Query 027245
Match_columns 226
No_of_seqs 218 out of 1228
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 11:24:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027245.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027245hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3mng_A Peroxiredoxin-5, mitoch 99.9 1.6E-24 5.4E-29 178.7 11.7 108 66-173 12-124 (173)
2 4g2e_A Peroxiredoxin; redox pr 99.9 1E-24 3.5E-29 175.4 8.7 105 68-173 3-107 (157)
3 4gqc_A Thiol peroxidase, perox 99.9 1.4E-25 4.8E-30 182.3 3.1 105 68-172 4-109 (164)
4 2wfc_A Peroxiredoxin 5, PRDX5; 99.9 1.2E-23 4E-28 171.8 13.0 105 69-173 3-112 (167)
5 3uma_A Hypothetical peroxiredo 99.9 5.5E-24 1.9E-28 177.0 10.5 107 67-173 24-137 (184)
6 3gkn_A Bacterioferritin comigr 99.9 1.8E-22 6.1E-27 160.8 12.2 109 64-173 2-112 (163)
7 1tp9_A Peroxiredoxin, PRX D (t 99.9 2.3E-22 8E-27 161.9 12.0 105 69-173 4-116 (162)
8 2pwj_A Mitochondrial peroxired 99.9 8.8E-23 3E-27 166.8 9.6 105 69-173 7-124 (171)
9 3ixr_A Bacterioferritin comigr 99.9 1.2E-22 3.9E-27 166.4 9.0 108 65-173 17-128 (179)
10 2a4v_A Peroxiredoxin DOT5; yea 99.9 4.1E-22 1.4E-26 158.9 11.0 108 66-174 4-112 (159)
11 3drn_A Peroxiredoxin, bacterio 99.9 1.8E-21 6.1E-26 155.7 13.5 104 69-173 2-106 (161)
12 4f82_A Thioredoxin reductase; 99.9 2.6E-21 9E-26 160.9 11.0 107 67-173 8-128 (176)
13 2xhf_A Peroxiredoxin 5; oxidor 99.8 2.4E-21 8.3E-26 160.3 9.9 106 68-173 13-122 (171)
14 1nm3_A Protein HI0572; hybrid, 99.8 3.5E-21 1.2E-25 164.1 10.8 105 69-173 3-113 (241)
15 3p7x_A Probable thiol peroxida 99.8 7.8E-21 2.7E-25 152.9 11.8 102 68-173 19-122 (166)
16 2c0d_A Thioredoxin peroxidase 99.8 8.5E-21 2.9E-25 161.7 11.2 107 66-172 22-139 (221)
17 1xvw_A Hypothetical protein RV 99.8 1.4E-20 4.9E-25 149.0 11.8 103 69-172 9-114 (160)
18 1prx_A HORF6; peroxiredoxin, h 99.8 8E-21 2.7E-25 162.1 10.8 103 69-172 5-117 (224)
19 1psq_A Probable thiol peroxida 99.8 1.7E-20 5.7E-25 150.5 11.6 102 69-173 16-119 (163)
20 3tue_A Tryparedoxin peroxidase 99.8 5.3E-21 1.8E-25 164.1 9.1 105 68-173 25-140 (219)
21 1xiy_A Peroxiredoxin, pfaop; a 99.8 7E-21 2.4E-25 158.7 9.6 103 70-172 2-123 (182)
22 1n8j_A AHPC, alkyl hydroperoxi 99.8 9.9E-21 3.4E-25 156.0 10.4 102 70-172 2-110 (186)
23 1q98_A Thiol peroxidase, TPX; 99.8 7.2E-21 2.4E-25 153.2 9.2 102 69-173 17-120 (165)
24 2yzh_A Probable thiol peroxida 99.8 1.6E-20 5.6E-25 151.5 11.0 101 69-173 21-123 (171)
25 3sbc_A Peroxiredoxin TSA1; alp 99.8 1.3E-20 4.3E-25 161.5 10.2 104 69-173 23-136 (216)
26 2v2g_A Peroxiredoxin 6; oxidor 99.8 2.4E-20 8.2E-25 160.6 10.9 103 69-172 3-113 (233)
27 3u5r_E Uncharacterized protein 99.8 3.3E-20 1.1E-24 156.4 11.5 109 68-177 31-147 (218)
28 1xcc_A 1-Cys peroxiredoxin; un 99.8 2E-20 6.7E-25 159.3 10.1 103 69-172 3-114 (220)
29 2i81_A 2-Cys peroxiredoxin; st 99.8 3.7E-20 1.3E-24 156.3 11.7 106 67-172 19-135 (213)
30 3ewl_A Uncharacterized conserv 99.8 1.1E-19 3.9E-24 140.6 13.3 106 70-177 2-113 (142)
31 3zrd_A Thiol peroxidase; oxido 99.8 1.7E-20 5.8E-25 157.0 9.2 103 68-173 51-155 (200)
32 2h01_A 2-Cys peroxiredoxin; th 99.8 4.6E-20 1.6E-24 151.6 10.1 103 70-172 1-114 (192)
33 2pn8_A Peroxiredoxin-4; thiore 99.8 5E-20 1.7E-24 155.3 10.1 105 67-172 17-131 (211)
34 2bmx_A Alkyl hydroperoxidase C 99.8 1E-19 3.6E-24 150.1 11.6 105 67-172 2-125 (195)
35 1we0_A Alkyl hydroperoxide red 99.8 1.3E-19 4.3E-24 148.2 11.8 102 70-172 2-111 (187)
36 1zof_A Alkyl hydroperoxide-red 99.8 1.2E-19 4E-24 149.9 10.8 103 70-172 2-116 (198)
37 3qpm_A Peroxiredoxin; oxidored 99.8 1.2E-19 4.1E-24 156.3 10.7 105 67-172 46-160 (240)
38 3tjj_A Peroxiredoxin-4; thiore 99.8 7.8E-20 2.7E-24 159.2 9.6 107 65-172 58-174 (254)
39 1qmv_A Human thioredoxin perox 99.8 1.9E-19 6.6E-24 148.7 11.3 104 68-172 4-117 (197)
40 1uul_A Tryparedoxin peroxidase 99.8 2.2E-19 7.5E-24 149.1 11.3 104 68-172 5-119 (202)
41 4fo5_A Thioredoxin-like protei 99.8 1.9E-19 6.6E-24 140.2 9.9 108 67-177 5-117 (143)
42 2lrn_A Thiol:disulfide interch 99.8 5.6E-19 1.9E-23 138.9 12.6 107 69-177 3-113 (152)
43 3gl3_A Putative thiol:disulfid 99.8 1.2E-18 4.1E-23 136.0 13.9 106 69-177 3-109 (152)
44 3eur_A Uncharacterized protein 99.8 6.7E-19 2.3E-23 137.0 12.3 108 68-177 4-117 (142)
45 2f9s_A Thiol-disulfide oxidore 99.8 8E-19 2.7E-23 137.4 12.7 106 70-177 1-107 (151)
46 2ywi_A Hypothetical conserved 99.8 6.3E-19 2.1E-23 143.9 12.3 107 68-175 17-132 (196)
47 3fw2_A Thiol-disulfide oxidore 99.8 6.6E-19 2.3E-23 138.2 11.9 108 68-177 4-120 (150)
48 3kcm_A Thioredoxin family prot 99.8 1.4E-18 4.8E-23 135.9 13.0 105 69-175 2-108 (154)
49 1zye_A Thioredoxin-dependent p 99.8 5.2E-19 1.8E-23 149.8 11.1 104 68-172 26-139 (220)
50 3a2v_A Probable peroxiredoxin; 99.8 4.7E-19 1.6E-23 154.3 10.4 103 69-172 5-115 (249)
51 3ztl_A Thioredoxin peroxidase; 99.8 6.4E-19 2.2E-23 149.2 11.0 103 68-172 39-152 (222)
52 3eyt_A Uncharacterized protein 99.8 6.5E-19 2.2E-23 138.6 10.2 105 71-177 2-121 (158)
53 3hdc_A Thioredoxin family prot 99.8 1.2E-18 4E-23 138.2 11.4 111 62-176 8-118 (158)
54 2cvb_A Probable thiol-disulfid 99.8 1.2E-18 4.1E-23 141.8 11.4 105 68-175 6-118 (188)
55 3keb_A Probable thiol peroxida 99.8 9.8E-19 3.3E-23 150.4 11.1 100 68-173 21-127 (224)
56 3kij_A Probable glutathione pe 99.8 7.2E-19 2.5E-23 143.1 9.6 97 62-160 5-110 (180)
57 3lwa_A Secreted thiol-disulfid 99.8 2.1E-18 7.2E-23 139.8 11.8 101 68-170 30-140 (183)
58 2l5o_A Putative thioredoxin; s 99.8 2.7E-18 9.1E-23 134.2 11.9 106 70-177 3-110 (153)
59 3hcz_A Possible thiol-disulfid 99.8 6.4E-19 2.2E-23 136.2 8.2 109 68-178 4-116 (148)
60 2jsy_A Probable thiol peroxida 99.8 5.2E-19 1.8E-23 141.4 7.8 102 68-173 17-121 (167)
61 3lor_A Thiol-disulfide isomera 99.8 8.8E-19 3E-23 137.9 8.8 105 71-177 5-124 (160)
62 2obi_A PHGPX, GPX-4, phospholi 99.8 2E-18 6.7E-23 140.6 11.1 103 65-169 17-133 (183)
63 1xvq_A Thiol peroxidase; thior 99.8 8.8E-19 3E-23 142.4 8.9 101 69-174 18-120 (175)
64 2lrt_A Uncharacterized protein 99.8 4.2E-18 1.4E-22 135.0 12.6 105 69-177 9-117 (152)
65 1xzo_A BSSCO, hypothetical pro 99.8 1.3E-18 4.5E-23 139.0 9.7 102 68-171 6-117 (174)
66 3fkf_A Thiol-disulfide oxidore 99.8 2.8E-18 9.4E-23 132.6 10.7 109 68-178 4-119 (148)
67 2gs3_A PHGPX, GPX-4, phospholi 99.8 2.9E-18 1E-22 140.3 11.0 101 67-169 21-135 (185)
68 4eo3_A Bacterioferritin comigr 99.8 2.3E-18 7.8E-23 154.7 11.3 95 73-172 2-96 (322)
69 3erw_A Sporulation thiol-disul 99.8 5.5E-18 1.9E-22 130.2 11.7 108 67-177 7-118 (145)
70 1jfu_A Thiol:disulfide interch 99.8 3.4E-18 1.2E-22 138.7 10.7 103 68-172 33-138 (186)
71 2p31_A CL683, glutathione pero 99.8 2.5E-18 8.4E-23 140.2 9.4 93 66-160 20-121 (181)
72 3or5_A Thiol:disulfide interch 99.7 1.2E-17 4.2E-22 131.7 12.8 99 68-169 7-106 (165)
73 2v1m_A Glutathione peroxidase; 99.7 4.3E-18 1.5E-22 135.1 10.0 94 69-164 5-109 (169)
74 3kh7_A Thiol:disulfide interch 99.7 1.6E-17 5.5E-22 135.0 13.0 105 65-175 26-134 (176)
75 2p5q_A Glutathione peroxidase 99.7 4.4E-18 1.5E-22 135.2 8.8 94 69-164 6-110 (170)
76 2k6v_A Putative cytochrome C o 99.7 7.3E-18 2.5E-22 134.1 9.3 101 69-172 10-121 (172)
77 2ggt_A SCO1 protein homolog, m 99.7 2.6E-17 8.9E-22 129.9 12.2 100 74-175 2-113 (164)
78 2f8a_A Glutathione peroxidase 99.7 7.8E-18 2.7E-22 141.7 9.6 90 71-162 22-126 (208)
79 2i3y_A Epididymal secretory gl 99.7 8.9E-18 3E-22 142.9 9.7 88 72-162 32-134 (215)
80 2vup_A Glutathione peroxidase- 99.7 5.2E-18 1.8E-22 139.3 7.6 98 65-164 18-126 (190)
81 2b5x_A YKUV protein, TRXY; thi 99.7 1.3E-17 4.5E-22 128.5 9.2 105 70-177 2-114 (148)
82 3ia1_A THIO-disulfide isomeras 99.7 1.4E-17 4.7E-22 130.5 9.4 103 68-176 4-112 (154)
83 3ha9_A Uncharacterized thiored 99.7 9.9E-18 3.4E-22 133.2 8.7 106 68-178 10-135 (165)
84 1lu4_A Soluble secreted antige 99.7 5.2E-17 1.8E-21 123.7 12.1 101 73-177 2-103 (136)
85 1zzo_A RV1677; thioredoxin fol 99.7 8.6E-17 2.9E-21 121.9 12.5 102 72-177 2-105 (136)
86 2r37_A Glutathione peroxidase 99.7 1.7E-17 5.7E-22 140.1 9.1 88 72-162 14-116 (207)
87 2lja_A Putative thiol-disulfid 99.7 4.8E-17 1.6E-21 126.9 10.9 107 69-177 3-112 (152)
88 2ls5_A Uncharacterized protein 99.5 7.2E-19 2.5E-23 139.0 0.0 102 69-172 7-111 (159)
89 4evm_A Thioredoxin family prot 99.7 1.4E-16 4.6E-21 120.3 12.2 102 74-178 1-109 (138)
90 3raz_A Thioredoxin-related pro 99.7 6.6E-17 2.2E-21 126.9 10.3 94 74-170 4-100 (151)
91 3dwv_A Glutathione peroxidase- 99.7 3.5E-18 1.2E-22 140.2 2.7 96 67-164 18-124 (187)
92 2rli_A SCO2 protein homolog, m 99.7 2.2E-16 7.7E-21 125.6 11.9 97 76-174 7-115 (171)
93 1i5g_A Tryparedoxin II; electr 99.7 6.5E-17 2.2E-21 125.7 8.2 106 71-178 3-113 (144)
94 2hyx_A Protein DIPZ; thioredox 99.7 1.2E-16 4.3E-21 145.3 11.0 109 66-176 48-167 (352)
95 3cmi_A Peroxiredoxin HYR1; thi 99.7 1.6E-17 5.3E-22 133.7 4.2 89 71-162 8-105 (171)
96 2b7k_A SCO1 protein; metalloch 99.7 1.7E-16 5.7E-21 131.8 10.3 102 69-172 13-127 (200)
97 3me7_A Putative uncharacterize 99.7 1.5E-16 5.1E-21 128.9 9.8 101 70-172 2-116 (170)
98 2b1k_A Thiol:disulfide interch 99.7 6.7E-16 2.3E-20 122.9 13.3 106 65-175 18-127 (168)
99 1kng_A Thiol:disulfide interch 99.6 4.5E-16 1.5E-20 121.6 9.6 106 65-175 4-119 (156)
100 1o8x_A Tryparedoxin, TRYX, TXN 99.6 3.5E-16 1.2E-20 122.0 8.6 106 70-178 3-113 (146)
101 2h30_A Thioredoxin, peptide me 99.6 3.7E-16 1.3E-20 123.3 6.8 105 69-177 14-125 (164)
102 1o73_A Tryparedoxin; electron 99.6 1.3E-15 4.5E-20 117.8 7.3 106 70-178 3-113 (144)
103 3s9f_A Tryparedoxin; thioredox 99.6 6.4E-16 2.2E-20 124.4 4.1 108 69-179 22-134 (165)
104 2lus_A Thioredoxion; CR-Trp16, 99.4 1.4E-16 4.6E-21 122.8 0.0 104 73-176 2-111 (143)
105 4hde_A SCO1/SENC family lipopr 99.6 9.9E-15 3.4E-19 118.6 10.2 93 69-163 6-108 (170)
106 4h86_A Peroxiredoxin type-2; o 99.1 1E-09 3.5E-14 92.6 11.4 105 69-173 26-153 (199)
107 2l57_A Uncharacterized protein 98.8 3.8E-09 1.3E-13 79.9 5.1 90 73-165 4-95 (126)
108 2fwh_A Thiol:disulfide interch 98.8 1.5E-09 5.2E-14 83.7 2.2 93 69-165 4-104 (134)
109 3hxs_A Thioredoxin, TRXP; elec 98.7 1.3E-08 4.4E-13 78.3 6.2 84 79-165 35-118 (141)
110 3ul3_B Thioredoxin, thioredoxi 98.6 9.2E-08 3.2E-12 72.8 7.2 85 71-160 20-104 (128)
111 2ju5_A Thioredoxin disulfide i 98.6 2E-08 6.9E-13 79.5 2.3 93 69-167 24-131 (154)
112 2dml_A Protein disulfide-isome 98.5 3E-07 1E-11 69.4 7.4 68 96-164 34-101 (130)
113 3fk8_A Disulphide isomerase; A 98.5 2.5E-07 8.4E-12 70.4 6.6 68 97-165 29-104 (133)
114 3p2a_A Thioredoxin 2, putative 98.5 1.9E-07 6.4E-12 72.7 6.0 88 70-160 30-117 (148)
115 2f51_A Thioredoxin; electron t 98.4 7.9E-08 2.7E-12 72.5 3.1 80 80-161 5-85 (118)
116 1z6n_A Hypothetical protein PA 98.4 1.6E-07 5.5E-12 76.4 4.6 68 96-165 53-123 (167)
117 2dj1_A Protein disulfide-isome 98.4 3.4E-07 1.2E-11 70.0 6.1 61 80-142 19-81 (140)
118 3f3q_A Thioredoxin-1; His TAG, 98.4 2.5E-07 8.7E-12 68.5 5.3 69 90-160 17-85 (109)
119 2l5l_A Thioredoxin; structural 98.4 5.2E-07 1.8E-11 69.4 7.2 69 96-165 37-105 (136)
120 1sen_A Thioredoxin-like protei 98.4 8.8E-09 3E-13 82.8 -3.5 118 75-196 27-151 (164)
121 3gix_A Thioredoxin-like protei 98.4 3.6E-07 1.2E-11 72.2 5.4 101 96-198 22-126 (149)
122 2dj3_A Protein disulfide-isome 98.4 1.6E-07 5.4E-12 71.2 3.1 82 79-164 8-93 (133)
123 3f9u_A Putative exported cytoc 98.4 1.8E-07 6E-12 74.6 3.5 68 96-165 46-143 (172)
124 1x5e_A Thioredoxin domain cont 98.3 8.1E-07 2.8E-11 66.9 6.5 44 100-143 25-68 (126)
125 4euy_A Uncharacterized protein 98.3 3.4E-07 1.2E-11 67.0 4.1 69 90-160 11-79 (105)
126 2pu9_C TRX-F, thioredoxin F-ty 98.3 1.3E-06 4.4E-11 64.2 7.0 64 97-164 24-89 (111)
127 3aps_A DNAJ homolog subfamily 98.3 6.1E-07 2.1E-11 66.9 5.1 70 95-165 19-88 (122)
128 1nsw_A Thioredoxin, TRX; therm 98.3 7E-07 2.4E-11 64.6 4.7 48 94-142 14-61 (105)
129 1x5d_A Protein disulfide-isome 98.3 2E-06 7E-11 64.7 7.4 68 96-163 24-94 (133)
130 2j23_A Thioredoxin; immune pro 98.3 5.6E-07 1.9E-11 67.8 4.0 67 94-160 30-96 (121)
131 1xfl_A Thioredoxin H1; AT3G510 98.3 2.5E-06 8.5E-11 64.8 7.6 44 97-142 38-81 (124)
132 1ep7_A Thioredoxin CH1, H-type 98.3 1.9E-06 6.7E-11 62.9 6.7 46 97-143 24-69 (112)
133 3qfa_C Thioredoxin; protein-pr 98.2 1.9E-06 6.6E-11 64.4 6.6 62 96-159 30-91 (116)
134 3die_A Thioredoxin, TRX; elect 98.2 9.7E-07 3.3E-11 63.7 4.7 64 96-160 18-81 (106)
135 2vlu_A Thioredoxin, thioredoxi 98.2 2E-07 7E-12 69.6 1.0 70 71-142 8-77 (122)
136 3d6i_A Monothiol glutaredoxin- 98.2 2.7E-06 9.3E-11 62.4 7.1 46 97-142 21-66 (112)
137 2djj_A PDI, protein disulfide- 98.2 7.4E-07 2.5E-11 66.2 4.0 81 80-164 9-93 (121)
138 1faa_A Thioredoxin F; electron 98.2 2.5E-06 8.7E-11 63.8 6.8 42 97-140 37-78 (124)
139 1dby_A Chloroplast thioredoxin 98.2 3.9E-06 1.3E-10 60.8 7.4 46 96-142 18-63 (107)
140 1t00_A Thioredoxin, TRX; redox 98.2 4.9E-06 1.7E-10 60.9 7.6 46 96-142 22-67 (112)
141 3idv_A Protein disulfide-isome 98.2 2E-06 6.7E-11 71.3 5.8 69 93-161 28-98 (241)
142 3cxg_A Putative thioredoxin; m 98.2 6.3E-07 2.2E-11 69.0 2.6 64 97-163 40-104 (133)
143 1w4v_A Thioredoxin, mitochondr 98.2 4.2E-06 1.5E-10 62.6 7.1 46 96-142 30-75 (119)
144 1syr_A Thioredoxin; SGPP, stru 98.2 4.1E-06 1.4E-10 61.7 6.9 48 93-142 22-69 (112)
145 3h79_A Thioredoxin-like protei 98.2 7E-06 2.4E-10 61.9 8.2 68 96-163 32-103 (127)
146 2yzu_A Thioredoxin; redox prot 98.2 1.2E-06 4E-11 63.3 3.7 47 95-142 16-62 (109)
147 2vim_A Thioredoxin, TRX; thior 98.2 5.8E-06 2E-10 59.3 7.4 63 96-160 18-80 (104)
148 3m9j_A Thioredoxin; oxidoreduc 98.2 4.7E-06 1.6E-10 60.0 6.9 64 96-161 19-82 (105)
149 2voc_A Thioredoxin; electron t 98.2 1.7E-06 5.7E-11 64.0 4.4 45 96-141 16-60 (112)
150 2oe3_A Thioredoxin-3; electron 98.1 1.1E-06 3.9E-11 65.7 3.4 46 95-142 28-73 (114)
151 2i4a_A Thioredoxin; acidophIle 98.1 4.1E-06 1.4E-10 60.4 6.3 45 96-141 19-63 (107)
152 1xwb_A Thioredoxin; dimerizati 98.1 5E-06 1.7E-10 59.8 6.7 47 96-143 19-65 (106)
153 1thx_A Thioredoxin, thioredoxi 98.1 4.4E-06 1.5E-10 61.0 6.4 46 96-142 24-69 (115)
154 2wz9_A Glutaredoxin-3; protein 98.1 5.3E-06 1.8E-10 65.1 7.1 65 97-164 32-96 (153)
155 3tco_A Thioredoxin (TRXA-1); d 98.1 7.2E-06 2.5E-10 59.1 7.3 63 96-159 20-82 (109)
156 1fb6_A Thioredoxin M; electron 98.1 3.8E-06 1.3E-10 60.4 5.7 46 96-142 17-62 (105)
157 3emx_A Thioredoxin; structural 98.1 2.1E-06 7.2E-11 66.0 4.6 52 99-153 33-90 (135)
158 2e0q_A Thioredoxin; electron t 98.1 6.2E-06 2.1E-10 58.7 6.6 45 96-142 15-59 (104)
159 1wou_A Thioredoxin -related pr 98.1 8.1E-06 2.8E-10 61.7 7.5 65 97-176 24-95 (123)
160 2trx_A Thioredoxin; electron t 98.1 5.1E-06 1.8E-10 60.2 6.0 46 95-141 18-63 (108)
161 2xc2_A Thioredoxinn; oxidoredu 98.1 4.5E-06 1.5E-10 61.9 5.7 44 96-142 32-75 (117)
162 1qgv_A Spliceosomal protein U5 98.1 1.5E-06 5E-11 68.1 3.1 65 97-165 23-90 (142)
163 2ppt_A Thioredoxin-2; thiredox 98.1 1.6E-06 5.6E-11 68.7 3.2 50 92-142 59-108 (155)
164 3d22_A TRXH4, thioredoxin H-ty 98.1 4.9E-06 1.7E-10 63.6 5.8 52 97-153 46-97 (139)
165 1gh2_A Thioredoxin-like protei 98.1 1.1E-05 3.9E-10 58.6 7.5 46 96-143 20-65 (107)
166 1ti3_A Thioredoxin H, PTTRXH1; 98.1 1.2E-05 4.1E-10 58.6 7.7 61 97-159 26-86 (113)
167 3gnj_A Thioredoxin domain prot 98.1 1.2E-05 4.1E-10 58.4 7.5 48 95-143 20-67 (111)
168 2kuc_A Putative disulphide-iso 98.1 6.2E-06 2.1E-10 62.0 5.9 67 97-165 27-99 (130)
169 2dj0_A Thioredoxin-related tra 98.0 3.9E-06 1.3E-10 64.3 4.7 53 98-153 27-79 (137)
170 3uvt_A Thioredoxin domain-cont 98.0 7.3E-06 2.5E-10 59.4 5.9 47 97-143 21-69 (111)
171 2vm1_A Thioredoxin, thioredoxi 98.0 1.3E-05 4.5E-10 58.8 7.1 44 97-142 28-71 (118)
172 3qou_A Protein YBBN; thioredox 98.0 2.4E-06 8.2E-11 73.2 3.5 46 97-143 26-71 (287)
173 1r26_A Thioredoxin; redox-acti 98.0 9.6E-06 3.3E-10 61.8 6.4 47 95-143 35-81 (125)
174 3q6o_A Sulfhydryl oxidase 1; p 98.0 1.5E-05 5.3E-10 67.0 8.2 66 96-162 29-99 (244)
175 2yj7_A LPBCA thioredoxin; oxid 97.3 7.8E-07 2.7E-11 63.7 0.0 46 95-141 17-62 (106)
176 2i1u_A Thioredoxin, TRX, MPT46 98.0 1.9E-05 6.5E-10 58.3 7.6 46 96-142 29-74 (121)
177 2o8v_B Thioredoxin 1; disulfid 98.0 3.6E-06 1.2E-10 64.3 3.4 46 95-141 38-83 (128)
178 3hz4_A Thioredoxin; NYSGXRC, P 98.0 1.8E-05 6.1E-10 61.0 7.3 48 95-143 22-69 (140)
179 1zma_A Bacterocin transport ac 98.0 1.5E-05 5E-10 59.3 6.5 55 96-153 28-85 (118)
180 1v98_A Thioredoxin; oxidoreduc 98.0 2.5E-05 8.4E-10 59.9 7.8 45 96-142 50-94 (140)
181 3zzx_A Thioredoxin; oxidoreduc 97.9 2.7E-05 9.2E-10 58.0 7.2 45 97-143 20-64 (105)
182 3gyk_A 27KDA outer membrane pr 97.9 1.5E-05 5.1E-10 63.4 5.9 49 85-137 12-60 (175)
183 2lst_A Thioredoxin; structural 97.1 1.7E-06 5.7E-11 65.4 0.0 77 85-165 9-92 (130)
184 2l6c_A Thioredoxin; oxidoreduc 97.9 1.2E-05 4.1E-10 59.4 4.7 44 96-141 18-61 (110)
185 3dxb_A Thioredoxin N-terminall 97.9 1.1E-05 3.8E-10 67.2 4.8 47 95-142 28-74 (222)
186 3apq_A DNAJ homolog subfamily 97.8 3.2E-05 1.1E-09 63.6 6.9 67 96-164 113-179 (210)
187 3ed3_A Protein disulfide-isome 97.8 3.2E-05 1.1E-09 67.8 7.1 70 96-167 34-106 (298)
188 1nho_A Probable thioredoxin; b 97.8 1.2E-05 4E-10 55.8 2.8 51 99-153 3-53 (85)
189 3t58_A Sulfhydryl oxidase 1; o 97.8 5.8E-05 2E-09 71.6 8.3 66 95-161 28-98 (519)
190 1a8l_A Protein disulfide oxido 97.7 5.8E-05 2E-09 62.0 6.8 46 96-141 133-181 (226)
191 3ira_A Conserved protein; meth 97.7 4.4E-05 1.5E-09 62.6 5.9 70 96-166 38-118 (173)
192 1wmj_A Thioredoxin H-type; str 97.7 8.5E-06 2.9E-10 61.0 1.0 43 97-141 36-78 (130)
193 3qcp_A QSOX from trypanosoma b 97.6 8.9E-05 3E-09 69.7 7.6 65 98-162 43-114 (470)
194 1mek_A Protein disulfide isome 97.6 2.6E-05 8.8E-10 57.0 2.3 47 95-141 22-70 (120)
195 1fo5_A Thioredoxin; disulfide 97.6 1.8E-05 6.1E-10 54.8 1.4 43 98-141 3-45 (85)
196 2dbc_A PDCL2, unnamed protein 97.6 0.0001 3.6E-09 56.6 5.9 42 98-141 31-72 (135)
197 2b5e_A Protein disulfide-isome 97.6 9.1E-05 3.1E-09 68.7 6.2 58 93-153 27-84 (504)
198 1ilo_A Conserved hypothetical 97.5 0.00017 5.9E-09 49.0 6.0 36 101-137 3-38 (77)
199 3ph9_A Anterior gradient prote 97.5 3.6E-05 1.2E-09 61.6 2.5 76 97-173 44-122 (151)
200 1eej_A Thiol:disulfide interch 97.5 0.00011 3.8E-09 61.2 5.3 86 88-179 79-187 (216)
201 3hd5_A Thiol:disulfide interch 97.5 0.00016 5.5E-09 58.5 6.1 43 96-139 24-66 (195)
202 2av4_A Thioredoxin-like protei 97.5 8.5E-05 2.9E-09 60.5 4.1 100 96-200 40-146 (160)
203 3idv_A Protein disulfide-isome 97.4 0.0002 6.7E-09 59.0 6.1 50 94-143 144-195 (241)
204 2hls_A Protein disulfide oxido 97.4 0.00032 1.1E-08 59.5 7.3 47 96-142 137-186 (243)
205 3kp8_A Vkorc1/thioredoxin doma 97.4 4.9E-05 1.7E-09 56.7 1.9 30 98-127 13-42 (106)
206 2es7_A Q8ZP25_salty, putative 97.4 6.6E-05 2.3E-09 59.0 2.6 70 90-165 27-103 (142)
207 2ywm_A Glutaredoxin-like prote 97.3 0.00033 1.1E-08 57.7 6.5 53 96-153 135-187 (229)
208 3f8u_A Protein disulfide-isome 97.3 0.00013 4.3E-09 67.1 3.7 67 97-164 370-437 (481)
209 3h93_A Thiol:disulfide interch 97.2 0.0004 1.4E-08 56.0 5.6 42 96-138 24-65 (192)
210 2r2j_A Thioredoxin domain-cont 97.2 0.00052 1.8E-08 61.6 6.9 57 95-154 20-81 (382)
211 1sji_A Calsequestrin 2, calseq 97.2 0.00016 5.5E-09 64.0 3.5 50 93-143 24-80 (350)
212 1oaz_A Thioredoxin 1; immune s 97.1 9.3E-05 3.2E-09 56.0 0.5 46 95-141 19-78 (123)
213 3iv4_A Putative oxidoreductase 97.1 0.00033 1.1E-08 53.8 3.5 59 93-154 20-79 (112)
214 3uem_A Protein disulfide-isome 97.1 0.00071 2.4E-08 59.7 6.2 47 96-142 266-313 (361)
215 3f8u_A Protein disulfide-isome 97.1 0.00049 1.7E-08 63.2 5.3 52 98-153 22-73 (481)
216 2znm_A Thiol:disulfide interch 97.1 0.0002 7E-09 57.7 2.4 42 96-138 21-62 (195)
217 1a0r_P Phosducin, MEKA, PP33; 97.1 0.00041 1.4E-08 59.7 4.4 42 97-140 133-174 (245)
218 3apo_A DNAJ homolog subfamily 97.0 0.0012 4E-08 64.5 7.6 65 96-161 454-518 (780)
219 3apo_A DNAJ homolog subfamily 97.0 0.0013 4.6E-08 64.0 7.8 63 96-159 674-736 (780)
220 2rem_A Disulfide oxidoreductas 96.9 0.0012 4E-08 53.0 5.8 41 97-138 25-65 (193)
221 1z6m_A Conserved hypothetical 96.9 0.0033 1.1E-07 49.7 7.8 50 87-138 19-69 (175)
222 3evi_A Phosducin-like protein 96.9 0.0013 4.5E-08 50.1 5.2 41 99-141 25-65 (118)
223 2e7p_A Glutaredoxin; thioredox 96.9 0.00096 3.3E-08 49.0 4.3 57 94-157 17-76 (116)
224 2qsi_A Putative hydrogenase ex 96.8 0.003 1E-07 49.9 7.0 47 97-144 33-81 (137)
225 2qgv_A Hydrogenase-1 operon pr 96.8 0.00085 2.9E-08 53.3 3.8 52 99-153 36-89 (140)
226 1h75_A Glutaredoxin-like prote 96.8 0.0035 1.2E-07 43.1 6.5 53 101-160 3-56 (81)
227 3ga4_A Dolichyl-diphosphooligo 96.8 0.0048 1.7E-07 50.7 8.4 47 98-144 38-95 (178)
228 2b5e_A Protein disulfide-isome 96.7 0.0017 5.8E-08 60.1 5.8 45 96-140 375-421 (504)
229 2trc_P Phosducin, MEKA, PP33; 96.7 0.0012 4E-08 55.5 3.7 40 98-139 121-160 (217)
230 1r7h_A NRDH-redoxin; thioredox 96.6 0.0056 1.9E-07 41.1 6.5 53 101-160 3-56 (75)
231 1ego_A Glutaredoxin; electron 96.6 0.0016 5.5E-08 45.1 3.7 56 101-158 3-62 (85)
232 2k8s_A Thioredoxin; dimer, str 96.5 0.0027 9.4E-08 44.0 4.5 55 101-158 4-59 (80)
233 1a8l_A Protein disulfide oxido 96.5 0.0061 2.1E-07 49.7 7.2 55 96-153 21-76 (226)
234 1t3b_A Thiol:disulfide interch 96.5 0.0025 8.7E-08 52.8 4.7 37 96-136 85-121 (211)
235 2fgx_A Putative thioredoxin; N 96.5 0.004 1.4E-07 47.0 5.3 53 99-158 30-83 (107)
236 1wjk_A C330018D20RIK protein; 96.5 0.0024 8.3E-08 46.8 4.0 55 98-158 16-70 (100)
237 2ywm_A Glutaredoxin-like prote 96.3 0.0084 2.9E-07 49.1 6.9 56 96-154 20-80 (229)
238 3us3_A Calsequestrin-1; calciu 96.3 0.0083 2.8E-07 53.6 7.0 50 95-144 28-83 (367)
239 1ttz_A Conserved hypothetical 95.9 0.009 3.1E-07 43.0 4.5 50 101-159 3-52 (87)
240 2dlx_A UBX domain-containing p 95.8 0.04 1.4E-06 43.8 8.2 90 97-195 42-138 (153)
241 2klx_A Glutaredoxin; thioredox 95.5 0.046 1.6E-06 38.2 6.9 52 101-160 8-61 (89)
242 1kte_A Thioltransferase; redox 95.2 0.017 5.8E-07 41.6 3.9 54 101-158 14-72 (105)
243 3dml_A Putative uncharacterize 95.2 0.01 3.5E-07 45.4 2.7 43 98-140 19-62 (116)
244 1hyu_A AHPF, alkyl hydroperoxi 95.1 0.032 1.1E-06 52.1 6.5 44 97-142 117-160 (521)
245 1fov_A Glutaredoxin 3, GRX3; a 95.1 0.059 2E-06 36.6 6.4 53 101-160 3-57 (82)
246 3hz8_A Thiol:disulfide interch 95.1 0.024 8.2E-07 46.0 4.8 42 96-138 23-64 (193)
247 3l78_A Regulatory protein SPX; 95.0 0.038 1.3E-06 42.0 5.6 66 101-173 2-71 (120)
248 3c1r_A Glutaredoxin-1; oxidize 95.0 0.041 1.4E-06 41.3 5.6 50 101-157 27-85 (118)
249 1v58_A Thiol:disulfide interch 94.9 0.045 1.5E-06 46.1 6.3 47 86-137 88-134 (241)
250 2hze_A Glutaredoxin-1; thiored 94.9 0.041 1.4E-06 40.7 5.3 51 101-158 21-79 (114)
251 1wik_A Thioredoxin-like protei 94.8 0.093 3.2E-06 38.5 7.1 58 93-158 11-74 (109)
252 2khp_A Glutaredoxin; thioredox 94.8 0.1 3.5E-06 36.5 6.9 53 101-160 8-62 (92)
253 2yan_A Glutaredoxin-3; oxidore 94.7 0.073 2.5E-06 38.7 6.3 56 95-158 15-76 (105)
254 3msz_A Glutaredoxin 1; alpha-b 94.6 0.1 3.5E-06 35.8 6.6 53 101-160 6-67 (89)
255 1aba_A Glutaredoxin; electron 94.6 0.13 4.3E-06 36.0 7.1 52 101-159 2-69 (87)
256 3rhb_A ATGRXC5, glutaredoxin-C 94.3 0.084 2.9E-06 38.7 5.9 50 101-157 21-76 (113)
257 3uem_A Protein disulfide-isome 94.3 0.1 3.5E-06 45.6 7.3 55 97-153 135-189 (361)
258 3fz4_A Putative arsenate reduc 94.1 0.082 2.8E-06 40.2 5.6 67 100-173 4-74 (120)
259 3gkx_A Putative ARSC family re 94.1 0.053 1.8E-06 41.3 4.4 65 101-172 6-74 (120)
260 3l9v_A Putative thiol-disulfid 94.1 0.036 1.2E-06 44.7 3.6 42 96-139 14-58 (189)
261 2c0g_A ERP29 homolog, windbeut 94.0 0.043 1.5E-06 47.1 4.1 58 95-156 31-97 (248)
262 3rdw_A Putative arsenate reduc 94.0 0.086 2.9E-06 40.2 5.4 66 101-173 7-77 (121)
263 3ic4_A Glutaredoxin (GRX-1); s 94.0 0.13 4.3E-06 36.0 6.0 54 101-161 14-74 (92)
264 2qc7_A ERP31, ERP28, endoplasm 94.0 0.03 1E-06 47.8 3.0 57 94-154 19-80 (240)
265 1z3e_A Regulatory protein SPX; 93.9 0.11 3.8E-06 39.8 6.0 65 101-172 3-71 (132)
266 3f0i_A Arsenate reductase; str 93.9 0.085 2.9E-06 40.1 5.2 66 101-173 6-76 (119)
267 3ctg_A Glutaredoxin-2; reduced 93.8 0.1 3.5E-06 39.9 5.7 51 101-158 39-98 (129)
268 2djk_A PDI, protein disulfide- 93.8 0.048 1.6E-06 41.2 3.7 53 96-153 22-74 (133)
269 2cq9_A GLRX2 protein, glutared 93.7 0.15 5E-06 38.8 6.4 49 104-159 32-85 (130)
270 1un2_A DSBA, thiol-disulfide i 93.7 0.019 6.4E-07 47.3 1.3 41 98-139 114-157 (197)
271 1s3c_A Arsenate reductase; ARS 93.7 0.08 2.7E-06 41.5 4.8 66 101-173 4-73 (141)
272 3qmx_A Glutaredoxin A, glutare 93.6 0.18 6E-06 36.7 6.3 52 100-158 17-71 (99)
273 2wci_A Glutaredoxin-4; redox-a 93.5 0.15 5.2E-06 39.6 6.1 56 99-161 36-98 (135)
274 2lqo_A Putative glutaredoxin R 92.9 0.18 6.2E-06 36.5 5.4 52 101-159 6-60 (92)
275 2ht9_A Glutaredoxin-2; thiored 92.8 0.22 7.4E-06 39.0 6.1 49 104-159 54-107 (146)
276 3nzn_A Glutaredoxin; structura 92.6 0.35 1.2E-05 34.9 6.6 21 101-121 24-44 (103)
277 3h8q_A Thioredoxin reductase 3 92.5 0.33 1.1E-05 35.8 6.6 50 104-160 22-77 (114)
278 2wem_A Glutaredoxin-related pr 92.5 0.28 9.6E-06 37.1 6.2 56 99-161 21-84 (118)
279 3kp9_A Vkorc1/thioredoxin doma 91.9 0.033 1.1E-06 49.1 0.3 26 101-126 201-226 (291)
280 1t1v_A SH3BGRL3, SH3 domain-bi 91.5 0.49 1.7E-05 33.4 6.2 58 102-160 5-67 (93)
281 3ipz_A Monothiol glutaredoxin- 91.4 0.36 1.2E-05 35.5 5.5 60 94-161 15-81 (109)
282 3feu_A Putative lipoprotein; a 91.0 0.11 3.8E-06 41.7 2.6 36 99-137 24-59 (185)
283 2kok_A Arsenate reductase; bru 90.5 0.21 7.3E-06 37.6 3.6 64 101-173 7-74 (120)
284 2ct6_A SH3 domain-binding glut 90.4 0.87 3E-05 33.5 6.9 49 101-150 10-59 (111)
285 3zyw_A Glutaredoxin-3; metal b 90.4 0.38 1.3E-05 35.7 4.9 61 93-161 12-79 (111)
286 1rw1_A Conserved hypothetical 90.2 0.22 7.4E-06 37.2 3.4 64 101-173 2-69 (114)
287 3gx8_A Monothiol glutaredoxin- 90.0 0.93 3.2E-05 34.1 6.9 56 99-161 17-82 (121)
288 1pn0_A Phenol 2-monooxygenase; 89.7 0.93 3.2E-05 43.6 8.2 128 68-195 478-644 (665)
289 3gv1_A Disulfide interchange p 89.5 0.4 1.4E-05 37.5 4.5 27 96-122 13-39 (147)
290 2dkh_A 3-hydroxybenzoate hydro 88.2 0.61 2.1E-05 44.5 5.7 113 69-182 467-614 (639)
291 4dvc_A Thiol:disulfide interch 88.1 0.86 3E-05 35.2 5.6 39 96-136 21-59 (184)
292 3gn3_A Putative protein-disulf 87.2 0.45 1.5E-05 38.3 3.6 41 96-136 13-53 (182)
293 3c7m_A Thiol:disulfide interch 86.2 1.2 4.1E-05 34.8 5.6 39 98-138 19-58 (195)
294 3l9s_A Thiol:disulfide interch 85.1 0.41 1.4E-05 38.7 2.3 39 98-137 22-63 (191)
295 3bci_A Disulfide bond protein 84.8 1.4 4.7E-05 34.6 5.3 42 96-137 10-53 (186)
296 2hls_A Protein disulfide oxido 84.5 1.8 6.1E-05 36.1 6.1 54 96-153 25-84 (243)
297 2ec4_A FAS-associated factor 1 84.0 2.4 8.4E-05 34.1 6.5 99 95-196 53-171 (178)
298 2wul_A Glutaredoxin related pr 83.7 3.7 0.00013 31.0 7.1 62 93-162 16-85 (118)
299 3tdg_A DSBG, putative uncharac 83.7 1.3 4.3E-05 38.6 4.9 40 97-139 147-186 (273)
300 1nm3_A Protein HI0572; hybrid, 80.9 1.7 5.9E-05 35.6 4.6 53 101-160 172-225 (241)
301 3l4n_A Monothiol glutaredoxin- 80.5 2.2 7.4E-05 32.5 4.7 62 94-161 11-78 (127)
302 3gha_A Disulfide bond formatio 79.7 2.5 8.5E-05 34.2 5.1 43 96-138 28-72 (202)
303 3gmf_A Protein-disulfide isome 79.2 2.6 9E-05 34.4 5.1 49 87-137 7-57 (205)
304 3f4s_A Alpha-DSBA1, putative u 78.2 2.6 8.8E-05 35.0 4.8 42 96-137 38-81 (226)
305 2in3_A Hypothetical protein; D 75.5 9.8 0.00034 30.1 7.5 39 98-137 7-45 (216)
306 4f9z_D Endoplasmic reticulum r 69.3 12 0.00041 30.3 6.7 43 97-140 131-173 (227)
307 1u6t_A SH3 domain-binding glut 69.1 13 0.00046 28.1 6.5 51 100-151 1-52 (121)
308 2axo_A Hypothetical protein AT 68.5 19 0.00064 31.1 8.0 38 98-138 43-80 (270)
309 3ihg_A RDME; flavoenzyme, anth 64.4 19 0.00063 32.9 7.7 88 67-181 418-506 (535)
310 1w41_A 50S ribosomal protein L 60.3 21 0.00071 25.6 5.9 52 123-174 25-80 (101)
311 3j21_Z 50S ribosomal protein L 59.0 15 0.00052 26.3 4.9 52 123-174 24-79 (99)
312 3kzq_A Putative uncharacterize 58.4 12 0.0004 29.8 4.6 37 100-137 4-40 (208)
313 1s2w_A Phosphoenolpyruvate pho 57.9 29 0.00098 30.2 7.3 59 116-174 169-235 (295)
314 3ghf_A Septum site-determining 57.7 11 0.00039 28.3 4.1 39 117-155 61-99 (120)
315 4gxt_A A conserved functionall 54.6 9.4 0.00032 34.3 3.7 40 116-155 223-262 (385)
316 2x8g_A Thioredoxin glutathione 54.2 16 0.00053 34.1 5.3 17 104-120 23-39 (598)
317 4as2_A Phosphorylcholine phosp 53.8 11 0.00037 33.2 3.9 35 117-151 146-180 (327)
318 2xry_A Deoxyribodipyrimidine p 49.5 70 0.0024 29.2 8.9 75 97-172 67-155 (482)
319 3ih1_A Methylisocitrate lyase; 48.0 64 0.0022 28.2 7.9 60 116-175 174-241 (305)
320 3v7q_A Probable ribosomal prot 47.6 74 0.0025 22.7 7.8 50 123-173 28-81 (101)
321 3fvv_A Uncharacterized protein 47.2 36 0.0012 26.5 5.8 38 117-154 95-132 (232)
322 3umv_A Deoxyribodipyrimidine p 47.1 71 0.0024 29.7 8.5 63 97-161 68-137 (506)
323 3u5e_c L32, RP73, YL38, 60S ri 46.8 33 0.0011 24.9 5.0 53 123-175 31-87 (105)
324 1k1e_A Deoxy-D-mannose-octulos 46.5 33 0.0011 26.3 5.3 35 121-155 42-76 (180)
325 3cpq_A 50S ribosomal protein L 45.6 42 0.0014 24.5 5.5 52 123-174 30-85 (110)
326 4a18_G RPL30; ribosome, eukary 45.6 41 0.0014 24.3 5.4 52 123-174 31-86 (104)
327 1l6r_A Hypothetical protein TA 45.5 43 0.0015 26.9 6.1 41 119-159 27-67 (227)
328 3v7e_A Ribosome-associated pro 44.9 49 0.0017 22.8 5.5 53 122-175 19-75 (82)
329 3eoo_A Methylisocitrate lyase; 44.2 75 0.0026 27.6 7.8 74 100-175 156-237 (298)
330 1zlp_A PSR132, petal death pro 44.0 72 0.0025 28.0 7.7 57 116-174 188-254 (318)
331 4e6z_A Apicoplast TIC22, putat 43.9 17 0.00058 31.5 3.5 67 67-142 69-139 (279)
332 3ibs_A Conserved hypothetical 43.3 67 0.0023 25.0 6.8 22 119-140 128-149 (218)
333 2hjp_A Phosphonopyruvate hydro 43.3 47 0.0016 28.7 6.3 58 116-173 165-231 (290)
334 2ze3_A DFA0005; organic waste 43.0 88 0.003 26.7 7.9 60 115-174 166-229 (275)
335 2jad_A Yellow fluorescent prot 42.7 6.6 0.00023 35.4 0.7 20 96-117 260-279 (362)
336 2wq7_A RE11660P; lyase-DNA com 42.0 55 0.0019 30.6 7.0 45 115-160 87-131 (543)
337 1dnp_A DNA photolyase; DNA rep 41.8 59 0.002 29.8 7.1 64 97-161 28-103 (471)
338 1xbi_A 50S ribosomal protein L 40.9 80 0.0027 23.4 6.5 52 122-174 37-93 (120)
339 2gjf_A Designed protein; proca 40.6 32 0.0011 23.2 3.9 28 133-160 50-77 (78)
340 2fpr_A Histidine biosynthesis 40.2 33 0.0011 26.3 4.5 41 117-157 45-100 (176)
341 3kzx_A HAD-superfamily hydrola 39.7 74 0.0025 24.4 6.5 53 122-174 111-177 (231)
342 1sji_A Calsequestrin 2, calseq 39.3 78 0.0027 27.0 7.2 64 98-161 246-315 (350)
343 2obb_A Hypothetical protein; s 39.3 30 0.001 26.6 4.0 42 119-160 29-73 (142)
344 2l69_A Rossmann 2X3 fold prote 39.1 1.1E+02 0.0039 22.4 7.0 74 118-191 37-120 (134)
345 4ev1_A Anabena TIC22; TIC22 fo 38.9 44 0.0015 28.5 5.3 85 70-161 9-110 (252)
346 3pe6_A Monoglyceride lipase; a 38.5 62 0.0021 25.1 5.9 58 76-138 17-77 (303)
347 2p9j_A Hypothetical protein AQ 38.5 49 0.0017 24.4 5.1 55 120-174 42-101 (162)
348 3lye_A Oxaloacetate acetyl hyd 38.5 1.1E+02 0.0039 26.6 8.0 74 99-174 162-244 (307)
349 2fc3_A 50S ribosomal protein L 38.3 1.2E+02 0.004 22.5 7.1 50 124-174 38-92 (124)
350 3on1_A BH2414 protein; structu 37.8 1.1E+02 0.0037 21.7 8.1 49 123-172 27-79 (101)
351 2j07_A Deoxyribodipyrimidine p 37.5 60 0.002 29.2 6.3 56 115-171 50-114 (420)
352 3hju_A Monoglyceride lipase; a 37.0 79 0.0027 25.6 6.5 60 74-138 33-95 (342)
353 3iz5_f 60S ribosomal protein L 36.8 55 0.0019 24.1 5.0 52 123-174 35-90 (112)
354 2r47_A Uncharacterized protein 35.6 22 0.00076 28.3 2.7 83 75-162 65-147 (157)
355 1vq8_F 50S ribosomal protein L 35.4 1.2E+02 0.004 22.3 6.7 51 123-174 38-93 (120)
356 3dxs_X Copper-transporting ATP 35.3 64 0.0022 20.4 4.7 61 100-160 4-72 (74)
357 1xg4_A Probable methylisocitra 34.0 1.1E+02 0.0036 26.5 7.0 59 116-174 166-232 (295)
358 2pib_A Phosphorylated carbohyd 34.0 63 0.0021 24.0 5.1 77 121-198 91-181 (216)
359 1np7_A DNA photolyase; protein 32.3 65 0.0022 29.5 5.7 45 115-160 63-107 (489)
360 1owl_A Photolyase, deoxyribodi 32.2 72 0.0025 29.2 6.0 46 115-161 55-100 (484)
361 2aif_A Ribosomal protein L7A; 32.2 1.2E+02 0.0041 22.9 6.4 51 124-175 51-106 (135)
362 2xzm_U Ribosomal protein L7AE 31.9 1.3E+02 0.0045 22.5 6.5 48 123-171 33-85 (126)
363 3hug_B Probable conserved memb 31.7 25 0.00084 26.3 2.2 23 107-129 52-74 (108)
364 2imf_A HCCA isomerase, 2-hydro 31.6 63 0.0022 25.3 4.9 33 101-136 3-35 (203)
365 3mc1_A Predicted phosphatase, 31.6 97 0.0033 23.5 5.9 56 119-174 91-160 (226)
366 2pr7_A Haloacid dehalogenase/e 31.4 36 0.0012 23.9 3.1 39 115-153 19-57 (137)
367 3mmz_A Putative HAD family hyd 31.2 68 0.0023 24.5 4.9 83 77-174 13-103 (176)
368 3sd7_A Putative phosphatase; s 30.8 1.3E+02 0.0043 23.2 6.6 56 122-177 118-188 (240)
369 2qiw_A PEP phosphonomutase; st 30.2 1.5E+02 0.0053 24.8 7.3 59 116-174 167-233 (255)
370 3e58_A Putative beta-phosphogl 30.0 69 0.0024 23.8 4.7 80 119-199 94-187 (214)
371 2nyv_A Pgpase, PGP, phosphogly 29.9 1.9E+02 0.0064 22.2 8.4 36 119-154 88-123 (222)
372 1rlg_A 50S ribosomal protein L 29.7 1.6E+02 0.0056 21.4 7.7 50 124-174 37-91 (119)
373 1nnl_A L-3-phosphoserine phosp 29.6 42 0.0014 26.0 3.4 35 120-154 92-126 (225)
374 1vjq_A Designed protein; struc 29.4 49 0.0017 22.2 3.4 29 133-161 42-70 (79)
375 2gmw_A D,D-heptose 1,7-bisphos 29.3 74 0.0025 24.9 4.9 40 117-156 53-107 (211)
376 2ale_A SNU13, NHP2/L7AE family 29.3 96 0.0033 23.6 5.4 51 123-174 41-96 (134)
377 3fa4_A 2,3-dimethylmalate lyas 28.9 1.9E+02 0.0065 25.1 7.8 75 98-174 153-236 (302)
378 2wm8_A MDP-1, magnesium-depend 28.6 55 0.0019 25.0 4.0 58 117-174 71-138 (187)
379 2jya_A AGR_C_3324P, uncharacte 28.2 44 0.0015 24.9 3.0 29 134-162 54-82 (106)
380 2j4d_A Cryptochrome 3, cryptoc 28.1 79 0.0027 29.3 5.5 45 115-160 98-142 (525)
381 2e0i_A 432AA long hypothetical 27.7 1.3E+02 0.0043 27.3 6.8 64 96-162 26-98 (440)
382 1wr8_A Phosphoglycolate phosph 27.6 1.1E+02 0.0036 24.2 5.7 42 118-159 24-65 (231)
383 2jfz_A Glutamate racemase; cel 27.5 72 0.0025 26.4 4.7 59 99-159 27-91 (255)
384 3fry_A Probable copper-exporti 27.1 65 0.0022 20.5 3.6 55 99-159 6-69 (73)
385 4fb5_A Probable oxidoreductase 26.8 56 0.0019 27.9 4.0 44 111-154 36-80 (393)
386 3m9l_A Hydrolase, haloacid deh 25.5 87 0.003 23.7 4.6 56 121-176 77-147 (205)
387 3vi6_A 60S ribosomal protein L 25.4 1.2E+02 0.004 22.7 5.2 53 123-175 36-92 (125)
388 1nrw_A Hypothetical protein, h 25.2 1.6E+02 0.0055 23.9 6.5 40 120-159 27-66 (288)
389 2i3d_A AGR_C_3351P, hypothetic 25.0 41 0.0014 26.4 2.6 69 69-138 15-87 (249)
390 2gzm_A Glutamate racemase; enz 25.0 1.2E+02 0.0042 25.2 5.7 66 99-164 30-101 (267)
391 4gqa_A NAD binding oxidoreduct 24.9 91 0.0031 27.3 5.1 43 112-154 38-82 (412)
392 3ib6_A Uncharacterized protein 24.6 79 0.0027 24.1 4.2 38 117-154 37-77 (189)
393 2eq5_A 228AA long hypothetical 24.6 66 0.0022 25.8 3.8 52 117-170 62-115 (228)
394 3s6j_A Hydrolase, haloacid deh 24.5 73 0.0025 24.2 4.0 34 121-154 98-131 (233)
395 3trd_A Alpha/beta hydrolase; c 24.4 90 0.0031 23.3 4.5 58 76-138 7-71 (208)
396 3ga8_A HTH-type transcriptiona 24.2 43 0.0015 22.8 2.2 33 95-127 25-63 (78)
397 3hp4_A GDSL-esterase; psychrot 24.2 1.5E+02 0.0051 21.9 5.7 43 113-155 86-140 (185)
398 2q1z_B Anti-sigma factor CHRR, 24.0 46 0.0016 26.7 2.7 21 107-127 33-53 (195)
399 1u3d_A Cryptochrome 1 apoprote 24.0 1.2E+02 0.0041 27.8 6.0 45 115-160 63-108 (509)
400 2lju_A Putative oxidoreductase 23.9 52 0.0018 24.5 2.8 27 136-162 64-90 (108)
401 3out_A Glutamate racemase; str 23.8 61 0.0021 27.4 3.6 65 99-163 34-105 (268)
402 2lbw_A H/ACA ribonucleoprotein 23.4 1.8E+02 0.0063 21.3 5.9 51 123-174 29-84 (121)
403 2jfq_A Glutamate racemase; cel 23.3 1.2E+02 0.004 25.7 5.4 58 100-159 50-113 (286)
404 3fmw_A Oxygenase; mithramycin, 23.3 26 0.0009 32.7 1.3 37 68-104 444-480 (570)
405 3bzc_A TEX; helix-turn-helix, 23.0 2.1E+02 0.007 28.3 7.6 81 78-171 344-432 (785)
406 2hsz_A Novel predicted phospha 22.9 99 0.0034 24.3 4.6 32 123-154 123-154 (243)
407 1k7c_A Rhamnogalacturonan acet 22.8 1.3E+02 0.0043 24.0 5.3 42 114-155 109-166 (233)
408 1f0k_A MURG, UDP-N-acetylgluco 22.7 3.2E+02 0.011 22.4 8.0 71 97-171 183-257 (364)
409 3um9_A Haloacid dehalogenase, 22.6 1E+02 0.0035 23.3 4.5 79 120-199 102-194 (230)
410 4fe3_A Cytosolic 5'-nucleotida 22.4 60 0.002 27.0 3.3 37 120-156 147-183 (297)
411 1r4w_A Glutathione S-transfera 22.4 66 0.0022 25.7 3.4 35 99-136 6-40 (226)
412 3uhf_A Glutamate racemase; str 22.2 48 0.0017 28.3 2.7 90 78-167 27-125 (274)
413 2no4_A (S)-2-haloacid dehaloge 22.1 1.1E+02 0.0038 23.6 4.7 79 120-199 111-203 (240)
414 3kd3_A Phosphoserine phosphohy 22.0 68 0.0023 24.0 3.3 34 121-154 89-122 (219)
415 4ex6_A ALNB; modified rossman 21.9 87 0.003 24.0 4.0 58 122-179 112-183 (237)
416 3n07_A 3-deoxy-D-manno-octulos 21.6 91 0.0031 24.5 4.1 33 123-155 61-93 (195)
417 2o2x_A Hypothetical protein; s 21.5 68 0.0023 25.1 3.3 40 117-156 59-113 (218)
418 3us3_A Calsequestrin-1; calciu 21.4 1.2E+02 0.0042 26.1 5.2 100 98-199 249-354 (367)
419 3e8m_A Acylneuraminate cytidyl 21.4 1.1E+02 0.0036 22.5 4.2 53 122-174 39-96 (164)
420 3s81_A Putative aspartate race 21.4 64 0.0022 27.3 3.3 41 116-158 85-126 (268)
421 2kg4_A Growth arrest and DNA-d 21.4 82 0.0028 25.2 3.7 44 127-171 50-104 (165)
422 3m1y_A Phosphoserine phosphata 21.3 52 0.0018 25.0 2.5 36 119-154 80-115 (217)
423 3iz5_H 60S ribosomal protein L 21.3 3.8E+02 0.013 22.8 8.2 56 118-174 131-191 (258)
424 2zsk_A PH1733, 226AA long hypo 21.3 78 0.0027 25.5 3.7 55 116-170 59-114 (226)
425 3n1u_A Hydrolase, HAD superfam 21.2 94 0.0032 24.1 4.1 33 123-155 55-87 (191)
426 3mn1_A Probable YRBI family ph 21.2 99 0.0034 23.8 4.2 33 122-154 54-86 (189)
427 4had_A Probable oxidoreductase 21.0 1.2E+02 0.004 25.8 4.9 26 129-154 47-72 (350)
428 2r8e_A 3-deoxy-D-manno-octulos 20.9 1.2E+02 0.004 23.3 4.5 52 122-173 61-117 (188)
429 2vvt_A Glutamate racemase; iso 20.9 1.6E+02 0.0055 24.9 5.7 58 99-158 51-114 (290)
430 3ojc_A Putative aspartate/glut 20.8 83 0.0028 25.8 3.8 55 117-171 63-118 (231)
431 3fy4_A 6-4 photolyase; DNA rep 20.1 1E+02 0.0035 28.8 4.7 46 115-161 66-111 (537)
No 1
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=99.91 E-value=1.6e-24 Score=178.70 Aligned_cols=108 Identities=17% Similarity=0.231 Sum_probs=101.4
Q ss_pred CCCccccCcCCCcEEe-cCCCCeEeCCCccCCCeEEEEEecCCCChhHH-HHHHHHHHhHHHHHHcCCEEEE-EeCCCHH
Q 027245 66 SVSEDTKNLLDTVKVY-DVNGNAIPISDLWKDRKAVVAFARHFGCVLCR-KRADYLAAKKDVMDASGVALVL-IGPGSVE 142 (226)
Q Consensus 66 ~~~~~~g~~apdf~L~-D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~-~el~~L~~~~~~l~~~Gv~lVa-Is~~~~~ 142 (226)
.++..+|+++|+|++. |.+|++++|+++++++++||+|||+.|||+|+ +|++.|++.+++|++.|+.+|+ |+.|+++
T Consensus 12 ~~~~~vG~~aPdf~l~~~~~g~~v~L~d~~~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~gv~vv~~iS~D~~~ 91 (173)
T 3mng_A 12 SAPIKVGDAIPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVACLSVNDAF 91 (173)
T ss_dssp -CCCCTTCBCCCCEEECSSTTCEEEHHHHTTTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHH
T ss_pred CCCCCCCCCCCCeEeeeCCCCCEEEhHHHhCCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEEcCCCHH
Confidence 3457899999999999 99999999999777888999999999999999 5999999999999999999997 9999999
Q ss_pred HHHHHHHHcCCc--eeEEecCChHHHHHcCCcc
Q 027245 143 QARTFSEQTKFK--GEVYADPNHSSYEALSFVS 173 (226)
Q Consensus 143 ~i~~f~~~~~~p--fpll~Dp~~~ly~alGv~~ 173 (226)
.+++|+++.+++ ||+++|+++++.++||+..
T Consensus 92 ~~~~f~~~~~~~~~fp~l~D~~~~va~~yGv~~ 124 (173)
T 3mng_A 92 VTGEWGRAHKAEGKVRLLADPTGAFGKETDLLL 124 (173)
T ss_dssp HHHHHHHHTTCTTTCEEEECTTCHHHHHHTCBC
T ss_pred HHHHHHHHhCCCCceEEEECCChHHHHHhCCCc
Confidence 999999999998 9999999999999999974
No 2
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=99.91 E-value=1e-24 Score=175.39 Aligned_cols=105 Identities=15% Similarity=0.163 Sum_probs=93.0
Q ss_pred CccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHH
Q 027245 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTF 147 (226)
Q Consensus 68 ~~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f 147 (226)
.+++|++||+|+|.|.+|++++|+++ +++++||.|+|++|||+|+.|++.|++.++++++.|+.+|+|+.|+++.+++|
T Consensus 3 ~l~vG~~aPdF~l~~~~G~~~~l~d~-~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~vs~d~~~~~~~~ 81 (157)
T 4g2e_A 3 MVEIGELAPDFELPDTELKKVKLSAL-KGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVDPPFSNKAF 81 (157)
T ss_dssp CCCTTSBCCCCEEEBTTSCEEEGGGG-TTSCEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEEEESSCHHHHHHH
T ss_pred cCCCCCCCcCeEeECCCCCEEeHHHH-CCCeEEEEecCCCCCCccccchhhcccccccccccCceEeeecccchhHHHHH
Confidence 36899999999999999999999997 57778888888999999999999999999999999999999999999999999
Q ss_pred HHHcCCceeEEecCChHHHHHcCCcc
Q 027245 148 SEQTKFKGEVYADPNHSSYEALSFVS 173 (226)
Q Consensus 148 ~~~~~~pfpll~Dp~~~ly~alGv~~ 173 (226)
+++++++||+++|+++++.++||+..
T Consensus 82 ~~~~~~~~p~l~D~~~~v~~~ygv~~ 107 (157)
T 4g2e_A 82 KEHNKLNFTILSDYNREVVKKYNVAW 107 (157)
T ss_dssp HHHTTCCSEEEECTTSHHHHHTTCEE
T ss_pred HHHcCCcEEEEEcCCcHHHHHcCCcc
Confidence 99999999999999999999999853
No 3
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=99.91 E-value=1.4e-25 Score=182.30 Aligned_cols=105 Identities=11% Similarity=0.140 Sum_probs=99.6
Q ss_pred CccccCcCCCcEEecCCCCeEeCCCcc-CCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHH
Q 027245 68 SEDTKNLLDTVKVYDVNGNAIPISDLW-KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQART 146 (226)
Q Consensus 68 ~~~~g~~apdf~L~D~~G~~v~Lsdl~-~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~ 146 (226)
.+++|++||+|+|.|.+|++++|+++. +++++||+|||++|||+|+.|++.|++.+++|++.|+.+++|+.|+++.+++
T Consensus 4 ml~vG~~aPdF~l~~~~G~~v~Lsd~~~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~ 83 (164)
T 4gqc_A 4 LVELGEKAPDFTLPNQDFEPVNLYEVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLAISVDSPWCLKK 83 (164)
T ss_dssp CCCTTSBCCCCEEEBTTSCEEEHHHHHHTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSSSEEEEEESSCHHHHHH
T ss_pred cccCCCCCcCcEeECCCCCEEEHHHHhcCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccCceEEEecCCCHHHHHH
Confidence 368999999999999999999999986 4678899999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCceeEEecCChHHHHHcCCc
Q 027245 147 FSEQTKFKGEVYADPNHSSYEALSFV 172 (226)
Q Consensus 147 f~~~~~~pfpll~Dp~~~ly~alGv~ 172 (226)
|+++++++||+++|+++++.++||+.
T Consensus 84 ~~~~~~~~fp~l~D~~~~v~~~ygv~ 109 (164)
T 4gqc_A 84 FKDENRLAFNLLSDYNREVIKLYNVY 109 (164)
T ss_dssp HHHHTTCCSEEEECTTSHHHHHTTCE
T ss_pred HHHhcCcccceeecCchHHHHHcCCc
Confidence 99999999999999999999999984
No 4
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=99.90 E-value=1.2e-23 Score=171.77 Aligned_cols=105 Identities=12% Similarity=0.140 Sum_probs=100.3
Q ss_pred ccccCcCCCcEEe-cCCCCeEeCCCccCCCeEEEEEecCCCChhHHH-HHHHHHHhHHHHHHcCC-EEEEEeCCCHHHHH
Q 027245 69 EDTKNLLDTVKVY-DVNGNAIPISDLWKDRKAVVAFARHFGCVLCRK-RADYLAAKKDVMDASGV-ALVLIGPGSVEQAR 145 (226)
Q Consensus 69 ~~~g~~apdf~L~-D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~-el~~L~~~~~~l~~~Gv-~lVaIs~~~~~~i~ 145 (226)
+.+|+.+|+|++. |.+|++++|+++++++++||+|||+.|||+|+. |++.|++.+++|++.|+ +||+|+.|+++.++
T Consensus 3 l~~G~~aP~f~l~~~~~G~~v~L~d~~~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~~~~ 82 (167)
T 2wfc_A 3 IKEGDKLPAVTVFGATPNDKVNMAELFAGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACMAVNDSFVMD 82 (167)
T ss_dssp CCTTCBCCCCEEESSSTTCEEEHHHHTTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCEEEEEESSCHHHHH
T ss_pred CCCCCcCCCcEeecCCCCcEEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHH
Confidence 5789999999999 999999999998678899999999999999999 99999999999999999 99999999999999
Q ss_pred HHHHHcCCc--eeEEecCChHHHHHcCCcc
Q 027245 146 TFSEQTKFK--GEVYADPNHSSYEALSFVS 173 (226)
Q Consensus 146 ~f~~~~~~p--fpll~Dp~~~ly~alGv~~ 173 (226)
+|+++++++ ||+++|+++++.++||+..
T Consensus 83 ~~~~~~~~~~~fp~l~D~~~~~~~~~gv~~ 112 (167)
T 2wfc_A 83 AWGKAHGADDKVQMLADPGGAFTKAVDMEL 112 (167)
T ss_dssp HHHHHTTCTTTSEEEECTTSHHHHHTTCEE
T ss_pred HHHHhcCCCcceEEEECCCCcHHHHcCCcc
Confidence 999999999 9999999999999999964
No 5
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=99.90 E-value=5.5e-24 Score=177.04 Aligned_cols=107 Identities=12% Similarity=0.127 Sum_probs=101.4
Q ss_pred CCccccCcCCCcEEecC--CC-CeEeCCCccCCCeEEEEEecCCCChhHHH-HHHHHHHhHHHHHHcCCE-EEEEeCCCH
Q 027245 67 VSEDTKNLLDTVKVYDV--NG-NAIPISDLWKDRKAVVAFARHFGCVLCRK-RADYLAAKKDVMDASGVA-LVLIGPGSV 141 (226)
Q Consensus 67 ~~~~~g~~apdf~L~D~--~G-~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~-el~~L~~~~~~l~~~Gv~-lVaIs~~~~ 141 (226)
...++|+++|+|++.|. +| ++++|+++++++++||+|||+.|||+|+. |++.|++.+++|++.|+. ||+|+.+++
T Consensus 24 ~~l~vG~~aPdf~l~~~~~~G~~~v~L~d~~~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~ 103 (184)
T 3uma_A 24 MTIAVGDKLPNATFKEKTADGPVEVTTELLFKGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARGVDDIAVVAVNDL 103 (184)
T ss_dssp SCCCTTCBCCCCEEEEEETTEEEEEEHHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCH
T ss_pred CcCCCCCCCCCcEeecccCCCceEEeHHHHhCCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEEEEECCCH
Confidence 34789999999999998 99 99999996678889999999999999999 899999999999999999 999999999
Q ss_pred HHHHHHHHHcCCc--eeEEecCChHHHHHcCCcc
Q 027245 142 EQARTFSEQTKFK--GEVYADPNHSSYEALSFVS 173 (226)
Q Consensus 142 ~~i~~f~~~~~~p--fpll~Dp~~~ly~alGv~~ 173 (226)
+.+++|+++++++ ||+++|+++++.++||+..
T Consensus 104 ~~~~~f~~~~~~~~~fp~l~D~~~~va~~yGv~~ 137 (184)
T 3uma_A 104 HVMGAWATHSGGMGKIHFLSDWNAAFTKAIGMEI 137 (184)
T ss_dssp HHHHHHHHHHTCTTTSEEEECTTCHHHHHTTCEE
T ss_pred HHHHHHHHHhCCCCceEEEEcCchHHHHHcCCce
Confidence 9999999999999 9999999999999999974
No 6
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=99.88 E-value=1.8e-22 Score=160.82 Aligned_cols=109 Identities=12% Similarity=0.078 Sum_probs=98.6
Q ss_pred CCCCCccccCcCCCcE--EecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCH
Q 027245 64 PPSVSEDTKNLLDTVK--VYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (226)
Q Consensus 64 ~~~~~~~~g~~apdf~--L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~ 141 (226)
+.+....+|+++|+|+ +.|.+|++++|+++ +++++||+|++++|||.|+.+++.|++.++++++.|++||+|+.|++
T Consensus 2 ~~m~~l~~G~~~P~f~~~l~~~~G~~~~l~~~-~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~ 80 (163)
T 3gkn_A 2 NAMTDAVLELPAATFDLPLSLSGGTQTTLRAH-AGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRDSV 80 (163)
T ss_dssp --CCCCCCCCCGGGGGCCEECSTTCEECSGGG-TTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESSCH
T ss_pred CcccccccCCcCCCccccccCCCCCEEEHHHh-CCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCCCH
Confidence 4566688999999999 99999999999997 45555555555699999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCceeEEecCChHHHHHcCCcc
Q 027245 142 EQARTFSEQTKFKGEVYADPNHSSYEALSFVS 173 (226)
Q Consensus 142 ~~i~~f~~~~~~pfpll~Dp~~~ly~alGv~~ 173 (226)
+.+++|+++++++|+++.|++..+.++||+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 112 (163)
T 3gkn_A 81 KSHDNFCAKQGFAFPLVSDGDEALCRAFDVIK 112 (163)
T ss_dssp HHHHHHHHHHCCSSCEEECTTCHHHHHTTCEE
T ss_pred HHHHHHHHHhCCCceEEECCcHHHHHHhCCcc
Confidence 99999999999999999999999999999975
No 7
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=99.88 E-value=2.3e-22 Score=161.92 Aligned_cols=105 Identities=14% Similarity=0.134 Sum_probs=97.6
Q ss_pred ccccCcCCCcEEe--cCCC--CeEeCCCccCCCeEEEEEecCCCChhHH-HHHHHHHHhHHHHHHcCCE-EEEEeCCCHH
Q 027245 69 EDTKNLLDTVKVY--DVNG--NAIPISDLWKDRKAVVAFARHFGCVLCR-KRADYLAAKKDVMDASGVA-LVLIGPGSVE 142 (226)
Q Consensus 69 ~~~g~~apdf~L~--D~~G--~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~-~el~~L~~~~~~l~~~Gv~-lVaIs~~~~~ 142 (226)
..+|+.+|+|++. |.+| ++++|+++++++++||.|+++.|||+|+ .|++.|++.+++|++.|++ ||+|+.|+++
T Consensus 4 ~~~G~~aP~f~l~~~~~~G~~~~~~l~~~~~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~vv~Is~d~~~ 83 (162)
T 1tp9_A 4 IAVGDVLPDGKLAYFDEQDQLQEVSVHSLVAGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCISVNDPF 83 (162)
T ss_dssp CCTTCBCCCCEEEEECTTSCEEEEESHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCEEEEESSCHH
T ss_pred CCCCCCCCCeEEEeecCCCCceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHH
Confidence 5789999999986 8999 9999999557777778887899999999 8999999999999999999 9999999999
Q ss_pred HHHHHHHHcCC--ceeEEecCChHHHHHcCCcc
Q 027245 143 QARTFSEQTKF--KGEVYADPNHSSYEALSFVS 173 (226)
Q Consensus 143 ~i~~f~~~~~~--pfpll~Dp~~~ly~alGv~~ 173 (226)
.+++|++++++ +||+++|+++++.++||+..
T Consensus 84 ~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~ 116 (162)
T 1tp9_A 84 VMKAWAKSYPENKHVKFLADGSATYTHALGLEL 116 (162)
T ss_dssp HHHHHHHTCTTCSSEEEEECTTSHHHHHTTCEE
T ss_pred HHHHHHHhcCCCCCeEEEECCCchHHHHcCccc
Confidence 99999999999 99999999999999999973
No 8
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=99.88 E-value=8.8e-23 Score=166.80 Aligned_cols=105 Identities=19% Similarity=0.285 Sum_probs=95.9
Q ss_pred ccccCcCCCcEEecC----CC-----CeEeCCCccCCCeEEEEEecCCCChhHHHH-HHHHHHhHHHHHHcCCE-EEEEe
Q 027245 69 EDTKNLLDTVKVYDV----NG-----NAIPISDLWKDRKAVVAFARHFGCVLCRKR-ADYLAAKKDVMDASGVA-LVLIG 137 (226)
Q Consensus 69 ~~~g~~apdf~L~D~----~G-----~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~e-l~~L~~~~~~l~~~Gv~-lVaIs 137 (226)
..+|+.+|+|++.|. +| ++++|+++++++++||+|||++|||+|+.| ++.|++.+++|++.|+. ||+|+
T Consensus 7 ~~~g~~aP~f~l~~~~~~~~G~~~~~~~v~l~~~~~gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g~~~vv~Is 86 (171)
T 2pwj_A 7 TDILSAASNVSLQKARTWDEGVESKFSTTPVNDIFKDKKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKGVDSVICVA 86 (171)
T ss_dssp ---CCCSSSBCCCSCEECCCSSCTTCCCEEHHHHHTTSEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTTCSEEEEEE
T ss_pred ccccCcCCCeEEecccccccCCccCcceEEHHHHhCCCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEe
Confidence 456779999999998 57 999999976777899999999999999999 99999999999999999 99999
Q ss_pred CCCHHHHHHHHHHcCC--ceeEEecCChHHHHHcCCcc
Q 027245 138 PGSVEQARTFSEQTKF--KGEVYADPNHSSYEALSFVS 173 (226)
Q Consensus 138 ~~~~~~i~~f~~~~~~--pfpll~Dp~~~ly~alGv~~ 173 (226)
.++++.+++|++++++ +||+++|+++++.++||+..
T Consensus 87 ~d~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~ygv~~ 124 (171)
T 2pwj_A 87 INDPYTVNAWAEKIQAKDAIEFYGDFDGSFHKSLELTT 124 (171)
T ss_dssp SSCHHHHHHHHHHTTCTTTSEEEECTTCHHHHHHTCEE
T ss_pred CCCHHHHHHHHHHhCCCCceEEEECCccHHHHHhCCcc
Confidence 9999999999999996 79999999999999999863
No 9
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=99.87 E-value=1.2e-22 Score=166.44 Aligned_cols=108 Identities=10% Similarity=0.066 Sum_probs=99.1
Q ss_pred CCCCccccCc----CCCcEEecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCC
Q 027245 65 PSVSEDTKNL----LDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (226)
Q Consensus 65 ~~~~~~~g~~----apdf~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~ 140 (226)
....+++|+. +|+|++.|.+|++++|+++ +++++||+|++++|||.|+.+++.|++.++++++.|+.||+|+.|+
T Consensus 17 ~~~~l~~Gd~ig~~aP~f~l~~~~G~~v~l~d~-~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D~ 95 (179)
T 3ixr_A 17 RGSHMNIGDTLNHSLLNHPLMLSGSTCKTLSDY-TNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRDS 95 (179)
T ss_dssp -CCSSCTTCBCCHHHHHCCEEEGGGEEECGGGG-TTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESCC
T ss_pred CCcccCcCcccCCcCCCeeEECCCCCEEeHHHH-CCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCCC
Confidence 4445677777 9999999999999999997 5667888888899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCceeEEecCChHHHHHcCCcc
Q 027245 141 VEQARTFSEQTKFKGEVYADPNHSSYEALSFVS 173 (226)
Q Consensus 141 ~~~i~~f~~~~~~pfpll~Dp~~~ly~alGv~~ 173 (226)
.+.+++|+++++++||+++|++.++.++||+..
T Consensus 96 ~~~~~~~~~~~~~~f~~l~D~~~~~~~~~gv~~ 128 (179)
T 3ixr_A 96 VKSHDSFCAKQGFTFPLVSDSDAILCKAFDVIK 128 (179)
T ss_dssp HHHHHHHHHHHTCCSCEEECTTCHHHHHTTCEE
T ss_pred HHHHHHHHHHcCCceEEEECCchHHHHHcCCcc
Confidence 999999999999999999999999999999964
No 10
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=99.87 E-value=4.1e-22 Score=158.89 Aligned_cols=108 Identities=9% Similarity=0.140 Sum_probs=96.7
Q ss_pred CCCccccCcCCCcEEecCCCCeEeCCCccCCCe-EEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHH
Q 027245 66 SVSEDTKNLLDTVKVYDVNGNAIPISDLWKDRK-AVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQA 144 (226)
Q Consensus 66 ~~~~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~-vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i 144 (226)
.....+|+.+|+|++.|.+|++++|+++.++++ +||.||+++|||+|+.+++.|++.++++++.| .||+|+.|+++.+
T Consensus 4 ~~~~~~G~~~P~f~l~~~~G~~v~l~~~~gk~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~-~vv~is~d~~~~~ 82 (159)
T 2a4v_A 4 VNELEIGDPIPDLSLLNEDNDSISLKKITENNRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYA-AVFGLSADSVTSQ 82 (159)
T ss_dssp TTCCCTTCBCCSCEEECTTSCEEEHHHHHHHCSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTC-EEEEEESCCHHHH
T ss_pred CCcCCCCCCCCCeEEECCCCCEEeHHHHhCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCC-cEEEEeCCCHHHH
Confidence 344788999999999999999999999854333 45555579999999999999999999999999 9999999999999
Q ss_pred HHHHHHcCCceeEEecCChHHHHHcCCccc
Q 027245 145 RTFSEQTKFKGEVYADPNHSSYEALSFVSG 174 (226)
Q Consensus 145 ~~f~~~~~~pfpll~Dp~~~ly~alGv~~~ 174 (226)
++|+++++++||+++|+++.++++||+...
T Consensus 83 ~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~ 112 (159)
T 2a4v_A 83 KKFQSKQNLPYHLLSDPKREFIGLLGAKKT 112 (159)
T ss_dssp HHHHHHHTCSSEEEECTTCHHHHHHTCBSS
T ss_pred HHHHHHhCCCceEEECCccHHHHHhCCccc
Confidence 999999999999999999999999999754
No 11
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.87 E-value=1.8e-21 Score=155.71 Aligned_cols=104 Identities=15% Similarity=0.176 Sum_probs=96.1
Q ss_pred ccccCcCCCcEEecCCCCeEeCCCccCCCe-EEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHH
Q 027245 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRK-AVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTF 147 (226)
Q Consensus 69 ~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~-vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f 147 (226)
+.+|+++|+|++.|.+|++++|+++ ++++ +||.|++++|||+|+.+++.|++.++++++.|+.+|+|+.|+.+.+++|
T Consensus 2 l~~G~~~P~f~l~~~~G~~~~l~~~-~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~ 80 (161)
T 3drn_A 2 VKVGDKAPLFEGIADNGEKISLSDY-IGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSDDINSHKRF 80 (161)
T ss_dssp CCTTSBCCCCEEEETTSCEEEGGGT-TTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESCCHHHHHHH
T ss_pred CCCCCcCCCeEeecCCCCEEEHHHh-cCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHH
Confidence 4689999999999999999999997 4555 5555555999999999999999999999999999999999999999999
Q ss_pred HHHcCCceeEEecCChHHHHHcCCcc
Q 027245 148 SEQTKFKGEVYADPNHSSYEALSFVS 173 (226)
Q Consensus 148 ~~~~~~pfpll~Dp~~~ly~alGv~~ 173 (226)
+++++++|+++.|++..+.++||+..
T Consensus 81 ~~~~~~~~~~~~d~~~~~~~~~~v~~ 106 (161)
T 3drn_A 81 KEKYKLPFILVSDPDKKIRELYGAKG 106 (161)
T ss_dssp HHHTTCCSEEEECTTSHHHHHTTCCC
T ss_pred HHHhCCCceEEECCcHHHHHHcCCCC
Confidence 99999999999999999999999974
No 12
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=99.85 E-value=2.6e-21 Score=160.91 Aligned_cols=107 Identities=11% Similarity=0.114 Sum_probs=98.5
Q ss_pred CCccccCcCCCcEEecCCC----------CeEeCCCccCCCeEEEEEecCCCChhHHH-HHHHHHHhHHHHHHcCC-EEE
Q 027245 67 VSEDTKNLLDTVKVYDVNG----------NAIPISDLWKDRKAVVAFARHFGCVLCRK-RADYLAAKKDVMDASGV-ALV 134 (226)
Q Consensus 67 ~~~~~g~~apdf~L~D~~G----------~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~-el~~L~~~~~~l~~~Gv-~lV 134 (226)
+..++||++|++++.-..+ ++++|+++++++++||+|||+.|||.|.. |++.+++.+++|+++|+ +|+
T Consensus 8 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~vsLsd~~~Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~g~d~Vi 87 (176)
T 4f82_A 8 HMIQVGDALPDAQLFEFIDDAREGCTLGPNACSVRDQVAGKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAAGIDEIW 87 (176)
T ss_dssp CCCCTTCBCCCCEEEEEECSCCTTCCSEEEEEEHHHHHTTCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCEEE
T ss_pred hhhhcCCcCCceEEEEecccccccccCCceEEeHHHHhCCCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCCCCEEE
Confidence 4568999999988764322 78999998788899999999999999999 99999999999999999 999
Q ss_pred EEeCCCHHHHHHHHHHcCCc--eeEEecCChHHHHHcCCcc
Q 027245 135 LIGPGSVEQARTFSEQTKFK--GEVYADPNHSSYEALSFVS 173 (226)
Q Consensus 135 aIs~~~~~~i~~f~~~~~~p--fpll~Dp~~~ly~alGv~~ 173 (226)
+||.|++...++|+++.+++ ||+++|+++++.++||+..
T Consensus 88 gIS~D~~~~~~~f~~~~~l~~~f~lLsD~~~~va~ayGv~~ 128 (176)
T 4f82_A 88 CVSVNDAFVMGAWGRDLHTAGKVRMMADGSAAFTHALGLTQ 128 (176)
T ss_dssp EEESSCHHHHHHHHHHTTCTTTSEEEECTTCHHHHHHTCEE
T ss_pred EEeCCCHHHHHHHHHHhCCCCCceEEEcCchHHHHHhCCCc
Confidence 99999999999999999999 9999999999999999963
No 13
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=99.85 E-value=2.4e-21 Score=160.26 Aligned_cols=106 Identities=15% Similarity=0.113 Sum_probs=99.2
Q ss_pred CccccCcCCCcEEecCCC-CeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCE-EEEEeCCCHHHHH
Q 027245 68 SEDTKNLLDTVKVYDVNG-NAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVA-LVLIGPGSVEQAR 145 (226)
Q Consensus 68 ~~~~g~~apdf~L~D~~G-~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~-lVaIs~~~~~~i~ 145 (226)
..++|+++|+|+|.+.++ +.++|+++++++++||+||++.|||.|..|++.+++.+++|+++|++ |++||+|++...+
T Consensus 13 ~~~vGd~aPdf~l~~~g~~~~v~L~d~~~gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~gv~~VigIS~D~~~~~~ 92 (171)
T 2xhf_A 13 PIKVGDIIPDVLVYEDVPSKSFPIHDVFRGRKGILFSVVGAFVPGSNNHIPEYLSLYDKFKEEGYHTIACIAVNDPFVMA 92 (171)
T ss_dssp CCCTTCBCCCCEEECSSTTCEEETHHHHTTSEEEEEECSCTTCTTTTSSHHHHHHTHHHHHHTTCCEEEEEESSCHHHHH
T ss_pred cccCcCCCCCeEEecCCCCcEEEhHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHH
Confidence 378999999999995442 89999997788899999999999999999999999999999999996 9999999999999
Q ss_pred HHHHHcCC--ceeEEecCChHHHHHcCCcc
Q 027245 146 TFSEQTKF--KGEVYADPNHSSYEALSFVS 173 (226)
Q Consensus 146 ~f~~~~~~--pfpll~Dp~~~ly~alGv~~ 173 (226)
+|+++.++ +|++++|+++++.++||+..
T Consensus 93 ~w~~~~~~~~~f~lLSD~~~~~a~ayGv~~ 122 (171)
T 2xhf_A 93 AWGKTVDPEHKIRMLADMHGEFTRALGTEL 122 (171)
T ss_dssp HHHHHHCTTCCSEEEECTTSHHHHHHTCBC
T ss_pred HHHHhcCCCCCeEEEEeCCchHHHHhCCce
Confidence 99999999 99999999999999999974
No 14
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=99.85 E-value=3.5e-21 Score=164.08 Aligned_cols=105 Identities=12% Similarity=0.134 Sum_probs=97.2
Q ss_pred ccccCcCCCcEEecC-CCC--eEeCCCccCCCeEEEEEecCCCChhHH-HHHHHHHHhHHHHHHcCC-EEEEEeCCCHHH
Q 027245 69 EDTKNLLDTVKVYDV-NGN--AIPISDLWKDRKAVVAFARHFGCVLCR-KRADYLAAKKDVMDASGV-ALVLIGPGSVEQ 143 (226)
Q Consensus 69 ~~~g~~apdf~L~D~-~G~--~v~Lsdl~~~~~vVVvF~R~~~Cp~C~-~el~~L~~~~~~l~~~Gv-~lVaIs~~~~~~ 143 (226)
..+|+.+|+|++.|. +|+ +++|+++++++++||.|+|++|||+|+ .|++.|++.+++|++.|+ .||+|+.|+++.
T Consensus 3 ~~~G~~aP~f~l~~~~~g~~~~v~l~~~~~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~is~d~~~~ 82 (241)
T 1nm3_A 3 SMEGKKVPQVTFRTRQGDKWVDVTTSELFDNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVNDTFV 82 (241)
T ss_dssp CCTTSBCCCCEEEEEETTEEEEEEHHHHHTTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSCHHH
T ss_pred ccCCCCCCCeEEEcccCCCceeecHHHHhCCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEcCCHHH
Confidence 568999999999996 787 999999557778888888899999999 999999999999999999 999999999999
Q ss_pred HHHHHHHcCCc-eeEEecCChHHHHHcCCcc
Q 027245 144 ARTFSEQTKFK-GEVYADPNHSSYEALSFVS 173 (226)
Q Consensus 144 i~~f~~~~~~p-fpll~Dp~~~ly~alGv~~ 173 (226)
+++|+++++++ ||+++|+++++.++||+..
T Consensus 83 ~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~ 113 (241)
T 1nm3_A 83 MNAWKEDEKSENISFIPDGNGEFTEGMGMLV 113 (241)
T ss_dssp HHHHHHHTTCTTSEEEECTTSHHHHHTTCEE
T ss_pred HHHHHHhcCCCceEEEECCCcHHHHHhCcee
Confidence 99999999997 9999999999999999863
No 15
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=99.84 E-value=7.8e-21 Score=152.88 Aligned_cols=102 Identities=11% Similarity=0.155 Sum_probs=94.8
Q ss_pred CccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHH
Q 027245 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTF 147 (226)
Q Consensus 68 ~~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f 147 (226)
.+.+|+++|+|++.|.+|++++|+++ +++++||+|+++.|||+|+.+++.|++.+++ .|+.+|+|+.|+++.+++|
T Consensus 19 ~l~~G~~aP~f~l~~~~G~~~~l~~~-~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~---~~~~vv~is~d~~~~~~~~ 94 (166)
T 3p7x_A 19 QINEGDFAPDFTVLDNDLNQVTLADY-AGKKKLISVVPSIDTGVCDQQTRKFNSDASK---EEGIVLTISADLPFAQKRW 94 (166)
T ss_dssp CCCTTSBCCCCEEECTTSCEEEGGGG-TTSCEEEEECSCTTSHHHHHHHHHHHHHSCT---TTSEEEEEESSCHHHHHHH
T ss_pred cCCCCCCCCCeEEEcCCCCEEeHHHh-CCCcEEEEEECCCCCCccHHHHHHHHHHhhc---CCCEEEEEECCCHHHHHHH
Confidence 36789999999999999999999997 5677888887899999999999999999887 7999999999999999999
Q ss_pred HHHcCC-ceeEEecC-ChHHHHHcCCcc
Q 027245 148 SEQTKF-KGEVYADP-NHSSYEALSFVS 173 (226)
Q Consensus 148 ~~~~~~-pfpll~Dp-~~~ly~alGv~~ 173 (226)
++++++ +||+++|+ ++.+.++||+..
T Consensus 95 ~~~~~~~~~~~l~D~~~~~~~~~~gv~~ 122 (166)
T 3p7x_A 95 CASAGLDNVITLSDHRDLSFGENYGVVM 122 (166)
T ss_dssp HHHHTCSSCEEEECTTTCHHHHHHTCEE
T ss_pred HHHcCCCceEEccCCchhHHHHHhCCcc
Confidence 999999 89999999 999999999974
No 16
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=99.84 E-value=8.5e-21 Score=161.69 Aligned_cols=107 Identities=10% Similarity=0.055 Sum_probs=94.8
Q ss_pred CCCccccCcCCCcEEecC--CC--CeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCH
Q 027245 66 SVSEDTKNLLDTVKVYDV--NG--NAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (226)
Q Consensus 66 ~~~~~~g~~apdf~L~D~--~G--~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~ 141 (226)
|+...+|+.+|+|++.|. +| ++++|+++++++++||.|++++|||+|+.+++.|++++++|++.|++||+|+.|+.
T Consensus 22 M~~l~~G~~aP~F~l~~~~~~G~~~~v~L~d~~~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D~~ 101 (221)
T 2c0d_A 22 MKLSLVTKKAYNFTAQGLNKNNEIINVDLSSFIGQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVDSV 101 (221)
T ss_dssp ----CTTSBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESSCH
T ss_pred cccCCCCCCCCCeEEeccccCCCccEEeHHHHcCCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCCCH
Confidence 445689999999999998 99 99999997567666555555999999999999999999999999999999999999
Q ss_pred HHHHHHHHHc-------CCceeEEecCChHHHHHcCCc
Q 027245 142 EQARTFSEQT-------KFKGEVYADPNHSSYEALSFV 172 (226)
Q Consensus 142 ~~i~~f~~~~-------~~pfpll~Dp~~~ly~alGv~ 172 (226)
+.+++|+++. +++||++.|+++++.++||+.
T Consensus 102 ~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~ 139 (221)
T 2c0d_A 102 YSHLAWKNMPIEKGGIGNVEFTLVSDINKDISKNYNVL 139 (221)
T ss_dssp HHHHHHHHSCGGGTCCCSCSSEEEECTTSHHHHHTTCE
T ss_pred HHHHHHHHHhhhhcCccCCceEEEECCchHHHHHcCCc
Confidence 9999999998 789999999999999999994
No 17
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=99.84 E-value=1.4e-20 Score=149.02 Aligned_cols=103 Identities=13% Similarity=0.162 Sum_probs=95.3
Q ss_pred ccccCcCCCcEEecCCCCeEeCCCccCCC-eEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHH
Q 027245 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDR-KAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTF 147 (226)
Q Consensus 69 ~~~g~~apdf~L~D~~G~~v~Lsdl~~~~-~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f 147 (226)
..+|+.+|+|++.|.+|+.++++++ +++ ++||.|+|++||++|+.+++.|.+.++++++.|+.+|+|+.|+.+.+++|
T Consensus 9 ~~~G~~~p~f~l~~~~G~~~~l~~~-~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~~~~~~~~ 87 (160)
T 1xvw_A 9 LNVGATAPDFTLRDQNQQLVTLRGY-RGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGPPPTHKIW 87 (160)
T ss_dssp CCTTSBCCCCEEECTTSCEEEGGGG-TTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCCHHHHHHH
T ss_pred CCCCCCCCCeEeEcCCCCEEeHHHh-cCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCCHHHHHHH
Confidence 6789999999999999999999997 455 66666667999999999999999999999888999999999999999999
Q ss_pred HHHcCCceeEEecC--ChHHHHHcCCc
Q 027245 148 SEQTKFKGEVYADP--NHSSYEALSFV 172 (226)
Q Consensus 148 ~~~~~~pfpll~Dp--~~~ly~alGv~ 172 (226)
+++++++|+++.|. +..+.+.||+.
T Consensus 88 ~~~~~~~~~~~~d~~~~~~~~~~~~v~ 114 (160)
T 1xvw_A 88 ATQSGFTFPLLSDFWPHGAVSQAYGVF 114 (160)
T ss_dssp HHHHTCCSCEEECTTTTTHHHHHTTCE
T ss_pred HHhcCCCceEEecCCcChHHHHHcCCc
Confidence 99999999999995 99999999997
No 18
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=99.84 E-value=8e-21 Score=162.13 Aligned_cols=103 Identities=16% Similarity=0.118 Sum_probs=96.5
Q ss_pred ccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHH
Q 027245 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFS 148 (226)
Q Consensus 69 ~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~ 148 (226)
+.+|+.+|+|++.|.+| +++|+++.+++++||+|||+.|||+|..|+++|++++++|++.|++||+|+.|+.+.+++|+
T Consensus 5 l~~G~~aP~F~l~~~~G-~v~l~d~~Gk~~vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~IS~D~~~~~~~~~ 83 (224)
T 1prx_A 5 LLLGDVAPNFEANTTVG-RIRFHDFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLIALSIDSVEDHLAWS 83 (224)
T ss_dssp CCTTCBCCCCEEEETTE-EEEHHHHHTTSEEEEEEESCSSCHHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHH
T ss_pred CCCcCCCCCcEEecCCC-CEEHHHHcCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH
Confidence 57899999999999999 99999986545799999999999999999999999999999999999999999998889999
Q ss_pred HH----------cCCceeEEecCChHHHHHcCCc
Q 027245 149 EQ----------TKFKGEVYADPNHSSYEALSFV 172 (226)
Q Consensus 149 ~~----------~~~pfpll~Dp~~~ly~alGv~ 172 (226)
++ .+++||+++|+++++.++||+.
T Consensus 84 ~~i~~~~~~~~~~~~~fpil~D~~~~va~~ygv~ 117 (224)
T 1prx_A 84 KDINAYNSEEPTEKLPFPIIDDRNRELAILLGML 117 (224)
T ss_dssp HHHHHHTTSCCCSCCSSCEEECTTCHHHHHTTSS
T ss_pred HHHHHhhCcccccCcCcceeecCchHHHHHhCCC
Confidence 87 8999999999999999999985
No 19
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=99.84 E-value=1.7e-20 Score=150.53 Aligned_cols=102 Identities=7% Similarity=0.112 Sum_probs=92.2
Q ss_pred ccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHH
Q 027245 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFS 148 (226)
Q Consensus 69 ~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~ 148 (226)
..+|+.+|+|++.|.+|++++++++ +++++||.|+++.|||+|+.+++.|++.++++ .|+++|+|+.|+++.+++|+
T Consensus 16 ~~~G~~~P~f~l~~~~G~~v~l~~~-~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~--~~v~vv~is~d~~~~~~~~~ 92 (163)
T 1psq_A 16 LQVGDKALDFSLTTTDLSKKSLADF-DGKKKVLSVVPSIDTGICSTQTRRFNEELAGL--DNTVVLTVSMDLPFAQKRWC 92 (163)
T ss_dssp CCTTSBCCCCEEECTTSCEEEGGGG-TTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--TTEEEEEEESSCHHHHHHHH
T ss_pred CCCCCCCCCEEEEcCCCcEeeHHHh-CCCEEEEEEECCCCCCccHHHHHHHHHHHHHc--CCcEEEEEECCCHHHHHHHH
Confidence 5789999999999999999999997 45555454444799999999999999999999 79999999999999999999
Q ss_pred HHcCC-ceeEEec-CChHHHHHcCCcc
Q 027245 149 EQTKF-KGEVYAD-PNHSSYEALSFVS 173 (226)
Q Consensus 149 ~~~~~-pfpll~D-p~~~ly~alGv~~ 173 (226)
+++++ +||++.| +++.+.++||+..
T Consensus 93 ~~~~~~~~~~l~D~~~~~~~~~~gv~~ 119 (163)
T 1psq_A 93 GAEGLDNAIMLSDYFDHSFGRDYALLI 119 (163)
T ss_dssp HHHTCTTSEEEECTTTCHHHHHHTCBC
T ss_pred HhcCCCCcEEecCCchhHHHHHhCCcc
Confidence 99999 9999999 8999999999974
No 20
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=99.83 E-value=5.3e-21 Score=164.13 Aligned_cols=105 Identities=10% Similarity=0.057 Sum_probs=97.3
Q ss_pred CccccCcCCCcE----EecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHH
Q 027245 68 SEDTKNLLDTVK----VYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ 143 (226)
Q Consensus 68 ~~~~g~~apdf~----L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~ 143 (226)
...+|++||||+ +.|.+|++|+|+|+ +++++||+||+..|||.|..|++++++.+++|++.|++||+||+|+...
T Consensus 25 ~~~vG~~APdF~~~a~l~d~~g~~vsLsd~-~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~g~~vigiS~Ds~~s 103 (219)
T 3tue_A 25 NAKINSPAPSFEEVALMPNGSFKKISLSSY-KGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNELNCEVLACSIDSEYA 103 (219)
T ss_dssp CCCTTSBCCCCEEEEECTTSCEEEEEGGGG-TTSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHTTTEEEEEEESSCHHH
T ss_pred ccccCCcCCCCcccccccCCCCcEEehHHh-CCCEEEEEEecccCCCCCchhHhhHHHHHhhhccCCcEEEEeeCCchhh
Confidence 357999999999 55889999999997 5789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHc-------CCceeEEecCChHHHHHcCCcc
Q 027245 144 ARTFSEQT-------KFKGEVYADPNHSSYEALSFVS 173 (226)
Q Consensus 144 i~~f~~~~-------~~pfpll~Dp~~~ly~alGv~~ 173 (226)
.++|+++. +++|||++|+++++.++||+..
T Consensus 104 h~~w~~~~~~~~~~~~l~fpllsD~~~~va~~yGv~~ 140 (219)
T 3tue_A 104 HLQWTLQDRKKGGLGTMAIPILADKTKNIARSYGVLE 140 (219)
T ss_dssp HHHHHHSCGGGTCCCSCSSCEEECTTSHHHHHTTCEE
T ss_pred HHHHhhhhHHhcCccccccccccCcccHHHHHcCCcc
Confidence 99999764 6899999999999999999963
No 21
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=99.83 E-value=7e-21 Score=158.74 Aligned_cols=103 Identities=15% Similarity=0.191 Sum_probs=96.0
Q ss_pred cccCcCCCcEEec--C---------CC----CeEeCCCccCCCeEEEEEecCCCChhHH-HHHHHHHHhHHHH-HHcCCE
Q 027245 70 DTKNLLDTVKVYD--V---------NG----NAIPISDLWKDRKAVVAFARHFGCVLCR-KRADYLAAKKDVM-DASGVA 132 (226)
Q Consensus 70 ~~g~~apdf~L~D--~---------~G----~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~-~el~~L~~~~~~l-~~~Gv~ 132 (226)
++|+++|+|++.+ . +| +.++|+++++++++||+|||+.|||.|. .|++.+++.+++| ++.|+.
T Consensus 2 ~vGd~aPdf~l~~~~~~~~~~~~~~~G~~~~~~v~l~d~~~gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~~g~~ 81 (182)
T 1xiy_A 2 KENDLIPNVKVMIDVRNMNNISDTDGSPNDFTSIDTHELFNNKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKENNFD 81 (182)
T ss_dssp CTTCBCCCCEEEEEHHHHTC--------CCEEEEEHHHHSTTCEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTSCCS
T ss_pred CCCCCCCCeEEEcccccccccccccCCCccceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhCCCc
Confidence 5799999999998 4 67 7999999778889999999999999999 9999999999999 999995
Q ss_pred -EEEEeCCCHHHHHHHHHHcCC-ceeEEecCChHHHHHcCCc
Q 027245 133 -LVLIGPGSVEQARTFSEQTKF-KGEVYADPNHSSYEALSFV 172 (226)
Q Consensus 133 -lVaIs~~~~~~i~~f~~~~~~-pfpll~Dp~~~ly~alGv~ 172 (226)
|++||.+++..+++|+++.++ +|++++|+++++.++||+.
T Consensus 82 ~V~gvS~D~~~~~~~~~~~~~~~~f~lLsD~~~~~a~~yGv~ 123 (182)
T 1xiy_A 82 DIYCITNNDIYVLKSWFKSMDIKKIKYISDGNSSFTDSMNML 123 (182)
T ss_dssp EEEEEESSCHHHHHHHHHHTTCCSSEEEECTTSHHHHHTTCE
T ss_pred EEEEEeCCCHHHHHHHHHHcCCCCceEEEeCchHHHHHhCCc
Confidence 999999999999999999999 6999999999999999996
No 22
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=99.83 E-value=9.9e-21 Score=155.97 Aligned_cols=102 Identities=14% Similarity=0.128 Sum_probs=92.6
Q ss_pred cccCcCCCcEEecC-CC--CeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHH
Q 027245 70 DTKNLLDTVKVYDV-NG--NAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQART 146 (226)
Q Consensus 70 ~~g~~apdf~L~D~-~G--~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~ 146 (226)
.+|+.+|+|++.|. +| ++++|+++ +++++||.|++++|||+|+.|++.|++.+++|++.|++||+|+.++.+.+++
T Consensus 2 ~~G~~aP~f~l~~~~~G~~~~v~l~~~-~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~ 80 (186)
T 1n8j_A 2 LINTKIKPFKNQAFKNGEFIEVTEKDT-EGRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKA 80 (186)
T ss_dssp CTTCBCCCCEEEEEETTEEEEEEHHHH-TTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHH
T ss_pred CCCCcCCCcEeecccCCcceEEEHHHH-CCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHH
Confidence 57999999999999 59 89999997 4555555554579999999999999999999999999999999999999999
Q ss_pred HHHHc----CCceeEEecCChHHHHHcCCc
Q 027245 147 FSEQT----KFKGEVYADPNHSSYEALSFV 172 (226)
Q Consensus 147 f~~~~----~~pfpll~Dp~~~ly~alGv~ 172 (226)
|++++ +++||+++|+++.+.++||+.
T Consensus 81 ~~~~~~~~~~~~fp~l~D~~~~~~~~ygv~ 110 (186)
T 1n8j_A 81 WHSSSETIAKIKYAMIGDPTGALTRNFDNM 110 (186)
T ss_dssp HHHHCTTGGGCCSEEEECTTSHHHHHTTCE
T ss_pred HHHHcCcccCCceeEEECCchHHHHHhCCc
Confidence 99999 899999999999999999986
No 23
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=99.83 E-value=7.2e-21 Score=153.20 Aligned_cols=102 Identities=9% Similarity=0.149 Sum_probs=93.2
Q ss_pred ccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHH
Q 027245 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFS 148 (226)
Q Consensus 69 ~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~ 148 (226)
..+|+.+|+|++.|.+|++++|+++ +++++||.|+++.|||+|+.+++.|++.++++ .|++||+|+.|+++.+++|+
T Consensus 17 ~~~G~~~P~f~l~~~~G~~v~l~~~-~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~--~~v~vv~Is~d~~~~~~~~~ 93 (165)
T 1q98_A 17 PQVGEIVENFILVGNDLADVALNDF-ASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL--SNTIVLCISADLPFAQARFC 93 (165)
T ss_dssp CCTTCBCCCCEEECTTSCEEEGGGG-TTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS--TTEEEEEEESSCHHHHTTCT
T ss_pred CCCCCCCCCeEEECCCCCEEehHHh-CCCeEEEEEECCCCCCccHHHHHHHHHHHHHc--CCCEEEEEeCCCHHHHHHHH
Confidence 6789999999999999999999997 56666666666999999999999999999999 79999999999999999999
Q ss_pred HHcCC-ceeEEecC-ChHHHHHcCCcc
Q 027245 149 EQTKF-KGEVYADP-NHSSYEALSFVS 173 (226)
Q Consensus 149 ~~~~~-pfpll~Dp-~~~ly~alGv~~ 173 (226)
+++++ +|++++|+ ++.+.++||+..
T Consensus 94 ~~~~~~~~~~l~D~~~~~~~~~~gv~~ 120 (165)
T 1q98_A 94 GAEGIENAKTVSTFRNHALHSQLGVDI 120 (165)
T ss_dssp TTTTCTTEEEEECTTCTHHHHHTTCEE
T ss_pred HHcCCCceEEeeccccchHHHHhCcee
Confidence 99999 79999998 899999999864
No 24
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=99.83 E-value=1.6e-20 Score=151.47 Aligned_cols=101 Identities=13% Similarity=0.112 Sum_probs=92.4
Q ss_pred ccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHH
Q 027245 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFS 148 (226)
Q Consensus 69 ~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~ 148 (226)
..+|+.+|+|++.|.+|++++++++ +++++||.|++++|||+|+.+++.|++.++++ .|+++|+|+.|+++.+++|+
T Consensus 21 l~~g~~~P~f~l~~~~G~~~~l~~~-~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~--~~v~vv~Is~d~~~~~~~~~ 97 (171)
T 2yzh_A 21 LKVGDRAPEAVVVTKDLQEKIVGGA-KDVVQVIITVPSLDTPVCETETKKFNEIMAGM--EGVDVTVVSMDLPFAQKRFC 97 (171)
T ss_dssp CCTTSBCCCEEEEETTSCEEEESSC-CSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--TTEEEEEEESSCHHHHHHHH
T ss_pred CCCCCcCCceEEECCCCCEeeHHHh-CCCeEEEEEECCCCCCchHHHHHHHHHHHHHc--CCceEEEEeCCCHHHHHHHH
Confidence 6789999999999999999999997 56666666666999999999999999999999 79999999999999999999
Q ss_pred HHcCC-ceeEEec-CChHHHHHcCCcc
Q 027245 149 EQTKF-KGEVYAD-PNHSSYEALSFVS 173 (226)
Q Consensus 149 ~~~~~-pfpll~D-p~~~ly~alGv~~ 173 (226)
+++++ +|++++| +++.+ ++||+..
T Consensus 98 ~~~~~~~~~~l~D~~~~~~-~~~gv~~ 123 (171)
T 2yzh_A 98 ESFNIQNVTVASDFRYRDM-EKYGVLI 123 (171)
T ss_dssp HHTTCCSSEEEECTTTCGG-GGGTCBB
T ss_pred HHcCCCCeEEeecCccCcH-HHhCCEe
Confidence 99999 9999999 89999 9999864
No 25
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=99.83 E-value=1.3e-20 Score=161.47 Aligned_cols=104 Identities=13% Similarity=0.123 Sum_probs=96.4
Q ss_pred ccccCcCCCcEEe---cCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHH
Q 027245 69 EDTKNLLDTVKVY---DVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQAR 145 (226)
Q Consensus 69 ~~~g~~apdf~L~---D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~ 145 (226)
..+|++||||++. |.+|++++|+|+ +++++||+||+..|||.|..|++++++.+++|++.|++||+||.|+....+
T Consensus 23 ~~VG~~APdF~l~a~~d~~~~~vsLsd~-~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~g~~vigiS~Ds~~sh~ 101 (216)
T 3sbc_A 23 AQVQKQAPTFKKTAVVDGVFDEVSLDKY-KGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQGAQVLFASTDSEYSLL 101 (216)
T ss_dssp CCTTSBCCCCCEEEEETTEEEEECGGGG-TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHH
T ss_pred hhcCCcCCCCCCcceECCCCcEEehHHh-CCCeEEEEEEcCCCCCcCchhhhHHHHhHHhhccCCceEEEeecCchhhHH
Confidence 5899999999875 778899999997 578899999999999999999999999999999999999999999999999
Q ss_pred HHHHHc-------CCceeEEecCChHHHHHcCCcc
Q 027245 146 TFSEQT-------KFKGEVYADPNHSSYEALSFVS 173 (226)
Q Consensus 146 ~f~~~~-------~~pfpll~Dp~~~ly~alGv~~ 173 (226)
+|++.. +++|||++|+++++.++||+..
T Consensus 102 aw~~~~~~~~~~~~l~fpllsD~~~~vak~YGv~~ 136 (216)
T 3sbc_A 102 AWTNIPRKEGGLGPINIPLLADTNHSLSRDYGVLI 136 (216)
T ss_dssp HHHTSCGGGTCCCSCSSCEEECTTSHHHHHHTCEE
T ss_pred HHHHHHHHhCCccCcccceEeCCCCHHHHHcCCee
Confidence 999765 5899999999999999999953
No 26
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=99.82 E-value=2.4e-20 Score=160.64 Aligned_cols=103 Identities=13% Similarity=0.106 Sum_probs=94.3
Q ss_pred ccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHH
Q 027245 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFS 148 (226)
Q Consensus 69 ~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~ 148 (226)
+.+|+.+|+|++.|.+| +++|+++.+++++||+|+++.|||+|..|+++|++++++|++.|++||+|+.|+.+.+++|+
T Consensus 3 l~iG~~aPdF~l~~~~G-~v~l~d~~Gk~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~~v~vigIS~D~~~~~~~~~ 81 (233)
T 2v2g_A 3 ITLGEVFPNFEADSTIG-KLKFHDWLGNSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRGVKLIALSCDNVADHKEWS 81 (233)
T ss_dssp CCTTCBCCCCEEEETTC-CEEHHHHHCSSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHH
T ss_pred CCCCCCCCCcEEecCCC-CEEHHHHCCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHHHHH
Confidence 56899999999999999 99999975433677777779999999999999999999999999999999999999899999
Q ss_pred H------Hc--CCceeEEecCChHHHHHcCCc
Q 027245 149 E------QT--KFKGEVYADPNHSSYEALSFV 172 (226)
Q Consensus 149 ~------~~--~~pfpll~Dp~~~ly~alGv~ 172 (226)
+ +. +++||+++|+++++.++||+.
T Consensus 82 ~~i~~~~~~~~~~~fpil~D~~~~va~~ygv~ 113 (233)
T 2v2g_A 82 EDVKCLSGVKGDMPYPIIADETRELAVKLGMV 113 (233)
T ss_dssp HHHHHHHTCCSSCSSCEEECTTCHHHHHTTCE
T ss_pred HHHHHhhCcccCCceEEEECChHHHHHHhCCc
Confidence 8 57 899999999999999999995
No 27
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.82 E-value=3.3e-20 Score=156.42 Aligned_cols=109 Identities=17% Similarity=0.124 Sum_probs=100.2
Q ss_pred CccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeC--------C
Q 027245 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP--------G 139 (226)
Q Consensus 68 ~~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~--------~ 139 (226)
...+|+++|+|++.|.+|++++|+++ ++++++|++||++|||+|+.+++.|+++++++++.|+.+|+|+. +
T Consensus 31 ~l~~G~~aP~f~l~~~~G~~v~l~~~-~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d 109 (218)
T 3u5r_E 31 SITLGTRAADFVLPDAGGNLFTLAEF-KDSPALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFPEE 109 (218)
T ss_dssp CCCTTCBCCCCCEECTTCCEECGGGG-TTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCGGG
T ss_pred cCCCCCcCCCcEeECCCCCEEeHHHh-CCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccccC
Confidence 46789999999999999999999997 45667899999999999999999999999999999999999999 6
Q ss_pred CHHHHHHHHHHcCCceeEEecCChHHHHHcCCccccce
Q 027245 140 SVEQARTFSEQTKFKGEVYADPNHSSYEALSFVSGVLV 177 (226)
Q Consensus 140 ~~~~i~~f~~~~~~pfpll~Dp~~~ly~alGv~~~~~~ 177 (226)
+.+.+++|+++++++|+++.|++..+.+.||+...+..
T Consensus 110 ~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~v~~~P~~ 147 (218)
T 3u5r_E 110 TLERVGAEVKAYGYGFPYLKDASQSVAKAYGAACTPDF 147 (218)
T ss_dssp SHHHHHHHHHHHTCCSCEEECTTCHHHHHHTCCEESEE
T ss_pred CHHHHHHHHHHhCCCccEEECCccHHHHHcCCCCCCeE
Confidence 78899999999999999999999999999999765433
No 28
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=99.82 E-value=2e-20 Score=159.31 Aligned_cols=103 Identities=11% Similarity=0.071 Sum_probs=94.8
Q ss_pred ccccCcCCCcEEecC--CCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHH
Q 027245 69 EDTKNLLDTVKVYDV--NGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQART 146 (226)
Q Consensus 69 ~~~g~~apdf~L~D~--~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~ 146 (226)
+.+|+.+|+|++.|. +| +++|+++.+++++||+|||+.|||.|..|+++|++++++|++.|++||+|+.|+.+.+++
T Consensus 3 l~iG~~aP~F~l~~~~~~G-~v~l~d~~Gk~~vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~vS~D~~~~~~~ 81 (220)
T 1xcc_A 3 YHLGATFPNFTAKASGIDG-DFELYKYIENSWAILFSHPNDFTPVCTTELAELGKMHEDFLKLNCKLIGFSCNSKESHDK 81 (220)
T ss_dssp CCTTCBCCCCEECBTTCSS-CEEHHHHTTTSEEEEECCSCTTCHHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHH
T ss_pred CCCCCCCCCcEeecccCCC-cEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHH
Confidence 568999999999999 99 999999743337899999999999999999999999999999999999999999988888
Q ss_pred HHH-------HcCCceeEEecCChHHHHHcCCc
Q 027245 147 FSE-------QTKFKGEVYADPNHSSYEALSFV 172 (226)
Q Consensus 147 f~~-------~~~~pfpll~Dp~~~ly~alGv~ 172 (226)
|.+ +.+++||+++|+++++.++||+.
T Consensus 82 ~~~~i~~~~~~~~~~fpil~D~~~~va~~ygv~ 114 (220)
T 1xcc_A 82 WIEDIKYYGKLNKWEIPIVCDESRELANKLKIM 114 (220)
T ss_dssp HHHHHHHHHTCSCCCCCEEECTTSHHHHHHTCE
T ss_pred HHHHHHHHhcCCCCcceeEECchhHHHHHhCCC
Confidence 887 57899999999999999999995
No 29
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=99.82 E-value=3.7e-20 Score=156.33 Aligned_cols=106 Identities=11% Similarity=0.083 Sum_probs=96.6
Q ss_pred CCccccCcCCCcEEecC--CC--CeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHH
Q 027245 67 VSEDTKNLLDTVKVYDV--NG--NAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (226)
Q Consensus 67 ~~~~~g~~apdf~L~D~--~G--~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~ 142 (226)
....+|+++|+|++.|. +| ++++|+++++++++||.|+++.|||+|+.+++.|++.+++|++.|++||+|+.|+.+
T Consensus 19 ~~l~~G~~aP~f~l~~~~~~G~~~~v~l~d~~~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~ 98 (213)
T 2i81_A 19 SPTYVGKEAPFFKAEAVFGDNSFGEVNLTQFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVDSKY 98 (213)
T ss_dssp -CCCBTSBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHH
T ss_pred ccccCCCcCCCeEeeccccCCceeEEeHHHHcCCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHH
Confidence 34678999999999998 89 899999975677666666669999999999999999999999999999999999999
Q ss_pred HHHHHHHHc-------CCceeEEecCChHHHHHcCCc
Q 027245 143 QARTFSEQT-------KFKGEVYADPNHSSYEALSFV 172 (226)
Q Consensus 143 ~i~~f~~~~-------~~pfpll~Dp~~~ly~alGv~ 172 (226)
.+++|+++. +++||++.|+++.+.++||+.
T Consensus 99 ~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~ 135 (213)
T 2i81_A 99 THLAWKKTPLAKGGIGNIKHTLLSDITKSISKDYNVL 135 (213)
T ss_dssp HHHHHHSSCGGGTCCCSCSSEEEECTTSHHHHHTTCE
T ss_pred HHHHHHHHHHhhCCccCCCceEEECCchHHHHHhCCc
Confidence 999999988 899999999999999999997
No 30
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.82 E-value=1.1e-19 Score=140.62 Aligned_cols=106 Identities=14% Similarity=0.097 Sum_probs=95.7
Q ss_pred cccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHH---hHHHHHHcCCEEEEEeCC-CHHHHH
Q 027245 70 DTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAA---KKDVMDASGVALVLIGPG-SVEQAR 145 (226)
Q Consensus 70 ~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~---~~~~l~~~Gv~lVaIs~~-~~~~i~ 145 (226)
.+|+.+|+|++.|.+|++++++++ .++++|++||+.|||+|+.+++.|.+ .++++++.|+.+|+|+.+ +.+.++
T Consensus 2 ~~G~~~p~f~l~~~~g~~~~l~~~--~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~~~~~~ 79 (142)
T 3ewl_A 2 NAGMKAADFTYVTVHGDNSRMSRL--KAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDENREEWA 79 (142)
T ss_dssp CTTSBCCCCEEECTTCCEEEGGGC--CCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSCHHHHH
T ss_pred CCCCcCCCCEEECCCCCEEEhhhc--CCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCCHHHHH
Confidence 579999999999999999999997 44678888899999999999999999 899999999999999998 567899
Q ss_pred HHHHHcCCceeEEecCChHHHH--HcCCccccce
Q 027245 146 TFSEQTKFKGEVYADPNHSSYE--ALSFVSGVLV 177 (226)
Q Consensus 146 ~f~~~~~~pfpll~Dp~~~ly~--alGv~~~~~~ 177 (226)
+|.++++++|+++.|+++.+.. .||+...+..
T Consensus 80 ~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~~P~~ 113 (142)
T 3ewl_A 80 TKAVYMPQGWIVGWNKAGDIRTRQLYDIRATPTI 113 (142)
T ss_dssp HHHTTSCTTCEEEECTTCHHHHTTCSCCCSSSEE
T ss_pred HHHHHcCCCcceeeCCccchhhHHHcCCCCCCeE
Confidence 9999999999999999999987 8998765544
No 31
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=99.82 E-value=1.7e-20 Score=156.95 Aligned_cols=103 Identities=6% Similarity=0.055 Sum_probs=95.4
Q ss_pred CccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHH
Q 027245 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTF 147 (226)
Q Consensus 68 ~~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f 147 (226)
...+|+.+|+|++.|.+|++++|+++ +++++||.|+++.|||+|+.+++.|++.++++ .|++||+|+.|+++.+++|
T Consensus 51 ~l~~G~~aPdf~l~d~~G~~v~L~d~-~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~--~~v~vv~Is~D~~~~~~~~ 127 (200)
T 3zrd_A 51 LPQIGDKAKDFTLVAKDLSDVALSSF-AGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL--ENTVVLCISSDLPFAQSRF 127 (200)
T ss_dssp CCCTTCBCCCCEEECTTSCEEEGGGG-TTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS--TTEEEEEEESSCHHHHTTC
T ss_pred cCCCCCCCCCeEEECCCCCEEcHHHh-CCCcEEEEEECCCCCchhHHHHHHHHHHHHHh--CCCEEEEEECCCHHHHHHH
Confidence 36789999999999999999999997 56677777777899999999999999999999 7999999999999999999
Q ss_pred HHHcCC-ceeEEecC-ChHHHHHcCCcc
Q 027245 148 SEQTKF-KGEVYADP-NHSSYEALSFVS 173 (226)
Q Consensus 148 ~~~~~~-pfpll~Dp-~~~ly~alGv~~ 173 (226)
++++++ +|++++|+ ++.+.++||+..
T Consensus 128 ~~~~~~~~f~~l~D~~~~~~~~~ygv~~ 155 (200)
T 3zrd_A 128 CGAEGLSNVITLSTLRGADFKQAYGVAI 155 (200)
T ss_dssp TTTTTCTTEEEEETTSCTHHHHHTTCEE
T ss_pred HHHcCCCCceEEecCchHHHHHHhCcee
Confidence 999999 99999999 999999999974
No 32
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=99.81 E-value=4.6e-20 Score=151.64 Aligned_cols=103 Identities=14% Similarity=0.122 Sum_probs=94.5
Q ss_pred cccCcCCCcEEecC--CC--CeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHH
Q 027245 70 DTKNLLDTVKVYDV--NG--NAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQAR 145 (226)
Q Consensus 70 ~~g~~apdf~L~D~--~G--~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~ 145 (226)
++|+.+|+|++.|. +| ++++|+++++++++||.|+++.|||+|+.+++.|++.++++++.|+++|+|+.|+.+.++
T Consensus 1 ~~G~~aP~f~l~~~~~~G~~~~~~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~ 80 (192)
T 2h01_A 1 AFQGQAPSFKAEAVFGDNTFGEVSLSDFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVDSKFTHL 80 (192)
T ss_dssp CCSSBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHH
T ss_pred CCCCcCCCcEeEeeecCCceeEEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeCCHHHHH
Confidence 36899999999998 99 999999985666666655559999999999999999999999999999999999999999
Q ss_pred HHHHHc-------CCceeEEecCChHHHHHcCCc
Q 027245 146 TFSEQT-------KFKGEVYADPNHSSYEALSFV 172 (226)
Q Consensus 146 ~f~~~~-------~~pfpll~Dp~~~ly~alGv~ 172 (226)
+|++++ +++|+++.|+++.+.++||+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~ 114 (192)
T 2h01_A 81 AWKKTPLSQGGIGNIKHTLISDISKSIARSYDVL 114 (192)
T ss_dssp HHHTSCGGGTCCCSCSSEEEECTTSHHHHHTTCE
T ss_pred HHHHhHHhhCCccCCCcCeEECCcHHHHHHhCCc
Confidence 999988 899999999999999999997
No 33
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.81 E-value=5e-20 Score=155.28 Aligned_cols=105 Identities=9% Similarity=-0.010 Sum_probs=92.4
Q ss_pred CCccccCcCCCcEEecC---CCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHH
Q 027245 67 VSEDTKNLLDTVKVYDV---NGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ 143 (226)
Q Consensus 67 ~~~~~g~~apdf~L~D~---~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~ 143 (226)
....+|+.+|+|++.|. +|++++|+++ +++++||.|++++|||+|+.|++.|++++++|++.|++||+|+.|+.+.
T Consensus 17 ~~~~~G~~aP~f~l~~~~~~~g~~v~l~d~-~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D~~~~ 95 (211)
T 2pn8_A 17 NLYFQSMPAPYWEGTAVIDGEFKELKLTDY-RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFT 95 (211)
T ss_dssp --CCSSCBCCCCEEEEEETTEEEEEEGGGG-TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHH
T ss_pred ccCCCCCcCCCeEeecccCCCCcEEEHHHh-CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHH
Confidence 34678999999999974 5689999997 4555555554599999999999999999999999999999999999999
Q ss_pred HHHHHHHc-------CCceeEEecCChHHHHHcCCc
Q 027245 144 ARTFSEQT-------KFKGEVYADPNHSSYEALSFV 172 (226)
Q Consensus 144 i~~f~~~~-------~~pfpll~Dp~~~ly~alGv~ 172 (226)
+++|+++. +++||++.|+++++.++||+.
T Consensus 96 ~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~ 131 (211)
T 2pn8_A 96 HLAWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVY 131 (211)
T ss_dssp HHHHHTSCGGGTCCCSCSSCEEECTTSHHHHHTTCE
T ss_pred HHHHHHHhhhccCccCCceEEEECCchHHHHHcCCc
Confidence 99999988 789999999999999999994
No 34
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.81 E-value=1e-19 Score=150.07 Aligned_cols=105 Identities=10% Similarity=0.046 Sum_probs=95.3
Q ss_pred CCccccCcCCCcEEecCC-------------C--CeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCC
Q 027245 67 VSEDTKNLLDTVKVYDVN-------------G--NAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGV 131 (226)
Q Consensus 67 ~~~~~g~~apdf~L~D~~-------------G--~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv 131 (226)
+.+.+|+.+|+|++.|.+ | ++++|+++ +++++||.|++++|||+|+.+++.|.+.++++.+.|+
T Consensus 2 ~~l~~G~~~P~f~l~~~~~~~~~~~~~~~~~G~~~~v~l~~~-~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v 80 (195)
T 2bmx_A 2 PLLTIGDQFPAYQLTALIGGDLSKVDAKQPGDYFTTITSDEH-PGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDA 80 (195)
T ss_dssp CBCCTTCBCCCCEEEEECSSCGGGSCCSSGGGGEEEEETTSS-TTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTE
T ss_pred CcCCCCCcCCCcCcccccccccccccccccCCCccEeeHHHh-CCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCC
Confidence 457889999999999988 7 89999997 4555555555599999999999999999999998999
Q ss_pred EEEEEeCCCHHHHHHHHHHc----CCceeEEecCChHHHHHcCCc
Q 027245 132 ALVLIGPGSVEQARTFSEQT----KFKGEVYADPNHSSYEALSFV 172 (226)
Q Consensus 132 ~lVaIs~~~~~~i~~f~~~~----~~pfpll~Dp~~~ly~alGv~ 172 (226)
++|+|+.++.+.+++|++++ +++|+++.|++..+++.||+.
T Consensus 81 ~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 125 (195)
T 2bmx_A 81 QILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAAGVL 125 (195)
T ss_dssp EEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHHTCB
T ss_pred EEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHHHHhCCc
Confidence 99999999999999999998 899999999999999999997
No 35
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=99.81 E-value=1.3e-19 Score=148.24 Aligned_cols=102 Identities=11% Similarity=0.178 Sum_probs=93.7
Q ss_pred cccCcCCCcEEecCCCC----eEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHH
Q 027245 70 DTKNLLDTVKVYDVNGN----AIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQAR 145 (226)
Q Consensus 70 ~~g~~apdf~L~D~~G~----~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~ 145 (226)
.+|+.+|+|++.|.+|+ +++|+++ +++++||.|+|++|||+|+.+++.|++.++++++.|+++|+|+.|+.+.++
T Consensus 2 ~~G~~~P~f~l~~~~g~~~~~~~~l~~~-~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~ 80 (187)
T 1we0_A 2 LIGTEVQPFRAQAFQSGKDFFEVTEADL-KGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDTHFVHK 80 (187)
T ss_dssp CTTCBCCCCEEEEECSSSCCEEEETTTT-SSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHH
T ss_pred CCCCcCCCeEEeccCCCccceEecHHHH-CCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHH
Confidence 57999999999999999 9999997 455555555559999999999999999999999999999999999999999
Q ss_pred HHHHHc----CCceeEEecCChHHHHHcCCc
Q 027245 146 TFSEQT----KFKGEVYADPNHSSYEALSFV 172 (226)
Q Consensus 146 ~f~~~~----~~pfpll~Dp~~~ly~alGv~ 172 (226)
+|++++ +++|+++.|++..+.+.||+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 111 (187)
T 1we0_A 81 AWHENSPAVGSIEYIMIGDPSQTISRQFDVL 111 (187)
T ss_dssp HHHHSCHHHHTCCSEEEECTTCHHHHHTTCE
T ss_pred HHHHHhccccCCCceEEECCchHHHHHhCCC
Confidence 999998 899999999999999999997
No 36
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=99.81 E-value=1.2e-19 Score=149.88 Aligned_cols=103 Identities=12% Similarity=0.080 Sum_probs=94.6
Q ss_pred cccCcCCCcEEecC--CCC---eEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHH
Q 027245 70 DTKNLLDTVKVYDV--NGN---AIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQA 144 (226)
Q Consensus 70 ~~g~~apdf~L~D~--~G~---~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i 144 (226)
.+|+.+|+|++.|. +|+ +++|+++++++++||.|++++|||+|+.+++.|++.++++.+.|+++|+|+.|+.+.+
T Consensus 2 ~~G~~~P~f~l~~~~~~G~~~~~v~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~ 81 (198)
T 1zof_A 2 VVTKLAPDFKAPAVLGNNEVDEHFELSKNLGKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSEQVH 81 (198)
T ss_dssp CTTSBCCCCEEEEECTTSCEEEEEETTTSCCSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESSCHHHH
T ss_pred CCCCcCCceEeecccCCCcccceEEHHHHhCCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHH
Confidence 57999999999998 899 9999997566665555555999999999999999999999999999999999999999
Q ss_pred HHHHHH-------cCCceeEEecCChHHHHHcCCc
Q 027245 145 RTFSEQ-------TKFKGEVYADPNHSSYEALSFV 172 (226)
Q Consensus 145 ~~f~~~-------~~~pfpll~Dp~~~ly~alGv~ 172 (226)
++|+++ ++++|+++.|++..+.++||+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 116 (198)
T 1zof_A 82 FAWKNTPVEKGGIGQVSFPMVADITKSISRDYDVL 116 (198)
T ss_dssp HHHHTSCGGGTCCCCCSSCEEECTTSHHHHHTTCE
T ss_pred HHHHHhhhhcccccCceeEEEECCchHHHHHhCCc
Confidence 999999 8999999999999999999997
No 37
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=99.80 E-value=1.2e-19 Score=156.34 Aligned_cols=105 Identities=10% Similarity=0.020 Sum_probs=93.5
Q ss_pred CCccccCcCCCcEEe---cCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHH
Q 027245 67 VSEDTKNLLDTVKVY---DVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ 143 (226)
Q Consensus 67 ~~~~~g~~apdf~L~---D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~ 143 (226)
....+|+++|+|++. |.+|++++|+++ +++++||+|++..|||+|+.+++.|++.+++|++.|++||+|+.|+.+.
T Consensus 46 ~~l~vG~~aPdF~l~~~~d~~G~~vsLsd~-~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D~~~~ 124 (240)
T 3qpm_A 46 SKAKISKPAPQWEGTAVINGEFKELKLSDY-RGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVDSQFT 124 (240)
T ss_dssp CSCCTTSBCCCCEEEEEETTEEEEEEGGGG-TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHH
T ss_pred CcCCCCCCCCCcEeeeeeCCCCcEEEHHHh-CCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHH
Confidence 446889999999977 445779999997 5666666665569999999999999999999999999999999999999
Q ss_pred HHHHHHHc-------CCceeEEecCChHHHHHcCCc
Q 027245 144 ARTFSEQT-------KFKGEVYADPNHSSYEALSFV 172 (226)
Q Consensus 144 i~~f~~~~-------~~pfpll~Dp~~~ly~alGv~ 172 (226)
.++|+++. +++||+++|+++++.++||+.
T Consensus 125 ~~~~~~~~~~~~~~~~~~fp~l~D~~~~v~~~ygv~ 160 (240)
T 3qpm_A 125 HLAWIITPRKQGGLGPMKIPLLSDLTHQISKDYGVY 160 (240)
T ss_dssp HHHHHHSCGGGTCCCSCSSCEEECTTSHHHHHTTCE
T ss_pred HHHHHHHHHhhcCCCCCceeEEeCchHHHHHHhCCc
Confidence 99999987 899999999999999999996
No 38
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=99.80 E-value=7.8e-20 Score=159.20 Aligned_cols=107 Identities=8% Similarity=0.017 Sum_probs=96.2
Q ss_pred CCCCccccCcCCCcEEe---cCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCH
Q 027245 65 PSVSEDTKNLLDTVKVY---DVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (226)
Q Consensus 65 ~~~~~~~g~~apdf~L~---D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~ 141 (226)
......+|+++|+|++. |.+|++++|+++ +++++||+|+++.|||+|..|++.|++++++|++.|++||+|+.|+.
T Consensus 58 ~~~~l~vG~~aPdF~l~~l~d~~G~~vsLsd~-kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~gv~vv~IS~D~~ 136 (254)
T 3tjj_A 58 HLSKAKISKPAPYWEGTAVIDGEFKELKLTDY-RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQ 136 (254)
T ss_dssp -CCCCCTTSBCCCCEEEEEETTEEEEEEGGGG-TTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTTEEEEEEESSCH
T ss_pred cccccCCCCCCCCcEeeeecCCCCcEEeHHHH-CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEcCCCH
Confidence 44567799999999976 557899999997 56677777777999999999999999999999999999999999999
Q ss_pred HHHHHHHHHc-------CCceeEEecCChHHHHHcCCc
Q 027245 142 EQARTFSEQT-------KFKGEVYADPNHSSYEALSFV 172 (226)
Q Consensus 142 ~~i~~f~~~~-------~~pfpll~Dp~~~ly~alGv~ 172 (226)
+.+++|+++. +++||+++|+++.+.++||+.
T Consensus 137 ~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~va~~ygv~ 174 (254)
T 3tjj_A 137 FTHLAWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVY 174 (254)
T ss_dssp HHHHHHHTSCGGGTSCCSCSSCEEECTTSHHHHHHTCE
T ss_pred HHHHHHHHHHHHhcCCcccccceeeCcHHHHHHHcCCc
Confidence 9999999887 899999999999999999995
No 39
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=99.80 E-value=1.9e-19 Score=148.71 Aligned_cols=104 Identities=13% Similarity=0.102 Sum_probs=94.0
Q ss_pred CccccCcCCCcEEecC-CC--CeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHH
Q 027245 68 SEDTKNLLDTVKVYDV-NG--NAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQA 144 (226)
Q Consensus 68 ~~~~g~~apdf~L~D~-~G--~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i 144 (226)
...+|+++|+|++.|. +| ++++|+++ +++++||.|+++.||++|..+++.|++.++++++.|+++|+|+.|+.+.+
T Consensus 4 ~l~~G~~aP~f~l~~~~~g~~~~v~l~~~-~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~ 82 (197)
T 1qmv_A 4 NARIGKPAPDFKATAVVDGAFKEVKLSDY-KGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTH 82 (197)
T ss_dssp TBCTTSBCCCCEEEEEETTEEEEEEGGGG-TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHH
T ss_pred cccCCCCCCCeEeEeecCCCccEEEHHHH-CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHH
Confidence 4678999999999998 88 99999997 55555555555999999999999999999999999999999999999999
Q ss_pred HHHHHHc-------CCceeEEecCChHHHHHcCCc
Q 027245 145 RTFSEQT-------KFKGEVYADPNHSSYEALSFV 172 (226)
Q Consensus 145 ~~f~~~~-------~~pfpll~Dp~~~ly~alGv~ 172 (226)
++|++++ +++||++.|+++.+.++||+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~~gv~ 117 (197)
T 1qmv_A 83 LAWINTPRKEGGLGPLNIPLLADVTRRLSEDYGVL 117 (197)
T ss_dssp HHHHTSCGGGTCCCSCSSCEEECTTCHHHHHTTCE
T ss_pred HHHHHHHHhhCCCCCCceEEEECCcHHHHHHcCCc
Confidence 9999987 899999999999999999997
No 40
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=99.80 E-value=2.2e-19 Score=149.11 Aligned_cols=104 Identities=10% Similarity=0.126 Sum_probs=94.1
Q ss_pred CccccCcCCCcEEecC--CC--CeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHH
Q 027245 68 SEDTKNLLDTVKVYDV--NG--NAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ 143 (226)
Q Consensus 68 ~~~~g~~apdf~L~D~--~G--~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~ 143 (226)
...+|+.+|+|++.|. +| ++++|+++ +++++||.|+++.|||+|+.+++.|+++++++++.|+++|+|+.|+.+.
T Consensus 5 ~~~~G~~aP~f~l~~~~~~g~~~~v~l~~~-~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D~~~~ 83 (202)
T 1uul_A 5 EAEDLHPAPDFNETALMPNGTFKKVALTSY-KGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDSEYS 83 (202)
T ss_dssp CCCTTSBCCCCEEEEECTTSCEEEEEGGGG-TTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHH
T ss_pred cccCCCcCCCcEeeeeecCCCccEEEHHHh-CCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHH
Confidence 3578999999999997 78 89999997 4555555555599999999999999999999999999999999999999
Q ss_pred HHHHHHHc-------CCceeEEecCChHHHHHcCCc
Q 027245 144 ARTFSEQT-------KFKGEVYADPNHSSYEALSFV 172 (226)
Q Consensus 144 i~~f~~~~-------~~pfpll~Dp~~~ly~alGv~ 172 (226)
+++|++++ +++||++.|+++.+.++||+.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~ 119 (202)
T 1uul_A 84 HLAWTSIERKRGGLGQMNIPILADKTKCIMKSYGVL 119 (202)
T ss_dssp HHHHHHSCGGGTCCCSCSSCEEECTTCHHHHHHTCE
T ss_pred HHHHHHHHHhhCCCCCCceeEEECCchHHHHHcCCc
Confidence 99999998 899999999999999999997
No 41
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.80 E-value=1.9e-19 Score=140.23 Aligned_cols=108 Identities=10% Similarity=0.005 Sum_probs=91.1
Q ss_pred CCccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCC-CHHHHH
Q 027245 67 VSEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-SVEQAR 145 (226)
Q Consensus 67 ~~~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~-~~~~i~ 145 (226)
....+|+.+|+|++ |.+|++++|+++ .++++|++||++||++|+.+++.|.+.++++.+.|+.+|+|+.+ +.+..+
T Consensus 5 ~~l~~G~~~P~f~l-~~~g~~~~l~~~--~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~ 81 (143)
T 4fo5_A 5 EGVNPGDLAPRIEF-LGNDAKASFHNQ--LGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEKESIFT 81 (143)
T ss_dssp BSSSTTSBCCCCCC------CCCSCCS--SCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHHH
T ss_pred cccCCcccCCceEE-cCCCCEEEHHHh--CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHHH
Confidence 45789999999999 999999999997 34678889999999999999999999999999889999999999 467899
Q ss_pred HHHHHcCCce-eEEecCC---hHHHHHcCCccccce
Q 027245 146 TFSEQTKFKG-EVYADPN---HSSYEALSFVSGVLV 177 (226)
Q Consensus 146 ~f~~~~~~pf-pll~Dp~---~~ly~alGv~~~~~~ 177 (226)
+|+++++++| +++.|.+ ..+.+.||+...+..
T Consensus 82 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~ 117 (143)
T 4fo5_A 82 ETVKIDKLDLSTQFHEGLGKESELYKKYDLRKGFKN 117 (143)
T ss_dssp HHHHHHTCCGGGEEECTTGGGSHHHHHTTGGGCCCE
T ss_pred HHHHHhCCCCceeeecccccchHHHHHcCCCCCCcE
Confidence 9999999999 8999985 689999998765433
No 42
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.80 E-value=5.6e-19 Score=138.92 Aligned_cols=107 Identities=20% Similarity=0.244 Sum_probs=96.2
Q ss_pred ccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCC-HHHHHHH
Q 027245 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS-VEQARTF 147 (226)
Q Consensus 69 ~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~-~~~i~~f 147 (226)
..+|+.+|+|++.|.+|+.++++++ + ++++|++||+.|||+|+++++.|.+.++++.+.|+.+++|+.++ .+..++|
T Consensus 3 l~~g~~~p~f~l~~~~G~~~~l~~~-~-gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~ 80 (152)
T 2lrn_A 3 LATGSVAPAITGIDLKGNSVSLNDF-K-GKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKA 80 (152)
T ss_dssp SCTTEECCCCEEECSSSCEEESGGG-T-TSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHH
T ss_pred ccCCCcCCCceeEcCCCCEEeHHHc-C-CCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHH
Confidence 5689999999999999999999997 3 45677777899999999999999999999998899999999985 5789999
Q ss_pred HHHcCCceeEEecC---ChHHHHHcCCccccce
Q 027245 148 SEQTKFKGEVYADP---NHSSYEALSFVSGVLV 177 (226)
Q Consensus 148 ~~~~~~pfpll~Dp---~~~ly~alGv~~~~~~ 177 (226)
.++++++|+++.|+ +..+.+.||+...+..
T Consensus 81 ~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~ 113 (152)
T 2lrn_A 81 IEEDKSYWNQVLLQKDDVKDVLESYCIVGFPHI 113 (152)
T ss_dssp HHHHTCCSEEEEECHHHHHHHHHHTTCCSSCEE
T ss_pred HHHhCCCCeEEecccchhHHHHHHhCCCcCCeE
Confidence 99999999999999 7999999999765443
No 43
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.79 E-value=1.2e-18 Score=136.03 Aligned_cols=106 Identities=15% Similarity=0.107 Sum_probs=96.2
Q ss_pred ccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCC-CHHHHHHH
Q 027245 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-SVEQARTF 147 (226)
Q Consensus 69 ~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~-~~~~i~~f 147 (226)
..+|+.+|+|++.| +|+.++++++ + ++++|++|++.|||.|+.+++.|.+.++++.+.|+.+|+|+.+ +.+.+++|
T Consensus 3 l~~G~~~P~f~l~~-~g~~~~l~~~-~-gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~ 79 (152)
T 3gl3_A 3 LDKGDKAPDFALPG-KTGVVKLSDK-T-GSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGDAMKF 79 (152)
T ss_dssp CCTTSBCCCCEEEB-SSSEEEGGGG-T-TSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHHHHHH
T ss_pred CCCCCcCCceEeeC-CCCeEeHHHh-C-CCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHHHHHH
Confidence 57899999999999 9999999997 3 4567777779999999999999999999999999999999998 56789999
Q ss_pred HHHcCCceeEEecCChHHHHHcCCccccce
Q 027245 148 SEQTKFKGEVYADPNHSSYEALSFVSGVLV 177 (226)
Q Consensus 148 ~~~~~~pfpll~Dp~~~ly~alGv~~~~~~ 177 (226)
.++++++|+++.|++..+.+.||+...+..
T Consensus 80 ~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~ 109 (152)
T 3gl3_A 80 LAQVPAEFTVAFDPKGQTPRLYGVKGMPTS 109 (152)
T ss_dssp HHHSCCCSEEEECTTCHHHHHTTCCSSSEE
T ss_pred HHHcCCCCceeECCcchhHHHcCCCCCCeE
Confidence 999999999999999999999999765543
No 44
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.79 E-value=6.7e-19 Score=136.99 Aligned_cols=108 Identities=10% Similarity=0.035 Sum_probs=95.8
Q ss_pred CccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHH---hHHHHHHcCCEEEEEeCCCH-HH
Q 027245 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAA---KKDVMDASGVALVLIGPGSV-EQ 143 (226)
Q Consensus 68 ~~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~---~~~~l~~~Gv~lVaIs~~~~-~~ 143 (226)
...+|+.+|+|++.|.+|+.++|+++ + ++++|++||+.||++|+++++.|.+ +++++++.++.+|+|+.++. +.
T Consensus 4 ~~~~G~~ap~f~l~~~~g~~~~l~~~-~-gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~~~ 81 (142)
T 3eur_A 4 KNRLGTKALNFTYTLDSGVKGTLYQF-P-AEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEELDE 81 (142)
T ss_dssp TTCTTSBCCCCEEEETTSCEEETTTC-C-CSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCHHH
T ss_pred hhcCCCccCCcEEEcCCCCEeeHHHc-C-CCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCHHH
Confidence 35789999999999999999999997 3 4678888899999999999999999 89999999999999999875 68
Q ss_pred HHHHHHHcCCceeEEecCChH--HHHHcCCccccce
Q 027245 144 ARTFSEQTKFKGEVYADPNHS--SYEALSFVSGVLV 177 (226)
Q Consensus 144 i~~f~~~~~~pfpll~Dp~~~--ly~alGv~~~~~~ 177 (226)
.++|.++++++++.+.|++.. +.+.|++...+..
T Consensus 82 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~~P~~ 117 (142)
T 3eur_A 82 WKKHRNDFAKEWTNGYDKELVIKNKNLYDLRAIPTL 117 (142)
T ss_dssp HHHHGGGSCTTSEEEECTTCHHHHTTCSCCTTCSEE
T ss_pred HHHHHHhcccccccccCccchhhhhhhcCCCcCCeE
Confidence 899999999999999999876 6788888655443
No 45
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.79 E-value=8e-19 Score=137.42 Aligned_cols=106 Identities=22% Similarity=0.255 Sum_probs=94.8
Q ss_pred cccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCC-HHHHHHHH
Q 027245 70 DTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS-VEQARTFS 148 (226)
Q Consensus 70 ~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~-~~~i~~f~ 148 (226)
++|+.+|+|++.|.+|+.++++++ ++ +++|++|++.|||+|+++++.|.+.++++.+.++.+++|+.++ .+.+++|+
T Consensus 1 ~~G~~~p~~~l~~~~g~~~~l~~~-~g-k~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~ 78 (151)
T 2f9s_A 1 SEGSDAPNFVLEDTNGKRIELSDL-KG-KGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFM 78 (151)
T ss_dssp -CCEECCCCEEECTTCCEEEGGGG-TT-SEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHH
T ss_pred CCCCcCCcceeEcCCCCEEEHHHc-CC-CEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHH
Confidence 368999999999999999999997 44 5667777799999999999999999999998999999999964 67899999
Q ss_pred HHcCCceeEEecCChHHHHHcCCccccce
Q 027245 149 EQTKFKGEVYADPNHSSYEALSFVSGVLV 177 (226)
Q Consensus 149 ~~~~~pfpll~Dp~~~ly~alGv~~~~~~ 177 (226)
++++++|+++.|++..+.+.||+...+..
T Consensus 79 ~~~~~~~~~~~d~~~~~~~~~~v~~~P~~ 107 (151)
T 2f9s_A 79 KSYGVNFPVVLDTDRQVLDAYDVSPLPTT 107 (151)
T ss_dssp HHHTCCSCEEEETTSHHHHHTTCCSSCEE
T ss_pred HHcCCCceEEECCchHHHHhcCCCCCCeE
Confidence 99999999999999999999999765543
No 46
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.79 E-value=6.3e-19 Score=143.90 Aligned_cols=107 Identities=16% Similarity=0.154 Sum_probs=97.8
Q ss_pred CccccCcCCCcEEe-cCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeC--------
Q 027245 68 SEDTKNLLDTVKVY-DVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP-------- 138 (226)
Q Consensus 68 ~~~~g~~apdf~L~-D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~-------- 138 (226)
...+|+.+|+|++. |.+|+.++|+++ ++++++|++||+.||++|+.+++.|++.++++.+.|+.+|+|+.
T Consensus 17 ~~~~g~~~p~f~l~~~~~G~~~~l~~~-~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~ 95 (196)
T 2ywi_A 17 MFPLGKQAPPFALTNVIDGNVVRLEDV-KSDAATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYPE 95 (196)
T ss_dssp CCCTTCBCCCCEEEETTTCCEEEHHHH-CCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCGG
T ss_pred CCCcCCcCCceeeeecCCCCEEeHHHh-CCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccccccc
Confidence 46789999999999 999999999997 45556888889999999999999999999999999999999998
Q ss_pred CCHHHHHHHHHHcCCceeEEecCChHHHHHcCCcccc
Q 027245 139 GSVEQARTFSEQTKFKGEVYADPNHSSYEALSFVSGV 175 (226)
Q Consensus 139 ~~~~~i~~f~~~~~~pfpll~Dp~~~ly~alGv~~~~ 175 (226)
++.+.+++|+++++++|+++.|++..+.+.||+...+
T Consensus 96 d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P 132 (196)
T 2ywi_A 96 DSPENMKKVAEELGYPFPYLYDETQEVAKAYDAACTP 132 (196)
T ss_dssp GSHHHHHHHHHHHTCCSCEEECSSCHHHHHHTCCEES
T ss_pred cCHHHHHHHHHHcCCCceEEECCchHHHHHhCCCCCC
Confidence 5788999999999999999999999999999986544
No 47
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.79 E-value=6.6e-19 Score=138.23 Aligned_cols=108 Identities=10% Similarity=-0.019 Sum_probs=97.5
Q ss_pred CccccCcCCCcEEecCCCCeEeCC--CccCCCeEEEEEecCCCChh--HHHHHHHHHHhHHHH-HHcCCEEEEEeCCCH-
Q 027245 68 SEDTKNLLDTVKVYDVNGNAIPIS--DLWKDRKAVVAFARHFGCVL--CRKRADYLAAKKDVM-DASGVALVLIGPGSV- 141 (226)
Q Consensus 68 ~~~~g~~apdf~L~D~~G~~v~Ls--dl~~~~~vVVvF~R~~~Cp~--C~~el~~L~~~~~~l-~~~Gv~lVaIs~~~~- 141 (226)
...+|+.+|+|++.|.+|++++|+ ++ .++++|++||++||++ |+.+++.|.+.++++ ++.|+.+|+|+.++.
T Consensus 4 ~l~~G~~~p~f~l~~~~g~~~~l~~~~~--~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~ 81 (150)
T 3fw2_A 4 KSEIGKYAPFFSLPNAKGEKITRSSDAF--KQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDK 81 (150)
T ss_dssp TTSTTSBCCCCCEEBTTCCEECTTSTTT--TTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCH
T ss_pred cccCCCcCCccEeECCCCCEEecchhhh--CCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCH
Confidence 467899999999999999999999 87 3467888889999999 999999999999999 888999999999965
Q ss_pred HHHHHHHHHcCCceeEEecC---ChHHHHHcCCccccce
Q 027245 142 EQARTFSEQTKFKGEVYADP---NHSSYEALSFVSGVLV 177 (226)
Q Consensus 142 ~~i~~f~~~~~~pfpll~Dp---~~~ly~alGv~~~~~~ 177 (226)
+.+++|.++++++|+++.|+ +..+.+.||+...+..
T Consensus 82 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~ 120 (150)
T 3fw2_A 82 QQWKDAIKRDTLDWEQVCDFGGLNSEVAKQYSIYKIPAN 120 (150)
T ss_dssp HHHHHHHHHTTCCSEEECCSCGGGCHHHHHTTCCSSSEE
T ss_pred HHHHHHHHHhCCCceEEEcCcccchHHHHHcCCCccCeE
Confidence 79999999999999999999 6799999999765444
No 48
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.79 E-value=1.4e-18 Score=135.90 Aligned_cols=105 Identities=16% Similarity=0.185 Sum_probs=95.6
Q ss_pred ccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCC--HHHHHH
Q 027245 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS--VEQART 146 (226)
Q Consensus 69 ~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~--~~~i~~ 146 (226)
..+|+++|+|++.|.+|+.++++++ ++ +.+|++|++.||+.|+++++.|.+.++++.+.++.+++|+.+. .+.+++
T Consensus 2 ~~~G~~~p~~~l~~~~g~~~~l~~~-~g-k~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~ 79 (154)
T 3kcm_A 2 SLEENPAPDFTLNTLNGEVVKLSDL-KG-QVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEE 79 (154)
T ss_dssp -CTTSBCCCCEEECTTSCEEEGGGG-TT-SEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHH
T ss_pred CCCCCCCCCeEEEcCCCCEEehhhc-CC-CEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHH
Confidence 3679999999999999999999997 34 5677777799999999999999999999999999999999997 678999
Q ss_pred HHHHcCCceeEEecCChHHHHHcCCcccc
Q 027245 147 FSEQTKFKGEVYADPNHSSYEALSFVSGV 175 (226)
Q Consensus 147 f~~~~~~pfpll~Dp~~~ly~alGv~~~~ 175 (226)
|+++++++|+++.|++..+.+.||+...+
T Consensus 80 ~~~~~~~~~~~~~d~~~~~~~~~~v~~~P 108 (154)
T 3kcm_A 80 FFRKTGFTLPVLLDADKRVGKLYGTTGVP 108 (154)
T ss_dssp HHHHHCCCCCEEECTTCHHHHHHTCCSBC
T ss_pred HHHHcCCCeeEEecCchHHHHHhCCCCCC
Confidence 99999999999999999999999997655
No 49
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=99.78 E-value=5.2e-19 Score=149.76 Aligned_cols=104 Identities=11% Similarity=0.054 Sum_probs=93.2
Q ss_pred CccccCcCCCcEEec---CCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHH
Q 027245 68 SEDTKNLLDTVKVYD---VNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQA 144 (226)
Q Consensus 68 ~~~~g~~apdf~L~D---~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i 144 (226)
...+|+++|+|++.+ .+|++++|+++ +++++||.|+++.|||+|+.+++.|++.+++|++.|++||+|+.|+.+.+
T Consensus 26 ~l~~G~~aP~f~l~~~~~~~g~~v~l~d~-~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~ 104 (220)
T 1zye_A 26 APAVTQHAPYFKGTAVVSGEFKEISLDDF-KGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSHFSH 104 (220)
T ss_dssp -CCTTSBCCCCEEEEECSSSEEEEEGGGG-TTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHH
T ss_pred cccCCCCCCCcEEEeeeCCCCcEEEHHHh-CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHH
Confidence 367899999999984 67899999997 45565555555999999999999999999999999999999999999999
Q ss_pred HHHHHHc-------CCceeEEecCChHHHHHcCCc
Q 027245 145 RTFSEQT-------KFKGEVYADPNHSSYEALSFV 172 (226)
Q Consensus 145 ~~f~~~~-------~~pfpll~Dp~~~ly~alGv~ 172 (226)
++|++++ +++||++.|++..+.++||+.
T Consensus 105 ~~~~~~~~~~~g~~~~~fp~l~D~~~~i~~~ygv~ 139 (220)
T 1zye_A 105 LAWINTPRKNGGLGHMNIALLSDLTKQISRDYGVL 139 (220)
T ss_dssp HHHHTSCGGGTCCCSCSSEEEECTTSHHHHHTTCE
T ss_pred HHHHHHHHHhCCCcCCceEEEECCcHHHHHHhCCe
Confidence 9999987 899999999999999999997
No 50
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=99.78 E-value=4.7e-19 Score=154.34 Aligned_cols=103 Identities=16% Similarity=0.130 Sum_probs=95.3
Q ss_pred ccccCcCCCcEEecCCCCeEeC-CCcc-CCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHH
Q 027245 69 EDTKNLLDTVKVYDVNGNAIPI-SDLW-KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQART 146 (226)
Q Consensus 69 ~~~g~~apdf~L~D~~G~~v~L-sdl~-~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~ 146 (226)
..+|+.+|+|++.+.+| .++| ++++ +++++||+|||+.|||+|..|++.|++.+++|++.|++||+|+.|+.+..++
T Consensus 5 ~~iG~~aPdF~l~~~~G-~v~l~~d~l~~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS~Ds~~~~~~ 83 (249)
T 3a2v_A 5 PLIGERFPEMEVTTDHG-VIKLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIK 83 (249)
T ss_dssp CCTTSBCCCEEEEETTE-EEEETHHHHTTTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHH
T ss_pred CCCCCCCCCeEEEcCCC-CEecHHHHhhCCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEECCCHHHHHH
Confidence 56899999999999999 8999 9975 6777899999999999999999999999999999999999999999988888
Q ss_pred HHHH------cCCceeEEecCChHHHHHcCCc
Q 027245 147 FSEQ------TKFKGEVYADPNHSSYEALSFV 172 (226)
Q Consensus 147 f~~~------~~~pfpll~Dp~~~ly~alGv~ 172 (226)
|.+. .+++||+++|+++++.+.||+.
T Consensus 84 w~~~~~~~~~~~i~fPil~D~~~~ia~~ygv~ 115 (249)
T 3a2v_A 84 WKEWIERHIGVRIPFPIIADPQGTVARRLGLL 115 (249)
T ss_dssp HHHHHHHHTCCCCCSCEEECTTSHHHHHHTCC
T ss_pred HHHHHHHhcCCCCceeEEECCchHHHHHhCCc
Confidence 8875 5899999999999999999996
No 51
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=99.78 E-value=6.4e-19 Score=149.22 Aligned_cols=103 Identities=12% Similarity=0.059 Sum_probs=92.2
Q ss_pred CccccCcCCCcEEec---CCCCeEeCCCccCCCeEEEEEec-CCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHH
Q 027245 68 SEDTKNLLDTVKVYD---VNGNAIPISDLWKDRKAVVAFAR-HFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ 143 (226)
Q Consensus 68 ~~~~g~~apdf~L~D---~~G~~v~Lsdl~~~~~vVVvF~R-~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~ 143 (226)
.+.+|+++|+|++.| .+|++++|+++ +++ ++|++|| .+||++|+.+++.|++.++++++.|++||+|+.|+.+.
T Consensus 39 ~l~~G~~aP~f~l~~~~d~~G~~v~l~~~-~Gk-~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D~~~~ 116 (222)
T 3ztl_A 39 VLLPNRPAPEFKGQAVINGEFKEICLKDY-RGK-YVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYS 116 (222)
T ss_dssp -CCSSEECCCCEEEEEETTEEEEEEGGGG-TTS-EEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHH
T ss_pred cccCCCCCCCeEEecccCCCCcEEeHHHh-CCC-eEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHH
Confidence 478899999999995 45699999997 455 5566666 59999999999999999999999999999999999989
Q ss_pred HHHHHHHc-------CCceeEEecCChHHHHHcCCc
Q 027245 144 ARTFSEQT-------KFKGEVYADPNHSSYEALSFV 172 (226)
Q Consensus 144 i~~f~~~~-------~~pfpll~Dp~~~ly~alGv~ 172 (226)
.++|+++. +++|+++.|++..+.++||+.
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~ygv~ 152 (222)
T 3ztl_A 117 HLAWDNLDRKSGGLGHMKIPLLADRKQEISKAYGVF 152 (222)
T ss_dssp HHHHHHSCGGGTSCCSCSSCEEECSSSHHHHHTTCB
T ss_pred HHHHHHHhhhhccccccceeEEeCCchHHHHHcCCe
Confidence 99999887 899999999999999999997
No 52
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.78 E-value=6.5e-19 Score=138.64 Aligned_cols=105 Identities=13% Similarity=0.124 Sum_probs=93.7
Q ss_pred ccCcCCCcEEec--CCCCeEeCCCccCCCeEEEEEecCCCChhHHHH-HHHHHHhHHHHHHcCCEEEEEeC-------CC
Q 027245 71 TKNLLDTVKVYD--VNGNAIPISDLWKDRKAVVAFARHFGCVLCRKR-ADYLAAKKDVMDASGVALVLIGP-------GS 140 (226)
Q Consensus 71 ~g~~apdf~L~D--~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~e-l~~L~~~~~~l~~~Gv~lVaIs~-------~~ 140 (226)
.|+.+|+|++.| .+|++++++++ .++++|++||++||++|+.+ ++.|++.++++.+.++.+|+|+. ++
T Consensus 2 ~g~~aP~f~l~~~~~~g~~~~l~~~--~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~ 79 (158)
T 3eyt_A 2 NAMKAPELQIQQWFNSATDLTLADL--RGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMT 79 (158)
T ss_dssp CCEECCCCCEEEEESCSSCCCTGGG--TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSC
T ss_pred CCCcCCCceehhhhcCCCccCHHHh--CCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCC
Confidence 588999999999 48999999997 34678888889999999997 99999999999988999999995 57
Q ss_pred HHHHHHHHHHcCCceeEEecCCh-----HHHHHcCCccccce
Q 027245 141 VEQARTFSEQTKFKGEVYADPNH-----SSYEALSFVSGVLV 177 (226)
Q Consensus 141 ~~~i~~f~~~~~~pfpll~Dp~~-----~ly~alGv~~~~~~ 177 (226)
.+.+++|+++++++||++.|++. .+.+.||+...+..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~~P~~ 121 (158)
T 3eyt_A 80 PISLKAFLHEYRIKFPVGVDQPGDGAMPRTMAAYQMRGTPSL 121 (158)
T ss_dssp HHHHHHHHHHTTCCSCEEEECCCSSSSCHHHHHTTCCSSSEE
T ss_pred HHHHHHHHHHcCCCceEEEcCccchhhHHHHHHcCCCCCCEE
Confidence 89999999999999999999998 79999998665433
No 53
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.78 E-value=1.2e-18 Score=138.17 Aligned_cols=111 Identities=9% Similarity=0.054 Sum_probs=98.4
Q ss_pred CCCCCCCccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCH
Q 027245 62 ESPPSVSEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (226)
Q Consensus 62 ~~~~~~~~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~ 141 (226)
.........+|+.+|+|++.|.+|+.++++++ ++ +.+|++||+.||+.|+.+++.|.+.++++.+.++.+|+|+.++
T Consensus 8 ~~~~~~~~~~G~~~p~f~l~~~~g~~~~l~~~-~g-k~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~- 84 (158)
T 3hdc_A 8 AESDAPLVRTGALAPNFKLPTLSGENKSLAQY-RG-KIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEK- 84 (158)
T ss_dssp CCCCSCCCCTTSBCCCCEEECTTSCEEESGGG-TT-SEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSS-
T ss_pred cccCCcccCCCCcCCCceeEcCCCCEEehHHh-CC-CEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCH-
Confidence 33455567899999999999999999999997 34 5677777799999999999999999999998899999999998
Q ss_pred HHHHHHHHHcCCceeEEecCChHHHHHcCCccccc
Q 027245 142 EQARTFSEQTKFKGEVYADPNHSSYEALSFVSGVL 176 (226)
Q Consensus 142 ~~i~~f~~~~~~pfpll~Dp~~~ly~alGv~~~~~ 176 (226)
.+++|.++.+++|+++.|++..+.+.||+...+.
T Consensus 85 -~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~ 118 (158)
T 3hdc_A 85 -RFPEKYRRAPVSFNFLSDATGQVQQRYGANRLPD 118 (158)
T ss_dssp -SCCGGGGGCCCSCEEEECTTSHHHHHTTCCSSSE
T ss_pred -HHHHHHHHcCCCceEEECchHHHHHHhCCCCcce
Confidence 5788999999999999999999999999976554
No 54
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.78 E-value=1.2e-18 Score=141.79 Aligned_cols=105 Identities=15% Similarity=0.121 Sum_probs=95.5
Q ss_pred CccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeC--------C
Q 027245 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP--------G 139 (226)
Q Consensus 68 ~~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~--------~ 139 (226)
...+|+.+|+|++.|.+|+.++|+++ ++ +++|++|++.||++|+.+++.|+++++++.+. +.+|+|+. +
T Consensus 6 ~~~~g~~~p~f~l~~~~G~~~~l~~~-~g-k~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~-~~~v~v~~d~~~~~~~d 82 (188)
T 2cvb_A 6 ELPLESPLIDAELPDPRGGRYRLSQF-HE-PLLAVVFMCNHCPYVKGSIGELVALAERYRGK-VAFVGINANDYEKYPED 82 (188)
T ss_dssp CCCTTCBCCCCEEECTTSCEEEGGGC-CS-SEEEEEEECSSCHHHHTTHHHHHHHHHHTTTT-EEEEEEECCCTTTCGGG
T ss_pred cCCCCCCCCCceeecCCCCEEeHHHh-CC-CEEEEEEECCCCccHHHHHHHHHHHHHHhhcC-eEEEEEEcCcccccccc
Confidence 46789999999999999999999997 34 67777788999999999999999999999887 99999998 5
Q ss_pred CHHHHHHHHHHcCCceeEEecCChHHHHHcCCcccc
Q 027245 140 SVEQARTFSEQTKFKGEVYADPNHSSYEALSFVSGV 175 (226)
Q Consensus 140 ~~~~i~~f~~~~~~pfpll~Dp~~~ly~alGv~~~~ 175 (226)
+.+.+++|+++++++|+++.|++..+.+.||+...+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P 118 (188)
T 2cvb_A 83 APEKMAAFAEEHGIFFPYLLDETQEVAKAYRALRTP 118 (188)
T ss_dssp SHHHHHHHHHHHTCCSCEEECSSSHHHHHTTCCEES
T ss_pred CHHHHHHHHHHhCCCceEEECCcchHHHHcCCCCCC
Confidence 778999999999999999999999999999987544
No 55
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=99.77 E-value=9.8e-19 Score=150.44 Aligned_cols=100 Identities=5% Similarity=0.010 Sum_probs=91.5
Q ss_pred CccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEecCCCChhHH-----HHHHHHHHhHHHHHHcCCEEEEEeCCCHH
Q 027245 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCR-----KRADYLAAKKDVMDASGVALVLIGPGSVE 142 (226)
Q Consensus 68 ~~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~-----~el~~L~~~~~~l~~~Gv~lVaIs~~~~~ 142 (226)
.+.+|+++|+|+|.|.+|++++|+++ +++++||+||+..|||+|. .|++.|++. + .|+.||+|+.|+++
T Consensus 21 ~l~vG~~APdFtL~d~~G~~vsLsd~-~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~--~gv~VvgIS~Ds~~ 94 (224)
T 3keb_A 21 FPRKGDYLPSFMLVDDQKHDAALESF-SHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---W--PHLKLIVITVDSPS 94 (224)
T ss_dssp CCCTTCBCCCCEEEETTSCEEEGGGG-TTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---C--TTSEEEEEESSCHH
T ss_pred cCCCCCCCCCeEEECCCCCEEeHHHh-CCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---c--CCCEEEEEECCCHH
Confidence 36789999999999999999999995 6778888888888899999 999999988 4 79999999999999
Q ss_pred HHHHHHHHcCC-ceeEEecC-ChHHHHHcCCcc
Q 027245 143 QARTFSEQTKF-KGEVYADP-NHSSYEALSFVS 173 (226)
Q Consensus 143 ~i~~f~~~~~~-pfpll~Dp-~~~ly~alGv~~ 173 (226)
.+++|++++++ +|++++|+ ++.+.++||+..
T Consensus 95 ~~~~f~~~~gl~~fplLsD~~~~~vak~yGv~~ 127 (224)
T 3keb_A 95 SLARARHEHGLPNIALLSTLRGRDFHKRYGVLI 127 (224)
T ss_dssp HHHHHHHHHCCTTCEEEESTTCTTHHHHTTCBC
T ss_pred HHHHHHHHcCCCCceEEEcCCchHHHHHhCCcc
Confidence 99999999999 69999999 799999999974
No 56
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=99.77 E-value=7.2e-19 Score=143.08 Aligned_cols=97 Identities=10% Similarity=0.131 Sum_probs=84.3
Q ss_pred CCCCCCCccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeC---
Q 027245 62 ESPPSVSEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP--- 138 (226)
Q Consensus 62 ~~~~~~~~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~--- 138 (226)
++........|+.+|+|++.|.+|++++++++ .+++||++||++|||+|+.+++.|++.++++.+.|+.||+|+.
T Consensus 5 ~~~~~~~~~~~~~~p~f~l~d~~G~~v~l~~~--~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~ 82 (180)
T 3kij_A 5 HHHMKFLKPKINSFYAFEVKDAKGRTVSLEKY--KGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQF 82 (180)
T ss_dssp -----CCCCCCCCGGGCEEEBTTSCEEEGGGG--TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCCS
T ss_pred hhhhhhhcCCcCcccceEEecCCCCEecHHHc--CCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEEECCcc
Confidence 33445557789999999999999999999997 4468999999999999999999999999999999999999995
Q ss_pred -----CCHHHHHHHHHH-cCCceeEEec
Q 027245 139 -----GSVEQARTFSEQ-TKFKGEVYAD 160 (226)
Q Consensus 139 -----~~~~~i~~f~~~-~~~pfpll~D 160 (226)
++.+.+++|+++ ++++||++.|
T Consensus 83 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 110 (180)
T 3kij_A 83 GESEPRPSKEVESFARKNYGVTFPIFHK 110 (180)
T ss_dssp TTCCCSCHHHHHHHHHHHHCCCSCBBCC
T ss_pred ccCCCCCHHHHHHHHHHhcCCCCceeee
Confidence 477899999999 9999999764
No 57
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.77 E-value=2.1e-18 Score=139.78 Aligned_cols=101 Identities=21% Similarity=0.305 Sum_probs=92.5
Q ss_pred CccccCcCCCcEEecC--CCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCC------EEEEEeCC
Q 027245 68 SEDTKNLLDTVKVYDV--NGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGV------ALVLIGPG 139 (226)
Q Consensus 68 ~~~~g~~apdf~L~D~--~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv------~lVaIs~~ 139 (226)
....|+.+|+|++.|. +|++++|+++ .++++|++||+.|||+|+.+++.|++.++++.+.|+ .+|+|+.+
T Consensus 30 ~~~~g~~~p~f~l~~~~~~g~~~~l~~~--~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d 107 (183)
T 3lwa_A 30 DEADRQQLPDIGGDSLMEEGTQINLSDF--ENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVR 107 (183)
T ss_dssp CGGGCCCCCCCEEEBSSSTTCEEEGGGG--TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECS
T ss_pred ccccCCCCCceeccccccCCcEecHHHh--CCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECC
Confidence 3578999999999999 9999999997 346777888899999999999999999999999999 99999998
Q ss_pred C--HHHHHHHHHHcCCceeEEecCChHHHHHcC
Q 027245 140 S--VEQARTFSEQTKFKGEVYADPNHSSYEALS 170 (226)
Q Consensus 140 ~--~~~i~~f~~~~~~pfpll~Dp~~~ly~alG 170 (226)
+ .+.+++|+++++++|+++.|++..+.+.||
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 140 (183)
T 3lwa_A 108 DYSRDIAQDFVTDNGLDYPSIYDPPFMTAASLG 140 (183)
T ss_dssp CCCHHHHHHHHHHTTCCSCEEECTTCGGGGGTT
T ss_pred CCCHHHHHHHHHHcCCCccEEECCcchHHHHhc
Confidence 7 789999999999999999999999999987
No 58
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.77 E-value=2.7e-18 Score=134.20 Aligned_cols=106 Identities=11% Similarity=0.131 Sum_probs=94.8
Q ss_pred cccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEe--CCCHHHHHHH
Q 027245 70 DTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG--PGSVEQARTF 147 (226)
Q Consensus 70 ~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs--~~~~~~i~~f 147 (226)
.+|+.+|+|++.|.+|+.++++++ ++ +++|++|++.|||.|+++++.|++.++++.+.++.+++|+ .++.+.+++|
T Consensus 3 ~~G~~~p~~~l~~~~g~~~~l~~~-~g-k~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~ 80 (153)
T 2l5o_A 3 LDSKTAPAFSLPDLHGKTVSNADL-QG-KVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQY 80 (153)
T ss_dssp -CCTTCCSCEEECTTSCEEEHHHH-TT-CEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHH
T ss_pred CCCCCCCCcEeecCCCCCccHHHh-CC-CEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHH
Confidence 569999999999999999999997 44 5667777899999999999999999999999999999999 4677899999
Q ss_pred HHHcCCceeEEecCChHHHHHcCCccccce
Q 027245 148 SEQTKFKGEVYADPNHSSYEALSFVSGVLV 177 (226)
Q Consensus 148 ~~~~~~pfpll~Dp~~~ly~alGv~~~~~~ 177 (226)
+++++++|+++.|++..+.+.||+...+..
T Consensus 81 ~~~~~~~~~~~~d~~~~~~~~~~i~~~P~~ 110 (153)
T 2l5o_A 81 VKDYGLPFTVMYDADKAVGQAFGTQVYPTS 110 (153)
T ss_dssp HHHTTCCSEEEECSSCHHHHHHTCCSSSEE
T ss_pred HHHcCCCceEEcCchHHHHHHcCCCccCeE
Confidence 999999999999999999999999765544
No 59
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.77 E-value=6.4e-19 Score=136.22 Aligned_cols=109 Identities=13% Similarity=0.036 Sum_probs=98.2
Q ss_pred CccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCC-CHHHHHH
Q 027245 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-SVEQART 146 (226)
Q Consensus 68 ~~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~-~~~~i~~ 146 (226)
...+|+.+|+|++.|.+|+.++++++ .++++|++||+.||++|+.+++.|.+.++++.+.|+.+++|+.+ +.+.+++
T Consensus 4 ~~~~G~~~p~~~l~~~~g~~~~l~~~--~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~ 81 (148)
T 3hcz_A 4 PLLLGKKAPNLYMTDTTGTYRYLYDV--QAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERKDEEWLK 81 (148)
T ss_dssp CCCTTSBCCCCCCBCTTSCBCCGGGC--CCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSSSHHHHH
T ss_pred ccCCCCcCCceEEecCCCCEEEhHHc--CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCCHHHHHH
Confidence 36789999999999999999999997 44577888889999999999999999999999999999999998 5689999
Q ss_pred HHHHcCCc-eeEEecCChH--HHHHcCCcccccee
Q 027245 147 FSEQTKFK-GEVYADPNHS--SYEALSFVSGVLVT 178 (226)
Q Consensus 147 f~~~~~~p-fpll~Dp~~~--ly~alGv~~~~~~t 178 (226)
|.++++++ |+++.|++.. +.+.||+...+...
T Consensus 82 ~~~~~~~~~~~~~~d~~~~~~~~~~~~i~~~P~~~ 116 (148)
T 3hcz_A 82 FIRSKKIGGWLNVRDSKNHTDFKITYDIYATPVLY 116 (148)
T ss_dssp HHHHHTCTTSEEEECTTCCCCHHHHHCCCSSCEEE
T ss_pred HHHHcCCCCceEEeccccchhHHHhcCcCCCCEEE
Confidence 99999999 9999999998 99999997655443
No 60
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=99.77 E-value=5.2e-19 Score=141.42 Aligned_cols=102 Identities=12% Similarity=0.081 Sum_probs=93.0
Q ss_pred CccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEecCCC-ChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHH
Q 027245 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFG-CVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQART 146 (226)
Q Consensus 68 ~~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~-Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~ 146 (226)
...+|+.+|+|++.|.+|++++++++ +++ ++|++||++| ||+|+.+++.|++.++++ .++++|+|+.|+++.+++
T Consensus 17 ~~~~G~~~p~f~l~~~~G~~~~l~~~-~gk-~~vl~F~~~~~C~~C~~~~~~l~~l~~~~--~~~~vv~is~d~~~~~~~ 92 (167)
T 2jsy_A 17 EVKVGDQAPDFTVLTNSLEEKSLADM-KGK-VTIISVIPSIDTGVCDAQTRRFNEEAAKL--GDVNVYTISADLPFAQAR 92 (167)
T ss_dssp CCCTTSCCCCCEEEBTTCCEEEHHHH-TTS-CEEEEECSCSTTSHHHHTHHHHHHHHHHH--SSCEEEEEECSSGGGTSC
T ss_pred ccCCCCcCCceEEECCCCCEeeHHHh-CCC-eEEEEEecCCCCCchHHHHHHHHHHHHHc--CCCEEEEEECCCHHHHHH
Confidence 36789999999999999999999997 444 5677777777 999999999999999999 799999999999988999
Q ss_pred HHHHcCC-ceeEEec-CChHHHHHcCCcc
Q 027245 147 FSEQTKF-KGEVYAD-PNHSSYEALSFVS 173 (226)
Q Consensus 147 f~~~~~~-pfpll~D-p~~~ly~alGv~~ 173 (226)
|++++++ +||++.| +++.+.+.||+..
T Consensus 93 ~~~~~~~~~~~~~~d~~~~~~~~~~~v~~ 121 (167)
T 2jsy_A 93 WCGANGIDKVETLSDHRDMSFGEAFGVYI 121 (167)
T ss_dssp CGGGSSCTTEEEEEGGGTCHHHHHTTCBB
T ss_pred HHHhcCCCCceEeeCCchhHHHHHhCCcc
Confidence 9999999 9999999 9999999999975
No 61
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.77 E-value=8.8e-19 Score=137.92 Aligned_cols=105 Identities=18% Similarity=0.184 Sum_probs=95.5
Q ss_pred ccCcCCCcEEec-CCCCeEeCCCccCCCeEEEEEecCCCChhHHHH-HHHHHHhHHHHHHcCCEEEEEeC-------CCH
Q 027245 71 TKNLLDTVKVYD-VNGNAIPISDLWKDRKAVVAFARHFGCVLCRKR-ADYLAAKKDVMDASGVALVLIGP-------GSV 141 (226)
Q Consensus 71 ~g~~apdf~L~D-~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~e-l~~L~~~~~~l~~~Gv~lVaIs~-------~~~ 141 (226)
.|+++|+|++.| .+|+.++++++ .++++|++||++||++|+.+ ++.|++.++++.+.|+.+|+|+. ++.
T Consensus 5 ~g~~~p~~~~~~~~~g~~~~l~~~--~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~ 82 (160)
T 3lor_A 5 DNAPLLELDVQEWVNHEGLSNEDL--RGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTP 82 (160)
T ss_dssp TTCCBCCCCEEEESSSCCCCHHHH--TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCH
T ss_pred CCCcCCCcccccccCCCccCHHHh--CCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCCH
Confidence 689999999999 89999999997 35678888899999999996 99999999999999999999997 688
Q ss_pred HHHHHHHHHcCCceeEEecCChH------HHHHcCCccccce
Q 027245 142 EQARTFSEQTKFKGEVYADPNHS------SYEALSFVSGVLV 177 (226)
Q Consensus 142 ~~i~~f~~~~~~pfpll~Dp~~~------ly~alGv~~~~~~ 177 (226)
+.+++|+++++++|+++.|++.. +.+.||+...+..
T Consensus 83 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~v~~~P~~ 124 (160)
T 3lor_A 83 EALKVFIDEFGIKFPVAVDMPREGQRIPSTMKKYRLEGTPSI 124 (160)
T ss_dssp HHHHHHHHHTTCCSCEEEECCCTTCSSCHHHHHTTCCSSSEE
T ss_pred HHHHHHHHHcCCCCcEEECCccccchhhhHHHhcccCccceE
Confidence 99999999999999999999998 9999999765543
No 62
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=99.77 E-value=2e-18 Score=140.63 Aligned_cols=103 Identities=10% Similarity=0.114 Sum_probs=89.6
Q ss_pred CCCCccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCC-----
Q 027245 65 PSVSEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG----- 139 (226)
Q Consensus 65 ~~~~~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~----- 139 (226)
+.....+|+.+|+|++.|.+|++++++++ .++++|++||++|||+|+++++.|++.++++.+.|+++|+|+.+
T Consensus 17 ~~~~~~~g~~~p~f~l~~~~G~~~~l~~~--~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~ 94 (183)
T 2obi_A 17 SRDDWRCARSMHEFSAKDIDGHMVNLDKY--RGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQ 94 (183)
T ss_dssp --CCGGGCCSGGGCEEEBTTSCEEEGGGG--TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTC
T ss_pred cccCCcccCcccceEEEcCCCCEeeHHHc--CCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECCCCCCC
Confidence 45567899999999999999999999997 34678888899999999999999999999999999999999975
Q ss_pred ---CHHHHHHHHHHcCCceeEEe--cCChH----HHHHc
Q 027245 140 ---SVEQARTFSEQTKFKGEVYA--DPNHS----SYEAL 169 (226)
Q Consensus 140 ---~~~~i~~f~~~~~~pfpll~--Dp~~~----ly~al 169 (226)
+.+.+++|+++++++||++. |.++. +|+.+
T Consensus 95 e~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~l 133 (183)
T 2obi_A 95 EPGSNEEIKEFAAGYNVKFDMFSKICVNGDDAHPLWKWM 133 (183)
T ss_dssp CCSCHHHHHHHHHTTTCCSEEBCCCCCSSTTSCHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCCceEEeeeccCCcchhHHHHHh
Confidence 57899999999999999997 76654 56554
No 63
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=99.77 E-value=8.8e-19 Score=142.38 Aligned_cols=101 Identities=8% Similarity=0.014 Sum_probs=86.4
Q ss_pred ccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEecCCC-ChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHH
Q 027245 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFG-CVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTF 147 (226)
Q Consensus 69 ~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~-Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f 147 (226)
..+|+.+|+|++.|.+|++++++++ +++ ++|++||++| |++|+.+++.|++.+++ .++++|+|+.|+++.+++|
T Consensus 18 l~~G~~~P~f~l~~~~G~~v~l~~~-~gk-~vvl~F~~t~~C~~C~~~~~~l~~l~~~---~~v~vv~Is~D~~~~~~~~ 92 (175)
T 1xvq_A 18 PAVGSPAPAFTLTGGDLGVISSDQF-RGK-SVLLNIFPSVDTPVCATSVRTFDERAAA---SGATVLCVSKDLPFAQKRF 92 (175)
T ss_dssp CCTTSBCCCCEEECTTSCEEEGGGG-TTS-CEEEEECSCCCSSCCCHHHHHHHHHHHH---TTCEEEEEESSCHHHHTTC
T ss_pred CCcCCcCCCeEEECCCCCEEeHHHc-CCC-EEEEEEEeCCCCchHHHHHHHHHHHHhh---cCCEEEEEECCCHHHHHHH
Confidence 5789999999999999999999997 454 5666667776 99999999999999987 7899999999999999999
Q ss_pred HHHcCC-ceeEEecCChHHHHHcCCccc
Q 027245 148 SEQTKF-KGEVYADPNHSSYEALSFVSG 174 (226)
Q Consensus 148 ~~~~~~-pfpll~Dp~~~ly~alGv~~~ 174 (226)
++++++ +|+++.|++..++++||+...
T Consensus 93 ~~~~~~~~~~~l~D~~~~~~~~~gv~~~ 120 (175)
T 1xvq_A 93 CGAEGTENVMPASAFRDSFGEDYGVTIA 120 (175)
T ss_dssp C------CEEEEECTTSSHHHHTTCBBC
T ss_pred HHHcCCCCceEeeCCHHHHHHHhCCccc
Confidence 999999 899999999999999999643
No 64
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.77 E-value=4.2e-18 Score=135.01 Aligned_cols=105 Identities=14% Similarity=0.112 Sum_probs=90.9
Q ss_pred ccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCH-HHHHHH
Q 027245 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV-EQARTF 147 (226)
Q Consensus 69 ~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~-~~i~~f 147 (226)
...|+.+|+|++.|.+|++++|+++ ++ +++|++||++|||+|+.+++.|.+.++++.+.|+.+|+|+.++. +..++|
T Consensus 9 ~~~g~~~p~f~l~~~~G~~~~l~~~-~g-k~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~~~~~~~ 86 (152)
T 2lrt_A 9 KIKEASIIDIQLKDLKGNTRSLTDL-KG-KVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGDEHFWKTS 86 (152)
T ss_dssp SSCTTCSCCCCEEBTTSCEECTTTG-GG-SEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCCHHHHHHH
T ss_pred hccCCCCCCeEEEcCCCCEEeHHHh-CC-CEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHH
Confidence 4678999999999999999999997 34 56777778899999999999999999999999999999999875 467777
Q ss_pred HHHcCCceeEEecCChH---HHHHcCCccccce
Q 027245 148 SEQTKFKGEVYADPNHS---SYEALSFVSGVLV 177 (226)
Q Consensus 148 ~~~~~~pfpll~Dp~~~---ly~alGv~~~~~~ 177 (226)
.+. ++|+++.|+++. +.+.||+...+..
T Consensus 87 ~~~--~~~~~~~d~~~~~~~~~~~~~v~~~P~~ 117 (152)
T 2lrt_A 87 ADN--LPWVCVRDANGAYSSYISLYNVTNLPSV 117 (152)
T ss_dssp HTT--CSSEEEECSSGGGCHHHHHHTCCSCSEE
T ss_pred HhC--CCceEEECCCCcchHHHHHcCcccCceE
Confidence 754 889999999997 9999998765443
No 65
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=99.77 E-value=1.3e-18 Score=138.96 Aligned_cols=102 Identities=12% Similarity=0.228 Sum_probs=91.9
Q ss_pred CccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEecCCCCh-hHHHHHHHHHHhHHHHHHcC--CEEEEEeCC----C
Q 027245 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCV-LCRKRADYLAAKKDVMDASG--VALVLIGPG----S 140 (226)
Q Consensus 68 ~~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp-~C~~el~~L~~~~~~l~~~G--v~lVaIs~~----~ 140 (226)
...+|+.+|+|++.|.+|+.++|+++ ++ +++|++||++||+ +|+.+++.|.+.++++++.| +++|+|+.| +
T Consensus 6 ~l~~g~~~p~f~l~~~~G~~~~l~~~-~g-k~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~ 83 (174)
T 1xzo_A 6 KDPLNYEVEPFTFQNQDGKNVSLESL-KG-EVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDK 83 (174)
T ss_dssp CSCCCEECCCCEEECTTSCEEETGGG-TT-CCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCC
T ss_pred cCccccccCCcEEEcCCCCEEehhhc-CC-CEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCC
Confidence 46789999999999999999999997 44 5678888899999 99999999999999999887 999999996 6
Q ss_pred HHHHHHHHHHcCCce---eEEecCChHHHHHcCC
Q 027245 141 VEQARTFSEQTKFKG---EVYADPNHSSYEALSF 171 (226)
Q Consensus 141 ~~~i~~f~~~~~~pf---pll~Dp~~~ly~alGv 171 (226)
++.+++|+++++++| +++.|++..+.+.|++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~l~d~~~~~~~~~~~ 117 (174)
T 1xzo_A 84 PKQLKKFAANYPLSFDNWDFLTGYSQSEIEEFAL 117 (174)
T ss_dssp HHHHHHHHTTSCCCGGGEEEEBCSCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCcceEEEeCCCHHHHHHHHH
Confidence 789999999999999 9999999988877753
No 66
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.76 E-value=2.8e-18 Score=132.61 Aligned_cols=109 Identities=8% Similarity=-0.023 Sum_probs=96.8
Q ss_pred CccccCcCCCcEEecCCCCeEeCC--CccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHH-HHcCCEEEEEeCCC-HHH
Q 027245 68 SEDTKNLLDTVKVYDVNGNAIPIS--DLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVM-DASGVALVLIGPGS-VEQ 143 (226)
Q Consensus 68 ~~~~g~~apdf~L~D~~G~~v~Ls--dl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l-~~~Gv~lVaIs~~~-~~~ 143 (226)
...+|+.+|+|++.|.+|+.++++ ++ .++++|++||+.||++|+.+++.|.+.++++ .+.|+.+++|+.+. .+.
T Consensus 4 ~~~~g~~~p~~~l~~~~g~~~~l~~~~~--~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~ 81 (148)
T 3fkf_A 4 KVTVGKSAPYFSLPNEKGEKLSRSAERF--RNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREA 81 (148)
T ss_dssp -CCTTSBCCCCCEEBTTSCEECTTSTTT--TTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHH
T ss_pred cccCCCcCCCeEeeCCCCCEEecccccc--CCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHH
Confidence 468899999999999999999999 87 3456777778999999999999999999999 88899999999985 568
Q ss_pred HHHHHHHcCCceeEEecC---ChHHHHHcCCcccccee
Q 027245 144 ARTFSEQTKFKGEVYADP---NHSSYEALSFVSGVLVT 178 (226)
Q Consensus 144 i~~f~~~~~~pfpll~Dp---~~~ly~alGv~~~~~~t 178 (226)
+++|.++++++|+++.|+ +..+.+.||+...+...
T Consensus 82 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~ 119 (148)
T 3fkf_A 82 WETAIKKDTLSWDQVCDFTGLSSETAKQYAILTLPTNI 119 (148)
T ss_dssp HHHHHHHTTCCSEEECCSCGGGCHHHHHTTCCSSSEEE
T ss_pred HHHHHHHcCCCceEEEccCCcchHHHHhcCCCCcCEEE
Confidence 999999999999999999 77999999997665543
No 67
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=99.76 E-value=2.9e-18 Score=140.25 Aligned_cols=101 Identities=10% Similarity=0.089 Sum_probs=88.3
Q ss_pred CCccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCC-------
Q 027245 67 VSEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG------- 139 (226)
Q Consensus 67 ~~~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~------- 139 (226)
....+|+.+|+|++.|.+|++++++++ .++++|++||++|||+|+++++.|++.++++++.|+++|+|+.+
T Consensus 21 ~~~~~g~~~p~f~l~~~~G~~v~l~~~--~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d~~~~~~~ 98 (185)
T 2gs3_A 21 QSMRCARSMHEFSAKDIDGHMVNLDKY--RGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEP 98 (185)
T ss_dssp GGGGGCCCGGGCEEEBTTSCEEEGGGG--TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCC
T ss_pred hhccCCCCcCCceeEcCCCCEeeHHHc--CCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEEECcccCCCCC
Confidence 446789999999999999999999997 34678889999999999999999999999999999999999875
Q ss_pred -CHHHHHHHHHHcCCceeEEe--cCCh----HHHHHc
Q 027245 140 -SVEQARTFSEQTKFKGEVYA--DPNH----SSYEAL 169 (226)
Q Consensus 140 -~~~~i~~f~~~~~~pfpll~--Dp~~----~ly~al 169 (226)
+.+.+++|+++++++||++. |.++ .+|+.+
T Consensus 99 ~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~l 135 (185)
T 2gs3_A 99 GSNEEIKEFAAGYNVKFDMFSKICVNGDDAHPLWKWM 135 (185)
T ss_dssp SCHHHHHHHHHHTTCCSEEBCCCBSSSTTBCHHHHHH
T ss_pred CCHHHHHHHHHHcCCCCeeeeeeccCChhhhHHHHHH
Confidence 46789999999999999997 5554 366655
No 68
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=99.76 E-value=2.3e-18 Score=154.74 Aligned_cols=95 Identities=18% Similarity=0.235 Sum_probs=87.1
Q ss_pred CcCCCcEEecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcC
Q 027245 73 NLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTK 152 (226)
Q Consensus 73 ~~apdf~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~ 152 (226)
.++|+|+|.|.+|++++|+|+ +++++||.||++.|||.|..|+++|++. ...|++||+||.|+++.+++|+++++
T Consensus 2 ak~p~F~l~~~~G~~~~Lsd~-~Gk~vvl~F~p~~~tp~C~~e~~~~~~~----~~~~~~v~gis~D~~~~~~~f~~~~~ 76 (322)
T 4eo3_A 2 ARVKHFELLTDEGKTFTHVDL-YGKYTILFFFPKAGTSGSTREAVEFSRE----NFEKAQVVGISRDSVEALKRFKEKND 76 (322)
T ss_dssp CBCCCCEEEETTSCEEEGGGT-TTSEEEEEECSSTTSHHHHHHHHHHHHS----CCTTEEEEEEESCCHHHHHHHHHHHT
T ss_pred CCCCCcEEECCCcCEEeHHHh-CCCeEEEEEECCCCCCCCHHHHHHHHHH----hhCCCEEEEEeCCCHHHHHHHHHhhC
Confidence 579999999999999999997 5778888888899999999999998753 23589999999999999999999999
Q ss_pred CceeEEecCChHHHHHcCCc
Q 027245 153 FKGEVYADPNHSSYEALSFV 172 (226)
Q Consensus 153 ~pfpll~Dp~~~ly~alGv~ 172 (226)
++||+++|+++++.++||+.
T Consensus 77 l~fp~l~D~~~~v~~~ygv~ 96 (322)
T 4eo3_A 77 LKVTLLSDPEGILHEFFNVL 96 (322)
T ss_dssp CCSEEEECTTCHHHHHTTCE
T ss_pred CceEEEEcCchHHHHhcCCC
Confidence 99999999999999999984
No 69
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.76 E-value=5.5e-18 Score=130.20 Aligned_cols=108 Identities=14% Similarity=0.175 Sum_probs=92.8
Q ss_pred CCccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCC----CHH
Q 027245 67 VSEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG----SVE 142 (226)
Q Consensus 67 ~~~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~----~~~ 142 (226)
....+|+.+|+|++.|.+|+.+++++ +++ .+|++|++.||++|+.+++.|.+.++++.+.++.++.|+.+ +.+
T Consensus 7 ~~~~~g~~~p~~~l~~~~g~~~~l~~--~gk-~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~ 83 (145)
T 3erw_A 7 AEEKQPAVPAVFLMKTIEGEDISIPN--KGQ-KTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQ 83 (145)
T ss_dssp -----CCSCCEEEEECTTSCEEEESC--TTS-EEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCHH
T ss_pred ccccCCCcCCCceeecCCCCEEeHHH--CCC-EEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCHH
Confidence 34678999999999999999999998 455 55566669999999999999999999998789999999985 678
Q ss_pred HHHHHHHHcCCceeEEecCChHHHHHcCCccccce
Q 027245 143 QARTFSEQTKFKGEVYADPNHSSYEALSFVSGVLV 177 (226)
Q Consensus 143 ~i~~f~~~~~~pfpll~Dp~~~ly~alGv~~~~~~ 177 (226)
.+++|.++++++|+++.|++..+.+.||+...+..
T Consensus 84 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~ 118 (145)
T 3erw_A 84 VVEDFIKANKLTFPIVLDSKGELMKEYHIITIPTS 118 (145)
T ss_dssp HHHHHHHHTTCCSCEEECSSSHHHHHTTCCEESEE
T ss_pred HHHHHHHHcCCceeEEEcCchhHHHhcCcCccCeE
Confidence 99999999999999999999999999999765544
No 70
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.76 E-value=3.4e-18 Score=138.68 Aligned_cols=103 Identities=18% Similarity=0.298 Sum_probs=93.5
Q ss_pred CccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCH--HHHH
Q 027245 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV--EQAR 145 (226)
Q Consensus 68 ~~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~--~~i~ 145 (226)
...+|+.+|+|++.|.+|++++++++ .++++|++||+.||++|+.+++.|++.++++.+.++.+|+|+.+.. +.++
T Consensus 33 ~~~~g~~~p~f~l~~~~G~~~~l~~~--~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~ 110 (186)
T 1jfu_A 33 MASAPLKLPDLAFEDADGKPKKLSDF--RGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPK 110 (186)
T ss_dssp ECCSCCBCCCCEEECTTSCEEEGGGG--TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTHHH
T ss_pred cccCCCcCCCcEeEcCCCCEeeHHHc--CCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHHHH
Confidence 45779999999999999999999997 3456777888999999999999999999999888999999999864 7889
Q ss_pred HHHHHcCC-ceeEEecCChHHHHHcCCc
Q 027245 146 TFSEQTKF-KGEVYADPNHSSYEALSFV 172 (226)
Q Consensus 146 ~f~~~~~~-pfpll~Dp~~~ly~alGv~ 172 (226)
+|++++++ .|+++.|++..+++.||+.
T Consensus 111 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 138 (186)
T 1jfu_A 111 TFLKEANLTRLGYFNDQKAKVFQDLKAI 138 (186)
T ss_dssp HHHHHTTCCTTCCEECTTCHHHHHHHTT
T ss_pred HHHHHcCCCCCceEECCcchHHHHhccc
Confidence 99999999 4999999999999999985
No 71
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=99.75 E-value=2.5e-18 Score=140.24 Aligned_cols=93 Identities=8% Similarity=0.111 Sum_probs=79.6
Q ss_pred CCCccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCC------
Q 027245 66 SVSEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG------ 139 (226)
Q Consensus 66 ~~~~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~------ 139 (226)
....++|+.+|+|++.|.+|++++++++ .++++|++||++|||+|+++++.|+++++++++.|+++|+|+.+
T Consensus 20 ~~~~~~g~~~p~f~l~~~~G~~~~l~~~--~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~~~~~e 97 (181)
T 2p31_A 20 FQSMQQEQDFYDFKAVNIRGKLVSLEKY--RGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQE 97 (181)
T ss_dssp -------CCGGGCEEEBTTSCEEEGGGG--TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCC
T ss_pred cCcCCcCCccCceEeecCCCCEecHHHc--CCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECcCCCCCC
Confidence 3446889999999999999999999997 44688888999999999999999999999999999999999985
Q ss_pred --CHHHHHHHHHH-cCCceeEEec
Q 027245 140 --SVEQARTFSEQ-TKFKGEVYAD 160 (226)
Q Consensus 140 --~~~~i~~f~~~-~~~pfpll~D 160 (226)
+.+.+++|+++ ++++||++.|
T Consensus 98 ~~~~~~~~~~~~~~~~~~~p~~~~ 121 (181)
T 2p31_A 98 PDSNKEIESFARRTYSVSFPMFSK 121 (181)
T ss_dssp CSCHHHHHHHHHHHHCCCSCBBCC
T ss_pred CCCHHHHHHHHHhhcCCCceeEee
Confidence 57899999999 9999999964
No 72
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.75 E-value=1.2e-17 Score=131.66 Aligned_cols=99 Identities=14% Similarity=0.175 Sum_probs=89.5
Q ss_pred CccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCC-HHHHHH
Q 027245 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS-VEQART 146 (226)
Q Consensus 68 ~~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~-~~~i~~ 146 (226)
+..+|+.+|+|++.|.+|+.++++++ ++ +++|++||+.|||.|+++++.|.+.++++.+.|+.+|+|+.++ .+.+++
T Consensus 7 ~~~~g~~~p~~~l~~~~g~~~~l~~~-~g-k~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~~~~~~ 84 (165)
T 3or5_A 7 ADARPTPAPSFSGVTVDGKPFSSASL-KG-KAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLPNVKN 84 (165)
T ss_dssp CCCCCCBCCCCEEECTTSCEEEGGGG-TT-CEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCHHHHHH
T ss_pred hhcCCCCCCCceeeCCCCCEechhHc-CC-CEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHH
Confidence 35789999999999999999999997 44 5667777799999999999999999999999999999999987 678999
Q ss_pred HHHHcCCceeEEecCChHHHHHc
Q 027245 147 FSEQTKFKGEVYADPNHSSYEAL 169 (226)
Q Consensus 147 f~~~~~~pfpll~Dp~~~ly~al 169 (226)
|.++++++|+++.|.+ .+.+.|
T Consensus 85 ~~~~~~~~~~~~~~~~-~~~~~~ 106 (165)
T 3or5_A 85 YMKTQGIIYPVMMATP-ELIRAF 106 (165)
T ss_dssp HHHHHTCCSCEEECCH-HHHHHH
T ss_pred HHHHcCCCCceEecCH-HHHHHH
Confidence 9999999999999976 888888
No 73
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=99.75 E-value=4.3e-18 Score=135.08 Aligned_cols=94 Identities=14% Similarity=0.210 Sum_probs=82.7
Q ss_pred ccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCC--------C
Q 027245 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG--------S 140 (226)
Q Consensus 69 ~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~--------~ 140 (226)
.++|+.+|+|++.|.+|++++++++ .++++|++||++|||+|+.+++.|++.++++.+.|+++|+|+.+ +
T Consensus 5 ~~~g~~~p~f~l~~~~G~~~~l~~~--~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~ 82 (169)
T 2v1m_A 5 HKSWNSIYEFTVKDINGVDVSLEKY--RGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAFPCNQFGGQEPWA 82 (169)
T ss_dssp --CCCSGGGCEEEBTTSCEEEGGGG--TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSC
T ss_pred ccCCcccccceeecCCCCCccHHHc--CCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEEECCccCCCCCCC
Confidence 5689999999999999999999997 34678888889999999999999999999999999999999975 4
Q ss_pred HHHHHHH-HHHcCCceeEEe--cCChH
Q 027245 141 VEQARTF-SEQTKFKGEVYA--DPNHS 164 (226)
Q Consensus 141 ~~~i~~f-~~~~~~pfpll~--Dp~~~ 164 (226)
.+.+++| .++++++||++. |.++.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~d~~~~ 109 (169)
T 2v1m_A 83 EAEIKKFVTEKYGVQFDMFSKIKVNGS 109 (169)
T ss_dssp HHHHHHHHHHHHCCCSEEBCCCCCSST
T ss_pred HHHHHHHHHHhcCCCCceEEEEeecCc
Confidence 6889999 599999999996 76654
No 74
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.74 E-value=1.6e-17 Score=135.02 Aligned_cols=105 Identities=15% Similarity=0.074 Sum_probs=92.1
Q ss_pred CCCCccccCcCCCcEEecCCC--CeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeC-CCH
Q 027245 65 PSVSEDTKNLLDTVKVYDVNG--NAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP-GSV 141 (226)
Q Consensus 65 ~~~~~~~g~~apdf~L~D~~G--~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~-~~~ 141 (226)
+.+...+|+.+|+|++.|.+| +.++++++ + ++++|++||+.|||+|+++++.|++++++ |+.+|+|+. ++.
T Consensus 26 ~~~~~~~G~~~P~f~l~~~~g~~~~~~l~~~-~-gk~vll~F~a~~C~~C~~~~~~l~~l~~~----~v~vv~vs~~d~~ 99 (176)
T 3kh7_A 26 ELPSALIGKPFPAFDLPSVQDPARRLTEADL-K-GKPALVNVWGTWCPSCRVEHPELTRLAEQ----GVVIYGINYKDDN 99 (176)
T ss_dssp GSTTTTTTSBCCCCEEEBSSCTTSEEEGGGG-C-SSCEEEEEECTTCHHHHHHHHHHHHHHHT----TCEEEEEEESCCH
T ss_pred cccccccCCcCCCcEecccCCCCceecHHHh-C-CCEEEEEEECCcCHHHHHHHHHHHHHHHC----CCEEEEEeCCCCH
Confidence 344578899999999999999 89999997 3 45677777899999999999999998775 899999995 667
Q ss_pred HHHHHHHHHcCCcee-EEecCChHHHHHcCCcccc
Q 027245 142 EQARTFSEQTKFKGE-VYADPNHSSYEALSFVSGV 175 (226)
Q Consensus 142 ~~i~~f~~~~~~pfp-ll~Dp~~~ly~alGv~~~~ 175 (226)
+.+++|+++++++|+ ++.|++..+.+.||+...+
T Consensus 100 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P 134 (176)
T 3kh7_A 100 AAAIKWLNELHNPYLLSISDADGTLGLDLGVYGAP 134 (176)
T ss_dssp HHHHHHHHHTTCCCSEEEEETTCHHHHHHTCCSSC
T ss_pred HHHHHHHHHcCCCCceEEECCcchHHHHcCCCCCC
Confidence 899999999999998 6999999999999997655
No 75
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=99.74 E-value=4.4e-18 Score=135.17 Aligned_cols=94 Identities=13% Similarity=0.159 Sum_probs=81.4
Q ss_pred ccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCC--------C
Q 027245 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG--------S 140 (226)
Q Consensus 69 ~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~--------~ 140 (226)
..+|+.+|+|++.|.+|++++++++ .++++|++||++|||+|+.+++.|++.++++++.|+.+|+|+.+ +
T Consensus 6 ~~~g~~~p~f~l~~~~g~~~~l~~~--~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~ 83 (170)
T 2p5q_A 6 SKNPESVHDFTVKDAKENDVDLSIF--KGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEEPGT 83 (170)
T ss_dssp ----CCGGGCEEEBTTSCEEEGGGG--TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSC
T ss_pred CCCCccccceEEEcCCCCEecHHHh--CCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEECCCCCCCCCCC
Confidence 4679999999999999999999997 34677888889999999999999999999999999999999984 5
Q ss_pred HHHHHHHHH-HcCCceeEE--ecCChH
Q 027245 141 VEQARTFSE-QTKFKGEVY--ADPNHS 164 (226)
Q Consensus 141 ~~~i~~f~~-~~~~pfpll--~Dp~~~ 164 (226)
.+.+++|++ +++++||++ .|+++.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~d~~~~ 110 (170)
T 2p5q_A 84 NDQITDFVCTRFKSEFPIFDKIDVNGE 110 (170)
T ss_dssp HHHHHHHHHHHTCCCSCBBCCCBSSST
T ss_pred HHHHHHHHHHhcCCCceeEeeeccCCC
Confidence 788999999 789999999 687754
No 76
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=99.73 E-value=7.3e-18 Score=134.12 Aligned_cols=101 Identities=11% Similarity=0.111 Sum_probs=90.9
Q ss_pred ccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEecCCCChh-HHHHHHHHHHhHHHHHHc---CCEEEEEeCC----C
Q 027245 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVL-CRKRADYLAAKKDVMDAS---GVALVLIGPG----S 140 (226)
Q Consensus 69 ~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~-C~~el~~L~~~~~~l~~~---Gv~lVaIs~~----~ 140 (226)
..+|+.+|+|++.|.+| .++++++ .++++|++||++||++ |+.+++.|++.++++.+. ++.+|+|+.| +
T Consensus 10 ~~~G~~~p~f~l~~~~g-~~~l~~~--~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~ 86 (172)
T 2k6v_A 10 RLLNPKPVDFALEGPQG-PVRLSQF--QDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDP 86 (172)
T ss_dssp EEEEEEECCCEEECSSS-EEEGGGS--TTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCC
T ss_pred cccCCCCCCeEEEcCCC-CCcHHHh--CCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCC
Confidence 45789999999999999 9999997 4467888999999996 999999999999999876 7999999965 5
Q ss_pred HHHHHHHHHHcCCceeEEecCC---hHHHHHcCCc
Q 027245 141 VEQARTFSEQTKFKGEVYADPN---HSSYEALSFV 172 (226)
Q Consensus 141 ~~~i~~f~~~~~~pfpll~Dp~---~~ly~alGv~ 172 (226)
++.+++|+++++++|+++.|++ ..+.++||+.
T Consensus 87 ~~~~~~~~~~~~~~~~~l~d~~~~~~~~~~~~gv~ 121 (172)
T 2k6v_A 87 PEVADRYAKAFHPSFLGLSGSPEAVREAAQTFGVF 121 (172)
T ss_dssp HHHHHHHHHHHCTTEEEECCCHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHhCCCcEEEeCCHHHHHHHHHhcCeE
Confidence 7899999999999999999998 6889999975
No 77
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.73 E-value=2.6e-17 Score=129.92 Aligned_cols=100 Identities=11% Similarity=0.080 Sum_probs=88.3
Q ss_pred cCCCcEEecCCCCeEeCCCccCCCeEEEEEecCCCChh-HHHHHHHHHHhHHHHHH----cCCEEEEEeCCC----HHHH
Q 027245 74 LLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVL-CRKRADYLAAKKDVMDA----SGVALVLIGPGS----VEQA 144 (226)
Q Consensus 74 ~apdf~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~-C~~el~~L~~~~~~l~~----~Gv~lVaIs~~~----~~~i 144 (226)
.+|+|++.|.+|++++++++ .++++|++||++|||. |+.+++.|++.++++++ .++++|+|+.|. ++.+
T Consensus 2 ~ap~f~l~~~~G~~~~l~~~--~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~ 79 (164)
T 2ggt_A 2 LGGPFSLTTHTGERKTDKDY--LGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAI 79 (164)
T ss_dssp CCCCCEEEETTSCEEEGGGG--TTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHH
T ss_pred CCCCeEEEeCCCCEEeHHHc--CCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHH
Confidence 57999999999999999997 3467888889999997 99999999999999987 499999999875 6889
Q ss_pred HHHHHHcCCceeEEe---cCChHHHHHcCCcccc
Q 027245 145 RTFSEQTKFKGEVYA---DPNHSSYEALSFVSGV 175 (226)
Q Consensus 145 ~~f~~~~~~pfpll~---Dp~~~ly~alGv~~~~ 175 (226)
++|+++++++|+++. |+...+.++||+...+
T Consensus 80 ~~~~~~~~~~~~~l~~~~d~~~~~~~~~~v~~~p 113 (164)
T 2ggt_A 80 ANYVKEFSPKLVGLTGTREEVDQVARAYRVYYSP 113 (164)
T ss_dssp HHHHHTTCSSCEEEECCHHHHHHHHHTTTCCEEE
T ss_pred HHHHHHcCCCeEEEeCCHHHHHHHHHhcCeEEEe
Confidence 999999999999984 6677899999986543
No 78
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=99.73 E-value=7.8e-18 Score=141.67 Aligned_cols=90 Identities=6% Similarity=-0.021 Sum_probs=80.9
Q ss_pred ccCcCCCcEEecCC-CCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCC--------CH
Q 027245 71 TKNLLDTVKVYDVN-GNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG--------SV 141 (226)
Q Consensus 71 ~g~~apdf~L~D~~-G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~--------~~ 141 (226)
.++.+|+|++.|.+ |++++|+++ .+++||++||++|||+|+++++.|+++++++++.|+.||+|+.+ +.
T Consensus 22 ~~~~~p~f~l~~~~~G~~v~l~~~--~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d~~~~~e~d~~ 99 (208)
T 2f8a_A 22 SMQSVYAFSARPLAGGEPVSLGSL--RGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQENAKN 99 (208)
T ss_dssp CCCCGGGCEECBTTCSSCEEGGGG--TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTTTCSCH
T ss_pred hcCccCceEeeeCCCCCCccHHHc--CCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEEECCcccccCCCCH
Confidence 46789999999999 999999997 34688999999999999999999999999999999999999985 46
Q ss_pred HHHHHHHH------HcCCceeEEecCC
Q 027245 142 EQARTFSE------QTKFKGEVYADPN 162 (226)
Q Consensus 142 ~~i~~f~~------~~~~pfpll~Dp~ 162 (226)
+.+++|++ +++++||++.|.+
T Consensus 100 ~~i~~f~~~~~~~~~~~~~fp~l~d~d 126 (208)
T 2f8a_A 100 EEILNSLKYVRPGGGFEPNFMLFEKCE 126 (208)
T ss_dssp HHHHHHHHHTSSCTTCCCSSEEBCCCC
T ss_pred HHHHHHHHhcccccccccceEEEEEee
Confidence 88999998 8999999997643
No 79
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=99.73 E-value=8.9e-18 Score=142.87 Aligned_cols=88 Identities=9% Similarity=0.044 Sum_probs=79.3
Q ss_pred cCcCCCcEEecCC-CCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCC--------CHH
Q 027245 72 KNLLDTVKVYDVN-GNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG--------SVE 142 (226)
Q Consensus 72 g~~apdf~L~D~~-G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~--------~~~ 142 (226)
...+|+|++.|.+ |+.++|+++ .+++||++||++|||+|+ |+++|+++++++++.|++||+|+++ +.+
T Consensus 32 ~~~~pdF~l~d~~~G~~v~Lsd~--~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~g~~Vlgvs~d~f~~~e~~~~~ 108 (215)
T 2i3y_A 32 KGTIYDYEAIALNKNEYVSFKQY--VGKHILFVNVATYCGLTA-QYPELNALQEELKPYGLVVLGFPCNQFGKQEPGDNK 108 (215)
T ss_dssp CCCGGGCEEEBSSSSCEEEGGGG--TTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHH
T ss_pred cCCcCCcEeeeCCCCCEEcHHHh--CCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccCCeEEEEEEccccCcCCCCCHH
Confidence 5679999999999 999999997 446888899999999999 9999999999999999999999854 567
Q ss_pred HHHHHHH------HcCCceeEEecCC
Q 027245 143 QARTFSE------QTKFKGEVYADPN 162 (226)
Q Consensus 143 ~i~~f~~------~~~~pfpll~Dp~ 162 (226)
.+++|++ +++++||++.|.+
T Consensus 109 ~i~~f~~~~~~~~~~~~~fpll~d~d 134 (215)
T 2i3y_A 109 EILPGLKYVRPGGGFVPSFQLFEKGD 134 (215)
T ss_dssp HHHHHHHHTSSCTTCCCSSEEBCCCC
T ss_pred HHHHHHHhccchhccCccceeEeeec
Confidence 8999999 9999999998754
No 80
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=99.73 E-value=5.2e-18 Score=139.33 Aligned_cols=98 Identities=10% Similarity=0.124 Sum_probs=83.4
Q ss_pred CCCCccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCC-----
Q 027245 65 PSVSEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG----- 139 (226)
Q Consensus 65 ~~~~~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~----- 139 (226)
..+..+.++.+|+|++.|.+|++++++++ ++ +++|++||++|||+|+++++.|++.++++.+.|+++|+|+.+
T Consensus 18 ~~s~~~~~~~~p~f~l~~~~G~~~~l~~~-~G-k~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~ 95 (190)
T 2vup_A 18 GGSHMSAASSIFDFEVLDADHKPYNLVQH-KG-SPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQFGGQ 95 (190)
T ss_dssp ------CCCSGGGSCCBBTTSSBCCGGGG-TT-SCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCCSTTC
T ss_pred ccccCCCCCcccCeEEEcCCCCEEEHHHc-CC-CEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCccCCC
Confidence 34456789999999999999999999997 34 567778899999999999999999999999999999999987
Q ss_pred ---CHHHHHHHH-HHcCCceeEEe--cCChH
Q 027245 140 ---SVEQARTFS-EQTKFKGEVYA--DPNHS 164 (226)
Q Consensus 140 ---~~~~i~~f~-~~~~~pfpll~--Dp~~~ 164 (226)
+.+.+++|+ ++++++||++. |+++.
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~p~l~~~D~~~~ 126 (190)
T 2vup_A 96 EPGNEEEIKEFVCTKFKAEFPIMAKINVNGE 126 (190)
T ss_dssp CCSCHHHHHHHHHHHHCCCSCBBCCCBSSST
T ss_pred CCCCHHHHHHHHHHhcCCCeEEEeecccCcc
Confidence 678999999 89999999997 66554
No 81
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.72 E-value=1.3e-17 Score=128.48 Aligned_cols=105 Identities=10% Similarity=0.164 Sum_probs=93.2
Q ss_pred cccCcCCCcEE--ecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCC------CH
Q 027245 70 DTKNLLDTVKV--YDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG------SV 141 (226)
Q Consensus 70 ~~g~~apdf~L--~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~------~~ 141 (226)
.+|+.+|+|++ .|.+|+.++++++ ++ +++|++|++.|||.|+++++.|.+.++++.+. +.+++|+.+ +.
T Consensus 2 ~~g~~~P~f~~~~~~~~g~~~~~~~~-~g-k~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~-~~~~~v~~~~~~~~~~~ 78 (148)
T 2b5x_A 2 KLRQPMPELTGEKAWLNGEVTREQLI-GE-KPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQ-LNVVAVHMPRSEDDLDP 78 (148)
T ss_dssp CTTCBCCCCCCCSEEESCCCCHHHHT-TT-SCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-SEEEEEECCCSTTTSSH
T ss_pred CCCCCCCCCccccccccCcccchhhc-CC-CEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCC-cEEEEEEcCCCccccCH
Confidence 57999999999 7899999999986 44 55667777999999999999999999999876 999999987 57
Q ss_pred HHHHHHHHHcCCceeEEecCChHHHHHcCCccccce
Q 027245 142 EQARTFSEQTKFKGEVYADPNHSSYEALSFVSGVLV 177 (226)
Q Consensus 142 ~~i~~f~~~~~~pfpll~Dp~~~ly~alGv~~~~~~ 177 (226)
+.+++|+++++++||++.|.+..+.+.||+...+..
T Consensus 79 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~ 114 (148)
T 2b5x_A 79 GKIKETAAEHDITQPIFVDSDHALTDAFENEYVPAY 114 (148)
T ss_dssp HHHHHHHHHTTCCSCEEECSSCHHHHHTCCCCSSEE
T ss_pred HHHHHHHHHcCCCcceEECCchhHHHHhCCCCCCEE
Confidence 899999999999999999999999999999765544
No 82
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.72 E-value=1.4e-17 Score=130.47 Aligned_cols=103 Identities=14% Similarity=0.146 Sum_probs=93.2
Q ss_pred CccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeC---CCHHHH
Q 027245 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP---GSVEQA 144 (226)
Q Consensus 68 ~~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~---~~~~~i 144 (226)
...+|+.+|+|++.|.+|+.++++++ + +++|++||+.||+.|+.+++.|.+.++++ ++.+++|+. ++.+.+
T Consensus 4 ~l~~g~~~p~f~l~~~~g~~~~l~~~-~--k~vll~f~~~~C~~C~~~~~~l~~l~~~~---~v~~v~v~~d~~~~~~~~ 77 (154)
T 3ia1_A 4 AVKPGEPLPDFLLLDPKGQPVTPATV-S--KPAVIVFWASWCTVCKAEFPGLHRVAEET---GVPFYVISREPRDTREVV 77 (154)
T ss_dssp CCCSBEECCCCCEECTTSCEECTTTS-C--SSEEEEEECTTCHHHHHHHHHHHHHHHHH---CCCEEEEECCTTCCHHHH
T ss_pred cCCCCCcCCceEEECCCCCEechHHc-C--CeEEEEEEcccChhHHHHHHHHHHHHHHc---CCeEEEEeCCCcccHHHH
Confidence 46789999999999999999999997 3 56677777999999999999999999988 999999999 778999
Q ss_pred HHHHHHcCCceeEEec---CChHHHHHcCCccccc
Q 027245 145 RTFSEQTKFKGEVYAD---PNHSSYEALSFVSGVL 176 (226)
Q Consensus 145 ~~f~~~~~~pfpll~D---p~~~ly~alGv~~~~~ 176 (226)
++|+++++++|+++.| .+..+.+.||+...+.
T Consensus 78 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~ 112 (154)
T 3ia1_A 78 LEYMKTYPRFIPLLASDRDRPHEVAARFKVLGQPW 112 (154)
T ss_dssp HHHHTTCTTEEECBCCSSCCHHHHHTTSSBCSSCE
T ss_pred HHHHHHcCCCcccccccccchHHHHHHhCCCcccE
Confidence 9999999999999998 8899999999876554
No 83
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.72 E-value=9.9e-18 Score=133.20 Aligned_cols=106 Identities=17% Similarity=0.173 Sum_probs=94.9
Q ss_pred CccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCC--------
Q 027245 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-------- 139 (226)
Q Consensus 68 ~~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~-------- 139 (226)
...+|+.+|+|++.|.+|+.++++++ .++++|++||+.|||+|+.+++.|.+.++++. ++.+|+|+.+
T Consensus 10 ~~~~g~~~p~~~l~~~~g~~~~l~~~--~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~--~v~vv~i~~d~~~~~~~~ 85 (165)
T 3ha9_A 10 SEEVLEREASFSLTTIDGEVISLNNV--GGDVVILWFMAAWCPSCVYMADLLDRLTEKYR--EISVIAIDFWTAEALKAL 85 (165)
T ss_dssp HHHHHHHHHCCCEEBTTSCEECGGGC--CSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT--TEEEEEEECCSHHHHHHH
T ss_pred cccccCcCCCCEeecCCCCEeeHHHh--CCCEEEEEEECCCCcchhhhHHHHHHHHHHcC--CcEEEEEEeccccccccc
Confidence 36789999999999999999999997 34677777789999999999999999999987 9999999996
Q ss_pred -----------CHHHHHHHHHHcCC-ceeEEecCChHHHHHcCCcccccee
Q 027245 140 -----------SVEQARTFSEQTKF-KGEVYADPNHSSYEALSFVSGVLVT 178 (226)
Q Consensus 140 -----------~~~~i~~f~~~~~~-pfpll~Dp~~~ly~alGv~~~~~~t 178 (226)
+.+.+++|.+++++ +|+++.| +..+.+.||+...+...
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~~~~~~~~v~~~P~~~ 135 (165)
T 3ha9_A 86 GLNKPGYPPPDTPEMFRKFIANYGDPSWIMVMD-DGSLVEKFNVRSIDYIV 135 (165)
T ss_dssp TCCSTTSCCCCCHHHHHHHHHHHSCTTSEEEEC-CSHHHHHTTCCSSSEEE
T ss_pred ccccccCCCCCCHHHHHHHHHHcCCCCeeEEeC-hHHHHHHhCCCCceEEE
Confidence 67899999999999 9999999 99999999997655443
No 84
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.72 E-value=5.2e-17 Score=123.67 Aligned_cols=101 Identities=13% Similarity=0.130 Sum_probs=89.7
Q ss_pred CcCCCcEEecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCC-HHHHHHHHHHc
Q 027245 73 NLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS-VEQARTFSEQT 151 (226)
Q Consensus 73 ~~apdf~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~-~~~i~~f~~~~ 151 (226)
..+|+|++.|.+|+.++++++ +++ .+|++|++.||++|+++++.|.+.++++. ++.+++|+.++ .+.+++|++++
T Consensus 2 ~~~p~~~l~~~~g~~~~l~~~-~~k-~~lv~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~ 77 (136)
T 1lu4_A 2 DERLQFTATTLSGAPFDGASL-QGK-PAVLWFWTPWCPFCNAEAPSLSQVAAANP--AVTFVGIATRADVGAMQSFVSKY 77 (136)
T ss_dssp GGGGCCEEEBTTSCEEEGGGG-TTS-CEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSCHHHHHHHHHHH
T ss_pred CCCCCeEeecCCCCeecHHHh-CCC-EEEEEEECCcChhHHHHHHHHHHHHHHCC--CcEEEEEEcCCCHHHHHHHHHHc
Confidence 368999999999999999997 444 56666669999999999999999999886 99999999987 78999999999
Q ss_pred CCceeEEecCChHHHHHcCCccccce
Q 027245 152 KFKGEVYADPNHSSYEALSFVSGVLV 177 (226)
Q Consensus 152 ~~pfpll~Dp~~~ly~alGv~~~~~~ 177 (226)
+++|+++.|++..+.+.||+...+..
T Consensus 78 ~~~~~~~~d~~~~~~~~~~i~~~P~~ 103 (136)
T 1lu4_A 78 NLNFTNLNDADGVIWARYNVPWQPAF 103 (136)
T ss_dssp TCCSEEEECTTSHHHHHTTCCSSSEE
T ss_pred CCCceEEECCchhHHHhcCCCCCCEE
Confidence 99999999999999999998765444
No 85
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.71 E-value=8.6e-17 Score=121.95 Aligned_cols=102 Identities=13% Similarity=0.095 Sum_probs=90.4
Q ss_pred cCcCCCcEEecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCC-HHHHHHHHHH
Q 027245 72 KNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS-VEQARTFSEQ 150 (226)
Q Consensus 72 g~~apdf~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~-~~~i~~f~~~ 150 (226)
|..+|+|++.|.+|+.++++++ +++ .+|++|++.||+.|+++++.|.+.++++. ++.++.|+.++ .+.+++|.++
T Consensus 2 ~~~~p~~~~~~~~g~~~~l~~~-~~k-~~ll~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~ 77 (136)
T 1zzo_A 2 VPAQLQFSAKTLDGHDFHGESL-LGK-PAVLWFWAPWCPTCQGEAPVVGQVAASHP--EVTFVGVAGLDQVPAMQEFVNK 77 (136)
T ss_dssp CCGGGCCEEEBTTSCEEEGGGG-TTS-CEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSCHHHHHHHHHH
T ss_pred CCCCCCcccccCCCCEeeHHHh-CCC-eEEEEEEcCCChhHHHHHHHHHHHHHHcC--CeEEEEEeCCCCHHHHHHHHHH
Confidence 5679999999999999999997 444 55666679999999999999999999886 89999999876 6899999999
Q ss_pred cCC-ceeEEecCChHHHHHcCCccccce
Q 027245 151 TKF-KGEVYADPNHSSYEALSFVSGVLV 177 (226)
Q Consensus 151 ~~~-pfpll~Dp~~~ly~alGv~~~~~~ 177 (226)
+++ +|+++.|++..+.+.||+...+..
T Consensus 78 ~~~~~~~~~~d~~~~~~~~~~i~~~P~~ 105 (136)
T 1zzo_A 78 YPVKTFTQLADTDGSVWANFGVTQQPAY 105 (136)
T ss_dssp TTCTTSEEEECTTCHHHHHTTCCSSSEE
T ss_pred cCCCceEEEEcCCcHHHHHcCCCCCceE
Confidence 999 999999999999999998765544
No 86
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=99.71 E-value=1.7e-17 Score=140.06 Aligned_cols=88 Identities=9% Similarity=-0.002 Sum_probs=78.4
Q ss_pred cCcCCCcEEecCC-CCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCC--------CHH
Q 027245 72 KNLLDTVKVYDVN-GNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG--------SVE 142 (226)
Q Consensus 72 g~~apdf~L~D~~-G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~--------~~~ 142 (226)
.+.+|+|++.|.+ |+.++|+++ .+++||++||++|||+| .|+++|+++++++++.|+.||+|+++ +.+
T Consensus 14 ~~~~pdF~l~d~~~G~~v~Ls~~--kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~g~~vlgvs~d~f~~~e~~~~~ 90 (207)
T 2r37_A 14 SGTIYEYGALTIDGEEYIPFKQY--AGKYVLFVNVASYGGLT-GQYIELNALQEELAPFGLVILGFPCNQFGKQEPGENS 90 (207)
T ss_dssp -CCGGGCEEEBTTSSCEEEGGGG--TTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGGTEEEEEEECCCBTTCCCSCHH
T ss_pred cCccCCeEeeeCCCCCEEcHHHh--CCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccCCEEEEEEECcccCcCCCCCHH
Confidence 5578999999999 999999997 44688899999999999 79999999999999999999999853 567
Q ss_pred HHHHHHH------HcCCceeEEecCC
Q 027245 143 QARTFSE------QTKFKGEVYADPN 162 (226)
Q Consensus 143 ~i~~f~~------~~~~pfpll~Dp~ 162 (226)
.+++|++ +++++||++.|.+
T Consensus 91 ~i~~f~~~~~~~~~~~~~fp~l~d~d 116 (207)
T 2r37_A 91 EILPTLKYVRPGGGFVPNFQLFEKGD 116 (207)
T ss_dssp HHHHHHHHTSSCTTCCCSSEEBCCCC
T ss_pred HHHHHHHhcchhhccCccceeeeEec
Confidence 8999999 9999999998753
No 87
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.71 E-value=4.8e-17 Score=126.87 Aligned_cols=107 Identities=15% Similarity=0.175 Sum_probs=94.9
Q ss_pred ccccCcCC-CcEEecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCH-HHHHH
Q 027245 69 EDTKNLLD-TVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV-EQART 146 (226)
Q Consensus 69 ~~~g~~ap-df~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~-~~i~~ 146 (226)
..+|+.+| +|++.|.+|+.++++++ + ++++|++|++.|||.|+++++.|.+.++++.+.++.+++|+.++. +.+++
T Consensus 3 l~~G~~~p~~f~l~~~~g~~~~l~~~-~-gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~ 80 (152)
T 2lja_A 3 LRSGNPSAASFSYPDINGKTVSLADL-K-GKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWEN 80 (152)
T ss_dssp TTTTCCCSSSCEEEETTTEEEESTTT-T-TSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHH
T ss_pred cccCCCCCcccEeecCCCCEeeHHHc-C-CCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHH
Confidence 56899999 99999999999999997 3 456777788999999999999999999999888999999999864 68899
Q ss_pred HHHHcCCce-eEEecCChHHHHHcCCccccce
Q 027245 147 FSEQTKFKG-EVYADPNHSSYEALSFVSGVLV 177 (226)
Q Consensus 147 f~~~~~~pf-pll~Dp~~~ly~alGv~~~~~~ 177 (226)
|.++.++++ +++.|++..+.+.||+...+..
T Consensus 81 ~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~ 112 (152)
T 2lja_A 81 MVTKDQLKGIQLHMGTDRTFMDAYLINGIPRF 112 (152)
T ss_dssp HHHHHTCCSEEEECSSCTHHHHHTTCCSSCCE
T ss_pred HHHhcCCCCceeecCcchhHHHHcCcCCCCEE
Confidence 999999996 5889999999999999765544
No 88
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=99.54 E-value=7.2e-19 Score=139.04 Aligned_cols=102 Identities=17% Similarity=0.215 Sum_probs=92.7
Q ss_pred ccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHH-hHHHHH-HcCCEEEEEeCCCH-HHHH
Q 027245 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAA-KKDVMD-ASGVALVLIGPGSV-EQAR 145 (226)
Q Consensus 69 ~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~-~~~~l~-~~Gv~lVaIs~~~~-~~i~ 145 (226)
..+|+.+|+|++.|.+|+.++++++ .++++|++||+.|||+|+++++.|.+ .+++++ +.++.+|+|+.++. +.++
T Consensus 7 l~~g~~~p~f~l~~~~g~~~~l~~~--~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~~~~~~ 84 (159)
T 2ls5_A 7 VRIGEMAPDFTITLTDGKQVTLSSL--RGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEPLEKVL 84 (159)
Confidence 5789999999999999999999997 34567778889999999999999998 888887 78999999999875 5789
Q ss_pred HHHHHcCCceeEEecCChHHHHHcCCc
Q 027245 146 TFSEQTKFKGEVYADPNHSSYEALSFV 172 (226)
Q Consensus 146 ~f~~~~~~pfpll~Dp~~~ly~alGv~ 172 (226)
+|.++++++||++.|++..+.+.||+.
T Consensus 85 ~~~~~~~~~~~~~~d~~~~~~~~~~~~ 111 (159)
T 2ls5_A 85 AFAKSTGVTYPLGLDPGADIFAKYALR 111 (159)
Confidence 999999999999999999999999974
No 89
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.70 E-value=1.4e-16 Score=120.34 Aligned_cols=102 Identities=16% Similarity=0.168 Sum_probs=89.1
Q ss_pred cCCCcEEecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEE------eCCCHHHHHHH
Q 027245 74 LLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLI------GPGSVEQARTF 147 (226)
Q Consensus 74 ~apdf~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaI------s~~~~~~i~~f 147 (226)
++|+|++.|.+|+.++++++ + ++.+|++|++.||+.|+.+++.|.+.++++ ..++.++.| ..++.+.+++|
T Consensus 1 ~~p~f~l~~~~g~~~~l~~~-~-gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~-~~~~~~v~i~~~~~~~~~~~~~~~~~ 77 (138)
T 4evm_A 1 EVADFELMGVDGKTYRLSDY-K-GKKVYLKFWASWCSICLASLPDTDEIAKEA-GDDYVVLTVVSPGHKGEQSEADFKNW 77 (138)
T ss_dssp CCCCCEEEBTTSCEEEGGGG-T-TSEEEEEECCTTCHHHHHHHHHHHHHHHTC-TTTEEEEEEECTTSTTCCCHHHHHHH
T ss_pred CCCcceeECCCCCEEEHHHh-C-CCEEEEEEEcCcCHHHHHHHHHHHHHHHHh-CCCcEEEEEEcCCCCchhhHHHHHHH
Confidence 48999999999999999997 3 456777888999999999999999999884 568999999 55677899999
Q ss_pred HHHcCC-ceeEEecCChHHHHHcCCcccccee
Q 027245 148 SEQTKF-KGEVYADPNHSSYEALSFVSGVLVT 178 (226)
Q Consensus 148 ~~~~~~-pfpll~Dp~~~ly~alGv~~~~~~t 178 (226)
.+++++ +|+++.|++..+.+.||+...+...
T Consensus 78 ~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~ 109 (138)
T 4evm_A 78 YKGLDYKNLPVLVDPSGKLLETYGVRSYPTQA 109 (138)
T ss_dssp HTTCCCTTCCEEECTTCHHHHHTTCCSSSEEE
T ss_pred HhhcCCCCeeEEECcchHHHHHcCcccCCeEE
Confidence 999999 9999999999999999997655443
No 90
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.70 E-value=6.6e-17 Score=126.89 Aligned_cols=94 Identities=13% Similarity=0.146 Sum_probs=81.5
Q ss_pred cCCCcEEecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCC
Q 027245 74 LLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF 153 (226)
Q Consensus 74 ~apdf~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~ 153 (226)
++|+|.+. .+|++++|+++ .++++|++||+.|||+|+.+++.|.+.++++++.++.+|+|+.|+.+.+++|++++++
T Consensus 4 pa~~~~~~-~~G~~~~l~~~--~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~ 80 (151)
T 3raz_A 4 SADELAGW-KDNTPQSLQSL--KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPV 80 (151)
T ss_dssp ---CEEET-TTCCEECGGGC--CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSCC
T ss_pred Ccchhhcc-cCCCEecHHHh--CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHcCC
Confidence 44555544 79999999997 4467788888999999999999999999999889999999999999999999999999
Q ss_pred ceeEEecCC---hHHHHHcC
Q 027245 154 KGEVYADPN---HSSYEALS 170 (226)
Q Consensus 154 pfpll~Dp~---~~ly~alG 170 (226)
+||++.|.+ ..+++.||
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~ 100 (151)
T 3raz_A 81 SYPIWRYTGANSRNFMKTYG 100 (151)
T ss_dssp SSCEEEECCSCHHHHHHTTT
T ss_pred CCceEecCccchHHHHHHhC
Confidence 999999874 56889999
No 91
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=99.70 E-value=3.5e-18 Score=140.25 Aligned_cols=96 Identities=9% Similarity=0.118 Sum_probs=82.8
Q ss_pred CCccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCC-------
Q 027245 67 VSEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG------- 139 (226)
Q Consensus 67 ~~~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~------- 139 (226)
.....+..+|+|++.|.+|++++|+++ .+++||++||++|||+|..+++.|++.++++++.|++||+|+.+
T Consensus 18 ~~~~~~~~~p~f~l~d~~G~~~~l~~~--~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~e~ 95 (187)
T 3dwv_A 18 KKMSAASSIFDFEVLDADHKPYNLVQH--KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSNQFGGQEP 95 (187)
T ss_dssp --CTTCCSGGGSCCBBTTSCBCCGGGG--TTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBCCCSSCSS
T ss_pred hhhcCCCccCCeEEEcCCCCEeeHHHh--CCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECcccCCCCC
Confidence 335667899999999999999999997 34678888999999999999999999999999999999999976
Q ss_pred -CHHHHHHHHH-HcCCceeEEe--cCChH
Q 027245 140 -SVEQARTFSE-QTKFKGEVYA--DPNHS 164 (226)
Q Consensus 140 -~~~~i~~f~~-~~~~pfpll~--Dp~~~ 164 (226)
+.+.+++|++ +++++||++. |.++.
T Consensus 96 ~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 124 (187)
T 3dwv_A 96 GNEEEIKEFVCTKFKAEFPIMAKINVNGE 124 (187)
T ss_dssp SBTTHHHHSCCBCCCCSSCBBCCBCCSCC
T ss_pred CCHHHHHHHHHhccCCCCceeeccccCCc
Confidence 4678999999 4599999997 55443
No 92
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.68 E-value=2.2e-16 Score=125.56 Aligned_cols=97 Identities=14% Similarity=0.147 Sum_probs=86.5
Q ss_pred CCcEEecCCCCeEeCCCccCCCeEEEEEecCCCChh-HHHHHHHHHHhHHHHHH----cCCEEEEEeCC----CHHHHHH
Q 027245 76 DTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVL-CRKRADYLAAKKDVMDA----SGVALVLIGPG----SVEQART 146 (226)
Q Consensus 76 pdf~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~-C~~el~~L~~~~~~l~~----~Gv~lVaIs~~----~~~~i~~ 146 (226)
|+|++.|.+|++++++++ .++++|++||++||++ |+.+++.|++.++++++ .++++|+|+.| +++.+++
T Consensus 7 p~f~l~~~~G~~~~l~~~--~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~ 84 (171)
T 2rli_A 7 GDFHLLDHRGRARCKADF--RGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMAR 84 (171)
T ss_dssp SCCEEEETTSCEEETTTT--TTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHH
T ss_pred CCeEEEeCCCCEEeHHHh--CCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHH
Confidence 899999999999999997 3467888999999997 99999999999999976 58999999987 4789999
Q ss_pred HHHHcCCceeEEecCC---hHHHHHcCCccc
Q 027245 147 FSEQTKFKGEVYADPN---HSSYEALSFVSG 174 (226)
Q Consensus 147 f~~~~~~pfpll~Dp~---~~ly~alGv~~~ 174 (226)
|+++++++|+++.|.. ..+.++||+...
T Consensus 85 ~~~~~~~~~~~l~~~~~~~~~~~~~~~v~~~ 115 (171)
T 2rli_A 85 YVQDFHPRLLGLTGSTKQVAQASHSYRVYYN 115 (171)
T ss_dssp HHHTTCTTCCEEECCHHHHHHHHHHSCCCCE
T ss_pred HHHHcCCCeEEEeCCHHHHHHHHHHhCeEEE
Confidence 9999999999998754 478999998643
No 93
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.68 E-value=6.5e-17 Score=125.75 Aligned_cols=106 Identities=12% Similarity=0.061 Sum_probs=91.0
Q ss_pred ccCcCCC-cEEecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHH-cCCEEEEEeCCC-HHHHHHH
Q 027245 71 TKNLLDT-VKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA-SGVALVLIGPGS-VEQARTF 147 (226)
Q Consensus 71 ~g~~apd-f~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~-~Gv~lVaIs~~~-~~~i~~f 147 (226)
.++.+|+ |++.|.+|+.++++++ .++++|++|++.||++|+.+++.|.+.++++.+ .++.+|+|+.+. .+.+++|
T Consensus 3 ~~~~~P~~f~l~~~~g~~~~l~~~--~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~ 80 (144)
T 1i5g_A 3 LKKFFPYSTNVLKGAAADIALPSL--AGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDY 80 (144)
T ss_dssp TTTSCSSCSEEEETTEEEEEGGGG--TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHH
T ss_pred hhhhCCCceEEEcCCCCEecHHHc--CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHH
Confidence 5788999 9999999999999997 345788888999999999999999999999985 799999999984 6789999
Q ss_pred HHHcCC-ceeEEe-cCChHHHHHcCCcccccee
Q 027245 148 SEQTKF-KGEVYA-DPNHSSYEALSFVSGVLVT 178 (226)
Q Consensus 148 ~~~~~~-pfpll~-Dp~~~ly~alGv~~~~~~t 178 (226)
++++++ .++++. |++..+.+.||+...+...
T Consensus 81 ~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~ 113 (144)
T 1i5g_A 81 YAKMPWLALPFEDRKGMEFLTTGFDVKSIPTLV 113 (144)
T ss_dssp HTTCSSEECCTTCHHHHHHHHHHTTCCSSSEEE
T ss_pred HHhCCccccccCchHHHHHHHHHcCCCCCCEEE
Confidence 999886 567655 7788999999997655443
No 94
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.68 E-value=1.2e-16 Score=145.28 Aligned_cols=109 Identities=11% Similarity=0.110 Sum_probs=97.9
Q ss_pred CCCccccCcCCCcE-----EecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCC-
Q 027245 66 SVSEDTKNLLDTVK-----VYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG- 139 (226)
Q Consensus 66 ~~~~~~g~~apdf~-----L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~- 139 (226)
.....+|+.+|+|+ +.|.+|++++++++ .++++|++||+.||++|+++++.|+++++++++.++.+|+|+.+
T Consensus 48 ~~~l~vG~~aPdF~~~~~wL~d~dG~~vsLsdl--~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~ 125 (352)
T 2hyx_A 48 AAQLESCGTAPDLKGITGWLNTPGNKPIDLKSL--RGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPE 125 (352)
T ss_dssp CSSCCCCCBCCCCCSCCEEESSGGGCCCCGGGG--TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCS
T ss_pred ccccCCCCcCCCccccccccCCCCCCEEcHHHh--CCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCc
Confidence 34578899999999 99999999999997 34577888889999999999999999999999999999999874
Q ss_pred -----CHHHHHHHHHHcCCceeEEecCChHHHHHcCCccccc
Q 027245 140 -----SVEQARTFSEQTKFKGEVYADPNHSSYEALSFVSGVL 176 (226)
Q Consensus 140 -----~~~~i~~f~~~~~~pfpll~Dp~~~ly~alGv~~~~~ 176 (226)
+++.+++|+++++++||++.|++..+.+.|++...+.
T Consensus 126 ~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~~ygV~~~Pt 167 (352)
T 2hyx_A 126 YAFEKVPGNVAKGAANLGISYPIALDNNYATWTNYRNRYWPA 167 (352)
T ss_dssp SGGGGCHHHHHHHHHHHTCCSCEEECTTSHHHHHTTCCEESE
T ss_pred ccccCCHHHHHHHHHHcCCCccEEeCCcHHHHHHcCCCccCE
Confidence 5789999999999999999999999999999975544
No 95
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=99.68 E-value=1.6e-17 Score=133.69 Aligned_cols=89 Identities=17% Similarity=0.172 Sum_probs=67.4
Q ss_pred ccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeC--------CCHH
Q 027245 71 TKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP--------GSVE 142 (226)
Q Consensus 71 ~g~~apdf~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~--------~~~~ 142 (226)
-+..+|+|++.|.+|++++|+++ ++ +++|++||++||++|+ +++.|++.++++++.|+.+|+|+. ++.+
T Consensus 8 ~~~~~~~f~l~d~~G~~~~l~~~-~G-k~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~d~~~ 84 (171)
T 3cmi_A 8 HMSEFYKLAPVDKKGQPFPFDQL-KG-KVVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCNQFGHQEPGSDE 84 (171)
T ss_dssp --CGGGGCCCBBTTSCBCCGGGG-TT-CEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEECSCC--------
T ss_pred chhheeeeEEEcCCCCEecHHHc-CC-CEEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEEECcccCCCCCCCHH
Confidence 36788999999999999999997 34 5677778899999999 999999999999999999999997 4567
Q ss_pred HHHHHH-HHcCCceeEEecCC
Q 027245 143 QARTFS-EQTKFKGEVYADPN 162 (226)
Q Consensus 143 ~i~~f~-~~~~~pfpll~Dp~ 162 (226)
.+++|+ ++++++||++.|++
T Consensus 85 ~~~~~~~~~~~~~~p~~~d~d 105 (171)
T 3cmi_A 85 EIAQFCQLNYGVTFPIMKKID 105 (171)
T ss_dssp ----------CCCSCBBCCCB
T ss_pred HHHHHHHhccCCCceEEeecc
Confidence 899999 99999999998754
No 96
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=99.67 E-value=1.7e-16 Score=131.83 Aligned_cols=102 Identities=11% Similarity=0.085 Sum_probs=86.8
Q ss_pred ccccCcC--CCcEEecCCCCeEeCCCccCCCeEEEEEecCCCChh-HHHHHHHHHHhHHHHHHc---CCEEEEEeCC---
Q 027245 69 EDTKNLL--DTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVL-CRKRADYLAAKKDVMDAS---GVALVLIGPG--- 139 (226)
Q Consensus 69 ~~~g~~a--pdf~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~-C~~el~~L~~~~~~l~~~---Gv~lVaIs~~--- 139 (226)
..+|+.+ |+|++.|.+|++++++++ + ++++|++||++|||+ |+.+++.|++.++++.+. ++.+|+|+.|
T Consensus 13 ~~~g~~~~~p~f~l~d~~G~~v~l~~~-~-Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~~~ 90 (200)
T 2b7k_A 13 RGYGKPSLGGPFHLEDMYGNEFTEKNL-L-GKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPAR 90 (200)
T ss_dssp ---CCCCCCCCCEEEETTSCEEEGGGG-T-TSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCTTT
T ss_pred hccCCCCcCCCEEEEcCCCCEEeHHHc-C-CCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCCCC
Confidence 4567775 999999999999999997 3 467888889999996 999999999999999864 8999999998
Q ss_pred -CHHHHHHHHHHcCCceeEEec---CChHHHHHcCCc
Q 027245 140 -SVEQARTFSEQTKFKGEVYAD---PNHSSYEALSFV 172 (226)
Q Consensus 140 -~~~~i~~f~~~~~~pfpll~D---p~~~ly~alGv~ 172 (226)
+++.+++|+++++.+|+.+.+ ....+.++||+.
T Consensus 91 d~~~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~gv~ 127 (200)
T 2b7k_A 91 DSPAVLKEYLSDFHPSILGLTGTFDEVKNACKKYRVY 127 (200)
T ss_dssp CCHHHHHHHHTTSCTTCEEEECCHHHHHHHHHHTTC-
T ss_pred CCHHHHHHHHHHcCCCceEEeCCHHHHHHHHHHcCcE
Confidence 578999999999999998874 457889999986
No 97
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=99.67 E-value=1.5e-16 Score=128.93 Aligned_cols=101 Identities=15% Similarity=0.234 Sum_probs=86.2
Q ss_pred cccCcCC-CcEEecCCCCeEeCCCccCCCeEEEEEecCCCCh-hHHHHHHHHHHhHHHHHH--cCCEEEEEeCC---CHH
Q 027245 70 DTKNLLD-TVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCV-LCRKRADYLAAKKDVMDA--SGVALVLIGPG---SVE 142 (226)
Q Consensus 70 ~~g~~ap-df~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp-~C~~el~~L~~~~~~l~~--~Gv~lVaIs~~---~~~ 142 (226)
.+|+++| +|++.|.+|++++|+++ + ++++|++||++||| .|..+++.|++.++++.+ .++++|+|+.| +++
T Consensus 2 ~~G~~~P~~f~l~d~~G~~v~l~~~-~-Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~~ 79 (170)
T 3me7_A 2 SLGTYVPGDITLVDSYGNEFQLKNL-K-GKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLE 79 (170)
T ss_dssp CTTCBCCTTCEEEETTCCEEEGGGG-T-TSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCHH
T ss_pred CCCCcCCCCeEEEcCCcCEEchHHh-C-CCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCHH
Confidence 5799999 99999999999999997 3 46788899999998 799999999999999975 56999999976 678
Q ss_pred HHHHHHHHcCCcee---E-E-ec--CChHHHHHcCCc
Q 027245 143 QARTFSEQTKFKGE---V-Y-AD--PNHSSYEALSFV 172 (226)
Q Consensus 143 ~i~~f~~~~~~pfp---l-l-~D--p~~~ly~alGv~ 172 (226)
.+++|+++++.+++ + + .| ...++.++||+.
T Consensus 80 ~~~~~~~~~~~~~~~w~~l~~~~~~~~~~~~~~~g~~ 116 (170)
T 3me7_A 80 DIKRFQKEYGIDGKGWKVVKAKTSEDLFKLLDAIDFR 116 (170)
T ss_dssp HHHHHHHHTTCCSSSEEEEEESSHHHHHHHHHHTTCC
T ss_pred HHHHHHHHcCCCCCCeEEEeCCCHHHHHHHHHHCCeE
Confidence 99999999998775 2 2 23 446888988864
No 98
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.67 E-value=6.7e-16 Score=122.92 Aligned_cols=106 Identities=14% Similarity=0.079 Sum_probs=90.4
Q ss_pred CCCCccccCcCCCcEEecC--CCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCC-CH
Q 027245 65 PSVSEDTKNLLDTVKVYDV--NGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-SV 141 (226)
Q Consensus 65 ~~~~~~~g~~apdf~L~D~--~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~-~~ 141 (226)
......+|+.+|+|++.|. +|+.+.+.++.++ +++|++||+.|||+|+++++.|.+++++ ++.+++|+.+ +.
T Consensus 18 ~~~~~~~G~~~P~f~l~~~~~~g~~~~~~~~~~g-k~vll~F~a~~C~~C~~~~~~l~~l~~~----~v~vv~v~~~~~~ 92 (168)
T 2b1k_A 18 NLESALIGKPVPKFRLESLDNPGQFYQADVLTQG-KPVLLNVWATWCPTCRAEHQYLNQLSAQ----GIRVVGMNYKDDR 92 (168)
T ss_dssp -CCCTTTTSBCCCCEEEESSSTTCEEEGGGGCCS-SCEEEEEECTTCHHHHHHHHHHHHHHHT----TCCEEEEEESCCH
T ss_pred cccccccCCcCCCeEeecccCCCcEeehhHhcCC-CEEEEEEECCCCHHHHHHHHHHHHHHHC----CCEEEEEECCCCh
Confidence 4445678999999999999 9999999886555 4566677799999999999999887764 8999999975 56
Q ss_pred HHHHHHHHHcCCcee-EEecCChHHHHHcCCcccc
Q 027245 142 EQARTFSEQTKFKGE-VYADPNHSSYEALSFVSGV 175 (226)
Q Consensus 142 ~~i~~f~~~~~~pfp-ll~Dp~~~ly~alGv~~~~ 175 (226)
+.+++|.++++++|+ ++.|++..+.+.||+...+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P 127 (168)
T 2b1k_A 93 QKAISWLKELGNPYALSLFDGDGMLGLDLGVYGAP 127 (168)
T ss_dssp HHHHHHHHHHCCCCSEEEEETTCHHHHHHTCCSSS
T ss_pred HHHHHHHHHcCCCCceeeECcchHHHHHcCccccC
Confidence 789999999999999 7899999999999997655
No 99
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.65 E-value=4.5e-16 Score=121.58 Aligned_cols=106 Identities=17% Similarity=0.069 Sum_probs=86.7
Q ss_pred CCCCccccCcCCCcEEecCCC--------CeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEE
Q 027245 65 PSVSEDTKNLLDTVKVYDVNG--------NAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLI 136 (226)
Q Consensus 65 ~~~~~~~g~~apdf~L~D~~G--------~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaI 136 (226)
+.+...+|+.+|+|++.|.+| +.++++++ + ++++|++|++.||++|+++++.|.+.+++ .++.+++|
T Consensus 4 ~~~~~~~g~~~p~f~l~~~~g~~~~~~~~~~~~l~~~-~-gk~~ll~f~~~~C~~C~~~~~~l~~l~~~---~~v~~v~v 78 (156)
T 1kng_A 4 RIPSALIGRPAPQTALPPLEGLQADNVQVPGLDPAAF-K-GKVSLVNVWASWCVPCHDEAPLLTELGKD---KRFQLVGI 78 (156)
T ss_dssp --------CBCCCCCBCCCTTCEETTEECCCBCGGGG-T-TSCEEEEEECTTCHHHHHHHHHHHHHTTC---TTSEEEEE
T ss_pred chhhHHhCCCCCCceeeeccCcccccccCceechHHh-C-CCEEEEEEEcccCHhHHHHHHHHHHHHhc---CCeEEEEE
Confidence 344578899999999999999 99999997 3 45667777899999999999999988775 45999999
Q ss_pred eCC-CHHHHHHHHHHcCCcee-EEecCChHHHHHcCCcccc
Q 027245 137 GPG-SVEQARTFSEQTKFKGE-VYADPNHSSYEALSFVSGV 175 (226)
Q Consensus 137 s~~-~~~~i~~f~~~~~~pfp-ll~Dp~~~ly~alGv~~~~ 175 (226)
+.+ +.+.+++|+++++++|+ ++.|++..+.+.||+...+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P 119 (156)
T 1kng_A 79 NYKDAADNARRFLGRYGNPFGRVGVDANGRASIEWGVYGVP 119 (156)
T ss_dssp EESCCHHHHHHHHHHHCCCCSEEEEETTSHHHHHTTCCSSC
T ss_pred ECCCCHHHHHHHHHHcCCCCceeeeCchhHHHHhcCcCccC
Confidence 975 56889999999999999 9999999999999997655
No 100
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.65 E-value=3.5e-16 Score=122.04 Aligned_cols=106 Identities=11% Similarity=0.056 Sum_probs=90.0
Q ss_pred cccCcCCC-cEEecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHH-cCCEEEEEeCCC-HHHHHH
Q 027245 70 DTKNLLDT-VKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA-SGVALVLIGPGS-VEQART 146 (226)
Q Consensus 70 ~~g~~apd-f~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~-~Gv~lVaIs~~~-~~~i~~ 146 (226)
..++.+|+ |++.|.+| .++++++ .++++|++|++.||++|+++++.|++.++++.+ .++.+++|+.++ .+.+++
T Consensus 3 ~~~~~~P~~f~l~~~~g-~~~l~~~--~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~ 79 (146)
T 1o8x_A 3 GLDKYLPGIEKLRRGDG-EVEVKSL--AGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAG 79 (146)
T ss_dssp CGGGTSTTCCEEEETTE-EEEGGGG--TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHH
T ss_pred chHhhCCCceEEEcCCC-CCcHHHh--CCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHH
Confidence 46889999 99999999 9999997 345778888999999999999999999999984 799999999985 678999
Q ss_pred HHHHcCC-ceeEEe-cCChHHHHHcCCcccccee
Q 027245 147 FSEQTKF-KGEVYA-DPNHSSYEALSFVSGVLVT 178 (226)
Q Consensus 147 f~~~~~~-pfpll~-Dp~~~ly~alGv~~~~~~t 178 (226)
|.+++++ .++++. |.+..+.+.||+...+...
T Consensus 80 ~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~Pt~~ 113 (146)
T 1o8x_A 80 YFAKMPWLAVPFAQSEAVQKLSKHFNVESIPTLI 113 (146)
T ss_dssp HHTTCSSEECCGGGHHHHHHHHHHTTCCSSSEEE
T ss_pred HHHHCCceeeccchhhHHHHHHHHhCCCCCCEEE
Confidence 9999885 466555 7788999999987654443
No 101
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.63 E-value=3.7e-16 Score=123.26 Aligned_cols=105 Identities=10% Similarity=0.048 Sum_probs=89.7
Q ss_pred ccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCC------CHH
Q 027245 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG------SVE 142 (226)
Q Consensus 69 ~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~------~~~ 142 (226)
..+++.+| ++.|.+|+.+++.++ ++ +++|++||+.||++|+.+++.|.+.++++++.|+.+|+|+.+ +.+
T Consensus 14 ~~~~~~~p--~l~~~~g~~~~~~~~-~g-k~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~ 89 (164)
T 2h30_A 14 ATVPHTMS--TMKTADNRPASVYLK-KD-KPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDG 89 (164)
T ss_dssp CCHHHHHT--TCEETTSSBGGGGCC-TT-SCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTT
T ss_pred cccCCcCC--ccCCCCCCEeeHHHh-CC-CEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHH
Confidence 44566667 788999999999986 34 567777789999999999999999999999999999999964 457
Q ss_pred HHHHHHHHcCCc-eeEEecCChHHHHHcCCccccce
Q 027245 143 QARTFSEQTKFK-GEVYADPNHSSYEALSFVSGVLV 177 (226)
Q Consensus 143 ~i~~f~~~~~~p-fpll~Dp~~~ly~alGv~~~~~~ 177 (226)
.+++|.++.+++ ++++.|++..+.+.||+...+..
T Consensus 90 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~ 125 (164)
T 2h30_A 90 EFQKWYAGLNYPKLPVVTDNGGTIAQNLNISVYPSW 125 (164)
T ss_dssp HHHHHHTTSCCTTSCEEECTTCHHHHHTTCCSSSEE
T ss_pred HHHHHHHhCCCCcceEEEcCchHHHHHcCCCccceE
Confidence 889999998998 99999999999999998765544
No 102
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.60 E-value=1.3e-15 Score=117.83 Aligned_cols=106 Identities=14% Similarity=0.115 Sum_probs=88.5
Q ss_pred cccCcCCCc-EEecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHH-HcCCEEEEEeCCC-HHHHHH
Q 027245 70 DTKNLLDTV-KVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMD-ASGVALVLIGPGS-VEQART 146 (226)
Q Consensus 70 ~~g~~apdf-~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~-~~Gv~lVaIs~~~-~~~i~~ 146 (226)
..|+.+|+| ++.|.+| .++++++ .++++|++|++.||++|+.+++.|.+.++++. +.++.+++|+.+. .+.+++
T Consensus 3 ~~g~~~p~~~~l~~~~g-~~~l~~~--~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~ 79 (144)
T 1o73_A 3 GLAKYLPGATNLLSKSG-EVSLGSL--VGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHD 79 (144)
T ss_dssp GGGGTSCTTCCBBCTTS-CBCSGGG--TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHH
T ss_pred chhhhCccceEeecCCC-cCcHHHh--CCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHH
Confidence 568999997 9999999 9999997 34567788889999999999999999999997 4799999999986 568899
Q ss_pred HHHHcCC-ceeEEe-cCChHHHHHcCCcccccee
Q 027245 147 FSEQTKF-KGEVYA-DPNHSSYEALSFVSGVLVT 178 (226)
Q Consensus 147 f~~~~~~-pfpll~-Dp~~~ly~alGv~~~~~~t 178 (226)
|.+++++ .+++.. |.+..+.+.||+...+...
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~Pt~~ 113 (144)
T 1o73_A 80 YYGKMPWLALPFDQRSTVSELGKTFGVESIPTLI 113 (144)
T ss_dssp HHTTCSSEECCTTCHHHHHHHHHHHTCCSSSEEE
T ss_pred HHHhCCceEeeccchhHHHHHHHHcCCCCCCEEE
Confidence 9998874 355444 6778999999987655443
No 103
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.58 E-value=6.4e-16 Score=124.44 Aligned_cols=108 Identities=11% Similarity=0.057 Sum_probs=90.3
Q ss_pred ccccCcCCCc-EEecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHH-cCCEEEEEeCCCH-HHHH
Q 027245 69 EDTKNLLDTV-KVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA-SGVALVLIGPGSV-EQAR 145 (226)
Q Consensus 69 ~~~g~~apdf-~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~-~Gv~lVaIs~~~~-~~i~ 145 (226)
..+|+.+|+| ++.|.+| .++|+++ .++++|++||+.||++|+++++.|.++++++.+ .++.+|+|+.++. +.++
T Consensus 22 ~~vG~~~P~f~~l~~~~g-~v~l~~~--~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~ 98 (165)
T 3s9f_A 22 SGVAKHLGEALKLRKQAD-TADMDSL--SGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFN 98 (165)
T ss_dssp CHHHHHHHHTSCEEETTE-EECSGGG--TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHH
T ss_pred hhhcccCCcceeeecCCC-cccHHHc--CCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHH
Confidence 4689999999 9999999 9999997 346788888899999999999999999999986 7999999999875 7899
Q ss_pred HHHHHcCC-ceeEEecCC-hHHHHHcCCccccceee
Q 027245 146 TFSEQTKF-KGEVYADPN-HSSYEALSFVSGVLVTF 179 (226)
Q Consensus 146 ~f~~~~~~-pfpll~Dp~-~~ly~alGv~~~~~~t~ 179 (226)
+|.++.++ .++++.|.+ ..+.+.||+...+...+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~Pt~~l 134 (165)
T 3s9f_A 99 AYYAKMPWLSIPFANRNIVEALTKKYSVESIPTLIG 134 (165)
T ss_dssp HHHTTCSSEECCTTCHHHHHHHHHHTTCCSSSEEEE
T ss_pred HHHHhCCCcccccCchhHHHHHHHHcCCCCCCEEEE
Confidence 99998875 355554443 89999999976554433
No 104
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=99.36 E-value=1.4e-16 Score=122.84 Aligned_cols=104 Identities=10% Similarity=0.132 Sum_probs=87.4
Q ss_pred CcCCCcEEecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHH--cCCEEEEEeCCC-HHHHHHHHH
Q 027245 73 NLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA--SGVALVLIGPGS-VEQARTFSE 149 (226)
Q Consensus 73 ~~apdf~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~--~Gv~lVaIs~~~-~~~i~~f~~ 149 (226)
+.+|+|++.|.+|+.+++++++++++++|++|++.|||+|+.+++.|.+.++++++ .++.+++|+.++ .+.+++|++
T Consensus 2 ~~~p~~~l~~~~g~~~~l~~~~~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~ 81 (143)
T 2lus_A 2 EFIQGIKLVKKNRCEVNANEALKDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMM 81 (143)
Confidence 56899999999999999999445553788888999999999999999999999853 589999999985 478899999
Q ss_pred HcCCcee---EEecCChHHHHHcCCccccc
Q 027245 150 QTKFKGE---VYADPNHSSYEALSFVSGVL 176 (226)
Q Consensus 150 ~~~~pfp---ll~Dp~~~ly~alGv~~~~~ 176 (226)
+++++++ +..|.+..+.+.||+...+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~ 111 (143)
T 2lus_A 82 ESHGDWLAIPYRSGPASNVTAKYGITGIPA 111 (143)
Confidence 9988865 45677788999999865443
No 105
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=99.57 E-value=9.9e-15 Score=118.59 Aligned_cols=93 Identities=16% Similarity=0.186 Sum_probs=77.9
Q ss_pred ccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEecCCCCh-hHHHHHHHHHHhHHHHHHcC--CEEEEEeCC----CH
Q 027245 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCV-LCRKRADYLAAKKDVMDASG--VALVLIGPG----SV 141 (226)
Q Consensus 69 ~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp-~C~~el~~L~~~~~~l~~~G--v~lVaIs~~----~~ 141 (226)
..+|.++|+|+|.|.+|++++|+++ .+++||++||.+||| .|..+++.|.+.++++++.| +++|.|+.| ++
T Consensus 6 ~P~~~~~PdF~L~d~~G~~v~l~d~--~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvDp~~Dtp 83 (170)
T 4hde_A 6 KPLNWDLETFQFTNQDGKPFGTKDL--KGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVDPDLDKP 83 (170)
T ss_dssp SCCCBCCCCCEEECTTSCEEEHHHH--TTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCH
T ss_pred cCCCCcCCCcEEECCCCCEEeHHHh--CCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecCcccccH
Confidence 3478899999999999999999997 456888899999998 79999999999999887655 788999864 57
Q ss_pred HHHHHHHHHcCCce---eEEecCCh
Q 027245 142 EQARTFSEQTKFKG---EVYADPNH 163 (226)
Q Consensus 142 ~~i~~f~~~~~~pf---pll~Dp~~ 163 (226)
+.+++|+++++..+ .++.+++.
T Consensus 84 ~~l~~y~~~~~~~~~~~~~ltg~~~ 108 (170)
T 4hde_A 84 ENLKAFIQKFTEDTSNWNLLTGYSL 108 (170)
T ss_dssp HHHHHHHTTTCSCCTTEEEEBCSCH
T ss_pred HHHHHHHHHcCCCCCCceecCcccH
Confidence 89999999988654 45666543
No 106
>4h86_A Peroxiredoxin type-2; oxidoreductase; 2.00A {Saccharomyces cerevisiae} PDB: 4dsq_A 4dsr_A 4dss_A
Probab=99.07 E-value=1e-09 Score=92.61 Aligned_cols=105 Identities=11% Similarity=0.141 Sum_probs=85.8
Q ss_pred ccccCcCCC--cEE--e-----cCC----C--CeEeCCCcc-CCCeEEEEEecCCCChhHHH-HHHHHHHhHHHH-HHcC
Q 027245 69 EDTKNLLDT--VKV--Y-----DVN----G--NAIPISDLW-KDRKAVVAFARHFGCVLCRK-RADYLAAKKDVM-DASG 130 (226)
Q Consensus 69 ~~~g~~apd--f~L--~-----D~~----G--~~v~Lsdl~-~~~~vVVvF~R~~~Cp~C~~-el~~L~~~~~~l-~~~G 130 (226)
..+++++|. ++. . +.+ | +++++++++ ++|++||+++++++.|.|.. ++|.+.+.++++ +++|
T Consensus 26 ~~v~~~~P~gdv~f~yip~~~~~~~~~~c~~P~~v~ls~~~~k~KkVVLf~vPGAFTPtCS~~hlPgf~~~~d~~~k~kG 105 (199)
T 4h86_A 26 DLVNKKFPAGDYKFQYIAISQSDADSESCKMPQTVEWSKLISENKKVIITGAPAAFSPTCTVSHIPGYINYLDELVKEKE 105 (199)
T ss_dssp TTTTSBCCCTTCEEEECCCCSSSTTSGGGTSCEEEEHHHHHHHCSEEEEEECSCTTCHHHHHTTHHHHHHHHHHHHHHSC
T ss_pred HHhCCCCCCCCceEEEecCCccccccccCCCCeeeEHHHHhcCCCeEEEEEeCCCcCCcCChhhChHHHHHHHHHHHhcC
Confidence 458899995 332 1 112 3 367777776 57889999999999999976 799999999875 7889
Q ss_pred C-EEEEEeCCCHHHHHHHHHHcCC----ceeEEecCChHHHHHcCCcc
Q 027245 131 V-ALVLIGPGSVEQARTFSEQTKF----KGEVYADPNHSSYEALSFVS 173 (226)
Q Consensus 131 v-~lVaIs~~~~~~i~~f~~~~~~----pfpll~Dp~~~ly~alGv~~ 173 (226)
+ +|++|+.+++.-.++|.+..+. .+++++|++.++.++||+..
T Consensus 106 vd~I~ciSVND~FVm~AW~k~~~~~~~~~i~~laD~~~eftkalGl~~ 153 (199)
T 4h86_A 106 VDQVIVVTVDNPFANQAWAKSLGVKDTTHIKFASDPGCAFTKSIGFEL 153 (199)
T ss_dssp CCEEEEEESSCHHHHHHHHHHTTCCCCSSEEEEECGGGHHHHHTTCEE
T ss_pred CcEEEEEEcCCHHHHHHHHHHhcccccccccccCCcchHHHHhcCcee
Confidence 8 5999999999999999998776 47899999999999999854
No 107
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=98.81 E-value=3.8e-09 Score=79.91 Aligned_cols=90 Identities=8% Similarity=0.030 Sum_probs=61.3
Q ss_pred CcCCCcEEecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEe--CCCHHHHHHHHHH
Q 027245 73 NLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG--PGSVEQARTFSEQ 150 (226)
Q Consensus 73 ~~apdf~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs--~~~~~~i~~f~~~ 150 (226)
+.+++++..|.+|+..... ...++.+|++|++.||++|++..+.|.+..+++. .++.++.|. .+....+.+-..-
T Consensus 4 ~~~~~l~~~~~~~~~~~~~--~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~-~~v~~~~v~~~~d~~~~~~~~~~v 80 (126)
T 2l57_A 4 EGIKQINFQSINVVENLEE--AKEGIPTIIMFKTDTCPYCVEMQKELSYVSKERE-GKFNIYYARLEEEKNIDLAYKYDA 80 (126)
T ss_dssp CCSSCTTTTCCSEESSTTT--CCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSS-SSCEEEEEETTSSHHHHHHHHTTC
T ss_pred cccCCCCccccchhHHHHH--HhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhc-CCeEEEEEeCCCCchHHHHHHcCC
Confidence 3455666666665543332 2345677888899999999999999999988886 689999999 6654333222223
Q ss_pred cCCceeEEecCChHH
Q 027245 151 TKFKGEVYADPNHSS 165 (226)
Q Consensus 151 ~~~pfpll~Dp~~~l 165 (226)
.++|.-++.|+++++
T Consensus 81 ~~~Pt~~~~~~~G~~ 95 (126)
T 2l57_A 81 NIVPTTVFLDKEGNK 95 (126)
T ss_dssp CSSSEEEEECTTCCE
T ss_pred cceeEEEEECCCCCE
Confidence 345666888877653
No 108
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=98.79 E-value=1.5e-09 Score=83.73 Aligned_cols=93 Identities=12% Similarity=0.126 Sum_probs=65.0
Q ss_pred ccccCcCCCcE-EecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHH---HHhHHHHHHcCCEEEEEeCCCH-HH
Q 027245 69 EDTKNLLDTVK-VYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYL---AAKKDVMDASGVALVLIGPGSV-EQ 143 (226)
Q Consensus 69 ~~~g~~apdf~-L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L---~~~~~~l~~~Gv~lVaIs~~~~-~~ 143 (226)
..+++.+|+|. +.+.++....++++ + ++.+|++|++.||++|++..+.+ .+..+++. ++.++.|..++. +.
T Consensus 4 ~~~~~~~~~f~~~~~~~~~~~~l~~~-~-~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~--~~~~~~vd~~~~~~~ 79 (134)
T 2fwh_A 4 TAQTQTHLNFTQIKTVDELNQALVEA-K-GKPVMLDLYADWCVACKEFEKYTFSDPQVQKALA--DTVLLQANVTANDAQ 79 (134)
T ss_dssp ------CCCCEECCSHHHHHHHHHHH-T-TSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTT--TSEEEEEECTTCCHH
T ss_pred ccccccCCCcEEecCHHHHHHHHHHh-c-CCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc--CcEEEEEeCCCCcch
Confidence 45678888998 66666666677665 2 45677778899999999998888 77777664 699999999753 45
Q ss_pred HHHHHHHcC---CceeEEecCChHH
Q 027245 144 ARTFSEQTK---FKGEVYADPNHSS 165 (226)
Q Consensus 144 i~~f~~~~~---~pfpll~Dp~~~l 165 (226)
...++++++ +|.-++.|+++++
T Consensus 80 ~~~l~~~~~v~~~Pt~~~~d~~G~~ 104 (134)
T 2fwh_A 80 DVALLKHLNVLGLPTILFFDGQGQE 104 (134)
T ss_dssp HHHHHHHTTCCSSSEEEEECTTSCB
T ss_pred HHHHHHHcCCCCCCEEEEECCCCCE
Confidence 556666665 4555888888775
No 109
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=98.74 E-value=1.3e-08 Score=78.26 Aligned_cols=84 Identities=10% Similarity=0.002 Sum_probs=63.3
Q ss_pred EEecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCceeEE
Q 027245 79 KVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVY 158 (226)
Q Consensus 79 ~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~pfpll 158 (226)
.+.+.+|..+.++++ .++.+|++|++.||++|+...+.|.+..+++.+ .+.++.|..+....+.+-..-.++|.-++
T Consensus 35 ~l~~~~~~~~~l~~~--~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 111 (141)
T 3hxs_A 35 KIADYENHSKEWKYL--GDKPAIVDFYADWCGPCKMVAPILEELSKEYAG-KIYIYKVNVDKEPELARDFGIQSIPTIWF 111 (141)
T ss_dssp HTCCCSSCCCCCCCC--CSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred HhhccccchhHHHHh--CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcC-ceEEEEEECCCCHHHHHHcCCCCcCEEEE
Confidence 456778888899876 456777888899999999999999999988864 59999999987644332223335666678
Q ss_pred ecCChHH
Q 027245 159 ADPNHSS 165 (226)
Q Consensus 159 ~Dp~~~l 165 (226)
.|+++.+
T Consensus 112 ~~~~g~~ 118 (141)
T 3hxs_A 112 VPMKGEP 118 (141)
T ss_dssp ECSSSCC
T ss_pred EeCCCCE
Confidence 8887653
No 110
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=98.60 E-value=9.2e-08 Score=72.76 Aligned_cols=85 Identities=8% Similarity=0.075 Sum_probs=54.0
Q ss_pred ccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHH
Q 027245 71 TKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQ 150 (226)
Q Consensus 71 ~g~~apdf~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~ 150 (226)
....+|+++ +.+++.+..... .++.+|+.|++.||++|++..+.|.+..+++. .++.++.|..+....+.+-..-
T Consensus 20 ~~~~~~~~~--~~~~~~~~~~~~--~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~-~~v~~~~vd~d~~~~l~~~~~v 94 (128)
T 3ul3_B 20 MFKKVPRLQ--QNGSNIINGVNM--KNTVIVLYFFAKWCQACTMQSTEMDKLQKYYG-KRIYLLKVDLDKNESLARKFSV 94 (128)
T ss_dssp ------CCC--CCCCSSSSBTTS--CCSEEEEEEECTTCHHHHHHHHHHHHHHHHHG-GGEEEEEEEGGGCHHHHHHTTC
T ss_pred HhccCCccc--cCCccHHHHHHc--cCCEEEEEEECCCCHHHHHHhHHHHHHHHHhc-CCeEEEEEECCCCHHHHHHcCC
Confidence 345566666 445555555443 56788888999999999999999999998886 3689999988765433222222
Q ss_pred cCCceeEEec
Q 027245 151 TKFKGEVYAD 160 (226)
Q Consensus 151 ~~~pfpll~D 160 (226)
.++|.-++.+
T Consensus 95 ~~~Pt~~~~~ 104 (128)
T 3ul3_B 95 KSLPTIILLK 104 (128)
T ss_dssp CSSSEEEEEE
T ss_pred CCcCEEEEEE
Confidence 3445444443
No 111
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=98.55 E-value=2e-08 Score=79.48 Aligned_cols=93 Identities=16% Similarity=0.165 Sum_probs=61.2
Q ss_pred ccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEec-CCCChhHHHHHHHH---HHhHHHHHHcCCEEEEEeCCCH---
Q 027245 69 EDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFAR-HFGCVLCRKRADYL---AAKKDVMDASGVALVLIGPGSV--- 141 (226)
Q Consensus 69 ~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vVVvF~R-~~~Cp~C~~el~~L---~~~~~~l~~~Gv~lVaIs~~~~--- 141 (226)
...+...+++ +..|+.+.+++. ++ +.+|++|| +.||++|+++++.| .+..+.+ ..++.++.|..+..
T Consensus 24 ~~~~~~~~~~---~~~~~~~~~a~~-~g-k~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~-~~~~~~v~vd~~~~~~~ 97 (154)
T 2ju5_A 24 RPIAAANLQW---ESYAEALEHSKQ-DH-KPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFA-GVHLHMVEVDFPQKNHQ 97 (154)
T ss_dssp CSSCCCCCCE---ECHHHHHHHHHH-HC-CCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHH-HHHCEEEEEECCSSCCC
T ss_pred hhcccCCCCC---CCHHHHHHHHHh-CC-CeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHh-cCcEEEEEecCccccCC
Confidence 3455555566 445777777764 34 45666666 99999999999999 5554433 35788888888753
Q ss_pred -----HHHHHHHHHcC---CceeEEecCChHHHH
Q 027245 142 -----EQARTFSEQTK---FKGEVYADPNHSSYE 167 (226)
Q Consensus 142 -----~~i~~f~~~~~---~pfpll~Dp~~~ly~ 167 (226)
+...+++++++ +|.-++.|+++++..
T Consensus 98 ~~~~~~~~~~l~~~~~v~~~Pt~~~~d~~G~~~~ 131 (154)
T 2ju5_A 98 PEEQRQKNQELKAQYKVTGFPELVFIDAEGKQLA 131 (154)
T ss_dssp CHHHHHHHHHHHHHTTCCSSSEEEEECTTCCEEE
T ss_pred ChhhHhhHHHHHHHcCCCCCCEEEEEcCCCCEEE
Confidence 23344555554 555688888876543
No 112
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.49 E-value=3e-07 Score=69.37 Aligned_cols=68 Identities=7% Similarity=-0.038 Sum_probs=50.9
Q ss_pred CCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCceeEEecCChH
Q 027245 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYADPNHS 164 (226)
Q Consensus 96 ~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~pfpll~Dp~~~ 164 (226)
.++.+|++|++.||++|++..+.|.+..+++.+ .+.++.|.++....+.+-..-.++|.-++.|+++.
T Consensus 34 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~~~~ 101 (130)
T 2dml_A 34 SDGLWLVEFYAPWCGHCQRLTPEWKKAATALKD-VVKVGAVNADKHQSLGGQYGVQGFPTIKIFGANKN 101 (130)
T ss_dssp CSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTT-TSEEEEEETTTCHHHHHHHTCCSSSEEEEESSCTT
T ss_pred CCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcC-ceEEEEEeCCCCHHHHHHcCCCccCEEEEEeCCCC
Confidence 456788888999999999999999999888764 38999999987544333223335666677787765
No 113
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=98.48 E-value=2.5e-07 Score=70.43 Aligned_cols=68 Identities=15% Similarity=0.198 Sum_probs=50.1
Q ss_pred CeEEEEEecCCCChhHHHHHHHHH--HhHHHHHHcCCEEEEEeCCCHHHHHHHHHHc------CCceeEEecCChHH
Q 027245 97 RKAVVAFARHFGCVLCRKRADYLA--AKKDVMDASGVALVLIGPGSVEQARTFSEQT------KFKGEVYADPNHSS 165 (226)
Q Consensus 97 ~~vVVvF~R~~~Cp~C~~el~~L~--~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~------~~pfpll~Dp~~~l 165 (226)
++.+|++|++.||++|+...+.|. +..+++.+ ++.++.|..++.+....+++++ ++|.-++.|+++++
T Consensus 29 ~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~-~~~~~~vd~~~~~~~~~l~~~~~v~~~~~~Pt~~~~d~~G~~ 104 (133)
T 3fk8_A 29 HKPTLLVFGANWCTDCRALDKSLRNQKNTALIAK-HFEVVKIDVGNFDRNLELSQAYGDPIQDGIPAVVVVNSDGKV 104 (133)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHH-HCEEEEEECTTTTSSHHHHHHTTCGGGGCSSEEEEECTTSCE
T ss_pred CCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcC-CEEEEEEeCCcccchHHHHHHhCCccCCccceEEEECCCCCE
Confidence 567888889999999999999999 77887754 6999999994322222333443 45666888888764
No 114
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=98.48 E-value=1.9e-07 Score=72.65 Aligned_cols=88 Identities=15% Similarity=0.060 Sum_probs=62.4
Q ss_pred cccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHHH
Q 027245 70 DTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSE 149 (226)
Q Consensus 70 ~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~ 149 (226)
..+..+++..+.+.+++.+. ++...++.+|++|++.||++|+...+.|.+..+++.. .+.++.|..+....+.+-..
T Consensus 30 ~~~~~~~~~~v~~l~~~~~~--~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~-~~~~~~vd~~~~~~l~~~~~ 106 (148)
T 3p2a_A 30 RCGHSLFDGEVINATAETLD--KLLQDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAG-KVRFVKVNTEAEPALSTRFR 106 (148)
T ss_dssp TTCCBTTCCCCEECCTTTHH--HHTTCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHHTT
T ss_pred hcCCccccCCceecCHHHHH--HHHhcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCC-ceEEEEEECcCCHHHHHHCC
Confidence 44667788888888777654 3335567788888999999999999999999988754 49999999887654332222
Q ss_pred HcCCceeEEec
Q 027245 150 QTKFKGEVYAD 160 (226)
Q Consensus 150 ~~~~pfpll~D 160 (226)
-.++|.-++.+
T Consensus 107 v~~~Pt~~~~~ 117 (148)
T 3p2a_A 107 IRSIPTIMLYR 117 (148)
T ss_dssp CCSSSEEEEEE
T ss_pred CCccCEEEEEE
Confidence 23445434443
No 115
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=98.45 E-value=7.9e-08 Score=72.50 Aligned_cols=80 Identities=10% Similarity=0.122 Sum_probs=55.7
Q ss_pred EecCCCCeEeCCC-ccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCceeEE
Q 027245 80 VYDVNGNAIPISD-LWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVY 158 (226)
Q Consensus 80 L~D~~G~~v~Lsd-l~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~pfpll 158 (226)
+.+.+|....|.+ +.+.++.+|++|++.||+.|+...+.|.+..+++ .++.++.|..+....+.+-..-.++|.-++
T Consensus 5 v~~~~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~--~~v~~~~vd~~~~~~~~~~~~i~~~Pt~~~ 82 (118)
T 2f51_A 5 IVHFNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEAN--KDVTFIKVDVDKNGNAADAYGVSSIPALFF 82 (118)
T ss_dssp SEEECSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC--TTSEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred ceEecCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC--CCeEEEEEECCCCHHHHHhcCCCCCCEEEE
Confidence 3455566666663 3334567888889999999999999999988887 689999999986543322222234555566
Q ss_pred ecC
Q 027245 159 ADP 161 (226)
Q Consensus 159 ~Dp 161 (226)
.|.
T Consensus 83 ~~~ 85 (118)
T 2f51_A 83 VKK 85 (118)
T ss_dssp EEE
T ss_pred EeC
Confidence 665
No 116
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=98.42 E-value=1.6e-07 Score=76.42 Aligned_cols=68 Identities=16% Similarity=0.212 Sum_probs=50.4
Q ss_pred CCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHH-HHHHHHH--HcCCceeEEecCChHH
Q 027245 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE-QARTFSE--QTKFKGEVYADPNHSS 165 (226)
Q Consensus 96 ~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~-~i~~f~~--~~~~pfpll~Dp~~~l 165 (226)
+++++|+.||++|||+|+.++|.|.+..+++. ++.++.|..|... .+++|.+ -.++|--++.|.++.+
T Consensus 53 ~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~--~v~~~~v~~d~~~~~~~~~~~~~v~~iPt~i~~~~~G~~ 123 (167)
T 1z6n_A 53 ERRYRLLVAGEMWCPDCQINLAALDFAQRLQP--NIELAIISKGRAEDDLRQRLALERIAIPLVLVLDEEFNL 123 (167)
T ss_dssp CSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT--TEEEEEECHHHHHHHTTTTTTCSSCCSSEEEEECTTCCE
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHCC--CcEEEEEECCCCHHHHHHHHHcCCCCcCeEEEECCCCCE
Confidence 35678888999999999999999999887653 6888888876543 3344542 2356666888887554
No 117
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.42 E-value=3.4e-07 Score=69.99 Aligned_cols=61 Identities=16% Similarity=0.211 Sum_probs=46.4
Q ss_pred EecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcC--CEEEEEeCCCHH
Q 027245 80 VYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASG--VALVLIGPGSVE 142 (226)
Q Consensus 80 L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~G--v~lVaIs~~~~~ 142 (226)
+.+.+++.+. ++...++.+|++|++.||+.|++..+.|.+..+++.+.+ +.++.|.++...
T Consensus 19 v~~l~~~~~~--~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~ 81 (140)
T 2dj1_A 19 VWVLNDGNFD--NFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSAS 81 (140)
T ss_dssp EEECCTTTHH--HHHTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCH
T ss_pred CEEcChHhHH--HHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccH
Confidence 4444555433 334556788999999999999999999999999988764 888888877643
No 118
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=98.42 E-value=2.5e-07 Score=68.47 Aligned_cols=69 Identities=10% Similarity=0.041 Sum_probs=50.2
Q ss_pred CCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCceeEEec
Q 027245 90 ISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYAD 160 (226)
Q Consensus 90 Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~pfpll~D 160 (226)
|.+..+.++.+|++|++.||+.|++..+.|.+..+++. ++.++.|..+....+.+-..-.++|.-++.+
T Consensus 17 f~~~~~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~--~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~ 85 (109)
T 3f3q_A 17 FDSAIAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYP--QADFYKLDVDELGDVAQKNEVSAMPTLLLFK 85 (109)
T ss_dssp HHHHTTSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTCHHHHHHTTCCSSSEEEEEE
T ss_pred HHHHHhcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC--CCEEEEEECCCCHHHHHHcCCCccCEEEEEE
Confidence 33444556788999999999999999999999988874 5899999988654443322333456555556
No 119
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=98.42 E-value=5.2e-07 Score=69.37 Aligned_cols=69 Identities=9% Similarity=0.038 Sum_probs=51.1
Q ss_pred CCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCceeEEecCChHH
Q 027245 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYADPNHSS 165 (226)
Q Consensus 96 ~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~pfpll~Dp~~~l 165 (226)
+++.+|++|++.||++|++..+.|.+..+++.+ ++.++.|..+....+.+-..-.++|.-++.|+++++
T Consensus 37 ~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~~G~~ 105 (136)
T 2l5l_A 37 GDKPAIVDFYADWCGPCKMVAPILDELAKEYDG-QIVIYKVDTEKEQELAGAFGIRSIPSILFIPMEGKP 105 (136)
T ss_dssp CSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHHTTCCSSCEEEEECSSSCC
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcC-CEEEEEEeCCCCHHHHHHcCCCCCCEEEEECCCCcE
Confidence 456778888999999999999999998888764 599999999875433222223345666788887764
No 120
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=98.40 E-value=8.8e-09 Score=82.75 Aligned_cols=118 Identities=9% Similarity=0.107 Sum_probs=68.0
Q ss_pred CCCcEEecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHH--HHHHHHH-c
Q 027245 75 LDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ--ARTFSEQ-T 151 (226)
Q Consensus 75 apdf~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~--i~~f~~~-~ 151 (226)
.+++...|.+ +.+..... .++.||+.|++.||++|+.+.+.|.+..+.. +.++.++.|..+.... .+.|.-. .
T Consensus 27 ~~~i~w~~~~-~~~~~~~~--~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~-~~~~~~~~v~~d~~~~~~~~~~~~~~~ 102 (164)
T 1sen_A 27 GDHIHWRTLE-DGKKEAAA--SGLPLMVIIHKSWCGACKALKPKFAESTEIS-ELSHNFVMVNLEDEEEPKDEDFSPDGG 102 (164)
T ss_dssp CTTSCBCCHH-HHHHHHHH--HTCCEEEEEECTTCHHHHHHHHHHHTCHHHH-HHHTTSEEEEEEGGGSCSCGGGCTTCS
T ss_pred cccccccCHH-HHHHHHHh--cCCeEEEEEECCCCHHHHHHHHHHHHHHHHh-hcCCeEEEEEecCCchHHHHHhcccCC
Confidence 3344444443 34444332 3456777888999999999999999976544 3457788888776532 2333211 3
Q ss_pred CCceeEEecCChHHHH-HcCCccccce---eecchhhHHHHHHHHhhhc
Q 027245 152 KFKGEVYADPNHSSYE-ALSFVSGVLV---TFTPKAGLKIIQSYMEGYR 196 (226)
Q Consensus 152 ~~pfpll~Dp~~~ly~-alGv~~~~~~---t~~p~a~~~~~~~~~~G~r 196 (226)
++|.-++.|+++++.. ..|....... ..........++.++..+.
T Consensus 103 ~~Pt~~~~d~~G~~~~~~~G~~~~~~~~~~~~~~~~l~~~l~~~l~~~~ 151 (164)
T 1sen_A 103 YIPRILFLDPSGKVHPEIINENGNPSYKYFYVSAEQVVQGMKEAQERLT 151 (164)
T ss_dssp CSSEEEEECTTSCBCTTCCCTTSCTTSTTCCCSHHHHHHHHHHHHHHHG
T ss_pred cCCeEEEECCCCCEEEEEeCCCCccchhcccCCHHHHHHHHHHHHHhcc
Confidence 4777788998877533 3333211110 1233445555555555444
No 121
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=98.37 E-value=3.6e-07 Score=72.17 Aligned_cols=101 Identities=13% Similarity=0.048 Sum_probs=60.6
Q ss_pred CCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCceeEEecCChH-HHHHcCCccc
Q 027245 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYADPNHS-SYEALSFVSG 174 (226)
Q Consensus 96 ~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~pfpll~Dp~~~-ly~alGv~~~ 174 (226)
.++.||+.||+.||++|+.+.+.|.+..+++.+. +.++.|..+....+.+-..-.++|.-+ .+.+++ ++-.+|-...
T Consensus 22 ~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~-~~~~~vd~d~~~~l~~~~~v~~~Pt~~-~~~~G~~v~~~~g~~~~ 99 (149)
T 3gix_A 22 AEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKM-AAIYLVDVDQTAVYTQYFDISYIPSTV-FFFNGQHMKVDYGSPDH 99 (149)
T ss_dssp CSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTT-EEEEEEETTTCCHHHHHTTCCSSSEEE-EEETTEEEEEECSSSCC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCc-eEEEEEECCcCHHHHHHcCCCccCeEE-EEECCeEEEeecCCCCC
Confidence 4578889999999999999999999998887543 889999987654333222222445444 444443 2222222211
Q ss_pred -cce--eecchhhHHHHHHHHhhhccc
Q 027245 175 -VLV--TFTPKAGLKIIQSYMEGYRQD 198 (226)
Q Consensus 175 -~~~--t~~p~a~~~~~~~~~~G~r~~ 198 (226)
... ......+...+..+.+|.+++
T Consensus 100 ~~~~G~~~~~~~l~~~l~~~~~~~~~g 126 (149)
T 3gix_A 100 TKFVGSFKTKQDFIDLIEVIYRGAMRG 126 (149)
T ss_dssp SCEESCCSSHHHHHHHHHHHHHHHHTT
T ss_pred CeEeeecCCHHHHHHHHHHHHHHhhcC
Confidence 111 112345555666666665544
No 122
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.37 E-value=1.6e-07 Score=71.23 Aligned_cols=82 Identities=13% Similarity=0.135 Sum_probs=54.6
Q ss_pred EEecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHH-cCCEEEEEeCCCHHHHHHHHHHcC---Cc
Q 027245 79 KVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA-SGVALVLIGPGSVEQARTFSEQTK---FK 154 (226)
Q Consensus 79 ~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~-~Gv~lVaIs~~~~~~i~~f~~~~~---~p 154 (226)
.+.+.+++.+.-.- ...++.+|++|++.||++|++..+.|.+..+++.. .++.++.|.++....+ +++++ +|
T Consensus 8 ~v~~l~~~~~~~~~-~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~~~---~~~~~v~~~P 83 (133)
T 2dj3_A 8 PVKVVVGKTFDAIV-MDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDIT---NDQYKVEGFP 83 (133)
T ss_dssp SSEECCTTTCCCCC-TCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSCCC---CSSCCCSSSS
T ss_pred ceEEEcCCCHHHHh-ccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCHHH---HhhcCCCcCC
Confidence 34445555443321 12357888899999999999999999999988875 3588888887654322 23333 55
Q ss_pred eeEEecCChH
Q 027245 155 GEVYADPNHS 164 (226)
Q Consensus 155 fpll~Dp~~~ 164 (226)
.-++.|.++.
T Consensus 84 t~~~~~~g~~ 93 (133)
T 2dj3_A 84 TIYFAPSGDK 93 (133)
T ss_dssp EEEEECTTCT
T ss_pred EEEEEeCCCc
Confidence 5566776553
No 123
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=98.37 E-value=1.8e-07 Score=74.60 Aligned_cols=68 Identities=18% Similarity=0.215 Sum_probs=46.0
Q ss_pred CCeEEEEEecCCCChhHHHHHHHH---HHhHHHHHHcCCEEEEEeCCCHHH---------------------------HH
Q 027245 96 DRKAVVAFARHFGCVLCRKRADYL---AAKKDVMDASGVALVLIGPGSVEQ---------------------------AR 145 (226)
Q Consensus 96 ~~~vVVvF~R~~~Cp~C~~el~~L---~~~~~~l~~~Gv~lVaIs~~~~~~---------------------------i~ 145 (226)
.+++||+.||+.||++|++..+.+ .+..+.+++ ++.++.|..++... .+
T Consensus 46 ~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (172)
T 3f9u_A 46 HNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINN-DYVLITLYVDNKTPLTEPVKIMENGTERTLRTVGDKWSYLQRV 124 (172)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHH-HCEEEEEETTCCCEEEEEEEEEETTEEEEEEEHHHHHHHHHHH
T ss_pred cCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC-CEEEEEEecCcccccchhhhhhhcchhhhhhhhhhhhhHHHHH
Confidence 467899999999999999864333 334444433 79999999875431 12
Q ss_pred HHHHHcCCceeEEecCChHH
Q 027245 146 TFSEQTKFKGEVYADPNHSS 165 (226)
Q Consensus 146 ~f~~~~~~pfpll~Dp~~~l 165 (226)
.| .-.++|.-++.|+++++
T Consensus 125 ~~-~v~~~Pt~~lid~~G~~ 143 (172)
T 3f9u_A 125 KF-GANAQPFYVLIDNEGNP 143 (172)
T ss_dssp HH-SCCCSSEEEEECTTSCB
T ss_pred Hc-CCCCcceEEEECCCCCE
Confidence 22 22357777889998865
No 124
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.34 E-value=8.1e-07 Score=66.89 Aligned_cols=44 Identities=7% Similarity=-0.056 Sum_probs=39.2
Q ss_pred EEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHH
Q 027245 100 VVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ 143 (226)
Q Consensus 100 VVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~ 143 (226)
+|++|++.||++|++..+.|.+..+++.+.++.++.|.++....
T Consensus 25 vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~~~ 68 (126)
T 1x5e_A 25 WMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQPG 68 (126)
T ss_dssp EEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTCHH
T ss_pred EEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCCHH
Confidence 78888999999999999999999998887789999999886543
No 125
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=98.34 E-value=3.4e-07 Score=66.96 Aligned_cols=69 Identities=9% Similarity=0.028 Sum_probs=46.5
Q ss_pred CCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCceeEEec
Q 027245 90 ISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYAD 160 (226)
Q Consensus 90 Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~pfpll~D 160 (226)
|.++.+.++.+|++|++.||++|+...+.|.+..+++. ++.++.|..+....+.+-..-.++|--++.+
T Consensus 11 ~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~--~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~ 79 (105)
T 4euy_A 11 LATYIEEQQLVLLFIKTENCGVCDVMLRKVNYVLENYN--YVEKIEILLQDMQEIAGRYAVFTGPTVLLFY 79 (105)
T ss_dssp CSSSTTCSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT--TEEEEEEEECCC---------CCCCEEEEEE
T ss_pred HHHHHhcCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC--CceEEEEECCCCHHHHHhcCCCCCCEEEEEe
Confidence 44555566789999999999999999999999988873 7899999988654332222233455444444
No 126
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=98.32 E-value=1.3e-06 Score=64.18 Aligned_cols=64 Identities=13% Similarity=-0.036 Sum_probs=45.8
Q ss_pred CeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCC--HHHHHHHHHHcCCceeEEecCChH
Q 027245 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS--VEQARTFSEQTKFKGEVYADPNHS 164 (226)
Q Consensus 97 ~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~--~~~i~~f~~~~~~pfpll~Dp~~~ 164 (226)
++.+|+.|++.||++|++..+.|.+..+++. ++.++.|..++ .+..++| .-.++|. ++.+++++
T Consensus 24 ~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~--~v~~~~vd~~~~~~~~~~~~-~v~~~Pt-~~~~~~G~ 89 (111)
T 2pu9_C 24 DKPVVLDMFTQWCGPSKAMAPKYEKLAEEYL--DVIFLKLDCNQENKTLAKEL-GIRVVPT-FKILKENS 89 (111)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSTTHHHHHHH-CCSBSSE-EEEESSSS
T ss_pred CCEEEEEEECCcCHhHHHHCHHHHHHHHHCC--CeEEEEEecCcchHHHHHHc-CCCeeeE-EEEEeCCc
Confidence 4667888889999999999999999888775 59999999873 2322333 2223444 56666654
No 127
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=98.31 E-value=6.1e-07 Score=66.92 Aligned_cols=70 Identities=9% Similarity=-0.021 Sum_probs=51.1
Q ss_pred CCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCceeEEecCChHH
Q 027245 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYADPNHSS 165 (226)
Q Consensus 95 ~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~pfpll~Dp~~~l 165 (226)
+.++.+|++|++.||++|+...+.|.+..+++.+ ++.++.|..+....+.+-..-.++|.-++.|.++.+
T Consensus 19 ~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~~~~ 88 (122)
T 3aps_A 19 QGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKG-KVRAGKVDCQAYPQTCQKAGIKAYPSVKLYQYERAK 88 (122)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTTCHHHHHHTTCCSSSEEEEEEEEGGG
T ss_pred cCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCcCCHHHHHHcCCCccceEEEEeCCCcc
Confidence 3456788888999999999999999999888764 799999999875433222222345555677776653
No 128
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=98.28 E-value=7e-07 Score=64.60 Aligned_cols=48 Identities=15% Similarity=0.079 Sum_probs=39.2
Q ss_pred cCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHH
Q 027245 94 WKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (226)
Q Consensus 94 ~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~ 142 (226)
.+.++.+|++|++.||+.|++..+.|.+..+++.+ .+.++.|..+...
T Consensus 14 ~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~-~v~~~~v~~~~~~ 61 (105)
T 1nsw_A 14 IQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHAD-KVTVAKLNVDENP 61 (105)
T ss_dssp HSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT-TCEEEEEETTTCH
T ss_pred HhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CcEEEEEECcCCH
Confidence 34556778888899999999999999998888754 4899999987643
No 129
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.28 E-value=2e-06 Score=64.72 Aligned_cols=68 Identities=10% Similarity=-0.008 Sum_probs=49.6
Q ss_pred CCeEEEEEecCCCChhHHHHHHHHHHhHHHHHH---cCCEEEEEeCCCHHHHHHHHHHcCCceeEEecCCh
Q 027245 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA---SGVALVLIGPGSVEQARTFSEQTKFKGEVYADPNH 163 (226)
Q Consensus 96 ~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~---~Gv~lVaIs~~~~~~i~~f~~~~~~pfpll~Dp~~ 163 (226)
.++.+|++|++.||++|++..+.+.+..+++.+ .++.++.|.++....+.+-..-.++|.-++.|+..
T Consensus 24 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~ 94 (133)
T 1x5d_A 24 SEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIKIFQKGE 94 (133)
T ss_dssp SSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCCHHHHHHTCCSSSEEEEEETTE
T ss_pred CCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCHHHHHhCCCCeeCeEEEEeCCC
Confidence 456788889999999999999999999888874 56899999987653332222233566556777643
No 130
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=98.26 E-value=5.6e-07 Score=67.81 Aligned_cols=67 Identities=13% Similarity=0.025 Sum_probs=48.8
Q ss_pred cCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCceeEEec
Q 027245 94 WKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYAD 160 (226)
Q Consensus 94 ~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~pfpll~D 160 (226)
++.++.+|++|++.||+.|++..+.|.+..+++.+.++.++.|..+....+.+-..-.++|.-++.+
T Consensus 30 l~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~~~~~~~~~v~~~Pt~~~~~ 96 (121)
T 2j23_A 30 TGGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQSQIAQEVGIRAMPTFVFFK 96 (121)
T ss_dssp HSSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTCHHHHHHHTCCSSSEEEEEE
T ss_pred HcCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCCHHHHHHcCCCcccEEEEEE
Confidence 3456678888889999999999999999988888778999999998754332222233455444443
No 131
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=98.26 E-value=2.5e-06 Score=64.78 Aligned_cols=44 Identities=18% Similarity=0.233 Sum_probs=37.8
Q ss_pred CeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHH
Q 027245 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (226)
Q Consensus 97 ~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~ 142 (226)
++.+|++|++.||+.|++..+.|.+..+++. ++.++.|..+...
T Consensus 38 ~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~--~v~~~~vd~d~~~ 81 (124)
T 1xfl_A 38 KTLVVVDFTASWCGPCRFIAPFFADLAKKLP--NVLFLKVDTDELK 81 (124)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHHCS--SEEEEEEETTTSH
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--CcEEEEEECccCH
Confidence 5678888899999999999999999888775 7999999987643
No 132
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=98.25 E-value=1.9e-06 Score=62.92 Aligned_cols=46 Identities=15% Similarity=0.173 Sum_probs=38.9
Q ss_pred CeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHH
Q 027245 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ 143 (226)
Q Consensus 97 ~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~ 143 (226)
++.+|++|++.||++|++..+.|.+..+++.+ ++.++.|..+....
T Consensus 24 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~~~~ 69 (112)
T 1ep7_A 24 HKPIVVDFTATWCGPCKMIAPLFETLSNDYAG-KVIFLKVDVDAVAA 69 (112)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTTHH
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC-CeEEEEEECCchHH
Confidence 46677888899999999999999999888765 79999999987543
No 133
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=98.24 E-value=1.9e-06 Score=64.42 Aligned_cols=62 Identities=10% Similarity=0.056 Sum_probs=44.9
Q ss_pred CCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCceeEEe
Q 027245 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYA 159 (226)
Q Consensus 96 ~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~pfpll~ 159 (226)
.++.+|++|++.||++|++..+.|.+..+++.+ +.++.|..+....+.+-..-.++|.-++.
T Consensus 30 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~--v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~ 91 (116)
T 3qfa_C 30 GDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN--VIFLEVDVDDCQDVASECEVKSMPTFQFF 91 (116)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT--SEEEEEETTTTHHHHHHTTCCSSSEEEEE
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECCCCHHHHHHcCCccccEEEEE
Confidence 456788889999999999999999999888754 99999999865443322223344543333
No 134
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=98.24 E-value=9.7e-07 Score=63.66 Aligned_cols=64 Identities=8% Similarity=0.024 Sum_probs=46.0
Q ss_pred CCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCceeEEec
Q 027245 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYAD 160 (226)
Q Consensus 96 ~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~pfpll~D 160 (226)
.++.+|++|++.||+.|+...+.+.+..+++.+. +.++.|..+....+.+-..-.++|.-++.+
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~ 81 (106)
T 3die_A 18 ESGVQLVDFWATACGPCKMIAPVLEELAADYEGK-ADILKLDVDENPSTAAKYEVMSIPTLIVFK 81 (106)
T ss_dssp CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTTCHHHHHHTTCCSBSEEEEEE
T ss_pred cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCC-cEEEEEECCcCHHHHHhCCCcccCEEEEEe
Confidence 3456777788999999999999999999988654 999999987754433322333455444444
No 135
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=98.24 E-value=2e-07 Score=69.59 Aligned_cols=70 Identities=14% Similarity=0.139 Sum_probs=44.5
Q ss_pred ccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHH
Q 027245 71 TKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (226)
Q Consensus 71 ~g~~apdf~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~ 142 (226)
.++..+.+.+.+.+.-.-.+.+....++.+|++|++.||++|++..+.|.+..+++.+ +.++.|..+...
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~vd~~~~~ 77 (122)
T 2vlu_A 8 AAVAAEVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN--AVFLKVDVDELK 77 (122)
T ss_dssp ----CCCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTCH
T ss_pred cCCCCcceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--cEEEEEECCCCH
Confidence 3455566666553321111111001345677778899999999999999998887754 999999988643
No 136
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=98.24 E-value=2.7e-06 Score=62.38 Aligned_cols=46 Identities=15% Similarity=0.166 Sum_probs=38.4
Q ss_pred CeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHH
Q 027245 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (226)
Q Consensus 97 ~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~ 142 (226)
++.+|++|++.||++|++..+.|.+..++++..++.++.|..+...
T Consensus 21 ~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~ 66 (112)
T 3d6i_A 21 DKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADENS 66 (112)
T ss_dssp TCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTTCH
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecccCH
Confidence 5678888899999999999999999998876678999999998654
No 137
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=98.23 E-value=7.4e-07 Score=66.23 Aligned_cols=81 Identities=14% Similarity=0.032 Sum_probs=55.7
Q ss_pred EecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHH----cCCEEEEEeCCCHHHHHHHHHHcCCce
Q 027245 80 VYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA----SGVALVLIGPGSVEQARTFSEQTKFKG 155 (226)
Q Consensus 80 L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~----~Gv~lVaIs~~~~~~i~~f~~~~~~pf 155 (226)
+.+.+++.+...- ...++.+|+.|++.||++|+...+.|.+..+++.+ .++.++.|.++..+ +.+ .-.++|-
T Consensus 9 v~~l~~~~f~~~v-~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~-~~~--~v~~~Pt 84 (121)
T 2djj_A 9 VTVVVAKNYNEIV-LDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAND-VPD--EIQGFPT 84 (121)
T ss_dssp SEECCTTTTTTSS-SCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSC-CSS--CCSSSSE
T ss_pred eEEecccCHHHHh-hcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcccc-ccc--ccCcCCe
Confidence 4444555533221 13456788888999999999999999999998875 37899999987643 111 3344565
Q ss_pred eEEecCChH
Q 027245 156 EVYADPNHS 164 (226)
Q Consensus 156 pll~Dp~~~ 164 (226)
-++.|+++.
T Consensus 85 ~~~~~~~~~ 93 (121)
T 2djj_A 85 IKLYPAGAK 93 (121)
T ss_dssp EEEECSSCT
T ss_pred EEEEeCcCC
Confidence 577777654
No 138
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=98.22 E-value=2.5e-06 Score=63.80 Aligned_cols=42 Identities=17% Similarity=0.078 Sum_probs=35.6
Q ss_pred CeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCC
Q 027245 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (226)
Q Consensus 97 ~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~ 140 (226)
++.+|++|++.|||+|++..+.+.+..+++. ++.++.|..++
T Consensus 37 ~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~--~~~~~~vd~~~ 78 (124)
T 1faa_A 37 DKPVVLDMFTQWCGPCKAMAPKYEKLAEEYL--DVIFLKLDCNQ 78 (124)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSS
T ss_pred CCEEEEEEECCcCHhHHHHhHHHHHHHHHCC--CCEEEEEecCc
Confidence 4567777789999999999999999888775 69999999873
No 139
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=98.21 E-value=3.9e-06 Score=60.80 Aligned_cols=46 Identities=13% Similarity=0.037 Sum_probs=38.4
Q ss_pred CCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHH
Q 027245 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (226)
Q Consensus 96 ~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~ 142 (226)
.++.+|++|++.||++|++..+.|.+..+++.+ .+.++.|..+...
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~~ 63 (107)
T 1dby_A 18 SSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKD-KLKCVKLNTDESP 63 (107)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCH
T ss_pred CCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCC-ceEEEEEECCCCH
Confidence 356778888999999999999999998888754 4999999987653
No 140
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=98.19 E-value=4.9e-06 Score=60.86 Aligned_cols=46 Identities=20% Similarity=0.160 Sum_probs=38.7
Q ss_pred CCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHH
Q 027245 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (226)
Q Consensus 96 ~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~ 142 (226)
.++.+|++|++.||++|++..+.|.+..+++.+ .+.++.|..+...
T Consensus 22 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~~ 67 (112)
T 1t00_A 22 NDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGD-KIEIVKLNIDENP 67 (112)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCH
T ss_pred CCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcC-CeEEEEEEcCCCH
Confidence 456778888999999999999999998888754 4999999988643
No 141
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=98.18 E-value=2e-06 Score=71.29 Aligned_cols=69 Identities=10% Similarity=0.090 Sum_probs=50.3
Q ss_pred ccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcC--CEEEEEeCCCHHHHHHHHHHcCCceeEEecC
Q 027245 93 LWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASG--VALVLIGPGSVEQARTFSEQTKFKGEVYADP 161 (226)
Q Consensus 93 l~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~G--v~lVaIs~~~~~~i~~f~~~~~~pfpll~Dp 161 (226)
+...++.+++.|++.||++|+...+.|.+..+++++.+ +.++.|.++....+.+-..-.++|--++.+.
T Consensus 28 ~~~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~ 98 (241)
T 3idv_A 28 FVADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSASVLASRFDVSGYPTIKILKK 98 (241)
T ss_dssp HHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSSSEEEEEET
T ss_pred HHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCCHHHHHhcCCCcCCEEEEEcC
Confidence 34456789999999999999999999999999998766 8899998876543322222224554455544
No 142
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=98.17 E-value=6.3e-07 Score=69.05 Aligned_cols=64 Identities=16% Similarity=0.148 Sum_probs=43.9
Q ss_pred CeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCceeEEe-cCCh
Q 027245 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYA-DPNH 163 (226)
Q Consensus 97 ~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~pfpll~-Dp~~ 163 (226)
++.+|++|++.||++|++..+.|.+..+++ ++.++.|..+....+.+-..-.++|.-++. |+++
T Consensus 40 ~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~---~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~~~g 104 (133)
T 3cxg_A 40 NSSIVIKFGAVWCKPCNKIKEYFKNQLNYY---YVTLVDIDVDIHPKLNDQHNIKALPTFEFYFNLNN 104 (133)
T ss_dssp CSEEEEEEECTTCHHHHHTHHHHHGGGGTE---ECEEEEEETTTCHHHHHHTTCCSSSEEEEEEEETT
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHhc---CEEEEEEeccchHHHHHhcCCCCCCEEEEEEecCC
Confidence 467888899999999999999998876655 688888988765433221122245544444 4444
No 143
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=98.17 E-value=4.2e-06 Score=62.58 Aligned_cols=46 Identities=13% Similarity=0.068 Sum_probs=38.5
Q ss_pred CCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHH
Q 027245 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (226)
Q Consensus 96 ~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~ 142 (226)
.++.+|++|++.||+.|++..+.|.+..+++.. ++.++.|..+...
T Consensus 30 ~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~-~v~~~~vd~d~~~ 75 (119)
T 1w4v_A 30 SETPVVVDFHAQWCGPCKILGPRLEKMVAKQHG-KVVMAKVDIDDHT 75 (119)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-SSEEEEEETTTTH
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCCCCH
Confidence 345677788899999999999999998888754 5999999988654
No 144
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=98.17 E-value=4.1e-06 Score=61.75 Aligned_cols=48 Identities=10% Similarity=0.168 Sum_probs=40.0
Q ss_pred ccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHH
Q 027245 93 LWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (226)
Q Consensus 93 l~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~ 142 (226)
+++.++.+|++|++.||+.|++..+.|.+..+++. ++.++.|..+...
T Consensus 22 ~~~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~--~v~~~~vd~~~~~ 69 (112)
T 1syr_A 22 IISQNELVIVDFFAEWCGPCKRIAPFYEECSKTYT--KMVFIKVDVDEVS 69 (112)
T ss_dssp HHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTTH
T ss_pred HHccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC--CCEEEEEECCCCH
Confidence 33345778888899999999999999999888774 6999999998754
No 145
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=98.16 E-value=7e-06 Score=61.95 Aligned_cols=68 Identities=7% Similarity=-0.147 Sum_probs=47.0
Q ss_pred CCeEEEEEecCCCChhHHHHHHHHHHhHHHHHH----cCCEEEEEeCCCHHHHHHHHHHcCCceeEEecCCh
Q 027245 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA----SGVALVLIGPGSVEQARTFSEQTKFKGEVYADPNH 163 (226)
Q Consensus 96 ~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~----~Gv~lVaIs~~~~~~i~~f~~~~~~pfpll~Dp~~ 163 (226)
.++.+||.|++.||++|+...+.+.+..+++.+ .++.++.|.++....+.+-..-.++|--++.+..+
T Consensus 32 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~ 103 (127)
T 3h79_A 32 PEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYPDVIERMRVSGFPTMRYYTRID 103 (127)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCHHHHHHTTCCSSSEEEEECSSC
T ss_pred CCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccHhHHHhcCCccCCEEEEEeCCC
Confidence 357888899999999999999999999887752 45888889888654332221222344445555443
No 146
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=98.16 E-value=1.2e-06 Score=63.26 Aligned_cols=47 Identities=13% Similarity=0.077 Sum_probs=38.8
Q ss_pred CCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHH
Q 027245 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (226)
Q Consensus 95 ~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~ 142 (226)
+.++.+|++|++.||+.|+...+.|.+..+++.+ ++.++.|..+...
T Consensus 16 ~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~~ 62 (109)
T 2yzu_A 16 GQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEG-KLLVAKLDVDENP 62 (109)
T ss_dssp HHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBT-TBEEEEEETTTCH
T ss_pred cCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhC-ceEEEEEECCCCH
Confidence 3456777888899999999999999998888764 5999999987654
No 147
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=98.16 E-value=5.8e-06 Score=59.28 Aligned_cols=63 Identities=17% Similarity=0.119 Sum_probs=44.6
Q ss_pred CCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCceeEEec
Q 027245 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYAD 160 (226)
Q Consensus 96 ~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~pfpll~D 160 (226)
.++.+|++|++.|||.|++..+.|.+..+++. ++.++.|..+....+.+-..-.++|.-++.+
T Consensus 18 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~ 80 (104)
T 2vim_A 18 KGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP--EVEFAKVDVDQNEEAAAKYSVTAMPTFVFIK 80 (104)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTCHHHHHHTTCCSSSEEEEEE
T ss_pred CCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC--CCEEEEEeccCCHHHHHHcCCccccEEEEEe
Confidence 34667777889999999999999999888774 8999999998754332222223455434433
No 148
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=98.16 E-value=4.7e-06 Score=59.97 Aligned_cols=64 Identities=13% Similarity=0.127 Sum_probs=45.9
Q ss_pred CCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCceeEEecC
Q 027245 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYADP 161 (226)
Q Consensus 96 ~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~pfpll~Dp 161 (226)
+++.+|++|++.||+.|++..+.+.+..+++. ++.++.|..+....+.+...-.++|.-++.+.
T Consensus 19 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~ 82 (105)
T 3m9j_A 19 GDKLVVVDFSATWCGPCKMIKPFFHSLSEKYS--NVIFLEVDVDDCQDVASESEVKSMPTFQFFKK 82 (105)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHST--TSEEEEEETTTCHHHHHHTTCCBSSEEEEEET
T ss_pred CCCeEEEEEECCCChhhHHHHHHHHHHHHHcc--CeEEEEEEhhhhHHHHHHcCCCcCcEEEEEEC
Confidence 35678888899999999999999999988774 49999999887544333223334554444433
No 149
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=98.15 E-value=1.7e-06 Score=64.04 Aligned_cols=45 Identities=18% Similarity=0.049 Sum_probs=38.4
Q ss_pred CCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCH
Q 027245 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (226)
Q Consensus 96 ~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~ 141 (226)
.++.+|++|++.||++|++..+.|.+..+++.+ ++.++.|..+..
T Consensus 16 ~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~-~v~~~~vd~~~~ 60 (112)
T 2voc_A 16 SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGD-KLKIVKIDVDEN 60 (112)
T ss_dssp SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTT-TCEEEEEETTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC-CcEEEEEECCCC
Confidence 446778888899999999999999999888864 699999998764
No 150
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=98.15 E-value=1.1e-06 Score=65.74 Aligned_cols=46 Identities=15% Similarity=0.068 Sum_probs=38.5
Q ss_pred CCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHH
Q 027245 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (226)
Q Consensus 95 ~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~ 142 (226)
+.++.+|++|++.||+.|++..+.|.+..+++.+ +.++.|..+...
T Consensus 28 ~~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~--v~~~~vd~~~~~ 73 (114)
T 2oe3_A 28 KQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD--VRFVKCDVDESP 73 (114)
T ss_dssp HHCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT--SEEEEEETTTCH
T ss_pred hCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECCCCH
Confidence 3456788888999999999999999998887754 999999988643
No 151
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=98.14 E-value=4.1e-06 Score=60.39 Aligned_cols=45 Identities=11% Similarity=0.025 Sum_probs=38.2
Q ss_pred CCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCH
Q 027245 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (226)
Q Consensus 96 ~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~ 141 (226)
.++.+|++|++.||+.|++..+.|.+..+++.+ ++.++.|..+..
T Consensus 19 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~ 63 (107)
T 2i4a_A 19 ASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAG-KVTVAKVNIDDN 63 (107)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTT-SEEEEEEETTTC
T ss_pred CCCEEEEEEECCCChhHHHHhHHHHHHHHHhCC-cEEEEEEECCCC
Confidence 456777888899999999999999998888864 689999998764
No 152
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=98.14 E-value=5e-06 Score=59.84 Aligned_cols=47 Identities=17% Similarity=0.135 Sum_probs=39.0
Q ss_pred CCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHH
Q 027245 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ 143 (226)
Q Consensus 96 ~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~ 143 (226)
.++.+|++|++.||+.|++..+.|.+..+++. .++.++.|..+....
T Consensus 19 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~~v~~~~~~~ 65 (106)
T 1xwb_A 19 SGKLVVLDFFATWCGPCKMISPKLVELSTQFA-DNVVVLKVDVDECED 65 (106)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTT-TTEEEEEEETTTCHH
T ss_pred CCCEEEEEEECCcCHHHHHhhHHHHHHHHHhC-CCeEEEEEeccchHH
Confidence 45677888889999999999999999888775 579999999886543
No 153
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=98.13 E-value=4.4e-06 Score=60.99 Aligned_cols=46 Identities=9% Similarity=0.145 Sum_probs=38.9
Q ss_pred CCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHH
Q 027245 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (226)
Q Consensus 96 ~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~ 142 (226)
.++.+|++|++.|||.|++..+.|.+..+++.+ .+.++.|..+...
T Consensus 24 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~v~~~~v~~~~~~ 69 (115)
T 1thx_A 24 AEQPVLVYFWASWCGPCQLMSPLINLAANTYSD-RLKVVKLEIDPNP 69 (115)
T ss_dssp CSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTT-TCEEEEEESTTCH
T ss_pred CCceEEEEEECCCCHHHHHhHHHHHHHHHHhCC-cEEEEEEEcCCCH
Confidence 456788888899999999999999998888764 3999999988654
No 154
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=98.13 E-value=5.3e-06 Score=65.10 Aligned_cols=65 Identities=12% Similarity=0.118 Sum_probs=48.0
Q ss_pred CeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCceeEEecCChH
Q 027245 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYADPNHS 164 (226)
Q Consensus 97 ~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~pfpll~Dp~~~ 164 (226)
++.+|++|++.||++|++..+.|.+..+++ .++.++.|..+....+.+-..-.++|.-++.| +++
T Consensus 32 ~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~--~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~-~G~ 96 (153)
T 2wz9_A 32 KSLLVVHFWAPWAPQCAQMNEVMAELAKEL--PQVSFVKLEAEGVPEVSEKYEISSVPTFLFFK-NSQ 96 (153)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHHHHC--TTSEEEEEETTTSHHHHHHTTCCSSSEEEEEE-TTE
T ss_pred CCeEEEEEECCCCHhHHHHHHHHHHHHHHc--CCeEEEEEECCCCHHHHHHcCCCCCCEEEEEE-CCE
Confidence 567888889999999999999999988876 47999999998754333222233456556777 544
No 155
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.13 E-value=7.2e-06 Score=59.13 Aligned_cols=63 Identities=6% Similarity=-0.006 Sum_probs=46.2
Q ss_pred CCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCceeEEe
Q 027245 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYA 159 (226)
Q Consensus 96 ~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~pfpll~ 159 (226)
.++.+|++|++.||+.|+...+.|.+..+++.+ .+.++.|..+....+.+-..-.++|.-++.
T Consensus 20 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~i~~~Pt~~~~ 82 (109)
T 3tco_A 20 NNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKG-KAVFGRLNVDENQKIADKYSVLNIPTTLIF 82 (109)
T ss_dssp HSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred cCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCC-CceEEEEccccCHHHHHhcCcccCCEEEEE
Confidence 457788888999999999999999999988864 588999998765443332233345544444
No 156
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=98.12 E-value=3.8e-06 Score=60.38 Aligned_cols=46 Identities=11% Similarity=0.070 Sum_probs=37.8
Q ss_pred CCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHH
Q 027245 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (226)
Q Consensus 96 ~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~ 142 (226)
.++.+|++|++.||+.|+...+.+.+..+++.+ .+.++.|..+...
T Consensus 17 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~ 62 (105)
T 1fb6_A 17 SEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSG-KIAVYKLNTDEAP 62 (105)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCH
T ss_pred CCCcEEEEEECCCChHHHHHHHHHHHHHHHhcC-ceEEEEEcCcchH
Confidence 345677788899999999999999998887754 4899999887653
No 157
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=98.12 E-value=2.1e-06 Score=66.01 Aligned_cols=52 Identities=19% Similarity=0.222 Sum_probs=40.6
Q ss_pred EEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCH------HHHHHHHHHcCC
Q 027245 99 AVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV------EQARTFSEQTKF 153 (226)
Q Consensus 99 vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~------~~i~~f~~~~~~ 153 (226)
.+|++|++.||++|+...+.|.+..+++. +.++.|..++. +.....++++++
T Consensus 33 ~vlv~F~a~wC~~C~~~~p~l~~l~~~~~---v~~~~vd~~~~~~~~~~d~~~~l~~~~~v 90 (135)
T 3emx_A 33 DAILAVYSKTCPHCHRDWPQLIQASKEVD---VPIVMFIWGSLIGERELSAARLEMNKAGV 90 (135)
T ss_dssp SEEEEEEETTCHHHHHHHHHHHHHHTTCC---SCEEEEEECTTCCHHHHHHHHHHHHHHTC
T ss_pred cEEEEEECCcCHhhhHhChhHHHHHHHCC---CEEEEEECCCchhhhhhhhhHHHHHHcCC
Confidence 78888899999999999999999888764 88999988553 344455555554
No 158
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=98.11 E-value=6.2e-06 Score=58.69 Aligned_cols=45 Identities=11% Similarity=0.032 Sum_probs=38.2
Q ss_pred CCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHH
Q 027245 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (226)
Q Consensus 96 ~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~ 142 (226)
.++.+|++|++.|||.|+...+.+.+..+++.+ +.++.|..+...
T Consensus 15 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~v~~~~~~ 59 (104)
T 2e0q_A 15 SHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ--VGFGKLNSDENP 59 (104)
T ss_dssp HSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTCH
T ss_pred cCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC--ceEEEEECCCCH
Confidence 456788888899999999999999998887754 999999988654
No 159
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=98.10 E-value=8.1e-06 Score=61.69 Aligned_cols=65 Identities=15% Similarity=0.228 Sum_probs=47.6
Q ss_pred CeEEEEEecCC-------CChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCceeEEecCChHHHHHc
Q 027245 97 RKAVVAFARHF-------GCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYADPNHSSYEAL 169 (226)
Q Consensus 97 ~~vVVvF~R~~-------~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~pfpll~Dp~~~ly~al 169 (226)
++.+|+.|++. |||+|+...+.|.+..+++.+ ++.++.|..++... +.|++..+.+.|
T Consensus 24 ~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~-~~~~~~vd~~~~~~--------------~~d~~~~~~~~~ 88 (123)
T 1wou_A 24 GKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISE-GCVFIYCQVGEKPY--------------WKDPNNDFRKNL 88 (123)
T ss_dssp TSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCT-TEEEEEEECCCHHH--------------HHCTTCHHHHHH
T ss_pred CCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCC-CcEEEEEECCCchh--------------hhchhHHHHHHC
Confidence 56788888999 999999999999998877753 78999999975421 125555566666
Q ss_pred CCccccc
Q 027245 170 SFVSGVL 176 (226)
Q Consensus 170 Gv~~~~~ 176 (226)
++...+.
T Consensus 89 ~i~~~Pt 95 (123)
T 1wou_A 89 KVTAVPT 95 (123)
T ss_dssp CCCSSSE
T ss_pred CCCeeCE
Confidence 6654433
No 160
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=98.09 E-value=5.1e-06 Score=60.23 Aligned_cols=46 Identities=15% Similarity=0.104 Sum_probs=38.3
Q ss_pred CCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCH
Q 027245 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (226)
Q Consensus 95 ~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~ 141 (226)
+.++.+|++|++.||+.|+...+.|.+..+++.+ .+.++.|..+..
T Consensus 18 ~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~ 63 (108)
T 2trx_A 18 KADGAILVDFWAEWCGPCKMIAPILDEIADEYQG-KLTVAKLNIDQN 63 (108)
T ss_dssp TCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTTC
T ss_pred hcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCC-CcEEEEEECCCC
Confidence 3456788888999999999999999998888754 588999988764
No 161
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=98.09 E-value=4.5e-06 Score=61.91 Aligned_cols=44 Identities=18% Similarity=0.171 Sum_probs=37.4
Q ss_pred CCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHH
Q 027245 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (226)
Q Consensus 96 ~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~ 142 (226)
.++.+|++|++.||++|++..+.|.+..+++ ++.++.|..+...
T Consensus 32 ~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~---~~~~~~vd~~~~~ 75 (117)
T 2xc2_A 32 KNKLVVVDFFATWCGPCKTIAPLFKELSEKY---DAIFVKVDVDKLE 75 (117)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHTTS---SSEEEEEETTTSH
T ss_pred CCCEEEEEEECCCCHhHHHHhHHHHHHHHHc---CcEEEEEECCccH
Confidence 4567888889999999999999999887766 8999999988654
No 162
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=98.08 E-value=1.5e-06 Score=68.09 Aligned_cols=65 Identities=15% Similarity=0.095 Sum_probs=47.3
Q ss_pred CeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCC---ceeEEecCChHH
Q 027245 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF---KGEVYADPNHSS 165 (226)
Q Consensus 97 ~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~---pfpll~Dp~~~l 165 (226)
++.+|+.||+.||++|+...+.|.+..+++++ .+.++.|..+.... +++++++ |--++.+....+
T Consensus 23 ~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~d~~~~---~~~~~~i~~~Pt~~~~~~G~~v 90 (142)
T 1qgv_A 23 DRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKN-FAVIYLVDITEVPD---FNKMYELYDPCTVMFFFRNKHI 90 (142)
T ss_dssp SSEEEEEEECTTSHHHHHHHHHHHHHHHHHTT-TEEEEEEETTTCCT---TTTSSCSCSSCEEEEEETTEEE
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC-CeEEEEEccccCHH---HHHHcCCCCCCEEEEEECCcEE
Confidence 56788899999999999999999999888854 58999998886432 3445554 433444544443
No 163
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=98.08 E-value=1.6e-06 Score=68.70 Aligned_cols=50 Identities=18% Similarity=0.134 Sum_probs=40.8
Q ss_pred CccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHH
Q 027245 92 DLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (226)
Q Consensus 92 dl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~ 142 (226)
++.+.++.+|++|++.||++|+...+.|.+..+++.. .+.++.|..+...
T Consensus 59 ~~~~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~-~v~~~~vd~~~~~ 108 (155)
T 2ppt_A 59 RAERDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAG-QVRLAKIDTQAHP 108 (155)
T ss_dssp HHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTTST
T ss_pred HHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccC-CEEEEEEeCCccH
Confidence 3434456778888899999999999999999988864 4999999998654
No 164
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=98.07 E-value=4.9e-06 Score=63.55 Aligned_cols=52 Identities=19% Similarity=0.215 Sum_probs=41.2
Q ss_pred CeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCC
Q 027245 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF 153 (226)
Q Consensus 97 ~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~ 153 (226)
++.+|++|++.||++|++..+.|.+..+++ .++.++.|..+.... +++++++
T Consensus 46 ~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~--~~v~~~~v~~~~~~~---~~~~~~v 97 (139)
T 3d22_A 46 GKIVLANFSARWCGPSRQIAPYYIELSENY--PSLMFLVIDVDELSD---FSASWEI 97 (139)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHC--TTSEEEEEETTTSHH---HHHHTTC
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHC--CCCEEEEEeCcccHH---HHHHcCC
Confidence 456778888999999999999999988877 379999999986533 4445554
No 165
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=98.07 E-value=1.1e-05 Score=58.61 Aligned_cols=46 Identities=11% Similarity=0.154 Sum_probs=38.8
Q ss_pred CCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHH
Q 027245 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ 143 (226)
Q Consensus 96 ~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~ 143 (226)
.++.+|++|++.||++|++..+.|.+..+++ .++.++.|..+....
T Consensus 20 ~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~--~~~~~~~vd~~~~~~ 65 (107)
T 1gh2_A 20 GSRLAVVKFTMRGCGPCLRIAPAFSSMSNKY--PQAVFLEVDVHQCQG 65 (107)
T ss_dssp TTSCEEEEEECSSCHHHHHHHHHHHHHHHHC--TTSEEEEEETTTSHH
T ss_pred CCCEEEEEEECCCChhhHHHHHHHHHHHHHC--CCcEEEEEECccCHH
Confidence 4567888889999999999999999988887 479999999986533
No 166
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=98.07 E-value=1.2e-05 Score=58.55 Aligned_cols=61 Identities=11% Similarity=0.115 Sum_probs=45.1
Q ss_pred CeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCceeEEe
Q 027245 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYA 159 (226)
Q Consensus 97 ~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~pfpll~ 159 (226)
++.+|++|++.||+.|++..+.|.+..+++. ++.++.|..+....+.+-..-.++|.-++.
T Consensus 26 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 86 (113)
T 1ti3_A 26 QKLIVVDFTASWCPPCKMIAPIFAELAKKFP--NVTFLKVDVDELKAVAEEWNVEAMPTFIFL 86 (113)
T ss_dssp SSEEEEEEECSSCHHHHHHHHHHHHHHHHCS--SEEEEEEETTTCHHHHHHHHCSSTTEEEEE
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHhCC--CcEEEEEEccccHHHHHhCCCCcccEEEEE
Confidence 5678888899999999999999999888774 799999999875443332233456644444
No 167
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=98.06 E-value=1.2e-05 Score=58.40 Aligned_cols=48 Identities=13% Similarity=0.236 Sum_probs=39.7
Q ss_pred CCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHH
Q 027245 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ 143 (226)
Q Consensus 95 ~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~ 143 (226)
+.++.+|++|++.||+.|+...+.+.+..+++.+ .+.++.|..+....
T Consensus 20 ~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~~~~ 67 (111)
T 3gnj_A 20 DEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEE-SFGFYYVDVEEEKT 67 (111)
T ss_dssp TSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTCHH
T ss_pred hcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCC-ceEEEEEECCcChh
Confidence 3456788888899999999999999999888754 59999999987543
No 168
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=98.05 E-value=6.2e-06 Score=62.03 Aligned_cols=67 Identities=6% Similarity=0.085 Sum_probs=45.4
Q ss_pred CeEEEEEecCCCChhHHHHHHHH---HHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcC---CceeEEecCChHH
Q 027245 97 RKAVVAFARHFGCVLCRKRADYL---AAKKDVMDASGVALVLIGPGSVEQARTFSEQTK---FKGEVYADPNHSS 165 (226)
Q Consensus 97 ~~vVVvF~R~~~Cp~C~~el~~L---~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~---~pfpll~Dp~~~l 165 (226)
++.+|++|++.||+.|++..+.+ .+..+.+ +.++.++.|..+.. ....++++++ +|.-++.|+++++
T Consensus 27 ~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~-~~~~~~~~vd~~~~-~~~~~~~~~~v~~~Pt~~~~d~~G~~ 99 (130)
T 2kuc_A 27 DKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYF-NRHFVNLKMDMEKG-EGVELRKKYGVHAYPTLLFINSSGEV 99 (130)
T ss_dssp SSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHH-HHHSEEEEECSSST-THHHHHHHTTCCSSCEEEEECTTSCE
T ss_pred CCeEEEEEECCCCccHHHHHHHhcCcHHHHHHH-hcCeEEEEEecCCc-chHHHHHHcCCCCCCEEEEECCCCcE
Confidence 45678888899999999999998 4444443 34688888888741 1223444444 5656788887653
No 169
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.05 E-value=3.9e-06 Score=64.35 Aligned_cols=53 Identities=13% Similarity=0.019 Sum_probs=42.8
Q ss_pred eEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCC
Q 027245 98 KAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF 153 (226)
Q Consensus 98 ~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~ 153 (226)
+.+|++|++.||++|++..+.|.+..+++.+.++.++.|.++.... +++++++
T Consensus 27 ~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~~---~~~~~~v 79 (137)
T 2dj0_A 27 VTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYTD---VSTRYKV 79 (137)
T ss_dssp SCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTCHH---HHHHTTC
T ss_pred CEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccCHH---HHHHccC
Confidence 4788888999999999999999999998876689999998876533 3344444
No 170
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=98.04 E-value=7.3e-06 Score=59.42 Aligned_cols=47 Identities=11% Similarity=0.003 Sum_probs=38.3
Q ss_pred CeEEEEEecCCCChhHHHHHHHHHHhHHHHHH--cCCEEEEEeCCCHHH
Q 027245 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDA--SGVALVLIGPGSVEQ 143 (226)
Q Consensus 97 ~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~--~Gv~lVaIs~~~~~~ 143 (226)
++.+|+.|++.||++|+...+.+.+..+++.+ .++.++.|..+....
T Consensus 21 ~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~ 69 (111)
T 3uvt_A 21 EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERN 69 (111)
T ss_dssp SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHH
T ss_pred CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHh
Confidence 45678888999999999999999998887654 378888898876543
No 171
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=98.02 E-value=1.3e-05 Score=58.79 Aligned_cols=44 Identities=18% Similarity=0.188 Sum_probs=37.7
Q ss_pred CeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHH
Q 027245 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (226)
Q Consensus 97 ~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~ 142 (226)
++.+|++|++.||+.|++..+.|.+..+++. ++.++.|..+...
T Consensus 28 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~ 71 (118)
T 2vm1_A 28 GKLVIIDFTASWCGPCRVIAPVFAEYAKKFP--GAIFLKVDVDELK 71 (118)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTSH
T ss_pred CCEEEEEEECCCCHhHHHHhHHHHHHHHHCC--CcEEEEEEcccCH
Confidence 4567888889999999999999999888775 7999999988653
No 172
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.02 E-value=2.4e-06 Score=73.25 Aligned_cols=46 Identities=9% Similarity=0.054 Sum_probs=39.8
Q ss_pred CeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHH
Q 027245 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ 143 (226)
Q Consensus 97 ~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~ 143 (226)
+++|||.||+.||++|+...+.+.+..+++.+ .+.++.|.++....
T Consensus 26 ~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~~~~ 71 (287)
T 3qou_A 26 TTPVLFYFWSERSQHCLQLTPILESLAAQYNG-QFILAKLDCDAEQM 71 (287)
T ss_dssp TSCEEEEEECTTCTTTTTTHHHHHHHHHHHTS-SSEEEEEETTTCHH
T ss_pred CCeEEEEEECCCChHHHHHHHHHHHHHHHcCC-CeEEEEEeCccCHH
Confidence 57888999999999999999999999988863 59999999987543
No 173
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=98.01 E-value=9.6e-06 Score=61.85 Aligned_cols=47 Identities=11% Similarity=0.137 Sum_probs=39.4
Q ss_pred CCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHH
Q 027245 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ 143 (226)
Q Consensus 95 ~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~ 143 (226)
..++.+|++|++.||+.|+...+.|.+..+++ .++.++.|..+....
T Consensus 35 ~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~--~~v~~~~vd~d~~~~ 81 (125)
T 1r26_A 35 SEDILTVAWFTAVWCGPCKTIERPMEKIAYEF--PTVKFAKVDADNNSE 81 (125)
T ss_dssp HSSSCEEEEEECTTCHHHHHTHHHHHHHHHHC--TTSEEEEEETTTCHH
T ss_pred ccCCEEEEEEECCcCHhHHHHHHHHHHHHHHC--CCCEEEEEECCCCHH
Confidence 35567888889999999999999999988877 369999999986543
No 174
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=98.01 E-value=1.5e-05 Score=66.96 Aligned_cols=66 Identities=14% Similarity=0.037 Sum_probs=49.5
Q ss_pred CCeEEEEEecCCCChhHHHHHHHHHHhHHHHHH--cCCEEEEEeCCCHHHHHHHHHHcC---CceeEEecCC
Q 027245 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA--SGVALVLIGPGSVEQARTFSEQTK---FKGEVYADPN 162 (226)
Q Consensus 96 ~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~--~Gv~lVaIs~~~~~~i~~f~~~~~---~pfpll~Dp~ 162 (226)
.++.+|+.|++.||++|+...+.+.+..+++.+ .++.++.|.++.. ...+.+++++ +|--++.++.
T Consensus 29 ~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~-~~~~l~~~~~v~~~Pt~~~~~~g 99 (244)
T 3q6o_A 29 SRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEE-TNSAVCRDFNIPGFPTVRFFXAF 99 (244)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTST-TTHHHHHHTTCCSSSEEEEECTT
T ss_pred CCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCch-hhHHHHHHcCCCccCEEEEEeCC
Confidence 347888999999999999999999999999876 5799999998532 1233444554 5555677754
No 175
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=97.26 E-value=7.8e-07 Score=63.74 Aligned_cols=46 Identities=20% Similarity=0.156 Sum_probs=36.8
Q ss_pred CCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCH
Q 027245 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (226)
Q Consensus 95 ~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~ 141 (226)
+.++.+|++|++.|||.|+...+.+.+..+++.+ ++.++.|..+..
T Consensus 17 ~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~ 62 (106)
T 2yj7_A 17 KSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEG-KVKVVKVNVDEN 62 (106)
Confidence 3456778888899999999999999998887764 578888877654
No 176
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=98.00 E-value=1.9e-05 Score=58.31 Aligned_cols=46 Identities=13% Similarity=0.089 Sum_probs=38.4
Q ss_pred CCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHH
Q 027245 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (226)
Q Consensus 96 ~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~ 142 (226)
.++.+|++|++.||+.|+...+.|.+..+++.. ++.++.|..+...
T Consensus 29 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~ 74 (121)
T 2i1u_A 29 SNKPVLVDFWATWCGPCKMVAPVLEEIATERAT-DLTVAKLDVDTNP 74 (121)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCH
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEECCCCH
Confidence 356678888899999999999999998887754 5999999988654
No 177
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=97.98 E-value=3.6e-06 Score=64.31 Aligned_cols=46 Identities=13% Similarity=0.025 Sum_probs=38.9
Q ss_pred CCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCH
Q 027245 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (226)
Q Consensus 95 ~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~ 141 (226)
+.++.+|++|++.||+.|++..+.|.+..+++.+ ++.++.|..+..
T Consensus 38 ~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~~~~ 83 (128)
T 2o8v_B 38 KADGAILVDFWAEWCGPAKMIAPILDEIADEYQG-KLTVAKLNIDQN 83 (128)
T ss_dssp TCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTT-TEEEEEEETTTC
T ss_pred hcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEECCCC
Confidence 3457888899999999999999999998888764 589999998764
No 178
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=97.97 E-value=1.8e-05 Score=61.01 Aligned_cols=48 Identities=15% Similarity=0.221 Sum_probs=40.2
Q ss_pred CCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHH
Q 027245 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ 143 (226)
Q Consensus 95 ~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~ 143 (226)
+.++.+|++|++.||+.|++..+.|.+..+++.+ .+.++.|.++....
T Consensus 22 ~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~~~~ 69 (140)
T 3hz4_A 22 DSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGS-SAVFGRINIATNPW 69 (140)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TSEEEEEETTTCHH
T ss_pred hCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCC-ceEEEEEECCcCHh
Confidence 3456788888999999999999999999988865 49999999887543
No 179
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=97.97 E-value=1.5e-05 Score=59.29 Aligned_cols=55 Identities=16% Similarity=0.266 Sum_probs=40.9
Q ss_pred CCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCH---HHHHHHHHHcCC
Q 027245 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV---EQARTFSEQTKF 153 (226)
Q Consensus 96 ~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~---~~i~~f~~~~~~ 153 (226)
.++.+|++|++.|||+|++..+.|.+..+++ +..++.|..+.. +....+++++++
T Consensus 28 ~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~---~~~v~~~~~~~~~~~~~~~~~~~~~~i 85 (118)
T 1zma_A 28 KKETATFFIGRKTCPYCRKFAGTLSGVVAET---KAHIYFINSEEPSQLNDLQAFRSRYGI 85 (118)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHH---CCCCEEEETTCGGGHHHHHHHHHHHTC
T ss_pred CCCeEEEEEECCCCccHHHHHHHHHHHHHhc---CCeEEEEECCCcCcHHHHHHHHHHcCC
Confidence 4567888899999999999999999887765 355666766543 445567777665
No 180
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=97.95 E-value=2.5e-05 Score=59.87 Aligned_cols=45 Identities=11% Similarity=-0.013 Sum_probs=38.3
Q ss_pred CCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHH
Q 027245 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (226)
Q Consensus 96 ~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~ 142 (226)
.++ +|++|++.||+.|+...+.|.+..+++.. ++.++.|..+...
T Consensus 50 ~~~-vvv~f~~~~C~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~~~ 94 (140)
T 1v98_A 50 APL-TLVDFFAPWCGPCRLVSPILEELARDHAG-RLKVVKVNVDEHP 94 (140)
T ss_dssp CCE-EEEEEECTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTTCH
T ss_pred CCC-EEEEEECCCCHHHHHHHHHHHHHHHHccC-ceEEEEEECCCCH
Confidence 445 88888999999999999999999888764 5899999988654
No 181
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=97.92 E-value=2.7e-05 Score=58.03 Aligned_cols=45 Identities=22% Similarity=0.200 Sum_probs=36.9
Q ss_pred CeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHH
Q 027245 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQ 143 (226)
Q Consensus 97 ~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~ 143 (226)
++.||+.|++.||++|+...+.+.+..+++. ++.++.|..+....
T Consensus 20 ~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~--~~~~~~vd~d~~~~ 64 (105)
T 3zzx_A 20 NKLVVIDFYATWCGPCKMIAPKLEELSQSMS--DVVFLKVDVDECED 64 (105)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHCT--TEEEEEEETTTCHH
T ss_pred CCEEEEEEECCCCCCccCCCcchhhhhhccC--CeEEEEEecccCHH
Confidence 5688999999999999999999998887663 57788888776433
No 182
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=97.90 E-value=1.5e-05 Score=63.38 Aligned_cols=49 Identities=20% Similarity=0.247 Sum_probs=36.7
Q ss_pred CCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEe
Q 027245 85 GNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG 137 (226)
Q Consensus 85 G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs 137 (226)
+..+.+++- +.+++|+.|+.+|||+|++..+.|.+..++..+ ++++.+.
T Consensus 12 ~~~~~~G~~--~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~--v~~~~~~ 60 (175)
T 3gyk_A 12 PNAPVLGNP--EGDVTVVEFFDYNCPYCRRAMAEVQGLVDADPN--VRLVYRE 60 (175)
T ss_dssp TTSCEEECT--TCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--EEEEEEE
T ss_pred CCCCCcCCC--CCCEEEEEEECCCCccHHHHHHHHHHHHHhCCC--EEEEEEe
Confidence 444556653 568899999999999999999999988776543 5555544
No 183
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=97.11 E-value=1.7e-06 Score=65.37 Aligned_cols=77 Identities=9% Similarity=0.253 Sum_probs=50.5
Q ss_pred CCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHH---HHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHc---CCceeEE
Q 027245 85 GNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYL---AAKKDVMDASGVALVLIGPGSVEQARTFSEQT---KFKGEVY 158 (226)
Q Consensus 85 G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L---~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~---~~pfpll 158 (226)
.+.+.+... .++.+|++|++.||++|+...+.+ .+..+.+.+ ++.++.|..++. ....+++++ ++|.-++
T Consensus 9 ~~~~~~~~~--~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~-~~~~~~~~~~v~~~Pt~~~ 84 (130)
T 2lst_A 9 PEALALAQA--HGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEA-RFVVASVSVDTP-EGQELARRYRVPGTPTFVF 84 (130)
Confidence 455566543 456788888999999999999988 666665543 577888877532 122333343 4555577
Q ss_pred ecCC-hHH
Q 027245 159 ADPN-HSS 165 (226)
Q Consensus 159 ~Dp~-~~l 165 (226)
.|++ +++
T Consensus 85 ~d~~~G~~ 92 (130)
T 2lst_A 85 LVPKAGAW 92 (130)
Confidence 7764 554
No 184
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=97.88 E-value=1.2e-05 Score=59.38 Aligned_cols=44 Identities=14% Similarity=0.165 Sum_probs=36.0
Q ss_pred CCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCH
Q 027245 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (226)
Q Consensus 96 ~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~ 141 (226)
.++.+|++|++.||++|++..+.|.+..+++. ++.++.|..+..
T Consensus 18 ~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~--~v~~~~vd~~~~ 61 (110)
T 2l6c_A 18 GLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP--QVAISSVDSEAR 61 (110)
T ss_dssp TCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT--TSCEEEEEGGGC
T ss_pred cCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC--CcEEEEEcCcCC
Confidence 44567788899999999999999998877664 688888888654
No 185
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=97.87 E-value=1.1e-05 Score=67.22 Aligned_cols=47 Identities=15% Similarity=0.099 Sum_probs=39.9
Q ss_pred CCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHH
Q 027245 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (226)
Q Consensus 95 ~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~ 142 (226)
+.++.+|+.|++.||++|+...+.|.+..+++.+ .+.++.|.++...
T Consensus 28 ~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~d~~~ 74 (222)
T 3dxb_A 28 KADGAILVDFWAEWCGPCKMIAPILDEIADEYQG-KLTVAKLNIDQNP 74 (222)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCT
T ss_pred hcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcC-CcEEEEEECCCCH
Confidence 3456788888999999999999999999998864 3899999998754
No 186
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=97.83 E-value=3.2e-05 Score=63.65 Aligned_cols=67 Identities=9% Similarity=0.020 Sum_probs=47.2
Q ss_pred CCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCceeEEecCChH
Q 027245 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYADPNHS 164 (226)
Q Consensus 96 ~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~pfpll~Dp~~~ 164 (226)
.++.+|++|++.||++|+...+.+.+..+++.+ .+.++.|.++....+.+-..-.++|.-++. +++.
T Consensus 113 ~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~-~~G~ 179 (210)
T 3apq_A 113 SGELWFVNFYSPGCSHCHDLAPTWREFAKEVDG-LLRIGAVNCGDDRMLCRMKGVNSYPSLFIF-RSGM 179 (210)
T ss_dssp HSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBT-TBEEEEEETTTCHHHHHHTTCCSSSEEEEE-CTTS
T ss_pred cCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcC-ceEEEEEECCccHHHHHHcCCCcCCeEEEE-ECCC
Confidence 456788889999999999999999999888854 499999998875433222222244533444 5544
No 187
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=97.82 E-value=3.2e-05 Score=67.85 Aligned_cols=70 Identities=10% Similarity=0.101 Sum_probs=49.2
Q ss_pred CCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcC---CceeEEecCChHHHH
Q 027245 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTK---FKGEVYADPNHSSYE 167 (226)
Q Consensus 96 ~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~---~pfpll~Dp~~~ly~ 167 (226)
.++.+||.|++.||++|+..++.+.+..+++.+ .+.++.|.++..+ -...+++++ +|--++.++...++.
T Consensus 34 ~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~-~~~~~~v~~d~~~-~~~l~~~~~I~~~Pt~~~~~~g~~v~~ 106 (298)
T 3ed3_A 34 TNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDG-VVQVAAVNCDLNK-NKALCAKYDVNGFPTLMVFRPPKIDLS 106 (298)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTSTT-THHHHHHTTCCBSSEEEEEECCCC---
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHccC-CcEEEEEEccCcc-CHHHHHhCCCCccceEEEEECCceeec
Confidence 356788889999999999999999999998865 3899999998421 233455555 444456666554433
No 188
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=97.77 E-value=1.2e-05 Score=55.75 Aligned_cols=51 Identities=8% Similarity=0.051 Sum_probs=39.2
Q ss_pred EEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCC
Q 027245 99 AVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF 153 (226)
Q Consensus 99 vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~ 153 (226)
+.|+.|++.|||+|++..+.|.+..+++. .++.++.|..+... +.++++++
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~~vd~~~~~---~~~~~~~v 53 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFG-DKIDVEKIDIMVDR---EKAIEYGL 53 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHC-SSCCEEEECTTTCG---GGGGGTCS
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhc-CCeEEEEEECCCCH---HHHHhCCc
Confidence 35778899999999999999999888775 36899999887543 24445554
No 189
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=97.76 E-value=5.8e-05 Score=71.58 Aligned_cols=66 Identities=8% Similarity=-0.029 Sum_probs=50.1
Q ss_pred CCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHH--cCCEEEEEeCCCHHHHHHHHHHcC---CceeEEecC
Q 027245 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA--SGVALVLIGPGSVEQARTFSEQTK---FKGEVYADP 161 (226)
Q Consensus 95 ~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~--~Gv~lVaIs~~~~~~i~~f~~~~~---~pfpll~Dp 161 (226)
+.++.+||.|++.||++|+.+++.+.+..+++++ .++.++.|.++.. ...+.+++++ +|--++.|+
T Consensus 28 ~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d-~~~~l~~~~~V~~~PTl~~f~~ 98 (519)
T 3t58_A 28 GSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEE-TNSAVCREFNIAGFPTVRFFQA 98 (519)
T ss_dssp SCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSG-GGHHHHHHTTCCSBSEEEEECT
T ss_pred hCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCcc-ccHHHHHHcCCcccCEEEEEcC
Confidence 3457899999999999999999999999999876 4799999999752 2234455555 444466665
No 190
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=97.73 E-value=5.8e-05 Score=62.03 Aligned_cols=46 Identities=7% Similarity=-0.041 Sum_probs=38.9
Q ss_pred CCeEEEEEecCCCChhHHHHHHHHHHhHHHHHH---cCCEEEEEeCCCH
Q 027245 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA---SGVALVLIGPGSV 141 (226)
Q Consensus 96 ~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~---~Gv~lVaIs~~~~ 141 (226)
+++++|+.|++.||++|++..+.+.+..+++.+ .++.++.|..+..
T Consensus 133 ~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~~ 181 (226)
T 1a8l_A 133 DQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIEY 181 (226)
T ss_dssp CSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGGC
T ss_pred CCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEcccC
Confidence 456768889999999999999999999988874 4788888888754
No 191
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=97.71 E-value=4.4e-05 Score=62.56 Aligned_cols=70 Identities=10% Similarity=0.181 Sum_probs=48.0
Q ss_pred CCeEEEEEecCCCChhHHHHHHHH---HHhHHHHHHcCCEEEEEeCCCH-HHHHHHH-------HHcCCceeEEecCChH
Q 027245 96 DRKAVVAFARHFGCVLCRKRADYL---AAKKDVMDASGVALVLIGPGSV-EQARTFS-------EQTKFKGEVYADPNHS 164 (226)
Q Consensus 96 ~~~vVVvF~R~~~Cp~C~~el~~L---~~~~~~l~~~Gv~lVaIs~~~~-~~i~~f~-------~~~~~pfpll~Dp~~~ 164 (226)
.++.|++.|++.||+.|+...++. .+..+.+. .++.+|-|..+.. +-.+.|. ...++|.-++.|++++
T Consensus 38 ~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~-~~fv~ikVD~de~~~l~~~y~~~~q~~~gv~g~Pt~v~l~~dG~ 116 (173)
T 3ira_A 38 ENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMN-EAFVSIKVDREERPDIDNIYMTVCQIILGRGGWPLNIIMTPGKK 116 (173)
T ss_dssp HTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHH-HHCEEEEEETTTCHHHHHHHHHHHHHHHSCCCSSEEEEECTTSC
T ss_pred hCCCEEEecccchhHhhccccccccCCHHHHHHHH-hcCceeeeCCcccCcHHHHHHHHHHHHcCCCCCcceeeECCCCC
Confidence 356788888999999999866632 22333343 3678888888754 3344453 3467999999999987
Q ss_pred HH
Q 027245 165 SY 166 (226)
Q Consensus 165 ly 166 (226)
+.
T Consensus 117 ~v 118 (173)
T 3ira_A 117 PF 118 (173)
T ss_dssp EE
T ss_pred ce
Confidence 53
No 192
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=97.68 E-value=8.5e-06 Score=61.00 Aligned_cols=43 Identities=19% Similarity=0.188 Sum_probs=36.7
Q ss_pred CeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCH
Q 027245 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (226)
Q Consensus 97 ~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~ 141 (226)
++.+|++|++.||+.|++..+.|.+..+++. ++.++.|..+..
T Consensus 36 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~~~ 78 (130)
T 1wmj_A 36 GKVVIIDFTASWCGPCRFIAPVFAEYAKKFP--GAVFLKVDVDEL 78 (130)
T ss_dssp TCBCBEECCSSSCSCSSSSHHHHHHHHHHCT--TBCCEECCTTTS
T ss_pred CCEEEEEEECCCChhHHHHHHHHHHHHHHCC--CCEEEEEeccch
Confidence 5677888889999999999999999888775 788898888764
No 193
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=97.65 E-value=8.9e-05 Score=69.72 Aligned_cols=65 Identities=12% Similarity=0.114 Sum_probs=47.1
Q ss_pred eEEEEEecCCCChhHHHHHHHHHHhHHHHHHc-C------CEEEEEeCCCHHHHHHHHHHcCCceeEEecCC
Q 027245 98 KAVVAFARHFGCVLCRKRADYLAAKKDVMDAS-G------VALVLIGPGSVEQARTFSEQTKFKGEVYADPN 162 (226)
Q Consensus 98 ~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~-G------v~lVaIs~~~~~~i~~f~~~~~~pfpll~Dp~ 162 (226)
+++||.|++.||++|+...+.+.+..+++.+. | +.++.|.++....+.+-..-.++|--++.++.
T Consensus 43 k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~~la~~y~V~~~PTlilf~~g 114 (470)
T 3qcp_A 43 CPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEVDLCRKYDINFVPRLFFFYPR 114 (470)
T ss_dssp SCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCHHHHHHTTCCSSCEEEEEEES
T ss_pred CeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCHHHHHHcCCCccCeEEEEECC
Confidence 57888999999999999999999999988643 3 89999999875433222222345544555544
No 194
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=97.58 E-value=2.6e-05 Score=56.97 Aligned_cols=47 Identities=15% Similarity=0.107 Sum_probs=38.3
Q ss_pred CCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHc--CCEEEEEeCCCH
Q 027245 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDAS--GVALVLIGPGSV 141 (226)
Q Consensus 95 ~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~--Gv~lVaIs~~~~ 141 (226)
+.++.+|++|++.||+.|++..+.+.+..+++.+. ++.++.|..+..
T Consensus 22 ~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~ 70 (120)
T 1mek_A 22 AAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEE 70 (120)
T ss_dssp HHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTC
T ss_pred ccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCC
Confidence 34567888899999999999999999999888754 577777877653
No 195
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=97.58 E-value=1.8e-05 Score=54.79 Aligned_cols=43 Identities=14% Similarity=0.136 Sum_probs=36.2
Q ss_pred eEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCH
Q 027245 98 KAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (226)
Q Consensus 98 ~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~ 141 (226)
.+.|++|++.|||+|++..+.|.+..+++. .++.++.|..++.
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~~vd~~~~ 45 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMP-DAVEVEYINVMEN 45 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCS-SSEEEEEEESSSS
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcC-CceEEEEEECCCC
Confidence 367888899999999999999999888775 4689999988754
No 196
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.57 E-value=0.0001 Score=56.63 Aligned_cols=42 Identities=14% Similarity=0.008 Sum_probs=36.3
Q ss_pred eEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCH
Q 027245 98 KAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (226)
Q Consensus 98 ~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~ 141 (226)
+.+|+.|++.||++|+...+.|.++.+++ .++.++.|..+..
T Consensus 31 ~~vvv~f~a~wC~~C~~~~p~l~~la~~~--~~v~~~~vd~~~~ 72 (135)
T 2dbc_A 31 LWVVIHLYRSSVPMCLVVNQHLSVLARKF--PETKFVKAIVNSC 72 (135)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHC--SSEEEEEECCSSS
T ss_pred CEEEEEEECCCChHHHHHHHHHHHHHHHC--CCcEEEEEEhhcC
Confidence 57889999999999999999999988876 3688888888764
No 197
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=97.55 E-value=9.1e-05 Score=68.67 Aligned_cols=58 Identities=12% Similarity=0.119 Sum_probs=47.4
Q ss_pred ccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCC
Q 027245 93 LWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF 153 (226)
Q Consensus 93 l~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~ 153 (226)
+++.++.+||.|++.||++|+...+.+.+..+++...++.++.|.++.... .++++++
T Consensus 27 ~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~~~~---l~~~~~v 84 (504)
T 2b5e_A 27 YIQSHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTENQD---LCMEHNI 84 (504)
T ss_dssp HHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTTCHH---HHHHTTC
T ss_pred HHhcCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECCCCHH---HHHhcCC
Confidence 344567889999999999999999999999999887789999999987643 4455554
No 198
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=97.54 E-value=0.00017 Score=49.04 Aligned_cols=36 Identities=11% Similarity=0.088 Sum_probs=28.1
Q ss_pred EEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEe
Q 027245 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG 137 (226)
Q Consensus 101 VvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs 137 (226)
.+.|++.||++|++..+.|.+..+++. ..+.++.|.
T Consensus 3 ~v~f~a~wC~~C~~~~~~l~~~~~~~~-~~~~~~~v~ 38 (77)
T 1ilo_A 3 KIQIYGTGCANCQMLEKNAREAVKELG-IDAEFEKIK 38 (77)
T ss_dssp EEEEECSSSSTTHHHHHHHHHHHHHTT-CCEEEEEEC
T ss_pred EEEEEcCCChhHHHHHHHHHHHHHHcC-CceEEEEec
Confidence 466778999999999999998887764 246666665
No 199
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=97.51 E-value=3.6e-05 Score=61.58 Aligned_cols=76 Identities=9% Similarity=0.149 Sum_probs=46.1
Q ss_pred CeEEEEEecCCCChhHHHHHHHHHHhHH--HHHHcCCEEEEEeCCCHHHHHHHHHHcCCceeEEecCChHH-HHHcCCcc
Q 027245 97 RKAVVAFARHFGCVLCRKRADYLAAKKD--VMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYADPNHSS-YEALSFVS 173 (226)
Q Consensus 97 ~~vVVvF~R~~~Cp~C~~el~~L~~~~~--~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~pfpll~Dp~~~l-y~alGv~~ 173 (226)
++.|+|.|++.||++|+...+.+.+..+ ++.+.++..|-|..+..+....| .-.++|--++.|+++++ ++..|...
T Consensus 44 ~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~~fv~V~vD~e~~~~~~~~-~v~~~PT~~f~~~~G~~v~~~~G~~~ 122 (151)
T 3ph9_A 44 KKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQNKFIMLNLMHETTDKNLSP-DGQYVPRIMFVDPSLTVRADIAGRYS 122 (151)
T ss_dssp TCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHHHTCEEEEESSCCSCGGGCT-TCCCSSEEEEECTTSCBCTTCCCSCT
T ss_pred CCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhhcCeEEEEecCCchhhHhhc-CCCCCCEEEEECCCCCEEEEEeCCcC
Confidence 5667888889999999999998887522 22233455555542322222222 22457777889977654 44445533
No 200
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=97.49 E-value=0.00011 Score=61.18 Aligned_cols=86 Identities=14% Similarity=0.124 Sum_probs=53.2
Q ss_pred EeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCC-----CHH--H-------------HHHH
Q 027245 88 IPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-----SVE--Q-------------ARTF 147 (226)
Q Consensus 88 v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~-----~~~--~-------------i~~f 147 (226)
+.+++. +.+++|+.|+.+|||+|++..+.|.+..+ .+++++.+... +.. . ...+
T Consensus 79 ~~~g~~--~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~----~~v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~ 152 (216)
T 1eej_A 79 IVYKAP--QEKHVITVFTDITCGYCHKLHEQMADYNA----LGITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDV 152 (216)
T ss_dssp EEECCT--TCCEEEEEEECTTCHHHHHHHTTHHHHHH----TTEEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHH
T ss_pred eeecCC--CCCEEEEEEECCCCHHHHHHHHHHHHHHh----CCcEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHH
Confidence 444442 45788888999999999999999887654 37888766431 111 1 1111
Q ss_pred HHHcCCce---eEEecCChHHHHHcCCccccceee
Q 027245 148 SEQTKFKG---EVYADPNHSSYEALSFVSGVLVTF 179 (226)
Q Consensus 148 ~~~~~~pf---pll~Dp~~~ly~alGv~~~~~~t~ 179 (226)
....++++ ....|.+..+.+.||+..++...+
T Consensus 153 ~~~~~~~~~~~~~~v~~~~~l~~~~gV~gtPt~v~ 187 (216)
T 1eej_A 153 MAGKSVAPASCDVDIADHYALGVQLGVSGTPAVVL 187 (216)
T ss_dssp HTTCCCCCCCCSCCHHHHHHHHHHHTCCSSSEEEC
T ss_pred HhCCCCChhHHHHHHHHHHHHHHHcCCCccCEEEE
Confidence 22223322 234566778888899876665533
No 201
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=97.49 E-value=0.00016 Score=58.51 Aligned_cols=43 Identities=14% Similarity=0.080 Sum_probs=35.1
Q ss_pred CCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCC
Q 027245 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (226)
Q Consensus 96 ~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~ 139 (226)
+++++|+.|+.+|||+|++..+.|.+..+++.+ .+.++-+...
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~~~~ 66 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQ-DVVLKQVPIA 66 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCT-TEEEEEEECC
T ss_pred CCCeEEEEEECCCCccHHHhhHHHHHHHHHCCC-CeEEEEEecc
Confidence 457888888999999999999999888887755 6777777664
No 202
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=97.46 E-value=8.5e-05 Score=60.49 Aligned_cols=100 Identities=15% Similarity=0.098 Sum_probs=61.5
Q ss_pred CCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCc-ee---EEecCChHHHHHcCC
Q 027245 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK-GE---VYADPNHSSYEALSF 171 (226)
Q Consensus 96 ~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~p-fp---ll~Dp~~~ly~alGv 171 (226)
..++|||.||+.||++|+...|-|.++.+++.+ .+.++-|..|...+ +++++++. .| ++.|-+. +.-.+|-
T Consensus 40 ~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~-~v~f~kVDVDe~~e---~a~~y~V~siPT~~fFk~G~~-v~vd~Gt 114 (160)
T 2av4_A 40 DERLVCIRFGHDYDPDCMKMDELLYKVADDIKN-FCVIYLVDITEVPD---FNTMYELYDPVSVMFFYRNKH-MMIDLGT 114 (160)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTT-TEEEEEEETTTCCT---TTTTTTCCSSEEEEEEETTEE-EEEECSS
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHccC-CcEEEEEECCCCHH---HHHHcCCCCCCEEEEEECCEE-EEEecCC
Confidence 346899999999999999999999999998743 37888888886433 45555543 22 3433222 1101221
Q ss_pred c-cccceeecc--hhhHHHHHHHHhhhccccc
Q 027245 172 V-SGVLVTFTP--KAGLKIIQSYMEGYRQDWK 200 (226)
Q Consensus 172 ~-~~~~~t~~p--~a~~~~~~~~~~G~r~~w~ 200 (226)
. +.-.....| ..+.+.+..+.+|.+++..
T Consensus 115 gd~~k~vGa~~~k~~l~~~ie~~~r~a~~g~~ 146 (160)
T 2av4_A 115 GNNNKINWPMNNKQEFIDIVETIFRGARKGRG 146 (160)
T ss_dssp SCCSCBCSCCCCHHHHHHHHHHHHHHHHTTCS
T ss_pred CCcCeEEeecCCHHHHHHHHHHHHHHhhcCCe
Confidence 1 011112222 3566677777788776654
No 203
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=97.43 E-value=0.0002 Score=59.03 Aligned_cols=50 Identities=12% Similarity=0.130 Sum_probs=41.1
Q ss_pred cCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcC--CEEEEEeCCCHHH
Q 027245 94 WKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASG--VALVLIGPGSVEQ 143 (226)
Q Consensus 94 ~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~G--v~lVaIs~~~~~~ 143 (226)
...++.+|++|++.||++|+...+.+.+..+++.+.+ +.++.|..+....
T Consensus 144 ~~~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~~~~ 195 (241)
T 3idv_A 144 VNDADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAETD 195 (241)
T ss_dssp HHHCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTTCHH
T ss_pred hccCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCCCHH
Confidence 3345688889999999999999999999999887654 8899998876543
No 204
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=97.41 E-value=0.00032 Score=59.55 Aligned_cols=47 Identities=4% Similarity=-0.135 Sum_probs=39.3
Q ss_pred CCeEEEEEecCCCChhHHHHHHHHHHhHHHHHH---cCCEEEEEeCCCHH
Q 027245 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA---SGVALVLIGPGSVE 142 (226)
Q Consensus 96 ~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~---~Gv~lVaIs~~~~~ 142 (226)
+++++|+.|++.|||+|++.++.|.+...++.+ .++.+..|..+...
T Consensus 137 ~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~~~ 186 (243)
T 2hls_A 137 KGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYENP 186 (243)
T ss_dssp CSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTTCH
T ss_pred CCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECccCH
Confidence 357888889999999999999999999888742 57888889887543
No 205
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=97.40 E-value=4.9e-05 Score=56.73 Aligned_cols=30 Identities=13% Similarity=0.266 Sum_probs=25.0
Q ss_pred eEEEEEecCCCChhHHHHHHHHHHhHHHHH
Q 027245 98 KAVVAFARHFGCVLCRKRADYLAAKKDVMD 127 (226)
Q Consensus 98 ~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~ 127 (226)
+.+|+.|++.|||+|+...+.|.+..+++.
T Consensus 13 k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~ 42 (106)
T 3kp8_A 13 QIGGTMYGAYWCPHCQDQKELFGAAFDQVP 42 (106)
T ss_dssp HHTCEEEECTTCHHHHHHHHHHGGGGGGSC
T ss_pred CCEEEEEECCCCHHHHHHHHHHHHHHHhCC
Confidence 456778899999999999999998876553
No 206
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=97.39 E-value=6.6e-05 Score=59.04 Aligned_cols=70 Identities=9% Similarity=0.012 Sum_probs=37.9
Q ss_pred CCCccCCCeEEEEEecCCC--ChhHHHHHHHHHHhHHHHHHcCCE--EEEEeCCCHHHHHHHHHHcC---CceeEEecCC
Q 027245 90 ISDLWKDRKAVVAFARHFG--CVLCRKRADYLAAKKDVMDASGVA--LVLIGPGSVEQARTFSEQTK---FKGEVYADPN 162 (226)
Q Consensus 90 Lsdl~~~~~vVVvF~R~~~--Cp~C~~el~~L~~~~~~l~~~Gv~--lVaIs~~~~~~i~~f~~~~~---~pfpll~Dp~ 162 (226)
|.+++...+.+|++|++.| |++|+..++.|.+..+++ .++. ++.|..+.... .+++++ +|--++. .+
T Consensus 27 f~~~i~~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~--~~v~~~~~~Vd~d~~~~---la~~~~V~~iPT~~~f-k~ 100 (142)
T 2es7_A 27 VDDWIKRVGDGVILLSSDPRRTPEVSDNPVMIAELLREF--PQFDWQVAVADLEQSEA---IGDRFNVRRFPATLVF-TD 100 (142)
T ss_dssp -------CCSEEEEECCCSCC----CCHHHHHHHHHHTC--TTSCCEEEEECHHHHHH---HHHTTTCCSSSEEEEE-SC
T ss_pred HHHHHHhCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh--cccceeEEEEECCCCHH---HHHhcCCCcCCeEEEE-eC
Confidence 3343433334556677766 999999999999999888 3577 88888765433 344444 4544555 55
Q ss_pred hHH
Q 027245 163 HSS 165 (226)
Q Consensus 163 ~~l 165 (226)
++.
T Consensus 101 G~~ 103 (142)
T 2es7_A 101 GKL 103 (142)
T ss_dssp C--
T ss_pred CEE
Confidence 543
No 207
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=97.34 E-value=0.00033 Score=57.74 Aligned_cols=53 Identities=13% Similarity=0.048 Sum_probs=41.1
Q ss_pred CCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCC
Q 027245 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF 153 (226)
Q Consensus 96 ~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~ 153 (226)
+++++|+.|++.||++|++..+.+.+...++ .++.++.|..+.... .++++++
T Consensus 135 ~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~--~~v~~~~vd~~~~~~---l~~~~~v 187 (229)
T 2ywm_A 135 DIPIEIWVFVTTSCGYCPSAAVMAWDFALAN--DYITSKVIDASENQD---LAEQFQV 187 (229)
T ss_dssp CSCEEEEEEECTTCTTHHHHHHHHHHHHHHC--TTEEEEEEEGGGCHH---HHHHTTC
T ss_pred CCCeEEEEEECCCCcchHHHHHHHHHHHHHC--CCeEEEEEECCCCHH---HHHHcCC
Confidence 4577788899999999999999999988877 378888888875433 3444454
No 208
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=97.30 E-value=0.00013 Score=67.12 Aligned_cols=67 Identities=10% Similarity=0.163 Sum_probs=47.8
Q ss_pred CeEEEEEecCCCChhHHHHHHHHHHhHHHHHHc-CCEEEEEeCCCHHHHHHHHHHcCCceeEEecCChH
Q 027245 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDAS-GVALVLIGPGSVEQARTFSEQTKFKGEVYADPNHS 164 (226)
Q Consensus 97 ~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~-Gv~lVaIs~~~~~~i~~f~~~~~~pfpll~Dp~~~ 164 (226)
++.|||+||+.||++|+..++.+.++.+++++. ++.++.|..+..+..+.| .-.++|--++.+.++.
T Consensus 370 ~k~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~~v~~~~id~~~~~~~~~~-~v~~~Pt~~~~~~~~~ 437 (481)
T 3f8u_A 370 NKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATANDVPSPY-EVRGFPTIYFSPANKK 437 (481)
T ss_dssp TCEEEEEEECTTBHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTSSCCCTTC-CCCSSSEEEEECTTCT
T ss_pred CCcEEEEEecCcChhHHHhhHHHHHHHHHhccCCCEEEEEEECCchhhHhhC-CCcccCEEEEEeCCCe
Confidence 578899999999999999999999999998765 688888887764211112 1224554456665544
No 209
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=97.23 E-value=0.0004 Score=56.01 Aligned_cols=42 Identities=19% Similarity=0.231 Sum_probs=33.3
Q ss_pred CCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeC
Q 027245 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP 138 (226)
Q Consensus 96 ~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~ 138 (226)
+.+++|+.|+.+|||+|+...+.|.+..+++.+ .+.++-+..
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~ 65 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPA-DVHFVRLPA 65 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCT-TEEEEEEEC
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCC-CeEEEEEeh
Confidence 467889999999999999999999888777654 566654443
No 210
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=97.23 E-value=0.00052 Score=61.60 Aligned_cols=57 Identities=7% Similarity=0.106 Sum_probs=44.6
Q ss_pred CCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHH-----cCCEEEEEeCCCHHHHHHHHHHcCCc
Q 027245 95 KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA-----SGVALVLIGPGSVEQARTFSEQTKFK 154 (226)
Q Consensus 95 ~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~-----~Gv~lVaIs~~~~~~i~~f~~~~~~p 154 (226)
++++.+||.|++.||++|+..++.+.+..+++++ .++.++.|.++... ..++++++.
T Consensus 20 ~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~---~l~~~~~v~ 81 (382)
T 2r2j_A 20 NNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHS---DIAQRYRIS 81 (382)
T ss_dssp HHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTCH---HHHHHTTCC
T ss_pred hcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCccH---HHHHhcCCC
Confidence 3456888899999999999999999999998863 34889999988653 345556653
No 211
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=97.23 E-value=0.00016 Score=64.02 Aligned_cols=50 Identities=8% Similarity=0.140 Sum_probs=40.2
Q ss_pred ccCCCeEEEEEecCCCChhHHHHHHH-------HHHhHHHHHHcCCEEEEEeCCCHHH
Q 027245 93 LWKDRKAVVAFARHFGCVLCRKRADY-------LAAKKDVMDASGVALVLIGPGSVEQ 143 (226)
Q Consensus 93 l~~~~~vVVvF~R~~~Cp~C~~el~~-------L~~~~~~l~~~Gv~lVaIs~~~~~~ 143 (226)
.+..++.+||.|++.||+ |+..+|. +.+..+++++.++.++.|.++....
T Consensus 24 ~i~~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~~~~ 80 (350)
T 1sji_A 24 VLKKYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKKEAK 80 (350)
T ss_dssp HHTTCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTTTHH
T ss_pred HHhhCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCCCHH
Confidence 344567889999999999 9888888 7777777777789999999987543
No 212
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=97.10 E-value=9.3e-05 Score=56.01 Aligned_cols=46 Identities=15% Similarity=0.104 Sum_probs=33.7
Q ss_pred CCCeEEEEEecCCCCh--------------hHHHHHHHHHHhHHHHHHcCCEEEEEeCCCH
Q 027245 95 KDRKAVVAFARHFGCV--------------LCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (226)
Q Consensus 95 ~~~~vVVvF~R~~~Cp--------------~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~ 141 (226)
+.++.+|+.|++.||+ +|+...+.+.+..+++.+ .+.++.|..+..
T Consensus 19 ~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~-~~~~~~vd~d~~ 78 (123)
T 1oaz_A 19 KADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQG-KLTVAKLNIDQN 78 (123)
T ss_dssp SCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC--------CEEEEEETTSC
T ss_pred hCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcC-CeEEEEEECCCC
Confidence 3456788888999999 999999999998888764 589999988764
No 213
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=97.10 E-value=0.00033 Score=53.78 Aligned_cols=59 Identities=10% Similarity=0.052 Sum_probs=41.8
Q ss_pred ccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHH-HHHHHHcCCc
Q 027245 93 LWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQA-RTFSEQTKFK 154 (226)
Q Consensus 93 l~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i-~~f~~~~~~p 154 (226)
+++..+.+|+||.++||++|+.-.+.+.+..++ .++.++-|..+....+ .+.++++++.
T Consensus 20 ii~~~~~vvi~khatwCgpc~~~~~~~e~~~~~---~~v~~~~vdVde~r~~Sn~IA~~~~V~ 79 (112)
T 3iv4_A 20 VIEENKYVFVLKHSETCPISANAYDQFNKFLYE---RDMDGYYLIVQQERDLSDYIAKKTNVK 79 (112)
T ss_dssp HHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHH---HTCCEEEEEGGGGHHHHHHHHHHHTCC
T ss_pred HHhcCCCEEEEEECCcCHhHHHHHHHHHHHhcc---CCceEEEEEeecCchhhHHHHHHhCCc
Confidence 333457899999999999999999999988763 4677777776654332 3344555544
No 214
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=97.09 E-value=0.00071 Score=59.65 Aligned_cols=47 Identities=13% Similarity=0.164 Sum_probs=38.9
Q ss_pred CCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHc-CCEEEEEeCCCHH
Q 027245 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDAS-GVALVLIGPGSVE 142 (226)
Q Consensus 96 ~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~-Gv~lVaIs~~~~~ 142 (226)
.++.+++.|++.||++|++.++.+.++.+++++. ++.++.|.++...
T Consensus 266 ~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~~~ 313 (361)
T 3uem_A 266 EKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANE 313 (361)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTTCB
T ss_pred CCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECCccc
Confidence 4578888999999999999999999999988764 5777777776543
No 215
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=97.08 E-value=0.00049 Score=63.17 Aligned_cols=52 Identities=10% Similarity=-0.027 Sum_probs=43.1
Q ss_pred eEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCC
Q 027245 98 KAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF 153 (226)
Q Consensus 98 ~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~ 153 (226)
+.+||.|++.||++|+...+.+.+..+++++. +.++.|.++.... .++++++
T Consensus 22 ~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~-v~~~~vd~~~~~~---l~~~~~v 73 (481)
T 3f8u_A 22 GLMLVEFFAPWCGHAKRLAPEYEAAATRLKGI-VPLAKVDCTANTN---TCNKYGV 73 (481)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CCEEEEETTTCHH---HHHHTTC
T ss_pred CeEEEEEECCCCHHHHHhHHHHHHHHHHhcCc-eEEEEEECCCCHH---HHHhcCC
Confidence 78899999999999999999999999988765 8899999887543 4455554
No 216
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=97.08 E-value=0.0002 Score=57.68 Aligned_cols=42 Identities=17% Similarity=0.070 Sum_probs=32.5
Q ss_pred CCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeC
Q 027245 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP 138 (226)
Q Consensus 96 ~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~ 138 (226)
+.++.|+.|+.++||+|....+.|.+..+++.. .+.+..+..
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~ 62 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPS-DAYLRTEHV 62 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCT-TEEEEEEEC
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHCCC-ceEEEEecc
Confidence 357788888999999999999999887776643 566665553
No 217
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=97.07 E-value=0.00041 Score=59.70 Aligned_cols=42 Identities=14% Similarity=0.053 Sum_probs=36.7
Q ss_pred CeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCC
Q 027245 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (226)
Q Consensus 97 ~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~ 140 (226)
++.|||.|++.||++|+...+.|.++..++. ++.++.|..+.
T Consensus 133 ~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~--~v~f~kVd~d~ 174 (245)
T 1a0r_P 133 ITTIVVHIYEDGIKGCDALNSSLICLAAEYP--MVKFCKIKASN 174 (245)
T ss_dssp TCEEEEEEECTTSTTHHHHHHHHHHHHHHCT--TSEEEEEEHHH
T ss_pred CCEEEEEEECCCChHHHHHHHHHHHHHHHCC--CCEEEEEeCCc
Confidence 5688999999999999999999999988874 58999888754
No 218
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=97.02 E-value=0.0012 Score=64.45 Aligned_cols=65 Identities=8% Similarity=-0.079 Sum_probs=46.9
Q ss_pred CCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCceeEEecC
Q 027245 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYADP 161 (226)
Q Consensus 96 ~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~pfpll~Dp 161 (226)
.++.+++.|++.||++|+++++.|.+..++++. .+.++.|.++....+.+...-.++|--++.+.
T Consensus 454 ~~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~~-~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~ 518 (780)
T 3apo_A 454 DKEPWLVDFFAPWSPPSRALLPELRKASTLLYG-QLKVGTLDCTIHEGLCNMYNIQAYPTTVVFNQ 518 (780)
T ss_dssp CCSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHHTTCCSSSEEEEEET
T ss_pred CCCeEEEEEECCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEeCCCCHHHHHHcCCCcCCeEEEEcC
Confidence 345678888999999999999999999998864 69999999887554433222333454444443
No 219
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=97.00 E-value=0.0013 Score=64.04 Aligned_cols=63 Identities=6% Similarity=-0.154 Sum_probs=45.2
Q ss_pred CCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCceeEEe
Q 027245 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYA 159 (226)
Q Consensus 96 ~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~pfpll~ 159 (226)
.++.+|+.|++.||++|++.++.+.+..++++. ++.++.|.++....+.+-..-.++|--++.
T Consensus 674 ~~~~v~v~F~a~wC~~C~~~~p~~~~la~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~ 736 (780)
T 3apo_A 674 GKTHWVVDFYAPWSGPSQNFAPEFELLARMIKG-KVRAGKVDCQAYPQTCQKAGIKAYPSVKLY 736 (780)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CceEEEEECCCCHHHHHhcCCCcCCEEEEE
Confidence 456678888899999999999999999888864 689999998765443222222345544444
No 220
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=96.95 E-value=0.0012 Score=52.96 Aligned_cols=41 Identities=20% Similarity=0.166 Sum_probs=31.6
Q ss_pred CeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeC
Q 027245 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP 138 (226)
Q Consensus 97 ~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~ 138 (226)
.++.|+.|..++||+|....+.|.+..+++.. .+.++.+..
T Consensus 25 a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~ 65 (193)
T 2rem_A 25 GKIEVVEIFGYTCPHCAHFDSKLQAWGARQAK-DVRFTLVPA 65 (193)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHTSCT-TEEEEEEEC
T ss_pred CCeEEEEEECCCChhHhhhhHHHHHHHHhcCC-ceEEEEeCc
Confidence 46788888999999999999999887776643 566655543
No 221
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=96.88 E-value=0.0033 Score=49.67 Aligned_cols=50 Identities=14% Similarity=0.065 Sum_probs=38.0
Q ss_pred eEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHc-CCEEEEEeC
Q 027245 87 AIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDAS-GVALVLIGP 138 (226)
Q Consensus 87 ~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~-Gv~lVaIs~ 138 (226)
.+.+++. +.|+.|+.|..++||+|....+.+.+..+++.+. .|+++.+..
T Consensus 19 ~~~~G~~--~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~~~v~~~~~~~ 69 (175)
T 1z6m_A 19 GLHIGES--NAPVKMIEFINVRCPYCRKWFEESEELLAQSVKSGKVERIIKLF 69 (175)
T ss_dssp SEEESCT--TCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHTTSEEEEEEEC
T ss_pred CcccCCC--CCCeEEEEEECCCCcchHHHHHHHHHHHHHHhhCCcEEEEEEeC
Confidence 3556653 5688888999999999999999998887777443 477776544
No 222
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=96.87 E-value=0.0013 Score=50.06 Aligned_cols=41 Identities=12% Similarity=-0.009 Sum_probs=35.8
Q ss_pred EEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCH
Q 027245 99 AVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV 141 (226)
Q Consensus 99 vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~ 141 (226)
.||+.|++.||++|+.-.+.|.++.+++. ++.++-|..+..
T Consensus 25 ~vvv~F~a~wc~~C~~~~p~l~~la~~~~--~v~f~kvd~d~~ 65 (118)
T 3evi_A 25 WVIIHLYRSSIPMCLLVNQHLSLLARKFP--ETKFVKAIVNSC 65 (118)
T ss_dssp EEEEEEECTTSHHHHHHHHHHHHHHHHCT--TSEEEEEEGGGT
T ss_pred eEEEEEeCCCChHHHHHHHHHHHHHHHCC--CCEEEEEEhHHh
Confidence 78889999999999999999999988774 589999988763
No 223
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=96.87 E-value=0.00096 Score=49.03 Aligned_cols=57 Identities=14% Similarity=0.039 Sum_probs=33.8
Q ss_pred cCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCH-H-HHHHHHHHcCC-ceeE
Q 027245 94 WKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV-E-QARTFSEQTKF-KGEV 157 (226)
Q Consensus 94 ~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~-~-~i~~f~~~~~~-pfpl 157 (226)
.++++ |++ |++.|||+|++..+.|.+...+ +.++-|..+.. + ....+++++++ .+|.
T Consensus 17 ~~~~~-vv~-f~a~~C~~C~~~~~~l~~~~~~-----~~~v~v~~~~~~~~~~~~l~~~~~v~~~Pt 76 (116)
T 2e7p_A 17 ASSAP-VVV-FSKTYCGYCNRVKQLLTQVGAS-----YKVVELDELSDGSQLQSALAHWTGRGTVPN 76 (116)
T ss_dssp HTSSS-EEE-EECTTCHHHHHHHHHHHHHTCC-----CEEEEGGGSTTHHHHHHHHHHHHSCCSSCE
T ss_pred HcCCC-EEE-EECCCChhHHHHHHHHHHcCCC-----eEEEEccCCCChHHHHHHHHHHhCCCCcCE
Confidence 33444 444 8999999999998887775332 34555554442 1 22345555565 3553
No 224
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=96.82 E-value=0.003 Score=49.94 Aligned_cols=47 Identities=15% Similarity=0.033 Sum_probs=38.4
Q ss_pred CeEEEEEecCCCC--hhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHH
Q 027245 97 RKAVVAFARHFGC--VLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQA 144 (226)
Q Consensus 97 ~~vVVvF~R~~~C--p~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i 144 (226)
+..|||+||+.|| ++|+.-.|-|.++.+++.. .++++-|..|....+
T Consensus 33 ~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~-~v~~~KVdvDe~~~l 81 (137)
T 2qsi_A 33 GKIVVLFFRGDAVRFPEAADLAVVLPELINAFPG-RLVAAEVAAEAERGL 81 (137)
T ss_dssp SSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTT-TEEEEEECGGGHHHH
T ss_pred CCcEEEEEeCCccCCCchhhHHhHHHHHHHHccC-CcEEEEEECCCCHHH
Confidence 3379999999999 9999999999999998853 578888887765433
No 225
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=96.81 E-value=0.00085 Score=53.29 Aligned_cols=52 Identities=4% Similarity=-0.102 Sum_probs=38.6
Q ss_pred EEEEEecCCC--ChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCC
Q 027245 99 AVVAFARHFG--CVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF 153 (226)
Q Consensus 99 vVVvF~R~~~--Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~ 153 (226)
.||||||+.| |++|+.-.+-|.++.+++....++++-|..|... +.+.++++
T Consensus 36 ~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvDe~~---~lA~~ygV 89 (140)
T 2qgv_A 36 DGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQSE---AIGDRFGA 89 (140)
T ss_dssp SEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHHHHH---HHHHHHTC
T ss_pred CEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECCCCH---HHHHHcCC
Confidence 3556999999 9999999999999999886433788877776543 34445553
No 226
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=96.79 E-value=0.0035 Score=43.09 Aligned_cols=53 Identities=17% Similarity=0.264 Sum_probs=34.9
Q ss_pred EEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCC-ceeEEec
Q 027245 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF-KGEVYAD 160 (226)
Q Consensus 101 VvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~-pfpll~D 160 (226)
|+.|...|||+|++..+.|. +.|+.+..|..+......++.++++. ..|.+.+
T Consensus 3 v~~f~~~~C~~C~~~~~~l~-------~~~i~~~~vdi~~~~~~~~~~~~~g~~~vP~~~~ 56 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAME-------NRGFDFEMINVDRVPEAAEALRAQGFRQLPVVIA 56 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHH-------HTTCCCEEEETTTCHHHHHHHHHTTCCSSCEEEE
T ss_pred EEEEcCCCChhHHHHHHHHH-------HCCCCeEEEECCCCHHHHHHHHHhCCCccCEEEE
Confidence 45678999999998666554 45788888888754344444444554 3665544
No 227
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=96.79 E-value=0.0048 Score=50.67 Aligned_cols=47 Identities=19% Similarity=0.247 Sum_probs=36.5
Q ss_pred eEEEEEecC-------CCChhHHHHHHHHHHhHHHHHH----cCCEEEEEeCCCHHHH
Q 027245 98 KAVVAFARH-------FGCVLCRKRADYLAAKKDVMDA----SGVALVLIGPGSVEQA 144 (226)
Q Consensus 98 ~vVVvF~R~-------~~Cp~C~~el~~L~~~~~~l~~----~Gv~lVaIs~~~~~~i 144 (226)
..|||+||+ .||++|+...+.+.+..+++.. ..+.++-|..+....+
T Consensus 38 ~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~~~~l 95 (178)
T 3ga4_A 38 YFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNEVPQL 95 (178)
T ss_dssp CEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTTCHHH
T ss_pred CcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECccCHHH
Confidence 467888888 5999999999999999888862 3477777777764433
No 228
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=96.73 E-value=0.0017 Score=60.06 Aligned_cols=45 Identities=18% Similarity=0.208 Sum_probs=36.5
Q ss_pred CCeEEEEEecCCCChhHHHHHHHHHHhHHHHHH--cCCEEEEEeCCC
Q 027245 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDA--SGVALVLIGPGS 140 (226)
Q Consensus 96 ~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~--~Gv~lVaIs~~~ 140 (226)
.++.+||.|++.||++|+..++.+.++.+++.. .++.++.|.++.
T Consensus 375 ~~k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~ 421 (504)
T 2b5e_A 375 PKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTE 421 (504)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEGGG
T ss_pred CCCCEEEEEECCCChhHHHHhHHHHHHHHHhhccCCcEEEEEecCCc
Confidence 356788888999999999999999999988873 367777777654
No 229
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=96.65 E-value=0.0012 Score=55.46 Aligned_cols=40 Identities=15% Similarity=0.057 Sum_probs=35.2
Q ss_pred eEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCC
Q 027245 98 KAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (226)
Q Consensus 98 ~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~ 139 (226)
+.|||.|++.||++|+...+.|.++.+++. ++.++.|.++
T Consensus 121 k~vvV~F~a~wC~~C~~l~p~l~~la~~~~--~v~f~~vd~~ 160 (217)
T 2trc_P 121 TTIVVNIYEDGVRGCDALNSSLECLAAEYP--MVKFCKIRAS 160 (217)
T ss_dssp CEEEEEEECTTSTTHHHHHHHHHHHHTTCT--TSEEEEEEHH
T ss_pred cEEEEEEECCCCccHHHHHHHHHHHHHHCC--CeEEEEEECC
Confidence 678888899999999999999999888773 7899999886
No 230
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=96.64 E-value=0.0056 Score=41.11 Aligned_cols=53 Identities=17% Similarity=0.297 Sum_probs=36.4
Q ss_pred EEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCC-ceeEEec
Q 027245 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF-KGEVYAD 160 (226)
Q Consensus 101 VvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~-pfpll~D 160 (226)
|+.|...|||+|++..+.|. +.|+.+..|..+......++.++++. ..|.+.+
T Consensus 3 i~~y~~~~C~~C~~~~~~l~-------~~~i~~~~~di~~~~~~~~~~~~~~~~~vP~l~~ 56 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALD-------RAGLAYNTVDISLDDEARDYVMALGYVQAPVVEV 56 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHH-------HTTCCCEEEETTTCHHHHHHHHHTTCBCCCEEEE
T ss_pred EEEEeCCCChHHHHHHHHHH-------HcCCCcEEEECCCCHHHHHHHHHcCCCccCEEEE
Confidence 45678999999998766655 34777777887764444444456664 4776665
No 231
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=96.62 E-value=0.0016 Score=45.11 Aligned_cols=56 Identities=7% Similarity=0.091 Sum_probs=38.8
Q ss_pred EEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHH-HHHHHHHHcC---CceeEE
Q 027245 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE-QARTFSEQTK---FKGEVY 158 (226)
Q Consensus 101 VvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~-~i~~f~~~~~---~pfpll 158 (226)
|+.|...|||+|++..+.|.+...+. .++.+..|..+... ..++++++++ ..+|.+
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~--~~i~~~~vdi~~~~~~~~~l~~~~~~~~~~vP~i 62 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNER--DDFQYQYVDIRAEGITKEDLQQKAGKPVETVPQI 62 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHH--SSCEEEEECHHHHTCCSHHHHHHTCCCSCCSCEE
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcC--CCceEEEEecccChHHHHHHHHHhCCCCceeCeE
Confidence 55678999999999988888876643 57888888765421 2234566666 456744
No 232
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=96.54 E-value=0.0027 Score=43.96 Aligned_cols=55 Identities=18% Similarity=0.234 Sum_probs=33.1
Q ss_pred EEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCC-ceeEE
Q 027245 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF-KGEVY 158 (226)
Q Consensus 101 VvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~-pfpll 158 (226)
+++|++.|||+|+...+.|.+..+ +.|+.+..+..+......+.++++++ ..|.+
T Consensus 4 ~~~f~~~~C~~C~~~~~~l~~~~~---~~~~~~~~~~v~~~~~~~~~~~~~gv~~vPt~ 59 (80)
T 2k8s_A 4 KAIFYHAGCPVCVSAEQAVANAID---PSKYTVEIVHLGTDKARIAEAEKAGVKSVPAL 59 (80)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHSC---TTTEEEEEEETTTCSSTHHHHHHHTCCEEEEE
T ss_pred eEEEeCCCCCchHHHHHHHHHHHH---hcCCeEEEEEecCChhhHHHHHHcCCCcCCEE
Confidence 456679999999998888876543 45666656655531111223345565 36633
No 233
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=96.51 E-value=0.0061 Score=49.68 Aligned_cols=55 Identities=5% Similarity=0.176 Sum_probs=40.8
Q ss_pred CCeEEEEEecCC-CChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCC
Q 027245 96 DRKAVVAFARHF-GCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF 153 (226)
Q Consensus 96 ~~~vVVvF~R~~-~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~ 153 (226)
.++++|++|++. ||++|++..+.|.+..+. ...+.++.|.++.++. ...++++++
T Consensus 21 ~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~--~~~v~~~~vd~~~~~~-~~~~~~~~v 76 (226)
T 1a8l_A 21 VNPVKLIVFVRKDHCQYCDQLKQLVQELSEL--TDKLSYEIVDFDTPEG-KELAKRYRI 76 (226)
T ss_dssp CSCEEEEEEECSSSCTTHHHHHHHHHHHHTT--CTTEEEEEEETTSHHH-HHHHHHTTC
T ss_pred CCCeEEEEEecCCCCchhHHHHHHHHHHHhh--CCceEEEEEeCCCccc-HHHHHHcCC
Confidence 457888999999 999999999988886643 2468899999987322 344555554
No 234
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=96.49 E-value=0.0025 Score=52.75 Aligned_cols=37 Identities=19% Similarity=0.337 Sum_probs=29.1
Q ss_pred CCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEE
Q 027245 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLI 136 (226)
Q Consensus 96 ~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaI 136 (226)
+.+++|+.|+.+|||+|++..+.|.+.. +.|++++.+
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~----~~~v~v~~~ 121 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYN----DLGITVRYL 121 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHH----HTTEEEEEE
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHH----hCCcEEEEE
Confidence 4578888889999999999999887743 347887755
No 235
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=96.47 E-value=0.004 Score=47.01 Aligned_cols=53 Identities=17% Similarity=0.139 Sum_probs=38.3
Q ss_pred EEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCC-HHHHHHHHHHcCCceeEE
Q 027245 99 AVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS-VEQARTFSEQTKFKGEVY 158 (226)
Q Consensus 99 vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~-~~~i~~f~~~~~~pfpll 158 (226)
..|+.|+..|||+|+.-.+.|.+..++ .|+.+.-|..+. ++. ++++++..|.+
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l~~e---~~i~~~~vDId~d~~l----~~~ygv~VP~l 83 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVLQKK---SWFELEVINIDGNEHL----TRLYNDRVPVL 83 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHH---SCCCCEEEETTTCHHH----HHHSTTSCSEE
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHh---cCCeEEEEECCCCHHH----HHHhCCCCceE
Confidence 357778899999999988888877654 468888888874 443 33456667755
No 236
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=96.46 E-value=0.0024 Score=46.77 Aligned_cols=55 Identities=24% Similarity=0.310 Sum_probs=35.7
Q ss_pred eEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCceeEE
Q 027245 98 KAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVY 158 (226)
Q Consensus 98 ~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~pfpll 158 (226)
..+|++|...|||+|+.-.+.|.+.. .++.+.-|..++.+ ..+++++++...|++
T Consensus 16 ~~~v~~f~~~~C~~C~~~~~~L~~l~-----~~i~~~~vdi~~~~-~~el~~~~g~~vP~l 70 (100)
T 1wjk_A 16 LPVLTLFTKAPCPLCDEAKEVLQPYK-----DRFILQEVDITLPE-NSTWYERYKFDIPVF 70 (100)
T ss_dssp CCEEEEEECSSCHHHHHHHHHTSTTS-----SSSEEEEEETTSST-THHHHHHSSSSCSEE
T ss_pred CCEEEEEeCCCCcchHHHHHHHHHhh-----hCCeEEEEECCCcc-hHHHHHHHCCCCCEE
Confidence 34566678999999998776665432 34888888887322 144555555455644
No 237
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=96.31 E-value=0.0084 Score=49.14 Aligned_cols=56 Identities=7% Similarity=0.004 Sum_probs=41.8
Q ss_pred CCeEEEEEe----cCCCChhHHHHHHHHHHhHHHHHH-cCCEEEEEeCCCHHHHHHHHHHcCCc
Q 027245 96 DRKAVVAFA----RHFGCVLCRKRADYLAAKKDVMDA-SGVALVLIGPGSVEQARTFSEQTKFK 154 (226)
Q Consensus 96 ~~~vVVvF~----R~~~Cp~C~~el~~L~~~~~~l~~-~Gv~lVaIs~~~~~~i~~f~~~~~~p 154 (226)
.++++|+|| |..||+.|+..++.+.+..+++.+ ..+.++.|.++... +.++++++.
T Consensus 20 ~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~~~~---~l~~~~~v~ 80 (229)
T 2ywm_A 20 KEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPFTHK---EETEKYGVD 80 (229)
T ss_dssp CSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTTTCH---HHHHHTTCC
T ss_pred cCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCcccH---HHHHHcCCC
Confidence 468888888 688999999999999998777743 45888888877543 344555543
No 238
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=96.25 E-value=0.0083 Score=53.59 Aligned_cols=50 Identities=12% Similarity=0.049 Sum_probs=36.6
Q ss_pred CCCeEEEEEecCCCChhHHHHH------HHHHHhHHHHHHcCCEEEEEeCCCHHHH
Q 027245 95 KDRKAVVAFARHFGCVLCRKRA------DYLAAKKDVMDASGVALVLIGPGSVEQA 144 (226)
Q Consensus 95 ~~~~vVVvF~R~~~Cp~C~~el------~~L~~~~~~l~~~Gv~lVaIs~~~~~~i 144 (226)
+..+.+||.|++.||++|...- +.+.+..++++..++.++.|.++....+
T Consensus 28 ~~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~~~~l 83 (367)
T 3us3_A 28 KKYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKDAAV 83 (367)
T ss_dssp HHCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTTTHHH
T ss_pred hhCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCcccHHH
Confidence 3457888999999999984322 3566677777666899999999875443
No 239
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=95.90 E-value=0.009 Score=43.04 Aligned_cols=50 Identities=12% Similarity=0.175 Sum_probs=30.8
Q ss_pred EEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCceeEEe
Q 027245 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYA 159 (226)
Q Consensus 101 VvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~pfpll~ 159 (226)
|+.|++.||++|+.-.+.|.+...++ ..-|..+...+ .++++++..|.+.
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~------~~~vdid~~~~---l~~~~g~~vPtl~ 52 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA------FFSVFIDDDAA---LESAYGLRVPVLR 52 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC------EEEEECTTCHH---HHHHHTTTCSEEE
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh------eEEEECCCCHH---HHHHhCCCcCeEE
Confidence 56788999999998776665543221 45566664322 3334466677554
No 240
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=95.77 E-value=0.04 Score=43.81 Aligned_cols=90 Identities=12% Similarity=0.087 Sum_probs=57.0
Q ss_pred CeEEEEEecCCCChhHHHHHHHHH---HhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcC---CceeEEecCC-hHHHHHc
Q 027245 97 RKAVVAFARHFGCVLCRKRADYLA---AKKDVMDASGVALVLIGPGSVEQARTFSEQTK---FKGEVYADPN-HSSYEAL 169 (226)
Q Consensus 97 ~~vVVvF~R~~~Cp~C~~el~~L~---~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~---~pfpll~Dp~-~~ly~al 169 (226)
++.|+|.|.+.||+.|++--.+.- +..+.+ +.+..+|-|..++.+ ..++.++++ +|+-++.|++ +.....+
T Consensus 42 ~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l-~~~fv~v~~d~~~~~-~~~l~~~y~v~~~P~~~fld~~~G~~l~~~ 119 (153)
T 2dlx_A 42 NKWLMINIQNVQDFACQCLNRDVWSNEAVKNII-REHFIFWQVYHDSEE-GQRYIQFYKLGDFPYVSILDPRTGQKLVEW 119 (153)
T ss_dssp TCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHH-HHTEEEEEEESSSHH-HHHHHHHHTCCSSSEEEEECTTTCCCCEEE
T ss_pred CCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHH-HcCeEEEEEecCCHh-HHHHHHHcCCCCCCEEEEEeCCCCcEeeec
Confidence 567888889999999998655442 223333 347888888887753 445566554 6777889998 5432221
Q ss_pred CCccccceeecchhhHHHHHHHHhhh
Q 027245 170 SFVSGVLVTFTPKAGLKIIQSYMEGY 195 (226)
Q Consensus 170 Gv~~~~~~t~~p~a~~~~~~~~~~G~ 195 (226)
.. ..+......+..++..+
T Consensus 120 ------~g-~~~~~fl~~L~~~l~~~ 138 (153)
T 2dlx_A 120 ------HQ-LDVSSFLDQVTGFLGEH 138 (153)
T ss_dssp ------SS-CCHHHHHHHHHHHHHHT
T ss_pred ------CC-CCHHHHHHHHHHHHHhc
Confidence 11 45666666666665544
No 241
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=95.49 E-value=0.046 Score=38.23 Aligned_cols=52 Identities=13% Similarity=0.185 Sum_probs=35.4
Q ss_pred EEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHc-CC-ceeEEec
Q 027245 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQT-KF-KGEVYAD 160 (226)
Q Consensus 101 VvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~-~~-pfpll~D 160 (226)
|++|...|||+|++-.+.|. +.|+....|..+ .+..+++.+.+ +. .+|.+..
T Consensus 8 v~~y~~~~C~~C~~~~~~L~-------~~~i~~~~vdv~-~~~~~~l~~~~~~~~~vP~l~~ 61 (89)
T 2klx_A 8 IILYTRPNCPYCKRARDLLD-------KKGVKYTDIDAS-TSLRQEMVQRANGRNTFPQIFI 61 (89)
T ss_dssp EEEESCSCCTTTHHHHHHHH-------HHTCCEEEECSC-HHHHHHHHHHHHSSCCSCEEEE
T ss_pred EEEEECCCChhHHHHHHHHH-------HcCCCcEEEECC-HHHHHHHHHHhCCCCCcCEEEE
Confidence 55678999999997655544 456777778777 55566677766 54 4665543
No 242
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=95.23 E-value=0.017 Score=41.63 Aligned_cols=54 Identities=17% Similarity=0.089 Sum_probs=29.5
Q ss_pred EEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCC----HHHHHHHHHHcCC-ceeEE
Q 027245 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS----VEQARTFSEQTKF-KGEVY 158 (226)
Q Consensus 101 VvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~----~~~i~~f~~~~~~-pfpll 158 (226)
|++|...|||+|++-.+.|.+...+.. + +..|..+. ++..+.+.+.++. .+|.+
T Consensus 14 v~~f~~~~C~~C~~~~~~L~~~~~~~~--~--~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~i 72 (105)
T 1kte_A 14 VVVFIKPTCPFCRKTQELLSQLPFKEG--L--LEFVDITATSDTNEIQDYLQQLTGARTVPRV 72 (105)
T ss_dssp EEEEECSSCHHHHHHHHHHHHSCBCTT--S--EEEEEGGGSTTHHHHHHHHHHHHSCCCSCEE
T ss_pred EEEEEcCCCHhHHHHHHHHHHcCCCCC--c--cEEEEccCCCCHHHHHHHHHHHhCCCCcCeE
Confidence 344678999999987666654322211 1 44454443 2333445556664 35643
No 243
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=95.18 E-value=0.01 Score=45.45 Aligned_cols=43 Identities=12% Similarity=0.254 Sum_probs=30.0
Q ss_pred eEEEEEecCCCChhHHHHHHHHHHhHHHHH-HcCCEEEEEeCCC
Q 027245 98 KAVVAFARHFGCVLCRKRADYLAAKKDVMD-ASGVALVLIGPGS 140 (226)
Q Consensus 98 ~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~-~~Gv~lVaIs~~~ 140 (226)
..+||.|++.||++|+.--+.+...++.-. ...+.|+-|..+.
T Consensus 19 ~~~LV~F~A~wC~~Ck~~~~~i~~~~~~~a~~~~~~l~~vdv~~ 62 (116)
T 3dml_A 19 ELRLLMFEQPGCLYCARWDAEIAPQYPLTDEGRAAPVQRLQMRD 62 (116)
T ss_dssp CEEEEEEECTTCHHHHHHHHHTTTTGGGSHHHHHSCEEEEETTS
T ss_pred CCEEEEEECCCCHHHHHHHHHHHhhHHHhhhcccceEEEEECCC
Confidence 578888999999999987776665544321 2236677777665
No 244
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=95.14 E-value=0.032 Score=52.11 Aligned_cols=44 Identities=11% Similarity=0.104 Sum_probs=36.3
Q ss_pred CeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHH
Q 027245 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVE 142 (226)
Q Consensus 97 ~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~ 142 (226)
++..|.+|+..|||+|+...+.|.+...++. ++.+..|..+...
T Consensus 117 ~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~--~v~~~~vd~~~~~ 160 (521)
T 1hyu_A 117 GDFEFETYYSLSCHNCPDVVQALNLMAVLNP--RIKHTAIDGGTFQ 160 (521)
T ss_dssp SCEEEEEEECTTCSSHHHHHHHHHHHHHHCT--TEEEEEEETTTCH
T ss_pred CCcceEEEECCCCcCcHHHHHHHHHHHhHcC--ceEEEEEechhhH
Confidence 5678999999999999999999998876653 7888888877543
No 245
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=95.12 E-value=0.059 Score=36.59 Aligned_cols=53 Identities=11% Similarity=0.153 Sum_probs=33.1
Q ss_pred EEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCC-HHHHHHHHHHcCC-ceeEEec
Q 027245 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS-VEQARTFSEQTKF-KGEVYAD 160 (226)
Q Consensus 101 VvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~-~~~i~~f~~~~~~-pfpll~D 160 (226)
|+.|...|||.|++-...|.+ .|+.+..|..+. ++..+++.+.++. .+|.+.+
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~-------~~i~~~~~~i~~~~~~~~~~~~~~~~~~vP~l~~ 57 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSS-------KGVSFQELPIDGNAAKREEMIKRSGRTTVPQIFI 57 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHH-------HTCCCEEEECTTCSHHHHHHHHHHSSCCSCEEEE
T ss_pred EEEEECCCChhHHHHHHHHHH-------CCCCcEEEECCCCHHHHHHHHHHhCCCCcCEEEE
Confidence 345678999999976655543 466666666654 3445566666664 3665544
No 246
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=95.05 E-value=0.024 Score=45.97 Aligned_cols=42 Identities=14% Similarity=0.059 Sum_probs=32.7
Q ss_pred CCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeC
Q 027245 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP 138 (226)
Q Consensus 96 ~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~ 138 (226)
..+++|+.|..+|||+|+...+.|.+..+++.+ .+.+.-+..
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~-~v~~~~~p~ 64 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKD-DMYLRTEHV 64 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCT-TEEEEEEEC
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHCCC-CeEEEEecC
Confidence 357888889999999999999999888776655 465555544
No 247
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=95.05 E-value=0.038 Score=41.99 Aligned_cols=66 Identities=15% Similarity=0.159 Sum_probs=52.6
Q ss_pred EEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCC----CHHHHHHHHHHcCCceeEEecCChHHHHHcCCcc
Q 027245 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG----SVEQARTFSEQTKFKGEVYADPNHSSYEALSFVS 173 (226)
Q Consensus 101 VvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~----~~~~i~~f~~~~~~pfpll~Dp~~~ly~alGv~~ 173 (226)
|.+|-..+|+.|++-... |++.|+....|... +.++++++.+..+.+..-+.+.....|+.+++..
T Consensus 2 i~iY~~~~C~~c~ka~~~-------L~~~gi~~~~~di~~~~~~~~el~~~l~~~~~~~~~l~n~~~~~~k~l~~~~ 71 (120)
T 3l78_A 2 VTLFLSPSCTSCRKARAW-------LNRHDVVFQEHNIMTSPLSRDELLKILSYTENGTEDIISTRSKVFQKLDIDV 71 (120)
T ss_dssp EEEEECSSCHHHHHHHHH-------HHHTTCCEEEEETTTSCCCHHHHHHHHHHCSSTHHHHBCTTCHHHHHTTCCG
T ss_pred EEEEeCCCCHHHHHHHHH-------HHHcCCCeEEEecccCCCcHHHHHHHHhhcCCCHHHhhcCCcHHHHHcCCCc
Confidence 567889999999975444 45678777666653 4589999999999988878889999999999763
No 248
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=94.98 E-value=0.041 Score=41.28 Aligned_cols=50 Identities=8% Similarity=0.122 Sum_probs=30.0
Q ss_pred EEEecCCCChhHHHH-HHHHHHhHHHHHHcC---CEEEEEeCCCH----HHHHHHHHHcCC-ceeE
Q 027245 101 VAFARHFGCVLCRKR-ADYLAAKKDVMDASG---VALVLIGPGSV----EQARTFSEQTKF-KGEV 157 (226)
Q Consensus 101 VvF~R~~~Cp~C~~e-l~~L~~~~~~l~~~G---v~lVaIs~~~~----~~i~~f~~~~~~-pfpl 157 (226)
|++|...|||+|++- .+. |++.| +....|..+.. +..+...+.++. .+|.
T Consensus 27 Vvvf~~~~Cp~C~~alk~~-------L~~~~~~~i~~~~vdid~~~~~~~~~~~l~~~~g~~tvP~ 85 (118)
T 3c1r_A 27 IFVASKTYCPYCHAALNTL-------FEKLKVPRSKVLVLQLNDMKEGADIQAALYEINGQRTVPN 85 (118)
T ss_dssp EEEEECSSCHHHHHHHHHH-------HTTSCCCGGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCE
T ss_pred EEEEEcCCCcCHHHHHHHH-------HHHcCCCCCCeEEEECccCCChHHHHHHHHHHhCCCCcCE
Confidence 444778999999975 333 34455 66666666532 234455556665 4563
No 249
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=94.91 E-value=0.045 Score=46.06 Aligned_cols=47 Identities=15% Similarity=0.045 Sum_probs=33.8
Q ss_pred CeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEe
Q 027245 86 NAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG 137 (226)
Q Consensus 86 ~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs 137 (226)
..+.++.- +.+++|+.|..+|||+|++..+.|.+..++ .+|+++.+.
T Consensus 88 ~~i~~G~~--~ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~---g~v~v~~~~ 134 (241)
T 1v58_A 88 HWLLDGKK--DAPVIVYVFADPFCPYCKQFWQQARPWVDS---GKVQLRTLL 134 (241)
T ss_dssp CCEEESCT--TCSEEEEEEECTTCHHHHHHHHHHHHHHHT---TSEEEEEEE
T ss_pred CCceECCC--CCCeEEEEEECCCChhHHHHHHHHHHHHhC---CcEEEEEEE
Confidence 34555542 457888899999999999999998775543 357766543
No 250
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=94.88 E-value=0.041 Score=40.71 Aligned_cols=51 Identities=18% Similarity=0.221 Sum_probs=30.8
Q ss_pred EEEecCCCChhHHHHHHHHHHhHHHHHHcCCE---EEEEeCCCH----HHHHHHHHHcCC-ceeEE
Q 027245 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVA---LVLIGPGSV----EQARTFSEQTKF-KGEVY 158 (226)
Q Consensus 101 VvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~---lVaIs~~~~----~~i~~f~~~~~~-pfpll 158 (226)
|++|...|||+|++-.+.|. +.|+. +..|..+.. +..+.+.+.++. .+|.+
T Consensus 21 vv~f~~~~Cp~C~~~~~~L~-------~~~~~~~~~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~v 79 (114)
T 2hze_A 21 VTIFVKYTCPFCRNALDILN-------KFSFKRGAYEIVDIKEFKPENELRDYFEQITGGKTVPRI 79 (114)
T ss_dssp EEEEECTTCHHHHHHHHHHT-------TSCBCTTSEEEEEGGGSSSHHHHHHHHHHHHSCCSSCEE
T ss_pred EEEEEeCCChhHHHHHHHHH-------HcCCCcCceEEEEccCCCChHHHHHHHHHHhCCCCcCEE
Confidence 44567899999997665554 44555 666665432 333456666665 35643
No 251
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=94.83 E-value=0.093 Score=38.54 Aligned_cols=58 Identities=14% Similarity=0.179 Sum_probs=36.7
Q ss_pred ccCCCeEEEEEecC----CCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCC-HHHHHHHHHHcCCc-eeEE
Q 027245 93 LWKDRKAVVAFARH----FGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS-VEQARTFSEQTKFK-GEVY 158 (226)
Q Consensus 93 l~~~~~vVVvF~R~----~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~-~~~i~~f~~~~~~p-fpll 158 (226)
+....+ |++|..+ .|||+|++-...| ++.|+....|..+. ++..+.+.+.++.+ +|.+
T Consensus 11 ~i~~~~-vvvy~~g~~~~~~Cp~C~~ak~~L-------~~~~i~~~~vdi~~~~~~~~~l~~~~g~~~vP~i 74 (109)
T 1wik_A 11 LTNKAS-VMLFMKGNKQEAKCGFSKQILEIL-------NSTGVEYETFDILEDEEVRQGLKTFSNWPTYPQL 74 (109)
T ss_dssp HHTTSS-EEEEESSTTTCCCSSTHHHHHHHH-------HHTCSCEEEEESSSCHHHHHHHHHHHSCCSSCEE
T ss_pred HhccCC-EEEEEecCCCCCCCchHHHHHHHH-------HHcCCCeEEEECCCCHHHHHHHHHHhCCCCCCEE
Confidence 334445 5566665 8999999755554 45578888888865 44445566666643 6643
No 252
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=94.76 E-value=0.1 Score=36.48 Aligned_cols=53 Identities=19% Similarity=0.198 Sum_probs=34.0
Q ss_pred EEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCC-HHHHHHHHHHcCC-ceeEEec
Q 027245 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS-VEQARTFSEQTKF-KGEVYAD 160 (226)
Q Consensus 101 VvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~-~~~i~~f~~~~~~-pfpll~D 160 (226)
|+.|...|||.|++-...|. +.|+....|..+. ++..+++.+.++. ..|.+.+
T Consensus 8 v~ly~~~~C~~C~~~~~~L~-------~~~i~~~~~di~~~~~~~~~l~~~~~~~~vP~l~~ 62 (92)
T 2khp_A 8 VIIYTRPGCPYCARAKALLA-------RKGAEFNEIDASATPELRAEMQERSGRNTFPQIFI 62 (92)
T ss_dssp EEEEECTTCHHHHHHHHHHH-------HTTCCCEEEESTTSHHHHHHHHHHHTSSCCCEEEE
T ss_pred EEEEECCCChhHHHHHHHHH-------HcCCCcEEEECCCCHHHHHHHHHHhCCCCcCEEEE
Confidence 45567899999997555444 4567777777764 4445566666653 3565443
No 253
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=94.74 E-value=0.073 Score=38.74 Aligned_cols=56 Identities=13% Similarity=0.188 Sum_probs=33.0
Q ss_pred CCCeEEEEEec----CCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCC-HHHHHHHHHHcCC-ceeEE
Q 027245 95 KDRKAVVAFAR----HFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS-VEQARTFSEQTKF-KGEVY 158 (226)
Q Consensus 95 ~~~~vVVvF~R----~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~-~~~i~~f~~~~~~-pfpll 158 (226)
+..+ |++|+. +.|||+|++-.+.|. +.|+....|..+. ++..+.+.+.++. .+|.+
T Consensus 15 ~~~~-vvvf~~g~~~~~~C~~C~~~~~~L~-------~~~i~~~~vdi~~~~~~~~~l~~~~g~~~vP~v 76 (105)
T 2yan_A 15 NKAS-VMLFMKGNKQEAKCGFSKQILEILN-------STGVEYETFDILEDEEVRQGLKAYSNWPTYPQL 76 (105)
T ss_dssp TSSS-EEEEESBCSSSBCTTHHHHHHHHHH-------HHTCCCEEEEGGGCHHHHHHHHHHHTCCSSCEE
T ss_pred ccCC-EEEEEecCCCCCCCccHHHHHHHHH-------HCCCCeEEEECCCCHHHHHHHHHHHCCCCCCeE
Confidence 3445 455655 389999997555554 3466666666654 3444455555664 36643
No 254
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=94.64 E-value=0.1 Score=35.83 Aligned_cols=53 Identities=11% Similarity=0.040 Sum_probs=32.6
Q ss_pred EEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCH---HHHHHHHHHcCC------ceeEEec
Q 027245 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV---EQARTFSEQTKF------KGEVYAD 160 (226)
Q Consensus 101 VvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~---~~i~~f~~~~~~------pfpll~D 160 (226)
|++|...|||+|++-...| ++.|+..-.+..+.. ...+++.+.++. ..|.+..
T Consensus 6 v~ly~~~~Cp~C~~~~~~L-------~~~~i~~~~~~vd~~~~~~~~~el~~~~g~~~~~~~~vP~i~i 67 (89)
T 3msz_A 6 VKIYTRNGCPYCVWAKQWF-------EENNIAFDETIIDDYAQRSKFYDEMNQSGKVIFPISTVPQIFI 67 (89)
T ss_dssp EEEEECTTCHHHHHHHHHH-------HHTTCCCEEEECCSHHHHHHHHHHHHTTTCCSSCCCSSCEEEE
T ss_pred EEEEEcCCChhHHHHHHHH-------HHcCCCceEEEeecCCChhHHHHHHHHhCCCCCCCCccCEEEE
Confidence 6677889999999754444 445654444444432 234567777776 5775554
No 255
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=94.60 E-value=0.13 Score=36.03 Aligned_cols=52 Identities=8% Similarity=-0.029 Sum_probs=34.1
Q ss_pred EEEecCC----CChhHHHHHHHHHHhHHHHHHcCCEEEEEeCC------CHHHHHHHHHHcCCc------eeEEe
Q 027245 101 VAFARHF----GCVLCRKRADYLAAKKDVMDASGVALVLIGPG------SVEQARTFSEQTKFK------GEVYA 159 (226)
Q Consensus 101 VvF~R~~----~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~------~~~~i~~f~~~~~~p------fpll~ 159 (226)
|+.|... +||+|.+-... |++.|+..-.|..+ +++..+++.+.++.. +|.+.
T Consensus 2 v~iY~~~~~~~~Cp~C~~ak~~-------L~~~gi~y~~idI~~~~~~~~~~~~~~l~~~~g~~~~~~~tvP~v~ 69 (87)
T 1aba_A 2 FKVYGYDSNIHKCGPCDNAKRL-------LTVKKQPFEFINIMPEKGVFDDEKIAELLTKLGRDTQIGLTMPQVF 69 (87)
T ss_dssp EEEEECCTTTSCCHHHHHHHHH-------HHHTTCCEEEEESCSBTTBCCHHHHHHHHHHHTCSCCTTCCSCEEE
T ss_pred EEEEEeCCCCCcCccHHHHHHH-------HHHcCCCEEEEEeeccccccCHHHHHHHHHHhCCCCCCCCccCEEE
Confidence 3445678 99999864443 44567777777766 345556677777765 78544
No 256
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=94.34 E-value=0.084 Score=38.71 Aligned_cols=50 Identities=14% Similarity=0.139 Sum_probs=28.0
Q ss_pred EEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCC----HHHHHH-HHHHcCC-ceeE
Q 027245 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS----VEQART-FSEQTKF-KGEV 157 (226)
Q Consensus 101 VvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~----~~~i~~-f~~~~~~-pfpl 157 (226)
|+.|...|||+|++-.+.|.+ .|+....|..+. ...+++ +.+.++. .+|.
T Consensus 21 v~vy~~~~Cp~C~~~~~~L~~-------~~i~~~~~di~~~~~~~~~~~~~l~~~~g~~tvP~ 76 (113)
T 3rhb_A 21 VVIYSKTWCSYCTEVKTLFKR-------LGVQPLVVELDQLGPQGPQLQKVLERLTGQHTVPN 76 (113)
T ss_dssp EEEEECTTCHHHHHHHHHHHH-------TTCCCEEEEGGGSTTHHHHHHHHHHHHHSCCSSCE
T ss_pred EEEEECCCChhHHHHHHHHHH-------cCCCCeEEEeecCCCChHHHHHHHHHHhCCCCcCE
Confidence 445778999999976555543 455544444432 234444 4444454 3663
No 257
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=94.28 E-value=0.1 Score=45.62 Aligned_cols=55 Identities=5% Similarity=0.063 Sum_probs=40.8
Q ss_pred CeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCC
Q 027245 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF 153 (226)
Q Consensus 97 ~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~ 153 (226)
.+.++++|...||+.|++.++.+.+..++++.. +.++.|.++..+ ....++.+++
T Consensus 135 ~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~-i~f~~vd~~~~~-~~~~~~~fgi 189 (361)
T 3uem_A 135 IKTHILLFLPKSVSDYDGKLSNFKTAAESFKGK-ILFIFIDSDHTD-NQRILEFFGL 189 (361)
T ss_dssp CCEEEEEECCSSSSSHHHHHHHHHHHHGGGTTT-CEEEEECTTSGG-GHHHHHHTTC
T ss_pred CCcEEEEEEeCCchhHHHHHHHHHHHHHHccCc-eEEEEecCChHH-HHHHHHHcCC
Confidence 356677888999999999999999999998754 888888887321 2233444554
No 258
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=94.14 E-value=0.082 Score=40.23 Aligned_cols=67 Identities=19% Similarity=0.297 Sum_probs=53.1
Q ss_pred EEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeC--C--CHHHHHHHHHHcCCceeEEecCChHHHHHcCCcc
Q 027245 100 VVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP--G--SVEQARTFSEQTKFKGEVYADPNHSSYEALSFVS 173 (226)
Q Consensus 100 VVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~--~--~~~~i~~f~~~~~~pfpll~Dp~~~ly~alGv~~ 173 (226)
+|.+|...+|+.|++-...| ++.|+..-.|.. + +.++++.+.++.+.+..-+.+.....|+.+++..
T Consensus 4 Mi~iY~~~~C~~c~ka~~~L-------~~~gi~~~~~di~~~~~~~~eL~~~l~~~g~~~~~l~n~~~~~~k~l~l~~ 74 (120)
T 3fz4_A 4 MLTFYEYPKCSTCRRAKAEL-------DDLAWDYDAIDIKKNPPAASLIRNWLENSGLELKKFFNTSGQSYRALGLKD 74 (120)
T ss_dssp SEEEEECSSCHHHHHHHHHH-------HHHTCCEEEEETTTSCCCHHHHHHHHHHSCCCGGGGBCTTSHHHHHTTHHH
T ss_pred eEEEEeCCCChHHHHHHHHH-------HHcCCceEEEEeccCchhHHHHHHHHHHcCCCHHHHhCCCCcchhhcCccc
Confidence 56788899999999755444 567777666654 2 4589999999999988888899999999999853
No 259
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=94.11 E-value=0.053 Score=41.33 Aligned_cols=65 Identities=14% Similarity=0.251 Sum_probs=51.6
Q ss_pred EEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeC--C--CHHHHHHHHHHcCCceeEEecCChHHHHHcCCc
Q 027245 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP--G--SVEQARTFSEQTKFKGEVYADPNHSSYEALSFV 172 (226)
Q Consensus 101 VvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~--~--~~~~i~~f~~~~~~pfpll~Dp~~~ly~alGv~ 172 (226)
|.+|...+|+.|++-...| ++.|+..-.|.. + +.++++.+.++.+++..-+.+.....|+.+|+.
T Consensus 6 i~iY~~p~C~~c~ka~~~L-------~~~gi~~~~~di~~~~~~~~eL~~~l~~~g~~~~~l~n~~~~~~k~l~l~ 74 (120)
T 3gkx_A 6 TLFLQYPACSTCQKAKKWL-------IENNIEYTNRLIVDDNPTVEELKAWIPLSGLPVKKFFNTSGVVYKELKLS 74 (120)
T ss_dssp CEEEECTTCHHHHHHHHHH-------HHTTCCCEEEETTTTCCCHHHHHHHHHHHTSCGGGGBCTTSHHHHHTTHH
T ss_pred EEEEECCCChHHHHHHHHH-------HHcCCceEEEecccCcCCHHHHHHHHHHcCCCHHHeEeCCCchhhhcCcc
Confidence 5678899999999755444 556766655544 3 458999999999999888889999999999975
No 260
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=94.06 E-value=0.036 Score=44.72 Aligned_cols=42 Identities=29% Similarity=0.403 Sum_probs=27.9
Q ss_pred CCeEEEEEecCCCChhHHHHHHHH---HHhHHHHHHcCCEEEEEeCC
Q 027245 96 DRKAVVAFARHFGCVLCRKRADYL---AAKKDVMDASGVALVLIGPG 139 (226)
Q Consensus 96 ~~~vVVvF~R~~~Cp~C~~el~~L---~~~~~~l~~~Gv~lVaIs~~ 139 (226)
.+++||.|+ .+|||+|+...+.+ .+..+++.+ +++++-+...
T Consensus 14 ~~~~vvef~-d~~Cp~C~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~ 58 (189)
T 3l9v_A 14 DAPAVVEFF-SFYCPPCYAFSQTMGVDQAIRHVLPQ-GSRMVKYHVS 58 (189)
T ss_dssp TCCSEEEEE-CTTCHHHHHHHHTSCHHHHHHTTCCT-TCCEEEEECS
T ss_pred CCCEEEEEE-CCCChhHHHHhHhccchHHHHHhCCC-CCEEEEEech
Confidence 346666655 89999999988876 344444433 5777666543
No 261
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=93.98 E-value=0.043 Score=47.06 Aligned_cols=58 Identities=7% Similarity=-0.026 Sum_probs=40.2
Q ss_pred CCCeEEEEEec--CCCChhHHHHHHHHHHhHHHHHH--cCCEEEEEeCCC--HHHHHHHHHHcCCc---ee
Q 027245 95 KDRKAVVAFAR--HFGCVLCRKRADYLAAKKDVMDA--SGVALVLIGPGS--VEQARTFSEQTKFK---GE 156 (226)
Q Consensus 95 ~~~~vVVvF~R--~~~Cp~C~~el~~L~~~~~~l~~--~Gv~lVaIs~~~--~~~i~~f~~~~~~p---fp 156 (226)
...+.|||.|+ +.||+ ..|.+.++.+++.. ..+.+.-|.+++ .+.....++++++. ||
T Consensus 31 ~~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~~~V~~~~~P 97 (248)
T 2c0g_A 31 ERFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDRYKVDDKNFP 97 (248)
T ss_dssp TTSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHHTTCCTTSCC
T ss_pred hcCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHHhCCCcCCCC
Confidence 34456777777 99998 67777777777764 468899999887 11123456677776 66
No 262
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=93.98 E-value=0.086 Score=40.19 Aligned_cols=66 Identities=15% Similarity=0.251 Sum_probs=51.4
Q ss_pred EEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCC----CHHHHHHHHHHcCC-ceeEEecCChHHHHHcCCcc
Q 027245 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG----SVEQARTFSEQTKF-KGEVYADPNHSSYEALSFVS 173 (226)
Q Consensus 101 VvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~----~~~~i~~f~~~~~~-pfpll~Dp~~~ly~alGv~~ 173 (226)
|.+|...+|+.|++-...| ++.|+....|... +.++++.+.+..++ +..=+.+.....|+.+++..
T Consensus 7 i~iY~~p~C~~c~ka~~~L-------~~~gi~~~~~di~~~~~~~~eL~~~l~~~g~~~~~~l~n~~~~~~k~l~l~~ 77 (121)
T 3rdw_A 7 VTIYHNPRCSKSRETLALV-------EQQGITPQVVLYLETPPSVDKLKELLQQLGFSDARQLMRTKEDLYKTLNLDD 77 (121)
T ss_dssp CEEECCTTCHHHHHHHHHH-------HTTTCCCEEECTTTSCCCHHHHHHHHHHTTCSSGGGGBCTTSHHHHHTTTTC
T ss_pred EEEEECCCCHHHHHHHHHH-------HHcCCCcEEEeeccCCCcHHHHHHHHHhcCCcCHHHHhcCCChhhhhcCccc
Confidence 5678899999999755444 5667766666443 45899999999998 76667789999999999874
No 263
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=93.98 E-value=0.13 Score=35.98 Aligned_cols=54 Identities=17% Similarity=0.189 Sum_probs=32.9
Q ss_pred EEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCC--CHH----HHHHHHHHcCC-ceeEEecC
Q 027245 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG--SVE----QARTFSEQTKF-KGEVYADP 161 (226)
Q Consensus 101 VvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~--~~~----~i~~f~~~~~~-pfpll~Dp 161 (226)
|++|...|||+|++-...|.+ .|+..-.|..+ +.+ ...++.+.++. ..|++.+.
T Consensus 14 v~ly~~~~Cp~C~~~~~~L~~-------~gi~~~~~~v~~~~~~~~~~~~~~l~~~~g~~~vP~l~~~ 74 (92)
T 3ic4_A 14 VLMYGLSTCPHCKRTLEFLKR-------EGVDFEVIWIDKLEGEERKKVIEKVHSISGSYSVPVVVKG 74 (92)
T ss_dssp SEEEECTTCHHHHHHHHHHHH-------HTCCCEEEEGGGCCHHHHHHHHHHHHHHHSSSCSCEEEET
T ss_pred EEEEECCCChHHHHHHHHHHH-------cCCCcEEEEeeeCCccchHHHHHHHHHhcCCCCcCEEEEC
Confidence 455778999999986555544 34444444443 332 23677777764 57877663
No 264
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=93.97 E-value=0.03 Score=47.80 Aligned_cols=57 Identities=12% Similarity=0.032 Sum_probs=38.8
Q ss_pred cCCCeEEEEEecC--CCChhHHHHHHHHHHhHHHHHH-cCCEEEEEeCCC--HHHHHHHHHHcCCc
Q 027245 94 WKDRKAVVAFARH--FGCVLCRKRADYLAAKKDVMDA-SGVALVLIGPGS--VEQARTFSEQTKFK 154 (226)
Q Consensus 94 ~~~~~vVVvF~R~--~~Cp~C~~el~~L~~~~~~l~~-~Gv~lVaIs~~~--~~~i~~f~~~~~~p 154 (226)
++..+.+||.|++ .||+ ..|.+.++.+++.. .++.++.|.+++ -......++++++.
T Consensus 19 i~~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~~V~ 80 (240)
T 2qc7_A 19 IPKSKFVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYKLD 80 (240)
T ss_dssp GGGCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHTTCC
T ss_pred HcCCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHcCCC
Confidence 3345677888888 9999 67777777777753 468888998664 22233466676766
No 265
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=93.93 E-value=0.11 Score=39.83 Aligned_cols=65 Identities=15% Similarity=0.250 Sum_probs=50.6
Q ss_pred EEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCC----HHHHHHHHHHcCCceeEEecCChHHHHHcCCc
Q 027245 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS----VEQARTFSEQTKFKGEVYADPNHSSYEALSFV 172 (226)
Q Consensus 101 VvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~----~~~i~~f~~~~~~pfpll~Dp~~~ly~alGv~ 172 (226)
|.+|...+||.|++-...| ++.|+....+.... .++++++.++.+.+..-+.+.....|+.++..
T Consensus 3 i~lY~~~~C~~C~ka~~~L-------~~~gi~y~~~di~~~~~~~~el~~~l~~~~~~~~~l~n~~~~~~k~l~~~ 71 (132)
T 1z3e_A 3 VTLYTSPSCTSCRKARAWL-------EEHEIPFVERNIFSEPLSIDEIKQILRMTEDGTDEIISTRSKVFQKLNVN 71 (132)
T ss_dssp EEEEECTTCHHHHHHHHHH-------HHTTCCEEEEETTTSCCCHHHHHHHHHTCSSCGGGTBCTTSHHHHHHCCC
T ss_pred EEEEeCCCChHHHHHHHHH-------HHcCCceEEEEccCCCccHHHHHHHHHHcCCCHHHhhcCCchHHHhcCcc
Confidence 5677899999999755544 45677766665542 47888999888888887889999999999975
No 266
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=93.91 E-value=0.085 Score=40.08 Aligned_cols=66 Identities=20% Similarity=0.250 Sum_probs=51.8
Q ss_pred EEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeC----CCHHHHHHHHHHcCCc-eeEEecCChHHHHHcCCcc
Q 027245 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP----GSVEQARTFSEQTKFK-GEVYADPNHSSYEALSFVS 173 (226)
Q Consensus 101 VvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~----~~~~~i~~f~~~~~~p-fpll~Dp~~~ly~alGv~~ 173 (226)
|.+|....|+.|++-...| ++.|+..-.|.. -+.++++.+.++.+++ ..-+.+.....|+.+++..
T Consensus 6 i~iY~~p~C~~c~ka~~~L-------~~~gi~~~~~di~~~~~t~~eL~~~l~~~g~~~~~~l~n~~~~~~k~l~l~~ 76 (119)
T 3f0i_A 6 VVIYHNPKCSKSRETLALL-------ENQGIAPQVIKYLETSPSVEELKRLYQQLGLNEVRAMMRCKEELYKELNLGD 76 (119)
T ss_dssp CEEECCTTCHHHHHHHHHH-------HHTTCCCEEECHHHHCCCHHHHHHHHHHHTCSSGGGGBCTTSHHHHHTTTTC
T ss_pred EEEEECCCChHHHHHHHHH-------HHcCCceEEEEeccCcCcHHHHHHHHHHcCCccHHHHhcCCCchhhhcCccc
Confidence 5678899999999865554 456766555532 4568999999999998 7677889999999999875
No 267
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=93.85 E-value=0.1 Score=39.88 Aligned_cols=51 Identities=12% Similarity=0.130 Sum_probs=29.0
Q ss_pred EEEecCCCChhHHHH-HHHHHHhHHHHHHcC---CEEEEEeCCC----HHHHHHHHHHcCC-ceeEE
Q 027245 101 VAFARHFGCVLCRKR-ADYLAAKKDVMDASG---VALVLIGPGS----VEQARTFSEQTKF-KGEVY 158 (226)
Q Consensus 101 VvF~R~~~Cp~C~~e-l~~L~~~~~~l~~~G---v~lVaIs~~~----~~~i~~f~~~~~~-pfpll 158 (226)
|++|...|||+|++- .+.| ++.| +....|..+. .+..+...+.++. .+|.+
T Consensus 39 Vvvy~~~~Cp~C~~a~k~~L-------~~~~~~~i~~~~vdvd~~~~~~~~~~~L~~~~g~~tVP~v 98 (129)
T 3ctg_A 39 VFVAAKTYCPYCKATLSTLF-------QELNVPKSKALVLELDEMSNGSEIQDALEEISGQKTVPNV 98 (129)
T ss_dssp EEEEECTTCHHHHHHHHHHH-------TTSCCCGGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE
T ss_pred EEEEECCCCCchHHHHHHHH-------HhcCccCCCcEEEEccccCCHHHHHHHHHHHhCCCCCCEE
Confidence 345678999999976 3333 3344 5555555442 2233456666665 46643
No 268
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=93.80 E-value=0.048 Score=41.24 Aligned_cols=53 Identities=6% Similarity=-0.009 Sum_probs=38.5
Q ss_pred CCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCC
Q 027245 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF 153 (226)
Q Consensus 96 ~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~ 153 (226)
....|++.||+. |.+|+...+.|.+..++++. .+.++-|..+.... .++++++
T Consensus 22 ~~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~g-k~~f~~vd~d~~~~---~a~~~gi 74 (133)
T 2djk_A 22 AGIPLAYIFAET-AEERKELSDKLKPIAEAQRG-VINFGTIDAKAFGA---HAGNLNL 74 (133)
T ss_dssp TTSCEEEEECSC-SSSHHHHHHHHHHHHHSSTT-TSEEEEECTTTTGG---GTTTTTC
T ss_pred CCCCEEEEEecC-hhhHHHHHHHHHHHHHHhCC-eEEEEEEchHHhHH---HHHHcCC
Confidence 344577888888 89999999999999888754 38888888775433 3444554
No 269
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.75 E-value=0.15 Score=38.76 Aligned_cols=49 Identities=8% Similarity=0.043 Sum_probs=30.5
Q ss_pred ecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCC----HHHHHHHHHHcCCc-eeEEe
Q 027245 104 ARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS----VEQARTFSEQTKFK-GEVYA 159 (226)
Q Consensus 104 ~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~----~~~i~~f~~~~~~p-fpll~ 159 (226)
|...|||+|++-.+.|.+ .++....|..+. .+..+.+.+.+++. +|.+.
T Consensus 32 f~~~~Cp~C~~~~~~L~~-------~~i~~~~vdid~~~~~~~~~~~l~~~~g~~~vP~l~ 85 (130)
T 2cq9_A 32 FSKTSCSYCTMAKKLFHD-------MNVNYKVVELDLLEYGNQFQDALYKMTGERTVPRIF 85 (130)
T ss_dssp EECSSCSHHHHHHHHHHH-------HTCCCEEEETTTSTTHHHHHHHHHHHHSSCCSSEEE
T ss_pred EEcCCChHHHHHHHHHHH-------cCCCcEEEECcCCcCcHHHHHHHHHHhCCCCcCEEE
Confidence 778999999986665554 355555565553 23334566666653 66443
No 270
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=93.73 E-value=0.019 Score=47.26 Aligned_cols=41 Identities=20% Similarity=0.189 Sum_probs=29.8
Q ss_pred eEEEEEecCCCChhHHHHHHHH---HHhHHHHHHcCCEEEEEeCC
Q 027245 98 KAVVAFARHFGCVLCRKRADYL---AAKKDVMDASGVALVLIGPG 139 (226)
Q Consensus 98 ~vVVvF~R~~~Cp~C~~el~~L---~~~~~~l~~~Gv~lVaIs~~ 139 (226)
+++|+-|+.+|||+|+...+.| .+..+++. .+|.++-+..+
T Consensus 114 ~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~-~~v~~~~~~v~ 157 (197)
T 1un2_A 114 APQVLEFFSFFCPHCYQFEEVLHISDNVKKKLP-EGVKMTKYHVN 157 (197)
T ss_dssp CCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSC-TTCCEEEEECS
T ss_pred CCEEEEEECCCChhHHHhCcccccHHHHHHHCC-CCCEEEEeccC
Confidence 4566667779999999998887 66666664 36777666654
No 271
>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A
Probab=93.69 E-value=0.08 Score=41.53 Aligned_cols=66 Identities=14% Similarity=0.123 Sum_probs=52.3
Q ss_pred EEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCC----CHHHHHHHHHHcCCceeEEecCChHHHHHcCCcc
Q 027245 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG----SVEQARTFSEQTKFKGEVYADPNHSSYEALSFVS 173 (226)
Q Consensus 101 VvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~----~~~~i~~f~~~~~~pfpll~Dp~~~ly~alGv~~ 173 (226)
|.+|...+|+.|++-... |++.|+....|... +.++++++.++.++|..-+.+.....|+.+++..
T Consensus 4 itiY~~p~C~~crkak~~-------L~~~gi~~~~idi~~~~~~~~eL~~~~~~~g~p~~~l~n~~~~~yk~l~l~~ 73 (141)
T 1s3c_A 4 ITIYHNPASGTSRNTLEM-------IRNSGTEPTIILYLENPPSRDELVKLIADMGISVRALLRKNVEPYEQLGLAE 73 (141)
T ss_dssp CEEECCTTCHHHHHHHHH-------HHHTTCCCEEECTTTSCCCHHHHHHHHHHHTSCHHHHBCSSSHHHHHTTTTS
T ss_pred EEEEECCCChHHHHHHHH-------HHHcCCCEEEEECCCCCccHHHHHHHhcccCCCHHHhccCCchhHHhcCCcc
Confidence 457889999999975444 45677776666654 3578999999999988777789999999999876
No 272
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=93.58 E-value=0.18 Score=36.69 Aligned_cols=52 Identities=12% Similarity=0.116 Sum_probs=31.7
Q ss_pred EEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCH-HHHHHHHHHc-CC-ceeEE
Q 027245 100 VVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV-EQARTFSEQT-KF-KGEVY 158 (226)
Q Consensus 100 VVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~-~~i~~f~~~~-~~-pfpll 158 (226)
-|+.|...|||+|++-...|. +.|+....|..+.. +..+++.+.+ +. .+|.+
T Consensus 17 ~v~vy~~~~Cp~C~~ak~~L~-------~~~i~y~~idI~~~~~~~~~l~~~~~g~~~vP~i 71 (99)
T 3qmx_A 17 KIEIYTWSTCPFCMRALALLK-------RKGVEFQEYCIDGDNEAREAMAARANGKRSLPQI 71 (99)
T ss_dssp CEEEEECTTCHHHHHHHHHHH-------HHTCCCEEEECTTCHHHHHHHHHHTTTCCCSCEE
T ss_pred CEEEEEcCCChhHHHHHHHHH-------HCCCCCEEEEcCCCHHHHHHHHHHhCCCCCCCEE
Confidence 345578999999998655554 34666666666654 3444455554 43 35633
No 273
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=93.48 E-value=0.15 Score=39.58 Aligned_cols=56 Identities=9% Similarity=0.196 Sum_probs=34.9
Q ss_pred EEEEEecC----CCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCC-CHHHHHHHHHHcCCc-ee-EEecC
Q 027245 99 AVVAFARH----FGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-SVEQARTFSEQTKFK-GE-VYADP 161 (226)
Q Consensus 99 vVVvF~R~----~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~-~~~~i~~f~~~~~~p-fp-ll~Dp 161 (226)
.|++|..+ .|||+|++-...| ++.|+....|..+ +++..+.+.+.++++ +| |+.|-
T Consensus 36 ~Vvvy~ks~~~~~~Cp~C~~ak~~L-------~~~gv~y~~vdI~~d~~~~~~L~~~~G~~tvP~VfI~G 98 (135)
T 2wci_A 36 PILLYMKGSPKLPSCGFSAQAVQAL-------AACGERFAYVDILQNPDIRAELPKYANWPTFPQLWVDG 98 (135)
T ss_dssp SEEEEESBCSSSBSSHHHHHHHHHH-------HTTCSCCEEEEGGGCHHHHHHHHHHHTCCSSCEEEETT
T ss_pred CEEEEEEecCCCCCCccHHHHHHHH-------HHcCCceEEEECCCCHHHHHHHHHHHCCCCcCEEEECC
Confidence 35666665 7999999755554 4457776667665 344455565555654 66 55553
No 274
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=92.90 E-value=0.18 Score=36.55 Aligned_cols=52 Identities=12% Similarity=0.056 Sum_probs=33.2
Q ss_pred EEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCC-HHHHHHHHHHc-C-CceeEEe
Q 027245 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS-VEQARTFSEQT-K-FKGEVYA 159 (226)
Q Consensus 101 VvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~-~~~i~~f~~~~-~-~pfpll~ 159 (226)
|+.|...|||+|.+- ++.|++.|+...-|..+. ++..+.+.+.. | -..|.+.
T Consensus 6 I~vYs~~~Cp~C~~a-------K~~L~~~gi~y~~idi~~d~~~~~~~~~~~~G~~tVP~I~ 60 (92)
T 2lqo_A 6 LTIYTTSWCGYCLRL-------KTALTANRIAYDEVDIEHNRAAAEFVGSVNGGNRTVPTVK 60 (92)
T ss_dssp EEEEECTTCSSHHHH-------HHHHHHTTCCCEEEETTTCHHHHHHHHHHSSSSSCSCEEE
T ss_pred EEEEcCCCCHhHHHH-------HHHHHhcCCceEEEEcCCCHHHHHHHHHHcCCCCEeCEEE
Confidence 444678999999963 334566788888888875 44444455543 3 3467443
No 275
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=92.79 E-value=0.22 Score=38.95 Aligned_cols=49 Identities=8% Similarity=0.043 Sum_probs=29.9
Q ss_pred ecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCC----HHHHHHHHHHcCCc-eeEEe
Q 027245 104 ARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS----VEQARTFSEQTKFK-GEVYA 159 (226)
Q Consensus 104 ~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~----~~~i~~f~~~~~~p-fpll~ 159 (226)
|...|||+|++-.+.|.+ .|+....|..+. .+..+.+++.+++. +|.+.
T Consensus 54 f~~~~Cp~C~~~k~~L~~-------~~i~~~~vdId~~~~~~~~~~~L~~~~g~~tvP~if 107 (146)
T 2ht9_A 54 FSKTSCSYCTMAKKLFHD-------MNVNYKVVELDLLEYGNQFQDALYKMTGERTVPRIF 107 (146)
T ss_dssp EECTTCHHHHHHHHHHHH-------HTCCCEEEEGGGCTTHHHHHHHHHHHHSCCCSCEEE
T ss_pred EECCCChhHHHHHHHHHH-------cCCCeEEEECccCcCCHHHHHHHHHHhCCCCcCeEE
Confidence 788999999986666554 345544555442 33334566666753 66443
No 276
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=92.58 E-value=0.35 Score=34.87 Aligned_cols=21 Identities=29% Similarity=0.493 Sum_probs=16.1
Q ss_pred EEEecCCCChhHHHHHHHHHH
Q 027245 101 VAFARHFGCVLCRKRADYLAA 121 (226)
Q Consensus 101 VvF~R~~~Cp~C~~el~~L~~ 121 (226)
|+.|...|||+|++-...|.+
T Consensus 24 v~ly~~~~Cp~C~~ak~~L~~ 44 (103)
T 3nzn_A 24 VIMYGLSTCVWCKKTKKLLTD 44 (103)
T ss_dssp EEEEECSSCHHHHHHHHHHHH
T ss_pred EEEEcCCCCchHHHHHHHHHH
Confidence 555789999999987666654
No 277
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=92.55 E-value=0.33 Score=35.82 Aligned_cols=50 Identities=14% Similarity=0.194 Sum_probs=28.9
Q ss_pred ecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCC---CHHHHH-HHHHHcCCc-ee-EEec
Q 027245 104 ARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG---SVEQAR-TFSEQTKFK-GE-VYAD 160 (226)
Q Consensus 104 ~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~---~~~~i~-~f~~~~~~p-fp-ll~D 160 (226)
|...|||+|.+-...|. +.|+..-.|..+ +.+.++ .+.+.++.+ +| ++.|
T Consensus 22 y~~~~Cp~C~~ak~~L~-------~~~i~~~~~dvd~~~~~~~~~~~l~~~~g~~tvP~vfi~ 77 (114)
T 3h8q_A 22 FSKSYCPHSTRVKELFS-------SLGVECNVLELDQVDDGARVQEVLSEITNQKTVPNIFVN 77 (114)
T ss_dssp EECTTCHHHHHHHHHHH-------HTTCCCEEEETTTSTTHHHHHHHHHHHHSCCSSCEEEET
T ss_pred EEcCCCCcHHHHHHHHH-------HcCCCcEEEEecCCCChHHHHHHHHHHhCCCccCEEEEC
Confidence 67799999986555444 346655555555 333443 344555543 66 4444
No 278
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=92.50 E-value=0.28 Score=37.07 Aligned_cols=56 Identities=16% Similarity=0.199 Sum_probs=32.3
Q ss_pred EEEEEecC----CCChhHHHHHHHHHHhHHHHHHcCCE-EEEEeCCCHHHH-HHHHHHcCC-cee-EEecC
Q 027245 99 AVVAFARH----FGCVLCRKRADYLAAKKDVMDASGVA-LVLIGPGSVEQA-RTFSEQTKF-KGE-VYADP 161 (226)
Q Consensus 99 vVVvF~R~----~~Cp~C~~el~~L~~~~~~l~~~Gv~-lVaIs~~~~~~i-~~f~~~~~~-pfp-ll~Dp 161 (226)
.|++|-.. .|||+|.+-...| ++.|+. ...|..+..+++ +.+.+.++. .+| |+.|-
T Consensus 21 ~Vvvfsk~t~~~p~Cp~C~~ak~lL-------~~~gv~~~~~vdV~~d~~~~~~l~~~tg~~tvP~vfI~g 84 (118)
T 2wem_A 21 KVVVFLKGTPEQPQCGFSNAVVQIL-------RLHGVRDYAAYNVLDDPELRQGIKDYSNWPTIPQVYLNG 84 (118)
T ss_dssp SEEEEESBCSSSBSSHHHHHHHHHH-------HHTTCCCCEEEESSSCHHHHHHHHHHHTCCSSCEEEETT
T ss_pred CEEEEEecCCCCCccHHHHHHHHHH-------HHcCCCCCEEEEcCCCHHHHHHHHHHhCCCCcCeEEECC
Confidence 46667776 4999999754444 445663 555555543333 444444454 466 55554
No 279
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=91.89 E-value=0.033 Score=49.08 Aligned_cols=26 Identities=15% Similarity=0.349 Sum_probs=21.6
Q ss_pred EEEecCCCChhHHHHHHHHHHhHHHH
Q 027245 101 VAFARHFGCVLCRKRADYLAAKKDVM 126 (226)
Q Consensus 101 VvF~R~~~Cp~C~~el~~L~~~~~~l 126 (226)
++.|++.|||+|++..+.+.+..+++
T Consensus 201 vV~F~A~WC~~Ck~l~p~le~lA~~l 226 (291)
T 3kp9_A 201 GTMYGAYWCPHCQDQKELFGAAFDQV 226 (291)
T ss_dssp CEEEECTTCHHHHHHHHHHGGGGGGS
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHc
Confidence 56778999999999999988876544
No 280
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=91.51 E-value=0.49 Score=33.43 Aligned_cols=58 Identities=3% Similarity=-0.088 Sum_probs=32.2
Q ss_pred EEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCH-HHHHHHHHHcCC---cee-EEec
Q 027245 102 AFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV-EQARTFSEQTKF---KGE-VYAD 160 (226)
Q Consensus 102 vF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~-~~i~~f~~~~~~---pfp-ll~D 160 (226)
+.|-..+||+|.- -.+-.+....|++.|+....|..+.. +..+++.+..+. .+| |+.|
T Consensus 5 ~ly~~~~C~~c~~-~~~~~~ak~~L~~~~i~~~~~di~~~~~~~~~l~~~~g~~~~~vP~ifi~ 67 (93)
T 1t1v_A 5 RVYSTSVTGSREI-KSQQSEVTRILDGKRIQYQLVDISQDNALRDEMRTLAGNPKATPPQIVNG 67 (93)
T ss_dssp EEEECSSCSCHHH-HHHHHHHHHHHHHTTCCCEEEETTSCHHHHHHHHHHTTCTTCCSCEEEET
T ss_pred EEEEcCCCCCchh-hHHHHHHHHHHHHCCCceEEEECCCCHHHHHHHHHHhCCCCCCCCEEEEC
Confidence 3456799999940 00001122335567888777777643 444556666664 466 4444
No 281
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=91.36 E-value=0.36 Score=35.52 Aligned_cols=60 Identities=15% Similarity=0.124 Sum_probs=34.2
Q ss_pred cCCCeEEEEEecC----CCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCC-CHHHHHHHHHHcCC-cee-EEecC
Q 027245 94 WKDRKAVVAFARH----FGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-SVEQARTFSEQTKF-KGE-VYADP 161 (226)
Q Consensus 94 ~~~~~vVVvF~R~----~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~-~~~~i~~f~~~~~~-pfp-ll~Dp 161 (226)
.+..+ |++|-.. .|||+|++-...|. +.|+....|..+ +++..+.+.+.++. .+| |+.|.
T Consensus 15 i~~~~-Vvvy~k~t~~~p~Cp~C~~ak~~L~-------~~gi~~~~~dI~~~~~~~~~l~~~~g~~tvP~ifi~g 81 (109)
T 3ipz_A 15 VNSEK-VVLFMKGTRDFPMCGFSNTVVQILK-------NLNVPFEDVNILENEMLRQGLKEYSNWPTFPQLYIGG 81 (109)
T ss_dssp HTSSS-EEEEESBCSSSBSSHHHHHHHHHHH-------HTTCCCEEEEGGGCHHHHHHHHHHHTCSSSCEEEETT
T ss_pred HccCC-EEEEEecCCCCCCChhHHHHHHHHH-------HcCCCcEEEECCCCHHHHHHHHHHHCCCCCCeEEECC
Confidence 33444 6667666 49999997544444 456666666654 33334444444454 356 55554
No 282
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=91.04 E-value=0.11 Score=41.75 Aligned_cols=36 Identities=19% Similarity=0.313 Sum_probs=26.0
Q ss_pred EEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEe
Q 027245 99 AVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG 137 (226)
Q Consensus 99 vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs 137 (226)
+.|+-|..+|||+|....+.|.+..+++ ++.+.-+-
T Consensus 24 ~~vvef~d~~Cp~C~~~~~~~~~~~~~~---~v~~~~~p 59 (185)
T 3feu_A 24 APVTEVFALSCGHCRNMENFLPVISQEA---GTDIGKMH 59 (185)
T ss_dssp CSEEEEECTTCHHHHHHGGGHHHHHHHH---TSCCEEEE
T ss_pred CEEEEEECCCChhHHHhhHHHHHHHHHh---CCeEEEEe
Confidence 4455555799999999999888887777 45544443
No 283
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=90.46 E-value=0.21 Score=37.59 Aligned_cols=64 Identities=14% Similarity=0.176 Sum_probs=46.8
Q ss_pred EEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCC----CHHHHHHHHHHcCCceeEEecCChHHHHHcCCcc
Q 027245 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG----SVEQARTFSEQTKFKGEVYADPNHSSYEALSFVS 173 (226)
Q Consensus 101 VvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~----~~~~i~~f~~~~~~pfpll~Dp~~~ly~alGv~~ 173 (226)
|.+|-..+|+.|++-...|. +.|+....|... +.++++++.++.|+ .-+.+.....|+.+|...
T Consensus 7 i~iY~~~~C~~C~ka~~~L~-------~~gi~y~~~di~~~~~~~~~l~~~~~~~g~--~~l~n~~~~~~k~l~~~~ 74 (120)
T 2kok_A 7 VTIYGIKNCDTMKKARIWLE-------DHGIDYTFHDYKKEGLDAETLDRFLKTVPW--EQLLNRAGTTFRKLPEDV 74 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHH-------HHTCCEEEEEHHHHCCCHHHHHHHHHHSCG--GGTBCSSSHHHHHSCHHH
T ss_pred EEEEECCCChHHHHHHHHHH-------HcCCcEEEEeeeCCCCCHHHHHHHHHHcCh--HhhccCCchhhHhcCchh
Confidence 56778899999997655544 457766555542 34788899988885 455678899999998753
No 284
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=90.44 E-value=0.87 Score=33.52 Aligned_cols=49 Identities=6% Similarity=-0.041 Sum_probs=29.4
Q ss_pred EEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCH-HHHHHHHHH
Q 027245 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV-EQARTFSEQ 150 (226)
Q Consensus 101 VvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~-~~i~~f~~~ 150 (226)
|+.|-..+||+|.. -..-++....|++.|+....|..+.. +..+.+.+.
T Consensus 10 V~vy~~~~C~~C~~-~~~~~~ak~~L~~~gi~y~~vdI~~~~~~~~~l~~~ 59 (111)
T 2ct6_A 10 IRVFIASSSGFVAI-KKKQQDVVRFLEANKIEFEEVDITMSEEQRQWMYKN 59 (111)
T ss_dssp EEEEECSSCSCHHH-HHHHHHHHHHHHHTTCCEEEEETTTCHHHHHHHHHS
T ss_pred EEEEEcCCCCCccc-chhHHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHH
Confidence 44456799999983 11111234445678888888888754 444445555
No 285
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=90.39 E-value=0.38 Score=35.71 Aligned_cols=61 Identities=11% Similarity=0.154 Sum_probs=34.5
Q ss_pred ccCCCeEEEEEecC----CCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCC-HHHHHHHHHHcCC-cee-EEecC
Q 027245 93 LWKDRKAVVAFARH----FGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS-VEQARTFSEQTKF-KGE-VYADP 161 (226)
Q Consensus 93 l~~~~~vVVvF~R~----~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~-~~~i~~f~~~~~~-pfp-ll~Dp 161 (226)
+.+..+ |++|..+ .|||+|.+-...|. +.|+....+..+. ++..+.+.+.++. .+| |+.|.
T Consensus 12 ~i~~~~-Vvlf~kg~~~~~~Cp~C~~ak~~L~-------~~gi~y~~~di~~d~~~~~~l~~~~g~~tvP~ifi~g 79 (111)
T 3zyw_A 12 LTHAAP-CMLFMKGTPQEPRCGFSKQMVEILH-------KHNIQFSSFDIFSDEEVRQGLKAYSSWPTYPQLYVSG 79 (111)
T ss_dssp HHTSSS-EEEEESBCSSSBSSHHHHHHHHHHH-------HTTCCCEEEEGGGCHHHHHHHHHHHTCCSSCEEEETT
T ss_pred HHhcCC-EEEEEecCCCCCcchhHHHHHHHHH-------HcCCCeEEEECcCCHHHHHHHHHHHCCCCCCEEEECC
Confidence 334444 5566552 89999997554444 4566666666543 3333444455454 366 55553
No 286
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=90.18 E-value=0.22 Score=37.21 Aligned_cols=64 Identities=13% Similarity=0.184 Sum_probs=47.2
Q ss_pred EEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCC----CHHHHHHHHHHcCCceeEEecCChHHHHHcCCcc
Q 027245 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG----SVEQARTFSEQTKFKGEVYADPNHSSYEALSFVS 173 (226)
Q Consensus 101 VvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~----~~~~i~~f~~~~~~pfpll~Dp~~~ly~alGv~~ 173 (226)
|.+|...+||.|++-... |++.|+....|... +.++++++.++.|+ .-+.+.....|+.+|...
T Consensus 2 i~iY~~~~C~~C~kak~~-------L~~~gi~~~~~di~~~~~~~~~l~~~~~~~g~--~~l~n~~~~~~k~l~~~~ 69 (114)
T 1rw1_A 2 YVLYGIKACDTMKKARTW-------LDEHKVAYDFHDYKAVGIDREHLRRWCAEHGW--QTVLNRAGTTFRKLDEAQ 69 (114)
T ss_dssp EEEEECSSCHHHHHHHHH-------HHHTTCCEEEEEHHHHCCCHHHHHHHHHHHCH--HHHBCTTSHHHHTSCHHH
T ss_pred EEEEECCCChHHHHHHHH-------HHHCCCceEEEeecCCCCCHHHHHHHHHhCCh--HHhccCCcHhHHhcCccc
Confidence 456778999999975444 44568776666553 33788999998884 556678899999998753
No 287
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=90.04 E-value=0.93 Score=34.08 Aligned_cols=56 Identities=20% Similarity=0.257 Sum_probs=33.0
Q ss_pred EEEEEecC----CCChhHHHHHHHHHHhHHHHHHcCCE---EEEEeCCCH-HHHHHHHHHcCCc-ee-EEecC
Q 027245 99 AVVAFARH----FGCVLCRKRADYLAAKKDVMDASGVA---LVLIGPGSV-EQARTFSEQTKFK-GE-VYADP 161 (226)
Q Consensus 99 vVVvF~R~----~~Cp~C~~el~~L~~~~~~l~~~Gv~---lVaIs~~~~-~~i~~f~~~~~~p-fp-ll~Dp 161 (226)
.|++|-.. .|||+|.+-...|.+ .|+. ...+..+.. +..+.+.+.++.+ +| |+.|.
T Consensus 17 ~Vvvfsk~t~~~p~Cp~C~~ak~lL~~-------~gv~~~~~~~~dv~~~~~~~~~l~~~sg~~tvP~vfI~g 82 (121)
T 3gx8_A 17 PVVLFMKGTPEFPKCGFSRATIGLLGN-------QGVDPAKFAAYNVLEDPELREGIKEFSEWPTIPQLYVNK 82 (121)
T ss_dssp SEEEEESBCSSSBCTTHHHHHHHHHHH-------HTBCGGGEEEEECTTCHHHHHHHHHHHTCCSSCEEEETT
T ss_pred CEEEEEeccCCCCCCccHHHHHHHHHH-------cCCCcceEEEEEecCCHHHHHHHHHHhCCCCCCeEEECC
Confidence 46677776 499999975554443 4665 555555543 3334444555553 66 56654
No 288
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=89.72 E-value=0.93 Score=43.64 Aligned_cols=128 Identities=22% Similarity=0.286 Sum_probs=75.1
Q ss_pred CccccCcCCCcEEec-CCCCeEeCCCccC--CCeEEEEEecCCCChhHHHHHHHHHHhHH-------HHH------HcCC
Q 027245 68 SEDTKNLLDTVKVYD-VNGNAIPISDLWK--DRKAVVAFARHFGCVLCRKRADYLAAKKD-------VMD------ASGV 131 (226)
Q Consensus 68 ~~~~g~~apdf~L~D-~~G~~v~Lsdl~~--~~~vVVvF~R~~~Cp~C~~el~~L~~~~~-------~l~------~~Gv 131 (226)
...+|..+|++.|.. .+|+++.|.+++. ++.+||+|--..-.+.+.+.+.++.+... .+. +.-+
T Consensus 478 ~~~~G~r~p~~~~~~~~~g~~~~l~~~l~~~g~~~ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 557 (665)
T 1pn0_A 478 NCVVGTRFKSQPVVRHSEGLWMHFGDRLVTDGRFRIIVFAGKATDATQMSRIKKFAAYLDSENSVISRYTPKGADRNSRI 557 (665)
T ss_dssp TSCTTSBCCCCEEEETTTTEEEEGGGGCCCSSCEEEEEEEECTTSHHHHHHHHHHHHHHHSTTSHHHHHSBTTSCTTSSE
T ss_pred CCCCcCCCCCCeEEecCCCcEEEHhHhhccCCCEEEEEecCCcccchhHHHHHHHHHHhhccccHHhhcCCcccCcccee
Confidence 356899999999976 4899999999885 45667776443333445555555554432 221 1127
Q ss_pred EEEEEeCCCHHHH--HHHHH---HcCCce-eEEec------CChHHHHHcCCcc--ccceeecchh---------hHHHH
Q 027245 132 ALVLIGPGSVEQA--RTFSE---QTKFKG-EVYAD------PNHSSYEALSFVS--GVLVTFTPKA---------GLKII 188 (226)
Q Consensus 132 ~lVaIs~~~~~~i--~~f~~---~~~~pf-pll~D------p~~~ly~alGv~~--~~~~t~~p~a---------~~~~~ 188 (226)
.++.|.......+ ..+-+ ..++++ .+|.| ++..+|+.||+.+ +....+-|.. -...+
T Consensus 558 ~~~~i~~~~~~~~~~~~~p~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~g~~vlvRPD~yV~~~~~~~~~~~l 637 (665)
T 1pn0_A 558 DVITIHSCHRDDIEMHDFPAPALHPKWQYDFIYADCDSWHHPHPKSYQAWGVDETKGAVVVVRPDGYTSLVTDLEGTAEI 637 (665)
T ss_dssp EEEEEESSCTTSCCGGGSCTTTTSCTTCCSSEEECSCCSSSCCCCHHHHHTBCTTTCEEEEECTTSBEEEEECTTTHHHH
T ss_pred EEEEEecCCCCccchhhCCHHHcCcccchheEeecCcccccccccHHHHcCCCCCCceEEEECCCCcEEEEeccccHHHH
Confidence 7888866543221 11111 002233 48888 4677999999976 5444444431 13345
Q ss_pred HHHHhhh
Q 027245 189 QSYMEGY 195 (226)
Q Consensus 189 ~~~~~G~ 195 (226)
..+++++
T Consensus 638 ~~~~~~~ 644 (665)
T 1pn0_A 638 DRYFSGI 644 (665)
T ss_dssp HHHHHTT
T ss_pred HHHHHHH
Confidence 6666665
No 289
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=89.50 E-value=0.4 Score=37.51 Aligned_cols=27 Identities=19% Similarity=0.321 Sum_probs=22.5
Q ss_pred CCeEEEEEecCCCChhHHHHHHHHHHh
Q 027245 96 DRKAVVAFARHFGCVLCRKRADYLAAK 122 (226)
Q Consensus 96 ~~~vVVvF~R~~~Cp~C~~el~~L~~~ 122 (226)
+.++.|+.|-.++||+|++..+.|.++
T Consensus 13 ~a~~~vv~f~D~~Cp~C~~~~~~l~~l 39 (147)
T 3gv1_A 13 NGKLKVAVFSDPDCPFCKRLEHEFEKM 39 (147)
T ss_dssp TCCEEEEEEECTTCHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCCChhHHHHHHHHhhc
Confidence 457888888899999999988887654
No 290
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=88.23 E-value=0.61 Score=44.53 Aligned_cols=113 Identities=14% Similarity=0.058 Sum_probs=65.6
Q ss_pred ccccCcCCCcEEec-CCCCeEeCCCccC--CCeEEEEEecCCCChhHH-HHHHHHHHhH--------HHHHH------cC
Q 027245 69 EDTKNLLDTVKVYD-VNGNAIPISDLWK--DRKAVVAFARHFGCVLCR-KRADYLAAKK--------DVMDA------SG 130 (226)
Q Consensus 69 ~~~g~~apdf~L~D-~~G~~v~Lsdl~~--~~~vVVvF~R~~~Cp~C~-~el~~L~~~~--------~~l~~------~G 130 (226)
..+|..+|++.|.. .+|+++.|.+++. ++.+||+| -....+.+. ..+.++.+.. ..+.. .=
T Consensus 467 ~~~G~r~p~~~~~~~~~g~~~~l~~~~~~~g~~~ll~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 545 (639)
T 2dkh_A 467 FTVGMRFHSAPVVRVCDAKPVQLGHCGKADGRWRLYAF-AAQNDLAQPESGLLALCRFLEGDAASPLRRFTPAGQDIDSI 545 (639)
T ss_dssp SCTTSBCCCCEEEETTTCCEEEGGGGCCSSSCEEEEEE-CCTTTTTCTTSHHHHHHHHHHHCTTCHHHHHSCTTSCTTSS
T ss_pred CCCcCCCCCCeEEecCCCCEEEHHHhhccCCCEEEEEe-cCCCCchhhHHHHHHHHHHHhhCCccHHHhcCCCCCCcCce
Confidence 56799999999976 4899999999885 35666665 333233332 2333333322 12311 12
Q ss_pred CEEEEEeCCCHH---------HHHHHHHHcCC-ce-eEEecCC----hHHHHHcCCcc--ccceeecch
Q 027245 131 VALVLIGPGSVE---------QARTFSEQTKF-KG-EVYADPN----HSSYEALSFVS--GVLVTFTPK 182 (226)
Q Consensus 131 v~lVaIs~~~~~---------~i~~f~~~~~~-pf-pll~Dp~----~~ly~alGv~~--~~~~t~~p~ 182 (226)
++++.|...... .++.+..++++ ++ .+|.|.. ..+|+.||+.+ +....+-|.
T Consensus 546 ~~~~~i~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~g~~~~~g~~v~vRPD 614 (639)
T 2dkh_A 546 FDLRAVFPQAYTEVALETLPALLLPPKGQLGMIDYEKVFSPDLKNAGQDIFELRGIDRQQGALVVVRPD 614 (639)
T ss_dssp EEEEEECSSCGGGCCGGGSCGGGSCEETTTTEECCCSEEECCCSSTTCCHHHHTTBCTTTCEEEEECTT
T ss_pred EEEEEEecCCCCccchhhCcHhhCCcccccccccceeEEeCCCcccccchHHHhCCCCCceEEEEECCC
Confidence 577878666422 12222233343 33 4788842 67999999976 544444554
No 291
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=88.05 E-value=0.86 Score=35.19 Aligned_cols=39 Identities=21% Similarity=0.295 Sum_probs=27.4
Q ss_pred CCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEE
Q 027245 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLI 136 (226)
Q Consensus 96 ~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaI 136 (226)
+.++||.|+ -+.||+|.+.-+.+.+..+++.+ ++.++-+
T Consensus 21 ~~~~vvEf~-dy~Cp~C~~~~~~~~~l~~~~~~-~~~~~~~ 59 (184)
T 4dvc_A 21 SSPVVSEFF-SFYCPHCNTFEPIIAQLKQQLPE-GAKFQKN 59 (184)
T ss_dssp SSCEEEEEE-CTTCHHHHHHHHHHHHHHHTSCT-TCEEEEE
T ss_pred CCCEEEEEE-CCCCHhHHHHhHHHHHHHhhcCC-ceEEEEE
Confidence 456666665 69999999988888777776644 3455544
No 292
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=87.19 E-value=0.45 Score=38.35 Aligned_cols=41 Identities=10% Similarity=-0.025 Sum_probs=31.0
Q ss_pred CCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEE
Q 027245 96 DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLI 136 (226)
Q Consensus 96 ~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaI 136 (226)
+.|+.|+.|--+.||+|.+..+.+.+..++.....|+++..
T Consensus 13 ~a~vtiv~f~D~~Cp~C~~~~~~~~~~l~~~~~g~v~~v~r 53 (182)
T 3gn3_A 13 HGPRLFEVFLEPTCPFSVKAFFKLDDLLAQAGEDNVTVRIR 53 (182)
T ss_dssp CCSEEEEEEECTTCHHHHHHHTTHHHHHHHHCTTTEEEEEE
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHHHhCCCCEEEEEE
Confidence 45888999999999999998888887666542234666654
No 293
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=86.23 E-value=1.2 Score=34.85 Aligned_cols=39 Identities=15% Similarity=0.295 Sum_probs=26.8
Q ss_pred eEEEEEecCCCChhHHHHHHHH-HHhHHHHHHcCCEEEEEeC
Q 027245 98 KAVVAFARHFGCVLCRKRADYL-AAKKDVMDASGVALVLIGP 138 (226)
Q Consensus 98 ~vVVvF~R~~~Cp~C~~el~~L-~~~~~~l~~~Gv~lVaIs~ 138 (226)
+++|. |+.+.||+|....+.| .++.+++. ..++++.+..
T Consensus 19 ~~~ie-f~d~~CP~C~~~~~~l~~~l~~~~~-~~v~~~~~~l 58 (195)
T 3c7m_A 19 KTLIK-VFSYACPFCYKYDKAVTGPVSEKVK-DIVAFTPFHL 58 (195)
T ss_dssp TEEEE-EECTTCHHHHHHHHHTHHHHHHHTT-TTCEEEEEEC
T ss_pred cEEEE-EEeCcCcchhhCcHHHHHHHHHhCC-CceEEEEEec
Confidence 34454 4569999999988888 66666554 3467666653
No 294
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=85.06 E-value=0.41 Score=38.66 Aligned_cols=39 Identities=18% Similarity=0.203 Sum_probs=27.2
Q ss_pred eEEEEEecCCCChhHHHHHHHH---HHhHHHHHHcCCEEEEEe
Q 027245 98 KAVVAFARHFGCVLCRKRADYL---AAKKDVMDASGVALVLIG 137 (226)
Q Consensus 98 ~vVVvF~R~~~Cp~C~~el~~L---~~~~~~l~~~Gv~lVaIs 137 (226)
++.|+-|..++||+|....+.| .+..+++.+ +++++-+.
T Consensus 22 ~~~vvef~d~~Cp~C~~~~~~l~~~~~l~~~~~~-~v~~~~~~ 63 (191)
T 3l9s_A 22 EPQVLEFFSFYCPHCYQFEEVLHVSDNVKKKLPE-GTKMTKYH 63 (191)
T ss_dssp SSCEEEEECTTCHHHHHHHHTSCHHHHHHHHSCT-TCCEEEEE
T ss_pred CCeEEEEECCCChhHHHhChhccchHHHHHhCCC-CcEEEEEe
Confidence 3456677799999999988876 455565543 56666554
No 295
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=84.79 E-value=1.4 Score=34.62 Aligned_cols=42 Identities=12% Similarity=0.286 Sum_probs=30.1
Q ss_pred CCeEEEEEecCCCChhHHHHHHHHH-HhHHHHHH-cCCEEEEEe
Q 027245 96 DRKAVVAFARHFGCVLCRKRADYLA-AKKDVMDA-SGVALVLIG 137 (226)
Q Consensus 96 ~~~vVVvF~R~~~Cp~C~~el~~L~-~~~~~l~~-~Gv~lVaIs 137 (226)
+.++.|+.|.-+.||+|....+.+. .+.+++.+ .+|+++...
T Consensus 10 ~a~~~i~~f~D~~Cp~C~~~~~~l~~~l~~~~~~~~~v~~~~~~ 53 (186)
T 3bci_A 10 NGKPLVVVYGDYKCPYCKELDEKVMPKLRKNYIDNHKVEYQFVN 53 (186)
T ss_dssp -CCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSSEEEEEE
T ss_pred CCCeEEEEEECCCChhHHHHHHHHHHHHHHHhccCCeEEEEEEe
Confidence 3577788888999999999988884 45555543 347776643
No 296
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=84.49 E-value=1.8 Score=36.07 Aligned_cols=54 Identities=13% Similarity=0.066 Sum_probs=33.6
Q ss_pred CCeEEEEEecCCC--ChhHHHHHHHHHHhHHHHHH-cC---CEEEEEeCCCHHHHHHHHHHcCC
Q 027245 96 DRKAVVAFARHFG--CVLCRKRADYLAAKKDVMDA-SG---VALVLIGPGSVEQARTFSEQTKF 153 (226)
Q Consensus 96 ~~~vVVvF~R~~~--Cp~C~~el~~L~~~~~~l~~-~G---v~lVaIs~~~~~~i~~f~~~~~~ 153 (226)
++|++|.|| ..| |+.|++-.+.+.+..+.... .| +.++.|..+.... .++++++
T Consensus 25 ~~pv~v~~~-~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~~~~---~~~~~gv 84 (243)
T 2hls_A 25 VNPVEVHVF-LSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRESDSD---KFSEFKV 84 (243)
T ss_dssp CSCEEEEEE-ECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETTTTHH---HHHHTTC
T ss_pred CCCEEEEEE-eCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCCcCHH---HHHhcCC
Confidence 356666665 677 99999887777776655321 12 7777777765433 3444454
No 297
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=84.03 E-value=2.4 Score=34.14 Aligned_cols=99 Identities=12% Similarity=-0.006 Sum_probs=60.3
Q ss_pred CCCeEEEEEecCCCChhHHHHHHHHHHh--HHHHHHcCCEEEEEeCCCHHHHH---------------HHH---HHcCCc
Q 027245 95 KDRKAVVAFARHFGCVLCRKRADYLAAK--KDVMDASGVALVLIGPGSVEQAR---------------TFS---EQTKFK 154 (226)
Q Consensus 95 ~~~~vVVvF~R~~~Cp~C~~el~~L~~~--~~~l~~~Gv~lVaIs~~~~~~i~---------------~f~---~~~~~p 154 (226)
+++|.|+|++.+.+|+.|.....++-.. -.++-+.+..+++....+.+..+ ... +-.++|
T Consensus 53 ~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~~nfV~w~~dv~~~e~~~~~~~~~~~~~g~~~a~~~~~~~~~~~P 132 (178)
T 2ec4_A 53 RDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQNFITWAWDLTKDSNRARFLTMCNRHFGSVVAQTIRTQKTDQFP 132 (178)
T ss_dssp TTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHHHTEEEEEEECCSHHHHHHHHHHHHHHTCHHHHHHHHHSCSTTCS
T ss_pred hhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHHcCEEEEEEeCCCchhhhhhhhhhhhhhHHHHHHHHhhcCCCCCC
Confidence 3568999999999999999877655332 22333458888888888876322 111 234678
Q ss_pred eeEEecCChHHHHHcCCccccceeecchhhHHHHHHHHhhhc
Q 027245 155 GEVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYR 196 (226)
Q Consensus 155 fpll~Dp~~~ly~alGv~~~~~~t~~p~a~~~~~~~~~~G~r 196 (226)
+-++.++.+.- +.+.........|......+..++..|.
T Consensus 133 ~l~ii~~~~~~---~~vl~~~~G~~~~~~ll~~L~~~~e~~~ 171 (178)
T 2ec4_A 133 LFLIIMGKRSS---NEVLNVIQGNTTVDELMMRLMAAMEIFT 171 (178)
T ss_dssp EEEEECCCSSC---CCEEEEECSCCCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEcCCCc---eEEEEEEeCCCCHHHHHHHHHHHHHHhh
Confidence 87888887421 1111112223355566666666666554
No 298
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=83.71 E-value=3.7 Score=31.04 Aligned_cols=62 Identities=21% Similarity=0.239 Sum_probs=35.3
Q ss_pred ccCCCeEEEEEecC----CCChhHHHHHHHHHHhHHHHHHcCCE-EEEEeCCC-HHHHHHHHHHcCCc-ee-EEecCC
Q 027245 93 LWKDRKAVVAFARH----FGCVLCRKRADYLAAKKDVMDASGVA-LVLIGPGS-VEQARTFSEQTKFK-GE-VYADPN 162 (226)
Q Consensus 93 l~~~~~vVVvF~R~----~~Cp~C~~el~~L~~~~~~l~~~Gv~-lVaIs~~~-~~~i~~f~~~~~~p-fp-ll~Dp~ 162 (226)
+.+..+ ||+|.-+ ..||+|.+-..-| ++.|+. ...|..++ ++.-+...+.++++ +| |+.|-+
T Consensus 16 ~i~~~~-VvvF~Kgt~~~P~C~fc~~ak~lL-------~~~gv~~~~~~~v~~~~~~r~~l~~~sg~~TvPqIFI~g~ 85 (118)
T 2wul_A 16 LVKKDK-VVVFLKGTPEQPQCGFSNAVVQIL-------RLHGVRDYAAYNVLDDPELRQGIKDYSNWPTIPQVYLNGE 85 (118)
T ss_dssp HHHHSS-EEEEESBCSSSBSSHHHHHHHHHH-------HHTTCCSCEEEETTSCHHHHHHHHHHHTCCSSCEEEETTE
T ss_pred HHhcCC-EEEEEcCCCCCCCCHHHHHHHHHH-------HHhCCcCeEeecccCCHHHHHHHHHhccCCCCCeEeECCE
Confidence 333344 6677765 4899999755444 445652 44455443 44334455556765 77 777643
No 299
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=83.69 E-value=1.3 Score=38.64 Aligned_cols=40 Identities=18% Similarity=0.282 Sum_probs=29.6
Q ss_pred CeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCC
Q 027245 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG 139 (226)
Q Consensus 97 ~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~ 139 (226)
++.+|+.|.-..||+|++..++|.+..+ +..|+++.+..-
T Consensus 147 gk~~I~vFtDp~CPYCkkl~~~l~~~l~---~~~Vr~i~~Pil 186 (273)
T 3tdg_A 147 KDKILYIVSDPMCPHCQKELTKLRDHLK---ENTVRMVVVGWL 186 (273)
T ss_dssp TTCEEEEEECTTCHHHHHHHHTHHHHHH---HCEEEEEECCCS
T ss_pred CCeEEEEEECcCChhHHHHHHHHHHHhh---CCcEEEEEeecc
Confidence 4566777779999999999999886554 456677766643
No 300
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=80.89 E-value=1.7 Score=35.61 Aligned_cols=53 Identities=15% Similarity=0.154 Sum_probs=30.6
Q ss_pred EEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCC-ceeEEec
Q 027245 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF-KGEVYAD 160 (226)
Q Consensus 101 VvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~-pfpll~D 160 (226)
|+.|...|||+|++-...|. +.|+....|..+.....+++.+.++. ..|.+..
T Consensus 172 i~ly~~~~Cp~C~~a~~~L~-------~~~i~~~~~~i~~~~~~~~l~~~~g~~~vP~~~~ 225 (241)
T 1nm3_A 172 ISIFTKPGCPFCAKAKQLLH-------DKGLSFEEIILGHDATIVSVRAVSGRTTVPQVFI 225 (241)
T ss_dssp EEEEECSSCHHHHHHHHHHH-------HHTCCCEEEETTTTCCHHHHHHHTCCSSSCEEEE
T ss_pred EEEEECCCChHHHHHHHHHH-------HcCCceEEEECCCchHHHHHHHHhCCCCcCEEEE
Confidence 55567789999997555444 34555555555432223555556664 3665543
No 301
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=80.47 E-value=2.2 Score=32.51 Aligned_cols=62 Identities=6% Similarity=0.006 Sum_probs=33.2
Q ss_pred cCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcC--CEEEEEeCC-CHHHHHHHH-HHcCC-cee-EEecC
Q 027245 94 WKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASG--VALVLIGPG-SVEQARTFS-EQTKF-KGE-VYADP 161 (226)
Q Consensus 94 ~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~G--v~lVaIs~~-~~~~i~~f~-~~~~~-pfp-ll~Dp 161 (226)
.+..+ |++ |-..|||+|.+--..|.+. ...| ..++-|..+ +.+.++++. +.++. ++| |+.|-
T Consensus 11 i~~~~-Vvv-ysk~~Cp~C~~ak~lL~~~----~~~~v~~~~idid~~~d~~~~~~~l~~~~G~~tVP~IfI~G 78 (127)
T 3l4n_A 11 LDLSP-III-FSKSTCSYSKGMKELLENE----YQFIPNYYIIELDKHGHGEELQEYIKLVTGRGTVPNLLVNG 78 (127)
T ss_dssp HTSCS-EEE-EECTTCHHHHHHHHHHHHH----EEEESCCEEEEGGGSTTHHHHHHHHHHHHSCCSSCEEEETT
T ss_pred HccCC-EEE-EEcCCCccHHHHHHHHHHh----cccCCCcEEEEecCCCCHHHHHHHHHHHcCCCCcceEEECC
Confidence 33445 343 4469999999765555542 1123 345555543 334555554 44454 467 56554
No 302
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=79.69 E-value=2.5 Score=34.24 Aligned_cols=43 Identities=12% Similarity=0.168 Sum_probs=30.0
Q ss_pred CCeEEEEEecCCCChhHHHHHHHHH-HhHHHHHH-cCCEEEEEeC
Q 027245 96 DRKAVVAFARHFGCVLCRKRADYLA-AKKDVMDA-SGVALVLIGP 138 (226)
Q Consensus 96 ~~~vVVvF~R~~~Cp~C~~el~~L~-~~~~~l~~-~Gv~lVaIs~ 138 (226)
+.|+.|+.|.-+.||+|.+..+.+. .+.+++-+ ..|+++-.-.
T Consensus 28 ~a~vtvvef~D~~CP~C~~~~~~~~~~l~~~~~~~g~v~~~~~~~ 72 (202)
T 3gha_A 28 DAPVTVVEFGDYKCPSCKVFNSDIFPKIQKDFIDKGDVKFSFVNV 72 (202)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHTHHHHHHHTTTTTSEEEEEEEC
T ss_pred CCCEEEEEEECCCChhHHHHHHHhhHHHHHHhccCCeEEEEEEec
Confidence 4578888888999999998877764 34444533 4577666543
No 303
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=79.17 E-value=2.6 Score=34.40 Aligned_cols=49 Identities=10% Similarity=0.030 Sum_probs=33.6
Q ss_pred eEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHH-HH-HHcCCEEEEEe
Q 027245 87 AIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKD-VM-DASGVALVLIG 137 (226)
Q Consensus 87 ~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~-~l-~~~Gv~lVaIs 137 (226)
...+++- +.|+.|+.|--+-||+|++..+.+..... ++ +...|+++...
T Consensus 7 ~~~~G~~--~a~vtivef~D~~Cp~C~~~~~~~~~~l~~~~i~~g~v~~v~r~ 57 (205)
T 3gmf_A 7 HHLLGNP--AAKLRLVEFVSYTCPHCSHFEIESEGQLKIGMVQPGKGAIEVRN 57 (205)
T ss_dssp EEEESCT--TCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSEEEEEEE
T ss_pred CceecCC--CCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhccCCeEEEEEEe
Confidence 3445542 56888889999999999998887766444 55 33446666444
No 304
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=78.21 E-value=2.6 Score=35.01 Aligned_cols=42 Identities=7% Similarity=0.063 Sum_probs=29.8
Q ss_pred CCeEEEEEecCCCChhHHHHHHHH-HHhHHHHHH-cCCEEEEEe
Q 027245 96 DRKAVVAFARHFGCVLCRKRADYL-AAKKDVMDA-SGVALVLIG 137 (226)
Q Consensus 96 ~~~vVVvF~R~~~Cp~C~~el~~L-~~~~~~l~~-~Gv~lVaIs 137 (226)
+.|+.|+.|--+.||+|.+.-+.+ .+..+++-+ ..|+++...
T Consensus 38 ~A~vtIvef~Dy~CP~C~~~~~~~~~~l~~~~~~~g~V~~v~~~ 81 (226)
T 3f4s_A 38 KAPILMIEYASLTCYHCSLFHRNVFPKIKEKYIDTGKMLYIFRH 81 (226)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHTHHHHHHHHTTTTSEEEEEEE
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHcccCCeEEEEEEe
Confidence 457888888899999999988765 455556633 346665543
No 305
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=75.48 E-value=9.8 Score=30.12 Aligned_cols=39 Identities=13% Similarity=0.175 Sum_probs=26.4
Q ss_pred eEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEe
Q 027245 98 KAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG 137 (226)
Q Consensus 98 ~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs 137 (226)
++.|.+|.-+.||.|....+.+.++.+ +.+.+++|.-+.
T Consensus 7 ~~~I~~f~D~~CP~C~~~~~~~~~l~~-~~~~~v~v~~~~ 45 (216)
T 2in3_A 7 KPVLWYIADPMCSWCWGFAPVIENIRQ-EYSAFLTVKIMP 45 (216)
T ss_dssp CCEEEEEECTTCHHHHHHHHHHHHHHH-HHTTTCEEEEEE
T ss_pred ceeEEEEECCCCchhhcchHHHHHHHh-cCCCCeEEEEee
Confidence 455777889999999976666666544 434467766553
No 306
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=69.25 E-value=12 Score=30.27 Aligned_cols=43 Identities=5% Similarity=0.106 Sum_probs=34.5
Q ss_pred CeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCC
Q 027245 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGS 140 (226)
Q Consensus 97 ~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~ 140 (226)
.+.++++|-..||..|.+.++.+.+..++++.. +.++.|..+.
T Consensus 131 ~~~~~l~f~~~~~~~~~~~~~~~~~vAk~~k~~-i~F~~vd~~~ 173 (227)
T 4f9z_D 131 IQIHLLLIMNKASPEYEENMHRYQKAAKLFQGK-ILFILVDSGM 173 (227)
T ss_dssp CCEEEEEEECTTSTTHHHHHHHHHHHHHHTTTT-CEEEEEETTS
T ss_pred CceEEEEEEcCCcchHHHHHHHHHHHHHHhhCC-EEEEEeCCcc
Confidence 366777777789999999999999988888754 7778788764
No 307
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=69.06 E-value=13 Score=28.12 Aligned_cols=51 Identities=8% Similarity=-0.016 Sum_probs=31.6
Q ss_pred EEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCC-CHHHHHHHHHHc
Q 027245 100 VVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPG-SVEQARTFSEQT 151 (226)
Q Consensus 100 VVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~-~~~~i~~f~~~~ 151 (226)
||..|-...||.|.-. ..=.+.+.-|+.+||..--|..+ +++.-+++.++.
T Consensus 1 ~V~vYtt~~c~~c~~k-k~c~~aK~lL~~kgV~feEidI~~d~~~r~eM~~~~ 52 (121)
T 1u6t_A 1 VIRVYIASSSGSTAIK-KKQQDVLGFLEANKIGFEEKDIAANEENRKWMRENV 52 (121)
T ss_dssp CEEEEECTTCSCHHHH-HHHHHHHHHHHHTTCCEEEEECTTCHHHHHHHHHHS
T ss_pred CEEEEecCCCCCccch-HHHHHHHHHHHHCCCceEEEECCCCHHHHHHHHHhc
Confidence 3555669999999410 01112234467889998888886 445555566665
No 308
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=68.54 E-value=19 Score=31.09 Aligned_cols=38 Identities=21% Similarity=0.250 Sum_probs=27.0
Q ss_pred eEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeC
Q 027245 98 KAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP 138 (226)
Q Consensus 98 ~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~ 138 (226)
++.|..|...+||+|..--..|.+... +.|+..+.+..
T Consensus 43 ~~~VelyTs~gCp~C~~Ak~lL~~~~~---~~~vi~l~~~v 80 (270)
T 2axo_A 43 KGVVELFTSQGCASCPPADEALRKMIQ---KGDVVGLSYHV 80 (270)
T ss_dssp CCEEEEEECTTCTTCHHHHHHHHHHHH---HTSSEEEEEEC
T ss_pred CcEEEEEeCCCCCChHHHHHHHHHhhc---cCCeeeEEEEE
Confidence 378888999999999987666666544 35665445553
No 309
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=64.37 E-value=19 Score=32.94 Aligned_cols=88 Identities=19% Similarity=0.115 Sum_probs=53.0
Q ss_pred CCccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHh-HHHHHHcCCEEEEEeCCCHHHHH
Q 027245 67 VSEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAK-KDVMDASGVALVLIGPGSVEQAR 145 (226)
Q Consensus 67 ~~~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~-~~~l~~~Gv~lVaIs~~~~~~i~ 145 (226)
+....|..+|+.-|.+ +|+.+++-|++..+.+||.+ .. .. ...+. ....++.|+.|-++..+..
T Consensus 418 ~~~~pG~r~p~~~l~~-~~~~~~~~dl~g~~f~ll~~-~~---~~------~~~~~~~~~~~~~~~~~~~~~~~~~---- 482 (535)
T 3ihg_A 418 PSGRPGFRGPHVLVSR-HGERLSTVDLFGDGWTLLAG-EL---GA------DWVAAAEAVSAELGVPVRAYRVGAG---- 482 (535)
T ss_dssp CCCCTTSBCCCCEEEE-TTEEEEGGGGCSSSEEEEEC-TT---CH------HHHHHHHHHHHHHTCCEEEEEBTTT----
T ss_pred CCCCCCCcCCCceeec-CCceeeHHHhcCCceEEEec-CC---cc------HHHHHHHHHHHhcCCceEEEEeCCc----
Confidence 4456799999999854 58889999999766665542 11 11 11111 1122345655444444321
Q ss_pred HHHHHcCCceeEEecCChHHHHHcCCccccceeecc
Q 027245 146 TFSEQTKFKGEVYADPNHSSYEALSFVSGVLVTFTP 181 (226)
Q Consensus 146 ~f~~~~~~pfpll~Dp~~~ly~alGv~~~~~~t~~p 181 (226)
+.|+++.+.+.+|+..+-...+-|
T Consensus 483 ------------~~d~~~~~~~~~~~~~~~~~lvRP 506 (535)
T 3ihg_A 483 ------------LTDPESAVSERYGIGKAGASLVRP 506 (535)
T ss_dssp ------------BBCSSCCHHHHHTCTTTCEEEECT
T ss_pred ------------cccCcchHHHHhCCCCCceEeeCC
Confidence 578888899999887654443333
No 310
>1w41_A 50S ribosomal protein L30E; electrostatic interactions, thermostability, protein engineering; 1.7A {Thermococcus celer} SCOP: d.79.3.1 PDB: 3n4y_A 3lfo_A 1w40_A 1go0_A 1go1_A 1h7m_A 1w42_A 1w3e_X 3ra6_A 3ra5_A 3n4z_A 2bo1_A
Probab=60.30 E-value=21 Score=25.63 Aligned_cols=52 Identities=6% Similarity=0.045 Sum_probs=40.4
Q ss_pred HHHHHHcCCEEEEEeCCCHH----HHHHHHHHcCCceeEEecCChHHHHHcCCccc
Q 027245 123 KDVMDASGVALVLIGPGSVE----QARTFSEQTKFKGEVYADPNHSSYEALSFVSG 174 (226)
Q Consensus 123 ~~~l~~~Gv~lVaIs~~~~~----~i~~f~~~~~~pfpll~Dp~~~ly~alGv~~~ 174 (226)
.+.++...+.+|.|..|.++ .+..+|+++++|+-.+.+...++-.+.|....
T Consensus 25 ~kai~~gka~lViiA~D~~~~~~~~l~~~c~~~~vp~~~~~~s~~eLG~a~G~~~~ 80 (101)
T 1w41_A 25 IQYAKMGGAKLIIVARNARPDIKEDIEYYARLSGIPVYEFEGTSVELGTLLGRPHT 80 (101)
T ss_dssp HHHHHHTCCSEEEEETTSCHHHHHHHHHHHHHHTCCEEEESSCHHHHHHHTTCSSC
T ss_pred HHHHHcCCCcEEEEeCCCCHHHHHHHHHHHHhcCCCEEEecCCHHHHHHHhCCCCc
Confidence 44566677889999998653 55677888899877776888999999998744
No 311
>3j21_Z 50S ribosomal protein L30E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=59.03 E-value=15 Score=26.32 Aligned_cols=52 Identities=6% Similarity=0.049 Sum_probs=40.9
Q ss_pred HHHHHHcCCEEEEEeCCCHH----HHHHHHHHcCCceeEEecCChHHHHHcCCccc
Q 027245 123 KDVMDASGVALVLIGPGSVE----QARTFSEQTKFKGEVYADPNHSSYEALSFVSG 174 (226)
Q Consensus 123 ~~~l~~~Gv~lVaIs~~~~~----~i~~f~~~~~~pfpll~Dp~~~ly~alGv~~~ 174 (226)
.+.++...+.+|.|..|.++ .+..+|+++++|+-.+.+...++-.+.|....
T Consensus 24 ~kai~~gka~lViiA~D~~~~~~~~i~~~c~~~~ip~~~~~~s~~eLG~a~Gk~~~ 79 (99)
T 3j21_Z 24 IRLAKTGGAKLIIVAKNAPKEIKDDIYYYAKLSDIPVYEFEGTSVELGTLLGKPFV 79 (99)
T ss_dssp HHHHHHTCCSEEEEECCCCHHHHHHHHHHHHHTTCCEEEECCCSCGGGGTTCSTTC
T ss_pred HHHHHcCCccEEEEeCCCCHHHHHHHHHHHHHcCCCEEEeCCCHHHHHHHHCCCCC
Confidence 45566677889999988753 55677889999987787888889999998764
No 312
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=58.36 E-value=12 Score=29.81 Aligned_cols=37 Identities=8% Similarity=0.142 Sum_probs=28.6
Q ss_pred EEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEe
Q 027245 100 VVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG 137 (226)
Q Consensus 100 VVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs 137 (226)
-|.+|.-+.||.|..-.+.|.+..+++. .+++|.-+.
T Consensus 4 ~I~~~~D~~CP~cy~~~~~l~~l~~~~~-~~v~v~~~p 40 (208)
T 3kzq_A 4 KLYYVHDPMCSWCWGYKPTIEKLKQQLP-GVIQFEYVV 40 (208)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHSC-TTSEEEEEE
T ss_pred EEEEEECCCCchhhhhhHHHHHHHHhCC-CCceEEEEe
Confidence 4667889999999998898988887764 357665554
No 313
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=57.93 E-value=29 Score=30.18 Aligned_cols=59 Identities=12% Similarity=0.203 Sum_probs=42.8
Q ss_pred HHHHHHhHHHHHHcCCEEEEEeC--CCHHHHHHHHHHcCCceeEEecCC------hHHHHHcCCccc
Q 027245 116 ADYLAAKKDVMDASGVALVLIGP--GSVEQARTFSEQTKFKGEVYADPN------HSSYEALSFVSG 174 (226)
Q Consensus 116 l~~L~~~~~~l~~~Gv~lVaIs~--~~~~~i~~f~~~~~~pfpll~Dp~------~~ly~alGv~~~ 174 (226)
+.+.-+....+.++|+..|.+-+ .+.+.+++|+++..-+.|++.-+. ..-.+.+|+.+-
T Consensus 169 ~~~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~~i~~~~~~~~P~i~~~~~~~~~~~~eL~~lGv~~v 235 (295)
T 1s2w_A 169 LDEALKRAEAYRNAGADAILMHSKKADPSDIEAFMKAWNNQGPVVIVPTKYYKTPTDHFRDMGVSMV 235 (295)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCCSSSSHHHHHHHHHHTTCSCEEECCSTTTTSCHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHcCCCCCEEEeCCCCCCCCHHHHHHcCCcEE
Confidence 45555666778899999999954 457899999999885567665543 345677888764
No 314
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=57.73 E-value=11 Score=28.33 Aligned_cols=39 Identities=3% Similarity=0.032 Sum_probs=31.7
Q ss_pred HHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCce
Q 027245 117 DYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG 155 (226)
Q Consensus 117 ~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~pf 155 (226)
.++.++.+.+.+.|+.+|+|...+.+..++.+...+++.
T Consensus 61 ~dl~~L~~~l~~~gl~~vGV~g~~~~~~~~~a~~~GLp~ 99 (120)
T 3ghf_A 61 VNWPELHKIVTSTGLRIIGVSGCKDASLKVEIDRMGLPL 99 (120)
T ss_dssp CCHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHHHHcCCEEEEEeCCCcHHHHHHHHHCCCCc
Confidence 357778888899999999999887777778888877753
No 315
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=54.56 E-value=9.4 Score=34.26 Aligned_cols=40 Identities=13% Similarity=0.256 Sum_probs=34.6
Q ss_pred HHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCce
Q 027245 116 ADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG 155 (226)
Q Consensus 116 l~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~pf 155 (226)
.+...++.+.+++.|+.++.||.+..+-++.++++.++.+
T Consensus 223 ~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y 262 (385)
T 4gxt_A 223 LDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNY 262 (385)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSC
T ss_pred CHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCccc
Confidence 4667777888899999999999999999999999987543
No 316
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=54.23 E-value=16 Score=34.07 Aligned_cols=17 Identities=35% Similarity=0.579 Sum_probs=11.8
Q ss_pred ecCCCChhHHHHHHHHH
Q 027245 104 ARHFGCVLCRKRADYLA 120 (226)
Q Consensus 104 ~R~~~Cp~C~~el~~L~ 120 (226)
|-..|||+|.+--..|.
T Consensus 23 y~~~~Cp~C~~~k~~L~ 39 (598)
T 2x8g_A 23 FSKTTCPYCKKVKDVLA 39 (598)
T ss_dssp EECTTCHHHHHHHHHHH
T ss_pred EECCCChhHHHHHHHHH
Confidence 45679999996544444
No 317
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=53.81 E-value=11 Score=33.18 Aligned_cols=35 Identities=11% Similarity=0.145 Sum_probs=30.8
Q ss_pred HHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHc
Q 027245 117 DYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQT 151 (226)
Q Consensus 117 ~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~ 151 (226)
+...++.+.+++.|++|++||.+..+-++.|+++.
T Consensus 146 ~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~ 180 (327)
T 4as2_A 146 SGQRELYNKLMENGIEVYVISAAHEELVRMVAADP 180 (327)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCG
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhc
Confidence 45667788889999999999999999999999873
No 318
>2xry_A Deoxyribodipyrimidine photolyase; DNA damage, DNA repair; HET: FAD; 1.50A {Methanosarcina mazei} PDB: 2xrz_A*
Probab=49.54 E-value=70 Score=29.17 Aligned_cols=75 Identities=11% Similarity=0.017 Sum_probs=50.5
Q ss_pred CeEEEEEecCCCC---h--hHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCceeEEecCC---------
Q 027245 97 RKAVVAFARHFGC---V--LCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYADPN--------- 162 (226)
Q Consensus 97 ~~vVVvF~R~~~C---p--~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~pfpll~Dp~--------- 162 (226)
.+++.+|+.-..- . --.-.+..|+++.++|++.|+.|+.+..+..+.+.++++++++.- |+.+.+
T Consensus 67 ~~v~~vfi~dp~~~~~~~~r~~Fl~~sL~~L~~~L~~~G~~L~v~~g~~~~~l~~l~~~~~~~~-V~~~~~~~~~~~~~~ 145 (482)
T 2xry_A 67 VPVVVVFCLTDEFLEAGIRQYEFMLKGLQELEVSLSRKKIPSFFLRGDPGEKISRFVKDYNAGT-LVTDFSPLRIKNQWI 145 (482)
T ss_dssp SCEEEEEEECTTGGGSCHHHHHHHHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHHTTCSE-EEEECCCSHHHHHHH
T ss_pred CcEEEEEEeChhhhccCHHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHHHHHcCCCE-EEEecccchhHHHHH
Confidence 4676777653321 1 112236678888899999999999887666688999999988763 555533
Q ss_pred hHHHHHcCCc
Q 027245 163 HSSYEALSFV 172 (226)
Q Consensus 163 ~~ly~alGv~ 172 (226)
..+.+++|+.
T Consensus 146 ~~v~~~lgi~ 155 (482)
T 2xry_A 146 EKVISGISIP 155 (482)
T ss_dssp HHHHHHCCSC
T ss_pred HHHHHHcCCE
Confidence 3445667764
No 319
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=48.00 E-value=64 Score=28.15 Aligned_cols=60 Identities=12% Similarity=0.106 Sum_probs=41.5
Q ss_pred HHHHHHhHHHHHHcCCEEEEEe-CCCHHHHHHHHHHcCCceeE-Ee------cCChHHHHHcCCcccc
Q 027245 116 ADYLAAKKDVMDASGVALVLIG-PGSVEQARTFSEQTKFKGEV-YA------DPNHSSYEALSFVSGV 175 (226)
Q Consensus 116 l~~L~~~~~~l~~~Gv~lVaIs-~~~~~~i~~f~~~~~~pfpl-l~------Dp~~~ly~alGv~~~~ 175 (226)
+.+.-+....+.++|+..|.+- ..+.+.+++|+++...|..+ .. ..+.+-.+.+|+.+-.
T Consensus 174 ~~~ai~Ra~ay~eAGAD~i~~e~~~~~~~~~~i~~~~~~P~~~n~~~~g~tp~~~~~eL~~lGv~~v~ 241 (305)
T 3ih1_A 174 LDEAIERANAYVKAGADAIFPEALQSEEEFRLFNSKVNAPLLANMTEFGKTPYYSAEEFANMGFQMVI 241 (305)
T ss_dssp HHHHHHHHHHHHHHTCSEEEETTCCSHHHHHHHHHHSCSCBEEECCTTSSSCCCCHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHHcCCCEEEeecCCCCCCCCCHHHHHHcCCCEEE
Confidence 5555566677889999988884 45568999999998776532 11 1234567888887643
No 320
>3v7q_A Probable ribosomal protein YLXQ; L7AE superfamily, K-turn binding, K-turn RNA, hypothetical R protein, RNA binding protein; HET: CIT; 1.55A {Bacillus subtilis}
Probab=47.65 E-value=74 Score=22.71 Aligned_cols=50 Identities=8% Similarity=0.009 Sum_probs=38.0
Q ss_pred HHHHHHcCCEEEEEeCCCH----HHHHHHHHHcCCceeEEecCChHHHHHcCCcc
Q 027245 123 KDVMDASGVALVLIGPGSV----EQARTFSEQTKFKGEVYADPNHSSYEALSFVS 173 (226)
Q Consensus 123 ~~~l~~~Gv~lVaIs~~~~----~~i~~f~~~~~~pfpll~Dp~~~ly~alGv~~ 173 (226)
.+.++...+.+|.|..|-. ..+..+|+++++|+-.+ ....++-.++|...
T Consensus 28 ~kai~~gka~lViiA~D~~~~~~~~i~~~c~~~~vp~~~~-~s~~eLG~A~Gk~~ 81 (101)
T 3v7q_A 28 IKEIRNARAKLVLLTEDASSNTAKKVTDKCNYYKVPYKKV-ESRAVLGRSIGKEA 81 (101)
T ss_dssp HHHHHTTCCSEEEEETTSCHHHHHHHHHHHHHTTCCEEEE-SCHHHHHHHTTSSC
T ss_pred HHHHhcCceeEEEEeccccccchhhhcccccccCCCeeee-chHHHHHhhhCccc
Confidence 4456666788999988864 35667789999998666 67788999999973
No 321
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=47.17 E-value=36 Score=26.45 Aligned_cols=38 Identities=8% Similarity=-0.114 Sum_probs=31.1
Q ss_pred HHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCc
Q 027245 117 DYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (226)
Q Consensus 117 ~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~p 154 (226)
+...+..+.+++.|+.+++|+.+....++.+.+..++.
T Consensus 95 ~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~ 132 (232)
T 3fvv_A 95 VQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQ 132 (232)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 33444566677899999999999998999999999886
No 322
>3umv_A Deoxyribodipyrimidine photo-lyase; CPD cyclobutane pyrimidine dimers, UV damaged DNA, DNA repai flavoprotein; HET: FAD; 1.71A {Oryza sativa japonica group}
Probab=47.07 E-value=71 Score=29.70 Aligned_cols=63 Identities=17% Similarity=0.030 Sum_probs=44.1
Q ss_pred CeEEEEEecCCC--Ch---h--HHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCceeEEecC
Q 027245 97 RKAVVAFARHFG--CV---L--CRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYADP 161 (226)
Q Consensus 97 ~~vVVvF~R~~~--Cp---~--C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~pfpll~Dp 161 (226)
.+++.+|+.-.. -+ . .+=-+..|+++.++|++.|+.++++.-+..+. .++++++++.- |+.|-
T Consensus 68 ~pVl~vfildp~~~~~~~~~~r~~FL~~sL~dL~~~L~~lG~~L~v~~G~p~~v-~~L~~~~~a~~-V~~d~ 137 (506)
T 3umv_A 68 SPLAVAFALFPRPFLLSARRRQLGFLLRGLRRLAADAAARHLPFFLFTGGPAEI-PALVQRLGAST-LVADF 137 (506)
T ss_dssp CCEEEEEECCCTTCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCTTHH-HHHHHHTTCSE-EEECC
T ss_pred CCEEEEEeccchhhccCCCHHHHHHHHHHHHHHHHHHHHcCCceEEEecChHHH-HHHHHhcCCCE-EEecc
Confidence 478788876443 11 1 12345678888889999999999887666666 99999988764 45563
No 323
>3u5e_c L32, RP73, YL38, 60S ribosomal protein L30; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_f 3izs_f 3o58_Z 3o5h_Z 1t0k_B 3u5i_c 4b6a_c 1ck2_A 1cn7_A 1nmu_B* 3jyw_2
Probab=46.78 E-value=33 Score=24.91 Aligned_cols=53 Identities=13% Similarity=0.117 Sum_probs=41.0
Q ss_pred HHHHHHcCCEEEEEeCCCH----HHHHHHHHHcCCceeEEecCChHHHHHcCCcccc
Q 027245 123 KDVMDASGVALVLIGPGSV----EQARTFSEQTKFKGEVYADPNHSSYEALSFVSGV 175 (226)
Q Consensus 123 ~~~l~~~Gv~lVaIs~~~~----~~i~~f~~~~~~pfpll~Dp~~~ly~alGv~~~~ 175 (226)
.+.++...+.+|.|..|-+ .++..+|+++++|+-.+.+...++-.+.|.....
T Consensus 31 ~kai~~gkaklVilA~D~~~~~~~~i~~~c~~~~ip~~~~~~s~~eLG~A~Gk~~~~ 87 (105)
T 3u5e_c 31 VKSLRQGKSKLIIIAANTPVLRKSELEYYAMLSKTKVYYFQGGNNELGTAVGKLFRV 87 (105)
T ss_dssp HHHHHTTCCSEEEECTTSCHHHHHHHHHHHHHHTCEEEECSSCHHHHHHHTTCSSCC
T ss_pred HHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCCEEEeCCCHHHHHHHhCCcccE
Confidence 4456666688898888864 3677888998888866788889999999987543
No 324
>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*
Probab=46.48 E-value=33 Score=26.32 Aligned_cols=35 Identities=6% Similarity=-0.004 Sum_probs=29.0
Q ss_pred HhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCce
Q 027245 121 AKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKG 155 (226)
Q Consensus 121 ~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~pf 155 (226)
+..+++++.|+.++.++..+...++.+.++.++..
T Consensus 42 ~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~ 76 (180)
T 1k1e_A 42 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL 76 (180)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE
T ss_pred HHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCce
Confidence 45666778999999999998888888999988764
No 325
>3cpq_A 50S ribosomal protein L30E; RNA-protein, elongation factor, ribonucleoprotein, structural genomics, NPPSFA; 1.90A {Methanocaldococcus jannaschii}
Probab=45.57 E-value=42 Score=24.45 Aligned_cols=52 Identities=6% Similarity=-0.086 Sum_probs=40.0
Q ss_pred HHHHHHcCCEEEEEeCCCH----HHHHHHHHHcCCceeEEecCChHHHHHcCCccc
Q 027245 123 KDVMDASGVALVLIGPGSV----EQARTFSEQTKFKGEVYADPNHSSYEALSFVSG 174 (226)
Q Consensus 123 ~~~l~~~Gv~lVaIs~~~~----~~i~~f~~~~~~pfpll~Dp~~~ly~alGv~~~ 174 (226)
...++...+.+|.|..|-+ ..+..+|+++++|+-.+.+...++-.+.|....
T Consensus 30 ~kai~~gka~lViiA~D~~~~~~~~l~~~c~~~~Vp~~~~~~sk~eLG~a~G~~~~ 85 (110)
T 3cpq_A 30 IKFVKHGEGKLVVLAGNIPKDLEEDVKYYAKLSNIPVYQHKITSLELGAVCGKPFP 85 (110)
T ss_dssp HHHHHTTCCSEEEECTTCBHHHHHHHHHHHHHTTCCEEECCSCHHHHHHHTTCSSC
T ss_pred HHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEcCCHHHHHHHhCCccc
Confidence 3445556688999998865 356678888899877776888999999998754
No 326
>4a18_G RPL30; ribosome, eukaryotic initiation factor 6, EIF6, transla large ribosomal subunit, rRNA; 3.52A {Tetrahymena thermophila} PDB: 4a19_G 4a1b_G 4a1d_G 4adx_6
Probab=45.57 E-value=41 Score=24.29 Aligned_cols=52 Identities=10% Similarity=0.065 Sum_probs=40.5
Q ss_pred HHHHHHcCCEEEEEeCCCH----HHHHHHHHHcCCceeEEecCChHHHHHcCCccc
Q 027245 123 KDVMDASGVALVLIGPGSV----EQARTFSEQTKFKGEVYADPNHSSYEALSFVSG 174 (226)
Q Consensus 123 ~~~l~~~Gv~lVaIs~~~~----~~i~~f~~~~~~pfpll~Dp~~~ly~alGv~~~ 174 (226)
.+.++...+.+|.|..|-. ..+..+|++.++|+-.|.+...++-.+.|....
T Consensus 31 ~kai~~gkaklViiA~D~~~~~~~~i~~~c~~~~ip~~~~~~s~~eLG~a~Gk~~~ 86 (104)
T 4a18_G 31 IKAIRNGTAKLVFISNNCPTVRKSEIEYYASLAQISIHHFVGSNVELGTACGKYHR 86 (104)
T ss_dssp HHHHHHTCCCEEEECTTSCHHHHHHHHHHHHHHTCEEEECSSCHHHHHHHTTCSSC
T ss_pred HHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCcEEEecCCHHHHHHHhCCccC
Confidence 4456666788999988854 466778888888876678888999999998764
No 327
>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A
Probab=45.48 E-value=43 Score=26.90 Aligned_cols=41 Identities=10% Similarity=0.185 Sum_probs=32.1
Q ss_pred HHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCceeEEe
Q 027245 119 LAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYA 159 (226)
Q Consensus 119 L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~pfpll~ 159 (226)
..+...++++.|+.++.++-.+...++.+.++.+++.++++
T Consensus 27 ~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~ 67 (227)
T 1l6r_A 27 AIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFG 67 (227)
T ss_dssp HHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEE
T ss_pred HHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCeEEE
Confidence 44455667789999999998888889999999888765443
No 328
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=44.94 E-value=49 Score=22.81 Aligned_cols=53 Identities=9% Similarity=0.092 Sum_probs=39.4
Q ss_pred hHHHHHHcCCEEEEEeCCCH----HHHHHHHHHcCCceeEEecCChHHHHHcCCcccc
Q 027245 122 KKDVMDASGVALVLIGPGSV----EQARTFSEQTKFKGEVYADPNHSSYEALSFVSGV 175 (226)
Q Consensus 122 ~~~~l~~~Gv~lVaIs~~~~----~~i~~f~~~~~~pfpll~Dp~~~ly~alGv~~~~ 175 (226)
....++...+.+|.|..|-. ..+..+|++.++|+-.+. ...++-++.|..+..
T Consensus 19 v~kai~~gkaklViiA~D~~~~~~~~i~~lc~~~~Ip~~~v~-sk~eLG~a~Gk~~~~ 75 (82)
T 3v7e_A 19 TVKALKRGSVKEVVVAKDADPILTSSVVSLAEDQGISVSMVE-SMKKLGKACGIEVGA 75 (82)
T ss_dssp HHHHHTTTCEEEEEEETTSCHHHHHHHHHHHHHHTCCEEEES-CHHHHHHHHTCSSCC
T ss_pred HHHHHHcCCeeEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEC-CHHHHHHHhCCCCCE
Confidence 34556666789999998853 356778899999986654 668888998887653
No 329
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=44.19 E-value=75 Score=27.59 Aligned_cols=74 Identities=12% Similarity=0.071 Sum_probs=46.1
Q ss_pred EEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEe-CCCHHHHHHHHHHcCCceeE--Ee-----cCChHHHHHcCC
Q 027245 100 VVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG-PGSVEQARTFSEQTKFKGEV--YA-----DPNHSSYEALSF 171 (226)
Q Consensus 100 VVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs-~~~~~~i~~f~~~~~~pfpl--l~-----Dp~~~ly~alGv 171 (226)
++|.-|-.-- ..+-+.+--+....+.+.|+.+|.|- ..+.+++++|++....|..+ .. ..+.+-.+.+|+
T Consensus 156 ~~I~ARTDa~--~~~gldeai~Ra~ay~~AGAD~if~~~~~~~ee~~~~~~~~~~Pl~~n~~~~g~tp~~~~~eL~~lGv 233 (298)
T 3eoo_A 156 FVIMARTDAA--AAEGIDAAIERAIAYVEAGADMIFPEAMKTLDDYRRFKEAVKVPILANLTEFGSTPLFTLDELKGANV 233 (298)
T ss_dssp SEEEEEECTH--HHHHHHHHHHHHHHHHHTTCSEEEECCCCSHHHHHHHHHHHCSCBEEECCTTSSSCCCCHHHHHHTTC
T ss_pred eEEEEeehhh--hhcCHHHHHHHHHhhHhcCCCEEEeCCCCCHHHHHHHHHHcCCCeEEEeccCCCCCCCCHHHHHHcCC
Confidence 4555554322 12234444445666788999988884 45689999999998765432 11 123456788898
Q ss_pred cccc
Q 027245 172 VSGV 175 (226)
Q Consensus 172 ~~~~ 175 (226)
.+-.
T Consensus 234 ~~v~ 237 (298)
T 3eoo_A 234 DIAL 237 (298)
T ss_dssp CEEE
T ss_pred eEEE
Confidence 7643
No 330
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=43.97 E-value=72 Score=28.00 Aligned_cols=57 Identities=12% Similarity=0.188 Sum_probs=39.9
Q ss_pred HHHHHHhHHHHHHcCCEEEEEeC-CCHHHHHHHHHHcCCceeEEec---------CChHHHHHcCCccc
Q 027245 116 ADYLAAKKDVMDASGVALVLIGP-GSVEQARTFSEQTKFKGEVYAD---------PNHSSYEALSFVSG 174 (226)
Q Consensus 116 l~~L~~~~~~l~~~Gv~lVaIs~-~~~~~i~~f~~~~~~pfpll~D---------p~~~ly~alGv~~~ 174 (226)
+.+.-+....++++|+..|.+-. -+.+.+++|++...+| ++.. .+.+-.+.+|+.+-
T Consensus 188 l~~ai~Ra~Ay~eAGAd~i~~e~~~~~e~~~~i~~~l~~P--~lan~~~~g~~~~~~~~eL~~lGv~~v 254 (318)
T 1zlp_A 188 LEEGIRRANLYKEAGADATFVEAPANVDELKEVSAKTKGL--RIANMIEGGKTPLHTPEEFKEMGFHLI 254 (318)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCCCSHHHHHHHHHHSCSE--EEEEECTTSSSCCCCHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHhcCCC--EEEEeccCCCCCCCCHHHHHHcCCeEE
Confidence 45555566778899999888854 4568999999997654 4322 24556778888764
No 331
>4e6z_A Apicoplast TIC22, putative; TIC complex, import protein, transport protein; 2.15A {Plasmodium falciparum 3D7}
Probab=43.91 E-value=17 Score=31.53 Aligned_cols=67 Identities=9% Similarity=0.147 Sum_probs=44.7
Q ss_pred CCccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHH-HhHH---HHHHcCCEEEEEeCCCHH
Q 027245 67 VSEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLA-AKKD---VMDASGVALVLIGPGSVE 142 (226)
Q Consensus 67 ~~~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~-~~~~---~l~~~Gv~lVaIs~~~~~ 142 (226)
.-.+-.+.+|-|.+.|.+|.++-..+ .++.+.++|+ +++++.++- +... .-...+++|+.|+-+..-
T Consensus 69 ~I~EKL~~VPVF~Itn~~G~Pll~~~--~~~~V~~fF~-------s~~DA~a~L~el~k~~~~~~~~~~kV~pvsL~kvy 139 (279)
T 4e6z_A 69 PIEEKLEVIPVFLITNYNSSPYIFQE--NEKQVCYMFL-------CPYDAENMLNDMIKYNGMKYNGNIKIHNITMKKAY 139 (279)
T ss_dssp CHHHHSTTSEEEEEECTTCCBCCEEE--TTEEEEEEES-------SHHHHHHHHHHHHHHCHHHHTTSCEEEEEEHHHHH
T ss_pred hHHHHhcCCCEEEEEcCCCCEEEecC--CCCeEEEEEC-------CHHHHHHHHHHHHhccCcccccCceEEEecHHHHH
Confidence 33567888999999999999887654 2445555554 566666553 3221 112468999999987763
No 332
>3ibs_A Conserved hypothetical protein BATB; structural genomics, protein structure, midwest center for S genomics, MCSG, PSI-2; HET: MSE; 2.10A {Bacteroides thetaiotaomicron}
Probab=43.33 E-value=67 Score=24.98 Aligned_cols=22 Identities=14% Similarity=0.345 Sum_probs=16.2
Q ss_pred HHHhHHHHHHcCCEEEEEeCCC
Q 027245 119 LAAKKDVMDASGVALVLIGPGS 140 (226)
Q Consensus 119 L~~~~~~l~~~Gv~lVaIs~~~ 140 (226)
+.+..+.+++.|+.|.+|+.++
T Consensus 128 ~~~~~~~~~~~~i~v~~igig~ 149 (218)
T 3ibs_A 128 AVEAAKAAAEKGIQVSVLGVGM 149 (218)
T ss_dssp HHHHHHHHHTTTEEEEEEEESC
T ss_pred HHHHHHHHHhcCCEEEEEEecC
Confidence 3444556678899999888876
No 333
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=43.28 E-value=47 Score=28.73 Aligned_cols=58 Identities=16% Similarity=0.149 Sum_probs=40.9
Q ss_pred HHHHHHhHHHHHHcCCEEEEEeC--CCHHHHHHHHHHcCCceeEEecC------ChHHHHHcC-Ccc
Q 027245 116 ADYLAAKKDVMDASGVALVLIGP--GSVEQARTFSEQTKFKGEVYADP------NHSSYEALS-FVS 173 (226)
Q Consensus 116 l~~L~~~~~~l~~~Gv~lVaIs~--~~~~~i~~f~~~~~~pfpll~Dp------~~~ly~alG-v~~ 173 (226)
+.+.-+....+.++|+..|.+-. -+.+.+++|+++..-+.|++..+ +-+-.+.+| +.+
T Consensus 165 ~~~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~~i~~~~~~~vP~i~n~~~~~~~~~~eL~~lG~v~~ 231 (290)
T 2hjp_A 165 QQEAVRRGQAYEEAGADAILIHSRQKTPDEILAFVKSWPGKVPLVLVPTAYPQLTEADIAALSKVGI 231 (290)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCCCSSSHHHHHHHHHCCCSSCEEECGGGCTTSCHHHHHTCTTEEE
T ss_pred HHHHHHHHHHHHHcCCcEEEeCCCCCCHHHHHHHHHHcCCCCCEEEeccCCCCCCHHHHHhcCCeeE
Confidence 45555666778899999998866 34689999999987557777542 344466677 654
No 334
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=42.96 E-value=88 Score=26.74 Aligned_cols=60 Identities=10% Similarity=0.082 Sum_probs=43.9
Q ss_pred HHHHHHHhHHHHHHcCCEEEEEeCC-CHHHHHHHHHHcCCceeEEec---CChHHHHHcCCccc
Q 027245 115 RADYLAAKKDVMDASGVALVLIGPG-SVEQARTFSEQTKFKGEVYAD---PNHSSYEALSFVSG 174 (226)
Q Consensus 115 el~~L~~~~~~l~~~Gv~lVaIs~~-~~~~i~~f~~~~~~pfpll~D---p~~~ly~alGv~~~ 174 (226)
.+.+.-+....+.++|+..|.+-.- +.+.+++|+++..+|..+..- .+-+-.+.+|+.+-
T Consensus 166 ~~~~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~~~P~n~~~~~~~~~~~eL~~lGv~~v 229 (275)
T 2ze3_A 166 RLAETVRRGQAYADAGADGIFVPLALQSQDIRALADALRVPLNVMAFPGSPVPRALLDAGAARV 229 (275)
T ss_dssp HHHHHHHHHHHHHHTTCSEEECTTCCCHHHHHHHHHHCSSCEEEECCTTSCCHHHHHHTTCSEE
T ss_pred hHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHhcCCCEEEecCCCCCCHHHHHHcCCcEE
Confidence 4666666677888999998888654 468999999998887655533 24455777888764
No 335
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=42.73 E-value=6.6 Score=35.42 Aligned_cols=20 Identities=5% Similarity=0.165 Sum_probs=12.8
Q ss_pred CCeEEEEEecCCCChhHHHHHH
Q 027245 96 DRKAVVAFARHFGCVLCRKRAD 117 (226)
Q Consensus 96 ~~~vVVvF~R~~~Cp~C~~el~ 117 (226)
..+ |++| -..|||+|.+-..
T Consensus 260 ~~~-VvVY-sk~~CPyC~~Ak~ 279 (362)
T 2jad_A 260 ENE-IFVA-SKTYCPYSHAALN 279 (362)
T ss_dssp TCS-EEEE-ECTTCHHHHHHHH
T ss_pred cCC-EEEE-EcCCCcchHHHHH
Confidence 344 4444 4589999997544
No 336
>2wq7_A RE11660P; lyase-DNA complex, DNA repair, DNA lesion, lyase; HET: TDY Z FAD; 2.00A {Drosophila melanogaster} PDB: 2wb2_A* 2wq6_A* 3cvu_A* 3cvv_A* 3cvy_A* 3cvw_A* 3cvx_A*
Probab=42.02 E-value=55 Score=30.57 Aligned_cols=45 Identities=7% Similarity=0.011 Sum_probs=36.3
Q ss_pred HHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCceeEEec
Q 027245 115 RADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYAD 160 (226)
Q Consensus 115 el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~pfpll~D 160 (226)
.+..|+++.++|++.|..|+.+..+..+.+.++++++++. .|+.+
T Consensus 87 l~~sL~~L~~~L~~~G~~L~v~~g~~~~~l~~l~~~~~~~-~v~~~ 131 (543)
T 2wq7_A 87 LQQTLEDLDNQLRKLNSRLFVVRGKPAEVFPRIFKSWRVE-MLTFE 131 (543)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEESCHHHHHHHHHHHTTEE-EEEEE
T ss_pred HHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCCC-EEEEe
Confidence 4677888889999999999988766668899999998875 35555
No 337
>1dnp_A DNA photolyase; DNA repair, electron transfer, excitation energy transfer, carbon-carbon, lyase (carbon-carbon); HET: DNA FAD MHF; 2.30A {Escherichia coli} SCOP: a.99.1.1 c.28.1.1
Probab=41.82 E-value=59 Score=29.76 Aligned_cols=64 Identities=9% Similarity=0.128 Sum_probs=43.4
Q ss_pred CeEEEEEecCCC------Chh--HHHHHHHHHHhHHHHHHcCCEEEEEeC----CCHHHHHHHHHHcCCceeEEecC
Q 027245 97 RKAVVAFARHFG------CVL--CRKRADYLAAKKDVMDASGVALVLIGP----GSVEQARTFSEQTKFKGEVYADP 161 (226)
Q Consensus 97 ~~vVVvF~R~~~------Cp~--C~~el~~L~~~~~~l~~~Gv~lVaIs~----~~~~~i~~f~~~~~~pfpll~Dp 161 (226)
++++.+|+.-.. ... -.-.+..|+++.++|++.|..|+.+.. +..+.+.++++++++. .|+.|.
T Consensus 28 ~~v~~vfi~dp~~~~~~~~~~~r~~fl~~sL~~L~~~L~~~G~~L~v~~~~~~g~~~~~l~~l~~~~~~~-~v~~~~ 103 (471)
T 1dnp_A 28 ARVLALYIATPRQWATHNMSPRQAELINAQLNGLQIALAEKGIPLLFREVDDFVASVEIVKQVCAENSVT-HLFYNY 103 (471)
T ss_dssp SEEEEEEEECHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCEEEEECSSHHHHHHHHHHHHHHHTCC-EEEEEC
T ss_pred CCEEEEEEECchhhccCCCCHHHHHHHHHHHHHHHHHHHHCCCeEEEEEccCCCCHHHHHHHHHHHcCCC-EEEEec
Confidence 477777775321 111 122466788888999999999999843 3346789999998876 466643
No 338
>1xbi_A 50S ribosomal protein L7AE; alpha-beta-alpha sandwich fold, RNA binding protein/structural protein complex; HET: EPE; 1.45A {Methanocaldococcus jannaschii} SCOP: d.79.3.1 PDB: 1ra4_A* 1sds_A 3paf_A
Probab=40.92 E-value=80 Score=23.35 Aligned_cols=52 Identities=12% Similarity=0.109 Sum_probs=39.8
Q ss_pred hHHHHHHcCCEEEEEeCCC-H----HHHHHHHHHcCCceeEEecCChHHHHHcCCccc
Q 027245 122 KKDVMDASGVALVLIGPGS-V----EQARTFSEQTKFKGEVYADPNHSSYEALSFVSG 174 (226)
Q Consensus 122 ~~~~l~~~Gv~lVaIs~~~-~----~~i~~f~~~~~~pfpll~Dp~~~ly~alGv~~~ 174 (226)
....++...+.+|.|..|- + ..+..+|++.++|+ ++.+...++-++.|....
T Consensus 37 v~kai~~gka~lViiA~D~~p~~~~~~l~~lc~~~~VP~-~~v~sk~eLG~a~G~~~~ 93 (120)
T 1xbi_A 37 VTKAVERGIAKLVIIAEDVKPEEVVAHLPYLCEEKGIPY-AYVASKQDLGKAAGLEVA 93 (120)
T ss_dssp HHHHHHHTCCSEEEEESCCSSGGGTTTHHHHHHHHTCCE-EEESCHHHHHHHTTCSSC
T ss_pred HHHHHHcCCceEEEEcCCCChHHHHHHHHHHHHhcCCCE-EEeCCHHHHHHHhCCCCC
Confidence 3455566668888888764 2 35788999999997 777888999999999844
No 339
>2gjf_A Designed protein; procarboxypeptidase, de novo protein; NMR {}
Probab=40.64 E-value=32 Score=23.19 Aligned_cols=28 Identities=21% Similarity=0.224 Sum_probs=24.9
Q ss_pred EEEEeCCCHHHHHHHHHHcCCceeEEec
Q 027245 133 LVLIGPGSVEQARTFSEQTKFKGEVYAD 160 (226)
Q Consensus 133 lVaIs~~~~~~i~~f~~~~~~pfpll~D 160 (226)
=|.|.++..+..+++.++.+++|.|+.+
T Consensus 50 dI~V~p~~~~~f~~~L~~~~I~y~Vlie 77 (78)
T 2gjf_A 50 VILIPSDMVEWFLEMLKAKGIPFTVYVE 77 (78)
T ss_dssp EEEECTTSHHHHHHHHHHHTCCEEEEEE
T ss_pred EEEECHHHHHHHHHHHHHCCCcEEEEeC
Confidence 4689999999999999999999998865
No 340
>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*
Probab=40.16 E-value=33 Score=26.31 Aligned_cols=41 Identities=10% Similarity=0.008 Sum_probs=31.5
Q ss_pred HHHHHhHHHHHHcCCEEEEEeCC---------------CHHHHHHHHHHcCCceeE
Q 027245 117 DYLAAKKDVMDASGVALVLIGPG---------------SVEQARTFSEQTKFKGEV 157 (226)
Q Consensus 117 ~~L~~~~~~l~~~Gv~lVaIs~~---------------~~~~i~~f~~~~~~pfpl 157 (226)
+...+..+++++.|+.+++++.. ..+.++...+..++.|+.
T Consensus 45 pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd~ 100 (176)
T 2fpr_A 45 PGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFDE 100 (176)
T ss_dssp TTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred ccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCCeeE
Confidence 44555666777889999999987 456778888898988863
No 341
>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}
Probab=39.66 E-value=74 Score=24.41 Aligned_cols=53 Identities=8% Similarity=0.206 Sum_probs=36.2
Q ss_pred hHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCc--ee--EEec------CC----hHHHHHcCCccc
Q 027245 122 KKDVMDASGVALVLIGPGSVEQARTFSEQTKFK--GE--VYAD------PN----HSSYEALSFVSG 174 (226)
Q Consensus 122 ~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~p--fp--ll~D------p~----~~ly~alGv~~~ 174 (226)
..+.+++.|+.+++++.++...++...+..++. |+ +.+| |+ ..+.+.+|+...
T Consensus 111 ~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~ 177 (231)
T 3kzx_A 111 LLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFDSIIGSGDTGTIKPSPEPVLAALTNINIEPS 177 (231)
T ss_dssp HHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEETSSSCCTTSSHHHHHHHHHHTCCCS
T ss_pred HHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhheeeEEcccccCCCCCChHHHHHHHHHcCCCcc
Confidence 345677889999999988888888888888864 44 3333 22 244566777654
No 342
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=39.33 E-value=78 Score=26.97 Aligned_cols=64 Identities=8% Similarity=-0.039 Sum_probs=41.6
Q ss_pred eEEEEEecCCCChhHHHHHHHHHHhHHHHHH-cCCEEEEEeCCCHHHHHH-HHHHcCCc--ee--EEecC
Q 027245 98 KAVVAFARHFGCVLCRKRADYLAAKKDVMDA-SGVALVLIGPGSVEQART-FSEQTKFK--GE--VYADP 161 (226)
Q Consensus 98 ~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~-~Gv~lVaIs~~~~~~i~~-f~~~~~~p--fp--ll~Dp 161 (226)
+..+++|-..+|+.|.+....|.+...+++. ..+..+.|.++....+.. |.+.+++. +| ++.|+
T Consensus 246 ~~~~l~f~~~~~~~~~~~~~~~~~vA~~~~~~~~~~f~~id~~~~~~~~~~~~~~~gi~~~~P~~~i~~~ 315 (350)
T 1sji_A 246 GIHIVAFAERSDPDGYEFLEILKQVARDNTDNPDLSIVWIDPDDFPLLVAYWEKTFKIDLFKPQIGVVNV 315 (350)
T ss_dssp SEEEEEECCTTSHHHHHHHHHHHHHHHHGGGCSSCCEEEECGGGCHHHHHHHHHHCCSCTTSCEEEEEES
T ss_pred CcEEEEEEcCCCccHHHHHHHHHHHHHHhCCCCceEEEEECchhhHHHHHHHHhhcCCCccCCcEEEEec
Confidence 3344456678999999999999999888873 467777777765432221 22455543 34 45565
No 343
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=39.33 E-value=30 Score=26.64 Aligned_cols=42 Identities=7% Similarity=0.069 Sum_probs=32.3
Q ss_pred HHHhHHHHHHcCCEEEEEeCCC---HHHHHHHHHHcCCceeEEec
Q 027245 119 LAAKKDVMDASGVALVLIGPGS---VEQARTFSEQTKFKGEVYAD 160 (226)
Q Consensus 119 L~~~~~~l~~~Gv~lVaIs~~~---~~~i~~f~~~~~~pfpll~D 160 (226)
..+...++++.|..|+.++.-+ ...+..|.++++++++++.+
T Consensus 29 ~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~~~~I~~ 73 (142)
T 2obb_A 29 AVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLEFYAANK 73 (142)
T ss_dssp HHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCCCSEESS
T ss_pred HHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCCeEEEEc
Confidence 3455566778999988887655 46788999999999986665
No 344
>2l69_A Rossmann 2X3 fold protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=39.13 E-value=1.1e+02 Score=22.44 Aligned_cols=74 Identities=18% Similarity=0.164 Sum_probs=44.6
Q ss_pred HHHHhHHHH-HHcCCEEEEEeCCCH---HHHHHHHHHcCCcee-EEecCChHHHHHcCC---ccccce-e-ecchhhHHH
Q 027245 118 YLAAKKDVM-DASGVALVLIGPGSV---EQARTFSEQTKFKGE-VYADPNHSSYEALSF---VSGVLV-T-FTPKAGLKI 187 (226)
Q Consensus 118 ~L~~~~~~l-~~~Gv~lVaIs~~~~---~~i~~f~~~~~~pfp-ll~Dp~~~ly~alGv---~~~~~~-t-~~p~a~~~~ 187 (226)
+|.+..+++ ++-++.+|+|..|+. +.+-.|.+..|...- |+.|.|..-.+.|.- .+|+.. + .+|....+.
T Consensus 37 elkdsieelvkkynativvvvvddkewaekairfvkslgaqvliiiydqdqnrleefsrevrrrgfevrtvtspddfkks 116 (134)
T 2l69_A 37 ELKDSIEELVKKYNATIVVVVVDDKEWAEKAIRFVKSLGAQVLIIIYDQDQNRLEEFSREVRRRGFEVRTVTSPDDFKKS 116 (134)
T ss_dssp HHHHHHHHHTTCCCCEEEEEECSSHHHHHHHHHHHHHHCCCCEEEEECSCHHHHHHHHHHHHHTTCCEEEESSHHHHHHH
T ss_pred HHHHHHHHHHHHhCCeEEEEEEccHHHHHHHHHHHHhcCCeEEEEEEeCchhHHHHHHHHHHhcCceEEEecChHHHHHH
Confidence 444444444 456888999999886 456678899888754 778988765544432 123222 2 256555554
Q ss_pred HHHH
Q 027245 188 IQSY 191 (226)
Q Consensus 188 ~~~~ 191 (226)
+..+
T Consensus 117 lerl 120 (134)
T 2l69_A 117 LERL 120 (134)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
No 345
>4ev1_A Anabena TIC22; TIC22 fold, chaperon, protein transport, TIC22-like family, thylakoids, chaperone; HET: NHE; 1.95A {Anabaena SP}
Probab=38.94 E-value=44 Score=28.52 Aligned_cols=85 Identities=9% Similarity=0.062 Sum_probs=49.3
Q ss_pred cccCcCCCcEEecCCCCeEeCCCccC------CCeEEEEEecCCCChhHHHHHHHHHHh-H------HHHH--HcCCEEE
Q 027245 70 DTKNLLDTVKVYDVNGNAIPISDLWK------DRKAVVAFARHFGCVLCRKRADYLAAK-K------DVMD--ASGVALV 134 (226)
Q Consensus 70 ~~g~~apdf~L~D~~G~~v~Lsdl~~------~~~vVVvF~R~~~Cp~C~~el~~L~~~-~------~~l~--~~Gv~lV 134 (226)
+..+.+|-|.+.|.+|..+-...--. ++.+..+|| +++++.++-+. . +.+. ..+++|+
T Consensus 9 ekL~~VPVF~Itn~~G~Pll~~~~~~~~~~~~~~~V~~~F~-------s~~dA~~~L~~lk~~~~~np~~~~~~~~~kV~ 81 (252)
T 4ev1_A 9 EKLDSVPIYLVTNEKGLPLSRPLPNAPNGQKAGGSITGAYM-------SRQEAQAFINELRNAKNKDPKMQEIVKSLQVT 81 (252)
T ss_dssp HHHTTSEEEEEECTTCCBCEEECCCCTTSCCSCSEEEEEES-------CHHHHHHHHHHHHHCSSCCHHHHHHHTTCEEE
T ss_pred HHhcCCcEEEEECCCCCeEEEecCCccccccCCCeEEEEEe-------cHHHHHHHHHHHHhccccCchhhhhccCceEE
Confidence 34567899999999999877654211 234555554 45555444432 2 2111 3579999
Q ss_pred EEeCCCHHHHHHHH--HHcCCceeEEecC
Q 027245 135 LIGPGSVEQARTFS--EQTKFKGEVYADP 161 (226)
Q Consensus 135 aIs~~~~~~i~~f~--~~~~~pfpll~Dp 161 (226)
.|+-+..-++.+-- +..++-|.++.|+
T Consensus 82 ~vsL~~vyql~~~~~~k~~~l~F~fvP~~ 110 (252)
T 4ev1_A 82 AVPLGVIYQQLQQTKKDPNRLLFAFKPVD 110 (252)
T ss_dssp EEEHHHHHHHHHHTTTCTTCEEEEEECCH
T ss_pred EeeHHHHHHHHHhhccCCcCceEEEcCCH
Confidence 99998764442211 2223556666554
No 346
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A*
Probab=38.49 E-value=62 Score=25.08 Aligned_cols=58 Identities=7% Similarity=0.002 Sum_probs=35.9
Q ss_pred CCc-EEecCCCCeEeCCCccC--CCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeC
Q 027245 76 DTV-KVYDVNGNAIPISDLWK--DRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP 138 (226)
Q Consensus 76 pdf-~L~D~~G~~v~Lsdl~~--~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~ 138 (226)
.++ .+.+.+|..+....+.. +.+.+|+|+.+.++..- .+....+.+.+.|..|+++..
T Consensus 17 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~vv~~hG~~~~~~-----~~~~~~~~l~~~g~~v~~~d~ 77 (303)
T 3pe6_A 17 QDLPHLVNADGQYLFCRYWAPTGTPKALIFVSHGAGEHSG-----RYEELARMLMGLDLLVFAHDH 77 (303)
T ss_dssp GGSCEEECTTSCEEEEEEECCSSCCSEEEEEECCTTCCGG-----GGHHHHHHHHHTTEEEEEECC
T ss_pred CCCCeEecCCCeEEEEEEeccCCCCCeEEEEECCCCchhh-----HHHHHHHHHHhCCCcEEEeCC
Confidence 344 67778888777644321 23567777777665332 223345566677999999964
No 347
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=38.48 E-value=49 Score=24.43 Aligned_cols=55 Identities=11% Similarity=0.021 Sum_probs=36.9
Q ss_pred HHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCceeE-EecCChH----HHHHcCCccc
Q 027245 120 AAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEV-YADPNHS----SYEALSFVSG 174 (226)
Q Consensus 120 ~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~pfpl-l~Dp~~~----ly~alGv~~~ 174 (226)
.+..+++++.|+.++.++..+...++.+.++.++...+ ..-|+.. +.+.+|+...
T Consensus 42 ~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~~~kp~~~~~~~~~~~~~~~~~ 101 (162)
T 2p9j_A 42 GIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEEIYTGSYKKLEIYEKIKEKYSLKDE 101 (162)
T ss_dssp HHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCEEEECC--CHHHHHHHHHHTTCCGG
T ss_pred HHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHhhccCCCCCHHHHHHHHHHcCCCHH
Confidence 45566777889999999999888899999998875311 1124444 3455676543
No 348
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=38.47 E-value=1.1e+02 Score=26.59 Aligned_cols=74 Identities=15% Similarity=0.002 Sum_probs=45.5
Q ss_pred EEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEe-CCCHHHHHHHHHHcC-CceeE--Ee-----cCChHHHHHc
Q 027245 99 AVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG-PGSVEQARTFSEQTK-FKGEV--YA-----DPNHSSYEAL 169 (226)
Q Consensus 99 vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs-~~~~~~i~~f~~~~~-~pfpl--l~-----Dp~~~ly~al 169 (226)
-++|.-|-.- . ...-+.+--+....+.++|+..|.|- ..+.++++++++... +|..+ +. ..+-+-.+.+
T Consensus 162 d~~I~ARTDa-~-~~~gldeAi~Ra~ay~eAGAD~ifi~~~~~~~~~~~i~~~~~~~Pv~~n~~~~g~~p~~t~~eL~~l 239 (307)
T 3lye_A 162 DFVLIARTDA-L-QSLGYEECIERLRAARDEGADVGLLEGFRSKEQAAAAVAALAPWPLLLNSVENGHSPLITVEEAKAM 239 (307)
T ss_dssp CCEEEEEECC-H-HHHCHHHHHHHHHHHHHTTCSEEEECCCSCHHHHHHHHHHHTTSCBEEEEETTSSSCCCCHHHHHHH
T ss_pred CeEEEEechh-h-hccCHHHHHHHHHHHHHCCCCEEEecCCCCHHHHHHHHHHccCCceeEEeecCCCCCCCCHHHHHHc
Confidence 3555556432 1 12224444445566778999988774 456789999999975 55532 21 1234457788
Q ss_pred CCccc
Q 027245 170 SFVSG 174 (226)
Q Consensus 170 Gv~~~ 174 (226)
|+.+-
T Consensus 240 Gv~~v 244 (307)
T 3lye_A 240 GFRIM 244 (307)
T ss_dssp TCSEE
T ss_pred CCeEE
Confidence 98765
No 349
>2fc3_A 50S ribosomal protein L7AE; alpha-beta-alpha sandwich, ribosome, RNA binding protein; 1.56A {Aeropyrum pernix} SCOP: d.79.3.1 PDB: 3pla_C* 3id5_C* 3hax_D* 2hvy_D* 3hay_D* 3nvi_B 3nmu_C 3nvk_E* 3lwr_C 3lwo_C* 3lwq_C* 3lwp_C 3lwv_C 3hjw_C* 2czw_A 1pxw_A
Probab=38.25 E-value=1.2e+02 Score=22.46 Aligned_cols=50 Identities=16% Similarity=0.151 Sum_probs=38.4
Q ss_pred HHHHHcCCEEEEEeCCC-H----HHHHHHHHHcCCceeEEecCChHHHHHcCCccc
Q 027245 124 DVMDASGVALVLIGPGS-V----EQARTFSEQTKFKGEVYADPNHSSYEALSFVSG 174 (226)
Q Consensus 124 ~~l~~~Gv~lVaIs~~~-~----~~i~~f~~~~~~pfpll~Dp~~~ly~alGv~~~ 174 (226)
..++...+.+|.|..|- + ..+..+|++.++|+ ++.+...++-.+.|..+.
T Consensus 38 kal~~gka~lViiA~D~~~~~~~~~l~~lc~~~~Vp~-~~v~sk~eLG~a~G~~~~ 92 (124)
T 2fc3_A 38 KAVERGLAKLVVIAEDVDPPEIVMHLPLLCDEKKIPY-VYVPSKKRLGEAAGIEVA 92 (124)
T ss_dssp HHHHTTCCSEEEEETTCSSGGGTTTHHHHHHHTTCCE-EEESCHHHHHHHTTCSSC
T ss_pred HHHHcCCceEEEEcCCCChHHHHHHHHHHHHHcCCCE-EEECCHHHHHHHhCCCCC
Confidence 44555667888888764 2 35788999999997 777888999999999843
No 350
>3on1_A BH2414 protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, unknown function; HET: MSE; 1.65A {Bacillus halodurans}
Probab=37.81 E-value=1.1e+02 Score=21.74 Aligned_cols=49 Identities=8% Similarity=0.020 Sum_probs=37.4
Q ss_pred HHHHHHcCCEEEEEeCCCH----HHHHHHHHHcCCceeEEecCChHHHHHcCCc
Q 027245 123 KDVMDASGVALVLIGPGSV----EQARTFSEQTKFKGEVYADPNHSSYEALSFV 172 (226)
Q Consensus 123 ~~~l~~~Gv~lVaIs~~~~----~~i~~f~~~~~~pfpll~Dp~~~ly~alGv~ 172 (226)
.+.++...+.+|.|..|-. ..+..+|+++++|+- +.+...++-.+.|..
T Consensus 27 ~kai~~gka~lViiA~D~~~~~~~~i~~~c~~~~ip~~-~~~s~~eLG~a~Gk~ 79 (101)
T 3on1_A 27 VKAVQNGQVTLVILSSDAGIHTKKKLLDKCGSYQIPVK-VVGNRQMLGRAIGKH 79 (101)
T ss_dssp HHHHHTTCCSEEEEETTSCHHHHHHHHHHHHHHTCCEE-EESCHHHHHHHTTSS
T ss_pred HHHHHcCCCcEEEEeCCCCHHHHHHHHHHHHHcCCCEE-EeCCHHHHHHHhCCc
Confidence 4455666688998988854 356677899999876 457888899999996
No 351
>2j07_A Deoxyribodipyrimidine photo-lyase; flavoprotein, nucleotide-binding, DNA repair; HET: FAD HDF; 1.95A {Thermus thermophilus} SCOP: a.99.1.1 c.28.1.1 PDB: 1iqu_A* 1iqr_A* 2j08_A* 2j09_A*
Probab=37.48 E-value=60 Score=29.22 Aligned_cols=56 Identities=25% Similarity=0.199 Sum_probs=42.1
Q ss_pred HHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCceeEEecCC---------hHHHHHcCC
Q 027245 115 RADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYADPN---------HSSYEALSF 171 (226)
Q Consensus 115 el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~pfpll~Dp~---------~~ly~alGv 171 (226)
.+..|+++.++|++.|+.++.+..+..+.+.++++++++.- |+.|.+ ..+.+.+|+
T Consensus 50 l~~sL~~l~~~L~~~g~~l~~~~g~~~~~l~~l~~~~~~~~-v~~~~~~~~~~~~rd~~v~~~l~i 114 (420)
T 2j07_A 50 FLENVRALREAYRARGGALWVLEGLPWEKVPEAARRLKAKA-VYALTSHTPYGRYRDGRVREALPV 114 (420)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHHTTCSE-EEEECCCSHHHHHHHHHHHHHCSS
T ss_pred HHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCCCE-EEEecccChhHHHHHHHHHHHcCC
Confidence 46678888899999999999887666688999999998863 666433 455555554
No 352
>3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens}
Probab=37.00 E-value=79 Score=25.63 Aligned_cols=60 Identities=7% Similarity=-0.013 Sum_probs=37.1
Q ss_pred cCCCc-EEecCCCCeEeCCCcc--CCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeC
Q 027245 74 LLDTV-KVYDVNGNAIPISDLW--KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP 138 (226)
Q Consensus 74 ~apdf-~L~D~~G~~v~Lsdl~--~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~ 138 (226)
...++ .+.+.+|..+....+. ++.+.+|+|+.+.++..- .+....+.|.+.|..|+++..
T Consensus 33 ~~~~~~~~~~~dg~~l~~~~~~p~~~~~p~vv~~HG~~~~~~-----~~~~~~~~l~~~g~~vi~~D~ 95 (342)
T 3hju_A 33 PYQDLPHLVNADGQYLFCRYWKPTGTPKALIFVSHGAGEHSG-----RYEELARMLMGLDLLVFAHDH 95 (342)
T ss_dssp BTTSSCEEECTTSCEEEEEEECCSSCCSEEEEEECCTTCCGG-----GGHHHHHHHHTTTEEEEEECC
T ss_pred ccccCceEEccCCeEEEEEEeCCCCCCCcEEEEECCCCcccc-----hHHHHHHHHHhCCCeEEEEcC
Confidence 34455 6778888877654332 123457777777665432 233445566777999999954
No 353
>3iz5_f 60S ribosomal protein L30 (L30E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_f
Probab=36.83 E-value=55 Score=24.14 Aligned_cols=52 Identities=12% Similarity=0.049 Sum_probs=40.9
Q ss_pred HHHHHHcCCEEEEEeCCCH----HHHHHHHHHcCCceeEEecCChHHHHHcCCccc
Q 027245 123 KDVMDASGVALVLIGPGSV----EQARTFSEQTKFKGEVYADPNHSSYEALSFVSG 174 (226)
Q Consensus 123 ~~~l~~~Gv~lVaIs~~~~----~~i~~f~~~~~~pfpll~Dp~~~ly~alGv~~~ 174 (226)
.+.++...+.+|.|..|-+ .++..+|+.+++|+-.+.+...++-.+.|....
T Consensus 35 ~kai~~gkakLVilA~D~~~~~~~~i~~~c~~~~ipv~~~~~s~~eLG~A~Gk~~~ 90 (112)
T 3iz5_f 35 LKTLRSSLGKLIILANNCPPLRKSEIETYAMLAKISVHHFHGNNVDLGTACGKYYR 90 (112)
T ss_dssp HHHHHTTCCSEEEECSCCCHHHHHHHHHHHHHTTCCEECCCCTTCTHHHHHCTTCS
T ss_pred HHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCcEEEeCCCHHHHHHHhCCccc
Confidence 4456666688999988864 367778999999887776888999999999754
No 354
>2r47_A Uncharacterized protein MTH_862; unknown function, structural genomics, APC5901, PSI-2; 1.88A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=35.65 E-value=22 Score=28.34 Aligned_cols=83 Identities=6% Similarity=0.003 Sum_probs=58.1
Q ss_pred CCCcEEecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCc
Q 027245 75 LDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (226)
Q Consensus 75 apdf~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~p 154 (226)
+-.+.+.|. -+.+.++-..++-+||.+-+---|.+.-...+.+++.+++.+.+-.||+|.--+.-+-+.|.++ ++
T Consensus 65 a~~l~~~~~---G~~~~~~~~~~~D~vVllGGLAMPk~~v~~e~v~~li~ki~~~~~kiiGvCFms~F~kagW~~~--Id 139 (157)
T 2r47_A 65 ARKLEVTEY---GVELGEISPGNVDVLVLLGGLSMPGIGSDIEDVKKLVEDALEEGGELMGLCYMDMFARAGWYEL--LD 139 (157)
T ss_dssp CEEEEEETT---EEEEEEECCCCEEEEEEEGGGGSTTTSCCHHHHHHHHHHHEEEEEEEEEEEETTHHHHTTHHHH--SC
T ss_pred ceEEEEecC---ceEeccccCCCCCEEEEeccccCCCCCCCHHHHHHHHHHhhcCCCCEEEEEhHHHHHHcCCCcc--CC
Confidence 334555552 3444444324677888888777777766677788877777556778999999999888888887 66
Q ss_pred eeEEecCC
Q 027245 155 GEVYADPN 162 (226)
Q Consensus 155 fpll~Dp~ 162 (226)
|+.+.|.+
T Consensus 140 FD~iID~~ 147 (157)
T 2r47_A 140 FDCVINAD 147 (157)
T ss_dssp CSEEEEEE
T ss_pred ccEEEEcc
Confidence 77777643
No 355
>1vq8_F 50S ribosomal protein L7AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.79.3.1 PDB: 1vq4_F* 1vq5_F* 1vq6_F* 1vq7_F* 1s72_F* 1vq9_F* 1vqk_F* 1vql_F* 1vqm_F* 1vqn_F* 1vqo_F* 1vqp_F* 1yhq_F* 1yi2_F* 1yij_F* 1yit_F* 1yj9_F* 1yjn_F* 1yjw_F* 2otj_F* ...
Probab=35.36 E-value=1.2e+02 Score=22.30 Aligned_cols=51 Identities=8% Similarity=0.179 Sum_probs=38.8
Q ss_pred HHHHHHcCCEEEEEeCCC-H----HHHHHHHHHcCCceeEEecCChHHHHHcCCccc
Q 027245 123 KDVMDASGVALVLIGPGS-V----EQARTFSEQTKFKGEVYADPNHSSYEALSFVSG 174 (226)
Q Consensus 123 ~~~l~~~Gv~lVaIs~~~-~----~~i~~f~~~~~~pfpll~Dp~~~ly~alGv~~~ 174 (226)
...++...+.+|.|..|- + ..+..+|++.++|+ ++.+...++-.+.|..+.
T Consensus 38 ~kal~~gka~lViiA~D~~~~~~~~~l~~lc~~~~Vp~-~~~~sk~eLG~a~G~~~~ 93 (120)
T 1vq8_F 38 TKSIERGSAELVFVAEDVQPEEIVMHIPELADEKGVPF-IFVEQQDDLGHAAGLEVG 93 (120)
T ss_dssp HHHHHHTCCSEEEEESCCSSGGGTTTHHHHHHTTCCCE-EEESCHHHHHHHTTCSSC
T ss_pred HHHHHcCCceEEEEeCCCChHHHHHHHHHHHHhcCCCE-EEECCHHHHHHHhCCCCC
Confidence 344555667888888764 2 35788999999997 777888999999999844
No 356
>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0
Probab=35.33 E-value=64 Score=20.36 Aligned_cols=61 Identities=16% Similarity=0.233 Sum_probs=35.2
Q ss_pred EEEEecCCCChhHHHHHHHHHHhHHHHHHcCCE----EEEEe--CC--CHHHHHHHHHHcCCceeEEec
Q 027245 100 VVAFARHFGCVLCRKRADYLAAKKDVMDASGVA----LVLIG--PG--SVEQARTFSEQTKFKGEVYAD 160 (226)
Q Consensus 100 VVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~----lVaIs--~~--~~~~i~~f~~~~~~pfpll~D 160 (226)
+.+.+.+..|..|...+...-+..+-.....+. .+.|. .+ +.+.+.+-.++.|++-.++.|
T Consensus 4 ~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 72 (74)
T 3dxs_X 4 IQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEEIEDAGFEAEILAE 72 (74)
T ss_dssp EEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEEEEEE
T ss_pred EEEEECCcCCHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceEEccC
Confidence 456778999999987665443322211111111 12232 22 456777778888888777766
No 357
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=34.05 E-value=1.1e+02 Score=26.54 Aligned_cols=59 Identities=7% Similarity=0.046 Sum_probs=41.0
Q ss_pred HHHHHHhHHHHHHcCCEEEEEeCC-CHHHHHHHHHHcCCcee--EEe-----cCChHHHHHcCCccc
Q 027245 116 ADYLAAKKDVMDASGVALVLIGPG-SVEQARTFSEQTKFKGE--VYA-----DPNHSSYEALSFVSG 174 (226)
Q Consensus 116 l~~L~~~~~~l~~~Gv~lVaIs~~-~~~~i~~f~~~~~~pfp--ll~-----Dp~~~ly~alGv~~~ 174 (226)
+.+.-+....++++|+..|.+-.- +.+.++++++....|.- +.. ..+.+-.+.+|+.+-
T Consensus 166 l~~ai~ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~~iP~~~N~~~~g~~p~~~~~eL~~~G~~~v 232 (295)
T 1xg4_A 166 LDAAIERAQAYVEAGAEMLFPEAITELAMYRQFADAVQVPILANITEFGATPLFTTDELRSAHVAMA 232 (295)
T ss_dssp HHHHHHHHHHHHHTTCSEEEETTCCSHHHHHHHHHHHCSCBEEECCSSSSSCCCCHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHcCCCEEEEecccCCCCCCCHHHHHHcCCCEE
Confidence 455555667788999998888554 46899999999887642 221 234566778888764
No 358
>2pib_A Phosphorylated carbohydrates phosphatase TM_1254; 3D-structure, structural genomics, NPPSFA; HET: MSE GOL; 1.73A {Thermotoga maritima MSB8} PDB: 3kbb_A*
Probab=34.02 E-value=63 Score=24.05 Aligned_cols=77 Identities=16% Similarity=0.188 Sum_probs=46.9
Q ss_pred HhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCc--eeEE--ec------CCh----HHHHHcCCccccceeecchhhHH
Q 027245 121 AKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK--GEVY--AD------PNH----SSYEALSFVSGVLVTFTPKAGLK 186 (226)
Q Consensus 121 ~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~p--fpll--~D------p~~----~ly~alGv~~~~~~t~~p~a~~~ 186 (226)
+..+++++.|+.+++++.++.+.++...+..++. |..+ +| |+. .+.+.+|+.......+. .....
T Consensus 91 ~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~iG-D~~~D 169 (216)
T 2pib_A 91 EALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFDVMVFGDQVKNGKPDPEIYLLVLERLNVVPEKVVVFE-DSKSG 169 (216)
T ss_dssp HHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECGGGSSSCTTSTHHHHHHHHHHTCCGGGEEEEE-CSHHH
T ss_pred HHHHHHHHCCCCEEEEeCCcHHhHHHHHHhcChHHhcCEEeecccCCCCCcCcHHHHHHHHHcCCCCceEEEEe-CcHHH
Confidence 3456677899999999999988888888888876 5432 22 232 35666777654333332 22333
Q ss_pred HHHHHHhhhccc
Q 027245 187 IIQSYMEGYRQD 198 (226)
Q Consensus 187 ~~~~~~~G~r~~ 198 (226)
+--+...|++..
T Consensus 170 i~~a~~aG~~~i 181 (216)
T 2pib_A 170 VEAAKSAGIERI 181 (216)
T ss_dssp HHHHHHTTCCEE
T ss_pred HHHHHHcCCcEE
Confidence 333333555544
No 359
>1np7_A DNA photolyase; protein with FAD cofactor; HET: DNA FAD; 1.90A {Synechocystis SP} SCOP: a.99.1.1 c.28.1.1
Probab=32.29 E-value=65 Score=29.48 Aligned_cols=45 Identities=11% Similarity=0.124 Sum_probs=36.6
Q ss_pred HHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCceeEEec
Q 027245 115 RADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYAD 160 (226)
Q Consensus 115 el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~pfpll~D 160 (226)
.+..|+++.++|++.|..|+.+..+..+.+.++++++++. .|+.+
T Consensus 63 l~~sL~~L~~~L~~~G~~L~v~~g~~~~~l~~l~~~~~~~-~V~~~ 107 (489)
T 1np7_A 63 LQQSVQNLAESLQKVGNKLLVTTGLPEQVIPQIAKQINAK-TIYYH 107 (489)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHHTTEE-EEEEE
T ss_pred HHHHHHHHHHHHHHCCCcEEEEECCHHHHHHHHHHHcCCC-EEEEe
Confidence 4677888889999999999988766668899999998875 36666
No 360
>1owl_A Photolyase, deoxyribodipyrimidine photolyase; DNA repair, flavin enzyme, photoreactivating enzyme; HET: FAD; 1.80A {Synechococcus elongatus} SCOP: a.99.1.1 c.28.1.1 PDB: 1owm_A* 1own_A* 1owo_A* 1owp_A* 1qnf_A* 1tez_A*
Probab=32.17 E-value=72 Score=29.23 Aligned_cols=46 Identities=15% Similarity=0.210 Sum_probs=37.1
Q ss_pred HHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCceeEEecC
Q 027245 115 RADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYADP 161 (226)
Q Consensus 115 el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~pfpll~Dp 161 (226)
.+..|+++.++|++.|..|+.+..+..+.+.++++++++.- |+.+.
T Consensus 55 l~~sL~~L~~~L~~~G~~L~v~~g~~~~~l~~l~~~~~~~~-v~~~~ 100 (484)
T 1owl_A 55 LQGCLQELQQRYQQAGSRLLLLQGDPQHLIPQLAQQLQAEA-VYWNQ 100 (484)
T ss_dssp HHHHHHHHHHHHHHHTSCEEEEESCHHHHHHHHHHHTTCSE-EEEEC
T ss_pred HHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCCCE-EEEec
Confidence 46678888899999999999987666688999999988864 66643
No 361
>2aif_A Ribosomal protein L7A; high-mobility like protein, transcription factor, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum} SCOP: d.79.3.1
Probab=32.16 E-value=1.2e+02 Score=22.88 Aligned_cols=51 Identities=10% Similarity=0.051 Sum_probs=38.4
Q ss_pred HHHHHcCCEEEEEeCCCH-----HHHHHHHHHcCCceeEEecCChHHHHHcCCcccc
Q 027245 124 DVMDASGVALVLIGPGSV-----EQARTFSEQTKFKGEVYADPNHSSYEALSFVSGV 175 (226)
Q Consensus 124 ~~l~~~Gv~lVaIs~~~~-----~~i~~f~~~~~~pfpll~Dp~~~ly~alGv~~~~ 175 (226)
+.++...+.+|.|..|-. ..+..+|+++++|+- +.+...++-.+.|..+..
T Consensus 51 kal~~gkaklViiA~D~~~~~~~~~l~~lc~~~~IP~~-~v~sk~eLG~a~G~~~~v 106 (135)
T 2aif_A 51 KALNRGIAEIVLLAADAEPLEILLHLPLVCEDKNTPYV-FVRSKVALGRACGVSRPV 106 (135)
T ss_dssp HHHHTTCEEEEEEETTCSCHHHHHHHHHHHHHTTCCEE-EESCHHHHHHHTTCSSCC
T ss_pred HHHHcCCCeEEEEecCCChHHHHhHHHHHHHhcCCcEE-EECCHHHHHHHhCCCCcE
Confidence 445556678888887642 456778999999984 557888999999998764
No 362
>2xzm_U Ribosomal protein L7AE containing protein; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_U
Probab=31.92 E-value=1.3e+02 Score=22.49 Aligned_cols=48 Identities=13% Similarity=0.097 Sum_probs=37.7
Q ss_pred HHHHHHcCCEEEEEeCCC-H----HHHHHHHHHcCCceeEEecCChHHHHHcCC
Q 027245 123 KDVMDASGVALVLIGPGS-V----EQARTFSEQTKFKGEVYADPNHSSYEALSF 171 (226)
Q Consensus 123 ~~~l~~~Gv~lVaIs~~~-~----~~i~~f~~~~~~pfpll~Dp~~~ly~alGv 171 (226)
...++...+.+|.|..|- + ..+..+|+++++|+- +.+...++-++.|.
T Consensus 33 ~Kai~~gka~LViiA~D~~p~~~~~~i~~lc~~~~Ip~~-~v~sk~~LG~a~G~ 85 (126)
T 2xzm_U 33 LRTIEAKQALFVCVAEDCDQGNYVKLVKALCAKNEIKYV-SVPKRASLGEYLGH 85 (126)
T ss_dssp HHHHHHTCCSEEEEESSCCSTTHHHHHHHHHHHTTCCEE-EESCSHHHHHHHTC
T ss_pred HHHHHcCCceEEEEeCCCChHHHHHHHHHHHHHhCCCEE-EECCHHHHHHHHCC
Confidence 445566778888888764 3 467899999999986 56788999999997
No 363
>3hug_B Probable conserved membrane protein; ECF sigma factor, zinc binding anti-sigma factor, oxidative transcription regulation; 2.35A {Mycobacterium tuberculosis}
Probab=31.67 E-value=25 Score=26.30 Aligned_cols=23 Identities=22% Similarity=0.411 Sum_probs=19.6
Q ss_pred CCChhHHHHHHHHHHhHHHHHHc
Q 027245 107 FGCVLCRKRADYLAAKKDVMDAS 129 (226)
Q Consensus 107 ~~Cp~C~~el~~L~~~~~~l~~~ 129 (226)
..|+.|+.++.+|++....+...
T Consensus 52 a~Cp~CR~ev~eL~~~~a~L~~l 74 (108)
T 3hug_B 52 AGCPECRGAVTELCGVPALLSQL 74 (108)
T ss_dssp HTCHHHHHHHHHHTTHHHHHTTS
T ss_pred HhCHHHHHHHHHHHHHHHHHhcC
Confidence 47999999999999988877654
No 364
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=31.65 E-value=63 Score=25.25 Aligned_cols=33 Identities=15% Similarity=0.097 Sum_probs=25.9
Q ss_pred EEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEE
Q 027245 101 VAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLI 136 (226)
Q Consensus 101 VvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaI 136 (226)
|.+|.-+-||.|..-.+.|.+..+++ +++|.--
T Consensus 3 I~~~~D~~CP~cy~~~~~l~~~~~~~---~~~v~~~ 35 (203)
T 2imf_A 3 VDFYFDFLSPFSYLANQRLSKLAQDY---GLTIRYN 35 (203)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHHHHH---CCEEEEE
T ss_pred EEEEEeCCCHHHHHHHHHHHHHHHHc---CCeEEEE
Confidence 66778999999999999998887765 4665544
No 365
>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0
Probab=31.59 E-value=97 Score=23.47 Aligned_cols=56 Identities=18% Similarity=0.168 Sum_probs=38.1
Q ss_pred HHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCc--ee--EEecC------C----hHHHHHcCCccc
Q 027245 119 LAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK--GE--VYADP------N----HSSYEALSFVSG 174 (226)
Q Consensus 119 L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~p--fp--ll~Dp------~----~~ly~alGv~~~ 174 (226)
+.+..+.+++.|+.+.+++.+..+.++...+..++. |. +.+|. + ..+.+.+|+...
T Consensus 91 ~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~ 160 (226)
T 3mc1_A 91 IEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDAIVGSSLDGKLSTKEDVIRYAMESLNIKSD 160 (226)
T ss_dssp HHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTSSSCSHHHHHHHHHHHHTCCGG
T ss_pred HHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhheeeeeccCCCCCCCCCHHHHHHHHHHhCcCcc
Confidence 334456677789999999988888888888888765 44 33342 2 235667787654
No 366
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=31.38 E-value=36 Score=23.86 Aligned_cols=39 Identities=8% Similarity=-0.007 Sum_probs=28.4
Q ss_pred HHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCC
Q 027245 115 RADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKF 153 (226)
Q Consensus 115 el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~ 153 (226)
-.+...+..+++++.|+.++.++..+...++...+..++
T Consensus 19 ~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l 57 (137)
T 2pr7_A 19 DQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELET 57 (137)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHH
T ss_pred cCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCCh
Confidence 356677777888889999999998876655555555543
No 367
>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}
Probab=31.21 E-value=68 Score=24.46 Aligned_cols=83 Identities=12% Similarity=0.182 Sum_probs=50.8
Q ss_pred CcEEecCCCCeEeCCCcc-CC-CeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCc
Q 027245 77 TVKVYDVNGNAIPISDLW-KD-RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (226)
Q Consensus 77 df~L~D~~G~~v~Lsdl~-~~-~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~p 154 (226)
..-+.|.||.-+. ...+ .. +..+..|.. ...+ ..+++++.|+.++.++.++...++.++++.++.
T Consensus 13 k~vifD~DGTL~d-~~~~~~~~~~~~~~~~~-------~~~~-----~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~ 79 (176)
T 3mmz_A 13 DAVVLDFDGTQTD-DRVLIDSDGREFVSVHR-------GDGL-----GIAALRKSGLTMLILSTEQNPVVAARARKLKIP 79 (176)
T ss_dssp SEEEECCTTTTSC-SCCEECTTCCEEEEEEH-------HHHH-----HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC
T ss_pred CEEEEeCCCCcCc-CCEeecCCccHhHhccc-------ccHH-----HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe
Confidence 4678899998776 3322 11 122222211 0111 567778899999999999888899999999987
Q ss_pred eeEEec--CCh----HHHHHcCCccc
Q 027245 155 GEVYAD--PNH----SSYEALSFVSG 174 (226)
Q Consensus 155 fpll~D--p~~----~ly~alGv~~~ 174 (226)
++.. +.. .+.+.+|+...
T Consensus 80 --~~~~~~~k~~~l~~~~~~~~~~~~ 103 (176)
T 3mmz_A 80 --VLHGIDRKDLALKQWCEEQGIAPE 103 (176)
T ss_dssp --EEESCSCHHHHHHHHHHHHTCCGG
T ss_pred --eEeCCCChHHHHHHHHHHcCCCHH
Confidence 4432 222 33456666543
No 368
>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}
Probab=30.79 E-value=1.3e+02 Score=23.21 Aligned_cols=56 Identities=7% Similarity=0.021 Sum_probs=38.1
Q ss_pred hHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCc--ee--EEecC------C----hHHHHHcCCc-cccce
Q 027245 122 KKDVMDASGVALVLIGPGSVEQARTFSEQTKFK--GE--VYADP------N----HSSYEALSFV-SGVLV 177 (226)
Q Consensus 122 ~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~p--fp--ll~Dp------~----~~ly~alGv~-~~~~~ 177 (226)
..+++++.|+.+++++.+..+.++...+..++. |+ +.+|. + ..+.+.+|+. .....
T Consensus 118 ~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~i 188 (240)
T 3sd7_A 118 ILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKYIAGSNLDGTRVNKNEVIQYVLDLCNVKDKDKVI 188 (240)
T ss_dssp HHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTSCCCCHHHHHHHHHHHHTCCCGGGEE
T ss_pred HHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEEEEEeccccCCCCCCHHHHHHHHHHcCCCCCCcEE
Confidence 345667889999999988888888888888864 43 34442 2 2456778877 44333
No 369
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=30.21 E-value=1.5e+02 Score=24.83 Aligned_cols=59 Identities=15% Similarity=0.122 Sum_probs=43.6
Q ss_pred HHHHHHhHHHHHHcCCEEEEEeCCC-HHHHHHHHHHcCCceeEEecC-------ChHHHHHcCCccc
Q 027245 116 ADYLAAKKDVMDASGVALVLIGPGS-VEQARTFSEQTKFKGEVYADP-------NHSSYEALSFVSG 174 (226)
Q Consensus 116 l~~L~~~~~~l~~~Gv~lVaIs~~~-~~~i~~f~~~~~~pfpll~Dp-------~~~ly~alGv~~~ 174 (226)
+.++-+....++++|+..|.+-.-. .+.+++++++..+|..+..-| +-+-.+.+|+.+-
T Consensus 167 ~~~ai~ra~a~~eAGAd~i~~e~~~~~~~~~~i~~~~~~P~n~~~~~~~~~p~~~~~eL~~lGv~~v 233 (255)
T 2qiw_A 167 MVEAIKRIKLMEQAGARSVYPVGLSTAEQVERLVDAVSVPVNITAHPVDGHGAGDLATLAGLGVRRV 233 (255)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECCCCSHHHHHHHHTTCSSCBEEECBTTTBBTTBCHHHHHHTTCCEE
T ss_pred HHHHHHHHHHHHHcCCcEEEEcCCCCHHHHHHHHHhCCCCEEEEecCCCCCCCCCHHHHHHcCCCEE
Confidence 5566666777889999988885544 689999999998887766433 3455777888764
No 370
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=30.02 E-value=69 Score=23.77 Aligned_cols=80 Identities=9% Similarity=0.089 Sum_probs=47.7
Q ss_pred HHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCc--ee--EEec------CCh----HHHHHcCCccccceeecchhh
Q 027245 119 LAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK--GE--VYAD------PNH----SSYEALSFVSGVLVTFTPKAG 184 (226)
Q Consensus 119 L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~p--fp--ll~D------p~~----~ly~alGv~~~~~~t~~p~a~ 184 (226)
+.+..+++++.|+.+++++.++.+.++...+..++. |+ +.+| |+. .+.+.+|+...-...+. ...
T Consensus 94 ~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~iG-D~~ 172 (214)
T 3e58_A 94 VLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDIVLSGEEFKESKPNPEIYLTALKQLNVQASRALIIE-DSE 172 (214)
T ss_dssp HHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGCSSCTTSSHHHHHHHHHHTCCGGGEEEEE-CSH
T ss_pred HHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhheeeEeecccccCCCCChHHHHHHHHHcCCChHHeEEEe-ccH
Confidence 445566778899999999999988888888888864 44 3333 222 35666777654333332 223
Q ss_pred HHHHHHHHhhhcccc
Q 027245 185 LKIIQSYMEGYRQDW 199 (226)
Q Consensus 185 ~~~~~~~~~G~r~~w 199 (226)
..+.-+...|++..|
T Consensus 173 ~Di~~a~~aG~~~~~ 187 (214)
T 3e58_A 173 KGIAAGVAADVEVWA 187 (214)
T ss_dssp HHHHHHHHTTCEEEE
T ss_pred hhHHHHHHCCCEEEE
Confidence 333233335554333
No 371
>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A
Probab=29.90 E-value=1.9e+02 Score=22.20 Aligned_cols=36 Identities=8% Similarity=0.216 Sum_probs=28.6
Q ss_pred HHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCc
Q 027245 119 LAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (226)
Q Consensus 119 L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~p 154 (226)
+.+..+.+++.|+.+..++.++...++...+..++.
T Consensus 88 ~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~ 123 (222)
T 2nyv_A 88 IPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLS 123 (222)
T ss_dssp HHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG
T ss_pred HHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCH
Confidence 344456677789999999998888888888888865
No 372
>1rlg_A 50S ribosomal protein L7AE; protein-RNA, structural protein/RNA complex; HET: 5BU; 2.70A {Archaeoglobus fulgidus} SCOP: d.79.3.1
Probab=29.67 E-value=1.6e+02 Score=21.42 Aligned_cols=50 Identities=14% Similarity=0.171 Sum_probs=38.1
Q ss_pred HHHHHcCCEEEEEeCCC-----HHHHHHHHHHcCCceeEEecCChHHHHHcCCccc
Q 027245 124 DVMDASGVALVLIGPGS-----VEQARTFSEQTKFKGEVYADPNHSSYEALSFVSG 174 (226)
Q Consensus 124 ~~l~~~Gv~lVaIs~~~-----~~~i~~f~~~~~~pfpll~Dp~~~ly~alGv~~~ 174 (226)
..++...+.+|.|..|- ...+..+|++.++|+ ++.+...++-.+.|....
T Consensus 37 kal~~gka~lViiA~D~~~~~~~~~l~~lc~~~~Vp~-~~~~sk~eLG~a~G~~~~ 91 (119)
T 1rlg_A 37 KAVERGLAKLVYIAEDVDPPEIVAHLPLLCEEKNVPY-IYVKSKNDLGRAVGIEVP 91 (119)
T ss_dssp HHHTTTCCSEEEEESCCSCSTTTTHHHHHHHHHTCCE-EEESCHHHHHHHTTCSSC
T ss_pred HHHHcCCCcEEEEeCCCChHHHHHHHHHHHHHcCCCE-EEeCCHHHHHHHhCCCCC
Confidence 34455567788887763 246888999999996 777888999999999843
No 373
>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A
Probab=29.62 E-value=42 Score=25.98 Aligned_cols=35 Identities=11% Similarity=0.126 Sum_probs=28.0
Q ss_pred HHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCc
Q 027245 120 AAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (226)
Q Consensus 120 ~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~p 154 (226)
.+..+.+++.|+.+++|+.++...++...+..++.
T Consensus 92 ~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~ 126 (225)
T 1nnl_A 92 RELVSRLQERNVQVFLISGGFRSIVEHVASKLNIP 126 (225)
T ss_dssp HHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCC
Confidence 33456677889999999988888888888888876
No 374
>1vjq_A Designed protein; structural genomics, engineered protein, PSI, protein struct initiative, structural genomics of pathogenic protozoa CONS SGPP; 2.10A {} SCOP: k.43.1.1
Probab=29.45 E-value=49 Score=22.23 Aligned_cols=29 Identities=21% Similarity=0.211 Sum_probs=24.9
Q ss_pred EEEEeCCCHHHHHHHHHHcCCceeEEecC
Q 027245 133 LVLIGPGSVEQARTFSEQTKFKGEVYADP 161 (226)
Q Consensus 133 lVaIs~~~~~~i~~f~~~~~~pfpll~Dp 161 (226)
=|.|.++..+..+++.++++++|.|+.+.
T Consensus 42 di~V~p~~~~~f~~~L~~~~i~~~v~i~d 70 (79)
T 1vjq_A 42 VILIPSDMVEWFLEMLKAKGIPFTVYVEE 70 (79)
T ss_dssp EEEECGGGHHHHHHHHHHTTCCEEEEEEE
T ss_pred EEEECHHHHHHHHHHHHHCCCcEEEEehh
Confidence 36788888899999999999999987653
No 375
>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*
Probab=29.34 E-value=74 Score=24.89 Aligned_cols=40 Identities=18% Similarity=0.095 Sum_probs=31.4
Q ss_pred HHHHHhHHHHHHcCCEEEEEeCCC---------------HHHHHHHHHHcCCcee
Q 027245 117 DYLAAKKDVMDASGVALVLIGPGS---------------VEQARTFSEQTKFKGE 156 (226)
Q Consensus 117 ~~L~~~~~~l~~~Gv~lVaIs~~~---------------~~~i~~f~~~~~~pfp 156 (226)
+...+..+++++.|+.+++++..+ .+.++...++.++.|.
T Consensus 53 pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~f~ 107 (211)
T 2gmw_A 53 DGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLD 107 (211)
T ss_dssp TTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred cCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCceE
Confidence 445566777888999999999988 4677888888888764
No 376
>2ale_A SNU13, NHP2/L7AE family protein YEL026W; splicing, RNA, yeast, His-TAG, RNA binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: d.79.3.1 PDB: 1zwz_A 2ozb_A 3siu_A 3siv_A 1e7k_A
Probab=29.27 E-value=96 Score=23.56 Aligned_cols=51 Identities=4% Similarity=-0.020 Sum_probs=39.1
Q ss_pred HHHHHHcCCEEEEEeCCCH-----HHHHHHHHHcCCceeEEecCChHHHHHcCCccc
Q 027245 123 KDVMDASGVALVLIGPGSV-----EQARTFSEQTKFKGEVYADPNHSSYEALSFVSG 174 (226)
Q Consensus 123 ~~~l~~~Gv~lVaIs~~~~-----~~i~~f~~~~~~pfpll~Dp~~~ly~alGv~~~ 174 (226)
...++...+.+|.|..|-. ..+..+|++.++|+-.+ +...++-++.|..+.
T Consensus 41 ~kai~~gkakLViiA~D~~p~~~~~~l~~lc~~~~VP~~~v-~sk~eLG~a~G~~~~ 96 (134)
T 2ale_A 41 TKTLNRGISEFIIMAADCEPIEILLHLPLLCEDKNVPYVFV-PSRVALGRACGVSRP 96 (134)
T ss_dssp HHHHHHTCEEEEEEETTCSSGGGGTHHHHHHHHHTCCEEEE-SCHHHHHHHTTCSSC
T ss_pred HHHHHhCCCeEEEEeCCCCHHHHHHHHHHHHHhcCCCEEEE-CCHHHHHHHhCCCCC
Confidence 3455666788999887642 35788999999997544 777899999999875
No 377
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=28.94 E-value=1.9e+02 Score=25.07 Aligned_cols=75 Identities=13% Similarity=0.072 Sum_probs=45.5
Q ss_pred eEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEe-CCCHHHHHHHHHHcC-CceeE--Eec-----CChHHHHH
Q 027245 98 KAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIG-PGSVEQARTFSEQTK-FKGEV--YAD-----PNHSSYEA 168 (226)
Q Consensus 98 ~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs-~~~~~~i~~f~~~~~-~pfpl--l~D-----p~~~ly~a 168 (226)
+-++|.-|-.-. . ..-+.+--+....+.++|+..|.|- ..+.++++++++... +|..+ +.. .+-+-.+.
T Consensus 153 ~d~~I~ARTDa~-~-~~gldeAi~Ra~ay~eAGAD~ifi~g~~~~~ei~~~~~~~~~~Pl~~n~~~~g~~p~~~~~eL~~ 230 (302)
T 3fa4_A 153 SDIVVIARTDSL-Q-THGYEESVARLRAARDAGADVGFLEGITSREMARQVIQDLAGWPLLLNMVEHGATPSISAAEAKE 230 (302)
T ss_dssp CCCEEEEEECCH-H-HHCHHHHHHHHHHHHTTTCSEEEETTCCCHHHHHHHHHHTTTSCEEEECCTTSSSCCCCHHHHHH
T ss_pred CCEEEEEEeccc-c-cCCHHHHHHHHHHHHHcCCCEEeecCCCCHHHHHHHHHHhcCCceeEEEecCCCCCCCCHHHHHH
Confidence 345666665432 1 2223333344556778999988874 467889999999974 55433 111 13445777
Q ss_pred cCCccc
Q 027245 169 LSFVSG 174 (226)
Q Consensus 169 lGv~~~ 174 (226)
+|+.+-
T Consensus 231 lGv~~v 236 (302)
T 3fa4_A 231 MGFRII 236 (302)
T ss_dssp HTCSEE
T ss_pred cCCCEE
Confidence 898654
No 378
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=28.55 E-value=55 Score=24.96 Aligned_cols=58 Identities=12% Similarity=-0.001 Sum_probs=40.0
Q ss_pred HHHHHhHHHHHHcCCEEEEEeCCC-HHHHHHHHHHcCCc--eeE---EecCCh----HHHHHcCCccc
Q 027245 117 DYLAAKKDVMDASGVALVLIGPGS-VEQARTFSEQTKFK--GEV---YADPNH----SSYEALSFVSG 174 (226)
Q Consensus 117 ~~L~~~~~~l~~~Gv~lVaIs~~~-~~~i~~f~~~~~~p--fpl---l~Dp~~----~ly~alGv~~~ 174 (226)
+...+..+++++.|+.+++++..+ ...++.+.+..++. |.. +..++. .+.+.+|+...
T Consensus 71 ~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~ 138 (187)
T 2wm8_A 71 PEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYFVHREIYPGSKITHFERLQQKTGIPFS 138 (187)
T ss_dssp TTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTTEEEEEESSSCHHHHHHHHHHHHCCCGG
T ss_pred hhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhhcceeEEEeCchHHHHHHHHHHcCCChH
Confidence 445556667778899999999888 68888888888875 542 233442 34566777654
No 379
>2jya_A AGR_C_3324P, uncharacterized protein ATU1810; protein with unknown function ATU1810, ontario centre for ST proteomics, OCSP; NMR {Agrobacterium tumefaciens str}
Probab=28.18 E-value=44 Score=24.88 Aligned_cols=29 Identities=17% Similarity=0.188 Sum_probs=23.3
Q ss_pred EEEeCCCHHHHHHHHHHcCCceeEEecCC
Q 027245 134 VLIGPGSVEQARTFSEQTKFKGEVYADPN 162 (226)
Q Consensus 134 VaIs~~~~~~i~~f~~~~~~pfpll~Dp~ 162 (226)
|.+.-++.|.+-+||+++|++|.|.-...
T Consensus 54 v~L~F~skE~AiayAek~G~~y~V~ep~~ 82 (106)
T 2jya_A 54 VKLTFETQEQAEAYAQRKGIEYRVILPKE 82 (106)
T ss_dssp EEEEESSHHHHHHHHHHHTCEEEECCCTT
T ss_pred ceEecCCHHHHHHHHHHcCCEEEEeCCCc
Confidence 45666888999999999999998875433
No 380
>2j4d_A Cryptochrome 3, cryptochrome DASH; DNA-binding protein, flavoprotein, FAD, mitochondrion, plastid, chromophore, chloroplast; HET: FAD MHF; 1.9A {Arabidopsis thaliana} PDB: 2vtb_A* 2ijg_X* 2vtb_B*
Probab=28.13 E-value=79 Score=29.35 Aligned_cols=45 Identities=13% Similarity=0.197 Sum_probs=36.8
Q ss_pred HHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCceeEEec
Q 027245 115 RADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYAD 160 (226)
Q Consensus 115 el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~pfpll~D 160 (226)
.+..|+++.++|++.|..|+.+..+..+.+.++++++++. .|+.+
T Consensus 98 l~~sL~~L~~~L~~~G~~L~v~~g~~~~~l~~l~~~~~~~-~V~~~ 142 (525)
T 2j4d_A 98 LMECLVDLRKNLMKRGLNLLIRSGKPEEILPSLAKDFGAR-TVFAH 142 (525)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEESCHHHHHHHHHHHHTCS-EEEEE
T ss_pred HHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHcCCC-EEEEe
Confidence 4677888889999999999988766668899999999886 35655
No 381
>2e0i_A 432AA long hypothetical deoxyribodipyrimidine PHO; photolyase, FAD, DNA repair, lyase; HET: FAD; 2.80A {Sulfolobus tokodaii}
Probab=27.73 E-value=1.3e+02 Score=27.33 Aligned_cols=64 Identities=13% Similarity=0.103 Sum_probs=42.6
Q ss_pred CCeEEEEEecCCC-------ChhH--HHHHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCceeEEecCC
Q 027245 96 DRKAVVAFARHFG-------CVLC--RKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYADPN 162 (226)
Q Consensus 96 ~~~vVVvF~R~~~-------Cp~C--~~el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~pfpll~Dp~ 162 (226)
+.+++.+|+.-.. .... .--+..|+++.++|++.|..|+.+..+..+.+.++++ ++. .|+.|.+
T Consensus 26 ~~~v~~vfi~dp~~~~~~~~~~~~r~~Fl~~sL~~L~~~L~~~G~~L~v~~g~~~~~l~~l~~--~~~-~v~~~~~ 98 (440)
T 2e0i_A 26 CDRVIPVFIADPRQLINNPYKSEFAVSFMINSLLELDDELRKKGSRLNVFFGEAEKVVSRFFN--KVD-AIYVNED 98 (440)
T ss_dssp SSEEEEEEEECHHHHSSCTTCCHHHHHHHHHHHHHHHHHHHTTTCCCEEEESCHHHHHHHHCT--TCS-EEEEECC
T ss_pred CCCEEEEEEeChhhhccCCcCCHHHHHHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHHc--CCC-EEEEecc
Confidence 3477777775321 1222 2246778888899999999999887666678888888 554 3666543
No 382
>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10
Probab=27.62 E-value=1.1e+02 Score=24.21 Aligned_cols=42 Identities=19% Similarity=0.168 Sum_probs=30.8
Q ss_pred HHHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCceeEEe
Q 027245 118 YLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYA 159 (226)
Q Consensus 118 ~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~pfpll~ 159 (226)
...+...++++.|+.++.++--+...++.+.+..+++.+++.
T Consensus 24 ~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~ 65 (231)
T 1wr8_A 24 KALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVA 65 (231)
T ss_dssp HHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEE
T ss_pred HHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCCeEEE
Confidence 344455666778999988887777888888888887765443
No 383
>2jfz_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: 003 DGL; 1.86A {Helicobacter pylori} PDB: 2jfx_A* 2jfy_A* 2w4i_A*
Probab=27.49 E-value=72 Score=26.41 Aligned_cols=59 Identities=7% Similarity=0.143 Sum_probs=38.1
Q ss_pred EEEEEecCCCChhHHH---HH-HHHHHhHHHHHHcCCEEEEEeCCCHH--HHHHHHHHcCCceeEEe
Q 027245 99 AVVAFARHFGCVLCRK---RA-DYLAAKKDVMDASGVALVLIGPGSVE--QARTFSEQTKFKGEVYA 159 (226)
Q Consensus 99 vVVvF~R~~~Cp~C~~---el-~~L~~~~~~l~~~Gv~lVaIs~~~~~--~i~~f~~~~~~pfpll~ 159 (226)
.++.|.....+|+-.+ ++ ..+.+..+.+.+.|++.|+|.|.+.. .+++.++..+ .|++-
T Consensus 27 ~~iy~~D~~~~Pyg~~s~~~i~~~~~~~~~~L~~~g~d~iviaCNTa~~~~~~~lr~~~~--iPvig 91 (255)
T 2jfz_A 27 EIIYYGDSARVPYGTKDPTTIKQFGLEALDFFKPHEIELLIVACNTASALALEEMQKYSK--IPIVG 91 (255)
T ss_dssp EEEEEECTTTCCCTTSCHHHHHHHHHHHHHHHGGGCCSCEEECCHHHHHHTHHHHHHHCS--SCEEC
T ss_pred CEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEeCchhhHHHHHHHHHhCC--CCEEe
Confidence 4556666667776433 32 22333456678889999999998875 4667777754 55553
No 384
>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}
Probab=27.08 E-value=65 Score=20.54 Aligned_cols=55 Identities=13% Similarity=0.193 Sum_probs=33.7
Q ss_pred EEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEE---------EeCCCHHHHHHHHHHcCCceeEEe
Q 027245 99 AVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVL---------IGPGSVEQARTFSEQTKFKGEVYA 159 (226)
Q Consensus 99 vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVa---------Is~~~~~~i~~f~~~~~~pfpll~ 159 (226)
.+.+.+.+..|..|...+...-+. .|+.-+. |..++.+.+.+-.++.|++..++.
T Consensus 6 ~~~~~v~gm~C~~C~~~ie~~l~~------~gv~~~~v~~~~~~~~v~~~~~~~i~~~i~~~Gy~~~~~~ 69 (73)
T 3fry_A 6 KIVLELSGLSCHHCVARVKKALEE------AGAKVEKVDLNEAVVAGNKEDVDKYIKAVEAAGYQAKLRS 69 (73)
T ss_dssp EEEEEEESSBCGGGHHHHHHHHHH------TTCEEEEECSSEEEEEEEGGGHHHHHHHHHHTTCEEEECC
T ss_pred EEEEEECCCCCHHHHHHHHHHhcc------CCcEEEEEEccCCEEEEEECCHHHHHHHHHHcCCceEecC
Confidence 456778899999998765443332 3443332 333355677777777777655543
No 385
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=26.85 E-value=56 Score=27.88 Aligned_cols=44 Identities=18% Similarity=0.127 Sum_probs=31.2
Q ss_pred hHHHHHHHHHHhHHHHHH-cCCEEEEEeCCCHHHHHHHHHHcCCc
Q 027245 111 LCRKRADYLAAKKDVMDA-SGVALVLIGPGSVEQARTFSEQTKFK 154 (226)
Q Consensus 111 ~C~~el~~L~~~~~~l~~-~Gv~lVaIs~~~~~~i~~f~~~~~~p 154 (226)
..+.+++.++.....+.+ .+++|++|.--+.+.+++++++++++
T Consensus 36 ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~ 80 (393)
T 4fb5_A 36 MGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFE 80 (393)
T ss_dssp HHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCS
T ss_pred HHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCC
Confidence 356677777776665543 47889999888888888898888875
No 386
>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*
Probab=25.52 E-value=87 Score=23.65 Aligned_cols=56 Identities=14% Similarity=0.053 Sum_probs=37.9
Q ss_pred HhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCc--e--e-EEecCC----------hHHHHHcCCccccc
Q 027245 121 AKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK--G--E-VYADPN----------HSSYEALSFVSGVL 176 (226)
Q Consensus 121 ~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~p--f--p-ll~Dp~----------~~ly~alGv~~~~~ 176 (226)
+..+.+++.|+.+++++.++.+.++...+..++. | . +++... ..+.+.+|+.....
T Consensus 77 ~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~i~~~~~~~~kp~~~~~~~~~~~~g~~~~~~ 147 (205)
T 3m9l_A 77 ELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEADVLGRDEAPPKPHPGGLLKLAEAWDVSPSRM 147 (205)
T ss_dssp HHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGGEECTTTSCCTTSSHHHHHHHHHTTCCGGGE
T ss_pred HHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcceEEeCCCCCCCCCHHHHHHHHHHcCCCHHHE
Confidence 3456677889999999999888888888888863 3 2 443321 24566677765433
No 387
>3vi6_A 60S ribosomal protein L30; three-layer alpha/beta/ALPA; 1.59A {Homo sapiens} PDB: 2zkr_6 1ysh_C
Probab=25.38 E-value=1.2e+02 Score=22.72 Aligned_cols=53 Identities=13% Similarity=0.071 Sum_probs=39.0
Q ss_pred HHHHHHcCCEEEEEeCCCHH----HHHHHHHHcCCceeEEecCChHHHHHcCCcccc
Q 027245 123 KDVMDASGVALVLIGPGSVE----QARTFSEQTKFKGEVYADPNHSSYEALSFVSGV 175 (226)
Q Consensus 123 ~~~l~~~Gv~lVaIs~~~~~----~i~~f~~~~~~pfpll~Dp~~~ly~alGv~~~~ 175 (226)
.+.++...+.+|.|..|-++ .+..|+...+.+.++|.+...++-.+.|.....
T Consensus 36 ~kaIr~gkakLVIiA~Das~~~~~ki~~~~~~~~~~V~~~~~sk~eLG~A~Gk~~~v 92 (125)
T 3vi6_A 36 LKMIRQGKAKLVILANNCPALRKSEIEYYAMLAKTGVHHYSGNNIELGTACGKYYRV 92 (125)
T ss_dssp HHHHHTTCCSEEEECTTSCHHHHHHHHHHHHHTTCEEEECSSCHHHHHHHTTCSSCC
T ss_pred HHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHhCCCcEEEcCCHHHHHHHhCCcccE
Confidence 44566666889999888653 444556666778787878888999999997653
No 388
>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10
Probab=25.17 E-value=1.6e+02 Score=23.94 Aligned_cols=40 Identities=13% Similarity=0.040 Sum_probs=29.0
Q ss_pred HHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCceeEEe
Q 027245 120 AAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYA 159 (226)
Q Consensus 120 ~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~pfpll~ 159 (226)
.+...++++.|+.++.++--+...+..+.++.+++.++++
T Consensus 27 ~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~ 66 (288)
T 1nrw_A 27 ENALRQAQRDGIEVVVSTGRAHFDVMSIFEPLGIKTWVIS 66 (288)
T ss_dssp HHHHHHHHHTTCEEEEECSSCHHHHHHHHGGGTCCCEEEE
T ss_pred HHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCcEEE
Confidence 3445566778999887776677788888888888776433
No 389
>2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36
Probab=25.02 E-value=41 Score=26.43 Aligned_cols=69 Identities=6% Similarity=-0.117 Sum_probs=31.2
Q ss_pred ccccCcCC--CcEEecCCCCeEeCCCcc--CCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeC
Q 027245 69 EDTKNLLD--TVKVYDVNGNAIPISDLW--KDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGP 138 (226)
Q Consensus 69 ~~~g~~ap--df~L~D~~G~~v~Lsdl~--~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~ 138 (226)
...+.... ++.+...+| .+...-+. .+++.+|+++.+.................+.|.+.|..|+++..
T Consensus 15 ~~~~~~~e~~~~~~~~~~g-~l~~~~~~p~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~ 87 (249)
T 2i3d_A 15 ENLYFQGHMPEVIFNGPAG-RLEGRYQPSKEKSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNF 87 (249)
T ss_dssp ---------CEEEEEETTE-EEEEEEECCSSTTCCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECC
T ss_pred ccccccCceeEEEEECCCc-eEEEEEEcCCCCCCCEEEEECCCcccCCCccchHHHHHHHHHHHCCCEEEEECC
Confidence 34455555 777877777 55432111 12334566666542111111011223445566678999999864
No 390
>2gzm_A Glutamate racemase; enzyme, isomerase; HET: DGL; 1.99A {Bacillus anthracis}
Probab=24.95 E-value=1.2e+02 Score=25.19 Aligned_cols=66 Identities=8% Similarity=0.106 Sum_probs=40.0
Q ss_pred EEEEEecCCCChhH---HHHHHHH-HHhHHHHHHcCCEEEEEeCCCHH--HHHHHHHHcCCceeEEecCChH
Q 027245 99 AVVAFARHFGCVLC---RKRADYL-AAKKDVMDASGVALVLIGPGSVE--QARTFSEQTKFKGEVYADPNHS 164 (226)
Q Consensus 99 vVVvF~R~~~Cp~C---~~el~~L-~~~~~~l~~~Gv~lVaIs~~~~~--~i~~f~~~~~~pfpll~Dp~~~ 164 (226)
.++.|--...+|+- .+++.+. .+..+.+.+.|++.|+|.|.+.. .++..++..++|+-=..+|.-+
T Consensus 30 ~~iy~~D~~~~Pyg~~s~~~i~~~~~~~~~~L~~~g~d~iviaCNTas~~~l~~lr~~~~iPvigi~ep~~~ 101 (267)
T 2gzm_A 30 RIIYLGDTARCPYGPRSREEVRQFTWEMTEHLLDLNIKMLVIACNTATAVVLEEMQKQLPIPVVGVIHPGSR 101 (267)
T ss_dssp CEEEEECTTTCCCTTSCHHHHHHHHHHHHHHHHTTTCSEEEECCHHHHHHHHHHHHHHCSSCEEESHHHHHH
T ss_pred CEEEecCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEeCchhhHHHHHHHHHhCCCCEEeecHHHHH
Confidence 34555555566654 3333333 33456677899999999999875 5677777765543222344433
No 391
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=24.86 E-value=91 Score=27.27 Aligned_cols=43 Identities=9% Similarity=-0.009 Sum_probs=31.1
Q ss_pred HHHHHHHHHHhHHHHH--HcCCEEEEEeCCCHHHHHHHHHHcCCc
Q 027245 112 CRKRADYLAAKKDVMD--ASGVALVLIGPGSVEQARTFSEQTKFK 154 (226)
Q Consensus 112 C~~el~~L~~~~~~l~--~~Gv~lVaIs~~~~~~i~~f~~~~~~p 154 (226)
-+.+++.|++.-..+. ..+++|++|.--+++.+++++++++.+
T Consensus 38 g~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~~~~ 82 (412)
T 4gqa_A 38 GQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGAE 82 (412)
T ss_dssp HHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHcCCC
Confidence 4566777766544332 246889999888888999999998875
No 392
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=24.64 E-value=79 Score=24.13 Aligned_cols=38 Identities=5% Similarity=0.039 Sum_probs=30.6
Q ss_pred HHHHHhHHHHHHcCCEEEEEeCCCH---HHHHHHHHHcCCc
Q 027245 117 DYLAAKKDVMDASGVALVLIGPGSV---EQARTFSEQTKFK 154 (226)
Q Consensus 117 ~~L~~~~~~l~~~Gv~lVaIs~~~~---~~i~~f~~~~~~p 154 (226)
+.+.+..+++++.|+.+.+++..+. +.++...+..++.
T Consensus 37 ~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~ 77 (189)
T 3ib6_A 37 KNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGII 77 (189)
T ss_dssp TTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCG
T ss_pred cCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCch
Confidence 4556667778889999999997765 7888888998874
No 393
>2eq5_A 228AA long hypothetical hydantoin racemase; structural genomics, NPPSFA, national project on P structural and functional analyses; 2.20A {Pyrococcus horikoshii}
Probab=24.55 E-value=66 Score=25.76 Aligned_cols=52 Identities=10% Similarity=0.033 Sum_probs=33.6
Q ss_pred HHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCceeEEe--cCChHHHHHcC
Q 027245 117 DYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYA--DPNHSSYEALS 170 (226)
Q Consensus 117 ~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~pfpll~--Dp~~~ly~alG 170 (226)
+.+.+....+++.|++.|+|.|.+...+++..+..+ .|++. ++.-......|
T Consensus 62 ~~l~~~~~~l~~~g~d~iviaCnta~~~~~l~~~~~--iPvi~i~~~~~~~a~~~~ 115 (228)
T 2eq5_A 62 PKIIRLAKEFEREGVDAIIISCAADPAVEKVRKLLS--IPVIGAGSSVSALALAYG 115 (228)
T ss_dssp HHHHHHHHHHHHTTCSEEEECSTTCTTHHHHHHHCS--SCEEEHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhCC--CCEeCccHHHHHHHHHhC
Confidence 455565667788999999999987644555556654 55654 54444444444
No 394
>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}
Probab=24.52 E-value=73 Score=24.21 Aligned_cols=34 Identities=12% Similarity=0.225 Sum_probs=27.2
Q ss_pred HhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCc
Q 027245 121 AKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (226)
Q Consensus 121 ~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~p 154 (226)
+..+++++.|+.+++++.++.+.++...+..++.
T Consensus 98 ~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 131 (233)
T 3s6j_A 98 ELLETLDKENLKWCIATSGGIDTATINLKALKLD 131 (233)
T ss_dssp HHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCC
T ss_pred HHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchh
Confidence 3456677889999999999888888888887764
No 395
>3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii}
Probab=24.37 E-value=90 Score=23.29 Aligned_cols=58 Identities=10% Similarity=0.116 Sum_probs=30.4
Q ss_pred CCcEEecCCCCeEeCCCccC---CCeEEEEEecCC----CChhHHHHHHHHHHhHHHHHHcCCEEEEEeC
Q 027245 76 DTVKVYDVNGNAIPISDLWK---DRKAVVAFARHF----GCVLCRKRADYLAAKKDVMDASGVALVLIGP 138 (226)
Q Consensus 76 pdf~L~D~~G~~v~Lsdl~~---~~~vVVvF~R~~----~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~ 138 (226)
.++.+...+| .+...-+.. +...+|+++.+. +.... .. .....+.+.+.|..++++..
T Consensus 7 ~~~~~~~~~g-~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~-~~---~~~~~~~l~~~g~~v~~~d~ 71 (208)
T 3trd_A 7 EDFLIQGPVG-QLEVMITRPKGIEKSVTGIICHPHPLHGGTMNN-KV---VTTLAKALDELGLKTVRFNF 71 (208)
T ss_dssp SCEEEECSSS-EEEEEEECCSSCCCSEEEEEECSCGGGTCCTTC-HH---HHHHHHHHHHTTCEEEEECC
T ss_pred ceEEEECCCc-eEEEEEEcCCCCCCCCEEEEEcCCCCCCCccCC-ch---HHHHHHHHHHCCCEEEEEec
Confidence 3566666666 554322111 134566666662 22222 12 23344566678999998864
No 396
>3ga8_A HTH-type transcriptional regulator MQSA (YGIT/B30; helix-turn-helix, Zn-binding protein, DNA-binding, transcrip transcription regulation; HET: PE4; 1.70A {Escherichia coli k-12} PDB: 3hi2_A
Probab=24.23 E-value=43 Score=22.84 Aligned_cols=33 Identities=24% Similarity=0.456 Sum_probs=23.4
Q ss_pred CCCeEEEEEecCCCChhH------HHHHHHHHHhHHHHH
Q 027245 95 KDRKAVVAFARHFGCVLC------RKRADYLAAKKDVMD 127 (226)
Q Consensus 95 ~~~~vVVvF~R~~~Cp~C------~~el~~L~~~~~~l~ 127 (226)
+++..+|-.+++.+|+.| .+++..+.+...+|+
T Consensus 25 ~G~~~~I~~Vp~~~C~~CGE~~~~~e~~~~~~~~~~~f~ 63 (78)
T 3ga8_A 25 RGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFR 63 (78)
T ss_dssp TTEEEEEEEEEEEEETTTCCEECCHHHHHHHHHHHHHHH
T ss_pred CCEEEEEcCceeEECCCCCCEEECHHHHHHHHHHHHHHH
Confidence 455566668899999999 456666666666664
No 397
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=24.16 E-value=1.5e+02 Score=21.87 Aligned_cols=43 Identities=19% Similarity=0.091 Sum_probs=32.0
Q ss_pred HHHHHHHHHhHHHHHHcCCEEEEEeC---CC---------HHHHHHHHHHcCCce
Q 027245 113 RKRADYLAAKKDVMDASGVALVLIGP---GS---------VEQARTFSEQTKFKG 155 (226)
Q Consensus 113 ~~el~~L~~~~~~l~~~Gv~lVaIs~---~~---------~~~i~~f~~~~~~pf 155 (226)
.++...+.+..+.+++.++++|.++. .. .+.+++++++++++|
T Consensus 86 ~~~~~~~~~~i~~~~~~~~~vvl~~~~~p~~~~~~~~~~~~~~~~~~a~~~~~~~ 140 (185)
T 3hp4_A 86 KKMQTNLTALVKKSQAANAMTALMEIYIPPNYGPRYSKMFTSSFTQISEDTNAHL 140 (185)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEECCCCCSTTCHHHHHHHHHHHHHHHHHHCCEE
T ss_pred HHHHHHHHHHHHHHHHcCCeEEEEeCCCCCcccHHHHHHHHHHHHHHHHHcCCEE
Confidence 55677788888889899999999973 11 145677888888764
No 398
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=24.00 E-value=46 Score=26.71 Aligned_cols=21 Identities=33% Similarity=0.344 Sum_probs=17.9
Q ss_pred CCChhHHHHHHHHHHhHHHHH
Q 027245 107 FGCVLCRKRADYLAAKKDVMD 127 (226)
Q Consensus 107 ~~Cp~C~~el~~L~~~~~~l~ 127 (226)
..||.|+.++.+|++....+-
T Consensus 33 ~~C~~Cr~~v~~l~~~~~~l~ 53 (195)
T 2q1z_B 33 SLCDECRARAGALDAVGGSLM 53 (195)
T ss_dssp HHCHHHHHHHHHHHHHHHHHH
T ss_pred hHCHHHHHHHHHHHHHHHHHh
Confidence 469999999999999876654
No 399
>1u3d_A Cryptochrome 1 apoprotein; photolyase, AMPPNP, signaling protein; HET: FAD ANP NDS; 2.45A {Arabidopsis thaliana} SCOP: a.99.1.1 c.28.1.1 PDB: 1u3c_A*
Probab=24.00 E-value=1.2e+02 Score=27.85 Aligned_cols=45 Identities=13% Similarity=0.149 Sum_probs=36.0
Q ss_pred HHHHHHHhHHHHHHcCCEEEEEeCCC-HHHHHHHHHHcCCceeEEec
Q 027245 115 RADYLAAKKDVMDASGVALVLIGPGS-VEQARTFSEQTKFKGEVYAD 160 (226)
Q Consensus 115 el~~L~~~~~~l~~~Gv~lVaIs~~~-~~~i~~f~~~~~~pfpll~D 160 (226)
-+..|+++.++|++.|..|+.+..++ .+.+.++++++++.- |+.|
T Consensus 63 l~~sL~~L~~~L~~~G~~L~v~~~g~~~~~l~~l~~~~~~~~-V~~~ 108 (509)
T 1u3d_A 63 LKNSLAQLDSSLRSLGTCLITKRSTDSVASLLDVVKSTGASQ-IFFN 108 (509)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEECSCHHHHHHHHHHHHTCCE-EEEE
T ss_pred HHHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHcCCCE-EEEe
Confidence 36778888999999999999886545 478999999999864 5554
No 400
>2lju_A Putative oxidoreductase; structural genomics, seattle structural GENO center for infectious disease, ssgcid; NMR {Ehrlichia chaffeensis}
Probab=23.92 E-value=52 Score=24.52 Aligned_cols=27 Identities=19% Similarity=0.137 Sum_probs=22.1
Q ss_pred EeCCCHHHHHHHHHHcCCceeEEecCC
Q 027245 136 IGPGSVEQARTFSEQTKFKGEVYADPN 162 (226)
Q Consensus 136 Is~~~~~~i~~f~~~~~~pfpll~Dp~ 162 (226)
+.-++.|.+-+||+++|++|.|.-...
T Consensus 64 L~F~skE~AiayAek~G~~y~V~ep~~ 90 (108)
T 2lju_A 64 LSFTTRELAIAYAVAHKIDYTVLQDNP 90 (108)
T ss_dssp EEESSHHHHHHHHHHTTCEEEEECSSC
T ss_pred EecCCHHHHHHHHHHcCCEEEEecCCc
Confidence 555778999999999999999885443
No 401
>3out_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, MURI, cell envelope; HET: MSE DGL; 1.65A {Francisella tularensis subsp}
Probab=23.84 E-value=61 Score=27.43 Aligned_cols=65 Identities=8% Similarity=0.025 Sum_probs=41.5
Q ss_pred EEEEEecCCCChhHHHHHHHHHH----hHHHHHHcCCEEEEEeCCCHH--HHHHHHHHc-CCceeEEecCCh
Q 027245 99 AVVAFARHFGCVLCRKRADYLAA----KKDVMDASGVALVLIGPGSVE--QARTFSEQT-KFKGEVYADPNH 163 (226)
Q Consensus 99 vVVvF~R~~~Cp~C~~el~~L~~----~~~~l~~~Gv~lVaIs~~~~~--~i~~f~~~~-~~pfpll~Dp~~ 163 (226)
-++.|--...+|+-.+.-.++.+ ..+.+.+.|++.|+|.|.+.. .++..++.+ .+|+-=+.||.-
T Consensus 34 ~~iy~~D~a~~PYG~~~~~~i~~~~~~~~~~L~~~g~~~iVIACNTa~~~al~~lr~~~~~iPvigiiep~~ 105 (268)
T 3out_A 34 DIIYFGDIARIPYGTKSRATIQKFAAQTAKFLIDQEVKAIIIACNTISAIAKDIVQEIAKAIPVIDVITAGV 105 (268)
T ss_dssp CEEEEECTTTCCCTTSCHHHHHHHHHHHHHHHHHTTCSEEEECCHHHHHHHHHHHHHHHTTSCEEEHHHHHH
T ss_pred cEEEecCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHHHhcCCCCEEeccHHHH
Confidence 35666666677765443333333 456778899999999999875 447777776 555432234433
No 402
>2lbw_A H/ACA ribonucleoprotein complex subunit 2; L7AE, snoRNP, scaRNP, RNA binding protein; NMR {Saccharomyces cerevisiae} PDB: 2lbx_A
Probab=23.41 E-value=1.8e+02 Score=21.32 Aligned_cols=51 Identities=10% Similarity=-0.031 Sum_probs=37.4
Q ss_pred HHHHHHcCCEEEEEeCCCH-----HHHHHHHHHcCCceeEEecCChHHHHHcCCccc
Q 027245 123 KDVMDASGVALVLIGPGSV-----EQARTFSEQTKFKGEVYADPNHSSYEALSFVSG 174 (226)
Q Consensus 123 ~~~l~~~Gv~lVaIs~~~~-----~~i~~f~~~~~~pfpll~Dp~~~ly~alGv~~~ 174 (226)
...++...+.+|.|..|-. ..+..+|+++++|+-. .+...++-++.|.++.
T Consensus 29 ~kai~~gkakLViiA~D~~~~~~~~~l~~lc~~~~VP~~~-v~sk~eLG~a~g~k~~ 84 (121)
T 2lbw_A 29 VKALRKGEKGLVVIAGDIWPADVISHIPVLCEDHSVPYIF-IPSKQDLGAAGATKRP 84 (121)
T ss_dssp HHHHHHSCCCEEEECTTCSCTTHHHHHHHHHHHTCCCEEE-CCCHHHHHHHHTCSSC
T ss_pred HHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHhcCCcEEE-ECCHHHHHHHhCCCCC
Confidence 3455667788999887732 3577899999998744 4566888889997653
No 403
>2jfq_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: DGL; 2.15A {Staphylococcus aureus}
Probab=23.33 E-value=1.2e+02 Score=25.68 Aligned_cols=58 Identities=5% Similarity=0.035 Sum_probs=36.3
Q ss_pred EEEEecCCCChhH---HHHHHHHH-HhHHHHHHcCCEEEEEeCCCHH--HHHHHHHHcCCceeEEe
Q 027245 100 VVAFARHFGCVLC---RKRADYLA-AKKDVMDASGVALVLIGPGSVE--QARTFSEQTKFKGEVYA 159 (226)
Q Consensus 100 VVvF~R~~~Cp~C---~~el~~L~-~~~~~l~~~Gv~lVaIs~~~~~--~i~~f~~~~~~pfpll~ 159 (226)
++.|.-...+|+- .+++.+.. +..+.+.+.|++.|+|.|.+.. .++..++..+ .|++-
T Consensus 50 ~iy~~D~~~~Pyg~~s~~~i~~~~~~~~~~L~~~g~d~IVIaCNTas~~~l~~lr~~~~--iPVig 113 (286)
T 2jfq_A 50 IYYLGDIGRCPYGPRPGEQVKQYTVEIARKLMEFDIKMLVIACNTATAVALEYLQKTLS--ISVIG 113 (286)
T ss_dssp EEEEECTTTCCCTTSCHHHHHHHHHHHHHHHTTSCCSEEEECCHHHHHHHHHHHHHHCS--SEEEE
T ss_pred EEEeccCCCCCcCCCCHHHHHHHHHHHHHHHHHCCCCEEEEeCCchhHHHHHHHHHhCC--CCEEe
Confidence 4444445556653 33333333 3456677889999999999875 4667777754 56553
No 404
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=23.31 E-value=26 Score=32.74 Aligned_cols=37 Identities=8% Similarity=0.209 Sum_probs=29.1
Q ss_pred CccccCcCCCcEEecCCCCeEeCCCccCCCeEEEEEe
Q 027245 68 SEDTKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFA 104 (226)
Q Consensus 68 ~~~~g~~apdf~L~D~~G~~v~Lsdl~~~~~vVVvF~ 104 (226)
.+.+|..+||+.|.+.+|.+..|.+++.++..+|+.|
T Consensus 444 ~~~~G~r~pd~~l~~~~g~~~~l~~~l~~~~~~ll~~ 480 (570)
T 3fmw_A 444 HPWPGRFAGGLVLSRPSGEPVPVAELLRSARPLLLDL 480 (570)
T ss_dssp CSSTTCBCTTCEECCSTTCCEEHHHHSTTCCCEEECS
T ss_pred CccccCcCCCceeecCCCcceeHHHHhcCCeEEEEEe
Confidence 3568999999999988888789999987755555544
No 405
>3bzc_A TEX; helix-turn-helix, helix-hairpin-helix, S1 domain, YQGF domain, transcription, RNA binding protein; 2.27A {Pseudomonas aeruginosa} SCOP: a.60.2.6 a.60.2.6 a.294.1.1 b.40.4.5 c.55.3.13 PDB: 3bzk_A 2oce_A
Probab=22.97 E-value=2.1e+02 Score=28.31 Aligned_cols=81 Identities=20% Similarity=0.272 Sum_probs=44.3
Q ss_pred cEEecCCCCeEeCCCccCCCeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEEeCCCH-HHHHHHHHH----cC
Q 027245 78 VKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSV-EQARTFSEQ----TK 152 (226)
Q Consensus 78 f~L~D~~G~~v~Lsdl~~~~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaIs~~~~-~~i~~f~~~----~~ 152 (226)
+.+.|.+|+.+...-+ |.+ ++=++.-.+...+.+-+++.++.+|+||.++. .+.++|..+ .+
T Consensus 344 ~a~vd~~G~~l~~~~i----------y~~---~~~~~~~~~~~~l~~li~~~~~~~IaIGngtasret~~~v~~l~~~~~ 410 (785)
T 3bzc_A 344 VAVVDATGKLLDTATV----------YPH---APKNQWDQTLAVLAALCAKHQVELIAIGNGTASRETDKLAGELIKKYP 410 (785)
T ss_dssp EEEECTTSCEEEEEEE----------CCS---GGGCCHHHHHHHHHHHHHHHTCCEEEEESSTTHHHHHHHHHHHHHHCG
T ss_pred EEEECCCCCEEEEEEE----------ecC---CchhHHHHHHHHHHHHHHHcCCCEEEECCCccCHHHHHHHHHHHHhcc
Confidence 5667777776654322 222 11111223444555666778999999999864 244444433 23
Q ss_pred -Ccee-EEecCC-hHHHHHcCC
Q 027245 153 -FKGE-VYADPN-HSSYEALSF 171 (226)
Q Consensus 153 -~pfp-ll~Dp~-~~ly~alGv 171 (226)
.+.+ ++.+++ ..+|.+-..
T Consensus 411 ~~~i~~v~v~e~gArvy~as~~ 432 (785)
T 3bzc_A 411 GMKLTKIMVSEAGASVYSASEL 432 (785)
T ss_dssp GGCCEEEEECCHHHHHHHHSHH
T ss_pred cCCCCEEEEcCCcCCHHHHHHH
Confidence 2333 445544 477877543
No 406
>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6
Probab=22.91 E-value=99 Score=24.35 Aligned_cols=32 Identities=9% Similarity=0.195 Sum_probs=25.9
Q ss_pred HHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCc
Q 027245 123 KDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (226)
Q Consensus 123 ~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~p 154 (226)
.+++++.|+.+++++.++.+.++...+..++.
T Consensus 123 l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~ 154 (243)
T 2hsz_A 123 LEALKAQGYILAVVTNKPTKHVQPILTAFGID 154 (243)
T ss_dssp HHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG
T ss_pred HHHHHHCCCEEEEEECCcHHHHHHHHHHcCch
Confidence 45566789999999998888888888888864
No 407
>1k7c_A Rhamnogalacturonan acetylesterase; N-linked glycosylation, SGNH-hydrolase, hydrolase; HET: NAG MAN; 1.12A {Aspergillus aculeatus} SCOP: c.23.10.4 PDB: 1dex_A* 1deo_A* 1pp4_A* 3c1u_A*
Probab=22.79 E-value=1.3e+02 Score=23.99 Aligned_cols=42 Identities=21% Similarity=0.251 Sum_probs=31.7
Q ss_pred HHHHHHHHhHHHHHHcCCEEEEEeCCC----------------HHHHHHHHHHcCCce
Q 027245 114 KRADYLAAKKDVMDASGVALVLIGPGS----------------VEQARTFSEQTKFKG 155 (226)
Q Consensus 114 ~el~~L~~~~~~l~~~Gv~lVaIs~~~----------------~~~i~~f~~~~~~pf 155 (226)
++...|.+..+++++.|+++|.|++-. .+.+++.+++++++|
T Consensus 109 ~~~~~l~~~i~~~~~~g~~vil~tp~p~~~~~~~~~~~~~~~y~~~~~~vA~~~~v~~ 166 (233)
T 1k7c_A 109 TFPAYLENAAKLFTAKGAKVILSSQTPNNPWETGTFVNSPTRFVEYAELAAEVAGVEY 166 (233)
T ss_dssp BHHHHHHHHHHHHHHTTCEEEEECCCCCCTTTTSSCCCCCCHHHHHHHHHHHHHTCEE
T ss_pred HHHHHHHHHHHHHHHCCCEEEEECCCCccccCCCccccchHHHHHHHHHHHHHhCCeE
Confidence 466778888888888999999998642 145678888888765
No 408
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=22.65 E-value=3.2e+02 Score=22.40 Aligned_cols=71 Identities=11% Similarity=0.033 Sum_probs=38.8
Q ss_pred CeEEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCE-EEEEeCCCHHHHHHHHHHcCCceeEEe---cCChHHHHHcCC
Q 027245 97 RKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVA-LVLIGPGSVEQARTFSEQTKFKGEVYA---DPNHSSYEALSF 171 (226)
Q Consensus 97 ~~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~-lVaIs~~~~~~i~~f~~~~~~pfpll~---Dp~~~ly~alGv 171 (226)
++.++ ++-+...+ ++-...|.+....+.+ ++. ++.++.++.+.+++.+++.+++--.+. +.-..+|....+
T Consensus 183 ~~~il-~~~g~~~~--~k~~~~li~a~~~l~~-~~~~l~i~G~~~~~~l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~ 257 (364)
T 1f0k_A 183 PVRVL-VVGGSQGA--RILNQTMPQVAAKLGD-SVTIWHQSGKGSQQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADV 257 (364)
T ss_dssp SEEEE-EECTTTCC--HHHHHHHHHHHHHHGG-GEEEEEECCTTCHHHHHHHHHHTTCTTSEEESCCSCHHHHHHHCSE
T ss_pred CcEEE-EEcCchHh--HHHHHHHHHHHHHhcC-CcEEEEEcCCchHHHHHHHHhhcCCCceEEecchhhHHHHHHhCCE
Confidence 34444 44444433 4445555555566655 777 566777777778888877664321222 222455655444
No 409
>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}
Probab=22.63 E-value=1e+02 Score=23.31 Aligned_cols=79 Identities=14% Similarity=0.259 Sum_probs=46.6
Q ss_pred HHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCc--ee--EEec------CCh----HHHHHcCCccccceeecchhhH
Q 027245 120 AAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK--GE--VYAD------PNH----SSYEALSFVSGVLVTFTPKAGL 185 (226)
Q Consensus 120 ~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~p--fp--ll~D------p~~----~ly~alGv~~~~~~t~~p~a~~ 185 (226)
.+..+.+++.|+.+++++.++.+.++...+..++. |. +.+| |+. .+.+.+|+.......+. ....
T Consensus 102 ~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~iG-D~~~ 180 (230)
T 3um9_A 102 PQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDHLISVDEVRLFKPHQKVYELAMDTLHLGESEILFVS-CNSW 180 (230)
T ss_dssp HHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEGGGTTCCTTCHHHHHHHHHHHTCCGGGEEEEE-SCHH
T ss_pred HHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcceeEehhhcccCCCChHHHHHHHHHhCCCcccEEEEe-CCHH
Confidence 34456677889999999999988888888887764 44 3333 233 34566787654433332 2233
Q ss_pred HHHHHHHhhhcccc
Q 027245 186 KIIQSYMEGYRQDW 199 (226)
Q Consensus 186 ~~~~~~~~G~r~~w 199 (226)
.+.-+...|+.-.|
T Consensus 181 Di~~a~~aG~~~~~ 194 (230)
T 3um9_A 181 DATGAKYFGYPVCW 194 (230)
T ss_dssp HHHHHHHHTCCEEE
T ss_pred HHHHHHHCCCEEEE
Confidence 33223334554333
No 410
>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A
Probab=22.41 E-value=60 Score=26.98 Aligned_cols=37 Identities=8% Similarity=0.099 Sum_probs=29.5
Q ss_pred HHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCcee
Q 027245 120 AAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGE 156 (226)
Q Consensus 120 ~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~pfp 156 (226)
.+..+.+++.|+.++.|+-|-...++..+++.++.++
T Consensus 147 ~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~ 183 (297)
T 4fe3_A 147 ENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHS 183 (297)
T ss_dssp HHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCT
T ss_pred HHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcc
Confidence 3455667788999999999888888889999887653
No 411
>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13
Probab=22.41 E-value=66 Score=25.72 Aligned_cols=35 Identities=11% Similarity=0.010 Sum_probs=25.6
Q ss_pred EEEEEecCCCChhHHHHHHHHHHhHHHHHHcCCEEEEE
Q 027245 99 AVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLI 136 (226)
Q Consensus 99 vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~Gv~lVaI 136 (226)
+-|.+|.-+-||.|..-.+.|.++.++ .+++|.-.
T Consensus 6 ~~I~~~~D~~CP~Cy~~~~~l~~l~~~---~~~~v~~~ 40 (226)
T 1r4w_A 6 RVLELFYDVLSPYSWLGFEVLCRYQHL---WNIKLKLR 40 (226)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHTTT---SSEEEEEE
T ss_pred ceEEEEEeCCChHHHHHHHHHHHHHHH---cCCeEEEE
Confidence 457788899999999888888776543 36665544
No 412
>3uhf_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich fold, isomerase; HET: DGL; 1.83A {Campylobacter jejuni} PDB: 3uho_A* 3uhp_A
Probab=22.20 E-value=48 Score=28.32 Aligned_cols=90 Identities=11% Similarity=0.168 Sum_probs=52.6
Q ss_pred cEEecCC-CCeEeCCCccC--CCeEEEEEecCCCChhHHHHHHHHHH----hHHHHHHcCCEEEEEeCCCHHH--HHHHH
Q 027245 78 VKVYDVN-GNAIPISDLWK--DRKAVVAFARHFGCVLCRKRADYLAA----KKDVMDASGVALVLIGPGSVEQ--ARTFS 148 (226)
Q Consensus 78 f~L~D~~-G~~v~Lsdl~~--~~~vVVvF~R~~~Cp~C~~el~~L~~----~~~~l~~~Gv~lVaIs~~~~~~--i~~f~ 148 (226)
+-++|.. |..-.+..+.+ ..--++.|--...+|+-.+.-.++.+ ..+.+++.|++.|+|.|.+... +++.+
T Consensus 27 IgvfDSGvGGLtv~~~i~~~lP~e~~iy~~D~a~~PYG~ks~e~i~~~~~~~~~~L~~~g~d~IVIACNTa~~~al~~lr 106 (274)
T 3uhf_A 27 IGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIIKFCLEALDFFEQFQIDMLIIACNTASAYALDALR 106 (274)
T ss_dssp EEEEESSSTTHHHHHHHHHTTCCSEEEEEECTTTCCCTTSCHHHHHHHHHHHHHHHTTSCCSEEEECCHHHHHHSHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHCCCCCEEEEecCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEeCCChhHHHHHHHH
Confidence 5666643 33222332221 12346677677777766544444433 3566788999999999998763 57777
Q ss_pred HHcCCceeEEecCChHHHH
Q 027245 149 EQTKFKGEVYADPNHSSYE 167 (226)
Q Consensus 149 ~~~~~pfpll~Dp~~~ly~ 167 (226)
+.+.+|+-=+.||.-+...
T Consensus 107 ~~~~iPvigiiepa~~~a~ 125 (274)
T 3uhf_A 107 AKAHFPVYGVIDAGVEATI 125 (274)
T ss_dssp HHCSSCEECSHHHHHHHHH
T ss_pred HhcCCCEEcCCHHHHHHHH
Confidence 7766554323455544333
No 413
>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*
Probab=22.09 E-value=1.1e+02 Score=23.63 Aligned_cols=79 Identities=13% Similarity=0.185 Sum_probs=46.1
Q ss_pred HHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCc--ee-EE-ec------CChHH----HHHcCCccccceeecchhhH
Q 027245 120 AAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK--GE-VY-AD------PNHSS----YEALSFVSGVLVTFTPKAGL 185 (226)
Q Consensus 120 ~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~p--fp-ll-~D------p~~~l----y~alGv~~~~~~t~~p~a~~ 185 (226)
.+..+++++.|+.++.++..+...++...+..++. |. ++ +| |+... .+.+|+...-...+. ....
T Consensus 111 ~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~iG-D~~~ 189 (240)
T 2no4_A 111 AETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLDSCLSADDLKIYKPDPRIYQFACDRLGVNPNEVCFVS-SNAW 189 (240)
T ss_dssp HHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGTTCCTTSHHHHHHHHHHHTCCGGGEEEEE-SCHH
T ss_pred HHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHcCEEEEccccCCCCCCHHHHHHHHHHcCCCcccEEEEe-CCHH
Confidence 33456677889999999998888888888888864 43 33 22 34333 456787654333332 2333
Q ss_pred HHHHHHHhhhcccc
Q 027245 186 KIIQSYMEGYRQDW 199 (226)
Q Consensus 186 ~~~~~~~~G~r~~w 199 (226)
.+--+...|+...|
T Consensus 190 Di~~a~~aG~~~~~ 203 (240)
T 2no4_A 190 DLGGAGKFGFNTVR 203 (240)
T ss_dssp HHHHHHHHTCEEEE
T ss_pred HHHHHHHCCCEEEE
Confidence 33233334544333
No 414
>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}
Probab=21.99 E-value=68 Score=23.96 Aligned_cols=34 Identities=12% Similarity=0.236 Sum_probs=28.3
Q ss_pred HhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCc
Q 027245 121 AKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (226)
Q Consensus 121 ~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~p 154 (226)
+..+.+++.|+.+++++.+....++...+..+++
T Consensus 89 ~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~ 122 (219)
T 3kd3_A 89 ELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIP 122 (219)
T ss_dssp HHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCC
T ss_pred HHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCC
Confidence 3456677889999999998888888888888885
No 415
>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A
Probab=21.86 E-value=87 Score=24.02 Aligned_cols=58 Identities=21% Similarity=0.203 Sum_probs=38.1
Q ss_pred hHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCc--ee--EEec------CC----hHHHHHcCCccccceee
Q 027245 122 KKDVMDASGVALVLIGPGSVEQARTFSEQTKFK--GE--VYAD------PN----HSSYEALSFVSGVLVTF 179 (226)
Q Consensus 122 ~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~p--fp--ll~D------p~----~~ly~alGv~~~~~~t~ 179 (226)
..+.+++.|+.+++++.++.+.++...+..++. |. +.+| |+ ..+.+.+|+.......+
T Consensus 112 ~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~v 183 (237)
T 4ex6_A 112 GLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTVIAGDDSVERGKPHPDMALHVARGLGIPPERCVVI 183 (237)
T ss_dssp HHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEEEE
T ss_pred HHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhheeeEEeCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEE
Confidence 345667789999999999988888888887763 34 3333 12 23566678765433333
No 416
>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}
Probab=21.64 E-value=91 Score=24.53 Aligned_cols=33 Identities=6% Similarity=0.058 Sum_probs=28.1
Q ss_pred HHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCce
Q 027245 123 KDVMDASGVALVLIGPGSVEQARTFSEQTKFKG 155 (226)
Q Consensus 123 ~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~pf 155 (226)
.+.+++.|+.+.+|+.++.+.++..+++.++..
T Consensus 61 l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~ 93 (195)
T 3n07_A 61 VKALMNAGIEIAIITGRRSQIVENRMKALGISL 93 (195)
T ss_dssp HHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE
T ss_pred HHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE
Confidence 566778999999999998888999999988763
No 417
>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19
Probab=21.54 E-value=68 Score=25.10 Aligned_cols=40 Identities=8% Similarity=0.087 Sum_probs=30.6
Q ss_pred HHHHHhHHHHHHcCCEEEEEeCCCH---------------HHHHHHHHHcCCcee
Q 027245 117 DYLAAKKDVMDASGVALVLIGPGSV---------------EQARTFSEQTKFKGE 156 (226)
Q Consensus 117 ~~L~~~~~~l~~~Gv~lVaIs~~~~---------------~~i~~f~~~~~~pfp 156 (226)
+...+..+++++.|+.++.++..+. +.++...++.++.|.
T Consensus 59 ~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~ 113 (218)
T 2o2x_A 59 PQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVD 113 (218)
T ss_dssp GGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred cCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCcee
Confidence 3444556677788999999998887 678888888887654
No 418
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=21.40 E-value=1.2e+02 Score=26.13 Aligned_cols=100 Identities=9% Similarity=0.007 Sum_probs=55.4
Q ss_pred eEEEEEecCCCChhHHHHHHHHHHhHHHHHHc-CCEEEEEeCCCHHHH-HHHHHHcCCc--ee--EEecCChHHHHHcCC
Q 027245 98 KAVVAFARHFGCVLCRKRADYLAAKKDVMDAS-GVALVLIGPGSVEQA-RTFSEQTKFK--GE--VYADPNHSSYEALSF 171 (226)
Q Consensus 98 ~vVVvF~R~~~Cp~C~~el~~L~~~~~~l~~~-Gv~lVaIs~~~~~~i-~~f~~~~~~p--fp--ll~Dp~~~ly~alGv 171 (226)
+.+|+|+ ..+|+.|.+++..|.+..++++.. .+..+.|..+..... ..+.+.+++. +| ++.+....-.+.|.+
T Consensus 249 ~~~~~f~-~~~~~~~~~~~~~l~~vA~~~~~~~ki~F~~id~~~~~~~l~~~~~~fgl~~~~P~~~i~~~~~~~~~~y~~ 327 (367)
T 3us3_A 249 IHIVAFA-EEADPDGYEFLEILKSVAQDNTDNPDLSIIWIDPDDFPLLVPYWEKTFDIDLSAPQIGVVNVTDADSVWMEM 327 (367)
T ss_dssp EEEEEEC-CTTSHHHHHHHHHHHHHHHHTTTCTTCCEEEECGGGCTTTHHHHHHHHTCCTTSCEEEEEETTTCCEEECCC
T ss_pred cEEEEEE-cCCChhHHHHHHHHHHHHHHcCCCCceEEEEECCccchhHHHHHHHhcCCCCCCCeEEEEecccccceeecC
Confidence 4555554 578999999999999999999876 488888887764322 2223344432 44 555654321111222
Q ss_pred ccccceeecchhhHHHHHHHHhhhcccc
Q 027245 172 VSGVLVTFTPKAGLKIIQSYMEGYRQDW 199 (226)
Q Consensus 172 ~~~~~~t~~p~a~~~~~~~~~~G~r~~w 199 (226)
... ...++.....+-+..++.|--.-|
T Consensus 328 ~~~-~~~~t~~~i~~F~~~~~~Gkl~p~ 354 (367)
T 3us3_A 328 DDE-EDLPSAEELEDWLEDVLEGEINTE 354 (367)
T ss_dssp CTT-SCCCCHHHHHHHHHHHHHTSSCC-
T ss_pred Ccc-cccCCHHHHHHHHHHHHcCCcCcc
Confidence 210 012344455555566666643333
No 419
>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*
Probab=21.40 E-value=1.1e+02 Score=22.54 Aligned_cols=53 Identities=13% Similarity=-0.001 Sum_probs=36.2
Q ss_pred hHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCceeEE-ecCChH----HHHHcCCccc
Q 027245 122 KKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVY-ADPNHS----SYEALSFVSG 174 (226)
Q Consensus 122 ~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~pfpll-~Dp~~~----ly~alGv~~~ 174 (226)
..+++++.|+.++.++..+.+.++...++.++....- .-|+.. +.+.+|+...
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~~~~~kpk~~~~~~~~~~~~~~~~ 96 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDYLFQGVVDKLSAAEELCNELGINLE 96 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSEEECSCSCHHHHHHHHHHHHTCCGG
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCEeecccCChHHHHHHHHHHcCCCHH
Confidence 4567778999999999998888999999988763221 123333 3455666543
No 420
>3s81_A Putative aspartate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta fold, cytosol; 1.80A {Salmonella enterica subsp} PDB: 3s7z_A
Probab=21.39 E-value=64 Score=27.28 Aligned_cols=41 Identities=12% Similarity=0.217 Sum_probs=29.9
Q ss_pred HHHHHHhHHHHHHcCCEEEEEeCCCHH-HHHHHHHHcCCceeEE
Q 027245 116 ADYLAAKKDVMDASGVALVLIGPGSVE-QARTFSEQTKFKGEVY 158 (226)
Q Consensus 116 l~~L~~~~~~l~~~Gv~lVaIs~~~~~-~i~~f~~~~~~pfpll 158 (226)
.+.|.+..+.+++.|++.|+|.|.+.. .+++.++..+ .||+
T Consensus 85 ~~~l~~~~~~L~~~Gad~IVIaCNTah~~l~~lr~~~~--iPvi 126 (268)
T 3s81_A 85 YRYLERYLHMLEDAGAECIVIPCNTAHYWFDDLQNVAK--ARMI 126 (268)
T ss_dssp HHHHHHHHHHHHHTTCSEEECSCSGGGGGHHHHHHHCS--SEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCHHHHHHHHHHHCC--CCEE
Confidence 455666677788999999999999853 5566666655 4554
No 421
>2kg4_A Growth arrest and DNA-damage-inducible protein GA alpha; GADD45, flexible regions, monomer cycle; NMR {Homo sapiens}
Probab=21.38 E-value=82 Score=25.16 Aligned_cols=44 Identities=16% Similarity=0.163 Sum_probs=32.5
Q ss_pred HHcCCEEEEEeCCC--H---------HHHHHHHHHcCCceeEEecCChHHHHHcCC
Q 027245 127 DASGVALVLIGPGS--V---------EQARTFSEQTKFKGEVYADPNHSSYEALSF 171 (226)
Q Consensus 127 ~~~Gv~lVaIs~~~--~---------~~i~~f~~~~~~pfpll~Dp~~~ly~alGv 171 (226)
+...+.++.+..|- + ..+..||+++++|+ +++|...++-++.|+
T Consensus 50 ~k~~a~lcvLA~D~d~~~~i~~hi~~~li~alC~E~~Ip~-i~V~s~k~LG~a~Gi 104 (165)
T 2kg4_A 50 DPDNVVLCLLAADEDDDRDVALQIHFTLIQAFCCENDINI-LRVSNPGRLAELLLL 104 (165)
T ss_dssp CTTTEEEEEEECCTGGGGCHHHHHHHHHHHHHHHHTTCCE-EEESCHHHHHHHHHH
T ss_pred CCCcEEEEEEeCCCCccchhhhhccHHHHHHHHHHcCCCE-EEECCHHHHHHHHCC
Confidence 33456666666653 1 13669999999987 777899999999887
No 422
>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0
Probab=21.33 E-value=52 Score=24.97 Aligned_cols=36 Identities=6% Similarity=0.063 Sum_probs=29.4
Q ss_pred HHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCc
Q 027245 119 LAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (226)
Q Consensus 119 L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~p 154 (226)
..+..+.+++.|+.+++++.+....++.+.+..++.
T Consensus 80 ~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~ 115 (217)
T 3m1y_A 80 ALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLD 115 (217)
T ss_dssp HHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcc
Confidence 344566777889999999999888888888888876
No 423
>3iz5_H 60S ribosomal protein L7A (L7AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_H
Probab=21.26 E-value=3.8e+02 Score=22.81 Aligned_cols=56 Identities=11% Similarity=0.010 Sum_probs=39.5
Q ss_pred HHHHhHHHHHHcCCEEEEEeCCC-H-H---HHHHHHHHcCCceeEEecCChHHHHHcCCccc
Q 027245 118 YLAAKKDVMDASGVALVLIGPGS-V-E---QARTFSEQTKFKGEVYADPNHSSYEALSFVSG 174 (226)
Q Consensus 118 ~L~~~~~~l~~~Gv~lVaIs~~~-~-~---~i~~f~~~~~~pfpll~Dp~~~ly~alGv~~~ 174 (226)
-+++.-..++..-+++|+|..|- + + .+-..|++.++||-++ .....+-...|.++.
T Consensus 131 GvneVTklVE~kKAqLVVIA~DVdPiElV~fLPaLC~k~gVPY~iV-k~KarLG~~vgrKtc 191 (258)
T 3iz5_H 131 GLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIV-KGKARLGSIVHKKTA 191 (258)
T ss_dssp SHHHHHHHHHTTCEEEEEEESCCSSTHHHHHHHHHHTTTTCCEEEE-SCHHHHHHHTTCSSC
T ss_pred ccHHHHHHHHcCcceEEEEeCCCChHHHHhHHHHHHHhcCCCeEEE-CCHHHHHHHhCCccc
Confidence 35555556667778899998873 2 2 4566799999999765 455678888887753
No 424
>2zsk_A PH1733, 226AA long hypothetical aspartate racemase; alpha/beta fold, unknown function; 2.55A {Pyrococcus horikoshii}
Probab=21.25 E-value=78 Score=25.48 Aligned_cols=55 Identities=7% Similarity=0.065 Sum_probs=34.6
Q ss_pred HHHHHHhHHHHHHcCCEEEEEeCCCHH-HHHHHHHHcCCceeEEecCChHHHHHcC
Q 027245 116 ADYLAAKKDVMDASGVALVLIGPGSVE-QARTFSEQTKFKGEVYADPNHSSYEALS 170 (226)
Q Consensus 116 l~~L~~~~~~l~~~Gv~lVaIs~~~~~-~i~~f~~~~~~pfpll~Dp~~~ly~alG 170 (226)
.+.+.+..+.+++.|++.|+|.|.+.. .+++.++..++|+-=..|+........+
T Consensus 59 ~~~l~~~~~~L~~~g~d~iviaCnTa~~~~~~l~~~~~iPvi~i~~a~~~~~~~~~ 114 (226)
T 2zsk_A 59 KKILINAAKALERAGAELIAFAANTPHLVFDDVQREVNVPMVSIIDAVAEEILKRG 114 (226)
T ss_dssp HHHHHHHHHHHHHHTCSEEEESSSGGGGGHHHHHHHCSSCBCCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCcHHHHHHHHHHhCCCCEeccHHHHHHHHHHcC
Confidence 444555667788899999999999864 4566666665554322355444444434
No 425
>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0
Probab=21.20 E-value=94 Score=24.08 Aligned_cols=33 Identities=15% Similarity=0.166 Sum_probs=28.0
Q ss_pred HHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCce
Q 027245 123 KDVMDASGVALVLIGPGSVEQARTFSEQTKFKG 155 (226)
Q Consensus 123 ~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~pf 155 (226)
.+.+++.|+.++.|+.++.+.++...++.++..
T Consensus 55 l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~ 87 (191)
T 3n1u_A 55 LKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH 87 (191)
T ss_dssp HHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE
T ss_pred HHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc
Confidence 566778999999999998888888999988764
No 426
>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A
Probab=21.17 E-value=99 Score=23.80 Aligned_cols=33 Identities=15% Similarity=0.145 Sum_probs=28.6
Q ss_pred hHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCc
Q 027245 122 KKDVMDASGVALVLIGPGSVEQARTFSEQTKFK 154 (226)
Q Consensus 122 ~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~p 154 (226)
..+++++.|+.+..++.++.+.++...++.++.
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~ 86 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIE 86 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCS
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCH
Confidence 566778899999999999988899999998875
No 427
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=21.03 E-value=1.2e+02 Score=25.76 Aligned_cols=26 Identities=12% Similarity=0.261 Sum_probs=22.1
Q ss_pred cCCEEEEEeCCCHHHHHHHHHHcCCc
Q 027245 129 SGVALVLIGPGSVEQARTFSEQTKFK 154 (226)
Q Consensus 129 ~Gv~lVaIs~~~~~~i~~f~~~~~~p 154 (226)
.+++|++|.--+++.+++|+++++++
T Consensus 47 ~~~~lvav~d~~~~~a~~~a~~~g~~ 72 (350)
T 4had_A 47 ENCVVTAIASRDLTRAREMADRFSVP 72 (350)
T ss_dssp SSEEEEEEECSSHHHHHHHHHHHTCS
T ss_pred CCeEEEEEECCCHHHHHHHHHHcCCC
Confidence 47889999888888899999998875
No 428
>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*
Probab=20.92 E-value=1.2e+02 Score=23.26 Aligned_cols=52 Identities=8% Similarity=0.001 Sum_probs=35.7
Q ss_pred hHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCceeEEe-cCChHH----HHHcCCcc
Q 027245 122 KKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYA-DPNHSS----YEALSFVS 173 (226)
Q Consensus 122 ~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~pfpll~-Dp~~~l----y~alGv~~ 173 (226)
..+++++.|+.++.|+..+...++.+.++.++...+-. -|+... .+.+|+..
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~~~~~~kpk~~~~~~~~~~~g~~~ 117 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKLVEDRCATLGITHLYQGQSNKLIAFSDLLEKLAIAP 117 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCEEECSCSCSHHHHHHHHHHHTCCG
T ss_pred HHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCceeecCCCCCHHHHHHHHHHcCCCH
Confidence 45667788999999999988889999999887632211 244444 34456653
No 429
>2vvt_A Glutamate racemase; isomerase, peptidoglycan synthesis, cell WALL biogenesis/degradation, cell shape, benzyl purine, MURI inhibitor; HET: I24 DGL; 1.65A {Enterococcus faecalis} PDB: 2jfp_A* 2jfo_A* 2jfu_A 2jfv_A* 2jfw_A*
Probab=20.89 E-value=1.6e+02 Score=24.88 Aligned_cols=58 Identities=7% Similarity=0.130 Sum_probs=37.3
Q ss_pred EEEEEecCCCChhH---HHHHHHHH-HhHHHHHHcCCEEEEEeCCCHH--HHHHHHHHcCCceeEE
Q 027245 99 AVVAFARHFGCVLC---RKRADYLA-AKKDVMDASGVALVLIGPGSVE--QARTFSEQTKFKGEVY 158 (226)
Q Consensus 99 vVVvF~R~~~Cp~C---~~el~~L~-~~~~~l~~~Gv~lVaIs~~~~~--~i~~f~~~~~~pfpll 158 (226)
.++.|--...+|.- .+++.+.. +..+.+.+.|++.|+|.|.+.. .+++.++..++ ||+
T Consensus 51 ~~iy~~D~~~~pyG~~s~~~i~~~~~~~~~~L~~~g~d~IVIACNTas~~~l~~lr~~~~i--PVi 114 (290)
T 2vvt_A 51 RLIYLGDTARCPYGPRPAEQVVQFTWEMADFLLKKRIKMLVIACNTATAVALEEIKAALPI--PVV 114 (290)
T ss_dssp CEEEEECTTTCCCTTSCHHHHHHHHHHHHHHHHTTTCSEEEECCHHHHHHHHHHHHHHCSS--CEE
T ss_pred cEEEecccccCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEeCcchhHHHHHHHHHhCCC--CEE
Confidence 34555555566653 44444433 3456677889999999999874 46777777655 554
No 430
>3ojc_A Putative aspartate/glutamate racemase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; 1.75A {Yersinia pestis}
Probab=20.80 E-value=83 Score=25.77 Aligned_cols=55 Identities=9% Similarity=0.124 Sum_probs=35.4
Q ss_pred HHHHHhHHHHHHcCCEEEEEeCCCHH-HHHHHHHHcCCceeEEecCChHHHHHcCC
Q 027245 117 DYLAAKKDVMDASGVALVLIGPGSVE-QARTFSEQTKFKGEVYADPNHSSYEALSF 171 (226)
Q Consensus 117 ~~L~~~~~~l~~~Gv~lVaIs~~~~~-~i~~f~~~~~~pfpll~Dp~~~ly~alGv 171 (226)
+.+.+..+.+++.|++.|+|.|.+.. .++...+..++|+-=..|+..+.....+.
T Consensus 63 ~~l~~~~~~L~~~g~~~iviaCNTa~~~~~~l~~~~~iPvi~i~~~~~~~a~~~~~ 118 (231)
T 3ojc_A 63 QLLSNAAISLKHAGAEVIVVCTNTMHKVADDIEAACGLPLLHIADATAVQIKQQGI 118 (231)
T ss_dssp HHHHHHHHHHHHHTCCEEEECSSGGGGGHHHHHHHHCSCBCCHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCchHHHHHHHHHhCCCCEeccHHHHHHHHHHcCC
Confidence 45555667788899999999999853 45666666666543334555444444443
No 431
>3fy4_A 6-4 photolyase; DNA repair, clock cryptochrome; HET: MES FAD; 2.70A {Arabidopsis thaliana}
Probab=20.10 E-value=1e+02 Score=28.81 Aligned_cols=46 Identities=13% Similarity=0.049 Sum_probs=36.3
Q ss_pred HHHHHHHhHHHHHHcCCEEEEEeCCCHHHHHHHHHHcCCceeEEecC
Q 027245 115 RADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYADP 161 (226)
Q Consensus 115 el~~L~~~~~~l~~~Gv~lVaIs~~~~~~i~~f~~~~~~pfpll~Dp 161 (226)
-...|.++.++|++.|..|++...+..+.+.++++++++.- |+.+.
T Consensus 66 l~~sL~~L~~~L~~~G~~L~v~~G~~~~vl~~L~~~~~~~~-V~~n~ 111 (537)
T 3fy4_A 66 LLESLKDLDSSLKKLGSRLLVFKGEPGEVLVRCLQEWKVKR-LCFEY 111 (537)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEESCHHHHHHHHHTTSCEEE-EEECC
T ss_pred HHHHHHHHHHHHHHcCCceEEEECCHHHHHHHHHHHcCCCE-EEEec
Confidence 34678888899999999999887666678999999987653 66654
Done!