BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027233
(226 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 146 bits (368), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 122/208 (58%), Gaps = 14/208 (6%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E+ + +NHPNI++LF+ + E ++LV+E+ +GG + Y+ HGR+ E+ AR +Q+
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI 122
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYM 135
+ ++ + I+HRDLK EN+L LD D+ +KIADFG S GN ++ CGSP Y
Sbjct: 123 VSAVQYCHQKFIVHRDLKAENLL---LDADMNIKIADFGFSNEFTFGNKLDEFCGSPPYA 179
Query: 136 APEVLQFQRYD-EKVDMWSVGAILFELLNGYPPFSGRNNVQL----------IVPALHPD 184
APE+ Q ++YD +VD+WS+G IL+ L++G PF G+N +L I + D
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTD 239
Query: 185 CVDMCLKLLSANTVDRLSFNEFYHHRFL 212
C ++ K L N R + + R++
Sbjct: 240 CENLLKKFLILNPSKRGTLEQIMKDRWM 267
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 146 bits (368), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 121/208 (58%), Gaps = 14/208 (6%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E+ + +NHPNI++LF+ + E ++LV+E+ +GG + Y+ HGR+ E+ AR +Q+
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI 122
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYM 135
+ ++ + I+HRDLK EN+L LD D+ +KIADFG S GN + CGSP Y
Sbjct: 123 VSAVQYCHQKFIVHRDLKAENLL---LDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYA 179
Query: 136 APEVLQFQRYD-EKVDMWSVGAILFELLNGYPPFSGRNNVQL----------IVPALHPD 184
APE+ Q ++YD +VD+WS+G IL+ L++G PF G+N +L I + D
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTD 239
Query: 185 CVDMCLKLLSANTVDRLSFNEFYHHRFL 212
C ++ K L N R + + R++
Sbjct: 240 CENLLKKFLILNPSKRGTLEQIMKDRWM 267
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 145 bits (367), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 121/208 (58%), Gaps = 14/208 (6%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E+ + +NHPNI++LF+ + E ++LV+E+ +GG + Y+ HGR+ E+ AR +Q+
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI 122
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYM 135
+ ++ + I+HRDLK EN+L LD D+ +KIADFG S GN + CGSP Y
Sbjct: 123 VSAVQYCHQKFIVHRDLKAENLL---LDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYA 179
Query: 136 APEVLQFQRYD-EKVDMWSVGAILFELLNGYPPFSGRNNVQL----------IVPALHPD 184
APE+ Q ++YD +VD+WS+G IL+ L++G PF G+N +L I + D
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTD 239
Query: 185 CVDMCLKLLSANTVDRLSFNEFYHHRFL 212
C ++ K L N R + + R++
Sbjct: 240 CENLLKKFLILNPSKRGTLEQIMKDRWM 267
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 145 bits (367), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 121/208 (58%), Gaps = 14/208 (6%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E+ + +NHPNI++LF+ + E ++LV+E+ +GG + Y+ HGR+ E+ AR +Q+
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI 122
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYM 135
+ ++ + I+HRDLK EN+L LD D+ +KIADFG S GN + CGSP Y
Sbjct: 123 VSAVQYCHQKFIVHRDLKAENLL---LDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYA 179
Query: 136 APEVLQFQRYD-EKVDMWSVGAILFELLNGYPPFSGRNNVQL----------IVPALHPD 184
APE+ Q ++YD +VD+WS+G IL+ L++G PF G+N +L I + D
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTD 239
Query: 185 CVDMCLKLLSANTVDRLSFNEFYHHRFL 212
C ++ K L N R + + R++
Sbjct: 240 CENLLKKFLILNPSKRGTLEQIMKDRWM 267
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 145 bits (366), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 120/208 (57%), Gaps = 14/208 (6%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E+ + +NHPNI++LF+ + E ++L++E+ +GG + Y+ HGR+ E+ AR +Q+
Sbjct: 61 EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQI 120
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYM 135
+ ++ + I+HRDLK EN+L LD D+ +KIADFG S G + CGSP Y
Sbjct: 121 VSAVQYCHQKRIVHRDLKAENLL---LDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYA 177
Query: 136 APEVLQFQRYD-EKVDMWSVGAILFELLNGYPPFSGRNNVQLIVPALH----------PD 184
APE+ Q ++YD +VD+WS+G IL+ L++G PF G+N +L L D
Sbjct: 178 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTD 237
Query: 185 CVDMCLKLLSANTVDRLSFNEFYHHRFL 212
C ++ + L N + R + + R++
Sbjct: 238 CENLLKRFLVLNPIKRGTLEQIMKDRWI 265
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 145 bits (365), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 105/158 (66%), Gaps = 4/158 (2%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E+ + +NHPNI++LF+ + E ++LV+E+ +GG + Y+ HGR+ E+ AR +Q+
Sbjct: 64 EVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI 123
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYM 135
+ ++ + +I+HRDLK EN+LL G D+ +KIADFG S GN + CGSP Y
Sbjct: 124 VSAVQYCHQKYIVHRDLKAENLLLDG---DMNIKIADFGFSNEFTVGNKLDTFCGSPPYA 180
Query: 136 APEVLQFQRYD-EKVDMWSVGAILFELLNGYPPFSGRN 172
APE+ Q ++YD +VD+WS+G IL+ L++G PF G+N
Sbjct: 181 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 218
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 144 bits (364), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/208 (36%), Positives = 121/208 (58%), Gaps = 14/208 (6%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E+ + +NHPNI++LF+ + E ++LV+E+ +GG + Y+ HGR+ E+ AR +Q+
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI 122
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYM 135
+ ++ + I+HRDLK EN+L LD D+ +KIADFG S GN + CG+P Y
Sbjct: 123 VSAVQYCHQKFIVHRDLKAENLL---LDADMNIKIADFGFSNEFTFGNKLDAFCGAPPYA 179
Query: 136 APEVLQFQRYD-EKVDMWSVGAILFELLNGYPPFSGRNNVQL----------IVPALHPD 184
APE+ Q ++YD +VD+WS+G IL+ L++G PF G+N +L I + D
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTD 239
Query: 185 CVDMCLKLLSANTVDRLSFNEFYHHRFL 212
C ++ K L N R + + R++
Sbjct: 240 CENLLKKFLILNPSKRGTLEQIMKDRWM 267
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 144 bits (363), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 120/208 (57%), Gaps = 14/208 (6%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E+ + +NHPNI++LF+ + E ++L++E+ +GG + Y+ HGR+ E+ AR +Q+
Sbjct: 64 EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQI 123
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYM 135
+ ++ + I+HRDLK EN+L LD D+ +KIADFG S G + CG+P Y
Sbjct: 124 VSAVQYCHQKRIVHRDLKAENLL---LDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYA 180
Query: 136 APEVLQFQRYD-EKVDMWSVGAILFELLNGYPPFSGRNNVQLIVPALH----------PD 184
APE+ Q ++YD +VD+WS+G IL+ L++G PF G+N +L L D
Sbjct: 181 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTD 240
Query: 185 CVDMCLKLLSANTVDRLSFNEFYHHRFL 212
C ++ + L N + R + + R++
Sbjct: 241 CENLLKRFLVLNPIKRGTLEQIMKDRWI 268
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 142 bits (359), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/208 (36%), Positives = 120/208 (57%), Gaps = 14/208 (6%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E+ + +NHPNI++LF+ + E ++LV+E+ +GG + Y+ HG + E+ AR +Q+
Sbjct: 56 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQI 115
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYM 135
+ ++ + I+HRDLK EN+L LD D+ +KIADFG S GN + CGSP Y
Sbjct: 116 VSAVQYCHQKFIVHRDLKAENLL---LDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYA 172
Query: 136 APEVLQFQRYD-EKVDMWSVGAILFELLNGYPPFSGRNNVQL----------IVPALHPD 184
APE+ Q ++YD +VD+WS+G IL+ L++G PF G+N +L I + D
Sbjct: 173 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTD 232
Query: 185 CVDMCLKLLSANTVDRLSFNEFYHHRFL 212
C ++ K L N R + + R++
Sbjct: 233 CENLLKKFLILNPSKRGTLEQIMKDRWM 260
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 140 bits (353), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 115/207 (55%), Gaps = 14/207 (6%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E+ +NHPNI++LF+ + E ++LV E+ +GG + Y+ HGR E+ AR +Q+
Sbjct: 63 EVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQI 122
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYM 135
+ ++ + I+HRDLK EN+L LD D +KIADFG S GN + CG+P Y
Sbjct: 123 VSAVQYCHQKFIVHRDLKAENLL---LDADXNIKIADFGFSNEFTFGNKLDAFCGAPPYA 179
Query: 136 APEVLQFQRYD-EKVDMWSVGAILFELLNGYPPFSGRNNVQLIVPALH----------PD 184
APE+ Q ++YD +VD+WS+G IL+ L++G PF G+N +L L D
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYXSTD 239
Query: 185 CVDMCLKLLSANTVDRLSFNEFYHHRF 211
C ++ K L N R + + R+
Sbjct: 240 CENLLKKFLILNPSKRGTLEQIXKDRW 266
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 137 bits (346), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 79/217 (36%), Positives = 126/217 (58%), Gaps = 17/217 (7%)
Query: 1 MLKKLNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH 60
+LKK + H++ ++ E+++L + HP+II+L+D I +V+E+ AGG L YI
Sbjct: 46 LLKKSDMHMR--VEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEK 102
Query: 61 GRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLY 120
R+ E R+F QQ+ +E + H I+HRDLKPEN+L LDD++ +KIADFGLS +
Sbjct: 103 KRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLL---LDDNLNVKIADFGLSNIMT 159
Query: 121 PGNYAEKVCGSPLYMAPEVLQFQRY-DEKVDMWSVGAILFELLNGYPPFSGR-------- 171
GN+ + CGSP Y APEV+ + Y +VD+WS G +L+ +L G PF
Sbjct: 160 DGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKK 219
Query: 172 -NNVQLIVPA-LHPDCVDMCLKLLSANTVDRLSFNEF 206
N+ ++P L P + +++ A+ + R++ E
Sbjct: 220 VNSCVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEI 256
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 136 bits (343), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 103/162 (63%), Gaps = 1/162 (0%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E+ L ++HPNI++L++ F+ + +LV+E GG L I L + E A ++Q+
Sbjct: 71 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQV 130
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYM 135
+G L+ H+I+HRDLKPEN+LL D ++KI DFGLS G ++ G+ Y+
Sbjct: 131 LSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYI 190
Query: 136 APEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI 177
APEVL+ ++YDEK D+WS G IL+ LL GYPPF G+ + +++
Sbjct: 191 APEVLR-KKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEIL 231
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 136 bits (342), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 103/162 (63%), Gaps = 1/162 (0%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E+ L ++HPNI++L++ F+ + +LV+E GG L I L + E A ++Q+
Sbjct: 54 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQV 113
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYM 135
+G L+ H+I+HRDLKPEN+LL D ++KI DFGLS G ++ G+ Y+
Sbjct: 114 LSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYI 173
Query: 136 APEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI 177
APEVL+ ++YDEK D+WS G IL+ LL GYPPF G+ + +++
Sbjct: 174 APEVLR-KKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEIL 214
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 136 bits (342), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/229 (34%), Positives = 130/229 (56%), Gaps = 21/229 (9%)
Query: 2 LKKLNKH------LKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSS 55
LK +NK ++ ++ E+++L + HP+II+L+D ++++ I +V+E+ AG L
Sbjct: 44 LKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFD 102
Query: 56 YIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGL 115
YI ++ EQ AR+F QQ+ + +E + H I+HRDLKPEN+L LD+ + +KIADFGL
Sbjct: 103 YIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLL---LDEHLNVKIADFGL 159
Query: 116 SCTLYPGNYAEKVCGSPLYMAPEVLQFQRY-DEKVDMWSVGAILFELLNGYPPFSGR--- 171
S + GN+ + CGSP Y APEV+ + Y +VD+WS G IL+ +L PF
Sbjct: 160 SNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP 219
Query: 172 -------NNVQLIVPALHPDCVDMCLKLLSANTVDRLSFNEFYHHRFLR 213
N V + L P + ++L N ++R+S +E + +
Sbjct: 220 VLFKNISNGVYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFK 268
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 135 bits (341), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 124/225 (55%), Gaps = 15/225 (6%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E+ L ++HPNI++L+D F+ + +LV+E GG L I + E A ++Q+
Sbjct: 86 EVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQV 145
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYM 135
+G+ L+ H+I+HRDLKPEN+LL + D ++KI DFGLS ++ G+ Y+
Sbjct: 146 LSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYI 205
Query: 136 APEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIVPA--------------L 181
APEVL+ ++YDEK D+WS+G ILF LL GYPPF G+ + +++ +
Sbjct: 206 APEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNV 264
Query: 182 HPDCVDMCLKLLSANTVDRLSFNEFYHHRFLRRNSAILRAPFHIP 226
D+ ++L ++ R+S + H +++ + + +P
Sbjct: 265 SEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMCSKKESGIELP 309
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 135 bits (341), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 125/216 (57%), Gaps = 15/216 (6%)
Query: 9 LKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTA 68
++ ++ E+++L + HP+II+L+D ++++ I +V+E+ AG L YI ++ EQ A
Sbjct: 47 MQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEA 105
Query: 69 RKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKV 128
R+F QQ+ + +E + H I+HRDLKPEN+L LD+ + +KIADFGLS + GN+ +
Sbjct: 106 RRFFQQIISAVEYCHRHKIVHRDLKPENLL---LDEHLNVKIADFGLSNIMTDGNFLKTS 162
Query: 129 CGSPLYMAPEVLQFQRY-DEKVDMWSVGAILFELLNGYPPFSGR----------NNVQLI 177
CGSP Y APEV+ + Y +VD+WS G IL+ +L PF N V +
Sbjct: 163 CGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTL 222
Query: 178 VPALHPDCVDMCLKLLSANTVDRLSFNEFYHHRFLR 213
L P + ++L N ++R+S +E + +
Sbjct: 223 PKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFK 258
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 135 bits (341), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 125/216 (57%), Gaps = 15/216 (6%)
Query: 9 LKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTA 68
++ ++ E+++L + HP+II+L+D ++++ I +V+E+ AG L YI ++ EQ A
Sbjct: 56 MQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEA 114
Query: 69 RKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKV 128
R+F QQ+ + +E + H I+HRDLKPEN+L LD+ + +KIADFGLS + GN+ +
Sbjct: 115 RRFFQQIISAVEYCHRHKIVHRDLKPENLL---LDEHLNVKIADFGLSNIMTDGNFLKTS 171
Query: 129 CGSPLYMAPEVLQFQRY-DEKVDMWSVGAILFELLNGYPPFSGR----------NNVQLI 177
CGSP Y APEV+ + Y +VD+WS G IL+ +L PF N V +
Sbjct: 172 CGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTL 231
Query: 178 VPALHPDCVDMCLKLLSANTVDRLSFNEFYHHRFLR 213
L P + ++L N ++R+S +E + +
Sbjct: 232 PKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFK 267
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 135 bits (341), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/229 (34%), Positives = 130/229 (56%), Gaps = 21/229 (9%)
Query: 2 LKKLNKH------LKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSS 55
LK +NK ++ ++ E+++L + HP+II+L+D ++++ I +V+E+ AG L
Sbjct: 38 LKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFD 96
Query: 56 YIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGL 115
YI ++ EQ AR+F QQ+ + +E + H I+HRDLKPEN+L LD+ + +KIADFGL
Sbjct: 97 YIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLL---LDEHLNVKIADFGL 153
Query: 116 SCTLYPGNYAEKVCGSPLYMAPEVLQFQRY-DEKVDMWSVGAILFELLNGYPPFSGR--- 171
S + GN+ + CGSP Y APEV+ + Y +VD+WS G IL+ +L PF
Sbjct: 154 SNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP 213
Query: 172 -------NNVQLIVPALHPDCVDMCLKLLSANTVDRLSFNEFYHHRFLR 213
N V + L P + ++L N ++R+S +E + +
Sbjct: 214 VLFKNISNGVYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFK 262
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 135 bits (341), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 119/216 (55%), Gaps = 15/216 (6%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E+ L ++HPNI++LF+ + + ++V E GG L I R E A + ++Q+
Sbjct: 71 EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQV 130
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYM 135
+G+ ++ H+I+HRDLKPENILL + D +KI DFGLS + G+ Y+
Sbjct: 131 FSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYI 190
Query: 136 APEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI-----------VP---AL 181
APEVL+ YDEK D+WS G IL+ LL+G PPF G+N ++ +P +
Sbjct: 191 APEVLR-GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTI 249
Query: 182 HPDCVDMCLKLLSANTVDRLSFNEFYHHRFLRRNSA 217
D D+ K+L+ + R++ + H ++++ S+
Sbjct: 250 SDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSS 285
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 135 bits (340), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 119/216 (55%), Gaps = 15/216 (6%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E+ L ++HPNI++LF+ + + ++V E GG L I R E A + ++Q+
Sbjct: 71 EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQV 130
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYM 135
+G+ ++ H+I+HRDLKPENILL + D +KI DFGLS + G+ Y+
Sbjct: 131 FSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYI 190
Query: 136 APEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI-----------VP---AL 181
APEVL+ YDEK D+WS G IL+ LL+G PPF G+N ++ +P +
Sbjct: 191 APEVLR-GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTI 249
Query: 182 HPDCVDMCLKLLSANTVDRLSFNEFYHHRFLRRNSA 217
D D+ K+L+ + R++ + H ++++ S+
Sbjct: 250 SDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSS 285
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 135 bits (340), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 119/216 (55%), Gaps = 15/216 (6%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E+ L ++HPNI++LF+ + + ++V E GG L I R E A + ++Q+
Sbjct: 71 EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQV 130
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYM 135
+G+ ++ H+I+HRDLKPENILL + D +KI DFGLS + G+ Y+
Sbjct: 131 FSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYI 190
Query: 136 APEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI-----------VP---AL 181
APEVL+ YDEK D+WS G IL+ LL+G PPF G+N ++ +P +
Sbjct: 191 APEVLR-GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTI 249
Query: 182 HPDCVDMCLKLLSANTVDRLSFNEFYHHRFLRRNSA 217
D D+ K+L+ + R++ + H ++++ S+
Sbjct: 250 SDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSS 285
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 135 bits (339), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 102/162 (62%), Gaps = 1/162 (0%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E++ L S++HPNII+LFD F+ + +LV EF GG L I + E A ++Q+
Sbjct: 96 EISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQI 155
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYM 135
+G+ L+ H+I+HRD+KPENILL + + +KI DFGLS G+ Y+
Sbjct: 156 LSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYI 215
Query: 136 APEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI 177
APEVL+ ++Y+EK D+WS G I++ LL GYPPF G+N+ +I
Sbjct: 216 APEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDII 256
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 132 bits (331), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 118/231 (51%), Gaps = 20/231 (8%)
Query: 2 LKKLNKHLKSCLDC------ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSS 55
+K LN+ LD E+ L HP+II+L+ F+V+E+ +GG L
Sbjct: 41 VKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFD 100
Query: 56 YIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGL 115
YI HGRV E AR+ QQ+ + ++ + H ++HRDLKPEN+L LD + KIADFGL
Sbjct: 101 YICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVL---LDAHMNAKIADFGL 157
Query: 116 SCTLYPGNYAEKVCGSPLYMAPEVLQFQRY-DEKVDMWSVGAILFELLNGYPPFSG---- 170
S + G + CGSP Y APEV+ + Y +VD+WS G IL+ LL G PF
Sbjct: 158 SNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP 217
Query: 171 ------RNNVQLIVPALHPDCVDMCLKLLSANTVDRLSFNEFYHHRFLRRN 215
R V I L+ + + +L + + R + + H + +++
Sbjct: 218 TLFKKIRGGVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQD 268
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 131 bits (330), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 118/231 (51%), Gaps = 20/231 (8%)
Query: 2 LKKLNKHLKSCLDC------ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSS 55
+K LN+ LD E+ L HP+II+L+ F+V+E+ +GG L
Sbjct: 41 VKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFD 100
Query: 56 YIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGL 115
YI HGRV E AR+ QQ+ + ++ + H ++HRDLKPEN+L LD + KIADFGL
Sbjct: 101 YICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVL---LDAHMNAKIADFGL 157
Query: 116 SCTLYPGNYAEKVCGSPLYMAPEVLQFQRY-DEKVDMWSVGAILFELLNGYPPFSG---- 170
S + G + CGSP Y APEV+ + Y +VD+WS G IL+ LL G PF
Sbjct: 158 SNMMSDGEFLRDSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP 217
Query: 171 ------RNNVQLIVPALHPDCVDMCLKLLSANTVDRLSFNEFYHHRFLRRN 215
R V I L+ + + +L + + R + + H + +++
Sbjct: 218 TLFKKIRGGVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQD 268
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 130 bits (327), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 104/176 (59%)
Query: 1 MLKKLNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH 60
+ KK + + ++ E+ L + HPNI+ L D +++ ++L+++ +GG L I
Sbjct: 51 IAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEK 110
Query: 61 GRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLY 120
G E+ A + + Q+ ++ L+ I+HRDLKPEN+L LD+D + I+DFGLS
Sbjct: 111 GFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMED 170
Query: 121 PGNYAEKVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL 176
PG+ CG+P Y+APEVL + Y + VD WS+G I + LL GYPPF N+ +L
Sbjct: 171 PGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKL 226
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 130 bits (326), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 123/231 (53%), Gaps = 20/231 (8%)
Query: 2 LKKLNKHLKSCLDC------ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSS 55
+K LN+ LD E+ L HP+II+L+ + IF+V+E+ +GG L
Sbjct: 46 VKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFD 105
Query: 56 YIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGL 115
YI +GR+ E+ +R+ QQ+ +G++ + H ++HRDLKPEN+L LD + KIADFGL
Sbjct: 106 YICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVL---LDAHMNAKIADFGL 162
Query: 116 SCTLYPGNYAEKVCGSPLYMAPEVLQFQRY-DEKVDMWSVGAILFELLNGYPPFSGRNNV 174
S + G + CGSP Y APEV+ + Y +VD+WS G IL+ LL G PF +
Sbjct: 163 SNMMSDGEFLRXSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP 222
Query: 175 QLI---------VPA-LHPDCVDMCLKLLSANTVDRLSFNEFYHHRFLRRN 215
L P L+P + + +L + + R + + H + +++
Sbjct: 223 TLFKKICDGIFYTPQYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQD 273
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 130 bits (326), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 100/167 (59%)
Query: 10 KSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
+ ++ E+ L + HPNI+ L D +++ ++L+++ +GG L I G E+ A
Sbjct: 60 EGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS 119
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVC 129
+ + Q+ ++ L+ I+HRDLKPEN+L LD+D + I+DFGLS PG+ C
Sbjct: 120 RLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTAC 179
Query: 130 GSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL 176
G+P Y+APEVL + Y + VD WS+G I + LL GYPPF N+ +L
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKL 226
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 130 bits (326), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 100/167 (59%)
Query: 10 KSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
+ ++ E+ L + HPNI+ L D +++ ++L+++ +GG L I G E+ A
Sbjct: 60 EGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS 119
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVC 129
+ + Q+ ++ L+ I+HRDLKPEN+L LD+D + I+DFGLS PG+ C
Sbjct: 120 RLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTAC 179
Query: 130 GSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL 176
G+P Y+APEVL + Y + VD WS+G I + LL GYPPF N+ +L
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKL 226
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 129 bits (325), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 100/167 (59%)
Query: 10 KSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
+ ++ E+ L + HPNI+ L D +++ ++L+++ +GG L I G E+ A
Sbjct: 60 EGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS 119
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVC 129
+ + Q+ ++ L+ I+HRDLKPEN+L LD+D + I+DFGLS PG+ C
Sbjct: 120 RLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTAC 179
Query: 130 GSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL 176
G+P Y+APEVL + Y + VD WS+G I + LL GYPPF N+ +L
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKL 226
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 129 bits (325), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 120/219 (54%), Gaps = 19/219 (8%)
Query: 13 LDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL 72
++ E+ L +NHP II++ + F AE+ ++V+E GG L + + R+ E T + +
Sbjct: 62 VETEIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYF 120
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSP 132
Q+ ++ L+ + IIHRDLKPEN+LLS ++D ++KI DFG S L + +CG+P
Sbjct: 121 YQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTP 180
Query: 133 LYMAPEVL---QFQRYDEKVDMWSVGAILFELLNGYPPFSG-RNNVQL----------IV 178
Y+APEVL Y+ VD WS+G ILF L+GYPPFS R V L +
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI 240
Query: 179 PALHPD----CVDMCLKLLSANTVDRLSFNEFYHHRFLR 213
P + + +D+ KLL + R + E H +L+
Sbjct: 241 PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 129 bits (325), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 120/219 (54%), Gaps = 19/219 (8%)
Query: 13 LDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL 72
++ E+ L +NHP II++ + F AE+ ++V+E GG L + + R+ E T + +
Sbjct: 61 VETEIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYF 119
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSP 132
Q+ ++ L+ + IIHRDLKPEN+LLS ++D ++KI DFG S L + +CG+P
Sbjct: 120 YQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTP 179
Query: 133 LYMAPEVL---QFQRYDEKVDMWSVGAILFELLNGYPPFSG-RNNVQL----------IV 178
Y+APEVL Y+ VD WS+G ILF L+GYPPFS R V L +
Sbjct: 180 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI 239
Query: 179 PALHPD----CVDMCLKLLSANTVDRLSFNEFYHHRFLR 213
P + + +D+ KLL + R + E H +L+
Sbjct: 240 PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 278
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 129 bits (325), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 120/219 (54%), Gaps = 19/219 (8%)
Query: 13 LDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL 72
++ E+ L +NHP II++ + F AE+ ++V+E GG L + + R+ E T + +
Sbjct: 62 VETEIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYF 120
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSP 132
Q+ ++ L+ + IIHRDLKPEN+LLS ++D ++KI DFG S L + +CG+P
Sbjct: 121 YQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTP 180
Query: 133 LYMAPEVL---QFQRYDEKVDMWSVGAILFELLNGYPPFSG-RNNVQL----------IV 178
Y+APEVL Y+ VD WS+G ILF L+GYPPFS R V L +
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI 240
Query: 179 PALHPD----CVDMCLKLLSANTVDRLSFNEFYHHRFLR 213
P + + +D+ KLL + R + E H +L+
Sbjct: 241 PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 129 bits (324), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 120/219 (54%), Gaps = 19/219 (8%)
Query: 13 LDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL 72
++ E+ L +NHP II++ + F AE+ ++V+E GG L + + R+ E T + +
Sbjct: 62 VETEIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYF 120
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSP 132
Q+ ++ L+ + IIHRDLKPEN+LLS ++D ++KI DFG S L + +CG+P
Sbjct: 121 YQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTP 180
Query: 133 LYMAPEVL---QFQRYDEKVDMWSVGAILFELLNGYPPFSG-RNNVQL----------IV 178
Y+APEVL Y+ VD WS+G ILF L+GYPPFS R V L +
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI 240
Query: 179 PALHPD----CVDMCLKLLSANTVDRLSFNEFYHHRFLR 213
P + + +D+ KLL + R + E H +L+
Sbjct: 241 PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 129 bits (324), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 120/219 (54%), Gaps = 19/219 (8%)
Query: 13 LDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL 72
++ E+ L +NHP II++ + F AE+ ++V+E GG L + + R+ E T + +
Sbjct: 68 VETEIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYF 126
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSP 132
Q+ ++ L+ + IIHRDLKPEN+LLS ++D ++KI DFG S L + +CG+P
Sbjct: 127 YQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTP 186
Query: 133 LYMAPEVL---QFQRYDEKVDMWSVGAILFELLNGYPPFSG-RNNVQL----------IV 178
Y+APEVL Y+ VD WS+G ILF L+GYPPFS R V L +
Sbjct: 187 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI 246
Query: 179 PALHPD----CVDMCLKLLSANTVDRLSFNEFYHHRFLR 213
P + + +D+ KLL + R + E H +L+
Sbjct: 247 PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 285
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 129 bits (323), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 120/219 (54%), Gaps = 19/219 (8%)
Query: 13 LDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL 72
++ E+ L +NHP II++ + F AE+ ++V+E GG L + + R+ E T + +
Sbjct: 201 VETEIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYF 259
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSP 132
Q+ ++ L+ + IIHRDLKPEN+LLS ++D ++KI DFG S L + +CG+P
Sbjct: 260 YQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTP 319
Query: 133 LYMAPEVL---QFQRYDEKVDMWSVGAILFELLNGYPPFSG-RNNVQL----------IV 178
Y+APEVL Y+ VD WS+G ILF L+GYPPFS R V L +
Sbjct: 320 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI 379
Query: 179 PALHPD----CVDMCLKLLSANTVDRLSFNEFYHHRFLR 213
P + + +D+ KLL + R + E H +L+
Sbjct: 380 PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 418
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 128 bits (322), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 120/219 (54%), Gaps = 19/219 (8%)
Query: 13 LDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL 72
++ E+ L +NHP II++ + F AE+ ++V+E GG L + + R+ E T + +
Sbjct: 187 VETEIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYF 245
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSP 132
Q+ ++ L+ + IIHRDLKPEN+LLS ++D ++KI DFG S L + +CG+P
Sbjct: 246 YQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTP 305
Query: 133 LYMAPEVL---QFQRYDEKVDMWSVGAILFELLNGYPPFSG-RNNVQL----------IV 178
Y+APEVL Y+ VD WS+G ILF L+GYPPFS R V L +
Sbjct: 306 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI 365
Query: 179 PALHPD----CVDMCLKLLSANTVDRLSFNEFYHHRFLR 213
P + + +D+ KLL + R + E H +L+
Sbjct: 366 PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 404
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 128 bits (322), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 103/178 (57%), Gaps = 10/178 (5%)
Query: 7 KHLKSCLDCELNFLSSVN-HPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPE 65
+ L+ E++ L V+ HPNII+L D ++ FLV + G L Y+ + E
Sbjct: 64 QELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSE 123
Query: 66 QTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYA 125
+ RK ++ L + L+ +I+HRDLKPENIL LDDD+ +K+ DFG SC L PG
Sbjct: 124 KETRKIMRALLEVICALHKLNIVHRDLKPENIL---LDDDMNIKLTDFGFSCQLDPGEKL 180
Query: 126 EKVCGSPLYMAPEVLQFQR------YDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI 177
+VCG+P Y+APE+++ Y ++VDMWS G I++ LL G PPF R + ++
Sbjct: 181 REVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLML 238
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 128 bits (322), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 103/178 (57%), Gaps = 10/178 (5%)
Query: 7 KHLKSCLDCELNFLSSVN-HPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPE 65
+ L+ E++ L V+ HPNII+L D ++ FLV + G L Y+ + E
Sbjct: 51 QELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSE 110
Query: 66 QTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYA 125
+ RK ++ L + L+ +I+HRDLKPENIL LDDD+ +K+ DFG SC L PG
Sbjct: 111 KETRKIMRALLEVICALHKLNIVHRDLKPENIL---LDDDMNIKLTDFGFSCQLDPGEKL 167
Query: 126 EKVCGSPLYMAPEVLQFQR------YDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI 177
+VCG+P Y+APE+++ Y ++VDMWS G I++ LL G PPF R + ++
Sbjct: 168 REVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLML 225
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 128 bits (321), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 102/178 (57%), Gaps = 10/178 (5%)
Query: 7 KHLKSCLDCELNFLSSVN-HPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPE 65
+ L+ E++ L V+ HPNII+L D ++ FLV + G L Y+ + E
Sbjct: 64 QELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSE 123
Query: 66 QTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYA 125
+ RK ++ L + L+ +I+HRDLKPENIL LDDD+ +K+ DFG SC L PG
Sbjct: 124 KETRKIMRALLEVICALHKLNIVHRDLKPENIL---LDDDMNIKLTDFGFSCQLDPGEKL 180
Query: 126 EKVCGSPLYMAPEVLQFQR------YDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI 177
VCG+P Y+APE+++ Y ++VDMWS G I++ LL G PPF R + ++
Sbjct: 181 RSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLML 238
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 127 bits (318), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 119/229 (51%), Gaps = 24/229 (10%)
Query: 7 KHLKSCLDCELNFLSSV-NHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPE 65
+ ++ E + L V HP+II L D++++ + +FLV + G L Y+ + E
Sbjct: 140 EEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSE 199
Query: 66 QTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYA 125
+ R ++ L + L++++I+HRDLKPENIL LDD++ ++++DFG SC L PG
Sbjct: 200 KETRSIMRSLLEAVSFLHANNIVHRDLKPENIL---LDDNMQIRLSDFGFSCHLEPGEKL 256
Query: 126 EKVCGSPLYMAPEVLQFQR------YDEKVDMWSVGAILFELLNGYPPFSGRNNV----- 174
++CG+P Y+APE+L+ Y ++VD+W+ G ILF LL G PPF R +
Sbjct: 257 RELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRM 316
Query: 175 ------QLIVPAL---HPDCVDMCLKLLSANTVDRLSFNEFYHHRFLRR 214
Q P D+ +LL + RL+ + H F R
Sbjct: 317 IMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFER 365
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 127 bits (318), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 101/174 (58%)
Query: 3 KKLNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGR 62
KK K +S ++ E+ L + H NI+ L D +++ N ++LV++ +GG L I G
Sbjct: 57 KKALKGKESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGF 116
Query: 63 VPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPG 122
E+ A ++Q+ + L+ I+HRDLKPEN+L D++ + I+DFGLS G
Sbjct: 117 YTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKG 176
Query: 123 NYAEKVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL 176
+ CG+P Y+APEVL + Y + VD WS+G I + LL GYPPF N+ +L
Sbjct: 177 DVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKL 230
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 126 bits (317), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 98/172 (56%), Gaps = 1/172 (0%)
Query: 6 NKHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPE 65
K K L E+ L ++HPNI++L++ F+ + +LV E GG L I R E
Sbjct: 72 QKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSE 131
Query: 66 QTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYA 125
A + ++Q+ +G+ ++ + I+HRDLKPEN+LL D ++I DFGLS
Sbjct: 132 VDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM 191
Query: 126 EKVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI 177
+ G+ Y+APEVL YDEK D+WS G IL+ LL+G PPF+G N ++
Sbjct: 192 KDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDIL 242
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 126 bits (317), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 98/172 (56%), Gaps = 1/172 (0%)
Query: 6 NKHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPE 65
K K L E+ L ++HPNI++L++ F+ + +LV E GG L I R E
Sbjct: 66 QKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSE 125
Query: 66 QTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYA 125
A + ++Q+ +G+ ++ + I+HRDLKPEN+LL D ++I DFGLS
Sbjct: 126 VDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM 185
Query: 126 EKVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI 177
+ G+ Y+APEVL YDEK D+WS G IL+ LL+G PPF+G N ++
Sbjct: 186 KDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDIL 236
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 126 bits (317), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 76/231 (32%), Positives = 117/231 (50%), Gaps = 32/231 (13%)
Query: 20 LSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQLGAGL 79
LS V HP IIR++ FQ IF+++++ GG L S +R R P A+ + ++ L
Sbjct: 60 LSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLAL 119
Query: 80 EILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEV 139
E L+S II+RDLKPENIL LD + +KI DFG + Y + +CG+P Y+APEV
Sbjct: 120 EYLHSKDIIYRDLKPENIL---LDKNGHIKITDFGFAK--YVPDVTYXLCGTPDYIAPEV 174
Query: 140 LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL----------IVPALHPDCVDMC 189
+ + Y++ +D WS G +++E+L GY PF N ++ P + D D+
Sbjct: 175 VSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNEDVKDLL 234
Query: 190 LKLLSANTVDRLS--------------FNEFYHHRFLRRNSAILRAPFHIP 226
+L++ + RL F E + L RN + P+ P
Sbjct: 235 SRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVWEKLLSRN---IETPYEPP 282
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 126 bits (316), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 98/172 (56%), Gaps = 1/172 (0%)
Query: 6 NKHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPE 65
K K L E+ L ++HPNI++L++ F+ + +LV E GG L I R E
Sbjct: 89 QKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSE 148
Query: 66 QTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYA 125
A + ++Q+ +G+ ++ + I+HRDLKPEN+LL D ++I DFGLS
Sbjct: 149 VDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM 208
Query: 126 EKVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI 177
+ G+ Y+APEVL YDEK D+WS G IL+ LL+G PPF+G N ++
Sbjct: 209 KDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDIL 259
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 126 bits (316), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 98/172 (56%), Gaps = 1/172 (0%)
Query: 6 NKHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPE 65
K K L E+ L ++HPNI++L++ F+ + +LV E GG L I R E
Sbjct: 90 QKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSE 149
Query: 66 QTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYA 125
A + ++Q+ +G+ ++ + I+HRDLKPEN+LL D ++I DFGLS
Sbjct: 150 VDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM 209
Query: 126 EKVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI 177
+ G+ Y+APEVL YDEK D+WS G IL+ LL+G PPF+G N ++
Sbjct: 210 KDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDIL 260
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 114/222 (51%), Gaps = 14/222 (6%)
Query: 13 LDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL 72
L E+ S + HPNI+R+++ F I+L++EF G L ++ HGR EQ + F+
Sbjct: 61 LRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFM 120
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSP 132
++L L + +IHRD+KPEN+L+ + LKIADFG S P +CG+
Sbjct: 121 EELADALHYCHERKVIHRDIKPENLLMGYKGE---LKIADFGWSVHA-PSLRRRXMCGTL 176
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRN---------NVQLIVPALHP 183
Y+ PE+++ + +DEKVD+W G + +E L G PPF + NV L P
Sbjct: 177 DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLS 236
Query: 184 D-CVDMCLKLLSANTVDRLSFNEFYHHRFLRRNSAILRAPFH 224
D D+ KLL + RL H +++ NS + P +
Sbjct: 237 DGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSRRVLPPVY 278
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 125 bits (314), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 114/222 (51%), Gaps = 14/222 (6%)
Query: 13 LDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL 72
L E+ S + HPNI+R+++ F I+L++EF G L ++ HGR EQ + F+
Sbjct: 61 LRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFM 120
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSP 132
++L L + +IHRD+KPEN+L+ + LKIADFG S P +CG+
Sbjct: 121 EELADALHYCHERKVIHRDIKPENLLMGYKGE---LKIADFGWSVHA-PSLRRRXMCGTL 176
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRN---------NVQLIVPALHP 183
Y+ PE+++ + +DEKVD+W G + +E L G PPF + NV L P
Sbjct: 177 DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLS 236
Query: 184 D-CVDMCLKLLSANTVDRLSFNEFYHHRFLRRNSAILRAPFH 224
D D+ KLL + RL H +++ NS + P +
Sbjct: 237 DGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSRRVLPPVY 278
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 125 bits (314), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 114/222 (51%), Gaps = 14/222 (6%)
Query: 13 LDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL 72
L E+ S + HPNI+R+++ F I+L++EF G L ++ HGR EQ + F+
Sbjct: 62 LRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFM 121
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSP 132
++L L + +IHRD+KPEN+L+ + LKIADFG S P +CG+
Sbjct: 122 EELADALHYCHERKVIHRDIKPENLLMGYKGE---LKIADFGWSVHA-PSLRRRXMCGTL 177
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRN---------NVQLIVPALHP 183
Y+ PE+++ + +DEKVD+W G + +E L G PPF + NV L P
Sbjct: 178 DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLS 237
Query: 184 D-CVDMCLKLLSANTVDRLSFNEFYHHRFLRRNSAILRAPFH 224
D D+ KLL + RL H +++ NS + P +
Sbjct: 238 DGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSRRVLPPVY 279
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 124 bits (311), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 96/172 (55%), Gaps = 1/172 (0%)
Query: 6 NKHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPE 65
K K L E+ L ++HPNI +L++ F+ + +LV E GG L I R E
Sbjct: 66 QKTDKESLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSE 125
Query: 66 QTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYA 125
A + ++Q+ +G+ + + I+HRDLKPEN+LL D ++I DFGLS
Sbjct: 126 VDAARIIRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKX 185
Query: 126 EKVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI 177
+ G+ Y+APEVL YDEK D+WS G IL+ LL+G PPF+G N ++
Sbjct: 186 KDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDIL 236
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 124 bits (310), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 118/225 (52%), Gaps = 27/225 (12%)
Query: 26 PNIIRLFDAFQ----AENCIFLVVEFCAGGNLSSYIRLHG--RVPEQTARKFLQQLGAGL 79
P+I+ + D ++ + C+ +++E GG L S I+ G E+ A + ++ +G +
Sbjct: 82 PHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAI 141
Query: 80 EILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEV 139
+ L+SH+I HRD+KPEN+L + + D +LK+ DFG + N + C +P Y+APEV
Sbjct: 142 QFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKET-TQNALQTPCYTPYYVAPEV 200
Query: 140 LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIVPALH----------------- 182
L ++YD+ DMWS+G I++ LL G+PPF N Q I P +
Sbjct: 201 LGPEKYDKSCDMWSLGVIMYILLCGFPPFYS-NTGQAISPGMKRRIRLGQYGFPNPEWSE 259
Query: 183 --PDCVDMCLKLLSANTVDRLSFNEFYHHRFLRRNSAILRAPFHI 225
D + LL + +RL+ +F +H ++ ++ + + P H
Sbjct: 260 VSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPLHT 304
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 124 bits (310), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 118/225 (52%), Gaps = 27/225 (12%)
Query: 26 PNIIRLFDAFQ----AENCIFLVVEFCAGGNLSSYIRLHG--RVPEQTARKFLQQLGAGL 79
P+I+ + D ++ + C+ +++E GG L S I+ G E+ A + ++ +G +
Sbjct: 63 PHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAI 122
Query: 80 EILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEV 139
+ L+SH+I HRD+KPEN+L + + D +LK+ DFG + N + C +P Y+APEV
Sbjct: 123 QFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKET-TQNALQTPCYTPYYVAPEV 181
Query: 140 LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIVPALH----------------- 182
L ++YD+ DMWS+G I++ LL G+PPF N Q I P +
Sbjct: 182 LGPEKYDKSCDMWSLGVIMYILLCGFPPFYS-NTGQAISPGMKRRIRLGQYGFPNPEWSE 240
Query: 183 --PDCVDMCLKLLSANTVDRLSFNEFYHHRFLRRNSAILRAPFHI 225
D + LL + +RL+ +F +H ++ ++ + + P H
Sbjct: 241 VSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPLHT 285
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 123 bits (309), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 132/248 (53%), Gaps = 27/248 (10%)
Query: 2 LKKLNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQ----AENCIFLVVEFCAGGNLSSYI 57
LK L K+ + EL++ +S P+I+R+ D ++ C+ +V+E GG L S I
Sbjct: 46 LKMLQDCPKARREVELHWRAS-QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRI 104
Query: 58 RLHG--RVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGL 115
+ G E+ A + ++ +G ++ L+S +I HRD+KPEN+L + + +LK+ DFG
Sbjct: 105 QDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF 164
Query: 116 SCTLYPGNYAEKVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQ 175
+ N + C +P Y+APEVL ++YD+ DMWS+G I++ LL GYPPF N+
Sbjct: 165 AKETTSHNSLTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS-NHGL 223
Query: 176 LIVPAL------------HPDC------VDMCLK-LLSANTVDRLSFNEFYHHRFLRRNS 216
I P + +P+ V M ++ LL R++ EF +H ++ +++
Sbjct: 224 AISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 283
Query: 217 AILRAPFH 224
+ + P H
Sbjct: 284 KVPQTPLH 291
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 123 bits (308), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 131/248 (52%), Gaps = 27/248 (10%)
Query: 2 LKKLNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQ----AENCIFLVVEFCAGGNLSSYI 57
LK L K+ + EL++ +S P+I+R+ D ++ C+ +V+E GG L S I
Sbjct: 52 LKMLQDCPKARREVELHWRAS-QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRI 110
Query: 58 RLHG--RVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGL 115
+ G E+ A + ++ +G ++ L+S +I HRD+KPEN+L + + +LK+ DFG
Sbjct: 111 QDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF 170
Query: 116 SCTLYPGNYAEKVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQ 175
+ N C +P Y+APEVL ++YD+ DMWS+G I++ LL GYPPF N+
Sbjct: 171 AKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS-NHGL 229
Query: 176 LIVPAL------------HPDC------VDMCLK-LLSANTVDRLSFNEFYHHRFLRRNS 216
I P + +P+ V M ++ LL R++ EF +H ++ +++
Sbjct: 230 AISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 289
Query: 217 AILRAPFH 224
+ + P H
Sbjct: 290 KVPQTPLH 297
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 123 bits (308), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 131/248 (52%), Gaps = 27/248 (10%)
Query: 2 LKKLNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQ----AENCIFLVVEFCAGGNLSSYI 57
LK L K+ + EL++ +S P+I+R+ D ++ C+ +V+E GG L S I
Sbjct: 46 LKMLQDCPKARREVELHWRAS-QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRI 104
Query: 58 RLHG--RVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGL 115
+ G E+ A + ++ +G ++ L+S +I HRD+KPEN+L + + +LK+ DFG
Sbjct: 105 QDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF 164
Query: 116 SCTLYPGNYAEKVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQ 175
+ N C +P Y+APEVL ++YD+ DMWS+G I++ LL GYPPF N+
Sbjct: 165 AKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS-NHGL 223
Query: 176 LIVPAL------------HPDC------VDMCLK-LLSANTVDRLSFNEFYHHRFLRRNS 216
I P + +P+ V M ++ LL R++ EF +H ++ +++
Sbjct: 224 AISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 283
Query: 217 AILRAPFH 224
+ + P H
Sbjct: 284 KVPQTPLH 291
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 123 bits (308), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 113/215 (52%), Gaps = 14/215 (6%)
Query: 13 LDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL 72
L E+ S + HPNI+RL+ F ++L++E+ G + ++ R EQ ++
Sbjct: 59 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYI 118
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSP 132
+L L +S +IHRD+KPEN+LL + LKIADFG S P + + +CG+
Sbjct: 119 TELANALSYCHSKRVIHRDIKPENLLLGSNGE---LKIADFGWSVHA-PSSRRDTLCGTL 174
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI-----VPALHPDCV- 186
Y+ PE+++ + +DEKVD+WS+G + +E L G PPF + V PD V
Sbjct: 175 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVT 234
Query: 187 ----DMCLKLLSANTVDRLSFNEFYHHRFLRRNSA 217
D+ +LL N RL+ E H +++ NS+
Sbjct: 235 EGARDLISRLLKHNASQRLTLAEVLEHPWIKANSS 269
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 123 bits (308), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 131/248 (52%), Gaps = 27/248 (10%)
Query: 2 LKKLNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQ----AENCIFLVVEFCAGGNLSSYI 57
LK L K+ + EL++ +S P+I+R+ D ++ C+ +V+E GG L S I
Sbjct: 47 LKMLQDCPKARREVELHWRAS-QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRI 105
Query: 58 RLHG--RVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGL 115
+ G E+ A + ++ +G ++ L+S +I HRD+KPEN+L + + +LK+ DFG
Sbjct: 106 QDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF 165
Query: 116 SCTLYPGNYAEKVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQ 175
+ N C +P Y+APEVL ++YD+ DMWS+G I++ LL GYPPF N+
Sbjct: 166 AKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS-NHGL 224
Query: 176 LIVPAL------------HPDC------VDMCLK-LLSANTVDRLSFNEFYHHRFLRRNS 216
I P + +P+ V M ++ LL R++ EF +H ++ +++
Sbjct: 225 AISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 284
Query: 217 AILRAPFH 224
+ + P H
Sbjct: 285 KVPQTPLH 292
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 123 bits (308), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 131/248 (52%), Gaps = 27/248 (10%)
Query: 2 LKKLNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQ----AENCIFLVVEFCAGGNLSSYI 57
LK L K+ + EL++ +S P+I+R+ D ++ C+ +V+E GG L S I
Sbjct: 48 LKMLQDCPKARREVELHWRAS-QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRI 106
Query: 58 RLHG--RVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGL 115
+ G E+ A + ++ +G ++ L+S +I HRD+KPEN+L + + +LK+ DFG
Sbjct: 107 QDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF 166
Query: 116 SCTLYPGNYAEKVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQ 175
+ N C +P Y+APEVL ++YD+ DMWS+G I++ LL GYPPF N+
Sbjct: 167 AKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS-NHGL 225
Query: 176 LIVPAL------------HPDC------VDMCLK-LLSANTVDRLSFNEFYHHRFLRRNS 216
I P + +P+ V M ++ LL R++ EF +H ++ +++
Sbjct: 226 AISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 285
Query: 217 AILRAPFH 224
+ + P H
Sbjct: 286 KVPQTPLH 293
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 123 bits (308), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 131/248 (52%), Gaps = 27/248 (10%)
Query: 2 LKKLNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQ----AENCIFLVVEFCAGGNLSSYI 57
LK L K+ + EL++ +S P+I+R+ D ++ C+ +V+E GG L S I
Sbjct: 48 LKMLQDCPKARREVELHWRAS-QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRI 106
Query: 58 RLHG--RVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGL 115
+ G E+ A + ++ +G ++ L+S +I HRD+KPEN+L + + +LK+ DFG
Sbjct: 107 QDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF 166
Query: 116 SCTLYPGNYAEKVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQ 175
+ N C +P Y+APEVL ++YD+ DMWS+G I++ LL GYPPF N+
Sbjct: 167 AKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS-NHGL 225
Query: 176 LIVPAL------------HPDC------VDMCLK-LLSANTVDRLSFNEFYHHRFLRRNS 216
I P + +P+ V M ++ LL R++ EF +H ++ +++
Sbjct: 226 AISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 285
Query: 217 AILRAPFH 224
+ + P H
Sbjct: 286 KVPQTPLH 293
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 123 bits (308), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 131/248 (52%), Gaps = 27/248 (10%)
Query: 2 LKKLNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQ----AENCIFLVVEFCAGGNLSSYI 57
LK L K+ + EL++ +S P+I+R+ D ++ C+ +V+E GG L S I
Sbjct: 54 LKMLQDCPKARREVELHWRAS-QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRI 112
Query: 58 RLHG--RVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGL 115
+ G E+ A + ++ +G ++ L+S +I HRD+KPEN+L + + +LK+ DFG
Sbjct: 113 QDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF 172
Query: 116 SCTLYPGNYAEKVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQ 175
+ N C +P Y+APEVL ++YD+ DMWS+G I++ LL GYPPF N+
Sbjct: 173 AKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS-NHGL 231
Query: 176 LIVPAL------------HPDC------VDMCLK-LLSANTVDRLSFNEFYHHRFLRRNS 216
I P + +P+ V M ++ LL R++ EF +H ++ +++
Sbjct: 232 AISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 291
Query: 217 AILRAPFH 224
+ + P H
Sbjct: 292 KVPQTPLH 299
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 123 bits (308), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 131/248 (52%), Gaps = 27/248 (10%)
Query: 2 LKKLNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQ----AENCIFLVVEFCAGGNLSSYI 57
LK L K+ + EL++ +S P+I+R+ D ++ C+ +V+E GG L S I
Sbjct: 53 LKMLQDCPKARREVELHWRAS-QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRI 111
Query: 58 RLHG--RVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGL 115
+ G E+ A + ++ +G ++ L+S +I HRD+KPEN+L + + +LK+ DFG
Sbjct: 112 QDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF 171
Query: 116 SCTLYPGNYAEKVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQ 175
+ N C +P Y+APEVL ++YD+ DMWS+G I++ LL GYPPF N+
Sbjct: 172 AKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS-NHGL 230
Query: 176 LIVPAL------------HPDC------VDMCLK-LLSANTVDRLSFNEFYHHRFLRRNS 216
I P + +P+ V M ++ LL R++ EF +H ++ +++
Sbjct: 231 AISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 290
Query: 217 AILRAPFH 224
+ + P H
Sbjct: 291 KVPQTPLH 298
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 123 bits (308), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 131/248 (52%), Gaps = 27/248 (10%)
Query: 2 LKKLNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQ----AENCIFLVVEFCAGGNLSSYI 57
LK L K+ + EL++ +S P+I+R+ D ++ C+ +V+E GG L S I
Sbjct: 62 LKMLQDCPKARREVELHWRAS-QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRI 120
Query: 58 RLHG--RVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGL 115
+ G E+ A + ++ +G ++ L+S +I HRD+KPEN+L + + +LK+ DFG
Sbjct: 121 QDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF 180
Query: 116 SCTLYPGNYAEKVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQ 175
+ N C +P Y+APEVL ++YD+ DMWS+G I++ LL GYPPF N+
Sbjct: 181 AKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS-NHGL 239
Query: 176 LIVPAL------------HPDC------VDMCLK-LLSANTVDRLSFNEFYHHRFLRRNS 216
I P + +P+ V M ++ LL R++ EF +H ++ +++
Sbjct: 240 AISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 299
Query: 217 AILRAPFH 224
+ + P H
Sbjct: 300 KVPQTPLH 307
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 123 bits (308), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 131/248 (52%), Gaps = 27/248 (10%)
Query: 2 LKKLNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQ----AENCIFLVVEFCAGGNLSSYI 57
LK L K+ + EL++ +S P+I+R+ D ++ C+ +V+E GG L S I
Sbjct: 98 LKMLQDCPKARREVELHWRAS-QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRI 156
Query: 58 RLHG--RVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGL 115
+ G E+ A + ++ +G ++ L+S +I HRD+KPEN+L + + +LK+ DFG
Sbjct: 157 QDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF 216
Query: 116 SCTLYPGNYAEKVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQ 175
+ N C +P Y+APEVL ++YD+ DMWS+G I++ LL GYPPF N+
Sbjct: 217 AKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS-NHGL 275
Query: 176 LIVPAL------------HPDC------VDMCLK-LLSANTVDRLSFNEFYHHRFLRRNS 216
I P + +P+ V M ++ LL R++ EF +H ++ +++
Sbjct: 276 AISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 335
Query: 217 AILRAPFH 224
+ + P H
Sbjct: 336 KVPQTPLH 343
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 122 bits (307), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 131/248 (52%), Gaps = 27/248 (10%)
Query: 2 LKKLNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQ----AENCIFLVVEFCAGGNLSSYI 57
LK L K+ + EL++ +S P+I+R+ D ++ C+ +V+E GG L S I
Sbjct: 92 LKMLQDCPKARREVELHWRAS-QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRI 150
Query: 58 RLHG--RVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGL 115
+ G E+ A + ++ +G ++ L+S +I HRD+KPEN+L + + +LK+ DFG
Sbjct: 151 QDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF 210
Query: 116 SCTLYPGNYAEKVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQ 175
+ N C +P Y+APEVL ++YD+ DMWS+G I++ LL GYPPF N+
Sbjct: 211 AKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS-NHGL 269
Query: 176 LIVPAL------------HPDC------VDMCLK-LLSANTVDRLSFNEFYHHRFLRRNS 216
I P + +P+ V M ++ LL R++ EF +H ++ +++
Sbjct: 270 AISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 329
Query: 217 AILRAPFH 224
+ + P H
Sbjct: 330 KVPQTPLH 337
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 122 bits (307), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 109/215 (50%), Gaps = 19/215 (8%)
Query: 15 CELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQ 74
E N L V HP I+ L AFQ ++L++E+ +GG L + G E TA +L +
Sbjct: 70 AERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAE 129
Query: 75 LGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGL-SCTLYPGNYAEKVCGSPL 133
+ L L+ II+RDLKPENI+ L+ +K+ DFGL +++ G CG+
Sbjct: 130 ISMALGHLHQKGIIYRDLKPENIM---LNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIE 186
Query: 134 YMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI----------VPALHP 183
YMAPE+L ++ VD WS+GA+++++L G PPF+G N + I P L
Sbjct: 187 YMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQ 246
Query: 184 DCVDMCLKLLSANTVDRLS-----FNEFYHHRFLR 213
+ D+ KLL N RL E H F R
Sbjct: 247 EARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFR 281
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 122 bits (307), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 109/215 (50%), Gaps = 19/215 (8%)
Query: 15 CELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQ 74
E N L V HP I+ L AFQ ++L++E+ +GG L + G E TA +L +
Sbjct: 70 AERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAE 129
Query: 75 LGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGL-SCTLYPGNYAEKVCGSPL 133
+ L L+ II+RDLKPENI+ L+ +K+ DFGL +++ G CG+
Sbjct: 130 ISMALGHLHQKGIIYRDLKPENIM---LNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIE 186
Query: 134 YMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI----------VPALHP 183
YMAPE+L ++ VD WS+GA+++++L G PPF+G N + I P L
Sbjct: 187 YMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQ 246
Query: 184 DCVDMCLKLLSANTVDRLS-----FNEFYHHRFLR 213
+ D+ KLL N RL E H F R
Sbjct: 247 EARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFR 281
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 122 bits (307), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 120/216 (55%), Gaps = 19/216 (8%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRV---PEQTARKFL 72
E+ + HP+I+ L++ F+ N ++LV+E C G ++ Y++ RV E AR F+
Sbjct: 61 EVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLK--NRVKPFSENEARHFM 118
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL-YPGNYAEKVCGS 131
Q+ G+ L+SH I+HRDL N+LL+ ++ +KIADFGL+ L P +CG+
Sbjct: 119 HQIITGMLYLHSHGILHRDLTLSNLLLT---RNMNIKIADFGLATQLKMPHEKHYTLCGT 175
Query: 132 PLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPF---SGRNNVQLIVPA-------L 181
P Y++PE+ + + D+WS+G + + LL G PPF + +N + +V A L
Sbjct: 176 PNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFL 235
Query: 182 HPDCVDMCLKLLSANTVDRLSFNEFYHHRFLRRNSA 217
+ D+ +LL N DRLS + H F+ RNS+
Sbjct: 236 SIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRNSS 271
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 122 bits (306), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 112/215 (52%), Gaps = 14/215 (6%)
Query: 13 LDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL 72
L E+ S + HPNI+RL+ F ++L++E+ G + ++ R EQ ++
Sbjct: 59 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYI 118
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSP 132
+L L +S +IHRD+KPEN+LL + LKIADFG S P + +CG+
Sbjct: 119 TELANALSYCHSKRVIHRDIKPENLLLGSNGE---LKIADFGWSVHA-PSSRRTTLCGTL 174
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI-----VPALHPDCV- 186
Y+ PE+++ + +DEKVD+WS+G + +E L G PPF + V PD V
Sbjct: 175 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVT 234
Query: 187 ----DMCLKLLSANTVDRLSFNEFYHHRFLRRNSA 217
D+ +LL N RL+ E H +++ NS+
Sbjct: 235 EGARDLISRLLKHNASQRLTLAEVLEHPWIKANSS 269
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 120 bits (301), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 99/177 (55%), Gaps = 1/177 (0%)
Query: 2 LKKLNKHL-KSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH 60
LK L K + K + E+ L ++HPNII+L + F+ I LV+E GG L I
Sbjct: 83 LKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEK 142
Query: 61 GRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLY 120
G E+ A ++Q+ + L+ + I+HRDLKPEN+L + D LKIADFGLS +
Sbjct: 143 GYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVE 202
Query: 121 PGNYAEKVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI 177
+ VCG+P Y APE+L+ Y +VDMWSVG I + LL G+ PF Q +
Sbjct: 203 HQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFM 259
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 119 bits (299), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 121/235 (51%), Gaps = 22/235 (9%)
Query: 1 MLKKLNKHLKSC----LDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSY 56
++K +NK ++ E+ L S++HPNII++F+ F+ + +++V+E C GG L
Sbjct: 51 VIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLER 110
Query: 57 I---RLHGR-VPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIAD 112
I + G+ + E + ++Q+ L +S H++H+DLKPENIL +KI D
Sbjct: 111 IVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIID 170
Query: 113 FGLSCTLYPGNYAEKVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRN 172
FGL+ ++ G+ LYMAPEV + + K D+WS G +++ LL G PF+G +
Sbjct: 171 FGLAELFKSDEHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTS 229
Query: 173 -------------NVQLIVPALHPDCVDMCLKLLSANTVDRLSFNEFYHHRFLRR 214
N + L P VD+ ++L+ + R S + HH + ++
Sbjct: 230 LEEVQQKATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQ 284
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 119 bits (299), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 118/231 (51%), Gaps = 20/231 (8%)
Query: 3 KKLNKHLKSCLD---CELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRL 59
KK+ K+ +D E+ + S++HPNIIRL++ F+ I+LV+E C GG L + +
Sbjct: 40 KKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERV-V 98
Query: 60 HGRV-PEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCT 118
H RV E A + ++ + + + + ++ HRDLKPEN L D LK+ DFGL+
Sbjct: 99 HKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAAR 158
Query: 119 LYPGNYAEKVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV 178
PG G+P Y++P+VL+ Y + D WS G +++ LL GYPPFS + ++++
Sbjct: 159 FKPGKMMRTKVGTPYYVSPQVLE-GLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVML 217
Query: 179 PA--------------LHPDCVDMCLKLLSANTVDRLSFNEFYHHRFLRRN 215
+ P + +LL+ + R++ + H + +
Sbjct: 218 KIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQ 268
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 119 bits (298), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 118/231 (51%), Gaps = 20/231 (8%)
Query: 3 KKLNKHLKSCLD---CELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRL 59
KK+ K+ +D E+ + S++HPNIIRL++ F+ I+LV+E C GG L + +
Sbjct: 57 KKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERV-V 115
Query: 60 HGRV-PEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCT 118
H RV E A + ++ + + + + ++ HRDLKPEN L D LK+ DFGL+
Sbjct: 116 HKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAAR 175
Query: 119 LYPGNYAEKVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV 178
PG G+P Y++P+VL+ Y + D WS G +++ LL GYPPFS + ++++
Sbjct: 176 FKPGKMMRTKVGTPYYVSPQVLE-GLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVML 234
Query: 179 PA--------------LHPDCVDMCLKLLSANTVDRLSFNEFYHHRFLRRN 215
+ P + +LL+ + R++ + H + +
Sbjct: 235 KIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQ 285
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 119 bits (298), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 119/221 (53%), Gaps = 19/221 (8%)
Query: 10 KSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
+ ++ E+N L + HPNII L D F+ + + L++E +GG L ++ + E A
Sbjct: 52 REEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEAT 111
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDV---MLKIADFGLSCTLYPGNYAE 126
+FL+Q+ G+ L+S I H DLKPENI+L LD +V +K+ DFG++ + GN +
Sbjct: 112 QFLKQILDGVHYLHSKRIAHFDLKPENIML--LDKNVPNPRIKLIDFGIAHKIEAGNEFK 169
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI--VPALHPD 184
+ G+P ++APE++ ++ + DMWS+G I + LL+G PF G + + + A++ D
Sbjct: 170 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYD 229
Query: 185 ------------CVDMCLKLLSANTVDRLSFNEFYHHRFLR 213
D +LL + R++ + H +++
Sbjct: 230 FDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIK 270
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 119 bits (298), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 98/165 (59%), Gaps = 4/165 (2%)
Query: 15 CELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQ 74
E + L+ VNHP +++L AFQ E ++L+++F GG+L + + E+ + +L +
Sbjct: 79 MERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAE 138
Query: 75 LGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSC-TLYPGNYAEKVCGSPL 133
L GL+ L+S II+RDLKPENIL LD++ +K+ DFGLS + A CG+
Sbjct: 139 LALGLDHLHSLGIIYRDLKPENIL---LDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVE 195
Query: 134 YMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV 178
YMAPEV+ Q + D WS G ++FE+L G PF G++ + +
Sbjct: 196 YMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMT 240
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 118 bits (296), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 101/172 (58%), Gaps = 5/172 (2%)
Query: 10 KSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
+ ++ E+N L + HPNII L D F+ + + L++E +GG L ++ + E A
Sbjct: 59 REEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEAT 118
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDV---MLKIADFGLSCTLYPGNYAE 126
+FL+Q+ G+ L+S I H DLKPENI+L LD +V +K+ DFG++ + GN +
Sbjct: 119 QFLKQILDGVHYLHSKRIAHFDLKPENIML--LDKNVPNPRIKLIDFGIAHKIEAGNEFK 176
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV 178
+ G+P ++APE++ ++ + DMWS+G I + LL+G PF G + +
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLT 228
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 118 bits (296), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 101/172 (58%), Gaps = 5/172 (2%)
Query: 10 KSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
+ ++ E+N L + HPNII L D F+ + + L++E +GG L ++ + E A
Sbjct: 73 REEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEAT 132
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDV---MLKIADFGLSCTLYPGNYAE 126
+FL+Q+ G+ L+S I H DLKPENI+L LD +V +K+ DFG++ + GN +
Sbjct: 133 QFLKQILDGVHYLHSKRIAHFDLKPENIML--LDKNVPNPRIKLIDFGIAHKIEAGNEFK 190
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV 178
+ G+P ++APE++ ++ + DMWS+G I + LL+G PF G + +
Sbjct: 191 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLT 242
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 118 bits (296), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 110/199 (55%), Gaps = 14/199 (7%)
Query: 15 CELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQ 74
E + L VNHP I++L AFQ E ++L+++F GG+L + + E+ + +L +
Sbjct: 75 MERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAE 134
Query: 75 LGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSC-TLYPGNYAEKVCGSPL 133
L L+ L+S II+RDLKPENIL LD++ +K+ DFGLS ++ A CG+
Sbjct: 135 LALALDHLHSLGIIYRDLKPENIL---LDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVE 191
Query: 134 YMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRN---NVQLIVPA-------LHP 183
YMAPEV+ + + + D WS G ++FE+L G PF G++ + +I+ A L P
Sbjct: 192 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSP 251
Query: 184 DCVDMCLKLLSANTVDRLS 202
+ + L N +RL
Sbjct: 252 EAQSLLRMLFKRNPANRLG 270
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 118 bits (296), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 110/199 (55%), Gaps = 14/199 (7%)
Query: 15 CELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQ 74
E + L VNHP I++L AFQ E ++L+++F GG+L + + E+ + +L +
Sbjct: 76 MERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAE 135
Query: 75 LGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSC-TLYPGNYAEKVCGSPL 133
L L+ L+S II+RDLKPENIL LD++ +K+ DFGLS ++ A CG+
Sbjct: 136 LALALDHLHSLGIIYRDLKPENIL---LDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVE 192
Query: 134 YMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRN---NVQLIVPA-------LHP 183
YMAPEV+ + + + D WS G ++FE+L G PF G++ + +I+ A L P
Sbjct: 193 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSP 252
Query: 184 DCVDMCLKLLSANTVDRLS 202
+ + L N +RL
Sbjct: 253 EAQSLLRMLFKRNPANRLG 271
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 117 bits (294), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 110/199 (55%), Gaps = 14/199 (7%)
Query: 15 CELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQ 74
E + L VNHP I++L AFQ E ++L+++F GG+L + + E+ + +L +
Sbjct: 75 MERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAE 134
Query: 75 LGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSC-TLYPGNYAEKVCGSPL 133
L L+ L+S II+RDLKPENIL LD++ +K+ DFGLS ++ A CG+
Sbjct: 135 LALALDHLHSLGIIYRDLKPENIL---LDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVE 191
Query: 134 YMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRN---NVQLIVPA-------LHP 183
YMAPEV+ + + + D WS G ++FE+L G PF G++ + +I+ A L P
Sbjct: 192 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSP 251
Query: 184 DCVDMCLKLLSANTVDRLS 202
+ + L N +RL
Sbjct: 252 EAQSLLRMLFKRNPANRLG 270
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 117 bits (294), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 110/216 (50%), Gaps = 16/216 (7%)
Query: 13 LDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL 72
L E+ S + HPNI+RL+ F ++L++E+ G + ++ + EQ ++
Sbjct: 60 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYI 119
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSP 132
+L L +S +IHRD+KPEN+LL + LKIADFG S P + +CG+
Sbjct: 120 TELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVHA-PSSRRTTLCGTL 175
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI------VPALHPDCV 186
Y+ PE+++ + +DEKVD+WS+G + +E L G PPF N Q V PD V
Sbjct: 176 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVEFTFPDFV 234
Query: 187 -----DMCLKLLSANTVDRLSFNEFYHHRFLRRNSA 217
D+ +LL N R E H ++ NS+
Sbjct: 235 TEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 270
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 117 bits (293), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 110/215 (51%), Gaps = 14/215 (6%)
Query: 13 LDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL 72
L E+ S + HPNI+RL+ F ++L++E+ G + ++ + EQ ++
Sbjct: 58 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 117
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSP 132
+L L +S +IHRD+KPEN+LL + LKIADFG S P + + +CG+
Sbjct: 118 TELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVHA-PSSRRDDLCGTL 173
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI-----VPALHPDCV- 186
Y+ PE+++ + +DEKVD+WS+G + +E L G PPF + V PD V
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT 233
Query: 187 ----DMCLKLLSANTVDRLSFNEFYHHRFLRRNSA 217
D+ +LL N R E H ++ NS+
Sbjct: 234 EGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 268
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 117 bits (293), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 110/215 (51%), Gaps = 14/215 (6%)
Query: 13 LDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL 72
L E+ S + HPNI+RL+ F ++L++E+ G + ++ + EQ ++
Sbjct: 56 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 115
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSP 132
+L L +S +IHRD+KPEN+LL + LKIADFG S P + + +CG+
Sbjct: 116 TELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVHA-PSSRRDTLCGTL 171
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI-----VPALHPDCV- 186
Y+ PE+++ + +DEKVD+WS+G + +E L G PPF + V PD V
Sbjct: 172 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT 231
Query: 187 ----DMCLKLLSANTVDRLSFNEFYHHRFLRRNSA 217
D+ +LL N R E H ++ NS+
Sbjct: 232 EGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 266
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 117 bits (292), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 111/216 (51%), Gaps = 16/216 (7%)
Query: 13 LDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL 72
L E+ S + HPNI+RL+ F ++L++E+ G + ++ + EQ ++
Sbjct: 81 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 140
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSP 132
+L L +S +IHRD+KPEN+LL + LKIADFG S P + + +CG+
Sbjct: 141 TELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVHA-PSSRRDDLCGTL 196
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI------VPALHPDCV 186
Y+ PE+++ + +DEKVD+WS+G + +E L G PPF N Q V PD V
Sbjct: 197 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVEFTFPDFV 255
Query: 187 -----DMCLKLLSANTVDRLSFNEFYHHRFLRRNSA 217
D+ +LL N R E H ++ NS+
Sbjct: 256 TEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 291
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 117 bits (292), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 77/234 (32%), Positives = 115/234 (49%), Gaps = 21/234 (8%)
Query: 3 KKLNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGR 62
KKL+ L+ E + HPNI+RL D+ E +LV + GG L I
Sbjct: 40 KKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREY 99
Query: 63 VPEQTARKFLQQLGAGLEILNSHH---IIHRDLKPENILLSGLDDDVMLKIADFGLSCTL 119
E A +QQ+ LE +N H I+HRDLKPEN+LL+ +K+ADFGL+ +
Sbjct: 100 YSEADASHCIQQI---LESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEV 156
Query: 120 YPGNYAE-KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV 178
A G+P Y++PEVL+ Y + VDMW+ G IL+ LL GYPPF + +L
Sbjct: 157 QGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQ 216
Query: 179 P--------------ALHPDCVDMCLKLLSANTVDRLSFNEFYHHRFLRRNSAI 218
+ P+ D+ K+L+ N R++ +E H ++ + S +
Sbjct: 217 QIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPWICQRSTV 270
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 117 bits (292), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 97/175 (55%), Gaps = 1/175 (0%)
Query: 2 LKKLNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHG 61
+KK S L+ E+ L + H NI+ L D +++ +LV++ +GG L I G
Sbjct: 42 IKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERG 101
Query: 62 RVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYP 121
E+ A +QQ+ + ++ L+ + I+HRDLKPEN+L +++ + I DFGLS +
Sbjct: 102 VYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLS-KMEQ 160
Query: 122 GNYAEKVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL 176
CG+P Y+APEVL + Y + VD WS+G I + LL GYPPF +L
Sbjct: 161 NGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKL 215
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 117 bits (292), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 77/234 (32%), Positives = 115/234 (49%), Gaps = 21/234 (8%)
Query: 3 KKLNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGR 62
KKL+ L+ E + HPNI+RL D+ E +LV + GG L I
Sbjct: 40 KKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREY 99
Query: 63 VPEQTARKFLQQLGAGLEILNSHH---IIHRDLKPENILLSGLDDDVMLKIADFGLSCTL 119
E A +QQ+ LE +N H I+HRDLKPEN+LL+ +K+ADFGL+ +
Sbjct: 100 YSEADASHCIQQI---LESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEV 156
Query: 120 YPGNYAE-KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI- 177
A G+P Y++PEVL+ Y + VDMW+ G IL+ LL GYPPF + +L
Sbjct: 157 QGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQ 216
Query: 178 -------------VPALHPDCVDMCLKLLSANTVDRLSFNEFYHHRFLRRNSAI 218
+ P+ D+ K+L+ N R++ +E H ++ + S +
Sbjct: 217 QIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPWICQRSTV 270
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 117 bits (292), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 109/215 (50%), Gaps = 14/215 (6%)
Query: 13 LDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL 72
L E+ S + HPNI+RL+ F ++L++E+ G + ++ + EQ ++
Sbjct: 58 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 117
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSP 132
+L L +S +IHRD+KPEN+LL + LKIADFG S P + +CG+
Sbjct: 118 TELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVHA-PSSRRTTLCGTL 173
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI-----VPALHPDCV- 186
Y+ PE+++ + +DEKVD+WS+G + +E L G PPF + V PD V
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT 233
Query: 187 ----DMCLKLLSANTVDRLSFNEFYHHRFLRRNSA 217
D+ +LL N R E H ++ NS+
Sbjct: 234 EGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 268
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 117 bits (292), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 109/215 (50%), Gaps = 14/215 (6%)
Query: 13 LDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL 72
L E+ S + HPNI+RL+ F ++L++E+ G + ++ + EQ ++
Sbjct: 54 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 113
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSP 132
+L L +S +IHRD+KPEN+LL + LKIADFG S P + +CG+
Sbjct: 114 TELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVHA-PSSRRTTLCGTL 169
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI-----VPALHPDCV- 186
Y+ PE+++ + +DEKVD+WS+G + +E L G PPF + V PD V
Sbjct: 170 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT 229
Query: 187 ----DMCLKLLSANTVDRLSFNEFYHHRFLRRNSA 217
D+ +LL N R E H ++ NS+
Sbjct: 230 EGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 264
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 117 bits (292), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 110/215 (51%), Gaps = 14/215 (6%)
Query: 13 LDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL 72
L E+ S + HPNI+RL+ F ++L++E+ G + ++ + EQ ++
Sbjct: 55 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 114
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSP 132
+L L +S +IHRD+KPEN+LL + LKIADFG S P + ++CG+
Sbjct: 115 TELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVHA-PSSRRTELCGTL 170
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI-----VPALHPDCV- 186
Y+ PE+++ + +DEKVD+WS+G + +E L G PPF + V PD V
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT 230
Query: 187 ----DMCLKLLSANTVDRLSFNEFYHHRFLRRNSA 217
D+ +LL N R E H ++ NS+
Sbjct: 231 EGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 265
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 116 bits (291), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 109/215 (50%), Gaps = 14/215 (6%)
Query: 13 LDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL 72
L E+ S + HPNI+RL+ F ++L++E+ G + ++ + EQ ++
Sbjct: 58 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 117
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSP 132
+L L +S +IHRD+KPEN+LL + LKIADFG S P + +CG+
Sbjct: 118 TELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVHA-PSSRRTTLCGTL 173
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI-----VPALHPDCV- 186
Y+ PE+++ + +DEKVD+WS+G + +E L G PPF + V PD V
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT 233
Query: 187 ----DMCLKLLSANTVDRLSFNEFYHHRFLRRNSA 217
D+ +LL N R E H ++ NS+
Sbjct: 234 EGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 268
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 116 bits (291), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 110/216 (50%), Gaps = 16/216 (7%)
Query: 13 LDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL 72
L E+ S + HPNI+RL+ F ++L++E+ G + ++ + EQ ++
Sbjct: 56 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 115
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSP 132
+L L +S +IHRD+KPEN+LL + LKIADFG SC P + + G+
Sbjct: 116 TELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSCHA-PSSRRTTLSGTL 171
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI------VPALHPDCV 186
Y+ PE+++ + +DEKVD+WS+G + +E L G PPF N Q V PD V
Sbjct: 172 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVEFTFPDFV 230
Query: 187 -----DMCLKLLSANTVDRLSFNEFYHHRFLRRNSA 217
D+ +LL N R E H ++ NS+
Sbjct: 231 TEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 266
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 116 bits (291), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 109/215 (50%), Gaps = 14/215 (6%)
Query: 13 LDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL 72
L E+ S + HPNI+RL+ F ++L++E+ G + ++ + EQ ++
Sbjct: 52 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 111
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSP 132
+L L +S +IHRD+KPEN+LL + LKIADFG S P + +CG+
Sbjct: 112 TELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVHA-PSSRRTTLCGTL 167
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI-----VPALHPDCV- 186
Y+ PE+++ + +DEKVD+WS+G + +E L G PPF + V PD V
Sbjct: 168 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT 227
Query: 187 ----DMCLKLLSANTVDRLSFNEFYHHRFLRRNSA 217
D+ +LL N R E H ++ NS+
Sbjct: 228 EGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 262
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 116 bits (291), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 109/215 (50%), Gaps = 14/215 (6%)
Query: 13 LDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL 72
L E+ S + HPNI+RL+ F ++L++E+ G + ++ + EQ ++
Sbjct: 59 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 118
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSP 132
+L L +S +IHRD+KPEN+LL + LKIADFG S P + +CG+
Sbjct: 119 TELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVHA-PSSRRTTLCGTL 174
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI-----VPALHPDCV- 186
Y+ PE+++ + +DEKVD+WS+G + +E L G PPF + V PD V
Sbjct: 175 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT 234
Query: 187 ----DMCLKLLSANTVDRLSFNEFYHHRFLRRNSA 217
D+ +LL N R E H ++ NS+
Sbjct: 235 EGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 269
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 116 bits (291), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 110/216 (50%), Gaps = 16/216 (7%)
Query: 13 LDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL 72
L E+ S + HPNI+RL+ F ++L++E+ G + ++ + EQ ++
Sbjct: 60 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 119
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSP 132
+L L +S +IHRD+KPEN+LL + LKIADFG S P + +CG+
Sbjct: 120 TELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVHA-PSSRRTTLCGTL 175
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI------VPALHPDCV 186
Y+ PE+++ + +DEKVD+WS+G + +E L G PPF N Q V PD V
Sbjct: 176 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVEFTFPDFV 234
Query: 187 -----DMCLKLLSANTVDRLSFNEFYHHRFLRRNSA 217
D+ +LL N R E H ++ NS+
Sbjct: 235 TEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 270
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 116 bits (291), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 109/215 (50%), Gaps = 14/215 (6%)
Query: 13 LDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL 72
L E+ S + HPNI+RL+ F ++L++E+ G + ++ + EQ ++
Sbjct: 58 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 117
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSP 132
+L L +S +IHRD+KPEN+LL + LKIADFG S P + +CG+
Sbjct: 118 TELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVHA-PSSRRXXLCGTL 173
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI-----VPALHPDCV- 186
Y+ PE+++ + +DEKVD+WS+G + +E L G PPF + V PD V
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT 233
Query: 187 ----DMCLKLLSANTVDRLSFNEFYHHRFLRRNSA 217
D+ +LL N R E H ++ NS+
Sbjct: 234 EGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 268
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 116 bits (291), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 109/215 (50%), Gaps = 14/215 (6%)
Query: 13 LDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL 72
L E+ S + HPNI+RL+ F ++L++E+ G + ++ + EQ ++
Sbjct: 55 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 114
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSP 132
+L L +S +IHRD+KPEN+LL + LKIADFG S P + +CG+
Sbjct: 115 TELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVHA-PSSRRTXLCGTL 170
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI-----VPALHPDCV- 186
Y+ PE+++ + +DEKVD+WS+G + +E L G PPF + V PD V
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT 230
Query: 187 ----DMCLKLLSANTVDRLSFNEFYHHRFLRRNSA 217
D+ +LL N R E H ++ NS+
Sbjct: 231 EGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 265
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 116 bits (291), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 109/216 (50%), Gaps = 16/216 (7%)
Query: 13 LDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL 72
L E+ S + HPNI+RL+ F ++L++E+ G + ++ + EQ ++
Sbjct: 60 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 119
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSP 132
+L L +S +IHRD+KPEN+LL + LKIADFG S P + +CG+
Sbjct: 120 TELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVHA-PSSRRTTLCGTL 175
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI------VPALHPDCV 186
Y+ PE ++ + +DEKVD+WS+G + +E L G PPF N Q V PD V
Sbjct: 176 DYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVEFTFPDFV 234
Query: 187 -----DMCLKLLSANTVDRLSFNEFYHHRFLRRNSA 217
D+ +LL N R E H ++ NS+
Sbjct: 235 TEGARDLISRLLKHNPSQRPXLREVLEHPWITANSS 270
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 109/215 (50%), Gaps = 14/215 (6%)
Query: 13 LDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL 72
L E+ S + HPNI+RL+ F ++L++E+ G + ++ + EQ ++
Sbjct: 55 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 114
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSP 132
+L L +S +IHRD+KPEN+LL + LKIADFG S P + +CG+
Sbjct: 115 TELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVHA-PSSRRXXLCGTL 170
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI-----VPALHPDCV- 186
Y+ PE+++ + +DEKVD+WS+G + +E L G PPF + V PD V
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT 230
Query: 187 ----DMCLKLLSANTVDRLSFNEFYHHRFLRRNSA 217
D+ +LL N R E H ++ NS+
Sbjct: 231 EGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 265
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 109/215 (50%), Gaps = 14/215 (6%)
Query: 13 LDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL 72
L E+ S + HPNI+RL+ F ++L++E+ G + ++ + EQ ++
Sbjct: 60 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 119
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSP 132
+L L +S +IHRD+KPEN+LL + LKIADFG S P + +CG+
Sbjct: 120 TELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVHA-PSSRRTDLCGTL 175
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI-----VPALHPDCV- 186
Y+ PE+++ + +DEKVD+WS+G + +E L G PPF + V PD V
Sbjct: 176 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT 235
Query: 187 ----DMCLKLLSANTVDRLSFNEFYHHRFLRRNSA 217
D+ +LL N R E H ++ NS+
Sbjct: 236 EGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 270
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 109/215 (50%), Gaps = 14/215 (6%)
Query: 13 LDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL 72
L E+ S + HPNI+RL+ F ++L++E+ G + ++ + EQ ++
Sbjct: 55 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 114
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSP 132
+L L +S +IHRD+KPEN+LL + LKIADFG S P + +CG+
Sbjct: 115 TELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVHA-PSSRRTTLCGTL 170
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI-----VPALHPDCV- 186
Y+ PE+++ + +DEKVD+WS+G + +E L G PPF + V PD V
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT 230
Query: 187 ----DMCLKLLSANTVDRLSFNEFYHHRFLRRNSA 217
D+ +LL N R E H ++ NS+
Sbjct: 231 EGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 265
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 109/215 (50%), Gaps = 14/215 (6%)
Query: 13 LDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL 72
L E+ S + HPNI+RL+ F ++L++E+ G + ++ + EQ ++
Sbjct: 55 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 114
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSP 132
+L L +S +IHRD+KPEN+LL + LKIADFG S P + +CG+
Sbjct: 115 TELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVHA-PSSRRTDLCGTL 170
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI-----VPALHPDCV- 186
Y+ PE+++ + +DEKVD+WS+G + +E L G PPF + V PD V
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT 230
Query: 187 ----DMCLKLLSANTVDRLSFNEFYHHRFLRRNSA 217
D+ +LL N R E H ++ NS+
Sbjct: 231 EGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 265
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 109/215 (50%), Gaps = 14/215 (6%)
Query: 13 LDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL 72
L E+ S + HPNI+RL+ F ++L++E+ G + ++ + EQ ++
Sbjct: 55 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 114
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSP 132
+L L +S +IHRD+KPEN+LL + LKIADFG S P + +CG+
Sbjct: 115 TELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVHA-PSSRRAALCGTL 170
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI-----VPALHPDCV- 186
Y+ PE+++ + +DEKVD+WS+G + +E L G PPF + V PD V
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT 230
Query: 187 ----DMCLKLLSANTVDRLSFNEFYHHRFLRRNSA 217
D+ +LL N R E H ++ NS+
Sbjct: 231 EGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 265
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 116 bits (290), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 109/215 (50%), Gaps = 14/215 (6%)
Query: 13 LDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL 72
L E+ S + HPNI+RL+ F ++L++E+ G + ++ + EQ ++
Sbjct: 57 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 116
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSP 132
+L L +S +IHRD+KPEN+LL + LKIADFG S P + +CG+
Sbjct: 117 TELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVHA-PSSRRXXLCGTL 172
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI-----VPALHPDCV- 186
Y+ PE+++ + +DEKVD+WS+G + +E L G PPF + V PD V
Sbjct: 173 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT 232
Query: 187 ----DMCLKLLSANTVDRLSFNEFYHHRFLRRNSA 217
D+ +LL N R E H ++ NS+
Sbjct: 233 EGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 267
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 116 bits (290), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 112/215 (52%), Gaps = 14/215 (6%)
Query: 13 LDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL 72
L E+ S + HPNI+RL+ F ++L++E+ G + ++ + EQ ++
Sbjct: 55 LRREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 114
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSP 132
+L L +S +IHRD+KPEN+LL + LKIADFG S P + +CG+
Sbjct: 115 TELANALSYCHSKKVIHRDIKPENLLLGSAGE---LKIADFGWSVHA-PSSRRAALCGTL 170
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSG---RNNVQLI--VPALHPDCV- 186
Y+ PE+++ + +DEKVD+WS+G + +E L G PPF ++ + I V PD V
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPDFVT 230
Query: 187 ----DMCLKLLSANTVDRLSFNEFYHHRFLRRNSA 217
D+ +LL N R E H ++ NS+
Sbjct: 231 EGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 265
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 116 bits (290), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 109/215 (50%), Gaps = 14/215 (6%)
Query: 13 LDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL 72
L E+ S + HPNI+RL+ F ++L++E+ G + ++ + EQ ++
Sbjct: 55 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 114
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSP 132
+L L +S +IHRD+KPEN+LL + LKIADFG S P + +CG+
Sbjct: 115 TELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVHA-PSSRRTDLCGTL 170
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI-----VPALHPDCV- 186
Y+ PE+++ + +DEKVD+WS+G + +E L G PPF + V PD V
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT 230
Query: 187 ----DMCLKLLSANTVDRLSFNEFYHHRFLRRNSA 217
D+ +LL N R E H ++ NS+
Sbjct: 231 EGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 265
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 116 bits (290), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 109/215 (50%), Gaps = 14/215 (6%)
Query: 13 LDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL 72
L E+ S + HPNI+RL+ F ++L++E+ G + ++ + EQ ++
Sbjct: 56 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 115
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSP 132
+L L +S +IHRD+KPEN+LL + LKIADFG S P + +CG+
Sbjct: 116 TELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVHA-PSSRRTDLCGTL 171
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI-----VPALHPDCV- 186
Y+ PE+++ + +DEKVD+WS+G + +E L G PPF + V PD V
Sbjct: 172 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT 231
Query: 187 ----DMCLKLLSANTVDRLSFNEFYHHRFLRRNSA 217
D+ +LL N R E H ++ NS+
Sbjct: 232 EGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 266
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 116 bits (290), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 110/216 (50%), Gaps = 16/216 (7%)
Query: 13 LDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL 72
L E+ S + HPNI+RL+ F ++L++E+ G + ++ + EQ ++
Sbjct: 72 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 131
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSP 132
+L L +S +IHRD+KPEN+LL + LKIADFG S P + +CG+
Sbjct: 132 TELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVHA-PSSRRTTLCGTL 187
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI------VPALHPDCV 186
Y+ PE+++ + +DEKVD+WS+G + +E L G PPF N Q V PD V
Sbjct: 188 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVEFTFPDFV 246
Query: 187 -----DMCLKLLSANTVDRLSFNEFYHHRFLRRNSA 217
D+ +LL N R E H ++ NS+
Sbjct: 247 TEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 282
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 116 bits (290), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 110/216 (50%), Gaps = 16/216 (7%)
Query: 13 LDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL 72
L E+ S + HPNI+RL+ F ++L++E+ G + ++ + EQ ++
Sbjct: 81 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 140
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSP 132
+L L +S +IHRD+KPEN+LL + LKIADFG S P + +CG+
Sbjct: 141 TELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVHA-PSSRRTTLCGTL 196
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI------VPALHPDCV 186
Y+ PE+++ + +DEKVD+WS+G + +E L G PPF N Q V PD V
Sbjct: 197 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVEFTFPDFV 255
Query: 187 -----DMCLKLLSANTVDRLSFNEFYHHRFLRRNSA 217
D+ +LL N R E H ++ NS+
Sbjct: 256 TEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 291
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 116 bits (290), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 109/215 (50%), Gaps = 14/215 (6%)
Query: 13 LDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL 72
L E+ S + HPNI+RL+ F ++L++E+ G + ++ + EQ ++
Sbjct: 58 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 117
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSP 132
+L L +S +IHRD+KPEN+LL + LKIADFG S P + +CG+
Sbjct: 118 TELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVHA-PSSRRAALCGTL 173
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI-----VPALHPDCV- 186
Y+ PE+++ + +DEKVD+WS+G + +E L G PPF + V PD V
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT 233
Query: 187 ----DMCLKLLSANTVDRLSFNEFYHHRFLRRNSA 217
D+ +LL N R E H ++ NS+
Sbjct: 234 EGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 268
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 116 bits (290), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 126/241 (52%), Gaps = 28/241 (11%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQ 66
K ++ L+ E L +VN P +++L +F+ + +++V+E+ AGG + S++R GR E
Sbjct: 104 KQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP 162
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
AR + Q+ E L+S +I+RDLKPEN+L +D +++ DFG + + +
Sbjct: 163 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGATWT- 218
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL---IVPA--- 180
+CG+P Y+APE++ + Y++ VD W++G +++E+ GYPPF +Q+ IV
Sbjct: 219 -LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 277
Query: 181 ----LHPDCVDMCLKLLSANTVDRL-----SFNEFYHHRFLRRNSAI------LRAPFHI 225
D D+ LL + R N+ +H++ I + APF I
Sbjct: 278 FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF-I 336
Query: 226 P 226
P
Sbjct: 337 P 337
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 115 bits (288), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 125/238 (52%), Gaps = 27/238 (11%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQ 66
K ++ L+ E L +VN P +++L +F+ + +++V+E+ GG++ S++R GR E
Sbjct: 83 KQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEP 141
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
AR + Q+ E L+S +I+RDLKPEN+L +D +K+ADFG + + +
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLL---IDQQGYIKVADFGFAKRVKGRTWX- 197
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL---IVPA--- 180
+CG+P Y+APE++ + Y++ VD W++G +++E+ GYPPF +Q+ IV
Sbjct: 198 -LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
Query: 181 ----LHPDCVDMCLKLLSANTVDRL-----SFNEFYHHRFLRRNSAI------LRAPF 223
D D+ LL + R N+ +H++ I + APF
Sbjct: 257 FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 115 bits (288), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 125/238 (52%), Gaps = 27/238 (11%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQ 66
K ++ L+ E L +VN P +++L +F+ + +++V+E+ GG++ S++R GR E
Sbjct: 83 KQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEP 141
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
AR + Q+ E L+S +I+RDLKPEN+L +D +K+ADFG + + +
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLL---IDQQGYIKVADFGFAKRVKGRTWX- 197
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL---IVPA--- 180
+CG+P Y+APE++ + Y++ VD W++G +++E+ GYPPF +Q+ IV
Sbjct: 198 -LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
Query: 181 ----LHPDCVDMCLKLLSANTVDRL-----SFNEFYHHRFLRRNSAI------LRAPF 223
D D+ LL + R N+ +H++ I + APF
Sbjct: 257 FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 115 bits (287), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 125/238 (52%), Gaps = 27/238 (11%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQ 66
K ++ L+ E L +VN P +++L +F+ + +++V+E+ AGG + S++R GR E
Sbjct: 70 KQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP 128
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
AR + Q+ E L+S +I+RDLKPEN+L +D+ +++ DFG + + +
Sbjct: 129 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLL---IDEQGYIQVTDFGFAKRVKGRTWX- 184
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL---IVPA--- 180
+CG+P Y+APE++ + Y++ VD W++G +++E+ GYPPF +Q+ IV
Sbjct: 185 -LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 243
Query: 181 ----LHPDCVDMCLKLLSANTVDRL-----SFNEFYHHRFLRRNSAI------LRAPF 223
D D+ LL + R N+ +H++ I + APF
Sbjct: 244 FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 301
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 115 bits (287), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 124/248 (50%), Gaps = 27/248 (10%)
Query: 2 LKKLNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQ----AENCIFLVVEFCAGGNLSSYI 57
LK L K+ + EL++ +S P+I+R+ D ++ C+ +V E GG L S I
Sbjct: 92 LKXLQDCPKARREVELHWRAS-QCPHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRI 150
Query: 58 RLHG--RVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGL 115
+ G E+ A + + +G ++ L+S +I HRD+KPEN+L + + +LK+ DFG
Sbjct: 151 QDRGDQAFTEREASEIXKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF 210
Query: 116 SCTLYPGNYAEKVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQ 175
+ N C +P Y+APEVL ++YD+ D WS+G I + LL GYPPF N+
Sbjct: 211 AKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFYS-NHGL 269
Query: 176 LIVPAL------------HPDCVDMCLK-------LLSANTVDRLSFNEFYHHRFLRRNS 216
I P +P+ ++ + LL R + EF +H ++ +++
Sbjct: 270 AISPGXKTRIRXGQYEFPNPEWSEVSEEVKXLIRNLLKTEPTQRXTITEFXNHPWIXQST 329
Query: 217 AILRAPFH 224
+ + P H
Sbjct: 330 KVPQTPLH 337
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 115 bits (287), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 124/238 (52%), Gaps = 27/238 (11%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQ 66
K ++ L+ E L +VN P +++L +F+ + +++V+E+ GG + S++R GR E
Sbjct: 83 KQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP 141
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
AR + Q+ E L+S +I+RDLKPEN+L +D +K+ADFG + + +
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLL---IDQQGYIKVADFGFAKRVKGRTWX- 197
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL---IVPA--- 180
+CG+P Y+APE++ + Y++ VD W++G +++E+ GYPPF +Q+ IV
Sbjct: 198 -LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
Query: 181 ----LHPDCVDMCLKLLSANTVDRL-----SFNEFYHHRFLRRNSAI------LRAPF 223
D D+ LL + R N+ +H++ I + APF
Sbjct: 257 FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 115 bits (287), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 109/215 (50%), Gaps = 14/215 (6%)
Query: 13 LDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL 72
L E+ S + HPNI+RL+ F ++L++E+ G + ++ + EQ ++
Sbjct: 58 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 117
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSP 132
+L L +S +IHRD+KPEN+LL + LKIA+FG S P + +CG+
Sbjct: 118 TELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIANFGWSVHA-PSSRRTTLCGTL 173
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI-----VPALHPDCV- 186
Y+ PE+++ + +DEKVD+WS+G + +E L G PPF + V PD V
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT 233
Query: 187 ----DMCLKLLSANTVDRLSFNEFYHHRFLRRNSA 217
D+ +LL N R E H ++ NS+
Sbjct: 234 EGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 268
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 114 bits (286), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 110/216 (50%), Gaps = 16/216 (7%)
Query: 13 LDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL 72
L E+ S + HPNI+RL+ F ++L++E+ G + ++ + EQ ++
Sbjct: 57 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 116
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSP 132
+L L +S +IHRD+KPEN+LL + LKIA+FG S P + +CG+
Sbjct: 117 TELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIANFGWSVHA-PSSRRTTLCGTL 172
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI------VPALHPDCV 186
Y+ PE+++ + +DEKVD+WS+G + +E L G PPF N Q V PD V
Sbjct: 173 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVEFTFPDFV 231
Query: 187 -----DMCLKLLSANTVDRLSFNEFYHHRFLRRNSA 217
D+ +LL N R E H ++ NS+
Sbjct: 232 TEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 267
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 114 bits (286), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 126/241 (52%), Gaps = 28/241 (11%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQ 66
K ++ L+ E L +VN P +++L +F+ + +++V+E+ AGG + S++R GR E
Sbjct: 83 KQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEP 141
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
AR + Q+ E L+S +I+RDLKPEN+L +D +++ DFG + + +
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTWX- 197
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL---IVPA--- 180
+CG+P Y+APE++ + Y++ VD W++G +++E+ GYPPF +Q+ IV
Sbjct: 198 -LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
Query: 181 ----LHPDCVDMCLKLLSANTVDRL-----SFNEFYHHRFLRRNSAI------LRAPFHI 225
D D+ LL + R N+ +H++ I + APF I
Sbjct: 257 FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF-I 315
Query: 226 P 226
P
Sbjct: 316 P 316
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 114 bits (286), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 126/241 (52%), Gaps = 28/241 (11%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQ 66
K ++ L+ E L +VN P +++L +F+ + +++V+E+ AGG + S++R GR E
Sbjct: 83 KQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP 141
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
AR + Q+ E L+S +I+RDLKPEN+L +D +++ DFG + + +
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTWX- 197
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL---IVPA--- 180
+CG+P Y+APE++ + Y++ VD W++G +++E+ GYPPF +Q+ IV
Sbjct: 198 -LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
Query: 181 ----LHPDCVDMCLKLLSANTVDRL-----SFNEFYHHRFLRRNSAI------LRAPFHI 225
D D+ LL + R N+ +H++ I + APF I
Sbjct: 257 FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF-I 315
Query: 226 P 226
P
Sbjct: 316 P 316
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 114 bits (286), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 99/161 (61%), Gaps = 5/161 (3%)
Query: 13 LDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL 72
++ E++ L + HPN+I L + ++ + + L++E AGG L ++ + E+ A +FL
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDV---MLKIADFGLSCTLYPGNYAEKVC 129
+Q+ G+ L+S I H DLKPENI+L LD +V +KI DFGL+ + GN + +
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIML--LDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF 178
Query: 130 GSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSG 170
G+P ++APE++ ++ + DMWS+G I + LL+G PF G
Sbjct: 179 GTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 114 bits (286), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 126/241 (52%), Gaps = 28/241 (11%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQ 66
K ++ L+ E L +VN P +++L +F+ + +++V+E+ AGG + S++R GR E
Sbjct: 83 KQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP 141
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
AR + Q+ E L+S +I+RDLKPEN+L +D +++ DFG + + +
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTWX- 197
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL---IVPA--- 180
+CG+P Y+APE++ + Y++ VD W++G +++E+ GYPPF +Q+ IV
Sbjct: 198 -LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
Query: 181 ----LHPDCVDMCLKLLSANTVDRL-----SFNEFYHHRFLRRNSAI------LRAPFHI 225
D D+ LL + R N+ +H++ I + APF I
Sbjct: 257 FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF-I 315
Query: 226 P 226
P
Sbjct: 316 P 316
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 114 bits (286), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 126/241 (52%), Gaps = 28/241 (11%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQ 66
K ++ L+ E L +VN P +++L +F+ + +++V+E+ AGG + S++R GR E
Sbjct: 83 KQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP 141
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
AR + Q+ E L+S +I+RDLKPEN+L +D +++ DFG + + +
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTWX- 197
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL---IVPA--- 180
+CG+P Y+APE++ + Y++ VD W++G +++E+ GYPPF +Q+ IV
Sbjct: 198 -LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
Query: 181 ----LHPDCVDMCLKLLSANTVDRL-----SFNEFYHHRFLRRNSAI------LRAPFHI 225
D D+ LL + R N+ +H++ I + APF I
Sbjct: 257 FPSHFSSDLKDLLRNLLQVDLTKRFGNLPNGVNDIKNHKWFATTDWIAIYQRKVEAPF-I 315
Query: 226 P 226
P
Sbjct: 316 P 316
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 114 bits (286), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 126/241 (52%), Gaps = 28/241 (11%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQ 66
K ++ L+ E L +VN P +++L +F+ + +++V+E+ AGG + S++R GR E
Sbjct: 83 KQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP 141
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
AR + Q+ E L+S +I+RDLKPEN+L +D +++ DFG + + +
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTWX- 197
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL---IVPA--- 180
+CG+P Y+APE++ + Y++ VD W++G +++E+ GYPPF +Q+ IV
Sbjct: 198 -LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKVR 256
Query: 181 ----LHPDCVDMCLKLLSANTVDRL-----SFNEFYHHRFLRRNSAI------LRAPFHI 225
D D+ LL + R N+ +H++ I + APF I
Sbjct: 257 FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF-I 315
Query: 226 P 226
P
Sbjct: 316 P 316
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 114 bits (285), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 126/241 (52%), Gaps = 28/241 (11%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQ 66
K ++ L+ E L +VN P +++L +F+ + +++V+E+ AGG + S++R GR E
Sbjct: 84 KQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP 142
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
AR + Q+ E L+S +I+RDLKPEN+L +D +++ DFG + + +
Sbjct: 143 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTWX- 198
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL---IVPA--- 180
+CG+P Y+APE++ + Y++ VD W++G +++E+ GYPPF +Q+ IV
Sbjct: 199 -LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 257
Query: 181 ----LHPDCVDMCLKLLSANTVDRL-----SFNEFYHHRFLRRNSAI------LRAPFHI 225
D D+ LL + R N+ +H++ I + APF I
Sbjct: 258 FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF-I 316
Query: 226 P 226
P
Sbjct: 317 P 317
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 114 bits (285), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 105/211 (49%), Gaps = 18/211 (8%)
Query: 22 SVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQLGAGLEI 81
S+ HPNI+R + + +V+E+ +GG L I GR E AR F QQL +G+
Sbjct: 71 SLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSY 130
Query: 82 LNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVLQ 141
++ + HRDLK EN LL G LKIADFG S + + G+P Y+APEVL
Sbjct: 131 AHAMQVAHRDLKLENTLLDG-SPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLL 189
Query: 142 FQRYDEKV-DMWSVGAILFELLNGYPPFSGRN-------------NVQLIVPA---LHPD 184
+ YD KV D+WS G L+ +L G PF NVQ +P + P+
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPE 249
Query: 185 CVDMCLKLLSANTVDRLSFNEFYHHRFLRRN 215
C + ++ A+ R+S E +H + +N
Sbjct: 250 CRHLISRIFVADPAKRISIPEIRNHEWFLKN 280
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 114 bits (285), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 121/232 (52%), Gaps = 27/232 (11%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E L +VN P +++L +F+ + +++V+E+ GG + S++R GR E AR + Q+
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYM 135
E L+S +I+RDLKPEN++ +D +K+ DFGL+ + + +CG+P Y+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLM---IDQQGYIKVTDFGLAKRVKGRTWX--LCGTPEYL 205
Query: 136 APEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL---IVPA-------LHPDC 185
APE++ + Y++ VD W++G +++E+ GYPPF +Q+ IV D
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 265
Query: 186 VDMCLKLLSANTVDRL-----SFNEFYHHRFLRRNSAI------LRAPFHIP 226
D+ LL + R N+ +H++ I + APF IP
Sbjct: 266 KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF-IP 316
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 114 bits (285), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 126/241 (52%), Gaps = 28/241 (11%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQ 66
K ++ L+ E L +VN P +++L +F+ + +++V+E+ AGG + S++R GR E
Sbjct: 78 KQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP 136
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
AR + Q+ E L+S +I+RDLKPEN+L +D +++ DFG + + +
Sbjct: 137 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTWX- 192
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL---IVPA--- 180
+CG+P Y+APE++ + Y++ VD W++G +++E+ GYPPF +Q+ IV
Sbjct: 193 -LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 251
Query: 181 ----LHPDCVDMCLKLLSANTVDRL-----SFNEFYHHRFLRRNSAI------LRAPFHI 225
D D+ LL + R N+ +H++ I + APF I
Sbjct: 252 FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF-I 310
Query: 226 P 226
P
Sbjct: 311 P 311
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 114 bits (285), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 126/241 (52%), Gaps = 28/241 (11%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQ 66
K ++ L+ E L +VN P +++L +F+ + +++V+E+ AGG + S++R GR E
Sbjct: 83 KQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP 141
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
AR + Q+ E L+S +I+RDLKPEN+L +D +++ DFG + + +
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTWX- 197
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL---IVPA--- 180
+CG+P Y+APE++ + Y++ VD W++G +++E+ GYPPF +Q+ IV
Sbjct: 198 -LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
Query: 181 ----LHPDCVDMCLKLLSANTVDRL-----SFNEFYHHRFLRRNSAI------LRAPFHI 225
D D+ LL + R N+ +H++ I + APF I
Sbjct: 257 FPSHFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAIYQRKVEAPF-I 315
Query: 226 P 226
P
Sbjct: 316 P 316
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 114 bits (285), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 126/241 (52%), Gaps = 28/241 (11%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQ 66
K ++ L+ E L +VN P +++L +F+ + +++V+E+ AGG + S++R GR E
Sbjct: 83 KQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP 141
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
AR + Q+ E L+S +I+RDLKPEN+L +D +++ DFG + + +
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTWX- 197
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL---IVPA--- 180
+CG+P Y+APE++ + Y++ VD W++G +++E+ GYPPF +Q+ IV
Sbjct: 198 -LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
Query: 181 ----LHPDCVDMCLKLLSANTVDRL-----SFNEFYHHRFLRRNSAI------LRAPFHI 225
D D+ LL + R N+ +H++ I + APF I
Sbjct: 257 FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF-I 315
Query: 226 P 226
P
Sbjct: 316 P 316
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 114 bits (285), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 126/241 (52%), Gaps = 28/241 (11%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQ 66
K ++ L+ E L +VN P +++L +F+ + +++V+E+ AGG + S++R GR E
Sbjct: 104 KQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP 162
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
AR + Q+ E L+S +I+RDLKPEN+L +D +++ DFG + + +
Sbjct: 163 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTWX- 218
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL---IVPA--- 180
+CG+P Y+APE++ + Y++ VD W++G +++E+ GYPPF +Q+ IV
Sbjct: 219 -LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 277
Query: 181 ----LHPDCVDMCLKLLSANTVDRL-----SFNEFYHHRFLRRNSAI------LRAPFHI 225
D D+ LL + R N+ +H++ I + APF I
Sbjct: 278 FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF-I 336
Query: 226 P 226
P
Sbjct: 337 P 337
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 114 bits (285), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 121/232 (52%), Gaps = 27/232 (11%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E L +VN P +++L +F+ + +++V+E+ AGG + S++R GR E AR + Q+
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQI 150
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYM 135
E L+S +I+RDLKPEN+L +D +++ DFG + + + +CG+P Y+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTWX--LCGTPEYL 205
Query: 136 APEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL---IVPA-------LHPDC 185
APE++ + Y++ VD W++G +++E+ GYPPF +Q+ IV D
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 265
Query: 186 VDMCLKLLSANTVDRL-----SFNEFYHHRFLRRNSAI------LRAPFHIP 226
D+ LL + R N+ +H++ I + APF IP
Sbjct: 266 KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF-IP 316
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 114 bits (285), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 100/164 (60%), Gaps = 5/164 (3%)
Query: 10 KSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
+ ++ E++ L + HPN+I L + ++ + + L++E AGG L ++ + E+ A
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDV---MLKIADFGLSCTLYPGNYAE 126
+FL+Q+ G+ L+S I H DLKPENI+L LD +V +KI DFGL+ + GN +
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIML--LDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSG 170
+ G+P ++APE++ ++ + DMWS+G I + LL+G PF G
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 114 bits (284), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 100/164 (60%), Gaps = 5/164 (3%)
Query: 10 KSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
+ ++ E++ L + HPN+I L + ++ + + L++E AGG L ++ + E+ A
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDV---MLKIADFGLSCTLYPGNYAE 126
+FL+Q+ G+ L+S I H DLKPENI+L LD +V +KI DFGL+ + GN +
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIML--LDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSG 170
+ G+P ++APE++ ++ + DMWS+G I + LL+G PF G
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 114 bits (284), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 100/164 (60%), Gaps = 5/164 (3%)
Query: 10 KSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
+ ++ E++ L + HPN+I L + ++ + + L++E AGG L ++ + E+ A
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDV---MLKIADFGLSCTLYPGNYAE 126
+FL+Q+ G+ L+S I H DLKPENI+L LD +V +KI DFGL+ + GN +
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIML--LDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSG 170
+ G+P ++APE++ ++ + DMWS+G I + LL+G PF G
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 114 bits (284), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 100/164 (60%), Gaps = 5/164 (3%)
Query: 10 KSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
+ ++ E++ L + HPN+I L + ++ + + L++E AGG L ++ + E+ A
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDV---MLKIADFGLSCTLYPGNYAE 126
+FL+Q+ G+ L+S I H DLKPENI+L LD +V +KI DFGL+ + GN +
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIML--LDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSG 170
+ G+P ++APE++ ++ + DMWS+G I + LL+G PF G
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 114 bits (284), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 126/241 (52%), Gaps = 28/241 (11%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQ 66
K ++ L+ E L +VN P +++L +F+ + +++V+E+ AGG + S++R GR E
Sbjct: 83 KQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP 141
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
AR + Q+ E L+S +I+RDLKPEN+L +D +++ DFG + + +
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTWX- 197
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL---IVPA--- 180
+CG+P Y+APE++ + Y++ VD W++G +++E+ GYPPF +Q+ IV
Sbjct: 198 -LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
Query: 181 ----LHPDCVDMCLKLLSANTVDRL-----SFNEFYHHRFLRRNSAI------LRAPFHI 225
D D+ LL + R N+ +H++ I + APF I
Sbjct: 257 FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF-I 315
Query: 226 P 226
P
Sbjct: 316 P 316
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 114 bits (284), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 100/164 (60%), Gaps = 5/164 (3%)
Query: 10 KSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
+ ++ E++ L + HPN+I L + ++ + + L++E AGG L ++ + E+ A
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDV---MLKIADFGLSCTLYPGNYAE 126
+FL+Q+ G+ L+S I H DLKPENI+L LD +V +KI DFGL+ + GN +
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIML--LDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSG 170
+ G+P ++APE++ ++ + DMWS+G I + LL+G PF G
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 114 bits (284), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 99/161 (61%), Gaps = 5/161 (3%)
Query: 13 LDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL 72
++ E++ L + HPN+I L + ++ + + L++E AGG L ++ + E+ A +FL
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDV---MLKIADFGLSCTLYPGNYAEKVC 129
+Q+ G+ L+S I H DLKPENI+L LD +V +KI DFGL+ + GN + +
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIML--LDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF 178
Query: 130 GSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSG 170
G+P ++APE++ ++ + DMWS+G I + LL+G PF G
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 114 bits (284), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 100/164 (60%), Gaps = 5/164 (3%)
Query: 10 KSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
+ ++ E++ L + HPN+I L + ++ + + L++E AGG L ++ + E+ A
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDV---MLKIADFGLSCTLYPGNYAE 126
+FL+Q+ G+ L+S I H DLKPENI+L LD +V +KI DFGL+ + GN +
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIML--LDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSG 170
+ G+P ++APE++ ++ + DMWS+G I + LL+G PF G
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 114 bits (284), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 100/164 (60%), Gaps = 5/164 (3%)
Query: 10 KSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
+ ++ E++ L + HPN+I L + ++ + + L++E AGG L ++ + E+ A
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDV---MLKIADFGLSCTLYPGNYAE 126
+FL+Q+ G+ L+S I H DLKPENI+L LD +V +KI DFGL+ + GN +
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIML--LDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSG 170
+ G+P ++APE++ ++ + DMWS+G I + LL+G PF G
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 114 bits (284), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 100/164 (60%), Gaps = 5/164 (3%)
Query: 10 KSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
+ ++ E++ L + HPN+I L + ++ + + L++E AGG L ++ + E+ A
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDV---MLKIADFGLSCTLYPGNYAE 126
+FL+Q+ G+ L+S I H DLKPENI+L LD +V +KI DFGL+ + GN +
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIML--LDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSG 170
+ G+P ++APE++ ++ + DMWS+G I + LL+G PF G
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 114 bits (284), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 100/164 (60%), Gaps = 5/164 (3%)
Query: 10 KSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
+ ++ E++ L + HPN+I L + ++ + + L++E AGG L ++ + E+ A
Sbjct: 57 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 116
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDV---MLKIADFGLSCTLYPGNYAE 126
+FL+Q+ G+ L+S I H DLKPENI+L LD +V +KI DFGL+ + GN +
Sbjct: 117 EFLKQILNGVYYLHSLQIAHFDLKPENIML--LDRNVPKPRIKIIDFGLAHKIDFGNEFK 174
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSG 170
+ G+P ++APE++ ++ + DMWS+G I + LL+G PF G
Sbjct: 175 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 218
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 114 bits (284), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 100/164 (60%), Gaps = 5/164 (3%)
Query: 10 KSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
+ ++ E++ L + HPN+I L + ++ + + L++E AGG L ++ + E+ A
Sbjct: 57 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 116
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDV---MLKIADFGLSCTLYPGNYAE 126
+FL+Q+ G+ L+S I H DLKPENI+L LD +V +KI DFGL+ + GN +
Sbjct: 117 EFLKQILNGVYYLHSLQIAHFDLKPENIML--LDRNVPKPRIKIIDFGLAHKIDFGNEFK 174
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSG 170
+ G+P ++APE++ ++ + DMWS+G I + LL+G PF G
Sbjct: 175 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 218
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 113 bits (283), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 104/170 (61%), Gaps = 6/170 (3%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQ 66
K ++ L+ E L +VN P +++L +F+ + +++V+E+ AGG + S++R GR E
Sbjct: 83 KQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP 141
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
AR + Q+ E L+S +I+RDLKPEN+L +D +++ DFG + + +
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTWX- 197
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL 176
+CG+P Y+APE++ + Y++ VD W++G +++E+ GYPPF +Q+
Sbjct: 198 -LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 113 bits (283), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 126/241 (52%), Gaps = 28/241 (11%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQ 66
K ++ L+ E L +VN P +++L +F+ + +++V+E+ AGG + S++R GR E
Sbjct: 83 KQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP 141
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
AR + Q+ E L+S +I+RDLKPEN++ +D +++ DFG + + +
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLI---IDQQGYIQVTDFGFAKRVKGRTWX- 197
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL---IVPA--- 180
+CG+P Y+APE++ + Y++ VD W++G +++E+ GYPPF +Q+ IV
Sbjct: 198 -LCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
Query: 181 ----LHPDCVDMCLKLLSANTVDRL-----SFNEFYHHRFLRRNSAI------LRAPFHI 225
D D+ LL + R N+ +H++ I + APF I
Sbjct: 257 FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF-I 315
Query: 226 P 226
P
Sbjct: 316 P 316
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 113 bits (283), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 94/174 (54%)
Query: 3 KKLNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGR 62
KKL+ L+ E + HPNI+RL D+ Q E+ +LV + GG L I
Sbjct: 42 KKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF 101
Query: 63 VPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPG 122
E A +QQ+ + +S+ I+HR+LKPEN+LL+ +K+ADFGL+ +
Sbjct: 102 YSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 161
Query: 123 NYAEKVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL 176
G+P Y++PEVL+ Y + VD+W+ G IL+ LL GYPPF + +L
Sbjct: 162 EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRL 215
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 113 bits (283), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 97/165 (58%), Gaps = 5/165 (3%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E++ S ++H NI+ + D + ++C +LV+E+ G LS YI HG + TA F Q+
Sbjct: 61 EVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQI 120
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEK--VCGSPL 133
G++ + I+HRD+KP+NIL +D + LKI DFG++ L + + V G+
Sbjct: 121 LDGIKHAHDMRIVHRDIKPQNIL---IDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQ 177
Query: 134 YMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV 178
Y +PE + + DE D++S+G +L+E+L G PPF+G V + +
Sbjct: 178 YFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAI 222
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 113 bits (283), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 109/216 (50%), Gaps = 16/216 (7%)
Query: 13 LDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL 72
L E+ S + HPNI+RL+ F ++L++E+ G + ++ + EQ ++
Sbjct: 60 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYI 119
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSP 132
+L L +S +IHRD+KPEN+LL + LKIADFG S P + + G+
Sbjct: 120 TELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVHA-PSSRRXXLXGTL 175
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI------VPALHPDCV 186
Y+ PE+++ + +DEKVD+WS+G + +E L G PPF N Q V PD V
Sbjct: 176 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVEFTFPDFV 234
Query: 187 -----DMCLKLLSANTVDRLSFNEFYHHRFLRRNSA 217
D+ +LL N R E H ++ NS+
Sbjct: 235 TEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 270
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 113 bits (283), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 120/229 (52%), Gaps = 14/229 (6%)
Query: 5 LNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVP 64
L H K + E+ S+++P+++ F+ ++ +++V+E C +L + V
Sbjct: 81 LKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVT 140
Query: 65 EQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL-YPGN 123
E AR F++Q G++ L+++ +IHRDLK N+ L+DD+ +KI DFGL+ + + G
Sbjct: 141 EPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLF---LNDDMDVKIGDFGLATKIEFDGE 197
Query: 124 YAEKVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSG----------RNN 173
+ +CG+P Y+APEVL + + +VD+WS+G IL+ LL G PPF + N
Sbjct: 198 RKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN 257
Query: 174 VQLIVPALHPDCVDMCLKLLSANTVDRLSFNEFYHHRFLRRNSAILRAP 222
+ ++P + ++L A+ R S E F A +R P
Sbjct: 258 EYSVPRHINPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMRLP 306
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 113 bits (283), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 94/174 (54%)
Query: 3 KKLNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGR 62
KKL+ L+ E + HPNI+RL D+ Q E+ +LV + GG L I
Sbjct: 42 KKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF 101
Query: 63 VPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPG 122
E A +QQ+ + +S+ I+HR+LKPEN+LL+ +K+ADFGL+ +
Sbjct: 102 YSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 161
Query: 123 NYAEKVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL 176
G+P Y++PEVL+ Y + VD+W+ G IL+ LL GYPPF + +L
Sbjct: 162 EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRL 215
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 113 bits (283), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 94/174 (54%)
Query: 3 KKLNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGR 62
KKL+ L+ E + HPNI+RL D+ Q E+ +LV + GG L I
Sbjct: 41 KKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF 100
Query: 63 VPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPG 122
E A +QQ+ + +S+ I+HR+LKPEN+LL+ +K+ADFGL+ +
Sbjct: 101 YSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 160
Query: 123 NYAEKVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL 176
G+P Y++PEVL+ Y + VD+W+ G IL+ LL GYPPF + +L
Sbjct: 161 EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRL 214
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 113 bits (283), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 100/164 (60%), Gaps = 5/164 (3%)
Query: 10 KSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
+ ++ E++ L + HPN+I L + ++ + + L++E AGG L ++ + E+ A
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDV---MLKIADFGLSCTLYPGNYAE 126
+FL+Q+ G+ L+S I H DLKPENI+L LD +V +KI DFGL+ + GN +
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIML--LDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSG 170
+ G+P ++APE++ ++ + DMWS+G I + LL+G PF G
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 113 bits (283), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 120/229 (52%), Gaps = 14/229 (6%)
Query: 5 LNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVP 64
L H K + E+ S+++P+++ F+ ++ +++V+E C +L + V
Sbjct: 81 LKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVT 140
Query: 65 EQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL-YPGN 123
E AR F++Q G++ L+++ +IHRDLK N+ L+DD+ +KI DFGL+ + + G
Sbjct: 141 EPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLF---LNDDMDVKIGDFGLATKIEFDGE 197
Query: 124 YAEKVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSG----------RNN 173
+ +CG+P Y+APEVL + + +VD+WS+G IL+ LL G PPF + N
Sbjct: 198 RKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN 257
Query: 174 VQLIVPALHPDCVDMCLKLLSANTVDRLSFNEFYHHRFLRRNSAILRAP 222
+ ++P + ++L A+ R S E F A +R P
Sbjct: 258 EYSVPRHINPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMRLP 306
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 113 bits (283), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 120/229 (52%), Gaps = 14/229 (6%)
Query: 5 LNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVP 64
L H K + E+ S+++P+++ F+ ++ +++V+E C +L + V
Sbjct: 81 LKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVT 140
Query: 65 EQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL-YPGN 123
E AR F++Q G++ L+++ +IHRDLK N+ L+DD+ +KI DFGL+ + + G
Sbjct: 141 EPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLF---LNDDMDVKIGDFGLATKIEFDGE 197
Query: 124 YAEKVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSG----------RNN 173
+ +CG+P Y+APEVL + + +VD+WS+G IL+ LL G PPF + N
Sbjct: 198 RKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN 257
Query: 174 VQLIVPALHPDCVDMCLKLLSANTVDRLSFNEFYHHRFLRRNSAILRAP 222
+ ++P + ++L A+ R S E F A +R P
Sbjct: 258 EYSVPRHINPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMRLP 306
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 113 bits (283), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 120/229 (52%), Gaps = 14/229 (6%)
Query: 5 LNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVP 64
L H K + E+ S+++P+++ F+ ++ +++V+E C +L + V
Sbjct: 65 LKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVT 124
Query: 65 EQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL-YPGN 123
E AR F++Q G++ L+++ +IHRDLK N+ L+DD+ +KI DFGL+ + + G
Sbjct: 125 EPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLF---LNDDMDVKIGDFGLATKIEFDGE 181
Query: 124 YAEKVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSG----------RNN 173
+ +CG+P Y+APEVL + + +VD+WS+G IL+ LL G PPF + N
Sbjct: 182 RKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN 241
Query: 174 VQLIVPALHPDCVDMCLKLLSANTVDRLSFNEFYHHRFLRRNSAILRAP 222
+ ++P + ++L A+ R S E F A +R P
Sbjct: 242 EYSVPRHINPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMRLP 290
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 113 bits (282), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 126/241 (52%), Gaps = 28/241 (11%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQ 66
K ++ L+ E L +VN P +++L +F+ + +++V+E+ AGG + S++R GR E
Sbjct: 83 KQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP 141
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
AR + Q+ E L+S +I+RDLKPEN+L +D +++ DFG + + +
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTWX- 197
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL---IVPA--- 180
+CG+P Y+APE++ + Y++ VD W++G +++++ GYPPF +Q+ IV
Sbjct: 198 -LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGKVR 256
Query: 181 ----LHPDCVDMCLKLLSANTVDRL-----SFNEFYHHRFLRRNSAI------LRAPFHI 225
D D+ LL + R N+ +H++ I + APF I
Sbjct: 257 FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF-I 315
Query: 226 P 226
P
Sbjct: 316 P 316
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 113 bits (282), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 125/241 (51%), Gaps = 28/241 (11%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQ 66
K ++ L+ E L +VN P +++L +F+ + +++V+E+ GG + S++R GR E
Sbjct: 84 KQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP 142
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
AR + Q+ E L+S +I+RDLKPEN++ +D +K+ DFG + + +
Sbjct: 143 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLM---IDQQGYIKVTDFGFAKRVKGRTWX- 198
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL---IVPA--- 180
+CG+P Y+APE++ + Y++ VD W++G +++E+ GYPPF +Q+ IV
Sbjct: 199 -LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 257
Query: 181 ----LHPDCVDMCLKLLSANTVDRL-----SFNEFYHHRFLRRNSAI------LRAPFHI 225
D D+ LL + R N+ +H++ I + APF I
Sbjct: 258 FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF-I 316
Query: 226 P 226
P
Sbjct: 317 P 317
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 125/241 (51%), Gaps = 28/241 (11%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQ 66
K ++ L+ E L +VN P +++L +F+ + +++V+E+ GG + S++R GR E
Sbjct: 83 KQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP 141
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
AR + Q+ E L+S +I+RDLKPEN++ +D +K+ DFG + + +
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLM---IDQQGYIKVTDFGFAKRVKGRTWX- 197
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL---IVPA--- 180
+CG+P Y+APE++ + Y++ VD W++G +++E+ GYPPF +Q+ IV
Sbjct: 198 -LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
Query: 181 ----LHPDCVDMCLKLLSANTVDRL-----SFNEFYHHRFLRRNSAI------LRAPFHI 225
D D+ LL + R N+ +H++ I + APF I
Sbjct: 257 FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF-I 315
Query: 226 P 226
P
Sbjct: 316 P 316
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 104/211 (49%), Gaps = 18/211 (8%)
Query: 22 SVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQLGAGLEI 81
S+ HPNI+R + + +++E+ +GG L I GR E AR F QQL +G+
Sbjct: 72 SLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSY 131
Query: 82 LNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVLQ 141
+S I HRDLK EN LL G LKI DFG S + + + G+P Y+APEVL
Sbjct: 132 CHSMQICHRDLKLENTLLDG-SPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLL 190
Query: 142 FQRYDEKV-DMWSVGAILFELLNGYPPFSG-------RNNVQLIVPA---------LHPD 184
Q YD K+ D+WS G L+ +L G PF R +Q I+ + P+
Sbjct: 191 RQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPE 250
Query: 185 CVDMCLKLLSANTVDRLSFNEFYHHRFLRRN 215
C + ++ A+ R+S E H + +N
Sbjct: 251 CCHLISRIFVADPATRISIPEIKTHSWFLKN 281
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 125/241 (51%), Gaps = 28/241 (11%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQ 66
K ++ L+ E +VN P +++L +F+ + +++V+E+ GG + S++R GR E
Sbjct: 84 KQIEHTLN-EKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEP 142
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
AR + Q+ E L+S +I+RDLKPEN+L +D +K+ADFG + + +
Sbjct: 143 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLL---IDQQGYIKVADFGFAKRVKGRTWX- 198
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL---IVPA--- 180
+CG+P Y+APE++ + Y++ VD W++G +++E+ GYPPF +Q+ IV
Sbjct: 199 -LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 257
Query: 181 ----LHPDCVDMCLKLLSANTVDRL-----SFNEFYHHRFLRRNSAI------LRAPFHI 225
D D+ LL + R N+ +H++ I + APF I
Sbjct: 258 FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF-I 316
Query: 226 P 226
P
Sbjct: 317 P 317
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 91/166 (54%)
Query: 3 KKLNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGR 62
KKL+ L+ E + HPNI+RL D+ Q E+ +LV + GG L I
Sbjct: 65 KKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF 124
Query: 63 VPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPG 122
E A +QQ+ + +S+ I+HR+LKPEN+LL+ +K+ADFGL+ +
Sbjct: 125 YSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 184
Query: 123 NYAEKVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPF 168
G+P Y++PEVL+ Y + VD+W+ G IL+ LL GYPPF
Sbjct: 185 EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 230
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 114/217 (52%), Gaps = 19/217 (8%)
Query: 13 LDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL 72
++ E++ L V HPNII L D ++ + L++E +GG L ++ + E+ A F+
Sbjct: 62 IEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFI 121
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDV---MLKIADFGLSCTLYPGNYAEKVC 129
+Q+ G+ L++ I H DLKPENI+L LD ++ +K+ DFGL+ + G + +
Sbjct: 122 KQILDGVNYLHTKKIAHFDLKPENIML--LDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF 179
Query: 130 GSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI--VPALHPD--- 184
G+P ++APE++ ++ + DMWS+G I + LL+G PF G + + + A+ D
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDE 239
Query: 185 ---------CVDMCLKLLSANTVDRLSFNEFYHHRFL 212
D KLL T RL+ E H ++
Sbjct: 240 EFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 121/232 (52%), Gaps = 27/232 (11%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E L +VN P +++L +F+ + +++V+E+ GG + S++R GR E AR + Q+
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYM 135
E L+S +I+RDLKPEN++ +D +++ DFGL+ + + +CG+P Y+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLM---IDQQGYIQVTDFGLAKRVKGRTWX--LCGTPEYL 205
Query: 136 APEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL---IVPA-------LHPDC 185
APE++ + Y++ VD W++G +++E+ GYPPF +Q+ IV D
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 265
Query: 186 VDMCLKLLSANTVDRL-----SFNEFYHHRFLRRNSAI------LRAPFHIP 226
D+ LL + R N+ +H++ I + APF IP
Sbjct: 266 KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF-IP 316
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 112 bits (281), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 123/238 (51%), Gaps = 27/238 (11%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQ 66
K ++ L+ E L +VN P +++L +F+ + +++V+E+ GG + S++R GR E
Sbjct: 83 KQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEP 141
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
AR + Q+ E L+S +I+RDLKPEN++ +D +K+ DFG + + +
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLM---IDQQGYIKVTDFGFAKRVKGRTWX- 197
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL---IVPA--- 180
+CG+P Y+APE++ + Y++ VD W++G +++E+ GYPPF +Q+ IV
Sbjct: 198 -LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
Query: 181 ----LHPDCVDMCLKLLSANTVDRL-----SFNEFYHHRFLRRNSAI------LRAPF 223
D D+ LL + R N+ +H++ I + APF
Sbjct: 257 FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 112 bits (281), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 123/238 (51%), Gaps = 27/238 (11%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQ 66
K ++ L+ E L +VN P +++L +F+ + +++V+E+ GG + S++R GR E
Sbjct: 69 KQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP 127
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
AR + Q+ E L+S +I+RDLKPEN+L +D +++ DFG + + +
Sbjct: 128 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTWT- 183
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL---IVPA--- 180
+CG+P Y+APE++ + Y++ VD W++G +++E+ GYPPF +Q+ IV
Sbjct: 184 -LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 242
Query: 181 ----LHPDCVDMCLKLLSANTVDRL-----SFNEFYHHRFLRRNSAI------LRAPF 223
D D+ LL + R N+ +H++ I + APF
Sbjct: 243 FPSHFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAIYQRKVEAPF 300
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 112 bits (281), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 123/238 (51%), Gaps = 27/238 (11%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQ 66
K ++ L+ E L +VN P +++L +F+ + +++V+E+ GG + S++R GR E
Sbjct: 84 KQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP 142
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
AR + Q+ E L+S +I+RDLKPEN+L +D +++ DFG + + +
Sbjct: 143 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTWT- 198
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL---IVPA--- 180
+CG+P Y+APE++ + Y++ VD W++G +++E+ GYPPF +Q+ IV
Sbjct: 199 -LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 257
Query: 181 ----LHPDCVDMCLKLLSANTVDRL-----SFNEFYHHRFLRRNSAI------LRAPF 223
D D+ LL + R N+ +H++ I + APF
Sbjct: 258 FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 315
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 112 bits (281), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 125/241 (51%), Gaps = 28/241 (11%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQ 66
K ++ L+ E L +VN P +++L +F+ + +++V+E+ GG + S++R GR E
Sbjct: 83 KQIEHTLN-EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP 141
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
AR + Q+ E L+S +I+RDLKPEN+L +D +++ DFG + + +
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTWX- 197
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL---IVPA--- 180
+CG+P Y+APE++ + Y++ VD W++G +++E+ GYPPF +Q+ IV
Sbjct: 198 -LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
Query: 181 ----LHPDCVDMCLKLLSANTVDRL-----SFNEFYHHRFLRRNSAI------LRAPFHI 225
D D+ LL + R N+ +H++ I + APF I
Sbjct: 257 FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF-I 315
Query: 226 P 226
P
Sbjct: 316 P 316
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 112 bits (280), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 125/241 (51%), Gaps = 28/241 (11%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQ 66
K ++ L+ E L +VN P +++L +F+ + +++V+E+ GG + S++R GR E
Sbjct: 83 KQIEHTLN-EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP 141
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
AR + Q+ E L+S +I+RDLKPEN+L +D +++ DFG + + +
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTWX- 197
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL---IVPA--- 180
+CG+P Y+APE++ + Y++ VD W++G +++E+ GYPPF +Q+ IV
Sbjct: 198 -LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
Query: 181 ----LHPDCVDMCLKLLSANTVDRL-----SFNEFYHHRFLRRNSAI------LRAPFHI 225
D D+ LL + R N+ +H++ I + APF I
Sbjct: 257 FPSHFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAIYQRKVEAPF-I 315
Query: 226 P 226
P
Sbjct: 316 P 316
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 112 bits (280), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 123/238 (51%), Gaps = 27/238 (11%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQ 66
K ++ L+ E L +VN P +++L +F+ + +++V+E+ GG + S++R GR E
Sbjct: 83 KQIEHTLN-EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP 141
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
AR + Q+ E L+S +I+RDLKPEN+L +D +++ DFG + + +
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTWX- 197
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL---IVPA--- 180
+CG+P Y+APE++ + Y++ VD W++G +++E+ GYPPF +Q+ IV
Sbjct: 198 -LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
Query: 181 ----LHPDCVDMCLKLLSANTVDRL-----SFNEFYHHRFLRRNSAI------LRAPF 223
D D+ LL + R N+ +H++ I + APF
Sbjct: 257 FPSHFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 112 bits (280), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 116/229 (50%), Gaps = 14/229 (6%)
Query: 5 LNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVP 64
L H + + E++ S+ H +++ F+ + +F+V+E C +L + +
Sbjct: 56 LKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALT 115
Query: 65 EQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL-YPGN 123
E AR +L+Q+ G + L+ + +IHRDLK N+ L ++D+ +KI DFGL+ + Y G
Sbjct: 116 EPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGE 172
Query: 124 YAEKVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSG----------RNN 173
+ +CG+P Y+APEVL + + +VD+WS+G I++ LL G PPF + N
Sbjct: 173 RKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 232
Query: 174 VQLIVPALHPDCVDMCLKLLSANTVDRLSFNEFYHHRFLRRNSAILRAP 222
I ++P + K+L + R + NE + F R P
Sbjct: 233 EYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLP 281
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 116/229 (50%), Gaps = 14/229 (6%)
Query: 5 LNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVP 64
L H + + E++ S+ H +++ F+ + +F+V+E C +L + +
Sbjct: 56 LKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALT 115
Query: 65 EQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL-YPGN 123
E AR +L+Q+ G + L+ + +IHRDLK N+ L ++D+ +KI DFGL+ + Y G
Sbjct: 116 EPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGE 172
Query: 124 YAEKVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSG----------RNN 173
+ +CG+P Y+APEVL + + +VD+WS+G I++ LL G PPF + N
Sbjct: 173 RKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 232
Query: 174 VQLIVPALHPDCVDMCLKLLSANTVDRLSFNEFYHHRFLRRNSAILRAP 222
I ++P + K+L + R + NE + F R P
Sbjct: 233 EYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLP 281
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 99/175 (56%), Gaps = 7/175 (4%)
Query: 3 KKLNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGR 62
KK KH+ S + L +V HP ++ L +FQ + ++ V+++ GG L +++
Sbjct: 79 KKEEKHIMSERNV---LLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERC 135
Query: 63 VPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGL-SCTLYP 121
E AR + ++ + L L+S +I++RDLKPENILL D + + DFGL +
Sbjct: 136 FLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILL---DSQGHIVLTDFGLCKENIEH 192
Query: 122 GNYAEKVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL 176
+ CG+P Y+APEVL Q YD VD W +GA+L+E+L G PPF RN ++
Sbjct: 193 NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEM 247
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 123/238 (51%), Gaps = 27/238 (11%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQ 66
K ++ L+ E L +VN P +++L +F+ + +++V+E+ GG + S++R GR E
Sbjct: 84 KQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP 142
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
AR + Q+ E L+S +I+RDLKPEN+L +D +++ DFG + + +
Sbjct: 143 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTWX- 198
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL---IVPA--- 180
+CG+P Y+APE++ + Y++ VD W++G +++E+ GYPPF +Q+ IV
Sbjct: 199 -LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 257
Query: 181 ----LHPDCVDMCLKLLSANTVDRL-----SFNEFYHHRFLRRNSAI------LRAPF 223
D D+ LL + R N+ +H++ I + APF
Sbjct: 258 FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIXNHKWFATTDWIAIYQRKVEAPF 315
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 99/164 (60%), Gaps = 5/164 (3%)
Query: 10 KSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
+ ++ E++ L + HPN+I L + ++ + + L+ E AGG L ++ + E+ A
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEAT 117
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDV---MLKIADFGLSCTLYPGNYAE 126
+FL+Q+ G+ L+S I H DLKPENI+L LD +V +KI DFGL+ + GN +
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIML--LDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSG 170
+ G+P ++APE++ ++ + DMWS+G I + LL+G PF G
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 116/229 (50%), Gaps = 14/229 (6%)
Query: 5 LNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVP 64
L H + + E++ S+ H +++ F+ + +F+V+E C +L + +
Sbjct: 60 LKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALT 119
Query: 65 EQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL-YPGN 123
E AR +L+Q+ G + L+ + +IHRDLK N+ L ++D+ +KI DFGL+ + Y G
Sbjct: 120 EPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGE 176
Query: 124 YAEKVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSG----------RNN 173
+ +CG+P Y+APEVL + + +VD+WS+G I++ LL G PPF + N
Sbjct: 177 RKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 236
Query: 174 VQLIVPALHPDCVDMCLKLLSANTVDRLSFNEFYHHRFLRRNSAILRAP 222
I ++P + K+L + R + NE + F R P
Sbjct: 237 EYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLP 285
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 123/238 (51%), Gaps = 27/238 (11%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQ 66
K ++ L+ E L +VN P +++L +F+ + +++V+E+ GG + S++R GR E
Sbjct: 83 KQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP 141
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
AR + Q+ E L+S +I+RDLKPEN+L +D +++ DFG + + +
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTWX- 197
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL---IVPA--- 180
+CG+P Y+APE++ + Y++ VD W++G +++E+ GYPPF +Q+ IV
Sbjct: 198 -LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
Query: 181 ----LHPDCVDMCLKLLSANTVDRL-----SFNEFYHHRFLRRNSAI------LRAPF 223
D D+ LL + R N+ +H++ I + APF
Sbjct: 257 FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 123/238 (51%), Gaps = 27/238 (11%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQ 66
K ++ L+ E L +VN P +++L +F+ + +++V+E+ GG + S++R GR E
Sbjct: 84 KQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP 142
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
AR + Q+ E L+S +I+RDLKPEN+L +D +++ DFG + + +
Sbjct: 143 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTWX- 198
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL---IVPA--- 180
+CG+P Y+APE++ + Y++ VD W++G +++E+ GYPPF +Q+ IV
Sbjct: 199 -LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 257
Query: 181 ----LHPDCVDMCLKLLSANTVDRL-----SFNEFYHHRFLRRNSAI------LRAPF 223
D D+ LL + R N+ +H++ I + APF
Sbjct: 258 FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 315
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 123/238 (51%), Gaps = 27/238 (11%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQ 66
K ++ L+ E L +VN P +++L +F+ + +++V+E+ GG + S++R GR E
Sbjct: 104 KQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP 162
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
AR + Q+ E L+S +I+RDLKPEN+L +D +++ DFG + + +
Sbjct: 163 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTWX- 218
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL---IVPA--- 180
+CG+P Y+APE++ + Y++ VD W++G +++E+ GYPPF +Q+ IV
Sbjct: 219 -LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 277
Query: 181 ----LHPDCVDMCLKLLSANTVDRL-----SFNEFYHHRFLRRNSAI------LRAPF 223
D D+ LL + R N+ +H++ I + APF
Sbjct: 278 FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 335
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 123/238 (51%), Gaps = 27/238 (11%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQ 66
K ++ L+ E L +VN P +++L +F+ + +++V+E+ GG + S++R GR E
Sbjct: 84 KQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP 142
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
AR + Q+ E L+S +I+RDLKPEN+L +D +++ DFG + + +
Sbjct: 143 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTWX- 198
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL---IVPA--- 180
+CG+P Y+APE++ + Y++ VD W++G +++E+ GYPPF +Q+ IV
Sbjct: 199 -LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 257
Query: 181 ----LHPDCVDMCLKLLSANTVDRL-----SFNEFYHHRFLRRNSAI------LRAPF 223
D D+ LL + R N+ +H++ I + APF
Sbjct: 258 FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 315
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 125/241 (51%), Gaps = 28/241 (11%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQ 66
K ++ L+ E L +VN P +++L +F+ + +++V+E+ AGG + S++R GR E
Sbjct: 83 KQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP 141
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
AR + Q+ E L+S +I+RDLKPEN+L +D +++ DFG + + +
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTWX- 197
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL---IVPA--- 180
+CG+P Y+AP ++ + Y++ VD W++G +++E+ GYPPF +Q+ IV
Sbjct: 198 -LCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
Query: 181 ----LHPDCVDMCLKLLSANTVDRL-----SFNEFYHHRFLRRNSAI------LRAPFHI 225
D D+ LL + R N+ +H++ I + APF I
Sbjct: 257 FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF-I 315
Query: 226 P 226
P
Sbjct: 316 P 316
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 123/238 (51%), Gaps = 27/238 (11%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQ 66
K ++ L+ E L +VN P +++L +F+ + +++V+E+ GG + S++R GR E
Sbjct: 83 KQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP 141
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
AR + Q+ E L+S +I+RDLKPEN+L +D +++ DFG + + +
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTWX- 197
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL---IVPA--- 180
+CG+P Y+APE++ + Y++ VD W++G +++E+ GYPPF +Q+ IV
Sbjct: 198 -LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
Query: 181 ----LHPDCVDMCLKLLSANTVDRL-----SFNEFYHHRFLRRNSAI------LRAPF 223
D D+ LL + R N+ +H++ I + APF
Sbjct: 257 FPSHFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 123/238 (51%), Gaps = 27/238 (11%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQ 66
K ++ L+ E L +VN P +++L +F+ + +++V+E+ GG + S++R GR E
Sbjct: 83 KQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP 141
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
AR + Q+ E L+S +I+RDLKPEN+L +D +++ DFG + + +
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTWX- 197
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL---IVPA--- 180
+CG+P Y+APE++ + Y++ VD W++G +++E+ GYPPF +Q+ IV
Sbjct: 198 -LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
Query: 181 ----LHPDCVDMCLKLLSANTVDRL-----SFNEFYHHRFLRRNSAI------LRAPF 223
D D+ LL + R N+ +H++ I + APF
Sbjct: 257 FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 123/238 (51%), Gaps = 27/238 (11%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQ 66
K ++ L+ E L +VN P +++L +F+ + +++V+E+ GG + S++R GR E
Sbjct: 84 KQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP 142
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
AR + Q+ E L+S +I+RDLKPEN+L +D +++ DFG + + +
Sbjct: 143 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTWX- 198
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL---IVPA--- 180
+CG+P Y+APE++ + Y++ VD W++G +++E+ GYPPF +Q+ IV
Sbjct: 199 -LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 257
Query: 181 ----LHPDCVDMCLKLLSANTVDRL-----SFNEFYHHRFLRRNSAI------LRAPF 223
D D+ LL + R N+ +H++ I + APF
Sbjct: 258 FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 315
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 112 bits (279), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 123/238 (51%), Gaps = 27/238 (11%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQ 66
K ++ L+ E L +VN P +++L +F+ + +++V+E+ GG + S++R GR E
Sbjct: 76 KQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP 134
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
AR + Q+ E L+S +I+RDLKPEN+L +D +++ DFG + + +
Sbjct: 135 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTWX- 190
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL---IVPA--- 180
+CG+P Y+APE++ + Y++ VD W++G +++E+ GYPPF +Q+ IV
Sbjct: 191 -LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 249
Query: 181 ----LHPDCVDMCLKLLSANTVDRL-----SFNEFYHHRFLRRNSAI------LRAPF 223
D D+ LL + R N+ +H++ I + APF
Sbjct: 250 FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 307
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 112 bits (279), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 105/211 (49%), Gaps = 18/211 (8%)
Query: 22 SVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQLGAGLEI 81
S+ HPNI+R + + +V+E+ +GG L I GR E AR F QQL +G+
Sbjct: 70 SLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSY 129
Query: 82 LNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVLQ 141
++ + HRDLK EN LL G LKI DFG S + + + G+P Y+APEVL
Sbjct: 130 CHAMQVCHRDLKLENTLLDG-SPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLL 188
Query: 142 FQRYDEKV-DMWSVGAILFELLNGYPPFSGRN-------------NVQLIVPA---LHPD 184
+ YD KV D+WS G L+ +L G PF NVQ +P + P+
Sbjct: 189 KKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPE 248
Query: 185 CVDMCLKLLSANTVDRLSFNEFYHHRFLRRN 215
C + ++ A+ R+S E +H + +N
Sbjct: 249 CRHLISRIFVADPAKRISIPEIRNHEWFLKN 279
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 112 bits (279), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 124/241 (51%), Gaps = 28/241 (11%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQ 66
K ++ L+ E L +VN P + +L +F+ + +++V+E+ GG + S++R GR E
Sbjct: 84 KQIEHTLN-EKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP 142
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
AR + Q+ E L+S +I+RDLKPEN++ +D +K+ DFG + + +
Sbjct: 143 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLM---IDQQGYIKVTDFGFAKRVKGRTWX- 198
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL---IVPA--- 180
+CG+P Y+APE++ + Y++ VD W++G +++E+ GYPPF +Q+ IV
Sbjct: 199 -LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 257
Query: 181 ----LHPDCVDMCLKLLSANTVDRL-----SFNEFYHHRFLRRNSAI------LRAPFHI 225
D D+ LL + R N+ +H++ I + APF I
Sbjct: 258 FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF-I 316
Query: 226 P 226
P
Sbjct: 317 P 317
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 112 bits (279), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 124/241 (51%), Gaps = 28/241 (11%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQ 66
K ++ L+ E L +VN P + +L +F+ + +++V+E+ GG + S++R GR E
Sbjct: 84 KQIEHTLN-EKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP 142
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
AR + Q+ E L+S +I+RDLKPEN++ +D +K+ DFG + + +
Sbjct: 143 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLM---IDQQGYIKVTDFGFAKRVKGRTWX- 198
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL---IVPA--- 180
+CG+P Y+APE++ + Y++ VD W++G +++E+ GYPPF +Q+ IV
Sbjct: 199 -LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 257
Query: 181 ----LHPDCVDMCLKLLSANTVDRL-----SFNEFYHHRFLRRNSAI------LRAPFHI 225
D D+ LL + R N+ +H++ I + APF I
Sbjct: 258 FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF-I 316
Query: 226 P 226
P
Sbjct: 317 P 317
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 112 bits (279), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 105/211 (49%), Gaps = 18/211 (8%)
Query: 22 SVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQLGAGLEI 81
S+ HPNI+R + + +V+E+ +GG L I GR E AR F QQL +G+
Sbjct: 71 SLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSY 130
Query: 82 LNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVLQ 141
++ + HRDLK EN LL G LKI DFG S + + + G+P Y+APEVL
Sbjct: 131 CHAMQVCHRDLKLENTLLDG-SPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLL 189
Query: 142 FQRYDEKV-DMWSVGAILFELLNGYPPFSGRN-------------NVQLIVPA---LHPD 184
+ YD KV D+WS G L+ +L G PF NVQ +P + P+
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPE 249
Query: 185 CVDMCLKLLSANTVDRLSFNEFYHHRFLRRN 215
C + ++ A+ R+S E +H + +N
Sbjct: 250 CRHLISRIFVADPAKRISIPEIRNHEWFLKN 280
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 112 bits (279), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 123/238 (51%), Gaps = 27/238 (11%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQ 66
K ++ L+ E L +VN P +++L +F+ + +++V+E+ GG + S++R GR E
Sbjct: 84 KQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP 142
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
AR + Q+ E L+S +I+RDLKPEN+L +D +++ DFG + + +
Sbjct: 143 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTWX- 198
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL---IVPA--- 180
+CG+P Y+APE++ + Y++ VD W++G +++E+ GYPPF +Q+ IV
Sbjct: 199 -LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 257
Query: 181 ----LHPDCVDMCLKLLSANTVDRL-----SFNEFYHHRFLRRNSAI------LRAPF 223
D D+ LL + R N+ +H++ I + APF
Sbjct: 258 FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 315
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 112 bits (279), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 123/238 (51%), Gaps = 27/238 (11%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQ 66
K ++ L+ E L +VN P +++L +F+ + +++V+E+ GG + S++R GR E
Sbjct: 83 KQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP 141
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
AR + Q+ E L+S +I+RDLKPEN+L +D +++ DFG + + +
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTWX- 197
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL---IVPA--- 180
+CG+P Y+APE++ + Y++ VD W++G +++E+ GYPPF +Q+ IV
Sbjct: 198 -LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
Query: 181 ----LHPDCVDMCLKLLSANTVDRL-----SFNEFYHHRFLRRNSAI------LRAPF 223
D D+ LL + R N+ +H++ I + APF
Sbjct: 257 FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 112 bits (279), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 123/238 (51%), Gaps = 27/238 (11%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQ 66
K ++ L+ E L +VN P +++L +F+ + +++V+E+ GG + S++R GR E
Sbjct: 83 KQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP 141
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
AR + Q+ E L+S +I+RDLKPEN+L +D +++ DFG + + +
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTWX- 197
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL---IVPA--- 180
+CG+P Y+APE++ + Y++ VD W++G +++E+ GYPPF +Q+ IV
Sbjct: 198 -LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
Query: 181 ----LHPDCVDMCLKLLSANTVDRL-----SFNEFYHHRFLRRNSAI------LRAPF 223
D D+ LL + R N+ +H++ I + APF
Sbjct: 257 FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 111 bits (278), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 125/241 (51%), Gaps = 28/241 (11%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQ 66
K ++ L+ E L +VN P +++L +F+ + +++V+E+ GG + S++R GR E
Sbjct: 83 KQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP 141
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
AR + Q+ E L+S +I+RDLKPEN++ +D +++ DFG + + +
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLM---IDQQGYIQVTDFGFAKRVKGRTWX- 197
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL---IVPA--- 180
+CG+P Y+APE++ + Y++ VD W++G +++E+ GYPPF +Q+ IV
Sbjct: 198 -LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
Query: 181 ----LHPDCVDMCLKLLSANTVDRL-----SFNEFYHHRFLRRNSAI------LRAPFHI 225
D D+ LL + R N+ +H++ I + APF I
Sbjct: 257 FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF-I 315
Query: 226 P 226
P
Sbjct: 316 P 316
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 111 bits (278), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/226 (34%), Positives = 115/226 (50%), Gaps = 23/226 (10%)
Query: 11 SCLDCELNFLS-SVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
C E LS + NHP + +LF FQ + +F V+EF GG+L +I+ R E AR
Sbjct: 68 ECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARAR 127
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGL-SCTLYPGNYAEKV 128
+ ++ + L L+ II+RDLK +N+L LD + K+ADFG+ + G
Sbjct: 128 FYAAEIISALMFLHDKGIIYRDLKLDNVL---LDHEGHCKLADFGMCKEGICNGVTTATF 184
Query: 129 CGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRN---------NVQLIVP 179
CG+P Y+APE+LQ Y VD W++G +L+E+L G+ PF N N +++ P
Sbjct: 185 CGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYP 244
Query: 180 A-LHPDCVDMCLKLLSANTVDRL-SFNEFYHHRFLRRNSAILRAPF 223
LH D + ++ N RL S + H AILR PF
Sbjct: 245 TWLHEDATGILKSFMTKNPTMRLGSLTQGGEH-------AILRHPF 283
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 111 bits (278), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 123/238 (51%), Gaps = 27/238 (11%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQ 66
K ++ L+ E L +VN P +++L +F+ + +++V+E+ GG + S++R GR E
Sbjct: 76 KQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP 134
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
AR + Q+ E L+S +I+RDLKPEN+L +D +++ DFG + + +
Sbjct: 135 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTWX- 190
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL---IVPA--- 180
+CG+P Y+APE++ + Y++ VD W++G +++E+ GYPPF +Q+ IV
Sbjct: 191 -LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 249
Query: 181 ----LHPDCVDMCLKLLSANTVDRL-----SFNEFYHHRFLRRNSAI------LRAPF 223
D D+ LL + R N+ +H++ I + APF
Sbjct: 250 FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 307
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 111 bits (278), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 116/230 (50%), Gaps = 14/230 (6%)
Query: 5 LNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVP 64
L H + + E++ S+ H +++ F+ + +F+V+E C +L + +
Sbjct: 80 LKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALT 139
Query: 65 EQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL-YPGN 123
E AR +L+Q+ G + L+ + +IHRDLK N+ L ++D+ +KI DFGL+ + Y G
Sbjct: 140 EPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGE 196
Query: 124 YAEKVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSG----------RNN 173
+ +CG+P Y+APEVL + + +VD+WS+G I++ LL G PPF + N
Sbjct: 197 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 256
Query: 174 VQLIVPALHPDCVDMCLKLLSANTVDRLSFNEFYHHRFLRRNSAILRAPF 223
I ++P + K+L + R + NE + F R P
Sbjct: 257 EYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPI 306
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 111 bits (278), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 125/241 (51%), Gaps = 28/241 (11%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQ 66
K ++ L+ E L +VN P +++L +F+ + +++V+E+ AGG + S++R GR E
Sbjct: 83 KQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP 141
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
AR + Q+ E L+S +I+RDLKPEN+L +D +++ DFG + + +
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTWX- 197
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL---IVPA--- 180
+ G+P Y+APE++ + Y++ VD W++G +++E+ GYPPF +Q+ IV
Sbjct: 198 -LAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
Query: 181 ----LHPDCVDMCLKLLSANTVDRL-----SFNEFYHHRFLRRNSAI------LRAPFHI 225
D D+ LL + R N+ +H++ I + APF I
Sbjct: 257 FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF-I 315
Query: 226 P 226
P
Sbjct: 316 P 316
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 111 bits (278), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 124/241 (51%), Gaps = 28/241 (11%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQ 66
K ++ L+ E L +VN P + +L +F+ + +++V+E+ GG + S++R GR E
Sbjct: 84 KQIEHTLN-EKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEP 142
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
AR + Q+ E L+S +I+RDLKPEN++ +D +K+ DFG + + +
Sbjct: 143 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLM---IDQQGYIKVTDFGFAKRVKGRTWX- 198
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL---IVPA--- 180
+CG+P Y+APE++ + Y++ VD W++G +++E+ GYPPF +Q+ IV
Sbjct: 199 -LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 257
Query: 181 ----LHPDCVDMCLKLLSANTVDRL-----SFNEFYHHRFLRRNSAI------LRAPFHI 225
D D+ LL + R N+ +H++ I + APF I
Sbjct: 258 FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF-I 316
Query: 226 P 226
P
Sbjct: 317 P 317
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 111 bits (278), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 116/229 (50%), Gaps = 14/229 (6%)
Query: 5 LNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVP 64
L H + + E++ S+ H +++ F+ + +F+V+E C +L + +
Sbjct: 54 LKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALT 113
Query: 65 EQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL-YPGN 123
E AR +L+Q+ G + L+ + +IHRDLK N+ L ++D+ +KI DFGL+ + Y G
Sbjct: 114 EPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGE 170
Query: 124 YAEKVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSG----------RNN 173
+ +CG+P Y+APEVL + + +VD+WS+G I++ LL G PPF + N
Sbjct: 171 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 230
Query: 174 VQLIVPALHPDCVDMCLKLLSANTVDRLSFNEFYHHRFLRRNSAILRAP 222
I ++P + K+L + R + NE + F R P
Sbjct: 231 EYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLP 279
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 111 bits (278), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 116/230 (50%), Gaps = 14/230 (6%)
Query: 5 LNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVP 64
L H + + E++ S+ H +++ F+ + +F+V+E C +L + +
Sbjct: 78 LKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALT 137
Query: 65 EQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL-YPGN 123
E AR +L+Q+ G + L+ + +IHRDLK N+ L ++D+ +KI DFGL+ + Y G
Sbjct: 138 EPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGE 194
Query: 124 YAEKVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSG----------RNN 173
+ +CG+P Y+APEVL + + +VD+WS+G I++ LL G PPF + N
Sbjct: 195 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 254
Query: 174 VQLIVPALHPDCVDMCLKLLSANTVDRLSFNEFYHHRFLRRNSAILRAPF 223
I ++P + K+L + R + NE + F R P
Sbjct: 255 EYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPI 304
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 111 bits (277), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 113/231 (48%), Gaps = 15/231 (6%)
Query: 3 KKLNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGR 62
KKL+ L+ E + HPNI+RL D+ E +LV + GG L I
Sbjct: 67 KKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREY 126
Query: 63 VPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPG 122
E A + Q+ + ++ H I+HRDLKPEN+LL+ +K+ADFGL+ +
Sbjct: 127 YSEADASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGE 186
Query: 123 NYAE-KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI---- 177
A G+P Y++PEVL+ Y + VD+W+ G IL+ LL GYPPF + +L
Sbjct: 187 QQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIK 246
Query: 178 ----------VPALHPDCVDMCLKLLSANTVDRLSFNEFYHHRFLRRNSAI 218
+ P+ ++ ++L+ N R++ ++ H ++ + S +
Sbjct: 247 AGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRITADQALKHPWVCQRSTV 297
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 111 bits (277), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 125/241 (51%), Gaps = 28/241 (11%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQ 66
K ++ L+ E L +VN P +++L +F+ + +++V+E+ AGG + S++R GR E
Sbjct: 83 KQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP 141
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
AR + Q+ E L+S +I+RDLKPEN+L +D +++ DFG + + +
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTWX- 197
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL---IVPA--- 180
+CG+P +APE++ + Y++ VD W++G +++E+ GYPPF +Q+ IV
Sbjct: 198 -LCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
Query: 181 ----LHPDCVDMCLKLLSANTVDRL-----SFNEFYHHRFLRRNSAI------LRAPFHI 225
D D+ LL + R N+ +H++ I + APF I
Sbjct: 257 FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF-I 315
Query: 226 P 226
P
Sbjct: 316 P 316
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 110 bits (276), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 125/241 (51%), Gaps = 28/241 (11%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQ 66
K ++ L+ E L +VN P +++L +F+ + +++V+E+ AGG + S++R GR E
Sbjct: 83 KQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP 141
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
AR + Q+ E L+S +I+RDLKPEN+L +D +++ DFG + + +
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLL---IDQQGYIQVTDFGFAKRVKGRTWX- 197
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL---IVPA--- 180
+ G+P Y+APE++ + Y++ VD W++G +++E+ GYPPF +Q+ IV
Sbjct: 198 -LXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
Query: 181 ----LHPDCVDMCLKLLSANTVDRL-----SFNEFYHHRFLRRNSAI------LRAPFHI 225
D D+ LL + R N+ +H++ I + APF I
Sbjct: 257 FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF-I 315
Query: 226 P 226
P
Sbjct: 316 P 316
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 110 bits (276), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 92/151 (60%), Gaps = 4/151 (2%)
Query: 19 FLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQLGAG 78
F + NHP ++ L FQ E+ +F V+E+ GG+L +++ ++PE+ AR + ++
Sbjct: 106 FEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA 165
Query: 79 LEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGL-SCTLYPGNYAEKVCGSPLYMAP 137
L L+ II+RDLK +N+L LD + +K+ D+G+ L PG+ CG+P Y+AP
Sbjct: 166 LNYLHERGIIYRDLKLDNVL---LDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAP 222
Query: 138 EVLQFQRYDEKVDMWSVGAILFELLNGYPPF 168
E+L+ + Y VD W++G ++FE++ G PF
Sbjct: 223 EILRGEDYGFSVDWWALGVLMFEMMAGRSPF 253
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 110 bits (276), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 92/151 (60%), Gaps = 4/151 (2%)
Query: 19 FLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQLGAG 78
F + NHP ++ L FQ E+ +F V+E+ GG+L +++ ++PE+ AR + ++
Sbjct: 74 FEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA 133
Query: 79 LEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGL-SCTLYPGNYAEKVCGSPLYMAP 137
L L+ II+RDLK +N+L LD + +K+ D+G+ L PG+ CG+P Y+AP
Sbjct: 134 LNYLHERGIIYRDLKLDNVL---LDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAP 190
Query: 138 EVLQFQRYDEKVDMWSVGAILFELLNGYPPF 168
E+L+ + Y VD W++G ++FE++ G PF
Sbjct: 191 EILRGEDYGFSVDWWALGVLMFEMMAGRSPF 221
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 110 bits (275), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 92/152 (60%), Gaps = 4/152 (2%)
Query: 19 FLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQLGAG 78
F + NHP ++ L FQ E+ +F V+E+ GG+L +++ ++PE+ AR + ++
Sbjct: 59 FEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA 118
Query: 79 LEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGL-SCTLYPGNYAEKVCGSPLYMAP 137
L L+ II+RDLK +N+L LD + +K+ D+G+ L PG+ CG+P Y+AP
Sbjct: 119 LNYLHERGIIYRDLKLDNVL---LDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAP 175
Query: 138 EVLQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
E+L+ + Y VD W++G ++FE++ G PF
Sbjct: 176 EILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 110 bits (275), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 92/152 (60%), Gaps = 4/152 (2%)
Query: 19 FLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQLGAG 78
F + NHP ++ L FQ E+ +F V+E+ GG+L +++ ++PE+ AR + ++
Sbjct: 63 FEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA 122
Query: 79 LEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGL-SCTLYPGNYAEKVCGSPLYMAP 137
L L+ II+RDLK +N+L LD + +K+ D+G+ L PG+ CG+P Y+AP
Sbjct: 123 LNYLHERGIIYRDLKLDNVL---LDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAP 179
Query: 138 EVLQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
E+L+ + Y VD W++G ++FE++ G PF
Sbjct: 180 EILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 110 bits (274), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 113/221 (51%), Gaps = 20/221 (9%)
Query: 11 SCLDCELNFLSSVNHPN-IIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
C E L+ ++ P + +L FQ + ++ V+E+ GG+L +I+ G+ E A
Sbjct: 64 ECTMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAV 123
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCT-LYPGNYAEKV 128
+ ++ GL L+ II+RDLK +N++L D + +KIADFG+ + G +
Sbjct: 124 FYAAEISIGLFFLHKRGIIYRDLKLDNVML---DSEGHIKIADFGMCKEHMMDGVTTREF 180
Query: 129 CGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV---------- 178
CG+P Y+APE++ +Q Y + VD W+ G +L+E+L G PPF G + +L
Sbjct: 181 CGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYP 240
Query: 179 PALHPDCVDMCLKLLSANTVDRLSFN-----EFYHHRFLRR 214
+L + V +C L++ + RL + H F RR
Sbjct: 241 KSLSKEAVSICKGLMTKHPAKRLGCGPEGERDVREHAFFRR 281
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 110 bits (274), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 110/231 (47%), Gaps = 15/231 (6%)
Query: 3 KKLNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGR 62
KKL+ L+ E + HPNI+RL D+ E +L+ + GG L I
Sbjct: 58 KKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREY 117
Query: 63 VPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPG 122
E A +QQ+ + + ++HRDLKPEN+LL+ +K+ADFGL+ +
Sbjct: 118 YSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGE 177
Query: 123 NYAE-KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI---- 177
A G+P Y++PEVL+ Y + VD+W+ G IL+ LL GYPPF + +L
Sbjct: 178 QQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIK 237
Query: 178 ----------VPALHPDCVDMCLKLLSANTVDRLSFNEFYHHRFLRRNSAI 218
+ P+ D+ K+L+ N R++ E H ++ S +
Sbjct: 238 AGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISHRSTV 288
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 108 bits (271), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 104/211 (49%), Gaps = 18/211 (8%)
Query: 22 SVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQLGAGLEI 81
S+ HPNI+R + + +V+E+ +GG L I GR E AR F QQL +G+
Sbjct: 71 SLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSY 130
Query: 82 LNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVLQ 141
++ + HRDLK EN LL G LKI FG S + + + G+P Y+APEVL
Sbjct: 131 CHAMQVCHRDLKLENTLLDG-SPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLL 189
Query: 142 FQRYDEKV-DMWSVGAILFELLNGYPPFSGRN-------------NVQLIVPA---LHPD 184
+ YD KV D+WS G L+ +L G PF NVQ +P + P+
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPE 249
Query: 185 CVDMCLKLLSANTVDRLSFNEFYHHRFLRRN 215
C + ++ A+ R+S E +H + +N
Sbjct: 250 CRHLISRIFVADPAKRISIPEIRNHEWFLKN 280
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 108 bits (271), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 114/220 (51%), Gaps = 19/220 (8%)
Query: 10 KSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
+ ++ E++ L V H N+I L D ++ + L++E +GG L ++ + E+ A
Sbjct: 59 REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT 118
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDV---MLKIADFGLSCTLYPGNYAE 126
F++Q+ G+ L++ I H DLKPENI+L LD ++ +K+ DFGL+ + G +
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIML--LDKNIPIPHIKLIDFGLAHEIEDGVEFK 176
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI--VPALHPD 184
+ G+P ++APE++ ++ + DMWS+G I + LL+G PF G + + + A+ D
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYD 236
Query: 185 ------------CVDMCLKLLSANTVDRLSFNEFYHHRFL 212
D KLL T RL+ E H ++
Sbjct: 237 FDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 108 bits (271), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 102/179 (56%), Gaps = 15/179 (8%)
Query: 10 KSCLDCELNFLSSVNHPNIIRLFDAF--QAENCIFLVVEFCAGGNLSSYIRLHGR----V 63
K L E+N L + HPNI+R +D + +++V+E+C GG+L+S I + +
Sbjct: 49 KQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYL 108
Query: 64 PEQTARKFLQQLGAGLEILN-----SHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCT 118
E+ + + QL L+ + H ++HRDLKP N+ L G + +K+ DFGL+
Sbjct: 109 DEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQN---VKLGDFGLARI 165
Query: 119 L-YPGNYAEKVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL 176
L + ++A++ G+P YM+PE + Y+EK D+WS+G +L+EL PPF+ + +L
Sbjct: 166 LNHDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKEL 224
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 108 bits (270), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 105/203 (51%), Gaps = 16/203 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E + +S ++HP ++L+ FQ + ++ + + G L YIR G E R + ++
Sbjct: 85 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 144
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY---AEKVCGSP 132
+ LE L+ IIHRDLKPENIL L++D+ ++I DFG + L P + A G+
Sbjct: 145 VSALEYLHGKGIIHRDLKPENIL---LNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 201
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNN---VQLIV-------PALH 182
Y++PE+L + + D+W++G I+++L+ G PPF N Q I+ A
Sbjct: 202 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPAAFF 261
Query: 183 PDCVDMCLKLLSANTVDRLSFNE 205
P D+ KLL + RL E
Sbjct: 262 PKARDLVEKLLVLDATKRLGCEE 284
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 108 bits (270), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 114/220 (51%), Gaps = 19/220 (8%)
Query: 10 KSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
+ ++ E++ L V H N+I L D ++ + L++E +GG L ++ + E+ A
Sbjct: 59 REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT 118
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDV---MLKIADFGLSCTLYPGNYAE 126
F++Q+ G+ L++ I H DLKPENI+L LD ++ +K+ DFGL+ + G +
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIML--LDKNIPIPHIKLIDFGLAHEIEDGVEFK 176
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI--VPALHPD 184
+ G+P ++APE++ ++ + DMWS+G I + LL+G PF G + + + A+ D
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYD 236
Query: 185 ------------CVDMCLKLLSANTVDRLSFNEFYHHRFL 212
D KLL T RL+ E H ++
Sbjct: 237 FDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 108 bits (270), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 115/226 (50%), Gaps = 16/226 (7%)
Query: 10 KSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYI-RLHGRVPEQTA 68
K + E+ +S + HP ++ L DAF+ +N + ++ EF +GG L + H ++ E A
Sbjct: 92 KETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEA 151
Query: 69 RKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKV 128
++++Q+ GL ++ ++ +H DLKPENI+ + + LK+ DFGL+ L P +
Sbjct: 152 VEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSN-ELKLIDFGLTAHLDPKQSVKVT 210
Query: 129 CGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI----------- 177
G+ + APEV + + DMWSVG + + LL+G PF G N+ + +
Sbjct: 211 TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMD 270
Query: 178 ---VPALHPDCVDMCLKLLSANTVDRLSFNEFYHHRFLRRNSAILR 220
+ D D KLL A+ R++ ++ H +L +A R
Sbjct: 271 DSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGR 316
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 108 bits (270), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 104/211 (49%), Gaps = 18/211 (8%)
Query: 22 SVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQLGAGLEI 81
S+ HPNI+R + + +V+E+ +GG L I GR E AR F QQL +G+
Sbjct: 71 SLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSY 130
Query: 82 LNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVLQ 141
++ + HRDLK EN LL G LKI FG S + + + G+P Y+APEVL
Sbjct: 131 CHAMQVCHRDLKLENTLLDG-SPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLL 189
Query: 142 FQRYDEKV-DMWSVGAILFELLNGYPPFSGRN-------------NVQLIVPA---LHPD 184
+ YD KV D+WS G L+ +L G PF NVQ +P + P+
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPE 249
Query: 185 CVDMCLKLLSANTVDRLSFNEFYHHRFLRRN 215
C + ++ A+ R+S E +H + +N
Sbjct: 250 CRHLISRIFVADPAKRISIPEIRNHEWFLKN 280
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 114/217 (52%), Gaps = 18/217 (8%)
Query: 13 LDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL 72
+ E+ L ++ H +I +L+ + N IF+V+E+C GG L YI R+ E+ R
Sbjct: 55 IKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVF 114
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN---YAEKVC 129
+Q+ + + ++S HRDLKPEN+L D+ LK+ DFGL C GN + + C
Sbjct: 115 RQIVSAVAYVHSQGYAHRDLKPENLL---FDEYHKLKLIDFGL-CAKPKGNKDYHLQTCC 170
Query: 130 GSPLYMAPEVLQFQRY-DEKVDMWSVGAILFELLNGYPPFSGRNNVQLI---------VP 179
GS Y APE++Q + Y + D+WS+G +L+ L+ G+ PF N + L VP
Sbjct: 171 GSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVP 230
Query: 180 A-LHPDCVDMCLKLLSANTVDRLSFNEFYHHRFLRRN 215
L P + + ++L + R+S +H ++ ++
Sbjct: 231 KWLSPSSILLLQQMLQVDPKKRISMKNLLNHPWIMQD 267
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 101/179 (56%), Gaps = 15/179 (8%)
Query: 10 KSCLDCELNFLSSVNHPNIIRLFDAF--QAENCIFLVVEFCAGGNLSSYIRLHGR----V 63
K L E+N L + HPNI+R +D + +++V+E+C GG+L+S I + +
Sbjct: 49 KQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYL 108
Query: 64 PEQTARKFLQQLGAGLEILN-----SHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCT 118
E+ + + QL L+ + H ++HRDLKP N+ L G + +K+ DFGL+
Sbjct: 109 DEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQN---VKLGDFGLARI 165
Query: 119 L-YPGNYAEKVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL 176
L + ++A+ G+P YM+PE + Y+EK D+WS+G +L+EL PPF+ + +L
Sbjct: 166 LNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKEL 224
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 108 bits (269), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 115/226 (50%), Gaps = 16/226 (7%)
Query: 10 KSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIR-LHGRVPEQTA 68
K + E+ +S + HP ++ L DAF+ +N + ++ EF +GG L + H ++ E A
Sbjct: 198 KETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEA 257
Query: 69 RKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKV 128
++++Q+ GL ++ ++ +H DLKPENI+ + + LK+ DFGL+ L P +
Sbjct: 258 VEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSN-ELKLIDFGLTAHLDPKQSVKVT 316
Query: 129 CGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI----------- 177
G+ + APEV + + DMWSVG + + LL+G PF G N+ + +
Sbjct: 317 TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMD 376
Query: 178 ---VPALHPDCVDMCLKLLSANTVDRLSFNEFYHHRFLRRNSAILR 220
+ D D KLL A+ R++ ++ H +L +A R
Sbjct: 377 DSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGR 422
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 108 bits (269), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 101/179 (56%), Gaps = 15/179 (8%)
Query: 10 KSCLDCELNFLSSVNHPNIIRLFDAF--QAENCIFLVVEFCAGGNLSSYIRLHGR----V 63
K L E+N L + HPNI+R +D + +++V+E+C GG+L+S I + +
Sbjct: 49 KQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYL 108
Query: 64 PEQTARKFLQQLGAGLEILN-----SHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCT 118
E+ + + QL L+ + H ++HRDLKP N+ L G + +K+ DFGL+
Sbjct: 109 DEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQN---VKLGDFGLARI 165
Query: 119 L-YPGNYAEKVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL 176
L + ++A+ G+P YM+PE + Y+EK D+WS+G +L+EL PPF+ + +L
Sbjct: 166 LNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKEL 224
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 107 bits (268), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 102/188 (54%), Gaps = 14/188 (7%)
Query: 26 PNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSH 85
P + +L FQ + ++ V+E+ GG+L +I+ GR E A + ++ GL L S
Sbjct: 81 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK 140
Query: 86 HIIHRDLKPENILLSGLDDDVMLKIADFGL-SCTLYPGNYAEKVCGSPLYMAPEVLQFQR 144
II+RDLK +N++L D + +KIADFG+ ++ G + CG+P Y+APE++ +Q
Sbjct: 141 GIIYRDLKLDNVML---DSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQP 197
Query: 145 YDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV----------PALHPDCVDMCLKLLS 194
Y + VD W+ G +L+E+L G PF G + +L ++ + V +C L++
Sbjct: 198 YGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMT 257
Query: 195 ANTVDRLS 202
+ RL
Sbjct: 258 KHPGKRLG 265
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 107 bits (268), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 110/231 (47%), Gaps = 15/231 (6%)
Query: 3 KKLNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGR 62
KKL+ L+ E + HPNI+RL D+ E +L+ + GG L I
Sbjct: 47 KKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREY 106
Query: 63 VPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPG 122
E A +QQ+ + + ++HR+LKPEN+LL+ +K+ADFGL+ +
Sbjct: 107 YSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGE 166
Query: 123 NYAE-KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI---- 177
A G+P Y++PEVL+ Y + VD+W+ G IL+ LL GYPPF + +L
Sbjct: 167 QQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIK 226
Query: 178 ----------VPALHPDCVDMCLKLLSANTVDRLSFNEFYHHRFLRRNSAI 218
+ P+ D+ K+L+ N R++ E H ++ S +
Sbjct: 227 AGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISHRSTV 277
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 107 bits (268), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 114/220 (51%), Gaps = 19/220 (8%)
Query: 10 KSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
+ ++ E++ L V H N+I L D ++ + L++E +GG L ++ + E+ A
Sbjct: 59 REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT 118
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDV---MLKIADFGLSCTLYPGNYAE 126
F++Q+ G+ L++ I H DLKPENI+L LD ++ +K+ DFGL+ + G +
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIML--LDKNIPIPHIKLIDFGLAHEIEDGVEFK 176
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI--VPALHPD 184
+ G+P ++APE++ ++ + DMWS+G I + LL+G PF G + + + ++ D
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYD 236
Query: 185 ------------CVDMCLKLLSANTVDRLSFNEFYHHRFL 212
D KLL T RL+ E H ++
Sbjct: 237 FDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 107 bits (268), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 103/203 (50%), Gaps = 16/203 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E + +S ++HP ++L+ FQ + ++ + + G L YIR G E R + ++
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 141
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY---AEKVCGSP 132
+ LE L+ IIHRDLKPENIL L++D+ ++I DFG + L P + A G+
Sbjct: 142 VSALEYLHGKGIIHRDLKPENIL---LNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 198
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIVPALH---------- 182
Y++PE+L + + D+W++G I+++L+ G PPF N + +
Sbjct: 199 QYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFF 258
Query: 183 PDCVDMCLKLLSANTVDRLSFNE 205
P D+ KLL + RL E
Sbjct: 259 PKARDLVEKLLVLDATKRLGCEE 281
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 107 bits (268), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 114/220 (51%), Gaps = 19/220 (8%)
Query: 10 KSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
+ ++ E++ L V H N+I L D ++ + L++E +GG L ++ + E+ A
Sbjct: 59 REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT 118
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDV---MLKIADFGLSCTLYPGNYAE 126
F++Q+ G+ L++ I H DLKPENI+L LD ++ +K+ DFGL+ + G +
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIML--LDKNIPIPHIKLIDFGLAHEIEDGVEFK 176
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI--VPALHPD 184
+ G+P ++APE++ ++ + DMWS+G I + LL+G PF G + + + ++ D
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYD 236
Query: 185 ------------CVDMCLKLLSANTVDRLSFNEFYHHRFL 212
D KLL T RL+ E H ++
Sbjct: 237 FDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 107 bits (267), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 102/188 (54%), Gaps = 14/188 (7%)
Query: 26 PNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSH 85
P + +L FQ + ++ V+E+ GG+L +I+ GR E A + ++ GL L S
Sbjct: 402 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK 461
Query: 86 HIIHRDLKPENILLSGLDDDVMLKIADFGL-SCTLYPGNYAEKVCGSPLYMAPEVLQFQR 144
II+RDLK +N++L D + +KIADFG+ ++ G + CG+P Y+APE++ +Q
Sbjct: 462 GIIYRDLKLDNVML---DSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQP 518
Query: 145 YDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV----------PALHPDCVDMCLKLLS 194
Y + VD W+ G +L+E+L G PF G + +L ++ + V +C L++
Sbjct: 519 YGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMT 578
Query: 195 ANTVDRLS 202
+ RL
Sbjct: 579 KHPGKRLG 586
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 107 bits (267), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 114/220 (51%), Gaps = 19/220 (8%)
Query: 10 KSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
+ ++ E++ L V H N+I L D ++ + L++E +GG L ++ + E+ A
Sbjct: 59 REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT 118
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDV---MLKIADFGLSCTLYPGNYAE 126
F++Q+ G+ L++ I H DLKPENI+L LD ++ +K+ DFGL+ + G +
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIML--LDKNIPIPHIKLIDFGLAHEIEDGVEFK 176
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI--VPALHPD 184
+ G+P ++APE++ ++ + DMWS+G I + LL+G PF G + + + ++ D
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYD 236
Query: 185 ------------CVDMCLKLLSANTVDRLSFNEFYHHRFL 212
D KLL T RL+ E H ++
Sbjct: 237 FDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 107 bits (267), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 104/203 (51%), Gaps = 16/203 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E + +S ++HP ++L+ FQ + ++ + + G L YIR G E R + ++
Sbjct: 79 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 138
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY---AEKVCGSP 132
+ LE L+ IIHRDLKPENIL L++D+ ++I DFG + L P + A G+
Sbjct: 139 VSALEYLHGKGIIHRDLKPENIL---LNEDMHIQITDFGTAKVLSPESKQARANSFVGTA 195
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNN---VQLIVP-------ALH 182
Y++PE+L + + D+W++G I+++L+ G PPF N Q I+
Sbjct: 196 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF 255
Query: 183 PDCVDMCLKLLSANTVDRLSFNE 205
P D+ KLL + RL E
Sbjct: 256 PKARDLVEKLLVLDATKRLGCEE 278
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 107 bits (267), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 104/203 (51%), Gaps = 16/203 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E + +S ++HP ++L+ FQ + ++ + + G L YIR G E R + ++
Sbjct: 57 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 116
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN---YAEKVCGSP 132
+ LE L+ IIHRDLKPENIL L++D+ ++I DFG + L P + A G+
Sbjct: 117 VSALEYLHGKGIIHRDLKPENIL---LNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 173
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNN---VQLIVP-------ALH 182
Y++PE+L + + D+W++G I+++L+ G PPF N Q I+
Sbjct: 174 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF 233
Query: 183 PDCVDMCLKLLSANTVDRLSFNE 205
P D+ KLL + RL E
Sbjct: 234 PKARDLVEKLLVLDATKRLGCEE 256
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 107 bits (267), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 104/203 (51%), Gaps = 16/203 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E + +S ++HP ++L+ FQ + ++ + + G L YIR G E R + ++
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEI 141
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY---AEKVCGSP 132
+ LE L+ IIHRDLKPENIL L++D+ ++I DFG + L P + A G+
Sbjct: 142 VSALEYLHGKGIIHRDLKPENIL---LNEDMHIQITDFGTAKVLSPESKQARANSFVGTA 198
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNN---VQLIVP-------ALH 182
Y++PE+L + + D+W++G I+++L+ G PPF N Q I+
Sbjct: 199 QYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF 258
Query: 183 PDCVDMCLKLLSANTVDRLSFNE 205
P D+ KLL + RL E
Sbjct: 259 PKARDLVEKLLVLDATKRLGCEE 281
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 107 bits (267), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 104/203 (51%), Gaps = 16/203 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E + +S ++HP ++L+ FQ + ++ + + G L YIR G E R + ++
Sbjct: 58 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 117
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY---AEKVCGSP 132
+ LE L+ IIHRDLKPENIL L++D+ ++I DFG + L P + A G+
Sbjct: 118 VSALEYLHGKGIIHRDLKPENIL---LNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 174
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNN---VQLIVP-------ALH 182
Y++PE+L + + D+W++G I+++L+ G PPF N Q I+
Sbjct: 175 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF 234
Query: 183 PDCVDMCLKLLSANTVDRLSFNE 205
P D+ KLL + RL E
Sbjct: 235 PKARDLVEKLLVLDATKRLGCEE 257
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 107 bits (267), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 104/203 (51%), Gaps = 16/203 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E + +S ++HP ++L+ FQ + ++ + + G L YIR G E R + ++
Sbjct: 64 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 123
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY---AEKVCGSP 132
+ LE L+ IIHRDLKPENIL L++D+ ++I DFG + L P + A G+
Sbjct: 124 VSALEYLHGKGIIHRDLKPENIL---LNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 180
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNN---VQLIVP-------ALH 182
Y++PE+L + + D+W++G I+++L+ G PPF N Q I+
Sbjct: 181 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF 240
Query: 183 PDCVDMCLKLLSANTVDRLSFNE 205
P D+ KLL + RL E
Sbjct: 241 PKARDLVEKLLVLDATKRLGCEE 263
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 107 bits (266), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 104/203 (51%), Gaps = 16/203 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E + +S ++HP ++L+ FQ + ++ + + G L YIR G E R + ++
Sbjct: 83 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 142
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY---AEKVCGSP 132
+ LE L+ IIHRDLKPENIL L++D+ ++I DFG + L P + A G+
Sbjct: 143 VSALEYLHGKGIIHRDLKPENIL---LNEDMHIQITDFGTAKVLSPESKQARANSFVGTA 199
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNN---VQLIVP-------ALH 182
Y++PE+L + + D+W++G I+++L+ G PPF N Q I+
Sbjct: 200 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF 259
Query: 183 PDCVDMCLKLLSANTVDRLSFNE 205
P D+ KLL + RL E
Sbjct: 260 PKARDLVEKLLVLDATKRLGCEE 282
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 107 bits (266), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 104/203 (51%), Gaps = 16/203 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E + +S ++HP ++L+ FQ + ++ + + G L YIR G E R + ++
Sbjct: 79 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 138
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY---AEKVCGSP 132
+ LE L+ IIHRDLKPENIL L++D+ ++I DFG + L P + A G+
Sbjct: 139 VSALEYLHGKGIIHRDLKPENIL---LNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 195
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNN---VQLIVP-------ALH 182
Y++PE+L + + D+W++G I+++L+ G PPF N Q I+
Sbjct: 196 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF 255
Query: 183 PDCVDMCLKLLSANTVDRLSFNE 205
P D+ KLL + RL E
Sbjct: 256 PKARDLVEKLLVLDATKRLGCEE 278
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 107 bits (266), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 104/203 (51%), Gaps = 16/203 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E + +S ++HP ++L+ FQ + ++ + + G L YIR G E R + ++
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 141
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY---AEKVCGSP 132
+ LE L+ IIHRDLKPENIL L++D+ ++I DFG + L P + A G+
Sbjct: 142 VSALEYLHGKGIIHRDLKPENIL---LNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 198
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNN---VQLIVP-------ALH 182
Y++PE+L + + D+W++G I+++L+ G PPF N Q I+
Sbjct: 199 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF 258
Query: 183 PDCVDMCLKLLSANTVDRLSFNE 205
P D+ KLL + RL E
Sbjct: 259 PKARDLVEKLLVLDATKRLGCEE 281
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 107 bits (266), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 114/220 (51%), Gaps = 14/220 (6%)
Query: 13 LDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL 72
L E+ + ++HPNI+RL++ F I+L++E+ G L ++ EQ +
Sbjct: 70 LRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIM 129
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSP 132
++L L + +IHRD+KPEN+LL LKIADFG S P + +CG+
Sbjct: 130 EELADALMYCHGKKVIHRDIKPENLLLGLK---GELKIADFGWSVHA-PSLRRKTMCGTL 185
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNN---------VQLIVPALHP 183
Y+ PE+++ + ++EKVD+W +G + +ELL G PPF ++ V L PA P
Sbjct: 186 DYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPASVP 245
Query: 184 DCV-DMCLKLLSANTVDRLSFNEFYHHRFLRRNSAILRAP 222
D+ KLL N +RL + H ++R NS + P
Sbjct: 246 TGAQDLISKLLRHNPSERLPLAQVSAHPWVRANSRRVLPP 285
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 107 bits (266), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 104/203 (51%), Gaps = 16/203 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E + +S ++HP ++L+ FQ + ++ + + G L YIR G E R + ++
Sbjct: 80 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 139
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY---AEKVCGSP 132
+ LE L+ IIHRDLKPENIL L++D+ ++I DFG + L P + A G+
Sbjct: 140 VSALEYLHGKGIIHRDLKPENIL---LNEDMHIQITDFGTAKVLSPESKQARANAFVGTA 196
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNN---VQLIVP-------ALH 182
Y++PE+L + + D+W++G I+++L+ G PPF N Q I+
Sbjct: 197 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF 256
Query: 183 PDCVDMCLKLLSANTVDRLSFNE 205
P D+ KLL + RL E
Sbjct: 257 PKARDLVEKLLVLDATKRLGCEE 279
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 107 bits (266), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 104/203 (51%), Gaps = 16/203 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E + +S ++HP ++L+ FQ + ++ + + G L YIR G E R + ++
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 141
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY---AEKVCGSP 132
+ LE L+ IIHRDLKPENIL L++D+ ++I DFG + L P + A G+
Sbjct: 142 VSALEYLHGKGIIHRDLKPENIL---LNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 198
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNN---VQLIVP-------ALH 182
Y++PE+L + + D+W++G I+++L+ G PPF N Q I+
Sbjct: 199 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF 258
Query: 183 PDCVDMCLKLLSANTVDRLSFNE 205
P D+ KLL + RL E
Sbjct: 259 PKARDLVEKLLVLDATKRLGCEE 281
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 107 bits (266), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 104/203 (51%), Gaps = 16/203 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E + +S ++HP ++L+ FQ + ++ + + G L YIR G E R + ++
Sbjct: 80 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 139
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY---AEKVCGSP 132
+ LE L+ IIHRDLKPENIL L++D+ ++I DFG + L P + A G+
Sbjct: 140 VSALEYLHGKGIIHRDLKPENIL---LNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 196
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNN---VQLIVP-------ALH 182
Y++PE+L + + D+W++G I+++L+ G PPF N Q I+
Sbjct: 197 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF 256
Query: 183 PDCVDMCLKLLSANTVDRLSFNE 205
P D+ KLL + RL E
Sbjct: 257 PKARDLVEKLLVLDATKRLGCEE 279
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 107 bits (266), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 104/203 (51%), Gaps = 16/203 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E + +S ++HP ++L+ FQ + ++ + + G L YIR G E R + ++
Sbjct: 60 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 119
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN---YAEKVCGSP 132
+ LE L+ IIHRDLKPENIL L++D+ ++I DFG + L P + A G+
Sbjct: 120 VSALEYLHGKGIIHRDLKPENIL---LNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 176
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNN---VQLIVP-------ALH 182
Y++PE+L + + D+W++G I+++L+ G PPF N Q I+
Sbjct: 177 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF 236
Query: 183 PDCVDMCLKLLSANTVDRLSFNE 205
P D+ KLL + RL E
Sbjct: 237 PKARDLVEKLLVLDATKRLGCEE 259
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 107 bits (266), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 104/203 (51%), Gaps = 16/203 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E + +S ++HP ++L+ FQ + ++ + + G L YIR G E R + ++
Sbjct: 80 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 139
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY---AEKVCGSP 132
+ LE L+ IIHRDLKPENIL L++D+ ++I DFG + L P + A G+
Sbjct: 140 VSALEYLHGKGIIHRDLKPENIL---LNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 196
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNN---VQLIVP-------ALH 182
Y++PE+L + + D+W++G I+++L+ G PPF N Q I+
Sbjct: 197 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF 256
Query: 183 PDCVDMCLKLLSANTVDRLSFNE 205
P D+ KLL + RL E
Sbjct: 257 PKARDLVEKLLVLDATKRLGCEE 279
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 107 bits (266), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 104/203 (51%), Gaps = 16/203 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E + +S ++HP ++L+ FQ + ++ + + G L YIR G E R + ++
Sbjct: 59 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 118
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY---AEKVCGSP 132
+ LE L+ IIHRDLKPENIL L++D+ ++I DFG + L P + A G+
Sbjct: 119 VSALEYLHGKGIIHRDLKPENIL---LNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 175
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNN---VQLIVP-------ALH 182
Y++PE+L + + D+W++G I+++L+ G PPF N Q I+
Sbjct: 176 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF 235
Query: 183 PDCVDMCLKLLSANTVDRLSFNE 205
P D+ KLL + RL E
Sbjct: 236 PKARDLVEKLLVLDATKRLGCEE 258
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 107 bits (266), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 104/203 (51%), Gaps = 16/203 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E + +S ++HP ++L+ FQ + ++ + + G L YIR G E R + ++
Sbjct: 80 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 139
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY---AEKVCGSP 132
+ LE L+ IIHRDLKPENIL L++D+ ++I DFG + L P + A G+
Sbjct: 140 VSALEYLHGKGIIHRDLKPENIL---LNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 196
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNN---VQLIVP-------ALH 182
Y++PE+L + + D+W++G I+++L+ G PPF N Q I+
Sbjct: 197 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF 256
Query: 183 PDCVDMCLKLLSANTVDRLSFNE 205
P D+ KLL + RL E
Sbjct: 257 PKARDLVEKLLVLDATKRLGCEE 279
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 107 bits (266), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 115/223 (51%), Gaps = 24/223 (10%)
Query: 15 CELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSS-YIRLHGRVPEQTARKFLQ 73
E++ L+S +HPNI++L DAF EN +++++EFCAGG + + + L + E + +
Sbjct: 56 VEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCK 115
Query: 74 QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSC--TLYPGNYAEKVCGS 131
Q L L+ + IIHRDLK NIL + LD D+ K+ADFG+S T + G+
Sbjct: 116 QTLDALNYLHDNKIIHRDLKAGNILFT-LDGDI--KLADFGVSAKNTRTXIQRRDSFIGT 172
Query: 132 PLYMAPEVLQFQR-----YDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV-------P 179
P +MAPEV+ + YD K D+WS+G L E+ PP N +++++ P
Sbjct: 173 PYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPP 232
Query: 180 AL------HPDCVDMCLKLLSANTVDRLSFNEFYHHRFLRRNS 216
L + D K L N R + ++ H F+ +S
Sbjct: 233 TLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDS 275
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 107 bits (266), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 104/203 (51%), Gaps = 16/203 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E + +S ++HP ++L+ FQ + ++ + + G L YIR G E R + ++
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 141
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY---AEKVCGSP 132
+ LE L+ IIHRDLKPENIL L++D+ ++I DFG + L P + A G+
Sbjct: 142 VSALEYLHGKGIIHRDLKPENIL---LNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 198
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNN---VQLIVP-------ALH 182
Y++PE+L + + D+W++G I+++L+ G PPF N Q I+
Sbjct: 199 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF 258
Query: 183 PDCVDMCLKLLSANTVDRLSFNE 205
P D+ KLL + RL E
Sbjct: 259 PKARDLVEKLLVLDATKRLGCEE 281
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 107 bits (266), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 104/203 (51%), Gaps = 16/203 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E + +S ++HP ++L+ FQ + ++ + + G L YIR G E R + ++
Sbjct: 83 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 142
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY---AEKVCGSP 132
+ LE L+ IIHRDLKPENIL L++D+ ++I DFG + L P + A G+
Sbjct: 143 VSALEYLHGKGIIHRDLKPENIL---LNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 199
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNN---VQLIVP-------ALH 182
Y++PE+L + + D+W++G I+++L+ G PPF N Q I+
Sbjct: 200 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF 259
Query: 183 PDCVDMCLKLLSANTVDRLSFNE 205
P D+ KLL + RL E
Sbjct: 260 PKARDLVEKLLVLDATKRLGCEE 282
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 106 bits (265), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 103/203 (50%), Gaps = 16/203 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E + +S ++HP ++L+ FQ + ++ + + G L YIR G E R + ++
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 141
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY---AEKVCGSP 132
+ LE L+ IIHRDLKPENIL L++D+ ++I DFG + L P + A G+
Sbjct: 142 VSALEYLHGKGIIHRDLKPENIL---LNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 198
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIVPALH---------- 182
Y++PE+L + + D+W++G I+++L+ G PPF N + +
Sbjct: 199 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFF 258
Query: 183 PDCVDMCLKLLSANTVDRLSFNE 205
P D+ KLL + RL E
Sbjct: 259 PKARDLVEKLLVLDATKRLGCEE 281
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 106 bits (264), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 112/231 (48%), Gaps = 15/231 (6%)
Query: 3 KKLNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGR 62
KKL+ L+ E + H NI+RL D+ E +LV + GG L I
Sbjct: 40 KKLSARDHQKLEREARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREY 99
Query: 63 VPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPG 122
E A +QQ+ + + ++HRDLKPEN+LL+ +K+ADFGL+ +
Sbjct: 100 YSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGD 159
Query: 123 NYAE-KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI---- 177
A G+P Y++PEVL+ + Y + VD+W+ G IL+ LL GYPPF + +L
Sbjct: 160 QQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIK 219
Query: 178 ----------VPALHPDCVDMCLKLLSANTVDRLSFNEFYHHRFLRRNSAI 218
+ P+ ++ ++L+ N R++ +E H ++ + S +
Sbjct: 220 AGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRITAHEALKHPWVCQRSTV 270
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 106 bits (264), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 104/203 (51%), Gaps = 16/203 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E + +S ++HP ++L+ FQ + ++ + + G L YIR G E R + ++
Sbjct: 87 ERDVMSRLDHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 146
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY---AEKVCGSP 132
+ LE L+ IIHRDLKPENIL L++D+ ++I DFG + L P + A G+
Sbjct: 147 VSALEYLHGKGIIHRDLKPENIL---LNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 203
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNN---VQLIVP-------ALH 182
Y++PE+L + + D+W++G I+++L+ G PPF N Q I+
Sbjct: 204 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF 263
Query: 183 PDCVDMCLKLLSANTVDRLSFNE 205
P D+ KLL + RL E
Sbjct: 264 PKARDLVEKLLVLDATKRLGCEE 286
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 106 bits (264), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 96/169 (56%), Gaps = 5/169 (2%)
Query: 11 SCLDCELNFLS-SVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
C E LS + HP + +F FQ + +F V+E+ GG+L +I+ + A
Sbjct: 63 ECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRAT 122
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN-YAEKV 128
+ ++ GL+ L+S I++RDLK +NILL D D +KIADFG+ G+ +
Sbjct: 123 FYAAEIILGLQFLHSKGIVYRDLKLDNILL---DKDGHIKIADFGMCKENMLGDAKTNEF 179
Query: 129 CGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI 177
CG+P Y+APE+L Q+Y+ VD WS G +L+E+L G PF G++ +L
Sbjct: 180 CGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELF 228
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 97/169 (57%), Gaps = 2/169 (1%)
Query: 10 KSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNL-SSYIRLHGRVPEQTA 68
K + E++ ++ ++H N+I+L+DAF+++N I LV+E+ GG L I + E
Sbjct: 130 KEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDT 189
Query: 69 RKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKV 128
F++Q+ G+ ++ +I+H DLKPENIL D +KI DFGL+ P +
Sbjct: 190 ILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAK-QIKIIDFGLARRYKPREKLKVN 248
Query: 129 CGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI 177
G+P ++APEV+ + DMWSVG I + LL+G PF G N+ + +
Sbjct: 249 FGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETL 297
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 114/222 (51%), Gaps = 23/222 (10%)
Query: 15 CELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSS-YIRLHGRVPEQTARKFLQ 73
E++ L+S +HPNI++L DAF EN +++++EFCAGG + + + L + E + +
Sbjct: 83 VEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCK 142
Query: 74 QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSC-TLYPGNYAEKVCGSP 132
Q L L+ + IIHRDLK NIL + LD D+ K+ADFG+S + G+P
Sbjct: 143 QTLDALNYLHDNKIIHRDLKAGNILFT-LDGDI--KLADFGVSAKNTRTIQRRDSFIGTP 199
Query: 133 LYMAPEVLQFQR-----YDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV-------PA 180
+MAPEV+ + YD K D+WS+G L E+ PP N +++++ P
Sbjct: 200 YWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPT 259
Query: 181 L------HPDCVDMCLKLLSANTVDRLSFNEFYHHRFLRRNS 216
L + D K L N R + ++ H F+ +S
Sbjct: 260 LAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDS 301
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 105 bits (262), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 95/169 (56%), Gaps = 5/169 (2%)
Query: 11 SCLDCELNFLS-SVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
C E LS + HP + +F FQ + +F V+E+ GG+L +I+ + A
Sbjct: 62 ECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRAT 121
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN-YAEKV 128
+ ++ GL+ L+S I++RDLK +NILL D D +KIADFG+ G+
Sbjct: 122 FYAAEIILGLQFLHSKGIVYRDLKLDNILL---DKDGHIKIADFGMCKENMLGDAKTNXF 178
Query: 129 CGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI 177
CG+P Y+APE+L Q+Y+ VD WS G +L+E+L G PF G++ +L
Sbjct: 179 CGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELF 227
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 105 bits (262), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 114/222 (51%), Gaps = 23/222 (10%)
Query: 15 CELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSS-YIRLHGRVPEQTARKFLQ 73
E++ L+S +HPNI++L DAF EN +++++EFCAGG + + + L + E + +
Sbjct: 83 VEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCK 142
Query: 74 QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSC-TLYPGNYAEKVCGSP 132
Q L L+ + IIHRDLK NIL + LD D+ K+ADFG+S + G+P
Sbjct: 143 QTLDALNYLHDNKIIHRDLKAGNILFT-LDGDI--KLADFGVSAKNTRXIQRRDSFIGTP 199
Query: 133 LYMAPEVLQFQR-----YDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV-------PA 180
+MAPEV+ + YD K D+WS+G L E+ PP N +++++ P
Sbjct: 200 YWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPT 259
Query: 181 L------HPDCVDMCLKLLSANTVDRLSFNEFYHHRFLRRNS 216
L + D K L N R + ++ H F+ +S
Sbjct: 260 LAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDS 301
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 105 bits (261), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 114/222 (51%), Gaps = 23/222 (10%)
Query: 15 CELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSS-YIRLHGRVPEQTARKFLQ 73
E++ L+S +HPNI++L DAF EN +++++EFCAGG + + + L + E + +
Sbjct: 83 VEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCK 142
Query: 74 QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSC-TLYPGNYAEKVCGSP 132
Q L L+ + IIHRDLK NIL + LD D+ K+ADFG+S + G+P
Sbjct: 143 QTLDALNYLHDNKIIHRDLKAGNILFT-LDGDI--KLADFGVSAKNTRXIQRRDXFIGTP 199
Query: 133 LYMAPEVLQFQR-----YDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV-------PA 180
+MAPEV+ + YD K D+WS+G L E+ PP N +++++ P
Sbjct: 200 YWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPT 259
Query: 181 L------HPDCVDMCLKLLSANTVDRLSFNEFYHHRFLRRNS 216
L + D K L N R + ++ H F+ +S
Sbjct: 260 LAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDS 301
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 104 bits (259), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 105/224 (46%), Gaps = 22/224 (9%)
Query: 25 HPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNS 84
HPNI++L + F + FLV+E GG L I+ E A +++L + + ++
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHD 124
Query: 85 HHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKV-CGSPLYMAPEVLQFQ 143
++HRDLKPEN+L + +D++ +KI DFG + P N K C + Y APE+L
Sbjct: 125 VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQN 184
Query: 144 RYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIVPALH--------------------- 182
YDE D+WS+G IL+ +L+G PF + A+
Sbjct: 185 GYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVS 244
Query: 183 PDCVDMCLKLLSANTVDRLSFNEFYHHRFLRRNSAILRAPFHIP 226
+ D+ LL+ + RL + ++ +L+ S + P P
Sbjct: 245 QEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSNPLMTP 288
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 103 bits (257), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 94/171 (54%), Gaps = 13/171 (7%)
Query: 9 LKSCLDCELNFLSSV------NHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGR 62
+K +DC N + NH N+++ + + N +L +E+C+GG L I
Sbjct: 40 MKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG 99
Query: 63 VPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPG 122
+PE A++F QL AG+ L+ I HRD+KPEN+LL D+ LKI+DFGL+
Sbjct: 100 MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN---LKISDFGLATVFRYN 156
Query: 123 NYAE---KVCGSPLYMAPEVLQFQRY-DEKVDMWSVGAILFELLNGYPPFS 169
N K+CG+ Y+APE+L+ + + E VD+WS G +L +L G P+
Sbjct: 157 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 207
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 103 bits (257), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 94/171 (54%), Gaps = 13/171 (7%)
Query: 9 LKSCLDCELNFLSSV------NHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGR 62
+K +DC N + NH N+++ + + N +L +E+C+GG L I
Sbjct: 41 MKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG 100
Query: 63 VPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPG 122
+PE A++F QL AG+ L+ I HRD+KPEN+LL D+ LKI+DFGL+
Sbjct: 101 MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN---LKISDFGLATVFRYN 157
Query: 123 NYAE---KVCGSPLYMAPEVLQFQRY-DEKVDMWSVGAILFELLNGYPPFS 169
N K+CG+ Y+APE+L+ + + E VD+WS G +L +L G P+
Sbjct: 158 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 103 bits (257), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 94/171 (54%), Gaps = 13/171 (7%)
Query: 9 LKSCLDCELNFLSSV------NHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGR 62
+K +DC N + NH N+++ + + N +L +E+C+GG L I
Sbjct: 41 MKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG 100
Query: 63 VPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPG 122
+PE A++F QL AG+ L+ I HRD+KPEN+LL D+ LKI+DFGL+
Sbjct: 101 MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN---LKISDFGLATVFRYN 157
Query: 123 NYAE---KVCGSPLYMAPEVLQFQRY-DEKVDMWSVGAILFELLNGYPPFS 169
N K+CG+ Y+APE+L+ + + E VD+WS G +L +L G P+
Sbjct: 158 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 103 bits (257), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 94/171 (54%), Gaps = 13/171 (7%)
Query: 9 LKSCLDCELNFLSSV------NHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGR 62
+K +DC N + NH N+++ + + N +L +E+C+GG L I
Sbjct: 41 MKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG 100
Query: 63 VPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPG 122
+PE A++F QL AG+ L+ I HRD+KPEN+LL D+ LKI+DFGL+
Sbjct: 101 MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN---LKISDFGLATVFRYN 157
Query: 123 NYAE---KVCGSPLYMAPEVLQFQRY-DEKVDMWSVGAILFELLNGYPPFS 169
N K+CG+ Y+APE+L+ + + E VD+WS G +L +L G P+
Sbjct: 158 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 103 bits (257), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 94/171 (54%), Gaps = 13/171 (7%)
Query: 9 LKSCLDCELNFLSSV------NHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGR 62
+K +DC N + NH N+++ + + N +L +E+C+GG L I
Sbjct: 42 MKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG 101
Query: 63 VPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPG 122
+PE A++F QL AG+ L+ I HRD+KPEN+LL D+ LKI+DFGL+
Sbjct: 102 MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN---LKISDFGLATVFRYN 158
Query: 123 NYAE---KVCGSPLYMAPEVLQFQRY-DEKVDMWSVGAILFELLNGYPPFS 169
N K+CG+ Y+APE+L+ + + E VD+WS G +L +L G P+
Sbjct: 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 103 bits (257), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 94/171 (54%), Gaps = 13/171 (7%)
Query: 9 LKSCLDCELNFLSSV------NHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGR 62
+K +DC N + NH N+++ + + N +L +E+C+GG L I
Sbjct: 42 MKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG 101
Query: 63 VPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPG 122
+PE A++F QL AG+ L+ I HRD+KPEN+LL D+ LKI+DFGL+
Sbjct: 102 MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN---LKISDFGLATVFRYN 158
Query: 123 NYAE---KVCGSPLYMAPEVLQFQRY-DEKVDMWSVGAILFELLNGYPPFS 169
N K+CG+ Y+APE+L+ + + E VD+WS G +L +L G P+
Sbjct: 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 103 bits (257), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 94/171 (54%), Gaps = 13/171 (7%)
Query: 9 LKSCLDCELNFLSSV------NHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGR 62
+K +DC N + NH N+++ + + N +L +E+C+GG L I
Sbjct: 41 MKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG 100
Query: 63 VPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPG 122
+PE A++F QL AG+ L+ I HRD+KPEN+LL D+ LKI+DFGL+
Sbjct: 101 MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN---LKISDFGLATVFRYN 157
Query: 123 NYAE---KVCGSPLYMAPEVLQFQRY-DEKVDMWSVGAILFELLNGYPPFS 169
N K+CG+ Y+APE+L+ + + E VD+WS G +L +L G P+
Sbjct: 158 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 103 bits (257), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 94/171 (54%), Gaps = 13/171 (7%)
Query: 9 LKSCLDCELNFLSSV------NHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGR 62
+K +DC N + NH N+++ + + N +L +E+C+GG L I
Sbjct: 42 MKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG 101
Query: 63 VPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPG 122
+PE A++F QL AG+ L+ I HRD+KPEN+LL D+ LKI+DFGL+
Sbjct: 102 MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN---LKISDFGLATVFRYN 158
Query: 123 NYAE---KVCGSPLYMAPEVLQFQRY-DEKVDMWSVGAILFELLNGYPPFS 169
N K+CG+ Y+APE+L+ + + E VD+WS G +L +L G P+
Sbjct: 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 103 bits (257), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 94/171 (54%), Gaps = 13/171 (7%)
Query: 9 LKSCLDCELNFLSSV------NHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGR 62
+K +DC N + NH N+++ + + N +L +E+C+GG L I
Sbjct: 42 MKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG 101
Query: 63 VPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPG 122
+PE A++F QL AG+ L+ I HRD+KPEN+LL D+ LKI+DFGL+
Sbjct: 102 MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN---LKISDFGLATVFRYN 158
Query: 123 NYAE---KVCGSPLYMAPEVLQFQRY-DEKVDMWSVGAILFELLNGYPPFS 169
N K+CG+ Y+APE+L+ + + E VD+WS G +L +L G P+
Sbjct: 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 103 bits (257), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 94/171 (54%), Gaps = 13/171 (7%)
Query: 9 LKSCLDCELNFLSSV------NHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGR 62
+K +DC N + NH N+++ + + N +L +E+C+GG L I
Sbjct: 42 MKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG 101
Query: 63 VPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPG 122
+PE A++F QL AG+ L+ I HRD+KPEN+LL D+ LKI+DFGL+
Sbjct: 102 MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN---LKISDFGLATVFRYN 158
Query: 123 NYAE---KVCGSPLYMAPEVLQFQRY-DEKVDMWSVGAILFELLNGYPPFS 169
N K+CG+ Y+APE+L+ + + E VD+WS G +L +L G P+
Sbjct: 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 103 bits (256), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 94/171 (54%), Gaps = 13/171 (7%)
Query: 9 LKSCLDCELNFLSSV------NHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGR 62
+K +DC N + NH N+++ + + N +L +E+C+GG L I
Sbjct: 41 MKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG 100
Query: 63 VPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPG 122
+PE A++F QL AG+ L+ I HRD+KPEN+LL D+ LKI+DFGL+
Sbjct: 101 MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN---LKISDFGLATVFRYN 157
Query: 123 NYAE---KVCGSPLYMAPEVLQFQRY-DEKVDMWSVGAILFELLNGYPPFS 169
N K+CG+ Y+APE+L+ + + E VD+WS G +L +L G P+
Sbjct: 158 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 103 bits (256), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 94/171 (54%), Gaps = 13/171 (7%)
Query: 9 LKSCLDCELNFLSSV------NHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGR 62
+K +DC N + NH N+++ + + N +L +E+C+GG L I
Sbjct: 42 MKRAVDCPENIKKEICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG 101
Query: 63 VPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPG 122
+PE A++F QL AG+ L+ I HRD+KPEN+LL D+ LKI+DFGL+
Sbjct: 102 MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN---LKISDFGLATVFRYN 158
Query: 123 NYAE---KVCGSPLYMAPEVLQFQRY-DEKVDMWSVGAILFELLNGYPPFS 169
N K+CG+ Y+APE+L+ + + E VD+WS G +L +L G P+
Sbjct: 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 103 bits (256), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 94/170 (55%), Gaps = 13/170 (7%)
Query: 9 LKSCLDCELNFLSSV------NHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGR 62
+K +DC N + NH N+++ + + N +L +E+C+GG L I
Sbjct: 42 MKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG 101
Query: 63 VPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPG 122
+PE A++F QL AG+ L+ I HRD+KPEN+LL D+ LKI+DFGL+
Sbjct: 102 MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN---LKISDFGLATVFRYN 158
Query: 123 NYAE---KVCGSPLYMAPEVLQFQRY-DEKVDMWSVGAILFELLNGYPPF 168
N K+CG+ Y+APE+L+ + + E VD+WS G +L +L G P+
Sbjct: 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 94/170 (55%), Gaps = 13/170 (7%)
Query: 9 LKSCLDCELNFLSSV------NHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGR 62
+K +DC N + NH N+++ + + N +L +E+C+GG L I
Sbjct: 41 MKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG 100
Query: 63 VPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPG 122
+PE A++F QL AG+ L+ I HRD+KPEN+LL D+ LKI+DFGL+
Sbjct: 101 MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN---LKISDFGLATVFRYN 157
Query: 123 NYAE---KVCGSPLYMAPEVLQFQRY-DEKVDMWSVGAILFELLNGYPPF 168
N K+CG+ Y+APE+L+ + + E VD+WS G +L +L G P+
Sbjct: 158 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 94/171 (54%), Gaps = 13/171 (7%)
Query: 9 LKSCLDCELNFLSSV------NHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGR 62
+K +DC N + NH N+++ + + N +L +E+C+GG L I
Sbjct: 41 MKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG 100
Query: 63 VPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPG 122
+PE A++F QL AG+ L+ I HRD+KPEN+LL D+ LKI+DFGL+
Sbjct: 101 MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN---LKISDFGLATVFRYN 157
Query: 123 NYAE---KVCGSPLYMAPEVLQFQRY-DEKVDMWSVGAILFELLNGYPPFS 169
N K+CG+ Y+APE+L+ + + E VD+WS G +L +L G P+
Sbjct: 158 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 94/171 (54%), Gaps = 13/171 (7%)
Query: 9 LKSCLDCELNFLSSV------NHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGR 62
+K +DC N + NH N+++ + + N +L +E+C+GG L I
Sbjct: 41 MKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG 100
Query: 63 VPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPG 122
+PE A++F QL AG+ L+ I HRD+KPEN+LL D+ LKI+DFGL+
Sbjct: 101 MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN---LKISDFGLATVFRYN 157
Query: 123 NYAE---KVCGSPLYMAPEVLQFQRY-DEKVDMWSVGAILFELLNGYPPFS 169
N K+CG+ Y+APE+L+ + + E VD+WS G +L +L G P+
Sbjct: 158 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 102 bits (253), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 95/168 (56%), Gaps = 10/168 (5%)
Query: 10 KSCLDC--ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGR----V 63
K+ DC E++ L +NHPN+I+ + +F +N + +V+E G+LS I+ + +
Sbjct: 74 KARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLI 133
Query: 64 PEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN 123
PE+T K+ QL + LE ++S ++HRD+KP N+ ++ ++K+ D GL
Sbjct: 134 PERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATG---VVKLGDLGLGRFFSSKT 190
Query: 124 YA-EKVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSG 170
A + G+P YM+PE + Y+ K D+WS+G +L+E+ PF G
Sbjct: 191 TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYG 238
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 102 bits (253), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 116/233 (49%), Gaps = 23/233 (9%)
Query: 3 KKLNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQA----ENCIFLVVEFCAGGNLSSYIR 58
+KL K + E L + HPNI+R +D++++ + CI LV E G L +Y++
Sbjct: 62 RKLTKSERQRFKEEAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLK 121
Query: 59 LHGRVPEQTARKFLQQLGAGLEILNSHH--IIHRDLKPENILLSGLDDDVMLKIADFGLS 116
+ R + +Q+ GL+ L++ IIHRDLK +NI ++G V KI D GL+
Sbjct: 122 RFKVXKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSV--KIGDLGLA 179
Query: 117 CTLYPGNYAEKVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSG-RNNVQ 175
TL ++A+ V G+P + APE + ++YDE VD+++ G E P+S +N Q
Sbjct: 180 -TLKRASFAKAVIGTPEFXAPEXYE-EKYDESVDVYAFGXCXLEXATSEYPYSECQNAAQ 237
Query: 176 L-------IVPALH-----PDCVDMCLKLLSANTVDRLSFNEFYHHRFLRRNS 216
+ + PA P+ ++ + N +R S + +H F + +
Sbjct: 238 IYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQEET 290
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 102 bits (253), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 113/218 (51%), Gaps = 30/218 (13%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTA---RKFL 72
E+ + +PNI+ D++ + +++V+E+ AGG+L+ + Q A R+ L
Sbjct: 68 EILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL 127
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEK-VCGS 131
Q LE L+S+ +IHRD+K +NILL G+D V K+ DFG + P + G+
Sbjct: 128 Q----ALEFLHSNQVIHRDIKSDNILL-GMDGSV--KLTDFGFCAQITPEQSKRSXMVGT 180
Query: 132 PLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI-------------- 177
P +MAPEV+ + Y KVD+WS+G + E++ G PP+ N ++ +
Sbjct: 181 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP 240
Query: 178 --VPALHPDCVDMCLKLLSANTVDRLSFNEFYHHRFLR 213
+ A+ D ++ CL++ + R S E H+FL+
Sbjct: 241 EKLSAIFRDFLNRCLEM---DVEKRGSAKELIQHQFLK 275
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 113/218 (51%), Gaps = 30/218 (13%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTA---RKFL 72
E+ + +PNI+ D++ + +++V+E+ AGG+L+ + Q A R+ L
Sbjct: 67 EILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL 126
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEK-VCGS 131
Q LE L+S+ +IHRD+K +NILL G+D V K+ DFG + P + G+
Sbjct: 127 Q----ALEFLHSNQVIHRDIKSDNILL-GMDGSV--KLTDFGFCAQITPEQSKRSXMVGT 179
Query: 132 PLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI-------------- 177
P +MAPEV+ + Y KVD+WS+G + E++ G PP+ N ++ +
Sbjct: 180 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP 239
Query: 178 --VPALHPDCVDMCLKLLSANTVDRLSFNEFYHHRFLR 213
+ A+ D ++ CL++ + R S E H+FL+
Sbjct: 240 EKLSAIFRDFLNRCLEM---DVEKRGSAKELLQHQFLK 274
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 88/160 (55%), Gaps = 13/160 (8%)
Query: 24 NHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQLGAGLEILN 83
+ NI+ L + F+ + +LV E GG++ ++I+ E+ A + ++ + A L+ L+
Sbjct: 69 GNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLH 128
Query: 84 SHHIIHRDLKPENILLSGLDDDVMLKIADFGL--------SCTLYPGNYAEKVCGSPLYM 135
+ I HRDLKPENIL + +KI DF L SCT CGS YM
Sbjct: 129 TKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYM 188
Query: 136 APEVL-----QFQRYDEKVDMWSVGAILFELLNGYPPFSG 170
APEV+ Q YD++ D+WS+G +L+ +L+GYPPF G
Sbjct: 189 APEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVG 228
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 113/218 (51%), Gaps = 30/218 (13%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTA---RKFL 72
E+ + +PNI+ D++ + +++V+E+ AGG+L+ + Q A R+ L
Sbjct: 67 EILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL 126
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYA-EKVCGS 131
Q LE L+S+ +IHRD+K +NILL G+D V K+ DFG + P ++ G+
Sbjct: 127 Q----ALEFLHSNQVIHRDIKSDNILL-GMDGSV--KLTDFGFCAQITPEQSKRSEMVGT 179
Query: 132 PLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI-------------- 177
P +MAPEV+ + Y KVD+WS+G + E++ G PP+ N ++ +
Sbjct: 180 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP 239
Query: 178 --VPALHPDCVDMCLKLLSANTVDRLSFNEFYHHRFLR 213
+ A+ D ++ CL + + R S E H+FL+
Sbjct: 240 EKLSAIFRDFLNRCLDM---DVEKRGSAKELLQHQFLK 274
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 114/235 (48%), Gaps = 30/235 (12%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRV--PEQTARKFLQ 73
E L VN ++ L A++ ++ + LV+ GG+L +I G+ PE A +
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAA 293
Query: 74 QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPL 133
++ GLE L+ I++RDLKPENILL DD ++I+D GL+ + G + G+
Sbjct: 294 EICCGLEDLHRERIVYRDLKPENILL---DDHGHIRISDLGLAVHVPEGQTIKGRVGTVG 350
Query: 134 YMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFS------GRNNVQLIVPAL------ 181
YMAPEV++ +RY D W++G +L+E++ G PF R V+ +V +
Sbjct: 351 YMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSE 410
Query: 182 --HPDCVDMCLKLLSANTVDRL-----SFNEFYHH------RFLRRNSAILRAPF 223
P +C +LL + +RL S E H F R + +L PF
Sbjct: 411 RFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPF 465
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 114/235 (48%), Gaps = 30/235 (12%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRV--PEQTARKFLQ 73
E L VN ++ L A++ ++ + LV+ GG+L +I G+ PE A +
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAA 293
Query: 74 QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPL 133
++ GLE L+ I++RDLKPENILL DD ++I+D GL+ + G + G+
Sbjct: 294 EICCGLEDLHRERIVYRDLKPENILL---DDHGHIRISDLGLAVHVPEGQTIKGRVGTVG 350
Query: 134 YMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFS------GRNNVQLIVPAL------ 181
YMAPEV++ +RY D W++G +L+E++ G PF R V+ +V +
Sbjct: 351 YMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSE 410
Query: 182 --HPDCVDMCLKLLSANTVDRL-----SFNEFYHH------RFLRRNSAILRAPF 223
P +C +LL + +RL S E H F R + +L PF
Sbjct: 411 RFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPF 465
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 101 bits (251), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 114/227 (50%), Gaps = 16/227 (7%)
Query: 10 KSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHG-RVPEQTA 68
K + E++ ++ ++HP +I L DAF+ + + L++EF +GG L I ++ E
Sbjct: 92 KYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEV 151
Query: 69 RKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKV 128
+++Q GL+ ++ H I+H D+KPENI+ +KI DFGL+ L P +
Sbjct: 152 INYMRQACEGLKHMHEHSIVHLDIKPENIMCE-TKKASSVKIIDFGLATKLNPDEIVKVT 210
Query: 129 CGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI----------- 177
+ + APE++ + DMW++G + + LL+G PF+G ++++ +
Sbjct: 211 TATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFD 270
Query: 178 ---VPALHPDCVDMCLKLLSANTVDRLSFNEFYHHRFLRRNSAILRA 221
++ P+ D LL RL+ ++ H +L+ + + L +
Sbjct: 271 EDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHSNLTS 317
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 101 bits (251), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 112/218 (51%), Gaps = 30/218 (13%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTA---RKFL 72
E+ + +PNI+ D++ + +++V+E+ AGG+L+ + Q A R+ L
Sbjct: 67 EILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL 126
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEK-VCGS 131
Q LE L+S+ +IHRD+K +NILL G+D V K+ DFG + P + G+
Sbjct: 127 Q----ALEFLHSNQVIHRDIKSDNILL-GMDGSV--KLTDFGFCAQITPEQSKRSTMVGT 179
Query: 132 PLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI-------------- 177
P +MAPEV+ + Y KVD+WS+G + E++ G PP+ N ++ +
Sbjct: 180 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP 239
Query: 178 --VPALHPDCVDMCLKLLSANTVDRLSFNEFYHHRFLR 213
+ A+ D ++ CL + + R S E H+FL+
Sbjct: 240 EKLSAIFRDFLNRCLDM---DVEKRGSAKELLQHQFLK 274
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 100 bits (248), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 113/218 (51%), Gaps = 30/218 (13%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTA---RKFL 72
E+ + +PNI+ D++ + +++V+E+ AGG+L+ + Q A R+ L
Sbjct: 68 EILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL 127
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEK-VCGS 131
Q LE L+S+ +IHR++K +NILL G+D V K+ DFG + P + G+
Sbjct: 128 Q----ALEFLHSNQVIHRNIKSDNILL-GMDGSV--KLTDFGFCAQITPEQSKRSTMVGT 180
Query: 132 PLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI-------------- 177
P +MAPEV+ + Y KVD+WS+G + E++ G PP+ N ++ +
Sbjct: 181 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP 240
Query: 178 --VPALHPDCVDMCLKLLSANTVDRLSFNEFYHHRFLR 213
+ A+ D ++ CL++ + R S E H+FL+
Sbjct: 241 EKLSAIFRDFLNRCLEM---DVEKRGSAKELIQHQFLK 275
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 93/171 (54%), Gaps = 13/171 (7%)
Query: 9 LKSCLDCELNFLSSV------NHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGR 62
+K +DC N + NH N+++ + + N +L +E+C+GG L I
Sbjct: 41 MKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG 100
Query: 63 VPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPG 122
+PE A++F QL AG+ L+ I HRD+KPEN+LL D+ LKI+DFGL+
Sbjct: 101 MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN---LKISDFGLATVFRYN 157
Query: 123 NYAE---KVCGSPLYMAPEVLQFQRY-DEKVDMWSVGAILFELLNGYPPFS 169
N K+ G+ Y+APE+L+ + + E VD+WS G +L +L G P+
Sbjct: 158 NRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 93/171 (54%), Gaps = 13/171 (7%)
Query: 9 LKSCLDCELNFLSSV------NHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGR 62
+K +DC N + NH N+++ + + N +L +E+C+GG L I
Sbjct: 41 MKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG 100
Query: 63 VPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPG 122
+PE A++F QL AG+ L+ I HRD+KPEN+LL D+ LKI+DFGL+
Sbjct: 101 MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN---LKISDFGLATVFRYN 157
Query: 123 NYAE---KVCGSPLYMAPEVLQFQRY-DEKVDMWSVGAILFELLNGYPPFS 169
N K+ G+ Y+APE+L+ + + E VD+WS G +L +L G P+
Sbjct: 158 NRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 124/248 (50%), Gaps = 48/248 (19%)
Query: 2 LKKLNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQ----AENCIFLVVEFCAGGNLSSYI 57
LK L K+ + EL++ +S P+I+R+ D ++ C+ +V+E GG L S I
Sbjct: 48 LKMLQDCPKARREVELHWRAS-QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRI 106
Query: 58 RLHG--RVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGL 115
+ G E+ A + ++ +G ++ L+S +I HRD+KPEN+L + + +LK+ DFG
Sbjct: 107 QDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFG- 165
Query: 116 SCTLYPGNYAEKVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQ 175
+A++ G ++YD+ DMWS+G I++ LL GYPPF N+
Sbjct: 166 --------FAKETTG------------EKYDKSCDMWSLGVIMYILLCGYPPFYS-NHGL 204
Query: 176 LIVPAL------------HPDC------VDMCLK-LLSANTVDRLSFNEFYHHRFLRRNS 216
I P + +P+ V M ++ LL R++ EF +H ++ +++
Sbjct: 205 AISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 264
Query: 217 AILRAPFH 224
+ + P H
Sbjct: 265 KVPQTPLH 272
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 93/171 (54%), Gaps = 13/171 (7%)
Query: 9 LKSCLDCELNFLSSV------NHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGR 62
+K +DC N + NH N+++ + + N +L +E+C+GG L I
Sbjct: 42 MKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG 101
Query: 63 VPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPG 122
+PE A++F QL AG+ L+ I HRD+KPEN+LL D+ LKI+DFGL+
Sbjct: 102 MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN---LKISDFGLATVFRYN 158
Query: 123 NYAE---KVCGSPLYMAPEVLQFQRY-DEKVDMWSVGAILFELLNGYPPFS 169
N K+ G+ Y+APE+L+ + + E VD+WS G +L +L G P+
Sbjct: 159 NRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 103/214 (48%), Gaps = 19/214 (8%)
Query: 15 CELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQ 74
E L + HP + L AFQ + + V+E+ GG L ++ E+ AR + +
Sbjct: 57 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE 116
Query: 75 LGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGL-SCTLYPGNYAEKVCGSPL 133
+ + LE L+S +++RD+K EN++ LD D +KI DFGL + G + CG+P
Sbjct: 117 IVSALEYLHSRDVVYRDIKLENLM---LDKDGHIKITDFGLCKEGISDGATMKTFCGTPE 173
Query: 134 YMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV----------PALHP 183
Y+APEVL+ Y VD W +G +++E++ G PF +++ +L L P
Sbjct: 174 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSP 233
Query: 184 DCVDMCLKLLSANTVDRLS-----FNEFYHHRFL 212
+ + LL + RL E HRF
Sbjct: 234 EAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 267
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 111/219 (50%), Gaps = 18/219 (8%)
Query: 13 LDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRV----PEQTA 68
L E + + HP+I+ L + + ++ +++V EF G +L I E A
Sbjct: 73 LKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVA 132
Query: 69 RKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL-YPGNYAEK 127
+++Q+ L + ++IIHRD+KPEN+LL+ ++ +K+ DFG++ L G A
Sbjct: 133 SHYMRQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGG 192
Query: 128 VCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNN--VQLIVPA----- 180
G+P +MAPEV++ + Y + VD+W G ILF LL+G PF G + I+
Sbjct: 193 RVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMN 252
Query: 181 ------LHPDCVDMCLKLLSANTVDRLSFNEFYHHRFLR 213
+ D+ ++L + +R++ E +H +L+
Sbjct: 253 PRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLK 291
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 93/171 (54%), Gaps = 13/171 (7%)
Query: 9 LKSCLDCELNFLSSV------NHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGR 62
+K +DC N + NH N+++ + + N +L +E+C+GG L I
Sbjct: 41 MKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG 100
Query: 63 VPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPG 122
+PE A++F QL AG+ L+ I HRD+KPEN+LL D+ LKI+DFGL+
Sbjct: 101 MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN---LKISDFGLATVFRYN 157
Query: 123 NYAE---KVCGSPLYMAPEVLQFQRY-DEKVDMWSVGAILFELLNGYPPFS 169
N K+ G+ Y+APE+L+ + + E VD+WS G +L +L G P+
Sbjct: 158 NRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 93/171 (54%), Gaps = 13/171 (7%)
Query: 9 LKSCLDCELNFLSSV------NHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGR 62
+K +DC N + NH N+++ + + N +L +E+C+GG L I
Sbjct: 41 MKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG 100
Query: 63 VPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPG 122
+PE A++F QL AG+ L+ I HRD+KPEN+LL D+ LKI+DFGL+
Sbjct: 101 MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN---LKISDFGLATVFRYN 157
Query: 123 NYAE---KVCGSPLYMAPEVLQFQRY-DEKVDMWSVGAILFELLNGYPPFS 169
N K+ G+ Y+APE+L+ + + E VD+WS G +L +L G P+
Sbjct: 158 NRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 99.4 bits (246), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 103/214 (48%), Gaps = 19/214 (8%)
Query: 15 CELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQ 74
E L + HP + L AFQ + + V+E+ GG L ++ E+ AR + +
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE 113
Query: 75 LGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGL-SCTLYPGNYAEKVCGSPL 133
+ + LE L+S +++RD+K EN++ LD D +KI DFGL + G + CG+P
Sbjct: 114 IVSALEYLHSRDVVYRDIKLENLM---LDKDGHIKITDFGLCKEGISDGATMKTFCGTPE 170
Query: 134 YMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV----------PALHP 183
Y+APEVL+ Y VD W +G +++E++ G PF +++ +L L P
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSP 230
Query: 184 DCVDMCLKLLSANTVDRLS-----FNEFYHHRFL 212
+ + LL + RL E HRF
Sbjct: 231 EAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 99.4 bits (246), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 103/214 (48%), Gaps = 19/214 (8%)
Query: 15 CELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQ 74
E L + HP + L AFQ + + V+E+ GG L ++ E+ AR + +
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE 113
Query: 75 LGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGL-SCTLYPGNYAEKVCGSPL 133
+ + LE L+S +++RD+K EN++ LD D +KI DFGL + G + CG+P
Sbjct: 114 IVSALEYLHSRDVVYRDIKLENLM---LDKDGHIKITDFGLCKEGISDGATMKTFCGTPE 170
Query: 134 YMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV----------PALHP 183
Y+APEVL+ Y VD W +G +++E++ G PF +++ +L L P
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSP 230
Query: 184 DCVDMCLKLLSANTVDRLS-----FNEFYHHRFL 212
+ + LL + RL E HRF
Sbjct: 231 EAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 99.4 bits (246), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
EL + + HP ++ L+ +FQ E +F+VV+ GG+L +++ + E+T + F+ +L
Sbjct: 65 ELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICEL 124
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYM 135
L+ L + IIHRD+KP+NIL LD+ + I DF ++ L + G+ YM
Sbjct: 125 VMALDYLQNQRIIHRDMKPDNIL---LDEHGHVHITDFNIAAMLPRETQITTMAGTKPYM 181
Query: 136 APEVLQFQR---YDEKVDMWSVGAILFELLNGYPPFSGRNNVQ------------LIVP- 179
APE+ ++ Y VD WS+G +ELL G P+ R++ + P
Sbjct: 182 APEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPS 241
Query: 180 ALHPDCVDMCLKLLSANTVDRLS 202
A + V + KLL N R S
Sbjct: 242 AWSQEMVSLLKKLLEPNPDQRFS 264
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 99.4 bits (246), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 103/214 (48%), Gaps = 19/214 (8%)
Query: 15 CELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQ 74
E L + HP + L AFQ + + V+E+ GG L ++ E+ AR + +
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE 113
Query: 75 LGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGL-SCTLYPGNYAEKVCGSPL 133
+ + LE L+S +++RD+K EN++ LD D +KI DFGL + G + CG+P
Sbjct: 114 IVSALEYLHSRDVVYRDIKLENLM---LDKDGHIKITDFGLCKEGISDGATMKXFCGTPE 170
Query: 134 YMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV----------PALHP 183
Y+APEVL+ Y VD W +G +++E++ G PF +++ +L L P
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSP 230
Query: 184 DCVDMCLKLLSANTVDRLS-----FNEFYHHRFL 212
+ + LL + RL E HRF
Sbjct: 231 EAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 103/214 (48%), Gaps = 19/214 (8%)
Query: 15 CELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQ 74
E L + HP + L AFQ + + V+E+ GG L ++ E+ AR + +
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE 113
Query: 75 LGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGL-SCTLYPGNYAEKVCGSPL 133
+ + LE L+S +++RD+K EN++ LD D +KI DFGL + G + CG+P
Sbjct: 114 IVSALEYLHSRDVVYRDIKLENLM---LDKDGHIKITDFGLCKEGISDGATMKXFCGTPE 170
Query: 134 YMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV----------PALHP 183
Y+APEVL+ Y VD W +G +++E++ G PF +++ +L L P
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSP 230
Query: 184 DCVDMCLKLLSANTVDRLS-----FNEFYHHRFL 212
+ + LL + RL E HRF
Sbjct: 231 EAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 103/214 (48%), Gaps = 19/214 (8%)
Query: 15 CELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQ 74
E L + HP + L AFQ + + V+E+ GG L ++ E+ AR + +
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE 113
Query: 75 LGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGL-SCTLYPGNYAEKVCGSPL 133
+ + LE L+S +++RD+K EN++ LD D +KI DFGL + G + CG+P
Sbjct: 114 IVSALEYLHSRDVVYRDIKLENLM---LDKDGHIKITDFGLCKEGISDGATMKXFCGTPE 170
Query: 134 YMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV----------PALHP 183
Y+APEVL+ Y VD W +G +++E++ G PF +++ +L L P
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSP 230
Query: 184 DCVDMCLKLLSANTVDRLS-----FNEFYHHRFL 212
+ + LL + RL E HRF
Sbjct: 231 EAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 103/214 (48%), Gaps = 19/214 (8%)
Query: 15 CELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQ 74
E L + HP + L AFQ + + V+E+ GG L ++ E+ AR + +
Sbjct: 59 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE 118
Query: 75 LGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGL-SCTLYPGNYAEKVCGSPL 133
+ + LE L+S +++RD+K EN++ LD D +KI DFGL + G + CG+P
Sbjct: 119 IVSALEYLHSRDVVYRDIKLENLM---LDKDGHIKITDFGLCKEGISDGATMKXFCGTPE 175
Query: 134 YMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV----------PALHP 183
Y+APEVL+ Y VD W +G +++E++ G PF +++ +L L P
Sbjct: 176 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSP 235
Query: 184 DCVDMCLKLLSANTVDRLS-----FNEFYHHRFL 212
+ + LL + RL E HRF
Sbjct: 236 EAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 269
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 106/219 (48%), Gaps = 21/219 (9%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
EL L N P I+ + AF ++ I + +E GG+L ++ GR+PEQ K +
Sbjct: 73 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV 132
Query: 76 GAGLEIL-NSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLY 134
GL L H I+HRD+KP NIL++ + +K+ DFG+S L + A G+ Y
Sbjct: 133 IKGLTYLREKHKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLID-SMANSFVGTRSY 188
Query: 135 MAPEVLQFQRYDEKVDMWSVGAILFELLNG-YPPFSGRNNVQL------IV---PALHPD 184
M+PE LQ Y + D+WS+G L E+ G YP SG ++ + IV P P
Sbjct: 189 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPS 248
Query: 185 CV------DMCLKLLSANTVDRLSFNEFYHHRFLRRNSA 217
V D K L N +R + H F++R+ A
Sbjct: 249 GVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDA 287
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 97.8 bits (242), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 80/148 (54%), Gaps = 2/148 (1%)
Query: 24 NHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQLGAGLEILN 83
HPNII L D + ++LV E GG L I E+ A L +G +E L+
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLH 138
Query: 84 SHHIIHRDLKPENIL-LSGLDDDVMLKIADFGLSCTLYPGN-YAEKVCGSPLYMAPEVLQ 141
S ++HRDLKP NIL + + L+I DFG + L N C + ++APEVL+
Sbjct: 139 SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLK 198
Query: 142 FQRYDEKVDMWSVGAILFELLNGYPPFS 169
Q YDE D+WS+G +L+ +L GY PF+
Sbjct: 199 RQGYDEGCDIWSLGILLYTMLAGYTPFA 226
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 97.4 bits (241), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 80/148 (54%), Gaps = 2/148 (1%)
Query: 24 NHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQLGAGLEILN 83
HPNII L D + ++LV E GG L I E+ A L +G +E L+
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLH 138
Query: 84 SHHIIHRDLKPENIL-LSGLDDDVMLKIADFGLSCTLYPGN-YAEKVCGSPLYMAPEVLQ 141
S ++HRDLKP NIL + + L+I DFG + L N C + ++APEVL+
Sbjct: 139 SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLK 198
Query: 142 FQRYDEKVDMWSVGAILFELLNGYPPFS 169
Q YDE D+WS+G +L+ +L GY PF+
Sbjct: 199 RQGYDEGCDIWSLGILLYTMLAGYTPFA 226
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 97.4 bits (241), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 92/159 (57%), Gaps = 10/159 (6%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E + ++ N P +++LF AFQ + +++V+E+ GG+L + + + VPE+ AR + ++
Sbjct: 124 ERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD-VPEKWARFYTAEV 182
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYA--EKVCGSPL 133
L+ ++S IHRD+KP+N+L LD LK+ADFG + + G+P
Sbjct: 183 VLALDAIHSMGFIHRDVKPDNML---LDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPD 239
Query: 134 YMAPEVLQFQ----RYDEKVDMWSVGAILFELLNGYPPF 168
Y++PEVL+ Q Y + D WSVG L+E+L G PF
Sbjct: 240 YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 97.4 bits (241), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 92/159 (57%), Gaps = 10/159 (6%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E + ++ N P +++LF AFQ + +++V+E+ GG+L + + + VPE+ AR + ++
Sbjct: 124 ERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD-VPEKWARFYTAEV 182
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYA--EKVCGSPL 133
L+ ++S IHRD+KP+N+L LD LK+ADFG + + G+P
Sbjct: 183 VLALDAIHSMGFIHRDVKPDNML---LDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPD 239
Query: 134 YMAPEVLQFQ----RYDEKVDMWSVGAILFELLNGYPPF 168
Y++PEVL+ Q Y + D WSVG L+E+L G PF
Sbjct: 240 YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 97.4 bits (241), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 107/216 (49%), Gaps = 22/216 (10%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E+ LS + + + + ++ + +++++E+ GG+ +R G E L+++
Sbjct: 71 EITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRA-GPFDEFQIATMLKEI 129
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKV-CGSPLY 134
GL+ L+S IHRD+K N+LLS D +K+ADFG++ L G+P +
Sbjct: 130 LKGLDYLHSEKKIHRDIKAANVLLSEQGD---VKLADFGVAGQLTDTQIKRNTFVGTPFW 186
Query: 135 MAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRN--NVQLIVPALHP--------- 183
MAPEV+Q YD K D+WS+G EL G PP S + V ++P +P
Sbjct: 187 MAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLVGDFTK 246
Query: 184 ---DCVDMCLKLLSANTVDRLSFNEFYHHRFLRRNS 216
+ +D C L+ + R + E H+F+ +NS
Sbjct: 247 SFKEFIDAC---LNKDPSFRPTAKELLKHKFIVKNS 279
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 97.4 bits (241), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 92/159 (57%), Gaps = 10/159 (6%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E + ++ N P +++LF AFQ + +++V+E+ GG+L + + + VPE+ AR + ++
Sbjct: 119 ERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD-VPEKWARFYTAEV 177
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYA--EKVCGSPL 133
L+ ++S IHRD+KP+N+L LD LK+ADFG + + G+P
Sbjct: 178 VLALDAIHSMGFIHRDVKPDNML---LDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPD 234
Query: 134 YMAPEVLQFQ----RYDEKVDMWSVGAILFELLNGYPPF 168
Y++PEVL+ Q Y + D WSVG L+E+L G PF
Sbjct: 235 YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 273
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 108/220 (49%), Gaps = 31/220 (14%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E+ FL + HPN I+ + E+ +LV+E+C G + S + +H + P Q
Sbjct: 104 EVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLG-SASDLLEVHKK-PLQEVEIAAVTH 161
Query: 76 GA--GLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPL 133
GA GL L+SH++IHRD+K NILLS + ++K+ DFG + + P N G+P
Sbjct: 162 GALQGLAYLHSHNMIHRDVKAGNILLS---EPGLVKLGDFGSASIMAPAN---XFVGTPY 215
Query: 134 YMAPEV---LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV-------PALHP 183
+MAPEV + +YD KVD+WS+G EL PP N + + PAL
Sbjct: 216 WMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQS 275
Query: 184 --------DCVDMCLKLLSANTVDRLSFNEFYHHRFLRRN 215
+ VD CL+ + DR + HRF+ R
Sbjct: 276 GHWSEYFRNFVDSCLQKIPQ---DRPTSEVLLKHRFVLRE 312
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 97.1 bits (240), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 108/220 (49%), Gaps = 31/220 (14%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E+ FL + HPN I+ + E+ +LV+E+C G + S + +H + P Q
Sbjct: 65 EVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLG-SASDLLEVHKK-PLQEVEIAAVTH 122
Query: 76 GA--GLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPL 133
GA GL L+SH++IHRD+K NILLS + ++K+ DFG + + P N G+P
Sbjct: 123 GALQGLAYLHSHNMIHRDVKAGNILLS---EPGLVKLGDFGSASIMAPAN---XFVGTPY 176
Query: 134 YMAPEV---LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV-------PALHP 183
+MAPEV + +YD KVD+WS+G EL PP N + + PAL
Sbjct: 177 WMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQS 236
Query: 184 --------DCVDMCLKLLSANTVDRLSFNEFYHHRFLRRN 215
+ VD CL+ + DR + HRF+ R
Sbjct: 237 GHWSEYFRNFVDSCLQKIPQ---DRPTSEVLLKHRFVLRE 273
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 97.1 bits (240), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 94/159 (59%), Gaps = 10/159 (6%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E + ++ N P +++LF AFQ + +++V+E+ GG+L + + + VPE+ A+ + ++
Sbjct: 125 ERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYD-VPEKWAKFYTAEV 183
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN--YAEKVCGSPL 133
L+ ++S +IHRD+KP+N+L LD LK+ADFG + + + G+P
Sbjct: 184 VLALDAIHSMGLIHRDVKPDNML---LDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPD 240
Query: 134 YMAPEVLQFQ----RYDEKVDMWSVGAILFELLNGYPPF 168
Y++PEVL+ Q Y + D WSVG LFE+L G PF
Sbjct: 241 YISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 279
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 97.1 bits (240), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 84/162 (51%), Gaps = 9/162 (5%)
Query: 16 ELNFLSSVNHPNII---RLFDAFQA---ENCIFLVVEFCAGGNLSSYIRLHGR---VPEQ 66
E+ + +NHPN++ + D Q + L +E+C GG+L Y+ + E
Sbjct: 62 EIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEG 121
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
R L + + L L+ + IIHRDLKPENI+L ++ KI D G + L G
Sbjct: 122 PIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCT 181
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPF 168
+ G+ Y+APE+L+ ++Y VD WS G + FE + G+ PF
Sbjct: 182 EFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 97.1 bits (240), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 103/215 (47%), Gaps = 17/215 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
EL L N P I+ + AF ++ I + +E GG+L ++ GR+PEQ K +
Sbjct: 57 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV 116
Query: 76 GAGLEIL-NSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLY 134
GL L H I+HRD+KP NIL++ + +K+ DFG+S L A + G+ Y
Sbjct: 117 IKGLTYLREKHKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLI-DEMANEFVGTRSY 172
Query: 135 MAPEVLQFQRYDEKVDMWSVGAILFELLNG---YPPFSGRNNVQLIV---PALHPDCV-- 186
M+PE LQ Y + D+WS+G L E+ G PP + + IV P P V
Sbjct: 173 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPRPPMAIFELLDYIVNEPPPKLPSAVFS 232
Query: 187 ----DMCLKLLSANTVDRLSFNEFYHHRFLRRNSA 217
D K L N +R + H F++R+ A
Sbjct: 233 LEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDA 267
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 97.1 bits (240), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 84/162 (51%), Gaps = 9/162 (5%)
Query: 16 ELNFLSSVNHPNII---RLFDAFQA---ENCIFLVVEFCAGGNLSSYIRLHGR---VPEQ 66
E+ + +NHPN++ + D Q + L +E+C GG+L Y+ + E
Sbjct: 63 EIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEG 122
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
R L + + L L+ + IIHRDLKPENI+L ++ KI D G + L G
Sbjct: 123 PIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCT 182
Query: 127 KVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPF 168
+ G+ Y+APE+L+ ++Y VD WS G + FE + G+ PF
Sbjct: 183 EFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 95.9 bits (237), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 99/184 (53%), Gaps = 18/184 (9%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIR--------LHGRVPEQT 67
E+ +S +HPNI+ + +F ++ ++LV++ +GG++ I+ G + E T
Sbjct: 58 EIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDEST 117
Query: 68 ARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPG----- 122
L+++ GLE L+ + IHRD+K NILL +D ++IADFG+S L G
Sbjct: 118 IATILREVLEGLEYLHKNGQIHRDVKAGNILLG---EDGSVQIADFGVSAFLATGGDITR 174
Query: 123 NYAEKV-CGSPLYMAPEVL-QFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIVPA 180
N K G+P +MAPEV+ Q + YD K D+WS G EL G P+ +++++
Sbjct: 175 NKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLT 234
Query: 181 LHPD 184
L D
Sbjct: 235 LQND 238
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 95.9 bits (237), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 105/214 (49%), Gaps = 22/214 (10%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E+ LS + P I R F ++ +++++E+ GG+ ++ G + E L+++
Sbjct: 67 EITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLK-PGPLEETYIATILREI 125
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKV-CGSPLY 134
GL+ L+S IHRD+K N+LLS D +K+ADFG++ L G+P +
Sbjct: 126 LKGLDYLHSERKIHRDIKAANVLLSEQGD---VKLADFGVAGQLTDTQIKRNXFVGTPFW 182
Query: 135 MAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRN--NVQLIVPALHP--------- 183
MAPEV++ YD K D+WS+G EL G PP S + V ++P P
Sbjct: 183 MAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLEGQHSK 242
Query: 184 ---DCVDMCLKLLSANTVDRLSFNEFYHHRFLRR 214
+ V+ C L+ + R + E H+F+ R
Sbjct: 243 PFKEFVEAC---LNKDPRFRPTAKELLKHKFITR 273
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 99/184 (53%), Gaps = 18/184 (9%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIR--------LHGRVPEQT 67
E+ +S +HPNI+ + +F ++ ++LV++ +GG++ I+ G + E T
Sbjct: 63 EIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDEST 122
Query: 68 ARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPG----- 122
L+++ GLE L+ + IHRD+K NILL +D ++IADFG+S L G
Sbjct: 123 IATILREVLEGLEYLHKNGQIHRDVKAGNILLG---EDGSVQIADFGVSAFLATGGDITR 179
Query: 123 NYAEKV-CGSPLYMAPEVL-QFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIVPA 180
N K G+P +MAPEV+ Q + YD K D+WS G EL G P+ +++++
Sbjct: 180 NKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLT 239
Query: 181 LHPD 184
L D
Sbjct: 240 LQND 243
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 84/150 (56%), Gaps = 2/150 (1%)
Query: 26 PNIIRLFDAFQAENCIFLVVEFCAGGNLSSYI--RLHGRVPEQTARKFLQQLGAGLEILN 83
P +I L + ++ + I L++E+ AGG + S L V E + ++Q+ G+ L+
Sbjct: 89 PRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH 148
Query: 84 SHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVLQFQ 143
++I+H DLKP+NILLS + +KI DFG+S + ++ G+P Y+APE+L +
Sbjct: 149 QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYD 208
Query: 144 RYDEKVDMWSVGAILFELLNGYPPFSGRNN 173
DMW++G I + LL PF G +N
Sbjct: 209 PITTATDMWNIGIIAYMLLTHTSPFVGEDN 238
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 107/216 (49%), Gaps = 22/216 (10%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E+ LS + P + + + ++ + +++++E+ GG+ + G + E L+++
Sbjct: 55 EITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE-PGPLDETQIATILREI 113
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKV-CGSPLY 134
GL+ L+S IHRD+K N+LLS + +K+ADFG++ L G+P +
Sbjct: 114 LKGLDYLHSEKKIHRDIKAANVLLS---EHGEVKLADFGVAGQLTDTQIKRNTFVGTPFW 170
Query: 135 MAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRN--NVQLIVPALHP--------- 183
MAPEV++ YD K D+WS+G EL G PP S + V ++P +P
Sbjct: 171 MAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSK 230
Query: 184 ---DCVDMCLKLLSANTVDRLSFNEFYHHRFLRRNS 216
+ V+ C L+ R + E H+F+ RN+
Sbjct: 231 PLKEFVEAC---LNKEPSFRPTAKELLKHKFILRNA 263
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 107/216 (49%), Gaps = 22/216 (10%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E+ LS + P + + + ++ + +++++E+ GG+ + G + E L+++
Sbjct: 75 EITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE-PGPLDETQIATILREI 133
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKV-CGSPLY 134
GL+ L+S IHRD+K N+LLS + +K+ADFG++ L G+P +
Sbjct: 134 LKGLDYLHSEKKIHRDIKAANVLLS---EHGEVKLADFGVAGQLTDTQIKRNTFVGTPFW 190
Query: 135 MAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRN--NVQLIVPALHP--------- 183
MAPEV++ YD K D+WS+G EL G PP S + V ++P +P
Sbjct: 191 MAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSK 250
Query: 184 ---DCVDMCLKLLSANTVDRLSFNEFYHHRFLRRNS 216
+ V+ C L+ R + E H+F+ RN+
Sbjct: 251 PLKEFVEAC---LNKEPSFRPTAKELLKHKFILRNA 283
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 107/216 (49%), Gaps = 22/216 (10%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E+ LS + P + + + ++ + +++++E+ GG+ + G + E L+++
Sbjct: 55 EITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE-PGPLDETQIATILREI 113
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKV-CGSPLY 134
GL+ L+S IHRD+K N+LLS + +K+ADFG++ L G+P +
Sbjct: 114 LKGLDYLHSEKKIHRDIKAANVLLS---EHGEVKLADFGVAGQLTDTQIKRNXFVGTPFW 170
Query: 135 MAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRN--NVQLIVPALHP--------- 183
MAPEV++ YD K D+WS+G EL G PP S + V ++P +P
Sbjct: 171 MAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSK 230
Query: 184 ---DCVDMCLKLLSANTVDRLSFNEFYHHRFLRRNS 216
+ V+ C L+ R + E H+F+ RN+
Sbjct: 231 PLKEFVEAC---LNKEPSFRPTAKELLKHKFILRNA 263
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 107/216 (49%), Gaps = 22/216 (10%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E+ LS + P + + + ++ + +++++E+ GG+ + G + E L+++
Sbjct: 70 EITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE-PGPLDETQIATILREI 128
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKV-CGSPLY 134
GL+ L+S IHRD+K N+LLS + +K+ADFG++ L G+P +
Sbjct: 129 LKGLDYLHSEKKIHRDIKAANVLLS---EHGEVKLADFGVAGQLTDTQIKRNXFVGTPFW 185
Query: 135 MAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRN--NVQLIVPALHP--------- 183
MAPEV++ YD K D+WS+G EL G PP S + V ++P +P
Sbjct: 186 MAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSK 245
Query: 184 ---DCVDMCLKLLSANTVDRLSFNEFYHHRFLRRNS 216
+ V+ C L+ R + E H+F+ RN+
Sbjct: 246 PLKEFVEAC---LNKEPSFRPTAKELLKHKFILRNA 278
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 99/179 (55%), Gaps = 11/179 (6%)
Query: 5 LNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYI-RLHGRV 63
L + +C E + L + + I L AFQ +N ++LV+++ GG+L + + + R+
Sbjct: 113 LKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRL 172
Query: 64 PEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN 123
PE+ AR +L ++ ++ ++ H +HRD+KP+NIL +D + +++ADFG L
Sbjct: 173 PEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNIL---MDMNGHIRLADFGSCLKLMEDG 229
Query: 124 YAEK--VCGSPLYMAPEVLQFQ-----RYDEKVDMWSVGAILFELLNGYPPFSGRNNVQ 175
+ G+P Y++PE+LQ RY + D WS+G ++E+L G PF + V+
Sbjct: 230 TVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVE 288
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 94.0 bits (232), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 86/161 (53%), Gaps = 5/161 (3%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E+ L + HPN++ L + F+ + + LV E+C L R VPE + Q
Sbjct: 52 EIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQT 111
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLY-PGNYAEKVCGSPLY 134
+ + H+ IHRD+KPENIL++ ++K+ DFG + L P +Y + + Y
Sbjct: 112 LQAVNFCHKHNCIHRDVKPENILIT---KHSVIKLCDFGFARLLTGPSDYYDDEVATRWY 168
Query: 135 MAPEVL-QFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
+PE+L +Y VD+W++G + ELL+G P + G+++V
Sbjct: 169 RSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDV 209
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 93.6 bits (231), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 100/185 (54%), Gaps = 14/185 (7%)
Query: 1 MLKKLNKHLKSCLDCELNFLSSVN-HPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRL 59
+++K H++S + E+ L H N++ L + F+ E+ +LV E GG++ S+I
Sbjct: 45 IIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHK 104
Query: 60 HGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL 119
E A +Q + + L+ L++ I HRDLKPENIL + +KI DFGL +
Sbjct: 105 RRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGI 164
Query: 120 YPGNYAEKV--------CGSPLYMAPEVLQ-FQR----YDEKVDMWSVGAILFELLNGYP 166
+ CGS YMAPEV++ F YD++ D+WS+G IL+ LL+GYP
Sbjct: 165 KLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYP 224
Query: 167 PFSGR 171
PF GR
Sbjct: 225 PFVGR 229
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 93.6 bits (231), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 111/223 (49%), Gaps = 22/223 (9%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRV-PEQTARKFLQQ 74
E++ + + P++++ + ++ +++V+E+C G++S IRL + E LQ
Sbjct: 74 EISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQS 133
Query: 75 LGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEK--VCGSP 132
GLE L+ IHRD+K NILL + + K+ADFG++ L A++ V G+P
Sbjct: 134 TLKGLEYLHFMRKIHRDIKAGNILL---NTEGHAKLADFGVAGQLT-DXMAKRNXVIGTP 189
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLI--VPALHPDC----- 185
+MAPEV+Q Y+ D+WS+G E+ G PP++ + ++ I +P P
Sbjct: 190 FWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPE 249
Query: 186 ------VDMCLKLLSANTVDRLSFNEFYHHRFLR--RNSAILR 220
D + L + R + + H F+R + +ILR
Sbjct: 250 LWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSAKGVSILR 292
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 106/215 (49%), Gaps = 16/215 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHG-RVPEQTARKFLQQ 74
E++ L+ H NI+ L ++F++ + ++ EF +G ++ I + E+ ++ Q
Sbjct: 51 EISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQ 110
Query: 75 LGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLY 134
+ L+ L+SH+I H D++PENI+ +KI +FG + L PG+ + +P Y
Sbjct: 111 VCEALQFLHSHNIGHFDIRPENIIYQTRRSST-IKIIEFGQARQLKPGDNFRLLFTAPEY 169
Query: 135 MAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIVPALHP----------- 183
APEV Q DMWS+G +++ LL+G PF N Q+I ++
Sbjct: 170 YAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKE 229
Query: 184 ---DCVDMCLKLLSANTVDRLSFNEFYHHRFLRRN 215
+ +D +LL R++ +E H +L++
Sbjct: 230 ISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQK 264
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 89/166 (53%), Gaps = 13/166 (7%)
Query: 17 LNFLSSVNHPNIIRLFDA-----FQAENCIFLVVEFCAGGNLSSYIRL--HGRVPEQTAR 69
L L + HPN++RLFD E + LV E +L++Y+ VP +T +
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIK 123
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYA-EKV 128
+ QL GL+ L+SH ++HRDLKP+NIL++ +K+ADFGL+ +Y A V
Sbjct: 124 DMMFQLLRGLDFLHSHRVVHRDLKPQNILVTS---SGQIKLADFGLA-RIYSFQMALTSV 179
Query: 129 CGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
+ Y APEVL Y VD+WSVG I E+ P F G ++V
Sbjct: 180 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV 225
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 89/166 (53%), Gaps = 13/166 (7%)
Query: 17 LNFLSSVNHPNIIRLFDA-----FQAENCIFLVVEFCAGGNLSSYIRL--HGRVPEQTAR 69
L L + HPN++RLFD E + LV E +L++Y+ VP +T +
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEH-VDQDLTTYLDKVPEPGVPTETIK 123
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYA-EKV 128
+ QL GL+ L+SH ++HRDLKP+NIL++ +K+ADFGL+ +Y A V
Sbjct: 124 DMMFQLLRGLDFLHSHRVVHRDLKPQNILVTS---SGQIKLADFGLA-RIYSFQMALTSV 179
Query: 129 CGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
+ Y APEVL Y VD+WSVG I E+ P F G ++V
Sbjct: 180 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV 225
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 89/166 (53%), Gaps = 13/166 (7%)
Query: 17 LNFLSSVNHPNIIRLFDA-----FQAENCIFLVVEFCAGGNLSSYIRL--HGRVPEQTAR 69
L L + HPN++RLFD E + LV E +L++Y+ VP +T +
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIK 123
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYA-EKV 128
+ QL GL+ L+SH ++HRDLKP+NIL++ +K+ADFGL+ +Y A V
Sbjct: 124 DMMFQLLRGLDFLHSHRVVHRDLKPQNILVTS---SGQIKLADFGLA-RIYSFQMALTSV 179
Query: 129 CGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
+ Y APEVL Y VD+WSVG I E+ P F G ++V
Sbjct: 180 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV 225
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 88/161 (54%), Gaps = 16/161 (9%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVP-----EQTARK 70
EL LS VNHPNI++L+ A N + LV+E+ GG+L Y LHG P A
Sbjct: 51 ELRQLSRVNHPNIVKLYGA--CLNPVCLVMEYAEGGSL--YNVLHGAEPLPYYTAAHAMS 106
Query: 71 FLQQLGAGLEILNSHH---IIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEK 127
+ Q G+ L+S +IHRDLKP N+LL + +LKI DFG +C + K
Sbjct: 107 WCLQCSQGVAYLHSMQPKALIHRDLKPPNLLL--VAGGTVLKICDFGTACDIQTHMTNNK 164
Query: 128 VCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPF 168
GS +MAPEV + Y EK D++S G IL+E++ PF
Sbjct: 165 --GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPF 203
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 88/161 (54%), Gaps = 16/161 (9%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVP-----EQTARK 70
EL LS VNHPNI++L+ A N + LV+E+ GG+L Y LHG P A
Sbjct: 52 ELRQLSRVNHPNIVKLYGA--CLNPVCLVMEYAEGGSL--YNVLHGAEPLPYYTAAHAMS 107
Query: 71 FLQQLGAGLEILNSHH---IIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEK 127
+ Q G+ L+S +IHRDLKP N+LL + +LKI DFG +C + K
Sbjct: 108 WCLQCSQGVAYLHSMQPKALIHRDLKPPNLLL--VAGGTVLKICDFGTACDIQTHMTNNK 165
Query: 128 VCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPF 168
GS +MAPEV + Y EK D++S G IL+E++ PF
Sbjct: 166 --GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPF 204
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 103/225 (45%), Gaps = 27/225 (12%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
EL L N P I+ + AF ++ I + +E GG+L ++ GR+PEQ K +
Sbjct: 54 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV 113
Query: 76 GAGLEIL-NSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLY 134
GL L H I+HRD+KP NIL++ + +K+ DFG+S L + A G+ Y
Sbjct: 114 IKGLTYLREKHKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLI-DSMANSFVGTRSY 169
Query: 135 MAPEVLQFQRYDEKVDMWSVGAILFELLNG-------------YPPFSGRNNVQLIV--- 178
M+PE LQ Y + D+WS+G L E+ G PP + + IV
Sbjct: 170 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEP 229
Query: 179 PALHPDCV------DMCLKLLSANTVDRLSFNEFYHHRFLRRNSA 217
P P V D K L N +R + H F++R+ A
Sbjct: 230 PPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDA 274
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 107/213 (50%), Gaps = 17/213 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRV--PEQTARKFLQ 73
E+ L+++ HPNI++ ++F+ +++V+++C GG+L I V E +
Sbjct: 73 EVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFV 132
Query: 74 QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVC-GSP 132
Q+ L+ ++ I+HRD+K +NI L+ D +++ DFG++ L + C G+P
Sbjct: 133 QICLALKHVHDRKILHRDIKSQNIFLT---KDGTVQLGDFGIARVLNSTVELARACIGTP 189
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLN---GYPPFSGRNNVQLIVPALHP------ 183
Y++PE+ + + Y+ K D+W++G +L+EL + S +N V I+ P
Sbjct: 190 YYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHY 249
Query: 184 --DCVDMCLKLLSANTVDRLSFNEFYHHRFLRR 214
D + +L N DR S N F+ +
Sbjct: 250 SYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAK 282
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 107/223 (47%), Gaps = 19/223 (8%)
Query: 3 KKLNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHG- 61
+ L LK+ E L +HPNI+RL + I++V+E GG+ +++R G
Sbjct: 149 ETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGA 208
Query: 62 RVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYP 121
R+ +T + + AG+E L S IHRDL N L++ + +LKI+DFG+S
Sbjct: 209 RLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVT---EKNVLKISDFGMSREEAD 265
Query: 122 GNYAEK--VCGSPL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQ-- 175
G YA + P+ + APE L + RY + D+WS G +L+E + G P+ +N Q
Sbjct: 266 GVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTR 325
Query: 176 --------LIVPALHPDCVDMCLKLLSA-NTVDRLSFNEFYHH 209
L P L PD V ++ A R SF+ Y
Sbjct: 326 EFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQE 368
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 103/209 (49%), Gaps = 22/209 (10%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYI----RLHGRVPEQTARKF 71
E L+ V+ I+ L AF+ + + LV+ GG++ +I + E A +
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 72 LQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEK-VCG 130
Q+ +GLE L+ +II+RDLKPEN+LL DDD ++I+D GL+ L G K G
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAGQTKTKGYAG 351
Query: 131 SPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRN----NVQLIVPALH---- 182
+P +MAPE+L + YD VD +++G L+E++ PF R N +L L
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVT 411
Query: 183 ------PDCVDMCLKLLSANTVDRLSFNE 205
P D C LL + RL F +
Sbjct: 412 YPDKFSPASKDFCEALLQKDPEKRLGFRD 440
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 103/209 (49%), Gaps = 22/209 (10%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYI----RLHGRVPEQTARKF 71
E L+ V+ I+ L AF+ + + LV+ GG++ +I + E A +
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 72 LQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEK-VCG 130
Q+ +GLE L+ +II+RDLKPEN+LL DDD ++I+D GL+ L G K G
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAGQTKTKGYAG 351
Query: 131 SPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRN----NVQLIVPALH---- 182
+P +MAPE+L + YD VD +++G L+E++ PF R N +L L
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVT 411
Query: 183 ------PDCVDMCLKLLSANTVDRLSFNE 205
P D C LL + RL F +
Sbjct: 412 YPDKFSPASKDFCEALLQKDPEKRLGFRD 440
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 79/150 (52%), Gaps = 6/150 (4%)
Query: 24 NHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQLGAGLEILN 83
HPNII L D + +++V E GG L I E+ A L + +E L+
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLH 133
Query: 84 SHHIIHRDLKPENILL---SGLDDDVMLKIADFGLSCTLYPGN-YAEKVCGSPLYMAPEV 139
+ ++HRDLKP NIL SG + + +I DFG + L N C + ++APEV
Sbjct: 134 AQGVVHRDLKPSNILYVDESGNPESI--RICDFGFAKQLRAENGLLMTPCYTANFVAPEV 191
Query: 140 LQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
L+ Q YD D+WS+G +L+ +L GY PF+
Sbjct: 192 LERQGYDAACDIWSLGVLLYTMLTGYTPFA 221
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 97/177 (54%), Gaps = 10/177 (5%)
Query: 15 CELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSS-YIRLHGRVPEQTARKFLQ 73
E+ L++ +HP I++L A+ + +++++EFC GG + + + L + E + +
Sbjct: 65 VEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCR 124
Query: 74 QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCT-LYPGNYAEKVCGSP 132
Q+ L L+S IIHRDLK N+L++ L+ D+ ++ADFG+S L + G+P
Sbjct: 125 QMLEALNFLHSKRIIHRDLKAGNVLMT-LEGDI--RLADFGVSAKNLKTLQKRDSFIGTP 181
Query: 133 LYMAPEVLQFQR-----YDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIVPALHPD 184
+MAPEV+ + YD K D+WS+G L E+ PP N +++++ D
Sbjct: 182 YWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSD 238
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 103/209 (49%), Gaps = 22/209 (10%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYI----RLHGRVPEQTARKF 71
E L+ V+ I+ L AF+ + + LV+ GG++ +I + E A +
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 72 LQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEK-VCG 130
Q+ +GLE L+ +II+RDLKPEN+LL DDD ++I+D GL+ L G K G
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAGQTKTKGYAG 351
Query: 131 SPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRN----NVQLIVPALH---- 182
+P +MAPE+L + YD VD +++G L+E++ PF R N +L L
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVT 411
Query: 183 ------PDCVDMCLKLLSANTVDRLSFNE 205
P D C LL + RL F +
Sbjct: 412 YPDKFSPASKDFCEALLQKDPEKRLGFRD 440
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 97/177 (54%), Gaps = 10/177 (5%)
Query: 15 CELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSS-YIRLHGRVPEQTARKFLQ 73
E+ L++ +HP I++L A+ + +++++EFC GG + + + L + E + +
Sbjct: 57 VEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCR 116
Query: 74 QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSC-TLYPGNYAEKVCGSP 132
Q+ L L+S IIHRDLK N+L++ L+ D+ ++ADFG+S L + G+P
Sbjct: 117 QMLEALNFLHSKRIIHRDLKAGNVLMT-LEGDI--RLADFGVSAKNLKTLQKRDSFIGTP 173
Query: 133 LYMAPEVLQFQR-----YDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIVPALHPD 184
+MAPEV+ + YD K D+WS+G L E+ PP N +++++ D
Sbjct: 174 YWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSD 230
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 108/219 (49%), Gaps = 18/219 (8%)
Query: 13 LDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRV----PEQTA 68
L E + + HP+I+ L + + ++ +++V EF G +L I E A
Sbjct: 75 LKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVA 134
Query: 69 RKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL-YPGNYAEK 127
+++Q+ L + ++IIHRD+KP +LL+ ++ +K+ FG++ L G A
Sbjct: 135 SHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGG 194
Query: 128 VCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNN--VQLIVPA----- 180
G+P +MAPEV++ + Y + VD+W G ILF LL+G PF G + I+
Sbjct: 195 RVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMN 254
Query: 181 ------LHPDCVDMCLKLLSANTVDRLSFNEFYHHRFLR 213
+ D+ ++L + +R++ E +H +L+
Sbjct: 255 PRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLK 293
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 103/209 (49%), Gaps = 22/209 (10%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYI----RLHGRVPEQTARKF 71
E L+ V+ I+ L AF+ + + LV+ GG++ +I + E A +
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 72 LQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEK-VCG 130
Q+ +GLE L+ +II+RDLKPEN+LL DDD ++I+D GL+ L G K G
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAGQTKTKGYAG 351
Query: 131 SPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRN----NVQLIVPALH---- 182
+P +MAPE+L + YD VD +++G L+E++ PF R N +L L
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVT 411
Query: 183 ------PDCVDMCLKLLSANTVDRLSFNE 205
P D C LL + RL F +
Sbjct: 412 YPDKFSPASKDFCEALLQKDPEKRLGFRD 440
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 108/221 (48%), Gaps = 18/221 (8%)
Query: 13 LDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRV----PEQTA 68
L E + + HP+I+ L + + ++ +++V EF G +L I E A
Sbjct: 73 LKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVA 132
Query: 69 RKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL-YPGNYAEK 127
+++Q+ L + ++IIHRD+KP +LL+ ++ +K+ FG++ L G A
Sbjct: 133 SHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGG 192
Query: 128 VCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNN--VQLIVPA----- 180
G+P +MAPEV++ + Y + VD+W G ILF LL+G PF G + I+
Sbjct: 193 RVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMN 252
Query: 181 ------LHPDCVDMCLKLLSANTVDRLSFNEFYHHRFLRRN 215
+ D+ ++L + +R++ E +H +L+
Sbjct: 253 PRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKER 293
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 20/215 (9%)
Query: 15 CELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQ 74
E L + HP + L +FQ + + V+E+ GG L ++ E AR + +
Sbjct: 200 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE 259
Query: 75 LGAGLEILNSH-HIIHRDLKPENILLSGLDDDVMLKIADFGL-SCTLYPGNYAEKVCGSP 132
+ + L+ L+S ++++RDLK EN++L D D +KI DFGL + G + CG+P
Sbjct: 260 IVSALDYLHSEKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKTFCGTP 316
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV----------PALH 182
Y+APEVL+ Y VD W +G +++E++ G PF +++ +L L
Sbjct: 317 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLG 376
Query: 183 PDCVDMCLKLLSANTVDRLS-----FNEFYHHRFL 212
P+ + LL + RL E HRF
Sbjct: 377 PEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 411
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 20/215 (9%)
Query: 15 CELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQ 74
E L + HP + L +FQ + + V+E+ GG L ++ E AR + +
Sbjct: 197 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE 256
Query: 75 LGAGLEILNSH-HIIHRDLKPENILLSGLDDDVMLKIADFGL-SCTLYPGNYAEKVCGSP 132
+ + L+ L+S ++++RDLK EN++L D D +KI DFGL + G + CG+P
Sbjct: 257 IVSALDYLHSEKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKTFCGTP 313
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV----------PALH 182
Y+APEVL+ Y VD W +G +++E++ G PF +++ +L L
Sbjct: 314 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLG 373
Query: 183 PDCVDMCLKLLSANTVDRLS-----FNEFYHHRFL 212
P+ + LL + RL E HRF
Sbjct: 374 PEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 408
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 106/232 (45%), Gaps = 27/232 (11%)
Query: 16 ELNFLSSVNHPNIIRLFDAF--QAENCIFLVVEFCAGGNLSSYIRL-HGRVPEQTARKFL 72
E+ L + H N+I+L D + + +++V+E+C G + R P A +
Sbjct: 56 EIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYF 115
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVC--- 129
QL GLE L+S I+H+D+KP N+LL+ LKI+ G++ L+P A+ C
Sbjct: 116 CQLIDGLEYLHSQGIVHKDIKPGNLLLT---TGGTLKISALGVAEALHP-FAADDTCRTS 171
Query: 130 -GSPLYMAPEVL----QFQRYDEKVDMWSVGAILFELLNGYPPFSGRN------NVQLIV 178
GSP + PE+ F + KVD+WS G L+ + G PF G N N+
Sbjct: 172 QGSPAFQPPEIANGLDTFSGF--KVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGS 229
Query: 179 PALHPDC----VDMCLKLLSANTVDRLSFNEFYHHRFLRRNSAILRAPFHIP 226
A+ DC D+ +L R S + H + R+ AP IP
Sbjct: 230 YAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPPAEAPVPIP 281
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 20/215 (9%)
Query: 15 CELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQ 74
E L + HP + L +FQ + + V+E+ GG L ++ E AR + +
Sbjct: 59 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE 118
Query: 75 LGAGLEILNSH-HIIHRDLKPENILLSGLDDDVMLKIADFGL-SCTLYPGNYAEKVCGSP 132
+ + L+ L+S ++++RDLK EN++L D D +KI DFGL + G + CG+P
Sbjct: 119 IVSALDYLHSEKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKXFCGTP 175
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV----------PALH 182
Y+APEVL+ Y VD W +G +++E++ G PF +++ +L L
Sbjct: 176 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLG 235
Query: 183 PDCVDMCLKLLSANTVDRLS-----FNEFYHHRFL 212
P+ + LL + RL E HRF
Sbjct: 236 PEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 270
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 20/215 (9%)
Query: 15 CELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQ 74
E L + HP + L +FQ + + V+E+ GG L ++ E AR + +
Sbjct: 58 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE 117
Query: 75 LGAGLEILNSH-HIIHRDLKPENILLSGLDDDVMLKIADFGL-SCTLYPGNYAEKVCGSP 132
+ + L+ L+S ++++RDLK EN++L D D +KI DFGL + G + CG+P
Sbjct: 118 IVSALDYLHSEKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKXFCGTP 174
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV----------PALH 182
Y+APEVL+ Y VD W +G +++E++ G PF +++ +L L
Sbjct: 175 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLG 234
Query: 183 PDCVDMCLKLLSANTVDRLS-----FNEFYHHRFL 212
P+ + LL + RL E HRF
Sbjct: 235 PEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 269
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 20/215 (9%)
Query: 15 CELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQ 74
E L + HP + L +FQ + + V+E+ GG L ++ E AR + +
Sbjct: 57 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE 116
Query: 75 LGAGLEILNSH-HIIHRDLKPENILLSGLDDDVMLKIADFGL-SCTLYPGNYAEKVCGSP 132
+ + L+ L+S ++++RDLK EN++L D D +KI DFGL + G + CG+P
Sbjct: 117 IVSALDYLHSEKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKXFCGTP 173
Query: 133 LYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV----------PALH 182
Y+APEVL+ Y VD W +G +++E++ G PF +++ +L L
Sbjct: 174 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLG 233
Query: 183 PDCVDMCLKLLSANTVDRLS-----FNEFYHHRFL 212
P+ + LL + RL E HRF
Sbjct: 234 PEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 268
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 90.9 bits (224), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 77/148 (52%), Gaps = 2/148 (1%)
Query: 24 NHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQLGAGLEILN 83
HPNII L D + +++V E GG L I E+ A L + +E L+
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLH 133
Query: 84 SHHIIHRDLKPENIL-LSGLDDDVMLKIADFGLSCTLYPGN-YAEKVCGSPLYMAPEVLQ 141
+ ++HRDLKP NIL + + ++I DFG + L N C + ++APEVL+
Sbjct: 134 AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVAPEVLE 193
Query: 142 FQRYDEKVDMWSVGAILFELLNGYPPFS 169
Q YD D+WS+G +L+ L GY PF+
Sbjct: 194 RQGYDAACDIWSLGVLLYTXLTGYTPFA 221
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 90.9 bits (224), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 101/185 (54%), Gaps = 14/185 (7%)
Query: 1 MLKKLNKHLKSCLDCELNFLSSVN-HPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRL 59
+++K H++S + E+ L H N++ L + F+ E+ +LV E GG++ S+I
Sbjct: 45 IIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHK 104
Query: 60 HGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL 119
E A +Q + + L+ L++ I HRDLKPENIL + +KI DF L +
Sbjct: 105 RRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGI 164
Query: 120 ------YPGNYAE--KVCGSPLYMAPEVLQ-FQR----YDEKVDMWSVGAILFELLNGYP 166
P + E CGS YMAPEV++ F YD++ D+WS+G IL+ LL+GYP
Sbjct: 165 KLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYP 224
Query: 167 PFSGR 171
PF GR
Sbjct: 225 PFVGR 229
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 90.1 bits (222), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 104/195 (53%), Gaps = 15/195 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL--- 72
E+ L H NI+ LF + + + +V ++C G +L Y LH + +K +
Sbjct: 70 EVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSL--YHHLHASETKFEMKKLIDIA 126
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSC--TLYPGNYA-EKVC 129
+Q G++ L++ IIHRDLK NI L +D +KI DFGL+ + + G++ E++
Sbjct: 127 RQTARGMDYLHAKSIIHRDLKSNNIFLH---EDNTVKIGDFGLATEKSRWSGSHQFEQLS 183
Query: 130 GSPLYMAPEVLQFQR---YDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIVPALHPDCV 186
GS L+MAPEV++ Q Y + D+++ G +L+EL+ G P+S NN I+ + +
Sbjct: 184 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSL 243
Query: 187 DMCLKLLSANTVDRL 201
L + +N R+
Sbjct: 244 SPDLSKVRSNCPKRM 258
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 90.1 bits (222), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 94/172 (54%), Gaps = 17/172 (9%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCI----FLVVEFCAGGNLSSYIRLHGRVPEQTARKF 71
E +++NHP I+ ++D +AE ++V+E+ G L + G + T ++
Sbjct: 62 EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM---TPKRA 118
Query: 72 LQQLGAGLEILNSHH---IIHRDLKPENILLSGLDDDVMLKIADFGLSCTLY-PGNYAEK 127
++ + + LN H IIHRD+KP NIL+S + +K+ DFG++ + GN +
Sbjct: 119 IEVIADACQALNFSHQNGIIHRDVKPANILISATN---AVKVVDFGIARAIADSGNSVXQ 175
Query: 128 ---VCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL 176
V G+ Y++PE + D + D++S+G +L+E+L G PPF+G + V +
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV 227
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 90.1 bits (222), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 104/195 (53%), Gaps = 15/195 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL--- 72
E+ L H NI+ LF + + + +V ++C G +L Y LH + +K +
Sbjct: 58 EVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSL--YHHLHASETKFEMKKLIDIA 114
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSC--TLYPGNYA-EKVC 129
+Q G++ L++ IIHRDLK NI L +D +KI DFGL+ + + G++ E++
Sbjct: 115 RQTARGMDYLHAKSIIHRDLKSNNIFLH---EDNTVKIGDFGLATVKSRWSGSHQFEQLS 171
Query: 130 GSPLYMAPEVLQFQR---YDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIVPALHPDCV 186
GS L+MAPEV++ Q Y + D+++ G +L+EL+ G P+S NN I+ + +
Sbjct: 172 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSL 231
Query: 187 DMCLKLLSANTVDRL 201
L + +N R+
Sbjct: 232 SPDLSKVRSNCPKRM 246
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 85/166 (51%), Gaps = 12/166 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYI--RLHGRVPE----QTAR 69
E++ + + H NI+RL+D EN + LV EF +L Y+ R G P +
Sbjct: 53 EISLMKELKHENIVRLYDVIHTENKLTLVFEFM-DNDLKKYMDSRTVGNTPRGLELNLVK 111
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL-YPGNYAEKV 128
F QL GL + + I+HRDLKP+N+L+ + LK+ DFGL+ P N
Sbjct: 112 YFQWQLLQGLAFCHENKILHRDLKPQNLLI---NKRGQLKLGDFGLARAFGIPVNTFSSE 168
Query: 129 CGSPLYMAPEVLQFQR-YDEKVDMWSVGAILFELLNGYPPFSGRNN 173
+ Y AP+VL R Y +D+WS G IL E++ G P F G N+
Sbjct: 169 VVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTND 214
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 86/158 (54%), Gaps = 7/158 (4%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E++ L ++HPNI+ L D +E C+ LV EF + + + +L QL
Sbjct: 69 EISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQL 128
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCT--LYPGNYAEKVCGSPL 133
G+ + H I+HRDLKP+N+L ++ D LK+ADFGL+ + +Y +V +
Sbjct: 129 LRGVAHCHQHRILHRDLKPQNLL---INSDGALKLADFGLARAFGIPVRSYTHEVV-TLW 184
Query: 134 YMAPEVLQ-FQRYDEKVDMWSVGAILFELLNGYPPFSG 170
Y AP+VL ++Y VD+WS+G I E++ G P F G
Sbjct: 185 YRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPG 222
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 82/153 (53%), Gaps = 6/153 (3%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
EL L N P I+ + AF ++ I + +E GG+L ++ GR+PEQ K +
Sbjct: 54 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV 113
Query: 76 GAGLEIL-NSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLY 134
GL L H I+HRD+KP NIL++ + +K+ DFG+S L + A G+ Y
Sbjct: 114 IKGLTYLREKHKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLI-DSMANSFVGTRSY 169
Query: 135 MAPEVLQFQRYDEKVDMWSVGAILFELLNG-YP 166
M+PE LQ Y + D+WS+G L E+ G YP
Sbjct: 170 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 108/213 (50%), Gaps = 18/213 (8%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E+ + H N++ +++++ + +++V+EF GG L+ + H R+ E+ +
Sbjct: 67 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV-THTRMNEEQIAAVCLAV 125
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEK-VCGSPLY 134
L +L++ +IHRD+K ++ILL+ D +K++DFG + K + G+P +
Sbjct: 126 LQALSVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYW 182
Query: 135 MAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSG----------RNNVQLIVPALH-- 182
MAPE++ Y +VD+WS+G ++ E+++G PP+ R+N+ + LH
Sbjct: 183 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKV 242
Query: 183 -PDCVDMCLKLLSANTVDRLSFNEFYHHRFLRR 214
P +LL + R + E H FL +
Sbjct: 243 SPSLKGFLDRLLVRDPAQRATAAELLKHPFLAK 275
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 86/158 (54%), Gaps = 7/158 (4%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E++ L ++HPNI+ L D +E C+ LV EF + + + +L QL
Sbjct: 69 EISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQL 128
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCT--LYPGNYAEKVCGSPL 133
G+ + H I+HRDLKP+N+L ++ D LK+ADFGL+ + +Y +V +
Sbjct: 129 LRGVAHCHQHRILHRDLKPQNLL---INSDGALKLADFGLARAFGIPVRSYTHEVV-TLW 184
Query: 134 YMAPEVLQ-FQRYDEKVDMWSVGAILFELLNGYPPFSG 170
Y AP+VL ++Y VD+WS+G I E++ G P F G
Sbjct: 185 YRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPG 222
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 82/153 (53%), Gaps = 6/153 (3%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
EL L N P I+ + AF ++ I + +E GG+L ++ GR+PEQ K +
Sbjct: 116 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV 175
Query: 76 GAGLEIL-NSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLY 134
GL L H I+HRD+KP NIL++ + +K+ DFG+S L + A G+ Y
Sbjct: 176 IKGLTYLREKHKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLI-DSMANSFVGTRSY 231
Query: 135 MAPEVLQFQRYDEKVDMWSVGAILFELLNG-YP 166
M+PE LQ Y + D+WS+G L E+ G YP
Sbjct: 232 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 108/213 (50%), Gaps = 18/213 (8%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E+ + H N++ +++++ + +++V+EF GG L+ + H R+ E+ +
Sbjct: 71 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV-THTRMNEEQIAAVCLAV 129
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEK-VCGSPLY 134
L +L++ +IHRD+K ++ILL+ D +K++DFG + K + G+P +
Sbjct: 130 LQALSVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYW 186
Query: 135 MAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSG----------RNNVQLIVPALH-- 182
MAPE++ Y +VD+WS+G ++ E+++G PP+ R+N+ + LH
Sbjct: 187 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKV 246
Query: 183 -PDCVDMCLKLLSANTVDRLSFNEFYHHRFLRR 214
P +LL + R + E H FL +
Sbjct: 247 SPSLKGFLDRLLVRDPAQRATAAELLKHPFLAK 279
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 81/154 (52%), Gaps = 5/154 (3%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
EL L N P I+ + AF ++ I + +E GG+L ++ GR+PEQ K +
Sbjct: 54 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV 113
Query: 76 GAGLEIL-NSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLY 134
GL L H I+HRD+KP NIL++ + +K+ DFG+S L + A G+ Y
Sbjct: 114 IKGLTYLREKHKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLI-DSMANSFVGTRSY 169
Query: 135 MAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPF 168
M+PE LQ Y + D+WS+G L E+ G P
Sbjct: 170 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 81/154 (52%), Gaps = 5/154 (3%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
EL L N P I+ + AF ++ I + +E GG+L ++ GR+PEQ K +
Sbjct: 54 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV 113
Query: 76 GAGLEIL-NSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLY 134
GL L H I+HRD+KP NIL++ + +K+ DFG+S L + A G+ Y
Sbjct: 114 IKGLTYLREKHKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLI-DSMANSFVGTRSY 169
Query: 135 MAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPF 168
M+PE LQ Y + D+WS+G L E+ G P
Sbjct: 170 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 98/179 (54%), Gaps = 11/179 (6%)
Query: 5 LNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYI-RLHGRV 63
L + +C E + L + + I L AFQ EN ++LV+++ GG+L + + + ++
Sbjct: 113 LKRAETACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKL 172
Query: 64 PEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN 123
PE AR ++ ++ ++ ++ H +HRD+KP+N+L LD + +++ADFG +
Sbjct: 173 PEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVL---LDVNGHIRLADFGSCLKMNDDG 229
Query: 124 YAEK--VCGSPLYMAPEVLQ-----FQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQ 175
+ G+P Y++PE+LQ +Y + D WS+G ++E+L G PF + V+
Sbjct: 230 TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE 288
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 82/153 (53%), Gaps = 6/153 (3%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
EL L N P I+ + AF ++ I + +E GG+L ++ GR+PEQ K +
Sbjct: 54 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV 113
Query: 76 GAGLEIL-NSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLY 134
GL L H I+HRD+KP NIL++ + +K+ DFG+S L + A G+ Y
Sbjct: 114 IKGLTYLREKHKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLI-DSMANSFVGTRSY 169
Query: 135 MAPEVLQFQRYDEKVDMWSVGAILFELLNG-YP 166
M+PE LQ Y + D+WS+G L E+ G YP
Sbjct: 170 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 81/154 (52%), Gaps = 5/154 (3%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
EL L N P I+ + AF ++ I + +E GG+L ++ GR+PEQ K +
Sbjct: 81 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV 140
Query: 76 GAGLEIL-NSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLY 134
GL L H I+HRD+KP NIL++ + +K+ DFG+S L + A G+ Y
Sbjct: 141 IKGLTYLREKHKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLI-DSMANSFVGTRSY 196
Query: 135 MAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPF 168
M+PE LQ Y + D+WS+G L E+ G P
Sbjct: 197 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 103/195 (52%), Gaps = 15/195 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL--- 72
E+ L H NI+ LF + + +V ++C G +L Y LH + +K +
Sbjct: 70 EVGVLRKTRHVNIL-LFMGYSTAPQLAIVTQWCEGSSL--YHHLHASETKFEMKKLIDIA 126
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSC--TLYPGNYA-EKVC 129
+Q G++ L++ IIHRDLK NI L +D +KI DFGL+ + + G++ E++
Sbjct: 127 RQTARGMDYLHAKSIIHRDLKSNNIFLH---EDNTVKIGDFGLATEKSRWSGSHQFEQLS 183
Query: 130 GSPLYMAPEVLQFQR---YDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIVPALHPDCV 186
GS L+MAPEV++ Q Y + D+++ G +L+EL+ G P+S NN I+ + +
Sbjct: 184 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSL 243
Query: 187 DMCLKLLSANTVDRL 201
L + +N R+
Sbjct: 244 SPDLSKVRSNCPKRM 258
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 108/213 (50%), Gaps = 18/213 (8%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E+ + H N++ +++++ + +++V+EF GG L+ + H R+ E+ +
Sbjct: 76 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV-THTRMNEEQIAAVCLAV 134
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEK-VCGSPLY 134
L +L++ +IHRD+K ++ILL+ D +K++DFG + K + G+P +
Sbjct: 135 LQALSVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYW 191
Query: 135 MAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSG----------RNNVQLIVPALH-- 182
MAPE++ Y +VD+WS+G ++ E+++G PP+ R+N+ + LH
Sbjct: 192 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKV 251
Query: 183 -PDCVDMCLKLLSANTVDRLSFNEFYHHRFLRR 214
P +LL + R + E H FL +
Sbjct: 252 SPSLKGFLDRLLVRDPAQRATAAELLKHPFLAK 284
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 98/179 (54%), Gaps = 11/179 (6%)
Query: 5 LNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYI-RLHGRV 63
L + +C E + L + + I L AFQ EN ++LV+++ GG+L + + + ++
Sbjct: 129 LKRAETACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKL 188
Query: 64 PEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN 123
PE AR ++ ++ ++ ++ H +HRD+KP+N+L LD + +++ADFG +
Sbjct: 189 PEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVL---LDVNGHIRLADFGSCLKMNDDG 245
Query: 124 YAEK--VCGSPLYMAPEVLQ-----FQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQ 175
+ G+P Y++PE+LQ +Y + D WS+G ++E+L G PF + V+
Sbjct: 246 TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE 304
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 108/213 (50%), Gaps = 18/213 (8%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E+ + H N++ +++++ + +++V+EF GG L+ + H R+ E+ +
Sbjct: 78 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV-THTRMNEEQIAAVCLAV 136
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEK-VCGSPLY 134
L +L++ +IHRD+K ++ILL+ D +K++DFG + K + G+P +
Sbjct: 137 LQALSVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYW 193
Query: 135 MAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSG----------RNNVQLIVPALH-- 182
MAPE++ Y +VD+WS+G ++ E+++G PP+ R+N+ + LH
Sbjct: 194 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKV 253
Query: 183 -PDCVDMCLKLLSANTVDRLSFNEFYHHRFLRR 214
P +LL + R + E H FL +
Sbjct: 254 SPSLKGFLDRLLVRDPAQRATAAELLKHPFLAK 286
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 116/230 (50%), Gaps = 21/230 (9%)
Query: 2 LKKLN---KHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIR 58
+KK++ + + L E+ + H N++ +++++ + +++V+EF GG L+ +
Sbjct: 104 VKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV- 162
Query: 59 LHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCT 118
H R+ E+ + L +L++ +IHRD+K ++ILL+ D +K++DFG
Sbjct: 163 THTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFGFCAQ 219
Query: 119 LYPGNYAEK-VCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSG------- 170
+ K + G+P +MAPE++ Y +VD+WS+G ++ E+++G PP+
Sbjct: 220 VSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM 279
Query: 171 ---RNNVQLIVPALH---PDCVDMCLKLLSANTVDRLSFNEFYHHRFLRR 214
R+N+ + LH P +LL + R + E H FL +
Sbjct: 280 KMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAK 329
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 94/172 (54%), Gaps = 17/172 (9%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCI----FLVVEFCAGGNLSSYIRLHGRVPEQTARKF 71
E +++NHP I+ ++D +AE ++V+E+ G L + G + T ++
Sbjct: 62 EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM---TPKRA 118
Query: 72 LQQLGAGLEILNSHH---IIHRDLKPENILLSGLDDDVMLKIADFGLSCTLY-PGNYAEK 127
++ + + LN H IIHRD+KP NI++S + +K+ DFG++ + GN +
Sbjct: 119 IEVIADACQALNFSHQNGIIHRDVKPANIMISATN---AVKVMDFGIARAIADSGNSVTQ 175
Query: 128 ---VCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL 176
V G+ Y++PE + D + D++S+G +L+E+L G PPF+G + V +
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV 227
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 106/223 (47%), Gaps = 19/223 (8%)
Query: 3 KKLNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHG- 61
+ L LK+ E L +HPNI+RL + I++V+E GG+ +++R G
Sbjct: 149 ETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGA 208
Query: 62 RVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYP 121
R+ +T + + AG+E L S IHRDL N L++ + +LKI+DFG+S
Sbjct: 209 RLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVT---EKNVLKISDFGMSREEAD 265
Query: 122 GNYAEK--VCGSPL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQ-- 175
G A + P+ + APE L + RY + D+WS G +L+E + G P+ +N Q
Sbjct: 266 GVXAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTR 325
Query: 176 --------LIVPALHPDCVDMCLKLLSA-NTVDRLSFNEFYHH 209
L P L PD V ++ A R SF+ Y
Sbjct: 326 EFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQE 368
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 94/172 (54%), Gaps = 17/172 (9%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCI----FLVVEFCAGGNLSSYIRLHGRVPEQTARKF 71
E +++NHP I+ ++D +AE ++V+E+ G L + G + T ++
Sbjct: 62 EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM---TPKRA 118
Query: 72 LQQLGAGLEILNSHH---IIHRDLKPENILLSGLDDDVMLKIADFGLSCTLY-PGNYAEK 127
++ + + LN H IIHRD+KP NI++S + +K+ DFG++ + GN +
Sbjct: 119 IEVIADACQALNFSHQNGIIHRDVKPANIMISATN---AVKVMDFGIARAIADSGNSVTQ 175
Query: 128 ---VCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL 176
V G+ Y++PE + D + D++S+G +L+E+L G PPF+G + V +
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV 227
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 91/171 (53%), Gaps = 5/171 (2%)
Query: 6 NKHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPE 65
+K +K E+ L + H N++ L + + + +LV EF L +
Sbjct: 64 DKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDY 123
Query: 66 QTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL-YPGNY 124
Q +K+L Q+ G+ +SH+IIHRD+KPENIL+S ++K+ DFG + TL PG
Sbjct: 124 QVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVS---QSGVVKLCDFGFARTLAAPGEV 180
Query: 125 AEKVCGSPLYMAPEVLQFQ-RYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
+ + Y APE+L +Y + VD+W++G ++ E+ G P F G +++
Sbjct: 181 YDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDI 231
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 93/172 (54%), Gaps = 17/172 (9%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCI----FLVVEFCAGGNLSSYIRLHGRVPEQTARKF 71
E +++NHP I+ ++D +AE ++V+E+ G L + G T ++
Sbjct: 79 EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---PMTPKRA 135
Query: 72 LQQLGAGLEILNSHH---IIHRDLKPENILLSGLDDDVMLKIADFGLSCTLY-PGNYAEK 127
++ + + LN H IIHRD+KP NI++S + +K+ DFG++ + GN +
Sbjct: 136 IEVIADACQALNFSHQNGIIHRDVKPANIMISATN---AVKVMDFGIARAIADSGNSVTQ 192
Query: 128 ---VCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL 176
V G+ Y++PE + D + D++S+G +L+E+L G PPF+G + V +
Sbjct: 193 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV 244
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 115/228 (50%), Gaps = 21/228 (9%)
Query: 2 LKKLN---KHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIR 58
+KK++ + + L E+ + H N++ +++++ + +++V+EF GG L+ +
Sbjct: 181 VKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV- 239
Query: 59 LHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCT 118
H R+ E+ + L +L++ +IHRD+K ++ILL+ D +K++DFG
Sbjct: 240 THTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFGFCAQ 296
Query: 119 LYPGNYAEK-VCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSG------- 170
+ K + G+P +MAPE++ Y +VD+WS+G ++ E+++G PP+
Sbjct: 297 VSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM 356
Query: 171 ---RNNVQLIVPALH---PDCVDMCLKLLSANTVDRLSFNEFYHHRFL 212
R+N+ + LH P +LL + R + E H FL
Sbjct: 357 KMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 404
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 100/228 (43%), Gaps = 48/228 (21%)
Query: 2 LKKLNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIR--- 58
++++N + E+ + ++HPNI RL++ ++ E I LV+E C GG+L +
Sbjct: 64 IRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFI 123
Query: 59 ------------------------------LHGRVP-------EQTARKFLQQLGAGLEI 81
+HG E+ ++Q+ + L
Sbjct: 124 DDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHY 183
Query: 82 LNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE-----KVCGSPLYMA 136
L++ I HRD+KPEN L S + +K+ DFGLS Y N E G+P ++A
Sbjct: 184 LHNQGICHRDIKPENFLFS-TNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVA 242
Query: 137 PEVLQF--QRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIVPALH 182
PEVL + Y K D WS G +L LL G PF G N+ I L+
Sbjct: 243 PEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLN 290
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 92/164 (56%), Gaps = 11/164 (6%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRV--PEQTARKFLQ 73
E+ L ++HPNII L DAF ++ I LV +F +L I+ + V P L
Sbjct: 62 EIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLM 120
Query: 74 QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN--YAEKVCGS 131
L GLE L+ H I+HRDLKP N+L LD++ +LK+ADFGL+ + N Y +V +
Sbjct: 121 TL-QGLEYLHQHWILHRDLKPNNLL---LDENGVLKLADFGLAKSFGSPNRAYXHQVV-T 175
Query: 132 PLYMAPEVLQFQR-YDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
Y APE+L R Y VDMW+VG IL ELL P G +++
Sbjct: 176 RWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDL 219
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 88/163 (53%), Gaps = 8/163 (4%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHG--RVPEQTARKFLQ 73
E++ L +NHPNI++L D EN ++LV EF + +L ++ +P + +L
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLF 111
Query: 74 QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL-YPGNYAEKVCGSP 132
QL GL +SH ++HRDLKPEN+L ++ + +K+ADFGL+ P +
Sbjct: 112 QLLQGLAFCHSHRVLHRDLKPENLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTL 168
Query: 133 LYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
Y APE+ L + Y VD+WS+G I E++ F G + +
Sbjct: 169 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 211
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 88/163 (53%), Gaps = 8/163 (4%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHG--RVPEQTARKFLQ 73
E++ L +NHPNI++L D EN ++LV EF + +L ++ +P + +L
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLF 113
Query: 74 QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL-YPGNYAEKVCGSP 132
QL GL +SH ++HRDLKPEN+L ++ + +K+ADFGL+ P +
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKPENLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTL 170
Query: 133 LYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
Y APE+ L + Y VD+WS+G I E++ F G + +
Sbjct: 171 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 213
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 90/168 (53%), Gaps = 8/168 (4%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH--GRVPEQTARKFLQ 73
E N + ++ H ++RL+ E I+++ E+ A G+L +++ G+V F
Sbjct: 58 EANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSA 117
Query: 74 QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY-AEKVCGSP 132
Q+ G+ + + IHRDL+ N+L+S + +M KIADFGL+ + Y A + P
Sbjct: 118 QIAEGMAYIERKNYIHRDLRAANVLVS---ESLMCKIADFGLARVIEDNEYTAREGAKFP 174
Query: 133 L-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIV 178
+ + APE + F + K D+WS G +L+E++ G P+ GR N ++
Sbjct: 175 IKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMT 222
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 90/170 (52%), Gaps = 7/170 (4%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGG-NLSSYIRLHGRVPEQTARKFLQQ 74
E+ LS V H NII++ D F+ + LV+E G +L ++I H R+ E A +Q
Sbjct: 79 EIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQ 138
Query: 75 LGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLY 134
L + + L IIHRD+K ENI+++ +D +K+ DFG + L G CG+ Y
Sbjct: 139 LVSAVGYLRLKDIIHRDIKDENIVIA---EDFTIKLIDFGSAAYLERGKLFYTFCGTIEY 195
Query: 135 MAPEVLQFQRY-DEKVDMWSVGAILFELLNGYPPFSGRNNVQLIVPALHP 183
APEVL Y +++MWS+G L+ L+ PF + + A+HP
Sbjct: 196 CAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELE--ETVEAAIHP 243
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 91/166 (54%), Gaps = 17/166 (10%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCI----FLVVEFCAGGNLSSYIRLHGRVPEQTARKF 71
E +++NHP I+ ++D +AE ++V+E+ G L + G + T ++
Sbjct: 62 EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM---TPKRA 118
Query: 72 LQQLGAGLEILNSHH---IIHRDLKPENILLSGLDDDVMLKIADFGLSCTLY-PGNYAEK 127
++ + + LN H IIHRD+KP NI++S + +K+ DFG++ + GN +
Sbjct: 119 IEVIADACQALNFSHQNGIIHRDVKPANIMISATN---AVKVMDFGIARAIADSGNSVTQ 175
Query: 128 ---VCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSG 170
V G+ Y++PE + D + D++S+G +L+E+L G PPF+G
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 87.8 bits (216), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 88/154 (57%), Gaps = 5/154 (3%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E+ + +H N++ ++ ++ + +++V+EF GG L+ + H R+ E+ +
Sbjct: 92 EVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIV-THTRMNEEQIATVCLSV 150
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEK-VCGSPLY 134
L L++ +IHRD+K ++ILL+ D +K++DFG + K + G+P +
Sbjct: 151 LRALSYLHNQGVIHRDIKSDSILLTS---DGRIKLSDFGFCAQVSKEVPKRKXLVGTPYW 207
Query: 135 MAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPF 168
MAPEV+ Y +VD+WS+G ++ E+++G PP+
Sbjct: 208 MAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPY 241
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 83/165 (50%), Gaps = 12/165 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENC------IFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
EL L VNH NII L + F + ++LV+E NL I H + +
Sbjct: 71 ELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVI--HMELDHERMS 127
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVC 129
L Q+ G++ L+S IIHRDLKP NI++ D LKI DFGL+ T
Sbjct: 128 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTASTNFMMTPYV 184
Query: 130 GSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
+ Y APEV+ Y E VD+WSVG I+ EL+ G F G +++
Sbjct: 185 VTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHI 229
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 90/167 (53%), Gaps = 8/167 (4%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH--GRVPEQTARKFLQ 73
E N + ++ H ++RL+ E I+++ EF A G+L +++ G+V F
Sbjct: 57 EANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSA 116
Query: 74 QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY-AEKVCGSP 132
Q+ G+ + + IHRDL+ N+L+S + +M KIADFGL+ + Y A + P
Sbjct: 117 QIAEGMAYIERKNYIHRDLRAANVLVS---ESLMCKIADFGLARVIEDNEYTAREGAKFP 173
Query: 133 L-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
+ + APE + F + K ++WS G +L+E++ G P+ GR N ++
Sbjct: 174 IKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVM 220
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 89/164 (54%), Gaps = 10/164 (6%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYI---RLHGRVPEQTARKFL 72
E++ L +NHPNI++L D EN ++LV EF +L ++ L G +P + +L
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG-IPLPLIKSYL 109
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL-YPGNYAEKVCGS 131
QL GL +SH ++HRDLKP+N+L ++ + +K+ADFGL+ P +
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYTHEVVT 166
Query: 132 PLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
Y APE+ L + Y VD+WS+G I E++ F G + +
Sbjct: 167 LWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 85/165 (51%), Gaps = 12/165 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENC------IFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
EL + VNH NII L + F + +++V+E NLS I++ + +
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQME--LDHERMS 129
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVC 129
L Q+ G++ L+S IIHRDLKP NI++ D LKI DFGL+ T
Sbjct: 130 YLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFMMTPYV 186
Query: 130 GSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
+ Y APEV+ Y E VD+WSVG I+ E++ G F G +++
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHI 231
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 87/163 (53%), Gaps = 8/163 (4%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHG--RVPEQTARKFLQ 73
E++ L +NHPNI++L D EN ++LV EF +L ++ +P + +L
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 111
Query: 74 QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL-YPGNYAEKVCGSP 132
QL GL +SH ++HRDLKPEN+L ++ + +K+ADFGL+ P +
Sbjct: 112 QLLQGLAFCHSHRVLHRDLKPENLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTL 168
Query: 133 LYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
Y APE+ L + Y VD+WS+G I E++ F G + +
Sbjct: 169 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 211
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 87.0 bits (214), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 85/165 (51%), Gaps = 12/165 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENC------IFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
EL + VNH NII L + F + +++V+E NLS I++ + +
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQME--LDHERMS 129
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVC 129
L Q+ G++ L+S IIHRDLKP NI++ D LKI DFGL+ T
Sbjct: 130 YLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFMMTPYV 186
Query: 130 GSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
+ Y APEV+ Y E VD+WSVG I+ E++ G F G +++
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHI 231
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 87.0 bits (214), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 87/163 (53%), Gaps = 8/163 (4%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHG--RVPEQTARKFLQ 73
E++ L +NHPNI++L D EN ++LV EF +L ++ +P + +L
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKDFMDASALTGIPLPLIKSYLF 110
Query: 74 QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL-YPGNYAEKVCGSP 132
QL GL +SH ++HRDLKPEN+L ++ + +K+ADFGL+ P +
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPENLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTL 167
Query: 133 LYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
Y APE+ L + Y VD+WS+G I E++ F G + +
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 87.0 bits (214), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 87/163 (53%), Gaps = 8/163 (4%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHG--RVPEQTARKFLQ 73
E++ L +NHPNI++L D EN ++LV EF +L ++ +P + +L
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 112
Query: 74 QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL-YPGNYAEKVCGSP 132
QL GL +SH ++HRDLKPEN+L ++ + +K+ADFGL+ P +
Sbjct: 113 QLLQGLAFCHSHRVLHRDLKPENLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTL 169
Query: 133 LYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
Y APE+ L + Y VD+WS+G I E++ F G + +
Sbjct: 170 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 212
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 87.0 bits (214), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 111/226 (49%), Gaps = 18/226 (7%)
Query: 1 MLKKLNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH 60
M+ + + L E+ + H N++ ++ ++ +++++EF GG L+ +
Sbjct: 77 MMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVS-Q 135
Query: 61 GRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLY 120
R+ E+ + + L L++ +IHRD+K ++ILL+ LD V K++DFG +
Sbjct: 136 VRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLT-LDGRV--KLSDFGFCAQIS 192
Query: 121 PGNYAEK-VCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV- 178
K + G+P +MAPEV+ Y +VD+WS+G ++ E+++G PP+ + VQ +
Sbjct: 193 KDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKR 252
Query: 179 ------PALH------PDCVDMCLKLLSANTVDRLSFNEFYHHRFL 212
P L P D ++L + +R + E H FL
Sbjct: 253 LRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFL 298
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 87.0 bits (214), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 89/164 (54%), Gaps = 10/164 (6%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYI---RLHGRVPEQTARKFL 72
E++ L +NHPNI++L D EN ++LV EF +L ++ L G +P + +L
Sbjct: 59 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG-IPLPLIKSYL 116
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL-YPGNYAEKVCGS 131
QL GL +SH ++HRDLKP+N+L ++ + +K+ADFGL+ P +
Sbjct: 117 FQLLQGLAFCHSHRVLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYTHEVVT 173
Query: 132 PLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
Y APE+ L + Y VD+WS+G I E++ F G + +
Sbjct: 174 LWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 217
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 87.0 bits (214), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 88/163 (53%), Gaps = 8/163 (4%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHG--RVPEQTARKFLQ 73
E++ L +NHPNI++L D EN ++LV EF + +L ++ +P + +L
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLF 112
Query: 74 QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL-YPGNYAEKVCGSP 132
QL GL +SH ++HRDLKP+N+L ++ + +K+ADFGL+ P +
Sbjct: 113 QLLQGLAFCHSHRVLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTL 169
Query: 133 LYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
Y APE+ L + Y VD+WS+G I E++ F G + +
Sbjct: 170 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 212
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 86.7 bits (213), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 88/163 (53%), Gaps = 8/163 (4%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHG--RVPEQTARKFLQ 73
E++ L +NHPNI++L D EN ++LV EF + +L ++ +P + +L
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLF 113
Query: 74 QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL-YPGNYAEKVCGSP 132
QL GL +SH ++HRDLKP+N+L ++ + +K+ADFGL+ P +
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTL 170
Query: 133 LYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
Y APE+ L + Y VD+WS+G I E++ F G + +
Sbjct: 171 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 213
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 86.7 bits (213), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 88/163 (53%), Gaps = 8/163 (4%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHG--RVPEQTARKFLQ 73
E++ L +NHPNI++L D EN ++LV EF +L +++ +P + +L
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKTFMDASALTGIPLPLIKSYLF 113
Query: 74 QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL-YPGNYAEKVCGSP 132
QL GL +SH ++HRDLKP+N+L ++ + +K+ADFGL+ P +
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTL 170
Query: 133 LYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
Y APE+ L + Y VD+WS+G I E++ F G + +
Sbjct: 171 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 213
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 89/164 (54%), Gaps = 10/164 (6%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYI---RLHGRVPEQTARKFL 72
E++ L +NHPNI++L D EN ++LV EF +L ++ L G +P + +L
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG-IPLPLIKSYL 109
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL-YPGNYAEKVCGS 131
QL GL +SH ++HRDLKP+N+L ++ + +K+ADFGL+ P +
Sbjct: 110 FQLLQGLSFCHSHRVLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYTHEVVT 166
Query: 132 PLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
Y APE+ L + Y VD+WS+G I E++ F G + +
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 81/153 (52%), Gaps = 6/153 (3%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
EL L N P I+ + AF ++ I + +E GG+L ++ R+PE+ K +
Sbjct: 64 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAV 123
Query: 76 GAGLEIL-NSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLY 134
GL L H I+HRD+KP NIL++ + +K+ DFG+S L + A G+ Y
Sbjct: 124 LRGLAYLREKHQIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLI-DSMANSFVGTRSY 179
Query: 135 MAPEVLQFQRYDEKVDMWSVGAILFELLNG-YP 166
MAPE LQ Y + D+WS+G L EL G YP
Sbjct: 180 MAPERLQGTHYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 85/165 (51%), Gaps = 12/165 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENC------IFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
EL + VNH NII L + F + +++V+E NLS I++ + +
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQME--LDHERMS 129
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVC 129
L Q+ G++ L+S IIHRDLKP NI++ D LKI DFGL+ T
Sbjct: 130 YLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFMMTPYV 186
Query: 130 GSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
+ Y APEV+ Y E VD+WSVG I+ E++ G F G +++
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI 231
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 95/173 (54%), Gaps = 9/173 (5%)
Query: 2 LKKLNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRL-H 60
L+K ++ + S E++ L + H NI++L+D + + LV E +L + +
Sbjct: 36 LEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHL-DQDLKKLLDVCE 94
Query: 61 GRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCT-- 118
G + TA+ FL QL G+ + ++HRDLKP+N+L ++ + LKIADFGL+
Sbjct: 95 GGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLL---INREGELKIADFGLARAFG 151
Query: 119 LYPGNYAEKVCGSPLYMAPEVLQ-FQRYDEKVDMWSVGAILFELLNGYPPFSG 170
+ Y +V + Y AP+VL ++Y +D+WSVG I E++NG P F G
Sbjct: 152 IPVRKYTHEVV-TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPG 203
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 89/164 (54%), Gaps = 10/164 (6%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYI---RLHGRVPEQTARKFL 72
E++ L +NHPNI++L D EN ++LV EF +L ++ L G +P + +L
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG-IPLPLIKSYL 109
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL-YPGNYAEKVCGS 131
QL GL +SH ++HRDLKP+N+L ++ + +K+ADFGL+ P +
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYTHEVVT 166
Query: 132 PLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
Y APE+ L + Y VD+WS+G I E++ F G + +
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 87/163 (53%), Gaps = 8/163 (4%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHG--RVPEQTARKFLQ 73
E++ L +NHPNI++L D EN ++LV EF +L ++ +P + +L
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 109
Query: 74 QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL-YPGNYAEKVCGSP 132
QL GL +SH ++HRDLKP+N+L ++ + +K+ADFGL+ P +
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYTHEVVTL 166
Query: 133 LYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
Y APE+ L + Y VD+WS+G I E++ F G + +
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 209
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 89/164 (54%), Gaps = 10/164 (6%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYI---RLHGRVPEQTARKFL 72
E++ L +NHPNI++L D EN ++LV EF +L ++ L G +P + +L
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG-IPLPLIKSYL 110
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL-YPGNYAEKVCGS 131
QL GL +SH ++HRDLKP+N+L ++ + +K+ADFGL+ P +
Sbjct: 111 FQLLQGLAFCHSHRVLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYTHEVVT 167
Query: 132 PLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
Y APE+ L + Y VD+WS+G I E++ F G + +
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 211
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 87/163 (53%), Gaps = 8/163 (4%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHG--RVPEQTARKFLQ 73
E++ L +NHPNI++L D EN ++LV EF +L ++ +P + +L
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 110
Query: 74 QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL-YPGNYAEKVCGSP 132
QL GL +SH ++HRDLKP+N+L ++ + +K+ADFGL+ P +
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYTHEVVTL 167
Query: 133 LYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
Y APE+ L + Y VD+WS+G I E++ F G + +
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 87/163 (53%), Gaps = 8/163 (4%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHG--RVPEQTARKFLQ 73
E++ L +NHPNI++L D EN ++LV EF +L ++ +P + +L
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 109
Query: 74 QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL-YPGNYAEKVCGSP 132
QL GL +SH ++HRDLKP+N+L ++ + +K+ADFGL+ P +
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYTHEVVTL 166
Query: 133 LYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
Y APE+ L + Y VD+WS+G I E++ F G + +
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 209
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 87/163 (53%), Gaps = 8/163 (4%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHG--RVPEQTARKFLQ 73
E++ L +NHPNI++L D EN ++LV EF +L ++ +P + +L
Sbjct: 56 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 114
Query: 74 QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL-YPGNYAEKVCGSP 132
QL GL +SH ++HRDLKP+N+L ++ + +K+ADFGL+ P +
Sbjct: 115 QLLQGLAFCHSHRVLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYTHEVVTL 171
Query: 133 LYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
Y APE+ L + Y VD+WS+G I E++ F G + +
Sbjct: 172 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 214
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 95/173 (54%), Gaps = 9/173 (5%)
Query: 2 LKKLNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRL-H 60
L+K ++ + S E++ L + H NI++L+D + + LV E +L + +
Sbjct: 36 LEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHL-DQDLKKLLDVCE 94
Query: 61 GRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCT-- 118
G + TA+ FL QL G+ + ++HRDLKP+N+L ++ + LKIADFGL+
Sbjct: 95 GGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLL---INREGELKIADFGLARAFG 151
Query: 119 LYPGNYAEKVCGSPLYMAPEVLQ-FQRYDEKVDMWSVGAILFELLNGYPPFSG 170
+ Y +V + Y AP+VL ++Y +D+WSVG I E++NG P F G
Sbjct: 152 IPVRKYTHEVV-TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPG 203
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 87/163 (53%), Gaps = 8/163 (4%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHG--RVPEQTARKFLQ 73
E++ L +NHPNI++L D EN ++LV EF +L ++ +P + +L
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 110
Query: 74 QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL-YPGNYAEKVCGSP 132
QL GL +SH ++HRDLKP+N+L ++ + +K+ADFGL+ P +
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYTHEVVTL 167
Query: 133 LYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
Y APE+ L + Y VD+WS+G I E++ F G + +
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 87/163 (53%), Gaps = 8/163 (4%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHG--RVPEQTARKFLQ 73
E++ L +NHPNI++L D EN ++LV EF +L ++ +P + +L
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 109
Query: 74 QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL-YPGNYAEKVCGSP 132
QL GL +SH ++HRDLKP+N+L ++ + +K+ADFGL+ P +
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYTHEVVTL 166
Query: 133 LYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
Y APE+ L + Y VD+WS+G I E++ F G + +
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 209
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 87/163 (53%), Gaps = 8/163 (4%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHG--RVPEQTARKFLQ 73
E++ L +NHPNI++L D EN ++LV EF +L ++ +P + +L
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 110
Query: 74 QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL-YPGNYAEKVCGSP 132
QL GL +SH ++HRDLKP+N+L ++ + +K+ADFGL+ P +
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTL 167
Query: 133 LYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
Y APE+ L + Y VD+WS+G I E++ F G + +
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 87/163 (53%), Gaps = 8/163 (4%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHG--RVPEQTARKFLQ 73
E++ L +NHPNI++L D EN ++LV EF +L ++ +P + +L
Sbjct: 59 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 117
Query: 74 QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL-YPGNYAEKVCGSP 132
QL GL +SH ++HRDLKP+N+L ++ + +K+ADFGL+ P +
Sbjct: 118 QLLQGLAFCHSHRVLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYTHEVVTL 174
Query: 133 LYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
Y APE+ L + Y VD+WS+G I E++ F G + +
Sbjct: 175 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 217
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 96/172 (55%), Gaps = 15/172 (8%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL--- 72
E+ L H NI+ LF + + + +V ++C G +L Y LH + K +
Sbjct: 81 EVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSL--YHHLHIIETKFEMIKLIDIA 137
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSC--TLYPGNYA-EKVC 129
+Q G++ L++ IIHRDLK NI L +D+ +KI DFGL+ + + G++ E++
Sbjct: 138 RQTAQGMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATVKSRWSGSHQFEQLS 194
Query: 130 GSPLYMAPEVLQFQR---YDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV 178
GS L+MAPEV++ Q Y + D+++ G +L+EL+ G P+S NN I+
Sbjct: 195 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQII 246
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 96/172 (55%), Gaps = 15/172 (8%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL--- 72
E+ L H NI+ LF + + + +V ++C G +L Y LH + K +
Sbjct: 74 EVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSL--YHHLHIIETKFEMIKLIDIA 130
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSC--TLYPGNYA-EKVC 129
+Q G++ L++ IIHRDLK NI L +D+ +KI DFGL+ + + G++ E++
Sbjct: 131 RQTAQGMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATEKSRWSGSHQFEQLS 187
Query: 130 GSPLYMAPEVLQFQR---YDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV 178
GS L+MAPEV++ Q Y + D+++ G +L+EL+ G P+S NN I+
Sbjct: 188 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQII 239
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 89/164 (54%), Gaps = 10/164 (6%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYI---RLHGRVPEQTARKFL 72
E++ L +NHPNI++L D EN ++LV EF +L ++ L G +P + +L
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG-IPLPLIKSYL 110
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL-YPGNYAEKVCGS 131
QL GL +SH ++HRDLKP+N+L ++ + +K+ADFGL+ P +
Sbjct: 111 FQLLQGLAFCHSHRVLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVT 167
Query: 132 PLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
Y APE+ L + Y VD+WS+G I E++ F G + +
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 211
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 87/163 (53%), Gaps = 8/163 (4%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHG--RVPEQTARKFLQ 73
E++ L +NHPNI++L D EN ++LV EF +L ++ +P + +L
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 110
Query: 74 QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL-YPGNYAEKVCGSP 132
QL GL +SH ++HRDLKP+N+L ++ + +K+ADFGL+ P +
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTL 167
Query: 133 LYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
Y APE+ L + Y VD+WS+G I E++ F G + +
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 87/163 (53%), Gaps = 8/163 (4%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHG--RVPEQTARKFLQ 73
E++ L +NHPNI++L D EN ++LV EF +L ++ +P + +L
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 110
Query: 74 QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL-YPGNYAEKVCGSP 132
QL GL +SH ++HRDLKP+N+L ++ + +K+ADFGL+ P +
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTL 167
Query: 133 LYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
Y APE+ L + Y VD+WS+G I E++ F G + +
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 86/156 (55%), Gaps = 9/156 (5%)
Query: 26 PNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSH 85
P ++ L AFQ E + L++++ GG L +++ R E + ++ ++ LE L+
Sbjct: 119 PFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKL 178
Query: 86 HIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY--AEKVCGSPLYMAPEVLQF- 142
II+RD+K ENIL LD + + + DFGLS A CG+ YMAP++++
Sbjct: 179 GIIYRDIKLENIL---LDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGG 235
Query: 143 -QRYDEKVDMWSVGAILFELLNGYPPFS--GRNNVQ 175
+D+ VD WS+G +++ELL G PF+ G N Q
Sbjct: 236 DSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQ 271
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 89/164 (54%), Gaps = 10/164 (6%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYI---RLHGRVPEQTARKFL 72
E++ L +NHPNI++L D EN ++LV EF +L ++ L G +P + +L
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG-IPLPLIKSYL 108
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL-YPGNYAEKVCGS 131
QL GL +SH ++HRDLKP+N+L ++ + +K+ADFGL+ P +
Sbjct: 109 FQLLQGLAFCHSHRVLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVT 165
Query: 132 PLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
Y APE+ L + Y VD+WS+G I E++ F G + +
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 209
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 96/172 (55%), Gaps = 15/172 (8%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL--- 72
E+ L H NI+ LF + + + +V ++C G +L Y LH + K +
Sbjct: 82 EVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSL--YHHLHIIETKFEMIKLIDIA 138
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSC--TLYPGNYA-EKVC 129
+Q G++ L++ IIHRDLK NI L +D+ +KI DFGL+ + + G++ E++
Sbjct: 139 RQTAQGMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATEKSRWSGSHQFEQLS 195
Query: 130 GSPLYMAPEVLQFQR---YDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV 178
GS L+MAPEV++ Q Y + D+++ G +L+EL+ G P+S NN I+
Sbjct: 196 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQII 247
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 96/172 (55%), Gaps = 15/172 (8%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL--- 72
E+ L H NI+ LF + + + +V ++C G +L Y LH + K +
Sbjct: 82 EVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSL--YHHLHIIETKFEMIKLIDIA 138
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSC--TLYPGNYA-EKVC 129
+Q G++ L++ IIHRDLK NI L +D+ +KI DFGL+ + + G++ E++
Sbjct: 139 RQTAQGMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATVKSRWSGSHQFEQLS 195
Query: 130 GSPLYMAPEVLQFQR---YDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV 178
GS L+MAPEV++ Q Y + D+++ G +L+EL+ G P+S NN I+
Sbjct: 196 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQII 247
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 87/163 (53%), Gaps = 8/163 (4%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHG--RVPEQTARKFLQ 73
E++ L +NHPNI++L D EN ++LV EF +L ++ +P + +L
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 109
Query: 74 QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL-YPGNYAEKVCGSP 132
QL GL +SH ++HRDLKP+N+L ++ + +K+ADFGL+ P +
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTL 166
Query: 133 LYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
Y APE+ L + Y VD+WS+G I E++ F G + +
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 209
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 87/163 (53%), Gaps = 8/163 (4%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHG--RVPEQTARKFLQ 73
E++ L +NHPNI++L D EN ++LV EF +L ++ +P + +L
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 113
Query: 74 QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL-YPGNYAEKVCGSP 132
QL GL +SH ++HRDLKP+N+L ++ + +K+ADFGL+ P +
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTL 170
Query: 133 LYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
Y APE+ L + Y VD+WS+G I E++ F G + +
Sbjct: 171 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 213
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 87/163 (53%), Gaps = 8/163 (4%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHG--RVPEQTARKFLQ 73
E++ L +NHPNI++L D EN ++LV EF +L ++ +P + +L
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 112
Query: 74 QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL-YPGNYAEKVCGSP 132
QL GL +SH ++HRDLKP+N+L ++ + +K+ADFGL+ P +
Sbjct: 113 QLLQGLAFCHSHRVLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTL 169
Query: 133 LYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
Y APE+ L + Y VD+WS+G I E++ F G + +
Sbjct: 170 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 212
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 87/163 (53%), Gaps = 8/163 (4%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHG--RVPEQTARKFLQ 73
E++ L +NHPNI++L D EN ++LV EF +L ++ +P + +L
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 113
Query: 74 QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL-YPGNYAEKVCGSP 132
QL GL +SH ++HRDLKP+N+L ++ + +K+ADFGL+ P +
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTL 170
Query: 133 LYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
Y APE+ L + Y VD+WS+G I E++ F G + +
Sbjct: 171 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 213
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 96/172 (55%), Gaps = 15/172 (8%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL--- 72
E+ L H NI+ LF + + + +V ++C G +L Y LH + K +
Sbjct: 59 EVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSL--YHHLHIIETKFEMIKLIDIA 115
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSC--TLYPGNYA-EKVC 129
+Q G++ L++ IIHRDLK NI L +D+ +KI DFGL+ + + G++ E++
Sbjct: 116 RQTAQGMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATVKSRWSGSHQFEQLS 172
Query: 130 GSPLYMAPEVLQFQR---YDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV 178
GS L+MAPEV++ Q Y + D+++ G +L+EL+ G P+S NN I+
Sbjct: 173 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQII 224
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 87/163 (53%), Gaps = 8/163 (4%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHG--RVPEQTARKFLQ 73
E++ L +NHPNI++L D EN ++LV EF +L ++ +P + +L
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 112
Query: 74 QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL-YPGNYAEKVCGSP 132
QL GL +SH ++HRDLKP+N+L ++ + +K+ADFGL+ P +
Sbjct: 113 QLLQGLAFCHSHRVLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTL 169
Query: 133 LYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
Y APE+ L + Y VD+WS+G I E++ F G + +
Sbjct: 170 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 212
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 96/172 (55%), Gaps = 15/172 (8%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL--- 72
E+ L H NI+ LF + + + +V ++C G +L Y LH + K +
Sbjct: 56 EVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSL--YHHLHIIETKFEMIKLIDIA 112
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSC--TLYPGNYA-EKVC 129
+Q G++ L++ IIHRDLK NI L +D+ +KI DFGL+ + + G++ E++
Sbjct: 113 RQTAQGMDYLHAKSIIHRDLKSNNIF---LHEDLTVKIGDFGLATVKSRWSGSHQFEQLS 169
Query: 130 GSPLYMAPEVLQFQR---YDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV 178
GS L+MAPEV++ Q Y + D+++ G +L+EL+ G P+S NN I+
Sbjct: 170 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQII 221
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 87/163 (53%), Gaps = 8/163 (4%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHG--RVPEQTARKFLQ 73
E++ L +NHPNI++L D EN ++LV EF +L ++ +P + +L
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 110
Query: 74 QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL-YPGNYAEKVCGSP 132
QL GL +SH ++HRDLKP+N+L ++ + +K+ADFGL+ P +
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTL 167
Query: 133 LYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
Y APE+ L + Y VD+WS+G I E++ F G + +
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 87/163 (53%), Gaps = 8/163 (4%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHG--RVPEQTARKFLQ 73
E++ L +NHPNI++L D EN ++LV EF +L ++ +P + +L
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 111
Query: 74 QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL-YPGNYAEKVCGSP 132
QL GL +SH ++HRDLKP+N+L ++ + +K+ADFGL+ P +
Sbjct: 112 QLLQGLAFCHSHRVLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTL 168
Query: 133 LYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
Y APE+ L + Y VD+WS+G I E++ F G + +
Sbjct: 169 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 211
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 92/172 (53%), Gaps = 7/172 (4%)
Query: 2 LKKLNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRL-H 60
L+K ++ + S E++ L + H NI++L+D + + LV E +L + +
Sbjct: 36 LEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHL-DQDLKKLLDVCE 94
Query: 61 GRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL- 119
G + TA+ FL QL G+ + ++HRDLKP+N+L ++ + LKIADFGL+
Sbjct: 95 GGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLL---INREGELKIADFGLARAFG 151
Query: 120 YPGNYAEKVCGSPLYMAPEVLQ-FQRYDEKVDMWSVGAILFELLNGYPPFSG 170
P + Y AP+VL ++Y +D+WSVG I E++NG P F G
Sbjct: 152 IPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPG 203
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 87/163 (53%), Gaps = 8/163 (4%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHG--RVPEQTARKFLQ 73
E++ L +NHPNI++L D EN ++LV EF +L ++ +P + +L
Sbjct: 56 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 114
Query: 74 QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL-YPGNYAEKVCGSP 132
QL GL +SH ++HRDLKP+N+L ++ + +K+ADFGL+ P +
Sbjct: 115 QLLQGLAFCHSHRVLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTL 171
Query: 133 LYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
Y APE+ L + Y VD+WS+G I E++ F G + +
Sbjct: 172 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 214
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 93/172 (54%), Gaps = 17/172 (9%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCI----FLVVEFCAGGNLSSYIRLHGRVPEQTARKF 71
E +++NHP I+ ++ +AE ++V+E+ G L + G + T ++
Sbjct: 62 EAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM---TPKRA 118
Query: 72 LQQLGAGLEILNSHH---IIHRDLKPENILLSGLDDDVMLKIADFGLSCTLY-PGNYAEK 127
++ + + LN H IIHRD+KP NI++S + +K+ DFG++ + GN +
Sbjct: 119 IEVIADACQALNFSHQNGIIHRDVKPANIMISATN---AVKVMDFGIARAIADSGNSVTQ 175
Query: 128 ---VCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQL 176
V G+ Y++PE + D + D++S+G +L+E+L G PPF+G + V +
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV 227
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 87/153 (56%), Gaps = 5/153 (3%)
Query: 17 LNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQLG 76
L+ +S+ + P I+ + AF + + +++ GG+L ++ HG E R + ++
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEII 302
Query: 77 AGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMA 136
GLE +++ +++RDLKP NIL LD+ ++I+D GL+C + G+ YMA
Sbjct: 303 LGLEHMHNRFVVYRDLKPANIL---LDEHGHVRISDLGLACD-FSKKKPHASVGTHGYMA 358
Query: 137 PEVLQFQ-RYDEKVDMWSVGAILFELLNGYPPF 168
PEVLQ YD D +S+G +LF+LL G+ PF
Sbjct: 359 PEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 87/153 (56%), Gaps = 5/153 (3%)
Query: 17 LNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQLG 76
L+ +S+ + P I+ + AF + + +++ GG+L ++ HG E R + ++
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEII 302
Query: 77 AGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMA 136
GLE +++ +++RDLKP NIL LD+ ++I+D GL+C + G+ YMA
Sbjct: 303 LGLEHMHNRFVVYRDLKPANIL---LDEHGHVRISDLGLACD-FSKKKPHASVGTHGYMA 358
Query: 137 PEVLQFQ-RYDEKVDMWSVGAILFELLNGYPPF 168
PEVLQ YD D +S+G +LF+LL G+ PF
Sbjct: 359 PEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 85/165 (51%), Gaps = 12/165 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENC------IFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
EL + VNH NII L + F + +++V+E NLS I++ + +
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQME--LDHERMS 129
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVC 129
L Q+ G++ L+S IIHRDLKP NI++ D LKI DFGL+ T
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFMMTPYV 186
Query: 130 GSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
+ Y APEV+ Y E VD+WSVG I+ E++ G F G +++
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI 231
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 87/153 (56%), Gaps = 5/153 (3%)
Query: 17 LNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQLG 76
L+ +S+ + P I+ + AF + + +++ GG+L ++ HG E R + ++
Sbjct: 242 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEII 301
Query: 77 AGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMA 136
GLE +++ +++RDLKP NIL LD+ ++I+D GL+C + G+ YMA
Sbjct: 302 LGLEHMHNRFVVYRDLKPANIL---LDEHGHVRISDLGLACD-FSKKKPHASVGTHGYMA 357
Query: 137 PEVLQFQ-RYDEKVDMWSVGAILFELLNGYPPF 168
PEVLQ YD D +S+G +LF+LL G+ PF
Sbjct: 358 PEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 390
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 96/172 (55%), Gaps = 15/172 (8%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL--- 72
E+ L H NI+ LF + + + +V ++C G +L Y LH + K +
Sbjct: 54 EVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSL--YHHLHIIETKFEMIKLIDIA 110
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSC--TLYPGNYA-EKVC 129
+Q G++ L++ IIHRDLK NI L +D+ +KI DFGL+ + + G++ E++
Sbjct: 111 RQTAQGMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATEKSRWSGSHQFEQLS 167
Query: 130 GSPLYMAPEVLQFQR---YDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV 178
GS L+MAPEV++ Q Y + D+++ G +L+EL+ G P+S NN I+
Sbjct: 168 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQII 219
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 96/172 (55%), Gaps = 15/172 (8%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL--- 72
E+ L H NI+ LF + + + +V ++C G +L Y LH + K +
Sbjct: 59 EVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSL--YHHLHIIETKFEMIKLIDIA 115
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSC--TLYPGNYA-EKVC 129
+Q G++ L++ IIHRDLK NI L +D+ +KI DFGL+ + + G++ E++
Sbjct: 116 RQTAQGMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATVKSRWSGSHQFEQLS 172
Query: 130 GSPLYMAPEVLQFQR---YDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV 178
GS L+MAPEV++ Q Y + D+++ G +L+EL+ G P+S NN I+
Sbjct: 173 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQII 224
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 19/185 (10%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAE------NCIFLVVEFCAG 50
+KKL++ +S + EL L + H N+I L D F N ++LV G
Sbjct: 52 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-G 110
Query: 51 GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
+L++ ++ ++ + + + Q+ GL+ ++S IIHRDLKP N+ +++D LKI
Sbjct: 111 ADLNNIVKXQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDXELKI 166
Query: 111 ADFGLSCTLYPGNYAEKVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
DFGL+ + + + Y APE+ L + Y++ VD+WSVG I+ ELL G F
Sbjct: 167 LDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
Query: 170 GRNNV 174
G +++
Sbjct: 225 GTDHI 229
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 85/165 (51%), Gaps = 12/165 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENC------IFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
EL + VNH NII L + F + +++V+E NLS I++ + +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQME--LDHERMS 129
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVC 129
L Q+ G++ L+S IIHRDLKP NI++ D LKI DFGL+ T
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFMMTPYV 186
Query: 130 GSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
+ Y APEV+ Y E VD+WSVG I+ E++ G F G +++
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI 231
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 96/172 (55%), Gaps = 15/172 (8%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL--- 72
E+ L H NI+ LF + + + +V ++C G +L Y LH + K +
Sbjct: 54 EVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSL--YHHLHIIETKFEMIKLIDIA 110
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSC--TLYPGNYA-EKVC 129
+Q G++ L++ IIHRDLK NI L +D+ +KI DFGL+ + + G++ E++
Sbjct: 111 RQTAQGMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATVKSRWSGSHQFEQLS 167
Query: 130 GSPLYMAPEVLQFQR---YDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV 178
GS L+MAPEV++ Q Y + D+++ G +L+EL+ G P+S NN I+
Sbjct: 168 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQII 219
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 87/153 (56%), Gaps = 5/153 (3%)
Query: 17 LNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQLG 76
L+ +S+ + P I+ + AF + + +++ GG+L ++ HG E R + ++
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEII 302
Query: 77 AGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMA 136
GLE +++ +++RDLKP NIL LD+ ++I+D GL+C + G+ YMA
Sbjct: 303 LGLEHMHNRFVVYRDLKPANIL---LDEHGHVRISDLGLACD-FSKKKPHASVGTHGYMA 358
Query: 137 PEVLQFQ-RYDEKVDMWSVGAILFELLNGYPPF 168
PEVLQ YD D +S+G +LF+LL G+ PF
Sbjct: 359 PEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 73/126 (57%), Gaps = 5/126 (3%)
Query: 39 NCIFLVVEFCAGGNLSSYI--RLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPEN 96
C+F+ +EFC G L +I R ++ + A + +Q+ G++ ++S +IHRDLKP N
Sbjct: 107 KCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSN 166
Query: 97 ILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVLQFQRYDEKVDMWSVGA 156
I L D +KI DFGL +L + G+ YM+PE + Q Y ++VD++++G
Sbjct: 167 IFLV---DTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGL 223
Query: 157 ILFELL 162
IL ELL
Sbjct: 224 ILAELL 229
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 83/160 (51%), Gaps = 8/160 (5%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
EL + + P I+ L+ A + + + +E GG+L ++ G +PE A +L Q
Sbjct: 135 ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQA 194
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEK------VC 129
GLE L+S I+H D+K +N+LLS D + DFG + L P + +
Sbjct: 195 LEGLEYLHSRRILHGDVKADNVLLS--SDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIP 252
Query: 130 GSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
G+ +MAPEV+ + D KVD+WS ++ +LNG P++
Sbjct: 253 GTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWT 292
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 98/185 (52%), Gaps = 19/185 (10%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAE------NCIFLVVEFCAG 50
+KKL+K +S + EL L + H N+I L D F N ++LV G
Sbjct: 64 VKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-G 122
Query: 51 GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
+L++ ++ ++ + + + Q+ GL+ ++S IIHRDLKP N+ +++D LKI
Sbjct: 123 ADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKI 178
Query: 111 ADFGLSCTLYPGNYAEKVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
DFGL+ + + + Y APE+ L + Y++ VD+WSVG I+ ELL G F
Sbjct: 179 LDFGLA--RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 236
Query: 170 GRNNV 174
G +++
Sbjct: 237 GTDHI 241
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 19/185 (10%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAE------NCIFLVVEFCAG 50
+KKL++ +S + EL L + H N+I L D F N ++LV G
Sbjct: 59 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-G 117
Query: 51 GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
+L++ ++ ++ + + + Q+ GL+ ++S IIHRDLKP N+ +++D LKI
Sbjct: 118 ADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKI 173
Query: 111 ADFGLSCTLYPGNYAEKVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
DFGL+ + + + Y APE+ L + Y++ VD+WSVG I+ ELL G F
Sbjct: 174 LDFGLA--RHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 231
Query: 170 GRNNV 174
G +++
Sbjct: 232 GTDHI 236
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 19/185 (10%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAE------NCIFLVVEFCAG 50
+KKL++ +S + EL L + H N+I L D F N ++LV G
Sbjct: 59 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-G 117
Query: 51 GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
+L++ ++ ++ + + + Q+ GL+ ++S IIHRDLKP N+ +++D LKI
Sbjct: 118 ADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKI 173
Query: 111 ADFGLSCTLYPGNYAEKVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
DFGL+ + + + Y APE+ L + Y++ VD+WSVG I+ ELL G F
Sbjct: 174 LDFGLA--RHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 231
Query: 170 GRNNV 174
G +++
Sbjct: 232 GTDHI 236
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 84/160 (52%), Gaps = 8/160 (5%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
EL + ++ P I+ L+ A + + + +E GG+L I+ G +PE A +L Q
Sbjct: 100 ELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQA 159
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEK------VC 129
GLE L++ I+H D+K +N+LLS D + DFG + L P + +
Sbjct: 160 LEGLEYLHTRRILHGDVKADNVLLS--SDGSRAALCDFGHALCLQPDGLGKSLLTGDYIP 217
Query: 130 GSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
G+ +MAPEV+ + D KVD+WS ++ +LNG P++
Sbjct: 218 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWT 257
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 83/160 (51%), Gaps = 8/160 (5%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
EL + + P I+ L+ A + + + +E GG+L ++ G +PE A +L Q
Sbjct: 116 ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQA 175
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEK------VC 129
GLE L+S I+H D+K +N+LLS D + DFG + L P + +
Sbjct: 176 LEGLEYLHSRRILHGDVKADNVLLS--SDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIP 233
Query: 130 GSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
G+ +MAPEV+ + D KVD+WS ++ +LNG P++
Sbjct: 234 GTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWT 273
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 84/160 (52%), Gaps = 8/160 (5%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
EL + ++ P I+ L+ A + + + +E GG+L I+ G +PE A +L Q
Sbjct: 116 ELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQA 175
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEK------VC 129
GLE L++ I+H D+K +N+LLS D + DFG + L P + +
Sbjct: 176 LEGLEYLHTRRILHGDVKADNVLLS--SDGSRAALCDFGHALCLQPDGLGKSLLTGDYIP 233
Query: 130 GSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
G+ +MAPEV+ + D KVD+WS ++ +LNG P++
Sbjct: 234 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWT 273
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 19/185 (10%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAE------NCIFLVVEFCAG 50
+KKL++ +S + EL L + H N+I L D F N ++LV G
Sbjct: 59 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-G 117
Query: 51 GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
+L++ ++ ++ + + + Q+ GL+ ++S IIHRDLKP N+ +++D LKI
Sbjct: 118 ADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKI 173
Query: 111 ADFGLSCTLYPGNYAEKVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
DFGL+ + + + Y APE+ L + Y++ VD+WSVG I+ ELL G F
Sbjct: 174 LDFGLA--RHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 231
Query: 170 GRNNV 174
G +++
Sbjct: 232 GTDHI 236
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 19/185 (10%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAE------NCIFLVVEFCAG 50
+KKL++ +S + EL L + H N+I L D F N ++LV G
Sbjct: 52 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-G 110
Query: 51 GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
+L++ ++ ++ + + + Q+ GL+ ++S IIHRDLKP N+ +++D LKI
Sbjct: 111 ADLNNIVKXQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKI 166
Query: 111 ADFGLSCTLYPGNYAEKVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
DFGL+ + + + Y APE+ L + Y++ VD+WSVG I+ ELL G F
Sbjct: 167 LDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
Query: 170 GRNNV 174
G +++
Sbjct: 225 GTDHI 229
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 85/165 (51%), Gaps = 12/165 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENC------IFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
EL + VNH NII L + F + +++V+E NLS I++ + +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQME--LDHERMS 129
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVC 129
L Q+ G++ L+S IIHRDLKP NI++ D LKI DFGL+ T
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYV 186
Query: 130 GSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
+ Y APEV+ Y E VD+WSVG I+ E++ G F G +++
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI 231
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 19/185 (10%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAE------NCIFLVVEFCAG 50
+KKL++ +S + EL L + H N+I L D F N ++LV G
Sbjct: 48 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-G 106
Query: 51 GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
+L++ ++ ++ + + + Q+ GL+ ++S IIHRDLKP N+ +++D LKI
Sbjct: 107 ADLNNIVKC-AKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKI 162
Query: 111 ADFGLSCTLYPGNYAEKVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
DFGL+ + + + Y APE+ L + Y++ VD+WSVG I+ ELL G F
Sbjct: 163 LDFGLA--RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 220
Query: 170 GRNNV 174
G +++
Sbjct: 221 GTDHI 225
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 84/160 (52%), Gaps = 8/160 (5%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
EL + ++ P I+ L+ A + + + +E GG+L I+ G +PE A +L Q
Sbjct: 114 ELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQA 173
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEK------VC 129
GLE L++ I+H D+K +N+LLS D + DFG + L P + +
Sbjct: 174 LEGLEYLHTRRILHGDVKADNVLLS--SDGSRAALCDFGHALCLQPDGLGKSLLTGDYIP 231
Query: 130 GSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
G+ +MAPEV+ + D KVD+WS ++ +LNG P++
Sbjct: 232 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWT 271
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 95/172 (55%), Gaps = 15/172 (8%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL--- 72
E+ L H NI+ LF + + +V ++C G +L Y LH + K +
Sbjct: 54 EVGVLRKTRHVNIL-LFMGYSTAPQLAIVTQWCEGSSL--YHHLHIIETKFEMIKLIDIA 110
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSC--TLYPGNYA-EKVC 129
+Q G++ L++ IIHRDLK NI L +D+ +KI DFGL+ + + G++ E++
Sbjct: 111 RQTAQGMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATVKSRWSGSHQFEQLS 167
Query: 130 GSPLYMAPEVLQFQR---YDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV 178
GS L+MAPEV++ Q Y + D+++ G +L+EL+ G P+S NN I+
Sbjct: 168 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQII 219
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 19/185 (10%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAE------NCIFLVVEFCAG 50
+KKL++ +S + EL L + H N+I L D F N ++LV G
Sbjct: 57 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-G 115
Query: 51 GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
+L++ ++ ++ + + + Q+ GL+ ++S IIHRDLKP N+ +++D LKI
Sbjct: 116 ADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDXELKI 171
Query: 111 ADFGLSCTLYPGNYAEKVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
DFGL+ + + + Y APE+ L + Y++ VD+WSVG I+ ELL G F
Sbjct: 172 LDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 229
Query: 170 GRNNV 174
G +++
Sbjct: 230 GTDHI 234
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 19/185 (10%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAE------NCIFLVVEFCAG 50
+KKL++ +S + EL L + H N+I L D F N ++LV G
Sbjct: 57 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-G 115
Query: 51 GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
+L++ ++ ++ + + + Q+ GL+ ++S IIHRDLKP N+ +++D LKI
Sbjct: 116 ADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDXELKI 171
Query: 111 ADFGLSCTLYPGNYAEKVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
DFGL+ + + + Y APE+ L + Y++ VD+WSVG I+ ELL G F
Sbjct: 172 LDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 229
Query: 170 GRNNV 174
G +++
Sbjct: 230 GTDHI 234
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 93/181 (51%), Gaps = 24/181 (13%)
Query: 11 SCLDCELNFLSSV-NHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH--------- 60
S L E+ + + H NII L A + ++++VE+ + GNL Y+R
Sbjct: 72 SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY 131
Query: 61 --GRVPEQ--TARKFLQ---QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADF 113
RVPE+ T + + QL G+E L S IHRDL N+L++ ++ ++KIADF
Sbjct: 132 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVT---ENNVMKIADF 188
Query: 114 GLSCTLYPGNYAEKVCGSPL---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFS 169
GL+ + +Y +K L +MAPE L + Y + D+WS G +++E+ G P+
Sbjct: 189 GLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP 248
Query: 170 G 170
G
Sbjct: 249 G 249
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 19/185 (10%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAE------NCIFLVVEFCAG 50
+KKL++ +S + EL L + H N+I L D F N ++LV G
Sbjct: 58 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-G 116
Query: 51 GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
+L++ ++ ++ + + + Q+ GL+ ++S IIHRDLKP N+ +++D LKI
Sbjct: 117 ADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKI 172
Query: 111 ADFGLSCTLYPGNYAEKVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
DFGL+ + + + Y APE+ L + Y++ VD+WSVG I+ ELL G F
Sbjct: 173 LDFGLA--RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 230
Query: 170 GRNNV 174
G +++
Sbjct: 231 GTDHI 235
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 19/185 (10%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAE------NCIFLVVEFCAG 50
+KKL++ +S + EL L + H N+I L D F N ++LV G
Sbjct: 52 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-G 110
Query: 51 GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
+L++ ++ ++ + + + Q+ GL+ ++S IIHRDLKP N+ +++D LKI
Sbjct: 111 ADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKI 166
Query: 111 ADFGLSCTLYPGNYAEKVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
DFGL+ + + + Y APE+ L + Y++ VD+WSVG I+ ELL G F
Sbjct: 167 LDFGLA--RHTDDEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
Query: 170 GRNNV 174
G +++
Sbjct: 225 GTDHI 229
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 93/181 (51%), Gaps = 24/181 (13%)
Query: 11 SCLDCELNFLSSV-NHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH--------- 60
S L E+ + + H NII L A + ++++VE+ + GNL Y+R
Sbjct: 131 SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY 190
Query: 61 --GRVPEQ--TARKFLQ---QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADF 113
RVPE+ T + + QL G+E L S IHRDL N+L++ ++ ++KIADF
Sbjct: 191 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADF 247
Query: 114 GLSCTLYPGNYAEKVCGSPL---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFS 169
GL+ + +Y +K L +MAPE L + Y + D+WS G +++E+ G P+
Sbjct: 248 GLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP 307
Query: 170 G 170
G
Sbjct: 308 G 308
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 19/185 (10%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAE------NCIFLVVEFCAG 50
+KKL++ +S + EL L + H N+I L D F N ++LV G
Sbjct: 58 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-G 116
Query: 51 GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
+L++ ++ ++ + + + Q+ GL+ ++S IIHRDLKP N+ +++D LKI
Sbjct: 117 ADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDSELKI 172
Query: 111 ADFGLSCTLYPGNYAEKVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
DFGL+ + + + Y APE+ L + Y++ VD+WSVG I+ ELL G F
Sbjct: 173 LDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 230
Query: 170 GRNNV 174
G +++
Sbjct: 231 GTDHI 235
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 87/165 (52%), Gaps = 21/165 (12%)
Query: 16 ELNFLSSVNHPNIIRL---FDAFQAE-------------NCIFLVVEFCAGGNLSSYI-- 57
E+ L+ ++H NI+ +D F + C+F+ +EFC G L +I
Sbjct: 54 EVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEK 113
Query: 58 RLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSC 117
R ++ + A + +Q+ G++ ++S +I+RDLKP NI L D +KI DFGL
Sbjct: 114 RRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLV---DTKQVKIGDFGLVT 170
Query: 118 TLYPGNYAEKVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELL 162
+L + G+ YM+PE + Q Y ++VD++++G IL ELL
Sbjct: 171 SLKNDGKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 93/181 (51%), Gaps = 24/181 (13%)
Query: 11 SCLDCELNFLSSV-NHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH--------- 60
S L E+ + + H NII L A + ++++VE+ + GNL Y+R
Sbjct: 85 SDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY 144
Query: 61 --GRVPEQ--TARKFLQ---QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADF 113
RVPE+ T + + QL G+E L S IHRDL N+L++ ++ ++KIADF
Sbjct: 145 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADF 201
Query: 114 GLSCTLYPGNYAEKVCGSPL---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFS 169
GL+ + +Y +K L +MAPE L + Y + D+WS G +++E+ G P+
Sbjct: 202 GLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP 261
Query: 170 G 170
G
Sbjct: 262 G 262
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 111/219 (50%), Gaps = 30/219 (13%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRL---HGRV----PEQTA 68
E + + HPN++ L + + ++ +C+ G+L ++ + H V ++T
Sbjct: 62 EAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTV 121
Query: 69 RKFLQ---------QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL 119
+ L+ Q+ AG+E L+SHH++H+DL N+L+ D + +KI+D GL +
Sbjct: 122 KSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVY---DKLNVKISDLGLFREV 178
Query: 120 YPGNYAEKVCGSPL----YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNN- 173
Y +Y K+ G+ L +MAPE + + ++ D+WS G +L+E+ + G P+ G +N
Sbjct: 179 YAADYY-KLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ 237
Query: 174 --VQLIVPALHPDCVDMCLKLLSANTVDRLSFNEFYHHR 210
V++I C D C + A ++ +NEF R
Sbjct: 238 DVVEMIRNRQVLPCPDDCPAWVYALMIE--CWNEFPSRR 274
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 19/185 (10%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAE------NCIFLVVEFCAG 50
+KKL++ +S + EL L + H N+I L D F N ++LV G
Sbjct: 63 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-G 121
Query: 51 GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
+L++ ++ ++ + + + Q+ GL+ ++S IIHRDLKP N+ +++D LKI
Sbjct: 122 ADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDXELKI 177
Query: 111 ADFGLSCTLYPGNYAEKVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
DFGL+ + + + Y APE+ L + Y++ VD+WSVG I+ ELL G F
Sbjct: 178 LDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 235
Query: 170 GRNNV 174
G +++
Sbjct: 236 GTDHI 240
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 19/185 (10%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAE------NCIFLVVEFCAG 50
+KKL++ +S + EL L + H N+I L D F N ++LV G
Sbjct: 58 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-G 116
Query: 51 GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
+L++ ++ ++ + + + Q+ GL+ ++S IIHRDLKP N+ +++D LKI
Sbjct: 117 ADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKI 172
Query: 111 ADFGLSCTLYPGNYAEKVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
DFGL+ + + + Y APE+ L + Y++ VD+WSVG I+ ELL G F
Sbjct: 173 LDFGLA--RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 230
Query: 170 GRNNV 174
G +++
Sbjct: 231 GTDHI 235
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 19/185 (10%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAE------NCIFLVVEFCAG 50
+KKL++ +S + EL L + H N+I L D F N ++LV G
Sbjct: 48 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-G 106
Query: 51 GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
+L++ ++ ++ + + + Q+ GL+ ++S IIHRDLKP N+ +++D LKI
Sbjct: 107 ADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKI 162
Query: 111 ADFGLSCTLYPGNYAEKVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
DFGL+ + + + Y APE+ L + Y++ VD+WSVG I+ ELL G F
Sbjct: 163 LDFGLA--RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 220
Query: 170 GRNNV 174
G +++
Sbjct: 221 GTDHI 225
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 111/219 (50%), Gaps = 30/219 (13%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRL---HGRV----PEQTA 68
E + + HPN++ L + + ++ +C+ G+L ++ + H V ++T
Sbjct: 79 EAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTV 138
Query: 69 RKFLQ---------QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL 119
+ L+ Q+ AG+E L+SHH++H+DL N+L+ D + +KI+D GL +
Sbjct: 139 KSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVY---DKLNVKISDLGLFREV 195
Query: 120 YPGNYAEKVCGSPL----YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNN- 173
Y +Y K+ G+ L +MAPE + + ++ D+WS G +L+E+ + G P+ G +N
Sbjct: 196 YAADYY-KLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ 254
Query: 174 --VQLIVPALHPDCVDMCLKLLSANTVDRLSFNEFYHHR 210
V++I C D C + A ++ +NEF R
Sbjct: 255 DVVEMIRNRQVLPCPDDCPAWVYALMIE--CWNEFPSRR 291
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 19/185 (10%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAE------NCIFLVVEFCAG 50
+KKL++ +S + EL L + H N+I L D F N ++LV G
Sbjct: 54 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-G 112
Query: 51 GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
+L++ ++ ++ + + + Q+ GL+ ++S IIHRDLKP N+ +++D LKI
Sbjct: 113 ADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDSELKI 168
Query: 111 ADFGLSCTLYPGNYAEKVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
DFGL+ + + + Y APE+ L + Y++ VD+WSVG I+ ELL G F
Sbjct: 169 LDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 226
Query: 170 GRNNV 174
G +++
Sbjct: 227 GTDHI 231
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 19/185 (10%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAE------NCIFLVVEFCAG 50
+KKL++ +S + EL L + H N+I L D F N ++LV G
Sbjct: 57 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-G 115
Query: 51 GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
+L++ ++ ++ + + + Q+ GL+ ++S IIHRDLKP N+ +++D LKI
Sbjct: 116 ADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKI 171
Query: 111 ADFGLSCTLYPGNYAEKVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
DFGL+ + + + Y APE+ L + Y++ VD+WSVG I+ ELL G F
Sbjct: 172 LDFGLA--RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 229
Query: 170 GRNNV 174
G +++
Sbjct: 230 GTDHI 234
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 19/185 (10%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAE------NCIFLVVEFCAG 50
+KKL++ +S + EL L + H N+I L D F N ++LV G
Sbjct: 48 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-G 106
Query: 51 GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
+L++ ++ ++ + + + Q+ GL+ ++S IIHRDLKP N+ +++D LKI
Sbjct: 107 ADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKI 162
Query: 111 ADFGLSCTLYPGNYAEKVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
DFGL+ + + + Y APE+ L + Y++ VD+WSVG I+ ELL G F
Sbjct: 163 LDFGLA--RHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 220
Query: 170 GRNNV 174
G +++
Sbjct: 221 GTDHI 225
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 19/185 (10%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAE------NCIFLVVEFCAG 50
+KKL++ +S + EL L + H N+I L D F N ++LV G
Sbjct: 52 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-G 110
Query: 51 GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
+L++ ++ ++ + + + Q+ GL+ ++S IIHRDLKP N+ +++D LKI
Sbjct: 111 ADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKI 166
Query: 111 ADFGLSCTLYPGNYAEKVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
DFGL+ + + + Y APE+ L + Y++ VD+WSVG I+ ELL G F
Sbjct: 167 LDFGLA--RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
Query: 170 GRNNV 174
G +++
Sbjct: 225 GTDHI 229
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 19/185 (10%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAE------NCIFLVVEFCAG 50
+KKL++ +S + EL L + H N+I L D F N ++LV G
Sbjct: 59 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-G 117
Query: 51 GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
+L++ ++ ++ + + + Q+ GL+ ++S IIHRDLKP N+ +++D LKI
Sbjct: 118 ADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKI 173
Query: 111 ADFGLSCTLYPGNYAEKVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
DFGL+ + + + Y APE+ L + Y++ VD+WSVG I+ ELL G F
Sbjct: 174 LDFGLA--RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 231
Query: 170 GRNNV 174
G +++
Sbjct: 232 GTDHI 236
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 93/181 (51%), Gaps = 24/181 (13%)
Query: 11 SCLDCELNFLSSV-NHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH--------- 60
S L E+ + + H NII L A + ++++VE+ + GNL Y+R
Sbjct: 85 SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY 144
Query: 61 --GRVPEQ--TARKFLQ---QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADF 113
RVPE+ T + + QL G+E L S IHRDL N+L++ ++ ++KIADF
Sbjct: 145 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADF 201
Query: 114 GLSCTLYPGNYAEKVCGSPL---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFS 169
GL+ + +Y +K L +MAPE L + Y + D+WS G +++E+ G P+
Sbjct: 202 GLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP 261
Query: 170 G 170
G
Sbjct: 262 G 262
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 93/181 (51%), Gaps = 24/181 (13%)
Query: 11 SCLDCELNFLSSV-NHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH--------- 60
S L E+ + + H NII L A + ++++VE+ + GNL Y+R
Sbjct: 77 SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY 136
Query: 61 --GRVPEQ--TARKFLQ---QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADF 113
RVPE+ T + + QL G+E L S IHRDL N+L++ ++ ++KIADF
Sbjct: 137 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADF 193
Query: 114 GLSCTLYPGNYAEKVCGSPL---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFS 169
GL+ + +Y +K L +MAPE L + Y + D+WS G +++E+ G P+
Sbjct: 194 GLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP 253
Query: 170 G 170
G
Sbjct: 254 G 254
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 93/181 (51%), Gaps = 24/181 (13%)
Query: 11 SCLDCELNFLSSV-NHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH--------- 60
S L E+ + + H NII L A + ++++VE+ + GNL Y+R
Sbjct: 85 SDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY 144
Query: 61 --GRVPEQ--TARKFLQ---QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADF 113
RVPE+ T + + QL G+E L S IHRDL N+L++ ++ ++KIADF
Sbjct: 145 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADF 201
Query: 114 GLSCTLYPGNYAEKVCGSPL---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFS 169
GL+ + +Y +K L +MAPE L + Y + D+WS G +++E+ G P+
Sbjct: 202 GLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP 261
Query: 170 G 170
G
Sbjct: 262 G 262
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 19/185 (10%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAE------NCIFLVVEFCAG 50
+KKL++ +S + EL L + H N+I L D F N ++LV G
Sbjct: 49 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-G 107
Query: 51 GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
+L++ ++ ++ + + + Q+ GL+ ++S IIHRDLKP N+ +++D LKI
Sbjct: 108 ADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKI 163
Query: 111 ADFGLSCTLYPGNYAEKVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
DFGL+ + + + Y APE+ L + Y++ VD+WSVG I+ ELL G F
Sbjct: 164 LDFGLA--RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 221
Query: 170 GRNNV 174
G +++
Sbjct: 222 GTDHI 226
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 19/185 (10%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAE------NCIFLVVEFCAG 50
+KKL++ +S + EL L + H N+I L D F N ++LV G
Sbjct: 49 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-G 107
Query: 51 GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
+L++ ++ ++ + + + Q+ GL+ ++S IIHRDLKP N+ +++D LKI
Sbjct: 108 ADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKI 163
Query: 111 ADFGLSCTLYPGNYAEKVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
DFGL+ + + + Y APE+ L + Y++ VD+WSVG I+ ELL G F
Sbjct: 164 LDFGLA--RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 221
Query: 170 GRNNV 174
G +++
Sbjct: 222 GTDHI 226
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 19/185 (10%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAE------NCIFLVVEFCAG 50
+KKL++ +S + EL L + H N+I L D F N ++LV G
Sbjct: 52 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-G 110
Query: 51 GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
+L++ ++ ++ + + + Q+ GL+ ++S IIHRDLKP N+ +++D LKI
Sbjct: 111 ADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKI 166
Query: 111 ADFGLSCTLYPGNYAEKVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
DFGL+ + + + Y APE+ L + Y++ VD+WSVG I+ ELL G F
Sbjct: 167 LDFGLA--RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
Query: 170 GRNNV 174
G +++
Sbjct: 225 GTDHI 229
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 19/185 (10%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAE------NCIFLVVEFCAG 50
+KKL++ +S + EL L + H N+I L D F N ++LV G
Sbjct: 52 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-G 110
Query: 51 GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
+L++ ++ ++ + + + Q+ GL+ ++S IIHRDLKP N+ +++D LKI
Sbjct: 111 ADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKI 166
Query: 111 ADFGLSCTLYPGNYAEKVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
DFGL+ + + + Y APE+ L + Y++ VD+WSVG I+ ELL G F
Sbjct: 167 LDFGLA--RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
Query: 170 GRNNV 174
G +++
Sbjct: 225 GTDHI 229
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 19/185 (10%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAE------NCIFLVVEFCAG 50
+KKL++ +S + EL L + H N+I L D F N ++LV G
Sbjct: 52 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-G 110
Query: 51 GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
+L++ ++ ++ + + + Q+ GL+ ++S IIHRDLKP N+ +++D LKI
Sbjct: 111 ADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKI 166
Query: 111 ADFGLSCTLYPGNYAEKVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
DFGL+ + + + Y APE+ L + Y++ VD+WSVG I+ ELL G F
Sbjct: 167 LDFGLA--RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
Query: 170 GRNNV 174
G +++
Sbjct: 225 GTDHI 229
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 19/185 (10%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAE------NCIFLVVEFCAG 50
+KKL++ +S + EL L + H N+I L D F N ++LV G
Sbjct: 58 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-G 116
Query: 51 GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
+L++ ++ ++ + + + Q+ GL+ ++S IIHRDLKP N+ +++D LKI
Sbjct: 117 ADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKI 172
Query: 111 ADFGLSCTLYPGNYAEKVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
DFGL+ + + + Y APE+ L + Y++ VD+WSVG I+ ELL G F
Sbjct: 173 LDFGLA--RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 230
Query: 170 GRNNV 174
G +++
Sbjct: 231 GTDHI 235
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 19/185 (10%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAE------NCIFLVVEFCAG 50
+KKL++ +S + EL L + H N+I L D F N ++LV G
Sbjct: 48 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-G 106
Query: 51 GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
+L++ ++ ++ + + + Q+ GL+ ++S IIHRDLKP N+ +++D LKI
Sbjct: 107 ADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKI 162
Query: 111 ADFGLSCTLYPGNYAEKVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
DFGL+ + + + Y APE+ L + Y++ VD+WSVG I+ ELL G F
Sbjct: 163 LDFGLA--RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 220
Query: 170 GRNNV 174
G +++
Sbjct: 221 GTDHI 225
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 87/163 (53%), Gaps = 8/163 (4%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHG--RVPEQTARKFLQ 73
E++ L +NHPNI++L D EN ++LV E +L +++ +P + +L
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEHVHQ-DLKTFMDASALTGIPLPLIKSYLF 109
Query: 74 QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL-YPGNYAEKVCGSP 132
QL GL +SH ++HRDLKP+N+L ++ + +K+ADFGL+ P +
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYTHEVVTL 166
Query: 133 LYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
Y APE+ L + Y VD+WS+G I E++ F G + +
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 209
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 19/185 (10%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAE------NCIFLVVEFCAG 50
+KKL++ +S + EL L + H N+I L D F N ++LV G
Sbjct: 52 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-G 110
Query: 51 GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
+L++ ++ ++ + + + Q+ GL+ ++S IIHRDLKP N+ +++D LKI
Sbjct: 111 ADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKI 166
Query: 111 ADFGLSCTLYPGNYAEKVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
DFGL+ + + + Y APE+ L + Y++ VD+WSVG I+ ELL G F
Sbjct: 167 LDFGLA--RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
Query: 170 GRNNV 174
G +++
Sbjct: 225 GTDHI 229
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 84.3 bits (207), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 19/185 (10%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAE------NCIFLVVEFCAG 50
+KKL++ +S + EL L + H N+I L D F N ++LV G
Sbjct: 54 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-G 112
Query: 51 GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
+L++ ++ ++ + + + Q+ GL+ ++S IIHRDLKP N+ +++D LKI
Sbjct: 113 ADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKI 168
Query: 111 ADFGLSCTLYPGNYAEKVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
DFGL+ + + + Y APE+ L + Y++ VD+WSVG I+ ELL G F
Sbjct: 169 LDFGLA--RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 226
Query: 170 GRNNV 174
G +++
Sbjct: 227 GTDHI 231
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 84.3 bits (207), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 19/185 (10%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAE------NCIFLVVEFCAG 50
+KKL++ +S + EL L + H N+I L D F N ++LV G
Sbjct: 75 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-G 133
Query: 51 GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
+L++ ++ ++ + + + Q+ GL+ ++S IIHRDLKP N+ +++D LKI
Sbjct: 134 ADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKI 189
Query: 111 ADFGLSCTLYPGNYAEKVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
DFGL+ + + + Y APE+ L + Y++ VD+WSVG I+ ELL G F
Sbjct: 190 LDFGLA--RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 247
Query: 170 GRNNV 174
G +++
Sbjct: 248 GTDHI 252
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 84.3 bits (207), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 93/181 (51%), Gaps = 24/181 (13%)
Query: 11 SCLDCELNFLSSV-NHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH--------- 60
S L E+ + + H NII L A + ++++VE+ + GNL Y+R
Sbjct: 74 SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY 133
Query: 61 --GRVPEQ--TARKFLQ---QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADF 113
RVPE+ T + + QL G+E L S IHRDL N+L++ ++ ++KIADF
Sbjct: 134 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADF 190
Query: 114 GLSCTLYPGNYAEKVCGSPL---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFS 169
GL+ + +Y +K L +MAPE L + Y + D+WS G +++E+ G P+
Sbjct: 191 GLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP 250
Query: 170 G 170
G
Sbjct: 251 G 251
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 84.3 bits (207), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 19/185 (10%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAE------NCIFLVVEFCAG 50
+KKL++ +S + EL L + H N+I L D F N ++LV G
Sbjct: 52 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-G 110
Query: 51 GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
+L++ ++ ++ + + + Q+ GL+ ++S IIHRDLKP N+ +++D LKI
Sbjct: 111 ADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKI 166
Query: 111 ADFGLSCTLYPGNYAEKVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
DFGL+ + + + Y APE+ L + Y++ VD+WSVG I+ ELL G F
Sbjct: 167 LDFGLA--RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
Query: 170 GRNNV 174
G +++
Sbjct: 225 GTDHI 229
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 84.3 bits (207), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 86/159 (54%), Gaps = 8/159 (5%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHG---RVPEQTARKFL 72
E+ + H NI++ +F I + +E GG+LS+ +R + EQT +
Sbjct: 69 EIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYT 128
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY-AEKVCGS 131
+Q+ GL+ L+ + I+HRD+K +N+L++ +LKI+DFG S L N E G+
Sbjct: 129 KQILEGLKYLHDNQIVHRDIKGDNVLINTYSG--VLKISDFGTSKRLAGINPCTETFTGT 186
Query: 132 PLYMAPEVLQF--QRYDEKVDMWSVGAILFELLNGYPPF 168
YMAPE++ + Y + D+WS+G + E+ G PPF
Sbjct: 187 LQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 225
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 84.3 bits (207), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 19/185 (10%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAE------NCIFLVVEFCAG 50
+KKL++ +S + EL L + H N+I L D F N ++LV G
Sbjct: 63 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-G 121
Query: 51 GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
+L++ ++ ++ + + + Q+ GL+ ++S IIHRDLKP N+ +++D LKI
Sbjct: 122 ADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKI 177
Query: 111 ADFGLSCTLYPGNYAEKVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
DFGL+ + + + Y APE+ L + Y++ VD+WSVG I+ ELL G F
Sbjct: 178 LDFGLA--RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 235
Query: 170 GRNNV 174
G +++
Sbjct: 236 GTDHI 240
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 84.3 bits (207), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 19/185 (10%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAE------NCIFLVVEFCAG 50
+KKL++ +S + EL L + H N+I L D F N ++LV G
Sbjct: 50 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-G 108
Query: 51 GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
+L++ ++ ++ + + + Q+ GL+ ++S IIHRDLKP N+ +++D LKI
Sbjct: 109 ADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKI 164
Query: 111 ADFGLSCTLYPGNYAEKVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
DFGL+ + + + Y APE+ L + Y++ VD+WSVG I+ ELL G F
Sbjct: 165 LDFGLA--RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 222
Query: 170 GRNNV 174
G +++
Sbjct: 223 GTDHI 227
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 84.3 bits (207), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 19/185 (10%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAE------NCIFLVVEFCAG 50
+KKL++ +S + EL L + H N+I L D F N ++LV G
Sbjct: 54 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-G 112
Query: 51 GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
+L++ ++ ++ + + + Q+ GL+ ++S IIHRDLKP N+ +++D LKI
Sbjct: 113 ADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKI 168
Query: 111 ADFGLSCTLYPGNYAEKVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
DFGL+ + + + Y APE+ L + Y++ VD+WSVG I+ ELL G F
Sbjct: 169 LDFGLA--RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 226
Query: 170 GRNNV 174
G +++
Sbjct: 227 GTDHI 231
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 84.3 bits (207), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 19/185 (10%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAE------NCIFLVVEFCAG 50
+KKL++ +S + EL L + H N+I L D F N ++LV G
Sbjct: 57 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-G 115
Query: 51 GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
+L++ ++ ++ + + + Q+ GL+ ++S IIHRDLKP N+ +++D LKI
Sbjct: 116 ADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKI 171
Query: 111 ADFGLSCTLYPGNYAEKVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
DFGL+ + + + Y APE+ L + Y++ VD+WSVG I+ ELL G F
Sbjct: 172 LDFGLA--RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 229
Query: 170 GRNNV 174
G +++
Sbjct: 230 GTDHI 234
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 84.3 bits (207), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 19/185 (10%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAE------NCIFLVVEFCAG 50
+KKL++ +S + EL L + H N+I L D F N ++LV G
Sbjct: 54 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-G 112
Query: 51 GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
+L++ ++ ++ + + + Q+ GL+ ++S IIHRDLKP N+ +++D LKI
Sbjct: 113 ADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKI 168
Query: 111 ADFGLSCTLYPGNYAEKVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
DFGL+ + + + Y APE+ L + Y++ VD+WSVG I+ ELL G F
Sbjct: 169 LDFGLA--RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 226
Query: 170 GRNNV 174
G +++
Sbjct: 227 GTDHI 231
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 84.3 bits (207), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 19/185 (10%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAE------NCIFLVVEFCAG 50
+KKL++ +S + EL L + H N+I L D F N ++LV G
Sbjct: 51 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-G 109
Query: 51 GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
+L++ ++ ++ + + + Q+ GL+ ++S IIHRDLKP N+ +++D LKI
Sbjct: 110 ADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKI 165
Query: 111 ADFGLSCTLYPGNYAEKVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
DFGL+ + + + Y APE+ L + Y++ VD+WSVG I+ ELL G F
Sbjct: 166 LDFGLA--RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 223
Query: 170 GRNNV 174
G +++
Sbjct: 224 GTDHI 228
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 19/185 (10%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAE------NCIFLVVEFCAG 50
+KKL++ +S + EL L + H N+I L D F N ++LV G
Sbjct: 52 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-G 110
Query: 51 GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
+L++ ++ ++ + + + Q+ GL+ ++S IIHRDLKP N+ +++D LKI
Sbjct: 111 ADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKI 166
Query: 111 ADFGLSCTLYPGNYAEKVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
DFGL+ + + + Y APE+ L + Y++ VD+WSVG I+ ELL G F
Sbjct: 167 LDFGLA--RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
Query: 170 GRNNV 174
G +++
Sbjct: 225 GTDHI 229
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 19/185 (10%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAE------NCIFLVVEFCAG 50
+KKL++ +S + EL L + H N+I L D F N ++LV G
Sbjct: 72 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-G 130
Query: 51 GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
+L++ ++ ++ + + + Q+ GL+ ++S IIHRDLKP N+ +++D LKI
Sbjct: 131 ADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKI 186
Query: 111 ADFGLSCTLYPGNYAEKVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
DFGL+ + + + Y APE+ L + Y++ VD+WSVG I+ ELL G F
Sbjct: 187 LDFGLA--RHTDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 244
Query: 170 GRNNV 174
G +++
Sbjct: 245 GTDHI 249
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 19/185 (10%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAE------NCIFLVVEFCAG 50
+KKL++ +S + EL L + H N+I L D F N ++LV G
Sbjct: 64 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-G 122
Query: 51 GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
+L++ ++ ++ + + + Q+ GL+ ++S IIHRDLKP N+ +++D LKI
Sbjct: 123 ADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKI 178
Query: 111 ADFGLSCTLYPGNYAEKVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
DFGL+ + + + Y APE+ L + Y++ VD+WSVG I+ ELL G F
Sbjct: 179 LDFGLA--RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 236
Query: 170 GRNNV 174
G +++
Sbjct: 237 GTDHI 241
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 19/185 (10%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAE------NCIFLVVEFCAG 50
+KKL++ +S + EL L + H N+I L D F N ++LV G
Sbjct: 52 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-G 110
Query: 51 GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
+L++ ++ ++ + + + Q+ GL+ ++S IIHRDLKP N+ +++D LKI
Sbjct: 111 ADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKI 166
Query: 111 ADFGLSCTLYPGNYAEKVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
DFGL+ + + + Y APE+ L + Y++ VD+WSVG I+ ELL G F
Sbjct: 167 LDFGLA--RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
Query: 170 GRNNV 174
G +++
Sbjct: 225 GTDHI 229
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 19/185 (10%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAE------NCIFLVVEFCAG 50
+KKL++ +S + EL L + H N+I L D F N ++LV G
Sbjct: 64 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-G 122
Query: 51 GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
+L++ ++ ++ + + + Q+ GL+ ++S IIHRDLKP N+ +++D LKI
Sbjct: 123 ADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKI 178
Query: 111 ADFGLSCTLYPGNYAEKVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
DFGL+ + + + Y APE+ L + Y++ VD+WSVG I+ ELL G F
Sbjct: 179 LDFGLA--RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 236
Query: 170 GRNNV 174
G +++
Sbjct: 237 GTDHI 241
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 83/165 (50%), Gaps = 12/165 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENC------IFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
EL + VNH NII L + F + ++LV+E NL I++ + +
Sbjct: 73 ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQME--LDHERMS 129
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVC 129
L Q+ G++ L+S IIHRDLKP NI++ D LKI DFGL+ T
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFMMTPYV 186
Query: 130 GSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
+ Y APEV+ Y E VD+WSVG I+ E++ F GR+ +
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI 231
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 19/185 (10%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAE------NCIFLVVEFCAG 50
+KKL++ +S + EL L + H N+I L D F N ++LV G
Sbjct: 62 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-G 120
Query: 51 GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
+L++ ++ ++ + + + Q+ GL+ ++S IIHRDLKP N+ +++D LKI
Sbjct: 121 ADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKI 176
Query: 111 ADFGLSCTLYPGNYAEKVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
DFGL+ + + + Y APE+ L + Y++ VD+WSVG I+ ELL G F
Sbjct: 177 LDFGLA--RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 234
Query: 170 GRNNV 174
G +++
Sbjct: 235 GTDHI 239
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 19/185 (10%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAE------NCIFLVVEFCAG 50
+KKL++ +S + EL L + H N+I L D F N ++LV G
Sbjct: 52 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-G 110
Query: 51 GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
+L++ ++ ++ + + + Q+ GL+ ++S IIHRDLKP N+ +++D LKI
Sbjct: 111 ADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKI 166
Query: 111 ADFGLSCTLYPGNYAEKVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
DFGL+ + + + Y APE+ L + Y++ VD+WSVG I+ ELL G F
Sbjct: 167 LDFGLA--RHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
Query: 170 GRNNV 174
G +++
Sbjct: 225 GTDHI 229
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 19/185 (10%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAE------NCIFLVVEFCAG 50
+KKL++ +S + EL L + H N+I L D F N ++LV G
Sbjct: 72 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-G 130
Query: 51 GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
+L++ ++ ++ + + + Q+ GL+ ++S IIHRDLKP N+ +++D LKI
Sbjct: 131 ADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKI 186
Query: 111 ADFGLSCTLYPGNYAEKVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
DFGL+ + + + Y APE+ L + Y++ VD+WSVG I+ ELL G F
Sbjct: 187 LDFGLA--RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 244
Query: 170 GRNNV 174
G +++
Sbjct: 245 GTDHI 249
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 19/185 (10%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAE------NCIFLVVEFCAG 50
+KKL++ +S + EL L + H N+I L D F N ++LV G
Sbjct: 52 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-G 110
Query: 51 GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
+L++ ++ ++ + + + Q+ GL+ ++S IIHRDLKP N+ +++D LKI
Sbjct: 111 ADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKI 166
Query: 111 ADFGLSCTLYPGNYAEKVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
DFGL+ + + + Y APE+ L + Y++ VD+WSVG I+ ELL G F
Sbjct: 167 LDFGLA--RHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
Query: 170 GRNNV 174
G +++
Sbjct: 225 GTDHI 229
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 19/185 (10%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAE------NCIFLVVEFCAG 50
+KKL++ +S + EL L + H N+I L D F N ++LV G
Sbjct: 72 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-G 130
Query: 51 GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
+L++ ++ ++ + + + Q+ GL+ ++S IIHRDLKP N+ +++D LKI
Sbjct: 131 ADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKI 186
Query: 111 ADFGLSCTLYPGNYAEKVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
DFGL+ + + + Y APE+ L + Y++ VD+WSVG I+ ELL G F
Sbjct: 187 LDFGLA--RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 244
Query: 170 GRNNV 174
G +++
Sbjct: 245 GTDHI 249
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 19/185 (10%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAE------NCIFLVVEFCAG 50
+KKL++ +S + EL L + H N+I L D F N ++LV G
Sbjct: 71 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-G 129
Query: 51 GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
+L++ ++ ++ + + + Q+ GL+ ++S IIHRDLKP N+ +++D LKI
Sbjct: 130 ADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKI 185
Query: 111 ADFGLSCTLYPGNYAEKVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
DFGL+ + + + Y APE+ L + Y++ VD+WSVG I+ ELL G F
Sbjct: 186 LDFGLA--RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 243
Query: 170 GRNNV 174
G +++
Sbjct: 244 GTDHI 248
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 19/185 (10%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAE------NCIFLVVEFCAG 50
+KKL++ +S + EL L + H N+I L D F N ++LV G
Sbjct: 71 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-G 129
Query: 51 GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
+L++ ++ ++ + + + Q+ GL+ ++S IIHRDLKP N+ +++D LKI
Sbjct: 130 ADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKI 185
Query: 111 ADFGLSCTLYPGNYAEKVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
DFGL+ + + + Y APE+ L + Y++ VD+WSVG I+ ELL G F
Sbjct: 186 LDFGLA--RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 243
Query: 170 GRNNV 174
G +++
Sbjct: 244 GTDHI 248
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 86/159 (54%), Gaps = 8/159 (5%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHG---RVPEQTARKFL 72
E+ + H NI++ +F I + +E GG+LS+ +R + EQT +
Sbjct: 55 EIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYT 114
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY-AEKVCGS 131
+Q+ GL+ L+ + I+HRD+K +N+L++ +LKI+DFG S L N E G+
Sbjct: 115 KQILEGLKYLHDNQIVHRDIKGDNVLINTYSG--VLKISDFGTSKRLAGINPCTETFTGT 172
Query: 132 PLYMAPEVLQF--QRYDEKVDMWSVGAILFELLNGYPPF 168
YMAPE++ + Y + D+WS+G + E+ G PPF
Sbjct: 173 LQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 211
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 19/185 (10%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAE------NCIFLVVEFCAG 50
+KKL++ +S + EL L + H N+I L D F N ++LV G
Sbjct: 75 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-G 133
Query: 51 GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
+L++ ++ ++ + + + Q+ GL+ ++S IIHRDLKP N+ +++D LKI
Sbjct: 134 ADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKI 189
Query: 111 ADFGLSCTLYPGNYAEKVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
DFGL+ + + + Y APE+ L + Y++ VD+WSVG I+ ELL G F
Sbjct: 190 LDFGLA--RHTDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 247
Query: 170 GRNNV 174
G +++
Sbjct: 248 GTDHI 252
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 83/165 (50%), Gaps = 12/165 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENC------IFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
EL + VNH NII L + F + ++LV+E NL I++ + +
Sbjct: 73 ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQME--LDHERMS 129
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVC 129
L Q+ G++ L+S IIHRDLKP NI++ D LKI DFGL+ T
Sbjct: 130 YLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFMMTPYV 186
Query: 130 GSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
+ Y APEV+ Y E VD+WSVG I+ E++ F GR+ +
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI 231
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 84.0 bits (206), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 104/218 (47%), Gaps = 24/218 (11%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQA--ENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQ 73
E+ L ++HPN+++L + E+ +++V E G + L + E AR + Q
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK-PLSEDQARFYFQ 144
Query: 74 QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYA--EKVCGS 131
L G+E L+ IIHRD+KP N+L+ +D +KIADFG+S + G+ A G+
Sbjct: 145 DLIKGIEYLHYQKIIHRDIKPSNLLVG---EDGHIKIADFGVSNE-FKGSDALLSNTVGT 200
Query: 132 PLYMAPEVLQFQR---YDEKVDMWSVGAILFELLNGYPPFSGRNNVQL------------ 176
P +MAPE L R + +D+W++G L+ + G PF + L
Sbjct: 201 PAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFP 260
Query: 177 IVPALHPDCVDMCLKLLSANTVDRLSFNEFYHHRFLRR 214
P + D D+ ++L N R+ E H ++ R
Sbjct: 261 DQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVTR 298
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 84.0 bits (206), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 98/185 (52%), Gaps = 19/185 (10%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAE------NCIFLVVEFCAG 50
+KKL++ +S + EL L + H N+I L D F N ++LV G
Sbjct: 52 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-G 110
Query: 51 GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
+L++ ++ ++ + + + Q+ GL+ ++S IIHRDLKP N+ +++D LKI
Sbjct: 111 ADLNNIVKSQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDSELKI 166
Query: 111 ADFGLSCTLYPGNYAEKVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
DFGL C + + + Y APE+ L + Y++ VD+WSVG I+ ELL G F
Sbjct: 167 LDFGL-CR-HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
Query: 170 GRNNV 174
G +++
Sbjct: 225 GTDHI 229
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 84.0 bits (206), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 82/165 (49%), Gaps = 12/165 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENC------IFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
EL L VNH NII L + F + ++LV+E NL I H + +
Sbjct: 73 ELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL-MDANLCQVI--HMELDHERMS 129
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVC 129
L Q+ G++ L+S IIHRDLKP NI++ D LKI DFGL+ T
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTACTNFMMTPYV 186
Query: 130 GSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
+ Y APEV+ Y VD+WSVG I+ EL+ G F G +++
Sbjct: 187 VTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHI 231
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 84.0 bits (206), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 89/168 (52%), Gaps = 9/168 (5%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTA-RKFLQQ 74
E + ++HP +++ + E I++V E+ + G L +Y+R HG+ E + +
Sbjct: 53 EAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYD 112
Query: 75 LGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPL- 133
+ G+ L SH IHRDL N L +D D+ +K++DFG++ + Y V G+
Sbjct: 113 VCEGMAFLESHQFIHRDLAARNCL---VDRDLCVKVSDFGMTRYVLDDQYVSSV-GTKFP 168
Query: 134 --YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIV 178
+ APEV + +Y K D+W+ G +++E+ + G P+ N ++++
Sbjct: 169 VKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVL 216
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 93/181 (51%), Gaps = 24/181 (13%)
Query: 11 SCLDCELNFLSSV-NHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH--------- 60
S L E+ + + H NII L A + ++++VE+ + GNL Y+R
Sbjct: 85 SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY 144
Query: 61 --GRVPEQ--TARKFLQ---QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADF 113
RVPE+ T + + QL G+E L S IHRDL N+L++ ++ +++IADF
Sbjct: 145 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMRIADF 201
Query: 114 GLSCTLYPGNYAEKVCGSPL---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFS 169
GL+ + +Y +K L +MAPE L + Y + D+WS G +++E+ G P+
Sbjct: 202 GLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP 261
Query: 170 G 170
G
Sbjct: 262 G 262
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 83/165 (50%), Gaps = 12/165 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENC------IFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
EL + VNH NII L + F + ++LV+E NL I++ + +
Sbjct: 73 ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME--LDHERMS 129
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVC 129
L Q+ G++ L+S IIHRDLKP NI++ D LKI DFGL+ T
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFMMTPYV 186
Query: 130 GSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
+ Y APEV+ Y E VD+WSVG I+ E++ F GR+ +
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI 231
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 83/165 (50%), Gaps = 12/165 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENC------IFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
EL + VNH NII L + F + ++LV+E NL I++ + +
Sbjct: 66 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQME--LDHERMS 122
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVC 129
L Q+ G++ L+S IIHRDLKP NI++ D LKI DFGL+ T
Sbjct: 123 YLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFMMTPYV 179
Query: 130 GSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
+ Y APEV+ Y E VD+WSVG I+ E++ F GR+ +
Sbjct: 180 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI 224
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 83.6 bits (205), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 99/194 (51%), Gaps = 22/194 (11%)
Query: 2 LKKLNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHG 61
LK + + + E L+++ H +I++ + + + +V E+ G+L+ ++R HG
Sbjct: 51 LKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHG 110
Query: 62 -------------RVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVML 108
+ + QQ+ AG+ L S H +HRDL N L+ +++++
Sbjct: 111 PDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVG---ENLLV 167
Query: 109 KIADFGLSCTLYPGNYAEKVCGSPL----YMAPEVLQFQRYDEKVDMWSVGAILFELLN- 163
KI DFG+S +Y +Y +V G + +M PE + ++++ + D+WS+G +L+E+
Sbjct: 168 KIGDFGMSRDVYSTDYY-RVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTY 226
Query: 164 GYPPFSGRNNVQLI 177
G P+ +N ++I
Sbjct: 227 GKQPWYQLSNNEVI 240
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 83.6 bits (205), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 83/165 (50%), Gaps = 12/165 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENC------IFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
EL + VNH NII L + F + ++LV+E NL I++ + +
Sbjct: 73 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQME--LDHERMS 129
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVC 129
L Q+ G++ L+S IIHRDLKP NI++ D LKI DFGL+ T
Sbjct: 130 YLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFMMTPYV 186
Query: 130 GSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
+ Y APEV+ Y E VD+WSVG I+ E++ F GR+ +
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI 231
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 83.6 bits (205), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 86/163 (52%), Gaps = 8/163 (4%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHG--RVPEQTARKFLQ 73
E++ L +NHPNI++L D EN ++LV E +L ++ +P + +L
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEHV-DQDLKKFMDASALTGIPLPLIKSYLF 113
Query: 74 QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL-YPGNYAEKVCGSP 132
QL GL +SH ++HRDLKP+N+L ++ + +K+ADFGL+ P +
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKPQNLL---INTEGAIKLADFGLARAFGVPVRTYXHEVVTL 170
Query: 133 LYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
Y APE+ L + Y VD+WS+G I E++ F G + +
Sbjct: 171 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 213
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 83.6 bits (205), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 85/169 (50%), Gaps = 9/169 (5%)
Query: 15 CELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH-GRVPEQTARKFLQ 73
E + + +HPNIIRL +V E+ G+L +++R H G+ L+
Sbjct: 99 SEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLR 158
Query: 74 QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPG-NYAEKVCGSP 132
+GAG+ L+ +HRDL N+L +D +++ K++DFGLS L + A G
Sbjct: 159 GVGAGMRYLSDLGYVHRDLAARNVL---VDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGK 215
Query: 133 L---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
+ + APE + F+ + D+WS G +++E+L G P+ N +I
Sbjct: 216 IPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVI 264
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 83.6 bits (205), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 98/185 (52%), Gaps = 19/185 (10%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAE------NCIFLVVEFCAG 50
+KKL++ +S + EL L + H N+I L D F N ++LV G
Sbjct: 52 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-G 110
Query: 51 GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
+L++ ++ ++ + + + Q+ GL+ ++S IIHRDLKP N+ +++D LKI
Sbjct: 111 ADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKI 166
Query: 111 ADFGLSCTLYPGNYAEKVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
D+GL+ + + + Y APE+ L + Y++ VD+WSVG I+ ELL G F
Sbjct: 167 LDYGLA--RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
Query: 170 GRNNV 174
G +++
Sbjct: 225 GTDHI 229
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 83.6 bits (205), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 82/163 (50%), Gaps = 10/163 (6%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E + + HPNII L E + LV+EF GG L+ + R+P + Q+
Sbjct: 56 EAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLS-GKRIPPDILVNWAVQI 114
Query: 76 GAGLEILNSHHI---IHRDLKPENILL-----SGLDDDVMLKIADFGLSCTLYPGNYAEK 127
G+ L+ I IHRDLK NIL+ +G + +LKI DFGL+ +
Sbjct: 115 ARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWH-RTTKMS 173
Query: 128 VCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSG 170
G+ +MAPEV++ + + D+WS G +L+ELL G PF G
Sbjct: 174 AAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRG 216
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 96/174 (55%), Gaps = 19/174 (10%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKF---- 71
E+ L H NI+ LF + ++ + +V ++C G +L Y LH V E + F
Sbjct: 82 EVAVLRKTRHVNIL-LFMGYMTKDNLAIVTQWCEGSSL--YKHLH--VQETKFQMFQLID 136
Query: 72 -LQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSC--TLYPGN-YAEK 127
+Q G++ L++ +IIHRD+K NI L + + +KI DFGL+ + + G+ E+
Sbjct: 137 IARQTAQGMDYLHAKNIIHRDMKSNNIF---LHEGLTVKIGDFGLATVKSRWSGSQQVEQ 193
Query: 128 VCGSPLYMAPEVLQFQR---YDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV 178
GS L+MAPEV++ Q + + D++S G +L+EL+ G P+S NN I+
Sbjct: 194 PTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQII 247
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 92/184 (50%), Gaps = 19/184 (10%)
Query: 9 LKSCLDC-----------ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYI 57
+K+C +C E + +HP+I++L EN +++++E C G L S++
Sbjct: 43 IKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFL 101
Query: 58 RLHG-RVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLS 116
++ + + + QL L L S +HRD+ N+L+S D +K+ DFGLS
Sbjct: 102 QVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATD---CVKLGDFGLS 158
Query: 117 CTLYPGNYAEKVCGS-PL-YMAPEVLQFQRYDEKVDMWSVGAILFE-LLNGYPPFSGRNN 173
+ Y + G P+ +MAPE + F+R+ D+W G ++E L++G PF G N
Sbjct: 159 RYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 218
Query: 174 VQLI 177
+I
Sbjct: 219 NDVI 222
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 84/165 (50%), Gaps = 12/165 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENC------IFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
EL + VNH NII L + F + +++V+E NL I++ + +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQME--LDHERMS 129
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVC 129
L Q+ G++ L+S IIHRDLKP NI++ D LKI DFGL+ T
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYV 186
Query: 130 GSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
+ Y APEV+ Y E VD+WSVG I+ E++ G F G +++
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI 231
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 92/184 (50%), Gaps = 19/184 (10%)
Query: 9 LKSCLDC-----------ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYI 57
+K+C +C E + +HP+I++L EN +++++E C G L S++
Sbjct: 423 IKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFL 481
Query: 58 RLHG-RVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLS 116
++ + + + QL L L S +HRD+ N+L+S D +K+ DFGLS
Sbjct: 482 QVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATD---CVKLGDFGLS 538
Query: 117 CTLYPGNYAEKVCGS-PL-YMAPEVLQFQRYDEKVDMWSVGAILFE-LLNGYPPFSGRNN 173
+ Y + G P+ +MAPE + F+R+ D+W G ++E L++G PF G N
Sbjct: 539 RYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 598
Query: 174 VQLI 177
+I
Sbjct: 599 NDVI 602
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 97/185 (52%), Gaps = 19/185 (10%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAE------NCIFLVVEFCAG 50
+KKL++ +S + EL L + H N+I L D F N ++LV G
Sbjct: 52 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-G 110
Query: 51 GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
+L++ ++ ++ + + + Q+ GL+ ++S IIHRDLKP N+ +++D LKI
Sbjct: 111 ADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKI 166
Query: 111 ADFGLSCTLYPGNYAEKVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
DFGL+ + + + Y APE+ L Y++ VD+WSVG I+ ELL G F
Sbjct: 167 LDFGLA--RHTDDEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFP 224
Query: 170 GRNNV 174
G +++
Sbjct: 225 GTDHI 229
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 84/165 (50%), Gaps = 12/165 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENC------IFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
EL + VNH NII L + F + +++V+E NL I++ + +
Sbjct: 74 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQME--LDHERMS 130
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVC 129
L Q+ G++ L+S IIHRDLKP NI++ D LKI DFGL+ T
Sbjct: 131 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYV 187
Query: 130 GSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
+ Y APEV+ Y E VD+WSVG I+ E++ G F G +++
Sbjct: 188 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI 232
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 92/183 (50%), Gaps = 28/183 (15%)
Query: 11 SCLDCELNFLSSV-NHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVP----- 64
S L E+ + + H NII L A + ++++VE+ + GNL Y L R P
Sbjct: 71 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY--LQARRPPGLEY 128
Query: 65 ---------EQTARKFL----QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIA 111
EQ + K L Q+ G+E L S IHRDL N+L++ +D ++KIA
Sbjct: 129 SYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIA 185
Query: 112 DFGLSCTLYPGNYAEKVCGSPL---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPP 167
DFGL+ ++ +Y +K L +MAPE L + Y + D+WS G +L+E+ G P
Sbjct: 186 DFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 245
Query: 168 FSG 170
+ G
Sbjct: 246 YPG 248
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 85/169 (50%), Gaps = 9/169 (5%)
Query: 15 CELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH-GRVPEQTARKFLQ 73
E + + +HPNIIRL +V E+ G+L +++R H G+ L+
Sbjct: 99 SEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLR 158
Query: 74 QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPG-NYAEKVCGSP 132
+GAG+ L+ +HRDL N+L +D +++ K++DFGLS L + A G
Sbjct: 159 GVGAGMRYLSDLGYVHRDLAARNVL---VDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGK 215
Query: 133 L---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
+ + APE + F+ + D+WS G +++E+L G P+ N +I
Sbjct: 216 IPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVI 264
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 83/165 (50%), Gaps = 12/165 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENC------IFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
EL + VNH NII L + F + ++LV+E NL I++ + +
Sbjct: 74 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME--LDHERMS 130
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVC 129
L Q+ G++ L+S IIHRDLKP NI++ D LKI DFGL+ T
Sbjct: 131 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYV 187
Query: 130 GSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
+ Y APEV+ Y E VD+WSVG I+ E++ F GR+ +
Sbjct: 188 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI 232
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 83/165 (50%), Gaps = 12/165 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENC------IFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
EL + VNH NII L + F + ++LV+E NL I++ + +
Sbjct: 66 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME--LDHERMS 122
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVC 129
L Q+ G++ L+S IIHRDLKP NI++ D LKI DFGL+ T
Sbjct: 123 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYV 179
Query: 130 GSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
+ Y APEV+ Y E VD+WSVG I+ E++ F GR+ +
Sbjct: 180 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI 224
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 92/183 (50%), Gaps = 28/183 (15%)
Query: 11 SCLDCELNFLSSV-NHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVP----- 64
S L E+ + + H NII L A + ++++VE+ + GNL Y L R P
Sbjct: 67 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY--LQARRPPGLEY 124
Query: 65 ---------EQTARKFL----QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIA 111
EQ + K L Q+ G+E L S IHRDL N+L++ +D ++KIA
Sbjct: 125 SYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIA 181
Query: 112 DFGLSCTLYPGNYAEKVCGSPL---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPP 167
DFGL+ ++ +Y +K L +MAPE L + Y + D+WS G +L+E+ G P
Sbjct: 182 DFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 241
Query: 168 FSG 170
+ G
Sbjct: 242 YPG 244
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 92/183 (50%), Gaps = 28/183 (15%)
Query: 11 SCLDCELNFLSSV-NHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVP----- 64
S L E+ + + H NII L A + ++++VE+ + GNL Y L R P
Sbjct: 78 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY--LQARRPPGLEY 135
Query: 65 ---------EQTARKFL----QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIA 111
EQ + K L Q+ G+E L S IHRDL N+L++ +D ++KIA
Sbjct: 136 SYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIA 192
Query: 112 DFGLSCTLYPGNYAEKVCGSPL---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPP 167
DFGL+ ++ +Y +K L +MAPE L + Y + D+WS G +L+E+ G P
Sbjct: 193 DFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 252
Query: 168 FSG 170
+ G
Sbjct: 253 YPG 255
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 83/165 (50%), Gaps = 12/165 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENC------IFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
EL + VNH NII L + F + ++LV+E NL I++ + +
Sbjct: 67 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME--LDHERMS 123
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVC 129
L Q+ G++ L+S IIHRDLKP NI++ D LKI DFGL+ T
Sbjct: 124 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYV 180
Query: 130 GSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
+ Y APEV+ Y E VD+WSVG I+ E++ F GR+ +
Sbjct: 181 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI 225
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 84/165 (50%), Gaps = 12/165 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENC------IFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
EL + VNH NII L + F + +++V+E NL I++ + +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQME--LDHERMS 129
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVC 129
L Q+ G++ L+S IIHRDLKP NI++ D LKI DFGL+ T
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYV 186
Query: 130 GSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
+ Y APEV+ Y E VD+WSVG I+ E++ G F G +++
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI 231
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 83/165 (50%), Gaps = 12/165 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENC------IFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
EL + VNH NII L + F + ++LV+E NL I++ + +
Sbjct: 73 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME--LDHERMS 129
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVC 129
L Q+ G++ L+S IIHRDLKP NI++ D LKI DFGL+ T
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYV 186
Query: 130 GSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
+ Y APEV+ Y E VD+WSVG I+ E++ F GR+ +
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI 231
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 83/165 (50%), Gaps = 12/165 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENC------IFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
EL + VNH NII L + F + ++LV+E NL I++ + +
Sbjct: 67 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME--LDHERMS 123
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVC 129
L Q+ G++ L+S IIHRDLKP NI++ D LKI DFGL+ T
Sbjct: 124 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYV 180
Query: 130 GSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
+ Y APEV+ Y E VD+WSVG I+ E++ F GR+ +
Sbjct: 181 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI 225
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 83/165 (50%), Gaps = 12/165 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENC------IFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
EL + VNH NII L + F + ++LV+E NL I++ + +
Sbjct: 73 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME--LDHERMS 129
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVC 129
L Q+ G++ L+S IIHRDLKP NI++ D LKI DFGL+ T
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYV 186
Query: 130 GSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
+ Y APEV+ Y E VD+WSVG I+ E++ F GR+ +
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI 231
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 92/183 (50%), Gaps = 28/183 (15%)
Query: 11 SCLDCELNFLSSV-NHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVP----- 64
S L E+ + + H NII L A + ++++VE+ + GNL Y L R P
Sbjct: 78 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY--LQAREPPGLEY 135
Query: 65 ---------EQTARKFL----QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIA 111
EQ + K L Q+ G+E L S IHRDL N+L++ +D ++KIA
Sbjct: 136 SYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIA 192
Query: 112 DFGLSCTLYPGNYAEKVCGSPL---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPP 167
DFGL+ ++ +Y +K L +MAPE L + Y + D+WS G +L+E+ G P
Sbjct: 193 DFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 252
Query: 168 FSG 170
+ G
Sbjct: 253 YPG 255
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 83/165 (50%), Gaps = 12/165 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENC------IFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
EL + VNH NII L + F + ++LV+E NL I++ + +
Sbjct: 111 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL-MDANLCQVIQME--LDHERMS 167
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVC 129
L Q+ G++ L+S IIHRDLKP NI++ D LKI DFGL+ T
Sbjct: 168 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYV 224
Query: 130 GSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
+ Y APEV+ Y E VD+WSVG I+ E++ F GR+ +
Sbjct: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI 269
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 95/188 (50%), Gaps = 13/188 (6%)
Query: 5 LNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHG-RV 63
L + SC E + L + + I +L AFQ EN ++LV+E+ GG+L + + G R+
Sbjct: 100 LKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERI 159
Query: 64 PEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN 123
P + AR +L ++ ++ ++ +HRD+KP+NIL LD +++ADFG L
Sbjct: 160 PAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNIL---LDRCGHIRLADFGSCLKLRADG 216
Query: 124 YAEKV--CGSPLYMAPEVLQ-------FQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
+ G+P Y++PE+LQ Y + D W++G +E+ G PF +
Sbjct: 217 TVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTA 276
Query: 175 QLIVPALH 182
+ +H
Sbjct: 277 ETYGKIVH 284
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 83/165 (50%), Gaps = 12/165 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENC------IFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
EL + VNH NII L + F + ++LV+E NL I++ + +
Sbjct: 72 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME--LDHERMS 128
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVC 129
L Q+ G++ L+S IIHRDLKP NI++ D LKI DFGL+ T
Sbjct: 129 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYV 185
Query: 130 GSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
+ Y APEV+ Y E VD+WSVG I+ E++ F GR+ +
Sbjct: 186 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI 230
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 83/165 (50%), Gaps = 12/165 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENC------IFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
EL + VNH NII L + F + ++LV+E NL I++ + +
Sbjct: 74 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME--LDHERMS 130
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVC 129
L Q+ G++ L+S IIHRDLKP NI++ D LKI DFGL+ T
Sbjct: 131 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYV 187
Query: 130 GSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
+ Y APEV+ Y E VD+WSVG I+ E++ F GR+ +
Sbjct: 188 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI 232
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 84/165 (50%), Gaps = 12/165 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENC------IFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
EL + VNH NII L + F + +++V+E NL I++ + +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQME--LDHERMS 129
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVC 129
L Q+ G++ L+S IIHRDLKP NI++ D LKI DFGL+ T
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPEV 186
Query: 130 GSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
+ Y APEV+ Y E VD+WSVG I+ E++ G F G +++
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI 231
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 97/187 (51%), Gaps = 23/187 (12%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAENCI-----FLVVEFCAGG 51
+KKL++ +S + EL L + H N+I L D F I +V G
Sbjct: 58 VKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGA 117
Query: 52 NLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIA 111
+L++ ++ + ++ + + QL GL+ ++S IIHRDLKP N+ +++D L+I
Sbjct: 118 DLNNIVKSQA-LSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNV---AVNEDSELRIL 173
Query: 112 DFGLSCTLYPGNYAEKVCG---SPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPP 167
DFGL+ E++ G + Y APE+ L + Y++ VD+WSVG I+ ELL G
Sbjct: 174 DFGLAR-----QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKAL 228
Query: 168 FSGRNNV 174
F G + +
Sbjct: 229 FPGSDYI 235
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 99/239 (41%), Gaps = 45/239 (18%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E+ L + H NI+RL D ++ + LV EFC + +G + + + FL QL
Sbjct: 51 EICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQL 110
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL-YPGNYAEKVCGSPLY 134
GL +S +++HRDLKP+N+L ++ + LK+ADFGL+ P + Y
Sbjct: 111 LKGLGFCHSRNVLHRDLKPQNLL---INRNGELKLADFGLARAFGIPVRCYSAEVVTLWY 167
Query: 135 MAPEVL-QFQRYDEKVDMWSVGAILFELLNG----------------------------- 164
P+VL + Y +DMWS G I EL N
Sbjct: 168 RPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQW 227
Query: 165 -----------YPPFSGRNNVQLIVPALHPDCVDMCLKLLSANTVDRLSFNEFYHHRFL 212
YP + ++ +VP L+ D+ LL N V R+S E H +
Sbjct: 228 PSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYF 286
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 92/183 (50%), Gaps = 28/183 (15%)
Query: 11 SCLDCELNFLSSV-NHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVP----- 64
S L E+ + + H NII L A + ++++VE+ + GNL Y L R P
Sbjct: 70 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY--LQARRPPGLEY 127
Query: 65 ---------EQTARKFL----QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIA 111
EQ + K L Q+ G+E L S IHRDL N+L++ +D ++KIA
Sbjct: 128 SYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIA 184
Query: 112 DFGLSCTLYPGNYAEKVCGSPL---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPP 167
DFGL+ ++ +Y +K L +MAPE L + Y + D+WS G +L+E+ G P
Sbjct: 185 DFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 244
Query: 168 FSG 170
+ G
Sbjct: 245 YPG 247
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 92/181 (50%), Gaps = 24/181 (13%)
Query: 11 SCLDCELNFLSSV-NHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH--------- 60
S L E+ + + H NII L A + ++++VE+ + GNL Y+R
Sbjct: 85 SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY 144
Query: 61 --GRVPEQ--TARKFLQ---QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADF 113
RVPE+ T + + QL G+E L S IHRDL N+L++ ++ ++KIADF
Sbjct: 145 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADF 201
Query: 114 GLSCTLYPGNYAEKVCGSPL---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFS 169
GL+ + +Y + L +MAPE L + Y + D+WS G +++E+ G P+
Sbjct: 202 GLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP 261
Query: 170 G 170
G
Sbjct: 262 G 262
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 92/183 (50%), Gaps = 28/183 (15%)
Query: 11 SCLDCELNFLSSV-NHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVP----- 64
S L E+ + + H NII L A + ++++VE+ + GNL Y L R P
Sbjct: 78 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY--LQARRPPGLEY 135
Query: 65 ---------EQTARKFL----QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIA 111
EQ + K L Q+ G+E L S IHRDL N+L++ +D ++KIA
Sbjct: 136 CYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIA 192
Query: 112 DFGLSCTLYPGNYAEKVCGSPL---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPP 167
DFGL+ ++ +Y +K L +MAPE L + Y + D+WS G +L+E+ G P
Sbjct: 193 DFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 252
Query: 168 FSG 170
+ G
Sbjct: 253 YPG 255
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 97/187 (51%), Gaps = 23/187 (12%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAENCI-----FLVVEFCAGG 51
+KKL++ +S + EL L + H N+I L D F I +V G
Sbjct: 50 VKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGA 109
Query: 52 NLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIA 111
+L++ ++ + ++ + + QL GL+ ++S IIHRDLKP N+ +++D L+I
Sbjct: 110 DLNNIVKCQA-LSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNV---AVNEDCELRIL 165
Query: 112 DFGLSCTLYPGNYAEKVCG---SPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPP 167
DFGL+ E++ G + Y APE+ L + Y++ VD+WSVG I+ ELL G
Sbjct: 166 DFGLA-----RQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKAL 220
Query: 168 FSGRNNV 174
F G + +
Sbjct: 221 FPGSDYI 227
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 83/165 (50%), Gaps = 12/165 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENC------IFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
EL + VNH NII L + F + ++LV+E NL I++ + +
Sbjct: 111 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME--LDHERMS 167
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVC 129
L Q+ G++ L+S IIHRDLKP NI++ D LKI DFGL+ T
Sbjct: 168 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYV 224
Query: 130 GSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
+ Y APEV+ Y E VD+WSVG I+ E++ F GR+ +
Sbjct: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI 269
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 92/183 (50%), Gaps = 28/183 (15%)
Query: 11 SCLDCELNFLSSV-NHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVP----- 64
S L E+ + + H NII L A + ++++VE+ + GNL Y L R P
Sbjct: 63 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY--LQARRPPGLEY 120
Query: 65 ---------EQTARKFL----QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIA 111
EQ + K L Q+ G+E L S IHRDL N+L++ +D ++KIA
Sbjct: 121 CYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIA 177
Query: 112 DFGLSCTLYPGNYAEKVCGSPL---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPP 167
DFGL+ ++ +Y +K L +MAPE L + Y + D+WS G +L+E+ G P
Sbjct: 178 DFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 237
Query: 168 FSG 170
+ G
Sbjct: 238 YPG 240
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 97/187 (51%), Gaps = 23/187 (12%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAENCI-----FLVVEFCAGG 51
+KKL++ +S + EL L + H N+I L D F I +V G
Sbjct: 58 VKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGA 117
Query: 52 NLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIA 111
+L++ ++ + ++ + + QL GL+ ++S IIHRDLKP N+ +++D L+I
Sbjct: 118 DLNNIVKCQA-LSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNV---AVNEDSELRIL 173
Query: 112 DFGLSCTLYPGNYAEKVCG---SPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPP 167
DFGL+ E++ G + Y APE+ L + Y++ VD+WSVG I+ ELL G
Sbjct: 174 DFGLAR-----QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKAL 228
Query: 168 FSGRNNV 174
F G + +
Sbjct: 229 FPGSDYI 235
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 97/185 (52%), Gaps = 19/185 (10%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAE------NCIFLVVEFCAG 50
+KKL++ +S + EL L + H N+I L D F N ++LV G
Sbjct: 81 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLM-G 139
Query: 51 GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
+L++ ++ ++ + + + Q+ GL+ ++S IIHRDLKP N+ +++D LKI
Sbjct: 140 ADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKI 195
Query: 111 ADFGLSCTLYPGNYAEKVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
DFGL+ + + + Y APE+ L + Y+ VD+WSVG I+ ELL G F
Sbjct: 196 LDFGLA--RHTDDEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFP 253
Query: 170 GRNNV 174
G +++
Sbjct: 254 GTDHI 258
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 92/181 (50%), Gaps = 24/181 (13%)
Query: 11 SCLDCELNFLSSV-NHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH--------- 60
S L E+ + + H NII L A + ++++V + + GNL Y+R
Sbjct: 85 SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSY 144
Query: 61 --GRVPEQ--TARKFLQ---QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADF 113
RVPE+ T + + QL G+E L S IHRDL N+L++ ++ ++KIADF
Sbjct: 145 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADF 201
Query: 114 GLSCTLYPGNYAEKVCGSPL---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFS 169
GL+ + +Y +K L +MAPE L + Y + D+WS G +++E+ G P+
Sbjct: 202 GLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP 261
Query: 170 G 170
G
Sbjct: 262 G 262
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 92/183 (50%), Gaps = 28/183 (15%)
Query: 11 SCLDCELNFLSSVN-HPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVP----- 64
S L E+ + + H NII L A + ++++VE+ + GNL Y L R P
Sbjct: 119 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY--LQARRPPGLEY 176
Query: 65 ---------EQTARKFL----QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIA 111
EQ + K L Q+ G+E L S IHRDL N+L++ +D ++KIA
Sbjct: 177 SYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIA 233
Query: 112 DFGLSCTLYPGNYAEKVCGSPL---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPP 167
DFGL+ ++ +Y +K L +MAPE L + Y + D+WS G +L+E+ G P
Sbjct: 234 DFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 293
Query: 168 FSG 170
+ G
Sbjct: 294 YPG 296
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 104/245 (42%), Gaps = 48/245 (19%)
Query: 17 LNFLSSVNHPNIIRLFDA-----FQAENCIFLVVEFCAGGNLSSYIRLHGR--VPEQTAR 69
L L + HPN++RL D E + LV E +L +Y+ +P +T +
Sbjct: 57 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIK 115
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVC 129
++Q GL+ L+++ I+HRDLKPENIL++ +K+ADFGL+ + V
Sbjct: 116 DLMRQFLRGLDFLHANCIVHRDLKPENILVTS---GGTVKLADFGLARIYSYQMALDPVV 172
Query: 130 GSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNN---------------- 173
+ Y APEVL Y VDMWSVG I E+ P F G +
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE 232
Query: 174 ---------------------VQLIVPALHPDCVDMCLKLLSANTVDRLSFNEFYHHRFL 212
VQ +VP + + L++L+ N R+S H +L
Sbjct: 233 DDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
Query: 213 RRNSA 217
++
Sbjct: 293 HKDEG 297
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 84/165 (50%), Gaps = 12/165 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENC------IFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
EL + VNH NII L + F + +++V+E NL I++ + +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL-MDANLCQVIQME--LDHERMS 129
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVC 129
L Q+ G++ L+S IIHRDLKP NI++ D LKI DFGL+ T E
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMEPEV 186
Query: 130 GSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
+ Y APEV+ Y E VD+WSVG I+ E++ F GR+ +
Sbjct: 187 VTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYI 231
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 92/181 (50%), Gaps = 24/181 (13%)
Query: 11 SCLDCELNFLSSV-NHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH--------- 60
S L E+ + + H NII L A + ++++VE+ + GNL Y+R
Sbjct: 85 SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSY 144
Query: 61 --GRVPEQ--TARKFLQ---QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADF 113
RVPE+ T + + QL G+E L S IHRDL N+L++ ++ ++KIADF
Sbjct: 145 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADF 201
Query: 114 GLSCTLYPGNYAEKVCGSPL---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFS 169
GL+ + + +K L +MAPE L + Y + D+WS G +++E+ G P+
Sbjct: 202 GLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP 261
Query: 170 G 170
G
Sbjct: 262 G 262
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 92/181 (50%), Gaps = 24/181 (13%)
Query: 11 SCLDCELNFLSSV-NHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH--------- 60
S L E+ + + H NII L A + ++++VE+ + GNL Y+R
Sbjct: 85 SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY 144
Query: 61 --GRVPEQ--TARKFLQ---QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADF 113
RVPE+ T + + QL G+E L S IHRDL N+L++ ++ ++KIADF
Sbjct: 145 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADF 201
Query: 114 GLSCTLYPGNYAEKVCGSPL---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFS 169
GL+ + + +K L +MAPE L + Y + D+WS G +++E+ G P+
Sbjct: 202 GLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP 261
Query: 170 G 170
G
Sbjct: 262 G 262
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 84/165 (50%), Gaps = 12/165 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENC------IFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
EL + VNH NII L + F + +++V+E NL I++ + +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL-MDANLCQVIQME--LDHERMS 129
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVC 129
L Q+ G++ L+S IIHRDLKP NI++ D LKI DFGL+ T E
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMEPEV 186
Query: 130 GSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
+ Y APEV+ Y E VD+WSVG I+ E++ F GR+ +
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYI 231
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 92/184 (50%), Gaps = 19/184 (10%)
Query: 9 LKSCLDC-----------ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYI 57
+K+C +C E + +HP+I++L EN +++++E C G L S++
Sbjct: 43 IKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFL 101
Query: 58 RLHGRVPEQTARK-FLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLS 116
++ + + + QL L L S +HRD+ N+L+S D +K+ DFGLS
Sbjct: 102 QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSND---CVKLGDFGLS 158
Query: 117 CTLYPGNYAEKVCGS-PL-YMAPEVLQFQRYDEKVDMWSVGAILFE-LLNGYPPFSGRNN 173
+ Y + G P+ +MAPE + F+R+ D+W G ++E L++G PF G N
Sbjct: 159 RYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 218
Query: 174 VQLI 177
+I
Sbjct: 219 NDVI 222
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 92/181 (50%), Gaps = 24/181 (13%)
Query: 11 SCLDCELNFLSSV-NHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH--------- 60
S L E+ + + H NII L A + ++++V + + GNL Y+R
Sbjct: 85 SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSY 144
Query: 61 --GRVPEQ--TARKFLQ---QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADF 113
RVPE+ T + + QL G+E L S IHRDL N+L++ ++ ++KIADF
Sbjct: 145 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADF 201
Query: 114 GLSCTLYPGNYAEKVCGSPL---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFS 169
GL+ + +Y +K L +MAPE L + Y + D+WS G +++E+ G P+
Sbjct: 202 GLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP 261
Query: 170 G 170
G
Sbjct: 262 G 262
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 84/165 (50%), Gaps = 12/165 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENC------IFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
EL + VNH NII L + F + +++V+E NL I++ + +
Sbjct: 75 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQME--LDHERMS 131
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVC 129
L Q+ G++ L+S IIHRDLKP NI++ D LKI DFGL+ T
Sbjct: 132 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMVPFV 188
Query: 130 GSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
+ Y APEV+ Y E VD+WSVG I+ E++ G F G +++
Sbjct: 189 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI 233
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 92/184 (50%), Gaps = 19/184 (10%)
Query: 9 LKSCLDC-----------ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYI 57
+K+C +C E + +HP+I++L EN +++++E C G L S++
Sbjct: 43 IKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFL 101
Query: 58 RLHGRVPEQTARK-FLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLS 116
++ + + + QL L L S +HRD+ N+L+S D +K+ DFGLS
Sbjct: 102 QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSND---CVKLGDFGLS 158
Query: 117 CTLYPGNYAEKVCGS-PL-YMAPEVLQFQRYDEKVDMWSVGAILFE-LLNGYPPFSGRNN 173
+ Y + G P+ +MAPE + F+R+ D+W G ++E L++G PF G N
Sbjct: 159 RYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 218
Query: 174 VQLI 177
+I
Sbjct: 219 NDVI 222
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 97/185 (52%), Gaps = 19/185 (10%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAE------NCIFLVVEFCAG 50
+KKL++ +S + EL L + H N+I L D F N ++LV G
Sbjct: 52 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-G 110
Query: 51 GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
+L++ ++ ++ + + + Q+ GL+ ++S IIHRDLKP N+ +++D LKI
Sbjct: 111 ADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKI 166
Query: 111 ADFGLSCTLYPGNYAEKVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
FGL+ + + + Y APE+ L + Y++ VD+WSVG I+ ELL G F
Sbjct: 167 LGFGLA--RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
Query: 170 GRNNV 174
G +++
Sbjct: 225 GTDHI 229
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 92/184 (50%), Gaps = 19/184 (10%)
Query: 9 LKSCLDC-----------ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYI 57
+K+C +C E + +HP+I++L EN +++++E C G L S++
Sbjct: 423 IKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFL 481
Query: 58 RLHG-RVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLS 116
++ + + + QL L L S +HRD+ N+L+S D +K+ DFGLS
Sbjct: 482 QVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSND---CVKLGDFGLS 538
Query: 117 CTLYPGNYAEKVCGS-PL-YMAPEVLQFQRYDEKVDMWSVGAILFE-LLNGYPPFSGRNN 173
+ Y + G P+ +MAPE + F+R+ D+W G ++E L++G PF G N
Sbjct: 539 RYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 598
Query: 174 VQLI 177
+I
Sbjct: 599 NDVI 602
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 107/212 (50%), Gaps = 31/212 (14%)
Query: 20 LSSVNHPNIIRLFD-----AFQAENCIFLVVEFCAGGNLSSYIRLHGR-------VPEQT 67
+ +HPN+IRL + Q +++ F G+L +Y+ L+ R +P QT
Sbjct: 90 MKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYL-LYSRLETGPKHIPLQT 148
Query: 68 ARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE- 126
KF+ + G+E L++ + +HRDL N +L DD+ + +ADFGLS +Y G+Y
Sbjct: 149 LLKFMVDIALGMEYLSNRNFLHRDLAARNCMLR---DDMTVCVADFGLSKKIYSGDYYRQ 205
Query: 127 -KVCGSPL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIVPALH- 182
++ P+ ++A E L + Y K D+W+ G ++E+ G P+ G N ++ LH
Sbjct: 206 GRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHG 265
Query: 183 ------PDCVDMCLKLL----SANTVDRLSFN 204
DC+D +++ + +DR +F+
Sbjct: 266 HRLKQPEDCLDELYEIMYSCWRTDPLDRPTFS 297
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 86/168 (51%), Gaps = 18/168 (10%)
Query: 16 ELNFLSSVNH-PNIIRLFDAFQAEN------CIFLVVEFCAGGNLSSYIR--LHGRVPEQ 66
E+N L +H NI + AF +N ++LV+EFC G+++ I+ + E+
Sbjct: 70 EINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEE 129
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL-YPGNYA 125
+++ GL L+ H +IHRD+K +N+LL+ ++ +K+ DFG+S L
Sbjct: 130 WIAYICREILRGLSHLHQHKVIHRDIKGQNVLLT---ENAEVKLVDFGVSAQLDRTVGRR 186
Query: 126 EKVCGSPLYMAPEVLQFQR-----YDEKVDMWSVGAILFELLNGYPPF 168
G+P +MAPEV+ YD K D+WS+G E+ G PP
Sbjct: 187 NTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPL 234
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 92/184 (50%), Gaps = 19/184 (10%)
Query: 9 LKSCLDC-----------ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYI 57
+K+C +C E + +HP+I++L EN +++++E C G L S++
Sbjct: 48 IKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFL 106
Query: 58 RLHGRVPEQTARK-FLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLS 116
++ + + + QL L L S +HRD+ N+L+S D +K+ DFGLS
Sbjct: 107 QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSND---CVKLGDFGLS 163
Query: 117 CTLYPGNYAEKVCGS-PL-YMAPEVLQFQRYDEKVDMWSVGAILFE-LLNGYPPFSGRNN 173
+ Y + G P+ +MAPE + F+R+ D+W G ++E L++G PF G N
Sbjct: 164 RYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 223
Query: 174 VQLI 177
+I
Sbjct: 224 NDVI 227
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 92/184 (50%), Gaps = 19/184 (10%)
Query: 9 LKSCLDC-----------ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYI 57
+K+C +C E + +HP+I++L EN +++++E C G L S++
Sbjct: 40 IKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFL 98
Query: 58 RLHGRVPEQTARK-FLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLS 116
++ + + + QL L L S +HRD+ N+L+S D +K+ DFGLS
Sbjct: 99 QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSND---CVKLGDFGLS 155
Query: 117 CTLYPGNYAEKVCGS-PL-YMAPEVLQFQRYDEKVDMWSVGAILFE-LLNGYPPFSGRNN 173
+ Y + G P+ +MAPE + F+R+ D+W G ++E L++G PF G N
Sbjct: 156 RYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 215
Query: 174 VQLI 177
+I
Sbjct: 216 NDVI 219
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 92/184 (50%), Gaps = 19/184 (10%)
Query: 9 LKSCLDC-----------ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYI 57
+K+C +C E + +HP+I++L EN +++++E C G L S++
Sbjct: 71 IKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFL 129
Query: 58 RLHGRVPEQTARK-FLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLS 116
++ + + + QL L L S +HRD+ N+L+S D +K+ DFGLS
Sbjct: 130 QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSND---CVKLGDFGLS 186
Query: 117 CTLYPGNYAEKVCGS-PL-YMAPEVLQFQRYDEKVDMWSVGAILFE-LLNGYPPFSGRNN 173
+ Y + G P+ +MAPE + F+R+ D+W G ++E L++G PF G N
Sbjct: 187 RYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 246
Query: 174 VQLI 177
+I
Sbjct: 247 NDVI 250
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 97/185 (52%), Gaps = 19/185 (10%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAE------NCIFLVVEFCAG 50
+KKL++ +S + EL L + H N+I L D F N ++LV G
Sbjct: 52 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-G 110
Query: 51 GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
+L++ ++ ++ + + + Q+ GL+ ++S IIHRDLKP N+ +++D LKI
Sbjct: 111 ADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKI 166
Query: 111 ADFGLSCTLYPGNYAEKVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
D GL+ + + + Y APE+ L + Y++ VD+WSVG I+ ELL G F
Sbjct: 167 LDAGLA--RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
Query: 170 GRNNV 174
G +++
Sbjct: 225 GTDHI 229
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 92/184 (50%), Gaps = 19/184 (10%)
Query: 9 LKSCLDC-----------ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYI 57
+K+C +C E + +HP+I++L EN +++++E C G L S++
Sbjct: 46 IKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFL 104
Query: 58 RLHGRVPEQTARK-FLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLS 116
++ + + + QL L L S +HRD+ N+L+S D +K+ DFGLS
Sbjct: 105 QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSND---CVKLGDFGLS 161
Query: 117 CTLYPGNYAEKVCGS-PL-YMAPEVLQFQRYDEKVDMWSVGAILFE-LLNGYPPFSGRNN 173
+ Y + G P+ +MAPE + F+R+ D+W G ++E L++G PF G N
Sbjct: 162 RYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 221
Query: 174 VQLI 177
+I
Sbjct: 222 NDVI 225
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 92/184 (50%), Gaps = 19/184 (10%)
Query: 9 LKSCLDC-----------ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYI 57
+K+C +C E + +HP+I++L EN +++++E C G L S++
Sbjct: 45 IKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFL 103
Query: 58 RLHGRVPEQTARK-FLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLS 116
++ + + + QL L L S +HRD+ N+L+S D +K+ DFGLS
Sbjct: 104 QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSND---CVKLGDFGLS 160
Query: 117 CTLYPGNYAEKVCGS-PL-YMAPEVLQFQRYDEKVDMWSVGAILFE-LLNGYPPFSGRNN 173
+ Y + G P+ +MAPE + F+R+ D+W G ++E L++G PF G N
Sbjct: 161 RYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 220
Query: 174 VQLI 177
+I
Sbjct: 221 NDVI 224
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 103/245 (42%), Gaps = 48/245 (19%)
Query: 17 LNFLSSVNHPNIIRLFDA-----FQAENCIFLVVEFCAGGNLSSYIRLHGR--VPEQTAR 69
L L + HPN++RL D E + LV E +L +Y+ +P +T +
Sbjct: 57 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIK 115
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVC 129
++Q GL+ L+++ I+HRDLKPENIL++ +K+ADFGL+ V
Sbjct: 116 DLMRQFLRGLDFLHANCIVHRDLKPENILVTS---GGTVKLADFGLARIYSYQMALAPVV 172
Query: 130 GSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNN---------------- 173
+ Y APEVL Y VDMWSVG I E+ P F G +
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE 232
Query: 174 ---------------------VQLIVPALHPDCVDMCLKLLSANTVDRLSFNEFYHHRFL 212
VQ +VP + + L++L+ N R+S H +L
Sbjct: 233 DDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
Query: 213 RRNSA 217
++
Sbjct: 293 HKDEG 297
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 96/185 (51%), Gaps = 19/185 (10%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAENCI------FLVVEFCAG 50
+KKL + +S L EL L + H N+I L D F + + +LV+ F G
Sbjct: 55 IKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-G 113
Query: 51 GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
+L ++ H ++ E + + Q+ GL +++ IIHRDLKP N+ +++D LKI
Sbjct: 114 TDLGKLMK-HEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNL---AVNEDCELKI 169
Query: 111 ADFGLSCTLYPGNYAEKVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
DFGL+ V + Y APEV L + RY + VD+WSVG I+ E++ G F
Sbjct: 170 LDFGLARQADSEMXGXVV--TRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFK 227
Query: 170 GRNNV 174
G +++
Sbjct: 228 GSDHL 232
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 108/250 (43%), Gaps = 58/250 (23%)
Query: 17 LNFLSSVNHPNIIRLFDA-----FQAENCIFLVVEFCAGGNLSSYIRLHGR--VPEQTAR 69
L L + HPN++RL D E + LV E +L +Y+ +P +T +
Sbjct: 65 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIK 123
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVC 129
++Q GL+ L+++ I+HRDLKPENIL++ +K+ADFGL+ Y+ ++
Sbjct: 124 DLMRQFLRGLDFLHANCIVHRDLKPENILVTS---GGTVKLADFGLARI-----YSYQMA 175
Query: 130 GSPL-----YMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNN----------- 173
+P+ Y APEVL Y VDMWSVG I E+ P F G +
Sbjct: 176 LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLI 235
Query: 174 --------------------------VQLIVPALHPDCVDMCLKLLSANTVDRLSFNEFY 207
VQ +VP + + L++L+ N R+S
Sbjct: 236 GLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRAL 295
Query: 208 HHRFLRRNSA 217
H +L ++
Sbjct: 296 QHSYLHKDEG 305
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 97/185 (52%), Gaps = 19/185 (10%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAE------NCIFLVVEFCAG 50
+KKL++ +S + EL L + H N+I L D F N ++LV G
Sbjct: 52 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-G 110
Query: 51 GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
+L++ ++ ++ + + + Q+ GL+ ++S IIHRDLKP N+ +++D LKI
Sbjct: 111 ADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKI 166
Query: 111 ADFGLSCTLYPGNYAEKVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
D GL+ + + + Y APE+ L + Y++ VD+WSVG I+ ELL G F
Sbjct: 167 LDRGLA--RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
Query: 170 GRNNV 174
G +++
Sbjct: 225 GTDHI 229
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 88/179 (49%), Gaps = 17/179 (9%)
Query: 16 ELNFL------SSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
EL+FL S +NH NI+R F+++E AGG+L S++R P Q +
Sbjct: 78 ELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 137
Query: 70 KFL-------QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPG 122
+ + + G + L +H IHRD+ N LL+ + KI DFG++ +Y
Sbjct: 138 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 197
Query: 123 NYAEKVCGSPL---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
+Y K + L +M PE + K D WS G +L+E+ + GY P+ ++N +++
Sbjct: 198 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 256
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 88/179 (49%), Gaps = 17/179 (9%)
Query: 16 ELNFL------SSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
EL+FL S +NH NI+R F+++E AGG+L S++R P Q +
Sbjct: 92 ELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 151
Query: 70 KFL-------QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPG 122
+ + + G + L +H IHRD+ N LL+ + KI DFG++ +Y
Sbjct: 152 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 211
Query: 123 NYAEKVCGSPL---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
+Y K + L +M PE + K D WS G +L+E+ + GY P+ ++N +++
Sbjct: 212 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 270
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 80.9 bits (198), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 97/185 (52%), Gaps = 19/185 (10%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAE------NCIFLVVEFCAG 50
+KKL++ +S + EL L + H N+I L D F N ++LV G
Sbjct: 52 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-G 110
Query: 51 GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
+L++ ++ ++ + + + Q+ GL+ ++S IIHRDLKP N+ +++D LKI
Sbjct: 111 ADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKI 166
Query: 111 ADFGLSCTLYPGNYAEKVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
D GL+ + + + Y APE+ L + Y++ VD+WSVG I+ ELL G F
Sbjct: 167 LDGGLA--RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
Query: 170 GRNNV 174
G +++
Sbjct: 225 GTDHI 229
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 80.9 bits (198), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 97/185 (52%), Gaps = 19/185 (10%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAE------NCIFLVVEFCAG 50
+KKL++ +S + EL L + H N+I L D F N ++LV G
Sbjct: 52 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-G 110
Query: 51 GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
+L++ ++ ++ + + + Q+ GL+ ++S IIHRDLKP N+ +++D LKI
Sbjct: 111 ADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKI 166
Query: 111 ADFGLSCTLYPGNYAEKVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
DF L+ + + + Y APE+ L + Y++ VD+WSVG I+ ELL G F
Sbjct: 167 LDFYLA--RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
Query: 170 GRNNV 174
G +++
Sbjct: 225 GTDHI 229
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 87/179 (48%), Gaps = 17/179 (9%)
Query: 16 ELNFL------SSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
EL+FL S NH NI+R F+++E AGG+L S++R P Q +
Sbjct: 94 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 153
Query: 70 KFL-------QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPG 122
+ + + G + L +H IHRD+ N LL+ + KI DFG++ +Y
Sbjct: 154 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 213
Query: 123 NYAEKVCGSPL---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
+Y K + L +M PE + K D WS G +L+E+ + GY P+ ++N +++
Sbjct: 214 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 272
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 87/179 (48%), Gaps = 17/179 (9%)
Query: 16 ELNFL------SSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
EL+FL S NH NI+R F+++E AGG+L S++R P Q +
Sbjct: 77 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSS 136
Query: 70 KFL-------QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPG 122
+ + + G + L +H IHRD+ N LL+ + KI DFG++ +Y
Sbjct: 137 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 196
Query: 123 NYAEKVCGSPL---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
+Y K + L +M PE + K D WS G +L+E+ + GY P+ ++N +++
Sbjct: 197 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 255
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 87/179 (48%), Gaps = 17/179 (9%)
Query: 16 ELNFL------SSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
EL+FL S NH NI+R F+++E AGG+L S++R P Q +
Sbjct: 77 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 136
Query: 70 KFL-------QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPG 122
+ + + G + L +H IHRD+ N LL+ + KI DFG++ +Y
Sbjct: 137 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 196
Query: 123 NYAEKVCGSPL---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
+Y K + L +M PE + K D WS G +L+E+ + GY P+ ++N +++
Sbjct: 197 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 255
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 87/179 (48%), Gaps = 17/179 (9%)
Query: 16 ELNFL------SSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
EL+FL S NH NI+R F+++E AGG+L S++R P Q +
Sbjct: 84 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 143
Query: 70 KFL-------QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPG 122
+ + + G + L +H IHRD+ N LL+ + KI DFG++ +Y
Sbjct: 144 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 203
Query: 123 NYAEKVCGSPL---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
+Y K + L +M PE + K D WS G +L+E+ + GY P+ ++N +++
Sbjct: 204 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 262
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 80.5 bits (197), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 87/179 (48%), Gaps = 17/179 (9%)
Query: 16 ELNFL------SSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
EL+FL S NH NI+R F+++E AGG+L S++R P Q +
Sbjct: 78 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 137
Query: 70 KFL-------QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPG 122
+ + + G + L +H IHRD+ N LL+ + KI DFG++ +Y
Sbjct: 138 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRA 197
Query: 123 NYAEKVCGSPL---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
+Y K + L +M PE + K D WS G +L+E+ + GY P+ ++N +++
Sbjct: 198 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 256
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 80.5 bits (197), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 87/179 (48%), Gaps = 17/179 (9%)
Query: 16 ELNFL------SSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
EL+FL S NH NI+R F+++E AGG+L S++R P Q +
Sbjct: 104 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 163
Query: 70 KFL-------QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPG 122
+ + + G + L +H IHRD+ N LL+ + KI DFG++ +Y
Sbjct: 164 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 223
Query: 123 NYAEKVCGSPL---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
+Y K + L +M PE + K D WS G +L+E+ + GY P+ ++N +++
Sbjct: 224 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 282
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 80.5 bits (197), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 11/167 (6%)
Query: 20 LSSVNHPNIIRLFD-AFQAENCIFLVVEFCAGGNLSSYIRLHGRVPE-QTARKFLQQLGA 77
+ +HPN++ L ++E +V+ + G+L ++IR P + F Q+
Sbjct: 85 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 144
Query: 78 GLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY--AEKVCGSPL-- 133
G++ L S +HRDL N +L D+ +K+ADFGL+ +Y Y G+ L
Sbjct: 145 GMKYLASKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 201
Query: 134 -YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIV 178
+MA E LQ Q++ K D+WS G +L+EL+ G PP+ N + V
Sbjct: 202 KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 248
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 80.5 bits (197), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 106/251 (42%), Gaps = 60/251 (23%)
Query: 17 LNFLSSVNHPNIIRLFDA-----FQAENCIFLVVEFCAGGNLSSYIRLHGR--VPEQTAR 69
L L + HPN++RL D E + LV E +L +Y+ +P +T +
Sbjct: 57 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIK 115
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLS------CTLYPGN 123
++Q GL+ L+++ I+HRDLKPENIL++ +K+ADFGL+ L+P
Sbjct: 116 DLMRQFLRGLDFLHANCIVHRDLKPENILVTS---GGTVKLADFGLARIYSYQMALFP-- 170
Query: 124 YAEKVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNN---------- 173
V + Y APEVL Y VDMWSVG I E+ P F G +
Sbjct: 171 ----VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDL 226
Query: 174 ---------------------------VQLIVPALHPDCVDMCLKLLSANTVDRLSFNEF 206
VQ +VP + + L++L+ N R+S
Sbjct: 227 IGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRA 286
Query: 207 YHHRFLRRNSA 217
H +L ++
Sbjct: 287 LQHSYLHKDEG 297
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 87/179 (48%), Gaps = 17/179 (9%)
Query: 16 ELNFL------SSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
EL+FL S NH NI+R F+++E AGG+L S++R P Q +
Sbjct: 78 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 137
Query: 70 KFL-------QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPG 122
+ + + G + L +H IHRD+ N LL+ + KI DFG++ +Y
Sbjct: 138 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 197
Query: 123 NYAEKVCGSPL---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
+Y K + L +M PE + K D WS G +L+E+ + GY P+ ++N +++
Sbjct: 198 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 256
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 99/239 (41%), Gaps = 45/239 (18%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E+ L + H NI+RL D ++ + LV EFC + +G + + + FL QL
Sbjct: 51 EICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQL 110
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL-YPGNYAEKVCGSPLY 134
GL +S +++HRDLKP+N+L ++ + LK+A+FGL+ P + Y
Sbjct: 111 LKGLGFCHSRNVLHRDLKPQNLL---INRNGELKLANFGLARAFGIPVRCYSAEVVTLWY 167
Query: 135 MAPEVL-QFQRYDEKVDMWSVGAILFELLNG----------------------------- 164
P+VL + Y +DMWS G I EL N
Sbjct: 168 RPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQW 227
Query: 165 -----------YPPFSGRNNVQLIVPALHPDCVDMCLKLLSANTVDRLSFNEFYHHRFL 212
YP + ++ +VP L+ D+ LL N V R+S E H +
Sbjct: 228 PSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYF 286
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 11/167 (6%)
Query: 20 LSSVNHPNIIRLFD-AFQAENCIFLVVEFCAGGNLSSYIRLHGRVPE-QTARKFLQQLGA 77
+ +HPN++ L ++E +V+ + G+L ++IR P + F Q+
Sbjct: 77 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 136
Query: 78 GLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY--AEKVCGSPL-- 133
G++ L S +HRDL N +L D+ +K+ADFGL+ +Y Y G+ L
Sbjct: 137 GMKYLASKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 193
Query: 134 -YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIV 178
+MA E LQ Q++ K D+WS G +L+EL+ G PP+ N + V
Sbjct: 194 KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 240
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 11/167 (6%)
Query: 20 LSSVNHPNIIRLFD-AFQAENCIFLVVEFCAGGNLSSYIRLHGRVPE-QTARKFLQQLGA 77
+ +HPN++ L ++E +V+ + G+L ++IR P + F Q+
Sbjct: 80 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 139
Query: 78 GLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY--AEKVCGSPL-- 133
G++ L S +HRDL N +L D+ +K+ADFGL+ +Y Y G+ L
Sbjct: 140 GMKYLASKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 196
Query: 134 -YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIV 178
+MA E LQ Q++ K D+WS G +L+EL+ G PP+ N + V
Sbjct: 197 KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 243
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 87/179 (48%), Gaps = 17/179 (9%)
Query: 16 ELNFL------SSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
EL+FL S NH NI+R F+++E AGG+L S++R P Q +
Sbjct: 69 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 128
Query: 70 KFL-------QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPG 122
+ + + G + L +H IHRD+ N LL+ + KI DFG++ +Y
Sbjct: 129 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 188
Query: 123 NYAEKVCGSPL---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
+Y K + L +M PE + K D WS G +L+E+ + GY P+ ++N +++
Sbjct: 189 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 247
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 11/167 (6%)
Query: 20 LSSVNHPNIIRLFD-AFQAENCIFLVVEFCAGGNLSSYIRLHGRVPE-QTARKFLQQLGA 77
+ +HPN++ L ++E +V+ + G+L ++IR P + F Q+
Sbjct: 83 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 142
Query: 78 GLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY--AEKVCGSPL-- 133
G++ L S +HRDL N +L D+ +K+ADFGL+ +Y Y G+ L
Sbjct: 143 GMKYLASKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 199
Query: 134 -YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIV 178
+MA E LQ Q++ K D+WS G +L+EL+ G PP+ N + V
Sbjct: 200 KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 246
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 11/167 (6%)
Query: 20 LSSVNHPNIIRLFD-AFQAENCIFLVVEFCAGGNLSSYIRLHGRVPE-QTARKFLQQLGA 77
+ +HPN++ L ++E +V+ + G+L ++IR P + F Q+
Sbjct: 84 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 143
Query: 78 GLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY--AEKVCGSPL-- 133
G++ L S +HRDL N +L D+ +K+ADFGL+ +Y Y G+ L
Sbjct: 144 GMKYLASKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 200
Query: 134 -YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIV 178
+MA E LQ Q++ K D+WS G +L+EL+ G PP+ N + V
Sbjct: 201 KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 247
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 101/212 (47%), Gaps = 25/212 (11%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL--- 72
E + + HPN+++L E ++++EF GNL Y+R R E +A L
Sbjct: 57 EAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNR-QEVSAVVLLYMA 115
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSP 132
Q+ + +E L + IHRDL N L+ ++ ++K+ADFGLS L G+ G+
Sbjct: 116 TQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLS-RLMTGDTXTAHAGAK 171
Query: 133 L---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIVPALHPD---- 184
+ APE L + ++ K D+W+ G +L+E+ G P+ G + Q + L D
Sbjct: 172 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQ-VYELLEKDYRME 230
Query: 185 ----CVDMCLKLLSA----NTVDRLSFNEFYH 208
C + +L+ A N DR SF E +
Sbjct: 231 RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 262
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 11/167 (6%)
Query: 20 LSSVNHPNIIRLFD-AFQAENCIFLVVEFCAGGNLSSYIRLHGRVPE-QTARKFLQQLGA 77
+ +HPN++ L ++E +V+ + G+L ++IR P + F Q+
Sbjct: 104 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 163
Query: 78 GLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY--AEKVCGSPL-- 133
G++ L S +HRDL N +L D+ +K+ADFGL+ +Y Y G+ L
Sbjct: 164 GMKYLASKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 220
Query: 134 -YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIV 178
+MA E LQ Q++ K D+WS G +L+EL+ G PP+ N + V
Sbjct: 221 KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 267
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 83/165 (50%), Gaps = 12/165 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENC------IFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
EL + VNH NII L + F + +++V+E NL I++ + +
Sbjct: 67 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL-MDANLCQVIQME--LDHERMS 123
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVC 129
L Q+ G++ L+S IIHRDLKP NI++ D LKI DFGL+ T
Sbjct: 124 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYV 180
Query: 130 GSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
+ Y APEV+ Y E VD+WSVG I+ E++ F GR+ +
Sbjct: 181 VTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYI 225
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 11/167 (6%)
Query: 20 LSSVNHPNIIRLFD-AFQAENCIFLVVEFCAGGNLSSYIRLHGRVPE-QTARKFLQQLGA 77
+ +HPN++ L ++E +V+ + G+L ++IR P + F Q+
Sbjct: 82 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 141
Query: 78 GLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY--AEKVCGSPL-- 133
G++ L S +HRDL N +L D+ +K+ADFGL+ +Y Y G+ L
Sbjct: 142 GMKYLASKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 198
Query: 134 -YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIV 178
+MA E LQ Q++ K D+WS G +L+EL+ G PP+ N + V
Sbjct: 199 KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 245
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 87/179 (48%), Gaps = 17/179 (9%)
Query: 16 ELNFL------SSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
EL+FL S NH NI+R F+++E AGG+L S++R P Q +
Sbjct: 92 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSS 151
Query: 70 KFL-------QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPG 122
+ + + G + L +H IHRD+ N LL+ + KI DFG++ +Y
Sbjct: 152 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 211
Query: 123 NYAEKVCGSPL---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
+Y K + L +M PE + K D WS G +L+E+ + GY P+ ++N +++
Sbjct: 212 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 270
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 101/232 (43%), Gaps = 26/232 (11%)
Query: 3 KKLNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGR 62
K+ NK + LD L S + P I++ F F +F+ +E R+ G
Sbjct: 64 KEENKRILMDLDV---VLKSHDCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGP 120
Query: 63 VPEQTARKFLQQLGAGLEILNSHH-IIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYP 121
+PE+ K + L L H +IHRD+KP NILL D+ +K+ DFG+S L
Sbjct: 121 IPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILL---DERGQIKLCDFGISGRLVD 177
Query: 122 GNYAEKVCGSPLYMAPEVLQ-----FQRYDEKVDMWSVGAILFELLNGYPPFSG-RNNVQ 175
++ G YMAPE + YD + D+WS+G L EL G P+ + + +
Sbjct: 178 DKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFE 237
Query: 176 LIV------PALHP-------DCVDMCLKLLSANTVDRLSFNEFYHHRFLRR 214
++ P L P D L+ + R +N+ H F++R
Sbjct: 238 VLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKR 289
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 11/167 (6%)
Query: 20 LSSVNHPNIIRLFD-AFQAENCIFLVVEFCAGGNLSSYIRLHGRVPE-QTARKFLQQLGA 77
+ +HPN++ L ++E +V+ + G+L ++IR P + F Q+
Sbjct: 103 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 162
Query: 78 GLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY--AEKVCGSPL-- 133
G++ L S +HRDL N +L D+ +K+ADFGL+ +Y Y G+ L
Sbjct: 163 GMKYLASKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 219
Query: 134 -YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIV 178
+MA E LQ Q++ K D+WS G +L+EL+ G PP+ N + V
Sbjct: 220 KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 266
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 11/167 (6%)
Query: 20 LSSVNHPNIIRLFD-AFQAENCIFLVVEFCAGGNLSSYIRLHGRVPE-QTARKFLQQLGA 77
+ +HPN++ L ++E +V+ + G+L ++IR P + F Q+
Sbjct: 85 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 144
Query: 78 GLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY--AEKVCGSPL-- 133
G++ L S +HRDL N +L D+ +K+ADFGL+ +Y Y G+ L
Sbjct: 145 GMKYLASKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 201
Query: 134 -YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIV 178
+MA E LQ Q++ K D+WS G +L+EL+ G PP+ N + V
Sbjct: 202 KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 248
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 91/183 (49%), Gaps = 28/183 (15%)
Query: 11 SCLDCELNFLSSV-NHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVP----- 64
S L E+ + + H NII L A + ++++VE+ + GNL Y L R P
Sbjct: 78 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY--LQARRPPGLEF 135
Query: 65 ---------EQTARKFL----QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIA 111
EQ + K L Q+ G+E L S IHRDL N+L++ +D ++KIA
Sbjct: 136 SFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIA 192
Query: 112 DFGLSCTLYPGNYAEKVCGSPL---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPP 167
DFGL+ ++ + +K L +MAPE L + Y + D+WS G +L+E+ G P
Sbjct: 193 DFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 252
Query: 168 FSG 170
+ G
Sbjct: 253 YPG 255
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 87/179 (48%), Gaps = 17/179 (9%)
Query: 16 ELNFL------SSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
EL+FL S NH NI+R F+++E AGG+L S++R P Q +
Sbjct: 92 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 151
Query: 70 KFL-------QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPG 122
+ + + G + L +H IHRD+ N LL+ + KI DFG++ +Y
Sbjct: 152 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 211
Query: 123 NYAEKVCGSPL---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
+Y K + L +M PE + K D WS G +L+E+ + GY P+ ++N +++
Sbjct: 212 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 270
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 86/179 (48%), Gaps = 17/179 (9%)
Query: 16 ELNFL------SSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
EL+FL S NH NI+R F+++E AGG+L S++R P Q +
Sbjct: 95 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 154
Query: 70 KFL-------QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPG 122
+ + + G + L +H IHRD+ N LL+ + KI DFG++ +Y
Sbjct: 155 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 214
Query: 123 NYAEKVCGSPL---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
Y K + L +M PE + K D WS G +L+E+ + GY P+ ++N +++
Sbjct: 215 GYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 273
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 80.1 bits (196), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 86/179 (48%), Gaps = 17/179 (9%)
Query: 16 ELNFL------SSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
EL+FL S NH NI+R F+++E AGG+L S++R P Q +
Sbjct: 118 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 177
Query: 70 KFL-------QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPG 122
+ + + G + L +H IHRD+ N LL+ + KI DFG++ +Y
Sbjct: 178 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 237
Query: 123 NYAEKVCGSPL---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
Y K + L +M PE + K D WS G +L+E+ + GY P+ ++N +++
Sbjct: 238 GYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 296
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 80.1 bits (196), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 83/165 (50%), Gaps = 12/165 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENC------IFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
EL + VNH NII L + F + +++V+E NL I++ + +
Sbjct: 78 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL-MDANLCQVIQME--LDHERMS 134
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVC 129
L Q+ G++ L+S IIHRDLKP NI++ D LKI DFGL+ T
Sbjct: 135 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYV 191
Query: 130 GSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
+ Y APEV+ Y E VD+WSVG I+ E++ F GR+ +
Sbjct: 192 VTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYI 236
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 80.1 bits (196), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 23/211 (10%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL--- 72
E + + HPN+++L E ++++EF GNL Y+R R E +A L
Sbjct: 59 EAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNR-QEVSAVVLLYMA 117
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGS- 131
Q+ + +E L + IHRDL N L+ ++ ++K+ADFGLS + Y
Sbjct: 118 TQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMTGDTYTAHAGAKF 174
Query: 132 PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIVPALHPD----- 184
P+ + APE L + ++ K D+W+ G +L+E+ G P+ G + Q + L D
Sbjct: 175 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMER 233
Query: 185 ---CVDMCLKLLSA----NTVDRLSFNEFYH 208
C + +L+ A N DR SF E +
Sbjct: 234 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 264
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 90/184 (48%), Gaps = 34/184 (18%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENC------------IFLVVEFCAGGNLSSYIRLHGRV 63
E+ L+ + HP I+R F+A+ +N +++ ++ C NL ++ +
Sbjct: 53 EVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTI 112
Query: 64 PEQTARKFLQ---QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLY 120
E+ L Q+ +E L+S ++HRDLKP NI + +DD ++K+ DFGL +
Sbjct: 113 EERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFT-MDD--VVKVGDFGLVTAMD 169
Query: 121 PGNYAEKV-------------CGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPP 167
+ V G+ LYM+PE + Y KVD++S+G ILFELL P
Sbjct: 170 QDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---P 226
Query: 168 FSGR 171
FS +
Sbjct: 227 FSTQ 230
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 110/244 (45%), Gaps = 38/244 (15%)
Query: 1 MLKKLNKHLK-SCLDCELNFLSSVNHP-NIIRLFDA-FQAENCIFLVVEFCAGGNLSSYI 57
MLK+ H + L EL L + H N++ L A + + ++VEFC GNLS+Y+
Sbjct: 66 MLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 125
Query: 58 RL-------HGRVPEQTARKFLQ---------QLGAGLEILNSHHIIHRDLKPENILLSG 101
R + PE + FL Q+ G+E L S IHRDL NILLS
Sbjct: 126 RSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS- 184
Query: 102 LDDDVMLKIADFGLSCTLYPG-NYAEKVCGS-PL-YMAPEVLQFQRYDEKVDMWSVGAIL 158
+ ++KI DFGL+ +Y +Y K PL +MAPE + + Y + D+WS G +L
Sbjct: 185 --EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 242
Query: 159 FELLN-GYPPFSG-----------RNNVQLIVPA-LHPDCVDMCLKLLSANTVDRLSFNE 205
+E+ + G P+ G + ++ P P+ L R +F+E
Sbjct: 243 WEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSE 302
Query: 206 FYHH 209
H
Sbjct: 303 LVEH 306
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 100/212 (47%), Gaps = 25/212 (11%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL--- 72
E + + HPN+++L E +++ EF GNL Y+R R E +A L
Sbjct: 57 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVSAVVLLYMA 115
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSP 132
Q+ + +E L + IHRDL N L+ ++ ++K+ADFGLS L G+ G+
Sbjct: 116 TQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLS-RLMTGDTXTAHAGAK 171
Query: 133 L---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIVPALHPD---- 184
+ APE L + ++ K D+W+ G +L+E+ G P+ G + Q + L D
Sbjct: 172 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQ-VYELLEKDYRME 230
Query: 185 ----CVDMCLKLLSA----NTVDRLSFNEFYH 208
C + +L+ A N DR SF E +
Sbjct: 231 RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 262
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 23/211 (10%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL--- 72
E + + HPN+++L E ++++EF GNL Y+R R E +A L
Sbjct: 59 EAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNR-QEVSAVVLLYMA 117
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGS- 131
Q+ + +E L + IHRDL N L+ ++ ++K+ADFGLS + Y
Sbjct: 118 TQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMTGDTYTAHAGAKF 174
Query: 132 PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIVPALHPD----- 184
P+ + APE L + ++ K D+W+ G +L+E+ G P+ G + Q + L D
Sbjct: 175 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMER 233
Query: 185 ---CVDMCLKLLSA----NTVDRLSFNEFYH 208
C + +L+ A N DR SF E +
Sbjct: 234 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 264
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 99/199 (49%), Gaps = 39/199 (19%)
Query: 11 SCLDCELNFLSSVNHPNIIRLFDAF-------------QAENCIFLVVEFCAGGNLSSYI 57
S + E+ L+S+NH ++R + A+ + ++ +F+ +E+C G L Y
Sbjct: 47 STILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTL--YD 104
Query: 58 RLHGRVPEQTARKF---LQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFG 114
+H Q ++ +Q+ L ++S IIHRDLKP NI +D+ +KI DFG
Sbjct: 105 LIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIF---IDESRNVKIGDFG 161
Query: 115 LSCTLY-------------PGNYA--EKVCGSPLYMAPEVLQFQ-RYDEKVDMWSVGAIL 158
L+ ++ PG+ G+ +Y+A EVL Y+EK+DM+S+G I
Sbjct: 162 LAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIF 221
Query: 159 FELLNGYPPFSGRNNVQLI 177
FE++ YP +G V ++
Sbjct: 222 FEMI--YPFSTGMERVNIL 238
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 85/167 (50%), Gaps = 11/167 (6%)
Query: 20 LSSVNHPNIIRLFD-AFQAENCIFLVVEFCAGGNLSSYIRLHGRVPE-QTARKFLQQLGA 77
+ +HPN++ L ++E +V+ + G+L ++IR P + F Q+
Sbjct: 85 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 144
Query: 78 GLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY--AEKVCGSPL-- 133
G++ L S +HRDL N +L D+ +K+ADFGL+ +Y + G+ L
Sbjct: 145 GMKFLASKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 201
Query: 134 -YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIV 178
+MA E LQ Q++ K D+WS G +L+EL+ G PP+ N + V
Sbjct: 202 KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 248
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 106/195 (54%), Gaps = 31/195 (15%)
Query: 16 ELNFLSSVNHPNIIRLFD--------------AFQAENCIFLVVEFCAGGNLSSYIRLHG 61
E+ + ++H NI+++F+ + N +++V E+ +L++ + G
Sbjct: 58 EIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMET-DLANVLE-QG 115
Query: 62 RVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYP 121
+ E+ AR F+ QL GL+ ++S +++HRDLKP N+ ++ +D++LKI DFGL+ + P
Sbjct: 116 PLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFIN--TEDLVLKIGDFGLARIMDP 173
Query: 122 -----GNYAEKVCGSPLYMAPE-VLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRN--- 172
G+ +E + + Y +P +L Y + +DMW+ G I E+L G F+G +
Sbjct: 174 HYSHKGHLSEGLV-TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELE 232
Query: 173 NVQLI---VPALHPD 184
+QLI +P +H +
Sbjct: 233 QMQLILESIPVVHEE 247
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 104/224 (46%), Gaps = 36/224 (16%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHG--------RVPEQT 67
E L+++ H +I++ + + + +V E+ G+L+ ++R HG P Q
Sbjct: 67 EAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQA 126
Query: 68 ARKF--------LQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL 119
+ Q+ +G+ L S H +HRDL N L+ ++++KI DFG+S +
Sbjct: 127 KGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGA---NLLVKIGDFGMSRDV 183
Query: 120 YPGNYAEKVCGSPL----YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNV 174
Y +Y +V G + +M PE + ++++ + D+WS G IL+E+ G P+ +N
Sbjct: 184 YSTDYY-RVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNT 242
Query: 175 QLIV----------PALHPDCV-DMCLKLLSANTVDRLSFNEFY 207
++I P + P V D+ L RL+ E Y
Sbjct: 243 EVIECITQGRVLERPRVCPKEVYDVMLGCWQREPQQRLNIKEIY 286
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 85/167 (50%), Gaps = 11/167 (6%)
Query: 20 LSSVNHPNIIRLFD-AFQAENCIFLVVEFCAGGNLSSYIRLHGRVPE-QTARKFLQQLGA 77
+ +HPN++ L ++E +V+ + G+L ++IR P + F Q+
Sbjct: 83 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 142
Query: 78 GLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY--AEKVCGSPL-- 133
G++ L S +HRDL N +L D+ +K+ADFGL+ +Y + G+ L
Sbjct: 143 GMKFLASKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 199
Query: 134 -YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIV 178
+MA E LQ Q++ K D+WS G +L+EL+ G PP+ N + V
Sbjct: 200 KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 246
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 85/167 (50%), Gaps = 11/167 (6%)
Query: 20 LSSVNHPNIIRLFD-AFQAENCIFLVVEFCAGGNLSSYIRLHGRVPE-QTARKFLQQLGA 77
+ +HPN++ L ++E +V+ + G+L ++IR P + F Q+
Sbjct: 90 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 149
Query: 78 GLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY--AEKVCGSPL-- 133
G++ L S +HRDL N +L D+ +K+ADFGL+ +Y + G+ L
Sbjct: 150 GMKFLASKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 206
Query: 134 -YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIV 178
+MA E LQ Q++ K D+WS G +L+EL+ G PP+ N + V
Sbjct: 207 KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 253
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 85/167 (50%), Gaps = 11/167 (6%)
Query: 20 LSSVNHPNIIRLFD-AFQAENCIFLVVEFCAGGNLSSYIRLHGRVPE-QTARKFLQQLGA 77
+ +HPN++ L ++E +V+ + G+L ++IR P + F Q+
Sbjct: 85 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 144
Query: 78 GLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY--AEKVCGSPL-- 133
G++ L S +HRDL N +L D+ +K+ADFGL+ +Y + G+ L
Sbjct: 145 GMKFLASKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 201
Query: 134 -YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIV 178
+MA E LQ Q++ K D+WS G +L+EL+ G PP+ N + V
Sbjct: 202 KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 248
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 85/167 (50%), Gaps = 11/167 (6%)
Query: 20 LSSVNHPNIIRLFD-AFQAENCIFLVVEFCAGGNLSSYIRLHGRVPE-QTARKFLQQLGA 77
+ +HPN++ L ++E +V+ + G+L ++IR P + F Q+
Sbjct: 86 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 145
Query: 78 GLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY--AEKVCGSPL-- 133
G++ L S +HRDL N +L D+ +K+ADFGL+ +Y + G+ L
Sbjct: 146 GMKFLASKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 202
Query: 134 -YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIV 178
+MA E LQ Q++ K D+WS G +L+EL+ G PP+ N + V
Sbjct: 203 KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 249
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 100/212 (47%), Gaps = 25/212 (11%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL--- 72
E + + HPN+++L E ++++EF GNL Y+R R E A L
Sbjct: 60 EAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNR-QEVNAVVLLYMA 118
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSP 132
Q+ + +E L + IHRDL N L+ ++ ++K+ADFGLS L G+ G+
Sbjct: 119 TQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLS-RLMTGDTXTAHAGAK 174
Query: 133 L---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIVPALHPD---- 184
+ APE L + ++ K D+W+ G +L+E+ G P+ G + Q + L D
Sbjct: 175 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRME 233
Query: 185 ----CVDMCLKLLSA----NTVDRLSFNEFYH 208
C + +L+ A N DR SF E +
Sbjct: 234 RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 265
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 87/169 (51%), Gaps = 9/169 (5%)
Query: 15 CELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH-GRVPEQTARKFLQ 73
CE + + +HPN++ L + +V+EF G L +++R H G+ L+
Sbjct: 93 CEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLR 152
Query: 74 QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLY---PGNYAEKVCG 130
+ AG+ L +HRDL NIL ++ +++ K++DFGLS + Y
Sbjct: 153 GIAAGMRYLADMGYVHRDLAARNIL---VNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGK 209
Query: 131 SPL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
P+ + APE +Q++++ D+WS G +++E+++ G P+ +N +I
Sbjct: 210 IPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI 258
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 23/211 (10%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL--- 72
E + + HPN+++L E ++++EF GNL Y+R R E A L
Sbjct: 64 EAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNR-QEVNAVVLLYMA 122
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGS- 131
Q+ + +E L + IHRDL N L+ ++ ++K+ADFGLS + Y
Sbjct: 123 TQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMTGDTYTAHAGAKF 179
Query: 132 PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIVPALHPD----- 184
P+ + APE L + ++ K D+W+ G +L+E+ G P+ G + Q + L D
Sbjct: 180 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMER 238
Query: 185 ---CVDMCLKLLSA----NTVDRLSFNEFYH 208
C + +L+ A N DR SF E +
Sbjct: 239 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 269
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 23/211 (10%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL--- 72
E + + HPN+++L E +++ EF GNL Y+R R E +A L
Sbjct: 59 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVSAVVLLYMA 117
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGS- 131
Q+ + +E L + IHRDL N L+ ++ ++K+ADFGLS + Y
Sbjct: 118 TQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMTGDTYTAHAGAKF 174
Query: 132 PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIVPALHPD----- 184
P+ + APE L + ++ K D+W+ G +L+E+ G P+ G + Q + L D
Sbjct: 175 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMER 233
Query: 185 ---CVDMCLKLLSA----NTVDRLSFNEFYH 208
C + +L+ A N DR SF E +
Sbjct: 234 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 264
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 91/184 (49%), Gaps = 19/184 (10%)
Query: 9 LKSCLDC-----------ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYI 57
+K+C +C E + +HP+I++L EN +++++E C G L S++
Sbjct: 43 IKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFL 101
Query: 58 RLHG-RVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLS 116
++ + + + QL L L S +HRD+ N+L+S D +K+ DFGLS
Sbjct: 102 QVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSND---CVKLGDFGLS 158
Query: 117 CTLYPGNYAEKVCGS-PL-YMAPEVLQFQRYDEKVDMWSVGAILFE-LLNGYPPFSGRNN 173
+ + G P+ +MAPE + F+R+ D+W G ++E L++G PF G N
Sbjct: 159 RYMEDSTXXKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 218
Query: 174 VQLI 177
+I
Sbjct: 219 NDVI 222
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 109/244 (44%), Gaps = 38/244 (15%)
Query: 1 MLKKLNKHLK-SCLDCELNFLSSVNHP-NIIRLFDA-FQAENCIFLVVEFCAGGNLSSYI 57
MLK+ H + L EL L + H N++ L A + + ++VEFC GNLS+Y+
Sbjct: 64 MLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 123
Query: 58 RL-------HGRVPEQTARKFLQ---------QLGAGLEILNSHHIIHRDLKPENILLSG 101
R + PE + FL Q+ G+E L S IHRDL NILLS
Sbjct: 124 RSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS- 182
Query: 102 LDDDVMLKIADFGLSCTLY--PGNYAEKVCGSPL-YMAPEVLQFQRYDEKVDMWSVGAIL 158
+ ++KI DFGL+ +Y P + PL +MAPE + + Y + D+WS G +L
Sbjct: 183 --EKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 240
Query: 159 FELLN-GYPPFSG-----------RNNVQLIVPA-LHPDCVDMCLKLLSANTVDRLSFNE 205
+E+ + G P+ G + ++ P P+ L R +F+E
Sbjct: 241 WEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSE 300
Query: 206 FYHH 209
H
Sbjct: 301 LVEH 304
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 23/211 (10%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL--- 72
E + + HPN+++L E +++ EF GNL Y+R R E +A L
Sbjct: 59 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVSAVVLLYMA 117
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGS- 131
Q+ + +E L + IHRDL N L+ ++ ++K+ADFGLS + Y
Sbjct: 118 TQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMTGDTYTAHAGAKF 174
Query: 132 PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIVPALHPD----- 184
P+ + APE L + ++ K D+W+ G +L+E+ G P+ G + Q + L D
Sbjct: 175 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMER 233
Query: 185 ---CVDMCLKLLSA----NTVDRLSFNEFYH 208
C + +L+ A N DR SF E +
Sbjct: 234 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 264
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 85/167 (50%), Gaps = 11/167 (6%)
Query: 20 LSSVNHPNIIRLFD-AFQAENCIFLVVEFCAGGNLSSYIRLHGRVPE-QTARKFLQQLGA 77
+ +HPN++ L ++E +V+ + G+L ++IR P + F Q+
Sbjct: 144 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 203
Query: 78 GLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY--AEKVCGSPL-- 133
G++ L S +HRDL N +L D+ +K+ADFGL+ +Y + G+ L
Sbjct: 204 GMKFLASKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 260
Query: 134 -YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIV 178
+MA E LQ Q++ K D+WS G +L+EL+ G PP+ N + V
Sbjct: 261 KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 307
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 23/211 (10%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL--- 72
E + + HPN+++L E +++ EF GNL Y+R R E +A L
Sbjct: 64 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVSAVVLLYMA 122
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGS- 131
Q+ + +E L + IHRDL N L+ ++ ++K+ADFGLS + Y
Sbjct: 123 TQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMTGDTYTAHAGAKF 179
Query: 132 PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIVPALHPD----- 184
P+ + APE L + ++ K D+W+ G +L+E+ G P+ G + Q + L D
Sbjct: 180 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMER 238
Query: 185 ---CVDMCLKLLSA----NTVDRLSFNEFYH 208
C + +L+ A N DR SF E +
Sbjct: 239 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 269
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 100/212 (47%), Gaps = 25/212 (11%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL--- 72
E + + HPN+++L E +++ EF GNL Y+R R E +A L
Sbjct: 57 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVSAVVLLYMA 115
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSP 132
Q+ + +E L + IHRDL N L+ ++ ++K+ADFGLS L G+ G+
Sbjct: 116 TQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLS-RLMTGDTFTAHAGAK 171
Query: 133 L---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIVPALHPD---- 184
+ APE L + ++ K D+W+ G +L+E+ G P+ G + Q + L D
Sbjct: 172 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQ-VYELLEKDYRME 230
Query: 185 ----CVDMCLKLLSA----NTVDRLSFNEFYH 208
C + +L+ A N DR SF E +
Sbjct: 231 RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 262
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 88/168 (52%), Gaps = 9/168 (5%)
Query: 15 CELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH--GRVPEQTARKFL 72
E N + ++ H +++L A + I+++ EF A G+L +++ + P F
Sbjct: 59 AEANVMKTLQHDKLVKL-HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFS 117
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY-AEKVCGS 131
Q+ G+ + + IHRDL+ NIL+S ++ KIADFGL+ + Y A +
Sbjct: 118 AQIAEGMAFIEQRNYIHRDLRAANILVSA---SLVCKIADFGLARVIEDNEYTAREGAKF 174
Query: 132 PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
P+ + APE + F + K D+WS G +L E++ G P+ G +N ++I
Sbjct: 175 PIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI 222
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 84/167 (50%), Gaps = 9/167 (5%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH-GRVPEQTARKFLQQ 74
E + ++HP +++L+ + I LV EF G LS Y+R G +T
Sbjct: 52 EAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLD 111
Query: 75 LGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPL- 133
+ G+ L +IHRDL N L+ ++ ++K++DFG++ + Y G+
Sbjct: 112 VCEGMAYLEEASVIHRDLAARNCLVG---ENQVIKVSDFGMTRFVLDDQYTSST-GTKFP 167
Query: 134 --YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
+ +PEV F RY K D+WS G +++E+ + G P+ R+N +++
Sbjct: 168 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV 214
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 110/244 (45%), Gaps = 38/244 (15%)
Query: 1 MLKKLNKHLK-SCLDCELNFLSSVNHP-NIIRLFDA-FQAENCIFLVVEFCAGGNLSSYI 57
MLK+ H + L EL L + H N++ L A + + ++VEFC GNLS+Y+
Sbjct: 64 MLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 123
Query: 58 RL-------HGRVPEQTARKFLQ---------QLGAGLEILNSHHIIHRDLKPENILLSG 101
R + PE + FL Q+ G+E L S IHRDL NILLS
Sbjct: 124 RSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS- 182
Query: 102 LDDDVMLKIADFGLSCTLYPG-NYAEKVCGS-PL-YMAPEVLQFQRYDEKVDMWSVGAIL 158
+ ++KI DFGL+ +Y +Y K PL +MAPE + + Y + D+WS G +L
Sbjct: 183 --EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 240
Query: 159 FELLN-GYPPFSG-----------RNNVQLIVPA-LHPDCVDMCLKLLSANTVDRLSFNE 205
+E+ + G P+ G + ++ P P+ L R +F+E
Sbjct: 241 WEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSE 300
Query: 206 FYHH 209
H
Sbjct: 301 LVEH 304
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 110/244 (45%), Gaps = 38/244 (15%)
Query: 1 MLKKLNKHLK-SCLDCELNFLSSVNHP-NIIRLFDA-FQAENCIFLVVEFCAGGNLSSYI 57
MLK+ H + L EL L + H N++ L A + + ++VEFC GNLS+Y+
Sbjct: 101 MLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 160
Query: 58 RL-------HGRVPEQTARKFLQ---------QLGAGLEILNSHHIIHRDLKPENILLSG 101
R + PE + FL Q+ G+E L S IHRDL NILLS
Sbjct: 161 RSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS- 219
Query: 102 LDDDVMLKIADFGLSCTLYPG-NYAEKVCGS-PL-YMAPEVLQFQRYDEKVDMWSVGAIL 158
+ ++KI DFGL+ +Y +Y K PL +MAPE + + Y + D+WS G +L
Sbjct: 220 --EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 277
Query: 159 FELLN-GYPPFSG-----------RNNVQLIVPA-LHPDCVDMCLKLLSANTVDRLSFNE 205
+E+ + G P+ G + ++ P P+ L R +F+E
Sbjct: 278 WEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSE 337
Query: 206 FYHH 209
H
Sbjct: 338 LVEH 341
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 86/179 (48%), Gaps = 22/179 (12%)
Query: 1 MLKKLNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIR-- 58
+L+ +NKH D E+ + I+ L F N + LV E + NL +R
Sbjct: 103 LLELMNKH-----DTEMKYY-------IVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNT 149
Query: 59 -LHGRVPEQTARKFLQQLGAGLEILNSHH--IIHRDLKPENILLSGLDDDVMLKIADFGL 115
G V RKF QQ+ L L + IIH DLKPENILL +KI DFG
Sbjct: 150 NFRG-VSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSA-IKIVDFGS 207
Query: 116 SCTLYPGNYAEKVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
SC L G + S Y +PEVL YD +DMWS+G IL E+ G P FSG N V
Sbjct: 208 SCQL--GQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEV 264
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 88/168 (52%), Gaps = 9/168 (5%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH-GRVPEQTARKFLQQ 74
E + + +HPNIIRL + +V E+ G+L S++R H + L+
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG 155
Query: 75 LGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLY---PGNYAEKVCGS 131
+ +G++ L+ +HRDL NIL ++ +++ K++DFGLS L Y +
Sbjct: 156 IASGMKYLSDMGFVHRDLAARNIL---INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 132 PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
P+ + +PE + ++++ D+WS G +L+E+++ G P+ +N +I
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 260
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 86/179 (48%), Gaps = 22/179 (12%)
Query: 1 MLKKLNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIR-- 58
+L+ +NKH D E+ + I+ L F N + LV E + NL +R
Sbjct: 103 LLELMNKH-----DTEMKYY-------IVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNT 149
Query: 59 -LHGRVPEQTARKFLQQLGAGLEILNSHH--IIHRDLKPENILLSGLDDDVMLKIADFGL 115
G V RKF QQ+ L L + IIH DLKPENILL +KI DFG
Sbjct: 150 NFRG-VSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCN-PKRXAIKIVDFGS 207
Query: 116 SCTLYPGNYAEKVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
SC L G + S Y +PEVL YD +DMWS+G IL E+ G P FSG N V
Sbjct: 208 SCQL--GQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEV 264
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 84/167 (50%), Gaps = 9/167 (5%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH-GRVPEQTARKFLQQ 74
E + ++HP +++L+ + I LV EF G LS Y+R G +T
Sbjct: 53 EAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLD 112
Query: 75 LGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPL- 133
+ G+ L +IHRDL N L+ ++ ++K++DFG++ + Y G+
Sbjct: 113 VCEGMAYLEEACVIHRDLAARNCLVG---ENQVIKVSDFGMTRFVLDDQYTSST-GTKFP 168
Query: 134 --YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
+ +PEV F RY K D+WS G +++E+ + G P+ R+N +++
Sbjct: 169 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV 215
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 87/168 (51%), Gaps = 9/168 (5%)
Query: 15 CELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH--GRVPEQTARKFL 72
E N + ++ H +++L A + I+++ EF A G+L +++ + P F
Sbjct: 232 AEANVMKTLQHDKLVKLH-AVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFS 290
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGS- 131
Q+ G+ + + IHRDL+ NIL+S ++ KIADFGL+ + Y +
Sbjct: 291 AQIAEGMAFIEQRNYIHRDLRAANILVSA---SLVCKIADFGLARVIEDNEYTAREGAKF 347
Query: 132 PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
P+ + APE + F + K D+WS G +L E++ G P+ G +N ++I
Sbjct: 348 PIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI 395
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 86/179 (48%), Gaps = 22/179 (12%)
Query: 1 MLKKLNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIR-- 58
+L+ +NKH D E+ + I+ L F N + LV E + NL +R
Sbjct: 84 LLELMNKH-----DTEMKYY-------IVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNT 130
Query: 59 -LHGRVPEQTARKFLQQLGAGLEILNSHH--IIHRDLKPENILLSGLDDDVMLKIADFGL 115
G V RKF QQ+ L L + IIH DLKPENILL +KI DFG
Sbjct: 131 NFRG-VSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSA-IKIVDFGS 188
Query: 116 SCTLYPGNYAEKVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
SC L G + S Y +PEVL YD +DMWS+G IL E+ G P FSG N V
Sbjct: 189 SCQL--GQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEV 245
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 88/168 (52%), Gaps = 9/168 (5%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH-GRVPEQTARKFLQQ 74
E + + +HPNIIRL + +V E+ G+L S++R H + L+
Sbjct: 84 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG 143
Query: 75 LGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLY---PGNYAEKVCGS 131
+ +G++ L+ +HRDL NIL ++ +++ K++DFGLS L Y +
Sbjct: 144 IASGMKYLSDMGYVHRDLAARNIL---INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 200
Query: 132 PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
P+ + +PE + ++++ D+WS G +L+E+++ G P+ +N +I
Sbjct: 201 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 248
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 99/212 (46%), Gaps = 25/212 (11%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL--- 72
E + + HPN+++L E +++ EF GNL Y+R R E A L
Sbjct: 61 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMA 119
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSP 132
Q+ + +E L + IHRDL N L+ ++ ++K+ADFGLS L G+ G+
Sbjct: 120 TQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLS-RLMTGDTYTAPAGAK 175
Query: 133 L---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIVPALHPD---- 184
+ APE L + ++ K D+W+ G +L+E+ G P+ G + Q + L D
Sbjct: 176 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRME 234
Query: 185 ----CVDMCLKLLSA----NTVDRLSFNEFYH 208
C + +L+ A N DR SF E +
Sbjct: 235 RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 266
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 26/215 (12%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL--- 72
E + + HPN+++L E +++ EF GNL Y+R R E A L
Sbjct: 60 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMA 118
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSP 132
Q+ + +E L + IHRDL N L+ ++ ++K+ADFGLS L G+ G+
Sbjct: 119 TQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLS-RLMTGDTYTAPAGAK 174
Query: 133 L---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIVPALHPD---- 184
+ APE L + ++ K D+W+ G +L+E+ G P+ G + Q + L D
Sbjct: 175 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRME 233
Query: 185 ----CVDMCLKLLSA----NTVDRLSFNEFYHHRF 211
C + +L+ A N DR SF E H F
Sbjct: 234 RPEGCPEKVYELMRACWQWNPSDRPSFAEI-HQAF 267
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 88/168 (52%), Gaps = 9/168 (5%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH-GRVPEQTARKFLQQ 74
E + + +HPNIIRL + +V E+ G+L S++R H + L+
Sbjct: 67 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG 126
Query: 75 LGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLY---PGNYAEKVCGS 131
+ +G++ L+ +HRDL NIL ++ +++ K++DFGLS L Y +
Sbjct: 127 IASGMKYLSDMGYVHRDLAARNIL---INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 183
Query: 132 PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
P+ + +PE + ++++ D+WS G +L+E+++ G P+ +N +I
Sbjct: 184 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 231
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 88/168 (52%), Gaps = 9/168 (5%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH-GRVPEQTARKFLQQ 74
E + + +HPNIIRL + +V E+ G+L S++R H + L+
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG 155
Query: 75 LGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLY---PGNYAEKVCGS 131
+ +G++ L+ +HRDL NIL ++ +++ K++DFGLS L Y +
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNIL---INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 132 PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
P+ + +PE + ++++ D+WS G +L+E+++ G P+ +N +I
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 260
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 98/211 (46%), Gaps = 23/211 (10%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL--- 72
E + + HPN+++L E +++ EF GNL Y+R R E A L
Sbjct: 61 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMA 119
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGS- 131
Q+ + +E L + IHRDL N L+ ++ ++K+ADFGLS + Y
Sbjct: 120 TQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMTGDTYTAHAGAKF 176
Query: 132 PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIVPALHPD----- 184
P+ + APE L + ++ K D+W+ G +L+E+ G P+ G + Q + L D
Sbjct: 177 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMER 235
Query: 185 ---CVDMCLKLLSA----NTVDRLSFNEFYH 208
C + +L+ A N DR SF E +
Sbjct: 236 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 266
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 88/168 (52%), Gaps = 9/168 (5%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH-GRVPEQTARKFLQQ 74
E + + +HPNIIRL + +V E+ G+L S++R H + L+
Sbjct: 94 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG 153
Query: 75 LGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLY---PGNYAEKVCGS 131
+ +G++ L+ +HRDL NIL ++ +++ K++DFGLS L Y +
Sbjct: 154 IASGMKYLSDMGYVHRDLAARNIL---INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 210
Query: 132 PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
P+ + +PE + ++++ D+WS G +L+E+++ G P+ +N +I
Sbjct: 211 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 258
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 88/168 (52%), Gaps = 9/168 (5%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH-GRVPEQTARKFLQQ 74
E + + +HPNIIRL + +V E+ G+L S++R H + L+
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG 155
Query: 75 LGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLY---PGNYAEKVCGS 131
+ +G++ L+ +HRDL NIL ++ +++ K++DFGLS L Y +
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNIL---INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 132 PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
P+ + +PE + ++++ D+WS G +L+E+++ G P+ +N +I
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 260
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 88/168 (52%), Gaps = 9/168 (5%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH-GRVPEQTARKFLQQ 74
E + + +HPNIIRL + +V E+ G+L S++R H + L+
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG 155
Query: 75 LGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLY---PGNYAEKVCGS 131
+ +G++ L+ +HRDL NIL ++ +++ K++DFGLS L Y +
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNIL---INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 132 PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
P+ + +PE + ++++ D+WS G +L+E+++ G P+ +N +I
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 260
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 98/211 (46%), Gaps = 23/211 (10%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL--- 72
E + + HPN+++L E +++ EF GNL Y+R R E A L
Sbjct: 59 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMA 117
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGS- 131
Q+ + +E L + IHRDL N L+ ++ ++K+ADFGLS + Y
Sbjct: 118 TQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMTGDTYTAHAGAKF 174
Query: 132 PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIVPALHPD----- 184
P+ + APE L + ++ K D+W+ G +L+E+ G P+ G + Q + L D
Sbjct: 175 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMER 233
Query: 185 ---CVDMCLKLLSA----NTVDRLSFNEFYH 208
C + +L+ A N DR SF E +
Sbjct: 234 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 264
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 98/211 (46%), Gaps = 23/211 (10%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL--- 72
E + + HPN+++L E +++ EF GNL Y+R R E A L
Sbjct: 61 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMA 119
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGS- 131
Q+ + +E L + IHRDL N L+ ++ ++K+ADFGLS + Y
Sbjct: 120 TQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMTGDTYTAHAGAKF 176
Query: 132 PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIVPALHPD----- 184
P+ + APE L + ++ K D+W+ G +L+E+ G P+ G + Q + L D
Sbjct: 177 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMER 235
Query: 185 ---CVDMCLKLLSA----NTVDRLSFNEFYH 208
C + +L+ A N DR SF E +
Sbjct: 236 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 266
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 88/168 (52%), Gaps = 9/168 (5%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH-GRVPEQTARKFLQQ 74
E + + +HPNIIRL + +V E+ G+L S++R H + L+
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG 155
Query: 75 LGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLY---PGNYAEKVCGS 131
+ +G++ L+ +HRDL NIL ++ +++ K++DFGLS L Y +
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNIL---INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 132 PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
P+ + +PE + ++++ D+WS G +L+E+++ G P+ +N +I
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 260
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 99/212 (46%), Gaps = 25/212 (11%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL--- 72
E + + HPN+++L E +++ EF GNL Y+R R E A L
Sbjct: 64 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMA 122
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSP 132
Q+ + +E L + IHRDL N L+ ++ ++K+ADFGLS L G+ G+
Sbjct: 123 TQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLS-RLMTGDTXTAHAGAK 178
Query: 133 L---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIVPALHPD---- 184
+ APE L + ++ K D+W+ G +L+E+ G P+ G + Q + L D
Sbjct: 179 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRME 237
Query: 185 ----CVDMCLKLLSA----NTVDRLSFNEFYH 208
C + +L+ A N DR SF E +
Sbjct: 238 RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 269
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 92/184 (50%), Gaps = 31/184 (16%)
Query: 15 CELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRV----------- 63
E N L VNHP++I+L+ A + + L+VE+ G+L ++R +V
Sbjct: 75 SEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSR 134
Query: 64 -------PEQTAR------KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
P++ A F Q+ G++ L ++HRDL NIL++ + +KI
Sbjct: 135 NSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVA---EGRKMKI 191
Query: 111 ADFGLSCTLYPGN-YAEKVCGS-PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYP 166
+DFGLS +Y + Y ++ G P+ +MA E L Y + D+WS G +L+E++ G
Sbjct: 192 SDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGN 251
Query: 167 PFSG 170
P+ G
Sbjct: 252 PYPG 255
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 98/211 (46%), Gaps = 23/211 (10%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL--- 72
E + + HPN+++L E +++ EF GNL Y+R R E A L
Sbjct: 64 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMA 122
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGS- 131
Q+ + +E L + IHRDL N L+ ++ ++K+ADFGLS + Y
Sbjct: 123 TQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMTGDTYTAHAGAKF 179
Query: 132 PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIVPALHPD----- 184
P+ + APE L + ++ K D+W+ G +L+E+ G P+ G + Q + L D
Sbjct: 180 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMER 238
Query: 185 ---CVDMCLKLLSA----NTVDRLSFNEFYH 208
C + +L+ A N DR SF E +
Sbjct: 239 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 269
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 98/211 (46%), Gaps = 23/211 (10%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL--- 72
E + + HPN+++L E +++ EF GNL Y+R R E A L
Sbjct: 64 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMA 122
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGS- 131
Q+ + +E L + IHRDL N L+ ++ ++K+ADFGLS + Y
Sbjct: 123 TQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMTGDTYTAHAGAKF 179
Query: 132 PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIVPALHPD----- 184
P+ + APE L + ++ K D+W+ G +L+E+ G P+ G + Q + L D
Sbjct: 180 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMER 238
Query: 185 ---CVDMCLKLLSA----NTVDRLSFNEFYH 208
C + +L+ A N DR SF E +
Sbjct: 239 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 269
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 98/211 (46%), Gaps = 23/211 (10%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL--- 72
E + + HPN+++L E +++ EF GNL Y+R R E A L
Sbjct: 59 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMA 117
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGS- 131
Q+ + +E L + IHRDL N L+ ++ ++K+ADFGLS + Y
Sbjct: 118 TQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMTGDTYTAHAGAKF 174
Query: 132 PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIVPALHPD----- 184
P+ + APE L + ++ K D+W+ G +L+E+ G P+ G + Q + L D
Sbjct: 175 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMER 233
Query: 185 ---CVDMCLKLLSA----NTVDRLSFNEFYH 208
C + +L+ A N DR SF E +
Sbjct: 234 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 264
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 98/211 (46%), Gaps = 23/211 (10%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL--- 72
E + + HPN+++L E +++ EF GNL Y+R R E A L
Sbjct: 63 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMA 121
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGS- 131
Q+ + +E L + IHRDL N L+ ++ ++K+ADFGLS + Y
Sbjct: 122 TQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMTGDTYTAHAGAKF 178
Query: 132 PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIVPALHPD----- 184
P+ + APE L + ++ K D+W+ G +L+E+ G P+ G + Q + L D
Sbjct: 179 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMER 237
Query: 185 ---CVDMCLKLLSA----NTVDRLSFNEFYH 208
C + +L+ A N DR SF E +
Sbjct: 238 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 268
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 84/167 (50%), Gaps = 9/167 (5%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH-GRVPEQTARKFLQQ 74
E + ++HP +++L+ + I LV EF G LS Y+R G +T
Sbjct: 50 EAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLD 109
Query: 75 LGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPL- 133
+ G+ L +IHRDL N L+ ++ ++K++DFG++ + Y G+
Sbjct: 110 VCEGMAYLEEACVIHRDLAARNCLVG---ENQVIKVSDFGMTRFVLDDQYTSST-GTKFP 165
Query: 134 --YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
+ +PEV F RY K D+WS G +++E+ + G P+ R+N +++
Sbjct: 166 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV 212
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 98/211 (46%), Gaps = 23/211 (10%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL--- 72
E + + HPN+++L E +++ EF GNL Y+R R E A L
Sbjct: 72 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMA 130
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGS- 131
Q+ + +E L + IHRDL N L+ ++ ++K+ADFGLS + Y
Sbjct: 131 TQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMTGDTYTAHAGAKF 187
Query: 132 PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIVPALHPD----- 184
P+ + APE L + ++ K D+W+ G +L+E+ G P+ G + Q + L D
Sbjct: 188 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMER 246
Query: 185 ---CVDMCLKLLSA----NTVDRLSFNEFYH 208
C + +L+ A N DR SF E +
Sbjct: 247 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 277
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 84/167 (50%), Gaps = 9/167 (5%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH-GRVPEQTARKFLQQ 74
E + ++HP +++L+ + I LV EF G LS Y+R G +T
Sbjct: 72 EAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLD 131
Query: 75 LGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPL- 133
+ G+ L +IHRDL N L+ ++ ++K++DFG++ + Y G+
Sbjct: 132 VCEGMAYLEEACVIHRDLAARNCLVG---ENQVIKVSDFGMTRFVLDDQYTSST-GTKFP 187
Query: 134 --YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
+ +PEV F RY K D+WS G +++E+ + G P+ R+N +++
Sbjct: 188 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV 234
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 84/167 (50%), Gaps = 9/167 (5%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH-GRVPEQTARKFLQQ 74
E + ++HP +++L+ + I LV EF G LS Y+R G +T
Sbjct: 52 EAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLD 111
Query: 75 LGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPL- 133
+ G+ L +IHRDL N L+ ++ ++K++DFG++ + Y G+
Sbjct: 112 VCEGMAYLEEACVIHRDLAARNCLVG---ENQVIKVSDFGMTRFVLDDQYTSST-GTKFP 167
Query: 134 --YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
+ +PEV F RY K D+WS G +++E+ + G P+ R+N +++
Sbjct: 168 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV 214
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 84/167 (50%), Gaps = 9/167 (5%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH-GRVPEQTARKFLQQ 74
E + ++HP +++L+ + I LV EF G LS Y+R G +T
Sbjct: 55 EAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLD 114
Query: 75 LGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPL- 133
+ G+ L +IHRDL N L+ ++ ++K++DFG++ + Y G+
Sbjct: 115 VCEGMAYLEEACVIHRDLAARNCLVG---ENQVIKVSDFGMTRFVLDDQYTSST-GTKFP 170
Query: 134 --YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
+ +PEV F RY K D+WS G +++E+ + G P+ R+N +++
Sbjct: 171 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV 217
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 93/178 (52%), Gaps = 12/178 (6%)
Query: 15 CELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH-GRVPEQTARKFLQ 73
E + + +HPN+I L + ++ EF G+L S++R + G+ L+
Sbjct: 83 SEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLR 142
Query: 74 QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPG----NYAEKVC 129
+ AG++ L + +HRDL NIL ++ +++ K++DFGLS L Y +
Sbjct: 143 GIAAGMKYLADMNYVHRDLAARNIL---VNSNLVCKVSDFGLSRFLEDDTSDPTYTSALG 199
Query: 130 GS-PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIVPALHPD 184
G P+ + APE +Q++++ D+WS G +++E+++ G P+ N Q ++ A+ D
Sbjct: 200 GKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTN-QDVINAIEQD 256
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 109/244 (44%), Gaps = 38/244 (15%)
Query: 1 MLKKLNKHLK-SCLDCELNFLSSVNHP-NIIRLFDA-FQAENCIFLVVEFCAGGNLSSYI 57
MLK+ H + L EL L + H N++ L A + + ++ EFC GNLS+Y+
Sbjct: 55 MLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYL 114
Query: 58 RL-------HGRVPEQTARKFLQ---------QLGAGLEILNSHHIIHRDLKPENILLSG 101
R + PE + FL Q+ G+E L S IHRDL NILLS
Sbjct: 115 RSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS- 173
Query: 102 LDDDVMLKIADFGLSCTLYPG-NYAEKVCGS-PL-YMAPEVLQFQRYDEKVDMWSVGAIL 158
+ ++KI DFGL+ +Y +Y K PL +MAPE + + Y + D+WS G +L
Sbjct: 174 --EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 231
Query: 159 FELLN-GYPPFSG-----------RNNVQLIVPA-LHPDCVDMCLKLLSANTVDRLSFNE 205
+E+ + G P+ G + ++ P P+ L R +F+E
Sbjct: 232 WEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSE 291
Query: 206 FYHH 209
H
Sbjct: 292 LVEH 295
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 88/169 (52%), Gaps = 11/169 (6%)
Query: 15 CELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQ- 73
E N + + H ++RL+ A + I+++ E+ G+L +++ + + T K L
Sbjct: 63 AEANLMKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGI-KLTINKLLDM 120
Query: 74 --QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY-AEKVCG 130
Q+ G+ + + IHRDL+ NIL+S D + KIADFGL+ + Y A +
Sbjct: 121 AAQIAEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIEDNEYTAREGAK 177
Query: 131 SPL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
P+ + APE + + + K D+WS G +L E++ G P+ G N ++I
Sbjct: 178 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 226
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 84/167 (50%), Gaps = 11/167 (6%)
Query: 20 LSSVNHPNIIRLFD-AFQAENCIFLVVEFCAGGNLSSYIRLHGRVPE-QTARKFLQQLGA 77
+ +HPN++ L ++E +V+ + G+L ++IR P + F Q+
Sbjct: 84 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 143
Query: 78 GLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY--AEKVCGSPL-- 133
G++ L S +HRDL N +L D+ +K+ADFGL+ +Y G+ L
Sbjct: 144 GMKYLASKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPV 200
Query: 134 -YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIV 178
+MA E LQ Q++ K D+WS G +L+EL+ G PP+ N + V
Sbjct: 201 KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 247
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 88/169 (52%), Gaps = 11/169 (6%)
Query: 15 CELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQ- 73
E N + + H ++RL+ A + I+++ E+ G+L +++ + + T K L
Sbjct: 52 AEANLMKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGI-KLTINKLLDM 109
Query: 74 --QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY-AEKVCG 130
Q+ G+ + + IHRDL+ NIL+S D + KIADFGL+ + Y A +
Sbjct: 110 AAQIAEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIEDNEYTAREGAK 166
Query: 131 SPL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
P+ + APE + + + K D+WS G +L E++ G P+ G N ++I
Sbjct: 167 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 215
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 88/169 (52%), Gaps = 11/169 (6%)
Query: 15 CELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQ- 73
E N + + H ++RL+ A + I+++ E+ G+L +++ + + T K L
Sbjct: 62 AEANLMKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGI-KLTINKLLDM 119
Query: 74 --QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY-AEKVCG 130
Q+ G+ + + IHRDL+ NIL+S D + KIADFGL+ + Y A +
Sbjct: 120 AAQIAEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIEDNEYTAREGAK 176
Query: 131 SPL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
P+ + APE + + + K D+WS G +L E++ G P+ G N ++I
Sbjct: 177 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 225
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 77.4 bits (189), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 96/193 (49%), Gaps = 26/193 (13%)
Query: 1 MLKKLNKHLK-SCLDCELNFLSSVNHP-NIIRLFDA-FQAENCIFLVVEFCAGGNLSSYI 57
MLK+ H + L EL L + H N++ L A + + ++ EFC GNLS+Y+
Sbjct: 55 MLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYL 114
Query: 58 RL-------HGRVPEQTARKFLQ---------QLGAGLEILNSHHIIHRDLKPENILLSG 101
R + PE + FL Q+ G+E L S IHRDL NILLS
Sbjct: 115 RSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS- 173
Query: 102 LDDDVMLKIADFGLSCTLYPG-NYAEKVCGS-PL-YMAPEVLQFQRYDEKVDMWSVGAIL 158
+ ++KI DFGL+ +Y +Y K PL +MAPE + + Y + D+WS G +L
Sbjct: 174 --EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 231
Query: 159 FELLN-GYPPFSG 170
+E+ + G P+ G
Sbjct: 232 WEIFSLGASPYPG 244
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 77.4 bits (189), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 88/169 (52%), Gaps = 11/169 (6%)
Query: 15 CELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQ- 73
E N + + H ++RL+ A + I+++ E+ G+L +++ + + T K L
Sbjct: 57 AEANLMKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGI-KLTINKLLDM 114
Query: 74 --QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY-AEKVCG 130
Q+ G+ + + IHRDL+ NIL+S D + KIADFGL+ + Y A +
Sbjct: 115 AAQIAEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIEDNEYTAREGAK 171
Query: 131 SPL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
P+ + APE + + + K D+WS G +L E++ G P+ G N ++I
Sbjct: 172 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 220
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 79/158 (50%), Gaps = 7/158 (4%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPE-QTARKFLQQ 74
E++ L + H NI+ L D E + LV E+ +L Y+ G + + FL Q
Sbjct: 50 EVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMHNVKLFLFQ 108
Query: 75 LGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLS-CTLYPGNYAEKVCGSPL 133
L GL + ++HRDLKP+N+L++ + LK+ADFGL+ P + +
Sbjct: 109 LLRGLAYCHRQKVLHRDLKPQNLLINERGE---LKLADFGLARAKSIPTKTYDNEVVTLW 165
Query: 134 YMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSG 170
Y P++ L Y ++DMW VG I +E+ G P F G
Sbjct: 166 YRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPG 203
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 96/192 (50%), Gaps = 25/192 (13%)
Query: 1 MLKKLNKHLK-SCLDCELNFLSSVNHP-NIIRLFDA-FQAENCIFLVVEFCAGGNLSSYI 57
MLK+ H + L EL L + H N++ L A + + ++VEFC GNLS+Y+
Sbjct: 65 MLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 124
Query: 58 R------LHGRVPEQTARKFLQ---------QLGAGLEILNSHHIIHRDLKPENILLSGL 102
R + + PE + FL Q+ G+E L S IHRDL NILLS
Sbjct: 125 RSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS-- 182
Query: 103 DDDVMLKIADFGLSCTLY--PGNYAEKVCGSPL-YMAPEVLQFQRYDEKVDMWSVGAILF 159
+ ++KI DFGL+ + P + PL +MAPE + + Y + D+WS G +L+
Sbjct: 183 -EKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLW 241
Query: 160 ELLN-GYPPFSG 170
E+ + G P+ G
Sbjct: 242 EIFSLGASPYPG 253
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 82/160 (51%), Gaps = 10/160 (6%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSY-IRLHGRVPEQTARKFLQQ 74
E + +++P I+RL QAE + LV+E GG L + + +P + L Q
Sbjct: 60 EAQIMHQLDNPYIVRLIGVCQAE-ALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQ 118
Query: 75 LGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN--YAEKVCGS- 131
+ G++ L + +HRDL N+LL + KI+DFGLS L + Y + G
Sbjct: 119 VSMGMKYLEEKNFVHRDLAARNVLLV---NRHYAKISDFGLSKALGADDSYYTARSAGKW 175
Query: 132 PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFS 169
PL + APE + F+++ + D+WS G ++E L+ G P+
Sbjct: 176 PLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYK 215
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 88/169 (52%), Gaps = 11/169 (6%)
Query: 15 CELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQ- 73
E N + + H ++RL+ A + I+++ E+ G+L +++ + + T K L
Sbjct: 67 AEANLMKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGI-KLTINKLLDM 124
Query: 74 --QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY-AEKVCG 130
Q+ G+ + + IHRDL+ NIL+S D + KIADFGL+ + Y A +
Sbjct: 125 AAQIAEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIEDNEYTAREGAK 181
Query: 131 SPL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
P+ + APE + + + K D+WS G +L E++ G P+ G N ++I
Sbjct: 182 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 230
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 88/168 (52%), Gaps = 9/168 (5%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH-GRVPEQTARKFLQQ 74
E + + +HPNIIRL + +V E+ G+L S++R H + L+
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG 155
Query: 75 LGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLY---PGNYAEKVCGS 131
+ +G++ L+ +HRDL NIL ++ +++ K++DFGL+ L Y +
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNIL---INSNLVCKVSDFGLARVLEDDPEAAYTTRGGKI 212
Query: 132 PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
P+ + +PE + ++++ D+WS G +L+E+++ G P+ +N +I
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 260
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 110/240 (45%), Gaps = 34/240 (14%)
Query: 1 MLKKLNKHLK-SCLDCELNFLSSVNHP-NIIRLFDA-FQAENCIFLVVEFCAGGNLSSYI 57
MLK+ H + L EL L + H N++ L A + + ++VEFC GNLS+Y+
Sbjct: 64 MLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 123
Query: 58 RLHGR--VPEQTARK-FLQ---------QLGAGLEILNSHHIIHRDLKPENILLSGLDDD 105
R VP + K FL Q+ G+E L S IHRDL NILLS +
Sbjct: 124 RSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLS---EK 180
Query: 106 VMLKIADFGLSCTLYPG-NYAEKVCGS-PL-YMAPEVLQFQRYDEKVDMWSVGAILFELL 162
++KI DFGL+ +Y +Y K PL +MAPE + + Y + D+WS G +L+E+
Sbjct: 181 NVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 240
Query: 163 N-GYPPFSG-----------RNNVQLIVPA-LHPDCVDMCLKLLSANTVDRLSFNEFYHH 209
+ G P+ G + ++ P P+ L R +F+E H
Sbjct: 241 SLGASPYPGVKIDEEFXRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 300
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 88/184 (47%), Gaps = 31/184 (16%)
Query: 15 CELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRV----------- 63
E N L VNHP++I+L+ A + + L+VE+ G+L ++R +V
Sbjct: 75 SEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSR 134
Query: 64 -------PEQTAR------KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
P++ A F Q+ G++ L ++HRDL NIL++ + +KI
Sbjct: 135 NSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVA---EGRKMKI 191
Query: 111 ADFGLSCTLYPGNYAEKVCGSPL---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYP 166
+DFGLS +Y + K + +MA E L Y + D+WS G +L+E++ G
Sbjct: 192 SDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGN 251
Query: 167 PFSG 170
P+ G
Sbjct: 252 PYPG 255
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 90/175 (51%), Gaps = 9/175 (5%)
Query: 9 LKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTA 68
LK L E N + +++P I+R+ +AE+ + LV+E G L+ Y++ + V ++
Sbjct: 61 LKDELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNI 119
Query: 69 RKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN--YAE 126
+ + Q+ G++ L + +HRDL N+LL KI+DFGLS L Y
Sbjct: 120 IELVHQVSMGMKYLEESNFVHRDLAARNVLLV---TQHYAKISDFGLSKALRADENYYKA 176
Query: 127 KVCGS-PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIV 178
+ G P+ + APE + + ++ K D+WS G +++E + G P+ G ++
Sbjct: 177 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 231
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 90/175 (51%), Gaps = 9/175 (5%)
Query: 9 LKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTA 68
LK L E N + +++P I+R+ +AE+ + LV+E G L+ Y++ + V ++
Sbjct: 69 LKDELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNI 127
Query: 69 RKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN--YAE 126
+ + Q+ G++ L + +HRDL N+LL KI+DFGLS L Y
Sbjct: 128 IELVHQVSMGMKYLEESNFVHRDLAARNVLLV---TQHYAKISDFGLSKALRADENYYKA 184
Query: 127 KVCGS-PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIV 178
+ G P+ + APE + + ++ K D+WS G +++E + G P+ G ++
Sbjct: 185 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 239
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 90/175 (51%), Gaps = 9/175 (5%)
Query: 9 LKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTA 68
LK L E N + +++P I+R+ +AE+ + LV+E G L+ Y++ + V ++
Sbjct: 51 LKDELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNI 109
Query: 69 RKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN--YAE 126
+ + Q+ G++ L + +HRDL N+LL KI+DFGLS L Y
Sbjct: 110 IELVHQVSMGMKYLEESNFVHRDLAARNVLLV---TQHYAKISDFGLSKALRADENYYKA 166
Query: 127 KVCGS-PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIV 178
+ G P+ + APE + + ++ K D+WS G +++E + G P+ G ++
Sbjct: 167 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 221
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 87/168 (51%), Gaps = 9/168 (5%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH-GRVPEQTARKFLQQ 74
E + + +HPNIIRL + +V E G+L S++R H + L+
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRG 155
Query: 75 LGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLY---PGNYAEKVCGS 131
+ +G++ L+ +HRDL NIL ++ +++ K++DFGLS L Y +
Sbjct: 156 IASGMKYLSDMGAVHRDLAARNIL---INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 132 PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
P+ + +PE + ++++ D+WS G +L+E+++ G P+ +N +I
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 260
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 90/175 (51%), Gaps = 9/175 (5%)
Query: 9 LKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTA 68
LK L E N + +++P I+R+ +AE+ + LV+E G L+ Y++ + V ++
Sbjct: 71 LKDELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNI 129
Query: 69 RKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN--YAE 126
+ + Q+ G++ L + +HRDL N+LL KI+DFGLS L Y
Sbjct: 130 IELVHQVSMGMKYLEESNFVHRDLAARNVLLV---TQHYAKISDFGLSKALRADENYYKA 186
Query: 127 KVCGS-PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIV 178
+ G P+ + APE + + ++ K D+WS G +++E + G P+ G ++
Sbjct: 187 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 241
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 90/175 (51%), Gaps = 9/175 (5%)
Query: 9 LKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTA 68
LK L E N + +++P I+R+ +AE+ + LV+E G L+ Y++ + V ++
Sbjct: 71 LKDELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNI 129
Query: 69 RKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN--YAE 126
+ + Q+ G++ L + +HRDL N+LL KI+DFGLS L Y
Sbjct: 130 IELVHQVSMGMKYLEESNFVHRDLAARNVLLV---TQHYAKISDFGLSKALRADENYYKA 186
Query: 127 KVCGS-PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIV 178
+ G P+ + APE + + ++ K D+WS G +++E + G P+ G ++
Sbjct: 187 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 241
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 90/175 (51%), Gaps = 9/175 (5%)
Query: 9 LKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTA 68
LK L E N + +++P I+R+ +AE+ + LV+E G L+ Y++ + V ++
Sbjct: 55 LKDELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNI 113
Query: 69 RKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN--YAE 126
+ + Q+ G++ L + +HRDL N+LL KI+DFGLS L Y
Sbjct: 114 IELVHQVSMGMKYLEESNFVHRDLAARNVLLV---TQHYAKISDFGLSKALRADENYYKA 170
Query: 127 KVCGS-PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIV 178
+ G P+ + APE + + ++ K D+WS G +++E + G P+ G ++
Sbjct: 171 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 225
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 90/175 (51%), Gaps = 9/175 (5%)
Query: 9 LKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTA 68
LK L E N + +++P I+R+ +AE+ + LV+E G L+ Y++ + V ++
Sbjct: 55 LKDELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNI 113
Query: 69 RKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN--YAE 126
+ + Q+ G++ L + +HRDL N+LL KI+DFGLS L Y
Sbjct: 114 IELVHQVSMGMKYLEESNFVHRDLAARNVLLV---TQHYAKISDFGLSKALRADENXYKA 170
Query: 127 KVCGS-PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIV 178
+ G P+ + APE + + ++ K D+WS G +++E + G P+ G ++
Sbjct: 171 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 225
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 90/175 (51%), Gaps = 9/175 (5%)
Query: 9 LKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTA 68
LK L E N + +++P I+R+ +AE+ + LV+E G L+ Y++ + V ++
Sbjct: 49 LKDELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNI 107
Query: 69 RKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN--YAE 126
+ + Q+ G++ L + +HRDL N+LL KI+DFGLS L Y
Sbjct: 108 IELVHQVSMGMKYLEESNFVHRDLAARNVLLV---TQHYAKISDFGLSKALRADENYYKA 164
Query: 127 KVCGS-PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIV 178
+ G P+ + APE + + ++ K D+WS G +++E + G P+ G ++
Sbjct: 165 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 219
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 88/184 (47%), Gaps = 31/184 (16%)
Query: 15 CELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRV----------- 63
E N L VNHP++I+L+ A + + L+VE+ G+L ++R +V
Sbjct: 75 SEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSR 134
Query: 64 -------PEQTAR------KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
P++ A F Q+ G++ L ++HRDL NIL++ + +KI
Sbjct: 135 NSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVA---EGRKMKI 191
Query: 111 ADFGLSCTLYPGNYAEKVCGSPL---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYP 166
+DFGLS +Y + K + +MA E L Y + D+WS G +L+E++ G
Sbjct: 192 SDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGN 251
Query: 167 PFSG 170
P+ G
Sbjct: 252 PYPG 255
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 87/168 (51%), Gaps = 9/168 (5%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH-GRVPEQTARKFLQQ 74
E + + +HPNIIRL + +V E+ G+L S++R H + L+
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG 155
Query: 75 LGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLY---PGNYAEKVCGS 131
+ +G++ L+ +HRDL NIL ++ +++ K++DFGL L Y +
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNIL---INSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKI 212
Query: 132 PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
P+ + +PE + ++++ D+WS G +L+E+++ G P+ +N +I
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 260
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 76.6 bits (187), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 87/168 (51%), Gaps = 9/168 (5%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH-GRVPEQTARKFLQQ 74
E + + +HPNIIRL + +V E G+L S++R H + L+
Sbjct: 67 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRG 126
Query: 75 LGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLY---PGNYAEKVCGS 131
+ +G++ L+ +HRDL NIL ++ +++ K++DFGLS L Y +
Sbjct: 127 IASGMKYLSDMGYVHRDLAARNIL---INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 183
Query: 132 PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
P+ + +PE + ++++ D+WS G +L+E+++ G P+ +N +I
Sbjct: 184 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 231
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 99/211 (46%), Gaps = 23/211 (10%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL--- 72
E + + HPN+++L E +++ EF GNL Y+R R E +A L
Sbjct: 266 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVSAVVLLYMA 324
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGS- 131
Q+ + +E L + IHR+L N L+ ++ ++K+ADFGLS + Y
Sbjct: 325 TQISSAMEYLEKKNFIHRNLAARNCLVG---ENHLVKVADFGLSRLMTGDTYTAHAGAKF 381
Query: 132 PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIVPALHPD----- 184
P+ + APE L + ++ K D+W+ G +L+E+ G P+ G + Q + L D
Sbjct: 382 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMER 440
Query: 185 ---CVDMCLKLLSA----NTVDRLSFNEFYH 208
C + +L+ A N DR SF E +
Sbjct: 441 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 471
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 87/168 (51%), Gaps = 9/168 (5%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH-GRVPEQTARKFLQQ 74
E + + +HPNIIRL + +V E G+L S++R H + L+
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRG 155
Query: 75 LGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLY---PGNYAEKVCGS 131
+ +G++ L+ +HRDL NIL ++ +++ K++DFGLS L Y +
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNIL---INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 132 PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
P+ + +PE + ++++ D+WS G +L+E+++ G P+ +N +I
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 260
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 90/175 (51%), Gaps = 9/175 (5%)
Query: 9 LKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTA 68
LK L E N + +++P I+R+ +AE+ + LV+E G L+ Y++ + V ++
Sbjct: 414 LKDELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNI 472
Query: 69 RKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN--YAE 126
+ + Q+ G++ L + +HRDL N+LL KI+DFGLS L Y
Sbjct: 473 IELVHQVSMGMKYLEESNFVHRDLAARNVLLV---TQHYAKISDFGLSKALRADENYYKA 529
Query: 127 KVCGS-PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIV 178
+ G P+ + APE + + ++ K D+WS G +++E + G P+ G ++
Sbjct: 530 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 584
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 90/175 (51%), Gaps = 9/175 (5%)
Query: 9 LKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTA 68
LK L E N + +++P I+R+ +AE+ + LV+E G L+ Y++ + V ++
Sbjct: 413 LKDELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNI 471
Query: 69 RKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN--YAE 126
+ + Q+ G++ L + +HRDL N+LL KI+DFGLS L Y
Sbjct: 472 IELVHQVSMGMKYLEESNFVHRDLAARNVLLV---TQHYAKISDFGLSKALRADENYYKA 528
Query: 127 KVCGS-PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIV 178
+ G P+ + APE + + ++ K D+WS G +++E + G P+ G ++
Sbjct: 529 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 583
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 99/199 (49%), Gaps = 39/199 (19%)
Query: 11 SCLDCELNFLSSVNHPNIIRLFDAF-------------QAENCIFLVVEFCAGGNLSSYI 57
S + E+ L+S+NH ++R + A+ + ++ +F+ +E+C N + Y
Sbjct: 47 STILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCE--NRTLYD 104
Query: 58 RLHGRVPEQTARKF---LQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFG 114
+H Q ++ +Q+ L ++S IIHRDLKP NI +D+ +KI DFG
Sbjct: 105 LIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIF---IDESRNVKIGDFG 161
Query: 115 LSCTLY-------------PGNYA--EKVCGSPLYMAPEVLQFQ-RYDEKVDMWSVGAIL 158
L+ ++ PG+ G+ +Y+A EVL Y+EK+DM+S+G I
Sbjct: 162 LAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIF 221
Query: 159 FELLNGYPPFSGRNNVQLI 177
FE++ YP +G V ++
Sbjct: 222 FEMI--YPFSTGMERVNIL 238
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 91/178 (51%), Gaps = 12/178 (6%)
Query: 15 CELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH-GRVPEQTARKFLQ 73
E + + HPNIIRL + ++ EF G L S++RL+ G+ L+
Sbjct: 64 SEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLR 123
Query: 74 QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN----YAEKVC 129
+ +G+ L +HRDL NIL ++ +++ K++DFGLS L + Y +
Sbjct: 124 GIASGMRYLAEMSYVHRDLAARNIL---VNSNLVCKVSDFGLSRFLEENSSDPTYTSSLG 180
Query: 130 GS-PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIVPALHPD 184
G P+ + APE + F+++ D WS G +++E+++ G P+ +N Q ++ A+ D
Sbjct: 181 GKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSN-QDVINAIEQD 237
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 97/211 (45%), Gaps = 30/211 (14%)
Query: 2 LKKLNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHG 61
LK+ ++ + E L+ + H +I+R F + +V E+ G+L+ ++R HG
Sbjct: 56 LKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHG 115
Query: 62 RVPEQTAR---------------KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDV 106
+ A Q+ AG+ L H +HRDL N L+ +
Sbjct: 116 PDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVG---QGL 172
Query: 107 MLKIADFGLSCTLYPGNYAEKVCGSPL----YMAPEVLQFQRYDEKVDMWSVGAILFELL 162
++KI DFG+S +Y +Y +V G + +M PE + ++++ + D+WS G +L+E+
Sbjct: 173 VVKIGDFGMSRDIYSTDYY-RVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIF 231
Query: 163 N-GYPPFSGRNNVQLIVPALHPDCVDMCLKL 192
G P+ +N + I DC+ +L
Sbjct: 232 TYGKQPWYQLSNTEAI------DCITQGREL 256
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 89/168 (52%), Gaps = 9/168 (5%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH-GRVPEQTARKFLQQ 74
E + + +HPNII L + ++ E+ G+L +++R + GR L+
Sbjct: 65 EASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRG 124
Query: 75 LGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLY---PGNYAEKVCGS 131
+G+G++ L+ +HRDL NIL+ + +++ K++DFG+S L Y +
Sbjct: 125 IGSGMKYLSDMSYVHRDLAARNILV---NSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI 181
Query: 132 PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
P+ + APE + ++++ D+WS G +++E+++ G P+ +N +I
Sbjct: 182 PIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI 229
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 89/168 (52%), Gaps = 9/168 (5%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH-GRVPEQTARKFLQQ 74
E + + +HPNII L + ++ E+ G+L +++R + GR L+
Sbjct: 80 EASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRG 139
Query: 75 LGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLY---PGNYAEKVCGS 131
+G+G++ L+ +HRDL NIL+ + +++ K++DFG+S L Y +
Sbjct: 140 IGSGMKYLSDMSAVHRDLAARNILV---NSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI 196
Query: 132 PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
P+ + APE + ++++ D+WS G +++E+++ G P+ +N +I
Sbjct: 197 PIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI 244
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 97/211 (45%), Gaps = 30/211 (14%)
Query: 2 LKKLNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHG 61
LK+ ++ + E L+ + H +I+R F + +V E+ G+L+ ++R HG
Sbjct: 50 LKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHG 109
Query: 62 RVPEQTAR---------------KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDV 106
+ A Q+ AG+ L H +HRDL N L+ +
Sbjct: 110 PDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVG---QGL 166
Query: 107 MLKIADFGLSCTLYPGNYAEKVCGSPL----YMAPEVLQFQRYDEKVDMWSVGAILFELL 162
++KI DFG+S +Y +Y +V G + +M PE + ++++ + D+WS G +L+E+
Sbjct: 167 VVKIGDFGMSRDIYSTDYY-RVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIF 225
Query: 163 N-GYPPFSGRNNVQLIVPALHPDCVDMCLKL 192
G P+ +N + I DC+ +L
Sbjct: 226 TYGKQPWYQLSNTEAI------DCITQGREL 250
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 87/170 (51%), Gaps = 11/170 (6%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQ-- 73
E+ + + HPNI+ A + +V E+ + G+L + G + R+ L
Sbjct: 84 EVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMA 143
Query: 74 -QLGAGLEILNSHH--IIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY--AEKV 128
+ G+ L++ + I+HRDLK N+L+ D +K+ DFGLS L + ++
Sbjct: 144 YDVAKGMNYLHNRNPPIVHRDLKSPNLLV---DKKYTVKVCDFGLS-RLKASXFLXSKXA 199
Query: 129 CGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV 178
G+P +MAPEVL+ + +EK D++S G IL+EL P+ N Q++
Sbjct: 200 AGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVA 249
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 75/154 (48%), Gaps = 10/154 (6%)
Query: 24 NHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHG----RVPEQTARKFLQQLGAGL 79
N N+I + + F N I + E + NL I+ + +P RKF + L
Sbjct: 157 NTMNVIHMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLP--LVRKFAHSILQCL 213
Query: 80 EILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEV 139
+ L+ + IIH DLKPENILL +K+ DFG SC Y S Y APEV
Sbjct: 214 DALHKNRIIHCDLKPENILLK-QQGRSGIKVIDFGSSC--YEHQRVYTXIQSRFYRAPEV 270
Query: 140 LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNN 173
+ RY +DMWS+G IL ELL GYP G +
Sbjct: 271 ILGARYGMPIDMWSLGCILAELLTGYPLLPGEDE 304
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 89/168 (52%), Gaps = 9/168 (5%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH-GRVPEQTARKFLQQ 74
E + + +HPNII L + ++ E+ G+L +++R + GR L+
Sbjct: 59 EASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRG 118
Query: 75 LGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLY---PGNYAEKVCGS 131
+G+G++ L+ +HRDL NIL+ + +++ K++DFG+S L Y +
Sbjct: 119 IGSGMKYLSDMSYVHRDLAARNILV---NSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI 175
Query: 132 PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
P+ + APE + ++++ D+WS G +++E+++ G P+ +N +I
Sbjct: 176 PIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI 223
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 84/167 (50%), Gaps = 11/167 (6%)
Query: 20 LSSVNHPNIIRLFD-AFQAENCIFLVVEFCAGGNLSSYIRLHGRVPE-QTARKFLQQLGA 77
+ +HPN++ L ++E +V+ + G+L ++IR P + F Q+
Sbjct: 86 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 145
Query: 78 GLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY--AEKVCGSPL-- 133
G++ L S +HRDL N +L D+ +K+ADFGL+ + + G+ L
Sbjct: 146 GMKFLASKKFVHRDLAARNCML---DEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPV 202
Query: 134 -YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIV 178
+MA E LQ Q++ K D+WS G +L+EL+ G PP+ N + V
Sbjct: 203 KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 249
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 107/242 (44%), Gaps = 36/242 (14%)
Query: 1 MLKKLNKHLK-SCLDCELNFLSSVNHP-NIIRLFDA-FQAENCIFLVVEFCAGGNLSSYI 57
MLK+ H + L EL L + H N++ L A + + ++VEFC GNLS+Y+
Sbjct: 66 MLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 125
Query: 58 RLHGR-----VPEQTARKFLQ---------QLGAGLEILNSHHIIHRDLKPENILLSGLD 103
R PE + FL Q+ G+E L S IHRDL NILLS
Sbjct: 126 RSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLS--- 182
Query: 104 DDVMLKIADFGLSCTLY--PGNYAEKVCGSPL-YMAPEVLQFQRYDEKVDMWSVGAILFE 160
+ ++KI DFGL+ + P + PL +MAPE + + Y + D+WS G +L+E
Sbjct: 183 EKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 242
Query: 161 LLN-GYPPFSG-----------RNNVQLIVPA-LHPDCVDMCLKLLSANTVDRLSFNEFY 207
+ + G P+ G + ++ P P+ L R +F+E
Sbjct: 243 IFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 302
Query: 208 HH 209
H
Sbjct: 303 EH 304
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 97/211 (45%), Gaps = 30/211 (14%)
Query: 2 LKKLNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHG 61
LK+ ++ + E L+ + H +I+R F + +V E+ G+L+ ++R HG
Sbjct: 79 LKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHG 138
Query: 62 RVPEQTAR---------------KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDV 106
+ A Q+ AG+ L H +HRDL N L+ +
Sbjct: 139 PDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVG---QGL 195
Query: 107 MLKIADFGLSCTLYPGNYAEKVCGSPL----YMAPEVLQFQRYDEKVDMWSVGAILFELL 162
++KI DFG+S +Y +Y +V G + +M PE + ++++ + D+WS G +L+E+
Sbjct: 196 VVKIGDFGMSRDIYSTDYY-RVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIF 254
Query: 163 N-GYPPFSGRNNVQLIVPALHPDCVDMCLKL 192
G P+ +N + I DC+ +L
Sbjct: 255 TYGKQPWYQLSNTEAI------DCITQGREL 279
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 108/244 (44%), Gaps = 38/244 (15%)
Query: 1 MLKKLNKHLK-SCLDCELNFLSSVNHP-NIIRLFDA-FQAENCIFLVVEFCAGGNLSSYI 57
MLK+ H + L EL L + H N++ L A + + ++VEFC GNLS+Y+
Sbjct: 55 MLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 114
Query: 58 RL-------HGRVPEQTARKFLQ---------QLGAGLEILNSHHIIHRDLKPENILLSG 101
R + PE + FL Q+ G+E L S IHRDL NILLS
Sbjct: 115 RSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS- 173
Query: 102 LDDDVMLKIADFGLSCTLY--PGNYAEKVCGSPL-YMAPEVLQFQRYDEKVDMWSVGAIL 158
+ ++KI DFGL+ + P + PL +MAPE + + Y + D+WS G +L
Sbjct: 174 --EKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 231
Query: 159 FELLN-GYPPFSG-----------RNNVQLIVPA-LHPDCVDMCLKLLSANTVDRLSFNE 205
+E+ + G P+ G + ++ P P+ L R +F+E
Sbjct: 232 WEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSE 291
Query: 206 FYHH 209
H
Sbjct: 292 LVEH 295
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 75/154 (48%), Gaps = 10/154 (6%)
Query: 24 NHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHG----RVPEQTARKFLQQLGAGL 79
N N+I + + F N I + E + NL I+ + +P RKF + L
Sbjct: 157 NTMNVIHMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLP--LVRKFAHSILQCL 213
Query: 80 EILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEV 139
+ L+ + IIH DLKPENILL +K+ DFG SC Y S Y APEV
Sbjct: 214 DALHKNRIIHCDLKPENILLK-QQGRSGIKVIDFGSSC--YEHQRVYTXIQSRFYRAPEV 270
Query: 140 LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNN 173
+ RY +DMWS+G IL ELL GYP G +
Sbjct: 271 ILGARYGMPIDMWSLGCILAELLTGYPLLPGEDE 304
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 97/189 (51%), Gaps = 22/189 (11%)
Query: 1 MLKKLNKHLK-SCLDCELNFLSSVNHP-NIIRLFDA-FQAENCIFLVVEFCAGGNLSSYI 57
MLK+ H + L EL L + H N++ L A + + ++VEFC GNLS+Y+
Sbjct: 64 MLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 123
Query: 58 RLHGR--VPEQTARK-FLQ---------QLGAGLEILNSHHIIHRDLKPENILLSGLDDD 105
R VP + K FL Q+ G+E L S IHRDL NILLS +
Sbjct: 124 RSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLS---EK 180
Query: 106 VMLKIADFGLSCTLYPG-NYAEKVCGS-PL-YMAPEVLQFQRYDEKVDMWSVGAILFELL 162
++KI DFGL+ +Y +Y K PL +MAPE + + Y + D+WS G +L+E+
Sbjct: 181 NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 240
Query: 163 N-GYPPFSG 170
+ G P+ G
Sbjct: 241 SLGASPYPG 249
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 91/189 (48%), Gaps = 9/189 (4%)
Query: 24 NHPNIIRLFDAFQAENCIFLVVEF-CAGGNLSSYIRLHGRVPEQTARKFLQQLGAGLEIL 82
HP +IRL D F+ + LV+E +L YI G + E +R F Q+ A ++
Sbjct: 96 GHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHC 155
Query: 83 NSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVLQF 142
+S ++HRD+K ENIL+ K+ DFG L+ Y + G+ +Y PE +
Sbjct: 156 HSRGVVHRDIKDENILIDLRRG--CAKLIDFGSGALLHDEPYTD-FDGTRVYSPPEWISR 212
Query: 143 QRYDE-KVDMWSVGAILFELLNGYPPFSGRNNV---QLIVPA-LHPDCVDMCLKLLSANT 197
+Y +WS+G +L++++ G PF + +L PA + PDC + + L+
Sbjct: 213 HQYHALPATVWSLGILLYDMVCGDIPFERDQEILEAELHFPAHVSPDCCALIRRCLAPKP 272
Query: 198 VDRLSFNEF 206
R S E
Sbjct: 273 SSRPSLEEI 281
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 75/154 (48%), Gaps = 10/154 (6%)
Query: 24 NHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHG----RVPEQTARKFLQQLGAGL 79
N N+I + + F N I + E + NL I+ + +P RKF + L
Sbjct: 157 NTMNVIHMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLP--LVRKFAHSILQCL 213
Query: 80 EILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEV 139
+ L+ + IIH DLKPENILL +K+ DFG SC Y S Y APEV
Sbjct: 214 DALHKNRIIHCDLKPENILLK-QQGRSGIKVIDFGSSC--YEHQRVYXXIQSRFYRAPEV 270
Query: 140 LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNN 173
+ RY +DMWS+G IL ELL GYP G +
Sbjct: 271 ILGARYGMPIDMWSLGCILAELLTGYPLLPGEDE 304
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 95/193 (49%), Gaps = 26/193 (13%)
Query: 1 MLKKLNKHLK-SCLDCELNFLSSVNHP-NIIRLFDA-FQAENCIFLVVEFCAGGNLSSYI 57
MLK+ H + L EL L + H N++ L A + + ++VEFC GNLS+Y+
Sbjct: 64 MLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 123
Query: 58 RL-------HGRVPEQTARKFLQ---------QLGAGLEILNSHHIIHRDLKPENILLSG 101
R + PE + FL Q+ G+E L S IHRDL NILLS
Sbjct: 124 RSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS- 182
Query: 102 LDDDVMLKIADFGLSCTLY--PGNYAEKVCGSPL-YMAPEVLQFQRYDEKVDMWSVGAIL 158
+ ++KI DFGL+ + P + PL +MAPE + + Y + D+WS G +L
Sbjct: 183 --EKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 240
Query: 159 FELLN-GYPPFSG 170
+E+ + G P+ G
Sbjct: 241 WEIFSLGASPYPG 253
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 95/183 (51%), Gaps = 20/183 (10%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAENCI------FLVVEFCAG 50
+KKL++ +S + EL L + H N+I L D F + + +LV+ F
Sbjct: 54 IKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQT 113
Query: 51 GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
+L + L + E+ + + Q+ GL+ ++S ++HRDLKP N+ +++D LKI
Sbjct: 114 -DLQKIMGL--KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNL---AVNEDCELKI 167
Query: 111 ADFGLSCTLYPGNYAEKVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
DFGL+ + + Y APEV L + Y++ VD+WSVG I+ E+L G F
Sbjct: 168 LDFGLA--RHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFK 225
Query: 170 GRN 172
G++
Sbjct: 226 GKD 228
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 81/164 (49%), Gaps = 19/164 (11%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIR-LHGRVPEQTARKFLQQ 74
E+ + + HPN+++ + + + E+ GG L I+ + + P F +
Sbjct: 57 EVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKD 116
Query: 75 LGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEK------- 127
+ +G+ L+S +IIHRDL N L+ ++ + +ADFGL+ + +
Sbjct: 117 IASGMAYLHSMNIIHRDLNSHNCLVR---ENKNVVVADFGLARLMVDEKTQPEGLRSLKK 173
Query: 128 --------VCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLN 163
V G+P +MAPE++ + YDEKVD++S G +L E++
Sbjct: 174 PDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIG 217
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 83/167 (49%), Gaps = 10/167 (5%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL--- 72
E + + HPN+++L E ++V E+ GNL Y+R R E TA L
Sbjct: 78 EAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNR-EEVTAVVLLYMA 136
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGS- 131
Q+ + +E L + IHRDL N L+ ++ ++K+ADFGLS + Y
Sbjct: 137 TQISSAMEYLEKKNFIHRDLAARNCLVG---ENHVVKVADFGLSRLMTGDTYTAHAGAKF 193
Query: 132 PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQL 176
P+ + APE L + + K D+W+ G +L+E+ G P+ G + Q+
Sbjct: 194 PIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 240
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 91/185 (49%), Gaps = 26/185 (14%)
Query: 42 FLVVEFCAGGNLSSYIRLHGRV-------PEQTARKFLQQLGAGLEILNSHHIIHRDLKP 94
+++ F G+L +++ L R+ P QT +F+ + G+E L+S + IHRDL
Sbjct: 107 MVILPFMKHGDLHAFL-LASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAA 165
Query: 95 ENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPL---YMAPEVLQFQRYDEKVDM 151
N +L+ +D+ + +ADFGLS +Y G+Y + C S L ++A E L Y D+
Sbjct: 166 RNCMLA---EDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDV 222
Query: 152 WSVGAILFELLN-GYPPFSGRNNVQLI-----------VPALHPDCVDMCLKLLSANTVD 199
W+ G ++E++ G P++G N ++ P + D+ + SA+
Sbjct: 223 WAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQ 282
Query: 200 RLSFN 204
R SF
Sbjct: 283 RPSFT 287
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 98/211 (46%), Gaps = 23/211 (10%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL--- 72
E + + HPN+++L E +++ EF GNL Y+R R E A L
Sbjct: 263 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMA 321
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGS- 131
Q+ + +E L + IHR+L N L+ ++ ++K+ADFGLS + Y
Sbjct: 322 TQISSAMEYLEKKNFIHRNLAARNCLVG---ENHLVKVADFGLSRLMTGDTYTAHAGAKF 378
Query: 132 PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIVPALHPD----- 184
P+ + APE L + ++ K D+W+ G +L+E+ G P+ G + Q + L D
Sbjct: 379 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMER 437
Query: 185 ---CVDMCLKLLSA----NTVDRLSFNEFYH 208
C + +L+ A N DR SF E +
Sbjct: 438 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 468
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 98/211 (46%), Gaps = 23/211 (10%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL--- 72
E + + HPN+++L E +++ EF GNL Y+R R E A L
Sbjct: 305 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMA 363
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGS- 131
Q+ + +E L + IHR+L N L+ ++ ++K+ADFGLS + Y
Sbjct: 364 TQISSAMEYLEKKNFIHRNLAARNCLVG---ENHLVKVADFGLSRLMTGDTYTAHAGAKF 420
Query: 132 PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIVPALHPD----- 184
P+ + APE L + ++ K D+W+ G +L+E+ G P+ G + Q + L D
Sbjct: 421 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMER 479
Query: 185 ---CVDMCLKLLSA----NTVDRLSFNEFYH 208
C + +L+ A N DR SF E +
Sbjct: 480 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 510
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 85/165 (51%), Gaps = 9/165 (5%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIR-LHGRVPEQTARKFLQQ 74
E + +++H +++L+ + IF++ E+ A G L +Y+R + R Q + +
Sbjct: 49 EAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKD 108
Query: 75 LGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPL- 133
+ +E L S +HRDL N L ++D ++K++DFGLS + Y V GS
Sbjct: 109 VCEAMEYLESKQFLHRDLAARNCL---VNDQGVVKVSDFGLSRYVLDDEYTSSV-GSKFP 164
Query: 134 --YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQ 175
+ PEVL + ++ K D+W+ G +++E+ + G P+ N +
Sbjct: 165 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE 209
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 88/169 (52%), Gaps = 11/169 (6%)
Query: 15 CELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQ- 73
E N + + H ++RL+ A + I+++ E+ G+L +++ + + T K L
Sbjct: 53 AEANLMKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGI-KLTINKLLDM 110
Query: 74 --QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY-AEKVCG 130
Q+ G+ + + IHR+L+ NIL+S D + KIADFGL+ + Y A +
Sbjct: 111 AAQIAEGMAFIEERNYIHRNLRAANILVS---DTLSCKIADFGLARLIEDNEYTAREGAK 167
Query: 131 SPL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
P+ + APE + + + K D+WS G +L E++ G P+ G N ++I
Sbjct: 168 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 216
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 85/165 (51%), Gaps = 9/165 (5%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIR-LHGRVPEQTARKFLQQ 74
E + +++H +++L+ + IF++ E+ A G L +Y+R + R Q + +
Sbjct: 53 EAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKD 112
Query: 75 LGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPL- 133
+ +E L S +HRDL N L ++D ++K++DFGLS + Y V GS
Sbjct: 113 VCEAMEYLESKQFLHRDLAARNCL---VNDQGVVKVSDFGLSRYVLDDEYTSSV-GSKFP 168
Query: 134 --YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQ 175
+ PEVL + ++ K D+W+ G +++E+ + G P+ N +
Sbjct: 169 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE 213
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 85/165 (51%), Gaps = 9/165 (5%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIR-LHGRVPEQTARKFLQQ 74
E + +++H +++L+ + IF++ E+ A G L +Y+R + R Q + +
Sbjct: 54 EAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKD 113
Query: 75 LGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPL- 133
+ +E L S +HRDL N L ++D ++K++DFGLS + Y V GS
Sbjct: 114 VCEAMEYLESKQFLHRDLAARNCL---VNDQGVVKVSDFGLSRYVLDDEYTSSV-GSKFP 169
Query: 134 --YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQ 175
+ PEVL + ++ K D+W+ G +++E+ + G P+ N +
Sbjct: 170 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE 214
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 81/163 (49%), Gaps = 5/163 (3%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E++ L + H NII L + + L+ E+ A +L Y+ + V + + FL QL
Sbjct: 83 EVSLLKELQHRNIIELKSVIHHNHRLHLIFEY-AENDLKKYMDKNPDVSMRVIKSFLYQL 141
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLD--DDVMLKIADFGLSCTL-YPGNYAEKVCGSP 132
G+ +S +HRDLKP+N+LLS D + +LKI DFGL+ P +
Sbjct: 142 INGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITL 201
Query: 133 LYMAPEVLQFQR-YDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
Y PE+L R Y VD+WS+ I E+L P F G + +
Sbjct: 202 WYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEI 244
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 92/178 (51%), Gaps = 12/178 (6%)
Query: 15 CELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH-GRVPEQTARKFLQ 73
E + + +HPN+I L + ++ EF G+L S++R + G+ L+
Sbjct: 57 SEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLR 116
Query: 74 QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPG----NYAEKVC 129
+ AG++ L + +HR L NIL ++ +++ K++DFGLS L Y +
Sbjct: 117 GIAAGMKYLADMNYVHRALAARNIL---VNSNLVCKVSDFGLSRFLEDDTSDPTYTSALG 173
Query: 130 GS-PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIVPALHPD 184
G P+ + APE +Q++++ D+WS G +++E+++ G P+ N Q ++ A+ D
Sbjct: 174 GKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTN-QDVINAIEQD 230
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 87/170 (51%), Gaps = 11/170 (6%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQ-- 73
E+ + + HPNI+ A + +V E+ + G+L + G + R+ L
Sbjct: 84 EVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMA 143
Query: 74 -QLGAGLEILNSHH--IIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY--AEKV 128
+ G+ L++ + I+HR+LK N+L+ D +K+ DFGLS L + ++
Sbjct: 144 YDVAKGMNYLHNRNPPIVHRNLKSPNLLV---DKKYTVKVCDFGLS-RLKASTFLSSKSA 199
Query: 129 CGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV 178
G+P +MAPEVL+ + +EK D++S G IL+EL P+ N Q++
Sbjct: 200 AGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVA 249
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 86/167 (51%), Gaps = 15/167 (8%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENC-----IFLVVEFCAGGNLSSYIRLHGRVPEQTARK 70
E+ L H NII + D +A ++LV G +L ++ +
Sbjct: 91 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLM-GADLYKLLKTQHLSNDHICY- 148
Query: 71 FLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN----YAE 126
FL Q+ GL+ ++S +++HRDLKP N+LL+ D LKI DFGL+ P + +
Sbjct: 149 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTGFLT 205
Query: 127 KVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRN 172
+ + Y APE+ L + Y + +D+WSVG IL E+L+ P F G++
Sbjct: 206 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 252
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 85/165 (51%), Gaps = 9/165 (5%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIR-LHGRVPEQTARKFLQQ 74
E + +++H +++L+ + IF++ E+ A G L +Y+R + R Q + +
Sbjct: 60 EAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKD 119
Query: 75 LGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPL- 133
+ +E L S +HRDL N L ++D ++K++DFGLS + Y V GS
Sbjct: 120 VCEAMEYLESKQFLHRDLAARNCL---VNDQGVVKVSDFGLSRYVLDDEYTSSV-GSKFP 175
Query: 134 --YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQ 175
+ PEVL + ++ K D+W+ G +++E+ + G P+ N +
Sbjct: 176 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE 220
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 85/169 (50%), Gaps = 10/169 (5%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSY-IRLHGRVPEQTARKFLQQ 74
E + +++P I+RL QAE + LV+E GG L + + +P + L Q
Sbjct: 386 EAQIMHQLDNPYIVRLIGVCQAE-ALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQ 444
Query: 75 LGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN--YAEKVCGS- 131
+ G++ L + +HR+L N+LL + KI+DFGLS L + Y + G
Sbjct: 445 VSMGMKYLEEKNFVHRNLAARNVLLV---NRHYAKISDFGLSKALGADDSYYTARSAGKW 501
Query: 132 PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIV 178
PL + APE + F+++ + D+WS G ++E L+ G P+ +++
Sbjct: 502 PLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMA 550
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 90/179 (50%), Gaps = 14/179 (7%)
Query: 15 CELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH-GRVPEQTARKFLQ 73
E + + HPNIIRL + ++ EF G L S++RL+ G+ L+
Sbjct: 66 SEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLR 125
Query: 74 QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPL 133
+ +G+ L +HRDL NIL ++ +++ K++DFGLS L N ++ S L
Sbjct: 126 GIASGMRYLAEMSYVHRDLAARNIL---VNSNLVCKVSDFGLSRFLEE-NSSDPTETSSL 181
Query: 134 -------YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIVPALHPD 184
+ APE + F+++ D WS G +++E+++ G P+ +N Q ++ A+ D
Sbjct: 182 GGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSN-QDVINAIEQD 239
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 107/244 (43%), Gaps = 38/244 (15%)
Query: 1 MLKKLNKHLK-SCLDCELNFLSSVNHP-NIIRLFDA-FQAENCIFLVVEFCAGGNLSSYI 57
MLK+ H + L EL L + H N++ L A + + ++ EFC GNLS+Y+
Sbjct: 55 MLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYL 114
Query: 58 RL-------HGRVPEQTARKFLQ---------QLGAGLEILNSHHIIHRDLKPENILLSG 101
R + PE + FL Q+ G+E L S IHRDL NILLS
Sbjct: 115 RSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS- 173
Query: 102 LDDDVMLKIADFGLSCTLY--PGNYAEKVCGSPL-YMAPEVLQFQRYDEKVDMWSVGAIL 158
+ ++KI DFGL+ + P + PL +MAPE + + Y + D+WS G +L
Sbjct: 174 --EKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 231
Query: 159 FELLN-GYPPFSG-----------RNNVQLIVPA-LHPDCVDMCLKLLSANTVDRLSFNE 205
+E+ + G P+ G + ++ P P+ L R +F+E
Sbjct: 232 WEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSE 291
Query: 206 FYHH 209
H
Sbjct: 292 LVEH 295
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 74.7 bits (182), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 85/160 (53%), Gaps = 10/160 (6%)
Query: 10 KSCLDCELNFLSSVNHPNIIRLFDAF--QAENCIFLVVEFCAGGNLSSYIRLHGRVPEQT 67
+S E++ L ++ H +II+ Q E + LV+E+ G+L Y+ H Q
Sbjct: 60 RSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQL 119
Query: 68 ARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEK 127
F QQ+ G+ L+S H IHR+L N+L LD+D ++KI DFGL+ + G+ +
Sbjct: 120 LL-FAQQICEGMAYLHSQHYIHRNLAARNVL---LDNDRLVKIGDFGLAKAVPEGHEYYR 175
Query: 128 V---CGSPL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN 163
V SP+ + APE L+ ++ D+WS G L+ELL
Sbjct: 176 VREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 87/169 (51%), Gaps = 11/169 (6%)
Query: 15 CELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQ- 73
E N + + H ++RL+ A + I+++ E+ G+L +++ + + T K L
Sbjct: 57 AEANLMKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGI-KLTINKLLDM 114
Query: 74 --QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY-AEKVCG 130
Q+ G+ + + IHRDL+ NIL+S D + KIADFGL+ + A +
Sbjct: 115 AAQIAEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIEDAEXTAREGAK 171
Query: 131 SPL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
P+ + APE + + + K D+WS G +L E++ G P+ G N ++I
Sbjct: 172 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 220
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 85/165 (51%), Gaps = 9/165 (5%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIR-LHGRVPEQTARKFLQQ 74
E + +++H +++L+ + IF++ E+ A G L +Y+R + R Q + +
Sbjct: 69 EAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKD 128
Query: 75 LGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPL- 133
+ +E L S +HRDL N L ++D ++K++DFGLS + Y V GS
Sbjct: 129 VCEAMEYLESKQFLHRDLAARNCL---VNDQGVVKVSDFGLSRYVLDDEYTSSV-GSKFP 184
Query: 134 --YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQ 175
+ PEVL + ++ K D+W+ G +++E+ + G P+ N +
Sbjct: 185 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE 229
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 87/168 (51%), Gaps = 9/168 (5%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH-GRVPEQTARKFLQQ 74
E + + +HPNII L + +V E+ G+L ++++ + G+ L+
Sbjct: 73 EASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRG 132
Query: 75 LGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLY---PGNYAEKVCGS 131
+ AG++ L+ +HRDL NIL+ + +++ K++DFGLS L Y +
Sbjct: 133 ISAGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 189
Query: 132 PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
P+ + APE + F+++ D+WS G +++E+++ G P+ N +I
Sbjct: 190 PIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVI 237
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 86/170 (50%), Gaps = 13/170 (7%)
Query: 15 CELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQ- 73
E N + + H ++RL+ A + I+++ E+ G+L +++ + + T K L
Sbjct: 59 AEANLMKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGI-KLTINKLLDM 116
Query: 74 --QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGS 131
Q+ G+ + + IHRDL+ NIL+S D + KIADFGL+ L N G+
Sbjct: 117 AAQIAEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLA-RLIEDNEXTAREGA 172
Query: 132 PL---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
+ APE + + + K D+WS G +L E++ G P+ G N ++I
Sbjct: 173 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 222
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 86/170 (50%), Gaps = 13/170 (7%)
Query: 15 CELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQ- 73
E N + + H ++RL+ A + I+++ E+ G+L +++ + + T K L
Sbjct: 58 AEANLMKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGI-KLTINKLLDM 115
Query: 74 --QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGS 131
Q+ G+ + + IHRDL+ NIL+S D + KIADFGL+ L N G+
Sbjct: 116 AAQIAEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLA-RLIEDNEXTAREGA 171
Query: 132 PL---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
+ APE + + + K D+WS G +L E++ G P+ G N ++I
Sbjct: 172 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 221
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 86/170 (50%), Gaps = 13/170 (7%)
Query: 15 CELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQ- 73
E N + + H ++RL+ A + I+++ E+ G+L +++ + + T K L
Sbjct: 57 AEANLMKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGI-KLTINKLLDM 114
Query: 74 --QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGS 131
Q+ G+ + + IHRDL+ NIL+S D + KIADFGL+ L N G+
Sbjct: 115 AAQIAEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLA-RLIEDNEXTAREGA 170
Query: 132 PL---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
+ APE + + + K D+WS G +L E++ G P+ G N ++I
Sbjct: 171 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 220
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 94/183 (51%), Gaps = 20/183 (10%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAENCI------FLVVEFCAG 50
+KKL++ +S + EL L + H N+I L D F + + +LV+ F
Sbjct: 72 IKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQT 131
Query: 51 GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
+L + + E+ + + Q+ GL+ ++S ++HRDLKP N+ +++D LKI
Sbjct: 132 -DLQKIMGME--FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNL---AVNEDCELKI 185
Query: 111 ADFGLSCTLYPGNYAEKVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFS 169
DFGL+ + + Y APEV L + Y++ VD+WSVG I+ E+L G F
Sbjct: 186 LDFGLA--RHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFK 243
Query: 170 GRN 172
G++
Sbjct: 244 GKD 246
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 92/183 (50%), Gaps = 14/183 (7%)
Query: 15 CELNFLSSVNHPNIIRLFDAF-QAENCIFLVVEFCAGGNLSSYIRLHGR--VPEQTARKF 71
E + ++ + H N+++L + + +++V E+ A G+L Y+R GR + KF
Sbjct: 63 AEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKF 122
Query: 72 LQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGS 131
+ +E L ++ +HRDL N+L+S +D + K++DFGL+ K+
Sbjct: 123 SLDVCEAMEYLEGNNFVHRDLAARNVLVS---EDNVAKVSDFGLTKEASSTQDTGKL--- 176
Query: 132 PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN----GYPPFSGRNNVQLIVPALHPDCV 186
P+ + APE L+ +++ K D+WS G +L+E+ + YP ++ V + D
Sbjct: 177 PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAP 236
Query: 187 DMC 189
D C
Sbjct: 237 DGC 239
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 92/183 (50%), Gaps = 14/183 (7%)
Query: 15 CELNFLSSVNHPNIIRLFDAF-QAENCIFLVVEFCAGGNLSSYIRLHGR--VPEQTARKF 71
E + ++ + H N+++L + + +++V E+ A G+L Y+R GR + KF
Sbjct: 48 AEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKF 107
Query: 72 LQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGS 131
+ +E L ++ +HRDL N+L+S +D + K++DFGL+ K+
Sbjct: 108 SLDVCEAMEYLEGNNFVHRDLAARNVLVS---EDNVAKVSDFGLTKEASSTQDTGKL--- 161
Query: 132 PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN----GYPPFSGRNNVQLIVPALHPDCV 186
P+ + APE L+ +++ K D+WS G +L+E+ + YP ++ V + D
Sbjct: 162 PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAP 221
Query: 187 DMC 189
D C
Sbjct: 222 DGC 224
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 86/170 (50%), Gaps = 13/170 (7%)
Query: 15 CELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQ- 73
E N + + H ++RL+ A + I+++ E+ G+L +++ + + T K L
Sbjct: 57 AEANLMKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGI-KLTINKLLDM 114
Query: 74 --QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGS 131
Q+ G+ + + IHRDL+ NIL+S D + KIADFGL+ L N G+
Sbjct: 115 AAQIAEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLA-RLIEDNEXTAREGA 170
Query: 132 PL---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
+ APE + + + K D+WS G +L E++ G P+ G N ++I
Sbjct: 171 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 220
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 86/170 (50%), Gaps = 13/170 (7%)
Query: 15 CELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQ- 73
E N + + H ++RL+ A + I+++ E+ G+L +++ + + T K L
Sbjct: 66 AEANLMKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGI-KLTINKLLDM 123
Query: 74 --QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGS 131
Q+ G+ + + IHRDL+ NIL+S D + KIADFGL+ L N G+
Sbjct: 124 AAQIAEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLA-RLIEDNEXTAREGA 179
Query: 132 PL---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
+ APE + + + K D+WS G +L E++ G P+ G N ++I
Sbjct: 180 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 229
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 86/170 (50%), Gaps = 13/170 (7%)
Query: 15 CELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQ- 73
E N + + H ++RL+ A + I+++ E+ G+L +++ + + T K L
Sbjct: 63 AEANLMKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGI-KLTINKLLDM 120
Query: 74 --QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGS 131
Q+ G+ + + IHRDL+ NIL+S D + KIADFGL+ L N G+
Sbjct: 121 AAQIAEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLA-RLIEDNEXTAREGA 176
Query: 132 PL---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
+ APE + + + K D+WS G +L E++ G P+ G N ++I
Sbjct: 177 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 226
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 86/170 (50%), Gaps = 13/170 (7%)
Query: 15 CELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQ- 73
E N + + H ++RL+ A + I+++ E+ G+L +++ + + T K L
Sbjct: 65 AEANLMKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGI-KLTINKLLDM 122
Query: 74 --QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGS 131
Q+ G+ + + IHRDL+ NIL+S D + KIADFGL+ L N G+
Sbjct: 123 AAQIAEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLA-RLIEDNEXTAREGA 178
Query: 132 PL---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
+ APE + + + K D+WS G +L E++ G P+ G N ++I
Sbjct: 179 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 228
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 73.9 bits (180), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 83/166 (50%), Gaps = 19/166 (11%)
Query: 27 NIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRL--------HGRVPEQTARKFLQ---QL 75
+++RL +V+E A G+L SY+R GR P T ++ +Q ++
Sbjct: 80 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR-PPPTLQEMIQMAAEI 138
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPL-- 133
G+ LN+ +HRDL N +++ D +KI DFG++ +Y +Y K L
Sbjct: 139 ADGMAYLNAKKFVHRDLAARNCMVA---HDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 195
Query: 134 -YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
+MAPE L+ + DMWS G +L+E+ + P+ G +N Q++
Sbjct: 196 RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL 241
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 73.9 bits (180), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 92/183 (50%), Gaps = 14/183 (7%)
Query: 15 CELNFLSSVNHPNIIRLFDAF-QAENCIFLVVEFCAGGNLSSYIRLHGR--VPEQTARKF 71
E + ++ + H N+++L + + +++V E+ A G+L Y+R GR + KF
Sbjct: 235 AEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKF 294
Query: 72 LQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGS 131
+ +E L ++ +HRDL N+L+S +D + K++DFGL+ K+
Sbjct: 295 SLDVCEAMEYLEGNNFVHRDLAARNVLVS---EDNVAKVSDFGLTKEASSTQDTGKL--- 348
Query: 132 PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN----GYPPFSGRNNVQLIVPALHPDCV 186
P+ + APE L+ +++ K D+WS G +L+E+ + YP ++ V + D
Sbjct: 349 PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAP 408
Query: 187 DMC 189
D C
Sbjct: 409 DGC 411
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 73.9 bits (180), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 83/166 (50%), Gaps = 19/166 (11%)
Query: 27 NIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRL--------HGRVPEQTARKFLQ---QL 75
+++RL +V+E A G+L SY+R GR P T ++ +Q ++
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR-PPPTLQEMIQMAAEI 139
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPL-- 133
G+ LN+ +HRDL N +++ D +KI DFG++ +Y +Y K L
Sbjct: 140 ADGMAYLNAKKFVHRDLAARNCMVA---HDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 196
Query: 134 -YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
+MAPE L+ + DMWS G +L+E+ + P+ G +N Q++
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL 242
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 85/160 (53%), Gaps = 10/160 (6%)
Query: 10 KSCLDCELNFLSSVNHPNIIRLFDAF--QAENCIFLVVEFCAGGNLSSYIRLHGRVPEQT 67
+S E++ L ++ H +II+ Q E + LV+E+ G+L Y+ H Q
Sbjct: 60 RSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQL 119
Query: 68 ARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEK 127
F QQ+ G+ L++ H IHR+L N+L LD+D ++KI DFGL+ + G+ +
Sbjct: 120 LL-FAQQICEGMAYLHAQHYIHRNLAARNVL---LDNDRLVKIGDFGLAKAVPEGHEYYR 175
Query: 128 V---CGSPL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN 163
V SP+ + APE L+ ++ D+WS G L+ELL
Sbjct: 176 VREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 89/179 (49%), Gaps = 21/179 (11%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAE------NCIFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
EL L H NII + D + +++V++ +L I + + R
Sbjct: 103 ELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVR 161
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLS---CTLYPGN--- 123
FL QL GL+ ++S +IHRDLKP N+L ++++ LKI DFG++ CT P
Sbjct: 162 YFLYQLLRGLKYMHSAQVIHRDLKPSNLL---VNENCELKIGDFGMARGLCT-SPAEHQY 217
Query: 124 YAEKVCGSPLYMAPE-VLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV---QLIV 178
+ + + Y APE +L Y + +D+WSVG I E+L F G+N V QLI+
Sbjct: 218 FMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIM 276
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 102/206 (49%), Gaps = 32/206 (15%)
Query: 1 MLKK-LNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIR- 58
MLK+ + +++ E ++ ++PNI++L + L+ E+ A G+L+ ++R
Sbjct: 84 MLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRS 143
Query: 59 ---------------LHGRV------PEQTARKF--LQQLGAGLEILNSHHIIHRDLKPE 95
RV P A + +Q+ AG+ L+ +HRDL
Sbjct: 144 MSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATR 203
Query: 96 NILLSGLDDDVMLKIADFGLSCTLYPGNY--AEKVCGSPL-YMAPEVLQFQRYDEKVDMW 152
N L+ +++++KIADFGLS +Y +Y A+ P+ +M PE + + RY + D+W
Sbjct: 204 NCLVG---ENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVW 260
Query: 153 SVGAILFELLN-GYPPFSGRNNVQLI 177
+ G +L+E+ + G P+ G + ++I
Sbjct: 261 AYGVVLWEIFSYGLQPYYGMAHEEVI 286
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 93/196 (47%), Gaps = 18/196 (9%)
Query: 16 ELNFLSSVNHPNIIRLFDAF--QAENCIFLVVEFCAGGNLSSYIRLHG---------RVP 64
E+ L + HPN+I L F A+ ++L+ ++ A +L I+ H ++P
Sbjct: 68 EIALLRELKHPNVISLQKVFLSHADRKVWLLFDY-AEHDLWHIIKFHRASKANKKPVQLP 126
Query: 65 EQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDV-MLKIADFGLS----CTL 119
+ L Q+ G+ L+++ ++HRDLKP NIL+ G + +KIAD G + L
Sbjct: 127 RGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPL 186
Query: 120 YPGNYAEKVCGSPLYMAPEVLQFQR-YDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV 178
P + V + Y APE+L R Y + +D+W++G I ELL P F R
Sbjct: 187 KPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTS 246
Query: 179 PALHPDCVDMCLKLLS 194
H D +D ++
Sbjct: 247 NPYHHDQLDRIFNVMG 262
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 85/173 (49%), Gaps = 12/173 (6%)
Query: 16 ELNFLSSVNHPNIIRL----FDAFQAENCIFL--VVEFCAGGNLS---SYIRLHGRVPEQ 66
EL + ++H NI+RL + + + ++ ++L V+++ Y R +P
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
+ ++ QL L ++S I HRD+KP+N+LL D +LK+ DFG + L G
Sbjct: 123 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNV 180
Query: 127 KVCGSPLYMAPE-VLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV 178
S Y APE + Y +D+WS G +L ELL G P F G + V +V
Sbjct: 181 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 233
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 84/167 (50%), Gaps = 17/167 (10%)
Query: 15 CELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH--GRVPEQTARKFL 72
E N + ++ H +++L A + I+++ EF A G+L +++ + P F
Sbjct: 226 AEANVMKTLQHDKLVKLH-AVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFS 284
Query: 73 QQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSP 132
Q+ G+ + + IHRDL+ NIL+S ++ KIADFGL A P
Sbjct: 285 AQIAEGMAFIEQRNYIHRDLRAANILVSA---SLVCKIADFGL---------ARVGAKFP 332
Query: 133 L-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
+ + APE + F + K D+WS G +L E++ G P+ G +N ++I
Sbjct: 333 IKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI 379
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 65/107 (60%), Gaps = 8/107 (7%)
Query: 71 FLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN----YAE 126
FL Q+ GL+ ++S +++HRDLKP N+LL+ D LKI DFGL+ P + +
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKIXDFGLARVADPDHDHTGFLT 185
Query: 127 KVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRN 172
+ + Y APE+ L + Y + +D+WSVG IL E+L+ P F G++
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 65/107 (60%), Gaps = 8/107 (7%)
Query: 71 FLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN----YAE 126
FL Q+ GL+ ++S +++HRDLKP N+LL+ D LKI DFGL+ P + +
Sbjct: 131 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSD---LKICDFGLARVADPDHDHTGFLT 187
Query: 127 KVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRN 172
+ + Y APE+ L + Y + +D+WSVG IL E+L+ P F G++
Sbjct: 188 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 234
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 82/166 (49%), Gaps = 19/166 (11%)
Query: 27 NIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRL--------HGRVPEQTARKFLQ---QL 75
+++RL +V+E A G+L SY+R GR P T ++ +Q ++
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR-PPPTLQEMIQMAAEI 139
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPL-- 133
G+ LN+ +HRDL N +++ D +KI DFG++ +Y Y K L
Sbjct: 140 ADGMAYLNAKKFVHRDLAARNCMVA---HDFTVKIGDFGMTRDIYETAYYRKGGKGLLPV 196
Query: 134 -YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
+MAPE L+ + DMWS G +L+E+ + P+ G +N Q++
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL 242
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 89/179 (49%), Gaps = 21/179 (11%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAE------NCIFLVVEFCAGGNLSSYIRLHGRVPEQTAR 69
EL L H NII + D + +++V++ +L I + + R
Sbjct: 104 ELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVR 162
Query: 70 KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLS---CTLYPGN--- 123
FL QL GL+ ++S +IHRDLKP N+L ++++ LKI DFG++ CT P
Sbjct: 163 YFLYQLLRGLKYMHSAQVIHRDLKPSNLL---VNENCELKIGDFGMARGLCT-SPAEHQY 218
Query: 124 YAEKVCGSPLYMAPE-VLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV---QLIV 178
+ + + Y APE +L Y + +D+WSVG I E+L F G+N V QLI+
Sbjct: 219 FMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIM 277
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 85/173 (49%), Gaps = 12/173 (6%)
Query: 16 ELNFLSSVNHPNIIRL----FDAFQAENCIFL--VVEFCAGGNLS---SYIRLHGRVPEQ 66
EL + ++H NI+RL + + + ++ ++L V+++ Y R +P
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVI 122
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
+ ++ QL L ++S I HRD+KP+N+LL D +LK+ DFG + L G
Sbjct: 123 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNV 180
Query: 127 KVCGSPLYMAPE-VLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV 178
S Y APE + Y +D+WS G +L ELL G P F G + V +V
Sbjct: 181 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 233
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 65/107 (60%), Gaps = 8/107 (7%)
Query: 71 FLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN----YAE 126
FL Q+ GL+ ++S +++HRDLKP N+LL+ D LKI DFGL+ P + +
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTGFLT 185
Query: 127 KVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRN 172
+ + Y APE+ L + Y + +D+WSVG IL E+L+ P F G++
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 65/107 (60%), Gaps = 8/107 (7%)
Query: 71 FLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN----YAE 126
FL Q+ GL+ ++S +++HRDLKP N+LL+ D LKI DFGL+ P + +
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTGFLT 185
Query: 127 KVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRN 172
+ + Y APE+ L + Y + +D+WSVG IL E+L+ P F G++
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 84/165 (50%), Gaps = 9/165 (5%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIR-LHGRVPEQTARKFLQQ 74
E + +++H +++L+ + IF++ E+ A G L +Y+R + R Q + +
Sbjct: 54 EAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKD 113
Query: 75 LGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPL- 133
+ +E L S +HRDL N L ++D ++K++DFGLS + Y GS
Sbjct: 114 VCEAMEYLESKQFLHRDLAARNCL---VNDQGVVKVSDFGLSRYVLDDEYTSSR-GSKFP 169
Query: 134 --YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQ 175
+ PEVL + ++ K D+W+ G +++E+ + G P+ N +
Sbjct: 170 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE 214
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 65/107 (60%), Gaps = 8/107 (7%)
Query: 71 FLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN----YAE 126
FL Q+ GL+ ++S +++HRDLKP N+LL+ D LKI DFGL+ P + +
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTGFLT 189
Query: 127 KVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRN 172
+ + Y APE+ L + Y + +D+WSVG IL E+L+ P F G++
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 65/107 (60%), Gaps = 8/107 (7%)
Query: 71 FLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN----YAE 126
FL Q+ GL+ ++S +++HRDLKP N+LL+ D LKI DFGL+ P + +
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTGFLT 189
Query: 127 KVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRN 172
+ + Y APE+ L + Y + +D+WSVG IL E+L+ P F G++
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 87/162 (53%), Gaps = 15/162 (9%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGR---VPEQTARKFL 72
E+ +S++NHPNI++L+ N +V+EF G+L Y RL + + + +
Sbjct: 73 EVFIMSNLNHPNIVKLYGLMH--NPPRMVMEFVPCGDL--YHRLLDKAHPIKWSVKLRLM 128
Query: 73 QQLGAGLEILNSHH--IIHRDLKPENILLSGLDDD--VMLKIADFGLSCTLYPGNYAEKV 128
+ G+E + + + I+HRDL+ NI L LD++ V K+ADFGLS + +
Sbjct: 129 LDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSV--HSVSGL 186
Query: 129 CGSPLYMAPEVL--QFQRYDEKVDMWSVGAILFELLNGYPPF 168
G+ +MAPE + + + Y EK D +S IL+ +L G PF
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 68/127 (53%), Gaps = 3/127 (2%)
Query: 53 LSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIAD 112
L S+IR +P ++ QL + ++S I HRD+KP+N+L++ D+ LK+ D
Sbjct: 128 LKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDN--TLKLCD 185
Query: 113 FGLSCTLYPGNYAEKVCGSPLYMAPE-VLQFQRYDEKVDMWSVGAILFELLNGYPPFSGR 171
FG + L P + S Y APE +L Y +D+WS+G + EL+ G P FSG
Sbjct: 186 FGSAKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGE 245
Query: 172 NNVQLIV 178
++ +V
Sbjct: 246 TSIDQLV 252
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 82/172 (47%), Gaps = 26/172 (15%)
Query: 25 HPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPE-----------------QT 67
HPNII L A + ++L +E+ GNL ++R RV E Q
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLR-KSRVLETDPAFAIANSTASTLSSQQ 133
Query: 68 ARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEK 127
F + G++ L+ IHRDL NIL+ ++ + KIADFGLS Y +K
Sbjct: 134 LLHFAADVARGMDYLSQKQFIHRDLAARNILVG---ENYVAKIADFGLSRG--QEVYVKK 188
Query: 128 VCGS-PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQL 176
G P+ +MA E L + Y D+WS G +L+E+++ G P+ G +L
Sbjct: 189 TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL 240
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 82/172 (47%), Gaps = 26/172 (15%)
Query: 25 HPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPE-----------------QT 67
HPNII L A + ++L +E+ GNL ++R RV E Q
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLR-KSRVLETDPAFAIANSTASTLSSQQ 143
Query: 68 ARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEK 127
F + G++ L+ IHRDL NIL+ ++ + KIADFGLS Y +K
Sbjct: 144 LLHFAADVARGMDYLSQKQFIHRDLAARNILVG---ENYVAKIADFGLSRG--QEVYVKK 198
Query: 128 VCGS-PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQL 176
G P+ +MA E L + Y D+WS G +L+E+++ G P+ G +L
Sbjct: 199 TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL 250
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 82/165 (49%), Gaps = 19/165 (11%)
Query: 28 IIRLFDAFQAENCIFLVVEFCAGGNLSSYIRL--------HGRVPEQTARKFLQ---QLG 76
++RL +V+E A G+L SY+R GR P T ++ +Q ++
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR-PPPTLQEMIQMAAEIA 140
Query: 77 AGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPL--- 133
G+ LN+ +HR+L N +++ D +KI DFG++ +Y +Y K L
Sbjct: 141 DGMAYLNAKKFVHRNLAARNCMVA---HDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 197
Query: 134 YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
+MAPE L+ + DMWS G +L+E+ + P+ G +N Q++
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL 242
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 84/162 (51%), Gaps = 10/162 (6%)
Query: 8 HLKSCLDCELNFLSSVNHPNIIRLFDAF--QAENCIFLVVEFCAGGNLSSYIRLHGRVPE 65
L+S E+ L ++ H +I++ Q E + LV+E+ G+L Y+ H V
Sbjct: 53 QLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHC-VGL 111
Query: 66 QTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYA 125
F QQ+ G+ L++ H IHR L N+L LD+D ++KI DFGL+ + G+
Sbjct: 112 AQLLLFAQQICEGMAYLHAQHYIHRALAARNVL---LDNDRLVKIGDFGLAKAVPEGHEY 168
Query: 126 EKV---CGSPL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN 163
+V SP+ + APE L+ ++ D+WS G L+ELL
Sbjct: 169 YRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 84/162 (51%), Gaps = 10/162 (6%)
Query: 8 HLKSCLDCELNFLSSVNHPNIIRLFDAF--QAENCIFLVVEFCAGGNLSSYIRLHGRVPE 65
L+S E+ L ++ H +I++ Q E + LV+E+ G+L Y+ H V
Sbjct: 52 QLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHC-VGL 110
Query: 66 QTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYA 125
F QQ+ G+ L++ H IHR L N+L LD+D ++KI DFGL+ + G+
Sbjct: 111 AQLLLFAQQICEGMAYLHAQHYIHRALAARNVL---LDNDRLVKIGDFGLAKAVPEGHEY 167
Query: 126 EKV---CGSPL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN 163
+V SP+ + APE L+ ++ D+WS G L+ELL
Sbjct: 168 YRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 85/173 (49%), Gaps = 12/173 (6%)
Query: 16 ELNFLSSVNHPNIIRL----FDAFQAENCIFL--VVEFCAGGNLS---SYIRLHGRVPEQ 66
EL + ++H NI+RL + + + ++ ++L V+++ Y R +P
Sbjct: 64 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 123
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
+ ++ QL L ++S I HRD+KP+N+LL D +LK+ DFG + L G
Sbjct: 124 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNV 181
Query: 127 KVCGSPLYMAPE-VLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV 178
S Y APE + Y +D+WS G +L ELL G P F G + V +V
Sbjct: 182 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 234
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 85/173 (49%), Gaps = 12/173 (6%)
Query: 16 ELNFLSSVNHPNIIRL----FDAFQAENCIFL--VVEFCAGGNLS---SYIRLHGRVPEQ 66
EL + ++H NI+RL + + + ++ ++L V+++ Y R +P
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
+ ++ QL L ++S I HRD+KP+N+LL D +LK+ DFG + L G
Sbjct: 123 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNV 180
Query: 127 KVCGSPLYMAPE-VLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV 178
S Y APE + Y +D+WS G +L ELL G P F G + V +V
Sbjct: 181 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 233
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 86/162 (53%), Gaps = 14/162 (8%)
Query: 10 KSCLDCELNFLSSVNHPNIIRLF----DAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPE 65
+S E++ L ++ H +II+ DA A + LV+E+ G+L Y+ H
Sbjct: 77 RSGWKQEIDILRTLYHEHIIKYKGCCEDAGAAS--LQLVMEYVPLGSLRDYLPRHSIGLA 134
Query: 66 QTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYA 125
Q F QQ+ G+ L++ H IHRDL N+L LD+D ++KI DFGL+ + G+
Sbjct: 135 QLLL-FAQQICEGMAYLHAQHYIHRDLAARNVL---LDNDRLVKIGDFGLAKAVPEGHEX 190
Query: 126 EKV---CGSPL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN 163
+V SP+ + APE L+ ++ D+WS G L+ELL
Sbjct: 191 YRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 85/173 (49%), Gaps = 12/173 (6%)
Query: 16 ELNFLSSVNHPNIIRL----FDAFQAENCIFL--VVEFCAGGNLS---SYIRLHGRVPEQ 66
EL + ++H NI+RL + + + ++ ++L V+++ Y R +P
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
+ ++ QL L ++S I HRD+KP+N+LL D +LK+ DFG + L G
Sbjct: 123 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNV 180
Query: 127 KVCGSPLYMAPE-VLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV 178
S Y APE + Y +D+WS G +L ELL G P F G + V +V
Sbjct: 181 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 233
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 90/183 (49%), Gaps = 14/183 (7%)
Query: 15 CELNFLSSVNHPNIIRLFDAF-QAENCIFLVVEFCAGGNLSSYIRLHGR--VPEQTARKF 71
E + ++ + H N+++L + + +++V E+ A G+L Y+R GR + KF
Sbjct: 54 AEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKF 113
Query: 72 LQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGS 131
+ +E L ++ +HRDL N+L+S +D + K++DFGL+ K+
Sbjct: 114 SLDVCEAMEYLEGNNFVHRDLAARNVLVS---EDNVAKVSDFGLTKEASSTQDTGKL--- 167
Query: 132 PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN----GYPPFSGRNNVQLIVPALHPDCV 186
P+ + APE L+ + K D+WS G +L+E+ + YP ++ V + D
Sbjct: 168 PVKWTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAP 227
Query: 187 DMC 189
D C
Sbjct: 228 DGC 230
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 85/173 (49%), Gaps = 12/173 (6%)
Query: 16 ELNFLSSVNHPNIIRL----FDAFQAENCIFL--VVEFCAGGNLS---SYIRLHGRVPEQ 66
EL + ++H NI+RL + + + ++ ++L V+++ Y R +P
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
+ ++ QL L ++S I HRD+KP+N+LL D +LK+ DFG + L G
Sbjct: 123 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNV 180
Query: 127 KVCGSPLYMAPE-VLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV 178
S Y APE + Y +D+WS G +L ELL G P F G + V +V
Sbjct: 181 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 233
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 82/165 (49%), Gaps = 19/165 (11%)
Query: 28 IIRLFDAFQAENCIFLVVEFCAGGNLSSYIRL--------HGRVPEQTARKFLQ---QLG 76
++RL +V+E A G+L SY+R GR P T ++ +Q ++
Sbjct: 83 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR-PPPTLQEMIQMAAEIA 141
Query: 77 AGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPL--- 133
G+ LN+ +HR+L N +++ D +KI DFG++ +Y +Y K L
Sbjct: 142 DGMAYLNAKKFVHRNLAARNCMVA---HDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 198
Query: 134 YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
+MAPE L+ + DMWS G +L+E+ + P+ G +N Q++
Sbjct: 199 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL 243
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 85/173 (49%), Gaps = 12/173 (6%)
Query: 16 ELNFLSSVNHPNIIRL----FDAFQAENCIFL--VVEFCAGGNLS---SYIRLHGRVPEQ 66
EL + ++H NI+RL + + + ++ ++L V+++ Y R +P
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
+ ++ QL L ++S I HRD+KP+N+LL D +LK+ DFG + L G
Sbjct: 123 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNV 180
Query: 127 KVCGSPLYMAPE-VLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV 178
S Y APE + Y +D+WS G +L ELL G P F G + V +V
Sbjct: 181 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 233
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 85/173 (49%), Gaps = 12/173 (6%)
Query: 16 ELNFLSSVNHPNIIRL----FDAFQAENCIFL--VVEFCAGGNLS---SYIRLHGRVPEQ 66
EL + ++H NI+RL + + + ++ ++L V+++ Y R +P
Sbjct: 67 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 126
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
+ ++ QL L ++S I HRD+KP+N+LL D +LK+ DFG + L G
Sbjct: 127 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNV 184
Query: 127 KVCGSPLYMAPE-VLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV 178
S Y APE + Y +D+WS G +L ELL G P F G + V +V
Sbjct: 185 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 237
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 85/173 (49%), Gaps = 12/173 (6%)
Query: 16 ELNFLSSVNHPNIIRL----FDAFQAENCIFL--VVEFCAGGNLS---SYIRLHGRVPEQ 66
EL + ++H NI+RL + + + ++ ++L V+++ Y R +P
Sbjct: 82 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 141
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
+ ++ QL L ++S I HRD+KP+N+LL D +LK+ DFG + L G
Sbjct: 142 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNV 199
Query: 127 KVCGSPLYMAPE-VLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV 178
S Y APE + Y +D+WS G +L ELL G P F G + V +V
Sbjct: 200 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 252
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 85/173 (49%), Gaps = 12/173 (6%)
Query: 16 ELNFLSSVNHPNIIRL----FDAFQAENCIFL--VVEFCAGGNLS---SYIRLHGRVPEQ 66
EL + ++H NI+RL + + + ++ ++L V+++ Y R +P
Sbjct: 71 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 130
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
+ ++ QL L ++S I HRD+KP+N+LL D +LK+ DFG + L G
Sbjct: 131 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNV 188
Query: 127 KVCGSPLYMAPE-VLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV 178
S Y APE + Y +D+WS G +L ELL G P F G + V +V
Sbjct: 189 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 241
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 85/173 (49%), Gaps = 12/173 (6%)
Query: 16 ELNFLSSVNHPNIIRL----FDAFQAENCIFL--VVEFCAGGNLS---SYIRLHGRVPEQ 66
EL + ++H NI+RL + + + ++ ++L V+++ Y R +P
Sbjct: 75 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 134
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
+ ++ QL L ++S I HRD+KP+N+LL D +LK+ DFG + L G
Sbjct: 135 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNV 192
Query: 127 KVCGSPLYMAPE-VLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV 178
S Y APE + Y +D+WS G +L ELL G P F G + V +V
Sbjct: 193 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 245
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 85/173 (49%), Gaps = 12/173 (6%)
Query: 16 ELNFLSSVNHPNIIRL----FDAFQAENCIFL--VVEFCAGGNLS---SYIRLHGRVPEQ 66
EL + ++H NI+RL + + + ++ ++L V+++ Y R +P
Sbjct: 75 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 134
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
+ ++ QL L ++S I HRD+KP+N+LL D +LK+ DFG + L G
Sbjct: 135 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNV 192
Query: 127 KVCGSPLYMAPE-VLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV 178
S Y APE + Y +D+WS G +L ELL G P F G + V +V
Sbjct: 193 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 245
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 82/173 (47%), Gaps = 12/173 (6%)
Query: 16 ELNFLSSVNHPNIIRLFDAF------QAENCIFLVVEFCAGGNLSS---YIRLHGRVPEQ 66
EL + V HPN++ L F + E + LV+E+ + Y +L +P
Sbjct: 82 ELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPML 141
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
+ ++ QL L ++S I HRD+KP+N+LL +LK+ DFG + L G
Sbjct: 142 LIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSG--VLKLIDFGSAKILIAGEPNV 199
Query: 127 KVCGSPLYMAPE-VLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV 178
S Y APE + Y +D+WS G ++ EL+ G P F G + + +V
Sbjct: 200 SXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLV 252
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 65/107 (60%), Gaps = 8/107 (7%)
Query: 71 FLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN----YAE 126
FL Q+ GL+ ++S +++HRDLKP N+LL+ D LKI DFGL+ P + +
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLT 185
Query: 127 KVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRN 172
+ + Y APE+ L + Y + +D+WSVG IL E+L+ P F G++
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 85/173 (49%), Gaps = 12/173 (6%)
Query: 16 ELNFLSSVNHPNIIRL----FDAFQAENCIFL--VVEFCAGGNLS---SYIRLHGRVPEQ 66
EL + ++H NI+RL + + + ++ ++L V+++ Y R +P
Sbjct: 76 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 135
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
+ ++ QL L ++S I HRD+KP+N+LL D +LK+ DFG + L G
Sbjct: 136 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNV 193
Query: 127 KVCGSPLYMAPE-VLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV 178
S Y APE + Y +D+WS G +L ELL G P F G + V +V
Sbjct: 194 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 246
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 85/173 (49%), Gaps = 12/173 (6%)
Query: 16 ELNFLSSVNHPNIIRL----FDAFQAENCIFL--VVEFCAGGNLS---SYIRLHGRVPEQ 66
EL + ++H NI+RL + + + ++ ++L V+++ Y R +P
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
+ ++ QL L ++S I HRD+KP+N+LL D +LK+ DFG + L G
Sbjct: 123 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNV 180
Query: 127 KVCGSPLYMAPE-VLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV 178
S Y APE + Y +D+WS G +L ELL G P F G + V +V
Sbjct: 181 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 233
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 65/107 (60%), Gaps = 8/107 (7%)
Query: 71 FLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN----YAE 126
FL Q+ GL+ ++S +++HRDLKP N+LL+ D LKI DFGL+ P + +
Sbjct: 131 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLT 187
Query: 127 KVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRN 172
+ + Y APE+ L + Y + +D+WSVG IL E+L+ P F G++
Sbjct: 188 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 234
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 65/107 (60%), Gaps = 8/107 (7%)
Query: 71 FLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN----YAE 126
FL Q+ GL+ ++S +++HRDLKP N+LL+ D LKI DFGL+ P + +
Sbjct: 134 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLT 190
Query: 127 KVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRN 172
+ + Y APE+ L + Y + +D+WSVG IL E+L+ P F G++
Sbjct: 191 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 237
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 65/107 (60%), Gaps = 8/107 (7%)
Query: 71 FLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN----YAE 126
FL Q+ GL+ ++S +++HRDLKP N+LL+ D LKI DFGL+ P + +
Sbjct: 135 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLT 191
Query: 127 KVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRN 172
+ + Y APE+ L + Y + +D+WSVG IL E+L+ P F G++
Sbjct: 192 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 238
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 65/107 (60%), Gaps = 8/107 (7%)
Query: 71 FLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN----YAE 126
FL Q+ GL+ ++S +++HRDLKP N+LL+ D LKI DFGL+ P + +
Sbjct: 126 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLT 182
Query: 127 KVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRN 172
+ + Y APE+ L + Y + +D+WSVG IL E+L+ P F G++
Sbjct: 183 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 229
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 65/107 (60%), Gaps = 8/107 (7%)
Query: 71 FLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN----YAE 126
FL Q+ GL+ ++S +++HRDLKP N+LL+ D LKI DFGL+ P + +
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLT 189
Query: 127 KVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRN 172
+ + Y APE+ L + Y + +D+WSVG IL E+L+ P F G++
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 65/107 (60%), Gaps = 8/107 (7%)
Query: 71 FLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN----YAE 126
FL Q+ GL+ ++S +++HRDLKP N+LL+ D LKI DFGL+ P + +
Sbjct: 131 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLT 187
Query: 127 KVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRN 172
+ + Y APE+ L + Y + +D+WSVG IL E+L+ P F G++
Sbjct: 188 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 234
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 85/173 (49%), Gaps = 12/173 (6%)
Query: 16 ELNFLSSVNHPNIIRL----FDAFQAENCIFL--VVEFCAGGNLS---SYIRLHGRVPEQ 66
EL + ++H NI+RL + + + ++ ++L V+++ Y R +P
Sbjct: 68 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 127
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
+ ++ QL L ++S I HRD+KP+N+LL D +LK+ DFG + L G
Sbjct: 128 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNV 185
Query: 127 KVCGSPLYMAPE-VLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV 178
S Y APE + Y +D+WS G +L ELL G P F G + V +V
Sbjct: 186 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 238
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 85/173 (49%), Gaps = 12/173 (6%)
Query: 16 ELNFLSSVNHPNIIRL----FDAFQAENCIFL--VVEFCAGGNLS---SYIRLHGRVPEQ 66
EL + ++H NI+RL + + + ++ ++L V+++ Y R +P
Sbjct: 91 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 150
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
+ ++ QL L ++S I HRD+KP+N+LL D +LK+ DFG + L G
Sbjct: 151 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNV 208
Query: 127 KVCGSPLYMAPE-VLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV 178
S Y APE + Y +D+WS G +L ELL G P F G + V +V
Sbjct: 209 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 261
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 65/107 (60%), Gaps = 8/107 (7%)
Query: 71 FLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN----YAE 126
FL Q+ GL+ ++S +++HRDLKP N+LL+ D LKI DFGL+ P + +
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLT 189
Query: 127 KVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRN 172
+ + Y APE+ L + Y + +D+WSVG IL E+L+ P F G++
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 65/107 (60%), Gaps = 8/107 (7%)
Query: 71 FLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN----YAE 126
FL Q+ GL+ ++S +++HRDLKP N+LL+ D LKI DFGL+ P + +
Sbjct: 127 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLT 183
Query: 127 KVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRN 172
+ + Y APE+ L + Y + +D+WSVG IL E+L+ P F G++
Sbjct: 184 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 230
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 65/107 (60%), Gaps = 8/107 (7%)
Query: 71 FLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN----YAE 126
FL Q+ GL+ ++S +++HRDLKP N+LL+ D LKI DFGL+ P + +
Sbjct: 149 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLT 205
Query: 127 KVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRN 172
+ + Y APE+ L + Y + +D+WSVG IL E+L+ P F G++
Sbjct: 206 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 252
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 65/107 (60%), Gaps = 8/107 (7%)
Query: 71 FLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN----YAE 126
FL Q+ GL+ ++S +++HRDLKP N+LL+ D LKI DFGL+ P + +
Sbjct: 137 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLT 193
Query: 127 KVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRN 172
+ + Y APE+ L + Y + +D+WSVG IL E+L+ P F G++
Sbjct: 194 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 240
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 65/107 (60%), Gaps = 8/107 (7%)
Query: 71 FLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN----YAE 126
FL Q+ GL+ ++S +++HRDLKP N+LL+ D LKI DFGL+ P + +
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLT 185
Query: 127 KVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRN 172
+ + Y APE+ L + Y + +D+WSVG IL E+L+ P F G++
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 65/107 (60%), Gaps = 8/107 (7%)
Query: 71 FLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN----YAE 126
FL Q+ GL+ ++S +++HRDLKP N+LL+ D LKI DFGL+ P + +
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLT 189
Query: 127 KVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRN 172
+ + Y APE+ L + Y + +D+WSVG IL E+L+ P F G++
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 84/165 (50%), Gaps = 9/165 (5%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIR-LHGRVPEQTARKFLQQ 74
E + +++H +++L+ + IF++ E+ A G L +Y+R + R Q + +
Sbjct: 69 EAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKD 128
Query: 75 LGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPL- 133
+ +E L S +HRDL N L ++D ++K++DFGLS + V GS
Sbjct: 129 VCEAMEYLESKQFLHRDLAARNCL---VNDQGVVKVSDFGLSRYVLDDEETSSV-GSKFP 184
Query: 134 --YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQ 175
+ PEVL + ++ K D+W+ G +++E+ + G P+ N +
Sbjct: 185 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE 229
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 65/107 (60%), Gaps = 8/107 (7%)
Query: 71 FLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN----YAE 126
FL Q+ GL+ ++S +++HRDLKP N+LL+ D LKI DFGL+ P + +
Sbjct: 127 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLT 183
Query: 127 KVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRN 172
+ + Y APE+ L + Y + +D+WSVG IL E+L+ P F G++
Sbjct: 184 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 230
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 65/107 (60%), Gaps = 8/107 (7%)
Query: 71 FLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN----YAE 126
FL Q+ GL+ ++S +++HRDLKP N+LL+ D LKI DFGL+ P + +
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLX 189
Query: 127 KVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRN 172
+ + Y APE+ L + Y + +D+WSVG IL E+L+ P F G++
Sbjct: 190 EXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 65/107 (60%), Gaps = 8/107 (7%)
Query: 71 FLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN----YAE 126
FL Q+ GL+ ++S +++HRDLKP N+LL+ D LKI DFGL+ P + +
Sbjct: 134 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLX 190
Query: 127 KVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRN 172
+ + Y APE+ L + Y + +D+WSVG IL E+L+ P F G++
Sbjct: 191 EXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 237
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 85/173 (49%), Gaps = 12/173 (6%)
Query: 16 ELNFLSSVNHPNIIRL----FDAFQAENCIFL--VVEFCAGGNLS---SYIRLHGRVPEQ 66
EL + ++H NI+RL + + + ++ ++L V+++ Y R +P
Sbjct: 97 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 156
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
+ ++ QL L ++S I HRD+KP+N+LL D +LK+ DFG + L G
Sbjct: 157 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNV 214
Query: 127 KVCGSPLYMAPE-VLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV 178
S Y APE + Y +D+WS G +L ELL G P F G + V +V
Sbjct: 215 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 267
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 85/173 (49%), Gaps = 12/173 (6%)
Query: 16 ELNFLSSVNHPNIIRL----FDAFQAENCIFL--VVEFCAGGNLS---SYIRLHGRVPEQ 66
EL + ++H NI+RL + + + ++ ++L V+++ Y R +P
Sbjct: 101 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 160
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
+ ++ QL L ++S I HRD+KP+N+LL D +LK+ DFG + L G
Sbjct: 161 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNV 218
Query: 127 KVCGSPLYMAPE-VLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV 178
S Y APE + Y +D+WS G +L ELL G P F G + V +V
Sbjct: 219 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 271
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 85/173 (49%), Gaps = 12/173 (6%)
Query: 16 ELNFLSSVNHPNIIRL----FDAFQAENCIFL--VVEFCAGGNLS---SYIRLHGRVPEQ 66
EL + ++H NI+RL + + + ++ ++L V+++ Y R +P
Sbjct: 97 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 156
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
+ ++ QL L ++S I HRD+KP+N+LL D +LK+ DFG + L G
Sbjct: 157 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNV 214
Query: 127 KVCGSPLYMAPE-VLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV 178
S Y APE + Y +D+WS G +L ELL G P F G + V +V
Sbjct: 215 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 267
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 86/162 (53%), Gaps = 15/162 (9%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGR---VPEQTARKFL 72
E+ +S++NHPNI++L+ N +V+EF G+L Y RL + + + +
Sbjct: 73 EVFIMSNLNHPNIVKLYGLMH--NPPRMVMEFVPCGDL--YHRLLDKAHPIKWSVKLRLM 128
Query: 73 QQLGAGLEILNSHH--IIHRDLKPENILLSGLDDD--VMLKIADFGLSCTLYPGNYAEKV 128
+ G+E + + + I+HRDL+ NI L LD++ V K+ADFG S + +
Sbjct: 129 LDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSV--HSVSGL 186
Query: 129 CGSPLYMAPEVL--QFQRYDEKVDMWSVGAILFELLNGYPPF 168
G+ +MAPE + + + Y EK D +S IL+ +L G PF
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 85/173 (49%), Gaps = 12/173 (6%)
Query: 16 ELNFLSSVNHPNIIRL----FDAFQAENCIFL--VVEFCAGGNLS---SYIRLHGRVPEQ 66
EL + ++H NI+RL + + + ++ ++L V+++ Y R +P
Sbjct: 142 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 201
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
+ ++ QL L ++S I HRD+KP+N+LL D +LK+ DFG + L G
Sbjct: 202 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNV 259
Query: 127 KVCGSPLYMAPE-VLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV 178
S Y APE + Y +D+WS G +L ELL G P F G + V +V
Sbjct: 260 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 312
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 85/173 (49%), Gaps = 12/173 (6%)
Query: 16 ELNFLSSVNHPNIIRL----FDAFQAENCIFL--VVEFCAGGNLS---SYIRLHGRVPEQ 66
EL + ++H NI+RL + + + ++ ++L V+++ Y R +P
Sbjct: 99 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 158
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
+ ++ QL L ++S I HRD+KP+N+LL D +LK+ DFG + L G
Sbjct: 159 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNV 216
Query: 127 KVCGSPLYMAPE-VLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIV 178
S Y APE + Y +D+WS G +L ELL G P F G + V +V
Sbjct: 217 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 269
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 70.9 bits (172), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 82/164 (50%), Gaps = 11/164 (6%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDA--FQAENCIFLVVEFCAGGNLSSYIRLHG-RV 63
+HL+ + E+ L S+ H NI++ + L++EF G+L Y++ H R+
Sbjct: 56 EHLRD-FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERI 114
Query: 64 PEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN 123
++ Q+ G+E L + IHRDL NIL ++++ +KI DFGL+ L
Sbjct: 115 DHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL---VENENRVKIGDFGLTKVLPQDK 171
Query: 124 YAEKV---CGSPLYM-APEVLQFQRYDEKVDMWSVGAILFELLN 163
KV SP++ APE L ++ D+WS G +L+EL
Sbjct: 172 EXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 70.5 bits (171), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 82/164 (50%), Gaps = 11/164 (6%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDA--FQAENCIFLVVEFCAGGNLSSYIRLHG-RV 63
+HL+ + E+ L S+ H NI++ + L++E+ G+L Y++ H R+
Sbjct: 56 EHLRD-FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERI 114
Query: 64 PEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN 123
++ Q+ G+E L + IHRDL NIL ++++ +KI DFGL+ L
Sbjct: 115 DHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL---VENENRVKIGDFGLTKVLPQDK 171
Query: 124 YAEKV---CGSPL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN 163
KV SP+ + APE L ++ D+WS G +L+EL
Sbjct: 172 EXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 70.5 bits (171), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 82/172 (47%), Gaps = 26/172 (15%)
Query: 25 HPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPE-----------------QT 67
HPNII L A + ++L +E+ GNL ++R RV E Q
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLR-KSRVLETDPAFAIANSTASTLSSQQ 140
Query: 68 ARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEK 127
F + G++ L+ IHR+L NIL+ ++ + KIADFGLS Y +K
Sbjct: 141 LLHFAADVARGMDYLSQKQFIHRNLAARNILVG---ENYVAKIADFGLSRG--QEVYVKK 195
Query: 128 VCGS-PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQL 176
G P+ +MA E L + Y D+WS G +L+E+++ G P+ G +L
Sbjct: 196 TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL 247
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 70.5 bits (171), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 85/186 (45%), Gaps = 42/186 (22%)
Query: 14 DCELNFLSSVNHPNI-IRLFDAFQAENCI------------FLVVEFCAGGNLSSYI--- 57
D L+ S ++ P++ IR D F +N + ++ ++ C NL ++
Sbjct: 96 DWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRR 155
Query: 58 -----RLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIAD 112
R HG Q+ +E L+S ++HRDLKP NI + +DD ++K+ D
Sbjct: 156 CSLEDREHG-----VCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFT-MDD--VVKVGD 207
Query: 113 FGLSCTLYPGNYAEKV-------------CGSPLYMAPEVLQFQRYDEKVDMWSVGAILF 159
FGL + + V G+ LYM+PE + Y KVD++S+G ILF
Sbjct: 208 FGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILF 267
Query: 160 ELLNGY 165
ELL +
Sbjct: 268 ELLYSF 273
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 95/199 (47%), Gaps = 39/199 (19%)
Query: 11 SCLDCELNFLSSVNHPNIIRLFDAF-------------QAENCIFLVVEFCAGGNLSSYI 57
S + E+ L+S+NH ++R + A+ + ++ +F+ E+C N + Y
Sbjct: 47 STILSEVXLLASLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCE--NRTLYD 104
Query: 58 RLHGRVPEQTARKF---LQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFG 114
+H Q ++ +Q+ L ++S IIHR+LKP NI +D+ +KI DFG
Sbjct: 105 LIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRNLKPXNIF---IDESRNVKIGDFG 161
Query: 115 LSCTLY-------------PGNYAE--KVCGSPLYMAPEVLQFQ-RYDEKVDMWSVGAIL 158
L+ ++ PG+ G+ Y+A EVL Y+EK+D +S+G I
Sbjct: 162 LAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIF 221
Query: 159 FELLNGYPPFSGRNNVQLI 177
FE + YP +G V ++
Sbjct: 222 FEXI--YPFSTGXERVNIL 238
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 70.1 bits (170), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 86/162 (53%), Gaps = 15/162 (9%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGR---VPEQTARKFL 72
E+ +S++NHPNI++L+ N +V+EF G+L Y RL + + + +
Sbjct: 73 EVFIMSNLNHPNIVKLYGLMH--NPPRMVMEFVPCGDL--YHRLLDKAHPIKWSVKLRLM 128
Query: 73 QQLGAGLEILNSHH--IIHRDLKPENILLSGLDDD--VMLKIADFGLSCTLYPGNYAEKV 128
+ G+E + + + I+HRDL+ NI L LD++ V K+ADF LS + +
Sbjct: 129 LDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSV--HSVSGL 186
Query: 129 CGSPLYMAPEVL--QFQRYDEKVDMWSVGAILFELLNGYPPF 168
G+ +MAPE + + + Y EK D +S IL+ +L G PF
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 70.1 bits (170), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 82/169 (48%), Gaps = 18/169 (10%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCI---FLVVEFCAGGNLSSYIR----LHGRVPEQTA 68
E L +NH NI++LF A + E L++EFC G+L + + +G +PE
Sbjct: 57 EFEVLKKLNHKNIVKLF-AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYG-LPESEF 114
Query: 69 RKFLQQLGAGLEILNSHHIIHRDLKPENIL-LSGLDDDVMLKIADFGLSCTLYPGNYAEK 127
L+ + G+ L + I+HR++KP NI+ + G D + K+ DFG + L
Sbjct: 115 LIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVS 174
Query: 128 VCGSPLYMAPEVLQF--------QRYDEKVDMWSVGAILFELLNGYPPF 168
+ G+ Y+ P++ + ++Y VD+WS+G + G PF
Sbjct: 175 LYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 70.1 bits (170), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 64/107 (59%), Gaps = 8/107 (7%)
Query: 71 FLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYP----GNYAE 126
FL Q+ GL+ ++S +++HRDLKP N+L++ D LKI DFGL+ P +
Sbjct: 149 FLYQILRGLKYIHSANVLHRDLKPSNLLINTTCD---LKICDFGLARIADPEHDHTGFLT 205
Query: 127 KVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRN 172
+ + Y APE+ L + Y + +D+WSVG IL E+L+ P F G++
Sbjct: 206 EXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 252
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 82/164 (50%), Gaps = 11/164 (6%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDA--FQAENCIFLVVEFCAGGNLSSYIRLHG-RV 63
+HL+ + E+ L S+ H NI++ + L++E+ G+L Y++ H R+
Sbjct: 53 EHLRD-FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI 111
Query: 64 PEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN 123
++ Q+ G+E L + IHRDL NIL ++++ +KI DFGL+ L
Sbjct: 112 DHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL---VENENRVKIGDFGLTKVLPQDK 168
Query: 124 YAEKV---CGSPL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN 163
KV SP+ + APE L ++ D+WS G +L+EL
Sbjct: 169 EXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 82/164 (50%), Gaps = 11/164 (6%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDA--FQAENCIFLVVEFCAGGNLSSYIRLHG-RV 63
+HL+ + E+ L S+ H NI++ + L++E+ G+L Y++ H R+
Sbjct: 57 EHLRD-FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI 115
Query: 64 PEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN 123
++ Q+ G+E L + IHRDL NIL ++++ +KI DFGL+ L
Sbjct: 116 DHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL---VENENRVKIGDFGLTKVLPQDK 172
Query: 124 YAEKV---CGSPL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN 163
KV SP+ + APE L ++ D+WS G +L+EL
Sbjct: 173 EXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 83/184 (45%), Gaps = 10/184 (5%)
Query: 1 MLKKLNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH 60
M+ + LK D E+ ++ H N++ L + + LV + G+L +
Sbjct: 65 MVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCL 124
Query: 61 GRVPEQTAR---KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGL-- 115
P + K Q G+ L+ +H IHRD+K NIL LD+ KI+DFGL
Sbjct: 125 DGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANIL---LDEAFTAKISDFGLAR 181
Query: 116 -SCTLYPGNYAEKVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
S ++ G+ YMAPE L+ + K D++S G +L E++ G P
Sbjct: 182 ASEKFAQTVMXSRIVGTTAYMAPEALRGE-ITPKSDIYSFGVVLLEIITGLPAVDEHREP 240
Query: 175 QLIV 178
QL++
Sbjct: 241 QLLL 244
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 82/164 (50%), Gaps = 11/164 (6%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDA--FQAENCIFLVVEFCAGGNLSSYIRLHG-RV 63
+HL+ + E+ L S+ H NI++ + L++E+ G+L Y++ H R+
Sbjct: 71 EHLRD-FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI 129
Query: 64 PEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN 123
++ Q+ G+E L + IHRDL NIL ++++ +KI DFGL+ L
Sbjct: 130 DHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL---VENENRVKIGDFGLTKVLPQDK 186
Query: 124 YAEKV---CGSPL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN 163
KV SP+ + APE L ++ D+WS G +L+EL
Sbjct: 187 EXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 82/164 (50%), Gaps = 11/164 (6%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDA--FQAENCIFLVVEFCAGGNLSSYIRLHG-RV 63
+HL+ + E+ L S+ H NI++ + L++E+ G+L Y++ H R+
Sbjct: 52 EHLRD-FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI 110
Query: 64 PEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN 123
++ Q+ G+E L + IHRDL NIL ++++ +KI DFGL+ L
Sbjct: 111 DHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL---VENENRVKIGDFGLTKVLPQDK 167
Query: 124 YAEKV---CGSPL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN 163
KV SP+ + APE L ++ D+WS G +L+EL
Sbjct: 168 EXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 82/164 (50%), Gaps = 11/164 (6%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDA--FQAENCIFLVVEFCAGGNLSSYIRLHG-RV 63
+HL+ + E+ L S+ H NI++ + L++E+ G+L Y++ H R+
Sbjct: 51 EHLRD-FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI 109
Query: 64 PEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN 123
++ Q+ G+E L + IHRDL NIL ++++ +KI DFGL+ L
Sbjct: 110 DHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL---VENENRVKIGDFGLTKVLPQDK 166
Query: 124 YAEKV---CGSPL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN 163
KV SP+ + APE L ++ D+WS G +L+EL
Sbjct: 167 EXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 82/164 (50%), Gaps = 11/164 (6%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDA--FQAENCIFLVVEFCAGGNLSSYIRLHG-RV 63
+HL+ + E+ L S+ H NI++ + L++E+ G+L Y++ H R+
Sbjct: 60 EHLRD-FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI 118
Query: 64 PEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN 123
++ Q+ G+E L + IHRDL NIL ++++ +KI DFGL+ L
Sbjct: 119 DHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL---VENENRVKIGDFGLTKVLPQDK 175
Query: 124 YAEKV---CGSPL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN 163
KV SP+ + APE L ++ D+WS G +L+EL
Sbjct: 176 EXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 93/201 (46%), Gaps = 28/201 (13%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQ--------- 66
E + + N +++RL +++E G+L SY+R PE
Sbjct: 100 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR--SLRPEMENNPVLAPP 157
Query: 67 TARKFLQQLGA---GLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN 123
+ K +Q G G+ LN++ +HRDL N +++ +D +KI DFG++ +Y +
Sbjct: 158 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA---EDFTVKIGDFGMTRDIYETD 214
Query: 124 YAEKVCGSPL---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIVP 179
Y K L +M+PE L+ + D+WS G +L+E+ P+ G +N Q++
Sbjct: 215 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF 274
Query: 180 ALH------PD-CVDMCLKLL 193
+ PD C DM +L+
Sbjct: 275 VMEGGLLDKPDNCPDMLFELM 295
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 82/164 (50%), Gaps = 11/164 (6%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDA--FQAENCIFLVVEFCAGGNLSSYIRLHG-RV 63
+HL+ + E+ L S+ H NI++ + L++E+ G+L Y++ H R+
Sbjct: 53 EHLRD-FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI 111
Query: 64 PEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN 123
++ Q+ G+E L + IHRDL NIL ++++ +KI DFGL+ L
Sbjct: 112 DHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL---VENENRVKIGDFGLTKVLPQDK 168
Query: 124 YAEKV---CGSPL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN 163
KV SP+ + APE L ++ D+WS G +L+EL
Sbjct: 169 EXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 82/164 (50%), Gaps = 11/164 (6%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDA--FQAENCIFLVVEFCAGGNLSSYIRLHG-RV 63
+HL+ + E+ L S+ H NI++ + L++E+ G+L Y++ H R+
Sbjct: 71 EHLRD-FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI 129
Query: 64 PEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN 123
++ Q+ G+E L + IHRDL NIL ++++ +KI DFGL+ L
Sbjct: 130 DHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL---VENENRVKIGDFGLTKVLPQDK 186
Query: 124 YAEKV---CGSPL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN 163
KV SP+ + APE L ++ D+WS G +L+EL
Sbjct: 187 EXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 28/201 (13%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQ--------- 66
E + + N +++RL +++E G+L SY+R PE
Sbjct: 65 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR--SLRPEMENNPVLAPP 122
Query: 67 TARKFLQQLGA---GLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN 123
+ K +Q G G+ LN++ +HRDL N ++ +D +KI DFG++ +Y +
Sbjct: 123 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCXVA---EDFTVKIGDFGMTRDIYETD 179
Query: 124 YAEKVCGSPL---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIVP 179
Y K L +M+PE L+ + D+WS G +L+E+ P+ G +N Q++
Sbjct: 180 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF 239
Query: 180 ALH------PD-CVDMCLKLL 193
+ PD C DM L+L+
Sbjct: 240 VMEGGLLDKPDNCPDMLLELM 260
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 82/164 (50%), Gaps = 11/164 (6%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDA--FQAENCIFLVVEFCAGGNLSSYIRLHG-RV 63
+HL+ + E+ L S+ H NI++ + L++E+ G+L Y++ H R+
Sbjct: 59 EHLRD-FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI 117
Query: 64 PEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN 123
++ Q+ G+E L + IHRDL NIL ++++ +KI DFGL+ L
Sbjct: 118 DHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL---VENENRVKIGDFGLTKVLPQDK 174
Query: 124 YAEKV---CGSPL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN 163
KV SP+ + APE L ++ D+WS G +L+EL
Sbjct: 175 EXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 82/164 (50%), Gaps = 11/164 (6%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDA--FQAENCIFLVVEFCAGGNLSSYIRLHG-RV 63
+HL+ + E+ L S+ H NI++ + L++E+ G+L Y++ H R+
Sbjct: 84 EHLRD-FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI 142
Query: 64 PEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN 123
++ Q+ G+E L + IHRDL NIL ++++ +KI DFGL+ L
Sbjct: 143 DHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL---VENENRVKIGDFGLTKVLPQDK 199
Query: 124 YAEKV---CGSPL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN 163
KV SP+ + APE L ++ D+WS G +L+EL
Sbjct: 200 EXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 82/164 (50%), Gaps = 11/164 (6%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDA--FQAENCIFLVVEFCAGGNLSSYIRLHG-RV 63
+HL+ + E+ L S+ H NI++ + L++E+ G+L Y++ H R+
Sbjct: 58 EHLRD-FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI 116
Query: 64 PEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN 123
++ Q+ G+E L + IHRDL NIL ++++ +KI DFGL+ L
Sbjct: 117 DHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL---VENENRVKIGDFGLTKVLPQDK 173
Query: 124 YAEKV---CGSPL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN 163
KV SP+ + APE L ++ D+WS G +L+EL
Sbjct: 174 EXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 83/184 (45%), Gaps = 10/184 (5%)
Query: 1 MLKKLNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH 60
M+ + LK D E+ ++ H N++ L + + LV + G+L +
Sbjct: 59 MVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCL 118
Query: 61 GRVPEQTAR---KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGL-- 115
P + K Q G+ L+ +H IHRD+K NIL LD+ KI+DFGL
Sbjct: 119 DGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANIL---LDEAFTAKISDFGLAR 175
Query: 116 -SCTLYPGNYAEKVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
S ++ G+ YMAPE L+ + K D++S G +L E++ G P
Sbjct: 176 ASEKFAQXVMXXRIVGTTAYMAPEALRGE-ITPKSDIYSFGVVLLEIITGLPAVDEHREP 234
Query: 175 QLIV 178
QL++
Sbjct: 235 QLLL 238
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 82/164 (50%), Gaps = 11/164 (6%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDA--FQAENCIFLVVEFCAGGNLSSYIRLHG-RV 63
+HL+ + E+ L S+ H NI++ + L++E+ G+L Y++ H R+
Sbjct: 56 EHLRD-FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI 114
Query: 64 PEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN 123
++ Q+ G+E L + IHRDL NIL ++++ +KI DFGL+ L
Sbjct: 115 DHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL---VENENRVKIGDFGLTKVLPQDK 171
Query: 124 YAEKV---CGSPL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN 163
KV SP+ + APE L ++ D+WS G +L+EL
Sbjct: 172 EXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 12/169 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH-GRVPEQTARKFLQQ 74
E+N + S++H N+IRL+ + +V E G+L +R H G T ++ Q
Sbjct: 61 EVNAMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ 119
Query: 75 LGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGS--- 131
+ G+ L S IHRDL N+LL+ D ++KI DFGL L P N V
Sbjct: 120 VAEGMGYLESKRFIHRDLAARNLLLATRD---LVKIGDFGLMRAL-PQNDDHXVMQEHRK 175
Query: 132 -PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
P + APE L+ + + D W G L+E+ G P+ G N Q++
Sbjct: 176 VPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQIL 224
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 83/184 (45%), Gaps = 10/184 (5%)
Query: 1 MLKKLNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH 60
M+ + LK D E+ ++ H N++ L + + LV + G+L +
Sbjct: 65 MVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCL 124
Query: 61 GRVPEQTAR---KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGL-- 115
P + K Q G+ L+ +H IHRD+K NIL LD+ KI+DFGL
Sbjct: 125 DGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANIL---LDEAFTAKISDFGLAR 181
Query: 116 -SCTLYPGNYAEKVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
S ++ G+ YMAPE L+ + K D++S G +L E++ G P
Sbjct: 182 ASEKFAQTVMXXRIVGTTAYMAPEALRGE-ITPKSDIYSFGVVLLEIITGLPAVDEHREP 240
Query: 175 QLIV 178
QL++
Sbjct: 241 QLLL 244
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 93/201 (46%), Gaps = 28/201 (13%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQ--------- 66
E + + N +++RL +++E G+L SY+R PE
Sbjct: 69 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR--SLRPEMENNPVLAPP 126
Query: 67 TARKFLQQLGA---GLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN 123
+ K +Q G G+ LN++ +HRDL N +++ +D +KI DFG++ +Y +
Sbjct: 127 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA---EDFTVKIGDFGMTRDIYETD 183
Query: 124 YAEKVCGSPL---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIVP 179
Y K L +M+PE L+ + D+WS G +L+E+ P+ G +N Q++
Sbjct: 184 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF 243
Query: 180 ALH------PD-CVDMCLKLL 193
+ PD C DM +L+
Sbjct: 244 VMEGGLLDKPDNCPDMLFELM 264
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 82/169 (48%), Gaps = 18/169 (10%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCI---FLVVEFCAGGNLSSYIR----LHGRVPEQTA 68
E L +NH NI++LF A + E L++EFC G+L + + +G +PE
Sbjct: 57 EFEVLKKLNHKNIVKLF-AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYG-LPESEF 114
Query: 69 RKFLQQLGAGLEILNSHHIIHRDLKPENIL-LSGLDDDVMLKIADFGLSCTLYPGNYAEK 127
L+ + G+ L + I+HR++KP NI+ + G D + K+ DFG + L
Sbjct: 115 LIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVX 174
Query: 128 VCGSPLYMAPEVLQF--------QRYDEKVDMWSVGAILFELLNGYPPF 168
+ G+ Y+ P++ + ++Y VD+WS+G + G PF
Sbjct: 175 LYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 93/201 (46%), Gaps = 28/201 (13%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQ--------- 66
E + + N +++RL +++E G+L SY+R PE
Sbjct: 65 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR--SLRPEMENNPVLAPP 122
Query: 67 TARKFLQQLGA---GLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN 123
+ K +Q G G+ LN++ +HRDL N +++ +D +KI DFG++ +Y +
Sbjct: 123 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA---EDFTVKIGDFGMTRDIYETD 179
Query: 124 YAEKVCGSPL---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIVP 179
Y K L +M+PE L+ + D+WS G +L+E+ P+ G +N Q++
Sbjct: 180 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF 239
Query: 180 ALH------PD-CVDMCLKLL 193
+ PD C DM +L+
Sbjct: 240 VMEGGLLDKPDNCPDMLFELM 260
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 93/201 (46%), Gaps = 28/201 (13%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQ--------- 66
E + + N +++RL +++E G+L SY+R PE
Sbjct: 72 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR--SLRPEMENNPVLAPP 129
Query: 67 TARKFLQQLGA---GLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN 123
+ K +Q G G+ LN++ +HRDL N +++ +D +KI DFG++ +Y +
Sbjct: 130 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA---EDFTVKIGDFGMTRDIYETD 186
Query: 124 YAEKVCGSPL---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIVP 179
Y K L +M+PE L+ + D+WS G +L+E+ P+ G +N Q++
Sbjct: 187 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF 246
Query: 180 ALH------PD-CVDMCLKLL 193
+ PD C DM +L+
Sbjct: 247 VMEGGLLDKPDNCPDMLFELM 267
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 12/169 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH-GRVPEQTARKFLQQ 74
E+N + S++H N+IRL+ + +V E G+L +R H G T ++ Q
Sbjct: 71 EVNAMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ 129
Query: 75 LGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGS--- 131
+ G+ L S IHRDL N+LL+ D ++KI DFGL L P N V
Sbjct: 130 VAEGMGYLESKRFIHRDLAARNLLLATRD---LVKIGDFGLMRAL-PQNDDHXVMQEHRK 185
Query: 132 -PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
P + APE L+ + + D W G L+E+ G P+ G N Q++
Sbjct: 186 VPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQIL 234
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 93/201 (46%), Gaps = 28/201 (13%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQ--------- 66
E + + N +++RL +++E G+L SY+R PE
Sbjct: 71 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR--SLRPEMENNPVLAPP 128
Query: 67 TARKFLQQLGA---GLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN 123
+ K +Q G G+ LN++ +HRDL N +++ +D +KI DFG++ +Y +
Sbjct: 129 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA---EDFTVKIGDFGMTRDIYETD 185
Query: 124 YAEKVCGSPL---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIVP 179
Y K L +M+PE L+ + D+WS G +L+E+ P+ G +N Q++
Sbjct: 186 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF 245
Query: 180 ALH------PD-CVDMCLKLL 193
+ PD C DM +L+
Sbjct: 246 VMEGGLLDKPDNCPDMLFELM 266
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 93/201 (46%), Gaps = 28/201 (13%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQ--------- 66
E + + N +++RL +++E G+L SY+R PE
Sbjct: 71 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR--SLRPEMENNPVLAPP 128
Query: 67 TARKFLQQLGA---GLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN 123
+ K +Q G G+ LN++ +HRDL N +++ +D +KI DFG++ +Y +
Sbjct: 129 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA---EDFTVKIGDFGMTRDIYETD 185
Query: 124 YAEKVCGSPL---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIVP 179
Y K L +M+PE L+ + D+WS G +L+E+ P+ G +N Q++
Sbjct: 186 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF 245
Query: 180 ALH------PD-CVDMCLKLL 193
+ PD C DM +L+
Sbjct: 246 VMEGGLLDKPDNCPDMLFELM 266
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 12/169 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH-GRVPEQTARKFLQQ 74
E+N + S++H N+IRL+ + +V E G+L +R H G T ++ Q
Sbjct: 61 EVNAMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ 119
Query: 75 LGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGS--- 131
+ G+ L S IHRDL N+LL+ D ++KI DFGL L P N V
Sbjct: 120 VAEGMGYLESKRFIHRDLAARNLLLATRD---LVKIGDFGLMRAL-PQNDDHYVMQEHRK 175
Query: 132 -PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
P + APE L+ + + D W G L+E+ G P+ G N Q++
Sbjct: 176 VPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQIL 224
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 91/169 (53%), Gaps = 13/169 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIR----LHGRVPEQTARKF 71
E + + H +++L+ A +E I++V+E+ + G+L +++ + R+P+
Sbjct: 63 EAQVMKKLRHEKLVQLY-AVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLV--DM 119
Query: 72 LQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY-AEKVCG 130
Q+ +G+ + + +HRDL+ NIL+ ++++ K+ADFGL+ + Y A +
Sbjct: 120 AAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLARLIEDNEYTARQGAK 176
Query: 131 SPL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
P+ + APE + R+ K D+WS G +L EL G P+ G N +++
Sbjct: 177 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 225
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 90/169 (53%), Gaps = 13/169 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIR----LHGRVPEQTARKF 71
E + + H +++L+ A +E I++V E+ + G+L +++ + R+P+
Sbjct: 63 EAQVMKKIRHEKLVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV--DM 119
Query: 72 LQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY-AEKVCG 130
Q+ +G+ + + +HRDL+ NIL+ ++++ K+ADFGL+ + Y A +
Sbjct: 120 AAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLARLIEDNEYTARQGAK 176
Query: 131 SPL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
P+ + APE + R+ K D+WS G +L EL G P+ G N +++
Sbjct: 177 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 225
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 12/169 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH-GRVPEQTARKFLQQ 74
E+N + S++H N+IRL+ + +V E G+L +R H G T ++ Q
Sbjct: 61 EVNAMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ 119
Query: 75 LGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGS--- 131
+ G+ L S IHRDL N+LL+ D ++KI DFGL L P N V
Sbjct: 120 VAEGMGYLESKRFIHRDLAARNLLLATRD---LVKIGDFGLMRAL-PQNDDHYVMQEHRK 175
Query: 132 -PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
P + APE L+ + + D W G L+E+ G P+ G N Q++
Sbjct: 176 VPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQIL 224
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 12/169 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH-GRVPEQTARKFLQQ 74
E+N + S++H N+IRL+ + +V E G+L +R H G T ++ Q
Sbjct: 65 EVNAMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ 123
Query: 75 LGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGS--- 131
+ G+ L S IHRDL N+LL+ D ++KI DFGL L P N V
Sbjct: 124 VAEGMGYLESKRFIHRDLAARNLLLATRD---LVKIGDFGLMRAL-PQNDDHYVMQEHRK 179
Query: 132 -PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
P + APE L+ + + D W G L+E+ G P+ G N Q++
Sbjct: 180 VPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQIL 228
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 76/155 (49%), Gaps = 19/155 (12%)
Query: 28 IIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHI 87
IIRL+D + I++V+E C +L+S+++ + + + + + + ++ H I
Sbjct: 118 IIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGI 176
Query: 88 IHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYA---EKVCGSPLYMAPEVLQFQR 144
+H DLKP N L+ D MLK+ DFG++ + P + + G+ YM PE ++
Sbjct: 177 VHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 232
Query: 145 YDEK-----------VDMWSVGAILFELLNGYPPF 168
+ D+WS+G IL+ + G PF
Sbjct: 233 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 267
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 93/201 (46%), Gaps = 28/201 (13%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQ--------- 66
E + + N +++RL +++E G+L SY+R PE
Sbjct: 78 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR--SLRPEMENNPVLAPP 135
Query: 67 TARKFLQQLGA---GLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN 123
+ K +Q G G+ LN++ +HRDL N +++ +D +KI DFG++ +Y +
Sbjct: 136 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA---EDFTVKIGDFGMTRDIYETD 192
Query: 124 YAEKVCGSPL---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIVP 179
Y K L +M+PE L+ + D+WS G +L+E+ P+ G +N Q++
Sbjct: 193 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF 252
Query: 180 ALH------PD-CVDMCLKLL 193
+ PD C DM +L+
Sbjct: 253 VMEGGLLDKPDNCPDMLFELM 273
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 76/155 (49%), Gaps = 19/155 (12%)
Query: 28 IIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHI 87
IIRL+D + I++V+E C +L+S+++ + + + + + + ++ H I
Sbjct: 71 IIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGI 129
Query: 88 IHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYA---EKVCGSPLYMAPEVLQFQR 144
+H DLKP N L+ D MLK+ DFG++ + P + + G+ YM PE ++
Sbjct: 130 VHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 185
Query: 145 YDEK-----------VDMWSVGAILFELLNGYPPF 168
+ D+WS+G IL+ + G PF
Sbjct: 186 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 220
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 76/155 (49%), Gaps = 19/155 (12%)
Query: 28 IIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHI 87
IIRL+D + I++V+E C +L+S+++ + + + + + + ++ H I
Sbjct: 90 IIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGI 148
Query: 88 IHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYA---EKVCGSPLYMAPEVLQFQR 144
+H DLKP N L+ D MLK+ DFG++ + P + + G+ YM PE ++
Sbjct: 149 VHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 204
Query: 145 YDEK-----------VDMWSVGAILFELLNGYPPF 168
+ D+WS+G IL+ + G PF
Sbjct: 205 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 239
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 76/155 (49%), Gaps = 19/155 (12%)
Query: 28 IIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHI 87
IIRL+D + I++V+E C +L+S+++ + + + + + + ++ H I
Sbjct: 118 IIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGI 176
Query: 88 IHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYA---EKVCGSPLYMAPEVLQFQR 144
+H DLKP N L+ D MLK+ DFG++ + P + + G+ YM PE ++
Sbjct: 177 VHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 232
Query: 145 YDEK-----------VDMWSVGAILFELLNGYPPF 168
+ D+WS+G IL+ + G PF
Sbjct: 233 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 267
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 76/156 (48%), Gaps = 19/156 (12%)
Query: 28 IIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHI 87
IIRL+D + I++V+E C +L+S+++ + + + + + + ++ H I
Sbjct: 74 IIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGI 132
Query: 88 IHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYA---EKVCGSPLYMAPEVLQFQR 144
+H DLKP N L+ D MLK+ DFG++ + P + + G+ YM PE ++
Sbjct: 133 VHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 188
Query: 145 YDEK-----------VDMWSVGAILFELLNGYPPFS 169
+ D+WS+G IL+ + G PF
Sbjct: 189 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 224
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 12/169 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH-GRVPEQTARKFLQQ 74
E+N + S++H N+IRL+ + +V E G+L +R H G T ++ Q
Sbjct: 65 EVNAMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ 123
Query: 75 LGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGS--- 131
+ G+ L S IHRDL N+LL+ D ++KI DFGL L P N V
Sbjct: 124 VAEGMGYLESKRFIHRDLAARNLLLATRD---LVKIGDFGLMRAL-PQNDDHYVMQEHRK 179
Query: 132 -PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
P + APE L+ + + D W G L+E+ G P+ G N Q++
Sbjct: 180 VPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQIL 228
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 93/199 (46%), Gaps = 24/199 (12%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRL-------HGRVPEQTA 68
E + + N +++RL +++E G+L SY+R + + +
Sbjct: 68 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSL 127
Query: 69 RKFLQQLGA---GLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYA 125
K +Q G G+ LN++ +HRDL N +++ +D +KI DFG++ +Y +Y
Sbjct: 128 SKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA---EDFTVKIGDFGMTRDIYETDYY 184
Query: 126 EKVCGSPL---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIVPAL 181
K L +M+PE L+ + D+WS G +L+E+ P+ G +N Q++ +
Sbjct: 185 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM 244
Query: 182 H------PD-CVDMCLKLL 193
PD C DM +L+
Sbjct: 245 EGGLLDKPDNCPDMLFELM 263
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 89/169 (52%), Gaps = 13/169 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHG----RVPEQTARKF 71
E + + H +++L+ A +E I++V E+ + G+L +++ R+P+
Sbjct: 229 EAQVMKKLRHEKLVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLV--DM 285
Query: 72 LQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY-AEKVCG 130
Q+ +G+ + + +HRDL+ NIL+ ++++ K+ADFGL+ + Y A +
Sbjct: 286 AAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLARLIEDNEYTARQGAK 342
Query: 131 SPL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
P+ + APE + R+ K D+WS G +L EL G P+ G N +++
Sbjct: 343 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 391
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 76/156 (48%), Gaps = 19/156 (12%)
Query: 28 IIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHI 87
IIRL+D + I++V+E C +L+S+++ + + + + + + ++ H I
Sbjct: 70 IIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGI 128
Query: 88 IHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYA---EKVCGSPLYMAPEVLQFQR 144
+H DLKP N L+ D MLK+ DFG++ + P + + G+ YM PE ++
Sbjct: 129 VHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 184
Query: 145 YDEK-----------VDMWSVGAILFELLNGYPPFS 169
+ D+WS+G IL+ + G PF
Sbjct: 185 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 220
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 89/169 (52%), Gaps = 13/169 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHG----RVPEQTARKF 71
E + + H +++L+ A +E I++V E+ + G+L +++ R+P+
Sbjct: 229 EAQVMKKLRHEKLVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLV--DM 285
Query: 72 LQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY-AEKVCG 130
Q+ +G+ + + +HRDL+ NIL+ ++++ K+ADFGL+ + Y A +
Sbjct: 286 AAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLARLIEDNEYTARQGAK 342
Query: 131 SPL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
P+ + APE + R+ K D+WS G +L EL G P+ G N +++
Sbjct: 343 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 391
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 76/155 (49%), Gaps = 19/155 (12%)
Query: 28 IIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHI 87
IIRL+D + I++V+E C +L+S+++ + + + + + + ++ H I
Sbjct: 118 IIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGI 176
Query: 88 IHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYA---EKVCGSPLYMAPEVLQFQR 144
+H DLKP N L+ D MLK+ DFG++ + P + + G+ YM PE ++
Sbjct: 177 VHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMS 232
Query: 145 YDEK-----------VDMWSVGAILFELLNGYPPF 168
+ D+WS+G IL+ + G PF
Sbjct: 233 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 267
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 12/169 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH-GRVPEQTARKFLQQ 74
E+N + S++H N+IRL+ + +V E G+L +R H G T ++ Q
Sbjct: 71 EVNAMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ 129
Query: 75 LGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGS--- 131
+ G+ L S IHRDL N+LL+ D ++KI DFGL L P N V
Sbjct: 130 VAEGMGYLESKRFIHRDLAARNLLLATRD---LVKIGDFGLMRAL-PQNDDHYVMQEHRK 185
Query: 132 -PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
P + APE L+ + + D W G L+E+ G P+ G N Q++
Sbjct: 186 VPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQIL 234
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 85/158 (53%), Gaps = 13/158 (8%)
Query: 20 LSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH-GRVPEQTARKFLQQLGAG 78
+ S++H +I+RL + + LV ++ G+L ++R H G + Q + Q+ G
Sbjct: 87 IGSLDHAHIVRLL-GLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKG 145
Query: 79 LEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN----YAEKVCGSPL- 133
+ L H ++HR+L N+LL +++ADFG++ L P + Y+E +P+
Sbjct: 146 MYYLEEHGMVHRNLAARNVLLK---SPSQVQVADFGVADLLPPDDKQLLYSE--AKTPIK 200
Query: 134 YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSG 170
+MA E + F +Y + D+WS G ++EL+ G P++G
Sbjct: 201 WMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAG 238
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 89/169 (52%), Gaps = 13/169 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHG----RVPEQTARKF 71
E + + H +++L+ A +E I++V E+ + G+L +++ R+P+
Sbjct: 56 EAQVMKKLRHEKLVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLV--DM 112
Query: 72 LQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY-AEKVCG 130
Q+ +G+ + + +HRDL+ NIL+ ++++ K+ADFGL+ + Y A +
Sbjct: 113 AAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLARLIEDNEYTARQGAK 169
Query: 131 SPL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
P+ + APE + R+ K D+WS G +L EL G P+ G N +++
Sbjct: 170 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 218
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 93/199 (46%), Gaps = 24/199 (12%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRL-------HGRVPEQTA 68
E + + N +++RL +++E G+L SY+R + + +
Sbjct: 78 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSL 137
Query: 69 RKFLQQLGA---GLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYA 125
K +Q G G+ LN++ +HRDL N +++ +D +KI DFG++ +Y +Y
Sbjct: 138 SKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA---EDFTVKIGDFGMTRDIYETDYY 194
Query: 126 EKVCGSPL---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIVPAL 181
K L +M+PE L+ + D+WS G +L+E+ P+ G +N Q++ +
Sbjct: 195 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM 254
Query: 182 H------PD-CVDMCLKLL 193
PD C DM +L+
Sbjct: 255 EGGLLDKPDNCPDMLFELM 273
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 85/158 (53%), Gaps = 13/158 (8%)
Query: 20 LSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH-GRVPEQTARKFLQQLGAG 78
+ S++H +I+RL + + LV ++ G+L ++R H G + Q + Q+ G
Sbjct: 69 IGSLDHAHIVRLL-GLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKG 127
Query: 79 LEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN----YAEKVCGSPL- 133
+ L H ++HR+L N+LL +++ADFG++ L P + Y+E +P+
Sbjct: 128 MYYLEEHGMVHRNLAARNVLLK---SPSQVQVADFGVADLLPPDDKQLLYSE--AKTPIK 182
Query: 134 YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSG 170
+MA E + F +Y + D+WS G ++EL+ G P++G
Sbjct: 183 WMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAG 220
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 90/169 (53%), Gaps = 13/169 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIR----LHGRVPEQTARKF 71
E + + H +++L+ A +E I++V E+ + G+L +++ + R+P+
Sbjct: 54 EAQVMKKLRHEKLVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV--DM 110
Query: 72 LQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY-AEKVCG 130
Q+ +G+ + + +HRDL+ NIL+ ++++ K+ADFGL+ + Y A +
Sbjct: 111 AAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLARLIEDNEYTARQGAK 167
Query: 131 SPL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
P+ + APE + R+ K D+WS G +L EL G P+ G N +++
Sbjct: 168 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 216
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 19/165 (11%)
Query: 28 IIRLFDAFQAENCIFLVVEFCAGGNLSSYIRL--------HGRVPEQTARKFLQ---QLG 76
++RL +V+E A G+L SY+R GR P T ++ +Q ++
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR-PPPTLQEMIQMAAEIA 140
Query: 77 AGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPL--- 133
G+ LN+ +HRDL N +++ D +KI DFG++ + + K L
Sbjct: 141 DGMAYLNAKKFVHRDLAARNCMVA---HDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 197
Query: 134 YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
+MAPE L+ + DMWS G +L+E+ + P+ G +N Q++
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL 242
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 19/165 (11%)
Query: 28 IIRLFDAFQAENCIFLVVEFCAGGNLSSYIRL--------HGRVPEQTARKFLQ---QLG 76
++RL +V+E A G+L SY+R GR P T ++ +Q ++
Sbjct: 79 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR-PPPTLQEMIQMAAEIA 137
Query: 77 AGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPL--- 133
G+ LN+ +HRDL N +++ D +KI DFG++ + + K L
Sbjct: 138 DGMAYLNAKKFVHRDLAARNCMVA---HDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 194
Query: 134 YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
+MAPE L+ + DMWS G +L+E+ + P+ G +N Q++
Sbjct: 195 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL 239
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 19/165 (11%)
Query: 28 IIRLFDAFQAENCIFLVVEFCAGGNLSSYIRL--------HGRVPEQTARKFLQ---QLG 76
++RL +V+E A G+L SY+R GR P T ++ +Q ++
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR-PPPTLQEMIQMAAEIA 140
Query: 77 AGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPL--- 133
G+ LN+ +HRDL N +++ D +KI DFG++ + + K L
Sbjct: 141 DGMAYLNAKKFVHRDLAARNCMVA---HDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 197
Query: 134 YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
+MAPE L+ + DMWS G +L+E+ + P+ G +N Q++
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL 242
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 90/169 (53%), Gaps = 13/169 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIR----LHGRVPEQTARKF 71
E + + H +++L+ A +E I++V E+ + G+L +++ + R+P+
Sbjct: 52 EAQVMKKLRHEKLVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV--DM 108
Query: 72 LQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY-AEKVCG 130
Q+ +G+ + + +HRDL+ NIL+ ++++ K+ADFGL+ + Y A +
Sbjct: 109 AAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLARLIEDNEYTARQGAK 165
Query: 131 SPL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
P+ + APE + R+ K D+WS G +L EL G P+ G N +++
Sbjct: 166 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 214
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 77/158 (48%), Gaps = 11/158 (6%)
Query: 19 FLSSVNHPNIIRLFD-AFQAENCIFLVVEFCAGGNLSSYIRLHGRVPE-QTARKFLQQLG 76
+ +NHPN++ L E +++ + G+L +IR R P + F Q+
Sbjct: 75 LMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVA 134
Query: 77 AGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY----AEKVCGSP 132
G+E L +HRDL N +L D+ +K+ADFGL+ + Y + P
Sbjct: 135 RGMEYLAEQKFVHRDLAARNCML---DESFTVKVADFGLARDILDREYYSVQQHRHARLP 191
Query: 133 L-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPF 168
+ + A E LQ R+ K D+WS G +L+ELL G PP+
Sbjct: 192 VKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPY 229
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 90/169 (53%), Gaps = 13/169 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIR----LHGRVPEQTARKF 71
E + + H +++L+ A +E I++V E+ + G+L +++ + R+P+
Sbjct: 63 EAQVMKKLRHEKLVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV--DM 119
Query: 72 LQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY-AEKVCG 130
Q+ +G+ + + +HRDL+ NIL+ ++++ K+ADFGL+ + Y A +
Sbjct: 120 AAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLARLIEDNEYTARQGAK 176
Query: 131 SPL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
P+ + APE + R+ K D+WS G +L EL G P+ G N +++
Sbjct: 177 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 225
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 94/204 (46%), Gaps = 33/204 (16%)
Query: 10 KSCLDCELNFLSSV-NHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPE--- 65
K L EL +S + H NI+ L A + ++ E+C G+L +++R RV E
Sbjct: 93 KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDP 152
Query: 66 ------QTARK-----FLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFG 114
TA F Q+ G+ L S + IHRD+ N+LL+ + + KI DFG
Sbjct: 153 AFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLT---NGHVAKIGDFG 209
Query: 115 LSCTLY-PGNYAEKVCGS-PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSG 170
L+ + NY K P+ +MAPE + Y + D+WS G +L+E+ + G P+ G
Sbjct: 210 LARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG 269
Query: 171 -----------RNNVQLIVPALHP 183
++ Q+ PA P
Sbjct: 270 ILVNSKFYKLVKDGYQMAQPAFAP 293
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 78/159 (49%), Gaps = 9/159 (5%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH-GRVPEQTARKFLQQ 74
E + +H NIIRL + ++ E+ G L ++R G L+
Sbjct: 96 EAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRG 155
Query: 75 LGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLY---PGNYAEKVCGS 131
+ AG++ L + + +HRDL NIL+ + +++ K++DFGLS L Y
Sbjct: 156 IAAGMKYLANMNYVHRDLAARNILV---NSNLVCKVSDFGLSRVLEDDPEATYTTSGGKI 212
Query: 132 PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPF 168
P+ + APE + ++++ D+WS G +++E++ G P+
Sbjct: 213 PIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPY 251
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 86/168 (51%), Gaps = 11/168 (6%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIR-LHGRVPE-QTARKFLQ 73
E + + H +++L+ A +E I++V E+ G+L +++ GR +
Sbjct: 54 EAQIMKKLKHDKLVQLY-AVVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAA 112
Query: 74 QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPL 133
Q+ AG+ + + IHRDL+ NIL+ + ++ KIADFGL+ L N G+
Sbjct: 113 QVAAGMAYIERMNYIHRDLRSANILVG---NGLICKIADFGLA-RLIEDNEXTARQGAKF 168
Query: 134 ---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
+ APE + R+ K D+WS G +L EL+ G P+ G NN +++
Sbjct: 169 PIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVL 216
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 89/169 (52%), Gaps = 13/169 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHG----RVPEQTARKF 71
E + + H +++L+ A +E I++V E+ + G+L +++ R+P+
Sbjct: 312 EAQVMKKLRHEKLVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLV--DM 368
Query: 72 LQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY-AEKVCG 130
Q+ +G+ + + +HRDL+ NIL+ ++++ K+ADFGL+ + Y A +
Sbjct: 369 AAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLARLIEDNEYTARQGAK 425
Query: 131 SPL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
P+ + APE + R+ K D+WS G +L EL G P+ G N +++
Sbjct: 426 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 474
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 81/164 (49%), Gaps = 15/164 (9%)
Query: 16 ELNFLSSVNHPNIIRLFDAF-----QAENCIFLVVEFCAGGNLSSYIRLHGR---VPEQT 67
E+ L+ +HPNI+ L D F A + ++LV E +L+ I H + + Q
Sbjct: 79 EIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVI--HDQRIVISPQH 135
Query: 68 ARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEK 127
+ F+ + GL +L+ ++HRDL P NILL+ +D + I DF L+
Sbjct: 136 IQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNND---ITICDFNLAREDTADANKTH 192
Query: 128 VCGSPLYMAPE-VLQFQRYDEKVDMWSVGAILFELLNGYPPFSG 170
Y APE V+QF+ + + VDMWS G ++ E+ N F G
Sbjct: 193 YVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRG 236
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 75/156 (48%), Gaps = 19/156 (12%)
Query: 28 IIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHI 87
IIRL+D + I++V+E C +L+S+++ + + + + + + ++ H I
Sbjct: 90 IIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGI 148
Query: 88 IHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY---AEKVCGSPLYMAPEVLQFQR 144
+H DLKP N L+ D MLK+ DFG++ + P + G+ YM PE ++
Sbjct: 149 VHSDLKPANFLIV----DGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMS 204
Query: 145 YDEK-----------VDMWSVGAILFELLNGYPPFS 169
+ D+WS+G IL+ + G PF
Sbjct: 205 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 240
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 81/164 (49%), Gaps = 15/164 (9%)
Query: 16 ELNFLSSVNHPNIIRLFDAF-----QAENCIFLVVEFCAGGNLSSYIRLHGR---VPEQT 67
E+ L+ +HPNI+ L D F A + ++LV E +L+ I H + + Q
Sbjct: 79 EIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVI--HDQRIVISPQH 135
Query: 68 ARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEK 127
+ F+ + GL +L+ ++HRDL P NILL+ +D + I DF L+
Sbjct: 136 IQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNND---ITICDFNLAREDTADANKTH 192
Query: 128 VCGSPLYMAPE-VLQFQRYDEKVDMWSVGAILFELLNGYPPFSG 170
Y APE V+QF+ + + VDMWS G ++ E+ N F G
Sbjct: 193 YVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRG 236
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 82/164 (50%), Gaps = 11/164 (6%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDA--FQAENCIFLVVEFCAGGNLSSYIRLHG-RV 63
+HL+ + E+ L S+ H NI++ + L++E+ G+L Y++ H R+
Sbjct: 53 EHLRD-FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI 111
Query: 64 PEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN 123
++ Q+ G+E L + IHRDL NIL ++++ +KI DFGL+ L
Sbjct: 112 DHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL---VENENRVKIGDFGLTKVLPQDK 168
Query: 124 YAEKV---CGSPL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN 163
KV SP+ + APE L ++ D+WS G +L+EL
Sbjct: 169 EFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 89/169 (52%), Gaps = 13/169 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIR----LHGRVPEQTARKF 71
E + + H +++L+ A +E I++V E+ + G+L +++ + R+P+
Sbjct: 230 EAQVMKKLRHEKLVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV--DM 286
Query: 72 LQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY-AEKVCG 130
Q+ +G+ + + +HRDL+ NIL+ ++++ K+ADFGL + Y A +
Sbjct: 287 AAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLGRLIEDNEYTARQGAK 343
Query: 131 SPL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
P+ + APE + R+ K D+WS G +L EL G P+ G N +++
Sbjct: 344 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 392
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 90/169 (53%), Gaps = 13/169 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIR----LHGRVPEQTARKF 71
E + + H +++L+ A +E I++V E+ + G+L +++ + R+P+
Sbjct: 63 EAQVMKKLRHEKLVQLY-AVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLV--DM 119
Query: 72 LQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY-AEKVCG 130
Q+ +G+ + + +HRDL+ NIL+ ++++ K+ADFGL+ + Y A +
Sbjct: 120 AAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLARLIEDNEYTARQGAK 176
Query: 131 SPL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
P+ + APE + R+ K D+WS G +L EL G P+ G N +++
Sbjct: 177 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 225
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 67.4 bits (163), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 33/204 (16%)
Query: 10 KSCLDCELNFLSSV-NHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQ-- 66
K L EL +S + H NI+ L A + ++ E+C G+L +++R RV E
Sbjct: 93 KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDP 152
Query: 67 ---------TARK---FLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFG 114
+ R F Q+ G+ L S + IHRD+ N+LL+ + + KI DFG
Sbjct: 153 AFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLT---NGHVAKIGDFG 209
Query: 115 LSCTLY-PGNYAEKVCGS-PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSG 170
L+ + NY K P+ +MAPE + Y + D+WS G +L+E+ + G P+ G
Sbjct: 210 LARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG 269
Query: 171 -----------RNNVQLIVPALHP 183
++ Q+ PA P
Sbjct: 270 ILVNSKFYKLVKDGYQMAQPAFAP 293
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 43/201 (21%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAENC-----IFLVVEFCAGG 51
+KK+ + + +DC E+ L+ +NH +++++ D ++ +++V+E A
Sbjct: 83 IKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEI-ADS 141
Query: 52 NLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIA 111
+ R + E + L L G++ ++S I+HRDLKP N L ++ D +K+
Sbjct: 142 DFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCL---VNQDCSVKVC 198
Query: 112 DFGLSCTL-YPGNYAEKVCGSP---------------------------LYMAPEVLQFQ 143
DFGL+ T+ YP N ++ SP Y APE++ Q
Sbjct: 199 DFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQ 258
Query: 144 R-YDEKVDMWSVGAILFELLN 163
Y E +D+WS+G I ELLN
Sbjct: 259 ENYTEAIDVWSIGCIFAELLN 279
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 94/198 (47%), Gaps = 9/198 (4%)
Query: 22 SVNHPNIIRLFDAFQAENCIFLVVEFCAG-GNLSSYIRLHGRVPEQTARKFLQQLGAGLE 80
S +IRL D F+ + L++E +L +I G + E+ AR F Q+ +
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 124
Query: 81 ILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVL 140
++ ++HRD+K ENIL+ + LK+ DFG L Y + G+ +Y PE +
Sbjct: 125 HCHNXGVLHRDIKDENILIDLNRGE--LKLIDFGSGALLKDTVYTD-FDGTRVYSPPEWI 181
Query: 141 QFQRYDEK-VDMWSVGAILFELLNGYPPFSGRNNV----QLIVPALHPDCVDMCLKLLSA 195
++ RY + +WS+G +L++++ G PF + + +C + L+
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCLAL 241
Query: 196 NTVDRLSFNEFYHHRFLR 213
DR +F E +H +++
Sbjct: 242 RPSDRPTFEEIQNHPWMQ 259
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 94/198 (47%), Gaps = 9/198 (4%)
Query: 22 SVNHPNIIRLFDAFQAENCIFLVVEFCAG-GNLSSYIRLHGRVPEQTARKFLQQLGAGLE 80
S +IRL D F+ + L++E +L +I G + E+ AR F Q+ +
Sbjct: 69 SSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLEAVR 128
Query: 81 ILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVL 140
++ ++HRD+K ENIL+ + LK+ DFG L Y + G+ +Y PE +
Sbjct: 129 HCHNCGVLHRDIKDENILIDLNRGE--LKLIDFGSGALLKDTVYTD-FDGTRVYSPPEWI 185
Query: 141 QFQRYDEK-VDMWSVGAILFELLNGYPPFSGRNNV----QLIVPALHPDCVDMCLKLLSA 195
++ RY + +WS+G +L++++ G PF + + +C + L+
Sbjct: 186 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLAL 245
Query: 196 NTVDRLSFNEFYHHRFLR 213
DR +F E +H +++
Sbjct: 246 RPSDRPTFEEIQNHPWMQ 263
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 93/193 (48%), Gaps = 9/193 (4%)
Query: 27 NIIRLFDAFQAENCIFLVVEFCAG-GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSH 85
+IRL D F+ + L++E +L +I G + E+ AR F Q+ + ++
Sbjct: 117 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 176
Query: 86 HIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVLQFQRY 145
++HRD+K ENIL+ + LK+ DFG L Y + G+ +Y PE +++ RY
Sbjct: 177 GVLHRDIKDENILIDLNRGE--LKLIDFGSGALLKDTVYTD-FDGTRVYSPPEWIRYHRY 233
Query: 146 DEK-VDMWSVGAILFELLNGYPPFSGRNNV----QLIVPALHPDCVDMCLKLLSANTVDR 200
+ +WS+G +L++++ G PF + + +C + L+ DR
Sbjct: 234 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSDR 293
Query: 201 LSFNEFYHHRFLR 213
+F E +H +++
Sbjct: 294 PTFEEIQNHPWMQ 306
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 89/169 (52%), Gaps = 13/169 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHG----RVPEQTARKF 71
E + + H +++L+ A +E I++V E+ + G+L +++ R+P+
Sbjct: 229 EAQVMKKLRHEKLVQLY-AVVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLV--DM 285
Query: 72 LQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY-AEKVCG 130
Q+ +G+ + + +HRDL+ NIL+ ++++ K+ADFGL+ + Y A +
Sbjct: 286 AAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLARLIEDNEYTARQGAK 342
Query: 131 SPL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
P+ + APE + R+ K D+WS G +L EL G P+ G N +++
Sbjct: 343 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 391
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 89/169 (52%), Gaps = 13/169 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIR----LHGRVPEQTARKF 71
E + + H +++L+ A +E I++V E+ + G+L +++ + R+P+
Sbjct: 63 EAQVMKKLRHEKLVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV--DM 119
Query: 72 LQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY-AEKVCG 130
Q+ +G+ + + +HRDL NIL+ ++++ K+ADFGL+ + Y A +
Sbjct: 120 AAQIASGMAYVERMNYVHRDLAAANILVG---ENLVCKVADFGLARLIEDNEYTARQGAK 176
Query: 131 SPL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
P+ + APE + R+ K D+WS G +L EL G P+ G N +++
Sbjct: 177 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 225
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 91/199 (45%), Gaps = 41/199 (20%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAENCI-----FLVVEFCAGG 51
+KK+N+ + +DC E+ L+ + IIRL D E+ + ++V+E A
Sbjct: 58 IKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLHDLIIPEDLLKFDELYIVLEI-ADS 116
Query: 52 NLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIA 111
+L + + EQ + L L G + ++ IIHRDLKP N L L+ D +KI
Sbjct: 117 DLKKLFKTPIFLTEQHVKTILYNLLLGEKFIHESGIIHRDLKPANCL---LNQDCSVKIC 173
Query: 112 DFGLSCTL-------------------YPG----NYAEKVCG---SPLYMAPEVLQFQR- 144
DFGL+ T+ PG N +++ + Y APE++ Q
Sbjct: 174 DFGLARTINSDKDIHIVNDLEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQEN 233
Query: 145 YDEKVDMWSVGAILFELLN 163
Y +D+WS G I ELLN
Sbjct: 234 YTNSIDIWSTGCIFAELLN 252
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 67.0 bits (162), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 93/193 (48%), Gaps = 9/193 (4%)
Query: 27 NIIRLFDAFQAENCIFLVVEFCAG-GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSH 85
+IRL D F+ + L++E +L +I G + E+ AR F Q+ + ++
Sbjct: 102 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 161
Query: 86 HIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVLQFQRY 145
++HRD+K ENIL+ + LK+ DFG L Y + G+ +Y PE +++ RY
Sbjct: 162 GVLHRDIKDENILIDLNRGE--LKLIDFGSGALLKDTVYTD-FDGTRVYSPPEWIRYHRY 218
Query: 146 DEK-VDMWSVGAILFELLNGYPPFSGRNNV----QLIVPALHPDCVDMCLKLLSANTVDR 200
+ +WS+G +L++++ G PF + + +C + L+ DR
Sbjct: 219 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSDR 278
Query: 201 LSFNEFYHHRFLR 213
+F E +H +++
Sbjct: 279 PTFEEIQNHPWMQ 291
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 67.0 bits (162), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 93/193 (48%), Gaps = 9/193 (4%)
Query: 27 NIIRLFDAFQAENCIFLVVEFCAG-GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSH 85
+IRL D F+ + L++E +L +I G + E+ AR F Q+ + ++
Sbjct: 102 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 161
Query: 86 HIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVLQFQRY 145
++HRD+K ENIL+ + LK+ DFG L Y + G+ +Y PE +++ RY
Sbjct: 162 GVLHRDIKDENILIDLNRGE--LKLIDFGSGALLKDTVYTD-FDGTRVYSPPEWIRYHRY 218
Query: 146 DEK-VDMWSVGAILFELLNGYPPFSGRNNV----QLIVPALHPDCVDMCLKLLSANTVDR 200
+ +WS+G +L++++ G PF + + +C + L+ DR
Sbjct: 219 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHLIRWCLALRPSDR 278
Query: 201 LSFNEFYHHRFLR 213
+F E +H +++
Sbjct: 279 PTFEEIQNHPWMQ 291
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 93/193 (48%), Gaps = 9/193 (4%)
Query: 27 NIIRLFDAFQAENCIFLVVEFCAG-GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSH 85
+IRL D F+ + L++E +L +I G + E+ AR F Q+ + ++
Sbjct: 102 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 161
Query: 86 HIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVLQFQRY 145
++HRD+K ENIL+ + LK+ DFG L Y + G+ +Y PE +++ RY
Sbjct: 162 GVLHRDIKDENILIDLNRGE--LKLIDFGSGALLKDTVYTD-FDGTRVYSPPEWIRYHRY 218
Query: 146 DEK-VDMWSVGAILFELLNGYPPFSGRNNV----QLIVPALHPDCVDMCLKLLSANTVDR 200
+ +WS+G +L++++ G PF + + +C + L+ DR
Sbjct: 219 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHLIRWCLALRPSDR 278
Query: 201 LSFNEFYHHRFLR 213
+F E +H +++
Sbjct: 279 PTFEEIQNHPWMQ 291
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 93/193 (48%), Gaps = 9/193 (4%)
Query: 27 NIIRLFDAFQAENCIFLVVEFCAG-GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSH 85
+IRL D F+ + L++E +L +I G + E+ AR F Q+ + ++
Sbjct: 103 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 162
Query: 86 HIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVLQFQRY 145
++HRD+K ENIL+ + LK+ DFG L Y + G+ +Y PE +++ RY
Sbjct: 163 GVLHRDIKDENILIDLNRGE--LKLIDFGSGALLKDTVYTD-FDGTRVYSPPEWIRYHRY 219
Query: 146 DEK-VDMWSVGAILFELLNGYPPFSGRNNV----QLIVPALHPDCVDMCLKLLSANTVDR 200
+ +WS+G +L++++ G PF + + +C + L+ DR
Sbjct: 220 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHLIRWCLALRPSDR 279
Query: 201 LSFNEFYHHRFLR 213
+F E +H +++
Sbjct: 280 PTFEEIQNHPWMQ 292
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 94/198 (47%), Gaps = 9/198 (4%)
Query: 22 SVNHPNIIRLFDAFQAENCIFLVVEFCAG-GNLSSYIRLHGRVPEQTARKFLQQLGAGLE 80
S +IRL D F+ + L++E +L +I G + E+ AR F Q+ +
Sbjct: 112 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 171
Query: 81 ILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVL 140
++ ++HRD+K ENIL+ + LK+ DFG L Y + G+ +Y PE +
Sbjct: 172 HCHNCGVLHRDIKDENILIDLNRGE--LKLIDFGSGALLKDTVYTD-FDGTRVYSPPEWI 228
Query: 141 QFQRYDEK-VDMWSVGAILFELLNGYPPFSGRNNV----QLIVPALHPDCVDMCLKLLSA 195
++ RY + +WS+G +L++++ G PF + + +C + L+
Sbjct: 229 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLAL 288
Query: 196 NTVDRLSFNEFYHHRFLR 213
DR +F E +H +++
Sbjct: 289 RPSDRPTFEEIQNHPWMQ 306
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 94/198 (47%), Gaps = 9/198 (4%)
Query: 22 SVNHPNIIRLFDAFQAENCIFLVVEFCAG-GNLSSYIRLHGRVPEQTARKFLQQLGAGLE 80
S +IRL D F+ + L++E +L +I G + E+ AR F Q+ +
Sbjct: 68 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 127
Query: 81 ILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVL 140
++ ++HRD+K ENIL+ + LK+ DFG L Y + G+ +Y PE +
Sbjct: 128 HCHNCGVLHRDIKDENILIDLNRGE--LKLIDFGSGALLKDTVYTD-FDGTRVYSPPEWI 184
Query: 141 QFQRYDEK-VDMWSVGAILFELLNGYPPFSGRNNV----QLIVPALHPDCVDMCLKLLSA 195
++ RY + +WS+G +L++++ G PF + + +C + L+
Sbjct: 185 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLAL 244
Query: 196 NTVDRLSFNEFYHHRFLR 213
DR +F E +H +++
Sbjct: 245 RPSDRPTFEEIQNHPWMQ 262
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 93/198 (46%), Gaps = 9/198 (4%)
Query: 22 SVNHPNIIRLFDAFQAENCIFLVVEFCAG-GNLSSYIRLHGRVPEQTARKFLQQLGAGLE 80
S +IRL D F+ + L++E +L +I G + E+ AR F Q+ +
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 129
Query: 81 ILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVL 140
++ ++HRD+K ENIL+ + LK+ DFG L Y + G+ +Y PE +
Sbjct: 130 HCHNCGVLHRDIKDENILIDLNRGE--LKLIDFGSGALLKDTVYTD-FDGTRVYSPPEWI 186
Query: 141 QFQRY-DEKVDMWSVGAILFELLNGYPPFSGRNNV----QLIVPALHPDCVDMCLKLLSA 195
++ RY +WS+G +L++++ G PF + + +C + L+
Sbjct: 187 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLAL 246
Query: 196 NTVDRLSFNEFYHHRFLR 213
DR +F E +H +++
Sbjct: 247 RPSDRPTFEEIQNHPWMQ 264
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 93/193 (48%), Gaps = 9/193 (4%)
Query: 27 NIIRLFDAFQAENCIFLVVEFCAG-GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSH 85
+IRL D F+ + L++E +L +I G + E+ AR F Q+ + ++
Sbjct: 103 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 162
Query: 86 HIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVLQFQRY 145
++HRD+K ENIL+ + LK+ DFG L Y + G+ +Y PE +++ RY
Sbjct: 163 GVLHRDIKDENILIDLNRGE--LKLIDFGSGALLKDTVYTD-FDGTRVYSPPEWIRYHRY 219
Query: 146 DEK-VDMWSVGAILFELLNGYPPFSGRNNV----QLIVPALHPDCVDMCLKLLSANTVDR 200
+ +WS+G +L++++ G PF + + +C + L+ DR
Sbjct: 220 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHLIRWCLALRPSDR 279
Query: 201 LSFNEFYHHRFLR 213
+F E +H +++
Sbjct: 280 PTFEEIQNHPWMQ 292
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 94/198 (47%), Gaps = 9/198 (4%)
Query: 22 SVNHPNIIRLFDAFQAENCIFLVVEFCAG-GNLSSYIRLHGRVPEQTARKFLQQLGAGLE 80
S +IRL D F+ + L++E +L +I G + E+ AR F Q+ +
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 124
Query: 81 ILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVL 140
++ ++HRD+K ENIL+ + LK+ DFG L Y + G+ +Y PE +
Sbjct: 125 HCHNCGVLHRDIKDENILIDLNRGE--LKLIDFGSGALLKDTVYTD-FDGTRVYSPPEWI 181
Query: 141 QFQRYDEK-VDMWSVGAILFELLNGYPPFSGRNNV----QLIVPALHPDCVDMCLKLLSA 195
++ RY + +WS+G +L++++ G PF + + +C + L+
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHLIRWCLAL 241
Query: 196 NTVDRLSFNEFYHHRFLR 213
DR +F E +H +++
Sbjct: 242 RPSDRPTFEEIQNHPWMQ 259
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 94/198 (47%), Gaps = 9/198 (4%)
Query: 22 SVNHPNIIRLFDAFQAENCIFLVVEFCAG-GNLSSYIRLHGRVPEQTARKFLQQLGAGLE 80
S +IRL D F+ + L++E +L +I G + E+ AR F Q+ +
Sbjct: 69 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 128
Query: 81 ILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVL 140
++ ++HRD+K ENIL+ + LK+ DFG L Y + G+ +Y PE +
Sbjct: 129 HCHNCGVLHRDIKDENILIDLNRGE--LKLIDFGSGALLKDTVYTD-FDGTRVYSPPEWI 185
Query: 141 QFQRYDEK-VDMWSVGAILFELLNGYPPFSGRNNV----QLIVPALHPDCVDMCLKLLSA 195
++ RY + +WS+G +L++++ G PF + + +C + L+
Sbjct: 186 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLAL 245
Query: 196 NTVDRLSFNEFYHHRFLR 213
DR +F E +H +++
Sbjct: 246 RPSDRPTFEEIQNHPWMQ 263
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 93/193 (48%), Gaps = 9/193 (4%)
Query: 27 NIIRLFDAFQAENCIFLVVEFCAG-GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSH 85
+IRL D F+ + L++E +L +I G + E+ AR F Q+ + ++
Sbjct: 89 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 148
Query: 86 HIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVLQFQRY 145
++HRD+K ENIL+ + LK+ DFG L Y + G+ +Y PE +++ RY
Sbjct: 149 GVLHRDIKDENILIDL--NRGELKLIDFGSGALLKDTVYTD-FDGTRVYSPPEWIRYHRY 205
Query: 146 DEK-VDMWSVGAILFELLNGYPPFSGRNNV----QLIVPALHPDCVDMCLKLLSANTVDR 200
+ +WS+G +L++++ G PF + + +C + L+ DR
Sbjct: 206 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSDR 265
Query: 201 LSFNEFYHHRFLR 213
+F E +H +++
Sbjct: 266 PTFEEIQNHPWMQ 278
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 94/198 (47%), Gaps = 9/198 (4%)
Query: 22 SVNHPNIIRLFDAFQAENCIFLVVEFCAG-GNLSSYIRLHGRVPEQTARKFLQQLGAGLE 80
S +IRL D F+ + L++E +L +I G + E+ AR F Q+ +
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 129
Query: 81 ILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVL 140
++ ++HRD+K ENIL+ + LK+ DFG L Y + G+ +Y PE +
Sbjct: 130 HCHNCGVLHRDIKDENILIDLNRGE--LKLIDFGSGALLKDTVYTD-FDGTRVYSPPEWI 186
Query: 141 QFQRYDEK-VDMWSVGAILFELLNGYPPFSGRNNV----QLIVPALHPDCVDMCLKLLSA 195
++ RY + +WS+G +L++++ G PF + + +C + L+
Sbjct: 187 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLAL 246
Query: 196 NTVDRLSFNEFYHHRFLR 213
DR +F E +H +++
Sbjct: 247 RPSDRPTFEEIQNHPWMQ 264
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 88/169 (52%), Gaps = 13/169 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHG----RVPEQTARKF 71
E + + H +++L+ A +E I++V E+ G+L +++ R+P+
Sbjct: 60 EAQVMKKLRHEKLVQLY-AVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLV--DM 116
Query: 72 LQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY-AEKVCG 130
Q+ +G+ + + +HRDL+ NIL+ ++++ K+ADFGL+ + Y A +
Sbjct: 117 SAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLARLIEDNEYTARQGAK 173
Query: 131 SPL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
P+ + APE + R+ K D+WS G +L EL G P+ G N +++
Sbjct: 174 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 222
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 93/193 (48%), Gaps = 9/193 (4%)
Query: 27 NIIRLFDAFQAENCIFLVVEFCAG-GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSH 85
+IRL D F+ + L++E +L +I G + E+ AR F Q+ + ++
Sbjct: 102 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 161
Query: 86 HIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVLQFQRY 145
++HRD+K ENIL+ + LK+ DFG L Y + G+ +Y PE +++ RY
Sbjct: 162 GVLHRDIKDENILIDLNRGE--LKLIDFGSGALLKDTVYTD-FDGTRVYSPPEWIRYHRY 218
Query: 146 DEK-VDMWSVGAILFELLNGYPPFSGRNNV----QLIVPALHPDCVDMCLKLLSANTVDR 200
+ +WS+G +L++++ G PF + + +C + L+ DR
Sbjct: 219 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXECQHLIRWCLALRPSDR 278
Query: 201 LSFNEFYHHRFLR 213
+F E +H +++
Sbjct: 279 PTFEEIQNHPWMQ 291
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 94/198 (47%), Gaps = 9/198 (4%)
Query: 22 SVNHPNIIRLFDAFQAENCIFLVVEFCAG-GNLSSYIRLHGRVPEQTARKFLQQLGAGLE 80
S +IRL D F+ + L++E +L +I G + E+ AR F Q+ +
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 124
Query: 81 ILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVL 140
++ ++HRD+K ENIL+ + LK+ DFG L Y + G+ +Y PE +
Sbjct: 125 HCHNCGVLHRDIKDENILIDLNRGE--LKLIDFGSGALLKDTVYTD-FDGTRVYSPPEWI 181
Query: 141 QFQRYDEK-VDMWSVGAILFELLNGYPPFSGRNNV----QLIVPALHPDCVDMCLKLLSA 195
++ RY + +WS+G +L++++ G PF + + +C + L+
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLAL 241
Query: 196 NTVDRLSFNEFYHHRFLR 213
DR +F E +H +++
Sbjct: 242 RPSDRPTFEEIQNHPWMQ 259
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 93/193 (48%), Gaps = 9/193 (4%)
Query: 27 NIIRLFDAFQAENCIFLVVEFCAG-GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSH 85
+IRL D F+ + L++E +L +I G + E+ AR F Q+ + ++
Sbjct: 103 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 162
Query: 86 HIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVLQFQRY 145
++HRD+K ENIL+ + LK+ DFG L Y + G+ +Y PE +++ RY
Sbjct: 163 GVLHRDIKDENILIDLNRGE--LKLIDFGSGALLKDTVYTD-FDGTRVYSPPEWIRYHRY 219
Query: 146 DEK-VDMWSVGAILFELLNGYPPFSGRNNV----QLIVPALHPDCVDMCLKLLSANTVDR 200
+ +WS+G +L++++ G PF + + +C + L+ DR
Sbjct: 220 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXECQHLIRWCLALRPSDR 279
Query: 201 LSFNEFYHHRFLR 213
+F E +H +++
Sbjct: 280 PTFEEIQNHPWMQ 292
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 66.6 bits (161), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 82/164 (50%), Gaps = 11/164 (6%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDA--FQAENCIFLVVEFCAGGNLSSYIRLHG-RV 63
+HL+ + E+ L S+ H NI++ + L++E+ G+L Y++ H R+
Sbjct: 54 EHLRD-FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI 112
Query: 64 PEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN 123
++ Q+ G+E L + IHR+L NIL+ +++ +KI DFGL+ L
Sbjct: 113 DHIKLLQYTSQICKGMEYLGTKRYIHRNLATRNILV---ENENRVKIGDFGLTKVLPQDK 169
Query: 124 YAEKV---CGSPL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN 163
KV SP+ + APE L ++ D+WS G +L+EL
Sbjct: 170 EYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 66.6 bits (161), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 92/193 (47%), Gaps = 9/193 (4%)
Query: 27 NIIRLFDAFQAENCIFLVVEFCAG-GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSH 85
+IRL D F+ + L++E +L +I G + E+ AR F Q+ + ++
Sbjct: 90 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 149
Query: 86 HIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVLQFQRY 145
++HRD+K ENIL+ + LK+ DFG L Y + G+ +Y PE +++ RY
Sbjct: 150 GVLHRDIKDENILIDLNRGE--LKLIDFGSGALLKDTVYTD-FDGTRVYSPPEWIRYHRY 206
Query: 146 -DEKVDMWSVGAILFELLNGYPPFSGRNNV----QLIVPALHPDCVDMCLKLLSANTVDR 200
+WS+G +L++++ G PF + + +C + L+ DR
Sbjct: 207 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSDR 266
Query: 201 LSFNEFYHHRFLR 213
+F E +H +++
Sbjct: 267 PTFEEIQNHPWMQ 279
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 66.6 bits (161), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 93/193 (48%), Gaps = 9/193 (4%)
Query: 27 NIIRLFDAFQAENCIFLVVEFCAG-GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSH 85
+IRL D F+ + L++E +L +I G + E+ AR F Q+ + ++
Sbjct: 103 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 162
Query: 86 HIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVLQFQRY 145
++HRD+K ENIL+ + LK+ DFG L Y + G+ +Y PE +++ RY
Sbjct: 163 GVLHRDIKDENILIDLNRGE--LKLIDFGSGALLKDTVYTD-FDGTRVYSPPEWIRYHRY 219
Query: 146 DEK-VDMWSVGAILFELLNGYPPFSGRNNV----QLIVPALHPDCVDMCLKLLSANTVDR 200
+ +WS+G +L++++ G PF + + +C + L+ DR
Sbjct: 220 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXECQHLIRWCLALRPSDR 279
Query: 201 LSFNEFYHHRFLR 213
+F E +H +++
Sbjct: 280 PTFEEIQNHPWMQ 292
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 66.6 bits (161), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 90/169 (53%), Gaps = 13/169 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIR----LHGRVPEQTARKF 71
E + + H +++L+ A +E I++V+E+ + G L +++ + R+P+
Sbjct: 63 EAQVMKKLRHEKLVQLY-AVVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLV--DM 119
Query: 72 LQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY-AEKVCG 130
Q+ +G+ + + +HRDL+ NIL+ ++++ K+ADFGL+ + Y A +
Sbjct: 120 AAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLARLIEDNEYTARQGAK 176
Query: 131 SPL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
P+ + APE + R+ K D+WS G +L EL G P+ G N +++
Sbjct: 177 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 225
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 66.6 bits (161), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 93/193 (48%), Gaps = 9/193 (4%)
Query: 27 NIIRLFDAFQAENCIFLVVEFCAG-GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSH 85
+IRL D F+ + L++E +L +I G + E+ AR F Q+ + ++
Sbjct: 90 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 149
Query: 86 HIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVLQFQRY 145
++HRD+K ENIL+ + LK+ DFG L Y + G+ +Y PE +++ RY
Sbjct: 150 GVLHRDIKDENILIDLNRGE--LKLIDFGSGALLKDTVYTD-FDGTRVYSPPEWIRYHRY 206
Query: 146 DEK-VDMWSVGAILFELLNGYPPFSGRNNV----QLIVPALHPDCVDMCLKLLSANTVDR 200
+ +WS+G +L++++ G PF + + +C + L+ DR
Sbjct: 207 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCLALRPXDR 266
Query: 201 LSFNEFYHHRFLR 213
+F E +H +++
Sbjct: 267 PTFEEIQNHPWMQ 279
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 66.6 bits (161), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 93/193 (48%), Gaps = 9/193 (4%)
Query: 27 NIIRLFDAFQAENCIFLVVEFCAG-GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSH 85
+IRL D F+ + L++E +L +I G + E+ AR F Q+ + ++
Sbjct: 117 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 176
Query: 86 HIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVLQFQRY 145
++HRD+K ENIL+ + LK+ DFG L Y + G+ +Y PE +++ RY
Sbjct: 177 GVLHRDIKDENILIDLNRGE--LKLIDFGSGALLKDTVYTD-FDGTRVYSPPEWIRYHRY 233
Query: 146 DEK-VDMWSVGAILFELLNGYPPFSGRNNV----QLIVPALHPDCVDMCLKLLSANTVDR 200
+ +WS+G +L++++ G PF + + +C + L+ DR
Sbjct: 234 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCLALRPSDR 293
Query: 201 LSFNEFYHHRFLR 213
+F E +H +++
Sbjct: 294 PTFEEIQNHPWMQ 306
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 66.6 bits (161), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 89/169 (52%), Gaps = 13/169 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIR----LHGRVPEQTARKF 71
E + + H +++L+ A +E I++V E+ + G L +++ + R+P+
Sbjct: 63 EAQVMKKLRHEKLVQLY-AVVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLV--DM 119
Query: 72 LQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY-AEKVCG 130
Q+ +G+ + + +HRDL+ NIL+ ++++ K+ADFGL+ + Y A +
Sbjct: 120 AAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLARLIEDNEYTARQGAK 176
Query: 131 SPL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
P+ + APE + R+ K D+WS G +L EL G P+ G N +++
Sbjct: 177 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 225
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 93/193 (48%), Gaps = 9/193 (4%)
Query: 27 NIIRLFDAFQAENCIFLVVEFCAG-GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSH 85
+IRL D F+ + L++E +L +I G + E+ AR F Q+ + ++
Sbjct: 109 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 168
Query: 86 HIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVLQFQRY 145
++HRD+K ENIL+ + LK+ DFG L Y + G+ +Y PE +++ RY
Sbjct: 169 GVLHRDIKDENILIDLNRGE--LKLIDFGSGALLKDTVYTD-FDGTRVYSPPEWIRYHRY 225
Query: 146 DEK-VDMWSVGAILFELLNGYPPFSGRNNV----QLIVPALHPDCVDMCLKLLSANTVDR 200
+ +WS+G +L++++ G PF + + +C + L+ DR
Sbjct: 226 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSDR 285
Query: 201 LSFNEFYHHRFLR 213
+F E +H +++
Sbjct: 286 PTFEEIQNHPWMQ 298
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 93/193 (48%), Gaps = 9/193 (4%)
Query: 27 NIIRLFDAFQAENCIFLVVEFCAG-GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSH 85
+IRL D F+ + L++E +L +I G + E+ AR F Q+ + ++
Sbjct: 90 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 149
Query: 86 HIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVLQFQRY 145
++HRD+K ENIL+ + LK+ DFG L Y + G+ +Y PE +++ RY
Sbjct: 150 GVLHRDIKDENILIDL--NRGELKLIDFGSGALLKDTVYTD-FDGTRVYSPPEWIRYHRY 206
Query: 146 DEK-VDMWSVGAILFELLNGYPPFSGRNNV----QLIVPALHPDCVDMCLKLLSANTVDR 200
+ +WS+G +L++++ G PF + + +C + L+ DR
Sbjct: 207 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCLALRPSDR 266
Query: 201 LSFNEFYHHRFLR 213
+F E +H +++
Sbjct: 267 PTFEEIQNHPWMQ 279
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 93/193 (48%), Gaps = 9/193 (4%)
Query: 27 NIIRLFDAFQAENCIFLVVEFCAG-GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSH 85
+IRL D F+ + L++E +L +I G + E+ AR F Q+ + ++
Sbjct: 89 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 148
Query: 86 HIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVLQFQRY 145
++HRD+K ENIL+ + LK+ DFG L Y + G+ +Y PE +++ RY
Sbjct: 149 GVLHRDIKDENILIDLNRGE--LKLIDFGSGALLKDTVYTD-FDGTRVYSPPEWIRYHRY 205
Query: 146 DEK-VDMWSVGAILFELLNGYPPFSGRNNV----QLIVPALHPDCVDMCLKLLSANTVDR 200
+ +WS+G +L++++ G PF + + +C + L+ DR
Sbjct: 206 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCLALRPSDR 265
Query: 201 LSFNEFYHHRFLR 213
+F E +H +++
Sbjct: 266 PTFEEIQNHPWMQ 278
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 93/193 (48%), Gaps = 9/193 (4%)
Query: 27 NIIRLFDAFQAENCIFLVVEFCAG-GNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSH 85
+IRL D F+ + L++E +L +I G + E+ AR F Q+ + ++
Sbjct: 122 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 181
Query: 86 HIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVLQFQRY 145
++HRD+K ENIL+ + LK+ DFG L Y + G+ +Y PE +++ RY
Sbjct: 182 GVLHRDIKDENILIDLNRGE--LKLIDFGSGALLKDTVYTD-FDGTRVYSPPEWIRYHRY 238
Query: 146 DEK-VDMWSVGAILFELLNGYPPFSGRNNV----QLIVPALHPDCVDMCLKLLSANTVDR 200
+ +WS+G +L++++ G PF + + +C + L+ DR
Sbjct: 239 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCLALRPSDR 298
Query: 201 LSFNEFYHHRFLR 213
+F E +H +++
Sbjct: 299 PTFEEIQNHPWMQ 311
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 93/198 (46%), Gaps = 9/198 (4%)
Query: 22 SVNHPNIIRLFDAFQAENCIFLVVEFCAG-GNLSSYIRLHGRVPEQTARKFLQQLGAGLE 80
S +IRL D F+ + L++E +L +I G + E+ AR F Q+ +
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 129
Query: 81 ILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVL 140
++ ++HRD+K ENIL+ + LK+ DFG L Y + G+ +Y PE +
Sbjct: 130 HCHNCGVLHRDIKDENILIDLNRGE--LKLIDFGSGALLKDTVYTD-FDGTRVYSPPEWI 186
Query: 141 QFQRY-DEKVDMWSVGAILFELLNGYPPFSGRNNV----QLIVPALHPDCVDMCLKLLSA 195
++ RY +WS+G +L++++ G PF + + +C + L+
Sbjct: 187 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLAL 246
Query: 196 NTVDRLSFNEFYHHRFLR 213
DR +F E +H +++
Sbjct: 247 RPSDRPTFEEIQNHPWMQ 264
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 89/170 (52%), Gaps = 15/170 (8%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIR----LHGRVPEQTARKF 71
E + + H +++L+ A +E I++V+E+ + G+L +++ + R+P+
Sbjct: 63 EAQVMKKLRHEKLVQLY-AVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLV--DM 119
Query: 72 LQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGS 131
Q+ +G+ + + +HRDL+ NIL+ ++++ K+ADFGL+ L N G+
Sbjct: 120 AAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLA-RLIEDNEXTARQGA 175
Query: 132 PL---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
+ APE + R+ K D+WS G +L EL G P+ G N +++
Sbjct: 176 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 225
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 94/198 (47%), Gaps = 9/198 (4%)
Query: 22 SVNHPNIIRLFDAFQAENCIFLVVEFCAG-GNLSSYIRLHGRVPEQTARKFLQQLGAGLE 80
S +IRL D F+ + L++E +L +I G + E+ AR F Q+ +
Sbjct: 92 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 151
Query: 81 ILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVL 140
++ ++HRD+K ENIL+ + LK+ DFG L Y + G+ +Y PE +
Sbjct: 152 HCHNCGVLHRDIKDENILIDLNRGE--LKLIDFGSGALLKDTVYTD-FDGTRVYSPPEWI 208
Query: 141 QFQRYDEK-VDMWSVGAILFELLNGYPPFSGRNNV----QLIVPALHPDCVDMCLKLLSA 195
++ RY + +WS+G +L++++ G PF + + +C + L+
Sbjct: 209 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCLAL 268
Query: 196 NTVDRLSFNEFYHHRFLR 213
DR +F E +H +++
Sbjct: 269 RPSDRPTFEEIQNHPWMQ 286
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 105/231 (45%), Gaps = 34/231 (14%)
Query: 11 SCLDCELNFL-SSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH-----GRVP 64
S D E+ L S HPN+IR F + ++ +E CA L Y+ G P
Sbjct: 62 SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCAA-TLQEYVEQKDFAHLGLEP 120
Query: 65 EQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLK--IADFGLSCTLYPG 122
LQQ +GL L+S +I+HRDLKP NIL+S + +K I+DFGL L G
Sbjct: 121 ----ITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVG 176
Query: 123 NYA----EKVCGSPLYMAPEVLQ---FQRYDEKVDMWSVGAILFELLN-GYPPFS----- 169
++ V G+ ++APE+L + VD++S G + + +++ G PF
Sbjct: 177 RHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR 236
Query: 170 ------GRNNVQLIVPALHPDCV--DMCLKLLSANTVDRLSFNEFYHHRFL 212
G ++ + P H D + ++ K+++ + R S H F
Sbjct: 237 QANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFF 287
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 74/163 (45%), Gaps = 7/163 (4%)
Query: 24 NHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHG-RVPEQTARKFLQQLGAGLEIL 82
HP +RL A++ ++L E C G +L + G +PE +L+ L L
Sbjct: 115 QHPCCVRLEQAWEEGGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHL 173
Query: 83 NSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVLQF 142
+S ++H D+KP NI L K+ DFGL L E G P YMAPE+LQ
Sbjct: 174 HSQGLVHLDVKPANIFLG---PRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQG 230
Query: 143 QRYDEKVDMWSVGAILFELL-NGYPPFSGRNNVQLIVPALHPD 184
Y D++S+G + E+ N P G QL L P+
Sbjct: 231 S-YGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLPPE 272
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 10/184 (5%)
Query: 1 MLKKLNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH 60
M+ + LK D E+ + H N++ L + + LV + G+L +
Sbjct: 56 MVDITTEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCL 115
Query: 61 GRVPEQTAR---KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGL-- 115
P + K Q G+ L+ +H IHRD+K NIL LD+ KI+DFGL
Sbjct: 116 DGTPPLSWHXRCKIAQGAANGINFLHENHHIHRDIKSANIL---LDEAFTAKISDFGLAR 172
Query: 116 -SCTLYPGNYAEKVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
S ++ G+ Y APE L+ + K D++S G +L E++ G P
Sbjct: 173 ASEKFAQXVXXSRIVGTTAYXAPEALRGE-ITPKSDIYSFGVVLLEIITGLPAVDEHREP 231
Query: 175 QLIV 178
QL++
Sbjct: 232 QLLL 235
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 76/164 (46%), Gaps = 12/164 (7%)
Query: 20 LSSVNHPNIIRLFDAFQAENCIFLVVEFCAGG--NLSSYIR--LHGRVPEQTARKFLQQL 75
+ S + P I++ + A E ++ +E + Y+ L +PE+ K
Sbjct: 75 MRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLAT 134
Query: 76 GAGLEILNSH-HIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLY 134
L L + IIHRD+KP NILL D +K+ DFG+S L + G Y
Sbjct: 135 VKALNHLKENLKIIHRDIKPSNILL---DRSGNIKLCDFGISGQLVDSIAKTRDAGCRPY 191
Query: 135 MAPEVL----QFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
MAPE + Q YD + D+WS+G L+EL G P+ N+V
Sbjct: 192 MAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSV 235
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 92/196 (46%), Gaps = 38/196 (19%)
Query: 2 LKKLNKHLKSCLDC-----ELNFLSSVNHPNIIRLFDAFQAENCI-----FLVVEFCAGG 51
+KK+N+ + +DC E+ L+ + IIRL+D ++ + ++V+E A
Sbjct: 56 IKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEI-ADS 114
Query: 52 NLSSYIRLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIA 111
+L + + E+ + L L G ++ IIHRDLKP N L L+ D +K+
Sbjct: 115 DLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCL---LNQDCSVKVC 171
Query: 112 DFGLSCTL----------------YPG----NYAEKVCG---SPLYMAPEVLQFQR-YDE 147
DFGL+ T+ PG N +++ + Y APE++ Q Y +
Sbjct: 172 DFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTK 231
Query: 148 KVDMWSVGAILFELLN 163
+D+WS G I ELLN
Sbjct: 232 SIDIWSTGCIFAELLN 247
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 87/172 (50%), Gaps = 32/172 (18%)
Query: 25 HPNIIRLFDAFQAENC--IFLVVEFCAGGNLSSYIRLHGRVPEQTARKFL-QQLGAGLEI 81
H NI+ L + +A+N ++LV ++ +L + IR + E ++++ QL ++
Sbjct: 68 HENIVNLLNVLRADNDRDVYLVFDYMET-DLHAVIR--ANILEPVHKQYVVYQLIKVIKY 124
Query: 82 LNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLY---------PGNYAEKV---- 128
L+S ++HRD+KP NILL+ + +K+ADFGLS + P + E
Sbjct: 125 LHSGGLLHRDMKPSNILLNA---ECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFD 181
Query: 129 ---------CGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSG 170
+ Y APE+ L +Y + +DMWS+G IL E+L G P F G
Sbjct: 182 DDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPG 233
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 88/191 (46%), Gaps = 13/191 (6%)
Query: 2 LKKLNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH- 60
L+ + + + L EL+ NHPNI+ F A+N +++V F A G+ I H
Sbjct: 46 LEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHF 105
Query: 61 -GRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL 119
+ E LQ + L+ ++ +HR +K +IL+S +D V L LS
Sbjct: 106 MDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILIS-VDGKVYLSGLRSNLSMIS 164
Query: 120 YPGNYAEKVCGSPLY-------MAPEVLQ--FQRYDEKVDMWSVGAILFELLNGYPPFSG 170
+ G V P Y ++PEVLQ Q YD K D++SVG EL NG+ PF
Sbjct: 165 H-GQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKD 223
Query: 171 RNNVQLIVPAL 181
Q+++ L
Sbjct: 224 MPATQMLLEKL 234
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 88/169 (52%), Gaps = 13/169 (7%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHG----RVPEQTARKF 71
E + + H +++L+ A +E I++V E+ G+L +++ R+P+
Sbjct: 60 EAQVMKKLRHEKLVQLY-AVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLV--DM 116
Query: 72 LQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNY-AEKVCG 130
Q+ +G+ + + +HRDL+ NIL+ ++++ K+ADFGL+ + + A +
Sbjct: 117 SAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLARLIEDNEWTARQGAK 173
Query: 131 SPL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
P+ + APE + R+ K D+WS G +L EL G P+ G N +++
Sbjct: 174 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 222
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 88/191 (46%), Gaps = 13/191 (6%)
Query: 2 LKKLNKHLKSCLDCELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH- 60
L+ + + + L EL+ NHPNI+ F A+N +++V F A G+ I H
Sbjct: 62 LEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHF 121
Query: 61 -GRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL 119
+ E LQ + L+ ++ +HR +K +IL+S +D V L LS
Sbjct: 122 MDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILIS-VDGKVYLSGLRSNLSMIS 180
Query: 120 YPGNYAEKVCGSPLY-------MAPEVLQ--FQRYDEKVDMWSVGAILFELLNGYPPFSG 170
+ G V P Y ++PEVLQ Q YD K D++SVG EL NG+ PF
Sbjct: 181 H-GQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKD 239
Query: 171 RNNVQLIVPAL 181
Q+++ L
Sbjct: 240 MPATQMLLEKL 250
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 81/168 (48%), Gaps = 15/168 (8%)
Query: 20 LSSVNHPNIIRLFDAF-----QAENCIFL--VVEFCAGG---NLSSYIRLHGRVPEQTAR 69
L+ ++HPNI++L F + I+L V+E+ +Y R P +
Sbjct: 73 LAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIK 132
Query: 70 KFLQQL--GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEK 127
FL QL G L S ++ HRD+KP N+L++ + D LK+ DFG + L P
Sbjct: 133 VFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVN--EADGTLKLCDFGSAKKLSPSEPNVA 190
Query: 128 VCGSPLYMAPE-VLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNV 174
S Y APE + Q Y VD+WSVG I E++ G P F G N+
Sbjct: 191 YICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSA 238
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 83/175 (47%), Gaps = 24/175 (13%)
Query: 16 ELNFLSSVNHPNIIRLF-----DAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARK 70
E+ L H NII +F D+F+ N ++++ E +L I + + +
Sbjct: 59 EIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQT-DLHRVISTQ-MLSDDHIQY 116
Query: 71 FLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLS------------CT 118
F+ Q +++L+ ++IHRDLKP N+L++ D LK+ DFGL+ T
Sbjct: 117 FIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCD---LKVCDFGLARIIDESAADNSEPT 173
Query: 119 LYPGNYAEKVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRN 172
E V + Y APEV L +Y +D+WS G IL EL P F GR+
Sbjct: 174 GQQSGMTEXV-ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRD 227
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 92/201 (45%), Gaps = 28/201 (13%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQ--------- 66
E + + N +++RL +++E G+L SY+R PE
Sbjct: 63 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR--SLRPEMENNPVLAPP 120
Query: 67 TARKFLQQLGA---GLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN 123
+ K +Q G G+ LN++ +HRDL N +++ +D +KI DFG++ + +
Sbjct: 121 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA---EDFTVKIGDFGMTRDIXETD 177
Query: 124 YAEKVCGSPL---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIVP 179
K L +M+PE L+ + D+WS G +L+E+ P+ G +N Q++
Sbjct: 178 XXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF 237
Query: 180 ALH------PD-CVDMCLKLL 193
+ PD C DM L+L+
Sbjct: 238 VMEGGLLDKPDNCPDMLLELM 258
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 79/169 (46%), Gaps = 8/169 (4%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL 75
E + P+++ + D + + +++ G +L++ +R G + A ++Q+
Sbjct: 84 EARTAGRLQEPHVVPIHDFGEIDGQLYVDXRLINGVDLAAXLRRQGPLAPPRAVAIVRQI 143
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE--KVCGSPL 133
G+ L+ ++ HRD+KPENIL+S D + DFG++ + G+
Sbjct: 144 GSALDAAHAAGATHRDVKPENILVSA---DDFAYLVDFGIASATTDEKLTQLGNTVGTLY 200
Query: 134 YMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFSGRNNVQLIVPALH 182
Y APE + D++++ +L+E L G PP+ G QL V H
Sbjct: 201 YXAPERFSESHATYRADIYALTCVLYECLTGSPPYQGD---QLSVXGAH 246
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 85/174 (48%), Gaps = 22/174 (12%)
Query: 16 ELNFLSSVNHPNIIRLF-----DAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARK 70
E+ L H NII +F D+F+ N ++++ E +L I + + +
Sbjct: 59 EIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQT-DLHRVISTQ-MLSDDHIQY 116
Query: 71 FLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL--YPGNYAE-- 126
F+ Q +++L+ ++IHRDLKP N+L++ D LK+ DFGL+ + + +E
Sbjct: 117 FIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCD---LKVCDFGLARIIDESAADNSEPT 173
Query: 127 -------KVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRN 172
+ + Y APEV L +Y +D+WS G IL EL P F GR+
Sbjct: 174 GQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRD 227
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 84/179 (46%), Gaps = 32/179 (17%)
Query: 16 ELNFLSSVNHPNIIRLF-----DAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQT--- 67
E+ L H NII +F D+F+ N ++++ E LH + Q
Sbjct: 59 EIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTD-------LHRVISTQMLSD 111
Query: 68 --ARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL--YPGN 123
+ F+ Q +++L+ ++IHRDLKP N+L++ D LK+ DFGL+ + +
Sbjct: 112 DHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCD---LKVCDFGLARIIDESAAD 168
Query: 124 YAE---------KVCGSPLYMAPEV-LQFQRYDEKVDMWSVGAILFELLNGYPPFSGRN 172
+E + + Y APEV L +Y +D+WS G IL EL P F GR+
Sbjct: 169 NSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRD 227
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 78/152 (51%), Gaps = 14/152 (9%)
Query: 20 LSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL---- 75
LS HP+++ L N + L+ ++ GNL + L+G + + Q+L
Sbjct: 89 LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRH--LYGSDLPTMSMSWEQRLEICI 146
Query: 76 GA--GLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLS---CTLYPGNYAEKVCG 130
GA GL L++ IIHRD+K NILL D++ + KI DFG+S L + V G
Sbjct: 147 GAARGLHYLHTRAIIHRDVKSINILL---DENFVPKITDFGISKKGTELGQTHLXXVVKG 203
Query: 131 SPLYMAPEVLQFQRYDEKVDMWSVGAILFELL 162
+ Y+ PE R EK D++S G +LFE+L
Sbjct: 204 TLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVL 235
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 93/200 (46%), Gaps = 29/200 (14%)
Query: 10 KSCLDCELNFLSSV-NHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGR--VPEQ 66
K L EL +S + H NI+ L A + ++ E+C G+L +++R + ++
Sbjct: 93 KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKE 152
Query: 67 TAR--------KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCT 118
R F Q+ G+ L S + IHRD+ N+LL+ + + KI DFGL+
Sbjct: 153 DGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLT---NGHVAKIGDFGLARD 209
Query: 119 LY-PGNYAEKVCGS-PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSG---- 170
+ NY K P+ +MAPE + Y + D+WS G +L+E+ + G P+ G
Sbjct: 210 IMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVN 269
Query: 171 -------RNNVQLIVPALHP 183
++ Q+ PA P
Sbjct: 270 SKFYKLVKDGYQMAQPAFAP 289
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 93/200 (46%), Gaps = 29/200 (14%)
Query: 10 KSCLDCELNFLSSV-NHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGR--VPEQ 66
K L EL +S + H NI+ L A + ++ E+C G+L +++R + ++
Sbjct: 85 KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKE 144
Query: 67 TAR--------KFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCT 118
R F Q+ G+ L S + IHRD+ N+LL+ + + KI DFGL+
Sbjct: 145 DGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLT---NGHVAKIGDFGLARD 201
Query: 119 LY-PGNYAEKVCGS-PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSG---- 170
+ NY K P+ +MAPE + Y + D+WS G +L+E+ + G P+ G
Sbjct: 202 IMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVN 261
Query: 171 -------RNNVQLIVPALHP 183
++ Q+ PA P
Sbjct: 262 SKFYKLVKDGYQMAQPAFAP 281
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 80/164 (48%), Gaps = 20/164 (12%)
Query: 24 NHPNIIRL----FDAFQAENCIFLVVEFCAGGNLSSYI-RLHGR---VPEQTARKFLQQL 75
NHPNI+RL A++ +L++ F G L + I RL + + E L +
Sbjct: 84 NHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGI 143
Query: 76 GAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPG--------NYAEK 127
GLE +++ HRDLKP NILL V++ + +C G ++A +
Sbjct: 144 CRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQ 203
Query: 128 VCGSPLYMAPEVLQFQRY---DEKVDMWSVGAILFELLNGYPPF 168
C + Y APE+ Q + DE+ D+WS+G +L+ ++ G P+
Sbjct: 204 RC-TISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPY 246
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 78/152 (51%), Gaps = 14/152 (9%)
Query: 20 LSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQL---- 75
LS HP+++ L N + L+ ++ GNL + L+G + + Q+L
Sbjct: 89 LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRH--LYGSDLPTMSMSWEQRLEICI 146
Query: 76 GA--GLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLS---CTLYPGNYAEKVCG 130
GA GL L++ IIHRD+K NILL D++ + KI DFG+S L + V G
Sbjct: 147 GAARGLHYLHTRAIIHRDVKSINILL---DENFVPKITDFGISKKGTELDQTHLXXVVKG 203
Query: 131 SPLYMAPEVLQFQRYDEKVDMWSVGAILFELL 162
+ Y+ PE R EK D++S G +LFE+L
Sbjct: 204 TLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVL 235
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 86/170 (50%), Gaps = 15/170 (8%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHG----RVPEQTARKF 71
E + + H +++L+ A +E I +V E+ + G+L +++ R+P+
Sbjct: 53 EAQVMKKLRHEKLVQLY-AVVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLV--DM 109
Query: 72 LQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGS 131
Q+ +G+ + + +HRDL+ NIL+ ++++ K+ADFGL+ L N G+
Sbjct: 110 AAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLA-RLIEDNEXTARQGA 165
Query: 132 PL---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLI 177
+ APE + R+ K D+WS G +L EL G P+ G N +++
Sbjct: 166 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 215
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 92/199 (46%), Gaps = 32/199 (16%)
Query: 1 MLK-KLNKHLKSCLDCELNFLSSV-NHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIR 58
MLK K + + L EL ++ + +H NI+ L A I+L+ E+C G+L +Y+R
Sbjct: 82 MLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLR 141
Query: 59 L--------------HGRVPEQTARK---------FLQQLGAGLEILNSHHIIHRDLKPE 95
R+ E+ F Q+ G+E L +HRDL
Sbjct: 142 SKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAAR 201
Query: 96 NILLSGLDDDVMLKIADFGLSCTLYP-GNYAEKVCGS-PL-YMAPEVLQFQRYDEKVDMW 152
N+L++ ++KI DFGL+ + NY + P+ +MAPE L Y K D+W
Sbjct: 202 NVLVT---HGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVW 258
Query: 153 SVGAILFELLN-GYPPFSG 170
S G +L+E+ + G P+ G
Sbjct: 259 SYGILLWEIFSLGVNPYPG 277
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 79/157 (50%), Gaps = 9/157 (5%)
Query: 26 PNIIRLFDAFQ--AENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQLGAGLEILN 83
PNII L D + LV E N + + +L+ + + R ++ ++ L+ +
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHV---NNTDFKQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 84 SHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVL-QF 142
S I+HRD+KP N+L+ + L++ D+GL+ +PG S + PE+L +
Sbjct: 149 SMGIMHRDVKPHNVLIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDY 206
Query: 143 QRYDEKVDMWSVGAILFELL-NGYPPFSGRNNVQLIV 178
Q YD +DMWS+G +L ++ P F G +N +V
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 91/201 (45%), Gaps = 28/201 (13%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQ--------- 66
E + + N +++RL +++E G+L SY+R PE
Sbjct: 72 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR--SLRPEMENNPVLAPP 129
Query: 67 TARKFLQQLGA---GLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGN 123
+ K +Q G G+ LN++ +HRDL N +++ +D +KI DFG++ + +
Sbjct: 130 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA---EDFTVKIGDFGMTRDIXETD 186
Query: 124 YAEKVCGSPL---YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSGRNNVQLIVP 179
K L +M+PE L+ + D+WS G +L+E+ P+ G +N Q++
Sbjct: 187 XXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF 246
Query: 180 ALH------PD-CVDMCLKLL 193
+ PD C DM +L+
Sbjct: 247 VMEGGLLDKPDNCPDMLFELM 267
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 87/174 (50%), Gaps = 10/174 (5%)
Query: 10 KSCLDCELNFLSSVNH-PNIIRLFDAFQ--AENCIFLVVEFCAGGNLSSYIRLHGRVPEQ 66
K+ + E+ L ++ PNII L D + LV E N + + +L+ + +
Sbjct: 75 KNKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHV---NNTDFKQLYQTLTDY 131
Query: 67 TARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAE 126
R ++ ++ L+ +S I+HRD+KP N+++ + L++ D+GL+ +PG
Sbjct: 132 DIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYN 189
Query: 127 KVCGSPLYMAPEVL-QFQRYDEKVDMWSVGAILFELL-NGYPPFSGRNNVQLIV 178
S + PE+L +Q YD +DMWS+G +L ++ P F G +N +V
Sbjct: 190 VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 95/190 (50%), Gaps = 19/190 (10%)
Query: 3 KKLNKHLKSCL-DCELN----------FLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGG 51
+K+N +K+C DC L+ + +++HP+I++L + E ++++E G
Sbjct: 35 EKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEP-TWIIMELYPYG 93
Query: 52 NLSSYI-RLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
L Y+ R + T + Q+ + L S + +HRD+ NIL++ + +K+
Sbjct: 94 ELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPE---CVKL 150
Query: 111 ADFGLSCTLYPGNYAE-KVCGSPL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPP 167
DFGLS + +Y + V P+ +M+PE + F+R+ D+W ++E+L+ G P
Sbjct: 151 GDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP 210
Query: 168 FSGRNNVQLI 177
F N +I
Sbjct: 211 FFWLENKDVI 220
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 79/157 (50%), Gaps = 9/157 (5%)
Query: 26 PNIIRLFDAFQ--AENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQLGAGLEILN 83
PNII L D + LV E N + + +L+ + + R ++ ++ L+ +
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHV---NNTDFKQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 84 SHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVL-QF 142
S I+HRD+KP N+++ + L++ D+GL+ +PG S + PE+L +
Sbjct: 149 SMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDY 206
Query: 143 QRYDEKVDMWSVGAILFELL-NGYPPFSGRNNVQLIV 178
Q YD +DMWS+G +L ++ P F G +N +V
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 79/157 (50%), Gaps = 9/157 (5%)
Query: 26 PNIIRLFDAFQ--AENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQLGAGLEILN 83
PNII L D + LV E N + + +L+ + + R ++ ++ L+ +
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHV---NNTDFKQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 84 SHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVL-QF 142
S I+HRD+KP N+++ + L++ D+GL+ +PG S + PE+L +
Sbjct: 149 SMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDY 206
Query: 143 QRYDEKVDMWSVGAILFELL-NGYPPFSGRNNVQLIV 178
Q YD +DMWS+G +L ++ P F G +N +V
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 79/157 (50%), Gaps = 9/157 (5%)
Query: 26 PNIIRLFDAFQ--AENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQLGAGLEILN 83
PNII L D + LV E N + + +L+ + + R ++ ++ L+ +
Sbjct: 90 PNIITLADIVKDPVSRTPALVFEHV---NNTDFKQLYQTLTDYDIRFYMYEILKALDYCH 146
Query: 84 SHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVL-QF 142
S I+HRD+KP N+++ + L++ D+GL+ +PG S + PE+L +
Sbjct: 147 SMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDY 204
Query: 143 QRYDEKVDMWSVGAILFELL-NGYPPFSGRNNVQLIV 178
Q YD +DMWS+G +L ++ P F G +N +V
Sbjct: 205 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 241
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 79/157 (50%), Gaps = 9/157 (5%)
Query: 26 PNIIRLFDAFQ--AENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQLGAGLEILN 83
PNII L D + LV E N + + +L+ + + R ++ ++ L+ +
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHV---NNTDFKQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 84 SHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVL-QF 142
S I+HRD+KP N+++ + L++ D+GL+ +PG S + PE+L +
Sbjct: 149 SMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDY 206
Query: 143 QRYDEKVDMWSVGAILFELL-NGYPPFSGRNNVQLIV 178
Q YD +DMWS+G +L ++ P F G +N +V
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 79/157 (50%), Gaps = 9/157 (5%)
Query: 26 PNIIRLFDAFQ--AENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQLGAGLEILN 83
PNII L D + LV E N + + +L+ + + R ++ ++ L+ +
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHV---NNTDFKQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 84 SHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVL-QF 142
S I+HRD+KP N+++ + L++ D+GL+ +PG S + PE+L +
Sbjct: 149 SMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDY 206
Query: 143 QRYDEKVDMWSVGAILFELL-NGYPPFSGRNNVQLIV 178
Q YD +DMWS+G +L ++ P F G +N +V
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 37/210 (17%)
Query: 10 KSCLDCELNFLSSV-NHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVP---- 64
K L EL +S + H NI+ L A + ++ E+C G+L +++R R P
Sbjct: 93 KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLR-RKRPPGLEY 151
Query: 65 ---------EQTARK----FLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIA 111
EQ + + F Q+ G+ L S + IHRD+ N+LL+ + + KI
Sbjct: 152 SYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLT---NGHVAKIG 208
Query: 112 DFGLSCTLY-PGNYAEKVCGS-PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPP 167
DFGL+ + NY K P+ +MAPE + Y + D+WS G +L+E+ + G P
Sbjct: 209 DFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP 268
Query: 168 FSG-----------RNNVQLIVPALHPDCV 186
+ G ++ Q+ PA P +
Sbjct: 269 YPGILVNSKFYKLVKDGYQMAQPAFAPKNI 298
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 79/157 (50%), Gaps = 9/157 (5%)
Query: 26 PNIIRLFDAFQ--AENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQLGAGLEILN 83
PNII L D + LV E N + + +L+ + + R ++ ++ L+ +
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHV---NNTDFKQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 84 SHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVL-QF 142
S I+HRD+KP N+++ + L++ D+GL+ +PG S + PE+L +
Sbjct: 149 SMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDY 206
Query: 143 QRYDEKVDMWSVGAILFELL-NGYPPFSGRNNVQLIV 178
Q YD +DMWS+G +L ++ P F G +N +V
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 79/157 (50%), Gaps = 9/157 (5%)
Query: 26 PNIIRLFDAFQ--AENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQLGAGLEILN 83
PNII L D + LV E N + + +L+ + + R ++ ++ L+ +
Sbjct: 91 PNIITLADIVKDPVSRTPALVFEHV---NNTDFKQLYQTLTDYDIRFYMYEILKALDYCH 147
Query: 84 SHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVL-QF 142
S I+HRD+KP N+++ + L++ D+GL+ +PG S + PE+L +
Sbjct: 148 SMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDY 205
Query: 143 QRYDEKVDMWSVGAILFELL-NGYPPFSGRNNVQLIV 178
Q YD +DMWS+G +L ++ P F G +N +V
Sbjct: 206 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 242
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 79/157 (50%), Gaps = 9/157 (5%)
Query: 26 PNIIRLFDAFQ--AENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQLGAGLEILN 83
PNII L D + LV E N + + +L+ + + R ++ ++ L+ +
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHV---NNTDFKQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 84 SHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVL-QF 142
S I+HRD+KP N+++ + L++ D+GL+ +PG S + PE+L +
Sbjct: 149 SMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDY 206
Query: 143 QRYDEKVDMWSVGAILFELL-NGYPPFSGRNNVQLIV 178
Q YD +DMWS+G +L ++ P F G +N +V
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 79/157 (50%), Gaps = 9/157 (5%)
Query: 26 PNIIRLFDAFQ--AENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQLGAGLEILN 83
PNII L D + LV E N + + +L+ + + R ++ ++ L+ +
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHV---NNTDFKQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 84 SHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVL-QF 142
S I+HRD+KP N+++ + L++ D+GL+ +PG S + PE+L +
Sbjct: 149 SMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDY 206
Query: 143 QRYDEKVDMWSVGAILFELL-NGYPPFSGRNNVQLIV 178
Q YD +DMWS+G +L ++ P F G +N +V
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 95/190 (50%), Gaps = 19/190 (10%)
Query: 3 KKLNKHLKSCL-DCELN----------FLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGG 51
+K+N +K+C DC L+ + +++HP+I++L + E ++++E G
Sbjct: 51 EKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEP-TWIIMELYPYG 109
Query: 52 NLSSYI-RLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
L Y+ R + T + Q+ + L S + +HRD+ NIL++ + +K+
Sbjct: 110 ELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPE---CVKL 166
Query: 111 ADFGLSCTLYPGNYAE-KVCGSPL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPP 167
DFGLS + +Y + V P+ +M+PE + F+R+ D+W ++E+L+ G P
Sbjct: 167 GDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP 226
Query: 168 FSGRNNVQLI 177
F N +I
Sbjct: 227 FFWLENKDVI 236
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 95/190 (50%), Gaps = 19/190 (10%)
Query: 3 KKLNKHLKSCL-DCELN----------FLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGG 51
+K+N +K+C DC L+ + +++HP+I++L + E ++++E G
Sbjct: 39 EKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEP-TWIIMELYPYG 97
Query: 52 NLSSYI-RLHGRVPEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKI 110
L Y+ R + T + Q+ + L S + +HRD+ NIL++ + +K+
Sbjct: 98 ELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPE---CVKL 154
Query: 111 ADFGLSCTLYPGNYAE-KVCGSPL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPP 167
DFGLS + +Y + V P+ +M+PE + F+R+ D+W ++E+L+ G P
Sbjct: 155 GDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP 214
Query: 168 FSGRNNVQLI 177
F N +I
Sbjct: 215 FFWLENKDVI 224
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 79/157 (50%), Gaps = 9/157 (5%)
Query: 26 PNIIRLFDAFQ--AENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQLGAGLEILN 83
PNII L D + LV E N + + +L+ + + R ++ ++ L+ +
Sbjct: 97 PNIITLADIVKDPVSRTPALVFEHV---NNTDFKQLYQTLTDYDIRFYMYEILKALDYCH 153
Query: 84 SHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVL-QF 142
S I+HRD+KP N+++ + L++ D+GL+ +PG S + PE+L +
Sbjct: 154 SMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDY 211
Query: 143 QRYDEKVDMWSVGAILFELL-NGYPPFSGRNNVQLIV 178
Q YD +DMWS+G +L ++ P F G +N +V
Sbjct: 212 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 248
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 79/157 (50%), Gaps = 9/157 (5%)
Query: 26 PNIIRLFDAFQ--AENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQLGAGLEILN 83
PNII L D + LV E N + + +L+ + + R ++ ++ L+ +
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHV---NNTDFKQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 84 SHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVL-QF 142
S I+HRD+KP N+++ + L++ D+GL+ +PG S + PE+L +
Sbjct: 149 SMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDY 206
Query: 143 QRYDEKVDMWSVGAILFELL-NGYPPFSGRNNVQLIV 178
Q YD +DMWS+G +L ++ P F G +N +V
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 79/157 (50%), Gaps = 9/157 (5%)
Query: 26 PNIIRLFDAFQ--AENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQLGAGLEILN 83
PNII L D + LV E N + + +L+ + + R ++ ++ L+ +
Sbjct: 91 PNIITLADIVKDPVSRTPALVFEHV---NNTDFKQLYQTLTDYDIRFYMYEILKALDYCH 147
Query: 84 SHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVL-QF 142
S I+HRD+KP N+++ + L++ D+GL+ +PG S + PE+L +
Sbjct: 148 SMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDY 205
Query: 143 QRYDEKVDMWSVGAILFELL-NGYPPFSGRNNVQLIV 178
Q YD +DMWS+G +L ++ P F G +N +V
Sbjct: 206 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 242
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 76/157 (48%), Gaps = 9/157 (5%)
Query: 19 FLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH-GRVPEQTARKFLQQLGA 77
++S++HP+++RL + I LV + G L Y+ H + Q + Q+
Sbjct: 70 IMASMDHPHLVRLLGVCLSPT-IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAK 128
Query: 78 GLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPL---Y 134
G+ L ++HRDL N+L+ + +KI DFGL+ L G + +
Sbjct: 129 GMMYLEERRLVHRDLAARNVLVKSPNH---VKITDFGLARLLEGDEKEYNADGGKMPIKW 185
Query: 135 MAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSG 170
MA E + ++++ + D+WS G ++EL+ G P+ G
Sbjct: 186 MALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDG 222
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 77/160 (48%), Gaps = 9/160 (5%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH-GRVPEQTARKFLQQ 74
E ++S++HP+++RL + I LV + G L Y+ H + Q + Q
Sbjct: 90 EALIMASMDHPHLVRLLGVCLSPT-IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ 148
Query: 75 LGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPL- 133
+ G+ L ++HRDL N+L+ + +KI DFGL+ L G +
Sbjct: 149 IAKGMMYLEERRLVHRDLAARNVLVKSPNH---VKITDFGLARLLEGDEKEYNADGGKMP 205
Query: 134 --YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSG 170
+MA E + ++++ + D+WS G ++EL+ G P+ G
Sbjct: 206 IKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDG 245
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 95/213 (44%), Gaps = 42/213 (19%)
Query: 10 KSCLDCELNFLSSVN-HPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLH-------- 60
K L EL +S + H NI+ L A + ++ E+C G+L +++R
Sbjct: 78 KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPS 137
Query: 61 ---GRVPEQTARK------------FLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDD 105
G+ PE ++ F Q+ G+ L S + IHRD+ N+LL+ +
Sbjct: 138 LAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLT---NG 194
Query: 106 VMLKIADFGLSCTLY-PGNYAEKVCGS-PL-YMAPEVLQFQRYDEKVDMWSVGAILFELL 162
+ KI DFGL+ + NY K P+ +MAPE + Y + D+WS G +L+E+
Sbjct: 195 HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF 254
Query: 163 N-GYPPFSG-----------RNNVQLIVPALHP 183
+ G P+ G ++ Q+ PA P
Sbjct: 255 SLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAP 287
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 78/159 (49%), Gaps = 12/159 (7%)
Query: 13 LDCELNFLSSVNHPNIIRLFDAFQAE---NCIFLVVEFCAGGNLSSYI-RLHGRVPEQTA 68
L E+ L ++ H NI++ + E N I L++EF G+L Y+ + ++ +
Sbjct: 58 LKKEIEILRNLYHENIVK-YKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQ 116
Query: 69 RKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKV 128
K+ Q+ G++ L S +HRDL N+L ++ + +KI DFGL+ + V
Sbjct: 117 LKYAVQICKGMDYLGSRQYVHRDLAARNVL---VESEHQVKIGDFGLTKAIETDKEXXTV 173
Query: 129 C---GSPL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN 163
SP+ + APE L ++ D+WS G L ELL
Sbjct: 174 KDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 60/101 (59%), Gaps = 7/101 (6%)
Query: 74 QLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPG-NYAEKVCGS- 131
Q+ G+E L+S IHRDL NILLS ++ ++KI DFGL+ +Y +Y K
Sbjct: 207 QVARGMEFLSSRKCIHRDLAARNILLS---ENNVVKICDFGLARDIYKNPDYVRKGDTRL 263
Query: 132 PL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN-GYPPFSG 170
PL +MAPE + + Y K D+WS G +L+E+ + G P+ G
Sbjct: 264 PLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPG 304
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 12 CLDCELNFLSSVNHP-NIIRLFDAFQAENC-IFLVVEFCAGGNLSSYIR 58
L EL L+ + H N++ L A + + ++VE+C GNLS+Y++
Sbjct: 76 ALMTELKILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYLK 124
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 78/159 (49%), Gaps = 12/159 (7%)
Query: 13 LDCELNFLSSVNHPNIIRLFDAFQAE---NCIFLVVEFCAGGNLSSYI-RLHGRVPEQTA 68
L E+ L ++ H NI++ + E N I L++EF G+L Y+ + ++ +
Sbjct: 70 LKKEIEILRNLYHENIVK-YKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQ 128
Query: 69 RKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKV 128
K+ Q+ G++ L S +HRDL N+L ++ + +KI DFGL+ + V
Sbjct: 129 LKYAVQICKGMDYLGSRQYVHRDLAARNVL---VESEHQVKIGDFGLTKAIETDKEXXTV 185
Query: 129 C---GSPL-YMAPEVLQFQRYDEKVDMWSVGAILFELLN 163
SP+ + APE L ++ D+WS G L ELL
Sbjct: 186 KDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 78/157 (49%), Gaps = 9/157 (5%)
Query: 26 PNIIRLFDAFQ--AENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQLGAGLEILN 83
PNII L D + LV E N + + +L + + R ++ ++ L+ +
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHV---NNTDFKQLRQTLTDYDIRFYMYEILKALDYCH 148
Query: 84 SHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVL-QF 142
S I+HRD+KP N+++ + L++ D+GL+ +PG S + PE+L +
Sbjct: 149 SMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDY 206
Query: 143 QRYDEKVDMWSVGAILFELL-NGYPPFSGRNNVQLIV 178
Q YD +DMWS+G +L ++ P F G +N +V
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 86/167 (51%), Gaps = 11/167 (6%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDAF--QAENCIFLVVEF-CAGGNLSSYIRL--HG 61
K L+ D + S+ +I++L D F + N + +V+ F G NL + I+ H
Sbjct: 67 KLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHR 126
Query: 62 RVPEQTARKFLQQLGAGLEILNSH-HIIHRDLKPENILLSGLDDD---VMLKIADFGLSC 117
+P ++ +QL GL+ ++ IIH D+KPEN+L+ +D + +KIAD G +C
Sbjct: 127 GIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNAC 186
Query: 118 TLYPGNYAEKVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNG 164
Y +Y + + Y +PEVL + D+WS ++FEL+ G
Sbjct: 187 -WYDEHYTNSIQ-TREYRSPEVLLGAPWGCGADIWSTACLIFELITG 231
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 82/173 (47%), Gaps = 25/173 (14%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAE--------NCIFLVVEFCA---GGNLSSYIRLHGRVP 64
E+ L + H N++ L + + + I+LV +FC G LS+ + +
Sbjct: 67 EIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV---KFT 123
Query: 65 EQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL----- 119
++ +Q L GL ++ + I+HRD+K N+L++ D +LK+ADFGL+
Sbjct: 124 LSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT---RDGVLKLADFGLARAFSLAKN 180
Query: 120 -YPGNYAEKVCGSPLYMAPEVLQFQR-YDEKVDMWSVGAILFELLNGYPPFSG 170
P Y +V + Y PE+L +R Y +D+W G I+ E+ P G
Sbjct: 181 SQPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQG 232
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 86/167 (51%), Gaps = 11/167 (6%)
Query: 7 KHLKSCLDCELNFLSSVNHPNIIRLFDAF--QAENCIFLVVEF-CAGGNLSSYIRL--HG 61
K L+ D + S+ +I++L D F + N + +V+ F G NL + I+ H
Sbjct: 67 KLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHR 126
Query: 62 RVPEQTARKFLQQLGAGLEILNSH-HIIHRDLKPENILLSGLDDD---VMLKIADFGLSC 117
+P ++ +QL GL+ ++ IIH D+KPEN+L+ +D + +KIAD G +C
Sbjct: 127 GIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNAC 186
Query: 118 TLYPGNYAEKVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNG 164
Y +Y + + Y +PEVL + D+WS ++FEL+ G
Sbjct: 187 -WYDEHYTNSIQ-TREYRSPEVLLGAPWGCGADIWSTACLIFELITG 231
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 82/173 (47%), Gaps = 25/173 (14%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAE--------NCIFLVVEFCA---GGNLSSYIRLHGRVP 64
E+ L + H N++ L + + + I+LV +FC G LS+ + +
Sbjct: 66 EIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL---VKFT 122
Query: 65 EQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL----- 119
++ +Q L GL ++ + I+HRD+K N+L++ D +LK+ADFGL+
Sbjct: 123 LSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT---RDGVLKLADFGLARAFSLAKN 179
Query: 120 -YPGNYAEKVCGSPLYMAPEVLQFQR-YDEKVDMWSVGAILFELLNGYPPFSG 170
P Y +V + Y PE+L +R Y +D+W G I+ E+ P G
Sbjct: 180 SQPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQG 231
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 93/214 (43%), Gaps = 24/214 (11%)
Query: 20 LSSVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGR---VPEQTARKFLQQLG 76
+ +V+ P + + A E +++ +E Y ++ + +PE K +
Sbjct: 60 MRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIV 119
Query: 77 AGLEILNSH-HIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYM 135
LE L+S +IHRD+KP N+L++ L +K+ DFG+S L + G YM
Sbjct: 120 KALEHLHSKLSVIHRDVKPSNVLINALG---QVKMCDFGISGYLVDDVAKDIDAGCKPYM 176
Query: 136 APE----VLQFQRYDEKVDMWSVGAILFEL-LNGYP------PFSGRNNV------QLIV 178
APE L + Y K D+WS+G + EL + +P PF V QL
Sbjct: 177 APERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPA 236
Query: 179 PALHPDCVDMCLKLLSANTVDRLSFNEFYHHRFL 212
+ VD + L N+ +R ++ E H F
Sbjct: 237 DKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFF 270
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 79/156 (50%), Gaps = 9/156 (5%)
Query: 27 NIIRLFDAFQ--AENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNS 84
NII+L D + LV E+ N + + +L+ + + R ++ +L L+ +S
Sbjct: 94 NIIKLIDTVKDPVSKTPALVFEYI---NNTDFKQLYQILTDFDIRFYMYELLKALDYCHS 150
Query: 85 HHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVL-QFQ 143
I+HRD+KP N+++ L++ D+GL+ +P S + PE+L +Q
Sbjct: 151 KGIMHRDVKPHNVMID--HQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQ 208
Query: 144 RYDEKVDMWSVGAILFELLNGYPP-FSGRNNVQLIV 178
YD +DMWS+G +L ++ P F G++N +V
Sbjct: 209 MYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLV 244
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 77/167 (46%), Gaps = 31/167 (18%)
Query: 2 LKKLNKHLKSCLDCELNFLSSV-------NHPNIIRLFDAFQAENCIFLVVEFCAGGNLS 54
+K+ K L +D E N L V H +++R F A+ ++ + + E+C GG+L+
Sbjct: 37 IKRSKKPLAGSVD-EQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLA 95
Query: 55 SYIRLHGRV----PEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLS---------- 100
I + R+ E + L Q+G GL ++S ++H D+KP NI +S
Sbjct: 96 DAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASE 155
Query: 101 -GLDDD-----VMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVLQ 141
G +DD VM KI D G + E G ++A EVLQ
Sbjct: 156 EGDEDDWASNKVMFKIGDLGHVTRISSPQVEE---GDSRFLANEVLQ 199
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 82/173 (47%), Gaps = 25/173 (14%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAE--------NCIFLVVEFCA---GGNLSSYIRLHGRVP 64
E+ L + H N++ L + + + I+LV +FC G LS+ + +
Sbjct: 67 EIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV---KFT 123
Query: 65 EQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL----- 119
++ +Q L GL ++ + I+HRD+K N+L++ D +LK+ADFGL+
Sbjct: 124 LSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT---RDGVLKLADFGLARAFSLAKN 180
Query: 120 -YPGNYAEKVCGSPLYMAPEVLQFQR-YDEKVDMWSVGAILFELLNGYPPFSG 170
P Y +V + Y PE+L +R Y +D+W G I+ E+ P G
Sbjct: 181 SQPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQG 232
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 79/156 (50%), Gaps = 9/156 (5%)
Query: 27 NIIRLFDAFQ--AENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQLGAGLEILNS 84
NII+L D + LV E+ N + + +L+ + + R ++ +L L+ +S
Sbjct: 99 NIIKLIDTVKDPVSKTPALVFEYI---NNTDFKQLYQILTDFDIRFYMYELLKALDYCHS 155
Query: 85 HHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVL-QFQ 143
I+HRD+KP N+++ L++ D+GL+ +P S + PE+L +Q
Sbjct: 156 KGIMHRDVKPHNVMID--HQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQ 213
Query: 144 RYDEKVDMWSVGAILFELLNGYPP-FSGRNNVQLIV 178
YD +DMWS+G +L ++ P F G++N +V
Sbjct: 214 MYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLV 249
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 77/167 (46%), Gaps = 31/167 (18%)
Query: 2 LKKLNKHLKSCLDCELNFLSSV-------NHPNIIRLFDAFQAENCIFLVVEFCAGGNLS 54
+K+ K L +D E N L V H +++R F A+ ++ + + E+C GG+L+
Sbjct: 39 IKRSKKPLAGSVD-EQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLA 97
Query: 55 SYIRLHGRV----PEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLS---------- 100
I + R+ E + L Q+G GL ++S ++H D+KP NI +S
Sbjct: 98 DAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASE 157
Query: 101 -GLDDD-----VMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVLQ 141
G +DD VM KI D G + E G ++A EVLQ
Sbjct: 158 EGDEDDWASNKVMFKIGDLGHVTRISSPQVEE---GDSRFLANEVLQ 201
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 80/158 (50%), Gaps = 11/158 (6%)
Query: 26 PNIIRLFDAF--QAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQLGAGLEILN 83
PNI++L D Q L+ E+ N + + L+ + + R ++ +L L+ +
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYV---NNTDFKVLYPTLTDYDIRYYIYELLKALDYCH 142
Query: 84 SHHIIHRDLKPENILLSGLDDDV-MLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVL-Q 141
S I+HRD+KP N++ +D ++ L++ D+GL+ +PG S + PE+L
Sbjct: 143 SQGIMHRDVKPHNVM---IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 199
Query: 142 FQRYDEKVDMWSVGAILFELL-NGYPPFSGRNNVQLIV 178
Q YD +DMWS+G + ++ P F G +N +V
Sbjct: 200 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLV 237
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 115/243 (47%), Gaps = 35/243 (14%)
Query: 16 ELNFLS-SVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARK---- 70
E+ L+ S +HPN+IR + + + +++ +E C NL + E +
Sbjct: 76 EIKLLTESDDHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYN 134
Query: 71 ---FLQQLGAGLEILNSHHIIHRDLKPENILLSGLD----------DDVMLKIADFGLSC 117
L+Q+ +G+ L+S IIHRDLKP+NIL+S +++ + I+DFGL
Sbjct: 135 PISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 194
Query: 118 TLYPGNYAEKV-----CGSPLYMAPEVLQ---FQRYDEKVDMWSVGAILFELLN-GYPPF 168
L G + G+ + APE+L+ +R +D++S+G + + +L+ G PF
Sbjct: 195 KLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPF 254
Query: 169 SGRNNVQL-IVPALHPDCVDMCL--KLLSANTVDRLSFNEFYHHRFLRRNSA--ILRAPF 223
+ + + I+ + CL + L A D +S + H L+R +A +LR P
Sbjct: 255 GDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLIS--QMIDHDPLKRPTAMKVLRHPL 312
Query: 224 HIP 226
P
Sbjct: 313 FWP 315
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 80/158 (50%), Gaps = 11/158 (6%)
Query: 26 PNIIRLFDAF--QAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQLGAGLEILN 83
PNI++L D Q L+ E+ N + + L+ + + R ++ +L L+ +
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIFEYV---NNTDFKVLYPTLTDYDIRYYIYELLKALDYCH 143
Query: 84 SHHIIHRDLKPENILLSGLDDDV-MLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVL-Q 141
S I+HRD+KP N++ +D ++ L++ D+GL+ +PG S + PE+L
Sbjct: 144 SQGIMHRDVKPHNVM---IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 200
Query: 142 FQRYDEKVDMWSVGAILFELL-NGYPPFSGRNNVQLIV 178
Q YD +DMWS+G + ++ P F G +N +V
Sbjct: 201 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLV 238
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 77/167 (46%), Gaps = 31/167 (18%)
Query: 2 LKKLNKHLKSCLDCELNFLSSV-------NHPNIIRLFDAFQAENCIFLVVEFCAGGNLS 54
+K+ K L +D E N L V H +++R F A+ ++ + + E+C GG+L+
Sbjct: 39 IKRSKKPLAGSVD-EQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLA 97
Query: 55 SYIRLHGRV----PEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLS---------- 100
I + R+ E + L Q+G GL ++S ++H D+KP NI +S
Sbjct: 98 DAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASE 157
Query: 101 -GLDDD-----VMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVLQ 141
G +DD VM KI D G + E G ++A EVLQ
Sbjct: 158 EGDEDDWASNKVMFKIGDLGHVTRISSPQVEE---GDSRFLANEVLQ 201
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 115/243 (47%), Gaps = 35/243 (14%)
Query: 16 ELNFLS-SVNHPNIIRLFDAFQAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARK---- 70
E+ L+ S +HPN+IR + + + +++ +E C NL + E +
Sbjct: 76 EIKLLTESDDHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYN 134
Query: 71 ---FLQQLGAGLEILNSHHIIHRDLKPENILLSGLD----------DDVMLKIADFGLSC 117
L+Q+ +G+ L+S IIHRDLKP+NIL+S +++ + I+DFGL
Sbjct: 135 PISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 194
Query: 118 TLYPGNYAEKV-----CGSPLYMAPEVLQ---FQRYDEKVDMWSVGAILFELLN-GYPPF 168
L G + G+ + APE+L+ +R +D++S+G + + +L+ G PF
Sbjct: 195 KLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPF 254
Query: 169 SGRNNVQL-IVPALHPDCVDMCL--KLLSANTVDRLSFNEFYHHRFLRRNSA--ILRAPF 223
+ + + I+ + CL + L A D +S + H L+R +A +LR P
Sbjct: 255 GDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLIS--QMIDHDPLKRPTAMKVLRHPL 312
Query: 224 HIP 226
P
Sbjct: 313 FWP 315
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 80/158 (50%), Gaps = 11/158 (6%)
Query: 26 PNIIRLFDAF--QAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQLGAGLEILN 83
PNI++L D Q L+ E+ N + + L+ + + R ++ +L L+ +
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYV---NNTDFKVLYPTLTDYDIRYYIYELLKALDYCH 142
Query: 84 SHHIIHRDLKPENILLSGLDDDV-MLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVL-Q 141
S I+HRD+KP N++ +D ++ L++ D+GL+ +PG S + PE+L
Sbjct: 143 SQGIMHRDVKPHNVM---IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 199
Query: 142 FQRYDEKVDMWSVGAILFELL-NGYPPFSGRNNVQLIV 178
Q YD +DMWS+G + ++ P F G +N +V
Sbjct: 200 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLV 237
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 80/158 (50%), Gaps = 11/158 (6%)
Query: 26 PNIIRLFDAF--QAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQLGAGLEILN 83
PNI++L D Q L+ E+ N + + L+ + + R ++ +L L+ +
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYV---NNTDFKVLYPTLTDYDIRYYIYELLKALDYCH 142
Query: 84 SHHIIHRDLKPENILLSGLDDDV-MLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVL-Q 141
S I+HRD+KP N++ +D ++ L++ D+GL+ +PG S + PE+L
Sbjct: 143 SQGIMHRDVKPHNVM---IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 199
Query: 142 FQRYDEKVDMWSVGAILFELL-NGYPPFSGRNNVQLIV 178
Q YD +DMWS+G + ++ P F G +N +V
Sbjct: 200 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLV 237
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 80/158 (50%), Gaps = 11/158 (6%)
Query: 26 PNIIRLFDAF--QAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQLGAGLEILN 83
PNI++L D Q L+ E+ N + + L+ + + R ++ +L L+ +
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYV---NNTDFKVLYPTLTDYDIRYYIYELLKALDYCH 142
Query: 84 SHHIIHRDLKPENILLSGLDDDV-MLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVL-Q 141
S I+HRD+KP N++ +D ++ L++ D+GL+ +PG S + PE+L
Sbjct: 143 SQGIMHRDVKPHNVM---IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 199
Query: 142 FQRYDEKVDMWSVGAILFELL-NGYPPFSGRNNVQLIV 178
Q YD +DMWS+G + ++ P F G +N +V
Sbjct: 200 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLV 237
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 82/173 (47%), Gaps = 25/173 (14%)
Query: 16 ELNFLSSVNHPNIIRLFDAFQAENC--------IFLVVEFCA---GGNLSSYIRLHGRVP 64
E+ L + H N++ L + + + I+LV +FC G LS+ + +
Sbjct: 67 EIKILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLV---KFT 123
Query: 65 EQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLSGLDDDVMLKIADFGLSCTL----- 119
++ +Q L GL ++ + I+HRD+K N+L++ D +LK+ADFGL+
Sbjct: 124 LSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT---RDGVLKLADFGLARAFSLAKN 180
Query: 120 -YPGNYAEKVCGSPLYMAPEVLQFQR-YDEKVDMWSVGAILFELLNGYPPFSG 170
P Y +V + Y PE+L +R Y +D+W G I+ E+ P G
Sbjct: 181 SQPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQG 232
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 77/167 (46%), Gaps = 31/167 (18%)
Query: 2 LKKLNKHLKSCLDCELNFLSSV-------NHPNIIRLFDAFQAENCIFLVVEFCAGGNLS 54
+K+ K L +D E N L V H +++R F A+ ++ + + E+C GG+L+
Sbjct: 41 IKRSKKPLAGSVD-EQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLA 99
Query: 55 SYIRLHGRV----PEQTARKFLQQLGAGLEILNSHHIIHRDLKPENILLS---------- 100
I + R+ E + L Q+G GL ++S ++H D+KP NI +S
Sbjct: 100 DAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASE 159
Query: 101 -GLDDD-----VMLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVLQ 141
G +DD VM KI D G + E G ++A EVLQ
Sbjct: 160 EGDEDDWASNKVMFKIGDLGHVTRISSPQVEE---GDSRFLANEVLQ 203
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 80/158 (50%), Gaps = 11/158 (6%)
Query: 26 PNIIRLFDAF--QAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQLGAGLEILN 83
PNI++L D Q L+ E+ N + + L+ + + R ++ +L L+ +
Sbjct: 88 PNIVKLLDIVRDQHSKTPSLIFEYV---NNTDFKVLYPTLTDYDIRYYIYELLKALDYCH 144
Query: 84 SHHIIHRDLKPENILLSGLDDDV-MLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVL-Q 141
S I+HRD+KP N++ +D ++ L++ D+GL+ +PG S + PE+L
Sbjct: 145 SQGIMHRDVKPHNVM---IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 201
Query: 142 FQRYDEKVDMWSVGAILFELL-NGYPPFSGRNNVQLIV 178
Q YD +DMWS+G + ++ P F G +N +V
Sbjct: 202 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLV 239
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 80/158 (50%), Gaps = 11/158 (6%)
Query: 26 PNIIRLFDAF--QAENCIFLVVEFCAGGNLSSYIRLHGRVPEQTARKFLQQLGAGLEILN 83
PNI++L D Q L+ E+ N + + L+ + + R ++ +L L+ +
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYV---NNTDFKVLYPTLTDYDIRYYIYELLKALDYCH 142
Query: 84 SHHIIHRDLKPENILLSGLDDDV-MLKIADFGLSCTLYPGNYAEKVCGSPLYMAPEVL-Q 141
S I+HRD+KP N++ +D ++ L++ D+GL+ +PG S + PE+L
Sbjct: 143 SQGIMHRDVKPHNVM---IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 199
Query: 142 FQRYDEKVDMWSVGAILFELL-NGYPPFSGRNNVQLIV 178
Q YD +DMWS+G + ++ P F G +N +V
Sbjct: 200 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLV 237
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.326 0.143 0.444
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,165,239
Number of Sequences: 62578
Number of extensions: 299134
Number of successful extensions: 3851
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1032
Number of HSP's successfully gapped in prelim test: 69
Number of HSP's that attempted gapping in prelim test: 711
Number of HSP's gapped (non-prelim): 1165
length of query: 226
length of database: 14,973,337
effective HSP length: 95
effective length of query: 131
effective length of database: 9,028,427
effective search space: 1182723937
effective search space used: 1182723937
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 50 (23.9 bits)