Your job contains 1 sequence.
>027247
MDYSRYFGLSTSSSRNYQSTLKSQFADFCIDFEDIEEDDYEEVKGEYEYPCPFCSEDFDL
VGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVDHITTQHGNISNSWHKLKLHKGNSNSTI
SSLRKELQNAHFQSLLARSSSSVSSSKKTSDPWLSFIYNMPTADESESIQPALSTGEGAE
DKSSCEKTFETNAQQSSLSNEDHLEKANRSNFAQGLLFSTIMDDGL
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 027247
(226 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2078062 - symbol:AT3G05700 species:3702 "Arabi... 402 1.9e-37 1
TAIR|locus:2148528 - symbol:AT5G26990 species:3702 "Arabi... 383 1.9e-35 1
TAIR|locus:2155934 - symbol:HRB1 "HYPERSENSITIVE TO RED A... 379 5.1e-35 1
TAIR|locus:2137819 - symbol:AT4G02200 species:3702 "Arabi... 315 3.1e-28 1
TAIR|locus:2196125 - symbol:AT1G02750 species:3702 "Arabi... 300 1.2e-26 1
TAIR|locus:2083363 - symbol:AT3G06760 species:3702 "Arabi... 295 4.0e-26 1
UNIPROTKB|I3LV30 - symbol:RNF114 "RING finger protein 114... 106 0.00026 1
UNIPROTKB|Q4U5R4 - symbol:RNF114 "RING finger protein 114... 107 0.00044 1
UNIPROTKB|Q6J1I8 - symbol:RNF114 "RING finger protein 114... 106 0.00059 1
RGD|1303139 - symbol:Rnf114 "ring finger protein 114" spe... 106 0.00059 1
UNIPROTKB|Q6J2U6 - symbol:Rnf114 "RING finger protein 114... 106 0.00059 1
MGI|MGI:1933159 - symbol:Rnf114 "ring finger protein 114"... 105 0.00078 1
>TAIR|locus:2078062 [details] [associations]
symbol:AT3G05700 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0009414 "response to water
deprivation" evidence=ISS] Pfam:PF05605 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AC011620 HOGENOM:HOG000238690
InterPro:IPR008598 EMBL:BT004008 EMBL:BT005154 IPI:IPI00522575
RefSeq:NP_187221.2 UniGene:At.40625 EnsemblPlants:AT3G05700.1
GeneID:819739 KEGG:ath:AT3G05700 TAIR:At3g05700 eggNOG:NOG242010
InParanoid:Q84J70 OMA:HANIFKM PhylomeDB:Q84J70
ProtClustDB:CLSN2916570 Genevestigator:Q84J70 Uniprot:Q84J70
Length = 223
Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 84/182 (46%), Positives = 109/182 (59%)
Query: 48 EYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVDHITTQHGNISNSWH 107
E+ CPFCS+ FD+V LCCHIDE+HP+EAK+GVCPVC RV +DMV HIT QH NI
Sbjct: 43 EFACPFCSDYFDIVSLCCHIDEDHPMEAKNGVCPVCAVRVGVDMVAHITLQHANIFKMHR 102
Query: 108 KLKLHKGNSNSTISSLRKELQNAHFQSLLARXX---XXXXXXXXXXDPWLSFIYNMPTAD 164
K K +G S ST+S LR+E + +FQSL DP LS + P AD
Sbjct: 103 KRKPRRGGSYSTLSILRREFPDGNFQSLFGGSSCIVSSSSSSNVAADPLLSSFIS-PIAD 161
Query: 165 ESESIQPALSTGEGAEDKSSCEKTFETNAQQSSLSNEDHLEKANRSNFAQGLLFSTIMDD 224
+ + +S G K++ + E NA+++SLS EDH +K RS F + LL STI+DD
Sbjct: 162 GFFTTESCISAETGPVKKTTIQCLPEQNAKKTSLSAEDHKQKLKRSEFVRELLSSTILDD 221
Query: 225 GL 226
L
Sbjct: 222 SL 223
>TAIR|locus:2148528 [details] [associations]
symbol:AT5G26990 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0009414 "response to water
deprivation" evidence=ISS] Pfam:PF05605 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AF007270 HOGENOM:HOG000238690
InterPro:IPR008598 ProtClustDB:CLSN2916570 EMBL:BT011220
EMBL:BT012151 IPI:IPI00528556 PIR:T01774 RefSeq:NP_198051.1
UniGene:At.43013 EnsemblPlants:AT5G26990.1 GeneID:832757
KEGG:ath:AT5G26990 TAIR:At5g26990 eggNOG:NOG318678
InParanoid:Q6NM26 OMA:FREEYAC PhylomeDB:Q6NM26
Genevestigator:Q6NM26 Uniprot:Q6NM26
Length = 222
Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
Identities = 75/181 (41%), Positives = 106/181 (58%)
Query: 48 EYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVDHITTQHGNISNSWH 107
EY CPFCS+ FD+V LCCHIDE+HP++AK+GVCP+C +V+ DM+ HIT QH N+
Sbjct: 43 EYACPFCSDYFDIVSLCCHIDEDHPMDAKNGVCPICAVKVSSDMIAHITLQHANMFKVTR 102
Query: 108 KLKLHKGNSNSTISSLRKELQNAHFQSLL--ARXXXXXXXXXXXXDPWLSFIYNMPTADE 165
K K +G + S +S L++E + +FQSL DP LS + P AD+
Sbjct: 103 KRKSRRGGAQSMLSILKREFPDGNFQSLFEGTSRAVSSSSASIAADPLLSSFIS-PMADD 161
Query: 166 SESIQPALSTGEGAEDKSSCEKTFETNAQQSSLSNEDHLEKANRSNFAQGLLFSTIMDDG 225
+ +L + K+ + E N ++ SLS EDH EK +S F QG+L S I++DG
Sbjct: 162 FFISESSLCADTSSAKKTLNQSLPERNVEKQSLSAEDHREKLKQSEFVQGILSSMILEDG 221
Query: 226 L 226
L
Sbjct: 222 L 222
>TAIR|locus:2155934 [details] [associations]
symbol:HRB1 "HYPERSENSITIVE TO RED AND BLUE" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0009414 "response to water deprivation" evidence=ISS]
[GO:0009785 "blue light signaling pathway" evidence=IMP]
[GO:0010161 "red light signaling pathway" evidence=IMP]
Pfam:PF05605 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
EMBL:AB016872 GO:GO:0010161 GO:GO:0009785 HOGENOM:HOG000238690
InterPro:IPR008598 EMBL:AF372963 EMBL:AY133584 IPI:IPI00542988
RefSeq:NP_199734.2 UniGene:At.64279 STRING:Q9FJ17 PaxDb:Q9FJ17
PRIDE:Q9FJ17 DNASU:834983 EnsemblPlants:AT5G49230.1 GeneID:834983
KEGG:ath:AT5G49230 TAIR:At5g49230 eggNOG:NOG317145
InParanoid:Q9FJ17 OMA:CADEFDI PhylomeDB:Q9FJ17
ProtClustDB:CLSN2699160 Genevestigator:Q9FJ17 Uniprot:Q9FJ17
Length = 211
Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
Identities = 80/178 (44%), Positives = 112/178 (62%)
Query: 48 EYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVDHITTQHGNISNSWH 107
E+ CPFC+++FD+VGLCCHID HPVEAK+GVCPVC +V +D+V HITTQHGN+
Sbjct: 42 EFMCPFCADEFDIVGLCCHIDVNHPVEAKNGVCPVCTKKVGLDIVGHITTQHGNVFKVQR 101
Query: 108 KLKLHKGNSNSTISSLRKELQNAHFQSLLARXXXXXXXXXXXXDPWLS-FIYNMPTADES 166
+ +L KG +ST +L+KEL+ A+ QSL DP LS F++ P+A
Sbjct: 102 RRRLRKGGYSSTYLTLKKELREANLQSL-GGSSTFIPSSNIDSDPLLSSFMFKPPSAI-- 158
Query: 167 ESIQPALSTGEGAEDKSSCEKTFETNAQQSSLSNEDHLEKANRSNFAQGLLFSTIMDD 224
P ++ G+ S + T ++ QQ S SNED EKA +S F +GLL+ST+++D
Sbjct: 159 ----P-ITEGDSVAQVSP-KDTSKSKIQQESFSNEDQ-EKAKKSKFVRGLLWSTMLED 209
>TAIR|locus:2137819 [details] [associations]
symbol:AT4G02200 species:3702 "Arabidopsis thaliana"
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009414 "response to water deprivation" evidence=ISS]
InterPro:IPR015880 SMART:SM00355 Pfam:PF05605 EMBL:CP002687
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008598 IPI:IPI00938744
RefSeq:NP_001154200.1 UniGene:At.48823 UniGene:At.73013
EnsemblPlants:AT4G02200.3 GeneID:827516 KEGG:ath:AT4G02200
OMA:DESYSAF Uniprot:F4JH94
Length = 228
Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 79/192 (41%), Positives = 103/192 (53%)
Query: 48 EYPCPFCSEDFDLVGLCCHIDEEHPVEAKSG--------------VCPVCVTRVTMDMVD 93
+YPCPFCS+D+DLV LC HIDEEH ++A +G +CPVC RV M MVD
Sbjct: 42 DYPCPFCSDDYDLVELCHHIDEEHQLDANNGFLHEAVSCKFRLFIICPVCSRRVKMHMVD 101
Query: 94 HITTQHGNISNSWHKLKLHKGNSNSTIS-SLRKELQNAHFQSLLARXXXXXXXXXXXXDP 152
HITTQH ++ +L+K S S S RK LQ SL+ DP
Sbjct: 102 HITTQHRDVFK-----RLYKDESYSAFSPGTRKYLQ-----SLIDEPLSTNHTSKSVLDP 151
Query: 153 WLSFIYNMPTADESESIQPALSTGEGAEDKSSCEKTFETNAQQSS-LSNEDHLEKANRSN 211
LSFIYN P+ +S+ +QP S+ ED S + E + + S LS+ + LEKA +
Sbjct: 152 LLSFIYNPPSPKKSKLVQPDSSSEASMEDNSLIRDSTEKDWESPSPLSDTELLEKAKKRE 211
Query: 212 FAQGLLFSTIMD 223
F QGL+ S I D
Sbjct: 212 FVQGLISSAIFD 223
>TAIR|locus:2196125 [details] [associations]
symbol:AT1G02750 species:3702 "Arabidopsis thaliana"
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009414 "response to water deprivation" evidence=ISS]
[GO:0006914 "autophagy" evidence=RCA] InterPro:IPR015880
SMART:SM00355 Pfam:PF05605 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0005737 GO:GO:0008270 EMBL:AC022521
EMBL:AC009525 EMBL:AK118790 EMBL:BT030081 IPI:IPI00521672
RefSeq:NP_171775.2 UniGene:At.42581 STRING:Q8GWK1
EnsemblPlants:AT1G02750.1 GeneID:839432 KEGG:ath:AT1G02750
TAIR:At1g02750 eggNOG:NOG301878 HOGENOM:HOG000238690
InParanoid:Q8GWK1 OMA:HITSHHR PhylomeDB:Q8GWK1
ProtClustDB:CLSN2685726 Genevestigator:Q8GWK1 InterPro:IPR008598
Uniprot:Q8GWK1
Length = 221
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 78/217 (35%), Positives = 108/217 (49%)
Query: 10 STSSSRNYQSTLKSQFAXXXXXXXXXXXXXXXXVKGEYEYPCPFCSEDFDLVGLCCHIDE 69
S+ SSR+Y+S +++ + EYPCPFC+ D+DLV LC HIDE
Sbjct: 10 SSGSSRSYRSETAAKYQSGPYQDLEEFEEVDDDIA--VEYPCPFCASDYDLVELCHHIDE 67
Query: 70 EHPVEAKSGVCPVCVTRVTMDMVDHITTQHGNISNSWHKLKLHKGNSNSTISSLRKELQN 129
EH EA +G+CPVC RV M MVDHIT+ H ++ S K ++ + +S K LQ
Sbjct: 68 EHRHEANNGICPVCSKRVKMHMVDHITSHHRDVLKSEQKEMSYR--EDPYLSD--KYLQ- 122
Query: 130 AHFQSLLARXXXXXXXXXXXXDPWLSFIYNMPTADESESIQPALSTGEGAEDKSSCEKTF 189
H L D +LSFI N ++++ + P S EDK+ + +
Sbjct: 123 PHLDELPPSMNHHQHPSKHVSDQFLSFINNSALPNQTKLVLPDSSV----EDKNPIKDSS 178
Query: 190 ETNAQQSS--LSNEDHLEKANRSNFAQGLLFSTIMDD 224
SS LS+ D LEKA + F QGLL S + DD
Sbjct: 179 AAKEGTSSCPLSDSDKLEKAKKCEFVQGLLSSAMFDD 215
>TAIR|locus:2083363 [details] [associations]
symbol:AT3G06760 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0009414 "response to water
deprivation" evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM]
Pfam:PF05605 EMBL:CP002686 InterPro:IPR008598 IPI:IPI00938908
RefSeq:NP_001154594.1 UniGene:At.40468 PRIDE:F4JC45
EnsemblPlants:AT3G06760.2 GeneID:819861 KEGG:ath:AT3G06760
OMA:DATWPEV Uniprot:F4JC45
Length = 234
Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 71/188 (37%), Positives = 107/188 (56%)
Query: 48 EYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGV---CPVCVTR------VTMDMVDHITTQ 98
E+ CPFC+EDFD+VGLCCHIDEEHPVEAK+GV + V + + + I
Sbjct: 46 EFICPFCAEDFDIVGLCCHIDEEHPVEAKNGVDQFFALVVIQCCNFWFIPCESNLGIFRL 105
Query: 99 HG-NISNSWHKLKLHKGNSNSTISSLRKELQNAHFQSLLARXXXXXXXXXXXXDPWLS-F 156
G ++ + +L +G +ST +L+KEL+ A+ QSLL DP LS F
Sbjct: 106 FGRSVLYALRGRRLRRGGYSSTYLALKKELREANLQSLLGGSSSFTSSTNIDSDPLLSSF 165
Query: 157 IYNMPTADESESIQPALSTGEGAEDKSSCEKTFETNAQQSSLSNEDHLEKANRSNFAQGL 216
++N P+ ++S + T A K S +++ + + Q++ LS ED EKA +S F +GL
Sbjct: 166 MFNSPSVNQSANKSATPVTVGNAATKVSIKESLKRDIQEAPLSGEDQ-EKAKKSEFVRGL 224
Query: 217 LFSTIMDD 224
L ST+++D
Sbjct: 225 LLSTMLED 232
>UNIPROTKB|I3LV30 [details] [associations]
symbol:RNF114 "RING finger protein 114" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR015880 SMART:SM00355
Pfam:PF05605 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008598
GeneTree:ENSGT00530000063064 OMA:IEHIQRR Ensembl:ENSSSCT00000025741
Uniprot:I3LV30
Length = 181
Score = 106 (42.4 bits), Expect = 0.00026, P = 0.00026
Identities = 23/65 (35%), Positives = 32/65 (49%)
Query: 43 VKGEYEYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMD-------MVDH 94
V Y +PCP+C E +FD GL H H + KS VCP+C + D ++H
Sbjct: 88 VPNRYTFPCPYCPEKNFDQEGLVEHCKLVHSTDTKSVVCPICASMPWGDPNYRSANFIEH 147
Query: 95 ITTQH 99
I +H
Sbjct: 148 IQRRH 152
>UNIPROTKB|Q4U5R4 [details] [associations]
symbol:RNF114 "RING finger protein 114" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR015880 PROSITE:PS50089 SMART:SM00184
SMART:SM00355 Prosite:PS00518 Pfam:PF05605 GO:GO:0007275
GO:GO:0030154 GO:GO:0046872 GO:GO:0008270 GO:GO:0007283
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR008598 EMBL:DQ010409 EMBL:BC102412
EMBL:BT030581 IPI:IPI00712043 RefSeq:NP_001019702.1
UniGene:Bt.64649 ProteinModelPortal:Q4U5R4
Ensembl:ENSBTAT00000039156 GeneID:513479 KEGG:bta:513479 CTD:55905
eggNOG:NOG145063 GeneTree:ENSGT00530000063064 HOGENOM:HOG000230946
HOVERGEN:HBG074331 InParanoid:Q4U5R4 KO:K15697 OMA:IEHIQRR
OrthoDB:EOG4CVG7Q NextBio:20870874 Uniprot:Q4U5R4
Length = 230
Score = 107 (42.7 bits), Expect = 0.00044, P = 0.00044
Identities = 19/44 (43%), Positives = 25/44 (56%)
Query: 43 VKGEYEYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVCVT 85
V Y +PCP+C E +FD GL H H + KS VCP+C +
Sbjct: 137 VPNRYTFPCPYCPEKNFDQEGLVEHCKLSHSTDTKSVVCPICAS 180
>UNIPROTKB|Q6J1I8 [details] [associations]
symbol:RNF114 "RING finger protein 114" species:9823 "Sus
scrofa" [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR001841 InterPro:IPR015880 PROSITE:PS50089
SMART:SM00184 SMART:SM00355 Prosite:PS00518 Pfam:PF05605
GO:GO:0007275 GO:GO:0030154 GO:GO:0046872 GO:GO:0008270
GO:GO:0007283 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR008598 CTD:55905 HOVERGEN:HBG074331
KO:K15697 EMBL:AY606064 RefSeq:NP_001001869.1 UniGene:Ssc.32113
ProteinModelPortal:Q6J1I8 GeneID:414917 KEGG:ssc:414917
Uniprot:Q6J1I8
Length = 228
Score = 106 (42.4 bits), Expect = 0.00059, P = 0.00059
Identities = 23/65 (35%), Positives = 32/65 (49%)
Query: 43 VKGEYEYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMD-------MVDH 94
V Y +PCP+C E +FD GL H H + KS VCP+C + D ++H
Sbjct: 135 VPNRYTFPCPYCPEKNFDQEGLVEHCKLVHSTDTKSVVCPICASMPWGDPNYRSANFIEH 194
Query: 95 ITTQH 99
I +H
Sbjct: 195 IQRRH 199
>RGD|1303139 [details] [associations]
symbol:Rnf114 "ring finger protein 114" species:10116 "Rattus
norvegicus" [GO:0005622 "intracellular" evidence=IEA;ISO]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] InterPro:IPR001841 InterPro:IPR015880 PROSITE:PS50089
SMART:SM00184 SMART:SM00355 RGD:1303139 Prosite:PS00518
Pfam:PF05605 GO:GO:0007275 GO:GO:0030154 GO:GO:0046872
GO:GO:0008270 GO:GO:0007283 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR008598 CTD:55905
eggNOG:NOG145063 GeneTree:ENSGT00530000063064 HOGENOM:HOG000230946
HOVERGEN:HBG074331 KO:K15697 OrthoDB:EOG4CVG7Q EMBL:AY603473
EMBL:BC098633 IPI:IPI00421945 RefSeq:NP_001001517.1
UniGene:Rn.49925 ProteinModelPortal:Q6J2U6 PRIDE:Q6J2U6
Ensembl:ENSRNOT00000012675 GeneID:362277 KEGG:rno:362277
UCSC:RGD:1303139 InParanoid:Q6J2U6 NextBio:679307
ArrayExpress:Q6J2U6 Genevestigator:Q6J2U6
GermOnline:ENSRNOG00000009525 Uniprot:Q6J2U6
Length = 229
Score = 106 (42.4 bits), Expect = 0.00059, P = 0.00059
Identities = 19/44 (43%), Positives = 25/44 (56%)
Query: 43 VKGEYEYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVCVT 85
V Y +PCP+C E +FD GL H H + KS VCP+C +
Sbjct: 136 VPNRYTFPCPYCPEKNFDQEGLVEHCKLTHSTDTKSVVCPICAS 179
>UNIPROTKB|Q6J2U6 [details] [associations]
symbol:Rnf114 "RING finger protein 114" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR015880 PROSITE:PS50089 SMART:SM00184
SMART:SM00355 RGD:1303139 Prosite:PS00518 Pfam:PF05605
GO:GO:0007275 GO:GO:0030154 GO:GO:0046872 GO:GO:0008270
GO:GO:0007283 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR008598 CTD:55905 eggNOG:NOG145063
GeneTree:ENSGT00530000063064 HOGENOM:HOG000230946
HOVERGEN:HBG074331 KO:K15697 OrthoDB:EOG4CVG7Q EMBL:AY603473
EMBL:BC098633 IPI:IPI00421945 RefSeq:NP_001001517.1
UniGene:Rn.49925 ProteinModelPortal:Q6J2U6 PRIDE:Q6J2U6
Ensembl:ENSRNOT00000012675 GeneID:362277 KEGG:rno:362277
UCSC:RGD:1303139 InParanoid:Q6J2U6 NextBio:679307
ArrayExpress:Q6J2U6 Genevestigator:Q6J2U6
GermOnline:ENSRNOG00000009525 Uniprot:Q6J2U6
Length = 229
Score = 106 (42.4 bits), Expect = 0.00059, P = 0.00059
Identities = 19/44 (43%), Positives = 25/44 (56%)
Query: 43 VKGEYEYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVCVT 85
V Y +PCP+C E +FD GL H H + KS VCP+C +
Sbjct: 136 VPNRYTFPCPYCPEKNFDQEGLVEHCKLTHSTDTKSVVCPICAS 179
>MGI|MGI:1933159 [details] [associations]
symbol:Rnf114 "ring finger protein 114" species:10090 "Mus
musculus" [GO:0005622 "intracellular" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR015880
PROSITE:PS50089 SMART:SM00184 SMART:SM00355 MGI:MGI:1933159
Prosite:PS00518 Pfam:PF05605 GO:GO:0007275 GO:GO:0030154
GO:GO:0046872 GO:GO:0008270 GO:GO:0007283 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR008598 CTD:55905 eggNOG:NOG145063
GeneTree:ENSGT00530000063064 HOGENOM:HOG000230946
HOVERGEN:HBG074331 KO:K15697 OMA:IEHIQRR OrthoDB:EOG4CVG7Q
ChiTaRS:RNF114 EMBL:AF282919 EMBL:AF502145 EMBL:AK088441
EMBL:AK139030 EMBL:AK148290 EMBL:AK148392 EMBL:AK150086
EMBL:AK150263 EMBL:AK152687 EMBL:AK153452 EMBL:AK159818
EMBL:BC054416 EMBL:BC085146 IPI:IPI00113520 RefSeq:NP_109668.2
UniGene:Mm.22225 ProteinModelPortal:Q9ET26 SMR:Q9ET26 STRING:Q9ET26
PhosphoSite:Q9ET26 REPRODUCTION-2DPAGE:Q9ET26 PaxDb:Q9ET26
PRIDE:Q9ET26 Ensembl:ENSMUST00000078050 Ensembl:ENSMUST00000109214
GeneID:81018 KEGG:mmu:81018 InParanoid:Q9ET26 NextBio:350386
Bgee:Q9ET26 Genevestigator:Q9ET26 GermOnline:ENSMUSG00000006418
Uniprot:Q9ET26
Length = 229
Score = 105 (42.0 bits), Expect = 0.00078, P = 0.00078
Identities = 18/44 (40%), Positives = 25/44 (56%)
Query: 43 VKGEYEYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVCVT 85
+ Y +PCP+C E +FD GL H H + KS VCP+C +
Sbjct: 136 IPNRYTFPCPYCPEKNFDQEGLVEHCKLTHSTDTKSVVCPICAS 179
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.128 0.381 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 226 198 0.00083 111 3 11 23 0.38 33
31 0.45 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 12
No. of states in DFA: 607 (65 KB)
Total size of DFA: 184 KB (2106 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.55u 0.19s 17.74t Elapsed: 00:00:01
Total cpu time: 17.55u 0.19s 17.74t Elapsed: 00:00:01
Start: Fri May 10 06:47:18 2013 End: Fri May 10 06:47:19 2013