BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027247
(226 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q84J70|DI193_ARATH Protein DEHYDRATION-INDUCED 19 homolog 3 OS=Arabidopsis thaliana
GN=DI19-3 PE=1 SV=1
Length = 223
Score = 167 bits (424), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 102/230 (44%), Positives = 139/230 (60%), Gaps = 11/230 (4%)
Query: 1 MDYSRYFGLSTSSSRNYQSTLKSQFADFCIDFEDIE-EDDYEEVKGEYEYPCPFCSEDFD 59
MD + S++R YQ S+ +D + FE+I+ E+++ E E+ CPFCS+ FD
Sbjct: 1 MDSDSWSDRLASATRRYQLAFPSR-SDTFLGFEEIDGEEEFRE-----EFACPFCSDYFD 54
Query: 60 LVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVDHITTQHGNISNSWHKLKLHKGNSNST 119
+V LCCHIDE+HP+EAK+GVCPVC RV +DMV HIT QH NI K K +G S ST
Sbjct: 55 IVSLCCHIDEDHPMEAKNGVCPVCAVRVGVDMVAHITLQHANIFKMHRKRKPRRGGSYST 114
Query: 120 ISSLRKELQNAHFQSLLA---RSSSSVSSSKKTSDPWLSFIYNMPTADESESIQPALSTG 176
+S LR+E + +FQSL SS SSS +DP LS + P AD + + +S
Sbjct: 115 LSILRREFPDGNFQSLFGGSSCIVSSSSSSNVAADPLLSSFIS-PIADGFFTTESCISAE 173
Query: 177 EGAEDKSSCEKTFETNAQQSSLSNEDHLEKANRSNFAQGLLFSTIMDDGL 226
G K++ + E NA+++SLS EDH +K RS F + LL STI+DD L
Sbjct: 174 TGPVKKTTIQCLPEQNAKKTSLSAEDHKQKLKRSEFVRELLSSTILDDSL 223
>sp|Q8VXU6|DI194_ARATH Protein DEHYDRATION-INDUCED 19 homolog 4 OS=Arabidopsis thaliana
GN=DI19-4 PE=1 SV=1
Length = 224
Score = 167 bits (424), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 129/190 (67%), Gaps = 6/190 (3%)
Query: 40 YEEVKGE----YEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVDHI 95
YE+++GE E+ CPFC+EDFD+VGLCCHIDEEHPVEAK+GVCPVC RV +D+V HI
Sbjct: 34 YEDLEGEDDLKAEFICPFCAEDFDIVGLCCHIDEEHPVEAKNGVCPVCTKRVGLDIVGHI 93
Query: 96 TTQHGNISNSWHKLKLHKGNSNSTISSLRKELQNAHFQSLLARSSSSVSSSKKTSDPWL- 154
TTQH N + +L +G +ST +L+KEL+ A+ QSLL SSS SS+ SDP L
Sbjct: 94 TTQHANFFKVQRRRRLRRGGYSSTYLALKKELREANLQSLLGGSSSFTSSTNIDSDPLLS 153
Query: 155 SFIYNMPTADESESIQPALSTGEGAEDKSSCEKTFETNAQQSSLSNEDHLEKANRSNFAQ 214
SF++N P+ ++S + T A K S +++ + + Q++ LS ED EKA +S F +
Sbjct: 154 SFMFNSPSVNQSANKSATPVTVGNAATKVSIKESLKRDIQEAPLSGEDQ-EKAKKSEFVR 212
Query: 215 GLLFSTIMDD 224
GLL ST+++D
Sbjct: 213 GLLLSTMLED 222
>sp|Q6NM26|DI196_ARATH Protein DEHYDRATION-INDUCED 19 homolog 6 OS=Arabidopsis thaliana
GN=DI19-6 PE=1 SV=1
Length = 222
Score = 160 bits (406), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 95/229 (41%), Positives = 136/229 (59%), Gaps = 10/229 (4%)
Query: 1 MDYSRYFGLSTSSSRNYQSTLKSQFADFCIDFEDIE-EDDYEEVKGEYEYPCPFCSEDFD 59
MD + S+SR YQ S+ +F + FE+IE EDD+ E EY CPFCS+ FD
Sbjct: 1 MDSDSWSDRLASASRRYQLDFLSRSDNF-LGFEEIEGEDDFRE-----EYACPFCSDYFD 54
Query: 60 LVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVDHITTQHGNISNSWHKLKLHKGNSNST 119
+V LCCHIDE+HP++AK+GVCP+C +V+ DM+ HIT QH N+ K K +G + S
Sbjct: 55 IVSLCCHIDEDHPMDAKNGVCPICAVKVSSDMIAHITLQHANMFKVTRKRKSRRGGAQSM 114
Query: 120 ISSLRKELQNAHFQSLL--ARSSSSVSSSKKTSDPWLSFIYNMPTADESESIQPALSTGE 177
+S L++E + +FQSL + S SS+ +DP LS + P AD+ + +L
Sbjct: 115 LSILKREFPDGNFQSLFEGTSRAVSSSSASIAADPLLSSFIS-PMADDFFISESSLCADT 173
Query: 178 GAEDKSSCEKTFETNAQQSSLSNEDHLEKANRSNFAQGLLFSTIMDDGL 226
+ K+ + E N ++ SLS EDH EK +S F QG+L S I++DGL
Sbjct: 174 SSAKKTLNQSLPERNVEKQSLSAEDHREKLKQSEFVQGILSSMILEDGL 222
>sp|Q9FJ17|DI197_ARATH Protein DEHYDRATION-INDUCED 19 homolog 7 OS=Arabidopsis thaliana
GN=DI19-7 PE=1 SV=2
Length = 211
Score = 158 bits (400), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 90/194 (46%), Positives = 126/194 (64%), Gaps = 19/194 (9%)
Query: 34 DIE-EDDYEEVKGEYEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMV 92
D+E EDD + E+ CPFC+++FD+VGLCCHID HPVEAK+GVCPVC +V +D+V
Sbjct: 32 DVEGEDDLKA-----EFMCPFCADEFDIVGLCCHIDVNHPVEAKNGVCPVCTKKVGLDIV 86
Query: 93 DHITTQHGNISNSWHKLKLHKGNSNSTISSLRKELQNAHFQSLLARSSSSVSSSKKTSDP 152
HITTQHGN+ + +L KG +ST +L+KEL+ A+ QS L SS+ + SS SDP
Sbjct: 87 GHITTQHGNVFKVQRRRRLRKGGYSSTYLTLKKELREANLQS-LGGSSTFIPSSNIDSDP 145
Query: 153 WL-SFIYNMPTADESESIQPALSTGEG-AEDKSSCEKTFETNAQQSSLSNEDHLEKANRS 210
L SF++ P+ A+ EG + + S + T ++ QQ S SNED EKA +S
Sbjct: 146 LLSSFMFKPPS---------AIPITEGDSVAQVSPKDTSKSKIQQESFSNEDQ-EKAKKS 195
Query: 211 NFAQGLLFSTIMDD 224
F +GLL+ST+++D
Sbjct: 196 KFVRGLLWSTMLED 209
>sp|O04259|DI195_ARATH Protein DEHYDRATION-INDUCED 19 homolog 5 OS=Arabidopsis thaliana
GN=DI19-5 PE=1 SV=2
Length = 214
Score = 147 bits (371), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 88/199 (44%), Positives = 118/199 (59%), Gaps = 23/199 (11%)
Query: 29 CIDFEDIEEDDYEEVKGEYEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT 88
CI+FED +E +YPCPFCS+D+DLV LC HIDEEH ++A +G+CPVC RV
Sbjct: 30 CIEFEDDDE-------MAVDYPCPFCSDDYDLVELCHHIDEEHQLDANNGICPVCSRRVK 82
Query: 89 MDMVDHITTQHGNISNSWHKLKLHKGNSNSTISSLRKELQNAHFQSLLARSSSSVSSSKK 148
M MVDHITTQH ++ +L+K S S S ++ + QSL+ S+ +SK
Sbjct: 83 MHMVDHITTQHRDVFK-----RLYKDESYSAFSPGTRK----YLQSLIDEPLSTNHTSKS 133
Query: 149 TSDPWLSFIYNMPTADESESIQPALSTGEGAEDKS----SCEKTFETNAQQSSLSNEDHL 204
DP LSFIYN P+ +S+ +QP S+ ED S S EK +E+ S LS+ + L
Sbjct: 134 VLDPLLSFIYNPPSPKKSKLVQPDSSSEASMEDNSLIRDSTEKDWES---PSPLSDTELL 190
Query: 205 EKANRSNFAQGLLFSTIMD 223
EKA + F QGL+ S I D
Sbjct: 191 EKAKKREFVQGLISSAIFD 209
>sp|Q5W794|DI192_ORYSJ Protein DEHYDRATION-INDUCED 19 homolog 2 OS=Oryza sativa subsp.
japonica GN=DI19-2 PE=2 SV=2
Length = 233
Score = 141 bits (356), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 83/204 (40%), Positives = 118/204 (57%), Gaps = 8/204 (3%)
Query: 27 DFCIDFEDIEEDDYEEVK---GEYEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVC 83
D + F+D + EEV+ G Y CPFC EDFD V CCH+D+EH VEAKSGVCP+C
Sbjct: 29 DLYMGFDDADAAGVEEVEARGGGEAYNCPFCGEDFDFVAFCCHVDDEHAVEAKSGVCPIC 88
Query: 84 VTRVTMDMVDHITTQHGNISNSWHKLKLHK--GNSNSTISSLRKELQNAHFQSLLARSSS 141
TRV +D++ H+T QHG+ + ++ K S+S +S LRK+L++ QS L SS
Sbjct: 89 ATRVGVDLIGHLTMQHGSYFKMQRRRRVRKISSGSHSLLSLLRKDLRDGSLQSFLGGSSY 148
Query: 142 SVSSSKKTSDPWL-SFIYNMPTADESESIQPALSTGEGAEDKSSCEKTFETNAQQSSLSN 200
+ DP+L S I ++P A+ S+ + S +K +KT E + SLS
Sbjct: 149 VSNPPAAAPDPFLSSLICSLPVAEPSKDLHSDSSDNNFLLNKFPDDKTAER--AEPSLSE 206
Query: 201 EDHLEKANRSNFAQGLLFSTIMDD 224
+D E+A RS F +GL+ STI +D
Sbjct: 207 KDQKERAQRSKFVRGLVLSTIFED 230
>sp|Q39083|DI191_ARATH Protein DEHYDRATION-INDUCED 19 OS=Arabidopsis thaliana GN=DI19-1
PE=1 SV=2
Length = 206
Score = 137 bits (346), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 128/214 (59%), Gaps = 16/214 (7%)
Query: 14 SRNYQSTLKSQFADFCIDFEDIE-EDDYEEVKGEYEYPCPFCSEDFDLVGLCCHIDEEHP 72
S+ + +TL+S+ ++ + FE+I+ +DD++E E+ CPFC+E +D++GLCCHID+EH
Sbjct: 5 SKRFLATLRSR-SEMLMGFEEIDGDDDFQE-----EFACPFCAESYDIIGLCCHIDDEHT 58
Query: 73 VEAKSGVCPVCVTRVTMDMVDHITTQHGNISNSWHKLKLHKGNSNSTISSLRKELQNAHF 132
+E+K+ VCPVC +V +D+V HIT HG++ K K K +NST+S LRKEL+
Sbjct: 59 LESKNAVCPVCSLKVGVDIVAHITLHHGSLFKLQRKRKSRKSGTNSTLSLLRKELREGDL 118
Query: 133 QSLLARSSSSVS-SSKKTSDPWL-SFIYNMPTADESESIQPALSTGEGAEDKSSCEKTFE 190
Q LL +S + S +S T DP L SFI PT +S PA + + E+ +
Sbjct: 119 QRLLGFTSRNGSVASSVTPDPLLSSFIS--PTRSQS---SPAPRQTKNVSEDKQIERKRQ 173
Query: 191 TNAQQSSLSNEDHLEKANRSNFAQGLLFSTIMDD 224
S +S +D E+ ++S F Q LL S I D+
Sbjct: 174 VFI--SPVSLKDREERRHKSEFVQRLLSSAIFDE 205
>sp|Q8GWK1|DI192_ARATH Protein DEHYDRATION-INDUCED 19 homolog 2 OS=Arabidopsis thaliana
GN=DI19-2 PE=1 SV=1
Length = 221
Score = 122 bits (305), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 107/197 (54%), Gaps = 15/197 (7%)
Query: 32 FEDIEEDDYEEVKGE--YEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTM 89
++D+EE +EEV + EYPCPFC+ D+DLV LC HIDEEH EA +G+CPVC RV M
Sbjct: 30 YQDLEE--FEEVDDDIAVEYPCPFCASDYDLVELCHHIDEEHRHEANNGICPVCSKRVKM 87
Query: 90 DMVDHITTQHGNISNSWHKLKLHKGNSNSTISSLRKELQNAHFQSLLARSSSSVSSSKKT 149
MVDHIT+ H ++ S K ++ + L + H L + SK
Sbjct: 88 HMVDHITSHHRDVLKSEQKEMSYRED-----PYLSDKYLQPHLDELPPSMNHHQHPSKHV 142
Query: 150 SDPWLSFIYNMPTADESESIQPALSTGEGAEDKSSCEKTFETNAQQSS--LSNEDHLEKA 207
SD +LSFI N ++++ + P S EDK+ + + SS LS+ D LEKA
Sbjct: 143 SDQFLSFINNSALPNQTKLVLPDSSV----EDKNPIKDSSAAKEGTSSCPLSDSDKLEKA 198
Query: 208 NRSNFAQGLLFSTIMDD 224
+ F QGLL S + DD
Sbjct: 199 KKCEFVQGLLSSAMFDD 215
>sp|Q688X9|DI191_ORYSJ Protein DEHYDRATION-INDUCED 19 OS=Oryza sativa subsp. japonica
GN=DI19-1 PE=2 SV=1
Length = 226
Score = 119 bits (297), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/240 (33%), Positives = 126/240 (52%), Gaps = 30/240 (12%)
Query: 1 MDYSRYFGLSTSSSRNYQSTLKSQFADFCIDFEDIEEDDY-EEVKGEYEYPCPFCSEDFD 59
MD + ++ R Y + L D +EE D EEV+ E+ CP+C ED D
Sbjct: 1 MDSEHWISRLAAAKRFYAAQLGHA------DRAGMEEVDMDEEVRPEFA--CPYCYEDHD 52
Query: 60 LVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVDHITTQHGNISNSWHKLKLHKGNSNST 119
+V LC H++EEHP E + CP+C ++ DM++HIT QHG + + +L+ +
Sbjct: 53 VVSLCAHLEEEHPFEPHAAPCPICSDKIAKDMLNHITVQHGYLFKNRRRLRRFVIPGSQA 112
Query: 120 ISSLRKELQNAHFQSLLA----RSSSSVSSSKKTSDPWL-SFIYNMPTADESESIQPALS 174
+S L ++L+ AH Q LL RS++S +++ ++DP L SF + PT+D E+ +P +S
Sbjct: 113 LSLLSRDLREAHLQVLLGGGGHRSNNSSNTTNISADPLLSSFGLSFPTSDTEETSKPPIS 172
Query: 175 TGEGAEDKSSCEKTFETNAQQ------SSLSNEDHLEKAN----RSNFAQGLLFSTIMDD 224
D +S K ET AQ SSL+ E+ +K R+ F Q LL +T+ D
Sbjct: 173 I----PDDASVIK--ETPAQPWDSSIDSSLTREEREQKRKQASVRATFVQDLLLTTLFGD 226
>sp|Q5QMP3|DI193_ORYSJ Protein DEHYDRATION-INDUCED 19 homolog 3 OS=Oryza sativa subsp.
japonica GN=DI19-3 PE=2 SV=1
Length = 246
Score = 103 bits (258), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 103/184 (55%), Gaps = 11/184 (5%)
Query: 51 CPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVDHITTQHGNISNSWHKLK 110
CP+C ED D+ LC H++E+HP E + CP+C ++T DM++HIT QHG + S +++
Sbjct: 64 CPYCYEDHDIASLCAHLEEDHPYEPHTSPCPICFEKITRDMLNHITMQHGYLFKSGRRMR 123
Query: 111 LHKGNSNSTISSLRKELQNAHFQSLLA----RSSSSVSSSKKTSDPWL-SFIYNMPTAD- 164
+ +S L ++L++A Q+LL + S+ +++ ++DP L SF T D
Sbjct: 124 RFDIPESQALSLLSRDLRDAQLQALLGGGHRQRRSNTTATNISADPLLSSFGLGFSTLDS 183
Query: 165 ESESIQPALSTGEGAEDKSSCEKTFETNAQQSSLSNEDHLEK----ANRSNFAQGLLFST 220
E S P + + K + + +E+ SSL++E+ +K +R+ F QGL+ ST
Sbjct: 184 EERSKAPVPIPDDTSIHKDTPAQPWESRI-DSSLTSEEREQKRKQATDRATFVQGLVLST 242
Query: 221 IMDD 224
+ +D
Sbjct: 243 LFED 246
>sp|Q6H6E6|DI194_ORYSJ Protein DEHYDRATION-INDUCED 19 homolog 4 OS=Oryza sativa subsp.
japonica GN=DI19-4 PE=2 SV=1
Length = 245
Score = 87.8 bits (216), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 106/203 (52%), Gaps = 14/203 (6%)
Query: 32 FEDIEEDDYEEVKGEYEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDM 91
++D+E +D EV+ ++ PCP+C ED D+ LC H+++EHP E+K CPVC R++ D+
Sbjct: 47 YDDVEPED--EVRPDF--PCPYCYEDHDITSLCAHLEDEHPFESKVVACPVCSARISKDL 102
Query: 92 VDHITTQHGNI--SNSWHKLKLHKGNSNSTISSLRKELQNAHFQSLLARS--SSSVSSSK 147
+DHIT QH + H+L+ SN +S ++LQ + + LL S SS +++
Sbjct: 103 LDHITLQHSYLFRLQRHHRLRRVAVPSNHALSLGGRDLQETYLKVLLGNSSRSSGTNAAS 162
Query: 148 KTSDPWLSFIYNMPTADESESIQP--ALSTGEGAEDKSSCEKTFETNAQQSSLSN----E 201
+D LS + ++ E+E AL+ E K + + S+LS
Sbjct: 163 SVTDSLLSSLVLNLSSSEAEDTAKFSALAVVENNWFKRTLPSKTWKASSDSNLSQEERER 222
Query: 202 DHLEKANRSNFAQGLLFSTIMDD 224
A RS+F Q LL ST+ DD
Sbjct: 223 RRRRAAVRSSFVQHLLVSTLFDD 245
>sp|Q5JME8|DI195_ORYSJ Protein DEHYDRATION-INDUCED 19 homolog 5 OS=Oryza sativa subsp.
japonica GN=DI19-5 PE=2 SV=1
Length = 202
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 79/177 (44%), Gaps = 14/177 (7%)
Query: 49 YPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVDHITTQHGNISNSWHK 108
+PCPFC + ++ +C H+ EEH + ++ VCP+C + DM H QH H
Sbjct: 37 FPCPFCYIEVEVPFICNHLQEEHCFDTRNAVCPLCADNIGRDMGAHFRVQHS------HL 90
Query: 109 LKLHKGNSNSTISSLRKELQNAHFQSLLARSSSSVSSSKKTSDPWLS-FIYNMPTAD-ES 166
LK K + S+ + +F+ ++ + DP LS FI +M D S
Sbjct: 91 LKRRKPSRPSSSWPTPSNNSDPYFEGPPQYMMNNRTYQDPAPDPLLSQFICSMAQTDTNS 150
Query: 167 ESIQPALSTGEGAEDKSSCEK-TFETNAQQSSLSNEDHLEKANRSNFAQGLLFSTIM 222
++ ++ + D+ ++ T +A + L E+ R F + ++ STI+
Sbjct: 151 DNTNTEIAVSAVSHDQRLSQRVTLTDDASKLELK-----ERLQRIEFVKEIIMSTIL 202
>sp|Q7XBA5|DI196_ORYSJ Protein DEHYDRATION-INDUCED 19 homolog 6 OS=Oryza sativa subsp.
japonica GN=DI19-6 PE=2 SV=1
Length = 208
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 81/189 (42%), Gaps = 13/189 (6%)
Query: 40 YEEVKGEYEY----PCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVDHI 95
Y E+ G+ E+ PCPFC + ++ LC H+ EEH + K+ VCP+C + D +H
Sbjct: 24 YSEIAGDDEWWEYIPCPFCYIEVEVHFLCDHLQEEHCFDMKNAVCPICADNLDKDTDEHF 83
Query: 96 TTQHGNISNSWHKLKLHKGNSNSTISSLRKELQNAHFQSLLARSSSSV---SSSKKTSDP 152
QH H LK K +S S S + ++ + + S + + DP
Sbjct: 84 RVQHS------HLLKRRKSSSFSCKPSSAAADKGSYEEDSYFEAPSHCMGRPAPDSSPDP 137
Query: 153 WLSFIYNMPTADESESIQPALSTGEGAEDKSSCEKTFETNAQQSSLSNEDHLEKANRSNF 212
LS A +S + + + EG SS ++ S E+ E+ R F
Sbjct: 138 LLSQFICCSLAPPVDSPRRSEADAEGHGSSSSDDQKRREQGVMDDASKEELEERLQRIEF 197
Query: 213 AQGLLFSTI 221
+ +L +TI
Sbjct: 198 VKQMLMTTI 206
>sp|Q6J1I8|RN114_PIG RING finger protein 114 OS=Sus scrofa GN=RNF114 PE=2 SV=1
Length = 228
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 8/65 (12%)
Query: 43 VKGEYEYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVCVTRV-------TMDMVDH 94
V Y +PCP+C E +FD GL H H + KS VCP+C + + + ++H
Sbjct: 135 VPNRYTFPCPYCPEKNFDQEGLVEHCKLVHSTDTKSVVCPICASMPWGDPNYRSANFIEH 194
Query: 95 ITTQH 99
I +H
Sbjct: 195 IQRRH 199
>sp|Q6J2U6|RN114_RAT RING finger protein 114 OS=Rattus norvegicus GN=Rnf114 PE=2 SV=1
Length = 229
Score = 41.6 bits (96), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 8/65 (12%)
Query: 43 VKGEYEYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVCVTRV-------TMDMVDH 94
V Y +PCP+C E +FD GL H H + KS VCP+C + + + ++H
Sbjct: 136 VPNRYTFPCPYCPEKNFDQEGLVEHCKLTHSTDTKSVVCPICASMPWGDPSYRSANFMEH 195
Query: 95 ITTQH 99
I +H
Sbjct: 196 IQRRH 200
>sp|Q4U5R4|RN114_BOVIN RING finger protein 114 OS=Bos taurus GN=RNF114 PE=2 SV=1
Length = 230
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 8/65 (12%)
Query: 43 VKGEYEYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVCVTRV-------TMDMVDH 94
V Y +PCP+C E +FD GL H H + KS VCP+C + + + ++H
Sbjct: 137 VPNRYTFPCPYCPEKNFDQEGLVEHCKLSHSTDTKSVVCPICASMPWGDPNYRSANFIEH 196
Query: 95 ITTQH 99
+ +H
Sbjct: 197 LQRRH 201
>sp|Q9ET26|RN114_MOUSE RING finger protein 114 OS=Mus musculus GN=Rnf114 PE=2 SV=2
Length = 229
Score = 41.2 bits (95), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 8/65 (12%)
Query: 43 VKGEYEYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVCVTRV-------TMDMVDH 94
+ Y +PCP+C E +FD GL H H + KS VCP+C + + + ++H
Sbjct: 136 IPNRYTFPCPYCPEKNFDQEGLVEHCKLTHSTDTKSVVCPICASMPWGDPSYRSANFMEH 195
Query: 95 ITTQH 99
I +H
Sbjct: 196 IQRRH 200
>sp|Q9Y508|RN114_HUMAN RING finger protein 114 OS=Homo sapiens GN=RNF114 PE=1 SV=1
Length = 228
Score = 39.3 bits (90), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 43 VKGEYEYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVCVT 85
V Y +PCP+C E +FD GL H H + KS VCP+C +
Sbjct: 135 VPNRYTFPCPYCPEKNFDQEGLVEHCKLFHSTDTKSVVCPICAS 178
>sp|Q6J212|RN114_PANTR RING finger protein 114 OS=Pan troglodytes GN=RNF114 PE=2 SV=1
Length = 228
Score = 39.3 bits (90), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 43 VKGEYEYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVCVT 85
V Y +PCP+C E +FD GL H H + KS VCP+C +
Sbjct: 135 VPNRYTFPCPYCPEKNFDQEGLVEHCKLFHSTDTKSVVCPICAS 178
>sp|A2T771|ZHX1_PANTR Zinc fingers and homeoboxes protein 1 OS=Pan troglodytes GN=ZHX1
PE=3 SV=1
Length = 873
Score = 37.0 bits (84), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 14/106 (13%)
Query: 33 EDIEEDDYEEVKGEYEYPCPFCS-EDFDLVGLCCHIDEEHP--VEAKSGVCPVCVTRVTM 89
E ++ D+ + K E Y C +C+ + DL H+D EHP V S VC C
Sbjct: 54 ESVDSDNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVEC------ 107
Query: 90 DMVDHITTQHGNISNSWHKLKLHKGNSNSTISSLRKELQNAHFQSL 135
+ +T ++ +S H LK H G N ++ +++ Q Q++
Sbjct: 108 ---NFLTKRYDALSE--HNLKYHPGEENFKLTMVKRNNQTIFEQTI 148
>sp|A1YG99|ZHX1_PANPA Zinc fingers and homeoboxes protein 1 OS=Pan paniscus GN=ZHX1 PE=3
SV=1
Length = 873
Score = 37.0 bits (84), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 14/106 (13%)
Query: 33 EDIEEDDYEEVKGEYEYPCPFCS-EDFDLVGLCCHIDEEHP--VEAKSGVCPVCVTRVTM 89
E ++ D+ + K E Y C +C+ + DL H+D EHP V S VC C
Sbjct: 54 ESVDSDNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVEC------ 107
Query: 90 DMVDHITTQHGNISNSWHKLKLHKGNSNSTISSLRKELQNAHFQSL 135
+ +T ++ +S H LK H G N ++ +++ Q Q++
Sbjct: 108 ---NFLTKRYDALSE--HNLKYHPGEENFKLTMVKRNNQTIFEQTI 148
>sp|Q9UKY1|ZHX1_HUMAN Zinc fingers and homeoboxes protein 1 OS=Homo sapiens GN=ZHX1 PE=1
SV=1
Length = 873
Score = 37.0 bits (84), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 14/106 (13%)
Query: 33 EDIEEDDYEEVKGEYEYPCPFCS-EDFDLVGLCCHIDEEHP--VEAKSGVCPVCVTRVTM 89
E ++ D+ + K E Y C +C+ + DL H+D EHP V S VC C
Sbjct: 54 ESVDSDNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVEC------ 107
Query: 90 DMVDHITTQHGNISNSWHKLKLHKGNSNSTISSLRKELQNAHFQSL 135
+ +T ++ +S H LK H G N ++ +++ Q Q++
Sbjct: 108 ---NFLTKRYDALSE--HNLKYHPGEENFKLTMVKRNNQTIFEQTI 148
>sp|A2T7S4|ZHX1_PONPY Zinc fingers and homeoboxes protein 1 OS=Pongo pygmaeus GN=ZHX1
PE=3 SV=1
Length = 873
Score = 37.0 bits (84), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 14/106 (13%)
Query: 33 EDIEEDDYEEVKGEYEYPCPFCS-EDFDLVGLCCHIDEEHP--VEAKSGVCPVCVTRVTM 89
E ++ D+ + K E Y C +C+ + DL H+D EHP V S VC C
Sbjct: 54 ESVDSDNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVEC------ 107
Query: 90 DMVDHITTQHGNISNSWHKLKLHKGNSNSTISSLRKELQNAHFQSL 135
+ +T ++ +S H LK H G N ++ +++ Q Q++
Sbjct: 108 ---NFLTKRYDALSE--HNLKYHPGEENFKLTMVKRNNQTIFEQTI 148
>sp|A1YF22|ZHX1_GORGO Zinc fingers and homeoboxes protein 1 OS=Gorilla gorilla gorilla
GN=ZHX1 PE=3 SV=1
Length = 873
Score = 37.0 bits (84), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 14/106 (13%)
Query: 33 EDIEEDDYEEVKGEYEYPCPFCS-EDFDLVGLCCHIDEEHP--VEAKSGVCPVCVTRVTM 89
E ++ D+ + K E Y C +C+ + DL H+D EHP V S VC C
Sbjct: 54 ESVDSDNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVEC------ 107
Query: 90 DMVDHITTQHGNISNSWHKLKLHKGNSNSTISSLRKELQNAHFQSL 135
+ +T ++ +S H LK H G N ++ +++ Q Q++
Sbjct: 108 ---NFLTKRYDALSE--HNLKYHPGEENFKLTMVKRNNQTIFEQTI 148
>sp|Q8R515|ZHX1_RAT Zinc fingers and homeoboxes protein 1 OS=Rattus norvegicus GN=Zhx1
PE=2 SV=1
Length = 873
Score = 36.6 bits (83), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 14/106 (13%)
Query: 33 EDIEEDDYEEVKGEYEYPCPFCS-EDFDLVGLCCHIDEEHP--VEAKSGVCPVCVTRVTM 89
E ++ D+ + K E Y C +C+ + DL H+D EHP V S VC C
Sbjct: 54 ESVDSDNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVEC------ 107
Query: 90 DMVDHITTQHGNISNSWHKLKLHKGNSNSTISSLRKELQNAHFQSL 135
+ +T ++ +S H LK H G N ++ +++ Q Q++
Sbjct: 108 ---NFLTKRYDALSE--HNLKYHPGEENFKLTMVKRNNQTIFEQTI 148
>sp|P70121|ZHX1_MOUSE Zinc fingers and homeoboxes protein 1 OS=Mus musculus GN=Zhx1 PE=1
SV=2
Length = 873
Score = 35.4 bits (80), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 14/104 (13%)
Query: 35 IEEDDYEEVKGEYEYPCPFCS-EDFDLVGLCCHIDEEHP--VEAKSGVCPVCVTRVTMDM 91
++ D+ + K E Y C +C+ + DL H+D EHP V S VC C
Sbjct: 56 VDSDNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVEC-------- 107
Query: 92 VDHITTQHGNISNSWHKLKLHKGNSNSTISSLRKELQNAHFQSL 135
+ +T ++ +S H LK H G N ++ +++ Q Q++
Sbjct: 108 -NFLTKRYDALSE--HNLKYHPGEENFKLTMVKRNNQTIFEQTI 148
>sp|O15090|ZN536_HUMAN Zinc finger protein 536 OS=Homo sapiens GN=ZNF536 PE=1 SV=3
Length = 1300
Score = 34.3 bits (77), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 41/112 (36%), Gaps = 18/112 (16%)
Query: 16 NYQSTLKSQFADFCIDFEDIEEDDYEEVKGEYEYPCPFCSEDFDLVGLCCHIDEEHPVEA 75
+ Q L Q DIE+D + K YPCP C + F + H E
Sbjct: 101 DLQQFLNGQNLGIMSQMSDIEDDARKNRK----YPCPLCGKRFRFNSILSLHMRTHTGE- 155
Query: 76 KSGVCPVCVTRVTMDMVDHITTQHGNISNSWHKLKLHK-GNSNSTISSLRKE 126
K CP C DH Q GN+ L+ HK GN +R+E
Sbjct: 156 KPFKCPYC---------DHRAAQKGNLKI---HLRTHKLGNLGKGRGRVREE 195
>sp|Q8K083|ZN536_MOUSE Zinc finger protein 536 OS=Mus musculus GN=Znf536 PE=2 SV=1
Length = 1302
Score = 34.3 bits (77), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 41/112 (36%), Gaps = 18/112 (16%)
Query: 16 NYQSTLKSQFADFCIDFEDIEEDDYEEVKGEYEYPCPFCSEDFDLVGLCCHIDEEHPVEA 75
+ Q L Q DIE+D + K YPCP C + F + H E
Sbjct: 101 DLQQFLNGQNLGIMSQMSDIEDDARKNRK----YPCPLCGKRFRFNSILSLHMRTHTGE- 155
Query: 76 KSGVCPVCVTRVTMDMVDHITTQHGNISNSWHKLKLHK-GNSNSTISSLRKE 126
K CP C DH Q GN+ L+ HK GN +R+E
Sbjct: 156 KPFKCPYC---------DHRAAQKGNLKI---HLRTHKLGNLGKGRGRVREE 195
>sp|F6YVB9|E2F7_XENTR Transcription factor E2F7 OS=Xenopus tropicalis GN=e2f7 PE=3 SV=1
Length = 862
Score = 33.5 bits (75), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 70 EHPVEAKSGVCPVCVTRVTMDMVDHITTQHGNISNSWHKLKLHKGNSNSTISSLRKELQN 129
E V+ + P+ V+ V+ H ++S S H KLHK + ST S+R ++
Sbjct: 763 EPAVDQTKNLSPLSVSPVSAKCASSKADSHDSLSQSIHTAKLHKSPTPSTPKSIRPLHKD 822
Query: 130 AHFQSLLARSSSSVSSSKK 148
A F++ S VSSS+K
Sbjct: 823 AFFKT---PGSLDVSSSRK 838
>sp|O76075|DFFB_HUMAN DNA fragmentation factor subunit beta OS=Homo sapiens GN=DFFB PE=1
SV=1
Length = 338
Score = 32.7 bits (73), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 20/39 (51%)
Query: 33 EDIEEDDYEEVKGEYEYPCPFCSEDFDLVGLCCHIDEEH 71
E I+E D EV EY Y F SE+ LV + CH H
Sbjct: 274 EAIKEQDGREVDWEYFYGLLFTSENLKLVHIVCHKKTTH 312
>sp|P24918|NDUS1_NEUCR NADH-ubiquinone oxidoreductase 78 kDa subunit, mitochondrial
OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987) GN=nuo-78 PE=1 SV=2
Length = 744
Score = 32.0 bits (71), Expect = 3.1, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 36/55 (65%), Gaps = 5/55 (9%)
Query: 108 KLKLHKGNSNSTISS--LRKELQNAHFQSLLARSSSSV---SSSKKTSDPWLSFI 157
K++L + N +T ++ L+K ++N +F ++RSS ++ S++KKT DP +F+
Sbjct: 673 KVQLVEQNQGATATNEPLKKVIENFYFTDAISRSSPTMARCSAAKKTGDPRTNFM 727
>sp|Q6GPB6|KCMF1_XENLA E3 ubiquitin-protein ligase KCMF1 OS=Xenopus laevis GN=kcmf1 PE=2
SV=1
Length = 381
Score = 32.0 bits (71), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 8/78 (10%)
Query: 30 IDFEDIEEDDYEEVKGEYEYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVCVT--- 85
+DF+ + V+ + CP+C + + L H+ EH + +CP+C
Sbjct: 59 VDFDLYYGGEAFSVEQPQSFTCPYCGKMGYTETSLQEHVTSEHAETSTEVICPICAALPG 118
Query: 86 ----RVTMDMVDHITTQH 99
VT D H+T +H
Sbjct: 119 GDPNHVTDDFAAHLTLEH 136
>sp|Q4I9U7|DPH3_GIBZE Diphthamide biosynthesis protein 3 OS=Gibberella zeae (strain PH-1
/ ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=DPH3 PE=3
SV=1
Length = 108
Score = 32.0 bits (71), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 9/72 (12%)
Query: 34 DIEEDDYEEVKGEYEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVC--VTRVTMDM 91
+IE+ ++E G Y++PCP C + F + E+ E VCP C + RV D+
Sbjct: 14 EIEDMTFDEAMGVYQFPCP-CGDKFQITL------EDLLDEQDIAVCPSCSLMIRVIFDL 66
Query: 92 VDHITTQHGNIS 103
+ T + N+
Sbjct: 67 LISPRTIYQNLP 78
>sp|Q9P0J7|KCMF1_HUMAN E3 ubiquitin-protein ligase KCMF1 OS=Homo sapiens GN=KCMF1 PE=1
SV=2
Length = 381
Score = 32.0 bits (71), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 8/78 (10%)
Query: 30 IDFEDIEEDDYEEVKGEYEYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVCVT--- 85
+DF+ + V+ + CP+C + + L H+ EH + +CP+C
Sbjct: 59 VDFDLYYGGEAFSVEQPQSFTCPYCGKMGYTETSLQEHVTSEHAETSTEVICPICAALPG 118
Query: 86 ----RVTMDMVDHITTQH 99
VT D H+T +H
Sbjct: 119 GDPNHVTDDFAAHLTLEH 136
>sp|Q1L721|RN138_XENLA E3 ubiquitin-protein ligase RNF138 OS=Xenopus laevis GN=rnf138 PE=1
SV=1
Length = 222
Score = 32.0 bits (71), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
Query: 46 EYEYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVCVT-------RVTMDMVDHITT 97
E +Y CP CSE + + L H + H E VCP+C T + T +++ H+
Sbjct: 131 EPKYKCPLCSEHNLNQRSLLEHCNNVHYYEEVEMVCPICATLPWGDPIQTTGNVIAHLNA 190
Query: 98 QH 99
+H
Sbjct: 191 RH 192
>sp|Q7T321|KCMF1_DANRE E3 ubiquitin-protein ligase KCMF1 OS=Danio rerio GN=kcmf1 PE=2 SV=1
Length = 383
Score = 32.0 bits (71), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 8/78 (10%)
Query: 30 IDFEDIEEDDYEEVKGEYEYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVCVT--- 85
+DF+ + V+ + CP+C + + L H+ EH + +CP+C
Sbjct: 59 VDFDLYYGGEAFSVEQPQSFTCPYCGKMGYTETSLQEHVTSEHAETSTEVICPICAALPG 118
Query: 86 ----RVTMDMVDHITTQH 99
VT D H+T +H
Sbjct: 119 GDPNHVTDDFAAHLTLEH 136
>sp|Q0P6D6|CCD15_HUMAN Coiled-coil domain-containing protein 15 OS=Homo sapiens GN=CCDC15
PE=2 SV=2
Length = 951
Score = 32.0 bits (71), Expect = 3.9, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 123 LRKELQNAHFQSLLARSSSSVS-SSKKTSDPWLSFIYNMPTADESESIQPALSTGEGAED 181
L+K + A + +A SS+ +SK+TS F N+ A S + P+L G+G ED
Sbjct: 103 LQKSYERAQKEGSIAMQSSATHLTSKRTS----VFPNNLNVAIGSSRLPPSLMPGDGIED 158
Query: 182 KSSCEKTFETNAQQSS 197
+ + + F+ AQ S
Sbjct: 159 EENQNELFQQQAQALS 174
>sp|Q1LZE1|KCMF1_BOVIN E3 ubiquitin-protein ligase KCMF1 OS=Bos taurus GN=KCMF1 PE=2 SV=1
Length = 381
Score = 32.0 bits (71), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 8/78 (10%)
Query: 30 IDFEDIEEDDYEEVKGEYEYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVCVT--- 85
+DF+ + V+ + CP+C + + L H+ EH + +CP+C
Sbjct: 59 VDFDLYYGGEAFSVEQPQSFTCPYCGKMGYTETSLQEHVTSEHAETSTEVICPICAALPG 118
Query: 86 ----RVTMDMVDHITTQH 99
VT D H+T +H
Sbjct: 119 GDPNHVTDDFAAHLTLEH 136
>sp|Q80UY2|KCMF1_MOUSE E3 ubiquitin-protein ligase KCMF1 OS=Mus musculus GN=Kcmf1 PE=2
SV=1
Length = 381
Score = 32.0 bits (71), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 8/78 (10%)
Query: 30 IDFEDIEEDDYEEVKGEYEYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVCVT--- 85
+DF+ + V+ + CP+C + + L H+ EH + +CP+C
Sbjct: 59 VDFDLYYGGEAFSVEQPQSFTCPYCGKMGYTETSLQEHVTSEHAETSTEVICPICAALPG 118
Query: 86 ----RVTMDMVDHITTQH 99
VT D H+T +H
Sbjct: 119 GDPNHVTDDFAAHLTLEH 136
>sp|P17789|TTKB_DROME Protein tramtrack, beta isoform OS=Drosophila melanogaster GN=ttk
PE=1 SV=2
Length = 643
Score = 31.2 bits (69), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 25/64 (39%), Gaps = 3/64 (4%)
Query: 39 DYEEVKGEYEYPCPFCSEDFDLV-GLCCHIDEEHPVEAKSGVCPVCVTRVTM--DMVDHI 95
DY +GE+ Y C CS + + C H H K CP C T +M H+
Sbjct: 498 DYCTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHV 557
Query: 96 TTQH 99
H
Sbjct: 558 KIIH 561
>sp|Q08683|APC5_YEAST Anaphase-promoting complex subunit 5 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=APC5 PE=1 SV=1
Length = 685
Score = 30.4 bits (67), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 29/43 (67%), Gaps = 3/43 (6%)
Query: 3 YSRYFGLSTSSS-RNYQSTLKSQFADFCIDFEDIEEDDYEEVK 44
Y ++ ++SSS RNY S++ +Q D + F+ +EEDD+ +VK
Sbjct: 489 YEKFLSKTSSSSLRNYDSSIINQ--DIKVAFKALEEDDFLKVK 529
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.127 0.371
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,858,729
Number of Sequences: 539616
Number of extensions: 3211417
Number of successful extensions: 9298
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 81
Number of HSP's that attempted gapping in prelim test: 8696
Number of HSP's gapped (non-prelim): 509
length of query: 226
length of database: 191,569,459
effective HSP length: 113
effective length of query: 113
effective length of database: 130,592,851
effective search space: 14756992163
effective search space used: 14756992163
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)