Citrus Sinensis ID: 027235
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 226 | ||||||
| 6015064 | 226 | RecName: Full=Elongation factor 1-delta; | 0.995 | 0.995 | 0.797 | 2e-92 | |
| 118197456 | 230 | putative elongation factor 1-beta [Brass | 0.986 | 0.969 | 0.837 | 2e-90 | |
| 21593028 | 231 | putative elongation factor beta-1 [Arabi | 0.986 | 0.965 | 0.820 | 5e-90 | |
| 15224107 | 231 | Elongation factor 1-delta 2 [Arabidopsis | 0.986 | 0.965 | 0.820 | 7e-90 | |
| 224995910 | 233 | seed ripening regulated protein [Camelli | 1.0 | 0.969 | 0.811 | 2e-89 | |
| 356516563 | 230 | PREDICTED: elongation factor 1-delta-lik | 1.0 | 0.982 | 0.865 | 2e-89 | |
| 378464888 | 231 | translation elongation factor [Ammopipta | 1.0 | 0.978 | 0.826 | 4e-89 | |
| 297734404 | 245 | unnamed protein product [Vitis vinifera] | 1.0 | 0.922 | 0.856 | 7e-89 | |
| 225456295 | 230 | PREDICTED: elongation factor 1-delta-lik | 1.0 | 0.982 | 0.856 | 7e-89 | |
| 388519683 | 232 | unknown [Lotus japonicus] | 1.0 | 0.974 | 0.827 | 5e-88 |
| >gi|6015064|sp|P93447.3|EF1D_PIMBR RecName: Full=Elongation factor 1-delta; Short=EF-1-delta; AltName: Full=Elongation factor 1B-beta; AltName: Full=eEF-1B beta gi|1841870|gb|AAB68395.1| elongation factor 1-beta [Pimpinella brachycarpa] | Back alignment and taxonomy information |
|---|
Score = 343 bits (881), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 181/227 (79%), Positives = 206/227 (90%), Gaps = 2/227 (0%)
Query: 1 MAVAFDNVNSATGLKKLDEYLLTRSYITGYQASKDDITVYSALSKAPSSEYVNVSRWYKH 60
MAV F +++S GL+KLDEYLL+RSYI+GYQASKDD+ V++AL+K PSS+YVNVSRWY H
Sbjct: 1 MAVTFYDLSSEAGLEKLDEYLLSRSYISGYQASKDDLAVHAALAKPPSSKYVNVSRWYNH 60
Query: 61 IDALLRISGVTGEGSGVTVEGSAPVATPPVADSKA-AAPDDDDDDVDLFGEETEEEKKAA 119
++ALLRISGV+ EG GVTVEGS+ VATPPVAD+KA AA DDDDDDVDLFGEETEEEKKA+
Sbjct: 61 VEALLRISGVSAEGCGVTVEGSS-VATPPVADTKASAAEDDDDDDVDLFGEETEEEKKAS 119
Query: 120 EARAASVKASAKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVG 179
E RAA+VKAS KKKESGKSSVLLDVKPWDDETDM KLEEAVRS++M+GLLWGASKL VG
Sbjct: 120 EERAAAVKASGKKKESGKSSVLLDVKPWDDETDMTKLEEAVRSIKMDGLLWGASKLVAVG 179
Query: 180 YGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPINEYVQSCDIVAFNKI 226
YGIKKLQIMLTIVDDLVSVD L+E++L EP NEY+QSCDIVAFNKI
Sbjct: 180 YGIKKLQIMLTIVDDLVSVDDLVEDYLTAEPANEYIQSCDIVAFNKI 226
|
Source: Pimpinella brachycarpa Species: Pimpinella brachycarpa Genus: Pimpinella Family: Apiaceae Order: Apiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|118197456|gb|ABK78691.1| putative elongation factor 1-beta [Brassica rapa] | Back alignment and taxonomy information |
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| >gi|21593028|gb|AAM64977.1| putative elongation factor beta-1 [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|15224107|ref|NP_179402.1| Elongation factor 1-delta 2 [Arabidopsis thaliana] gi|13124232|sp|Q9SI20.1|EF1D2_ARATH RecName: Full=Elongation factor 1-delta 2; Short=EF-1-delta 2; AltName: Full=Elongation factor 1B-beta 2; AltName: Full=eEF-1B beta 2 gi|4874292|gb|AAD31355.1| putative elongation factor beta-1 [Arabidopsis thaliana] gi|17473804|gb|AAL38335.1| putative elongation factor 1-beta [Arabidopsis thaliana] gi|20148479|gb|AAM10130.1| putative elongation factor 1-beta [Arabidopsis thaliana] gi|20197598|gb|AAM15146.1| putative elongation factor beta-1 [Arabidopsis thaliana] gi|330251633|gb|AEC06727.1| Elongation factor 1-delta 2 [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|224995910|gb|ACN76858.1| seed ripening regulated protein [Camellia oleifera] | Back alignment and taxonomy information |
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| >gi|356516563|ref|XP_003526963.1| PREDICTED: elongation factor 1-delta-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|378464888|gb|AFC01201.1| translation elongation factor [Ammopiptanthus mongolicus] | Back alignment and taxonomy information |
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| >gi|297734404|emb|CBI15651.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|225456295|ref|XP_002283673.1| PREDICTED: elongation factor 1-delta-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|388519683|gb|AFK47903.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 226 | ||||||
| TAIR|locus:2053144 | 231 | AT2G18110 [Arabidopsis thalian | 0.986 | 0.965 | 0.585 | 1.1e-62 | |
| TAIR|locus:2009807 | 260 | eEF-1Bb1 "eukaryotic elongatio | 0.986 | 0.857 | 0.580 | 2.3e-62 | |
| TAIR|locus:2177038 | 228 | AT5G12110 [Arabidopsis thalian | 0.384 | 0.381 | 0.850 | 7.7e-48 | |
| TAIR|locus:2180806 | 224 | AT5G19510 [Arabidopsis thalian | 0.384 | 0.388 | 0.816 | 6.8e-47 | |
| FB|FBgn0028737 | 222 | Ef1beta "Elongation factor 1 b | 0.371 | 0.378 | 0.678 | 2.8e-42 | |
| UNIPROTKB|Q5E983 | 225 | EEF1B "Elongation factor 1-bet | 0.371 | 0.373 | 0.643 | 2.4e-37 | |
| UNIPROTKB|F1NYA9 | 224 | EEF1B2 "Uncharacterized protei | 0.371 | 0.375 | 0.632 | 3.1e-37 | |
| UNIPROTKB|P24534 | 225 | EEF1B2 "Elongation factor 1-be | 0.371 | 0.373 | 0.632 | 4e-37 | |
| ZFIN|ZDB-GENE-030131-7310 | 225 | eef1b2 "eukaryotic translation | 0.371 | 0.373 | 0.655 | 4e-37 | |
| UNIPROTKB|Q9YGQ1 | 225 | EEF1B "Elongation factor 1-bet | 0.371 | 0.373 | 0.632 | 6.4e-37 |
| TAIR|locus:2053144 AT2G18110 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 640 (230.4 bits), Expect = 1.1e-62, P = 1.1e-62
Identities = 134/229 (58%), Positives = 148/229 (64%)
Query: 4 AFDNVNSATGLKKLDEYLLTRSYITGYQASKDDITVYSALSKAPSSEYVNVSRWYKHIDA 63
AF N+NS +GLKKLDE+LLTRSYITGYQASKDDITV++ALSK P+SE+VNVSRW+ HIDA
Sbjct: 3 AFPNLNSGSGLKKLDEHLLTRSYITGYQASKDDITVFTALSKPPTSEFVNVSRWFNHIDA 62
Query: 64 LLRIXXXXXXXXXXXXXXXAP-----VATX-XXXXXXXXXXXXXXXXXXLFGXXXXXXXX 117
LLRI +P VAT LFG
Sbjct: 63 LLRISGVSAEGSGVIVEGSSPITEEAVATPPAADSKDTAAEEEDDDDVDLFGEETEEEKK 122
Query: 118 XXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAP 177
VL+D+KPWDDETDMKKLEEAVRS+QMEGL WGASKL P
Sbjct: 123 AAEERAASVKASTKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSIQMEGLFWGASKLVP 182
Query: 178 VGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPINEYVQSCDIVAFNKI 226
VGYGIKKL IM TIVDDLVS+DT+IEE L EPINEYVQSCDIVAFNKI
Sbjct: 183 VGYGIKKLHIMCTIVDDLVSIDTMIEEQLTVEPINEYVQSCDIVAFNKI 231
|
|
| TAIR|locus:2009807 eEF-1Bb1 "eukaryotic elongation factor 1B beta 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2177038 AT5G12110 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2180806 AT5G19510 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| FB|FBgn0028737 Ef1beta "Elongation factor 1 beta" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q5E983 EEF1B "Elongation factor 1-beta" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1NYA9 EEF1B2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| UNIPROTKB|P24534 EEF1B2 "Elongation factor 1-beta" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-030131-7310 eef1b2 "eukaryotic translation elongation factor 1 beta 2" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q9YGQ1 EEF1B "Elongation factor 1-beta" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| AT2G18110 | elongation factor 1-beta, putative / EF-1-beta, putative; elongation factor 1-beta, putative / EF-1-beta, putative; FUNCTIONS IN- translation elongation factor activity; INVOLVED IN- translational elongation; LOCATED IN- eukaryotic translation elongation factor 1 complex; EXPRESSED IN- male gametophyte, pollen tube; EXPRESSED DURING- L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s- Translation elongation factor EF1B/ribosomal protein S6 (InterPro-IPR014717), Translation elongation factor EF1B, beta and delta chains, guanine nucleotide exchange (InterPro-IPR [...] (231 aa) | ||||||||||
(Arabidopsis thaliana) | |||||||||||
| AT1G57720 | • | • | • | 0.922 | |||||||
| AT1G09640 | • | • | • | 0.663 | |||||||
| AT2G17360 | • | 0.546 | |||||||||
| AT5G39850 | • | 0.545 | |||||||||
| AT5G23900 | • | 0.524 | |||||||||
| AT1G30230 | • | • | • | • | 0.523 | ||||||
| ACT11 | • | 0.504 | |||||||||
| AT2G44860 | • | 0.457 | |||||||||
| AT3G04840 | • | 0.428 | |||||||||
| AT3G62870 | • | 0.428 |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 226 | |||
| cd00292 | 88 | cd00292, EF1B, Elongation factor 1 beta (EF1B) gua | 2e-34 | |
| pfam00736 | 87 | pfam00736, EF1_GNE, EF-1 guanine nucleotide exchan | 2e-30 | |
| smart00888 | 88 | smart00888, EF1_GNE, EF-1 guanine nucleotide excha | 8e-27 | |
| cd10308 | 82 | cd10308, GST_C_eEF1b_like, Glutathione S-transfera | 2e-19 | |
| COG2092 | 88 | COG2092, EFB1, Translation elongation factor EF-1b | 8e-15 | |
| cd10310 | 73 | cd10310, GST_C_CysRS_N, Glutathione S-transferase | 4e-12 | |
| cd10289 | 82 | cd10289, GST_C_AaRS_like, Glutathione S-transferas | 8e-10 | |
| cd10305 | 101 | cd10305, GST_C_AIMP3, Glutathione S-transferase C- | 1e-08 | |
| cd10306 | 87 | cd10306, GST_C_GluRS_N, Glutathione S-transferase | 3e-08 | |
| cd10309 | 81 | cd10309, GST_C_GluProRS_N, Glutathione S-transfera | 6e-07 | |
| PLN02907 | 722 | PLN02907, PLN02907, glutamate-tRNA ligase | 2e-06 | |
| cd03181 | 123 | cd03181, GST_C_EF1Bgamma_like, Glutathione S-trans | 2e-06 | |
| cd03182 | 116 | cd03182, GST_C_GTT2_like, C-terminal, alpha helica | 0.001 |
| >gnl|CDD|238181 cd00292, EF1B, Elongation factor 1 beta (EF1B) guanine nucleotide exchange domain | Back alignment and domain information |
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Score = 118 bits (297), Expect = 2e-34
Identities = 45/92 (48%), Positives = 60/92 (65%), Gaps = 4/92 (4%)
Query: 135 SGKSSVLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQIMLTIVDD 194
KS V+L VKPWDDE D+ +LEE +R++ M+GLLWG SKL P+ +G+K LQI + DD
Sbjct: 1 MAKSLVVLKVKPWDDEVDLDELEEKIRAILMDGLLWGKSKLEPIAFGLKALQIYCVVEDD 60
Query: 195 LVSVDTLIEEHLLEEPINEYVQSCDIVAFNKI 226
D L E + E + VQS D+ AFNK+
Sbjct: 61 EGGTDELEEA--ISE--EDGVQSVDVEAFNKL 88
|
EF1B catalyzes the exchange of GDP bound to the G-protein, EF1A, for GTP, an important step in the elongation cycle of the protein biosynthesis. EF1A binds to and delivers the aminoacyl tRNA to the ribosome. The guanine nucleotide exchange domain of EF1B, which is the alpha subunit in yeast, is responsible for the catalysis of this exchange reaction. Length = 88 |
| >gnl|CDD|201421 pfam00736, EF1_GNE, EF-1 guanine nucleotide exchange domain | Back alignment and domain information |
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| >gnl|CDD|214886 smart00888, EF1_GNE, EF-1 guanine nucleotide exchange domain | Back alignment and domain information |
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| >gnl|CDD|198341 cd10308, GST_C_eEF1b_like, Glutathione S-transferase C-terminal-like, alpha helical domain of eukaryotic translation Elongation Factor 1 beta | Back alignment and domain information |
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| >gnl|CDD|225003 COG2092, EFB1, Translation elongation factor EF-1beta [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
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| >gnl|CDD|198343 cd10310, GST_C_CysRS_N, Glutathione S-transferase C-terminal-like, alpha helical domain of Cysteinyl-tRNA synthetase from higher eukaryotes | Back alignment and domain information |
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| >gnl|CDD|198322 cd10289, GST_C_AaRS_like, Glutathione S-transferase C-terminal-like, alpha helical domain of various Aminoacyl-tRNA synthetases and similar domains | Back alignment and domain information |
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| >gnl|CDD|198338 cd10305, GST_C_AIMP3, Glutathione S-transferase C-terminal-like, alpha helical domain of Aminoacyl tRNA synthetase complex-Interacting Multifunctional Protein 3 | Back alignment and domain information |
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| >gnl|CDD|198339 cd10306, GST_C_GluRS_N, Glutathione S-transferase C-terminal-like, alpha helical domain of Glutamyl-tRNA synthetase | Back alignment and domain information |
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| >gnl|CDD|198342 cd10309, GST_C_GluProRS_N, Glutathione S-transferase C-terminal-like, alpha helical domain of bifunctional Glutamyl-Prolyl-tRNA synthetase | Back alignment and domain information |
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| >gnl|CDD|215492 PLN02907, PLN02907, glutamate-tRNA ligase | Back alignment and domain information |
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| >gnl|CDD|198290 cd03181, GST_C_EF1Bgamma_like, Glutathione S-transferase C-terminal-like, alpha helical domain of the Gamma subunit of Elongation Factor 1B and similar proteins | Back alignment and domain information |
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| >gnl|CDD|198291 cd03182, GST_C_GTT2_like, C-terminal, alpha helical domain of GTT2-like Glutathione S-transferases | Back alignment and domain information |
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Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 226 | |||
| KOG1668 | 231 | consensus Elongation factor 1 beta/delta chain [Tr | 100.0 | |
| cd00292 | 88 | EF1B Elongation factor 1 beta (EF1B) guanine nucle | 100.0 | |
| PRK00435 | 88 | ef1B elongation factor 1-beta; Validated | 100.0 | |
| PF00736 | 89 | EF1_GNE: EF-1 guanine nucleotide exchange domain; | 100.0 | |
| TIGR00489 | 88 | aEF-1_beta translation elongation factor aEF-1 bet | 99.96 | |
| COG2092 | 88 | EFB1 Translation elongation factor EF-1beta [Trans | 99.94 | |
| PF00043 | 95 | GST_C: Glutathione S-transferase, C-terminal domai | 98.99 | |
| PF14497 | 99 | GST_C_3: Glutathione S-transferase, C-terminal dom | 98.85 | |
| cd03200 | 96 | GST_C_JTV1 GST_C family, JTV-1 subfamily; composed | 98.81 | |
| cd03198 | 134 | GST_C_CLIC GST_C family, Chloride Intracellular Ch | 98.81 | |
| cd03206 | 100 | GST_C_7 GST_C family, unknown subfamily 7; compose | 98.79 | |
| cd03188 | 114 | GST_C_Beta GST_C family, Class Beta subfamily; GST | 98.79 | |
| cd03207 | 103 | GST_C_8 GST_C family, unknown subfamily 8; compose | 98.79 | |
| cd03204 | 111 | GST_C_GDAP1 GST_C family, Ganglioside-induced diff | 98.78 | |
| cd03189 | 119 | GST_C_GTT1_like GST_C family, Saccharomyces cerevi | 98.78 | |
| cd03180 | 110 | GST_C_2 GST_C family, unknown subfamily 2; compose | 98.75 | |
| cd03177 | 118 | GST_C_Delta_Epsilon GST_C family, Class Delta and | 98.73 | |
| cd03196 | 115 | GST_C_5 GST_C family, unknown subfamily 5; compose | 98.73 | |
| cd03182 | 117 | GST_C_GTT2_like GST_C family, Saccharomyces cerevi | 98.71 | |
| PF13410 | 69 | GST_C_2: Glutathione S-transferase, C-terminal dom | 98.71 | |
| cd03187 | 118 | GST_C_Phi GST_C family, Class Phi subfamily; compo | 98.71 | |
| cd03190 | 142 | GST_C_ECM4_like GST_C family, ECM4-like subfamily; | 98.67 | |
| cd03186 | 107 | GST_C_SspA GST_N family, Stringent starvation prot | 98.67 | |
| cd03191 | 121 | GST_C_Zeta GST_C family, Class Zeta subfamily; GST | 98.66 | |
| cd03209 | 121 | GST_C_Mu GST_C family, Class Mu subfamily; GSTs ar | 98.65 | |
| cd03202 | 124 | GST_C_etherase_LigE GST_C family, Beta etherase Li | 98.65 | |
| cd03185 | 126 | GST_C_Tau GST_C family, Class Tau subfamily; GSTs | 98.62 | |
| cd03208 | 137 | GST_C_Alpha GST_C family, Class Alpha subfamily; G | 98.6 | |
| cd03193 | 88 | GST_C_Metaxin GST_C family, Metaxin subfamily; com | 98.6 | |
| PRK13972 | 215 | GSH-dependent disulfide bond oxidoreductase; Provi | 98.59 | |
| PLN02473 | 214 | glutathione S-transferase | 98.57 | |
| cd03183 | 126 | GST_C_Theta GST_C family, Class Theta subfamily; c | 98.57 | |
| cd03178 | 113 | GST_C_Ure2p_like GST_C family, Ure2p-like subfamil | 98.55 | |
| cd03210 | 126 | GST_C_Pi GST_C family, Class Pi subfamily; GSTs ar | 98.54 | |
| PLN02907 | 722 | glutamate-tRNA ligase | 98.53 | |
| cd03179 | 105 | GST_C_1 GST_C family, unknown subfamily 1; compose | 98.52 | |
| cd03201 | 121 | GST_C_DHAR GST_C family, Dehydroascorbate Reductas | 98.51 | |
| PRK10542 | 201 | glutathionine S-transferase; Provisional | 98.5 | |
| PLN02395 | 215 | glutathione S-transferase | 98.49 | |
| TIGR01262 | 210 | maiA maleylacetoacetate isomerase. Maleylacetoacet | 98.49 | |
| PRK10387 | 210 | glutaredoxin 2; Provisional | 98.49 | |
| cd03184 | 124 | GST_C_Omega GST_C family, Class Omega subfamily; G | 98.48 | |
| cd00299 | 100 | GST_C_family Glutathione S-transferase (GST) famil | 98.48 | |
| cd03181 | 123 | GST_C_EFB1gamma GST_C family, Gamma subunit of Elo | 98.47 | |
| PTZ00057 | 205 | glutathione s-transferase; Provisional | 98.46 | |
| COG0625 | 211 | Gst Glutathione S-transferase [Posttranslational m | 98.45 | |
| PRK09481 | 211 | sspA stringent starvation protein A; Provisional | 98.42 | |
| cd03203 | 120 | GST_C_Lambda GST_C family, Class Lambda subfamily; | 98.4 | |
| cd03197 | 149 | GST_C_mPGES2 GST_C family; microsomal Prostaglandi | 98.38 | |
| TIGR00862 | 236 | O-ClC intracellular chloride channel protein. Thes | 98.36 | |
| PRK11752 | 264 | putative S-transferase; Provisional | 98.34 | |
| PRK10357 | 202 | putative glutathione S-transferase; Provisional | 98.29 | |
| PLN02378 | 213 | glutathione S-transferase DHAR1 | 98.29 | |
| cd03192 | 104 | GST_C_Sigma_like GST_C family, Class Sigma_like; c | 98.28 | |
| cd03194 | 114 | GST_C_3 GST_C family, unknown subfamily 3; compose | 98.24 | |
| TIGR02182 | 209 | GRXB Glutaredoxin, GrxB family. This model include | 98.23 | |
| KOG0867 | 226 | consensus Glutathione S-transferase [Posttranslati | 98.23 | |
| PLN02817 | 265 | glutathione dehydrogenase (ascorbate) | 98.11 | |
| cd03205 | 98 | GST_C_6 GST_C family, unknown subfamily 6; compose | 98.11 | |
| cd03211 | 126 | GST_C_Metaxin2 GST_C family, Metaxin subfamily, Me | 98.0 | |
| cd03195 | 114 | GST_C_4 GST_C family, unknown subfamily 4; compose | 97.95 | |
| cd03212 | 137 | GST_C_Metaxin1_3 GST_C family, Metaxin subfamily, | 97.94 | |
| PF10587 | 28 | EF-1_beta_acid: Eukaryotic elongation factor 1 bet | 97.71 | |
| PRK15113 | 214 | glutathione S-transferase; Provisional | 97.66 | |
| COG0435 | 324 | ECM4 Predicted glutathione S-transferase [Posttran | 97.44 | |
| KOG1147 | 712 | consensus Glutamyl-tRNA synthetase [Translation, r | 96.87 | |
| KOG2903 | 319 | consensus Predicted glutathione S-transferase [Pos | 96.85 | |
| KOG1422 | 221 | consensus Intracellular Cl- channel CLIC, contains | 96.81 | |
| KOG0868 | 217 | consensus Glutathione S-transferase [Posttranslati | 96.76 | |
| KOG0406 | 231 | consensus Glutathione S-transferase [Posttranslati | 96.49 | |
| KOG4420 | 325 | consensus Uncharacterized conserved protein (Gangl | 96.14 | |
| KOG4244 | 281 | consensus Failed axon connections (fax) protein/gl | 96.02 | |
| KOG1695 | 206 | consensus Glutathione S-transferase [Posttranslati | 95.62 | |
| KOG3029 | 370 | consensus Glutathione S-transferase-related protei | 93.57 | |
| PF04399 | 132 | Glutaredoxin2_C: Glutaredoxin 2, C terminal domain | 92.19 | |
| KOG3027 | 257 | consensus Mitochondrial outer membrane protein Met | 91.25 | |
| cd03199 | 128 | GST_C_GRX2 GST_C family, Glutaredoxin 2 (GRX2) sub | 89.47 | |
| KOG3028 | 313 | consensus Translocase of outer mitochondrial membr | 85.08 |
| >KOG1668 consensus Elongation factor 1 beta/delta chain [Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-65 Score=443.59 Aligned_cols=222 Identities=55% Similarity=0.870 Sum_probs=187.8
Q ss_pred ccccCCcccHHHHHHHHhhcCCCCeeecCCCCHHHHHHHhhhccCC-CCCCccHHHHHHHHHhhhCcc--CCCCCCCCce
Q 027235 2 AVAFDNVNSATGLKKLDEYLLTRSYITGYQASKDDITVYSALSKAP-SSEYVNVSRWYKHIDALLRIS--GVTGEGSGVT 78 (226)
Q Consensus 2 ~~~f~dl~s~~~L~~Ln~~La~rsYl~G~~~SiADiavf~~L~~~p-~~~yPnl~RWy~~I~s~p~~~--~~pg~~~~~~ 78 (226)
+|.|+|+++..+++.||.+|++++|+.|+++|.+|+.+|.++...| ...|+|..|||++|.++-... .++|......
T Consensus 1 ~m~ftdl~~~~glk~l~~sLA~ks~~~g~~~s~edv~vf~al~~ep~s~~~v~~~~w~~~l~a~~~~~~~~~~G~~~~~~ 80 (231)
T KOG1668|consen 1 PMAFTDLKSPAGLKKLNKSLAEKSYIEGYQLSKEDVVVFAALGVEPQSARLVNAERWYSKLEALLRLLAKLLAGVSKALP 80 (231)
T ss_pred CCcccccCchhhhhhhhHhhhcccCCCCCCcccccceeehhcccCcchhhhhHHHHHHHHHHHHHHHHhhcccccccccc
Confidence 4899999999999999999999999999999999999999998777 469999999999999987532 4445444433
Q ss_pred ecCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcHHHHH----HHHHHHHHHHhhhcc--cccccceeEEEeecCCCccc
Q 027235 79 VEGSAPVATPPVADSKAAAPDDDDDDVDLFGEETEEEKK----AAEARAASVKASAKK--KESGKSSVLLDVKPWDDETD 152 (226)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~ddd~dlfg~~~ee~~~----~~~~~~~~~~~~~~~--~~~~Ks~v~l~vkP~d~etd 152 (226)
..+++..++|++.+++++++.+||||+||||||+||+++ .+++|.++|+.++.+ .+++||+|+|+|||||+|||
T Consensus 81 ~~~~~~~a~~~~~~~a~~ae~dddDDiDLFGsd~EEEd~eA~~~~eErla~y~~kka~k~~~iakssvlLdvkpwddeTd 160 (231)
T KOG1668|consen 81 AHGAPSVAAPPAVEAAAAAEADDDDDVDLFGSDDEEEDEEAARIREERLAAYAAKKAKKPPPIAKSSVLLDVKPWDDETD 160 (231)
T ss_pred cCCCCcCCCCccccccccccccccccccccCCccccchhHHHHHHhhhhhhhhHHhccCCcccccceEEeecCCcCCCCC
Confidence 333332223232333555667899999999998776543 456677778764443 35999999999999999999
Q ss_pred HHHHHHHHhhhccCCceEeeeeeeeeeeeeeeEEEEEEEeCCCCChhHHHhhhhcccccCCCcceeeeeeeccC
Q 027235 153 MKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPINEYVQSCDIVAFNKI 226 (226)
Q Consensus 153 l~~l~~~vr~i~~~gl~wg~~k~~pv~fGikkLqi~~vv~Dd~v~~d~l~e~~~~~~~~e~~VqS~di~~~~k~ 226 (226)
|.+|+++||+|+|+||+||++|++|||||||||||+|||+||+||+|.|+|+ |..+|++||||||++||||
T Consensus 161 m~~~e~~vrsi~~~gl~wgasklvpvGygikKlqi~~vveddkvs~D~l~e~---i~~~e~~Vqs~di~afnki 231 (231)
T KOG1668|consen 161 MKELEECVRSIEMDGLVWGASKLVPVGYGIKKLQIQCVVEDDKVSIDDLIEE---ITKFEDHVQSVDIAAFNKI 231 (231)
T ss_pred HHHHHHHHHHhhhccceeccccccccccceeeEEEEEEEEcCccccchhHHH---hhhhhcceeeehhhhcccC
Confidence 9999999999999999999999999999999999999999999999999999 7889999999999999997
|
|
| >cd00292 EF1B Elongation factor 1 beta (EF1B) guanine nucleotide exchange domain | Back alignment and domain information |
|---|
| >PRK00435 ef1B elongation factor 1-beta; Validated | Back alignment and domain information |
|---|
| >PF00736 EF1_GNE: EF-1 guanine nucleotide exchange domain; InterPro: IPR014038 Translation elongation factors are responsible for two main processes during protein synthesis on the ribosome [, , ] | Back alignment and domain information |
|---|
| >TIGR00489 aEF-1_beta translation elongation factor aEF-1 beta | Back alignment and domain information |
|---|
| >COG2092 EFB1 Translation elongation factor EF-1beta [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >PF00043 GST_C: Glutathione S-transferase, C-terminal domain; InterPro: IPR004046 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione | Back alignment and domain information |
|---|
| >PF14497 GST_C_3: Glutathione S-transferase, C-terminal domain; PDB: 3AY8_A 2UZ8_B 1V2A_C 2HNL_A 2YV9_B 3H1N_A 3FR6_A 1Q4J_B 1PA3_B 1OKT_B | Back alignment and domain information |
|---|
| >cd03200 GST_C_JTV1 GST_C family, JTV-1 subfamily; composed of uncharacterized proteins with similarity to the translation product of the human JTV-1 gene | Back alignment and domain information |
|---|
| >cd03198 GST_C_CLIC GST_C family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin, and similar proteins | Back alignment and domain information |
|---|
| >cd03206 GST_C_7 GST_C family, unknown subfamily 7; composed of uncharacterized proteins with similarity to GSTs | Back alignment and domain information |
|---|
| >cd03188 GST_C_Beta GST_C family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress | Back alignment and domain information |
|---|
| >cd03207 GST_C_8 GST_C family, unknown subfamily 8; composed of uncharacterized bacterial proteins with similarity to GSTs | Back alignment and domain information |
|---|
| >cd03204 GST_C_GDAP1 GST_C family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells | Back alignment and domain information |
|---|
| >cd03189 GST_C_GTT1_like GST_C family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S | Back alignment and domain information |
|---|
| >cd03180 GST_C_2 GST_C family, unknown subfamily 2; composed of uncharacterized bacterial proteins, with similarity to GSTs | Back alignment and domain information |
|---|
| >cd03177 GST_C_Delta_Epsilon GST_C family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress | Back alignment and domain information |
|---|
| >cd03196 GST_C_5 GST_C family, unknown subfamily 5; composed of uncharacterized bacterial proteins with similarity to GSTs | Back alignment and domain information |
|---|
| >cd03182 GST_C_GTT2_like GST_C family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S | Back alignment and domain information |
|---|
| >PF13410 GST_C_2: Glutathione S-transferase, C-terminal domain; PDB: 4DEJ_H 3IC8_A 2JL4_A 2V6K_B 3CBU_B 1JLW_B 3F6D_B 3G7I_A 3F63_A 3G7J_B | Back alignment and domain information |
|---|
| >cd03187 GST_C_Phi GST_C family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins | Back alignment and domain information |
|---|
| >cd03190 GST_C_ECM4_like GST_C family, ECM4-like subfamily; composed of predominantly uncharacterized and taxonomically diverse proteins with similarity to the translation product of the Saccharomyces cerevisiae gene ECM4 | Back alignment and domain information |
|---|
| >cd03186 GST_C_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E | Back alignment and domain information |
|---|
| >cd03191 GST_C_Zeta GST_C family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress | Back alignment and domain information |
|---|
| >cd03209 GST_C_Mu GST_C family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress | Back alignment and domain information |
|---|
| >cd03202 GST_C_etherase_LigE GST_C family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor | Back alignment and domain information |
|---|
| >cd03185 GST_C_Tau GST_C family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress | Back alignment and domain information |
|---|
| >cd03208 GST_C_Alpha GST_C family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress | Back alignment and domain information |
|---|
| >cd03193 GST_C_Metaxin GST_C family, Metaxin subfamily; composed of metaxins and related proteins | Back alignment and domain information |
|---|
| >PRK13972 GSH-dependent disulfide bond oxidoreductase; Provisional | Back alignment and domain information |
|---|
| >PLN02473 glutathione S-transferase | Back alignment and domain information |
|---|
| >cd03183 GST_C_Theta GST_C family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase | Back alignment and domain information |
|---|
| >cd03178 GST_C_Ure2p_like GST_C family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs | Back alignment and domain information |
|---|
| >cd03210 GST_C_Pi GST_C family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress | Back alignment and domain information |
|---|
| >PLN02907 glutamate-tRNA ligase | Back alignment and domain information |
|---|
| >cd03179 GST_C_1 GST_C family, unknown subfamily 1; composed of uncharacterized bacterial proteins, with similarity to GSTs | Back alignment and domain information |
|---|
| >cd03201 GST_C_DHAR GST_C family, Dehydroascorbate Reductase (DHAR) subfamily; composed of plant-specific DHARs, monomeric enzymes catalyzing the reduction of DHA into ascorbic acid (AsA) using glutathione as the reductant | Back alignment and domain information |
|---|
| >PRK10542 glutathionine S-transferase; Provisional | Back alignment and domain information |
|---|
| >PLN02395 glutathione S-transferase | Back alignment and domain information |
|---|
| >TIGR01262 maiA maleylacetoacetate isomerase | Back alignment and domain information |
|---|
| >PRK10387 glutaredoxin 2; Provisional | Back alignment and domain information |
|---|
| >cd03184 GST_C_Omega GST_C family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress | Back alignment and domain information |
|---|
| >cd00299 GST_C_family Glutathione S-transferase (GST) family, C-terminal alpha helical domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress | Back alignment and domain information |
|---|
| >cd03181 GST_C_EFB1gamma GST_C family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis | Back alignment and domain information |
|---|
| >PTZ00057 glutathione s-transferase; Provisional | Back alignment and domain information |
|---|
| >COG0625 Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PRK09481 sspA stringent starvation protein A; Provisional | Back alignment and domain information |
|---|
| >cd03203 GST_C_Lambda GST_C family, Class Lambda subfamily; composed of plant-specific class Lambda GSTs | Back alignment and domain information |
|---|
| >cd03197 GST_C_mPGES2 GST_C family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2 | Back alignment and domain information |
|---|
| >TIGR00862 O-ClC intracellular chloride channel protein | Back alignment and domain information |
|---|
| >PRK11752 putative S-transferase; Provisional | Back alignment and domain information |
|---|
| >PRK10357 putative glutathione S-transferase; Provisional | Back alignment and domain information |
|---|
| >PLN02378 glutathione S-transferase DHAR1 | Back alignment and domain information |
|---|
| >cd03192 GST_C_Sigma_like GST_C family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi, and Alpha | Back alignment and domain information |
|---|
| >cd03194 GST_C_3 GST_C family, unknown subfamily 3; composed of uncharacterized proteins with similarity to GSTs | Back alignment and domain information |
|---|
| >TIGR02182 GRXB Glutaredoxin, GrxB family | Back alignment and domain information |
|---|
| >KOG0867 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PLN02817 glutathione dehydrogenase (ascorbate) | Back alignment and domain information |
|---|
| >cd03205 GST_C_6 GST_C family, unknown subfamily 6; composed of uncharacterized bacterial proteins with similarity to GSTs | Back alignment and domain information |
|---|
| >cd03211 GST_C_Metaxin2 GST_C family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait | Back alignment and domain information |
|---|
| >cd03195 GST_C_4 GST_C family, unknown subfamily 4; composed of uncharacterized proteins with similarity to GSTs | Back alignment and domain information |
|---|
| >cd03212 GST_C_Metaxin1_3 GST_C family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins | Back alignment and domain information |
|---|
| >PF10587 EF-1_beta_acid: Eukaryotic elongation factor 1 beta central acidic region; InterPro: IPR018940 Translation elongation factors are responsible for two main processes during protein synthesis on the ribosome [, , ] | Back alignment and domain information |
|---|
| >PRK15113 glutathione S-transferase; Provisional | Back alignment and domain information |
|---|
| >COG0435 ECM4 Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG1147 consensus Glutamyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >KOG2903 consensus Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG1422 consensus Intracellular Cl- channel CLIC, contains GST domain [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >KOG0868 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG0406 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG4420 consensus Uncharacterized conserved protein (Ganglioside-induced differentiation associated protein 1, GDAP1) [Function unknown] | Back alignment and domain information |
|---|
| >KOG4244 consensus Failed axon connections (fax) protein/glutathione S-transferase-like protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG1695 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG3029 consensus Glutathione S-transferase-related protein [General function prediction only] | Back alignment and domain information |
|---|
| >PF04399 Glutaredoxin2_C: Glutaredoxin 2, C terminal domain; InterPro: IPR007494 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors | Back alignment and domain information |
|---|
| >KOG3027 consensus Mitochondrial outer membrane protein Metaxin 2, Metaxin 1-binding protein [Cell wall/membrane/envelope biogenesis; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >cd03199 GST_C_GRX2 GST_C family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E | Back alignment and domain information |
|---|
| >KOG3028 consensus Translocase of outer mitochondrial membrane complex, subunit TOM37/Metaxin 1 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 226 | ||||
| 1b64_A | 91 | Solution Structure Of The Guanine Nucleotide Exchan | 2e-25 | ||
| 1ije_B | 90 | Nucleotide Exchange Intermediates In The Eef1a-eef1 | 7e-18 | ||
| 1f60_B | 94 | Crystal Structure Of The Yeast Elongation Factor Co | 8e-18 | ||
| 2b7b_B | 94 | Yeast Guanine Nucleotide Exchange Factor Eef1balpha | 3e-17 |
| >pdb|1B64|A Chain A, Solution Structure Of The Guanine Nucleotide Exchange Factor Domain From Human Elongation Factor-One Beta, Nmr, 20 Structures Length = 91 | Back alignment and structure |
|
| >pdb|1IJE|B Chain B, Nucleotide Exchange Intermediates In The Eef1a-eef1ba Complex Length = 90 | Back alignment and structure |
| >pdb|1F60|B Chain B, Crystal Structure Of The Yeast Elongation Factor Complex Eef1a:eef1ba Length = 94 | Back alignment and structure |
| >pdb|2B7B|B Chain B, Yeast Guanine Nucleotide Exchange Factor Eef1balpha K205a Mutant In Complex With Eef1a And Gdp Length = 94 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 226 | |||
| 1f60_B | 94 | Elongation factor EEF1BA; protein-protein complex, | 4e-45 | |
| 1b64_A | 91 | Elongation factor 1-beta; guanine nucleotide excha | 1e-41 | |
| 1gh8_A | 89 | Translation elongation factor 1BETA; alpha-beta sa | 1e-22 | |
| 2yy3_A | 91 | Elongation factor 1-beta; structural genomics, NPP | 2e-14 | |
| 2hra_A | 209 | Glutamyl-tRNA synthetase, cytoplasmic; GST-fold, l | 2e-12 | |
| 2uz8_A | 174 | Eukaryotic translation elongation factor 1 epsilon | 6e-08 | |
| 1nhy_A | 219 | EF-1-gamma 1, elongation factor 1-gamma 1; protein | 3e-04 |
| >1f60_B Elongation factor EEF1BA; protein-protein complex, translation; 1.67A {Saccharomyces cerevisiae} SCOP: d.58.12.1 PDB: 1g7c_B* 2b7c_B 2b7b_B 1ije_B* 1ijf_B* Length = 94 | Back alignment and structure |
|---|
Score = 144 bits (365), Expect = 4e-45
Identities = 45/96 (46%), Positives = 64/96 (66%), Gaps = 3/96 (3%)
Query: 131 KKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQIMLT 190
K + KS V LDVKPWDDET+++++ V++++MEGL WGA + P+G+GIKKLQI
Sbjct: 2 PAKPAAKSIVTLDVKPWDDETNLEEMVANVKAIEMEGLTWGAHQFIPIGFGIKKLQINCV 61
Query: 191 IVDDLVSVDTLIEEHLLEEPINEYVQSCDIVAFNKI 226
+ DD VS+D L + E ++VQS DI A K+
Sbjct: 62 VEDDKVSLDDLQQS---IEEDEDHVQSTDIAAMQKL 94
|
| >1b64_A Elongation factor 1-beta; guanine nucleotide exchange factor, G-protein, translation elongation; NMR {Homo sapiens} SCOP: d.58.12.1 Length = 91 | Back alignment and structure |
|---|
| >1gh8_A Translation elongation factor 1BETA; alpha-beta sandwich, gene regulation, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus} SCOP: d.58.12.1 Length = 89 | Back alignment and structure |
|---|
| >2yy3_A Elongation factor 1-beta; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 2.50A {Pyrococcus horikoshii} Length = 91 | Back alignment and structure |
|---|
| >2hra_A Glutamyl-tRNA synthetase, cytoplasmic; GST-fold, ligase; 1.90A {Saccharomyces cerevisiae} PDB: 2hrk_A 2hsm_A Length = 209 | Back alignment and structure |
|---|
| >2uz8_A Eukaryotic translation elongation factor 1 epsilon-1; protein biosynthesis, aminoacyl-tRNA synthetase, GST, nuclear protein, RNA-binding protein; HET: MSE; 2.0A {Homo sapiens} Length = 174 | Back alignment and structure |
|---|
| >1nhy_A EF-1-gamma 1, elongation factor 1-gamma 1; protein synthesis, GST-like, translation; 3.00A {Saccharomyces cerevisiae} SCOP: a.45.1.1 c.47.1.5 Length = 219 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 226 | |||
| 1f60_B | 94 | Elongation factor EEF1BA; protein-protein complex, | 100.0 | |
| 1b64_A | 91 | Elongation factor 1-beta; guanine nucleotide excha | 100.0 | |
| 1gh8_A | 89 | Translation elongation factor 1BETA; alpha-beta sa | 100.0 | |
| 2yy3_A | 91 | Elongation factor 1-beta; structural genomics, NPP | 100.0 | |
| 2hqt_A | 124 | GU4 nucleic-binding protein 1; GST-fold, biosynthe | 99.2 | |
| 2hra_A | 209 | Glutamyl-tRNA synthetase, cytoplasmic; GST-fold, l | 98.93 | |
| 3m8n_A | 225 | Possible glutathione S-transferase; PSI-II, struct | 98.87 | |
| 4hi7_A | 228 | GI20122; GST, glutathione S-transferase, enzyme fu | 98.86 | |
| 3vk9_A | 216 | Glutathione S-transferase delta; glutathione bindi | 98.85 | |
| 3m3m_A | 210 | Glutathione S-transferase; PSI-II, structural geno | 98.82 | |
| 3ic8_A | 310 | Uncharacterized GST-like proteinprotein; glutathio | 98.79 | |
| 4gci_A | 211 | Glutathione S-transferase; GST, enzyme function in | 98.77 | |
| 2dsa_A | 203 | Glutathione S-transferase; HET: GSH HPX; 2.10A {Bu | 98.75 | |
| 2x64_A | 207 | Glutathione-S-transferase; detoxification enzyme; | 98.75 | |
| 1pmt_A | 203 | PMGST, GST B1-1, glutathione transferase; glutathi | 98.74 | |
| 1n2a_A | 201 | Glutathione S-transferase; HET: GTS; 1.90A {Escher | 98.74 | |
| 3ein_A | 209 | GST class-theta, glutathione S-transferase 1-1; de | 98.74 | |
| 3lsz_A | 225 | Glutathione S-transferase; xenobiotic, biodegradat | 98.74 | |
| 2pvq_A | 201 | Glutathione S-transferase; xenobiotics detoxificat | 98.74 | |
| 2cvd_A | 198 | Glutathione-requiring prostaglandin D synthase; gl | 98.73 | |
| 2uz8_A | 174 | Eukaryotic translation elongation factor 1 epsilon | 98.73 | |
| 4glt_A | 225 | Glutathione S-transferase-like protein; structural | 98.73 | |
| 4hz2_A | 230 | Glutathione S-transferase domain; glutathione,enzy | 98.72 | |
| 1f2e_A | 201 | Glutathione S-transferase; GST complexed with glut | 98.72 | |
| 1pn9_A | 209 | GST class-delta, glutathione S-transferase 1-6; pr | 98.72 | |
| 1v2a_A | 210 | Glutathione transferase GST1-6; glutathione S-tran | 98.72 | |
| 3lyp_A | 215 | Stringent starvation protein A; structural genomic | 98.72 | |
| 1r5a_A | 218 | Glutathione transferase; glutathione S-transferase | 98.72 | |
| 4gf0_A | 215 | Glutathione S-transferase; GST, enzyme function in | 98.72 | |
| 1nhy_A | 219 | EF-1-gamma 1, elongation factor 1-gamma 1; protein | 98.71 | |
| 3f6d_A | 219 | Adgstd4-4, glutathione transferase GST1-4; HET: GT | 98.7 | |
| 3ibh_A | 233 | GST-II, saccharomyces cerevisiae GTT2; glutathione | 98.69 | |
| 3gx0_A | 215 | GST-like protein YFCG; transferase, glutathione, g | 98.68 | |
| 4hz4_A | 217 | Glutathione-S-transferase; enzyme function initiat | 98.68 | |
| 2c4j_A | 218 | Glutathione S-transferase MU 2; glutathione transf | 98.68 | |
| 3ay8_A | 216 | Glutathione S-transferase; GST fold, GST binding, | 98.68 | |
| 1gsu_A | 219 | GST, CGSTM1-1, class-MU glutathione S-transferase; | 98.67 | |
| 3gtu_B | 224 | Glutathione S-transferase; conjugation, detoxifica | 98.66 | |
| 1gnw_A | 211 | Glutathione S-transferase; herbicide detoxificatio | 98.66 | |
| 3lxz_A | 229 | Glutathione S-transferase family protein; structur | 98.65 | |
| 3ik7_A | 222 | Glutathione S-transferase A4; human GST A4-4, enzy | 98.65 | |
| 1oe8_A | 211 | Glutathione S-transferase; schistosomiasis, detoxi | 98.64 | |
| 3iso_A | 218 | Putative glutathione transferase; GST; HET: GSH; 1 | 98.64 | |
| 3m0f_A | 213 | Uncharacterized protein GST_N; PSI-2, NYSGXRC, glu | 98.64 | |
| 2fhe_A | 216 | GST, glutathione S-transferase; transferase-substr | 98.64 | |
| 3niv_A | 222 | Glutathione S-transferase; structural genomics, PS | 98.63 | |
| 2imi_A | 221 | Epsilon-class glutathione S-transferase; HET: GSH; | 98.63 | |
| 4hoj_A | 210 | REGF protein; GST, glutathione S-transferase, enzy | 98.63 | |
| 4ikh_A | 244 | Glutathione S-transferase; enzyme function initiat | 98.62 | |
| 1dug_A | 234 | Chimera of glutathione S-transferase-synthetic lin | 98.62 | |
| 3n5o_A | 235 | Glutathione transferase; seattle structural genomi | 98.61 | |
| 1axd_A | 209 | Glutathione S-transferase I; transferase, herbicid | 98.61 | |
| 2on7_A | 206 | Nagst-1, Na glutathione S-transferase 1; hookworm; | 98.61 | |
| 1tu7_A | 208 | Glutathione S-transferase 2; HET: GSH; 1.50A {Onch | 98.61 | |
| 4exj_A | 238 | Uncharacterized protein; transferase-like protein, | 98.6 | |
| 2hnl_A | 225 | Glutathione S-transferase 1; prostaglandin synthas | 98.6 | |
| 1tw9_A | 206 | Glutathione S-transferase 2; 1.71A {Heligmosomoide | 98.6 | |
| 2gsq_A | 202 | Squid GST, glutathione S-transferase; squid digest | 98.6 | |
| 2cz2_A | 223 | Maleylacetoacetate isomerase; structural genomics, | 98.6 | |
| 3uar_A | 227 | Glutathione S-transferase; GSH binding site; HET: | 98.59 | |
| 1e6b_A | 221 | Glutathione S-transferase; 1.65A {Arabidopsis thal | 98.59 | |
| 2vo4_A | 219 | 2,4-D inducible glutathione S-transferase; herbici | 98.58 | |
| 1zl9_A | 207 | GST class-sigma, glutathione S-transferase 5; glut | 98.58 | |
| 1yy7_A | 213 | SSPA, stringent starvation protein A; GST fold, tr | 98.58 | |
| 3ubk_A | 242 | Glutathione transferase; GSH binding; 1.95A {Lepto | 98.58 | |
| 3cbu_A | 214 | Probable GST-related protein; thioredoxin fold, GS | 98.58 | |
| 2v6k_A | 214 | Maleylpyruvate isomerase; glutathione-S-transferas | 98.57 | |
| 3qav_A | 243 | RHO-class glutathione S-transferase; cytosol; 2.10 | 98.57 | |
| 3lyk_A | 216 | Stringent starvation protein A homolog; structural | 98.57 | |
| 2ycd_A | 230 | Glutathione S-transferase; SOIL bacteria, herbicid | 98.57 | |
| 2on5_A | 206 | Nagst-2, Na glutathione S-transferase 2; hookworm; | 98.56 | |
| 1gwc_A | 230 | Glutathione S-transferase TSI-1; herbicide detoxif | 98.56 | |
| 3tou_A | 226 | Glutathione S-transferase protein; GSH binding sit | 98.56 | |
| 2a2r_A | 210 | Glutathione S-transferase P; detoxification, nitri | 98.56 | |
| 1aw9_A | 216 | Glutathione S-transferase III; herbicide detoxific | 98.56 | |
| 1yq1_A | 208 | Glutathione S-transferase; nematoda, structural ge | 98.55 | |
| 4g10_A | 265 | Glutathione S-transferase homolog; thioredoxin fol | 98.54 | |
| 3r2q_A | 202 | Uncharacterized GST-like protein YIBF; transferase | 98.53 | |
| 4iel_A | 229 | Glutathione S-transferase, N-terminal domain PROT; | 98.52 | |
| 1b8x_A | 280 | Protein (AML-1B); nuclear matrix targeting signal | 98.52 | |
| 1okt_A | 211 | Glutathione S-transferase; GST; 1.9A {Plasmodium f | 98.52 | |
| 1k3y_A | 221 | GSTA1-1, glutathione S-transferase A1; S-hexyl glu | 98.52 | |
| 1oyj_A | 231 | Glutathione S-transferase; herbicide detoxificatio | 98.51 | |
| 1k0m_A | 241 | CLIC1, NCC27, chloride intracellular channel prote | 98.51 | |
| 4fqu_A | 313 | Putative glutathione transferase; glutathionyl-hyd | 98.51 | |
| 2ws2_A | 204 | NU-class GST, glutathione S-transferase; parasite, | 98.5 | |
| 1vf1_A | 229 | Glutathione S-transferase 3; detoxification; HET: | 98.5 | |
| 3fy7_A | 250 | Chloride intracellular channel protein 3; GST, glu | 98.5 | |
| 1b48_A | 221 | GST, mgsta4-4, protein (glutathione S-transferase) | 98.5 | |
| 3c8e_A | 288 | YGHU, glutathione S-transferase homologue; glutath | 98.5 | |
| 3q18_A | 239 | GSTO-2, glutathione S-transferase omega-2; glutath | 98.49 | |
| 4g0i_A | 328 | Protein YQJG; glutathionyl-hydroquinone reductase, | 98.48 | |
| 3vln_A | 241 | GSTO-1, glutathione S-transferase omega-1; GST fol | 98.48 | |
| 3rbt_A | 246 | Glutathione transferase O1; glutathione S-transfer | 98.47 | |
| 1m0u_A | 249 | GST2 gene product; flight muscle protein, sigma, t | 98.47 | |
| 4ecj_A | 244 | Glutathione S-transferase; transferase-like protei | 98.46 | |
| 4dej_A | 231 | Glutathione S-transferase related protein; transfe | 98.46 | |
| 2wb9_A | 211 | Glutathione transferase sigma class; thioredoxin f | 98.46 | |
| 3h1n_A | 252 | Probable glutathione S-transferase; APC84167, bord | 98.45 | |
| 1bg5_A | 254 | MAB, fusion protein of alpha-Na,K-ATPase with glut | 98.44 | |
| 1ljr_A | 244 | HGST T2-2, glutathione S-transferase; HET: GSH; 3. | 98.43 | |
| 2c3n_A | 247 | Glutathione S-transferase theta 1; glutathione tra | 98.43 | |
| 3m1g_A | 362 | Putative glutathione S-transferase; ECM4-like subf | 98.42 | |
| 2r4v_A | 247 | XAP121, chloride intracellular channel protein 2; | 98.41 | |
| 1z9h_A | 290 | Membrane-associated prostaglandin E synthase-2; me | 98.38 | |
| 2ahe_A | 267 | Chloride intracellular channel protein 4; glutathi | 98.38 | |
| 3bby_A | 215 | Uncharacterized GST-like protein YFCF; NP_416804.1 | 98.37 | |
| 2yv7_A | 260 | CG10997-PA, LD46306P, CLIC; dmclic, chloride ION c | 98.32 | |
| 3ir4_A | 218 | Glutaredoxin 2; glutathione, IDP00895, structural | 98.31 | |
| 3ppu_A | 352 | Glutathione-S-transferase; GST fold; HET: GSH; 2.3 | 98.3 | |
| 2yv9_A | 291 | Chloride intracellular channel EXC-4; chloride ION | 98.27 | |
| 1k0d_A | 260 | URE2 protein; nitrate assimilation, structural gen | 98.2 | |
| 4id0_A | 214 | Glutathione S-transferase-like protein YIBF; GST, | 98.16 | |
| 4ags_A | 471 | Thiol-dependent reductase 1; transferase, leishman | 98.13 | |
| 4ags_A | 471 | Thiol-dependent reductase 1; transferase, leishman | 97.97 | |
| 2fno_A | 248 | AGR_PAT_752P; thioredoxin fold, GST C-terminal dom | 97.96 | |
| 4akg_A | 2695 | Glutathione S-transferase class-MU 26 kDa isozyme | 97.79 | |
| 4f03_A | 253 | Glutathione transferase; GST fold; 1.80A {Phaneroc | 97.26 | |
| 2hsn_A | 160 | Methionyl-tRNA synthetase, cytoplasmic; protein co | 93.87 | |
| 3bpd_A | 100 | Uncharacterized protein; heptamer, Mg+2 ION, PSI-2 | 82.58 |
| >1f60_B Elongation factor EEF1BA; protein-protein complex, translation; 1.67A {Saccharomyces cerevisiae} SCOP: d.58.12.1 PDB: 1g7c_B* 2b7c_B 2b7b_B 1ije_B* 1ijf_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-41 Score=255.38 Aligned_cols=92 Identities=49% Similarity=0.802 Sum_probs=88.7
Q ss_pred ccccccceeEEEeecCCCcccHHHHHHHHhhhccCCceEeeeeeeeeeeeeeeEEEEEEEeCCCCChhHHHhhhhccccc
Q 027235 132 KKESGKSSVLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPI 211 (226)
Q Consensus 132 ~~~~~Ks~v~l~vkP~d~etdl~~l~~~vr~i~~~gl~wg~~k~~pv~fGikkLqi~~vv~Dd~v~~d~l~e~~~~~~~~ 211 (226)
||+++||+++|+|||||+||||++|+++||+++|+||.||+++++|||||||||||+|+|+|++||||+|+|+ |++|
T Consensus 3 ~k~~~ks~v~l~VkP~d~etDl~~L~~~Vr~i~~~Gl~wg~~k~~piafGlkkL~i~~vveDd~~~tD~lee~---i~~~ 79 (94)
T 1f60_B 3 AKPAAKSIVTLDVKPWDDETNLEEMVANVKAIEMEGLTWGAHQFIPIGFGIKKLQINCVVEDDKVSLDDLQQS---IEED 79 (94)
T ss_dssp --CCCEEEEEEEEEESSTTSCHHHHHHHHHTCCCTTEEEEEEEEEEEETTEEEEEEEEEEETTTCCHHHHHHH---HHTC
T ss_pred CCceeeEEEEEEEccCCCCcCHHHHHHHHHHhCcCCcEEEEEEEEEEeeeeEEEEEEEEEECCccChHHHHHH---HHhc
Confidence 4679999999999999999999999999999999999999999999999999999999999999999999999 8999
Q ss_pred CCCcceeeeeeeccC
Q 027235 212 NEYVQSCDIVAFNKI 226 (226)
Q Consensus 212 e~~VqS~di~~~~k~ 226 (226)
|++||||||++||||
T Consensus 80 ed~VqSvdI~~~~ki 94 (94)
T 1f60_B 80 EDHVQSTDIAAMQKL 94 (94)
T ss_dssp TTTEEEEEEEEEEEC
T ss_pred cCceeEEEEEEEEcC
Confidence 999999999999997
|
| >1b64_A Elongation factor 1-beta; guanine nucleotide exchange factor, G-protein, translation elongation; NMR {Homo sapiens} SCOP: d.58.12.1 | Back alignment and structure |
|---|
| >1gh8_A Translation elongation factor 1BETA; alpha-beta sandwich, gene regulation, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus} SCOP: d.58.12.1 | Back alignment and structure |
|---|
| >2yy3_A Elongation factor 1-beta; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 2.50A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
| >2hqt_A GU4 nucleic-binding protein 1; GST-fold, biosynthetic protein, RNA binding; 1.90A {Saccharomyces cerevisiae} SCOP: a.45.1.2 PDB: 2hrk_B 2hsm_B 2hsn_B | Back alignment and structure |
|---|
| >2hra_A Glutamyl-tRNA synthetase, cytoplasmic; GST-fold, ligase; 1.90A {Saccharomyces cerevisiae} PDB: 2hrk_A 2hsm_A | Back alignment and structure |
|---|
| >3m8n_A Possible glutathione S-transferase; PSI-II, structural genomics, protein structure initiative, nysgxrc; 2.04A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
| >4hi7_A GI20122; GST, glutathione S-transferase, enzyme function initiative, structural genomics, unknown function; HET: GSH; 1.25A {Drosophila mojavensis} | Back alignment and structure |
|---|
| >3vk9_A Glutathione S-transferase delta; glutathione binding; 2.00A {Bombyx mori} | Back alignment and structure |
|---|
| >3m3m_A Glutathione S-transferase; PSI-II, structural genomics, protein structure initiative, N SGX research center for structural genomics; HET: GSH; 1.75A {Pseudomonas fluorescens} | Back alignment and structure |
|---|
| >3ic8_A Uncharacterized GST-like proteinprotein; glutathione, transferase, PSI, MCSG, structural genomics; 2.40A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
| >4gci_A Glutathione S-transferase; GST, enzyme function initiative, structural genomics; HET: GSH; 1.50A {Yersinia pestis} PDB: 4g9h_A* | Back alignment and structure |
|---|
| >2dsa_A Glutathione S-transferase; HET: GSH HPX; 2.10A {Burkholderia xenovorans} PDB: 2gdr_A* | Back alignment and structure |
|---|
| >2x64_A Glutathione-S-transferase; detoxification enzyme; HET: GSH; 2.30A {Xylella fastidiosa} | Back alignment and structure |
|---|
| >1pmt_A PMGST, GST B1-1, glutathione transferase; glutathione-conjugating, A putative oxidoreduct; HET: GSH; 2.50A {Proteus mirabilis} SCOP: a.45.1.1 c.47.1.5 PDB: 2pmt_A* | Back alignment and structure |
|---|
| >1n2a_A Glutathione S-transferase; HET: GTS; 1.90A {Escherichia coli} SCOP: a.45.1.1 c.47.1.5 PDB: 1a0f_A* | Back alignment and structure |
|---|
| >3ein_A GST class-theta, glutathione S-transferase 1-1; delta-class GST; HET: GSH; 1.13A {Drosophila melanogaster} PDB: 3mak_A* 3f6f_A 3gh6_A* 1jlv_A* | Back alignment and structure |
|---|
| >3lsz_A Glutathione S-transferase; xenobiotic, biodegradative metabolism, PSI2, NYSGXRC, structural genomics, protein structure initiative; HET: GSH; 1.70A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
| >2pvq_A Glutathione S-transferase; xenobiotics detoxification, H-site; HET: GSH; 1.80A {Ochrobactrum anthropi} PDB: 2nto_A* | Back alignment and structure |
|---|
| >2cvd_A Glutathione-requiring prostaglandin D synthase; glutathione-S-transferase, isomerase; HET: GSH HQL; 1.45A {Homo sapiens} SCOP: a.45.1.1 c.47.1.5 PDB: 1iyi_A* 1v40_A* 1iyh_A* 3vi5_A* 3vi7_A* 2vcq_A* 2vcw_A* 2vcx_A* 2vcz_A* 2vd0_A* 2vd1_A* 3kxo_A* 3ee2_A* 1pd2_1* | Back alignment and structure |
|---|
| >2uz8_A Eukaryotic translation elongation factor 1 epsilon-1; protein biosynthesis, aminoacyl-tRNA synthetase, GST, nuclear protein, RNA-binding protein; HET: MSE; 2.0A {Homo sapiens} | Back alignment and structure |
|---|
| >4glt_A Glutathione S-transferase-like protein; structural genomics, function initiative, EFI; HET: GSH; 2.20A {Methylobacillus flagellatus} | Back alignment and structure |
|---|
| >4hz2_A Glutathione S-transferase domain; glutathione,enzyme function initiative; HET: GSH; 1.50A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
| >1f2e_A Glutathione S-transferase; GST complexed with glutathione, thioredoxin superfamily fold transferase; HET: GSH; 2.30A {Sphingomonas paucimobilis} SCOP: a.45.1.1 c.47.1.5 | Back alignment and structure |
|---|
| >1pn9_A GST class-delta, glutathione S-transferase 1-6; protein inhibitor complex; HET: GTX; 2.00A {Anopheles gambiae} SCOP: a.45.1.1 c.47.1.5 | Back alignment and structure |
|---|
| >1v2a_A Glutathione transferase GST1-6; glutathione S-transferase, detoxification, xenobiotics; HET: GTS; 2.15A {Anopheles dirus} SCOP: a.45.1.1 c.47.1.5 | Back alignment and structure |
|---|
| >3lyp_A Stringent starvation protein A; structural genomics, GST-superfamily, SSPA, stringent starva protein A homolog, PSI-2; 1.60A {Pseudomonas fluorescens} PDB: 3mdk_A | Back alignment and structure |
|---|
| >1r5a_A Glutathione transferase; glutathione S-transferase, GST, GSH, mosquito, detoxification, xenobiotics; HET: GTS; 2.50A {Anopheles cracens} SCOP: a.45.1.1 c.47.1.5 | Back alignment and structure |
|---|
| >4gf0_A Glutathione S-transferase; GST, enzyme function initiative, EFI, structural genomics; HET: GSH; 1.75A {Sulfitobacter} | Back alignment and structure |
|---|
| >1nhy_A EF-1-gamma 1, elongation factor 1-gamma 1; protein synthesis, GST-like, translation; 3.00A {Saccharomyces cerevisiae} SCOP: a.45.1.1 c.47.1.5 | Back alignment and structure |
|---|
| >3f6d_A Adgstd4-4, glutathione transferase GST1-4; HET: GTX; 1.70A {Anopheles dirus} PDB: 3f63_A* 1jlw_A* 3g7i_A* 3g7j_A* | Back alignment and structure |
|---|
| >3ibh_A GST-II, saccharomyces cerevisiae GTT2; glutathione S-transferase, transferase; HET: GSH; 2.10A {Saccharomyces cerevisiae} PDB: 3erf_A* 3erg_A* | Back alignment and structure |
|---|
| >3gx0_A GST-like protein YFCG; transferase, glutathione, glutathione disulfide, disulfide bond oxidoreductase; HET: GDS; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
| >4hz4_A Glutathione-S-transferase; enzyme function initiative; 1.62A {Actinobacillus pleuropneumoniae} | Back alignment and structure |
|---|
| >2c4j_A Glutathione S-transferase MU 2; glutathione transferase, multigene family; HET: GSO; 1.35A {Homo sapiens} SCOP: a.45.1.1 c.47.1.5 PDB: 1xw5_A* 1ykc_A* 2ab6_A* 2gtu_A 3gtu_A 3gur_A* 1hna_A* 1hnb_A* 1hnc_A* 1xw6_A* 1xwk_A* 1yj6_A* 2f3m_A* 2dc5_A 1gtu_A 4gtu_A 6gsu_A* 6gsv_A* 6gsw_A* 2gst_A* ... | Back alignment and structure |
|---|
| >3ay8_A Glutathione S-transferase; GST fold, GST binding, cytosolic; 2.10A {Bombyx mori} | Back alignment and structure |
|---|
| >1gsu_A GST, CGSTM1-1, class-MU glutathione S-transferase; detoxification enzyme, S-hexyl glutathione; HET: GTX; 1.94A {Gallus gallus} SCOP: a.45.1.1 c.47.1.5 PDB: 1c72_A* | Back alignment and structure |
|---|
| >3gtu_B Glutathione S-transferase; conjugation, detoxification, cytosolic, heterodimer; 2.80A {Homo sapiens} SCOP: a.45.1.1 c.47.1.5 | Back alignment and structure |
|---|
| >1gnw_A Glutathione S-transferase; herbicide detoxification; HET: GTX; 2.20A {Arabidopsis thaliana} SCOP: a.45.1.1 c.47.1.5 PDB: 1bx9_A* | Back alignment and structure |
|---|
| >3lxz_A Glutathione S-transferase family protein; structural genomics, PP0183, PSI-2, protein structure initiative; 1.76A {Pseudomonas putida} PDB: 3pr8_A* | Back alignment and structure |
|---|
| >3ik7_A Glutathione S-transferase A4; human GST A4-4, enzyme, cytoplasm, polymorphism; HET: BOB; 1.97A {Homo sapiens} PDB: 1gum_A 1gul_A* | Back alignment and structure |
|---|
| >1oe8_A Glutathione S-transferase; schistosomiasis, detoxifying enzyme, prostaglandin D2 synthase, vaccine candidate; HET: GSH; 1.65A {Schistosoma haematobium} SCOP: a.45.1.1 c.47.1.5 PDB: 1oe7_A* 2c80_A* 2ca8_A* 2f8f_A* 2c8u_A 2caq_A* 2cai_A* 1u3i_A* | Back alignment and structure |
|---|
| >3iso_A Putative glutathione transferase; GST; HET: GSH; 1.90A {Clonorchis sinensis} | Back alignment and structure |
|---|
| >3m0f_A Uncharacterized protein GST_N; PSI-2, NYSGXRC, glutathione, structural genomics, protein structure initiative; HET: GSH; 1.60A {Pseudomonas fluorescens} PDB: 3lxt_A* | Back alignment and structure |
|---|
| >2fhe_A GST, glutathione S-transferase; transferase-substrate complex; HET: GSH; 2.30A {Fasciola hepatica} SCOP: a.45.1.1 c.47.1.5 PDB: 2wrt_A 1fhe_A* | Back alignment and structure |
|---|
| >3niv_A Glutathione S-transferase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.30A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
| >2imi_A Epsilon-class glutathione S-transferase; HET: GSH; 1.40A {Anopheles gambiae} PDB: 2il3_A* 2imk_A* | Back alignment and structure |
|---|
| >4hoj_A REGF protein; GST, glutathione S-transferase, enzyme function initiative, structural genomics, transferase; HET: GSH; 1.40A {Neisseria gonorrhoeae} | Back alignment and structure |
|---|
| >4ikh_A Glutathione S-transferase; enzyme function initiative, EFI, structural genomics; HET: GSH; 2.10A {Pseudomonas protegens} | Back alignment and structure |
|---|
| >1dug_A Chimera of glutathione S-transferase-synthetic linker-C-terminal fibrinogen gamma...; gamma chain integrin fragment; HET: GSH; 1.80A {Schistosoma japonicum} SCOP: a.45.1.1 c.47.1.5 PDB: 1gne_A* 3qmz_T 1y6e_A 1m9a_A* 1gtb_A* 1gta_A* 1m99_A* 1m9b_A* 1ua5_A* 1u87_A* 1u88_A* 3crt_A* 3cru_A* 3d0z_A* | Back alignment and structure |
|---|
| >3n5o_A Glutathione transferase; seattle structural genomics center for infectious disease, S GST, pathogenic fungus, coccidioidomycosis; HET: GSH; 1.85A {Coccidioides immitis} PDB: 3lg6_A* | Back alignment and structure |
|---|
| >1axd_A Glutathione S-transferase I; transferase, herbicide detoxification, transferase-transfera inhibitor complex; HET: GGL CYW; 2.50A {Zea mays} SCOP: a.45.1.1 c.47.1.5 PDB: 1bye_A* | Back alignment and structure |
|---|
| >2on7_A Nagst-1, Na glutathione S-transferase 1; hookworm; 2.40A {Necator americanus} | Back alignment and structure |
|---|
| >1tu7_A Glutathione S-transferase 2; HET: GSH; 1.50A {Onchocerca volvulus} SCOP: a.45.1.1 c.47.1.5 PDB: 1tu8_A* | Back alignment and structure |
|---|
| >4exj_A Uncharacterized protein; transferase-like protein, transcription regulation, transfer structural genomics; 1.64A {Lodderomyces elongisporus nrrl yb-4239} | Back alignment and structure |
|---|
| >2hnl_A Glutathione S-transferase 1; prostaglandin synthase, river BLI onchocerca volvulus, immune modulation; HET: GSH; 2.00A {Onchocerca volvulus} | Back alignment and structure |
|---|
| >1tw9_A Glutathione S-transferase 2; 1.71A {Heligmosomoides polygyrus} SCOP: a.45.1.1 c.47.1.5 | Back alignment and structure |
|---|
| >2gsq_A Squid GST, glutathione S-transferase; squid digestive gland, sigma class; HET: GBI; 2.20A {Ommastrephes sloani} SCOP: a.45.1.1 c.47.1.5 PDB: 1gsq_A* | Back alignment and structure |
|---|
| >2cz2_A Maleylacetoacetate isomerase; structural genomics, GST, GSTZ1-1, NPPSFA, national project protein structural and functional analyses; HET: GSH; 1.40A {Mus musculus} PDB: 2cz3_A 1fw1_A* | Back alignment and structure |
|---|
| >3uar_A Glutathione S-transferase; GSH binding site; HET: GSH; 2.60A {Methylococcus capsulatus} PDB: 3uap_A* | Back alignment and structure |
|---|
| >1e6b_A Glutathione S-transferase; 1.65A {Arabidopsis thaliana} SCOP: a.45.1.1 c.47.1.5 | Back alignment and structure |
|---|
| >2vo4_A 2,4-D inducible glutathione S-transferase; herbicide, TAU class GST, S-(P-nitrobenzyl- glutathione); HET: GTB 4NM; 1.75A {Glycine max} PDB: 3fhs_A* | Back alignment and structure |
|---|
| >1zl9_A GST class-sigma, glutathione S-transferase 5; glutathione transferase, C.elegans; HET: GSH; 2.01A {Caenorhabditis elegans} | Back alignment and structure |
|---|
| >1yy7_A SSPA, stringent starvation protein A; GST fold, transcription; HET: CIT; 2.02A {Yersinia pestis} | Back alignment and structure |
|---|
| >3ubk_A Glutathione transferase; GSH binding; 1.95A {Leptospira interrogans serovar lai} PDB: 3ubl_A* | Back alignment and structure |
|---|
| >3cbu_A Probable GST-related protein; thioredoxin fold, GST C-terminal domain-like fold, structura genomics, joint center for structural genomics; 2.05A {Ralstonia eutropha} | Back alignment and structure |
|---|
| >2v6k_A Maleylpyruvate isomerase; glutathione-S-transferase, GST, plasmid, bacterial, biodegradation, fumaryl pyruvate; HET: TGG; 1.3A {Ralstonia SP} PDB: 2jl4_A* | Back alignment and structure |
|---|
| >3qav_A RHO-class glutathione S-transferase; cytosol; 2.10A {Laternula elliptica} PDB: 3qaw_A* | Back alignment and structure |
|---|
| >3lyk_A Stringent starvation protein A homolog; structural genomics, GST-superfamily, SSPA, PSI-2, protein structure initiative; 2.10A {Haemophilus influenzae} | Back alignment and structure |
|---|
| >2ycd_A Glutathione S-transferase; SOIL bacteria, herbicide detoxification; HET: GTB; 1.40A {Agrobacterium tumefaciens} PDB: 3lq7_A | Back alignment and structure |
|---|
| >2on5_A Nagst-2, Na glutathione S-transferase 2; hookworm; HET: GSH; 1.90A {Necator americanus} | Back alignment and structure |
|---|
| >1gwc_A Glutathione S-transferase TSI-1; herbicide detoxification, plant, TAU class; HET: GTX; 2.25A {Aegilops tauschii} SCOP: a.45.1.1 c.47.1.5 | Back alignment and structure |
|---|
| >3tou_A Glutathione S-transferase protein; GSH binding site, GSH; HET: GSH; 1.75A {Ralstonia solanacearum} PDB: 3tot_A* | Back alignment and structure |
|---|
| >2a2r_A Glutathione S-transferase P; detoxification, nitric oxide carrier, S- nitrosoglutathione; HET: MES GSN; 1.40A {Homo sapiens} SCOP: a.45.1.1 c.47.1.5 PDB: 11gs_A* 12gs_A* 14gs_A* 16gs_A* 18gs_A* 21gs_A* 13gs_A* 2a2s_A* 3dd3_A* 3dgq_A* 3n9j_A* 3pgt_A* 1pgt_A* 2pgt_A* 4pgt_A* 22gs_A* 17gs_A* 3gus_A* 10gs_A* 1aqv_A* ... | Back alignment and structure |
|---|
| >1aw9_A Glutathione S-transferase III; herbicide detoxification; 2.20A {Zea mays} SCOP: a.45.1.1 c.47.1.5 | Back alignment and structure |
|---|
| >1yq1_A Glutathione S-transferase; nematoda, structural genomics, PSI, protein structure initiative; 3.00A {Caenorhabditis elegans} | Back alignment and structure |
|---|
| >4g10_A Glutathione S-transferase homolog; thioredoxin fold; HET: MSE GSH; 1.20A {Sphingomonas paucimobilis} | Back alignment and structure |
|---|
| >3r2q_A Uncharacterized GST-like protein YIBF; transferase, glutathione; HET: GSH; 1.05A {Escherichia coli} | Back alignment and structure |
|---|
| >4iel_A Glutathione S-transferase, N-terminal domain PROT; GST, glutathione S-transferase, enzyme function initiative, structural genomics; HET: GSH; 1.60A {Burkholderia ambifaria} | Back alignment and structure |
|---|
| >1b8x_A Protein (AML-1B); nuclear matrix targeting signal protein, signal protein; 2.70A {Escherichia coli} SCOP: a.45.1.1 c.47.1.5 | Back alignment and structure |
|---|
| >1okt_A Glutathione S-transferase; GST; 1.9A {Plasmodium falciparum} SCOP: a.45.1.1 c.47.1.5 PDB: 1pa3_A 1q4j_A* 3fr9_A* 3frc_A* 2aaw_A* 3fr6_A 3fr3_A* | Back alignment and structure |
|---|
| >1k3y_A GSTA1-1, glutathione S-transferase A1; S-hexyl glutatione, water structu transferase; HET: GTX; 1.30A {Homo sapiens} SCOP: a.45.1.1 c.47.1.5 PDB: 1gsf_A* 1guh_A* 1gsd_A* 1k3o_A 1k3l_A* 1pl1_A* 1pkz_A 1pkw_A* 2r6k_A* 1gse_A* 3u6v_A 1usb_A* 1ydk_A* 3q74_A 3ktl_A* 1pl2_A* 2r3x_A* 1xwg_A 3l0h_A* 1ags_A* ... | Back alignment and structure |
|---|
| >1oyj_A Glutathione S-transferase; herbicide detoxification; HET: GSH; 1.95A {Oryza sativa} SCOP: a.45.1.1 c.47.1.5 | Back alignment and structure |
|---|
| >1k0m_A CLIC1, NCC27, chloride intracellular channel protein 1; glutathione-S-tranferase superfamily, chloride ION channel, metal transport; 1.40A {Homo sapiens} SCOP: a.45.1.1 c.47.1.5 PDB: 1k0n_A* 1k0o_A 1rk4_A 3uvh_A 3o3t_A 3p90_A 3qr6_A 3p8w_A 3tgz_A 3ma4_A 3swl_A | Back alignment and structure |
|---|
| >4fqu_A Putative glutathione transferase; glutathionyl-hydroquinone reductases, oxidoredu; 3.00A {Sphingobium chlorophenolicum} | Back alignment and structure |
|---|
| >2ws2_A NU-class GST, glutathione S-transferase; parasite, nematode; 2.01A {Haemonchus contortus} | Back alignment and structure |
|---|
| >1vf1_A Glutathione S-transferase 3; detoxification; HET: GSH; 1.77A {Gallus gallus} PDB: 1vf2_A* 1vf3_A* 1vf4_A | Back alignment and structure |
|---|
| >3fy7_A Chloride intracellular channel protein 3; GST, glutathione, CLIC, chloride channel, ION transport, ionic channel, nucleus, transport, gated channel; 1.95A {Homo sapiens} PDB: 3kjy_A | Back alignment and structure |
|---|
| >1b48_A GST, mgsta4-4, protein (glutathione S-transferase); subunit cooperativity; HET: HAG GSH; 2.60A {Mus musculus} SCOP: a.45.1.1 c.47.1.5 PDB: 1guk_A | Back alignment and structure |
|---|
| >3c8e_A YGHU, glutathione S-transferase homologue; glutathione transferase homologue, E. coli; HET: GSH; 1.50A {Escherichia coli} | Back alignment and structure |
|---|
| >3q18_A GSTO-2, glutathione S-transferase omega-2; glutathione transferase, dehydroascorbate reductase, reductase; 1.70A {Homo sapiens} PDB: 3q19_A* 3qag_A* | Back alignment and structure |
|---|
| >4g0i_A Protein YQJG; glutathionyl-hydroquinone reductase, oxidoreductase; HET: MES; 2.05A {Escherichia coli} PDB: 3r3e_A* 4g0k_A* 4g0l_A* | Back alignment and structure |
|---|
| >3vln_A GSTO-1, glutathione S-transferase omega-1; GST fold, reductase; HET: ASC; 1.70A {Homo sapiens} PDB: 1eem_A* 3lfl_A* | Back alignment and structure |
|---|
| >3rbt_A Glutathione transferase O1; glutathione S-transferase omega3; 2.20A {Bombyx mori} | Back alignment and structure |
|---|
| >1m0u_A GST2 gene product; flight muscle protein, sigma, transferase; HET: GSH; 1.75A {Drosophila melanogaster} SCOP: a.45.1.1 c.47.1.5 | Back alignment and structure |
|---|
| >4ecj_A Glutathione S-transferase; transferase-like protein, transcription regulation; HET: GSH; 1.76A {Pseudomonas aeruginosa} PDB: 4eci_A* | Back alignment and structure |
|---|
| >4dej_A Glutathione S-transferase related protein; transferase-like protein, transcription regulation; 2.90A {Idiomarina loihiensis} | Back alignment and structure |
|---|
| >2wb9_A Glutathione transferase sigma class; thioredoxin fold; HET: GSH; 1.59A {Fasciola hepatica} PDB: 2wdu_A* | Back alignment and structure |
|---|
| >3h1n_A Probable glutathione S-transferase; APC84167, bordetella bronchisepti structural genomics, PSI-2, protein structure initiative; 1.83A {Bordetella bronchiseptica RB50} | Back alignment and structure |
|---|
| >1bg5_A MAB, fusion protein of alpha-Na,K-ATPase with glutathione S-transferase; ankyrin binding, carrier crystallization, ION transport; 2.60A {Rattus norvegicus} SCOP: a.45.1.1 c.47.1.5 | Back alignment and structure |
|---|
| >1ljr_A HGST T2-2, glutathione S-transferase; HET: GSH; 3.20A {Homo sapiens} SCOP: a.45.1.1 c.47.1.5 PDB: 2ljr_A 3ljr_A* | Back alignment and structure |
|---|
| >2c3n_A Glutathione S-transferase theta 1; glutathione transferase, polymorphism; 1.5A {Homo sapiens} PDB: 2c3q_A* 2c3t_A | Back alignment and structure |
|---|
| >3m1g_A Putative glutathione S-transferase; ECM4-like subfamily, GST_C family, structural genomics, PSI- protein structure initiative; 2.10A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
| >2r4v_A XAP121, chloride intracellular channel protein 2; chloride intracellular channels, CLIC2, pore-forming protein ryanodine receptor, chloride channel; HET: GSH; 1.85A {Homo sapiens} PDB: 2r5g_A 2per_A* | Back alignment and structure |
|---|
| >1z9h_A Membrane-associated prostaglandin E synthase-2; membran associated protein, indomethacin, isomerase; HET: IMN; 2.60A {Macaca fascicularis} SCOP: a.45.1.1 c.47.1.5 PDB: 2pbj_A* | Back alignment and structure |
|---|
| >2ahe_A Chloride intracellular channel protein 4; glutathione-S-transferase superfamily, CLIC4, NCC27, chloride ION channel, metal transport; 1.80A {Homo sapiens} PDB: 2d2z_A | Back alignment and structure |
|---|
| >3bby_A Uncharacterized GST-like protein YFCF; NP_416804.1, glutathione S-transferase, N-terminal domain, S genomics; 1.85A {Escherichia coli} | Back alignment and structure |
|---|
| >2yv7_A CG10997-PA, LD46306P, CLIC; dmclic, chloride ION channel, GST fold, metal transport; 1.70A {Drosophila melanogaster} | Back alignment and structure |
|---|
| >3ir4_A Glutaredoxin 2; glutathione, IDP00895, structural genomics, for structural genomics of infectious diseases, csgid, oxidoreductase; HET: MSE GSH; 1.20A {Salmonella enterica subsp} PDB: 1g7o_A | Back alignment and structure |
|---|
| >3ppu_A Glutathione-S-transferase; GST fold; HET: GSH; 2.30A {Phanerochaete chrysosporium} | Back alignment and structure |
|---|
| >2yv9_A Chloride intracellular channel EXC-4; chloride ION channel, CLIC, GST fold, metal transport; 1.60A {Caenorhabditis elegans} | Back alignment and structure |
|---|
| >1k0d_A URE2 protein; nitrate assimilation, structural genomics, gene regulation; HET: GSH; 2.20A {Saccharomyces cerevisiae} SCOP: a.45.1.1 c.47.1.5 PDB: 1jzr_A* 1k0b_A* 1k0c_A* 1k0a_A* 1g6w_A 1g6y_A 1hqo_A | Back alignment and structure |
|---|
| >4id0_A Glutathione S-transferase-like protein YIBF; GST, enzyme function initiative, structural genomics; HET: GSF; 1.10A {Pseudomonas fluorescens} PDB: 4ibp_A* | Back alignment and structure |
|---|
| >4ags_A Thiol-dependent reductase 1; transferase, leishmaniasis, DE-gluathionylation; HET: MSE GSH; 2.30A {Leishmania infantum} | Back alignment and structure |
|---|
| >4ags_A Thiol-dependent reductase 1; transferase, leishmaniasis, DE-gluathionylation; HET: MSE GSH; 2.30A {Leishmania infantum} | Back alignment and structure |
|---|
| >2fno_A AGR_PAT_752P; thioredoxin fold, GST C-terminal domain-like fold, structura genomics, joint center for structural genomics, JCSG; 2.00A {Agrobacterium tumefaciens} SCOP: a.45.1.1 c.47.1.5 | Back alignment and structure |
|---|
| >4akg_A Glutathione S-transferase class-MU 26 kDa isozyme heavy chain cytoplasmic; motor protein, AAA+ protein, ASCE protein, P-loop ntpase; HET: ATP ADP; 3.30A {Schistosoma japonicum} PDB: 4ai6_A* 4akh_A* 4aki_A* 3qmz_A | Back alignment and structure |
|---|
| >4f03_A Glutathione transferase; GST fold; 1.80A {Phanerochaete chrysosporium} PDB: 4g19_A* | Back alignment and structure |
|---|
| >2hsn_A Methionyl-tRNA synthetase, cytoplasmic; protein complex protein interaction GST-fold, ligase/RNA binding protein complex; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >3bpd_A Uncharacterized protein; heptamer, Mg+2 ION, PSI-2, NYSGXRC, structural genom protein structure initiative; 2.80A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.61.1 | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 226 | ||||
| d1f60b_ | 90 | d.58.12.1 (B:) Guanine nucleotide exchange factor | 1e-40 | |
| d1b64a_ | 91 | d.58.12.1 (A:) Guanine nucleotide exchange factor | 4e-39 | |
| d1gh8a_ | 89 | d.58.12.1 (A:) aEF-1beta {Archaeon Methanobacteriu | 9e-32 | |
| d2hrkb1 | 118 | a.45.1.2 (B:4-121) GU4 nucleic-binding protein 1, | 2e-05 |
| >d1f60b_ d.58.12.1 (B:) Guanine nucleotide exchange factor (GEF) domain from elongation factor-1 beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 90 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: eEF-1beta-like family: eEF-1beta-like domain: Guanine nucleotide exchange factor (GEF) domain from elongation factor-1 beta species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 132 bits (333), Expect = 1e-40
Identities = 44/90 (48%), Positives = 62/90 (68%), Gaps = 3/90 (3%)
Query: 137 KSSVLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQIMLTIVDDLV 196
KS V LDVKPWDDET+++++ V++++MEGL WGA + P+G+GIKKLQI + DD V
Sbjct: 4 KSIVTLDVKPWDDETNLEEMVANVKAIEMEGLTWGAHQFIPIGFGIKKLQINCVVEDDKV 63
Query: 197 SVDTLIEEHLLEEPINEYVQSCDIVAFNKI 226
S+D L + E ++VQS DI A K+
Sbjct: 64 SLDDLQQS---IEEDEDHVQSTDIAAMQKL 90
|
| >d1b64a_ d.58.12.1 (A:) Guanine nucleotide exchange factor (GEF) domain from elongation factor-1 beta {Human (Homo sapiens) [TaxId: 9606]} Length = 91 | Back information, alignment and structure |
|---|
| >d1gh8a_ d.58.12.1 (A:) aEF-1beta {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Length = 89 | Back information, alignment and structure |
|---|
| >d2hrkb1 a.45.1.2 (B:4-121) GU4 nucleic-binding protein 1, Arc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 118 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 226 | |||
| d1f60b_ | 90 | Guanine nucleotide exchange factor (GEF) domain fr | 100.0 | |
| d1b64a_ | 91 | Guanine nucleotide exchange factor (GEF) domain fr | 100.0 | |
| d1gh8a_ | 89 | aEF-1beta {Archaeon Methanobacterium thermoautotro | 100.0 | |
| d1r5aa1 | 129 | Class delta GST {Mosquito (Anopheles dirus b), iso | 99.18 | |
| d2hrkb1 | 118 | GU4 nucleic-binding protein 1, Arc1p {Baker's yeas | 99.18 | |
| d1v2aa1 | 125 | Class delta GST {Mosquito (Anopheles dirus b), iso | 99.13 | |
| d1jlwa1 | 127 | Class delta GST {Mosquito (Anopheles dirus b), iso | 99.11 | |
| d1jlva1 | 123 | Class delta GST {Mosquito (Anopheles dirus b), iso | 99.08 | |
| d2cvda1 | 124 | Class sigma GST {Human (Homo sapiens) [TaxId: 9606 | 99.0 | |
| d1k0da1 | 151 | Yeast prion protein ure2p, nitrogen regulation fra | 98.99 | |
| d1f2ea1 | 121 | Class beta GST {Sphingomonas paucimobilis [TaxId: | 98.98 | |
| d1axda1 | 129 | Class phi GST {Maize (Zea mays), type I [TaxId: 45 | 98.98 | |
| d1nhya1 | 144 | GST-like domain of elongation factor 1-gamma {Bake | 98.98 | |
| d1gnwa1 | 126 | Class phi GST {Mouse-ear cress (Arabidopsis thalia | 98.96 | |
| d1pmta1 | 121 | Class beta GST {Proteus mirabilis [TaxId: 584]} | 98.92 | |
| d1ljra1 | 165 | Class theta GST {Human (Homo sapiens) [TaxId: 9606 | 98.92 | |
| d1n2aa1 | 121 | Class beta GST {Escherichia coli [TaxId: 562]} | 98.9 | |
| d1aw9a1 | 135 | Class phi GST {Maize (Zea mays), type III [TaxId: | 98.87 | |
| d2gsqa1 | 127 | Class sigma GST {Squid (Ommastrephes sloani pacifi | 98.86 | |
| d3gtub1 | 140 | Class mu GST {Human (Homo sapiens) [TaxId: 9606]} | 98.82 | |
| d2c4ja1 | 133 | Class mu GST {Human (Homo sapiens) [TaxId: 9606]} | 98.82 | |
| d1gsua1 | 133 | Class mu GST {Chicken (Gallus gallus) [TaxId: 9031 | 98.81 | |
| d2gsta1 | 133 | Class mu GST {Rat (Rattus norvegicus) [TaxId: 1011 | 98.81 | |
| d1fw1a1 | 125 | Class zeta GST {Human (Homo sapiens) [TaxId: 9606] | 98.74 | |
| d1e6ba1 | 133 | Class zeta GST {Mouse-ear cress (Arabidopsis thali | 98.73 | |
| d1k3ya1 | 142 | Class alpha GST {Human (Homo sapiens), (a1-1) [Tax | 98.72 | |
| d2a2ra1 | 132 | Class pi GST {Human (Homo sapiens) [TaxId: 9606]} | 98.71 | |
| d1gwca1 | 138 | Class tau GST {Aegilops tauschii, also known as Tr | 98.68 | |
| d1duga1 | 140 | Class alpha GST {Schistosoma japonicum [TaxId: 618 | 98.68 | |
| d1tw9a1 | 129 | Class sigma GST {Heligmosomoides polygyrus [TaxId: | 98.67 | |
| d1b48a1 | 143 | Class alpha GST {Mouse (Mus musculus), (a1-4) [Tax | 98.66 | |
| d2fhea1 | 136 | Class alpha GST {Fasciola hepatica [TaxId: 6192]} | 98.63 | |
| d1gula1 | 140 | Class alpha GST {Human (Homo sapiens), (a1-1) [Tax | 98.62 | |
| d1m0ua1 | 127 | Class sigma GST {Fruit fly (Drosophila melanogaste | 98.62 | |
| d1eema1 | 139 | Class omega GST {Human (Homo sapiens) [TaxId: 9606 | 98.62 | |
| d1okta1 | 126 | Pf GST {Malarial parasite (Plasmodium falciparum) | 98.57 | |
| d1tu7a1 | 131 | Class pi GST {Onchocerca volvulus [TaxId: 6282]} | 98.41 | |
| d1k0ma1 | 149 | Chloride intracellular channel 1 (clic1) {Human (H | 98.37 | |
| d1oe8a1 | 123 | Class alpha GST {Blood fluke (Schistosoma haematob | 98.36 | |
| d1z9ha1 | 161 | Microsomal prostaglandin E synthase-2 {Crab-eating | 98.04 | |
| d1oyja1 | 145 | Class tau GST {Rice (Oryza sativa) [TaxId: 4530]} | 97.9 | |
| d1g7oa1 | 140 | Glutaredoxin 2 {Escherichia coli [TaxId: 562]} | 90.05 |
| >d1f60b_ d.58.12.1 (B:) Guanine nucleotide exchange factor (GEF) domain from elongation factor-1 beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: eEF-1beta-like family: eEF-1beta-like domain: Guanine nucleotide exchange factor (GEF) domain from elongation factor-1 beta species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=2.2e-39 Score=243.73 Aligned_cols=90 Identities=49% Similarity=0.809 Sum_probs=88.4
Q ss_pred ccccceeEEEeecCCCcccHHHHHHHHhhhccCCceEeeeeeeeeeeeeeeEEEEEEEeCCCCChhHHHhhhhcccccCC
Q 027235 134 ESGKSSVLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPINE 213 (226)
Q Consensus 134 ~~~Ks~v~l~vkP~d~etdl~~l~~~vr~i~~~gl~wg~~k~~pv~fGikkLqi~~vv~Dd~v~~d~l~e~~~~~~~~e~ 213 (226)
|+|||+|+|+|||||+||||++|+++||+++++|+.||+++++||||||||||++|+|+|++||||+|+|+ ++++|+
T Consensus 1 p~aKs~vvl~VkP~d~e~Dl~~l~~~ik~i~~~gl~~g~~~~~PiafGlkkL~i~~vveDd~~~~D~lee~---i~~~Ed 77 (90)
T d1f60b_ 1 PAAKSIVTLDVKPWDDETNLEEMVANVKAIEMEGLTWGAHQFIPIGFGIKKLQINCVVEDDKVSLDDLQQS---IEEDED 77 (90)
T ss_dssp CCCEEEEEEEEEESSTTSCHHHHHHHHHTCCCTTEEEEEEEEEEEETTEEEEEEEEEEETTTCCHHHHHHH---HHTCTT
T ss_pred CcceEEEEEEEeeCCCCCCHHHHHHHHHHhCcCccEEeEEEEEEEeeeeeeEEEEEEEEeCCcCHHHHHHH---HHhhcC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999 889999
Q ss_pred CcceeeeeeeccC
Q 027235 214 YVQSCDIVAFNKI 226 (226)
Q Consensus 214 ~VqS~di~~~~k~ 226 (226)
+||||||++||||
T Consensus 78 ~VqSvdI~~~~ki 90 (90)
T d1f60b_ 78 HVQSTDIAAMQKL 90 (90)
T ss_dssp TEEEEEEEEEEEC
T ss_pred ceeEEEEEEEecC
Confidence 9999999999997
|
| >d1b64a_ d.58.12.1 (A:) Guanine nucleotide exchange factor (GEF) domain from elongation factor-1 beta {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1gh8a_ d.58.12.1 (A:) aEF-1beta {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
| >d1r5aa1 a.45.1.1 (A:87-215) Class delta GST {Mosquito (Anopheles dirus b), isozyme 1-5 [TaxId: 123217]} | Back information, alignment and structure |
|---|
| >d2hrkb1 a.45.1.2 (B:4-121) GU4 nucleic-binding protein 1, Arc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1v2aa1 a.45.1.1 (A:84-208) Class delta GST {Mosquito (Anopheles dirus b), isozyme 1-6 [TaxId: 123217]} | Back information, alignment and structure |
|---|
| >d1jlwa1 a.45.1.1 (A:91-217) Class delta GST {Mosquito (Anopheles dirus b), isozyme 1-4 [TaxId: 123217]} | Back information, alignment and structure |
|---|
| >d1jlva1 a.45.1.1 (A:85-207) Class delta GST {Mosquito (Anopheles dirus b), isozyme 1-3 [TaxId: 123217]} | Back information, alignment and structure |
|---|
| >d2cvda1 a.45.1.1 (A:76-199) Class sigma GST {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1k0da1 a.45.1.1 (A:201-351) Yeast prion protein ure2p, nitrogen regulation fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1f2ea1 a.45.1.1 (A:81-201) Class beta GST {Sphingomonas paucimobilis [TaxId: 13689]} | Back information, alignment and structure |
|---|
| >d1axda1 a.45.1.1 (A:81-210) Class phi GST {Maize (Zea mays), type I [TaxId: 4577]} | Back information, alignment and structure |
|---|
| >d1nhya1 a.45.1.1 (A:76-219) GST-like domain of elongation factor 1-gamma {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1gnwa1 a.45.1.1 (A:86-211) Class phi GST {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d1pmta1 a.45.1.1 (A:81-201) Class beta GST {Proteus mirabilis [TaxId: 584]} | Back information, alignment and structure |
|---|
| >d1ljra1 a.45.1.1 (A:80-244) Class theta GST {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1n2aa1 a.45.1.1 (A:81-201) Class beta GST {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1aw9a1 a.45.1.1 (A:83-217) Class phi GST {Maize (Zea mays), type III [TaxId: 4577]} | Back information, alignment and structure |
|---|
| >d2gsqa1 a.45.1.1 (A:76-202) Class sigma GST {Squid (Ommastrephes sloani pacificus) [TaxId: 6634]} | Back information, alignment and structure |
|---|
| >d3gtub1 a.45.1.1 (B:85-224) Class mu GST {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2c4ja1 a.45.1.1 (A:86-218) Class mu GST {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1gsua1 a.45.1.1 (A:85-217) Class mu GST {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
| >d2gsta1 a.45.1.1 (A:85-217) Class mu GST {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1fw1a1 a.45.1.1 (A:88-212) Class zeta GST {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1e6ba1 a.45.1.1 (A:88-220) Class zeta GST {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d1k3ya1 a.45.1.1 (A:81-222) Class alpha GST {Human (Homo sapiens), (a1-1) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2a2ra1 a.45.1.1 (A:78-209) Class pi GST {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1gwca1 a.45.1.1 (A:87-224) Class tau GST {Aegilops tauschii, also known as Triticum tauschii [TaxId: 37682]} | Back information, alignment and structure |
|---|
| >d1duga1 a.45.1.1 (A:81-220) Class alpha GST {Schistosoma japonicum [TaxId: 6182]} | Back information, alignment and structure |
|---|
| >d1tw9a1 a.45.1.1 (A:78-206) Class sigma GST {Heligmosomoides polygyrus [TaxId: 6339]} | Back information, alignment and structure |
|---|
| >d1b48a1 a.45.1.1 (A:80-222) Class alpha GST {Mouse (Mus musculus), (a1-4) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d2fhea1 a.45.1.1 (A:81-216) Class alpha GST {Fasciola hepatica [TaxId: 6192]} | Back information, alignment and structure |
|---|
| >d1gula1 a.45.1.1 (A:81-220) Class alpha GST {Human (Homo sapiens), (a1-1) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1m0ua1 a.45.1.1 (A:123-249) Class sigma GST {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
| >d1eema1 a.45.1.1 (A:103-241) Class omega GST {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1okta1 a.45.1.1 (A:86-211) Pf GST {Malarial parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
| >d1tu7a1 a.45.1.1 (A:78-208) Class pi GST {Onchocerca volvulus [TaxId: 6282]} | Back information, alignment and structure |
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| >d1k0ma1 a.45.1.1 (A:92-240) Chloride intracellular channel 1 (clic1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1oe8a1 a.45.1.1 (A:85-207) Class alpha GST {Blood fluke (Schistosoma haematobium) [TaxId: 6185]} | Back information, alignment and structure |
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| >d1z9ha1 a.45.1.1 (A:213-373) Microsomal prostaglandin E synthase-2 {Crab-eating macaque (Macaca fascicularis) [TaxId: 9541]} | Back information, alignment and structure |
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| >d1oyja1 a.45.1.1 (A:86-230) Class tau GST {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
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| >d1g7oa1 a.45.1.1 (A:76-215) Glutaredoxin 2 {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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