BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027234
(226 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZWJ9|ARR2_ARATH Two-component response regulator ARR2 OS=Arabidopsis thaliana
GN=ARR2 PE=1 SV=1
Length = 664
Score = 293 bits (751), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 157/232 (67%), Positives = 178/232 (76%), Gaps = 16/232 (6%)
Query: 3 FSVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLELVGLEMDLPVIMMCAHGS 62
+ VTKCNRAE AL +LR NKNG+DIVISDVHMPDMDGFKLLE VGLEMDLPVIMM A S
Sbjct: 52 YRVTKCNRAESALSLLRKNKNGFDIVISDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDS 111
Query: 63 KEVVMKGVTHDACDYLTKPVRIEELKNIWQHVVRKRKNERKDLEQS-GSVE--GG---AQ 116
K VV+KGVTH A DYL KPVRIE LKNIWQHVVRK++NE E S GS+E GG Q
Sbjct: 112 KSVVLKGVTHGAVDYLIKPVRIEALKNIWQHVVRKKRNEWNVSEHSGGSIEDTGGDRDRQ 171
Query: 117 QPKPFEESDDSYSVNEGTS-NSRKDEEEEAEKR---------LKKPRLVWSVELHQQFVS 166
Q + ++S SVNEG +SRK +EEE + + LKKPR+VWSVELHQQFV+
Sbjct: 172 QQHREDADNNSSSVNEGNGRSSRKRKEEEVDDQGDDKEDSSSLKKPRVVWSVELHQQFVA 231
Query: 167 AVKELGFDKAGPKKILELMNIPGLTRENVASHLQKHRLYLSRLSGVSPQQGN 218
AV +LG DKA PKKILE+MN+PGLTRENVASHLQK+R+YL RL GVS QGN
Sbjct: 232 AVNQLGVDKAVPKKILEMMNVPGLTRENVASHLQKYRIYLRRLGGVSQHQGN 283
>sp|Q940D0|ARR1_ARATH Two-component response regulator ARR1 OS=Arabidopsis thaliana
GN=ARR1 PE=1 SV=2
Length = 690
Score = 291 bits (746), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 157/244 (64%), Positives = 183/244 (75%), Gaps = 28/244 (11%)
Query: 3 FSVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLELVGLEMDLPVIMMCAHGS 62
+ VTKCNRAE+AL +LR NK+G+DIVISDVHMPDMDGFKLLE VGLEMDLPVIMM A S
Sbjct: 61 YEVTKCNRAEMALSLLRKNKHGFDIVISDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDS 120
Query: 63 KEVVMKGVTHDACDYLTKPVRIEELKNIWQHVVRKRKNERKDLEQSGSVE--GGAQQPK- 119
K VV+KGVTH A DYL KPVR+E LKNIWQHVVRKR++E E SGS+E G QQ +
Sbjct: 121 KSVVLKGVTHGAVDYLIKPVRMEALKNIWQHVVRKRRSEWSVPEHSGSIEETGERQQQQH 180
Query: 120 ----------PFEES--DDSYSVNEGT---SNSRKDEEEEAEKR----------LKKPRL 154
E++ D+S SVNEG S+SRK ++EE E++ LKKPR+
Sbjct: 181 RGGGGGAAVSGGEDAVDDNSSSVNEGNNWRSSSRKRKDEEGEEQGDDKDEDASNLKKPRV 240
Query: 155 VWSVELHQQFVSAVKELGFDKAGPKKILELMNIPGLTRENVASHLQKHRLYLSRLSGVSP 214
VWSVELHQQFV+AV +LG +KA PKKILELMN+PGLTRENVASHLQK+R+YL RL GVS
Sbjct: 241 VWSVELHQQFVAAVNQLGVEKAVPKKILELMNVPGLTRENVASHLQKYRIYLRRLGGVSQ 300
Query: 215 QQGN 218
QGN
Sbjct: 301 HQGN 304
>sp|P62598|ARR12_ARATH Two-component response regulator ARR12 OS=Arabidopsis thaliana
GN=ARR12 PE=2 SV=2
Length = 596
Score = 243 bits (621), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 129/235 (54%), Positives = 157/235 (66%), Gaps = 34/235 (14%)
Query: 3 FSVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLELVGLEMDLPVIMMCAHGS 62
+ VT N+A+ AL++LR NKN +D+VISDV MPDMDGFKLLELVGLEMDLPVIM+ AH
Sbjct: 41 YHVTTTNQAQKALELLRENKNKFDLVISDVDMPDMDGFKLLELVGLEMDLPVIMLSAHSD 100
Query: 63 KEVVMKGVTHDACDYLTKPVRIEELKNIWQHVVRKRKNERKDLEQSGSVEGGAQQPKPFE 122
+ VMKGVTH ACDYL KPVRIEELKNIWQHVVR R ++ + +G G
Sbjct: 101 PKYVMKGVTHGACDYLLKPVRIEELKNIWQHVVRSRFDKNRGSNNNGDKRDG-------- 152
Query: 123 ESDDSYSVNEGTSNSRKDEEEEAEKR--------------------LKKPRLVWSVELHQ 162
S NEG NS ++ + KR KK R+VW+VELH+
Sbjct: 153 ------SGNEGVGNSDQNNGKGNRKRKDQYNEDEDEDRDDNDDSCAQKKQRVVWTVELHK 206
Query: 163 QFVSAVKELGFDKAGPKKILELMNIPGLTRENVASHLQKHRLYLSRLSGVSPQQG 217
+FV+AV +LG++KA PKKIL+LMN+ LTRENVASHLQK RLYL R+SGV+ QQ
Sbjct: 207 KFVAAVNQLGYEKAMPKKILDLMNVEKLTRENVASHLQKFRLYLKRISGVANQQA 261
>sp|Q9FXD6|ARR11_ARATH Two-component response regulator ARR11 OS=Arabidopsis thaliana
GN=ARR11 PE=1 SV=1
Length = 521
Score = 228 bits (582), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 126/220 (57%), Positives = 154/220 (70%), Gaps = 15/220 (6%)
Query: 3 FSVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLELVGLEMDLPVIMMCAHGS 62
+ VT C A AL +LR K+GYDIVISDV+MPDMDGFKLLE VGLE+DLPVIMM G
Sbjct: 35 YEVTTCGLAREALRLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLELDLPVIMMSVDGE 94
Query: 63 KEVVMKGVTHDACDYLTKPVRIEELKNIWQHVVRKRKNERKDLEQSGSVEGGAQQPKPFE 122
VMKGV H ACDYL KP+R++ELK IWQHV+RK+ E +D+E G EGGA ++
Sbjct: 95 TSRVMKGVQHGACDYLLKPIRMKELKIIWQHVLRKKLQEVRDIEGCG-YEGGADWITRYD 153
Query: 123 ESDDSYSVNEGTSNSRKDEEEEAEKRL------------KKPRLVWSVELHQQFVSAVKE 170
E+ E S +K ++ + EK+L KK R+VWS ELH +FV+AV +
Sbjct: 154 EA-HFLGGGEDVSFGKKRKDFDFEKKLLQDESDPSSSSSKKARVVWSFELHHKFVNAVNQ 212
Query: 171 LGFD-KAGPKKILELMNIPGLTRENVASHLQKHRLYLSRL 209
+G D KAGPKKIL+LMN+P LTRENVASHLQK+RLYLSRL
Sbjct: 213 IGCDHKAGPKKILDLMNVPWLTRENVASHLQKYRLYLSRL 252
>sp|O49397|ARR10_ARATH Two-component response regulator ARR10 OS=Arabidopsis thaliana
GN=ARR10 PE=1 SV=1
Length = 552
Score = 221 bits (563), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 118/216 (54%), Positives = 149/216 (68%), Gaps = 6/216 (2%)
Query: 3 FSVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLELVGLEMDLPVIMMCAHGS 62
+ VT N+A+ AL++LR NKN +D+VISDV MPDMDGFKLLELVGLEMDLPVIM+ AH
Sbjct: 41 YHVTTTNQAQTALELLRENKNKFDLVISDVDMPDMDGFKLLELVGLEMDLPVIMLSAHSD 100
Query: 63 KEVVMKGVTHDACDYLTKPVRIEELKNIWQHVVRKRKNERKDLEQSGSVEGGAQQPKPFE 122
+ VMKGV H ACDYL KPVRIEELKNIWQHVVRK K ++ S G K
Sbjct: 101 PKYVMKGVKHGACDYLLKPVRIEELKNIWQHVVRKSKLKKNKSNVS---NGSGNCDKANR 157
Query: 123 ESDDSYSVNEGTSNSRKDEEEEAEKRLKKPRLVWSVELHQQFVSAVKELGFDKAGPKKIL 182
+ + Y E +++ A+ KKPR++W+ ELH +F++AV LG ++A PKKIL
Sbjct: 158 KRKEQYEEEEEEERGNDNDDPTAQ---KKPRVLWTHELHNKFLAAVDHLGVERAVPKKIL 214
Query: 183 ELMNIPGLTRENVASHLQKHRLYLSRLSGVSPQQGN 218
+LMN+ LTRENVASHLQK R+ L ++S + QQ N
Sbjct: 215 DLMNVDKLTRENVASHLQKFRVALKKVSDDAIQQAN 250
>sp|Q8L9Y3|ARR14_ARATH Two-component response regulator ARR14 OS=Arabidopsis thaliana
GN=ARR14 PE=1 SV=2
Length = 382
Score = 221 bits (562), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 120/234 (51%), Positives = 154/234 (65%), Gaps = 17/234 (7%)
Query: 3 FSVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLELVGL-EMDLPVIMMCAHG 61
+ VT C++A++AL +LR K+ +D+V+SDVHMP M+G+ LL+ VGL EMDLPVIMM G
Sbjct: 35 YQVTICSQADVALTILRERKDSFDLVLSDVHMPGMNGYNLLQQVGLLEMDLPVIMMSVDG 94
Query: 62 SKEVVMKGVTHDACDYLTKPVRIEELKNIWQHVVRKRKNERKDL---------EQSGSVE 112
VM G+ H ACDYL KP+R EELKNIWQHVVR++ +K+L + SGS+E
Sbjct: 95 RTTTVMTGINHGACDYLIKPIRPEELKNIWQHVVRRKCVMKKELRSSQALEDNKNSGSLE 154
Query: 113 GGAQQPKPFEESDDSYSVNEGTSNSRKDEEEEAEKRL-------KKPRLVWSVELHQQFV 165
E N+ R + ++ E L KK R+VWS+ELHQQFV
Sbjct: 155 TVVVSVSECSEESLMKCRNKKKKKKRSVDRDDNEDDLLLDPGNSKKSRVVWSIELHQQFV 214
Query: 166 SAVKELGFDKAGPKKILELMNIPGLTRENVASHLQKHRLYLSRLSGVSPQQGNS 219
+AV +LG DKA PK+ILELMN+PGL+RENVASHLQK RLYL RLSG + Q +S
Sbjct: 215 NAVNKLGIDKAVPKRILELMNVPGLSRENVASHLQKFRLYLKRLSGEASQSNDS 268
>sp|Q9FGT7|ARR18_ARATH Two-component response regulator ARR18 OS=Arabidopsis thaliana
GN=ARR18 PE=2 SV=2
Length = 635
Score = 211 bits (536), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 115/214 (53%), Positives = 148/214 (69%), Gaps = 10/214 (4%)
Query: 3 FSVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLELVGLEMDLPVIMMCAHGS 62
+ VTK + AL+MLR N N +D+VISDV MPD DGFKLLE +GLEMDLPVIM+ AH
Sbjct: 42 YHVTKTMESRKALEMLRENSNMFDLVISDVEMPDTDGFKLLE-IGLEMDLPVIMLSAHSD 100
Query: 63 KEVVMKGVTHDACDYLTKPVRIEELKNIWQHVVRKRKNERKDL---EQSGSVEGGAQQPK 119
+ VMKG+ H ACDYL KPV ++EL+NIW HVV+K L +S SV +++ K
Sbjct: 101 YDSVMKGIIHGACDYLVKPVGLKELQNIWHHVVKKNIKSYAKLLPPSESDSVPSASRKRK 160
Query: 120 PFEESDDS----YSVNEGTSNSRKDEEEEAEKRLKKPRLVWSVELHQQFVSAVKELGFDK 175
++ +DS S E +++ + KKPR+VWS ELHQ+FVSAV++LG DK
Sbjct: 161 --DKVNDSGDEDDSDREEDDGEGSEQDGDGSGTRKKPRVVWSQELHQKFVSAVQQLGLDK 218
Query: 176 AGPKKILELMNIPGLTRENVASHLQKHRLYLSRL 209
A PKKIL+LM+I GLTRENVASHLQK+RLYL ++
Sbjct: 219 AVPKKILDLMSIEGLTRENVASHLQKYRLYLKKI 252
>sp|Q9LZJ8|ARR20_ARATH Putative two-component response regulator ARR20 OS=Arabidopsis
thaliana GN=ARR20 PE=2 SV=1
Length = 426
Score = 157 bits (397), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 98/235 (41%), Positives = 137/235 (58%), Gaps = 16/235 (6%)
Query: 2 GFSVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLELVGLEMDLPVIMMCAHG 61
+ VTK E A+ L NK+ D+VI D HMPD++G L ++G +MDLPV++M
Sbjct: 62 SYQVTKYESGEEAMAFLMKNKHEIDLVIWDFHMPDINGLDALNIIGKQMDLPVVIMSHEY 121
Query: 62 SKEVVMKGVTHDACDYLTKPVRIEELKNIWQHVVRKRKNERKDLEQSGSVEGGAQQPKPF 121
KE VM+ + + ACD+L KPV E + +W+HV RKR + + L++ G E G + P
Sbjct: 122 KKETVMESIKYGACDFLVKPVSKEVIAVLWRHVYRKRMS-KSGLDKPG--ESGTVESDPD 178
Query: 122 E----ESDDSYSVNEGTSNSRKDEEEEAEKRLKKPRLVWSVELHQQFVSAVKELG-FDKA 176
E E D+ Y NE S + D +EE + KKPR+ W+ ELH +F AV+++G +KA
Sbjct: 179 EYDDLEQDNLYESNEEGSKNTCDHKEE-KSPTKKPRMQWTPELHHKFEVAVEKMGSLEKA 237
Query: 177 GPKKILELM----NIPGLTRENVASHLQKHRLYLSRLSGVSPQQGN-SFVSSNIG 226
PK IL+ M N+ GLTR NVASHLQK+R S +PQ+ FV N G
Sbjct: 238 FPKTILKYMQEELNVQGLTRNNVASHLQKYR--QSSKKTCTPQEPQEDFVWGNAG 290
>sp|Q9M9B9|ARR19_ARATH Putative two-component response regulator ARR19 OS=Arabidopsis
thaliana GN=ARR19 PE=2 SV=2
Length = 407
Score = 149 bits (377), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/237 (36%), Positives = 135/237 (56%), Gaps = 17/237 (7%)
Query: 2 GFSVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLELVGLEMDLPVIMMCAHG 61
+ V+ AE AL L + K+ +IVI D HMP +DG + L+ + ++DLPV++M
Sbjct: 57 AYQVSIETDAEKALAFLTSCKHEINIVIWDFHMPGIDGLQALKSITSKLDLPVVIMSDDN 116
Query: 62 SKEVVMKGVTHDACDYLTKPVRIEELKNIWQHVVRKRKNERKDLEQSGSVEGGAQQPKPF 121
E VMK + ACDY+ KPV+ E + NIWQH+VRKR + D+ ++ +P
Sbjct: 117 QTESVMKATFYGACDYVVKPVKEEVMANIWQHIVRKRLIFKPDVAPPKPRMTWSEVFQPV 176
Query: 122 E-----------ESDDSYSVNEGTSNSRKDEEEEAEKRLKKPRLVWSVELHQQFVSAVKE 170
+ + DS ++N G N ++ E++ K+ +KPR+ W+ ELHQ+F+ A++
Sbjct: 177 QSHLVPTDGLDRDHFDSITINGG--NGIQNMEKKQGKKPRKPRMTWTEELHQKFLEAIEI 234
Query: 171 L-GFDKAGPKKILEL---MNIPGLTRENVASHLQKHRLYLSRLSGVSPQQGNSFVSS 223
+ G +KA PK ++E M I G+TR NVASHLQKHR+ L QGN + ++
Sbjct: 235 IGGIEKANPKVLVECLQEMRIEGITRSNVASHLQKHRINLEENQIPQQTQGNGWATA 291
>sp|Q7Y0W3|EHD1_ORYSI Two-component response regulator EHD1 OS=Oryza sativa subsp. indica
PE=2 SV=1
Length = 341
Score = 147 bits (371), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 84/239 (35%), Positives = 122/239 (51%), Gaps = 15/239 (6%)
Query: 2 GFSVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLELVGLEMDLPVIMMCAHG 61
+ VT A+ + N D+VISD P DG +L+ V + +P ++M + G
Sbjct: 34 SYKVTTYKNVREAVPFILDNPQIVDLVISDAFFPTEDGLLILQEVTSKFGIPTVIMASSG 93
Query: 62 SKEVVMKGVTHDACDYLTKPVRIEELKNIWQHVVRKRKNERKDLEQSGSVEGGAQQPKPF 121
VMK V + A D+L KPVRIEEL NIWQH+ RK+ + K+ G++E P
Sbjct: 94 DTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGHPPSIL 153
Query: 122 EESDDSYSVNEGTSNSRKDEEEEAEKR---------------LKKPRLVWSVELHQQFVS 166
+ + + T+ E E R L K RL W+ +LH+QF++
Sbjct: 154 AMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQLHRQFIA 213
Query: 167 AVKELGFDKAGPKKILELMNIPGLTRENVASHLQKHRLYLSRLSGVSPQQGNSFVSSNI 225
AV LG DKA PKKIL +M + LTRE VASHLQK+R+ L + + + G + S+ +
Sbjct: 214 AVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKKSIPTTSKHGATLSSTAL 272
>sp|Q7Y0W5|EHD1_ORYSJ Two-component response regulator EHD1 OS=Oryza sativa subsp.
japonica GN=EHD1 PE=1 SV=1
Length = 341
Score = 147 bits (371), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 84/239 (35%), Positives = 122/239 (51%), Gaps = 15/239 (6%)
Query: 2 GFSVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLELVGLEMDLPVIMMCAHG 61
+ VT A+ + N D+VISD P DG +L+ V + +P ++M + G
Sbjct: 34 SYKVTTYKNVREAVPFILDNPQIVDLVISDAFFPTEDGLLILQEVTSKFGIPTVIMASSG 93
Query: 62 SKEVVMKGVTHDACDYLTKPVRIEELKNIWQHVVRKRKNERKDLEQSGSVEGGAQQPKPF 121
VMK V + A D+L KPVRIEEL NIWQH+ RK+ + K+ G++E P
Sbjct: 94 DTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGHPPSIL 153
Query: 122 EESDDSYSVNEGTSNSRKDEEEEAEKR---------------LKKPRLVWSVELHQQFVS 166
+ + + T+ E E R L K RL W+ +LH+QF++
Sbjct: 154 AMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQLHRQFIA 213
Query: 167 AVKELGFDKAGPKKILELMNIPGLTRENVASHLQKHRLYLSRLSGVSPQQGNSFVSSNI 225
AV LG DKA PKKIL +M + LTRE VASHLQK+R+ L + + + G + S+ +
Sbjct: 214 AVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKKSIPTTSKHGATLSSTAL 272
>sp|Q9FJ16|APRR4_ARATH Putative two-component response regulator-like APRR4 OS=Arabidopsis
thaliana GN=APRR4 PE=3 SV=1
Length = 292
Score = 129 bits (324), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/208 (37%), Positives = 118/208 (56%), Gaps = 11/208 (5%)
Query: 3 FSVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLELVGLEMDLPVIMMCAHGS 62
+ VT CN A+ LR ++N +D+ + V+ + D F+ L +G EMDLP+I++ S
Sbjct: 66 YQVTICNEVNKAMHTLRNHRNRFDLAMIQVNNAEGDIFRFLSEIGSEMDLPIIIISEDDS 125
Query: 63 KEVVMKGVTHDACDYLTKPVRIEELKNIWQHVVRKRKNERKDL---------EQSGSVEG 113
+ V K + + A DYL KP+R E+L+ +++H+V+K + R + E+S SV G
Sbjct: 126 VKSVKKWMINGAADYLIKPIRPEDLRIVFKHLVKKMRERRSVVTGEAEKAAGEKSSSV-G 184
Query: 114 GAQQPKPFEESDDSYSVNEGTSNSRKDEEEEA-EKRLKKPRLVWSVELHQQFVSAVKELG 172
+ P + S E R D + A KK R+VW ELHQ F++AV LG
Sbjct: 185 DSTIRNPNKSKRSSCLEAEVNEEDRHDHNDRACASSAKKRRVVWDEELHQNFLNAVDFLG 244
Query: 173 FDKAGPKKILELMNIPGLTRENVASHLQ 200
++A PKKIL++M + ++RENVASHLQ
Sbjct: 245 LERAVPKKILDVMKVDYISRENVASHLQ 272
>sp|Q9LYP5|ARR21_ARATH Putative two-component response regulator ARR21 OS=Arabidopsis
thaliana GN=ARR21 PE=2 SV=3
Length = 613
Score = 112 bits (280), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 128/244 (52%), Gaps = 38/244 (15%)
Query: 3 FSVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLELVGLEM-DLPVIMMCAHG 61
+ V + + AL L+ ++ D++I+D +MP M+G +L + + E +LPV++M +
Sbjct: 40 YRVIAVDDPKKALSTLKIQRDNIDLIITDYYMPGMNGLQLKKQITQEFGNLPVLVMSSDT 99
Query: 62 SKEVVMKGVTHDACDYLTKPVRIEELKNIWQHVVRKRKNERKDLE-QSGSVEGGAQQPKP 120
+KE + ++ A ++ KP+ +L I+Q + ++N + L + + P+
Sbjct: 100 NKE--EESLSCGAMGFIPKPIHPTDLTKIYQFALSNKRNGKSTLSTEQNHKDADVSVPQQ 157
Query: 121 F----EESD-------------DSYSVN---------EGTSNSRK--------DEEEEAE 146
E++D DS +VN +G+ +RK D+ E
Sbjct: 158 ITLVPEQADVLKTKRKNCSFKSDSRTVNSTNGSCVSTDGSRKNRKRKPNGGPSDDGESMS 217
Query: 147 KRLKKPRLVWSVELHQQFVSAVKELGFDKAGPKKILELMNIPGLTRENVASHLQKHRLYL 206
+ KK ++ W+ LH F+ A++ +G DKA PKKIL M++P LTRENVASHLQK+R++L
Sbjct: 218 QPAKKKKIQWTDSLHDLFLQAIRHIGLDKAVPKKILAFMSVPYLTRENVASHLQKYRIFL 277
Query: 207 SRLS 210
R++
Sbjct: 278 RRVA 281
>sp|Q9ZVD3|ARR13_ARATH Putative two-component response regulator ARR13 OS=Arabidopsis
thaliana GN=ARR13 PE=2 SV=2
Length = 572
Score = 104 bits (260), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 124/242 (51%), Gaps = 38/242 (15%)
Query: 4 SVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLELVGLEM-DLPVIMMCAHGS 62
+V + + AL L+ ++ D++I+D +MP M+G +L + + E +L V++M + +
Sbjct: 44 TVIAVDYPKKALSTLKNQRDNIDLIITDYYMPGMNGLQLKKQITQEFGNLSVLVMSSDPN 103
Query: 63 KEVVMKGVTHDACDYLTKPVRIEELKNIWQHVVRKRKNERKDL-----EQSGSVEGGAQ- 116
KE + ++ A ++ KP+ +L I+Q + ++N + L ++ +V Q
Sbjct: 104 KE--EESLSCGAMGFIPKPIAPTDLPKIYQFALTYKRNGKSTLSTEQNQKDANVSVPQQI 161
Query: 117 ------------QPKPFEESDDSYSVNE------GTSNSRK-----------DEEEEAEK 147
+ K D+ +VN T+ SRK D+ E +
Sbjct: 162 MLVPEQAYVLKTKKKNCSSKSDTRTVNSTNVSHVSTNGSRKNRKRKPKGGPSDDGESLSQ 221
Query: 148 RLKKPRLVWSVELHQQFVSAVKELGFDKAGPKKILELMNIPGLTRENVASHLQKHRLYLS 207
KK ++ W+ L F+ A++ +G+DK PKKIL +MN+P LTRENVASHLQK+RL++
Sbjct: 222 PPKKKKIWWTNPLQDLFLQAIQHIGYDKVVPKKILAIMNVPYLTRENVASHLQKYRLFVK 281
Query: 208 RL 209
R+
Sbjct: 282 RV 283
>sp|Q9C9F6|APRR6_ARATH Putative two-component response regulator-like APRR6 OS=Arabidopsis
thaliana GN=APRR6 PE=3 SV=2
Length = 755
Score = 91.7 bits (226), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 114/250 (45%), Gaps = 39/250 (15%)
Query: 5 VTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLELVGLEMDLPVIMMCAHGSKE 64
V + A AL M+ K ++I+++ MP +D L + L+ D+P+I++ +
Sbjct: 39 VMSVDVASKALSMIEKQKKEIGLIIANIEMPHIDSHSFLNALLLK-DIPLILINPEIKTK 97
Query: 65 VVMKGVTHDACDYLTKPVRIEELKNIWQHVVRKRKNE----------------------- 101
+T AC L KP+ +++KN+WQHV K+ E
Sbjct: 98 EPSDLLTKRACFSLDKPISNDDIKNMWQHVFSKKSQELKKINITEDQENVMDKDTYQIEA 157
Query: 102 -RKDLEQSGSVEGGAQQPKPFEESDDSY----------SVNEGTSNSRKDEEEEAEKRLK 150
R +L++ + +PF ++ +Y +V T+ S E E K K
Sbjct: 158 FRANLKRQRISQASLLGRRPFIDTFSTYETFQKRKSIANVEWKTTPSYAIEIENKRKEWK 217
Query: 151 KP----RLVWSVELHQQFVSAVKELGFDKAGPKKILELMNIPGLTRENVASHLQKHRLYL 206
K + +W+ E H +F++A+ LG + PK ILE+MN P LT V SHLQK++ +
Sbjct: 218 KSVGRRKSLWNSERHMKFIAAISILGEEDFRPKSILEIMNDPNLTHRQVGSHLQKYKAQI 277
Query: 207 SRLSGVSPQQ 216
++S P+
Sbjct: 278 DQISYTLPRN 287
>sp|Q9FFH0|GLK2_ARATH Transcription activator GLK2 OS=Arabidopsis thaliana GN=GLK2 PE=2
SV=1
Length = 386
Score = 77.4 bits (189), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 47/60 (78%)
Query: 150 KKPRLVWSVELHQQFVSAVKELGFDKAGPKKILELMNIPGLTRENVASHLQKHRLYLSRL 209
KKP++ W+ ELH++FV AV++LG DKA P +ILE+MN+ LTR NVASHLQK+R + L
Sbjct: 146 KKPKVDWTPELHRKFVQAVEQLGVDKAVPSRILEIMNVKSLTRHNVASHLQKYRSHRKHL 205
>sp|Q689G6|PRR95_ORYSJ Two-component response regulator-like PRR95 OS=Oryza sativa subsp.
japonica GN=PRR95 PE=2 SV=1
Length = 623
Score = 74.3 bits (181), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 60/101 (59%), Gaps = 5/101 (4%)
Query: 2 GFSVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLELVGLEMD----LPVIMM 57
G+ V + A D+L+ D+V+++V +P M GF LL + +E D +PVIMM
Sbjct: 66 GYRVAAASDGVKAWDILKEKSFNIDLVLTEVELPLMSGFLLLSTI-MEHDACKNIPVIMM 124
Query: 58 CAHGSKEVVMKGVTHDACDYLTKPVRIEELKNIWQHVVRKR 98
++ S +V K + A D+L KP+R EL+N+WQHV RK+
Sbjct: 125 SSNDSVSMVFKCMLKGAADFLVKPIRKNELRNLWQHVWRKQ 165
>sp|Q8L500|APRR9_ARATH Two-component response regulator-like APRR9 OS=Arabidopsis thaliana
GN=APRR9 PE=2 SV=2
Length = 468
Score = 73.2 bits (178), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 58/88 (65%), Gaps = 5/88 (5%)
Query: 14 ALDMLRTNKNGYDIVISDVHMPDMDGFKLLELVGLE----MDLPVIMMCAHGSKEVVMKG 69
A ++L+ + D++++++ +P + GF LL LV +E ++PVIMM + S ++V+K
Sbjct: 72 AWEVLKEKSHNIDLILTELDLPSISGFALLALV-MEHEACKNIPVIMMSSQDSIKMVLKC 130
Query: 70 VTHDACDYLTKPVRIEELKNIWQHVVRK 97
+ A DYL KP+R ELKN+WQHV R+
Sbjct: 131 MLRGAADYLIKPMRKNELKNLWQHVWRR 158
>sp|Q6LA42|APRR5_ARATH Two-component response regulator-like APRR5 OS=Arabidopsis thaliana
GN=APRR5 PE=1 SV=2
Length = 558
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 54/89 (60%), Gaps = 5/89 (5%)
Query: 14 ALDMLRTNKNGYDIVISDVHMPDMDGFKLLELVGLEMDL----PVIMMCAHGSKEVVMKG 69
A +ML+ D+++++V +P + G+ LL L+ +E D+ PVIMM S V K
Sbjct: 85 AWEMLKGKPESVDLILTEVDLPSISGYALLTLI-MEHDICKNIPVIMMSTQDSVNTVYKC 143
Query: 70 VTHDACDYLTKPVRIEELKNIWQHVVRKR 98
+ A DYL KP+R EL+N+WQHV R++
Sbjct: 144 MLKGAADYLVKPLRRNELRNLWQHVWRRQ 172
>sp|Q9SIV3|GLK1_ARATH Transcription activator GLK1 OS=Arabidopsis thaliana GN=GLK1 PE=2
SV=2
Length = 420
Score = 70.9 bits (172), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 53/82 (64%), Gaps = 4/82 (4%)
Query: 128 YSVNEGTSNSRKDEEEEAEKRLKKPRLVWSVELHQQFVSAVKELGFDKAGPKKILELMNI 187
YS + + N+R E +K ++ W+ ELH++FV AV++LG DKA P +ILELM +
Sbjct: 134 YSSSASSKNNRISNNEGK----RKVKVDWTPELHRRFVEAVEQLGVDKAVPSRILELMGV 189
Query: 188 PGLTRENVASHLQKHRLYLSRL 209
LTR NVASHLQK+R + L
Sbjct: 190 HCLTRHNVASHLQKYRSHRKHL 211
>sp|Q5NAN5|GLK2_ORYSJ Probable transcription factor GLK2 OS=Oryza sativa subsp. japonica
GN=GLK2 PE=2 SV=1
Length = 539
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 45/60 (75%)
Query: 150 KKPRLVWSVELHQQFVSAVKELGFDKAGPKKILELMNIPGLTRENVASHLQKHRLYLSRL 209
+K ++ W+ ELH++FV AV++LG DKA P +ILELM I LTR N+ASHLQK+R + L
Sbjct: 214 RKVKVDWTPELHRRFVQAVEQLGIDKAVPSRILELMGIECLTRHNIASHLQKYRSHRKHL 273
>sp|Q5Z5I4|GLK1_ORYSJ Probable transcription factor GLK1 OS=Oryza sativa subsp. japonica
GN=GLK1 PE=2 SV=1
Length = 455
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 39/48 (81%)
Query: 156 WSVELHQQFVSAVKELGFDKAGPKKILELMNIPGLTRENVASHLQKHR 203
W+ ELH++FV AV++LG DKA P +ILE+M I LTR N+ASHLQK+R
Sbjct: 185 WTPELHRRFVQAVEQLGIDKAVPSRILEIMGIDSLTRHNIASHLQKYR 232
>sp|A2YQ93|PRR37_ORYSI Two-component response regulator-like PRR37 OS=Oryza sativa subsp.
indica GN=PRR37 PE=2 SV=2
Length = 742
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 55/98 (56%), Gaps = 3/98 (3%)
Query: 3 FSVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLELV---GLEMDLPVIMMCA 59
+ V + A L +N D+V+++V MP + G LL + + ++PVIMM +
Sbjct: 86 YEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGVSGISLLSRIMNHNICKNIPVIMMSS 145
Query: 60 HGSKEVVMKGVTHDACDYLTKPVRIEELKNIWQHVVRK 97
+ + V K ++ A D+L KP+R ELKN+WQHV R+
Sbjct: 146 NDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRR 183
>sp|Q9LKL2|APRR1_ARATH Two-component response regulator-like APRR1 OS=Arabidopsis thaliana
GN=APRR1 PE=1 SV=1
Length = 618
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Query: 3 FSVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLELVGLEMDL---PVIMMCA 59
+ VT A +D L DI+++++ +P G K+L + + DL PVIMM
Sbjct: 43 YQVTAVKSARQVIDALNAEGPDIDIILAEIDLPMAKGMKMLRYITRDKDLRRIPVIMMSR 102
Query: 60 HGSKEVVMKGVTHDACDYLTKPVRIEELKNIWQHVVRKRK 99
VV+K + A DYL KP+R EL N+W H+ R+R+
Sbjct: 103 QDEVPVVVKCLKLGAADYLVKPLRTNELLNLWTHMWRRRR 142
>sp|Q0D3B6|PRR37_ORYSJ Two-component response regulator-like PRR37 OS=Oryza sativa subsp.
japonica GN=PRR37 PE=2 SV=1
Length = 742
Score = 68.6 bits (166), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 55/98 (56%), Gaps = 3/98 (3%)
Query: 3 FSVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLELV---GLEMDLPVIMMCA 59
+ V + A L +N D+V+++V MP + G LL + + ++PVIMM +
Sbjct: 86 YEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGVSGISLLSRIMNHNICKNIPVIMMSS 145
Query: 60 HGSKEVVMKGVTHDACDYLTKPVRIEELKNIWQHVVRK 97
+ + V K ++ A D+L KP+R ELKN+WQHV R+
Sbjct: 146 NDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRR 183
>sp|Q9LVG4|APRR3_ARATH Two-component response regulator-like APRR3 OS=Arabidopsis thaliana
GN=APRR3 PE=1 SV=1
Length = 495
Score = 68.2 bits (165), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
Query: 14 ALDMLRTNKNGYDIVISDVHMPDMDGFKLLELVGLEMDL---PVIMMCAHGSKEVVMKGV 70
A +L K+ D+V+++V MP G LL + L PVIMM +H S +V K +
Sbjct: 99 AWRILEDEKSCIDLVLTEVDMPVHSGTGLLSKIMSHKTLKNIPVIMMSSHDSMVLVFKCL 158
Query: 71 THDACDYLTKPVRIEELKNIWQHVVRK 97
++ A D+L KP+R ELKN+WQHV R+
Sbjct: 159 SNGAVDFLVKPIRKNELKNLWQHVWRR 185
>sp|A2XFB7|PRR73_ORYSI Two-component response regulator-like PRR73 OS=Oryza sativa subsp.
indica GN=PRR73 PE=2 SV=2
Length = 767
Score = 68.2 bits (165), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
Query: 14 ALDMLRTNKNGYDIVISDVHMPDMDGFKLLELVG---LEMDLPVIMMCAHGSKEVVMKGV 70
A L +N D+V+++V MP + G LL + + D+PVIMM ++ S V K +
Sbjct: 116 AWQCLEDLQNHIDLVLTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCL 175
Query: 71 THDACDYLTKPVRIEELKNIWQHVVRK 97
+ A D+L KP+R ELKN+WQHV R+
Sbjct: 176 SKGAVDFLVKPIRKNELKNLWQHVWRR 202
>sp|Q10N34|PRR73_ORYSJ Two-component response regulator-like PRR73 OS=Oryza sativa subsp.
japonica GN=PRR73 PE=2 SV=1
Length = 767
Score = 68.2 bits (165), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
Query: 14 ALDMLRTNKNGYDIVISDVHMPDMDGFKLLELVG---LEMDLPVIMMCAHGSKEVVMKGV 70
A L +N D+V+++V MP + G LL + + D+PVIMM ++ S V K +
Sbjct: 116 AWQCLEDLQNHIDLVLTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCL 175
Query: 71 THDACDYLTKPVRIEELKNIWQHVVRK 97
+ A D+L KP+R ELKN+WQHV R+
Sbjct: 176 SKGAVDFLVKPIRKNELKNLWQHVWRR 202
>sp|Q6LA43|APRR2_ARATH Two-component response regulator-like APRR2 OS=Arabidopsis thaliana
GN=APRR2 PE=2 SV=2
Length = 535
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 43/58 (74%)
Query: 148 RLKKPRLVWSVELHQQFVSAVKELGFDKAGPKKILELMNIPGLTRENVASHLQKHRLY 205
+ + ++ W+ ELH++FV AV++LG D+A P +ILELM + LTR NVASHLQK R +
Sbjct: 293 KTSRKKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVGTLTRHNVASHLQKFRQH 350
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 51/102 (50%), Gaps = 3/102 (2%)
Query: 1 MGFSVTKCNRAEIALDMLRTNKNGYDIVISDVHM-PDMDGFKLLELVGLEMDLPVIMMCA 59
M + VT AL + N + I I +V+M + + FK LE + LP IM+
Sbjct: 46 MDYIVTTFTDETEALSAVVKNPESFHIAIVEVNMSAESESFKFLE--AAKDVLPTIMIST 103
Query: 60 HGSKEVVMKGVTHDACDYLTKPVRIEELKNIWQHVVRKRKNE 101
MK + A ++L KP+ E+LKNIWQHVV K N+
Sbjct: 104 DHCITTTMKCIALGAVEFLQKPLSPEKLKNIWQHVVHKAFND 145
>sp|Q9SAK5|APL_ARATH Myb family transcription factor APL OS=Arabidopsis thaliana GN=APL
PE=2 SV=2
Length = 358
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 151 KPRLVWSVELHQQFVSAVKELGF-DKAGPKKILELMNIPGLTRENVASHLQKHRL 204
KPRL W+VELH++FV AV +LG DKA PK I+ +M + GLT ++ SHLQK RL
Sbjct: 34 KPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 88
>sp|Q93WK5|APRR7_ARATH Two-component response regulator-like APRR7 OS=Arabidopsis thaliana
GN=APRR7 PE=2 SV=1
Length = 727
Score = 64.3 bits (155), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 55/98 (56%), Gaps = 3/98 (3%)
Query: 3 FSVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLELV---GLEMDLPVIMMCA 59
+ V + + A +L N DIV+++V MP + G LL + ++PVIMM +
Sbjct: 102 YEVVEASNGIQAWKVLEDLNNHIDIVLTEVIMPYLSGIGLLCKILNHKSRRNIPVIMMSS 161
Query: 60 HGSKEVVMKGVTHDACDYLTKPVRIEELKNIWQHVVRK 97
H S +V K ++ A D+L KP+R ELK +WQHV R+
Sbjct: 162 HDSMGLVFKCLSKGAVDFLVKPIRKNELKILWQHVWRR 199
>sp|P33112|SPAR_BACIU Transcriptional regulatory protein SpaR OS=Bacillus subtilis
GN=spaR PE=3 SV=1
Length = 220
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 23 NGYDIVISDVHMPDMDGFKLLELVGLEMDLPVIMMCAHGSKEVVMKGVTHDACDYLTKPV 82
GYD+++ DV MPD+DGF+L + + +D P++ + A +E ++KG+ DY+TKP
Sbjct: 43 QGYDLILLDVMMPDIDGFELCKQIRPLVDCPILFLTAKTEEEAIVKGLITGGDDYITKPF 102
Query: 83 RIEELKNIWQHVVRKRKNERKDLEQSGSVEGG 114
+ EL V + ER+D QS V G
Sbjct: 103 GVRELS---ARVNAHLRRERRDKHQSKRVISG 131
>sp|Q689G9|PRR1_ORYSJ Two-component response regulator-like PRR1 OS=Oryza sativa subsp.
japonica GN=PRR1 PE=2 SV=2
Length = 518
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Query: 2 GFSVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLELVGLEMDL---PVIMMC 58
+ VT +++L DI++++V +P FK+L+ + +L P+IMM
Sbjct: 51 SYQVTCAKSPRQVINVLNCEAGEIDIILAEVDLPVSKCFKMLKYIARNKELRHIPIIMMS 110
Query: 59 AHGSKEVVMKGVTHDACDYLTKPVRIEELKNIWQHVVRKRK 99
VV+K + A +YL KP+R+ EL N+W HV R+R+
Sbjct: 111 NRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTHVWRRRR 151
>sp|P10046|DCTD_RHILE C4-dicarboxylate transport transcriptional regulatory protein DctD
OS=Rhizobium leguminosarum GN=dctD PE=3 SV=1
Length = 448
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 56/99 (56%), Gaps = 3/99 (3%)
Query: 2 GFSVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLE-LVGLEMDLPVIMMCAH 60
GFSV+ + A+ AL L + G V++D+ MP++DG +L L G+++DLPVI+M H
Sbjct: 28 GFSVSAYDGAKAALADLPADFAGP--VVTDIRMPEIDGLQLFATLQGMDVDLPVILMTGH 85
Query: 61 GSKEVVMKGVTHDACDYLTKPVRIEELKNIWQHVVRKRK 99
G + ++ + A D++ KP + L + KR+
Sbjct: 86 GDIPMAVQAIQDGAYDFIAKPFAADRLVQSVRRASEKRR 124
>sp|P28787|NTRC_PROHU Nitrogen regulation protein NR(I) OS=Proteus hauseri GN=ntrC PE=3
SV=1
Length = 473
Score = 60.8 bits (146), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 7/110 (6%)
Query: 8 CNRAEIALDMLRT-NKNGYDIVISDVHMPDMDGFKLLELVGLEM-DLPVIMMCAHGSKEV 65
C E A D+L+ N D+++SD+ MPDMDG LL+++ + LPVI+M AH +
Sbjct: 30 CRAFEHANDVLKALNSEQPDVLLSDIRMPDMDGLSLLKIIKEQYPTLPVIIMTAHSDLDA 89
Query: 66 VMKGVTHDACDYLTKPVRIEELKNIWQHVV-----RKRKNERKDLEQSGS 110
+ A DYL KP I+E + + + +K+ N +++ QS S
Sbjct: 90 AVNAYQQGAFDYLPKPFDIDETLALIERAITHYREQKQPNNAENILQSVS 139
>sp|Q8GUN5|PHL1_ARATH Protein PHR1-LIKE 1 OS=Arabidopsis thaliana GN=PHL1 PE=1 SV=1
Length = 413
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 151 KPRLVWSVELHQQFVSAVKELG-FDKAGPKKILELMNIPGLTRENVASHLQKHR 203
K R+ W+ ELH+ FV AV +LG ++A PK +L+L+N PGLT +V SHLQK+R
Sbjct: 231 KQRMRWTPELHEAFVEAVNQLGGSERATPKAVLKLLNNPGLTIYHVKSHLQKYR 284
>sp|Q04803|PFER_PSEAE Transcriptional activator protein PfeR OS=Pseudomonas aeruginosa
(strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
GN=pfeR PE=3 SV=1
Length = 305
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 2 GFSVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLELVGLEMDLPVIMMCAHG 61
GF VT C L+ + +D+V+ D+ +P +DG LLE + E PV++M A G
Sbjct: 101 GFRVTVCGDGSHGLEA--AGREAFDLVLLDIMLPGLDGLALLESLRREQATPVMLMSALG 158
Query: 62 SKEVVMKGVTHDACDYLTKPVRIEEL 87
+++ + G T A DYL KP + EL
Sbjct: 159 AEQDRISGFTRGADDYLPKPFSLAEL 184
>sp|P13632|DCTD_RHIME C4-dicarboxylate transport transcriptional regulatory protein DctD
OS=Rhizobium meliloti (strain 1021) GN=dctD PE=1 SV=3
Length = 460
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
Query: 2 GFSVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLL-ELVGLEMDLPVIMMCAH 60
GF+V+ A AL L + G IVISD+ MP MDG L +++ L+ DLP+I++ H
Sbjct: 28 GFTVSSFASATEALAGLSADFAG--IVISDIRMPGMDGLALFRKILALDPDLPMILVTGH 85
Query: 61 GSKEVVMKGVTHDACDYLTKPVRIEELKNIWQHVVRKRK 99
G + ++ + A D++ KP + L + KR+
Sbjct: 86 GDIPMAVQAIQDGAYDFIAKPFAADRLVQSARRAEEKRR 124
>sp|Q9AE24|RPRY_BACFR Transcriptional regulatory protein RprY OS=Bacteroides fragilis
(strain YCH46) GN=rprY PE=3 SV=2
Length = 236
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 55/100 (55%), Gaps = 4/100 (4%)
Query: 22 KNGYDIVISDVHMPDMDGFKLL-ELVGLEMDLPVIMMCAHGSKEVVMKGVTHDACDYLTK 80
KN YD+ + DV MP DGF L E+ ++P+I + A KE +++G A DY+TK
Sbjct: 49 KNKYDLCVFDVMMPKKDGFTLAQEVRAANAEIPIIFLTAKTLKEDILEGFKIGADDYITK 108
Query: 81 PVRIEELKNIWQHVVRK---RKNERKDLEQSGSVEGGAQQ 117
P +EEL + ++R+ +KN+ ++ + G Q+
Sbjct: 109 PFSMEELTFRIEAILRRVRGKKNKESNVYKIGKFTFDTQK 148
>sp|Q7MM78|LUXO_VIBVY Regulatory protein LuxO OS=Vibrio vulnificus (strain YJ016) GN=luxO
PE=3 SV=2
Length = 453
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 26 DIVISDVHMPDMDGFKLLELV-GLEMDLPVIMMCAHGSKEVVMKGVTHDACDYLTKPVRI 84
D+++ D+ +PDM G +L V D+P+I M AHGS + ++ + H + D+L KP
Sbjct: 42 DLILLDLRLPDMTGMDVLHAVKASHPDVPIIFMTAHGSIDTAVEAMRHGSQDFLIKPCEA 101
Query: 85 EELKNIWQHVVRKRKNERKDLEQSGS 110
+ L+ + +RK + D + +GS
Sbjct: 102 DRLRVTVNNAIRKASKLKNDADSAGS 127
>sp|Q8CWJ5|LUXO_VIBVU Regulatory protein LuxO OS=Vibrio vulnificus (strain CMCP6) GN=luxO
PE=3 SV=2
Length = 453
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 26 DIVISDVHMPDMDGFKLLELV-GLEMDLPVIMMCAHGSKEVVMKGVTHDACDYLTKPVRI 84
D+++ D+ +PDM G +L V D+P+I M AHGS + ++ + H + D+L KP
Sbjct: 42 DLILLDLRLPDMTGMDVLHAVKASHPDVPIIFMTAHGSIDTAVEAMRHGSQDFLIKPCEA 101
Query: 85 EELKNIWQHVVRKRKNERKDLEQSGS 110
+ L+ + +RK + D + +GS
Sbjct: 102 DRLRVTVNNAIRKASKLKNDADSAGS 127
>sp|Q9C616|KAN2_ARATH Probable transcription factor KAN2 OS=Arabidopsis thaliana GN=KAN2
PE=2 SV=1
Length = 388
Score = 58.2 bits (139), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 145 AEKRLKKPRLVWSVELHQQFVSAVKELG-FDKAGPKKILELMNIPGLTRENVASHLQKHR 203
A++ ++ PR+ W+ LH +FV AV+ LG ++A PK +LELM++ LT +V SHLQ +R
Sbjct: 207 AKRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYR 266
>sp|Q9FJV5|KAN4_ARATH Probable transcription factor KAN4 OS=Arabidopsis thaliana GN=KAN4
PE=1 SV=1
Length = 276
Score = 57.8 bits (138), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 146 EKRLKKPRLVWSVELHQQFVSAVKELG-FDKAGPKKILELMNIPGLTRENVASHLQKHR 203
++ ++ PR+ W+ LH FV AV+ LG ++A PK +LELMN+ LT +V SHLQ +R
Sbjct: 100 KRSIRAPRMRWTSTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYR 158
>sp|Q0J235|ROLL9_ORYSJ Probable transcription factor RL9 OS=Oryza sativa subsp. japonica
GN=RL9 PE=2 SV=2
Length = 532
Score = 57.4 bits (137), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 133 GTSNSRKDEEEEAEKRLKKPRLVWSVELHQQFVSAVKELG-FDKAGPKKILELMNIPGLT 191
G SR + A++ ++ PR+ W+ LH +FV AV+ LG ++A PK +LELM++ LT
Sbjct: 306 GALASRFMPKLPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLT 365
Query: 192 RENVASHLQKHR 203
+V SHLQ +R
Sbjct: 366 LAHVKSHLQMYR 377
>sp|Q941I2|KAN3_ARATH Probable transcription factor KAN3 OS=Arabidopsis thaliana GN=KAN3
PE=2 SV=1
Length = 322
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 145 AEKRLKKPRLVWSVELHQQFVSAVKELG-FDKAGPKKILELMNIPGLTRENVASHLQKHR 203
A++ ++ PR+ W+ LH FV AV+ LG ++A PK +LELM++ LT +V SHLQ +R
Sbjct: 158 AKRGVRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMDVQDLTLAHVKSHLQMYR 217
>sp|Q4L8L9|HSSR_STAHJ Heme response regulator HssR OS=Staphylococcus haemolyticus (strain
JCSC1435) GN=hssR PE=3 SV=1
Length = 224
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 69/131 (52%), Gaps = 6/131 (4%)
Query: 4 SVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLELVGLEMDLPVIMMCAHGSK 63
+VT+ + E A+ L NK DI + D+ M MDGF+L +L+ + DLPVIM+ A +
Sbjct: 28 TVTQAS-GESAIAYLANNK--VDIAVVDIMMTGMDGFELCQLLKNDYDLPVIMLTARDAL 84
Query: 64 EVVMKGVTHDACDYLTKPVRIEELKNIWQHVVRKRKNERKDLEQSGSVEGGAQQPKPFEE 123
+ DY+TKP ++EL Q V+R+ + +D+ + G+V + E
Sbjct: 85 SDKERAFVSGTDDYVTKPFEVKELLFRIQAVLRRYQINSQDIIKLGNV---TLIQEYMEL 141
Query: 124 SDDSYSVNEGT 134
S DS +VN T
Sbjct: 142 SVDSKNVNLPT 152
>sp|Q93WJ9|KAN1_ARATH Transcription repressor KAN1 OS=Arabidopsis thaliana GN=KAN1 PE=1
SV=1
Length = 403
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 145 AEKRLKKPRLVWSVELHQQFVSAVKELG-FDKAGPKKILELMNIPGLTRENVASHLQKHR 203
++ ++ PR+ W+ LH +FV AV+ LG ++A PK +LELM++ LT +V SHLQ +R
Sbjct: 213 TKRSMRAPRMRWTSSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYR 272
>sp|P14375|ZRAR_ECOLI Transcriptional regulatory protein ZraR OS=Escherichia coli (strain
K12) GN=zraR PE=1 SV=2
Length = 441
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Query: 2 GFSVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLL-ELVGLEMDLPVIMMCAH 60
G++V N AL+ +R + +D+V+ DV M +MDG L E+ L +PV++M A+
Sbjct: 29 GYNVALANSGRQALEQVR--EQVFDLVLCDVRMAEMDGIATLKEIKALNPAIPVLIMTAY 86
Query: 61 GSKEVVMKGVTHDACDYLTKPVRIEELK 88
S E ++ + A DYL KP+ + L+
Sbjct: 87 SSVETAVEALKTGALDYLIKPLDFDNLQ 114
>sp|Q8X613|ZRAR_ECO57 Transcriptional regulatory protein ZraR OS=Escherichia coli O157:H7
GN=zraR PE=3 SV=1
Length = 441
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Query: 2 GFSVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLL-ELVGLEMDLPVIMMCAH 60
G++V N AL+ +R + +D+V+ DV M +MDG L E+ L +PV++M A+
Sbjct: 29 GYNVALANSGRQALEQVR--ERVFDLVLCDVRMAEMDGIATLKEIKALNPAIPVLIMTAY 86
Query: 61 GSKEVVMKGVTHDACDYLTKPVRIEELK 88
S E ++ + A DYL KP+ + L+
Sbjct: 87 SSVETAVEALKTGALDYLIKPLDFDNLQ 114
>sp|P03029|NTRC_KLEPN Nitrogen assimilation regulatory protein OS=Klebsiella pneumoniae
GN=ntrC PE=1 SV=1
Length = 469
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Query: 2 GFSVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLELVGLEMD-LPVIMMCAH 60
G S T LD L T D+++SD+ MP MDG LL+ + LPVI+M AH
Sbjct: 27 GLSCTTFESGNEVLDALTTKTP--DVLLSDIRMPGMDGLALLKQIKQRHPMLPVIIMTAH 84
Query: 61 GSKEVVMKGVTHDACDYLTKPVRIEE 86
+ + A DYL KP I+E
Sbjct: 85 SDLDAAVSAYQQGAFDYLPKPFDIDE 110
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.132 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,845,941
Number of Sequences: 539616
Number of extensions: 3689738
Number of successful extensions: 13136
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 329
Number of HSP's successfully gapped in prelim test: 416
Number of HSP's that attempted gapping in prelim test: 12452
Number of HSP's gapped (non-prelim): 841
length of query: 226
length of database: 191,569,459
effective HSP length: 113
effective length of query: 113
effective length of database: 130,592,851
effective search space: 14756992163
effective search space used: 14756992163
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 59 (27.3 bits)