~~~~~fpv~tFrq~l~~a~~~pkys~~pLiK~lk~~~~D~tlkDL~~~Vvv~~~~l~~~knp~~t~~~--~ 152 (394)
T COG3621 75 QQAQIFPEEMKHRIFPVGTFRQLLSYALFSPKYSPQPLIKLLKFVCKDYTLKDLIGRVVVPGYDLNNQKNPLFTFST--H 152 (394)
T ss_pred hhhhhccHhhccCCCcchhHhhhhhhhhcCCcCCchhHHHHHHHhccccchhhhccceEEEeeecccccCCceeecc--c
Confidence 777777654211 011222222222 3578899999999999999999999999999999999999988 5544441 2
Q ss_pred hhhcCCCCCchHHHHHhHhccCCCCCCceeeeccCCCCCCcccceeeecccccCCCCC
Q 027230 168 QVKKGALKNARLADICVGTSAAPTYLPAHHFVTKDSTTGDTCSFDLIDGGVAANDPVI 225 (226)
Q Consensus 168 ~~~~~~~~~~~l~~a~~ASsA~P~~F~p~~i~~~~~~~g~~~~~~~iDGGv~~N~P~l 225 (226)
+...+...++.|||++.||+|+|+||||++..+.+ +++...+|||||++|||++
T Consensus 153 ~~~~~ry~~~~LsDii~~stAAPtyFp~h~~~~i~----~~k~~~~iDGGv~ANnPsl 206 (394)
T COG3621 153 HARPSRYNNYKLSDIILASTAAPTYFPPHHFENIT----NTKYHPIIDGGVVANNPSL 206 (394)
T ss_pred CccccccccchHHHHHHhcccCCcccCcccccccc----cccceeeecceeeecChhH
Confidence 22223366899999999999999999999986653 2344579999999999985
No 15
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=100.00 E-value=1.1e-34 Score=243.26 Aligned_cols=166 Identities=22% Similarity=0.311 Sum_probs=132.9
Q ss_pred EEEEEeeCCchhhHHHHHHHHHHHHHhhhcCCCCCccccccceeeecCHHHHHHHHhcCCCCCCCccccHHHHHHHHHhh
Q 027230 12 ITVLSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFEH 91 (226)
Q Consensus 12 ~~iL~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~~ 91 (226)
...|||+|||+||++|+|||++|+|+ ...||+|+|||+||++|++++++ ++++++.+...+.
T Consensus 15 ~~gLvL~GGG~RG~ahiGvL~aLee~-----------gi~~d~v~GtSaGAi~ga~ya~g-------~~~~~~~~~~~~~ 76 (306)
T cd07225 15 SIALVLGGGGARGCAHIGVIKALEEA-----------GIPVDMVGGTSIGAFIGALYAEE-------RNISRMKQRAREW 76 (306)
T ss_pred CEEEEECChHHHHHHHHHHHHHHHHc-----------CCCCCEEEEECHHHHHHHHHHcC-------CCHHHHHHHHHHH
Confidence 46899999999999999999999985 45699999999999999999998 6677766655443
Q ss_pred CCCCcCCCccCCchhHHHHhhhccccccCCChHHHHHHHHHHhcccchhhhcCceEEEEeecCCCcceEeeccchhhhhc
Q 027230 92 CPKIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDITIKDTLTNLIIPTFDIKRLQPVIFSSNDALQVKK 171 (226)
Q Consensus 92 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~~~~~~l~v~a~~~~~~~~~~f~~~~~~~~~~ 171 (226)
... +. .++..+.. +.....+.|+.+.+++.|++.+++.+++|+..++.+++||+.++++++|++
T Consensus 77 ~~~-~~------~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~edl~~p~~~vatdl~tg~~~~~~~-------- 140 (306)
T cd07225 77 AKD-MT------SIWKKLLD-LTYPITSMFSGAAFNRSIHSIFGDKQIEDLWLPYFTITTDITASAMRVHTD-------- 140 (306)
T ss_pred HHH-hH------HHHHHHhc-ccccccccCChHHHHHHHHHHhCCCCHHHcCCCeEEEeeecCCCCEEEecC--------
Confidence 111 00 01111111 112245679999999999999999999999999999999999999999877
Q ss_pred CCCCCchHHHHHhHhccCCCCCCceeeeccCCCCCCcccceeeecccccCCCC
Q 027230 172 GALKNARLADICVGTSAAPTYLPAHHFVTKDSTTGDTCSFDLIDGGVAANDPV 224 (226)
Q Consensus 172 ~~~~~~~l~~a~~ASsA~P~~F~p~~i~~~~~~~g~~~~~~~iDGGv~~N~P~ 224 (226)
..+++|++||||+|++|||+.+... | ..|+|||+.+|+|+
T Consensus 141 -----g~l~~avrAS~siP~~f~Pv~~~~~----g----~~~vDGGv~~n~Pv 180 (306)
T cd07225 141 -----GSLWRYVRASMSLSGYLPPLCDPKD----G----HLLMDGGYINNLPA 180 (306)
T ss_pred -----CCHHHHHHHHhcCCeeccceEeCCC----C----eEEEeccccCcchH
Confidence 3699999999999999999963211 2 38999999999996
No 16
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=100.00 E-value=2.7e-33 Score=230.28 Aligned_cols=164 Identities=21% Similarity=0.198 Sum_probs=127.0
Q ss_pred EEEEEeeCCchhhHHHHHHHHHHHHHhhhcCCCCCccccccceeeecCHHHHHHHHhcCCCCCCCccccHHHHHHHHHhh
Q 027230 12 ITVLSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFEH 91 (226)
Q Consensus 12 ~~iL~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~~ 91 (226)
...|||+|||+||++|+|||++|+|+ ...||+|+|||+||++|++++++ ++..++.+...+.
T Consensus 10 ~igLVL~GGGaRG~ahiGVL~aLeE~-----------gi~~d~v~GtSaGAiiga~ya~g-------~~~~~~~~r~~~~ 71 (269)
T cd07227 10 AIGLVLGGGGARGISHIGILQALEEA-----------GIPIDAIGGTSIGSFVGGLYARE-------ADLVPIFGRAKKF 71 (269)
T ss_pred CEEEEECCcHHHHHHHHHHHHHHHHc-----------CCCccEEEEECHHHHHHHHHHcC-------CchHHHHHHHHHH
Confidence 46799999999999999999999884 45699999999999999999998 5566654332221
Q ss_pred CCCCcCCCccCCchhHHHHhhhccccccCCChHHHHHHHHHHhcccchhhhcCceEEEEeecCCCcceEeeccchhhhhc
Q 027230 92 CPKIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDITIKDTLTNLIIPTFDIKRLQPVIFSSNDALQVKK 171 (226)
Q Consensus 92 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~~~~~~l~v~a~~~~~~~~~~f~~~~~~~~~~ 171 (226)
..+.++ ++..+.. +.....+.++...+.+.|.+.+++..++|...++++++||+.++++++|++
T Consensus 72 ~~~~~~-------~~~~l~d-~~~p~~~~~~g~~~~~~l~~~~~~~~iedl~~pf~~~aTdl~tg~~~~~~~-------- 135 (269)
T cd07227 72 AGRMAS-------MWRFLSD-VTYPFASYTTGHEFNRGIWKTFGNTHIEDFWIPFYANSTNITHSRMEIHSS-------- 135 (269)
T ss_pred HHHHhH-------HHHHHhh-cccccccccchhHHHHHHHHHcCcCCHHHCCCCEEEEEEECCCCCEEEecC--------
Confidence 111100 0110000 001112334556777788999999999999999999999999999999987
Q ss_pred CCCCCchHHHHHhHhccCCCCCCceeeeccCCCCCCcccceeeecccccCCCC
Q 027230 172 GALKNARLADICVGTSAAPTYLPAHHFVTKDSTTGDTCSFDLIDGGVAANDPV 224 (226)
Q Consensus 172 ~~~~~~~l~~a~~ASsA~P~~F~p~~i~~~~~~~g~~~~~~~iDGGv~~N~P~ 224 (226)
..+|+|++||||+|++|||+.+++. .|+|||+.+|.|+
T Consensus 136 -----g~l~~avrAS~slPg~~pPv~~~G~----------~~vDGGv~dnlPv 173 (269)
T cd07227 136 -----GYAWRYIRASMSLAGLLPPLSDNGS----------MLLDGGYMDNLPV 173 (269)
T ss_pred -----CCHHHHHHHHccchhcCCCEEECCE----------EEEcccCCccHhH
Confidence 3599999999999999999998754 8999999999996
No 17
>PRK10279 hypothetical protein; Provisional
Probab=100.00 E-value=1e-32 Score=230.29 Aligned_cols=160 Identities=19% Similarity=0.259 Sum_probs=128.7
Q ss_pred EEEEEeeCCchhhHHHHHHHHHHHHHhhhcCCCCCccccccceeeecCHHHHHHHHhcCCCCCCCccccHHHHHHHHHhh
Q 027230 12 ITVLSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFEH 91 (226)
Q Consensus 12 ~~iL~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~~ 91 (226)
...|+|+|||+||++|+|||++|+|. ...||+|+|||+||++|++++++. ..++.+++...
T Consensus 5 ~igLvL~GGGarG~ahiGVL~aL~E~-----------gi~~d~i~GtS~GAlvga~yA~g~--------~~~l~~~~~~~ 65 (300)
T PRK10279 5 KIGLALGSGAARGWSHIGVINALKKV-----------GIEIDIVAGCSIGSLVGAAYACDR--------LSALEDWVTSF 65 (300)
T ss_pred cEEEEEcCcHHHHHHHHHHHHHHHHc-----------CCCcCEEEEEcHHHHHHHHHHcCC--------hHHHHHHHhcc
Confidence 46799999999999999999999984 456999999999999999999883 23444443221
Q ss_pred CCCCcCCCccCCchhHHHHhhhccccccCCChHHHHHHHHHHhcccchhhhcCceEEEEeecCCCcceEeeccchhhhhc
Q 027230 92 CPKIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDITIKDTLTNLIIPTFDIKRLQPVIFSSNDALQVKK 171 (226)
Q Consensus 92 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~~~~~~l~v~a~~~~~~~~~~f~~~~~~~~~~ 171 (226)
. |. ..+. +.. +.....+.++.+++.+.+++.++..+++++..++.++|||+.++++++|+.
T Consensus 66 ~---~~------~~~~-~~d-~~~~~~gl~~~~~~~~~l~~~~~~~~~e~l~~~~~ivAtdl~tg~~v~~~~-------- 126 (300)
T PRK10279 66 S---YW------DVLR-LMD-LSWQRGGLLRGERVFNQYREIMPETEIENCSRRFGAVATNLSTGRELWFTE-------- 126 (300)
T ss_pred c---hh------hhhh-hhc-cCCCcCcccCcHHHHHHHHHHcChhhHHhCCCCEEEEEEECCCCCEEEecC--------
Confidence 1 00 0100 000 001134678899999999999999999999999999999999999999987
Q ss_pred CCCCCchHHHHHhHhccCCCCCCceeeeccCCCCCCcccceeeecccccCCCC
Q 027230 172 GALKNARLADICVGTSAAPTYLPAHHFVTKDSTTGDTCSFDLIDGGVAANDPV 224 (226)
Q Consensus 172 ~~~~~~~l~~a~~ASsA~P~~F~p~~i~~~~~~~g~~~~~~~iDGGv~~N~P~ 224 (226)
..+++|++||||+|++|+|+.+++. .|+|||+.+|.|+
T Consensus 127 -----g~l~~avrAS~aiP~vf~Pv~~~g~----------~~vDGGv~~~~Pv 164 (300)
T PRK10279 127 -----GDLHLAIRASCSMPGLMAPVAHNGY----------WLVDGAVVNPVPV 164 (300)
T ss_pred -----CCHHHHHHHhcccccCCCCEEECCE----------EEEECccCccccH
Confidence 3588999999999999999999754 8999999999996
No 18
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=100.00 E-value=1.5e-32 Score=220.55 Aligned_cols=147 Identities=24% Similarity=0.421 Sum_probs=119.1
Q ss_pred EEeeCCchhhHHHHHHHHHHHHHhhhcCCCCCccccccceeeecCHHHHHHHHhcCCCCCCCccccHHHHHHHHHhhCCC
Q 027230 15 LSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFEHCPK 94 (226)
Q Consensus 15 L~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~~~~~ 94 (226)
|+|+|||+||+||+|||++|+|+ ...||+|+|||+||++|++++++... ..+++.++|.++...
T Consensus 1 LvL~GGG~rG~~~~Gvl~aL~e~-----------g~~~d~i~GtS~GAl~aa~~a~~~~~-----~~~~l~~~~~~~~~~ 64 (215)
T cd07209 1 LVLSGGGALGAYQAGVLKALAEA-----------GIEPDIISGTSIGAINGALIAGGDPE-----AVERLEKLWRELSRE 64 (215)
T ss_pred CEecccHHHHHHHHHHHHHHHHc-----------CCCCCEEEEECHHHHHHHHHHcCCcH-----HHHHHHHHHHhCChh
Confidence 79999999999999999999985 34799999999999999999998310 267788887764221
Q ss_pred CcCCCccCCchhHHHHhhhccccccCCChHHHHHHHHHHhcccchhhhcC---ceEEEEeecCCCcceEeeccchhhhhc
Q 027230 95 IFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDITIKDTLT---NLIIPTFDIKRLQPVIFSSNDALQVKK 171 (226)
Q Consensus 95 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~~~~~---~l~v~a~~~~~~~~~~f~~~~~~~~~~ 171 (226)
- + + +++++++.+...++.+... ++.|++||+.++++++|++ ..
T Consensus 65 ~---------~-------~------------l~~~~~~~~~~~~~~~~~~~~~~l~i~at~~~tg~~~~f~~---~~--- 110 (215)
T cd07209 65 D---------V-------F------------LRGLLDRALDFDTLRLLAILFAGLVIVAVNVLTGEPVYFDD---IP--- 110 (215)
T ss_pred h---------H-------H------------HHHHHHHhCCHHHHhhccccCceEEEEEEEcCCCCEEEEeC---CC---
Confidence 0 0 0 6666677776666666554 5999999999999999998 22
Q ss_pred CCCCCchHHHHHhHhccCCCCCCceeeeccCCCCCCcccceeeecccccCCCCC
Q 027230 172 GALKNARLADICVGTSAAPTYLPAHHFVTKDSTTGDTCSFDLIDGGVAANDPVI 225 (226)
Q Consensus 172 ~~~~~~~l~~a~~ASsA~P~~F~p~~i~~~~~~~g~~~~~~~iDGGv~~N~P~l 225 (226)
...+++|++||||+|++|||+.+++. .|+|||+.+|+|+.
T Consensus 111 ----~~~~~~av~AS~aiP~~f~pv~i~g~----------~yvDGGv~~n~Pv~ 150 (215)
T cd07209 111 ----DGILPEHLLASAALPPFFPPVEIDGR----------YYWDGGVVDNTPLS 150 (215)
T ss_pred ----cchHHHHHHHhccccccCCCEEECCe----------EEEcCccccCcCHH
Confidence 24799999999999999999999754 89999999999973
No 19
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=99.97 E-value=1.3e-31 Score=208.11 Aligned_cols=157 Identities=23% Similarity=0.280 Sum_probs=115.7
Q ss_pred EEeeCCchhhHHHHHHHHHHHHHhhhcCCCCCccccccceeeecCHHHHHHHHhcCCCCCCCccccHHHHHHHHHhhC--
Q 027230 15 LSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFEHC-- 92 (226)
Q Consensus 15 L~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~~~-- 92 (226)
|+|+|||+||+||+|||++|+|+ ...||+|+|||+||++|++++++ .+.+++..+..+..
T Consensus 1 Lvl~GGG~rG~~~~Gvl~aL~e~-----------gi~~d~v~GtSaGAi~aa~~a~g-------~~~~~~~~~~~~~~~~ 62 (172)
T cd07198 1 LVLSGGGALGIYHVGVAKALRER-----------GPLIDIIAGTSAGAIVAALLASG-------RDLEEALLLLLRLSRE 62 (172)
T ss_pred CEECCcHHHHHHHHHHHHHHHHc-----------CCCCCEEEEECHHHHHHHHHHcC-------CCHHHHHHHHHHHHHH
Confidence 79999999999999999999985 24499999999999999999998 45666655442211
Q ss_pred -CCCcCCCccCCchhHHHHhhhccccccCCChHHHHHHHHHHhcccchhhhcCceEEEEeecCCCcceEeeccchhhhhc
Q 027230 93 -PKIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDITIKDTLTNLIIPTFDIKRLQPVIFSSNDALQVKK 171 (226)
Q Consensus 93 -~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~~~~~~l~v~a~~~~~~~~~~f~~~~~~~~~~ 171 (226)
+..+... ......+....++..++ .+....+++...++.|++||+.++++++|+.
T Consensus 63 ~~~~~~~~---------------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~at~l~tg~~~~~~~-------- 118 (172)
T cd07198 63 VRLRFDGA---------------FPPTGRLLGILRQPLLS-ALPDDAHEDASGKLFISLTRLTDGENVLVSD-------- 118 (172)
T ss_pred HHHhccCC---------------cCcccchhHHHHHHHHH-hccHhHHHHCCCCEEEEEEECCCCCEEEEeC--------
Confidence 1111100 00111122222333332 3345567788899999999999999999864
Q ss_pred CCCCCchHHHHHhHhccCCCCCCceee--eccCCCCCCcccceeeecccccCCCCC
Q 027230 172 GALKNARLADICVGTSAAPTYLPAHHF--VTKDSTTGDTCSFDLIDGGVAANDPVI 225 (226)
Q Consensus 172 ~~~~~~~l~~a~~ASsA~P~~F~p~~i--~~~~~~~g~~~~~~~iDGGv~~N~P~l 225 (226)
..+..+++|++||||+|++|+|+.+ ++. .|+|||+.+|+|+.
T Consensus 119 --~~~~~l~~av~AS~aiP~~f~p~~~~~~g~----------~~vDGGv~~n~Pv~ 162 (172)
T cd07198 119 --TSKGELWSAVRASSSIPGYFGPVPLSFRGR----------RYGDGGLSNNLPVA 162 (172)
T ss_pred --CCcchHHHHHHHHcchhhhcCceeecCCCe----------EEEeCCcccCCCCc
Confidence 1246799999999999999999998 643 89999999999975
No 20
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=99.97 E-value=7.2e-32 Score=223.37 Aligned_cols=161 Identities=19% Similarity=0.298 Sum_probs=121.7
Q ss_pred EEeeCCchhhHHHHHHHHHHHHHhhhcCCCCCccccccceeeecCHHHHHHHHhcCCCCCCCccccHHHHHHHHHhhCC-
Q 027230 15 LSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFEHCP- 93 (226)
Q Consensus 15 L~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~~~~- 93 (226)
|+|+|||+||+|++|||++|++. .+. .||+|+|||+||++|++++++. +.++ .+.+.+...
T Consensus 1 Lvl~GGG~rG~~~~Gvl~al~e~---------~~~-~fd~i~GtSaGAi~a~~~~~g~-------~~~~-~~~~~~~~~~ 62 (266)
T cd07208 1 LVLEGGGMRGAYTAGVLDAFLEA---------GIR-PFDLVIGVSAGALNAASYLSGQ-------RGRA-LRINTKYATD 62 (266)
T ss_pred CeeccchhhHHHHHHHHHHHHHc---------CCC-CCCEEEEECHHHHhHHHHHhCC-------cchH-HHHHHHhcCC
Confidence 79999999999999999999985 122 5999999999999999999884 2222 233333221
Q ss_pred CCcCCCccCCchhHHHHhhhccccccCCChHHHHHHH---HHHhcccchhhhcCceEEEEeecCCCcceEeeccchhhhh
Q 027230 94 KIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLT---KEILEDITIKDTLTNLIIPTFDIKRLQPVIFSSNDALQVK 170 (226)
Q Consensus 94 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l---~~~~~~~~l~~~~~~l~v~a~~~~~~~~~~f~~~~~~~~~ 170 (226)
+.|- ++ .++++ .++.++.+.+.+.+ ...++..++.+...++.|++||++++++++|++ ...
T Consensus 63 ~~~~------~~----~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~at~~~~g~~~~~~~---~~~- 126 (266)
T cd07208 63 PRYL------GL----RSLLR--TGNLFDLDFLYDELPDGLDPFDFEAFAASPARFYVVATDADTGEAVYFDK---PDI- 126 (266)
T ss_pred CCcc------CH----HHHhc--CCCeecHHHHHhhccCccCCcCHHHHHhCCCcEEEEEEECCCCCEEEEeC---cCc-
Confidence 1111 01 11221 24567777777765 334556678888889999999999999999998 321
Q ss_pred cCCCCCchHHHHHhHhccCCCCCCceeeeccCCCCCCcccceeeecccccCCCC
Q 027230 171 KGALKNARLADICVGTSAAPTYLPAHHFVTKDSTTGDTCSFDLIDGGVAANDPV 224 (226)
Q Consensus 171 ~~~~~~~~l~~a~~ASsA~P~~F~p~~i~~~~~~~g~~~~~~~iDGGv~~N~P~ 224 (226)
+..+++|++||||+|++|||+.+++. .|+|||+.+|+|+
T Consensus 127 -----~~~l~~av~AS~aiP~~f~pv~i~g~----------~yvDGGv~~~~P~ 165 (266)
T cd07208 127 -----LDDLLDALRASSALPGLFPPVRIDGE----------PYVDGGLSDSIPV 165 (266)
T ss_pred -----chHHHHHHHHHhcchhhcCCEEECCE----------EEEcCccCcchhH
Confidence 35699999999999999999999754 8999999999996
No 21
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=99.97 E-value=2.3e-30 Score=210.84 Aligned_cols=163 Identities=18% Similarity=0.252 Sum_probs=127.2
Q ss_pred EEeeCCchhhHHHHHHHHHHHHHhhhcCCCCCccccccceeeecCHHHHHHHHhcCCCCCCCccccHHHHHHHHHhhCCC
Q 027230 15 LSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFEHCPK 94 (226)
Q Consensus 15 L~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~~~~~ 94 (226)
|||+|||+||+||+||+++|+|+ .+...+|.|+|||+||++|++++++ .+++++.+.+.+...+
T Consensus 3 LsfsGGG~rG~yh~GVl~aL~e~---------g~~~~~d~i~GtSAGAl~aa~~a~g-------~~~~~~~~~~~~~~~~ 66 (245)
T cd07218 3 LSFAGCGFLGIYHVGVAVCLKKY---------APHLLLNKISGASAGALAACCLLCD-------LPLGEMTSDFLRVVRE 66 (245)
T ss_pred EEEeCcHHHHHHHHHHHHHHHHh---------CcccCCCeEEEEcHHHHHHHHHHhC-------CcHHHHHHHHHHHHHH
Confidence 89999999999999999999986 2334579999999999999999998 4566766655554332
Q ss_pred CcCCCccCCchhHHHHhhhccccccCCC-hHHHHHHHHHHhcccchhhhcCceEEEEeecCCCcceEeeccchhhhhcCC
Q 027230 95 IFPQLSRGGNFLRSIISSLSKWVRPMYD-GKYIRSLTKEILEDITIKDTLTNLIIPTFDIKRLQPVIFSSNDALQVKKGA 173 (226)
Q Consensus 95 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~l~~~~~~~~l~~~~~~l~v~a~~~~~~~~~~f~~~~~~~~~~~~ 173 (226)
..... ++.+ .+.|+ .+.+++.+++.+.+....+...++.|++|++.+++.++|++ ++.
T Consensus 67 ~~~~~-------------lg~~-~p~~~l~~~l~~~l~~~lp~d~~~~~~~~L~i~~T~l~~g~~~~~s~---f~s---- 125 (245)
T cd07218 67 ARRHS-------------LGPF-SPSFNIQTCLLEGLQKFLPDDAHERVSGRLHISLTRVSDGKNVIVSE---FES---- 125 (245)
T ss_pred HHHhc-------------ccCC-ccccCHHHHHHHHHHHHCCcchHHhCCCCEEEEEEECCCCCeEEEec---CCC----
Confidence 21100 1111 13344 57788889999988878888889999999999999999998 543
Q ss_pred CCCchHHHHHhHhccCCCCC--CceeeeccCCCCCCcccceeeecccccCCCCCC
Q 027230 174 LKNARLADICVGTSAAPTYL--PAHHFVTKDSTTGDTCSFDLIDGGVAANDPVIN 226 (226)
Q Consensus 174 ~~~~~l~~a~~ASsA~P~~F--~p~~i~~~~~~~g~~~~~~~iDGGv~~N~P~l~ 226 (226)
...+++|++|||++|+|+ .|+.+++. .|+|||+.+|.|+++
T Consensus 126 --~~dLi~al~AS~~IP~~~g~~P~~~~G~----------~~vDGGv~dnlP~~~ 168 (245)
T cd07218 126 --REELLQALLCSCFIPVFSGLLPPKFRGV----------RYMDGGFSDNLPTLD 168 (245)
T ss_pred --cchHHHHHHHhcCCCcccCCCCeEECCE----------EEEcCcccCCCCCCC
Confidence 247999999999999994 56666543 899999999999874
No 22
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=99.97 E-value=4.5e-30 Score=216.49 Aligned_cols=169 Identities=24% Similarity=0.333 Sum_probs=131.5
Q ss_pred eEEEEEeeCCchhhHHHHHHHHHHHHHhhhcCCCCCccccccceeeecCHHHHHHHHhcCCCCCCCccccHHHHHHHHHh
Q 027230 11 KITVLSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFE 90 (226)
Q Consensus 11 ~~~iL~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~ 90 (226)
+...|+|.|||+||++|+|||++|+|. ...||+|+|||+||++|++++++ ++.++...+-.+
T Consensus 10 ~~i~LvL~GGgArG~~hiGVl~aL~e~-----------gi~~~~iaGtS~GAiva~l~A~g-------~~~~~~~~~~~~ 71 (306)
T COG1752 10 LRIGLVLGGGGARGAAHIGVLKALEEA-----------GIPIDVIAGTSAGAIVAALYAAG-------MDEDELELAAQR 71 (306)
T ss_pred ceEEEEecCcHHHHHHHHHHHHHHHHc-----------CCCccEEEecCHHHHHHHHHHcC-------CChhHHHHHHHH
Confidence 347899999999999999999999984 47899999999999999999998 444454433333
Q ss_pred hCCCCcC-CCccCCchhHHHHhhhccccccCCChHHHHHHHHHHhccc--chhhhcCc-eEEEEeecCCCcceEeeccch
Q 027230 91 HCPKIFP-QLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDI--TIKDTLTN-LIIPTFDIKRLQPVIFSSNDA 166 (226)
Q Consensus 91 ~~~~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~--~l~~~~~~-l~v~a~~~~~~~~~~f~~~~~ 166 (226)
+...... ...+ .... . .+......+.++.+.+.+.+++.+++. .++++... +.|+++|+.+++.++|+.
T Consensus 72 l~~~~~~~~~~~--~~~d-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~atd~~~g~~~~~~~--- 144 (306)
T COG1752 72 LTARWDNARDLL--RLLD-L-TLPGGRPLGLLRGEKLRNLLRELLGDLLFDFEDLPIPLLYVVATDLLTGREVVFSE--- 144 (306)
T ss_pred HHhhhccccchh--hccc-h-hhhccCccceecHHHHHHHHHHHhcccccCHHHcCCCcEEEEeeEcCCCCEEEecC---
Confidence 2221110 0000 0000 0 000010236788999999999999999 99999999 999999999999999987
Q ss_pred hhhhcCCCCCchHHHHHhHhccCCCCCCceeeeccCCCCCCcccceeeecccccCCCC
Q 027230 167 LQVKKGALKNARLADICVGTSAAPTYLPAHHFVTKDSTTGDTCSFDLIDGGVAANDPV 224 (226)
Q Consensus 167 ~~~~~~~~~~~~l~~a~~ASsA~P~~F~p~~i~~~~~~~g~~~~~~~iDGGv~~N~P~ 224 (226)
..+|+|++||||+|++|||+.+++. .|+|||+.+|.|+
T Consensus 145 ----------g~~~~av~AS~siP~vF~Pv~i~~~----------~~vDGg~~~n~Pv 182 (306)
T COG1752 145 ----------GSLAEAVRASCSIPGVFPPVEIDGR----------LLVDGGVLNNVPV 182 (306)
T ss_pred ----------CcHHHHHHHhcccCccCCCEEECCE----------EEEecCccCCccH
Confidence 2399999999999999999999854 8999999999995
No 23
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=99.97 E-value=4.9e-30 Score=209.52 Aligned_cols=166 Identities=18% Similarity=0.235 Sum_probs=121.7
Q ss_pred EEeeCCchhhHHHHHHHHHHHHHhhhcCCCCCccccccceeeecCHHHHHHHHhcCCCCCCCccccHHHHHHHHHhhCCC
Q 027230 15 LSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFEHCPK 94 (226)
Q Consensus 15 L~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~~~~~ 94 (226)
|+|+|||+||+||+|||++|+|+- +++...||.|+|||+||++|++++.+. ...+++.+++....+.
T Consensus 2 L~l~GGG~rG~yhiGVl~~L~e~g-------~~l~~~~~~i~GtSaGAl~aa~~a~~~------~~~~~~~~~~~~~~~~ 68 (246)
T cd07222 2 LSFAACGFLGIYHLGAAKALLRHG-------KKLLKRVKRFAGASAGSLVAAVLLTAP------EKIEECKEFTYKFAEE 68 (246)
T ss_pred eeEcccHHHHHHHHHHHHHHHHcC-------chhhccCCEEEEECHHHHHHHHHhcCh------HHHHHHHHHHHHHHHH
Confidence 899999999999999999999851 234557999999999999999998542 2345554444332221
Q ss_pred CcCCCccCCchhHHHHhhhccccccCCChHHHHHHHHHHhcccchhhhcCceEEEEeecCCCcceEeeccchhhhhcCCC
Q 027230 95 IFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDITIKDTLTNLIIPTFDIKRLQPVIFSSNDALQVKKGAL 174 (226)
Q Consensus 95 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~~~~~~l~v~a~~~~~~~~~~f~~~~~~~~~~~~~ 174 (226)
..... +..+..+....+.+++.+++.++.........++.|++||+.+++.++|++ |..+
T Consensus 69 ~~~~~-------------~~~~~~~~~~~~~l~~~l~~~lp~~~~~~~~~~l~I~aTdl~tg~~v~~~~---f~s~---- 128 (246)
T cd07222 69 VRKQR-------------FGAMTPGYDFMARLRKGIESILPTDAHELANDRLHVSITNLKTRKNYLVSN---FTSR---- 128 (246)
T ss_pred HHhcc-------------cCCCCCcchHHHHHHHHHHHHCCHHHHhcCCCcEEEEEEECCCCCeEEEec---cCCc----
Confidence 11110 011111222356788888888886433333478999999999999999987 5432
Q ss_pred CCchHHHHHhHhccCCCC--CCceeeeccCCCCCCcccceeeecccccCCCCC
Q 027230 175 KNARLADICVGTSAAPTY--LPAHHFVTKDSTTGDTCSFDLIDGGVAANDPVI 225 (226)
Q Consensus 175 ~~~~l~~a~~ASsA~P~~--F~p~~i~~~~~~~g~~~~~~~iDGGv~~N~P~l 225 (226)
..+.+|++||||+|+| |+|+.+++. .|+|||+.+|.|+.
T Consensus 129 --~~L~~av~AS~aiP~~~g~~pv~~~G~----------~~vDGGv~~~~P~~ 169 (246)
T cd07222 129 --EDLIKVLLASCYVPVYAGLKPVEYKGQ----------KWIDGGFTNSLPVL 169 (246)
T ss_pred --chHHHHHHHhhcCccccCCCCeEECCE----------EEEecCccCCCCCC
Confidence 3589999999999998 599998754 89999999999975
No 24
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=99.97 E-value=1.4e-29 Score=206.42 Aligned_cols=164 Identities=23% Similarity=0.318 Sum_probs=124.2
Q ss_pred EEeeCCchhhHHHHHHHHHHHHHhhhcCCCCCccccccceeeecCHHHHHHHHhcCCCCCCCccccHHHHHHHHHhhCCC
Q 027230 15 LSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFEHCPK 94 (226)
Q Consensus 15 L~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~~~~~ 94 (226)
|||+|||+||+||+||+++|+|+- +.+...+|.|+|||+||++|++++++ .+.+++.+.+.+...+
T Consensus 2 LslsGGG~~G~yh~GVl~~L~e~g-------~~l~~~~~~i~GtSAGAl~aa~~a~g-------~~~~~~~~~~~~~~~~ 67 (243)
T cd07204 2 LSFSGCGFLGIYHVGVASALREHA-------PRLLQNARRIAGASAGAIVAAVVLCG-------VSMEEACSFILKVVSE 67 (243)
T ss_pred eeEcchHHHHHHHHHHHHHHHHcC-------cccccCCCEEEEEcHHHHHHHHHHhC-------CCHHHHHHHHHHHHhh
Confidence 899999999999999999998851 12223357999999999999999998 5677766655554332
Q ss_pred CcCCCccCCchhHHHHhhhccccccCCC-hHHHHHHHHHHhcccchhhhcCceEEEEeecCCCcceEeeccchhhhhcCC
Q 027230 95 IFPQLSRGGNFLRSIISSLSKWVRPMYD-GKYIRSLTKEILEDITIKDTLTNLIIPTFDIKRLQPVIFSSNDALQVKKGA 173 (226)
Q Consensus 95 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~l~~~~~~~~l~~~~~~l~v~a~~~~~~~~~~f~~~~~~~~~~~~ 173 (226)
.-... +..+ .+.++ .+.+++.+++.+.+....+...++.|++||+.++++++|+. |..+
T Consensus 68 ~~~~~-------------~g~~-~~~~~~~~~l~~~l~~~lp~~~~~~~~~~l~I~~T~l~~g~~~~~~~---f~s~--- 127 (243)
T cd07204 68 ARRRS-------------LGPL-HPSFNLLKILRQGLEKILPDDAHELASGRLHISLTRVSDGENVLVSE---FDSK--- 127 (243)
T ss_pred hhhhh-------------cCcc-cccchHHHHHHHHHHHHCChhHHHhcCCCEEEEEEECCCCCEEEEec---CCCc---
Confidence 21110 0000 11122 24577778888887777777789999999999999999987 5432
Q ss_pred CCCchHHHHHhHhccCCCC--CCceeeeccCCCCCCcccceeeecccccCCCCC
Q 027230 174 LKNARLADICVGTSAAPTY--LPAHHFVTKDSTTGDTCSFDLIDGGVAANDPVI 225 (226)
Q Consensus 174 ~~~~~l~~a~~ASsA~P~~--F~p~~i~~~~~~~g~~~~~~~iDGGv~~N~P~l 225 (226)
..+.+|++|||++|+| |.|+.+++. .|+|||+.+|.|+.
T Consensus 128 ---~~Li~Al~AS~~iP~~~g~~P~~~~G~----------~~vDGGv~~~lP~~ 168 (243)
T cd07204 128 ---EELIQALVCSCFIPFYCGLIPPKFRGV----------RYIDGGLSDNLPIL 168 (243)
T ss_pred ---hHHHHHHHHhccCCcccCCCCeEECCE----------EEEeCCcccCCCCC
Confidence 3688999999999999 478888754 89999999999976
No 25
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=99.97 E-value=2.1e-29 Score=205.85 Aligned_cols=166 Identities=19% Similarity=0.236 Sum_probs=125.6
Q ss_pred EEEeeCCchhhHHHHHHHHHHHHHhhhcCCCCCccccccceeeecCHHHHHHHHhcCCCCCCCccccHHHHHHHHHhhCC
Q 027230 14 VLSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFEHCP 93 (226)
Q Consensus 14 iL~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~~~~ 93 (226)
-|||+|||+||+||+||+++|+|+- +++...||.|+|||+||++|++++++ .+.+++.+.+.++..
T Consensus 2 ~Lsl~GGG~rG~yh~GVl~aL~e~~-------~~l~~~~~~i~GtSAGAl~aa~~asg-------~~~~~~~~~~~~~~~ 67 (252)
T cd07221 2 SLSFAGCGFLGFYHVGVTRCLSERA-------PHLLRDARMFFGASAGALHCVTFLSG-------LPLDQILQILMDLVR 67 (252)
T ss_pred EEEEeCcHHHHHHHHHHHHHHHHhC-------cchhccCCEEEEEcHHHHHHHHHHhC-------CCHHHHHHHHHHHHH
Confidence 3899999999999999999999862 13445699999999999999999998 566777777666543
Q ss_pred CCcCCCccCCchhHHHHhhhccccccCC-ChHHHHHHHHHHhcccchhhhcCceEEEEeecCCCcceEeeccchhhhhcC
Q 027230 94 KIFPQLSRGGNFLRSIISSLSKWVRPMY-DGKYIRSLTKEILEDITIKDTLTNLIIPTFDIKRLQPVIFSSNDALQVKKG 172 (226)
Q Consensus 94 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~l~~~~~~~~l~~~~~~l~v~a~~~~~~~~~~f~~~~~~~~~~~ 172 (226)
..-... + .+.++.| ....+++.+++.++.........++.|++||+.+++.++|++ ++.
T Consensus 68 ~~~~~~-------------~-g~~~~~~~~~~~l~~~l~~~lp~~~~~~~~~~l~I~~T~l~tg~~v~~~~---f~s--- 127 (252)
T cd07221 68 SARSRN-------------I-GILHPSFNLSKHLRDGLQRHLPDNVHQLISGKMCISLTRVSDGENVLVSD---FHS--- 127 (252)
T ss_pred hccccc-------------c-cccCcccCHHHHHHHHHHHHCCcCHHHhcCCCEEEEEEECCCCCEEEEec---CCC---
Confidence 211110 0 1112222 246777888888876544444568999999999999999988 543
Q ss_pred CCCCchHHHHHhHhccCCCC--CCceeeeccCCCCCCcccceeeecccccCCCCCC
Q 027230 173 ALKNARLADICVGTSAAPTY--LPAHHFVTKDSTTGDTCSFDLIDGGVAANDPVIN 226 (226)
Q Consensus 173 ~~~~~~l~~a~~ASsA~P~~--F~p~~i~~~~~~~g~~~~~~~iDGGv~~N~P~l~ 226 (226)
...+++|++||||+|+| |.|+.+++. .|+|||+.+|.|+.+
T Consensus 128 ---~~~l~~av~AS~siP~~~g~~P~~~~G~----------~yvDGGv~dnlPv~~ 170 (252)
T cd07221 128 ---KDEVVDALVCSCFIPFFSGLIPPSFRGV----------RYVDGGVSDNVPFFD 170 (252)
T ss_pred ---chHHHHHHHHHccCccccCCCCeEECCE----------EEEeCCcccCCCccC
Confidence 34789999999999999 557777644 899999999999864
No 26
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=99.96 E-value=2.8e-29 Score=218.40 Aligned_cols=185 Identities=21% Similarity=0.324 Sum_probs=133.6
Q ss_pred eEEEEEeeCCchhhHHHHHHHHHHHHHhhhcCCCCCccccccceeeecCHHHHHHHHhcCCCCCCCccccHHHHHHHHHh
Q 027230 11 KITVLSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFE 90 (226)
Q Consensus 11 ~~~iL~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~ 90 (226)
+..+|+|+|||+||++|+|||++|+|+ ...+|+|+|||+||++|++++++ +.+|+.+++..
T Consensus 72 GrtALvLsGGG~rG~~hiGVLkaL~E~-----------gl~p~vIsGTSaGAivAal~as~--------~~eel~~~l~~ 132 (421)
T cd07230 72 GRTALLLSGGGTFGMFHIGVLKALFEA-----------NLLPRIISGSSAGSIVAAILCTH--------TDEEIPELLEE 132 (421)
T ss_pred CCEEEEEcCcHHHHHHHHHHHHHHHHc-----------CCCCCEEEEECHHHHHHHHHHcC--------CHHHHHHHHHh
Confidence 467999999999999999999999874 34579999999999999999985 45677776665
Q ss_pred hCC---CCcCCCccCCchhHHHHhhhccccccCCChHHHHHHHHHHhcccchhhh----cCceEEEEeecCCCc-ceEee
Q 027230 91 HCP---KIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDITIKDT----LTNLIIPTFDIKRLQ-PVIFS 162 (226)
Q Consensus 91 ~~~---~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~~~----~~~l~v~a~~~~~~~-~~~f~ 162 (226)
... .+|........++..+.++++ .++.+|.+.+++.+++.+++.++.+. .+.+.|++++.+.++ |.++.
T Consensus 133 ~~~~~~~~f~~~~~~~~~~~~~~~l~~--~g~~~d~~~l~~~l~~~lgd~tF~Eay~rt~r~L~I~vt~~~~~~~p~lln 210 (421)
T cd07230 133 FPYGDFNVFEDPDQEENVLQKLSRFLK--YGSWFDISHLTRVMRGFLGDLTFQEAYNRTRRILNITVSPASIYELPRLLN 210 (421)
T ss_pred cchHHHHHHhcccccchHHHHHHHHHh--cCCCcCHHHHHHHHHHHhCCCCHHHHHHhhCCeEEEEEEeccccCCCeeee
Confidence 321 234332110012333333222 35679999999999999999888765 455778888777765 44433
Q ss_pred ccchhhhhcCCCCCchHHHHHhHhccCCCCCCceeeeccCCCCCCcc-----cceeeecccccCCCC
Q 027230 163 SNDALQVKKGALKNARLADICVGTSAAPTYLPAHHFVTKDSTTGDTC-----SFDLIDGGVAANDPV 224 (226)
Q Consensus 163 ~~~~~~~~~~~~~~~~l~~a~~ASsA~P~~F~p~~i~~~~~~~g~~~-----~~~~iDGGv~~N~P~ 224 (226)
|.. .++..+|+|++||||+|++|+|+++..++..+|+.. ...|+|||+.+|.|.
T Consensus 211 ----y~t----~p~v~I~~AV~AS~AlP~vf~pv~l~~Kd~~~g~i~p~~~~g~~~vDGgv~~~iPi 269 (421)
T cd07230 211 ----YIT----APNVLIWSAVCASCSVPGVFPSSPLYEKDPKTGEIVPWNPSSVKWIDGSVDNDLPM 269 (421)
T ss_pred ----ecc----CCCcHHHHHHHHhcCchhhcCCeEEEeecCCCCceecccCCCCceeCCCccccChH
Confidence 221 246789999999999999999999865543233221 247999999999995
No 27
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=99.96 E-value=6.7e-29 Score=215.18 Aligned_cols=183 Identities=16% Similarity=0.204 Sum_probs=134.5
Q ss_pred eEEEEEeeCCchhhHHHHHHHHHHHHHhhhcCCCCCccccccceeeecCHHHHHHHHhcCCCCCCCccccHHHHHHHHHh
Q 027230 11 KITVLSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFE 90 (226)
Q Consensus 11 ~~~iL~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~ 90 (226)
+..+|+|+|||+||++|+|||++|+++ ...||+|+|||+||++|++++.+ +.+|+.+.+..
T Consensus 66 grtALvLsGGG~rG~~h~GVlkaL~e~-----------gllp~iI~GtSAGAivaalla~~--------t~~el~~~~~~ 126 (407)
T cd07232 66 GRTALCLSGGAAFAYYHFGVVKALLDA-----------DLLPNVISGTSGGSLVAALLCTR--------TDEELKQLLVP 126 (407)
T ss_pred CCEEEEECCcHHHHHHHHHHHHHHHhC-----------CCCCCEEEEECHHHHHHHHHHcC--------CHHHHHHHHhh
Confidence 357999999999999999999999985 35689999999999999999975 34666666554
Q ss_pred hCCCCcCCCccCCchhHHHHhhhccccccCCChHHHHHH-HHHHhcccchhhhc----CceEEEEeecCCCcceEeeccc
Q 027230 91 HCPKIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSL-TKEILEDITIKDTL----TNLIIPTFDIKRLQPVIFSSND 165 (226)
Q Consensus 91 ~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-l~~~~~~~~l~~~~----~~l~v~a~~~~~~~~~~f~~~~ 165 (226)
.....|..... .+..++.++++ .+..+|.+.+++. ++..+++.++.+.. +.+.|++++.+++++..|.+
T Consensus 127 ~~~~~~~~~~~--~~~~~~~~~l~--~G~~~d~~~l~~~~~~~~~gd~TFeEa~~~tgr~l~I~vt~~d~~~~~~lln-- 200 (407)
T cd07232 127 ELARKITACEP--PWLVWIPRWLK--TGARFDSVEWARTCCWFTRGSMTFEEAYERTGRILNISVVPADPHSPTILLN-- 200 (407)
T ss_pred hhhhhhhhccc--hHHHHHHHHHh--cCCCCCHHHHHHHHHHHhcCCCCHHHHHHhcCCEEEEEEEECCCCCceEEec--
Confidence 22211111100 12223333222 3457899999998 78899998877653 45778888888888888877
Q ss_pred hhhhhcCCCCCchHHHHHhHhccCCCCCCceeeeccCCCCCCc-----ccceeeecccccCCCC
Q 027230 166 ALQVKKGALKNARLADICVGTSAAPTYLPAHHFVTKDSTTGDT-----CSFDLIDGGVAANDPV 224 (226)
Q Consensus 166 ~~~~~~~~~~~~~l~~a~~ASsA~P~~F~p~~i~~~~~~~g~~-----~~~~~iDGGv~~N~P~ 224 (226)
|.. .+++.+|+|++||||+|++|+|+++-.++. +|+. ....|+|||+.+|.|.
T Consensus 201 -~~t----sp~v~I~sAV~AS~svPgvf~pv~l~~k~~-~g~~~~~~~~g~~~~DGgv~~diP~ 258 (407)
T cd07232 201 -YLT----SPNCTIWSAVLASAAVPGILNPVVLMMKDP-DGTLIPPFSFGSKWKDGSLRTDIPL 258 (407)
T ss_pred -cCC----CCccHHHHHHhcccCccccccCeEEEeecC-CCCcccccCCCCceecCCcCcccHH
Confidence 543 246889999999999999999999854442 3432 2347999999999995
No 28
>cd07219 Pat_PNPLA1 Patatin-like phospholipase domain containing protein 1. Members of this family share a patatin domain, initially discovered in potato tubers. Some members of PNPLA1 subfamily do not have the lipase consensus sequence Gly-X-Ser-X-Gly which is essential for hydrolase activity. This family includes PNPLA1 from Homo sapiens and Gallus gallus. Currently, there is no literature available on the physiological role, structure, or enzymatic activity of PNPLA1. It is expressed in various human tissues in low mRNA levels.
Probab=99.96 E-value=1.1e-28 Score=208.52 Aligned_cols=167 Identities=17% Similarity=0.254 Sum_probs=127.4
Q ss_pred eEEEEEeeCCchhhHHHHHHHHHHHHHhhhcCCCCCccccccceeeecCHHHHHHHHhcCCCCCCCccccHHHHHHHHHh
Q 027230 11 KITVLSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFE 90 (226)
Q Consensus 11 ~~~iL~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~ 90 (226)
....|+|+|||+||+||+||+++|+|.- +++...||.|+|||+||++|++++++ .+++++.+.+..
T Consensus 11 ~~~gLvFsGGGfrGiYHvGVl~aL~E~g-------p~ll~~~d~IaGtSAGALvAAl~asG-------~s~de~~r~~~~ 76 (382)
T cd07219 11 TPHSISFSGSGFLSFYQAGVVDALRDLA-------PRMLETAHRVAGTSAGSVIAALVVCG-------ISMDEYLRVLNV 76 (382)
T ss_pred CCceEEEcCcHHHHHHHHHHHHHHHhcC-------CcccccCCeEEEEcHHHHHHHHHHhC-------CCHHHHHHHHHH
Confidence 3567999999999999999999998852 23456799999999999999999998 567777766543
Q ss_pred hCCCCcCCCccCCchhHHHHhhhccccccCCC-hHHHHHHHHHHhcccchhhhcCceEEEEeecCCCcceEeeccchhhh
Q 027230 91 HCPKIFPQLSRGGNFLRSIISSLSKWVRPMYD-GKYIRSLTKEILEDITIKDTLTNLIIPTFDIKRLQPVIFSSNDALQV 169 (226)
Q Consensus 91 ~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~l~~~~~~~~l~~~~~~l~v~a~~~~~~~~~~f~~~~~~~~ 169 (226)
..... ... + + .+..+.++ .+.+++.|++.+.+..+.+...++.|++||+.+++.++|+. |..
T Consensus 77 ~~~~~-r~~-----~-------l-G~~~p~~~l~~~lr~~L~~~LP~da~e~~~g~L~IsaTdl~tGknv~fS~---F~S 139 (382)
T cd07219 77 GVAEV-RKS-----F-------L-GPLSPSCKMVQMMRQFLYRVLPEDSYKVATGKLHVSLTRVTDGENVVVSE---FTS 139 (382)
T ss_pred HHHHH-HHh-----h-------c-cCccccchHHHHHHHHHHhhCcHhhHHhCCCcEEEEEEECCCCCEEEEec---cCC
Confidence 32221 110 0 1 11111111 15677888888888888888899999999999999999998 643
Q ss_pred hcCCCCCchHHHHHhHhccCCCCC--CceeeeccCCCCCCcccceeeecccccCCCC
Q 027230 170 KKGALKNARLADICVGTSAAPTYL--PAHHFVTKDSTTGDTCSFDLIDGGVAANDPV 224 (226)
Q Consensus 170 ~~~~~~~~~l~~a~~ASsA~P~~F--~p~~i~~~~~~~g~~~~~~~iDGGv~~N~P~ 224 (226)
+..+.+|++|||++|+|+ .|.++++. .|||||+.+|+|+
T Consensus 140 ------~~dLidAV~AScaIP~y~G~~Pp~irG~----------~yVDGGvsdnlPv 180 (382)
T cd07219 140 ------KEELIEALYCSCFVPVYCGLIPPTYRGV----------RYIDGGFTGMQPC 180 (382)
T ss_pred ------cchHHHHHHHHccCccccCCcCeEECCE----------EEEcCCccCCcCc
Confidence 357999999999999985 35577643 7999999999996
No 29
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=99.95 E-value=1.5e-27 Score=194.28 Aligned_cols=166 Identities=19% Similarity=0.201 Sum_probs=121.8
Q ss_pred EEEEeeCCchhhHHHHHHHHHHHHHhhhcCCCCCccccccceeeecCHHHHHHHHhcCCCCCCCccccHHHHHHHHHhhC
Q 027230 13 TVLSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFEHC 92 (226)
Q Consensus 13 ~iL~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~~~ 92 (226)
--|+|+|||+||+||+||+++|+|+- +.+...+|.|+|+||||++|++++++ .+.+++.+...++.
T Consensus 5 ~~LsfsGGG~rG~yh~GVl~~L~e~g-------~~l~~~~~~i~G~SAGAl~aa~~a~g-------~~~~~~~~~~~~~a 70 (249)
T cd07220 5 WNISFAGCGFLGVYHVGVASCLLEHA-------PFLVANARKIYGASAGALTATALVTG-------VCLGECGASVIRVA 70 (249)
T ss_pred ceEEEeChHHHHHHHHHHHHHHHhcC-------CcccccCCeEEEEcHHHHHHHHHHcC-------CCHHHHHHHHHHHH
Confidence 35999999999999999999999862 23445689999999999999999998 45555544444332
Q ss_pred CCCcCCCccCCchhHHHHhhhccccccCCC-hHHHHHHHHHHhcccchhhhcCceEEEEeecCCCcceEeeccchhhhhc
Q 027230 93 PKIFPQLSRGGNFLRSIISSLSKWVRPMYD-GKYIRSLTKEILEDITIKDTLTNLIIPTFDIKRLQPVIFSSNDALQVKK 171 (226)
Q Consensus 93 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~l~~~~~~~~l~~~~~~l~v~a~~~~~~~~~~f~~~~~~~~~~ 171 (226)
++. ..+ ++ ....+.|+ .+.+++.+.+.+.+..+.....++.|++|++.+++.++|++ |..+
T Consensus 71 ~~~--r~~----~~--------g~~~~~~~l~~~l~~~l~~~lp~~a~~~~~~~l~is~T~~~tg~~~~~s~---f~s~- 132 (249)
T cd07220 71 KEA--RKR----FL--------GPLHPSFNLVKILRDGLLRTLPENAHELASGRLGISLTRVSDGENVLVSD---FNSK- 132 (249)
T ss_pred HHh--hHh----hc--------cCccccchHHHHHHHHHHHHCChhhHHHCCCcEEEEEEECCCCCEEEEec---CCCc-
Confidence 111 000 00 00011111 13577777888877777777889999999999999999998 6532
Q ss_pred CCCCCchHHHHHhHhccCCCCC--CceeeeccCCCCCCcccceeeecccccCCCCC
Q 027230 172 GALKNARLADICVGTSAAPTYL--PAHHFVTKDSTTGDTCSFDLIDGGVAANDPVI 225 (226)
Q Consensus 172 ~~~~~~~l~~a~~ASsA~P~~F--~p~~i~~~~~~~g~~~~~~~iDGGv~~N~P~l 225 (226)
..+.+|++|||++|+|+ .|..+++. .|+|||+.+|.|+.
T Consensus 133 -----~dLi~al~AScsiP~~~g~~P~~~~G~----------~yvDGGvsdnlPv~ 173 (249)
T cd07220 133 -----EELIQALVCSCFIPVYCGLIPPTLRGV----------RYVDGGISDNLPQY 173 (249)
T ss_pred -----chHHHHHHHhccCccccCCCCeeECCE----------EEEcCCcccCCCCC
Confidence 46899999999999875 35556543 89999999999975
No 30
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=99.95 E-value=3.2e-27 Score=191.56 Aligned_cols=157 Identities=18% Similarity=0.195 Sum_probs=120.1
Q ss_pred EEeeCCchhhHHHHHHHHHHHHHhhhcCCCCCccccccceeeecCHHHHHHHHhcCCCCCCCccccHHHHHHHHHhhCCC
Q 027230 15 LSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFEHCPK 94 (226)
Q Consensus 15 L~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~~~~~ 94 (226)
|+|+|||.+|+||+|||++|+|+ .+...|+.++|||+||++|++++++ .+.+++.+.+.++..+
T Consensus 2 lsfsggG~lg~yh~GVl~~L~e~---------gi~~~~~~i~G~SAGAl~aa~~asg-------~~~~~~~~~~~~~~~~ 65 (233)
T cd07224 2 FSFSAAGLLFPYHLGVLSLLIEA---------GVINETTPLAGASAGSLAAACSASG-------LSPEEALEATEELAED 65 (233)
T ss_pred eeecchHHHHHHHHHHHHHHHHc---------CCCCCCCEEEEEcHHHHHHHHHHcC-------CCHHHHHHHHHHHHHH
Confidence 89999999999999999999985 3444589999999999999999998 4566777666655433
Q ss_pred CcCCCccCCchhHHHHhhhccccccCCC-hHHHHHHHHHHhcccchhhhc-CceEEEEeecCCCc-ceEeeccchhhhhc
Q 027230 95 IFPQLSRGGNFLRSIISSLSKWVRPMYD-GKYIRSLTKEILEDITIKDTL-TNLIIPTFDIKRLQ-PVIFSSNDALQVKK 171 (226)
Q Consensus 95 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~l~~~~~~~~l~~~~-~~l~v~a~~~~~~~-~~~f~~~~~~~~~~ 171 (226)
..... ..++ ...+++.+++.+......... .++.|.+|++.+++ ..+++. |..
T Consensus 66 ~~~~~-------------------~~~~~~~~l~~~l~~~lp~d~~e~~~~~~l~i~~T~~~~~~~~~~v~~---f~~-- 121 (233)
T cd07224 66 CRSNG-------------------TAFRLGGVLRDELDKTLPDDAHERCNRGRIRVAVTQLFPVPRGLLVSS---FDS-- 121 (233)
T ss_pred HHhcC-------------------CcccHHHHHHHHHHHHcCcHHHHHhcCCCEEEEEEecccCCCceEEEe---cCC--
Confidence 22111 1111 255777888888877666666 78999999998764 566655 432
Q ss_pred CCCCCchHHHHHhHhccCCCCCCc---eeeeccCCCCCCcccceeeecccccCCCCC
Q 027230 172 GALKNARLADICVGTSAAPTYLPA---HHFVTKDSTTGDTCSFDLIDGGVAANDPVI 225 (226)
Q Consensus 172 ~~~~~~~l~~a~~ASsA~P~~F~p---~~i~~~~~~~g~~~~~~~iDGGv~~N~P~l 225 (226)
+..+.+|++|||++|++|+| +.++++ .|+|||+.+|.|..
T Consensus 122 ----~~~l~~al~AS~~iP~~~~p~~~v~~~G~----------~~vDGG~~~~~P~~ 164 (233)
T cd07224 122 ----KSDLIDALLASCNIPGYLAPWPATMFRGK----------LCVDGGFALFIPPT 164 (233)
T ss_pred ----cchHHHHHHHhccCCcccCCCCCeeECCE----------EEEeCCcccCCCCC
Confidence 23588999999999999984 677643 89999999999975
No 31
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=99.94 E-value=8.9e-27 Score=182.59 Aligned_cols=182 Identities=20% Similarity=0.283 Sum_probs=102.3
Q ss_pred EEeeCCchhhHHHHHHHHHHHHHhhhcCCCCCccccccceeeecCHHHHHHHHhcCCCCCCCccccHHHHHHHHHhhCCC
Q 027230 15 LSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFEHCPK 94 (226)
Q Consensus 15 L~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~~~~~ 94 (226)
|+|+|||+||++++|+|++|. .+....||+|+|||+||++|++++.+.... ...+.+.+.+......
T Consensus 1 LvlsGGG~rg~~~~G~l~~L~----------~~~~~~~d~i~GtS~Gal~a~~~~~~~~~~---~~~~~~~~~~~~~~~~ 67 (204)
T PF01734_consen 1 LVLSGGGSRGAYQAGVLKALG----------QGLGERFDVISGTSAGALNAALLALGYDPD---ESLDQFYDLWRNLFFS 67 (204)
T ss_dssp EEE---CCGCCCCHHHHHHHC----------CTGCCT-SEEEEECCHHHHHHHHHTC-TCC---CCCCHHCCHHHHHHHC
T ss_pred CEEcCcHHHHHHHHHHHHHHh----------hhhCCCccEEEEcChhhhhHHHHHhCCCHH---HHHHHHHHHHHhhccc
Confidence 899999999999999999981 146789999999999999999999884221 1223333333332111
Q ss_pred Cc-CCCccCCchhHHHHhhhc-cccccCCChHHHHHHHHHHhcccchhhhcCceEEEE-------e---ec-------CC
Q 027230 95 IF-PQLSRGGNFLRSIISSLS-KWVRPMYDGKYIRSLTKEILEDITIKDTLTNLIIPT-------F---DI-------KR 155 (226)
Q Consensus 95 ~f-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~l~~~~~~l~v~a-------~---~~-------~~ 155 (226)
.. ..... .......... ......++...+++.+++.++.....+......... . .. ..
T Consensus 68 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (204)
T PF01734_consen 68 SNLMKRRR---PRKAFRRLRGLFGGSGLFDSEPLRDWLRRVLGDLTLEEFSARLPRAIGAADDFTTRSRSIFQSPSSPFR 144 (204)
T ss_dssp CCTH---------HHT-------SSS-SS--HHHHHHHHHHHCCHCHHHHCTCECCC-EE--------------EEECCC
T ss_pred cccccccc---cccccccccccccCccchhHHHHHHHHHHhccccCHHHhhhcccccccccccccccccccccccccccc
Confidence 11 00000 0000001111 224567899999999999998776655433221110 0 00 00
Q ss_pred CcceEeeccchhhhhcCCCCCchHHHHHhHhccCCCCCCceeeeccCCCCCCcccceeeecccccCCCCC
Q 027230 156 LQPVIFSSNDALQVKKGALKNARLADICVGTSAAPTYLPAHHFVTKDSTTGDTCSFDLIDGGVAANDPVI 225 (226)
Q Consensus 156 ~~~~~f~~~~~~~~~~~~~~~~~l~~a~~ASsA~P~~F~p~~i~~~~~~~g~~~~~~~iDGGv~~N~P~l 225 (226)
........ .....+..++..+++|++||+|+|++|+|+.+++. .|+|||+.+|+|+.
T Consensus 145 ~~~~~~~~---~~~~~~~~~~~~l~~a~~AS~a~P~~~~p~~~~g~----------~~~DGG~~~n~P~~ 201 (204)
T PF01734_consen 145 ASSNNFNE---SRSRYDFDPDVPLWDAVRASSAIPGIFPPVKIDGE----------YYIDGGILDNNPIE 201 (204)
T ss_dssp CECCEEEC---CCCCTTCCCTSBHHHHHHHCCHSTTTSTTEEETS-----------EEEEGGGCS---GG
T ss_pred cccccccc---ccccccCCCcchHHHhhChhccccccCCCEEECCE----------EEEecceeeccccc
Confidence 00001111 11112234578999999999999999999999754 89999999999974
No 32
>cd07223 Pat_PNPLA5-mammals Patatin-like phospholipase domain containing protein 5. PNPLA5, also known as GS2L (GS2-like), plays a role in regulation of adipocyte differentiation. PNPLA5 is expressed in brain tissue in high mRNA levels and low levels in liver tissue. There is no concrete evidence in support of the enzymatic activity of GS2L. This family includes patatin-like proteins: GS2L (GS2-like) and PNPLA5 (Patatin-like phospholipase domain-containing protein 5) reported exclusively in mammals.
Probab=99.93 E-value=1.7e-25 Score=188.54 Aligned_cols=167 Identities=20% Similarity=0.174 Sum_probs=131.1
Q ss_pred eEEEEEeeCCchhhHHHHHHHHHHHHHhhhcCCCCCccccccceeeecCHHHHHHHHhcCCCCCCCccccHHHHHHHHHh
Q 027230 11 KITVLSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFE 90 (226)
Q Consensus 11 ~~~iL~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~ 90 (226)
+.--|+|+|||.+|+||+||+++|.|+-. ++....+-|+|+|+|||+|++++.+ .+++++.+...+
T Consensus 8 ~~~~LsfSGgGflG~yHvGV~~~L~e~~p-------~ll~~~~~iaGaSAGAL~aa~~a~g-------~~~~~~~~~i~~ 73 (405)
T cd07223 8 GGWNLSFSGAGYLGLYHVGVTECLRQRAP-------RLLQGARRIYGSSSGALNAVSIVCG-------KSADFCCSNLLG 73 (405)
T ss_pred CCEEEEEeCcHHHHHHHHHHHHHHHHhCc-------hhhccCCeeeeeCHHHHHHHHHHhC-------CCHHHHHHHHHH
Confidence 34679999999999999999999998632 3445567899999999999999998 567755544433
Q ss_pred hCCCCcCCCccCCchhHHHHhhhccccccCCC-hHHHHHHHHHHhcccchhhhcCceEEEEeecCCCcceEeeccchhhh
Q 027230 91 HCPKIFPQLSRGGNFLRSIISSLSKWVRPMYD-GKYIRSLTKEILEDITIKDTLTNLIIPTFDIKRLQPVIFSSNDALQV 169 (226)
Q Consensus 91 ~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~l~~~~~~~~l~~~~~~l~v~a~~~~~~~~~~f~~~~~~~~ 169 (226)
+.++. +. ...+.+++.|+ .+.+++.|++.+.+........++.|++|++.+++.++.++ |..
T Consensus 74 ia~~~----r~----------~~lG~~~p~f~l~~~lr~~L~~~LP~daHe~~sgrL~ISlT~l~~gknvlvS~---F~S 136 (405)
T cd07223 74 MVKHL----ER----------LSLGIFHPAYAPIEHIRQQLQESLPPNIHILASQRLGISMTRWPDGRNFIVTD---FAT 136 (405)
T ss_pred HHHHh----hh----------hccCCCCccccHHHHHHHHHHHhCCchhhHHhCCceEEEEEEccCCceEEecC---CCC
Confidence 32211 00 00122344444 46789999999998888888899999999999999999888 765
Q ss_pred hcCCCCCchHHHHHhHhccCCCC--CCceeeeccCCCCCCcccceeeecccccCCCC
Q 027230 170 KKGALKNARLADICVGTSAAPTY--LPAHHFVTKDSTTGDTCSFDLIDGGVAANDPV 224 (226)
Q Consensus 170 ~~~~~~~~~l~~a~~ASsA~P~~--F~p~~i~~~~~~~g~~~~~~~iDGGv~~N~P~ 224 (226)
+ ..|.+|+.|||.+|+| |.|..+++. .|||||+.+|.|.
T Consensus 137 r------edLIqALlASc~IP~y~g~~P~~~rG~----------~yVDGGvsnNLP~ 177 (405)
T cd07223 137 R------DELIQALICTLYFPFYCGIIPPEFRGE----------RYIDGALSNNLPF 177 (405)
T ss_pred H------HHHHHHHHHhccCccccCCCCceECCE----------EEEcCcccccCCC
Confidence 4 4699999999999999 888888754 8999999999995
No 33
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=99.92 E-value=4.6e-24 Score=182.42 Aligned_cols=183 Identities=20% Similarity=0.218 Sum_probs=131.3
Q ss_pred eEEEEEeeCCchhhHHHHHHHHHHHHHhhhcCCCCCccccccceeeecCHHHHHHHHhcCCCCCCCccccHHHHHHHHHh
Q 027230 11 KITVLSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFE 90 (226)
Q Consensus 11 ~~~iL~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~ 90 (226)
+..+|+|+|||++|++|+||+++|+++ ...+++|+|||+|||+|++++.. +.+|+.+++..
T Consensus 82 GrtAlvlsGGg~~G~~h~Gv~kaL~e~-----------gl~p~~i~GtS~Gaivaa~~a~~--------~~~e~~~~l~~ 142 (391)
T cd07229 82 GRTALVLQGGSIFGLCHLGVVKALWLR-----------GLLPRIITGTATGALIAALVGVH--------TDEELLRFLDG 142 (391)
T ss_pred CCEEEEecCcHHHHHHHHHHHHHHHHc-----------CCCCceEEEecHHHHHHHHHHcC--------CHHHHHHHHhc
Confidence 467999999999999999999999985 46789999999999999999974 45777776654
Q ss_pred hCCC--CcCC---------CccCC--chhHHHHhhhccccccCCChHHHHHHHHHHhcccchhhh----cCceEEEEeec
Q 027230 91 HCPK--IFPQ---------LSRGG--NFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDITIKDT----LTNLIIPTFDI 153 (226)
Q Consensus 91 ~~~~--~f~~---------~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~~~----~~~l~v~a~~~ 153 (226)
..-+ .|.. ....| .+...+.++++ .+..+|.+.|++.+++.+|+.+|+|. .+.+.|++++.
T Consensus 143 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~r~l~--~G~l~D~~~l~~~lr~~lgd~TFeEAy~rTgriLnItv~~~ 220 (391)
T cd07229 143 DGIDLSAFNRLRGKKSLGYSGYGWLGTLGRRIQRLLR--EGYFLDVKVLEEFVRANLGDLTFEEAYARTGRVLNITVAPS 220 (391)
T ss_pred cchhhhhhhhhccccccccccccccchHHHHHHHHHc--CCCcccHHHHHHHHHHHcCCCcHHHHHHhhCCEEEEEEECC
Confidence 2111 1111 01110 12222222222 35589999999999999999998875 46688888886
Q ss_pred C-CCcceEeeccchhhhhcCCCCCchHHHHHhHhccCCCCCC-ceeeeccCCCCCCcccc----------eeeecccccC
Q 027230 154 K-RLQPVIFSSNDALQVKKGALKNARLADICVGTSAAPTYLP-AHHFVTKDSTTGDTCSF----------DLIDGGVAAN 221 (226)
Q Consensus 154 ~-~~~~~~f~~~~~~~~~~~~~~~~~l~~a~~ASsA~P~~F~-p~~i~~~~~~~g~~~~~----------~~iDGGv~~N 221 (226)
+ .+.|.++.. .. .+++.||.|++||||.|+.|+ |+.+-.++. +|+...+ +..||.+...
T Consensus 221 ~~~~~p~LLNy---lT-----aPnVlIwsAv~aS~a~p~~~~~~~~L~~Kd~-~G~ivp~~~~~~~~~~~~~~dgs~~~D 291 (391)
T cd07229 221 AVSGSPNLLNY---LT-----APNVLIWSAALASNASSAALYRSVTLLCKDE-TGSIVPWPPVQVLFFRSWRGANYSERE 291 (391)
T ss_pred CCCCCCeeeec---CC-----CCCchHHHHHHHHcCCccccCCCceEEEECC-CCCEeeCCCcccccccccccCCCcccc
Confidence 6 456777665 22 458999999999999999887 988877765 4533222 2457877777
Q ss_pred CC
Q 027230 222 DP 223 (226)
Q Consensus 222 ~P 223 (226)
.|
T Consensus 292 lP 293 (391)
T cd07229 292 SP 293 (391)
T ss_pred Ch
Confidence 66
No 34
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=99.91 E-value=3.5e-24 Score=177.35 Aligned_cols=144 Identities=18% Similarity=0.332 Sum_probs=110.3
Q ss_pred eEEEEEeeCCchhhHHHHHHHHHHHHHhhhcCCCCCccccccceeeecCHHHHHHHHhcCCCCCCCccccHHHHHHHHHh
Q 027230 11 KITVLSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFE 90 (226)
Q Consensus 11 ~~~iL~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~ 90 (226)
+..+|+|+|||++|++|+||+++|+++ ...+++|+|+|+||++|++++.. +.+|+.+++
T Consensus 67 G~~aLvlsGGg~~g~~h~GVlkaL~e~-----------gl~p~~i~GsSaGAivaa~~~~~--------t~~El~~~~-- 125 (323)
T cd07231 67 GRTALLLSGGAALGTFHVGVVRTLVEH-----------QLLPRVIAGSSVGSIVCAIIATR--------TDEELQSFF-- 125 (323)
T ss_pred CCEEEEEcCcHHHHHHHHHHHHHHHHc-----------CCCCCEEEEECHHHHHHHHHHcC--------CHHHHHHHH--
Confidence 357899999999999999999999884 35689999999999999999874 356666544
Q ss_pred hCCCCcCCCccCCchhHHHHhhhccccccCCChHHHHHHHHHHhcccchhhh----cCceEEEEeecCCCc-ceEeeccc
Q 027230 91 HCPKIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDITIKDT----LTNLIIPTFDIKRLQ-PVIFSSND 165 (226)
Q Consensus 91 ~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~~~----~~~l~v~a~~~~~~~-~~~f~~~~ 165 (226)
++.+|+.+|.|. .+.+.|++++.+.++ +.++..
T Consensus 126 ----------------------------------------~~~~gd~TF~Eay~~tgr~lnI~v~~~~~~~~~~lln~-- 163 (323)
T cd07231 126 ----------------------------------------RALLGDLTFQEAYDRTGRILGITVCPPRKSEPPRLLNY-- 163 (323)
T ss_pred ----------------------------------------HHHcCcccHHHHHhccCCEEEEEEecccCCCCceeecc--
Confidence 233444444443 567888888887764 445443
Q ss_pred hhhhhcCCCCCchHHHHHhHhccCCCCCCceeeeccCCCCCCccc----------ceeeecccccCCCC
Q 027230 166 ALQVKKGALKNARLADICVGTSAAPTYLPAHHFVTKDSTTGDTCS----------FDLIDGGVAANDPV 224 (226)
Q Consensus 166 ~~~~~~~~~~~~~l~~a~~ASsA~P~~F~p~~i~~~~~~~g~~~~----------~~~iDGGv~~N~P~ 224 (226)
.. .+|+.||.|++||||+|++|+|+.+-.++. +|+... ..++||++..+.|.
T Consensus 164 --~T----~Pnv~I~sAv~aS~a~P~if~~~~L~~Kd~-~G~ivp~~~~~~~~~~~~~~DGs~~~dlP~ 225 (323)
T cd07231 164 --LT----SPHVVIWSAVAASCAFPGLFEAQELMAKDR-FGEIVPYHPPGKVSSPRRWRDGSLEQDLPM 225 (323)
T ss_pred --CC----CCCcHHHHHHHHHcCChhhccceeEEEECC-CCCEeeccCCCccccccccccCcccccCch
Confidence 21 357999999999999999999999766664 454432 24899999999985
No 35
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=99.91 E-value=2.8e-24 Score=177.67 Aligned_cols=142 Identities=17% Similarity=0.252 Sum_probs=104.8
Q ss_pred eEEEEEeeCCchhhHHHHHHHHHHHHHhhhcCCCCCccccccceeeecCHHHHHHHHhcCCCCCCCccccHHHHHHHHHh
Q 027230 11 KITVLSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFE 90 (226)
Q Consensus 11 ~~~iL~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~ 90 (226)
+..+|+|+|||+||++|+|||++|+++ ...+|+|+|||+||++|++++.+. .+|+
T Consensus 68 g~~aLvlsGGg~~g~~h~Gvl~aL~e~-----------~l~~~~i~GtSaGAi~aa~~~~~~--------~~El------ 122 (298)
T cd07206 68 GRTALMLSGGASLGLFHLGVVKALWEQ-----------DLLPRVISGSSAGAIVAALLGTHT--------DEEL------ 122 (298)
T ss_pred CCEEEEEcCcHHHHHHHHHHHHHHHHc-----------CCCCCEEEEEcHHHHHHHHHHcCC--------cHHH------
Confidence 356899999999999999999999874 345799999999999999999862 2333
Q ss_pred hCCCCcCCCccCCchhHHHHhhhccccccCCChHHHHHHHHHHhcccchhhhcCceEEEEeecCCCcceEeeccchhhhh
Q 027230 91 HCPKIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDITIKDTLTNLIIPTFDIKRLQPVIFSSNDALQVK 170 (226)
Q Consensus 91 ~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~~~~~~l~v~a~~~~~~~~~~f~~~~~~~~~ 170 (226)
+... .+++. +..+.+.+.|++++.++++...+.+ |..
T Consensus 123 -----~gdl-------------------------Tf~EA---------~~~tgr~lnI~vt~~~~~~~~~lln---~~t- 159 (298)
T cd07206 123 -----IGDL-------------------------TFQEA---------YERTGRIINITVAPAEPHQNSRLLN---ALT- 159 (298)
T ss_pred -----HcCC-------------------------CHHHH---------HHhcCCEEEEEEEECCCCCceEEec---ccC-
Confidence 1110 01111 1224567889999998887766666 432
Q ss_pred cCCCCCchHHHHHhHhccCCCCCCceeeeccCCCCCCc----ccceeeecccccCCCC
Q 027230 171 KGALKNARLADICVGTSAAPTYLPAHHFVTKDSTTGDT----CSFDLIDGGVAANDPV 224 (226)
Q Consensus 171 ~~~~~~~~l~~a~~ASsA~P~~F~p~~i~~~~~~~g~~----~~~~~iDGGv~~N~P~ 224 (226)
.+++.+|+|++||||+|++|+|+.+..++. +|+. ....|+|||+.+|.|.
T Consensus 160 ---spnv~i~sAv~AS~slP~~f~pv~l~~k~~-~g~~~p~~~g~~~~DGgv~~~iPv 213 (298)
T cd07206 160 ---SPNVLIWSAVLASCAVPGVFPPVMLMAKNR-DGEIVPYLPGRKWVDGSVSDDLPA 213 (298)
T ss_pred ---CCchHHHHHHhhccCccccccCeEEEeecC-CCccccCCCCCcccCCCcCcchHH
Confidence 246789999999999999999999854432 2321 1247999999999995
No 36
>TIGR03607 patatin-related protein. This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.
Probab=99.89 E-value=8.3e-23 Score=186.33 Aligned_cols=200 Identities=19% Similarity=0.283 Sum_probs=132.0
Q ss_pred EEEEeeCCchhhHHHHHHHHHHHHHhhhcC------------------------CCCCccccccceeeecCHHHHHHHHh
Q 027230 13 TVLSIDGGGVKGIIPGTILAFLESRLQDLD------------------------GPNARIADYFDIVAGTSTGGLIGTML 68 (226)
Q Consensus 13 ~iL~LdGGG~rG~~~~gvL~~L~~~~~~~~------------------------g~~~~~~~~fd~i~GtS~Gai~a~~l 68 (226)
-.|+|.|||++++|+.||+++|.+..+... +...+....||+|+|||+|||||+++
T Consensus 4 lalVl~GG~slA~y~~GV~~ei~~l~~~~~~~~~~~~~~~~~~~~~Y~~l~~~l~~~~~~~~~~d~iaGTSAGAInaa~l 83 (739)
T TIGR03607 4 LALVMYGGVSLAVYMHGVTKEINRLVRASRAYHGYPDEASAGTEAVYGALLELLGAHLRLRVRVDVISGTSAGGINGVLL 83 (739)
T ss_pred EEEEecCcHHHHHHHHHHHHHHHHHhhhhcccccccccccccchhHHHHHHHHhhhhhccCCCCceEEeeCHHHHHHHHH
Confidence 369999999999999999999977554321 11124568899999999999999999
Q ss_pred cCCCCCCCccccHHHHHHHHHhhCC--CCcCCCccCCchhHHHHhhhccccccCCChHHHHHHHHHHhccc------chh
Q 027230 69 TAPNKDGRPMYAAKDINNFYFEHCP--KIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDI------TIK 140 (226)
Q Consensus 69 ~~~~~~~~~~~s~~~~~~~~~~~~~--~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~------~l~ 140 (226)
+++.. ..++.+++.++|.+... +.+...... ..+. .-..+.|+++.++++|++.++.. ++.
T Consensus 84 A~~~~---~g~~~~~L~~~W~~~~d~~~lLd~~~~~-------~~~~-~~~~sLl~G~~l~~~L~~~L~~~~~~~~~~~~ 152 (739)
T TIGR03607 84 AYALA---YGADLDPLRDLWLELADIDALLRPDAKA-------WPRL-RRPGSLLDGEYFLPLLLDALAAMVRAGPAGPS 152 (739)
T ss_pred Hcccc---cCCCHHHHHHHHHhcccHHhhcChhhhc-------cccc-cCCccccccHHHHHHHHHHHHHhCCCCCCCcc
Confidence 98431 12678899998887643 222221100 0000 01234588899999999998753 344
Q ss_pred hhc-----CceEEEEeecCCCcceEe-eccc--------------hhh---hhc----CCCCCchHHHHHhHhccCCCCC
Q 027230 141 DTL-----TNLIIPTFDIKRLQPVIF-SSND--------------ALQ---VKK----GALKNARLADICVGTSAAPTYL 193 (226)
Q Consensus 141 ~~~-----~~l~v~a~~~~~~~~~~f-~~~~--------------~~~---~~~----~~~~~~~l~~a~~ASsA~P~~F 193 (226)
+.. ..|+||+||+ .|+...+ .+.. .|. ... +......|+.|+|||||+|++|
T Consensus 153 ~lp~~~~~~dL~VTaTDl-~G~~~~l~dd~~~~~~e~~hr~~f~F~~~~~~~~~~~d~~~~~~~~lA~AaRaSaSfP~aF 231 (739)
T TIGR03607 153 LLPTGTRPLDLFVTATDL-RGRSTRLFDDDGTVVEEREHRGVFRFTEAGRAGGRLSDFDAANAPRLAFAARATASFPGAF 231 (739)
T ss_pred ccccCCCCccEEEEEEcC-CCcEEEeecCCCcccccccccceeeeecccCCCCCCccccccccHHHHHHHHHhcCCCccc
Confidence 443 5689999999 5554433 3311 120 011 1122378999999999999999
Q ss_pred CceeeeccC------------------------CCCC-CcccceeeecccccCCCC
Q 027230 194 PAHHFVTKD------------------------STTG-DTCSFDLIDGGVAANDPV 224 (226)
Q Consensus 194 ~p~~i~~~~------------------------~~~g-~~~~~~~iDGGv~~N~P~ 224 (226)
+|+++.+.+ .+.+ .....+|+|||+.+|.|.
T Consensus 232 ~Pv~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vDGGvldN~Pl 287 (739)
T TIGR03607 232 PPSRLAEIDDVLARRFLPWGGRDAFLHPDFPDYAELGTTPRPRYVVDGGVLDNRPF 287 (739)
T ss_pred CceehhhhhHHHHhccCCCCccccccccccccccccCCCccceEEeecccccCcch
Confidence 999764110 0011 124568999999999985
No 37
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=99.89 E-value=8.7e-23 Score=155.81 Aligned_cols=138 Identities=23% Similarity=0.333 Sum_probs=99.6
Q ss_pred EEeeCCchhhHHHHHHHHHHHHHhhhcCCCCCccccccceeeecCHHHHHHHHhcCCCCCCCccccHHHHHHHHHhhCCC
Q 027230 15 LSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFEHCPK 94 (226)
Q Consensus 15 L~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~~~~~ 94 (226)
|+|+|||+||++++|||++|+++ .+.+.||.++|||+||+++++++-. .-.
T Consensus 1 l~~~GGg~~~~~~~gvl~~l~~~---------~~~~~~~~~~G~SaGa~~~~~~~p~-------------~~~------- 51 (155)
T cd01819 1 LSFSGGGFRGMYHAGVLSALAER---------GLLDCVTYLAGTSGGAWVAATLYPP-------------SSS------- 51 (155)
T ss_pred CEEcCcHHHHHHHHHHHHHHHHh---------CCccCCCEEEEEcHHHHHHHHHhCh-------------hhh-------
Confidence 68999999999999999999886 3446899999999999999998710 000
Q ss_pred CcCCCccCCchhHHHHhhhccccccCCChHHHHHHHHHHhcccchhhhcCceEEEEeecCCCcceEeeccchhhhhcCCC
Q 027230 95 IFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDITIKDTLTNLIIPTFDIKRLQPVIFSSNDALQVKKGAL 174 (226)
Q Consensus 95 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~~~~~~l~v~a~~~~~~~~~~f~~~~~~~~~~~~~ 174 (226)
|+ ....+.+. ++...++.|.+|++.+++..++.. ..
T Consensus 52 --------------------------~~-~~~~~~~~--------~~~~~~~~i~~T~~~tG~~~~~~~---~~------ 87 (155)
T cd01819 52 --------------------------LD-NKPRQSLE--------EALSGKLWVSFTPVTAGENVLVSR---FV------ 87 (155)
T ss_pred --------------------------hh-hhhhhhhH--------HhcCCCeEEEEEEcCCCcEEEEec---cc------
Confidence 00 00011111 345678999999999999999876 22
Q ss_pred CCchHHHHHhHhccCCCCCCceeeecc--CCCCCCcccceeeecccccCCCCC
Q 027230 175 KNARLADICVGTSAAPTYLPAHHFVTK--DSTTGDTCSFDLIDGGVAANDPVI 225 (226)
Q Consensus 175 ~~~~l~~a~~ASsA~P~~F~p~~i~~~--~~~~g~~~~~~~iDGGv~~N~P~l 225 (226)
....++++++|||++|.+|+++.+... ...+++.+...|+|||+.+|+|..
T Consensus 88 ~~~~~~~av~aS~s~P~~f~~v~~~~~~~~~~~~~~~g~~lVDGG~~~~iP~~ 140 (155)
T cd01819 88 SKEELIRALFASGSWPSYFGLIPPAELYTSKSNLKEKGVRLVDGGVSNNLPAP 140 (155)
T ss_pred cchHHHHHHhHHhhhhhhcCCcccccccccccccccCCeEEeccceecCcCCc
Confidence 124689999999999999998765100 000111223589999999999975
No 38
>COG4667 Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=99.89 E-value=8.2e-23 Score=163.01 Aligned_cols=167 Identities=20% Similarity=0.219 Sum_probs=113.8
Q ss_pred CCeEEEEEeeCCchhhHHHHHHHHHHHHHhhhcCCCCCccccccceeeecCHHHHHHHHhcCCCCCCCccccHHHHHHHH
Q 027230 9 GKKITVLSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFY 88 (226)
Q Consensus 9 ~~~~~iL~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~ 88 (226)
......|+++|||+||++++|||.+++.. -..+||.|+||||||.+++.+.+.+ +.++.+-+. .|
T Consensus 8 ~~~kvaLV~EGGG~RgifTAGVLD~fl~a----------~~~~f~~~~GvSAGA~n~~aYls~Q----~gra~~~~~-~y 72 (292)
T COG4667 8 QPGKVALVLEGGGQRGIFTAGVLDEFLRA----------NFNPFDLVVGVSAGALNLVAYLSKQ----RGRARRVIV-EY 72 (292)
T ss_pred CCCcEEEEEecCCccceehHHHHHHHHHh----------ccCCcCeeeeecHhHHhHHHHhhcC----CchHHHHHH-Hh
Confidence 34567899999999999999999999842 1478999999999999999888763 223222222 23
Q ss_pred HhhCCCCcCCCccCCchhHHHHhhhccccccCCChHHHHHHHHHH---hcccchhhhcCceEEEEeecCCCcceEeeccc
Q 027230 89 FEHCPKIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEI---LEDITIKDTLTNLIIPTFDIKRLQPVIFSSND 165 (226)
Q Consensus 89 ~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~l~~~~~~l~v~a~~~~~~~~~~f~~~~ 165 (226)
... ++.|.. .+. ++ .++.++-+.+-+.+-+. |+..++.....+.++.+++..+++...+...
T Consensus 73 t~d-~ry~~~-------~~~----vr--~gn~~n~d~~~~~~~~~~~~fD~~tf~~~~~k~~~~~~~~~~g~~~~~~~~- 137 (292)
T COG4667 73 TTD-RRYFGP-------LSF----VR--GGNYFNLDWAFEETPQKLFPFDFDTFSQDKGKFFYMATCRQDGEAVYYFLP- 137 (292)
T ss_pred hcc-hhhcch-------hhh----hc--cCcccchHHHHhhccCcCCCccHHHHhcccCCeEEEEEeccCCccceeecc-
Confidence 221 122222 111 11 23344444433333222 2233455566789999999999887765541
Q ss_pred hhhhhcCCCCCchHHHHHhHhccCCCCCCceeeeccCCCCCCcccceeeecccccCCCC
Q 027230 166 ALQVKKGALKNARLADICVGTSAAPTYLPAHHFVTKDSTTGDTCSFDLIDGGVAANDPV 224 (226)
Q Consensus 166 ~~~~~~~~~~~~~l~~a~~ASsA~P~~F~p~~i~~~~~~~g~~~~~~~iDGGv~~N~P~ 224 (226)
.....-+++|||||+|+|-++++|++. .|+|||+.+..|+
T Consensus 138 ---------~~~~~m~viRASSaiPf~~~~V~i~G~----------~YlDGGIsdsIPv 177 (292)
T COG4667 138 ---------DVFNWLDVIRASSAIPFYSEGVEINGK----------NYLDGGISDSIPV 177 (292)
T ss_pred ---------cHHHHHHHHHHhccCCCCCCCeEECCE----------ecccCcccccccc
Confidence 124577999999999988899999865 7999999999986
No 39
>KOG2968 consensus Predicted esterase of the alpha-beta hydrolase superfamily (Neuropathy target esterase), contains cAMP-binding domains [General function prediction only]
Probab=99.89 E-value=5.7e-23 Score=185.10 Aligned_cols=165 Identities=23% Similarity=0.305 Sum_probs=125.9
Q ss_pred EEEEEeeCCchhhHHHHHHHHHHHHHhhhcCCCCCccccccceeeecCHHHHHHHHhcCCCCCCCccccHH-HHHHHHHh
Q 027230 12 ITVLSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAK-DINNFYFE 90 (226)
Q Consensus 12 ~~iL~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~-~~~~~~~~ 90 (226)
-..|+|.|||+||++|+|||++|+|. +.++|+|.|||.||+++++++...+ ...+. .+.++..+
T Consensus 839 aIgLVLGGGGARG~ahiGvl~ALeE~-----------GIPvD~VGGTSIGafiGaLYA~e~d----~~~v~~rak~f~~~ 903 (1158)
T KOG2968|consen 839 AIGLVLGGGGARGAAHIGVLQALEEA-----------GIPVDMVGGTSIGAFIGALYAEERD----LVPVFGRAKKFAGK 903 (1158)
T ss_pred eEEEEecCcchhhhhHHHHHHHHHHc-----------CCCeeeeccccHHHhhhhhhhccCc----chHHHHHHHHHHHH
Confidence 45699999999999999999999985 6789999999999999999996521 11111 11111111
Q ss_pred hCCCCcCCCccCCchhHHHHhhhccccccCCChHHHHHHHHHHhcccchhhhcCceEEEEeecCCCcceEeeccchhhhh
Q 027230 91 HCPKIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDITIKDTLTNLIIPTFDIKRLQPVIFSSNDALQVK 170 (226)
Q Consensus 91 ~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~~~~~~l~v~a~~~~~~~~~~f~~~~~~~~~ 170 (226)
+ . +++..+..+. .-..+.|.+..+..-+.+.|++..++|++.+.++.+||+.+....+.++
T Consensus 904 m--------s---siw~~llDLT-yP~tsmftGh~FNrsI~~~Fgd~~IEDlWi~yfciTTdIt~S~mriH~~------- 964 (1158)
T KOG2968|consen 904 M--------S---SIWRLLLDLT-YPITSMFTGHEFNRSIHSTFGDVLIEDLWIPYFCITTDITSSEMRVHRN------- 964 (1158)
T ss_pred H--------H---HHHHHHHhcc-ccchhccchhhhhhHHHHHhcccchhhhhheeeecccccchhhhhhhcC-------
Confidence 1 0 1221111111 1135678899999999999999999999999999999999888777666
Q ss_pred cCCCCCchHHHHHhHhccCCCCCCceeeeccCCCCCCcccceeeecccccCCCC
Q 027230 171 KGALKNARLADICVGTSAAPTYLPAHHFVTKDSTTGDTCSFDLIDGGVAANDPV 224 (226)
Q Consensus 171 ~~~~~~~~l~~a~~ASsA~P~~F~p~~i~~~~~~~g~~~~~~~iDGGv~~N~P~ 224 (226)
..+|..+|||+++-+|.||..-..+ | ..++|||.++|.|+
T Consensus 965 ------G~~WrYvRASMsLaGylPPlcdp~d----G----hlLlDGGYvnNlPa 1004 (1158)
T KOG2968|consen 965 ------GSLWRYVRASMSLAGYLPPLCDPKD----G----HLLLDGGYVNNLPA 1004 (1158)
T ss_pred ------CchHHHHHhhccccccCCCCCCCCC----C----CEEecccccccCcH
Confidence 6799999999999999999874322 3 48999999999996
No 40
>KOG0513 consensus Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=99.73 E-value=8.4e-18 Score=148.11 Aligned_cols=218 Identities=40% Similarity=0.667 Sum_probs=170.0
Q ss_pred CCCCCCCeEEEEEeeCCchhhHHHHHHHHHHHHHhhhcCCCC--Cccccccce-eeecCHHHHHHHHhcCCCCCCCcccc
Q 027230 4 RTIAKGKKITVLSIDGGGVKGIIPGTILAFLESRLQDLDGPN--ARIADYFDI-VAGTSTGGLIGTMLTAPNKDGRPMYA 80 (226)
Q Consensus 4 ~~~~~~~~~~iL~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~--~~~~~~fd~-i~GtS~Gai~a~~l~~~~~~~~~~~s 80 (226)
.++..+...++|+|||||+||+.+.-.+..++.+++.+.|.. .++.++||+ +.|+++|+++++++-.....++|++.
T Consensus 27 ~~~~~~~~~~~lsld~gg~~gi~~~~s~~~~~~~l~~~~g~~~~~~~a~~fDv~~~g~~~~gl~~aml~a~~~~~~P~~~ 106 (503)
T KOG0513|consen 27 YDPSYGGLVTILSLDGGGSRGINQGVSLAYLELRLQNIDGDPSAARLADYFDVSIAGTNTGGLITAMLFAPNDCGRPRFG 106 (503)
T ss_pred CCccccccceEEEEcCccceehhhhhhhcccHHHHHhccCChHhhHhhhccCceeeccCCchhhhhhhhccccccCcccc
Confidence 456666789999999999999999999999999999999975 789999999 99999999999999999888899999
Q ss_pred HHHH-HHHHHhhCCCCcCCCccCCchhHHH-HhhhccccccCCCh------HHHHHHHHHHhcccchhhhcCc----eEE
Q 027230 81 AKDI-NNFYFEHCPKIFPQLSRGGNFLRSI-ISSLSKWVRPMYDG------KYIRSLTKEILEDITIKDTLTN----LII 148 (226)
Q Consensus 81 ~~~~-~~~~~~~~~~~f~~~~~~~~~~~~~-~~~~~~~~~~~~~~------~~l~~~l~~~~~~~~l~~~~~~----l~v 148 (226)
+.++ ..++.+.+..+|.+..-.....+.+ ..+.....+..++. .......++.+|+.++.++..+ +.|
T Consensus 107 a~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~~~~~~~g~t~L~~tl~~~~~~~~i 186 (503)
T KOG0513|consen 107 ATDILWKFNLEKAPKLLEKFDDPNFIKGDLNLALRILVSGDKYSGAEVLLTKYEIADAREVLGNTKLHLTLTKENLLVVI 186 (503)
T ss_pred ccchhhhhhhcCCCccccccccccccccccccceeeeecCccccceeecccccccchhhhhcCCceeeeeccCCCcceEE
Confidence 9999 8999998888887653100000000 01111122334444 5555566777888888888888 999
Q ss_pred EEeecCCCcceEeeccchhhhhcC---CCCCchHHHHHhHh--ccCCCCCCc-eeeeccCCCCCCcccceeeecc-cccC
Q 027230 149 PTFDIKRLQPVIFSSNDALQVKKG---ALKNARLADICVGT--SAAPTYLPA-HHFVTKDSTTGDTCSFDLIDGG-VAAN 221 (226)
Q Consensus 149 ~a~~~~~~~~~~f~~~~~~~~~~~---~~~~~~l~~a~~AS--sA~P~~F~p-~~i~~~~~~~g~~~~~~~iDGG-v~~N 221 (226)
++.+++...|.+|+. |....+ +.-+..+++.+.++ +|.|.+|+| +.+...+. .|......++||| +..|
T Consensus 187 ~~ldl~~~~P~lf~~---~~~~~~~~v~~~~~~~~~~c~~t~~sa~~~~f~~~~~~~~~Dg-~~~~~~~~~~~~g~~~m~ 262 (503)
T KOG0513|consen 187 PCLDLKSLTPNLFSI---YDALGTKIVPLLDFKAIDICIDTYGSAAPTIFPPILGFPSEDG-QGIKTVCVLLDGGDIAMN 262 (503)
T ss_pred EeeccCcCCceeeee---eccccccchhhhhhhhhhhhhccccccCccccCcccccccccc-cccceeeEEecchhhhcc
Confidence 999999999999999 766555 55567789999999 999999999 66665532 2333456799999 9999
Q ss_pred CCCC
Q 027230 222 DPVI 225 (226)
Q Consensus 222 ~P~l 225 (226)
||+.
T Consensus 263 n~t~ 266 (503)
T KOG0513|consen 263 NPTL 266 (503)
T ss_pred CchH
Confidence 9964
No 41
>KOG2214 consensus Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=99.71 E-value=3.5e-17 Score=140.91 Aligned_cols=182 Identities=18% Similarity=0.282 Sum_probs=127.1
Q ss_pred eEEEEEeeCCchhhHHHHHHHHHHHHHhhhcCCCCCccccccceeeecCHHHHHHHHhcCCCCCCCccccHHHHHHHHHh
Q 027230 11 KITVLSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFE 90 (226)
Q Consensus 11 ~~~iL~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~ 90 (226)
+..+|+|+||+.-|++|+|||+.|.++ .-.+.+|+|+|+|||+|++++.. +-+|+..++..
T Consensus 173 GrTAL~LsGG~tFGlfH~GVlrtL~e~-----------dLlP~IIsGsS~GaivAsl~~v~--------~~eEl~~Ll~~ 233 (543)
T KOG2214|consen 173 GRTALILSGGATFGLFHIGVLRTLLEQ-----------DLLPNIISGSSAGAIVASLVGVR--------SNEELKQLLTN 233 (543)
T ss_pred CceEEEecCCchhhhhHHHHHHHHHHc-----------cccchhhcCCchhHHHHHHHhhc--------chHHHHHHhcc
Confidence 468999999999999999999999875 23468999999999999999975 45677666655
Q ss_pred hCC---CCcCCCccCCchhHHHHhhhccccccCCChHHHHHHHHHHhcccchhhhc----CceEEEEeecC-CCcceEee
Q 027230 91 HCP---KIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDITIKDTL----TNLIIPTFDIK-RLQPVIFS 162 (226)
Q Consensus 91 ~~~---~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~~~~----~~l~v~a~~~~-~~~~~~f~ 162 (226)
.-. .+|..+.. +++..+.+.+. .+..+|...+...+++.+++.++.+.. +-+-|++...+ .+.|.+..
T Consensus 234 ~~~~~~~if~dd~~--n~~~~ikr~~~--~G~~~Di~~l~~~~~~~~~~lTFqEAY~rTGrIlNItV~p~s~~e~P~lLN 309 (543)
T KOG2214|consen 234 FLHSLFNIFQDDLG--NLLTIIKRYFT--QGALFDISHLACVMKKRLGNLTFQEAYDRTGRILNIVVPPSSKSEPPRLLN 309 (543)
T ss_pred chHhhhhhhcCcch--hHHHHHHHHHh--cchHHHHHHHHHHHHHHhcchhHHHHHHhhCceEEEEECccccCCChhHhh
Confidence 322 34555442 23333333322 356789999999999999988887653 22334444333 24666654
Q ss_pred ccchhhhhcCCCCCchHHHHHhHhccCCCCCCceeeeccCCCCCCc-------ccceeeecccccCCCC
Q 027230 163 SNDALQVKKGALKNARLADICVGTSAAPTYLPAHHFVTKDSTTGDT-------CSFDLIDGGVAANDPV 224 (226)
Q Consensus 163 ~~~~~~~~~~~~~~~~l~~a~~ASsA~P~~F~p~~i~~~~~~~g~~-------~~~~~iDGGv~~N~P~ 224 (226)
. +. .+++-+|.||.||||.|++|++..+-.++. .|+. ....+.||.+-..+|-
T Consensus 310 y---lT-----aPnVLIWSAV~aScs~pgif~~~~Ll~Kd~-t~ei~p~~~~~~~~r~~dgsl~~d~P~ 369 (543)
T KOG2214|consen 310 Y---LT-----APNVLIWSAVCASCSVPGIFESTPLLAKDL-TNEIEPFIVTFSEPRFMDGSLDNDLPY 369 (543)
T ss_pred c---cC-----CCceehhHHHHHhcccccccCccHHHHhhc-cCcEeeccCCccchhhccCcccccCcH
Confidence 4 33 357899999999999999999877655542 2211 1235789988887773
No 42
>KOG3773 consensus Adiponutrin and related vesicular transport proteins; predicted alpha/beta hydrolase [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.42 E-value=1.9e-13 Score=112.57 Aligned_cols=169 Identities=20% Similarity=0.194 Sum_probs=123.6
Q ss_pred EEEEEeeCCchhhHHHHHHHHHHHHHhhhcCCCCCccccccce-eeecCHHHHHHHHhcCCCCCCCccccHHHHHHHHHh
Q 027230 12 ITVLSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDI-VAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFE 90 (226)
Q Consensus 12 ~~iL~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~-i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~ 90 (226)
...||++|-|..|+||.|+-+.+-+...++ .-|. |.|.|+|+++|..+..+ .+.+++.....+
T Consensus 6 r~~lSfsg~gFlg~yh~gaa~~l~~~ap~l---------l~~~~~~GaSagsl~a~~ll~~-------~~l~~a~~~l~~ 69 (354)
T KOG3773|consen 6 RMNLSFSGCGFLGIYHVGAANCLPRHAPRL---------LKDRSIAGASAGSLVACDLLCG-------LSLEEATGELYK 69 (354)
T ss_pred hhheeecCCceeEEEecchHHHHHHHHHHH---------hccccccCcccchHHHhhhhcc-------ccHHHHHHHHHH
Confidence 367999999999999999998887765432 1244 89999999999999887 456776655544
Q ss_pred hCCCCcCCCccCCchhHHHHhhhccccccCCChHHHHHHHHHHhcccchhhhcCceEEEEeecCCCcceEeeccchhhhh
Q 027230 91 HCPKIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDITIKDTLTNLIIPTFDIKRLQPVIFSSNDALQVK 170 (226)
Q Consensus 91 ~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~~~~~~l~v~a~~~~~~~~~~f~~~~~~~~~ 170 (226)
+..++-.+ .++....+....+.+++.+++.+..........++.|.-|...+++-++.+. |...
T Consensus 70 ~v~e~~~~-------------s~g~~tP~f~~~~~l~~~le~~LPpda~~la~~rl~iSlTr~~~~~N~lis~---F~s~ 133 (354)
T KOG3773|consen 70 MVDEARRK-------------SLGAFTPGFNLSDRLRSGLEDFLPPDAHWLASGRLHISLTRVKDRENVLISE---FPSR 133 (354)
T ss_pred HHHHHHHh-------------hcCCCCCCcCHHHHHHHHHHHhCChHHHHHhhcceeEEEEeeeehhhhhhhc---cccH
Confidence 43332111 1222233445578899999998887655556678999999999988777777 6543
Q ss_pred cCCCCCchHHHHHhHhccCCCCCCceeeeccCCCCCCcccceeeecccccCCCCCC
Q 027230 171 KGALKNARLADICVGTSAAPTYLPAHHFVTKDSTTGDTCSFDLIDGGVAANDPVIN 226 (226)
Q Consensus 171 ~~~~~~~~l~~a~~ASsA~P~~F~p~~i~~~~~~~g~~~~~~~iDGGv~~N~P~l~ 226 (226)
..|.||+++||=+|.|-+-.. +..+...|||||+.+|.|.+|
T Consensus 134 ------~~liq~L~~scyiP~ysg~~p--------p~~rg~~yiDGg~snnlP~~~ 175 (354)
T KOG3773|consen 134 ------DELIQALMCSCYIPMYSGLKP--------PIFRGVRYIDGGTSNNLPEAD 175 (354)
T ss_pred ------HHHHHHHHHhccCccccCCCC--------cceeeEEEecccccccccccC
Confidence 479999999999999885221 122335899999999999875
No 43
>KOG0513 consensus Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=99.15 E-value=2.6e-11 Score=107.36 Aligned_cols=166 Identities=22% Similarity=0.336 Sum_probs=115.3
Q ss_pred eEEEEEeeCCchhhHHHHHHHHHHHHHhhhcCCCCCccccccceeeecCHHHHHHHHhcCCCCCCCccccHHHHHHHHHh
Q 027230 11 KITVLSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFE 90 (226)
Q Consensus 11 ~~~iL~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~ 90 (226)
...++..+|||++ ...+|-.++++... ....+||.+.|||+|+++++-+... -+.+.+...|..
T Consensus 293 ~~~lv~~~G~G~~---~~q~l~~~e~~~~~------a~~~~f~w~~gtstg~~~~~~i~~~-------~s~d~v~~~y~~ 356 (503)
T KOG0513|consen 293 DDNLVLSDGGGIP---IIQVLYWIEKRCGT------AAWGYFDWFNGTSTGSTIMADIALD-------GSSDEVDRMYLQ 356 (503)
T ss_pred cceEEEecCCCCh---hHHHHHhHHHhccc------ccccccccccccCcCceeehhhhhc-------ccHHHHHHHHHH
Confidence 4678899999999 55566666665321 3568999999999999999988876 467888888888
Q ss_pred hCCCCcCCCccCCchhHHHHhhhccccccCCChHHHHHHHHHHhcccchhhhcC-ceEEEEeec--CCCcceEeeccchh
Q 027230 91 HCPKIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSLTKEILEDITIKDTLT-NLIIPTFDI--KRLQPVIFSSNDAL 167 (226)
Q Consensus 91 ~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~~~~~-~l~v~a~~~--~~~~~~~f~~~~~~ 167 (226)
....+|... .+.|+..+++.++...+|...+.|... ++.|+.... .-.+...+++ |
T Consensus 357 ~k~~~F~~~------------------r~~~~~~~Ie~~~~~~~G~~~~~di~~~~~nl~~~~~~~~~~~l~~~rn---~ 415 (503)
T KOG0513|consen 357 MKDVVFDGL------------------RSEYNYVRIECAIDRLFGDAPSMDIDGIRLNLTGLLVDITGEELLMARN---Y 415 (503)
T ss_pred HhHHhhhcc------------------cCCCCccchhhhhhcccCccccccCCcchhhhhhhhccccHHHHHHhhc---c
Confidence 777777653 245788888888888888765555443 333333222 1111222222 2
Q ss_pred hhh----------------cCCCCCchHHHHHhHhccCCCCCCceeeeccCCCCCCcccceeeecccccCCCCCC
Q 027230 168 QVK----------------KGALKNARLADICVGTSAAPTYLPAHHFVTKDSTTGDTCSFDLIDGGVAANDPVIN 226 (226)
Q Consensus 168 ~~~----------------~~~~~~~~l~~a~~ASsA~P~~F~p~~i~~~~~~~g~~~~~~~iDGGv~~N~P~l~ 226 (226)
... ........+|++.|.|+++|..|++.. + .|+|||...|||++|
T Consensus 416 ~~~i~~~~~~~~~~snde~~~~~~~~l~we~~rrss~a~~~f~~~~--------~-----~~~d~~~~~~n~~ld 477 (503)
T KOG0513|consen 416 RHNINGGKPRSEEVSNDEALEEPAMQLVWEAKRRSSRAPPTFPPSE--------G-----KFIDGGLIANNPALD 477 (503)
T ss_pred ccccccccccccccccchhhhhHHHHHHHHHHHhccCCCCcccccc--------c-----ceeecCccCCCcchh
Confidence 110 011223568999999999999999874 2 699999999999986
No 44
>cd00147 cPLA2_like Cytosolic phospholipase A2, catalytic domain; hydrolyses arachidonyl phospholipids. Catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms. Movement of the cPLA2 lid possibly exposes a greater hydrophobic surface and the active site. cPLA2 belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Calcium is required for cPLA2 to bind with membranes or phospholipids. Group IV cPLA2 includes six intercellular enzymes: cPLA2alpha, cPLA2beta, cPLA2gamma, cPLA2delta, cP
Probab=98.09 E-value=6.1e-06 Score=72.51 Aligned_cols=53 Identities=17% Similarity=0.294 Sum_probs=44.2
Q ss_pred CeEEEEEeeCCchhh-HHHHHHHHHHHHHhhhcCCCCCccccccceeeecCHHHHH-HHHhcCC
Q 027230 10 KKITVLSIDGGGVKG-IIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLI-GTMLTAP 71 (226)
Q Consensus 10 ~~~~iL~LdGGG~rG-~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~-a~~l~~~ 71 (226)
.+...|+++|||.|+ +.++|+|++|.+. .+.+.+++|+|+|.|+.+ +.+++.+
T Consensus 41 ~p~i~~~~sGGG~Ra~~~~~G~l~~l~~~---------gll~~~~yisg~Sgg~w~~~~~~~~~ 95 (438)
T cd00147 41 VPVIAILGSGGGYRAMTGGAGALKALDEG---------GLLDCVTYLSGLSGSTWLMASLYSNP 95 (438)
T ss_pred CceEEEEecCchHHHHHhhhHHHHHHHhC---------CchhccceeeeccchHHHHHHHHHcC
Confidence 357789999999999 7999999999883 578899999999999954 4555544
No 45
>cd07202 cPLA2_Grp-IVC Group IVC cytoplasmic phospholipase A2; catalytic domain; Ca-independent. Group IVC cPLA2, a small 61 kDa protein, is a single domain alpha/beta hydrolase. It lacks a C2 domain; therefore, it has no Ca-dependence. Group IVC cPLA2 is also referred to as cPLA2-gamma. The cPLA2-gamma enzyme is predominantly found in cardiac and skeletal muscles, and to a lesser extent in the brain. Human cPLA2-gamma is approximately 30% identical to cPLA2-alpha. The catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms. Movement of the cPLA2 lid possibly exposes a greater hydrophobic surface and the active site. cPLA2 be
Probab=96.64 E-value=0.0018 Score=56.43 Aligned_cols=54 Identities=19% Similarity=0.230 Sum_probs=44.4
Q ss_pred CCeEEEEEeeCCchhhH-HHHHHHHHHHHHhhhcCCCCCccccccceeeecCHHHHHHHHhcCC
Q 027230 9 GKKITVLSIDGGGVKGI-IPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAP 71 (226)
Q Consensus 9 ~~~~~iL~LdGGG~rG~-~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~ 71 (226)
..+...|+++|||.|.+ ..+|+|+++.+. .+.+...+++|.|.|+.....|...
T Consensus 37 ~~P~i~ia~SGGG~RAm~~~~G~l~al~~~---------GLl~~~tY~sglSGgsWl~~sLy~n 91 (430)
T cd07202 37 KAPVIAVLGSGGGLRAMIACLGVLSELDKA---------GLLDCVTYLAGVSGSTWCMSSLYTE 91 (430)
T ss_pred cCCeEEEEecCccHHHHHhccHHHHHhhhC---------ChhhhhhhhccccchHHHHHHHHhc
Confidence 33567899999999995 889999999874 5788999999999999885555543
No 46
>cd07201 cPLA2_Grp-IVB-IVD-IVE-IVF Group IVB, IVD, IVE, and IVF cytosolic phospholipase A2; catalytic domain; Ca-dependent. Group IVB, IVD, IVE, and IVF cPLA2 consists of two domains: the regulatory C2 domain and alpha/beta hydrolase PLA2 domain. Group IVB, IVD, IVE, and IVF cPLA2 are also referred to as cPLA2-beta, -delta, -epsilon, and -zeta respectively. cPLA2-beta is approximately 30% identical to cPLA2-alpha and it shows low enzymatic activity compared to cPLA2alpha. cPLA2-beta hydrolyzes palmitic acid from 1-[14C]palmitoyl-2-arachidonoyl-PC and arachidonic acid from 1-palmitoyl-2[14C]arachidonoyl-PC, but not from 1-O-alkyl-2[3H]arachidonoyl-PC. cPLA2-delta, -epsilon, and -zeta are approximately 45-50% identical to cPLA2-beta and 31-37% identical to cPLA2-alpha. It's possible that cPLA2-beta, -delta, -epsilon, and -zeta may have arisen by gene duplication from an ancestral gene. The catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bon
Probab=95.66 E-value=0.018 Score=51.76 Aligned_cols=53 Identities=17% Similarity=0.174 Sum_probs=43.0
Q ss_pred CeEEEEEeeCCchhhH-HHHHHHHHHHHHhhhcCCCCCccccccceeeecCHHHHHHHHhcCC
Q 027230 10 KKITVLSIDGGGVKGI-IPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAP 71 (226)
Q Consensus 10 ~~~~iL~LdGGG~rG~-~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~ 71 (226)
.+...++++|||.|.+ ..+|+|.++.+. .+.+...+++|.|.|+-....|...
T Consensus 52 ~P~Igia~SGGGyRAml~gaG~l~al~~~---------GLLq~~tYlaGlSGg~Wl~gSLy~n 105 (541)
T cd07201 52 VPVVAVMTTGGGTRALTSMYGSLLGLQKL---------GLLDCVSYITGLSGSTWTMATLYED 105 (541)
T ss_pred CCeEEEEecCccHHHHHhccHHHHhhhcC---------CchhhhheecccCccHHHHHHHHcC
Confidence 3567899999999996 678999999652 5788999999999999995555543
No 47
>PF01735 PLA2_B: Lysophospholipase catalytic domain; InterPro: IPR002642 This family consists of lysophospholipase / phospholipase B 3.1.1.5 from EC and cytosolic phospholipase A2 which also has a C2 domain IPR000008 from INTERPRO. Phospholipase B enzymes catalyse the release of fatty acids from lysophsopholipids and are capable in vitro of hydrolyzing all phospholipids extractable from yeast cells []. Cytosolic phospholipase A2 associates with natural membranes in response to physiological increases in Ca2+ and selectively hydrolyses arachidonyl phospholipids [], the aligned region corresponds the carboxy-terminal Ca2+-independent catalytic domain of the protein as discussed in [].; GO: 0004620 phospholipase activity, 0009395 phospholipid catabolic process; PDB: 1CJY_B.
Probab=94.91 E-value=0.035 Score=50.08 Aligned_cols=58 Identities=21% Similarity=0.324 Sum_probs=35.5
Q ss_pred EEEeeCCchhhH-HHHHHHHHHHHHhhhcCCCCCccccccceeeecCHHHHHHHHhcCCC
Q 027230 14 VLSIDGGGVKGI-IPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPN 72 (226)
Q Consensus 14 iL~LdGGG~rG~-~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~ 72 (226)
.|+++|||.|.+ +.+|+|.+|..|-..-. ..-.+.+..++++|.|.|+-....|+..+
T Consensus 2 aia~SGGG~RAml~gaG~l~Ald~R~~~~~-~~gGLLq~~tY~sGlSGgsW~~~sl~~~n 60 (491)
T PF01735_consen 2 AIAGSGGGYRAMLAGAGVLSALDSRNPGAN-GTGGLLQCATYISGLSGGSWLVGSLYSNN 60 (491)
T ss_dssp EEEE---HHHHHHHHHHHHHHHH---------HCS-GGGECEEEE-HHHHHHHHHH----
T ss_pred eEEecCchHHHHHHHHHHHHHhhhhccccc-cccchhhhhhhhhhcCcchhhhhhhhhcc
Confidence 589999999995 77899999985533211 01258899999999999999887776543
No 48
>KOG1325 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=94.46 E-value=0.038 Score=49.96 Aligned_cols=61 Identities=21% Similarity=0.357 Sum_probs=45.8
Q ss_pred CeEEEEEeeCCchhhHH-HHHHHHHHHHHhhhcCCCCCccccccceeeecCHHHHHHHHhcCCC
Q 027230 10 KKITVLSIDGGGVKGII-PGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPN 72 (226)
Q Consensus 10 ~~~~iL~LdGGG~rG~~-~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~ 72 (226)
-++..++.+|||.|.+. -.|+|.+|.++...- + --.+.+..++++|.|.|+-.-.-|+..+
T Consensus 47 ~P~vaIa~SGGG~RAMl~g~G~Laamder~~~~-~-l~GLLqs~tYlaGlSGstW~vssLa~nn 108 (571)
T KOG1325|consen 47 GPVVGIAGSGGGLRAMLSGAGALAAMDERTDNA-G-LGGLLQSATYLAGLSGGSWLVSSLAVNN 108 (571)
T ss_pred CCeEEEEecCCCHHHHhhhhHHHHHHHhhccCC-c-ccchhhhhhhhcccCCCceeeeeeEECC
Confidence 46778999999999974 569999998862210 0 0147788999999999998777777653
No 49
>smart00022 PLAc Cytoplasmic phospholipase A2, catalytic subunit. Cytosolic phospholipases A2 hydrolyse arachidonyl phospholipids. Family includes phospholipases B isoforms.
Probab=94.23 E-value=0.07 Score=48.57 Aligned_cols=61 Identities=20% Similarity=0.318 Sum_probs=47.6
Q ss_pred CeEEEEEeeCCchhhH-HHHHHHHHHHHHhhhcCCCCCccccccceeeecCHHHHHHHHhcCCC
Q 027230 10 KKITVLSIDGGGVKGI-IPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPN 72 (226)
Q Consensus 10 ~~~~iL~LdGGG~rG~-~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~ 72 (226)
.+...|+++|||.|.+ ..+|+|.++.+|... .|. -.+.+...+++|.|.|+.+...|+..+
T Consensus 75 ~P~Igia~SGGGyRAml~gaG~l~ald~R~~~-~~l-gGLLq~~tYlaGlSGgsWlv~sl~~nn 136 (549)
T smart00022 75 VPVIAIAGSGGGFRAMVGGAGVLKAMDNRTDG-HGL-GGLLQSATYLAGLSGGTWLVGTLASNN 136 (549)
T ss_pred CceEEEEecCCCHHHHHhccHHHHHhhhcccc-ccc-ccHhhhhhhhhccchHHHHHHHHhhCC
Confidence 3567899999999996 778999999886322 110 157788899999999999988888664
No 50
>cd07203 cPLA2_Fungal_PLB Fungal Phospholipase B-like; cPLA2 GrpIVA homologs; catalytic domain. Fungal phospholipase B are Group IV cPLA2 homologs. Aspergillus PLA2 is Ca-dependent, yet it does not contain a C2 domain. PLB deacylates both sn-1 and sn-2 chains of phospholipids and are abundantly expressed in fungi. It shows lysophospholipase (lysoPL) and transacylase activities. The active site residues from cPLA2 are also conserved in PLB. Like cPLA2, PLB also has a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). It includes PLB1 from Schizosaccharomyces pombe, PLB2 from Candida glabrata, and PLB3 from Saccharomyces cerevisiae. PLB1, PLB2, and PLB3 show PLB and lysoPL activities; PLB3 is specific for phosphoinositides.
Probab=93.82 E-value=0.058 Score=48.88 Aligned_cols=62 Identities=16% Similarity=0.283 Sum_probs=46.5
Q ss_pred eEEEEEeeCCchhhH-HHHHHHHHHHHHhhhcCCCC-CccccccceeeecCHHHHHHHHhcCCC
Q 027230 11 KITVLSIDGGGVKGI-IPGTILAFLESRLQDLDGPN-ARIADYFDIVAGTSTGGLIGTMLTAPN 72 (226)
Q Consensus 11 ~~~iL~LdGGG~rG~-~~~gvL~~L~~~~~~~~g~~-~~~~~~fd~i~GtS~Gai~a~~l~~~~ 72 (226)
+...|+++|||-|.+ .-+|+|.++..|...-.... -.+.+...+++|.|.|+-+..-|+..+
T Consensus 63 P~Igia~SGGGyRAMl~GaG~l~AlD~Rt~~~~~~glgGLLQsatYlaGLSGGsWlvgSl~~Nn 126 (552)
T cd07203 63 PRIGIAVSGGGYRAMLTGAGAIAAMDNRTDNATEHGLGGLLQSSTYLSGLSGGSWLVGSLASNN 126 (552)
T ss_pred CeEEEEecCccHHHHHhccHHHHhhhcccccccccccccHHHHhhHhhhcCccchhhhhhhhCC
Confidence 567899999999996 66899999977632111000 157788899999999999887777664
No 51
>cd07200 cPLA2_Grp-IVA Group IVA cytosolic phospholipase A2; catalytic domain; Ca-dependent. Group IVA cPLA2, an 85 kDa protein, consists of two domains: the regulatory C2 domain and the alpha/beta hydrolase PLA2 domain. Group IVA cPLA2 is also referred to as cPLA2-alpha. The catalytic domain of cytosolic phospholipase A2 (cPLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms. Movement of the cPLA2 lid possibly exposes a greater hydrophobic surface and the active site. cPLA2 belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile
Probab=93.36 E-value=0.056 Score=48.55 Aligned_cols=53 Identities=21% Similarity=0.183 Sum_probs=42.9
Q ss_pred CeEEEEEeeCCchhhH-HHHHHHHHHHHHhhhcCCCCCccccccceeeecCHHHHHHHHhcCC
Q 027230 10 KKITVLSIDGGGVKGI-IPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAP 71 (226)
Q Consensus 10 ~~~~iL~LdGGG~rG~-~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~ 71 (226)
-+...|+++|||.|.+ .-+|+|.++.+- .+.+...+++|.|.|+-.-..|...
T Consensus 43 ~P~Iaia~SGGGyRAMl~gaG~l~Ald~g---------GLLq~aTYlaGLSGgsWlvgsl~~n 96 (505)
T cd07200 43 VPVIALLGSGGGFRAMVGMSGAMKALYDS---------GVLDCATYVAGLSGSTWYMSTLYSH 96 (505)
T ss_pred CCeEEEEecCccHHHHhhccHHHHhhhcC---------ChhhhhhhhhcCCccHHHHHHHHhC
Confidence 3567899999999996 668999999762 5789999999999999766555543
No 52
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=75.39 E-value=8.6 Score=31.94 Aligned_cols=32 Identities=19% Similarity=0.219 Sum_probs=22.9
Q ss_pred ccccceeeecCHHHHHHHHhcCCCCCCCccccHHHHHHH
Q 027230 49 ADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNF 87 (226)
Q Consensus 49 ~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~ 87 (226)
+..+|.++|.|.|-+.|+.++ |. ++.++..++
T Consensus 80 Gi~p~~~~GhSlGE~aA~~~a-g~------~~~~~~l~l 111 (298)
T smart00827 80 GVRPDAVVGHSLGEIAAAYVA-GV------LSLEDAARL 111 (298)
T ss_pred CCcccEEEecCHHHHHHHHHh-CC------CCHHHHHHH
Confidence 456799999999999887765 32 555555443
No 53
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=75.36 E-value=7.8 Score=32.77 Aligned_cols=32 Identities=19% Similarity=0.128 Sum_probs=23.7
Q ss_pred ccccceeeecCHHHHHHHHhcCCCCCCCccccHHHHHHH
Q 027230 49 ADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNF 87 (226)
Q Consensus 49 ~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~ 87 (226)
+..+|.++|.|.|-+.|+..+ |. ++.++...+
T Consensus 82 Gi~P~~v~GhSlGE~aA~~aa-G~------ls~e~a~~l 113 (318)
T PF00698_consen 82 GIKPDAVIGHSLGEYAALVAA-GA------LSLEDALRL 113 (318)
T ss_dssp THCESEEEESTTHHHHHHHHT-TS------SSHHHHHHH
T ss_pred ccccceeeccchhhHHHHHHC-Cc------cchhhhhhh
Confidence 467899999999998877554 43 666665544
No 54
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=73.45 E-value=5 Score=31.41 Aligned_cols=18 Identities=33% Similarity=0.595 Sum_probs=16.3
Q ss_pred ceeeecCHHHHHHHHhcC
Q 027230 53 DIVAGTSTGGLIGTMLTA 70 (226)
Q Consensus 53 d~i~GtS~Gai~a~~l~~ 70 (226)
.+++|+|.||..|..|+.
T Consensus 61 ~~liGSSlGG~~A~~La~ 78 (187)
T PF05728_consen 61 VVLIGSSLGGFYATYLAE 78 (187)
T ss_pred eEEEEEChHHHHHHHHHH
Confidence 689999999999999873
No 55
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=70.72 E-value=13 Score=30.63 Aligned_cols=31 Identities=16% Similarity=0.089 Sum_probs=22.8
Q ss_pred cccceeeecCHHHHHHHHhcCCCCCCCccccHHHHHHH
Q 027230 50 DYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNF 87 (226)
Q Consensus 50 ~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~ 87 (226)
..+|.++|.|.|-+.|+.++-- ++.++..++
T Consensus 82 i~p~~v~GhS~GE~aAa~~aG~-------ls~eda~~l 112 (290)
T TIGR00128 82 LKPDFAAGHSLGEYSALVAAGA-------LDFETALKL 112 (290)
T ss_pred CCCCEEeecCHHHHHHHHHhCC-------CCHHHHHHH
Confidence 5679999999999877776533 566665544
No 56
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=69.63 E-value=5.8 Score=32.23 Aligned_cols=15 Identities=20% Similarity=0.127 Sum_probs=12.2
Q ss_pred ceeeecCHHHHHHHH
Q 027230 53 DIVAGTSTGGLIGTM 67 (226)
Q Consensus 53 d~i~GtS~Gai~a~~ 67 (226)
-.++|+||||+++.-
T Consensus 114 ~~~~G~SAGAii~~~ 128 (233)
T PRK05282 114 TPYIGWSAGANVAGP 128 (233)
T ss_pred CEEEEECHHHHhhhc
Confidence 368999999998644
No 57
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=69.20 E-value=12 Score=29.99 Aligned_cols=19 Identities=32% Similarity=0.396 Sum_probs=16.7
Q ss_pred ceeeecCHHHHHHHHhcCC
Q 027230 53 DIVAGTSTGGLIGTMLTAP 71 (226)
Q Consensus 53 d~i~GtS~Gai~a~~l~~~ 71 (226)
-.|+|.|.||..|+.++..
T Consensus 117 ~~i~G~S~GG~~Al~~~l~ 135 (251)
T PF00756_consen 117 RAIAGHSMGGYGALYLALR 135 (251)
T ss_dssp EEEEEETHHHHHHHHHHHH
T ss_pred eEEeccCCCcHHHHHHHHh
Confidence 5999999999999988753
No 58
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=69.03 E-value=15 Score=30.58 Aligned_cols=32 Identities=19% Similarity=0.165 Sum_probs=23.2
Q ss_pred ccccceeeecCHHHHHHHHhcCCCCCCCccccHHHHHHH
Q 027230 49 ADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNF 87 (226)
Q Consensus 49 ~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~ 87 (226)
+..++.++|.|.|-+.|+..+.- ++.++..++
T Consensus 74 g~~P~~v~GhS~GE~aAa~~aG~-------~s~e~a~~l 105 (295)
T TIGR03131 74 LPRPSAVAGYSVGEYAAAVVAGV-------LTFDDALRL 105 (295)
T ss_pred CCCCcEEeecCHHHHHHHHHhCC-------CCHHHHHHH
Confidence 34689999999999888876543 566665543
No 59
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=66.99 E-value=9 Score=33.26 Aligned_cols=18 Identities=28% Similarity=0.363 Sum_probs=15.9
Q ss_pred eeeecCHHHHHHHHhcCC
Q 027230 54 IVAGTSTGGLIGTMLTAP 71 (226)
Q Consensus 54 ~i~GtS~Gai~a~~l~~~ 71 (226)
.++|.|.||.+|..++..
T Consensus 150 ~lvG~S~Gg~ia~~~a~~ 167 (379)
T PRK00175 150 AVVGGSMGGMQALEWAID 167 (379)
T ss_pred EEEEECHHHHHHHHHHHh
Confidence 799999999999888754
No 60
>PF03575 Peptidase_S51: Peptidase family S51; InterPro: IPR005320 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S51 (clan PC(S)). The type example being dipeptidase E (alpha-aspartyl dipeptidase) from Escherichia coli. The family contains alpha-aspartyl dipeptidases (dipeptidase E) and cyanophycinases. The three-dimensional structure of Salmonella typhimurium aspartyl dipeptidase, peptidase E has been determine at 1.2-A resolution. The structure of this 25kDa enzyme consists of two mixed beta-sheets forming a V, flanked by six alpha-helices. The active site contains a Ser-His-Glu catalytic triad and is the first example of a serine peptidase/protease with a glutamate in the catalytic triad. The active site Ser is located on a strand-helix motif reminiscent of that found in alpha/beta-hydrolases, but the polypeptide fold and the organisation of the catalytic triad differ from those of the known serine proteases. This enzyme appears to represent a new example of convergent evolution of peptidase activity []. Alpha-aspartyl dipeptidase hydrolyses dipeptides containing N-terminal aspartate residues, asp-|-xaa. It does not act on peptides with N-terminal Glu, Asn or Gln, nor does it cleave isoaspartyl peptides. In the cyanobacteria, cyanophycinase is an exopeptidase that catalyses the hydrolytic cleavage of multi-l-arginyl-poly-l-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3EN0_B 1FYE_A 1FY2_A 3L4E_A.
Probab=66.89 E-value=2.4 Score=31.86 Aligned_cols=13 Identities=38% Similarity=0.690 Sum_probs=11.1
Q ss_pred ceeeecCHHHHHH
Q 027230 53 DIVAGTSTGGLIG 65 (226)
Q Consensus 53 d~i~GtS~Gai~a 65 (226)
-+++|+||||++.
T Consensus 70 ~vi~G~SAGA~i~ 82 (154)
T PF03575_consen 70 GVIIGTSAGAMIL 82 (154)
T ss_dssp SEEEEETHHHHCT
T ss_pred CEEEEEChHHhhc
Confidence 3799999999884
No 61
>PF06361 RTBV_P12: Rice tungro bacilliform virus P12 protein; InterPro: IPR009417 This family consists of several Rice tungro bacilliform virus P12 proteins. The function of this family is unknown [].
Probab=66.32 E-value=3.2 Score=27.73 Aligned_cols=44 Identities=14% Similarity=0.309 Sum_probs=27.5
Q ss_pred chhhHHHHHHHHHHHHHhhhcCCCCCccccccceeeecCHHHHHHHH
Q 027230 21 GVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTM 67 (226)
Q Consensus 21 G~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~ 67 (226)
..+|+.++.+|+.+.+.+..+.. .+......-...|+|+|+-+.
T Consensus 46 askglvqlyalqeidkkinnl~a---qv~k~pttsgs~sagaivpag 89 (110)
T PF06361_consen 46 ASKGLVQLYALQEIDKKINNLSA---QVSKIPTTSGSSSAGAIVPAG 89 (110)
T ss_pred hhhhHHHHHHHHHHHhhhhhhHh---hhhcCccCCCCCCcceeeecC
Confidence 46899999999999887765332 122223333445677776543
No 62
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=63.78 E-value=24 Score=30.01 Aligned_cols=49 Identities=16% Similarity=0.132 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCccccccceeeecCHHHHHHHHhcCCCCCCCccccHHHHHHHHH
Q 027230 25 IIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYF 89 (226)
Q Consensus 25 ~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~ 89 (226)
+.++.+++.++++ .....+|+++|+|-|-..|+..+.- ++.++..++..
T Consensus 68 ~~s~a~~~~l~~~---------~~~~~p~~~aGHSlGEysAl~~ag~-------~~~ed~~~Lv~ 116 (310)
T COG0331 68 LVSLAAYRVLAEQ---------GLGVKPDFVAGHSLGEYSALAAAGV-------LSFEDALKLVR 116 (310)
T ss_pred HHHHHHHHHHHHh---------cCCCCCceeecccHhHHHHHHHccc-------ccHHHHHHHHH
Confidence 4556667777664 2257789999999998888776642 56666655544
No 63
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=58.78 E-value=34 Score=29.27 Aligned_cols=33 Identities=21% Similarity=0.220 Sum_probs=23.0
Q ss_pred cccceeeecCHHHHHHHHhcCCCCCCCccccHHHHHHHHH
Q 027230 50 DYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYF 89 (226)
Q Consensus 50 ~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~ 89 (226)
...|.++|.|.|-+.|+..+ |. ++.++..++..
T Consensus 123 ~~~~~~~GHSlGE~aA~~~A-G~------ls~e~al~lv~ 155 (343)
T PLN02752 123 DSVDVCAGLSLGEYTALVFA-GA------LSFEDGLKLVK 155 (343)
T ss_pred cCCCeeeeccHHHHHHHHHh-CC------CCHHHHHHHHH
Confidence 35688999999998887765 42 56666554433
No 64
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=58.52 E-value=12 Score=29.73 Aligned_cols=20 Identities=40% Similarity=0.511 Sum_probs=16.7
Q ss_pred ccceeeecCHHHHHHHHhcC
Q 027230 51 YFDIVAGTSTGGLIGTMLTA 70 (226)
Q Consensus 51 ~fd~i~GtS~Gai~a~~l~~ 70 (226)
.||-|.|-|-||.+|++|+.
T Consensus 102 PfdGvlGFSQGA~lAa~ll~ 121 (212)
T PF03959_consen 102 PFDGVLGFSQGAALAALLLA 121 (212)
T ss_dssp --SEEEEETHHHHHHHHHHH
T ss_pred CeEEEEeecHHHHHHHHHHH
Confidence 49999999999999998874
No 65
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=58.41 E-value=7.2 Score=28.20 Aligned_cols=17 Identities=29% Similarity=0.694 Sum_probs=14.9
Q ss_pred eeeecCHHHHHHHHhcC
Q 027230 54 IVAGTSTGGLIGTMLTA 70 (226)
Q Consensus 54 ~i~GtS~Gai~a~~l~~ 70 (226)
+++|.|.||-+|.+++.
T Consensus 67 ~itGHSLGGalA~l~a~ 83 (140)
T PF01764_consen 67 VITGHSLGGALASLAAA 83 (140)
T ss_dssp EEEEETHHHHHHHHHHH
T ss_pred hhhccchHHHHHHHHHH
Confidence 47899999999999873
No 66
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=57.58 E-value=29 Score=29.59 Aligned_cols=19 Identities=26% Similarity=0.338 Sum_probs=16.0
Q ss_pred ceeeecCHHHHHHHHhcCC
Q 027230 53 DIVAGTSTGGLIGTMLTAP 71 (226)
Q Consensus 53 d~i~GtS~Gai~a~~l~~~ 71 (226)
=.++|.|.||++|..++..
T Consensus 129 ~~l~G~S~Gg~ia~~~a~~ 147 (351)
T TIGR01392 129 AAVVGGSMGGMQALEWAID 147 (351)
T ss_pred eEEEEECHHHHHHHHHHHH
Confidence 3689999999999988754
No 67
>cd03129 GAT1_Peptidase_E_like Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E and, extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Peptidase E and cyanophycinases are thought to have a Ser-His-Glu catalytic triad which differs from
Probab=55.37 E-value=29 Score=27.35 Aligned_cols=15 Identities=27% Similarity=0.439 Sum_probs=13.2
Q ss_pred eeeecCHHHHHHHHh
Q 027230 54 IVAGTSTGGLIGTML 68 (226)
Q Consensus 54 ~i~GtS~Gai~a~~l 68 (226)
+++|+|+||++..-.
T Consensus 116 v~~G~SAGA~~~~~~ 130 (210)
T cd03129 116 VIGGTSAGAAVMGET 130 (210)
T ss_pred eEEEcCHHHHHhhhc
Confidence 799999999998764
No 68
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=54.86 E-value=15 Score=29.61 Aligned_cols=33 Identities=27% Similarity=0.500 Sum_probs=26.6
Q ss_pred HHHHHHHHhhhcCCCCCccccccceeeecCHHHHHHHHhcC
Q 027230 30 ILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTA 70 (226)
Q Consensus 30 vL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~ 70 (226)
.|++|++.+.+ .-.||=+.|-|=||.++++|+.
T Consensus 91 sl~yl~~~i~e--------nGPFDGllGFSQGA~laa~l~~ 123 (230)
T KOG2551|consen 91 SLEYLEDYIKE--------NGPFDGLLGFSQGAALAALLAG 123 (230)
T ss_pred HHHHHHHHHHH--------hCCCccccccchhHHHHHHhhc
Confidence 46777776654 3579999999999999999986
No 69
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=52.28 E-value=9.9 Score=29.52 Aligned_cols=17 Identities=29% Similarity=0.565 Sum_probs=14.9
Q ss_pred eeeecCHHHHHHHHhcC
Q 027230 54 IVAGTSTGGLIGTMLTA 70 (226)
Q Consensus 54 ~i~GtS~Gai~a~~l~~ 70 (226)
.++|.|+||-+|+.++.
T Consensus 74 ~l~G~SAGg~la~~~~~ 90 (211)
T PF07859_consen 74 VLIGDSAGGHLALSLAL 90 (211)
T ss_dssp EEEEETHHHHHHHHHHH
T ss_pred EEeecccccchhhhhhh
Confidence 38899999999999884
No 70
>PRK04940 hypothetical protein; Provisional
Probab=46.98 E-value=32 Score=26.83 Aligned_cols=19 Identities=16% Similarity=0.312 Sum_probs=16.6
Q ss_pred cceeeecCHHHHHHHHhcC
Q 027230 52 FDIVAGTSTGGLIGTMLTA 70 (226)
Q Consensus 52 fd~i~GtS~Gai~a~~l~~ 70 (226)
-..++|+|.||.-|..|+.
T Consensus 61 ~~~liGSSLGGyyA~~La~ 79 (180)
T PRK04940 61 RPLICGVGLGGYWAERIGF 79 (180)
T ss_pred CcEEEEeChHHHHHHHHHH
Confidence 3789999999999998874
No 71
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=43.91 E-value=17 Score=26.88 Aligned_cols=17 Identities=29% Similarity=0.442 Sum_probs=14.9
Q ss_pred eeeecCHHHHHHHHhcC
Q 027230 54 IVAGTSTGGLIGTMLTA 70 (226)
Q Consensus 54 ~i~GtS~Gai~a~~l~~ 70 (226)
+++|.|.||-+|.+++.
T Consensus 31 ~v~GHSlGg~lA~l~a~ 47 (153)
T cd00741 31 HVTGHSLGGALAGLAGL 47 (153)
T ss_pred EEEEcCHHHHHHHHHHH
Confidence 58999999999998873
No 72
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=42.11 E-value=33 Score=28.15 Aligned_cols=14 Identities=36% Similarity=0.510 Sum_probs=11.9
Q ss_pred ceeeecCHHHHHHH
Q 027230 53 DIVAGTSTGGLIGT 66 (226)
Q Consensus 53 d~i~GtS~Gai~a~ 66 (226)
-+++|+||||++..
T Consensus 117 ~vi~G~SAGA~i~~ 130 (250)
T TIGR02069 117 IILGGTSAGAAVMS 130 (250)
T ss_pred CeEEEccHHHHhcc
Confidence 47999999999873
No 73
>PF08250 Sperm_act_pep: Sperm-activating peptides; InterPro: IPR013254 The sperm-activating peptides (SAPs) are isolated in egg-conditioned media (egg jelly) of sea urchins. SAPs have several effects on sea urchin spermatozoa: stimulate sperm respiration and motility through intracellular alkalinization, transient elevation of cAMP, cGMP and Ca2+ levels in sperm cells [, ].
Probab=42.00 E-value=9.7 Score=14.93 Aligned_cols=7 Identities=71% Similarity=1.346 Sum_probs=4.9
Q ss_pred EeeCCch
Q 027230 16 SIDGGGV 22 (226)
Q Consensus 16 ~LdGGG~ 22 (226)
.|.|||+
T Consensus 3 ~l~GgGV 9 (10)
T PF08250_consen 3 SLGGGGV 9 (10)
T ss_pred ccccCcC
Confidence 5778775
No 74
>PRK06489 hypothetical protein; Provisional
Probab=38.94 E-value=34 Score=29.29 Aligned_cols=21 Identities=29% Similarity=0.439 Sum_probs=17.2
Q ss_pred ccceeeecCHHHHHHHHhcCC
Q 027230 51 YFDIVAGTSTGGLIGTMLTAP 71 (226)
Q Consensus 51 ~fd~i~GtS~Gai~a~~l~~~ 71 (226)
.+.+++|.|.||.+|..++..
T Consensus 154 ~~~~lvG~SmGG~vAl~~A~~ 174 (360)
T PRK06489 154 HLRLILGTSMGGMHAWMWGEK 174 (360)
T ss_pred ceeEEEEECHHHHHHHHHHHh
Confidence 344689999999999988754
No 75
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=38.54 E-value=32 Score=29.38 Aligned_cols=18 Identities=28% Similarity=0.425 Sum_probs=16.1
Q ss_pred eeeecCHHHHHHHHhcCC
Q 027230 54 IVAGTSTGGLIGTMLTAP 71 (226)
Q Consensus 54 ~i~GtS~Gai~a~~l~~~ 71 (226)
.++|.|.|+++|..+|+.
T Consensus 131 ~lvghS~Gg~va~~~Aa~ 148 (326)
T KOG1454|consen 131 SLVGHSLGGIVALKAAAY 148 (326)
T ss_pred EEEEeCcHHHHHHHHHHh
Confidence 488999999999999875
No 76
>PRK11071 esterase YqiA; Provisional
Probab=38.46 E-value=97 Score=23.92 Aligned_cols=19 Identities=32% Similarity=0.336 Sum_probs=16.4
Q ss_pred ceeeecCHHHHHHHHhcCC
Q 027230 53 DIVAGTSTGGLIGTMLTAP 71 (226)
Q Consensus 53 d~i~GtS~Gai~a~~l~~~ 71 (226)
-.++|.|.||.+|+.++..
T Consensus 63 ~~lvG~S~Gg~~a~~~a~~ 81 (190)
T PRK11071 63 LGLVGSSLGGYYATWLSQC 81 (190)
T ss_pred eEEEEECHHHHHHHHHHHH
Confidence 3789999999999988854
No 77
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=37.95 E-value=22 Score=28.27 Aligned_cols=17 Identities=41% Similarity=0.749 Sum_probs=15.1
Q ss_pred eeeecCHHHHHHHHhcC
Q 027230 54 IVAGTSTGGLIGTMLTA 70 (226)
Q Consensus 54 ~i~GtS~Gai~a~~l~~ 70 (226)
+++|.|.||-+|.+++.
T Consensus 131 ~vtGHSLGGaiA~l~a~ 147 (229)
T cd00519 131 IVTGHSLGGALASLLAL 147 (229)
T ss_pred EEEccCHHHHHHHHHHH
Confidence 58999999999998874
No 78
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=37.44 E-value=48 Score=29.08 Aligned_cols=22 Identities=23% Similarity=0.335 Sum_probs=18.4
Q ss_pred cccceeeecCHHHHHHHHhcCC
Q 027230 50 DYFDIVAGTSTGGLIGTMLTAP 71 (226)
Q Consensus 50 ~~fd~i~GtS~Gai~a~~l~~~ 71 (226)
..+.+++|.|.||.+|..++..
T Consensus 160 ~~~~~vvG~SmGG~ial~~a~~ 181 (389)
T PRK06765 160 ARLHAVMGPSMGGMQAQEWAVH 181 (389)
T ss_pred CCceEEEEECHHHHHHHHHHHH
Confidence 4567799999999999988854
No 79
>COG1647 Esterase/lipase [General function prediction only]
Probab=37.20 E-value=17 Score=29.48 Aligned_cols=18 Identities=33% Similarity=0.458 Sum_probs=16.1
Q ss_pred eeeecCHHHHHHHHhcCC
Q 027230 54 IVAGTSTGGLIGTMLTAP 71 (226)
Q Consensus 54 ~i~GtS~Gai~a~~l~~~ 71 (226)
.|+|-|.||+.++-|+..
T Consensus 88 ~v~GlSmGGv~alkla~~ 105 (243)
T COG1647 88 AVVGLSMGGVFALKLAYH 105 (243)
T ss_pred EEEeecchhHHHHHHHhh
Confidence 488999999999999865
No 80
>COG3150 Predicted esterase [General function prediction only]
Probab=36.37 E-value=52 Score=25.56 Aligned_cols=35 Identities=34% Similarity=0.442 Sum_probs=23.5
Q ss_pred HHHHHHHHHhhhcCCCCCccccccceeeecCHHHHHHHHhcC
Q 027230 29 TILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTA 70 (226)
Q Consensus 29 gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~ 70 (226)
-+++.|++.+.+. .+.--.|||+|-|+-.|.-|+.
T Consensus 44 ~a~~ele~~i~~~-------~~~~p~ivGssLGGY~At~l~~ 78 (191)
T COG3150 44 QALKELEKAVQEL-------GDESPLIVGSSLGGYYATWLGF 78 (191)
T ss_pred HHHHHHHHHHHHc-------CCCCceEEeecchHHHHHHHHH
Confidence 3456666655442 2223689999999999987763
No 81
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=35.19 E-value=56 Score=27.45 Aligned_cols=38 Identities=21% Similarity=0.191 Sum_probs=24.8
Q ss_pred HHHHHHHHHHhhhcCCCCCccccccceeeecCHHHHHHHHhcCC
Q 027230 28 GTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAP 71 (226)
Q Consensus 28 ~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~ 71 (226)
...|+.+.+.+.. +-....=++.|.|+||++++.++..
T Consensus 90 ~~dl~~~~~~~~~------~~~~~p~~l~gHSmGg~Ia~~~~~~ 127 (298)
T COG2267 90 VDDLDAFVETIAE------PDPGLPVFLLGHSMGGLIALLYLAR 127 (298)
T ss_pred HHHHHHHHHHHhc------cCCCCCeEEEEeCcHHHHHHHHHHh
Confidence 4555555554432 1123445799999999999988755
No 82
>PLN02571 triacylglycerol lipase
Probab=34.37 E-value=56 Score=29.02 Aligned_cols=17 Identities=24% Similarity=0.440 Sum_probs=15.0
Q ss_pred eeeecCHHHHHHHHhcC
Q 027230 54 IVAGTSTGGLIGTMLTA 70 (226)
Q Consensus 54 ~i~GtS~Gai~a~~l~~ 70 (226)
.|+|.|.||-+|++.+.
T Consensus 229 ~VTGHSLGGALAtLaA~ 245 (413)
T PLN02571 229 TICGHSLGAALATLNAV 245 (413)
T ss_pred EEeccchHHHHHHHHHH
Confidence 69999999999998773
No 83
>cd03145 GAT1_cyanophycinase Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. This group contains proteins similar to the extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Cyanophycinase is believed to be a serine-type exopeptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow.
Probab=34.14 E-value=24 Score=28.17 Aligned_cols=14 Identities=29% Similarity=0.539 Sum_probs=12.1
Q ss_pred eeeecCHHHHHHHH
Q 027230 54 IVAGTSTGGLIGTM 67 (226)
Q Consensus 54 ~i~GtS~Gai~a~~ 67 (226)
+++|+|+||++..-
T Consensus 119 v~~G~SAGA~i~~~ 132 (217)
T cd03145 119 VIGGTSAGAAVMSD 132 (217)
T ss_pred EEEEccHHHHhhhh
Confidence 69999999999764
No 84
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=32.60 E-value=28 Score=26.71 Aligned_cols=18 Identities=28% Similarity=0.416 Sum_probs=15.0
Q ss_pred eeeecCHHHHHHHHhcCC
Q 027230 54 IVAGTSTGGLIGTMLTAP 71 (226)
Q Consensus 54 ~i~GtS~Gai~a~~l~~~ 71 (226)
.+.|.|.||.+|..++..
T Consensus 73 ~l~G~S~Gg~ia~~~a~~ 90 (251)
T TIGR03695 73 FLVGYSMGGRIALYYALQ 90 (251)
T ss_pred EEEEeccHHHHHHHHHHh
Confidence 367999999999988754
No 85
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=32.50 E-value=58 Score=29.18 Aligned_cols=39 Identities=18% Similarity=0.364 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHhhhcCCCCCccccccceeeecCHHHHHHHHhcC
Q 027230 27 PGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTA 70 (226)
Q Consensus 27 ~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~ 70 (226)
+..+|+.+.+.+....|+.-++ .+.|.|+||..+.++..
T Consensus 157 ~~~al~wv~~~i~~fggd~~~v-----~~~G~SaG~~~~~~~~~ 195 (493)
T cd00312 157 QRLALKWVQDNIAAFGGDPDSV-----TIFGESAGGASVSLLLL 195 (493)
T ss_pred HHHHHHHHHHHHHHhCCCcceE-----EEEeecHHHHHhhhHhh
Confidence 3445566666665544432221 47899999998876654
No 86
>PRK10673 acyl-CoA esterase; Provisional
Probab=32.10 E-value=31 Score=27.31 Aligned_cols=18 Identities=39% Similarity=0.351 Sum_probs=15.4
Q ss_pred eeeecCHHHHHHHHhcCC
Q 027230 54 IVAGTSTGGLIGTMLTAP 71 (226)
Q Consensus 54 ~i~GtS~Gai~a~~l~~~ 71 (226)
.++|.|.||.+|..++..
T Consensus 84 ~lvGhS~Gg~va~~~a~~ 101 (255)
T PRK10673 84 TFIGHSMGGKAVMALTAL 101 (255)
T ss_pred EEEEECHHHHHHHHHHHh
Confidence 577999999999988754
No 87
>PF07812 TfuA: TfuA-like protein; InterPro: IPR012924 This domain consists of a group of sequences that are similar to the core of TfuA protein (Q52872 from SWISSPROT). This protein is involved in the production of trifolitoxin (TFX), a gene-encoded, post-translationally modified peptide antibiotic []. The role of TfuA in TFX synthesis is unknown, and it may be involved in other cellular processes [].
Probab=31.41 E-value=48 Score=23.99 Aligned_cols=48 Identities=21% Similarity=0.237 Sum_probs=32.5
Q ss_pred hHHHHHHHHHHHHHhhhcCCCCCccccccceeeecCHHHHHHHHhcCCCCCCCccccHHHHHHHHHh
Q 027230 24 GIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFE 90 (226)
Q Consensus 24 G~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~ 90 (226)
.++|-.||.+|.+ .+-++.+.|+||+=|+=|.... ....-++.+.|.+
T Consensus 9 aV~HkEIL~Al~~--------------Gv~V~GasSMGALRAaEl~~fG-----M~GvG~If~~Yr~ 56 (120)
T PF07812_consen 9 AVWHKEILWALSQ--------------GVRVFGASSMGALRAAELAPFG-----MIGVGRIFEWYRD 56 (120)
T ss_pred CccHHHHHHHHHC--------------CCEEEecccHHHHHHHHhHhcC-----CEeehHHHHHHhc
Confidence 3567677776643 3579999999999998776431 0234566677765
No 88
>PHA02857 monoglyceride lipase; Provisional
Probab=31.41 E-value=30 Score=27.98 Aligned_cols=18 Identities=22% Similarity=0.344 Sum_probs=15.2
Q ss_pred eeeecCHHHHHHHHhcCC
Q 027230 54 IVAGTSTGGLIGTMLTAP 71 (226)
Q Consensus 54 ~i~GtS~Gai~a~~l~~~ 71 (226)
.++|.|.||.+|..++..
T Consensus 100 ~lvG~S~GG~ia~~~a~~ 117 (276)
T PHA02857 100 FLLGHSMGATISILAAYK 117 (276)
T ss_pred EEEEcCchHHHHHHHHHh
Confidence 478999999999888754
No 89
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=31.10 E-value=70 Score=24.96 Aligned_cols=18 Identities=28% Similarity=0.414 Sum_probs=15.8
Q ss_pred cceeeecCHHHHHHHHhc
Q 027230 52 FDIVAGTSTGGLIGTMLT 69 (226)
Q Consensus 52 fd~i~GtS~Gai~a~~l~ 69 (226)
.=+++|.|.||++|.-++
T Consensus 67 p~~L~G~S~Gg~lA~E~A 84 (229)
T PF00975_consen 67 PYVLAGWSFGGILAFEMA 84 (229)
T ss_dssp SEEEEEETHHHHHHHHHH
T ss_pred CeeehccCccHHHHHHHH
Confidence 458999999999998777
No 90
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=30.85 E-value=88 Score=23.41 Aligned_cols=18 Identities=44% Similarity=0.693 Sum_probs=15.6
Q ss_pred eeeecCHHHHHHHHhcCC
Q 027230 54 IVAGTSTGGLIGTMLTAP 71 (226)
Q Consensus 54 ~i~GtS~Gai~a~~l~~~ 71 (226)
+++|.|.||.++..++..
T Consensus 69 ~lvG~S~Gg~~a~~~a~~ 86 (228)
T PF12697_consen 69 ILVGHSMGGMIALRLAAR 86 (228)
T ss_dssp EEEEETHHHHHHHHHHHH
T ss_pred cccccccccccccccccc
Confidence 688999999999988754
No 91
>PRK13604 luxD acyl transferase; Provisional
Probab=30.65 E-value=94 Score=26.44 Aligned_cols=18 Identities=11% Similarity=-0.095 Sum_probs=14.7
Q ss_pred ceeeecCHHHHHHHHhcC
Q 027230 53 DIVAGTSTGGLIGTMLTA 70 (226)
Q Consensus 53 d~i~GtS~Gai~a~~l~~ 70 (226)
-.+.|.|.||.+|.+.+.
T Consensus 110 I~LiG~SmGgava~~~A~ 127 (307)
T PRK13604 110 LGLIAASLSARIAYEVIN 127 (307)
T ss_pred eEEEEECHHHHHHHHHhc
Confidence 458899999999876664
No 92
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=30.56 E-value=34 Score=26.87 Aligned_cols=19 Identities=26% Similarity=0.326 Sum_probs=16.1
Q ss_pred ceeeecCHHHHHHHHhcCC
Q 027230 53 DIVAGTSTGGLIGTMLTAP 71 (226)
Q Consensus 53 d~i~GtS~Gai~a~~l~~~ 71 (226)
=.++|.|.||.+|..++..
T Consensus 68 ~~lvG~S~Gg~va~~~a~~ 86 (242)
T PRK11126 68 YWLVGYSLGGRIAMYYACQ 86 (242)
T ss_pred eEEEEECHHHHHHHHHHHh
Confidence 3578999999999998765
No 93
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=30.47 E-value=37 Score=24.10 Aligned_cols=17 Identities=47% Similarity=0.683 Sum_probs=14.7
Q ss_pred eeeecCHHHHHHHHhcC
Q 027230 54 IVAGTSTGGLIGTMLTA 70 (226)
Q Consensus 54 ~i~GtS~Gai~a~~l~~ 70 (226)
.+.|.|.||.++..++.
T Consensus 64 ~l~G~S~Gg~~a~~~~~ 80 (145)
T PF12695_consen 64 ILIGHSMGGAIAANLAA 80 (145)
T ss_dssp EEEEETHHHHHHHHHHH
T ss_pred EEEEEccCcHHHHHHhh
Confidence 58899999999988774
No 94
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=29.95 E-value=75 Score=26.93 Aligned_cols=18 Identities=28% Similarity=0.477 Sum_probs=15.8
Q ss_pred eeeecCHHHHHHHHhcCC
Q 027230 54 IVAGTSTGGLIGTMLTAP 71 (226)
Q Consensus 54 ~i~GtS~Gai~a~~l~~~ 71 (226)
.++|.|.||.+|..++..
T Consensus 141 ~lvG~SmGG~vA~~~A~~ 158 (343)
T PRK08775 141 AFVGYSYGALVGLQFASR 158 (343)
T ss_pred EEEEECHHHHHHHHHHHH
Confidence 589999999999988754
No 95
>PRK00536 speE spermidine synthase; Provisional
Probab=29.82 E-value=20 Score=29.68 Aligned_cols=21 Identities=29% Similarity=0.287 Sum_probs=14.7
Q ss_pred CCCCCC--CCCCeEEEEEeeCCc
Q 027230 1 MIARTI--AKGKKITVLSIDGGG 21 (226)
Q Consensus 1 ~~~~~~--~~~~~~~iL~LdGGG 21 (226)
|+.+|| ..+++.|||++.||=
T Consensus 61 mLvHppl~~h~~pk~VLIiGGGD 83 (262)
T PRK00536 61 LLAHMGGCTKKELKEVLIVDGFD 83 (262)
T ss_pred HHHHHHHhhCCCCCeEEEEcCCc
Confidence 455566 346678999998875
No 96
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=29.59 E-value=37 Score=26.39 Aligned_cols=17 Identities=24% Similarity=0.442 Sum_probs=14.9
Q ss_pred eeeecCHHHHHHHHhcC
Q 027230 54 IVAGTSTGGLIGTMLTA 70 (226)
Q Consensus 54 ~i~GtS~Gai~a~~l~~ 70 (226)
.+.|.|.||.++++++.
T Consensus 67 ~i~G~S~GG~~a~~~~~ 83 (213)
T PF00326_consen 67 GIMGHSYGGYLALLAAT 83 (213)
T ss_dssp EEEEETHHHHHHHHHHH
T ss_pred EEEcccccccccchhhc
Confidence 58899999999998875
No 97
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=29.54 E-value=34 Score=27.14 Aligned_cols=18 Identities=22% Similarity=0.390 Sum_probs=15.4
Q ss_pred eeeecCHHHHHHHHhcCC
Q 027230 54 IVAGTSTGGLIGTMLTAP 71 (226)
Q Consensus 54 ~i~GtS~Gai~a~~l~~~ 71 (226)
.++|.|.||.++..++..
T Consensus 99 ~liG~S~Gg~ia~~~a~~ 116 (288)
T TIGR01250 99 YLLGHSWGGMLAQEYALK 116 (288)
T ss_pred EEEEeehHHHHHHHHHHh
Confidence 577999999999988754
No 98
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=29.08 E-value=1.2e+02 Score=33.70 Aligned_cols=21 Identities=29% Similarity=0.211 Sum_probs=17.3
Q ss_pred ccccceeeecCHHHHHHHHhc
Q 027230 49 ADYFDIVAGTSTGGLIGTMLT 69 (226)
Q Consensus 49 ~~~fd~i~GtS~Gai~a~~l~ 69 (226)
+..+|+++|.|.|-+.|+..+
T Consensus 672 Gi~Pd~v~GHSlGE~aAa~aA 692 (2582)
T TIGR02813 672 GFKADMTAGHSFGELSALCAA 692 (2582)
T ss_pred CCccceeecCCHHHHHHHHHh
Confidence 456899999999998887754
No 99
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=28.99 E-value=80 Score=25.11 Aligned_cols=18 Identities=33% Similarity=0.322 Sum_probs=15.7
Q ss_pred eeeecCHHHHHHHHhcCC
Q 027230 54 IVAGTSTGGLIGTMLTAP 71 (226)
Q Consensus 54 ~i~GtS~Gai~a~~l~~~ 71 (226)
.++|.|.||.+++.++..
T Consensus 98 ~lvG~S~Gg~~a~~~a~~ 115 (278)
T TIGR03056 98 GVIGHSAGAAIALRLALD 115 (278)
T ss_pred eEEEECccHHHHHHHHHh
Confidence 788999999999988754
No 100
>PRK07581 hypothetical protein; Validated
Probab=28.95 E-value=37 Score=28.63 Aligned_cols=19 Identities=21% Similarity=0.162 Sum_probs=16.3
Q ss_pred ceeeecCHHHHHHHHhcCC
Q 027230 53 DIVAGTSTGGLIGTMLTAP 71 (226)
Q Consensus 53 d~i~GtS~Gai~a~~l~~~ 71 (226)
-.++|.|.||.+|..++..
T Consensus 126 ~~lvG~S~GG~va~~~a~~ 144 (339)
T PRK07581 126 ALVVGWSMGAQQTYHWAVR 144 (339)
T ss_pred EEEEEeCHHHHHHHHHHHH
Confidence 3579999999999998865
No 101
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=28.82 E-value=1.1e+02 Score=27.08 Aligned_cols=18 Identities=17% Similarity=0.097 Sum_probs=15.5
Q ss_pred eeeecCHHHHHHHHhcCC
Q 027230 54 IVAGTSTGGLIGTMLTAP 71 (226)
Q Consensus 54 ~i~GtS~Gai~a~~l~~~ 71 (226)
.+.|.|.||.+|..++..
T Consensus 268 ~l~G~S~GG~~Al~~A~~ 285 (414)
T PRK05077 268 AAFGFRFGANVAVRLAYL 285 (414)
T ss_pred EEEEEChHHHHHHHHHHh
Confidence 588999999999988754
No 102
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=28.81 E-value=38 Score=27.50 Aligned_cols=17 Identities=24% Similarity=0.393 Sum_probs=14.9
Q ss_pred eeecCHHHHHHHHhcCC
Q 027230 55 VAGTSTGGLIGTMLTAP 71 (226)
Q Consensus 55 i~GtS~Gai~a~~l~~~ 71 (226)
++|.|.||.+|+.++..
T Consensus 95 LvG~S~GG~va~~~a~~ 111 (276)
T TIGR02240 95 AIGVSWGGALAQQFAHD 111 (276)
T ss_pred EEEECHHHHHHHHHHHH
Confidence 66999999999998854
No 103
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=28.63 E-value=39 Score=27.17 Aligned_cols=44 Identities=18% Similarity=0.353 Sum_probs=25.2
Q ss_pred EEEEEeeCCchhhHHH----HHHHHHHHHHhhhcCCCCCccccccceeeecCHHHHHHH
Q 027230 12 ITVLSIDGGGVKGIIP----GTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGT 66 (226)
Q Consensus 12 ~~iL~LdGGG~rG~~~----~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~ 66 (226)
..++...||-.+-+.+ -|.++-|.++.+. | -+.+|.||||+++.
T Consensus 85 ~d~IyVgGGNTF~LL~~lke~gld~iIr~~vk~--G---------~~YiG~SAGA~ia~ 132 (224)
T COG3340 85 ADIIYVGGGNTFNLLQELKETGLDDIIRERVKA--G---------TPYIGWSAGANIAG 132 (224)
T ss_pred ccEEEECCchHHHHHHHHHHhCcHHHHHHHHHc--C---------CceEEeccCceeec
Confidence 4466666666554322 2333334443321 2 36889999999884
No 104
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=27.96 E-value=38 Score=27.21 Aligned_cols=17 Identities=35% Similarity=0.620 Sum_probs=14.0
Q ss_pred eeeecCHHHHHHHHhcC
Q 027230 54 IVAGTSTGGLIGTMLTA 70 (226)
Q Consensus 54 ~i~GtS~Gai~a~~l~~ 70 (226)
+++|.|.||++|-.+..
T Consensus 88 ilVgHSmGGlvar~~l~ 104 (225)
T PF07819_consen 88 ILVGHSMGGLVARSALS 104 (225)
T ss_pred EEEEEchhhHHHHHHHh
Confidence 58899999999976553
No 105
>PLN02408 phospholipase A1
Probab=27.13 E-value=1e+02 Score=26.96 Aligned_cols=17 Identities=24% Similarity=0.431 Sum_probs=15.0
Q ss_pred eeeecCHHHHHHHHhcC
Q 027230 54 IVAGTSTGGLIGTMLTA 70 (226)
Q Consensus 54 ~i~GtS~Gai~a~~l~~ 70 (226)
+|+|.|.||-+|++.+.
T Consensus 203 ~vTGHSLGGALAtLaA~ 219 (365)
T PLN02408 203 TITGHSLGAALATLTAY 219 (365)
T ss_pred EEeccchHHHHHHHHHH
Confidence 58999999999998773
No 106
>PRK10162 acetyl esterase; Provisional
Probab=26.88 E-value=42 Score=28.30 Aligned_cols=17 Identities=24% Similarity=0.313 Sum_probs=15.0
Q ss_pred eeeecCHHHHHHHHhcC
Q 027230 54 IVAGTSTGGLIGTMLTA 70 (226)
Q Consensus 54 ~i~GtS~Gai~a~~l~~ 70 (226)
.|+|.|+||.+|+.++.
T Consensus 157 ~l~G~SaGG~la~~~a~ 173 (318)
T PRK10162 157 GFAGDSAGAMLALASAL 173 (318)
T ss_pred EEEEECHHHHHHHHHHH
Confidence 68999999999988774
No 107
>TIGR00541 hisDCase_pyru histidine decarboxylase, pyruvoyl type. This enzyme converts histadine to histamine in a single step by catalyzing the release of CO2. This type is synthesized as an inactive single chain precursor, then cleaved into two chains. The Ser at the new N-terminus at the cleavage site is converted to a pyruvoyl group essential for activity. This type of histidine decarboxylase appears is known so far only in some Gram-positive bacteria, where it may play a role in amino acid catabolism. There is also a pyridoxal phosphate type histidine decarboxylase, as found in human, where histamine is a biologically active amine.
Probab=25.92 E-value=39 Score=27.98 Aligned_cols=68 Identities=12% Similarity=0.170 Sum_probs=42.0
Q ss_pred cccceeeecCHHHHHHHHhcCCCCCCCccccHHHHHHHHHhhCCCCcCCCccCCchhHHHHhhhccccccCCChHHHHHH
Q 027230 50 DYFDIVAGTSTGGLIGTMLTAPNKDGRPMYAAKDINNFYFEHCPKIFPQLSRGGNFLRSIISSLSKWVRPMYDGKYIRSL 129 (226)
Q Consensus 50 ~~fd~i~GtS~Gai~a~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 129 (226)
-+++++.-+|-.++.+..++.. ...-.+.-.+-.+.+|..+.+. +---+.||.++|.+.
T Consensus 72 GQINm~tASSF~G~~G~iwGyD---------la~~~~i~~~~~~pLf~~kq~d------------Gs~lpVYda~PLldA 130 (310)
T TIGR00541 72 GQINMLTASSFCGVAGQVIGHD---------IARHDSIANDEAKPLFEEKQFD------------GSELKIYDAKPLLDA 130 (310)
T ss_pred ceeeeeeeecccCcCccEeeee---------hhcCccccccccCcceeecccC------------CCCCccccchhHHHH
Confidence 3578999999888888776633 1111111112334556554321 112357999999999
Q ss_pred HHHHhcccc
Q 027230 130 TKEILEDIT 138 (226)
Q Consensus 130 l~~~~~~~~ 138 (226)
..++||..+
T Consensus 131 ~~elFGt~~ 139 (310)
T TIGR00541 131 GIELFGTEK 139 (310)
T ss_pred HHHHhCCCc
Confidence 999999643
No 108
>PRK10566 esterase; Provisional
Probab=25.92 E-value=40 Score=26.81 Aligned_cols=18 Identities=33% Similarity=0.495 Sum_probs=15.6
Q ss_pred eeeecCHHHHHHHHhcCC
Q 027230 54 IVAGTSTGGLIGTMLTAP 71 (226)
Q Consensus 54 ~i~GtS~Gai~a~~l~~~ 71 (226)
.++|.|.||.+++.++..
T Consensus 110 ~v~G~S~Gg~~al~~~~~ 127 (249)
T PRK10566 110 AVGGASMGGMTALGIMAR 127 (249)
T ss_pred eEEeecccHHHHHHHHHh
Confidence 589999999999988754
No 109
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=25.75 E-value=43 Score=25.80 Aligned_cols=18 Identities=44% Similarity=0.634 Sum_probs=15.2
Q ss_pred eeeecCHHHHHHHHhcCC
Q 027230 54 IVAGTSTGGLIGTMLTAP 71 (226)
Q Consensus 54 ~i~GtS~Gai~a~~l~~~ 71 (226)
.++|.|.||.++..++..
T Consensus 82 ~liG~S~Gg~~a~~~a~~ 99 (251)
T TIGR02427 82 VFCGLSLGGLIAQGLAAR 99 (251)
T ss_pred EEEEeCchHHHHHHHHHH
Confidence 578999999999987754
No 110
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=25.70 E-value=45 Score=25.98 Aligned_cols=18 Identities=39% Similarity=0.595 Sum_probs=15.2
Q ss_pred eeeecCHHHHHHHHhcCC
Q 027230 54 IVAGTSTGGLIGTMLTAP 71 (226)
Q Consensus 54 ~i~GtS~Gai~a~~l~~~ 71 (226)
.++|.|.||.+|..++..
T Consensus 83 ~l~G~S~Gg~~a~~~a~~ 100 (257)
T TIGR03611 83 HFVGHALGGLIGLQLALR 100 (257)
T ss_pred EEEEechhHHHHHHHHHH
Confidence 588999999999888743
No 111
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=25.63 E-value=59 Score=29.17 Aligned_cols=44 Identities=18% Similarity=0.340 Sum_probs=30.6
Q ss_pred chhhH-HHHHHHHHHHHHhhhcCCCCCccccccceeeecCHHHHHHHHhc
Q 027230 21 GVKGI-IPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLT 69 (226)
Q Consensus 21 G~rG~-~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~ 69 (226)
|..|+ =++.+|+-+.+.+....|+.-++ .+.|.|+||..+.++.
T Consensus 182 gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~V-----Tl~G~SAGa~sv~~~l 226 (535)
T PF00135_consen 182 GNYGLLDQRLALKWVQDNIAAFGGDPDNV-----TLFGQSAGAASVSLLL 226 (535)
T ss_dssp STHHHHHHHHHHHHHHHHGGGGTEEEEEE-----EEEEETHHHHHHHHHH
T ss_pred hhhhhhhhHHHHHHHHhhhhhcccCCcce-----eeeeecccccccceee
Confidence 56675 36778888888888776642221 3679999998886543
No 112
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=25.55 E-value=42 Score=28.17 Aligned_cols=18 Identities=28% Similarity=0.479 Sum_probs=15.5
Q ss_pred eeeecCHHHHHHHHhcCC
Q 027230 54 IVAGTSTGGLIGTMLTAP 71 (226)
Q Consensus 54 ~i~GtS~Gai~a~~l~~~ 71 (226)
.++|.|.||.+|+.++..
T Consensus 137 ~l~GhSmGG~ia~~~a~~ 154 (330)
T PLN02298 137 FLYGESMGGAICLLIHLA 154 (330)
T ss_pred EEEEecchhHHHHHHHhc
Confidence 799999999999877753
No 113
>PRK03592 haloalkane dehalogenase; Provisional
Probab=25.51 E-value=47 Score=27.24 Aligned_cols=19 Identities=21% Similarity=0.296 Sum_probs=15.9
Q ss_pred ceeeecCHHHHHHHHhcCC
Q 027230 53 DIVAGTSTGGLIGTMLTAP 71 (226)
Q Consensus 53 d~i~GtS~Gai~a~~l~~~ 71 (226)
=.++|.|.||.+|..++..
T Consensus 95 ~~lvGhS~Gg~ia~~~a~~ 113 (295)
T PRK03592 95 VVLVGHDWGSALGFDWAAR 113 (295)
T ss_pred eEEEEECHHHHHHHHHHHh
Confidence 3578999999999988754
No 114
>PLN02965 Probable pheophorbidase
Probab=25.16 E-value=41 Score=26.95 Aligned_cols=18 Identities=33% Similarity=0.287 Sum_probs=16.0
Q ss_pred eeeecCHHHHHHHHhcCC
Q 027230 54 IVAGTSTGGLIGTMLTAP 71 (226)
Q Consensus 54 ~i~GtS~Gai~a~~l~~~ 71 (226)
+++|.|.||.++..++..
T Consensus 75 ~lvGhSmGG~ia~~~a~~ 92 (255)
T PLN02965 75 ILVGHSIGGGSVTEALCK 92 (255)
T ss_pred EEEecCcchHHHHHHHHh
Confidence 789999999999988764
No 115
>PF06576 DUF1133: Protein of unknown function (DUF1133); InterPro: IPR010557 This family consists of a number of hypothetical proteins from Escherichia coli O157:H7 and Salmonella typhi. The function of this family is unknown.
Probab=25.02 E-value=2e+02 Score=22.26 Aligned_cols=25 Identities=12% Similarity=0.383 Sum_probs=20.2
Q ss_pred cccccceeeecCHHHHHHHHhcCCC
Q 027230 48 IADYFDIVAGTSTGGLIGTMLTAPN 72 (226)
Q Consensus 48 ~~~~fd~i~GtS~Gai~a~~l~~~~ 72 (226)
+--.++++.|-++|.+..-+|+...
T Consensus 30 mWGRwsyiggG~~g~mfnqLl~s~k 54 (176)
T PF06576_consen 30 MWGRWSYIGGGKGGNMFNQLLASKK 54 (176)
T ss_pred hhheeecccCCchhhHHHHHHhccc
Confidence 3456789999999998888888764
No 116
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=24.93 E-value=2.4e+02 Score=24.99 Aligned_cols=19 Identities=37% Similarity=0.462 Sum_probs=16.3
Q ss_pred ceeeecCHHHHHHHHhcCC
Q 027230 53 DIVAGTSTGGLIGTMLTAP 71 (226)
Q Consensus 53 d~i~GtS~Gai~a~~l~~~ 71 (226)
-.|+|-|.||+.|+.++..
T Consensus 290 ~~IaG~S~GGl~AL~~al~ 308 (411)
T PRK10439 290 TVVAGQSFGGLAALYAGLH 308 (411)
T ss_pred eEEEEEChHHHHHHHHHHh
Confidence 3699999999999988754
No 117
>PLN02324 triacylglycerol lipase
Probab=24.52 E-value=1.2e+02 Score=26.97 Aligned_cols=17 Identities=24% Similarity=0.448 Sum_probs=14.6
Q ss_pred eeeecCHHHHHHHHhcC
Q 027230 54 IVAGTSTGGLIGTMLTA 70 (226)
Q Consensus 54 ~i~GtS~Gai~a~~l~~ 70 (226)
.|+|.|.||-+|++.+.
T Consensus 218 tvTGHSLGGALAtLaA~ 234 (415)
T PLN02324 218 TFTGHSLGAVMSVLSAA 234 (415)
T ss_pred EEecCcHHHHHHHHHHH
Confidence 48899999999988773
No 118
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=24.13 E-value=1.3e+02 Score=22.92 Aligned_cols=19 Identities=26% Similarity=0.387 Sum_probs=15.9
Q ss_pred ceeeecCHHHHHHHHhcCC
Q 027230 53 DIVAGTSTGGLIGTMLTAP 71 (226)
Q Consensus 53 d~i~GtS~Gai~a~~l~~~ 71 (226)
=.+.|.|.||.+++.++..
T Consensus 46 ~~~vG~S~Gg~~~~~~a~~ 64 (230)
T PF00561_consen 46 INLVGHSMGGMLALEYAAQ 64 (230)
T ss_dssp EEEEEETHHHHHHHHHHHH
T ss_pred eEEEEECCChHHHHHHHHH
Confidence 3578999999999988754
No 119
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=24.11 E-value=52 Score=26.94 Aligned_cols=18 Identities=28% Similarity=0.473 Sum_probs=15.6
Q ss_pred eeeecCHHHHHHHHhcCC
Q 027230 54 IVAGTSTGGLIGTMLTAP 71 (226)
Q Consensus 54 ~i~GtS~Gai~a~~l~~~ 71 (226)
.++|.|.||.+|+.++..
T Consensus 105 ~lvGhS~Gg~va~~~a~~ 122 (294)
T PLN02824 105 FVICNSVGGVVGLQAAVD 122 (294)
T ss_pred EEEEeCHHHHHHHHHHHh
Confidence 478999999999988764
No 120
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=24.07 E-value=49 Score=27.18 Aligned_cols=18 Identities=22% Similarity=0.303 Sum_probs=15.9
Q ss_pred eeeecCHHHHHHHHhcCC
Q 027230 54 IVAGTSTGGLIGTMLTAP 71 (226)
Q Consensus 54 ~i~GtS~Gai~a~~l~~~ 71 (226)
.++|.|.||.+|+.++..
T Consensus 141 ~~~G~S~GG~~a~~~a~~ 158 (275)
T TIGR02821 141 GITGHSMGGHGALVIALK 158 (275)
T ss_pred EEEEEChhHHHHHHHHHh
Confidence 689999999999988854
No 121
>PRK00870 haloalkane dehalogenase; Provisional
Probab=23.62 E-value=53 Score=27.10 Aligned_cols=18 Identities=39% Similarity=0.512 Sum_probs=15.3
Q ss_pred eeeecCHHHHHHHHhcCC
Q 027230 54 IVAGTSTGGLIGTMLTAP 71 (226)
Q Consensus 54 ~i~GtS~Gai~a~~l~~~ 71 (226)
.++|.|.||.+|..++..
T Consensus 118 ~lvGhS~Gg~ia~~~a~~ 135 (302)
T PRK00870 118 TLVCQDWGGLIGLRLAAE 135 (302)
T ss_pred EEEEEChHHHHHHHHHHh
Confidence 478999999999988754
No 122
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=23.18 E-value=57 Score=25.02 Aligned_cols=18 Identities=39% Similarity=0.525 Sum_probs=15.1
Q ss_pred eeeecCHHHHHHHHhcCC
Q 027230 54 IVAGTSTGGLIGTMLTAP 71 (226)
Q Consensus 54 ~i~GtS~Gai~a~~l~~~ 71 (226)
.++|.|.||.++..++..
T Consensus 68 ~lvG~S~Gg~~a~~~a~~ 85 (245)
T TIGR01738 68 IWLGWSLGGLVALHIAAT 85 (245)
T ss_pred EEEEEcHHHHHHHHHHHH
Confidence 588999999999887743
No 123
>cd02252 nylC_like nylC-like family; composed of proteins with similarity to Flavobacterium endo-type 6-aminohexanoate-oligomer hydrolase (EIII), the product of the nylon oligomer degradation gene, nylC. EIII is an amide hydrolase that catalyzes the degradation of highly-polymerized 6-aminohexanoate oligomers. Together with other nylon degradation enzymes, such as 6-aminohexanoate cyclic dimer hydrolase (EI) and 6-aminohexanoate dimer hydrolase (EII), EIII plays a role in the detoxification and biological removal of the synthetic by-products of nylon manufacture. EIII shows sequence similarity to L-aminopeptidase D-amidase/D-esterase (DmpA), an aminopeptidase that releases N-terminal D and L amino acids from peptide substrates. Like DmpA, EIII undergoes autocatalytic cleavage in front of a nucleophile to form a heterodimer. DmpA shows similarity in catalytic mechanism to N-terminal nucleophile (Ntn) hydrolases, which are enzymes that catalyze the cleavage of amide bonds through the nucl
Probab=22.84 E-value=1.3e+02 Score=24.88 Aligned_cols=33 Identities=21% Similarity=0.351 Sum_probs=27.5
Q ss_pred CCCCCCeEEEEEeeCCchhh-HHHHHHHHHHHHH
Q 027230 5 TIAKGKKITVLSIDGGGVKG-IIPGTILAFLESR 37 (226)
Q Consensus 5 ~~~~~~~~~iL~LdGGG~rG-~~~~gvL~~L~~~ 37 (226)
|...-+++..++|.||-+-| ...-+++++|+++
T Consensus 51 p~~~v~~v~aIvLtggsa~GL~aa~gv~~~l~e~ 84 (260)
T cd02252 51 PENLVQKVHAIVLSGGSAFGLAAADGVMRALEER 84 (260)
T ss_pred cccccccccEEEEeCCchhhHHHHHHHHHHHHHh
Confidence 44455678889999999999 6888999999886
No 124
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=22.66 E-value=58 Score=26.92 Aligned_cols=17 Identities=18% Similarity=0.249 Sum_probs=14.8
Q ss_pred eeeecCHHHHHHHHhcC
Q 027230 54 IVAGTSTGGLIGTMLTA 70 (226)
Q Consensus 54 ~i~GtS~Gai~a~~l~~ 70 (226)
.++|.|.||.+|..++.
T Consensus 115 ~lIGhSlGa~vAg~~a~ 131 (275)
T cd00707 115 HLIGHSLGAHVAGFAGK 131 (275)
T ss_pred EEEEecHHHHHHHHHHH
Confidence 48899999999988874
No 125
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=22.57 E-value=49 Score=28.12 Aligned_cols=18 Identities=22% Similarity=0.396 Sum_probs=15.6
Q ss_pred eeeecCHHHHHHHHhcCC
Q 027230 54 IVAGTSTGGLIGTMLTAP 71 (226)
Q Consensus 54 ~i~GtS~Gai~a~~l~~~ 71 (226)
+++|.|.||.+|+.++..
T Consensus 165 ~LvGhSmGG~val~~a~~ 182 (349)
T PLN02385 165 FLFGQSMGGAVALKVHLK 182 (349)
T ss_pred EEEEeccchHHHHHHHHh
Confidence 688999999999888754
No 126
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=22.54 E-value=44 Score=27.91 Aligned_cols=18 Identities=39% Similarity=0.569 Sum_probs=15.6
Q ss_pred eeeecCHHHHHHHHhcCC
Q 027230 54 IVAGTSTGGLIGTMLTAP 71 (226)
Q Consensus 54 ~i~GtS~Gai~a~~l~~~ 71 (226)
.++|.|+||-+++.++..
T Consensus 155 ~v~GdSAGG~La~~~a~~ 172 (312)
T COG0657 155 AVAGDSAGGHLALALALA 172 (312)
T ss_pred EEEecCcccHHHHHHHHH
Confidence 588999999999988843
No 127
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=22.53 E-value=60 Score=25.36 Aligned_cols=18 Identities=33% Similarity=0.506 Sum_probs=15.5
Q ss_pred eeeecCHHHHHHHHhcCC
Q 027230 54 IVAGTSTGGLIGTMLTAP 71 (226)
Q Consensus 54 ~i~GtS~Gai~a~~l~~~ 71 (226)
.++|.|.||.++..++..
T Consensus 98 ~l~G~S~Gg~~a~~~a~~ 115 (212)
T TIGR01840 98 YVTGLSAGGGMTAVLGCT 115 (212)
T ss_pred EEEEECHHHHHHHHHHHh
Confidence 589999999999888754
No 128
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=22.45 E-value=1.2e+02 Score=27.72 Aligned_cols=45 Identities=20% Similarity=0.302 Sum_probs=31.3
Q ss_pred chhhH-HHHHHHHHHHHHhhhcCCCCCccccccceeeecCHHHHHHHHhcC
Q 027230 21 GVKGI-IPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTA 70 (226)
Q Consensus 21 G~rG~-~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~ 70 (226)
|.-|+ =++.+|+-+.+.+....|..-+ + .+.|+|+||..+.++..
T Consensus 169 gN~gl~Dq~~AL~wv~~~I~~FGGdp~~----v-Tl~G~saGa~~v~~l~~ 214 (545)
T KOG1516|consen 169 GNLGLFDQLLALRWVKDNIPSFGGDPKN----V-TLFGHSAGAASVSLLTL 214 (545)
T ss_pred CcccHHHHHHHHHHHHHHHHhcCCCCCe----E-EEEeechhHHHHHHHhc
Confidence 44565 4567788888888777664322 2 36799999999877664
No 129
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=22.10 E-value=1.2e+02 Score=25.30 Aligned_cols=17 Identities=29% Similarity=0.421 Sum_probs=14.3
Q ss_pred ceeeecCHHHHHHHHhc
Q 027230 53 DIVAGTSTGGLIGTMLT 69 (226)
Q Consensus 53 d~i~GtS~Gai~a~~l~ 69 (226)
..|-|.|-||++++...
T Consensus 139 ~~i~GhSlGGLfvl~aL 155 (264)
T COG2819 139 TAIIGHSLGGLFVLFAL 155 (264)
T ss_pred ceeeeecchhHHHHHHH
Confidence 68999999999996543
No 130
>PRK10749 lysophospholipase L2; Provisional
Probab=21.87 E-value=59 Score=27.43 Aligned_cols=18 Identities=28% Similarity=0.307 Sum_probs=14.6
Q ss_pred eeeecCHHHHHHHHhcCC
Q 027230 54 IVAGTSTGGLIGTMLTAP 71 (226)
Q Consensus 54 ~i~GtS~Gai~a~~l~~~ 71 (226)
.++|.|.||.++..++..
T Consensus 134 ~l~GhSmGG~ia~~~a~~ 151 (330)
T PRK10749 134 YALAHSMGGAILTLFLQR 151 (330)
T ss_pred EEEEEcHHHHHHHHHHHh
Confidence 477999999999876643
No 131
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=21.75 E-value=52 Score=26.07 Aligned_cols=15 Identities=20% Similarity=-0.031 Sum_probs=12.3
Q ss_pred ceeeecCHHHHHHHH
Q 027230 53 DIVAGTSTGGLIGTM 67 (226)
Q Consensus 53 d~i~GtS~Gai~a~~ 67 (226)
-.++|+|+|+++..-
T Consensus 115 ~~i~G~SAGa~i~~~ 129 (212)
T cd03146 115 VVYIGWSAGSNCWFP 129 (212)
T ss_pred CEEEEECHhHHhhCC
Confidence 368999999988754
No 132
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=21.68 E-value=1.7e+02 Score=26.99 Aligned_cols=22 Identities=23% Similarity=-0.043 Sum_probs=18.6
Q ss_pred cccccceeeecCHHHHHHHHhc
Q 027230 48 IADYFDIVAGTSTGGLIGTMLT 69 (226)
Q Consensus 48 ~~~~fd~i~GtS~Gai~a~~l~ 69 (226)
.+..+|.++|.|.|-+.|+..+
T Consensus 262 ~GI~Pdav~GHSlGE~aAa~aA 283 (538)
T TIGR02816 262 FAIKPDFALGYSKGEASMWASL 283 (538)
T ss_pred cCCCCCEEeecCHHHHHHHHHh
Confidence 4567899999999999988765
No 133
>PLN02802 triacylglycerol lipase
Probab=21.27 E-value=1.1e+02 Score=27.87 Aligned_cols=16 Identities=25% Similarity=0.495 Sum_probs=14.5
Q ss_pred eeeecCHHHHHHHHhc
Q 027230 54 IVAGTSTGGLIGTMLT 69 (226)
Q Consensus 54 ~i~GtS~Gai~a~~l~ 69 (226)
+|+|.|.||-+|.+.+
T Consensus 333 ~VTGHSLGGALAtLaA 348 (509)
T PLN02802 333 TVTGHSLGAALALLVA 348 (509)
T ss_pred EEeccchHHHHHHHHH
Confidence 5899999999999876
No 134
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=21.20 E-value=56 Score=26.30 Aligned_cols=18 Identities=22% Similarity=0.329 Sum_probs=15.6
Q ss_pred eeeecCHHHHHHHHhcCC
Q 027230 54 IVAGTSTGGLIGTMLTAP 71 (226)
Q Consensus 54 ~i~GtS~Gai~a~~l~~~ 71 (226)
.++|.|.||.+|..++..
T Consensus 104 ~lvG~S~Gg~ia~~~a~~ 121 (282)
T TIGR03343 104 HLVGNSMGGATALNFALE 121 (282)
T ss_pred eEEEECchHHHHHHHHHh
Confidence 589999999999988753
No 135
>PRK10349 carboxylesterase BioH; Provisional
Probab=21.14 E-value=66 Score=25.63 Aligned_cols=21 Identities=33% Similarity=0.447 Sum_probs=16.6
Q ss_pred cccceeeecCHHHHHHHHhcCC
Q 027230 50 DYFDIVAGTSTGGLIGTMLTAP 71 (226)
Q Consensus 50 ~~fd~i~GtS~Gai~a~~l~~~ 71 (226)
+.+ .++|.|.||.+|..++..
T Consensus 74 ~~~-~lvGhS~Gg~ia~~~a~~ 94 (256)
T PRK10349 74 DKA-IWLGWSLGGLVASQIALT 94 (256)
T ss_pred CCe-EEEEECHHHHHHHHHHHh
Confidence 345 468999999999988754
No 136
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=20.88 E-value=64 Score=25.53 Aligned_cols=18 Identities=22% Similarity=0.372 Sum_probs=15.8
Q ss_pred eeeecCHHHHHHHHhcCC
Q 027230 54 IVAGTSTGGLIGTMLTAP 71 (226)
Q Consensus 54 ~i~GtS~Gai~a~~l~~~ 71 (226)
-|.|+|-||-+|+++++.
T Consensus 25 gi~G~SkGaelALllAs~ 42 (213)
T PF08840_consen 25 GIIGISKGAELALLLASR 42 (213)
T ss_dssp EEEEETHHHHHHHHHHHH
T ss_pred EEEEECHHHHHHHHHHhc
Confidence 378999999999999865
No 137
>COG0578 GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=20.63 E-value=74 Score=29.29 Aligned_cols=39 Identities=26% Similarity=0.403 Sum_probs=26.1
Q ss_pred EEeeCCchhhHHHHHHHHHHHHHhhhcCCCCCccccccceeeecCHH
Q 027230 15 LSIDGGGVKGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTG 61 (226)
Q Consensus 15 L~LdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~G 61 (226)
|.+-|||+-|+ |+-..+.- .|-.+-+.+.-|+-+|||.-
T Consensus 15 viVIGGGitG~---GiArDaA~-----RGl~v~LvE~~D~AsGTSsr 53 (532)
T COG0578 15 VIVIGGGITGA---GIARDAAG-----RGLKVALVEKGDLASGTSSR 53 (532)
T ss_pred EEEECCchhhH---HHHHHHHh-----CCCeEEEEecCcccCcccCc
Confidence 66678888875 33333322 25556678889999999975
No 138
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=20.59 E-value=1.3e+02 Score=25.61 Aligned_cols=45 Identities=24% Similarity=0.272 Sum_probs=31.5
Q ss_pred hhHHHHHHHHHHHHHhhhcCCCCCccccccceeeecCHHHHHHHHhcCC
Q 027230 23 KGIIPGTILAFLESRLQDLDGPNARIADYFDIVAGTSTGGLIGTMLTAP 71 (226)
Q Consensus 23 rG~~~~gvL~~L~~~~~~~~g~~~~~~~~fd~i~GtS~Gai~a~~l~~~ 71 (226)
||+=.++.|++|.+++...-|.+ ..==+|+|-|.|+.++..|++.
T Consensus 120 ~g~ddVgflr~lva~l~~~~gid----p~RVyvtGlS~GG~Ma~~lac~ 164 (312)
T COG3509 120 RGVDDVGFLRALVAKLVNEYGID----PARVYVTGLSNGGRMANRLACE 164 (312)
T ss_pred CCccHHHHHHHHHHHHHHhcCcC----cceEEEEeeCcHHHHHHHHHhc
Confidence 56668899999988875432211 1112699999999999887765
No 139
>PF12611 DUF3766: Protein of unknown function (DUF3766); InterPro: IPR013367 Proteins in this entry are encoded in a subset of bacterial flagellar operons, generally between genes designated flgD and flgE, in species as diverse as Bacillus halodurans and various other Firmicutes, Geobacter sulfurreducens, and Bdellovibrio bacteriovorus. The specific molecular function of this protein is unknown.
Probab=20.28 E-value=63 Score=16.29 Aligned_cols=17 Identities=18% Similarity=0.544 Sum_probs=14.3
Q ss_pred EEEEeecCCCcceEeec
Q 027230 147 IIPTFDIKRLQPVIFSS 163 (226)
Q Consensus 147 ~v~a~~~~~~~~~~f~~ 163 (226)
+|+|.|-...+..+|+|
T Consensus 2 VITamd~~~~k~nvFTN 18 (24)
T PF12611_consen 2 VITAMDKEEMKENVFTN 18 (24)
T ss_pred EEEEEChhHhhcCceec
Confidence 57888888888888988
No 140
>PLN02719 triacylglycerol lipase
Probab=20.23 E-value=1.2e+02 Score=27.71 Aligned_cols=16 Identities=31% Similarity=0.567 Sum_probs=14.4
Q ss_pred eeeecCHHHHHHHHhc
Q 027230 54 IVAGTSTGGLIGTMLT 69 (226)
Q Consensus 54 ~i~GtS~Gai~a~~l~ 69 (226)
.|+|.|.||-+|++.+
T Consensus 301 tVTGHSLGGALAtLaA 316 (518)
T PLN02719 301 TVTGHSLGGALAVLSA 316 (518)
T ss_pred EEecCcHHHHHHHHHH
Confidence 4899999999999877
No 141
>PLN02847 triacylglycerol lipase
Probab=20.17 E-value=65 Score=30.08 Aligned_cols=17 Identities=35% Similarity=0.485 Sum_probs=14.6
Q ss_pred eeeecCHHHHHHHHhcC
Q 027230 54 IVAGTSTGGLIGTMLTA 70 (226)
Q Consensus 54 ~i~GtS~Gai~a~~l~~ 70 (226)
+|+|+|-||-+|++++.
T Consensus 254 VITGHSLGGGVAALLAi 270 (633)
T PLN02847 254 KIVGHSLGGGTAALLTY 270 (633)
T ss_pred EEeccChHHHHHHHHHH
Confidence 47899999999988864
Done!