Query 027247
Match_columns 226
No_of_seqs 165 out of 209
Neff 4.8
Searched_HMMs 29240
Date Mon Mar 25 11:27:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027247.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027247hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ct1_A Transcriptional repress 97.2 0.00017 5.8E-09 49.7 3.0 54 48-101 15-71 (77)
2 2drp_A Protein (tramtrack DNA- 97.2 0.00017 6E-09 48.0 2.8 54 47-100 9-65 (66)
3 3uk3_C Zinc finger protein 217 96.5 0.0011 3.9E-08 42.5 2.1 52 47-100 3-57 (57)
4 2yt9_A Zinc finger-containing 96.5 0.0021 7.2E-08 45.2 3.5 51 48-100 7-60 (95)
5 1x5w_A Zinc finger protein 64, 96.4 0.002 6.9E-08 43.4 2.8 53 47-101 8-63 (70)
6 2eod_A TNF receptor-associated 96.3 0.0026 8.7E-08 42.7 2.9 48 47-97 9-59 (66)
7 1x6h_A Transcriptional repress 96.3 0.0028 9.6E-08 43.6 3.2 54 48-101 15-73 (86)
8 1bbo_A Human enhancer-binding 96.1 0.0043 1.5E-07 39.7 3.2 50 49-100 2-54 (57)
9 2ctd_A Zinc finger protein 512 96.1 0.0032 1.1E-07 46.3 2.9 51 47-100 33-87 (96)
10 2gqj_A Zinc finger protein KIA 96.0 0.00094 3.2E-08 48.5 -0.4 54 47-101 23-80 (98)
11 2adr_A ADR1; transcription reg 95.9 0.006 2E-07 39.5 3.3 51 48-100 2-55 (60)
12 1x6e_A Zinc finger protein 24; 95.9 0.0045 1.5E-07 41.9 2.6 51 48-100 14-67 (72)
13 2cot_A Zinc finger protein 435 95.7 0.0098 3.3E-07 40.6 3.7 52 47-100 17-71 (77)
14 2wbt_A B-129; zinc finger; 2.7 95.5 0.0092 3.2E-07 44.5 3.3 51 48-102 74-127 (129)
15 2dmd_A Zinc finger protein 64, 95.5 0.0091 3.1E-07 41.9 3.1 51 48-100 8-61 (96)
16 2d9k_A FLN29 gene product; zin 95.4 0.0033 1.1E-07 44.4 0.5 47 48-97 17-64 (75)
17 2dlq_A GLI-kruppel family memb 95.3 0.012 4.2E-07 42.8 3.3 53 48-100 35-91 (124)
18 2ee8_A Protein ODD-skipped-rel 95.2 0.02 6.9E-07 40.9 4.3 52 47-100 16-70 (106)
19 2d9h_A Zinc finger protein 692 95.2 0.0063 2.1E-07 41.6 1.3 55 47-102 6-65 (78)
20 2kmk_A Zinc finger protein GFI 95.1 0.0082 2.8E-07 40.7 1.8 47 49-97 30-79 (82)
21 2dmd_A Zinc finger protein 64, 95.1 0.018 6E-07 40.4 3.5 53 47-101 35-90 (96)
22 1a1h_A QGSR zinc finger peptid 95.0 0.012 4E-07 40.8 2.5 19 49-67 35-54 (90)
23 2rpc_A Zinc finger protein ZIC 95.0 0.017 6E-07 44.1 3.5 54 47-100 24-87 (155)
24 2lce_A B-cell lymphoma 6 prote 94.9 0.013 4.6E-07 39.6 2.5 52 47-100 16-70 (74)
25 2ej4_A Zinc finger protein ZIC 94.9 0.019 6.4E-07 40.3 3.3 54 47-100 24-87 (95)
26 2lv2_A Insulinoma-associated p 94.9 0.018 6.3E-07 42.0 3.3 53 47-101 27-82 (85)
27 2dlq_A GLI-kruppel family memb 94.8 0.015 5E-07 42.4 2.7 53 47-101 65-120 (124)
28 2csh_A Zinc finger protein 297 94.8 0.011 3.8E-07 42.7 1.9 51 49-101 38-91 (110)
29 2yt9_A Zinc finger-containing 94.7 0.018 6.1E-07 40.3 2.7 55 47-101 34-91 (95)
30 2kmk_A Zinc finger protein GFI 94.6 0.013 4.6E-07 39.6 1.7 51 49-101 2-55 (82)
31 2ee8_A Protein ODD-skipped-rel 94.5 0.029 9.8E-07 40.1 3.5 53 47-101 44-99 (106)
32 1wge_A Hypothetical protein 26 94.2 0.019 6.4E-07 42.9 2.0 48 29-88 14-63 (83)
33 2jr7_A DPH3 homolog; DESR1, CS 94.1 0.018 6.1E-07 43.6 1.6 48 29-88 7-56 (89)
34 2dmi_A Teashirt homolog 3; zin 93.6 0.041 1.4E-06 40.0 2.9 52 48-99 19-76 (115)
35 2epx_A Zinc finger protein 28 93.6 0.045 1.5E-06 33.4 2.7 35 48-83 12-47 (47)
36 1wjp_A Zinc finger protein 295 93.6 0.033 1.1E-06 40.2 2.3 45 48-96 16-63 (107)
37 4gzn_C ZFP-57, zinc finger pro 93.5 0.038 1.3E-06 37.7 2.4 49 48-98 4-55 (60)
38 2eq0_A Zinc finger protein 347 93.4 0.051 1.7E-06 33.2 2.6 35 47-83 11-46 (46)
39 1llm_C Chimera of ZIF23-GCN4; 93.3 0.028 9.5E-07 39.3 1.4 52 48-101 3-57 (88)
40 2ytn_A Zinc finger protein 347 93.3 0.066 2.3E-06 32.7 3.0 34 48-83 12-46 (46)
41 1llm_C Chimera of ZIF23-GCN4; 93.2 0.006 2E-07 42.8 -2.2 52 48-102 31-85 (88)
42 2em0_A Zinc finger protein 224 93.1 0.065 2.2E-06 32.7 2.8 34 48-83 12-46 (46)
43 1yop_A KTI11P; zinc finger, me 93.1 0.032 1.1E-06 41.7 1.5 48 29-88 7-56 (83)
44 2ema_A Zinc finger protein 347 93.0 0.055 1.9E-06 33.0 2.4 34 48-83 12-46 (46)
45 2eop_A Zinc finger protein 268 93.0 0.067 2.3E-06 32.6 2.7 34 48-83 12-46 (46)
46 2gli_A Protein (five-finger GL 93.0 0.045 1.5E-06 41.5 2.3 51 48-100 67-124 (155)
47 1ubd_C Protein (YY1 zinc finge 93.0 0.078 2.7E-06 38.8 3.5 51 47-100 4-59 (124)
48 2ene_A Zinc finger protein 347 92.7 0.07 2.4E-06 32.6 2.5 34 48-83 12-46 (46)
49 1wjp_A Zinc finger protein 295 92.6 0.044 1.5E-06 39.5 1.6 50 48-100 42-94 (107)
50 2ebt_A Krueppel-like factor 5; 92.6 0.082 2.8E-06 37.0 3.1 53 47-101 14-73 (100)
51 2eps_A POZ-, at HOOK-, and zin 92.5 0.075 2.6E-06 34.0 2.6 39 47-86 11-50 (54)
52 2ep2_A Zinc finger protein 484 92.3 0.08 2.7E-06 32.3 2.4 34 48-83 12-46 (46)
53 2em5_A ZFP-95, zinc finger pro 92.3 0.087 3E-06 32.2 2.6 34 48-83 12-46 (46)
54 2em9_A Zinc finger protein 224 92.3 0.095 3.2E-06 31.8 2.7 34 48-83 12-46 (46)
55 2dlk_A Novel protein; ZF-C2H2 92.2 0.081 2.8E-06 35.6 2.6 53 47-100 6-65 (79)
56 2ytq_A Zinc finger protein 268 92.1 0.098 3.3E-06 32.0 2.6 34 48-83 12-46 (46)
57 2ghf_A ZHX1, zinc fingers and 92.1 0.074 2.5E-06 40.0 2.4 51 47-97 17-73 (102)
58 2el4_A Zinc finger protein 268 92.1 0.1 3.5E-06 31.7 2.7 34 48-83 12-46 (46)
59 2lt7_A Transcriptional regulat 92.0 0.052 1.8E-06 42.1 1.6 49 47-97 21-72 (133)
60 2eoq_A Zinc finger protein 224 92.0 0.083 2.8E-06 32.2 2.2 34 48-83 12-46 (46)
61 2emy_A Zinc finger protein 268 91.9 0.065 2.2E-06 32.7 1.6 34 48-83 12-46 (46)
62 2ytj_A Zinc finger protein 484 91.9 0.084 2.9E-06 32.2 2.1 34 48-83 12-46 (46)
63 2emf_A Zinc finger protein 484 91.8 0.12 4.3E-06 31.5 2.8 34 48-83 12-46 (46)
64 2ytk_A Zinc finger protein 347 91.8 0.067 2.3E-06 32.6 1.6 34 48-83 12-46 (46)
65 2ytr_A Zinc finger protein 347 91.7 0.11 3.9E-06 31.5 2.5 34 48-83 12-46 (46)
66 2i13_A AART; DNA binding, zinc 91.6 0.074 2.5E-06 42.0 2.1 51 48-100 105-158 (190)
67 2epz_A Zinc finger protein 28 91.6 0.13 4.4E-06 31.3 2.8 34 48-83 12-46 (46)
68 2enc_A Zinc finger protein 224 91.6 0.094 3.2E-06 31.9 2.1 34 48-83 12-46 (46)
69 2eoe_A Zinc finger protein 347 91.6 0.081 2.8E-06 32.2 1.8 34 48-83 12-46 (46)
70 2eov_A Zinc finger protein 484 91.5 0.08 2.7E-06 32.2 1.7 34 48-83 12-46 (46)
71 2eme_A Zinc finger protein 473 91.5 0.12 4E-06 31.4 2.5 34 48-83 12-46 (46)
72 2epw_A Zinc finger protein 268 91.5 0.083 2.8E-06 32.1 1.7 34 48-83 12-46 (46)
73 1f2i_G Fusion of N-terminal 17 91.5 0.08 2.7E-06 35.3 1.8 49 47-97 18-71 (73)
74 1a1h_A QGSR zinc finger peptid 91.3 0.083 2.8E-06 36.3 1.8 53 47-101 3-60 (90)
75 2emk_A Zinc finger protein 28 91.2 0.094 3.2E-06 32.1 1.8 34 48-83 12-46 (46)
76 2ytg_A ZFP-95, zinc finger pro 91.2 0.14 4.8E-06 31.1 2.6 34 48-83 12-46 (46)
77 2em7_A Zinc finger protein 224 91.1 0.15 5.2E-06 31.0 2.7 34 48-83 12-46 (46)
78 2emh_A Zinc finger protein 484 91.1 0.072 2.5E-06 32.5 1.2 34 48-83 12-46 (46)
79 2eq4_A Zinc finger protein 224 91.0 0.1 3.6E-06 31.6 1.9 34 48-83 12-46 (46)
80 1tf6_A Protein (transcription 91.0 0.16 5.5E-06 40.0 3.4 49 49-97 73-128 (190)
81 2dmi_A Teashirt homolog 3; zin 90.9 0.076 2.6E-06 38.5 1.4 53 47-101 49-106 (115)
82 2epr_A POZ-, at HOOK-, and zin 90.9 0.12 4.1E-06 32.0 2.1 36 47-84 11-47 (48)
83 2csh_A Zinc finger protein 297 90.9 0.13 4.4E-06 37.0 2.5 52 47-101 9-63 (110)
84 2gli_A Protein (five-finger GL 90.8 0.15 5.1E-06 38.6 3.0 53 48-100 3-64 (155)
85 2en8_A Zinc finger protein 224 90.8 0.16 5.5E-06 30.8 2.6 34 48-83 12-46 (46)
86 2ep0_A Zinc finger protein 28 90.7 0.16 5.4E-06 30.9 2.5 34 48-83 12-46 (46)
87 2ely_A Zinc finger protein 224 90.7 0.091 3.1E-06 32.1 1.4 34 48-83 12-46 (46)
88 2j7j_A Transcription factor II 90.7 0.11 3.7E-06 35.1 1.9 50 49-100 2-58 (85)
89 2elz_A Zinc finger protein 224 90.6 0.18 6.3E-06 30.7 2.8 34 48-83 12-46 (46)
90 2ysp_A Zinc finger protein 224 90.6 0.11 3.8E-06 31.6 1.7 34 48-83 12-46 (46)
91 2en6_A Zinc finger protein 268 90.6 0.074 2.5E-06 32.4 0.9 35 47-83 11-46 (46)
92 1ubd_C Protein (YY1 zinc finge 90.6 0.19 6.6E-06 36.6 3.3 53 47-101 33-90 (124)
93 2eml_A Zinc finger protein 28 90.5 0.17 5.7E-06 30.8 2.5 34 48-83 12-46 (46)
94 2en1_A Zinc finger protein 224 90.5 0.12 4.3E-06 31.4 1.9 34 48-83 12-46 (46)
95 2eoo_A ZFP-95, zinc finger pro 90.3 0.093 3.2E-06 32.1 1.2 34 48-83 12-46 (46)
96 2ytm_A Zinc finger protein 28 90.3 0.081 2.8E-06 32.4 0.9 34 48-83 12-46 (46)
97 2ep3_A Zinc finger protein 484 90.2 0.18 6.2E-06 30.6 2.5 34 48-83 12-46 (46)
98 2el6_A Zinc finger protein 268 89.9 0.19 6.7E-06 30.6 2.5 34 48-83 12-46 (46)
99 2i13_A AART; DNA binding, zinc 89.9 0.13 4.3E-06 40.6 2.0 51 48-100 21-74 (190)
100 2emm_A ZFP-95, zinc finger pro 89.6 0.15 5.1E-06 30.9 1.7 34 48-83 12-46 (46)
101 2ytd_A Zinc finger protein 473 89.6 0.14 4.8E-06 31.1 1.6 34 48-83 12-46 (46)
102 2ytt_A Zinc finger protein 473 89.5 0.094 3.2E-06 32.1 0.7 34 48-83 12-46 (46)
103 2emx_A Zinc finger protein 268 89.3 0.15 5.2E-06 30.7 1.6 34 48-83 10-44 (44)
104 2yu8_A Zinc finger protein 347 89.2 0.11 3.9E-06 31.6 0.9 34 48-83 12-46 (46)
105 2epq_A POZ-, at HOOK-, and zin 88.8 0.13 4.6E-06 31.2 1.1 35 48-84 10-45 (45)
106 2j7j_A Transcription factor II 88.8 0.18 6.1E-06 34.0 1.8 48 47-99 30-85 (85)
107 2emp_A Zinc finger protein 347 88.6 0.16 5.5E-06 30.9 1.3 34 48-83 12-46 (46)
108 2em2_A Zinc finger protein 28 88.5 0.19 6.6E-06 30.6 1.7 34 48-83 12-46 (46)
109 2wbs_A Krueppel-like factor 4; 88.4 0.23 8E-06 33.9 2.2 52 47-100 4-62 (89)
110 1vd4_A Transcription initiatio 88.2 0.23 7.7E-06 32.8 1.9 36 48-87 14-49 (62)
111 2em8_A Zinc finger protein 224 88.1 0.16 5.5E-06 30.9 1.1 34 48-83 12-46 (46)
112 2ctu_A Zinc finger protein 483 87.8 0.055 1.9E-06 35.6 -1.3 45 47-99 17-63 (73)
113 2yso_A ZFP-95, zinc finger pro 87.8 0.25 8.6E-06 29.9 1.9 34 48-83 12-46 (46)
114 2lt7_A Transcriptional regulat 87.4 0.2 7E-06 38.7 1.5 52 48-101 50-104 (133)
115 2wbs_A Krueppel-like factor 4; 87.2 0.45 1.5E-05 32.4 3.1 49 47-97 34-87 (89)
116 2rpc_A Zinc finger protein ZIC 86.8 0.56 1.9E-05 35.5 3.7 51 49-101 63-118 (155)
117 1tf6_A Protein (transcription 86.3 0.58 2E-05 36.7 3.7 51 48-100 104-161 (190)
118 2ysl_A Tripartite motif-contai 86.2 0.16 5.5E-06 34.6 0.3 43 47-89 19-69 (73)
119 2l6l_A DNAJ homolog subfamily 85.9 0.17 5.9E-06 40.3 0.4 50 32-94 99-150 (155)
120 1t1h_A Gspef-atpub14, armadill 85.5 0.23 8E-06 34.4 0.8 42 47-88 7-54 (78)
121 2jp9_A Wilms tumor 1; DNA bind 85.0 0.37 1.3E-05 34.5 1.8 47 49-97 37-88 (119)
122 2lv2_A Insulinoma-associated p 83.9 0.48 1.6E-05 34.3 2.0 29 48-76 56-85 (85)
123 6rxn_A Rubredoxin; electron tr 83.7 0.48 1.6E-05 31.5 1.7 34 47-85 3-38 (46)
124 1wii_A Hypothetical UPF0222 pr 83.7 0.3 1E-05 36.4 0.8 35 47-86 22-56 (85)
125 1paa_A Yeast transcription fac 83.6 0.56 1.9E-05 25.2 1.8 26 48-73 2-28 (30)
126 2ebt_A Krueppel-like factor 5; 83.1 0.71 2.4E-05 32.0 2.6 51 47-99 44-99 (100)
127 2ep1_A Zinc finger protein 484 83.0 0.8 2.7E-05 27.5 2.5 33 48-82 12-45 (46)
128 2jp9_A Wilms tumor 1; DNA bind 82.3 0.62 2.1E-05 33.3 2.1 52 47-100 5-63 (119)
129 2epa_A Krueppel-like factor 10 81.7 0.87 3E-05 30.0 2.5 48 47-96 16-70 (72)
130 2em3_A Zinc finger protein 28 81.6 0.63 2.2E-05 28.1 1.6 33 48-82 12-45 (46)
131 3mjh_B Early endosome antigen 81.5 0.58 2E-05 29.3 1.4 28 47-74 4-32 (34)
132 2emg_A Zinc finger protein 484 81.5 1.1 3.8E-05 26.9 2.8 33 48-82 12-45 (46)
133 2eon_A ZFP-95, zinc finger pro 81.3 1.2 4E-05 26.9 2.8 33 48-82 12-45 (46)
134 2eq2_A Zinc finger protein 347 81.2 1.1 3.8E-05 26.9 2.7 33 48-82 12-45 (46)
135 2emi_A Zinc finger protein 484 80.9 1 3.5E-05 27.0 2.4 33 48-82 12-45 (46)
136 2yts_A Zinc finger protein 484 80.8 1.2 4.2E-05 26.6 2.8 33 48-82 12-45 (46)
137 1twf_L ABC10-alpha, DNA-direct 80.6 0.63 2.2E-05 33.4 1.5 29 47-87 27-55 (70)
138 3ztg_A E3 ubiquitin-protein li 80.4 0.13 4.4E-06 36.9 -2.2 41 47-87 12-60 (92)
139 2ytp_A Zinc finger protein 484 80.0 1.2 4.1E-05 26.8 2.5 33 48-82 12-45 (46)
140 2enf_A Zinc finger protein 347 80.0 1.2 4.3E-05 26.7 2.6 33 48-82 12-45 (46)
141 2yth_A Zinc finger protein 224 79.9 1.3 4.6E-05 26.6 2.7 33 48-82 12-45 (46)
142 2ect_A Ring finger protein 126 79.5 0.83 2.8E-05 31.5 1.8 42 47-88 14-63 (78)
143 2yti_A Zinc finger protein 347 79.1 1.2 4.1E-05 26.7 2.3 33 48-82 12-45 (46)
144 2k5c_A Uncharacterized protein 78.9 0.59 2E-05 35.2 0.9 14 47-60 50-63 (95)
145 2egp_A Tripartite motif-contai 78.9 0.78 2.7E-05 31.5 1.5 43 47-89 11-65 (79)
146 2eq1_A Zinc finger protein 347 78.7 1.4 4.9E-05 26.3 2.6 33 48-82 12-45 (46)
147 2eow_A Zinc finger protein 347 77.8 1 3.4E-05 27.0 1.6 33 48-82 12-45 (46)
148 2adr_A ADR1; transcription reg 77.7 1.4 4.7E-05 27.9 2.3 28 48-75 30-58 (60)
149 2eoy_A Zinc finger protein 473 77.7 1.4 4.7E-05 26.5 2.3 34 48-82 12-46 (46)
150 2kr4_A Ubiquitin conjugation f 77.6 1 3.5E-05 32.3 1.9 35 47-88 13-59 (85)
151 3hcs_A TNF receptor-associated 77.2 1.4 4.8E-05 35.0 2.7 47 48-97 82-131 (170)
152 2emj_A Zinc finger protein 28 77.1 1 3.4E-05 27.2 1.5 33 48-82 12-45 (46)
153 2kre_A Ubiquitin conjugation f 77.1 1.8 6.3E-05 32.2 3.2 35 47-88 28-74 (100)
154 2ytf_A Zinc finger protein 268 77.1 1.5 5.1E-05 26.2 2.3 33 48-82 12-45 (46)
155 2ecy_A TNF receptor-associated 76.5 0.52 1.8E-05 31.6 0.0 43 47-89 14-62 (66)
156 2yrj_A Zinc finger protein 473 76.3 1.7 6E-05 25.9 2.4 33 48-82 12-45 (46)
157 2el5_A Zinc finger protein 268 76.2 1.7 5.8E-05 25.4 2.3 32 48-81 10-42 (42)
158 1wgm_A Ubiquitin conjugation f 76.1 2.2 7.6E-05 31.6 3.4 41 47-88 21-68 (98)
159 1bor_A Transcription factor PM 75.1 1.6 5.4E-05 28.7 2.1 42 47-88 5-48 (56)
160 3pwf_A Rubrerythrin; non heme 75.1 1.6 5.4E-05 35.9 2.6 25 47-85 137-161 (170)
161 2ysj_A Tripartite motif-contai 75.1 0.58 2E-05 31.0 -0.1 14 47-60 19-32 (63)
162 2elp_A Zinc finger protein 406 75.0 0.85 2.9E-05 26.0 0.7 21 48-68 9-31 (37)
163 2eor_A Zinc finger protein 224 74.9 1.1 3.7E-05 26.8 1.2 33 48-82 12-45 (46)
164 2ct1_A Transcriptional repress 74.8 1.2 4.2E-05 29.8 1.6 28 48-75 45-73 (77)
165 1iym_A EL5; ring-H2 finger, ub 74.8 0.52 1.8E-05 30.2 -0.3 40 48-87 5-53 (55)
166 1wir_A Protein arginine N-meth 74.6 1.3 4.6E-05 34.8 1.9 32 47-78 14-46 (121)
167 2en9_A Zinc finger protein 28 74.5 1.5 5.1E-05 26.4 1.8 33 48-82 12-45 (46)
168 2em6_A Zinc finger protein 224 74.4 2.2 7.6E-05 25.5 2.6 33 48-82 12-45 (46)
169 2kiz_A E3 ubiquitin-protein li 74.0 0.31 1.1E-05 32.9 -1.7 42 47-88 13-62 (69)
170 2lcq_A Putative toxin VAPC6; P 73.8 0.95 3.2E-05 36.2 0.9 28 47-87 131-158 (165)
171 2ecw_A Tripartite motif-contai 73.6 0.5 1.7E-05 32.6 -0.7 43 47-89 18-71 (85)
172 2em4_A Zinc finger protein 28 73.5 1.6 5.3E-05 26.3 1.7 33 48-82 12-45 (46)
173 2csy_A Zinc finger protein 183 73.4 0.45 1.6E-05 33.2 -1.0 42 47-88 14-60 (81)
174 2ent_A Krueppel-like factor 15 73.2 2.6 9E-05 25.2 2.7 34 48-83 12-48 (48)
175 1e4u_A Transcriptional repress 73.2 1.4 4.9E-05 31.4 1.6 43 47-89 10-62 (78)
176 2epu_A Zinc finger protein 32; 72.1 1.7 5.8E-05 26.0 1.6 33 48-82 12-45 (45)
177 2k5c_A Uncharacterized protein 71.6 1.1 3.6E-05 33.8 0.7 23 48-70 8-30 (95)
178 1klr_A Zinc finger Y-chromosom 71.6 1.4 4.8E-05 23.2 1.0 20 49-68 3-23 (30)
179 2eof_A Zinc finger protein 268 71.5 2.1 7.3E-05 25.1 2.0 24 48-72 12-36 (44)
180 1zw8_A Zinc-responsive transcr 71.4 2.9 0.0001 28.5 2.9 46 54-99 9-64 (64)
181 2ecj_A Tripartite motif-contai 71.4 1.3 4.5E-05 28.4 1.0 14 47-60 14-27 (58)
182 2dlk_A Novel protein; ZF-C2H2 71.3 1.6 5.6E-05 28.9 1.5 38 47-86 37-77 (79)
183 2eoz_A Zinc finger protein 473 71.0 1.2 4.3E-05 26.7 0.8 33 48-82 12-45 (46)
184 2m0f_A Zinc finger and BTB dom 70.9 1.8 6E-05 22.6 1.3 20 48-67 2-22 (29)
185 2en7_A Zinc finger protein 268 70.4 3 0.0001 24.5 2.4 24 48-72 12-36 (44)
186 3iuf_A Zinc finger protein UBI 70.4 1.8 6.3E-05 26.7 1.5 29 48-76 7-36 (48)
187 3mkr_B Coatomer subunit alpha; 70.4 1.2 4.2E-05 40.4 0.9 35 46-93 276-311 (320)
188 2yrm_A B-cell lymphoma 6 prote 70.2 2.2 7.4E-05 25.4 1.8 33 48-82 10-43 (43)
189 2l7x_A Envelope glycoprotein; 70.1 1.6 5.3E-05 31.9 1.2 22 75-96 28-50 (77)
190 2yuc_A TNF receptor-associated 69.9 3 0.0001 28.7 2.7 47 47-95 15-63 (76)
191 1ard_A Yeast transcription fac 69.7 2.1 7.3E-05 22.4 1.5 20 49-68 3-23 (29)
192 2elu_A Zinc finger protein 406 69.6 1.4 4.8E-05 27.7 0.8 25 49-73 10-35 (37)
193 1znf_A 31ST zinc finger from X 69.1 3 0.0001 21.5 2.0 20 49-68 2-22 (27)
194 2eom_A ZFP-95, zinc finger pro 69.1 2.3 7.8E-05 25.6 1.7 32 48-81 12-44 (46)
195 2enh_A Zinc finger protein 28 69.0 3.5 0.00012 24.6 2.6 32 48-81 12-44 (46)
196 2els_A Zinc finger protein 406 68.7 2 7E-05 24.1 1.4 22 47-68 8-30 (36)
197 1jm7_B BARD1, BRCA1-associated 68.6 1.2 4.3E-05 33.3 0.5 42 47-88 21-66 (117)
198 2yur_A Retinoblastoma-binding 68.4 0.82 2.8E-05 31.6 -0.5 40 47-86 14-61 (74)
199 1x6h_A Transcriptional repress 68.3 3.1 0.0001 27.8 2.4 37 48-86 47-84 (86)
200 3mv2_A Coatomer subunit alpha; 68.3 1.4 4.9E-05 40.1 0.9 36 45-93 284-320 (325)
201 1lko_A Rubrerythrin all-iron(I 68.1 1.8 6.2E-05 35.8 1.4 26 47-85 154-179 (191)
202 2m0e_A Zinc finger and BTB dom 67.8 1.9 6.6E-05 22.4 1.1 19 49-67 3-22 (29)
203 2eoh_A Zinc finger protein 28 67.7 3 0.0001 24.9 2.1 32 48-81 12-44 (46)
204 2ea5_A Cell growth regulator w 67.6 1.2 4.2E-05 30.8 0.3 41 47-88 14-57 (68)
205 2f42_A STIP1 homology and U-bo 67.2 2.8 9.5E-05 34.8 2.4 36 47-88 105-152 (179)
206 2kvh_A Zinc finger and BTB dom 67.1 2.2 7.7E-05 22.3 1.2 20 48-67 3-23 (27)
207 2m0d_A Zinc finger and BTB dom 67.0 2.5 8.7E-05 22.1 1.5 21 48-68 3-24 (30)
208 2d9h_A Zinc finger protein 692 67.0 2.8 9.5E-05 27.9 2.0 30 47-76 37-67 (78)
209 3fl2_A E3 ubiquitin-protein li 66.9 0.56 1.9E-05 35.5 -1.8 42 47-88 51-98 (124)
210 2ecv_A Tripartite motif-contai 65.9 1.3 4.5E-05 30.4 0.1 43 47-89 18-71 (85)
211 1p7a_A BF3, BKLF, kruppel-like 65.8 3.1 0.00011 23.4 1.8 21 48-68 11-32 (37)
212 3uk3_C Zinc finger protein 217 65.7 1.8 6.3E-05 26.9 0.8 24 48-71 32-56 (57)
213 1rik_A E6APC1 peptide; E6-bind 65.3 2.3 7.9E-05 22.3 1.1 20 49-68 3-23 (29)
214 2yto_A Zinc finger protein 484 64.9 2.7 9.2E-05 25.1 1.4 21 48-68 12-33 (46)
215 2d8t_A Dactylidin, ring finger 64.6 1.5 5.2E-05 29.8 0.2 46 47-92 14-64 (71)
216 3jyw_9 60S ribosomal protein L 64.3 1.8 6.3E-05 31.3 0.6 10 47-56 25-34 (72)
217 2l0b_A E3 ubiquitin-protein li 64.3 1.1 3.9E-05 32.2 -0.5 42 47-88 39-88 (91)
218 2djb_A Polycomb group ring fin 64.2 0.56 1.9E-05 32.1 -2.1 42 47-88 14-61 (72)
219 2eq3_A Zinc finger protein 347 64.2 3.5 0.00012 24.5 1.8 32 48-81 12-44 (46)
220 2yte_A Zinc finger protein 473 64.0 4.3 0.00015 23.5 2.2 21 48-68 10-31 (42)
221 2emb_A Zinc finger protein 473 63.9 5.3 0.00018 23.4 2.7 24 48-72 12-36 (44)
222 2ct5_A Zinc finger BED domain 63.8 1.5 5.2E-05 31.6 0.1 16 89-104 46-61 (73)
223 2i5o_A DNA polymerase ETA; zin 63.7 2.5 8.7E-05 27.0 1.2 21 47-67 8-28 (39)
224 2elm_A Zinc finger protein 406 63.6 2.4 8.2E-05 24.3 1.0 25 48-72 9-34 (37)
225 2kvf_A Zinc finger and BTB dom 63.6 3.5 0.00012 21.5 1.6 21 48-68 3-24 (28)
226 2drp_A Protein (tramtrack DNA- 63.5 2.2 7.7E-05 27.4 0.9 26 47-72 39-65 (66)
227 2elx_A Zinc finger protein 406 63.5 2.7 9.3E-05 23.2 1.2 21 48-68 7-28 (35)
228 3htk_C E3 SUMO-protein ligase 63.3 1.6 5.5E-05 38.8 0.2 42 47-88 180-231 (267)
229 3j21_i 50S ribosomal protein L 63.3 1.9 6.6E-05 32.0 0.6 11 47-57 34-44 (83)
230 2ct2_A Tripartite motif protei 62.9 0.63 2.2E-05 32.5 -2.1 43 47-89 14-68 (88)
231 4a17_Y RPL37A, 60S ribosomal p 62.9 2.3 7.7E-05 32.9 0.9 10 47-56 35-44 (103)
232 1vq8_Z 50S ribosomal protein L 62.7 2.2 7.6E-05 31.5 0.8 27 47-86 26-54 (83)
233 2elt_A Zinc finger protein 406 62.7 3 0.0001 23.2 1.2 21 48-68 9-30 (36)
234 3iz5_m 60S ribosomal protein L 62.2 2.1 7.3E-05 32.4 0.7 11 47-57 35-45 (92)
235 1v87_A Deltex protein 2; ring- 62.2 0.75 2.6E-05 34.0 -1.9 41 48-88 25-93 (114)
236 2emz_A ZFP-95, zinc finger pro 61.9 2.2 7.6E-05 25.6 0.6 32 48-81 12-44 (46)
237 1srk_A Zinc finger protein ZFP 61.9 3.8 0.00013 22.7 1.6 21 48-68 7-28 (35)
238 2lvr_A Zinc finger and BTB dom 65.9 1.7 5.7E-05 23.0 0.0 21 48-68 3-24 (30)
239 2elq_A Zinc finger protein 406 61.4 3.2 0.00011 23.2 1.2 22 47-68 8-30 (36)
240 2yuc_A TNF receptor-associated 61.3 5.5 0.00019 27.4 2.7 32 47-81 43-74 (76)
241 3izc_m 60S ribosomal protein R 61.2 2.1 7.3E-05 32.4 0.5 10 47-56 35-44 (92)
242 1ffk_W Ribosomal protein L37AE 61.0 2.4 8.3E-05 30.7 0.8 13 47-59 26-39 (73)
243 2eoj_A Zinc finger protein 268 60.7 4.3 0.00015 23.8 1.8 24 48-72 12-36 (44)
244 2xeu_A Ring finger protein 4; 60.7 0.74 2.5E-05 30.1 -1.9 43 47-89 2-56 (64)
245 2c2l_A CHIP, carboxy terminus 60.4 4.5 0.00015 33.6 2.5 42 47-88 207-254 (281)
246 1e8j_A Rubredoxin; iron-sulfur 59.5 6.5 0.00022 26.4 2.7 12 48-59 3-14 (52)
247 2ep4_A Ring finger protein 24; 59.3 1.3 4.5E-05 30.1 -0.9 42 47-88 14-63 (74)
248 2ytb_A Zinc finger protein 32; 59.3 5.8 0.0002 22.9 2.2 25 48-73 11-36 (42)
249 2elr_A Zinc finger protein 406 59.1 4.3 0.00015 22.5 1.5 22 47-68 8-30 (36)
250 2lvu_A Zinc finger and BTB dom 63.4 2 6.8E-05 22.3 0.0 19 49-67 3-22 (26)
251 1rim_A E6APC2 peptide; E6-bind 58.9 4.1 0.00014 22.7 1.4 19 49-67 3-22 (33)
252 2ckl_B Ubiquitin ligase protei 58.8 0.69 2.4E-05 36.7 -2.8 42 47-88 53-101 (165)
253 1wim_A KIAA0161 protein; ring 58.6 2 6.9E-05 30.9 -0.0 49 47-95 4-72 (94)
254 2kfq_A FP1; protein, de novo p 58.3 5.5 0.00019 21.9 1.9 24 49-73 3-27 (32)
255 3cc2_Z 50S ribosomal protein L 58.3 2.9 0.0001 32.9 0.8 29 47-87 59-88 (116)
256 2kvg_A Zinc finger and BTB dom 58.0 3.2 0.00011 21.8 0.8 20 48-67 3-23 (27)
257 2lvt_A Zinc finger and BTB dom 62.6 2.1 7.2E-05 22.6 0.0 20 49-68 3-23 (29)
258 2elv_A Zinc finger protein 406 57.7 4.2 0.00014 22.7 1.3 22 47-68 8-30 (36)
259 2yu5_A Zinc finger protein 473 57.7 4.5 0.00015 23.8 1.5 20 48-67 12-32 (44)
260 2elo_A Zinc finger protein 406 57.4 3.1 0.00011 23.4 0.7 21 48-68 9-30 (37)
261 2y43_A E3 ubiquitin-protein li 56.4 1.3 4.5E-05 32.0 -1.3 43 47-89 21-69 (99)
262 1yuz_A Nigerythrin; rubrythrin 56.3 4.3 0.00015 34.0 1.6 26 47-86 170-195 (202)
263 2kn9_A Rubredoxin; metalloprot 56.2 5.9 0.0002 29.2 2.2 39 47-85 26-68 (81)
264 3flo_B DNA polymerase alpha ca 56.1 3.1 0.0001 35.4 0.7 39 47-88 21-60 (206)
265 2e72_A POGO transposable eleme 55.9 4.8 0.00016 27.2 1.5 22 47-68 11-33 (49)
266 2ckl_A Polycomb group ring fin 55.1 1.1 3.7E-05 33.0 -2.0 43 47-89 14-62 (108)
267 2ept_A Zinc finger protein 32; 54.9 6.5 0.00022 22.6 1.9 25 48-73 10-35 (41)
268 2kdx_A HYPA, hydrogenase/ureas 54.8 4.8 0.00016 30.7 1.5 27 47-86 72-99 (119)
269 4ayc_A E3 ubiquitin-protein li 54.5 1.4 4.8E-05 34.1 -1.6 42 47-88 52-98 (138)
270 4rxn_A Rubredoxin; electron tr 54.5 6.6 0.00023 26.7 2.0 12 48-59 3-14 (54)
271 1x5w_A Zinc finger protein 64, 54.4 4.1 0.00014 26.5 1.0 26 48-73 37-63 (70)
272 1dx8_A Rubredoxin; electron tr 54.3 5.4 0.00019 28.4 1.7 39 47-85 6-48 (70)
273 3l11_A E3 ubiquitin-protein li 54.3 3.3 0.00011 30.6 0.6 43 47-89 14-62 (115)
274 2ea6_A Ring finger protein 4; 53.5 1.5 5.2E-05 29.0 -1.4 41 47-87 14-66 (69)
275 1njq_A Superman protein; zinc- 52.8 5.8 0.0002 22.7 1.4 24 48-72 6-30 (39)
276 2eou_A Zinc finger protein 473 52.7 7 0.00024 23.0 1.8 21 48-68 12-33 (44)
277 2en2_A B-cell lymphoma 6 prote 52.5 6.3 0.00022 22.8 1.5 24 48-72 11-35 (42)
278 2v3b_B Rubredoxin 2, rubredoxi 52.3 5.8 0.0002 26.9 1.5 12 48-59 3-14 (55)
279 1yk4_A Rubredoxin, RD; electro 50.8 7 0.00024 26.2 1.7 11 49-59 3-13 (52)
280 2eos_A B-cell lymphoma 6 prote 50.8 8.2 0.00028 22.3 1.9 25 48-73 11-36 (42)
281 3lrq_A E3 ubiquitin-protein li 49.9 1.5 5.1E-05 32.1 -2.0 42 47-88 21-69 (100)
282 2epv_A Zinc finger protein 268 49.5 7.8 0.00027 22.8 1.6 24 48-72 12-36 (44)
283 1x4j_A Ring finger protein 38; 49.4 2 6.8E-05 29.4 -1.3 42 47-88 22-71 (75)
284 2ghf_A ZHX1, zinc fingers and 48.3 4.9 0.00017 29.8 0.6 38 47-85 49-87 (102)
285 2qgp_A HNH endonuclease; Q39X4 47.9 4.6 0.00016 30.7 0.4 40 47-86 34-79 (112)
286 1pft_A TFIIB, PFTFIIBN; N-term 47.8 4.2 0.00014 26.4 0.2 35 47-92 4-39 (50)
287 2epc_A Zinc finger protein 32; 47.1 7.7 0.00026 22.3 1.3 24 48-72 11-35 (42)
288 2en3_A ZFP-95, zinc finger pro 46.8 6.4 0.00022 23.3 0.9 32 48-81 12-44 (46)
289 1z6u_A NP95-like ring finger p 46.7 2.4 8.3E-05 33.6 -1.4 43 47-89 77-125 (150)
290 2jvx_A NF-kappa-B essential mo 46.4 7.1 0.00024 23.3 1.0 21 47-67 2-23 (28)
291 2czr_A TBP-interacting protein 46.3 6.5 0.00022 33.6 1.1 28 43-73 151-178 (226)
292 4ic3_A E3 ubiquitin-protein li 45.4 4 0.00014 28.2 -0.2 41 47-88 23-66 (74)
293 1yui_A GAGA-factor; complex (D 45.2 8.6 0.00029 23.8 1.4 22 47-68 23-45 (54)
294 3h0g_L DNA-directed RNA polyme 45.1 9.9 0.00034 26.7 1.8 29 47-87 20-48 (63)
295 1l8d_A DNA double-strand break 44.7 6 0.0002 29.4 0.6 12 49-60 48-59 (112)
296 1rmd_A RAG1; V(D)J recombinati 43.2 5.1 0.00017 29.6 0.0 45 43-89 20-70 (116)
297 1dl6_A Transcription factor II 42.7 5.9 0.0002 27.0 0.3 36 47-93 10-46 (58)
298 4ayb_P DNA-directed RNA polyme 42.6 9 0.00031 25.7 1.2 32 47-87 2-33 (48)
299 3ng2_A RNF4, snurf, ring finge 42.6 1.4 4.9E-05 29.4 -2.9 43 47-89 9-63 (71)
300 4ap4_A E3 ubiquitin ligase RNF 41.8 10 0.00034 27.9 1.5 37 47-88 47-83 (133)
301 2gqj_A Zinc finger protein KIA 41.6 7.2 0.00025 27.4 0.6 25 48-72 54-79 (98)
302 3a43_A HYPD, hydrogenase nicke 41.4 12 0.0004 29.6 1.9 16 47-62 69-84 (139)
303 2akl_A PHNA-like protein PA012 41.4 9.2 0.00032 30.8 1.3 26 48-85 27-52 (138)
304 1wir_A Protein arginine N-meth 41.3 9.9 0.00034 29.8 1.4 31 73-103 11-43 (121)
305 2ecm_A Ring finger and CHY zin 41.2 3.9 0.00013 25.8 -0.8 41 47-87 4-53 (55)
306 2epp_A POZ-, at HOOK-, and zin 41.1 13 0.00043 25.6 1.8 35 48-85 13-48 (66)
307 3t6p_A Baculoviral IAP repeat- 41.1 6.6 0.00023 35.5 0.5 41 47-88 294-337 (345)
308 3o9x_A Uncharacterized HTH-typ 39.8 4.7 0.00016 30.3 -0.7 39 50-88 4-47 (133)
309 1jm7_A BRCA1, breast cancer ty 39.6 2.7 9.1E-05 30.6 -2.0 43 47-89 20-70 (112)
310 3sp4_A Aprataxin-like protein; 38.7 9.3 0.00032 32.5 1.0 24 47-70 168-193 (204)
311 2eox_A Zinc finger protein 473 38.7 7.3 0.00025 22.8 0.2 24 48-72 12-36 (44)
312 2yho_A E3 ubiquitin-protein li 37.7 4.9 0.00017 28.4 -0.8 42 47-89 17-61 (79)
313 2ecl_A Ring-box protein 2; RNF 37.7 4.1 0.00014 28.6 -1.2 24 64-87 48-74 (81)
314 3dpl_R Ring-box protein 1; ubi 37.2 4.1 0.00014 30.7 -1.3 37 50-86 39-98 (106)
315 3pih_A Uvrabc system protein A 37.0 14 0.00048 37.7 2.1 34 47-85 248-281 (916)
316 2jne_A Hypothetical protein YF 36.7 7 0.00024 30.0 -0.1 54 49-106 33-93 (101)
317 1sp2_A SP1F2; zinc finger, tra 35.6 21 0.00073 18.8 1.9 20 49-68 3-25 (31)
318 3hct_A TNF receptor-associated 35.0 6.8 0.00023 29.2 -0.4 43 47-89 17-65 (118)
319 4a0k_B E3 ubiquitin-protein li 34.7 8.2 0.00028 29.8 0.0 37 50-86 50-109 (117)
320 1chc_A Equine herpes virus-1 r 34.0 7.5 0.00026 25.6 -0.3 41 48-88 5-51 (68)
321 3knv_A TNF receptor-associated 33.6 5.3 0.00018 31.3 -1.3 40 47-86 30-75 (141)
322 2ctd_A Zinc finger protein 512 33.6 16 0.00055 26.0 1.4 26 48-73 62-88 (96)
323 2ecg_A Baculoviral IAP repeat- 33.0 4 0.00014 28.1 -1.9 41 47-88 24-67 (75)
324 3vhs_A ATPase wrnip1; zinc fin 32.5 19 0.00065 21.4 1.3 19 77-95 6-25 (29)
325 1zfd_A SWI5; DNA binding motif 32.4 24 0.00083 18.6 1.8 21 48-68 3-26 (32)
326 2hf1_A Tetraacyldisaccharide-1 32.3 14 0.00049 26.0 0.9 28 47-85 7-34 (68)
327 1fv5_A First zinc finger of U- 32.0 13 0.00046 22.4 0.7 21 47-67 7-28 (36)
328 2jr6_A UPF0434 protein NMA0874 31.5 15 0.00051 25.9 0.9 28 47-85 7-34 (68)
329 2wbt_A B-129; zinc finger; 2.7 31.4 20 0.00067 25.9 1.6 25 48-72 100-125 (129)
330 2ecn_A Ring finger protein 141 31.1 2.9 0.0001 28.0 -2.8 42 47-88 14-59 (70)
331 2eln_A Zinc finger protein 406 31.0 20 0.00068 21.7 1.4 21 48-68 9-32 (38)
332 2fiy_A Protein FDHE homolog; F 30.2 11 0.00038 33.7 0.1 10 47-56 181-190 (309)
333 2lo3_A SAGA-associated factor 30.1 14 0.00049 24.2 0.6 26 48-74 17-42 (44)
334 2pk7_A Uncharacterized protein 29.9 17 0.00058 25.7 1.0 28 47-85 7-34 (69)
335 1va1_A Transcription factor SP 29.8 23 0.00077 19.9 1.4 22 47-68 7-31 (37)
336 2js4_A UPF0434 protein BB2007; 29.4 16 0.00055 25.9 0.8 28 47-85 7-34 (70)
337 2r6f_A Excinuclease ABC subuni 29.2 20 0.00067 37.0 1.7 34 47-85 266-299 (972)
338 2k0a_A PRE-mRNA-splicing facto 29.1 12 0.00042 28.9 0.2 39 49-88 30-68 (109)
339 2gmg_A Hypothetical protein PF 29.1 30 0.001 26.6 2.4 27 47-85 66-92 (105)
340 1e7l_A GP49, recombination end 28.9 8.5 0.00029 31.6 -0.8 42 47-88 19-66 (157)
341 2jz8_A Uncharacterized protein 28.9 16 0.00054 27.3 0.7 15 48-62 48-62 (87)
342 1g25_A CDK-activating kinase a 28.9 3 0.0001 27.7 -3.1 42 48-89 3-55 (65)
343 3al0_B Aspartyl/glutamyl-tRNA( 27.9 22 0.00075 33.9 1.7 17 72-88 31-47 (482)
344 2jny_A Uncharacterized BCR; st 27.9 26 0.00088 24.7 1.7 30 43-85 7-36 (67)
345 3h0l_B Aspartyl/glutamyl-tRNA( 26.5 24 0.00083 33.6 1.7 18 71-88 31-48 (478)
346 1x3c_A Zinc finger protein 292 26.3 27 0.00093 25.2 1.5 28 48-75 27-57 (73)
347 2jvm_A Uncharacterized protein 26.2 21 0.00073 26.2 1.0 16 47-62 52-67 (80)
348 1bhi_A CRE-BP1, ATF-2; CRE bin 25.7 30 0.001 19.1 1.4 21 48-68 6-29 (38)
349 3ip4_B Aspartyl/glutamyl-tRNA( 24.8 27 0.00092 33.3 1.7 17 72-88 30-46 (483)
350 2ab3_A ZNF29; zinc finger prot 24.7 24 0.00084 17.8 0.8 20 49-68 3-25 (29)
351 2jsp_A Transcriptional regulat 24.6 39 0.0013 25.1 2.2 31 73-104 17-47 (87)
352 2a25_A Ubiquitin ligase SIAH1; 24.5 24 0.00081 29.0 1.1 50 48-101 6-65 (193)
353 2jrr_A Uncharacterized protein 24.5 22 0.00074 25.3 0.7 13 47-59 39-51 (67)
354 3bhp_A UPF0291 protein YNZC; N 23.8 59 0.002 22.6 2.8 21 196-216 20-41 (60)
355 2djr_A Zinc finger BED domain- 23.8 19 0.00067 25.9 0.4 16 89-104 49-64 (76)
356 2ygr_A Uvrabc system protein A 23.6 33 0.0011 35.4 2.1 34 47-85 274-308 (993)
357 1p91_A Ribosomal RNA large sub 23.1 18 0.00062 29.5 0.1 12 49-60 3-14 (269)
358 4dvc_A Thiol:disulfide interch 22.7 8.4 0.00029 29.4 -1.9 18 47-64 29-47 (184)
359 2gag_D Heterotetrameric sarcos 21.9 21 0.00071 27.2 0.2 15 48-63 3-17 (99)
360 3mwm_A ZUR, putative metal upt 21.8 26 0.00087 27.0 0.7 40 47-86 86-136 (139)
361 3kfu_F Aspartyl/glutamyl-tRNA( 21.7 34 0.0012 32.6 1.7 17 72-88 30-46 (466)
362 2jrp_A Putative cytoplasmic pr 21.1 21 0.0007 26.3 0.0 15 48-62 18-32 (81)
363 3k7a_M Transcription initiatio 21.0 36 0.0012 30.2 1.6 38 47-93 20-58 (345)
364 3eyy_A Putative iron uptake re 20.3 21 0.0007 27.7 -0.1 40 47-86 89-139 (145)
No 1
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=97.24 E-value=0.00017 Score=49.72 Aligned_cols=54 Identities=26% Similarity=0.441 Sum_probs=44.6
Q ss_pred eeeCCCCCCC-ccHhhhhhcccccCCCCCccccCCccccCcc--hhhHhhhhhcccc
Q 027247 48 EYPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHGN 101 (226)
Q Consensus 48 ~f~CPfC~e~-~dv~~L~~H~~~eH~~e~~~vvCPVC~~~v~--~d~i~Hl~~qH~~ 101 (226)
.|.|++|+.. .....|..|+...|..+.+.-.|++|...-. .++..|+...|+.
T Consensus 15 ~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~ 71 (77)
T 2ct1_A 15 PYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSY 71 (77)
T ss_dssp SEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCC
T ss_pred CeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCC
Confidence 5999999994 4578899999878887767889999987543 6899999888875
No 2
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=97.21 E-value=0.00017 Score=47.98 Aligned_cols=54 Identities=28% Similarity=0.604 Sum_probs=44.1
Q ss_pred ceeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCccccCcc--hhhHhhhhhccc
Q 027247 47 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHG 100 (226)
Q Consensus 47 ~~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC~~~v~--~d~i~Hl~~qH~ 100 (226)
..|.|+.|+..| ....|..|....|....+.-.|++|...-. .++..|+...|+
T Consensus 9 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~ 65 (66)
T 2drp_A 9 HTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK 65 (66)
T ss_dssp TEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred cceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence 469999999955 577899999877866677889999987543 589999988886
No 3
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=96.50 E-value=0.0011 Score=42.51 Aligned_cols=52 Identities=19% Similarity=0.337 Sum_probs=38.0
Q ss_pred ceeeCCCCCCC-ccHhhhhhcccccCCCCCccccCCccccCcc--hhhHhhhhhccc
Q 027247 47 YEYPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHG 100 (226)
Q Consensus 47 ~~f~CPfC~e~-~dv~~L~~H~~~eH~~e~~~vvCPVC~~~v~--~d~i~Hl~~qH~ 100 (226)
..|.|++|+.. -....|..|+.. |.. .+.-.|++|...-. .++..|+...|+
T Consensus 3 ~~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~hh~ 57 (57)
T 3uk3_C 3 SSRECSYCGKFFRSNYYLNIHLRT-HTG-EKPYKCEFCEYAAAQKTSLRYHLERHHK 57 (57)
T ss_dssp --CBCTTTCCBCSCHHHHHHHHHH-HHC-CCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred CCccCCCCcchhCChHHHHHHHHH-cCC-CCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence 46999999994 567789999864 543 35578999987543 689999988774
No 4
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=96.46 E-value=0.0021 Score=45.24 Aligned_cols=51 Identities=31% Similarity=0.541 Sum_probs=29.9
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCccccCcc--hhhHhhhhhccc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHG 100 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC~~~v~--~d~i~Hl~~qH~ 100 (226)
.|.|++|+..| ....|..|+.. |.. .+.-.|++|..... .++..|+...|+
T Consensus 7 ~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 60 (95)
T 2yt9_A 7 GVACEICGKIFRDVYHLNRHKLS-HSG-EKPYSCPVCGLRFKRKDRMSYHVRSHDG 60 (95)
T ss_dssp CEECSSSCCEESSSHHHHHHHHH-SCS-SCSEECSSSCCEESCHHHHHHHHHHHCC
T ss_pred CeECCCCCCccCChHHHHHHHHh-cCC-CCCCcCCCCCCccCCHHHHHHHHHHhcC
Confidence 47777777744 45567777643 332 23456777765432 467777766555
No 5
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=96.38 E-value=0.002 Score=43.39 Aligned_cols=53 Identities=21% Similarity=0.354 Sum_probs=40.9
Q ss_pred ceeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCccccCcc--hhhHhhhhhcccc
Q 027247 47 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHGN 101 (226)
Q Consensus 47 ~~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC~~~v~--~d~i~Hl~~qH~~ 101 (226)
..|.|++|+..| ....|..|+.. |..+ +.-.|++|..... .++..|+...|+.
T Consensus 8 ~~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~ 63 (70)
T 1x5w_A 8 HPEKCSECSYSCSSKAALRIHERI-HCTD-RPFKCNYCSFDTKQPSNLSKHMKKFHGD 63 (70)
T ss_dssp CSEECSSSSCEESSHHHHHHHHGG-GCCS-CSEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred CCeECCCCCcccCCHHHHHHHHHH-cCCC-CCEeCCCCCCccCCHHHHHHHHHHHhCC
Confidence 359999999955 57789999865 6443 5579999988543 6899999887765
No 6
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.28 E-value=0.0026 Score=42.69 Aligned_cols=48 Identities=21% Similarity=0.518 Sum_probs=38.7
Q ss_pred ceeeCCCCCCCccHhhhhhcccccCCCCCccccCC-ccccCc--chhhHhhhhh
Q 027247 47 YEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCP-VCVTRV--TMDMVDHITT 97 (226)
Q Consensus 47 ~~f~CPfC~e~~dv~~L~~H~~~eH~~e~~~vvCP-VC~~~v--~~d~i~Hl~~ 97 (226)
-.|.|++|+..|....|..|... ...+...|+ +|...- ..++..|+..
T Consensus 9 ~~~~C~~C~k~f~~~~L~~H~~~---~~~~p~~C~~~C~k~f~~~~~L~~H~~~ 59 (66)
T 2eod_A 9 RTQPCTYCTKEFVFDTIQSHQYQ---CPRLPVACPNQCGVGTVAREDLPGHLKD 59 (66)
T ss_dssp CEEECSSSCCEEEHHHHHHHHHH---CSSSEEECTTCCSCCEEETTTHHHHHHT
T ss_pred CCeeccccCCccCHHHHHHHHHH---cCCcCccCCcccCcccccHHHHHHHHHh
Confidence 36999999998888889999865 556788999 998753 3588899864
No 7
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=96.26 E-value=0.0028 Score=43.64 Aligned_cols=54 Identities=24% Similarity=0.384 Sum_probs=41.8
Q ss_pred eeeCCCCCCC-ccHhhhhhcccccCCCC--CccccCCccccCcc--hhhHhhhhhcccc
Q 027247 48 EYPCPFCSED-FDLVGLCCHIDEEHPVE--AKSGVCPVCVTRVT--MDMVDHITTQHGN 101 (226)
Q Consensus 48 ~f~CPfC~e~-~dv~~L~~H~~~eH~~e--~~~vvCPVC~~~v~--~d~i~Hl~~qH~~ 101 (226)
.|.|++|+.. .....|..|+...|... .+.-.|++|..... .++..|+...|+.
T Consensus 15 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~ 73 (86)
T 1x6h_A 15 PYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGP 73 (86)
T ss_dssp CEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCC
T ss_pred CCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCC
Confidence 5999999994 45678999987777653 36689999987543 6899999877765
No 8
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=96.10 E-value=0.0043 Score=39.70 Aligned_cols=50 Identities=20% Similarity=0.352 Sum_probs=37.8
Q ss_pred eeCCCCCCCc-cHhhhhhcccccCCCCCccccCCccccCcc--hhhHhhhhhccc
Q 027247 49 YPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHG 100 (226)
Q Consensus 49 f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC~~~v~--~d~i~Hl~~qH~ 100 (226)
|.|+.|+..| ....|..|+.. |.. .+.-.|++|...-. .++..|+...|+
T Consensus 2 ~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 54 (57)
T 1bbo_A 2 YICEECGIRXKKPSMLKKHIRT-HTD-VRPYHCTYCNFSFKTKGNLTKHMKSKAH 54 (57)
T ss_dssp CBCTTTCCBCSSHHHHHHHHHH-TSS-CCCEECSSSSCEESSHHHHHHHHHSSSS
T ss_pred CcCCCCcCcCCCHHHHHHHHHh-cCC-CCCccCCCCCchhcCHHHHHHHHHHhcc
Confidence 8999999955 57789999865 543 45678999987543 589999876554
No 9
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=96.09 E-value=0.0032 Score=46.26 Aligned_cols=51 Identities=22% Similarity=0.416 Sum_probs=40.0
Q ss_pred ceeeCCCCCCCc--cHhhhhhcccccCCCCCccccCCccccCcc--hhhHhhhhhccc
Q 027247 47 YEYPCPFCSEDF--DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHG 100 (226)
Q Consensus 47 ~~f~CPfC~e~~--dv~~L~~H~~~eH~~e~~~vvCPVC~~~v~--~d~i~Hl~~qH~ 100 (226)
..|.|+.|++.| ....|..|+. .| ..+.-.|++|...-. .+|..|++..|.
T Consensus 33 ~~~~C~~C~k~F~~~~~~L~~H~~-~h--~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~ 87 (96)
T 2ctd_A 33 GSVSCPTCQAVGRKTIEGLKKHME-NC--KQEMFTCHHCGKQLRSLAGMKYHVMANHN 87 (96)
T ss_dssp SCEECTTTCSCEESSHHHHHHHHH-HH--CCCCCCCSSSCCCCSSHHHHHHHHHHHTC
T ss_pred CCcCCCCCCCCcccCHHHHHHHHH-HH--CCCCeECCCCCCeeCCHHHHHHHhHHhcC
Confidence 359999999988 7889999975 46 457789999987654 588999544554
No 10
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.99 E-value=0.00094 Score=48.54 Aligned_cols=54 Identities=24% Similarity=0.371 Sum_probs=41.6
Q ss_pred ceeeCCCCCCCc--cHhhhhhcccccCCCCCccccCCccccCcc--hhhHhhhhhcccc
Q 027247 47 YEYPCPFCSEDF--DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHGN 101 (226)
Q Consensus 47 ~~f~CPfC~e~~--dv~~L~~H~~~eH~~e~~~vvCPVC~~~v~--~d~i~Hl~~qH~~ 101 (226)
..|.|++|+..| ....|..|+.. |....+.-.|++|...-. .+|..|+...|+.
T Consensus 23 ~~~~C~~C~k~f~~~~~~L~~H~~~-h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~ 80 (98)
T 2gqj_A 23 GEAVCPTCNVVTRKTLVGLKKHMEV-CQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSA 80 (98)
T ss_dssp SCCCCTTTCCCCSSCSHHHHHHHHH-HHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCS
T ss_pred CCcCCCCCCCChhhhHHHHHHHHHH-HcCCCCCEECCCCCCccCCHHHHHHHHHHHcCC
Confidence 359999999977 57889999855 433245679999987644 5899999887765
No 11
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=95.93 E-value=0.006 Score=39.51 Aligned_cols=51 Identities=24% Similarity=0.436 Sum_probs=38.2
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCccccCcc--hhhHhhhhhccc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHG 100 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC~~~v~--~d~i~Hl~~qH~ 100 (226)
.|.|+.|+..| ....|..|+.. |.. .+.-.|++|...-. .++..|+...|.
T Consensus 2 ~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~~H~ 55 (60)
T 2adr_A 2 SFVCEVCTRAFARQEHLKRHYRS-HTN-EKPYPCGLCNRAFTRRDLLIRHAQKIHS 55 (60)
T ss_dssp CBCCTTTCCCBSCHHHHHHHHHT-TTS-SCSEECTTTCCEESSHHHHHHHHTTTSC
T ss_pred cCcCCCCccccCCHHHHHHHHHH-hCC-CCCccCCCCCCccCCHHHHHHHHHHHcC
Confidence 48999999955 57889999865 543 35678999988543 588999865554
No 12
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=95.87 E-value=0.0045 Score=41.94 Aligned_cols=51 Identities=22% Similarity=0.365 Sum_probs=38.2
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCccccCcc--hhhHhhhhhccc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHG 100 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC~~~v~--~d~i~Hl~~qH~ 100 (226)
.|.|++|+..| ....|..|+.. |.. .+.-.|++|..... .+|..|+...++
T Consensus 14 ~~~C~~C~k~f~~~~~L~~H~~~-h~~-~~~~~C~~C~~~f~~~~~L~~H~~~H~~ 67 (72)
T 1x6e_A 14 PYGCVECGKAFSRSSILVQHQRV-HTG-EKPYKCLECGKAFSQNSGLINHQRIHTS 67 (72)
T ss_dssp CEECSSSCCEESSHHHHHHHHHG-GGC-SCCEECSSSCCEESSHHHHHHHHHHHHS
T ss_pred CccCCCCCCccCCHHHHHHHHHh-cCC-CCCeECCCCCcccCCHHHHHHHHHhcCC
Confidence 59999999955 66789999864 543 45679999987543 588899876554
No 13
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=95.67 E-value=0.0098 Score=40.63 Aligned_cols=52 Identities=23% Similarity=0.438 Sum_probs=39.1
Q ss_pred ceeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCccccCcc--hhhHhhhhhccc
Q 027247 47 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHG 100 (226)
Q Consensus 47 ~~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC~~~v~--~d~i~Hl~~qH~ 100 (226)
..|.|++|+..| ....|..|+.. |.. .+.-.|++|...-. .+|..|+...++
T Consensus 17 ~~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~L~~H~~~H~~ 71 (77)
T 2cot_A 17 RRYKCDECGKSFSHSSDLSKHRRT-HTG-EKPYKCDECGKAFIQRSHLIGHHRVHTG 71 (77)
T ss_dssp CSSBCSSSCCBCSCHHHHHHHHTT-TCC-SCSEECSSSCCEESSHHHHHHHGGGSCC
T ss_pred CCEECCCCCcccCCHHHHHHHHHH-cCC-CcCeeCCCCCCccCCHHHHHHHHHHhCC
Confidence 359999999955 57789999854 543 35679999987543 589999976554
No 14
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=95.47 E-value=0.0092 Score=44.53 Aligned_cols=51 Identities=33% Similarity=0.675 Sum_probs=39.3
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCccccCcc--hhhHhhhhhccccc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHGNI 102 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC~~~v~--~d~i~Hl~~qH~~~ 102 (226)
.|.|++|+..| ....|..|+.. | .+.-.|++|...-. .++..|+...||..
T Consensus 74 ~~~C~~C~k~f~~~~~l~~H~~~-H---~~~~~C~~C~k~f~~~~~l~~H~~~h~~~~ 127 (129)
T 2wbt_A 74 QFVCPLCLMPFSSSVSLKQHIRY-T---EHTKVCPVCKKEFTSTDSALDHVCKKHNIC 127 (129)
T ss_dssp SEECTTTCCEESSHHHHHHHHHH-T---CCCCBCTTTCCBCSSHHHHHHHHHHTTCCC
T ss_pred CeECCCCCcccCCHhHHHHHHHH-C---CCCCCCCCCCcccCCHHHHHHHHHHHCCcc
Confidence 59999999955 56778899854 5 45568999987543 58999998888753
No 15
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=95.47 E-value=0.0091 Score=41.93 Aligned_cols=51 Identities=20% Similarity=0.341 Sum_probs=30.5
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCccccCcc--hhhHhhhhhccc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHG 100 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC~~~v~--~d~i~Hl~~qH~ 100 (226)
.|.|++|+..| ....|..|+.. |.. .+.-.|++|..... .++..|+...++
T Consensus 8 ~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 61 (96)
T 2dmd_A 8 PHKCEVCGKCFSRKDKLKTHMRC-HTG-VKPYKCKTCDYAAADSSSLNKHLRIHSD 61 (96)
T ss_dssp CCCBTTTTBCCCCHHHHHHHGGG-CCC-CCSEECSSSCCEESSHHHHHHHHHHSCC
T ss_pred CeECCCCCCccCCHHHHHHHHHh-cCC-CCCEeCCCCCCccCCHHHHHHHHHHhCC
Confidence 47777777744 45667777653 322 24456777766432 467777765443
No 16
>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.40 E-value=0.0033 Score=44.37 Aligned_cols=47 Identities=21% Similarity=0.365 Sum_probs=39.0
Q ss_pred eeeCCCCCCCccHhhhhhcccccCCCCCccccCCccccCcc-hhhHhhhhh
Q 027247 48 EYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT-MDMVDHITT 97 (226)
Q Consensus 48 ~f~CPfC~e~~dv~~L~~H~~~eH~~e~~~vvCPVC~~~v~-~d~i~Hl~~ 97 (226)
.|.|+||+..|....|-.|. .|+- .+.+.||.|...+. .+|..|+..
T Consensus 17 ~~~C~~C~~~~~~~~L~~H~--~~c~-~~~~~C~~C~~~~~~~~l~~H~~~ 64 (75)
T 2d9k_A 17 LAVCQHCDLELSILKLKEHE--DYCG-ARTELCGNCGRNVLVKDLKTHPEV 64 (75)
T ss_dssp CEECSSSCCEECHHHHHHHH--HHHH-HCEEECSSSCCEEETTGGGTHHHH
T ss_pred ccCCcccChHhhHHHHHHHH--hHcC-CCceEcccCCCcCcHHHHHHHHHH
Confidence 69999999999999999997 5654 56789999988654 688888865
No 17
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=95.28 E-value=0.012 Score=42.84 Aligned_cols=53 Identities=23% Similarity=0.461 Sum_probs=32.8
Q ss_pred eeeCCCCCC-CccHhhhhhcccccCC-CCCccccCCccccCcc--hhhHhhhhhccc
Q 027247 48 EYPCPFCSE-DFDLVGLCCHIDEEHP-VEAKSGVCPVCVTRVT--MDMVDHITTQHG 100 (226)
Q Consensus 48 ~f~CPfC~e-~~dv~~L~~H~~~eH~-~e~~~vvCPVC~~~v~--~d~i~Hl~~qH~ 100 (226)
.|.|++|+. -.....|..|+...|. ...+...|++|..... .++..|+...++
T Consensus 35 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 91 (124)
T 2dlq_A 35 PFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTG 91 (124)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHSS
T ss_pred CeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHHHHcCC
Confidence 477777777 4456677777765432 2344567777766433 467777765544
No 18
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=95.23 E-value=0.02 Score=40.94 Aligned_cols=52 Identities=23% Similarity=0.466 Sum_probs=36.1
Q ss_pred ceeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCccccCcc--hhhHhhhhhccc
Q 027247 47 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHG 100 (226)
Q Consensus 47 ~~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC~~~v~--~d~i~Hl~~qH~ 100 (226)
..|.|++|+..| ....|..|+.. |.. .+...|++|..... .++..|+...++
T Consensus 16 ~~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 70 (106)
T 2ee8_A 16 KEFICKFCGRHFTKSYNLLIHERT-HTD-ERPYTCDICHKAFRRQDHLRDHRYIHSK 70 (106)
T ss_dssp CCCBCSSSCCBCSSHHHHHHHHHH-HCC-SCCCBCSSSCCBCSCHHHHHHHGGGSCC
T ss_pred cCeECCCCCCccCCHHHHHHHHHH-cCC-CCCcCCCCccchhCCHHHHHHHHHHhCC
Confidence 458999999855 56778888754 332 34578999977543 578888876554
No 19
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.15 E-value=0.0063 Score=41.62 Aligned_cols=55 Identities=20% Similarity=0.332 Sum_probs=41.3
Q ss_pred ceeeCCCCCCCc-cHhhhhhcccccCCC--CCccccCCccccCcc--hhhHhhhhhccccc
Q 027247 47 YEYPCPFCSEDF-DLVGLCCHIDEEHPV--EAKSGVCPVCVTRVT--MDMVDHITTQHGNI 102 (226)
Q Consensus 47 ~~f~CPfC~e~~-dv~~L~~H~~~eH~~--e~~~vvCPVC~~~v~--~d~i~Hl~~qH~~~ 102 (226)
-.|.|++|+..| ....|..|+.. |.. ..+.-.|++|...-. .++..|+...|...
T Consensus 6 k~~~C~~C~k~f~~~~~L~~H~~~-h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~ 65 (78)
T 2d9h_A 6 SGLQCEICGFTCRQKASLNWHQRK-HAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPAL 65 (78)
T ss_dssp CCEECSSSCCEESSHHHHHHHHHH-HHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTT
T ss_pred cCeECCCCCCeeCCHHHHHHHHHH-hhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCC
Confidence 359999999955 56789999754 443 246679999987543 58999997777764
No 20
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=95.12 E-value=0.0082 Score=40.72 Aligned_cols=47 Identities=26% Similarity=0.589 Sum_probs=21.4
Q ss_pred eeCCCCCCCc-cHhhhhhcccccCCCCCccccCCccccCcc--hhhHhhhhh
Q 027247 49 YPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITT 97 (226)
Q Consensus 49 f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC~~~v~--~d~i~Hl~~ 97 (226)
|.|++|+..| ....|..|+.. |.. .+.-.|++|...-. .++..|+..
T Consensus 30 ~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~ 79 (82)
T 2kmk_A 30 YPCQYCGKRFHQKSDMKKHTFI-HTG-EKPHKCQVCGKAFSQSSNLITHSRK 79 (82)
T ss_dssp EECSSSCCEESSHHHHHHHHHH-HHT-CCCEECTTTSCEESSHHHHHHHHHH
T ss_pred eeCCcCChhhCCHHHHHHHHHH-hcC-CCCCcCCCcchhhCChHHHHHHHHh
Confidence 5555555532 34455555432 221 23345555544322 345555543
No 21
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=95.06 E-value=0.018 Score=40.41 Aligned_cols=53 Identities=21% Similarity=0.419 Sum_probs=39.7
Q ss_pred ceeeCCCCCCC-ccHhhhhhcccccCCCCCccccCCccccCcc--hhhHhhhhhcccc
Q 027247 47 YEYPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHGN 101 (226)
Q Consensus 47 ~~f~CPfC~e~-~dv~~L~~H~~~eH~~e~~~vvCPVC~~~v~--~d~i~Hl~~qH~~ 101 (226)
..|.|++|+.. .....|..|+.. |.. .+.-.|++|...-. .++..|+...|+.
T Consensus 35 ~~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~ 90 (96)
T 2dmd_A 35 KPYKCKTCDYAAADSSSLNKHLRI-HSD-ERPFKCQICPYASRNSSQLTVHLRSHTGD 90 (96)
T ss_dssp CSEECSSSCCEESSHHHHHHHHHH-SCC-CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred CCEeCCCCCCccCCHHHHHHHHHH-hCC-CCCccCCCCCCccCCHHHHHHHHHHhcCC
Confidence 35999999994 467789999865 433 35578999987543 5899999876654
No 22
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=95.04 E-value=0.012 Score=40.76 Aligned_cols=19 Identities=26% Similarity=0.574 Sum_probs=8.6
Q ss_pred eeCCCCCCC-ccHhhhhhcc
Q 027247 49 YPCPFCSED-FDLVGLCCHI 67 (226)
Q Consensus 49 f~CPfC~e~-~dv~~L~~H~ 67 (226)
|.|++|+.. -....|..|+
T Consensus 35 ~~C~~C~~~f~~~~~l~~H~ 54 (90)
T 1a1h_A 35 FQCRICMRNFSRSDHLTTHI 54 (90)
T ss_dssp EECTTTCCEESCHHHHHHHH
T ss_pred ccCCCCCcccCCHHHHHHHH
Confidence 555555552 2334444444
No 23
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=94.96 E-value=0.017 Score=44.12 Aligned_cols=54 Identities=24% Similarity=0.429 Sum_probs=41.4
Q ss_pred ceeeCCCCCCCc-cHhhhhhcccccCCCCCcc-------ccCCccccCcc--hhhHhhhhhccc
Q 027247 47 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKS-------GVCPVCVTRVT--MDMVDHITTQHG 100 (226)
Q Consensus 47 ~~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~-------vvCPVC~~~v~--~d~i~Hl~~qH~ 100 (226)
..|+|+.|+..| ....|..|+...|..+... -.|++|..... .++..|+...++
T Consensus 24 ~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 87 (155)
T 2rpc_A 24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTG 87 (155)
T ss_dssp CSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHC
T ss_pred cccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCC
Confidence 469999999955 5778999998888775432 47999987543 588999876554
No 24
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=94.93 E-value=0.013 Score=39.60 Aligned_cols=52 Identities=23% Similarity=0.450 Sum_probs=38.7
Q ss_pred ceeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCccccCcc--hhhHhhhhhccc
Q 027247 47 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHG 100 (226)
Q Consensus 47 ~~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC~~~v~--~d~i~Hl~~qH~ 100 (226)
..|.|+.|+..| ....|..|+.. |.. .+.-.|++|...-. .++..|+...++
T Consensus 16 ~~~~C~~C~k~f~~~~~l~~H~~~-H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~ 70 (74)
T 2lce_A 16 KPYKCDRCQASFRYKGNLASHKTV-HTG-EKPYRCNICGAQFNRPANLKTHTRIHSG 70 (74)
T ss_dssp CSBCCTTSSCCBSCHHHHHHHHHH-HCC-CCSEECTTTCCEESCHHHHHHHHHHHCC
T ss_pred CCeECCCCCceeCCHHHHHHHHHH-cCC-CCCEECCCCCchhCCHHHHHHHHHhcCC
Confidence 469999999966 56789999854 543 34578999987543 588999876554
No 25
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.89 E-value=0.019 Score=40.30 Aligned_cols=54 Identities=24% Similarity=0.429 Sum_probs=39.8
Q ss_pred ceeeCCCCCCCc-cHhhhhhcccccCCCCCcc-------ccCCccccCcc--hhhHhhhhhccc
Q 027247 47 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKS-------GVCPVCVTRVT--MDMVDHITTQHG 100 (226)
Q Consensus 47 ~~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~-------vvCPVC~~~v~--~d~i~Hl~~qH~ 100 (226)
..|+|+.|+..| ....|..|+...|..+... -.|++|..... .+|..|+...++
T Consensus 24 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~ 87 (95)
T 2ej4_A 24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTG 87 (95)
T ss_dssp SSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHT
T ss_pred CCCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCC
Confidence 358899999955 5778999987667665321 68999987654 588999876443
No 26
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=94.88 E-value=0.018 Score=41.97 Aligned_cols=53 Identities=23% Similarity=0.324 Sum_probs=40.4
Q ss_pred ceeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCccccCcc--hhhHhhhhhcccc
Q 027247 47 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHGN 101 (226)
Q Consensus 47 ~~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC~~~v~--~d~i~Hl~~qH~~ 101 (226)
..|.||+|+..| ....|..|+.. |.. .+.-.|++|...-. .++.+|+...|..
T Consensus 27 ~~h~C~~Cgk~F~~~~~L~~H~~~-H~~-~k~~~C~~C~k~F~~~~~L~~H~~~~H~~ 82 (85)
T 2lv2_A 27 ECHLCPVCGESFASKGAQERHLRL-LHA-AQVFPCKYCPATFYSSPGLTRHINKCHPS 82 (85)
T ss_dssp TTEECTTSCCEESSHHHHHHHHHT-TSC-SSSEECTTSSCEESSHHHHHHHHHTTCTT
T ss_pred CCEECCCCCCCcCcHHHHhhhhhh-ccC-CCccCCCCCCCEeCCHHHHHHhCcccCcC
Confidence 469999999965 56789999854 543 45679999988543 6899999776753
No 27
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=94.85 E-value=0.015 Score=42.39 Aligned_cols=53 Identities=21% Similarity=0.422 Sum_probs=40.2
Q ss_pred ceeeCCCCCCC-ccHhhhhhcccccCCCCCccccCCccccCcc--hhhHhhhhhcccc
Q 027247 47 YEYPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHGN 101 (226)
Q Consensus 47 ~~f~CPfC~e~-~dv~~L~~H~~~eH~~e~~~vvCPVC~~~v~--~d~i~Hl~~qH~~ 101 (226)
..|.|++|+.. -....|..|+.. |.. .+.-.|++|...-. .++..|+...|+.
T Consensus 65 ~~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~~H~~ 120 (124)
T 2dlq_A 65 QVFTCSVCQETFRRRMELRLHMVS-HTG-EMPYKCSSCSQQFMQKKDLQSHMIKLHSG 120 (124)
T ss_dssp CCEECSSSCCEESSHHHHHHHHHH-HSS-SCSEECSSSCCEESSHHHHHHHHHHTSSC
T ss_pred CCeECCCCCCccCCHHHHHHHHHH-cCC-CCCccCCCccchhCCHHHHHHHHHHHCCC
Confidence 46999999994 457789999854 433 35578999987543 5899999877764
No 28
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=94.79 E-value=0.011 Score=42.74 Aligned_cols=51 Identities=25% Similarity=0.477 Sum_probs=22.7
Q ss_pred eeCCCCCCCc-cHhhhhhcccccCCCCCccccCCccccCcc--hhhHhhhhhcccc
Q 027247 49 YPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHGN 101 (226)
Q Consensus 49 f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC~~~v~--~d~i~Hl~~qH~~ 101 (226)
|.|++|+..| ....|..|+.. |.. .+.-.|++|...-. .+|..|+...|..
T Consensus 38 ~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~~~~~ 91 (110)
T 2csh_A 38 YGCGVCGKKFKMKHHLVGHMKI-HTG-IKPYECNICAKRFMWRDSFHRHVTSCTKS 91 (110)
T ss_dssp EECTTTSCEESSSHHHHHHHTT-TCC-CCCEECSSSCCEESCHHHHHHHHHHHHHH
T ss_pred ccCCCCCcccCCHHHHHHHHHH-cCC-CCCeeCCCCcchhcCHHHHHHHHHHcccc
Confidence 5555555522 33445555432 222 12345555544322 3555555444433
No 29
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=94.69 E-value=0.018 Score=40.31 Aligned_cols=55 Identities=22% Similarity=0.473 Sum_probs=42.0
Q ss_pred ceeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCccccCcc--hhhHhhhhhcccc
Q 027247 47 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHGN 101 (226)
Q Consensus 47 ~~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC~~~v~--~d~i~Hl~~qH~~ 101 (226)
..|.|+.|+..| ....|..|+...|....+.-.|++|...-. .++..|+...|+.
T Consensus 34 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~ 91 (95)
T 2yt9_A 34 KPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHSG 91 (95)
T ss_dssp CSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHHHHHHTSCC
T ss_pred CCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHHHHHHhcCC
Confidence 359999999944 678899999665544457789999987544 5899999766754
No 30
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=94.56 E-value=0.013 Score=39.61 Aligned_cols=51 Identities=25% Similarity=0.559 Sum_probs=38.1
Q ss_pred eeCCCCCCCc-cHhhhhhcccccCCCCCccccCCccccCcc--hhhHhhhhhcccc
Q 027247 49 YPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHGN 101 (226)
Q Consensus 49 f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC~~~v~--~d~i~Hl~~qH~~ 101 (226)
|.|+.|+..| ....|..|+.. |. ..+...|++|..... .++..|+...++.
T Consensus 2 ~~C~~C~~~f~~~~~l~~H~~~-h~-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~ 55 (82)
T 2kmk_A 2 FDCKICGKSFKRSSTLSTHLLI-HS-DTRPYPCQYCGKRFHQKSDMKKHTFIHTGE 55 (82)
T ss_dssp EECSSSCCEESSHHHHHHHHHH-HH-TCCCEECSSSCCEESSHHHHHHHHHHHHTC
T ss_pred ccCCCCcccccCchhHHHHHHH-cC-CCCCeeCCcCChhhCCHHHHHHHHHHhcCC
Confidence 8999999954 67789999865 43 245678999987543 5889998765543
No 31
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=94.53 E-value=0.029 Score=40.12 Aligned_cols=53 Identities=23% Similarity=0.301 Sum_probs=39.3
Q ss_pred ceeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCccccCcc--hhhHhhhhhcccc
Q 027247 47 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHGN 101 (226)
Q Consensus 47 ~~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC~~~v~--~d~i~Hl~~qH~~ 101 (226)
..|.|++|+..| ....|..|+.. |.. .+.-.|++|...-. .++..|+...++.
T Consensus 44 ~~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~L~~H~~~H~~~ 99 (106)
T 2ee8_A 44 RPYTCDICHKAFRRQDHLRDHRYI-HSK-EKPFKCQECGKGFCQSRTLAVHKTLHMQT 99 (106)
T ss_dssp CCCBCSSSCCBCSCHHHHHHHGGG-SCC-CCTTSCSSSCCCCSSHHHHHHHHHHTTSC
T ss_pred CCcCCCCccchhCCHHHHHHHHHH-hCC-CCCeECCCcCCcccCHHHHHHHHHHhCCC
Confidence 359999999955 67889999754 443 34578999987543 5899998766553
No 32
>1wge_A Hypothetical protein 2610018L09RIK; diphthamide,CSL zinc finger, ADP-ribosylating toxin, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.41.17.1
Probab=94.23 E-value=0.019 Score=42.93 Aligned_cols=48 Identities=27% Similarity=0.600 Sum_probs=32.5
Q ss_pred cCCccCCCcchhhhccCcceeeCCCCCC--CccHhhhhhcccccCCCCCccccCCccccCcc
Q 027247 29 CIDFEDIEEDDYEEVKGEYEYPCPFCSE--DFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT 88 (226)
Q Consensus 29 ~~~~e~~~~d~d~e~~~~~~f~CPfC~e--~~dv~~L~~H~~~eH~~e~~~vvCPVC~~~v~ 88 (226)
.+.+||++-|++++.+ .|+|| ||. .+....|... .-.+.||-|+-.+.
T Consensus 14 ev~LeDm~~de~~~~y---~y~Cr-CGd~F~it~edL~~g--------e~iv~C~sCSL~I~ 63 (83)
T 1wge_A 14 EVEIEDFQYDEDSETY---FYPCP-CGDNFAITKEDLENG--------EDVATCPSCSLIIK 63 (83)
T ss_dssp EEEGGGSCCBTTTTEE---EECCS-SSSCEEEEHHHHHTT--------CCEEECTTTCCEEE
T ss_pred EEEHHHceEccCCCEE---EEeCC-CCCEEEECHHHHhCC--------CEEEECCCCceEEE
Confidence 4557777776553343 89999 999 5556666422 13688999988664
No 33
>2jr7_A DPH3 homolog; DESR1, CSL zinc finger, metal binding protein; NMR {Homo sapiens}
Probab=94.06 E-value=0.018 Score=43.62 Aligned_cols=48 Identities=27% Similarity=0.605 Sum_probs=32.7
Q ss_pred cCCccCCCcchhhhccCcceeeCCCCCC--CccHhhhhhcccccCCCCCccccCCccccCcc
Q 027247 29 CIDFEDIEEDDYEEVKGEYEYPCPFCSE--DFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT 88 (226)
Q Consensus 29 ~~~~e~~~~d~d~e~~~~~~f~CPfC~e--~~dv~~L~~H~~~eH~~e~~~vvCPVC~~~v~ 88 (226)
.+.+||++-|++++.+ .|+|| ||. .+....|... .-.+.||-|+-.+.
T Consensus 7 eV~LeDm~~de~~~~y---~ypCr-CGd~F~IteedLe~g--------e~iv~C~sCSL~Ik 56 (89)
T 2jr7_A 7 EVEIEDFQYDEDSETY---FYPCP-CGDNFSITKEDLENG--------EDVATCPSCSLIIK 56 (89)
T ss_dssp EEETTTSEEETTTTEE---EEECT-TSSEEEEEHHHHHHT--------CCEEECTTTCCEEE
T ss_pred EEEHHHcEEcCCCCEE---EEcCC-CCCEEEECHHHHhCC--------CEEEECCCCccEEE
Confidence 3456777766553343 89999 999 6666677532 13688999988764
No 34
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.65 E-value=0.041 Score=39.96 Aligned_cols=52 Identities=19% Similarity=0.343 Sum_probs=32.0
Q ss_pred eeeCCCCCCCc-cHhhhhhccccc-CCCCCccccCCccccCc----chhhHhhhhhcc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEE-HPVEAKSGVCPVCVTRV----TMDMVDHITTQH 99 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~e-H~~e~~~vvCPVC~~~v----~~d~i~Hl~~qH 99 (226)
.|.|+.|+..| ....|..|+... |..+.....|++|...- ..++..|+...+
T Consensus 19 ~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~ 76 (115)
T 2dmi_A 19 KFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKED 76 (115)
T ss_dssp SEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCC
T ss_pred CEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccC
Confidence 48888888844 567788887641 33333344588887543 246777765533
No 35
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.62 E-value=0.045 Score=33.42 Aligned_cols=35 Identities=26% Similarity=0.292 Sum_probs=26.7
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCcc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC 83 (226)
.|.|++|+..| ....|..|+...|..+ +.-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~~H~~~-k~~~C~~C 47 (47)
T 2epx_A 12 PYECIECGKAFIQNTSLIRHWRYYHTGE-KPSGPSSG 47 (47)
T ss_dssp SBCCSSSCCCBSSHHHHHHHHTTTTTTS-CSSSCCCC
T ss_pred CEECCccCchhCChHHHHHHhHhhcCCC-CCCCCCCC
Confidence 59999999955 4677888986467544 56789988
No 36
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=93.60 E-value=0.033 Score=40.17 Aligned_cols=45 Identities=24% Similarity=0.502 Sum_probs=33.3
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCccccCcc--hhhHhhhh
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHIT 96 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC~~~v~--~d~i~Hl~ 96 (226)
.|.|++|+..| ....|..|+.. | .+.-.|++|..... .++..|++
T Consensus 16 ~~~C~~C~~~f~~~~~l~~H~~~-H---~~~~~C~~C~~~f~~~~~l~~H~~ 63 (107)
T 1wjp_A 16 VYQCRLCNAKLSSLLEQGSHERL-C---RNAAVCPYCSLRFFSPELKQEHES 63 (107)
T ss_dssp CCBCTTTCCBCSSHHHHHHHHHH-H---HHSBCCTTTCCCBSSHHHHHHHHH
T ss_pred CeECCCCCCccCCHHHHHHHHHH-C---CCCccCCCCCCccCCHHHHHHHHH
Confidence 58999999954 56778888755 5 35678999977543 57888884
No 37
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=93.52 E-value=0.038 Score=37.69 Aligned_cols=49 Identities=24% Similarity=0.576 Sum_probs=37.8
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCccccCcc--hhhHhhhhhc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQ 98 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC~~~v~--~d~i~Hl~~q 98 (226)
-|.|+.|+..| ....|..|. ..|.. .+.-.|++|...-. .+|..|+.+.
T Consensus 4 py~C~~C~k~F~~~~~L~~H~-~~Ht~-ekp~~C~~C~k~F~~~~~L~~H~~~H 55 (60)
T 4gzn_C 4 PFFCNFCGKTYRDASGLSRHR-RAHLG-YRPRSCPECGKCFRDQSEVNRHLKVH 55 (60)
T ss_dssp CEECTTTCCEESSHHHHHHHH-HHHHT-CCCEECTTTCCEESSHHHHHHHGGGG
T ss_pred CccCCCCCCEeCCHHHHHHHH-HHhCC-CcCeECCCCCCCcCCHHHHHHHhCcc
Confidence 49999999966 567899997 45754 45679999988543 6899998753
No 38
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.42 E-value=0.051 Score=33.22 Aligned_cols=35 Identities=26% Similarity=0.227 Sum_probs=26.3
Q ss_pred ceeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCcc
Q 027247 47 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (226)
Q Consensus 47 ~~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC 83 (226)
..|.|++|+..| ....|..|+. .|..+ +.-.|++|
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H~~-~H~~~-k~~~C~~c 46 (46)
T 2eq0_A 11 KPYKCHECGKVFRRNSHLARHQL-IHTGE-KPSGPSSG 46 (46)
T ss_dssp CCEECTTTCCEESSHHHHHHHHT-TTCCC-CCSCCSCC
T ss_pred CCeECCCCCchhCCHHHHHHHHH-HcCCC-CCCCCCCC
Confidence 359999999954 5677888974 46554 56789998
No 39
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=93.33 E-value=0.028 Score=39.27 Aligned_cols=52 Identities=25% Similarity=0.439 Sum_probs=39.1
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCccccCcc--hhhHhhhhhcccc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHGN 101 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC~~~v~--~d~i~Hl~~qH~~ 101 (226)
.|.|+.|+..| ....|..|+.. |.. .+.-.|++|...-. .++..|+...|+.
T Consensus 3 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C~k~f~~~~~L~~H~~~h~~~ 57 (88)
T 1llm_C 3 PFQCRICMRNFSRSDHLTTHIRT-HTG-EKPFACDICGRKFARSDERKRHRDIQHIL 57 (88)
T ss_dssp CEECTTTCCEESCHHHHHHHHHH-HHC-CCCEECTTTCCEESSHHHHHHHHHHHTHH
T ss_pred CCcCCCCCCccCCHHHHHHHHHH-cCC-CCCccCCCCCCccCCHHHHHHHHHHhCCC
Confidence 59999999955 56788899864 543 34578999987543 6899999888864
No 40
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.28 E-value=0.066 Score=32.68 Aligned_cols=34 Identities=26% Similarity=0.303 Sum_probs=25.8
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCcc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC 83 (226)
.|.|++|+..| ....|..|.. .|..+ +.-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~~~-k~~~C~~C 46 (46)
T 2ytn_A 12 PYKCNECGKVFTQNSHLARHRG-IHTGE-KPSGPSSG 46 (46)
T ss_dssp SCBCTTTCCBCSSHHHHHHHGG-GTSCC-CCCSCCCC
T ss_pred CeECCCCCCeeCCHHHHHHHhh-hcCCC-CCCCCCCC
Confidence 59999999954 5677888964 56544 66789998
No 41
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=93.24 E-value=0.006 Score=42.79 Aligned_cols=52 Identities=12% Similarity=0.184 Sum_probs=41.4
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCccccCcc--hhhHhhhhhccccc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHGNI 102 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC~~~v~--~d~i~Hl~~qH~~~ 102 (226)
.|.|++|+..| ....|..|+...|. ...+|+.|..... .++..||...|+..
T Consensus 31 ~~~C~~C~k~f~~~~~L~~H~~~h~~---~~~~c~~C~~~f~~~~~L~~H~~~~h~~~ 85 (88)
T 1llm_C 31 PFACDICGRKFARSDERKRHRDIQHI---LPILEDKVEELLSKNYHLENEVARLKKLV 85 (88)
T ss_dssp CEECTTTCCEESSHHHHHHHHHHHTH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CccCCCCCCccCCHHHHHHHHHHhCC---CcchHHHHHHHHHHHhhhHHHHHHHHHHh
Confidence 59999999955 67889999988773 6789999977543 57899998777654
No 42
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=93.14 E-value=0.065 Score=32.70 Aligned_cols=34 Identities=24% Similarity=0.268 Sum_probs=25.6
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCcc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC 83 (226)
.|.|++|+..| ....|..|... |..+ +.-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~~-~~~~C~~C 46 (46)
T 2em0_A 12 TWKCRECDMCFSQASSLRLHQNV-HVGE-KPSGPSSG 46 (46)
T ss_dssp CCCCSSSCCCCSSHHHHHHHGGG-GSSS-SCSCSSCC
T ss_pred CeECCCCCcccCCHHHHHHHHHH-cCCC-CCcCCCCC
Confidence 59999999954 56778889754 6543 56789988
No 43
>1yop_A KTI11P; zinc finger, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: g.41.17.1 PDB: 1yws_A
Probab=93.12 E-value=0.032 Score=41.66 Aligned_cols=48 Identities=29% Similarity=0.649 Sum_probs=32.1
Q ss_pred cCCccCCCcchhhhccCcceeeCCCCCC--CccHhhhhhcccccCCCCCccccCCccccCcc
Q 027247 29 CIDFEDIEEDDYEEVKGEYEYPCPFCSE--DFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT 88 (226)
Q Consensus 29 ~~~~e~~~~d~d~e~~~~~~f~CPfC~e--~~dv~~L~~H~~~eH~~e~~~vvCPVC~~~v~ 88 (226)
.+.+||++-|++++.+ .|+|| ||. .+....|... --.+.||-|+-.+.
T Consensus 7 ev~leDm~~de~~~~y---~ypCr-CGd~F~it~edL~~g--------e~iv~C~sCSL~I~ 56 (83)
T 1yop_A 7 EIEIEDMTFEPENQMF---TYPCP-CGDRFQIYLDDMFEG--------EKVAVCPSCSLMID 56 (83)
T ss_dssp CCBGGGSEEETTTTEE---EEEET-TTEEEEEEHHHHHTT--------CCEEECSSSCCEEE
T ss_pred EEEHHHcEEcCCCCEE---EEeCC-CCCeEEECHHHHhCC--------CEEEECCCCccEEE
Confidence 3556777766553343 89999 999 5566666421 23588999988664
No 44
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=93.04 E-value=0.055 Score=33.04 Aligned_cols=34 Identities=26% Similarity=0.307 Sum_probs=25.7
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCcc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC 83 (226)
.|.|++|+..| ....|..|... |..+ +.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~c 46 (46)
T 2ema_A 12 RYKCNECGKVFSRNSQLSQHQKI-HTGE-KPSGPSSG 46 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHTG-GGCC-CCCSSSCC
T ss_pred CcCCCCCcchhCCHHHHHHHHHh-cCCC-CCCCCCCC
Confidence 59999999955 56778889754 6543 56789998
No 45
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=92.99 E-value=0.067 Score=32.55 Aligned_cols=34 Identities=18% Similarity=0.139 Sum_probs=25.6
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCcc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC 83 (226)
.|.|++|+..| ....|..|... |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2eop_A 12 PHECRECGKSFSFNSQLIVHQRI-HTG-ENPSGPSSG 46 (46)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHTT-TTT-SCCSCCCCC
T ss_pred CeeCCCCCchhCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 59999999954 56778889754 654 356789988
No 46
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=92.97 E-value=0.045 Score=41.54 Aligned_cols=51 Identities=25% Similarity=0.489 Sum_probs=36.0
Q ss_pred eeeCCC--CCCC-ccHhhhhhcccccCCCCCccccCCc--cccCcc--hhhHhhhhhccc
Q 027247 48 EYPCPF--CSED-FDLVGLCCHIDEEHPVEAKSGVCPV--CVTRVT--MDMVDHITTQHG 100 (226)
Q Consensus 48 ~f~CPf--C~e~-~dv~~L~~H~~~eH~~e~~~vvCPV--C~~~v~--~d~i~Hl~~qH~ 100 (226)
.|.|++ |+.. .....|..|+.. |.. .+.-.|++ |...-. .++..|+...|.
T Consensus 67 ~~~C~~~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~ 124 (155)
T 2gli_A 67 PHKCTFEGCRKSYSRLENLKTHLRS-HTG-EKPYMCEHEGCSKAFSNASDRAKHQNRTHS 124 (155)
T ss_dssp CCCCCSTTCCCCCSSHHHHHHHHHH-TTT-CCCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred CccCCCCCCCCcccCHHHHHHHHHH-cCC-CCCeeCCCCCCCCccCCHHHHHHHHHHhcC
Confidence 599987 9994 456788889864 433 35578998 977543 588899855554
No 47
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=92.97 E-value=0.078 Score=38.76 Aligned_cols=51 Identities=24% Similarity=0.491 Sum_probs=37.8
Q ss_pred ceeeCC--CCCCCc-cHhhhhhcccccCCCCCccccCCccccCcc--hhhHhhhhhccc
Q 027247 47 YEYPCP--FCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHG 100 (226)
Q Consensus 47 ~~f~CP--fC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC~~~v~--~d~i~Hl~~qH~ 100 (226)
..|.|| .|+..| +...|..|+. .| ..+.-.|++|...-. .++..|+...++
T Consensus 4 ~~~~C~~~~C~~~f~~~~~l~~H~~-~h--~~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 59 (124)
T 1ubd_C 4 RTIACPHKGCTKMFRDNSAMRKHLH-TH--GPRVHVCAECGKAFVESSKLKRHQLVHTG 59 (124)
T ss_dssp -CEECCSTTCCCEESSHHHHHHHHG-GG--SCCCEECTTTCCEESSHHHHHHHGGGTSC
T ss_pred CcccCCCCCCcCccCCHHHHHHHHH-Hc--CCCCeECCCCCchhCCHHHHHHHHHHcCC
Confidence 369999 899955 6778999985 56 556778999977543 588899876554
No 48
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=92.74 E-value=0.07 Score=32.56 Aligned_cols=34 Identities=26% Similarity=0.270 Sum_probs=25.6
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCcc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC 83 (226)
.|.|++|+..| ....|..|+. .|..+ +.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-k~~~C~~C 46 (46)
T 2ene_A 12 PYKCNECGKVFRHNSYLSRHQR-IHTGE-KPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHT-TTCCC-CCCSCCCC
T ss_pred CeECCCCCchhCChHHHHHHHh-hcCCC-CCCCCCCC
Confidence 59999999955 5577888975 46543 56789988
No 49
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=92.58 E-value=0.044 Score=39.51 Aligned_cols=50 Identities=22% Similarity=0.327 Sum_probs=37.9
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCccccCcc--hhhHhhhhhccc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHG 100 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC~~~v~--~d~i~Hl~~qH~ 100 (226)
.|.|++|+..| ....|..|+ . |.. .+.-.|++|...-. .++..|+...|.
T Consensus 42 ~~~C~~C~~~f~~~~~l~~H~-~-H~~-~~~~~C~~C~~~f~~~~~L~~H~~~~H~ 94 (107)
T 1wjp_A 42 AAVCPYCSLRFFSPELKQEHE-S-KCE-YKKLTCLECMRTFKSSFSIWRHQVEVHN 94 (107)
T ss_dssp SBCCTTTCCCBSSHHHHHHHH-H-HCS-TGGGEEGGGTEECSSHHHHHHHHHHTSC
T ss_pred CccCCCCCCccCCHHHHHHHH-H-cCC-CCCccCccccchhCCHHHHHHHHHHHcC
Confidence 49999999955 567888998 3 654 45689999987543 589999975564
No 50
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=92.57 E-value=0.082 Score=37.04 Aligned_cols=53 Identities=21% Similarity=0.395 Sum_probs=36.5
Q ss_pred ceeeCCC--CCCCc-cHhhhhhcccccCCCCCccccCC--ccccCcc--hhhHhhhhhcccc
Q 027247 47 YEYPCPF--CSEDF-DLVGLCCHIDEEHPVEAKSGVCP--VCVTRVT--MDMVDHITTQHGN 101 (226)
Q Consensus 47 ~~f~CPf--C~e~~-dv~~L~~H~~~eH~~e~~~vvCP--VC~~~v~--~d~i~Hl~~qH~~ 101 (226)
..|.|++ |+..| ....|..|+.. |.. .+...|| +|..... .++..|+...++.
T Consensus 14 ~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~ 73 (100)
T 2ebt_A 14 RIHYCDYPGCTKVYTKSSHLKAHLRT-HTG-EKPYKCTWEGCDWRFARSDELTRHYRKHTGA 73 (100)
T ss_dssp CCEECCSSSCCCEESCHHHHHHHHHH-HSC-CCCEECCSSSCCCEESSHHHHHHHHHHHTSC
T ss_pred cceEcCCCCCCCcccCHHHHHHHHHH-hCC-CCCeeCCCCCCCCccCCHHHHHHHHHHhCCC
Confidence 4699998 99944 67788888864 432 3457887 5876543 5788888765543
No 51
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=92.51 E-value=0.075 Score=34.00 Aligned_cols=39 Identities=31% Similarity=0.524 Sum_probs=30.1
Q ss_pred ceeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCccccC
Q 027247 47 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTR 86 (226)
Q Consensus 47 ~~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC~~~ 86 (226)
..|.|++|+..| ....|..|+...|..+ +.-.|++|...
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~~H~~~-k~~~C~~C~k~ 50 (54)
T 2eps_A 11 KPYICQSCGKGFSRPDHLNGHIKQVHTSE-RPHKCQVWVSG 50 (54)
T ss_dssp CCEECSSSCCEESSHHHHHHHHHHTSCCC-CCCCSSSSCCS
T ss_pred CCeECCCCCcccCCHHHHHHHHHHhcCCC-CCccCCCCCCC
Confidence 359999999955 6678899986677654 55789999754
No 52
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=92.32 E-value=0.08 Score=32.28 Aligned_cols=34 Identities=26% Similarity=0.424 Sum_probs=25.6
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCcc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC 83 (226)
.|.|++|+..| ....|..|+. .|..+ +.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-k~~~C~~c 46 (46)
T 2ep2_A 12 PYECSICGKSFTKKSQLHVHQQ-IHTGE-KPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHH-TTSSC-CSCCSCCC
T ss_pred CcCCCCCCcccCCHHHHHHHHH-HhCCC-CCCCCCCC
Confidence 59999999944 5677888975 56544 56789988
No 53
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=92.31 E-value=0.087 Score=32.20 Aligned_cols=34 Identities=21% Similarity=0.138 Sum_probs=25.8
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCcc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC 83 (226)
.|.|++|+..| ....|..|+. .|.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~~~~~C~~C 46 (46)
T 2em5_A 12 SHQCHECGRGFTLKSHLNQHQR-IHTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHT-TTSC-SCCSSCCCC
T ss_pred CeECCcCCCccCCHHHHHHHHH-HhCC-CCCCCCCCC
Confidence 59999999954 5678899974 4644 356789988
No 54
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=92.26 E-value=0.095 Score=31.84 Aligned_cols=34 Identities=26% Similarity=0.275 Sum_probs=25.6
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCcc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC 83 (226)
.|.|++|+..| ....|..|.. .|..+ +.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-~~~~C~~C 46 (46)
T 2em9_A 12 PYNCKECGKSFRWASCLLKHQR-VHSGE-KPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHGG-GGTSC-CCCSTTCC
T ss_pred CeECCccccccCChHHHHHHHH-HhCCC-CCCCCCCC
Confidence 59999999955 5678888974 46543 56789988
No 55
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=92.24 E-value=0.081 Score=35.65 Aligned_cols=53 Identities=26% Similarity=0.480 Sum_probs=39.6
Q ss_pred ceeeCCC--CCCCc-cHhhhhhcccccCCCCCccccCCc--cccCcc--hhhHhhhhhccc
Q 027247 47 YEYPCPF--CSEDF-DLVGLCCHIDEEHPVEAKSGVCPV--CVTRVT--MDMVDHITTQHG 100 (226)
Q Consensus 47 ~~f~CPf--C~e~~-dv~~L~~H~~~eH~~e~~~vvCPV--C~~~v~--~d~i~Hl~~qH~ 100 (226)
..|+|++ |+..| ....|..|+...|..+ +.-.|++ |..... .++..|+...++
T Consensus 6 ~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~-~~~~C~~~~C~k~f~~~~~L~~H~~~H~~ 65 (79)
T 2dlk_A 6 SGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQ-KSFSCPEPACGKSFNFKKHLKEHMKLHSD 65 (79)
T ss_dssp SSEECSSTTTCCEESSHHHHHHHHHHGGGSC-CCEECSCTTTCCEESSHHHHHHHHHHHHT
T ss_pred CCccCCCCCCcCccCCHHHHHHHHHHHhCCC-CCeECCCCCCcCccCCHHHHHHHHHHhCC
Confidence 3588988 99955 6778999987667653 5678998 987543 588999876554
No 56
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=92.12 E-value=0.098 Score=31.97 Aligned_cols=34 Identities=24% Similarity=0.344 Sum_probs=25.5
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCcc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC 83 (226)
.|.|++|+..| ....|..|... |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2ytq_A 12 PYGCSECGKAFSSKSYLIIHMRT-HSG-EKPSGPSSG 46 (46)
T ss_dssp SCBCSSSCCBCSCHHHHHHHHTT-TCC-SCSSCCCCC
T ss_pred CcCCCccChhhCChHHHHHHHHH-hCC-CCCCCCCCC
Confidence 59999999944 56788899754 654 356789988
No 57
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=92.11 E-value=0.074 Score=39.97 Aligned_cols=51 Identities=31% Similarity=0.551 Sum_probs=38.1
Q ss_pred ceeeCCCCCCCc-cHhhhhhcccccCC--CCCccccCCccccCcc--hhhHhh-hhh
Q 027247 47 YEYPCPFCSEDF-DLVGLCCHIDEEHP--VEAKSGVCPVCVTRVT--MDMVDH-ITT 97 (226)
Q Consensus 47 ~~f~CPfC~e~~-dv~~L~~H~~~eH~--~e~~~vvCPVC~~~v~--~d~i~H-l~~ 97 (226)
..|.|++|+..| ....|..|+...|. ...+.-.|++|...-. .++..| +..
T Consensus 17 kpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~ 73 (102)
T 2ghf_A 17 GGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKY 73 (102)
T ss_dssp SSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHT
T ss_pred cCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHh
Confidence 359999999955 56789999866675 3456789999987543 588899 443
No 58
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=92.09 E-value=0.1 Score=31.69 Aligned_cols=34 Identities=24% Similarity=0.320 Sum_probs=25.4
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCcc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC 83 (226)
.|.|++|+..| ....|..|.. .|.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~C 46 (46)
T 2el4_A 12 PYGCSQCAKTFSLKSQLIVHQR-SHTG-VKPSGPSSG 46 (46)
T ss_dssp SEECSSSSCEESSHHHHHHHGG-GSSS-CCCSCCTTC
T ss_pred ceECCCCCchhCCHHHHHHHHH-HhCC-CCCCCCCCC
Confidence 59999999954 5577888974 4654 356789988
No 59
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=92.03 E-value=0.052 Score=42.09 Aligned_cols=49 Identities=24% Similarity=0.369 Sum_probs=35.0
Q ss_pred ceeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCccccCcc--hhhHhhhhh
Q 027247 47 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITT 97 (226)
Q Consensus 47 ~~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC~~~v~--~d~i~Hl~~ 97 (226)
-.|.|+.|+..| ....|..|+. .|..+ +.-.|++|...-. .++..|+..
T Consensus 21 k~y~C~~C~k~F~~~~~L~~H~~-~H~~~-k~~~C~~C~k~F~~~~~L~~H~~~ 72 (133)
T 2lt7_A 21 VYYICIVCKRSYVCLTSLRRHFN-IHSWE-KKYPCRYCEKVFPLAEYRTKHEIH 72 (133)
T ss_dssp EEEEETTTCCEESCHHHHHHHHH-HHHCC-SCEECSSSSCEESSHHHHHHHHHH
T ss_pred cCeECCCCCCCcCCHHHHHHHHH-HcCCC-CCeeCCccCeecccccchhhhccc
Confidence 359999999954 5678888975 56543 4568999977433 578888765
No 60
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.98 E-value=0.083 Score=32.21 Aligned_cols=34 Identities=24% Similarity=0.358 Sum_probs=25.3
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCcc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC 83 (226)
.|.|++|+..| ....|..|.. .|..+ +.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-k~~~C~~C 46 (46)
T 2eoq_A 12 PFKCDICGKSFCGRSRLNRHSM-VHTAE-KPSGPSSG 46 (46)
T ss_dssp SCCCSSSCCCCSSHHHHHHHHH-HTTCC-CSSSCCCC
T ss_pred CcCCCcCCchhCCHHHHHHHHH-HcCCC-CCCCCCCC
Confidence 59999999955 5677888864 46543 56789988
No 61
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.91 E-value=0.065 Score=32.71 Aligned_cols=34 Identities=24% Similarity=0.328 Sum_probs=25.2
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCcc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC 83 (226)
.|.|++|+..| ....|..|+.. |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2emy_A 12 PYECHECGKAFSRKYQLISHQRT-HAG-EKPSGPSSG 46 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHHH-HTT-SCCSCSSCC
T ss_pred CcCCCCCCcccCcHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 59999999944 56778889754 554 356789988
No 62
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.88 E-value=0.084 Score=32.17 Aligned_cols=34 Identities=24% Similarity=0.266 Sum_probs=25.4
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCcc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC 83 (226)
.|.|++|+..| ....|..|.. .|.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~c 46 (46)
T 2ytj_A 12 PYICAECGKAFTIRSNLIKHQK-IHTK-QKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHH-HTSC-CCCSSCSCC
T ss_pred CeECCCCChhhCCHHHHHHHHH-HcCC-CCCCCCCCC
Confidence 59999999954 5677888974 4654 356789988
No 63
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.77 E-value=0.12 Score=31.47 Aligned_cols=34 Identities=21% Similarity=0.304 Sum_probs=25.6
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCcc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC 83 (226)
.|.|++|+..| ....|..|+. .|.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~~-~k~~~C~~c 46 (46)
T 2emf_A 12 HFECTECGKAFTRKSTLSMHQK-IHTG-EKPSGPSSG 46 (46)
T ss_dssp CEECSSSCCEESCHHHHHHHGG-GTSC-SSCSCCCCC
T ss_pred CeECCCCCchhCCHHHHHHHHH-HhCC-CCCCCCCCC
Confidence 59999999955 5577888975 4643 456789988
No 64
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.76 E-value=0.067 Score=32.64 Aligned_cols=34 Identities=26% Similarity=0.300 Sum_probs=25.5
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCcc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC 83 (226)
.|.|++|+..| ....|..|.. .|..+ +.-.|+||
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-~~~~C~~c 46 (46)
T 2ytk_A 12 PYKCNECGKVFTQNSHLTNHWR-IHTGE-KPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHH-HHSSS-SCSSCCCC
T ss_pred CEeCCcCCCccCCHHHHHHHHH-HHCCC-CCCCCCCC
Confidence 59999999955 5677888875 45443 56789998
No 65
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.67 E-value=0.11 Score=31.48 Aligned_cols=34 Identities=26% Similarity=0.349 Sum_probs=25.3
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCcc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC 83 (226)
.|.|++|+..| ....|..|+. .|..+ +.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-~~~~C~~C 46 (46)
T 2ytr_A 12 PYKCNECGKAFSQTSKLARHQR-IHTGE-KPSGPSSG 46 (46)
T ss_dssp TTCCTTTCCCCSSHHHHHHHHT-TTTTC-SCCCSCCC
T ss_pred CcCCCCCCCccCCHHHHHHHHH-hcCCC-CCCCCCCC
Confidence 49999999955 5677888974 46543 56789988
No 66
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=91.62 E-value=0.074 Score=42.02 Aligned_cols=51 Identities=29% Similarity=0.579 Sum_probs=35.7
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCccccCcc--hhhHhhhhhccc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHG 100 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC~~~v~--~d~i~Hl~~qH~ 100 (226)
.|.|++|+..| ....|..|+...+ . .+.-.|++|...-. .++..|+...++
T Consensus 105 ~~~C~~C~~~f~~~~~l~~H~~~h~-~-~~~~~C~~C~~~f~~~~~L~~H~~~H~~ 158 (190)
T 2i13_A 105 PYACPECGKSFSQLAHLRAHQRTHT-G-EKPYKCPECGKSFSREDNLHTHQRTHTG 158 (190)
T ss_dssp CEECTTTCCEESSHHHHHHHHHHHH-C-CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred CCcCCCCCCccCCHHHHHHHHHHhC-C-CCCeECCCCCcccCCHHHHHHHHHhcCC
Confidence 58999999944 5667888875433 2 34567999977543 588888876555
No 67
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.60 E-value=0.13 Score=31.32 Aligned_cols=34 Identities=29% Similarity=0.417 Sum_probs=25.4
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCcc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC 83 (226)
.|.|++|+..| ....|..|+. .|..+ +.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-k~~~C~~C 46 (46)
T 2epz_A 12 PFDCIDCGKAFSDHIGLNQHRR-IHTGE-KPSGPSSG 46 (46)
T ss_dssp SBCCTTTCCCBSSHHHHHHHHT-TTTTC-CCCSSCCC
T ss_pred CeECCCCCceeCCHHHHHHHHH-HhCCC-CCCCCCCC
Confidence 59999999955 4577888975 46543 56789988
No 68
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=91.57 E-value=0.094 Score=31.94 Aligned_cols=34 Identities=21% Similarity=0.297 Sum_probs=25.7
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCcc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC 83 (226)
.|.|++|+..| ....|..|.. .|..+ +.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-~~~~C~~C 46 (46)
T 2enc_A 12 PFKCEECGKGFYTNSQCYSHQR-SHSGE-KPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHH-HSCCS-SCCSSCCC
T ss_pred CcCCCCCCCcCCChHHHHHHHH-HhCCC-CCCCCCCC
Confidence 59999999954 5678889974 46443 56789988
No 69
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.56 E-value=0.081 Score=32.16 Aligned_cols=34 Identities=21% Similarity=0.149 Sum_probs=25.6
Q ss_pred eeeCCCCCC-CccHhhhhhcccccCCCCCccccCCcc
Q 027247 48 EYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVC 83 (226)
Q Consensus 48 ~f~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vvCPVC 83 (226)
.|.|+.|+. =-....|..|+. .|..+ +.-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~~~-~~~~C~~C 46 (46)
T 2eoe_A 12 PYKCNECGKVFTQNSHLANHQR-IHTGV-KPSGPSSG 46 (46)
T ss_dssp SSEETTTTEECSSHHHHHHHHG-GGSCC-CSCSSCCC
T ss_pred CeECCCcChhhCCHHHHHHHHH-HcCCC-CCCCCCCC
Confidence 599999999 445677888974 56544 56789988
No 70
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.55 E-value=0.08 Score=32.20 Aligned_cols=34 Identities=24% Similarity=0.283 Sum_probs=25.5
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCcc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC 83 (226)
.|.|++|+..| ....|..|. ..|..+ +.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~-~~H~~~-~~~~C~~C 46 (46)
T 2eov_A 12 PYKCSDCGKSFTWKSRLRIHQ-KCHTGE-RHSGPSSG 46 (46)
T ss_dssp SCBCSSSCCBCSSHHHHHHHH-HHHSCC-SSCCSCCC
T ss_pred CccCCccChhhCCHHHHHHHH-HhcCCC-CCCCCCCC
Confidence 59999999955 467888896 456544 56789988
No 71
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.50 E-value=0.12 Score=31.41 Aligned_cols=34 Identities=26% Similarity=0.381 Sum_probs=25.5
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCcc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC 83 (226)
.|.|++|+..| ....|..|+. .|..+ +.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-~~~~C~~C 46 (46)
T 2eme_A 12 PYVCDYCGKAFGLSAELVRHQR-IHTGE-KPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHG-GGCCC-SCCSSCCC
T ss_pred CeECCCCChhhCCHHHHHHHHH-hcCCC-CCCCCCCC
Confidence 59999999954 5678889974 56543 45789988
No 72
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.46 E-value=0.083 Score=32.11 Aligned_cols=34 Identities=21% Similarity=0.205 Sum_probs=25.1
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCcc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC 83 (226)
.|.|++|+..| ....|..|.. .|..+ +.-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~~~-k~~~C~~C 46 (46)
T 2epw_A 12 PCKCTECGKAFCWKSQLIMHQR-THVDD-KHSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSSHHHHHHHH-HCCSC-CCSCCCCC
T ss_pred CeeCCCCCCccCCHHHHHHHHH-HhCCC-CCCCCCCC
Confidence 59999999954 4577888874 46543 56789988
No 73
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=91.45 E-value=0.08 Score=35.34 Aligned_cols=49 Identities=31% Similarity=0.591 Sum_probs=35.3
Q ss_pred ceeeCCC--CCCCc-cHhhhhhcccccCCCCCccccCCccccCcc--hhhHhhhhh
Q 027247 47 YEYPCPF--CSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITT 97 (226)
Q Consensus 47 ~~f~CPf--C~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC~~~v~--~d~i~Hl~~ 97 (226)
..|.||+ |+..| ....|..|+. .|.. .+.-.|++|...-. .++..|+..
T Consensus 18 ~~~~C~~~~C~k~f~~~~~l~~H~~-~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~ 71 (73)
T 1f2i_G 18 RPYACPVESCDRRFSRSDELTRHIR-IHTG-QKPFQCRICMRNFSRSDHLTTHIRT 71 (73)
T ss_dssp CCEECSSTTBCCEESSHHHHHHHHH-HHHC-CCCEECTTTCCEESCHHHHHHHHTT
T ss_pred CccCCcCCCCCCccCCHHHHHHHHH-hhCC-CCCeECCCCCchhCCHHHHHHHHHh
Confidence 3599996 99954 5678889975 4543 34578999987543 578888753
No 74
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=91.29 E-value=0.083 Score=36.29 Aligned_cols=53 Identities=30% Similarity=0.612 Sum_probs=38.1
Q ss_pred ceeeCCC--CCCCc-cHhhhhhcccccCCCCCccccCCccccCcc--hhhHhhhhhcccc
Q 027247 47 YEYPCPF--CSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHGN 101 (226)
Q Consensus 47 ~~f~CPf--C~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC~~~v~--~d~i~Hl~~qH~~ 101 (226)
..|.||+ |+..| ....|..|+.. |.. .+.-.|++|..... .++..|+...++.
T Consensus 3 k~~~C~~~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~ 60 (90)
T 1a1h_A 3 RPYACPVESCDRRFSQSGSLTRHIRI-HTG-QKPFQCRICMRNFSRSDHLTTHIRTHTGE 60 (90)
T ss_dssp CCEECCSSSCCCEESSHHHHHHHHHH-HHC-CCCEECTTTCCEESCHHHHHHHHHHHHCC
T ss_pred CceECCCCCCCCccCCHHHHHHHHHH-hCC-CCCccCCCCCcccCCHHHHHHHHHHcCCC
Confidence 3599995 99955 56788899864 432 35578999987543 6889998765543
No 75
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=91.24 E-value=0.094 Score=32.05 Aligned_cols=34 Identities=26% Similarity=0.350 Sum_probs=24.9
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCcc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC 83 (226)
.|.|++|+..| ....|..|+. .|..+ +.-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~~~-k~~~C~~C 46 (46)
T 2emk_A 12 PYECKECGKAFSQTTHLIQHQR-VHTGE-KPSGPSSG 46 (46)
T ss_dssp SCBCSSSCCBCSCHHHHHHHHH-HHSSC-CCSSCCCC
T ss_pred ceECCCCCchhCCHHHHHHHHH-HcCCC-CCCCCCCC
Confidence 49999999954 5567888874 46443 56789888
No 76
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.16 E-value=0.14 Score=31.13 Aligned_cols=34 Identities=24% Similarity=0.333 Sum_probs=25.3
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCcc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC 83 (226)
.|.|++|+..| ....|..|+. .|..+ +.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-k~~~C~~C 46 (46)
T 2ytg_A 12 PFKCGECGKSYNQRVHLTQHQR-VHTGE-KPSGPSSG 46 (46)
T ss_dssp SEECTTTCCEESSSHHHHTTGG-GGSSC-CSSCSCCC
T ss_pred CeECCCCCcccCCHHHHHHHHH-HcCCC-CCCCCCCC
Confidence 59999999954 4577888974 56543 56789988
No 77
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=91.07 E-value=0.15 Score=30.97 Aligned_cols=34 Identities=24% Similarity=0.260 Sum_probs=25.4
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCcc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC 83 (226)
.|.|+.|+..| ....|..|.. .|.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~C 46 (46)
T 2em7_A 12 PYKCEECGKGFICRRDLYTHHM-VHTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESCHHHHHHHGG-GGTT-CCCSSTTCC
T ss_pred CccCCCccchhCCHHHHHHHHH-HhCC-CCCCCCCCC
Confidence 59999999954 5678889974 4643 356789988
No 78
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.07 E-value=0.072 Score=32.50 Aligned_cols=34 Identities=29% Similarity=0.408 Sum_probs=25.1
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCcc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC 83 (226)
.|.|++|+..| ....|..|.. .|..+ +.-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~~~-k~~~C~~c 46 (46)
T 2emh_A 12 PYICTVCGKAFTDRSNLIKHQK-IHTGE-KPSGPSSG 46 (46)
T ss_dssp SEECTTTCCEESSHHHHHHHHH-HHHCS-SCSSSCCC
T ss_pred CcCCCCCCchhCCHHHHHHHHH-hcCCC-CCCCCCCC
Confidence 59999999954 4577888874 45443 56789988
No 79
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.05 E-value=0.1 Score=31.64 Aligned_cols=34 Identities=24% Similarity=0.241 Sum_probs=25.0
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCcc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC 83 (226)
.|.|++|+..| ....|..|.. .|.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~~~~~C~~C 46 (46)
T 2eq4_A 12 LYNCKECGKSFSRAPCLLKHER-LHSG-EKPSGPSSG 46 (46)
T ss_dssp CCCBTTTTBCCSCHHHHHHHHH-HCCS-SSCCCCCCC
T ss_pred CeECCCCCCccCchHHHHHHHH-hcCC-CCCCCCCCC
Confidence 59999999954 5577888974 4654 356789988
No 80
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=90.95 E-value=0.16 Score=40.02 Aligned_cols=49 Identities=16% Similarity=0.245 Sum_probs=23.7
Q ss_pred eeCC--CCCC-CccHhhhhhcccccCCCCCccccC--CccccCcc--hhhHhhhhh
Q 027247 49 YPCP--FCSE-DFDLVGLCCHIDEEHPVEAKSGVC--PVCVTRVT--MDMVDHITT 97 (226)
Q Consensus 49 f~CP--fC~e-~~dv~~L~~H~~~eH~~e~~~vvC--PVC~~~v~--~d~i~Hl~~ 97 (226)
|.|+ .|+. =.....|..|+...|....+.-.| ++|...-. .++..|+..
T Consensus 73 ~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~ 128 (190)
T 1tf6_A 73 FTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFS 128 (190)
T ss_dssp EECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGG
T ss_pred eeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHH
Confidence 5555 5555 334455555554555444444455 45544322 355555544
No 81
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=90.93 E-value=0.076 Score=38.52 Aligned_cols=53 Identities=11% Similarity=0.045 Sum_probs=39.0
Q ss_pred ceeeCCCCCCCc---cHhhhhhcccccCCCCCccccCCccccCcc--hhhHhhhhhcccc
Q 027247 47 YEYPCPFCSEDF---DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHGN 101 (226)
Q Consensus 47 ~~f~CPfC~e~~---dv~~L~~H~~~eH~~e~~~vvCPVC~~~v~--~d~i~Hl~~qH~~ 101 (226)
..+.|++|+..| ....|..|+.. |..+ +.-.|++|...-. .++..|+...|..
T Consensus 49 ~~~~C~~C~~~f~f~~~~~l~~H~~~-H~~~-~~~~C~~C~k~f~~~~~L~~H~~~hh~~ 106 (115)
T 2dmi_A 49 NHETDNNNPKRWSKPRKRSLLEMEGK-EDAQ-KVLKCMYCGHSFESLQDLSVHMIKTKHY 106 (115)
T ss_dssp CCCCCCCCCSCCSSCCCCCCCCCCCS-CCCC-SSCBCSSSCCBCSSHHHHHHHHHHTTTT
T ss_pred CCccCCCCCcccccccHHHHHHHhhc-cCCC-cceECCCCCCccCCHHHHHHHHHHhCCc
Confidence 456799999976 67788899754 5443 5578999987544 5899998766654
No 82
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=90.90 E-value=0.12 Score=32.03 Aligned_cols=36 Identities=22% Similarity=0.267 Sum_probs=27.5
Q ss_pred ceeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCccc
Q 027247 47 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCV 84 (226)
Q Consensus 47 ~~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC~ 84 (226)
..|.|++|+..| ....|..|+. .|.. .+.-.|++|.
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~C~ 47 (48)
T 2epr_A 11 KQVACEICGKIFRDVYHLNRHKL-SHSG-EKPYSSGPSS 47 (48)
T ss_dssp CSEEETTTTEEESSHHHHHHHGG-GSCS-CCCCCSCCCC
T ss_pred cCeeCCCCCcccCCHHHHHHHHH-hcCC-CCCccCCCCC
Confidence 369999999955 6778899974 4654 3567899996
No 83
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=90.88 E-value=0.13 Score=36.98 Aligned_cols=52 Identities=25% Similarity=0.471 Sum_probs=38.5
Q ss_pred ceeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCccccCcc--hhhHhhhhhcccc
Q 027247 47 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHGN 101 (226)
Q Consensus 47 ~~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC~~~v~--~d~i~Hl~~qH~~ 101 (226)
..|.| .|+..| ....|..|+.. |.. .+...|++|..... .++..|+...++.
T Consensus 9 k~~~C-~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~ 63 (110)
T 2csh_A 9 KLYPC-QCGKSFTHKSQRDRHMSM-HLG-LRPYGCGVCGKKFKMKHHLVGHMKIHTGI 63 (110)
T ss_dssp CCEEC-TTSCEESSHHHHHHHHHH-HSC-CCSEECTTTSCEESSSHHHHHHHTTTCCC
T ss_pred CCEec-cCCCccCCHHHHHHHHHH-cCC-CcCccCCCCCcccCCHHHHHHHHHHcCCC
Confidence 35999 999954 67789999865 433 35579999987543 6899999876553
No 84
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=90.80 E-value=0.15 Score=38.57 Aligned_cols=53 Identities=28% Similarity=0.362 Sum_probs=35.5
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCC-CCccccCCccc-----cCc--chhhHhhhhhccc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPV-EAKSGVCPVCV-----TRV--TMDMVDHITTQHG 100 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~-e~~~vvCPVC~-----~~v--~~d~i~Hl~~qH~ 100 (226)
.|+|+.|+..| +...|..|+...|.. +.+.-+|++|. ... ...+..|+...++
T Consensus 3 ~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~ 64 (155)
T 2gli_A 3 DCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTG 64 (155)
T ss_dssp BCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHC
T ss_pred cCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCC
Confidence 58999999955 578899998865532 34556777643 222 2578888876554
No 85
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=90.80 E-value=0.16 Score=30.76 Aligned_cols=34 Identities=24% Similarity=0.283 Sum_probs=25.5
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCcc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC 83 (226)
.|.|++|+..| ....|..|. ..|..+ +.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~-~~H~~~-k~~~C~~C 46 (46)
T 2en8_A 12 SHTCDECGKNFCYISALRIHQ-RVHMGE-KCSGPSSG 46 (46)
T ss_dssp SEECTTTCCEESSHHHHHHHH-TTTCCS-CSSCCSCC
T ss_pred CeECCCcCcccCCHHHHHHHH-HHhCCC-CCCCCCCC
Confidence 59999999955 567788897 456543 56789988
No 86
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.73 E-value=0.16 Score=30.91 Aligned_cols=34 Identities=24% Similarity=0.317 Sum_probs=25.7
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCcc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC 83 (226)
.|.|++|+..| ....|..|+. .|.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~C 46 (46)
T 2ep0_A 12 PYKCDVCHKSFRYGSSLTVHQR-IHTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHT-TTSS-SCCCSCCCC
T ss_pred CeeCcccCcccCChHHHHHHHH-HhCC-CCCCCCCCC
Confidence 59999999944 5678889974 4654 356789988
No 87
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=90.70 E-value=0.091 Score=32.12 Aligned_cols=34 Identities=21% Similarity=0.281 Sum_probs=24.9
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCcc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC 83 (226)
.|.|++|+..| ....|..|+.. |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2ely_A 12 PFKCVECGKGFSRRSALNVHHKL-HTG-EKPSGPSSG 46 (46)
T ss_dssp SBCCSSSCCCBSSTTHHHHHHHH-HSC-CSSCSCCCC
T ss_pred CcccCccCcccCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 59999999955 45778888754 543 356789988
No 88
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=90.70 E-value=0.11 Score=35.08 Aligned_cols=50 Identities=26% Similarity=0.458 Sum_probs=26.8
Q ss_pred eeC--CCCCCCc-cHhhhhhcccccCCCCCccccCCc--cccCcc--hhhHhhhhhccc
Q 027247 49 YPC--PFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV--CVTRVT--MDMVDHITTQHG 100 (226)
Q Consensus 49 f~C--PfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPV--C~~~v~--~d~i~Hl~~qH~ 100 (226)
|.| +.|+..| ....|..|.. .|.. .+.-.|++ |..... .++..|+...++
T Consensus 2 ~~C~~~~C~~~f~~~~~l~~H~~-~h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~ 58 (85)
T 2j7j_A 2 YVCHFENCGKAFKKHNQLKVHQF-SHTQ-QLPYECPHEGCDKRFSLPSRLKRHEKVHAG 58 (85)
T ss_dssp EECCSTTCCCEESSHHHHHHHHH-HHHT-TCCEECCSTTCCCEESSHHHHHHHHHHHHS
T ss_pred ccCCCCCCCcccCCHHHHHHHHH-HhCC-CCCeeCCCCCCcCccCCHHHHHHHHHHhCC
Confidence 566 5566643 4556666653 3332 23456666 655332 466666665555
No 89
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.59 E-value=0.18 Score=30.66 Aligned_cols=34 Identities=21% Similarity=0.290 Sum_probs=25.5
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCcc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC 83 (226)
.|.|+.|+..| ....|..|.. .|.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~~-~~~~~C~~C 46 (46)
T 2elz_A 12 PYKCEDCGKGYNRRLNLDMHQR-VHMG-EKTSGPSSG 46 (46)
T ss_dssp SCBCSSSCCBCSSHHHHHHHGG-GGGS-CCCCCSCCC
T ss_pred CeeCcccCchhCCHHHHHHHHH-hcCC-CCCCCCCCC
Confidence 59999999955 5677888975 5643 356789988
No 90
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.59 E-value=0.11 Score=31.61 Aligned_cols=34 Identities=18% Similarity=0.310 Sum_probs=25.4
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCcc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC 83 (226)
.|.|+.|+..| ....|..|.. .|.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~~~~~C~~C 46 (46)
T 2ysp_A 12 PYKCEKCGKGYNSKFNLDMHQK-VHTG-ERPSGPSSG 46 (46)
T ss_dssp SEEETTTTEEESCHHHHHHHHT-TSCS-CCSSCCSCC
T ss_pred CeECCCCCCccCCHHHHHHHHH-hhCC-CCCCCCCCC
Confidence 59999999954 5677888975 4654 356789988
No 91
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.57 E-value=0.074 Score=32.44 Aligned_cols=35 Identities=26% Similarity=0.320 Sum_probs=25.8
Q ss_pred ceeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCcc
Q 027247 47 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (226)
Q Consensus 47 ~~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC 83 (226)
..|.|++|+..| ....|..|+.. |..+ +.-.|++|
T Consensus 11 ~~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~C 46 (46)
T 2en6_A 11 KPYGCNECGKTFSQKSILSAHQRT-HTGE-KPSGPSSG 46 (46)
T ss_dssp CCEEETTTTEEESSHHHHHHHHHH-HSSC-CCSSSCCC
T ss_pred cCeECCCCCcccCchHHHHHHHHH-cCCC-CCCCCCCC
Confidence 359999999954 55778889754 6543 56789988
No 92
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=90.56 E-value=0.19 Score=36.57 Aligned_cols=53 Identities=23% Similarity=0.406 Sum_probs=38.6
Q ss_pred ceeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCc--cccCcc--hhhHhhhhhcccc
Q 027247 47 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV--CVTRVT--MDMVDHITTQHGN 101 (226)
Q Consensus 47 ~~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPV--C~~~v~--~d~i~Hl~~qH~~ 101 (226)
..|.|++|+..| ....|..|+.. |.. .+.-.|++ |..... .++..|+...++.
T Consensus 33 ~~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~ 90 (124)
T 1ubd_C 33 RVHVCAECGKAFVESSKLKRHQLV-HTG-EKPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 90 (124)
T ss_dssp CCEECTTTCCEESSHHHHHHHGGG-TSC-CCCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred CCeECCCCCchhCCHHHHHHHHHH-cCC-CCCeeCCCCCCcCccCCHHHHHHHHHHhCCC
Confidence 359999999954 67789999864 443 35578987 987543 5889998766553
No 93
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.50 E-value=0.17 Score=30.77 Aligned_cols=34 Identities=24% Similarity=0.380 Sum_probs=24.9
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCcc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC 83 (226)
.|.|++|+..| ....|..|+. .|.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~~~~~C~~C 46 (46)
T 2eml_A 12 PYECSVCGKAFSHRQSLSVHQR-IHSG-KKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHG-GGSS-CCCSCSSCC
T ss_pred CeeCCCcCCccCCHHHHHHHHH-HhcC-CCCCCCCCC
Confidence 59999999944 4577888975 4544 345789988
No 94
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.49 E-value=0.12 Score=31.38 Aligned_cols=34 Identities=24% Similarity=0.324 Sum_probs=25.1
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCcc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC 83 (226)
.|.|+.|+..| ....|..|.. .|..+ +.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-~~~~C~~C 46 (46)
T 2en1_A 12 PFKCEECGKRFTQNSQLHSHQR-VHTGE-KPSGPSSG 46 (46)
T ss_dssp SEEETTTTEEESSHHHHHHHGG-GGSCC-CCSCCCCC
T ss_pred CeeCCCCCcccCCHHHHHHHHH-HcCCC-CCCCCCCC
Confidence 59999999944 5567888974 46443 56789988
No 95
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.33 E-value=0.093 Score=32.08 Aligned_cols=34 Identities=26% Similarity=0.361 Sum_probs=24.9
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCcc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC 83 (226)
.|.|++|+..| ....|..|... |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2eoo_A 12 PYGCNECGKNFGRHSHLIEHLKR-HFR-EKSSGPSSG 46 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHHH-HHS-TTSSCCSCC
T ss_pred CEEccccCcccCCHHHHHHHHHH-HcC-CCCCCCCCC
Confidence 59999999954 55678888754 644 355789988
No 96
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.29 E-value=0.081 Score=32.44 Aligned_cols=34 Identities=21% Similarity=0.280 Sum_probs=24.7
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCcc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC 83 (226)
.|.|++|+..| ....|..|+.. |..+ +.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C~~C 46 (46)
T 2ytm_A 12 PYKCMECGKAFGDNSSCTQHQRL-HTGQ-RPSGPSSG 46 (46)
T ss_dssp SSSBTTTTBCCSSHHHHHHHHHH-HHSC-CCCCCCCC
T ss_pred CcCCCCCCchhCCHHHHHHHHHH-cCCC-CCCCCCCC
Confidence 59999999954 45778888754 5443 56789988
No 97
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.24 E-value=0.18 Score=30.62 Aligned_cols=34 Identities=29% Similarity=0.413 Sum_probs=24.8
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCcc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC 83 (226)
.|.|++|+..| ....|..|+. .|..+ +.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-~~~~C~~~ 46 (46)
T 2ep3_A 12 PYRCAECGKAFTDRSNLFTHQK-IHTGE-KPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHT-TTTTS-CCCCTTCC
T ss_pred CeECCCCCchhCCHHHHHHHHH-HcCCC-CCCCCCCC
Confidence 59999999944 5577888974 46543 56788886
No 98
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=89.95 E-value=0.19 Score=30.55 Aligned_cols=34 Identities=24% Similarity=0.380 Sum_probs=25.2
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCcc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC 83 (226)
.|.|++|+..| ....|..|.. .|.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~~~~~C~~C 46 (46)
T 2el6_A 12 PYKCSQCEKSFSGKLRLLVHQR-MHTR-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSSCEESSHHHHHHHHG-GGCC-SSCCSCCCC
T ss_pred CeECCCCCcccCCHHHHHHHHH-HcCC-CCCCCCCCC
Confidence 59999999944 5677888964 4654 355789988
No 99
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=89.95 E-value=0.13 Score=40.65 Aligned_cols=51 Identities=29% Similarity=0.544 Sum_probs=19.9
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCccccCcc--hhhHhhhhhccc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHG 100 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC~~~v~--~d~i~Hl~~qH~ 100 (226)
.|.|+.|+..| ....|..|+...+ . .+...|++|..... .++..|+...++
T Consensus 21 ~~~C~~C~~~f~~~~~l~~H~~~h~-~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 74 (190)
T 2i13_A 21 PYACPECGKSFSRSDHLAEHQRTHT-G-EKPYKCPECGKSFSDKKDLTRHQRTHTG 74 (190)
T ss_dssp ----------CCSSHHHHHGGGCC-----CCEECTTTCCEESSHHHHHHHHHHHHC
T ss_pred CCcCCCCccccCCHHHHHHHHHHcC-C-CCCccCCCcCchhCCHHHHHHHHHhcCC
Confidence 46777777644 3445666664322 1 23456777755332 456666654443
No 100
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.60 E-value=0.15 Score=30.92 Aligned_cols=34 Identities=21% Similarity=0.207 Sum_probs=25.0
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCcc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC 83 (226)
.|.|++|+..| ....|..|+. .|.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~C 46 (46)
T 2emm_A 12 PHKCNECGKSFIQSAHLIQHQR-IHTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHH-HHSC-CCTTSSSCC
T ss_pred CeeCCCCChhhCCHHHHHHHHH-HhCC-CCCCCCCCC
Confidence 59999999954 5677888974 4544 356789988
No 101
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.56 E-value=0.14 Score=31.14 Aligned_cols=34 Identities=21% Similarity=0.255 Sum_probs=25.1
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCcc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC 83 (226)
.|.|++|+..| ....|..|.. .|.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~~~~~C~~C 46 (46)
T 2ytd_A 12 PYKCSECGKAFHRHTHLNEHRR-IHTG-YRPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHH-HHTC-CCSSCSSCC
T ss_pred CeECCCCCCeeCChHHHHHHHH-HcCC-CCCCCCCCC
Confidence 59999999954 5577888964 4644 356789988
No 102
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.52 E-value=0.094 Score=32.05 Aligned_cols=34 Identities=26% Similarity=0.351 Sum_probs=24.8
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCcc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC 83 (226)
.|.|++|+..| ....|..|... |..+ +.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~C 46 (46)
T 2ytt_A 12 PYQCSECGKSFSGSYRLTQHWIT-HTRE-KPSGPSSG 46 (46)
T ss_dssp TTCCSSSCCCCSSHHHHHHHHTH-HHHC-CCCSCCCC
T ss_pred CeeCCCCCcccCCHHHHHHHHHH-cCCC-CCCCCCCC
Confidence 59999999944 56778888754 5433 45689888
No 103
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=89.25 E-value=0.15 Score=30.66 Aligned_cols=34 Identities=21% Similarity=0.334 Sum_probs=25.0
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCcc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC 83 (226)
.|.|+.|+..| ....|..|... |.. .+.-.|++|
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 44 (44)
T 2emx_A 10 PFGCSCCEKAFSSKSYLLVHQQT-HAE-EKPSGPSSG 44 (44)
T ss_dssp CEECSSSSCEESSHHHHHHHHHH-HTS-SCSCSCCCC
T ss_pred CccCCCCCcccCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 59999999944 46778889754 543 355789888
No 104
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.17 E-value=0.11 Score=31.56 Aligned_cols=34 Identities=24% Similarity=0.264 Sum_probs=24.8
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCcc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC 83 (226)
.|.|+.|+..| ....|..|.. .|..+ +.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-~~~~C~~C 46 (46)
T 2yu8_A 12 PYKCNECGKVFTQNSHLARHRR-VHTGG-KPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSSHHHHHHTH-HHHSC-CCSCSCCC
T ss_pred CeECCcCCchhCCHHHHHHHHH-hcCCC-CCCCCCCC
Confidence 59999999944 4577888864 45443 56789988
No 105
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=88.81 E-value=0.13 Score=31.16 Aligned_cols=35 Identities=23% Similarity=0.467 Sum_probs=26.2
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCccc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCV 84 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC~ 84 (226)
.|.|+.|+..| ....|..|+.. |.. .+.-.||+|.
T Consensus 10 ~~~C~~C~k~f~~~~~l~~H~~~-H~~-~~~~~C~~cg 45 (45)
T 2epq_A 10 PYSCPVCGLRFKRKDRMSYHVRS-HDG-SVGKSGPSSG 45 (45)
T ss_dssp SSEETTTTEECSCHHHHHHHHHH-HSC-CCCCCCCCCC
T ss_pred CCcCCCCCcccCCHHHHHHHHHH-ccC-CCCCCCcCCC
Confidence 59999999954 66778889754 544 4567899983
No 106
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=88.79 E-value=0.18 Score=33.96 Aligned_cols=48 Identities=21% Similarity=0.280 Sum_probs=36.1
Q ss_pred ceeeCCC--CCCC-ccHhhhhhcccccCCCCCccccCCc---cccCc--chhhHhhhhhcc
Q 027247 47 YEYPCPF--CSED-FDLVGLCCHIDEEHPVEAKSGVCPV---CVTRV--TMDMVDHITTQH 99 (226)
Q Consensus 47 ~~f~CPf--C~e~-~dv~~L~~H~~~eH~~e~~~vvCPV---C~~~v--~~d~i~Hl~~qH 99 (226)
..|.||+ |+.. .....|..|+...+. -.|++ |...- ..++..|+...|
T Consensus 30 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-----~~C~~~~~C~~~f~~~~~l~~H~~~hh 85 (85)
T 2j7j_A 30 LPYECPHEGCDKRFSLPSRLKRHEKVHAG-----YPCKKDDSCSFVGKTWTLYLKHVAECH 85 (85)
T ss_dssp CCEECCSTTCCCEESSHHHHHHHHHHHHS-----EECCSCSSCCCEESSHHHHHHHHHHCC
T ss_pred CCeeCCCCCCcCccCCHHHHHHHHHHhCC-----CCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence 3599999 9994 467889999865443 68999 97743 368899987665
No 107
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.57 E-value=0.16 Score=30.86 Aligned_cols=34 Identities=24% Similarity=0.268 Sum_probs=24.7
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCcc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC 83 (226)
.|.|++|+..| ....|..|+. .|.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~C 46 (46)
T 2emp_A 12 PYMCNECGKAFSVYSSLTTHQV-IHTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESCHHHHHHHHH-HHHC-CSCCSCCCC
T ss_pred CeECCCCCchhCCHHHHHHHHH-HcCC-CCCCCCCCC
Confidence 59999999944 5677888874 4543 356789888
No 108
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.53 E-value=0.19 Score=30.56 Aligned_cols=34 Identities=21% Similarity=0.380 Sum_probs=24.4
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCcc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC 83 (226)
.|.|++|+..| ....|..|.. .|.. .+.-.|+||
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~~ 46 (46)
T 2em2_A 12 PFKCKECGKAFRQNIHLASHLR-IHTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHH-HHCC-CCSSCSSCC
T ss_pred CEECCcCCchhCCHHHHHHHHH-HhCC-CCCCCCCCC
Confidence 59999999954 5577888864 4543 355788886
No 109
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=88.38 E-value=0.23 Score=33.86 Aligned_cols=52 Identities=19% Similarity=0.429 Sum_probs=32.7
Q ss_pred ceeeCCC--CCCCc-cHhhhhhcccccCCCCCccccCC--ccccCcc--hhhHhhhhhccc
Q 027247 47 YEYPCPF--CSEDF-DLVGLCCHIDEEHPVEAKSGVCP--VCVTRVT--MDMVDHITTQHG 100 (226)
Q Consensus 47 ~~f~CPf--C~e~~-dv~~L~~H~~~eH~~e~~~vvCP--VC~~~v~--~d~i~Hl~~qH~ 100 (226)
..|.|++ |+..| ....|..|+.. |.. .+.-.|| +|..... .++..|+...++
T Consensus 4 ~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~ 62 (89)
T 2wbs_A 4 ATHTCDYAGCGKTYTKSSHLKAHLRT-HTG-EKPYHCDWDGCGWKFARSDELTRHYRKHTG 62 (89)
T ss_dssp CCEECCSTTTCCEESSHHHHHHHHTT-SCS-SCCEECCSTTTCCEESSHHHHHHHHHHHHC
T ss_pred CCeeCCCCCCCCcCCCHHHHHHHHHh-cCC-CCCcCCCCCCCCCccCCHHHHHHHHHHcCC
Confidence 4688888 88844 56677788754 432 3446786 4866433 477778765444
No 110
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=88.17 E-value=0.23 Score=32.84 Aligned_cols=36 Identities=28% Similarity=0.562 Sum_probs=25.2
Q ss_pred eeeCCCCCCCccHhhhhhcccccCCCCCccccCCccccCc
Q 027247 48 EYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRV 87 (226)
Q Consensus 48 ~f~CPfC~e~~dv~~L~~H~~~eH~~e~~~vvCPVC~~~v 87 (226)
.|.||.|+..|....-.. ..|.. .+.-.|++|....
T Consensus 14 ~~~C~~C~k~F~~~~~l~---~~H~~-~k~~~C~~C~k~f 49 (62)
T 1vd4_A 14 SFKCPVCSSTFTDLEANQ---LFDPM-TGTFRCTFCHTEV 49 (62)
T ss_dssp EEECSSSCCEEEHHHHHH---HEETT-TTEEBCSSSCCBC
T ss_pred CccCCCCCchhccHHHhH---hhcCC-CCCEECCCCCCcc
Confidence 599999999877654332 45544 3567999997643
No 111
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.11 E-value=0.16 Score=30.95 Aligned_cols=34 Identities=21% Similarity=0.270 Sum_probs=24.9
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCcc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC 83 (226)
.|.|+.|+..| ....|..|+. .|.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~~~~~C~~C 46 (46)
T 2em8_A 12 PYKCVECGKGYKRRLDLDFHQR-VHTG-EKLSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHH-HHHC-CCCCCSCCC
T ss_pred CeECcccCchhCCHHHHHHHHH-HHcC-CCCCCCCCC
Confidence 59999999954 4577888975 4543 345789888
No 112
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=87.84 E-value=0.055 Score=35.63 Aligned_cols=45 Identities=13% Similarity=0.204 Sum_probs=29.6
Q ss_pred ceeeCCCCCCCccHhhhhhcccccCCCCCccccCCccccCcc--hhhHhhhhhcc
Q 027247 47 YEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQH 99 (226)
Q Consensus 47 ~~f~CPfC~e~~dv~~L~~H~~~eH~~e~~~vvCPVC~~~v~--~d~i~Hl~~qH 99 (226)
..|.|+.|+..|.......- .+.-.|++|..... .++..|+...+
T Consensus 17 ~~~~C~~C~k~f~~~~~l~~--------~~~~~C~~C~~~f~~~~~l~~H~~~H~ 63 (73)
T 2ctu_A 17 RSQKCSKCGIIFIRRSTLSR--------RKTPMCEKCRKDSCQEAALNKDEGNES 63 (73)
T ss_dssp SEEECSSSCCEEECCCCCCC--------SSSCCCHHHHHTCSCCCSSCCCSSCCC
T ss_pred CCeeCCcccchhCCHHHhCc--------CCCCCCCCCChhhcCHHHHHHHHHhhc
Confidence 35999999997654433221 45678999976543 46777765543
No 113
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=87.77 E-value=0.25 Score=29.93 Aligned_cols=34 Identities=26% Similarity=0.216 Sum_probs=24.9
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCcc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC 83 (226)
.|.|+.|+..| ....|..|.. .|.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~C 46 (46)
T 2yso_A 12 SHQCRECGEIFFQYVSLIEHQV-LHMG-QKNSGPSSG 46 (46)
T ss_dssp CEECTTTCCEESSHHHHHHHHH-HHSC-CSCCCTTCC
T ss_pred CEEccccChhhCCHHHHHHHHH-HhCC-CCCCCCCCC
Confidence 59999999955 4677888874 4543 355789888
No 114
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=87.35 E-value=0.2 Score=38.69 Aligned_cols=52 Identities=27% Similarity=0.439 Sum_probs=40.5
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCccccCcc--hhhHhhhhhcccc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQHGN 101 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC~~~v~--~d~i~Hl~~qH~~ 101 (226)
.|.|++|+..| ....|..|.. .|..+ +.-.|++|...-. .+|..|+...|+-
T Consensus 50 ~~~C~~C~k~F~~~~~L~~H~~-~H~~~-k~~~C~~C~k~F~~~~~L~~H~~~hh~~ 104 (133)
T 2lt7_A 50 KYPCRYCEKVFPLAEYRTKHEI-HHTGE-RRYQCLACGKSFINYQFMSSHIKSVHSQ 104 (133)
T ss_dssp CEECSSSSCEESSHHHHHHHHH-HHHTC-CCEEESSSCCEESSHHHHHHHHHHHTCC
T ss_pred CeeCCccCeecccccchhhhcc-ccCCC-ccccCCCCCCCcCCHHHHHHHhHHhcCC
Confidence 59999999955 5678999974 56543 5679999987543 6899999988874
No 115
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=87.20 E-value=0.45 Score=32.39 Aligned_cols=49 Identities=20% Similarity=0.398 Sum_probs=35.4
Q ss_pred ceeeCCC--CCCCc-cHhhhhhcccccCCCCCccccCCccccCcc--hhhHhhhhh
Q 027247 47 YEYPCPF--CSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITT 97 (226)
Q Consensus 47 ~~f~CPf--C~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC~~~v~--~d~i~Hl~~ 97 (226)
..|.||+ |+..| ....|..|+. .|..+ +.-.|++|...-. .++..|+..
T Consensus 34 ~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~-~~~~C~~C~~~f~~~~~l~~H~~~ 87 (89)
T 2wbs_A 34 KPYHCDWDGCGWKFARSDELTRHYR-KHTGH-RPFQCQKCDRAFSRSDHLALHMKR 87 (89)
T ss_dssp CCEECCSTTTCCEESSHHHHHHHHH-HHHCC-CCEECSSSSCEESSHHHHHHHGGG
T ss_pred CCcCCCCCCCCCccCCHHHHHHHHH-HcCCC-CCccCCCCCcccCCHHHHHHHHHh
Confidence 4599986 99955 6778889974 45443 4578999987543 578888753
No 116
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=86.78 E-value=0.56 Score=35.49 Aligned_cols=51 Identities=27% Similarity=0.403 Sum_probs=36.7
Q ss_pred eeCCCCCCCc-cHhhhhhcccccCCCCCccccCCc--cccCcc--hhhHhhhhhcccc
Q 027247 49 YPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV--CVTRVT--MDMVDHITTQHGN 101 (226)
Q Consensus 49 f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPV--C~~~v~--~d~i~Hl~~qH~~ 101 (226)
|.|++|+..| ....|..|+.. |.. .+.-.|++ |..... .++..|+...++.
T Consensus 63 ~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~ 118 (155)
T 2rpc_A 63 EECPREGKSFKAKYKLVNHIRV-HTG-EKPFPCPFPGCGKIFARSENLKIHKRTHTGE 118 (155)
T ss_dssp TTCTTSSCCCSSHHHHHHHTHH-HHC-CCSEECSCTTTCCEESCHHHHHHHHTTTCSS
T ss_pred cCCCCcccccCCHHHHHHHHHh-cCC-CCcccCCcCCCCCccCCHHHHHHHHHhhCCC
Confidence 8999999955 56778889864 432 35578988 977543 5888998766553
No 117
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=86.33 E-value=0.58 Score=36.72 Aligned_cols=51 Identities=24% Similarity=0.342 Sum_probs=38.3
Q ss_pred eeeC--CCCCC-CccHhhhhhcccccCCCCCccccCCc--cccCcc--hhhHhhhhhccc
Q 027247 48 EYPC--PFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPV--CVTRVT--MDMVDHITTQHG 100 (226)
Q Consensus 48 ~f~C--PfC~e-~~dv~~L~~H~~~eH~~e~~~vvCPV--C~~~v~--~d~i~Hl~~qH~ 100 (226)
.|.| +.|+. =-....|..|+.. |.. .+.-.||+ |...-. .++..|+...++
T Consensus 104 ~~~C~~~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~ 161 (190)
T 1tf6_A 104 VYVCHFENCGKAFKKHNQLKVHQFS-HTQ-QLPYECPHEGCDKRFSLPSRLKRHEKVHAG 161 (190)
T ss_dssp CCEECSSSSCEECSSHHHHHHHHGG-GSS-SCSSBCCSSSCCCBCSSHHHHHHHHTSSCS
T ss_pred eeeCCCCCCccccCCHHHHHHHHHH-hCC-CCCccCCCCCCCchhcCHHHHHHHHHHhCC
Confidence 5999 77999 5567889999864 543 35578988 987544 589999987666
No 118
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=86.24 E-value=0.16 Score=34.60 Aligned_cols=43 Identities=26% Similarity=0.359 Sum_probs=25.6
Q ss_pred ceeeCCCCCCCccHhh--hhhccc-----ccCCC-CCccccCCccccCcch
Q 027247 47 YEYPCPFCSEDFDLVG--LCCHID-----EEHPV-EAKSGVCPVCVTRVTM 89 (226)
Q Consensus 47 ~~f~CPfC~e~~dv~~--L~~H~~-----~eH~~-e~~~vvCPVC~~~v~~ 89 (226)
..+.||.|.+.+.... -|.|.- ..+-. ......||+|...+..
T Consensus 19 ~~~~C~IC~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 69 (73)
T 2ysl_A 19 EEVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRK 69 (73)
T ss_dssp CCCBCTTTCSBCSSEEECTTCCEEEHHHHHHHCSSSCSCCCCSSSCCCCCC
T ss_pred cCCEeccCCcccCCeEEcCCCChhhHHHHHHHHHcCCCCCCCCCCCCcCCc
Confidence 6799999999555321 244431 11111 1345689999887653
No 119
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=85.88 E-value=0.17 Score=40.31 Aligned_cols=50 Identities=12% Similarity=0.246 Sum_probs=29.9
Q ss_pred ccCCCcchhhhccCcceeeCCCCCCCc--cHhhhhhcccccCCCCCccccCCccccCcchhhHhh
Q 027247 32 FEDIEEDDYEEVKGEYEYPCPFCSEDF--DLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVDH 94 (226)
Q Consensus 32 ~e~~~~d~d~e~~~~~~f~CPfC~e~~--dv~~L~~H~~~eH~~e~~~vvCPVC~~~v~~d~i~H 94 (226)
+++++.+++++.+ .++|| ||..| ....|-. ...+.|+-|+..+..-|..|
T Consensus 99 ~~~m~~~e~~~~f---~~~Cr-CG~~f~i~~~~l~~---------~~~v~C~sCSl~~~v~~~~~ 150 (155)
T 2l6l_A 99 LEEMSWNEGDHSF---YLSCR-CGGKYSVSKDEAEE---------VSLISCDTCSLIIELLHYNH 150 (155)
T ss_dssp TTTSEEETTTTEE---EEECS-SSCEEEEETTHHHH---------CCEEECSSSSCEEEEECCCC
T ss_pred HHHhccccCCcEE---EEcCC-CCCeEEecHHHhCC---------CCEEECCCCceEEEEEEccc
Confidence 4455544332233 59999 99844 4444422 16789999998775444444
No 120
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=85.45 E-value=0.23 Score=34.38 Aligned_cols=42 Identities=17% Similarity=0.231 Sum_probs=25.3
Q ss_pred ceeeCCCCCCCccHhh--hhhcccccCCC----CCccccCCccccCcc
Q 027247 47 YEYPCPFCSEDFDLVG--LCCHIDEEHPV----EAKSGVCPVCVTRVT 88 (226)
Q Consensus 47 ~~f~CPfC~e~~dv~~--L~~H~~~eH~~----e~~~vvCPVC~~~v~ 88 (226)
..|.||.|.+-+.... -|-|.-...+. ......||+|...+.
T Consensus 7 ~~~~C~IC~~~~~~Pv~~~CgH~fc~~Ci~~~~~~~~~~CP~C~~~~~ 54 (78)
T 1t1h_A 7 EYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLL 54 (78)
T ss_dssp SSSSCTTTSCCCSSEEEETTTEEEEHHHHHHHHTTTCCBCTTTCCBCS
T ss_pred ccCCCCCccccccCCEEcCCCCeecHHHHHHHHHHCcCCCCCCcCCCC
Confidence 6799999998554322 24443222221 233678999988765
No 121
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=85.01 E-value=0.37 Score=34.54 Aligned_cols=47 Identities=26% Similarity=0.431 Sum_probs=19.0
Q ss_pred eeCC--CCCCCc-cHhhhhhcccccCCCCCccccCCccccCcc--hhhHhhhhh
Q 027247 49 YPCP--FCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITT 97 (226)
Q Consensus 49 f~CP--fC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC~~~v~--~d~i~Hl~~ 97 (226)
|.|+ .|+..| ....|..|+.. |.. .+.-.|++|..... .++..|+..
T Consensus 37 ~~C~~~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~ 88 (119)
T 2jp9_A 37 YQCDFKDCERRFSRSDQLKRHQRR-HTG-VKPFQCKTCQRKFSRSDHLKTHTRT 88 (119)
T ss_dssp EECCSTTCCCEESSHHHHHHHHHH-HHC-CCCEECTTTCCEESCHHHHHHHHHH
T ss_pred ccCCCCCCcCccCCHHHHHHHHHH-cCC-CCCccCCccCchhCCHHHHHHHHHH
Confidence 4555 255522 33444445432 211 22334555544322 344445443
No 122
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=83.87 E-value=0.48 Score=34.25 Aligned_cols=29 Identities=34% Similarity=0.888 Sum_probs=24.9
Q ss_pred eeeCCCCCCC-ccHhhhhhcccccCCCCCc
Q 027247 48 EYPCPFCSED-FDLVGLCCHIDEEHPVEAK 76 (226)
Q Consensus 48 ~f~CPfC~e~-~dv~~L~~H~~~eH~~e~~ 76 (226)
.|.|++|+.. .....|..|+...|+.|.+
T Consensus 56 ~~~C~~C~k~F~~~~~L~~H~~~~H~~E~R 85 (85)
T 2lv2_A 56 VFPCKYCPATFYSSPGLTRHINKCHPSENR 85 (85)
T ss_dssp SEECTTSSCEESSHHHHHHHHHTTCTTCCC
T ss_pred ccCCCCCCCEeCCHHHHHHhCcccCcCCCC
Confidence 5999999995 4788899999999998764
No 123
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=83.72 E-value=0.48 Score=31.49 Aligned_cols=34 Identities=26% Similarity=0.600 Sum_probs=21.3
Q ss_pred ceeeCCCCCCCccHhhhhhcccccCCCCCcc--ccCCcccc
Q 027247 47 YEYPCPFCSEDFDLVGLCCHIDEEHPVEAKS--GVCPVCVT 85 (226)
Q Consensus 47 ~~f~CPfC~e~~dv~~L~~H~~~eH~~e~~~--vvCPVC~~ 85 (226)
..|.|+.||--+|...--. .+++.-. -+||+|.+
T Consensus 3 ~~y~C~vCGyvyd~~~Gd~-----t~f~~lP~dw~CP~Cg~ 38 (46)
T 6rxn_A 3 QKYVCNVCGYEYDPAEHDN-----VPFDQLPDDWCCPVCGV 38 (46)
T ss_dssp CCEEETTTCCEECGGGGTT-----CCGGGSCTTCBCTTTCC
T ss_pred CEEECCCCCeEEeCCcCCC-----cchhhCCCCCcCcCCCC
Confidence 3689999998666432111 4444433 49999976
No 124
>1wii_A Hypothetical UPF0222 protein MGC4549; domain of unknown function, zinc finger, metal-binding protein, structural genomics; NMR {Mus musculus} SCOP: g.41.3.4
Probab=83.71 E-value=0.3 Score=36.43 Aligned_cols=35 Identities=20% Similarity=0.652 Sum_probs=22.0
Q ss_pred ceeeCCCCCCCccHhhhhhcccccCCCCCccccCCccccC
Q 027247 47 YEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTR 86 (226)
Q Consensus 47 ~~f~CPfC~e~~dv~~L~~H~~~eH~~e~~~vvCPVC~~~ 86 (226)
..|.||||+-+=.+ ++.-+.......+.|-+|...
T Consensus 22 t~F~CPfCnh~~sV-----~vkidk~~~~g~l~C~~Cg~~ 56 (85)
T 1wii_A 22 TQFTCPFCNHEKSC-----DVKMDRARNTGVISCTVCLEE 56 (85)
T ss_dssp SCCCCTTTCCSSCE-----EEEEETTTTEEEEEESSSCCE
T ss_pred CeEcCCCCCCCCeE-----EEEEEccCCEEEEEcccCCCe
Confidence 68999999984221 222333334556789999763
No 125
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=83.63 E-value=0.56 Score=25.15 Aligned_cols=26 Identities=27% Similarity=0.489 Sum_probs=18.5
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCC
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPV 73 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~ 73 (226)
.|.|+.|+..| ....|..|+...|..
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~ 28 (30)
T 1paa_A 2 AYACGLCNRAFTRRDLLIRHAQKIHSG 28 (30)
T ss_dssp CSBCTTTCCBCSSSHHHHHHHTTTSCC
T ss_pred CcCCcccCcccCChHHHHHHHHHHccC
Confidence 38899999965 456788885556653
No 126
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=83.06 E-value=0.71 Score=32.04 Aligned_cols=51 Identities=24% Similarity=0.389 Sum_probs=36.8
Q ss_pred ceeeCCC--CCCC-ccHhhhhhcccccCCCCCccccCCccccCcc--hhhHhhhhhcc
Q 027247 47 YEYPCPF--CSED-FDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT--MDMVDHITTQH 99 (226)
Q Consensus 47 ~~f~CPf--C~e~-~dv~~L~~H~~~eH~~e~~~vvCPVC~~~v~--~d~i~Hl~~qH 99 (226)
..|.||+ |+.. -....|..|+.. |.. .+.-.|++|...-. .++..|+...+
T Consensus 44 ~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~H~ 99 (100)
T 2ebt_A 44 KPYKCTWEGCDWRFARSDELTRHYRK-HTG-AKPFQCGVCNRSFSRSDHLALHMKRHQ 99 (100)
T ss_dssp CCEECCSSSCCCEESSHHHHHHHHHH-HTS-CCSCBCSSSCCBCSSHHHHHHHHHHHC
T ss_pred CCeeCCCCCCCCccCCHHHHHHHHHH-hCC-CCCeECCCCcCccCCHHHHHHHHHHhC
Confidence 3599986 9994 467788999854 443 35578999987543 58889986543
No 127
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=82.96 E-value=0.8 Score=27.48 Aligned_cols=33 Identities=24% Similarity=0.365 Sum_probs=21.4
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV 82 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPV 82 (226)
.|.|++|+..| ....|..|+.. |..+ +.-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2ep1_A 12 PYECSDCGKSFIKKSQLHVHQRI-HTGE-NPSGPSS 45 (46)
T ss_dssp SSCCSSSCCCCSSHHHHHHHHGG-GSSS-CCCSSSC
T ss_pred CcCCCCCCchhCCHHHHHHHHHH-hCCC-CCCCCCC
Confidence 48888888854 45677778643 5433 4456664
No 128
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=82.33 E-value=0.62 Score=33.32 Aligned_cols=52 Identities=23% Similarity=0.501 Sum_probs=38.2
Q ss_pred ceeeCCC--CCCCc-cHhhhhhcccccCCCCCccccCC--ccccCcc--hhhHhhhhhccc
Q 027247 47 YEYPCPF--CSEDF-DLVGLCCHIDEEHPVEAKSGVCP--VCVTRVT--MDMVDHITTQHG 100 (226)
Q Consensus 47 ~~f~CPf--C~e~~-dv~~L~~H~~~eH~~e~~~vvCP--VC~~~v~--~d~i~Hl~~qH~ 100 (226)
..|.|++ |+..| ....|..|+.. |.. .+.-.|+ +|...-. .++..|+...++
T Consensus 5 ~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~ 63 (119)
T 2jp9_A 5 RPFMCAYPGCNKRYFKLSHLQMHSRK-HTG-EKPYQCDFKDCERRFSRSDQLKRHQRRHTG 63 (119)
T ss_dssp CCBCCCSTTSCCCBSCHHHHHHHHHH-HHT-TCCEECCSTTCCCEESSHHHHHHHHHHHHC
T ss_pred eeeeCCCCCCcchhCCHHHHHHHHHh-hCC-CCCccCCCCCCcCccCCHHHHHHHHHHcCC
Confidence 3599998 99954 67889999864 433 3457899 7977543 689999987554
No 129
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=81.66 E-value=0.87 Score=30.04 Aligned_cols=48 Identities=21% Similarity=0.385 Sum_probs=34.4
Q ss_pred ceeeCCC--CCCCc-cHhhhhhcccccCCCCCccccCCc--cccCcc--hhhHhhhh
Q 027247 47 YEYPCPF--CSEDF-DLVGLCCHIDEEHPVEAKSGVCPV--CVTRVT--MDMVDHIT 96 (226)
Q Consensus 47 ~~f~CPf--C~e~~-dv~~L~~H~~~eH~~e~~~vvCPV--C~~~v~--~d~i~Hl~ 96 (226)
..|.|++ |+..| ....|..|+. .|.. .+.-.|++ |..... .++..|+.
T Consensus 16 ~~~~C~~~~C~k~f~~~~~L~~H~~-~H~~-~~~~~C~~~~C~k~f~~~~~l~~H~~ 70 (72)
T 2epa_A 16 RSHICSHPGCGKTYFKSSHLKAHTR-THTG-EKPFSCSWKGCERRFARSDELSRHRR 70 (72)
T ss_dssp CCEECSSTTTCCEESSHHHHHHHHH-HHSS-SCSEECCCTTCCCEESSHHHHHHHTT
T ss_pred CceeCCCCCCccccCCHHHHHHHHH-hcCC-CCCccCCCCCCCcccCCHHHHHhHhh
Confidence 4699999 99955 5778889985 4543 35678976 987543 57777764
No 130
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=81.60 E-value=0.63 Score=28.05 Aligned_cols=33 Identities=30% Similarity=0.475 Sum_probs=21.3
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV 82 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPV 82 (226)
.|.|++|+..| ....|..|... |..+ +.-.|++
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~~-~~~~C~~ 45 (46)
T 2em3_A 12 PYECKVCSKAFTQKAHLAQHQKT-HTGE-KPSGPSS 45 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-HCCC-CCCCSCC
T ss_pred CeECCCCCcccCCHHHHHHHHHH-hCCC-CCCCCCC
Confidence 48899998844 45667778743 5433 4456664
No 131
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=81.52 E-value=0.58 Score=29.31 Aligned_cols=28 Identities=21% Similarity=0.291 Sum_probs=22.9
Q ss_pred ceeeCCCCCC-CccHhhhhhcccccCCCC
Q 027247 47 YEYPCPFCSE-DFDLVGLCCHIDEEHPVE 74 (226)
Q Consensus 47 ~~f~CPfC~e-~~dv~~L~~H~~~eH~~e 74 (226)
+-|.||.|-+ =-+...|..|-+..|..+
T Consensus 4 EGFiCP~C~~~l~s~~~L~~Hye~~H~~~ 32 (34)
T 3mjh_B 4 EGFICPQCMKSLGSADELFKHYEAVHDAG 32 (34)
T ss_dssp EEEECTTTCCEESSHHHHHHHHHHHTSSS
T ss_pred cccCCcHHHHHcCCHHHHHHHHHhccccC
Confidence 4599999999 456788999999999764
No 132
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=81.49 E-value=1.1 Score=26.87 Aligned_cols=33 Identities=21% Similarity=0.330 Sum_probs=21.9
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV 82 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPV 82 (226)
.|.|++|+..| ....|..|.. .|..+ +.-.|+|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-~~~~C~~ 45 (46)
T 2emg_A 12 PFICSECGKVFTHKTNLIIHQK-IHTGE-RPSGPSS 45 (46)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHT-TTSCC-CCSCSCC
T ss_pred CEECCccCcccCCHHHHHHHHH-HhCCC-CCCCCCC
Confidence 48899999854 4567888864 45433 4456764
No 133
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=81.30 E-value=1.2 Score=26.94 Aligned_cols=33 Identities=24% Similarity=0.382 Sum_probs=21.8
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV 82 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPV 82 (226)
.|.|+.|+..| ....|..|+. .|..+ +.-.||+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-k~~~C~~ 45 (46)
T 2eon_A 12 PYKCQVCGKAFRVSSHLVQHHS-VHSGE-RPSGPSS 45 (46)
T ss_dssp SCBCSSSCCBCSSHHHHHHHTT-TTTSC-CSCTTSC
T ss_pred ccCCCCCCcccCcHHHHHHHHH-hcCCC-CCCCCCC
Confidence 48899999944 4566788864 45543 4456764
No 134
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=81.18 E-value=1.1 Score=26.89 Aligned_cols=33 Identities=27% Similarity=0.392 Sum_probs=21.3
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV 82 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPV 82 (226)
.|.|++|+..| ....|..|+. .|..+ +.-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-k~~~C~~ 45 (46)
T 2eq2_A 12 PYQCNECGKAFSQTSKLARHQR-VHTGE-KPSGPSS 45 (46)
T ss_dssp SSSCCSSCCCCSSHHHHHHHGG-GGCCC-CCCCCCC
T ss_pred CeECCCCCcccCCHHHHHHHHH-HcCCC-CCCCCCC
Confidence 48899998854 4566778864 45443 4456664
No 135
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=80.91 E-value=1 Score=27.03 Aligned_cols=33 Identities=27% Similarity=0.394 Sum_probs=21.6
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV 82 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPV 82 (226)
.|.|++|+..| ....|..|.. .|..+ +.-.|++
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~~~-k~~~C~~ 45 (46)
T 2emi_A 12 HYECSECGKAFIQKSTLSMHQR-IHRGE-KPSGPSS 45 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHG-GGCSC-CCCSCCC
T ss_pred CCCCCCCCcccCCHHHHHHHHh-HhCCC-CCCCCCC
Confidence 58899999854 4577888864 45433 4456664
No 136
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=80.84 E-value=1.2 Score=26.60 Aligned_cols=33 Identities=27% Similarity=0.329 Sum_probs=22.0
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV 82 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPV 82 (226)
.|.|++|+..| ....|..|.. .|..+ +.-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-~p~~C~~ 45 (46)
T 2yts_A 12 PYICNECGKSFIQKSHLNRHRR-IHTGE-KPSGPSS 45 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHGG-GTSSC-CSSCCCC
T ss_pred CEECCCCChhhCChHHHHHHHH-hcCCC-CCcCCCC
Confidence 58999999944 5567888864 55443 4456664
No 137
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=80.63 E-value=0.63 Score=33.43 Aligned_cols=29 Identities=28% Similarity=0.635 Sum_probs=21.9
Q ss_pred ceeeCCCCCCCccHhhhhhcccccCCCCCccccCCccccCc
Q 027247 47 YEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRV 87 (226)
Q Consensus 47 ~~f~CPfC~e~~dv~~L~~H~~~eH~~e~~~vvCPVC~~~v 87 (226)
-.|.|+-||..|++. +...+.||-|..++
T Consensus 27 v~Y~C~~CG~~~e~~------------~~d~irCp~CG~RI 55 (70)
T 1twf_L 27 LKYICAECSSKLSLS------------RTDAVRCKDCGHRI 55 (70)
T ss_dssp CCEECSSSCCEECCC------------TTSTTCCSSSCCCC
T ss_pred EEEECCCCCCcceeC------------CCCCccCCCCCceE
Confidence 579999999987653 23457899997654
No 138
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=80.42 E-value=0.13 Score=36.85 Aligned_cols=41 Identities=22% Similarity=0.447 Sum_probs=24.6
Q ss_pred ceeeCCCCCCCccH-hhh--hhccc-----ccCCCCCccccCCccccCc
Q 027247 47 YEYPCPFCSEDFDL-VGL--CCHID-----EEHPVEAKSGVCPVCVTRV 87 (226)
Q Consensus 47 ~~f~CPfC~e~~dv-~~L--~~H~~-----~eH~~e~~~vvCPVC~~~v 87 (226)
..|.||.|.+.|.. ..| |-|.- ..+-.......||+|...+
T Consensus 12 ~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~ 60 (92)
T 3ztg_A 12 DELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCHQND 60 (92)
T ss_dssp TTTEETTTTEECSSCEECTTTCCEECHHHHHHHHHHCTTCCCTTTCCSS
T ss_pred cCCCCCCCChhhcCceECCCCCCHHHHHHHHHHHHhcCCCcCcCCCCcC
Confidence 67999999985443 233 45532 2222223346899998764
No 139
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=80.01 E-value=1.2 Score=26.81 Aligned_cols=33 Identities=27% Similarity=0.380 Sum_probs=22.2
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV 82 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPV 82 (226)
.|.|++|+..| ....|..|.. .|..+ +.-.||+
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~~~-k~~~C~~ 45 (46)
T 2ytp_A 12 HYECSECGKAFARKSTLIMHQR-IHTGE-KPSGPSS 45 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHT-TTSCC-CCCSSCC
T ss_pred CeECCcCCcccCCHHHHHHHHH-HhCCC-CCCCCCC
Confidence 58999999944 5677888864 45433 4566764
No 140
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=79.97 E-value=1.2 Score=26.65 Aligned_cols=33 Identities=27% Similarity=0.328 Sum_probs=21.5
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV 82 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPV 82 (226)
.|.|++|+..| ....|..|.. .|..+ +.-.|++
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~~~-k~~~C~~ 45 (46)
T 2enf_A 12 PYKCNECGKVFTQNSHLVRHRG-IHTGE-KPSGPSS 45 (46)
T ss_dssp SCBCSSSCCBCSSHHHHHHHHT-TTTTS-SCCCCSC
T ss_pred CeECCCCCcccCCHHHHHHHHH-hhCCC-CCCCCCC
Confidence 58899999844 4567778863 45433 4456664
No 141
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=79.89 E-value=1.3 Score=26.60 Aligned_cols=33 Identities=24% Similarity=0.354 Sum_probs=20.4
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV 82 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPV 82 (226)
.|.|+.|+..| ....|..|.. .|..+ +.-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-k~~~C~~ 45 (46)
T 2yth_A 12 PFQCEECGKRFTQNSHLHSHQR-VHTGE-KPSGPSS 45 (46)
T ss_dssp SBCCSSSCCCBSSHHHHHHHGG-GGTTC-CCSSCCC
T ss_pred CCCCCCCCcccCCHHHHHHHHH-hcCCC-CCCCCCC
Confidence 48888888844 4566777764 45433 4455653
No 142
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=79.45 E-value=0.83 Score=31.47 Aligned_cols=42 Identities=31% Similarity=0.713 Sum_probs=27.4
Q ss_pred ceeeCCCCCCCccHhh-----hhhcccccCCCC---CccccCCccccCcc
Q 027247 47 YEYPCPFCSEDFDLVG-----LCCHIDEEHPVE---AKSGVCPVCVTRVT 88 (226)
Q Consensus 47 ~~f~CPfC~e~~dv~~-----L~~H~~~eH~~e---~~~vvCPVC~~~v~ 88 (226)
..+.||.|.+.|.... -|.|.-=.++.. .+...||+|...+.
T Consensus 14 ~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~ 63 (78)
T 2ect_A 14 SGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQHDSCPVCRKSLT 63 (78)
T ss_dssp SSCCCTTTTSCCCTTSCEEECTTSCEEETTTTHHHHTTTCSCTTTCCCCC
T ss_pred CCCCCeeCCccccCCCCEEEeCCCCeecHHHHHHHHHcCCcCcCcCCccC
Confidence 5689999988775331 377764444442 13468999977664
No 143
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=79.07 E-value=1.2 Score=26.73 Aligned_cols=33 Identities=27% Similarity=0.324 Sum_probs=21.2
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV 82 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPV 82 (226)
.|.|++|+..| ....|..|. ..|..+ +.-.|++
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~-~~H~~~-k~~~C~~ 45 (46)
T 2yti_A 12 PYKCNECGKVFTQNSHLARHR-GIHTGE-KPSGPSS 45 (46)
T ss_dssp TTCCSSSCCCCSSHHHHHHHH-TTTSCS-CCSSTTC
T ss_pred CeECCCCCcccCChhHHHHHh-HhcCCC-CCCCCCC
Confidence 48899998855 456677786 445433 4456664
No 144
>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}
Probab=78.93 E-value=0.59 Score=35.20 Aligned_cols=14 Identities=36% Similarity=1.068 Sum_probs=11.5
Q ss_pred ceeeCCCCCCCccH
Q 027247 47 YEYPCPFCSEDFDL 60 (226)
Q Consensus 47 ~~f~CPfC~e~~dv 60 (226)
-.|+||.||++|--
T Consensus 50 F~FkCP~CgEEFyG 63 (95)
T 2k5c_A 50 FVFKCPVCGEEFYG 63 (95)
T ss_dssp SEEECTTTCCEEET
T ss_pred HhhcCCCccHHHhc
Confidence 47999999998743
No 145
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=78.91 E-value=0.78 Score=31.46 Aligned_cols=43 Identities=28% Similarity=0.447 Sum_probs=25.5
Q ss_pred ceeeCCCCCCCccHhh--hhhcc-----cccCCCC-----CccccCCccccCcch
Q 027247 47 YEYPCPFCSEDFDLVG--LCCHI-----DEEHPVE-----AKSGVCPVCVTRVTM 89 (226)
Q Consensus 47 ~~f~CPfC~e~~dv~~--L~~H~-----~~eH~~e-----~~~vvCPVC~~~v~~ 89 (226)
..+.||.|.+.+.... -|.|. -..+-.. .....||+|...+..
T Consensus 11 ~~~~C~IC~~~~~~p~~l~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~~ 65 (79)
T 2egp_A 11 EEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSF 65 (79)
T ss_dssp CCCEETTTTEECSSCCCCSSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCCCS
T ss_pred cCCCCcCCCcccCCeeECCCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcCCH
Confidence 5799999998554322 24442 2222222 236789999887753
No 146
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=78.75 E-value=1.4 Score=26.35 Aligned_cols=33 Identities=27% Similarity=0.358 Sum_probs=21.4
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV 82 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPV 82 (226)
.|.|++|+..| ....|..|.. .|..+ +.-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-k~~~C~~ 45 (46)
T 2eq1_A 12 PYKCNECGKAFRAHSNLTTHQV-IHTGE-KPSGPSS 45 (46)
T ss_dssp CCCCTTTTCCCSSHHHHHHHHT-TTCCS-CCSSCCC
T ss_pred CeECCcCChhhCCHHHHHHHHH-HhCCC-CCCCCCC
Confidence 48899999855 4567788864 45433 4456654
No 147
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=77.76 E-value=1 Score=27.02 Aligned_cols=33 Identities=27% Similarity=0.414 Sum_probs=20.7
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV 82 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPV 82 (226)
.|.|++|+..| ....|..|+. .|..+ +.-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-k~~~C~~ 45 (46)
T 2eow_A 12 PYKCNECGKAFRARSSLAIHQA-THSGE-KPSGPSS 45 (46)
T ss_dssp CEECTTSCCEESSHHHHHHHHH-HHCCC-SCSCTTC
T ss_pred CeeccccCChhcCHHHHHHHHH-HcCCC-CCCCCCC
Confidence 48888888844 4566777864 45433 4456654
No 148
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=77.66 E-value=1.4 Score=27.87 Aligned_cols=28 Identities=29% Similarity=0.532 Sum_probs=22.7
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCC
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEA 75 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~ 75 (226)
.|.|++|+..| ....|..|+...|..+.
T Consensus 30 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~ 58 (60)
T 2adr_A 30 PYPCGLCNRAFTRRDLLIRHAQKIHSGNL 58 (60)
T ss_dssp SEECTTTCCEESSHHHHHHHHTTTSCCSS
T ss_pred CccCCCCCCccCCHHHHHHHHHHHcCCcC
Confidence 59999999955 67889999888887543
No 149
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=77.66 E-value=1.4 Score=26.52 Aligned_cols=34 Identities=26% Similarity=0.301 Sum_probs=21.9
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV 82 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPV 82 (226)
.|.|+.|+..| ....|..|. ..|....+.-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~~C~~ 46 (46)
T 2eoy_A 12 CFKCNKCEKTFSCSKYLTQHE-RIHTRGVKSGPSSG 46 (46)
T ss_dssp CEECSSSCCEESSSHHHHHHH-TTCCSCCTTSSSCC
T ss_pred CEECcCCCCcCCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence 48899999854 456778886 44554134456664
No 150
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=77.58 E-value=1 Score=32.35 Aligned_cols=35 Identities=20% Similarity=0.137 Sum_probs=22.0
Q ss_pred ceeeCCCCCCC------------ccHhhhhhcccccCCCCCccccCCccccCcc
Q 027247 47 YEYPCPFCSED------------FDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT 88 (226)
Q Consensus 47 ~~f~CPfC~e~------------~dv~~L~~H~~~eH~~e~~~vvCPVC~~~v~ 88 (226)
..|.||.|.+- |+...+..|+.. +..||+|...+.
T Consensus 13 ~~~~CpI~~~~m~dPV~~~cGhtf~r~~I~~~l~~-------~~~cP~~~~~l~ 59 (85)
T 2kr4_A 13 DEFRDPLMDTLMTDPVRLPSGTVMDRSIILRHLLN-------SPTDPFNRQMLT 59 (85)
T ss_dssp TTTBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHH-------CSBCTTTCCBCC
T ss_pred hheECcccCchhcCCeECCCCCEECHHHHHHHHhc-------CCCCCCCcCCCC
Confidence 57999988763 333333333321 468999988665
No 151
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=77.21 E-value=1.4 Score=35.00 Aligned_cols=47 Identities=26% Similarity=0.375 Sum_probs=30.5
Q ss_pred eeeCC--CCCCCccHhhhhhcccccCCCCCccccCCccccCcc-hhhHhhhhh
Q 027247 48 EYPCP--FCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT-MDMVDHITT 97 (226)
Q Consensus 48 ~f~CP--fC~e~~dv~~L~~H~~~eH~~e~~~vvCPVC~~~v~-~d~i~Hl~~ 97 (226)
.+.|| -|.+-+.+..|..|. .+= +-+.+.||-|...+. .++..|+..
T Consensus 82 ~v~C~n~GC~~~~~~~~l~~H~-~~C--~~~~v~C~~C~~~~~r~~l~~H~~~ 131 (170)
T 3hcs_A 82 MVKCPNEGCLHKMELRHLEDHQ-AHC--EFALMDCPQCQRPFQKFHINIHILK 131 (170)
T ss_dssp EEECCSTTCCCEEEGGGHHHHH-TTC--TTSEEECTTTCCEEEGGGHHHHHHH
T ss_pred ccCCCCCCCCceecHhHHHHHH-hcC--CceeeECCCCChHHHHHHHHHHhhh
Confidence 47785 477777788888775 221 234577888877543 577777743
No 152
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=77.10 E-value=1 Score=27.19 Aligned_cols=33 Identities=24% Similarity=0.337 Sum_probs=20.7
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV 82 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPV 82 (226)
.|.|++|+..| ....|..|.. .|..+ +.-.|+|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~~~-k~~~C~~ 45 (46)
T 2emj_A 12 PFECAECGKSFSISSQLATHQR-IHTGE-KPSGPSS 45 (46)
T ss_dssp SEECSSSSCEESSHHHHHHHHH-HHTTS-CSSSSCC
T ss_pred CEECCCCCcccCCHHHHHHHHH-HhCCC-CCCCCCC
Confidence 48888888844 4566777864 35433 4456664
No 153
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=77.10 E-value=1.8 Score=32.15 Aligned_cols=35 Identities=20% Similarity=0.150 Sum_probs=22.0
Q ss_pred ceeeCCCCCCCc------------cHhhhhhcccccCCCCCccccCCccccCcc
Q 027247 47 YEYPCPFCSEDF------------DLVGLCCHIDEEHPVEAKSGVCPVCVTRVT 88 (226)
Q Consensus 47 ~~f~CPfC~e~~------------dv~~L~~H~~~eH~~e~~~vvCPVC~~~v~ 88 (226)
..|.||.|.+-+ +...+..|+. .+..||+|...+.
T Consensus 28 ~~~~CpI~~~~m~dPV~~~cGhtf~r~~I~~~l~-------~~~~cP~~~~~l~ 74 (100)
T 2kre_A 28 DEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLL-------NSPTDPFNRQTLT 74 (100)
T ss_dssp TTTBCTTTCSBCSSEEEETTTEEEEHHHHHHHTT-------SCSBCSSSCCBCC
T ss_pred HhhCCcCccCcccCCeECCCCCEEchHHHHHHHH-------cCCCCCCCCCCCC
Confidence 689999987733 2333333332 2468999988664
No 154
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=77.06 E-value=1.5 Score=26.20 Aligned_cols=33 Identities=24% Similarity=0.395 Sum_probs=21.2
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV 82 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPV 82 (226)
.|.|++|+..| ....|..|.. .|..+ +.-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-k~~~C~~ 45 (46)
T 2ytf_A 12 PFECSECQKAFNTKSNLIVHQR-THTGE-KPSGPSS 45 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHH-TSCSS-SSSCCCC
T ss_pred CcCCCCCCcccCCHHHHHHHHH-HhCCC-CCCCCCC
Confidence 48899998844 5667778864 45433 3455654
No 155
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=76.47 E-value=0.52 Score=31.63 Aligned_cols=43 Identities=21% Similarity=0.318 Sum_probs=25.9
Q ss_pred ceeeCCCCCCCccHh--hhhhcccccCCC----CCccccCCccccCcch
Q 027247 47 YEYPCPFCSEDFDLV--GLCCHIDEEHPV----EAKSGVCPVCVTRVTM 89 (226)
Q Consensus 47 ~~f~CPfC~e~~dv~--~L~~H~~~eH~~----e~~~vvCPVC~~~v~~ 89 (226)
..+.||.|.+.+... .-|.|.-=..+. ......||+|...+..
T Consensus 14 ~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 62 (66)
T 2ecy_A 14 DKYKCEKCHLVLCSPKQTECGHRFCESCMAALLSSSSPKCTACQESIVK 62 (66)
T ss_dssp CCEECTTTCCEESSCCCCSSSCCCCHHHHHHHHTTSSCCCTTTCCCCCT
T ss_pred cCCCCCCCChHhcCeeECCCCCHHHHHHHHHHHHhCcCCCCCCCcCCCh
Confidence 679999999855432 234443222221 2455789999887654
No 156
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=76.29 E-value=1.7 Score=25.88 Aligned_cols=33 Identities=27% Similarity=0.376 Sum_probs=21.2
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV 82 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPV 82 (226)
.|.|++|+..| ....|..|+. .|..+ +.-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-k~~~C~~ 45 (46)
T 2yrj_A 12 PYRCGECGKAFAQKANLTQHQR-IHTGE-KPSGPSS 45 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHT-TTSSC-CSSCSCC
T ss_pred CeECCCCCCccCCHHHHHHHHH-HcCCC-CCCCCCC
Confidence 48899998844 4567778864 45433 4456664
No 157
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=76.17 E-value=1.7 Score=25.41 Aligned_cols=32 Identities=25% Similarity=0.397 Sum_probs=18.6
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCC
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCP 81 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCP 81 (226)
.|.|++|+..| ....|..|.. .|..+ +.-.||
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-~~~~C~ 42 (42)
T 2el5_A 10 PYECSECGKAFNRKDQLISHQR-THAGE-SGPSSG 42 (42)
T ss_dssp SEECSSSCCEESSHHHHHHHHG-GGCCC-CSCCCC
T ss_pred CccCCCcChhhCCHHHHHHHHH-hcCCC-CCCCCC
Confidence 48888888844 4456777763 34433 334443
No 158
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=76.12 E-value=2.2 Score=31.58 Aligned_cols=41 Identities=17% Similarity=0.070 Sum_probs=22.0
Q ss_pred ceeeCCCCCCCcc-Hhhh-hh-cccccCC----CCCccccCCccccCcc
Q 027247 47 YEYPCPFCSEDFD-LVGL-CC-HIDEEHP----VEAKSGVCPVCVTRVT 88 (226)
Q Consensus 47 ~~f~CPfC~e~~d-v~~L-~~-H~~~eH~----~e~~~vvCPVC~~~v~ 88 (226)
..|.||.|.+-|. -+.+ |. |.-+.-+ .. .+..||+|...+.
T Consensus 21 ~~~~CpI~~~~m~dPV~~~cG~htf~r~cI~~~l~-~~~~cP~~~~~l~ 68 (98)
T 1wgm_A 21 DEFLDPIMSTLMCDPVVLPSSRVTVDRSTIARHLL-SDQTDPFNRSPLT 68 (98)
T ss_dssp TTTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHTT-TSCBCTTTCSBCC
T ss_pred HhcCCcCccccccCCeECCCCCeEECHHHHHHHHH-hCCCCCCCCCCCC
Confidence 6799999876332 2211 22 3222111 01 1468999988665
No 159
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=75.13 E-value=1.6 Score=28.69 Aligned_cols=42 Identities=21% Similarity=0.358 Sum_probs=27.5
Q ss_pred ceeeCCCCCCCccHhh--hhhcccccCCCCCccccCCccccCcc
Q 027247 47 YEYPCPFCSEDFDLVG--LCCHIDEEHPVEAKSGVCPVCVTRVT 88 (226)
Q Consensus 47 ~~f~CPfC~e~~dv~~--L~~H~~~eH~~e~~~vvCPVC~~~v~ 88 (226)
..+.||.|.+.|.... =|.|.-=..+.......||+|...+.
T Consensus 5 ~~~~C~IC~~~~~~p~~l~CgH~fC~~Ci~~~~~~CP~Cr~~~~ 48 (56)
T 1bor_A 5 QFLRCQQCQAEAKCPKLLPCLHTLCSGCLEASGMQCPICQAPWP 48 (56)
T ss_dssp CCSSCSSSCSSCBCCSCSTTSCCSBTTTCSSSSSSCSSCCSSSS
T ss_pred cCCCceEeCCccCCeEEcCCCCcccHHHHccCCCCCCcCCcEee
Confidence 4688999999655432 25554444444556678999987653
No 160
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=75.10 E-value=1.6 Score=35.87 Aligned_cols=25 Identities=36% Similarity=0.724 Sum_probs=17.6
Q ss_pred ceeeCCCCCCCccHhhhhhcccccCCCCCccccCCcccc
Q 027247 47 YEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVT 85 (226)
Q Consensus 47 ~~f~CPfC~e~~dv~~L~~H~~~eH~~e~~~vvCPVC~~ 85 (226)
..|.||.||.=++- + -+.+||||..
T Consensus 137 ~~~~C~~CG~i~~~-------------~-~p~~CP~Cg~ 161 (170)
T 3pwf_A 137 KVYICPICGYTAVD-------------E-APEYCPVCGA 161 (170)
T ss_dssp CEEECTTTCCEEES-------------C-CCSBCTTTCC
T ss_pred CeeEeCCCCCeeCC-------------C-CCCCCCCCCC
Confidence 56899999984441 1 2349999975
No 161
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=75.07 E-value=0.58 Score=31.03 Aligned_cols=14 Identities=29% Similarity=0.629 Sum_probs=11.1
Q ss_pred ceeeCCCCCCCccH
Q 027247 47 YEYPCPFCSEDFDL 60 (226)
Q Consensus 47 ~~f~CPfC~e~~dv 60 (226)
..+.||.|.+.+..
T Consensus 19 ~~~~C~IC~~~~~~ 32 (63)
T 2ysj_A 19 EEVICPICLDILQK 32 (63)
T ss_dssp CCCBCTTTCSBCSS
T ss_pred cCCCCCcCCchhCC
Confidence 67999999986553
No 162
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=75.00 E-value=0.85 Score=26.02 Aligned_cols=21 Identities=33% Similarity=0.539 Sum_probs=16.5
Q ss_pred eeeCCCCCCCccH--hhhhhccc
Q 027247 48 EYPCPFCSEDFDL--VGLCCHID 68 (226)
Q Consensus 48 ~f~CPfC~e~~dv--~~L~~H~~ 68 (226)
.|.|++|+..|.. ..|..|..
T Consensus 9 ~~~C~~C~k~f~~~~~~L~~H~~ 31 (37)
T 2elp_A 9 AMKCPYCDFYFMKNGSDLQRHIW 31 (37)
T ss_dssp CEECSSSSCEECSSCHHHHHHHH
T ss_pred CeECCCCChhhccCHHHHHHHHH
Confidence 5999999997766 47878863
No 163
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=74.90 E-value=1.1 Score=26.84 Aligned_cols=33 Identities=27% Similarity=0.313 Sum_probs=20.7
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV 82 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPV 82 (226)
.|.|++|+..| ....|..|.. .|..+ +.-.|||
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-kp~~C~~ 45 (46)
T 2eor_A 12 PYNCEECGKAFIHDSQLQEHQR-IHTGE-KPSGPSS 45 (46)
T ss_dssp SEECTTTCCEESSHHHHHHHHH-HHHSC-CCSSSTT
T ss_pred CccCCCCCCCcCCHHHHHHHHH-hcCCC-CCCCCCC
Confidence 48888888854 4566777764 35433 4456664
No 164
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=74.84 E-value=1.2 Score=29.78 Aligned_cols=28 Identities=21% Similarity=0.599 Sum_probs=23.4
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCC
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEA 75 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~ 75 (226)
.|.|++|+..| ....|..|+...|..+.
T Consensus 45 ~~~C~~C~~~f~~~~~L~~H~~~~H~~~~ 73 (77)
T 2ct1_A 45 KFHCPHCDTVIARKSDLGVHLRKQHSYSG 73 (77)
T ss_dssp SEECSSSSCEESSHHHHHHHHHHTSCCSC
T ss_pred ccCCCCCCCccCCHHHHHHHHHHhCCCCC
Confidence 59999999955 67889999988887653
No 165
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=74.76 E-value=0.52 Score=30.24 Aligned_cols=40 Identities=25% Similarity=0.476 Sum_probs=23.8
Q ss_pred eeeCCCCCCCccH----hhh--hhcccccCCC---CCccccCCccccCc
Q 027247 48 EYPCPFCSEDFDL----VGL--CCHIDEEHPV---EAKSGVCPVCVTRV 87 (226)
Q Consensus 48 ~f~CPfC~e~~dv----~~L--~~H~~~eH~~---e~~~vvCPVC~~~v 87 (226)
...||.|.+++.. ..| |.|.-=.++. -.++..||+|...+
T Consensus 5 ~~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~~~~~~CP~Cr~~~ 53 (55)
T 1iym_A 5 GVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCRLTV 53 (55)
T ss_dssp SCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTTCCSCSSSCCCS
T ss_pred CCcCccCCccccCCCceEECCCCCCcccHHHHHHHHHcCCcCcCCCCEe
Confidence 4679999887654 233 6664322222 12356899997654
No 166
>1wir_A Protein arginine N-methyltransferase 3; C2H2 zinc finger domain, PRMT3, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.37.1.5
Probab=74.62 E-value=1.3 Score=34.84 Aligned_cols=32 Identities=25% Similarity=0.337 Sum_probs=27.4
Q ss_pred ceeeCCCCCC-CccHhhhhhcccccCCCCCccc
Q 027247 47 YEYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSG 78 (226)
Q Consensus 47 ~~f~CPfC~e-~~dv~~L~~H~~~eH~~e~~~v 78 (226)
..+.|=||.+ --++..+..||.+.|.++-..+
T Consensus 14 ~~~~CLFCd~~~~s~~~~l~H~k~~H~FD~~~i 46 (121)
T 1wir_A 14 QHTPCLFCDRLFASAEETFSHCKLEHQFNIDSM 46 (121)
T ss_dssp CCEECSSSCCEESSHHHHHHHHHHSSCCCHHHH
T ss_pred CceeEecCCCcccCHHHHHHHHHHhcCCCHHHH
Confidence 4699999999 6689999999999999976543
No 167
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=74.50 E-value=1.5 Score=26.38 Aligned_cols=33 Identities=24% Similarity=0.349 Sum_probs=20.9
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV 82 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPV 82 (226)
.|.|++|+..| ....|..|.. .|..+ +.-.|++
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~~~-k~~~C~~ 45 (46)
T 2en9_A 12 LFKCNECKKTFTQSSSLTVHQR-IHTGE-KPSGPSS 45 (46)
T ss_dssp CCBCTTTCCBCSSHHHHHHHHH-HHTSS-CCCSCCC
T ss_pred CEECCccCcccCCHHHHHHHHH-HcCCC-CCCCCCC
Confidence 58899998844 4566777864 45433 4456664
No 168
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=74.37 E-value=2.2 Score=25.54 Aligned_cols=33 Identities=27% Similarity=0.419 Sum_probs=21.4
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV 82 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPV 82 (226)
.|.|+.|+..| ....|..|. ..|..+ +.-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~-~~H~~~-k~~~C~~ 45 (46)
T 2em6_A 12 CYKCDVCGKEFSQSSHLQTHQ-RVHTGE-KPSGPSS 45 (46)
T ss_dssp CCBCSSSCCBCSSHHHHHHHH-TTTSSS-CCCCTTC
T ss_pred CeECCCCCcccCCHHHHHHHH-HHcCCC-CCCCCCC
Confidence 48899998855 456777886 345433 4456654
No 169
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=74.02 E-value=0.31 Score=32.91 Aligned_cols=42 Identities=21% Similarity=0.475 Sum_probs=23.6
Q ss_pred ceeeCCCCCCCccH----h-hhhhcccccCCCC---CccccCCccccCcc
Q 027247 47 YEYPCPFCSEDFDL----V-GLCCHIDEEHPVE---AKSGVCPVCVTRVT 88 (226)
Q Consensus 47 ~~f~CPfC~e~~dv----~-~L~~H~~~eH~~e---~~~vvCPVC~~~v~ 88 (226)
....||.|.+.|.. . --|.|.-=.++.. .+...||+|...+.
T Consensus 13 ~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~ 62 (69)
T 2kiz_A 13 TEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 62 (69)
T ss_dssp CCCSBTTTTBCCCSSSCEEECTTSCEEEHHHHHHHHHHCSBCTTTCSBSC
T ss_pred CCCCCeeCCccccCCCcEEEeCCCCHHHHHHHHHHHHcCCCCcCcCcccc
Confidence 56889999886642 1 2255542111211 12346999987654
No 170
>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}
Probab=73.79 E-value=0.95 Score=36.23 Aligned_cols=28 Identities=36% Similarity=0.917 Sum_probs=20.8
Q ss_pred ceeeCCCCCCCccHhhhhhcccccCCCCCccccCCccccCc
Q 027247 47 YEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRV 87 (226)
Q Consensus 47 ~~f~CPfC~e~~dv~~L~~H~~~eH~~e~~~vvCPVC~~~v 87 (226)
-.|.|+-||..|+.. .....||.|...+
T Consensus 131 ~~y~C~~Cg~~~~~~-------------~~~~~Cp~CG~~~ 158 (165)
T 2lcq_A 131 WRYVCIGCGRKFSTL-------------PPGGVCPDCGSKV 158 (165)
T ss_dssp CCEEESSSCCEESSC-------------CGGGBCTTTCCBE
T ss_pred EEEECCCCCCcccCC-------------CCCCcCCCCCCcc
Confidence 379999999977643 3346999996643
No 171
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=73.63 E-value=0.5 Score=32.56 Aligned_cols=43 Identities=28% Similarity=0.468 Sum_probs=25.4
Q ss_pred ceeeCCCCCCCccHhh--hhhcccccCCC---------CCccccCCccccCcch
Q 027247 47 YEYPCPFCSEDFDLVG--LCCHIDEEHPV---------EAKSGVCPVCVTRVTM 89 (226)
Q Consensus 47 ~~f~CPfC~e~~dv~~--L~~H~~~eH~~---------e~~~vvCPVC~~~v~~ 89 (226)
..+.||.|.+.+.... -|.|.-=..+. ......||+|...+..
T Consensus 18 ~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~ 71 (85)
T 2ecw_A 18 EEVTCPICLELLKEPVSADCNHSFCRACITLNYESNRNTDGKGNCPVCRVPYPF 71 (85)
T ss_dssp TTTSCTTTCSCCSSCEECTTSCCBCHHHHHHHHHHSBCTTSCBCCTTTCCCCCT
T ss_pred cCCCCcCCChhhCcceeCCCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCcCCH
Confidence 5689999998655432 24443211111 1236789999887653
No 172
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=73.53 E-value=1.6 Score=26.27 Aligned_cols=33 Identities=27% Similarity=0.477 Sum_probs=20.2
Q ss_pred eeeCCCCCCCcc-HhhhhhcccccCCCCCccccCCc
Q 027247 48 EYPCPFCSEDFD-LVGLCCHIDEEHPVEAKSGVCPV 82 (226)
Q Consensus 48 ~f~CPfC~e~~d-v~~L~~H~~~eH~~e~~~vvCPV 82 (226)
.|.|++|+..|. ...|..|.. .|.. .+.-.||+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~ 45 (46)
T 2em4_A 12 PYECIECGKAFKTKSSLICHRR-SHTG-EKPSGPSS 45 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHH-HHSS-SSCCCCCC
T ss_pred CcCCCCCCCccCCHHHHHHHHH-hcCC-CCCCCCCC
Confidence 488888888444 466777764 3543 34456654
No 173
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=73.37 E-value=0.45 Score=33.25 Aligned_cols=42 Identities=19% Similarity=0.333 Sum_probs=24.6
Q ss_pred ceeeCCCCCCCccHhh--hhhcccccCCCC---CccccCCccccCcc
Q 027247 47 YEYPCPFCSEDFDLVG--LCCHIDEEHPVE---AKSGVCPVCVTRVT 88 (226)
Q Consensus 47 ~~f~CPfC~e~~dv~~--L~~H~~~eH~~e---~~~vvCPVC~~~v~ 88 (226)
..+.||.|.+.+.... -|-|.-=..+.. .+...||+|...+.
T Consensus 14 ~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~ 60 (81)
T 2csy_A 14 IPFRCFICRQAFQNPVVTKCRHYFCESCALEHFRATPRCYICDQPTG 60 (81)
T ss_dssp CCSBCSSSCSBCCSEEECTTSCEEEHHHHHHHHHHCSBCSSSCCBCC
T ss_pred CCCCCcCCCchhcCeeEccCCCHhHHHHHHHHHHCCCcCCCcCcccc
Confidence 5799999999654432 244432111111 12457999988765
No 174
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=73.20 E-value=2.6 Score=25.21 Aligned_cols=34 Identities=21% Similarity=0.228 Sum_probs=24.8
Q ss_pred eeeCC--CCCCCc-cHhhhhhcccccCCCCCccccCCcc
Q 027247 48 EYPCP--FCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVC 83 (226)
Q Consensus 48 ~f~CP--fC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC 83 (226)
.|.|+ .|+..| ....|..|.. .|.. .+.-.|++|
T Consensus 12 ~~~C~~~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~C 48 (48)
T 2ent_A 12 PFACTWPGCGWRFSRSDELSRHRR-SHSG-VKPSGPSSG 48 (48)
T ss_dssp CEECCSSSCCCEESSHHHHHHHHT-TSCC-CCSCSSCCC
T ss_pred CeECCCCCCCCccCCHHHHHHHHH-HhCC-CCCCCCCCC
Confidence 59997 899944 5678888975 4554 356789888
No 175
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=73.17 E-value=1.4 Score=31.41 Aligned_cols=43 Identities=21% Similarity=0.461 Sum_probs=26.1
Q ss_pred ceeeCCCCCCCccHh---hh---hhcccccCC----CCCccccCCccccCcch
Q 027247 47 YEYPCPFCSEDFDLV---GL---CCHIDEEHP----VEAKSGVCPVCVTRVTM 89 (226)
Q Consensus 47 ~~f~CPfC~e~~dv~---~L---~~H~~~eH~----~e~~~vvCPVC~~~v~~ 89 (226)
..+.||.|-+.++.. .+ |-|.-=..+ .+..+..||+|...+..
T Consensus 10 ~~~~CpICle~~~~~d~~~~p~~CGH~fC~~Cl~~~~~~~~~~CP~CR~~~~~ 62 (78)
T 1e4u_A 10 DPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPYPE 62 (78)
T ss_dssp CCCBCTTTCCBCCTTTTTCCSSTTSCCCCHHHHHHHTTSSCSBCTTTCCBCSS
T ss_pred cCCcCCccCccCccccccccccCCCCCcCHHHHHHHHhcCCCCCCCCCCccCC
Confidence 458899999977543 22 555321111 12346789999876653
No 176
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=72.13 E-value=1.7 Score=25.96 Aligned_cols=33 Identities=30% Similarity=0.499 Sum_probs=21.6
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV 82 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPV 82 (226)
.|.|++|+..| ....|..|.. .|..+ +.-.||+
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~~~-k~~~C~~ 45 (45)
T 2epu_A 12 PFECTHCGKSFRAKGNLVTHQR-IHTGE-KSGPSSG 45 (45)
T ss_dssp SEEETTTTEEESSHHHHHHHHT-TTSSC-CCCCSCC
T ss_pred CccCCCCCCccCChHHHHHHHH-HhCCC-CCCCCCC
Confidence 58999999854 4566778864 45543 4456664
No 177
>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}
Probab=71.62 E-value=1.1 Score=33.79 Aligned_cols=23 Identities=17% Similarity=0.280 Sum_probs=18.6
Q ss_pred eeeCCCCCCCccHhhhhhccccc
Q 027247 48 EYPCPFCSEDFDLVGLCCHIDEE 70 (226)
Q Consensus 48 ~f~CPfC~e~~dv~~L~~H~~~e 70 (226)
--+||.||+-+|-.+|..-+-.-
T Consensus 8 ~~~~PlCG~~L~W~eLIeQML~~ 30 (95)
T 2k5c_A 8 MAKCPICGSPLKWEELIEEMLII 30 (95)
T ss_dssp CEECSSSCCEECHHHHHHHSTTC
T ss_pred cccCCcCCCccCHHHHHHHHHhh
Confidence 35899999999999998765443
No 178
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=71.57 E-value=1.4 Score=23.15 Aligned_cols=20 Identities=35% Similarity=0.698 Sum_probs=13.2
Q ss_pred eeCCCCCCCc-cHhhhhhccc
Q 027247 49 YPCPFCSEDF-DLVGLCCHID 68 (226)
Q Consensus 49 f~CPfC~e~~-dv~~L~~H~~ 68 (226)
|.|+.|+..| ....|..|..
T Consensus 3 ~~C~~C~k~f~~~~~l~~H~~ 23 (30)
T 1klr_A 3 YQCQYCEFRSADSSNLKTHIK 23 (30)
T ss_dssp CCCSSSSCCCSCSHHHHHHHH
T ss_pred ccCCCCCCccCCHHHHHHHHH
Confidence 7788888755 3456666654
No 179
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=71.49 E-value=2.1 Score=25.12 Aligned_cols=24 Identities=29% Similarity=0.602 Sum_probs=15.1
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCC
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHP 72 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~ 72 (226)
.|.|++|+..| ....|..|.. .|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~ 36 (44)
T 2eof_A 12 PYECNECQKAFNTKSNLMVHQR-THT 36 (44)
T ss_dssp SEECTTTCCEESCHHHHHHHHH-HTT
T ss_pred CeECCCCCcccCCHhHHHHHHH-HhC
Confidence 47888888843 4566677763 344
No 180
>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}
Probab=71.39 E-value=2.9 Score=28.50 Aligned_cols=46 Identities=30% Similarity=0.491 Sum_probs=33.0
Q ss_pred CCCCc-cHhhhhhcccccCCCCC-----ccccCC--ccccC--cchhhHhhhhhcc
Q 027247 54 CSEDF-DLVGLCCHIDEEHPVEA-----KSGVCP--VCVTR--VTMDMVDHITTQH 99 (226)
Q Consensus 54 C~e~~-dv~~L~~H~~~eH~~e~-----~~vvCP--VC~~~--v~~d~i~Hl~~qH 99 (226)
|++.| +...|+.|+..+|-... .+.+|. -|... ....|+.||+..|
T Consensus 9 C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H 64 (64)
T 1zw8_A 9 CPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH 64 (64)
T ss_dssp CCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred CCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence 88854 45679999999997644 356776 67553 2357999998776
No 181
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=71.37 E-value=1.3 Score=28.40 Aligned_cols=14 Identities=29% Similarity=0.539 Sum_probs=10.9
Q ss_pred ceeeCCCCCCCccH
Q 027247 47 YEYPCPFCSEDFDL 60 (226)
Q Consensus 47 ~~f~CPfC~e~~dv 60 (226)
..+.||.|.+.+..
T Consensus 14 ~~~~C~IC~~~~~~ 27 (58)
T 2ecj_A 14 VEASCSVCLEYLKE 27 (58)
T ss_dssp CCCBCSSSCCBCSS
T ss_pred cCCCCccCCcccCc
Confidence 56899999986554
No 182
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=71.29 E-value=1.6 Score=28.93 Aligned_cols=38 Identities=21% Similarity=0.425 Sum_probs=28.3
Q ss_pred ceeeCCC--CCCCc-cHhhhhhcccccCCCCCccccCCccccC
Q 027247 47 YEYPCPF--CSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTR 86 (226)
Q Consensus 47 ~~f~CPf--C~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC~~~ 86 (226)
..|.|++ |+..| ....|..|+. .|.. .+.-.|++|...
T Consensus 37 ~~~~C~~~~C~k~f~~~~~L~~H~~-~H~~-~~~~~C~~C~k~ 77 (79)
T 2dlk_A 37 KSFSCPEPACGKSFNFKKHLKEHMK-LHSD-TRDYICEFSGPS 77 (79)
T ss_dssp CCEECSCTTTCCEESSHHHHHHHHH-HHHT-SCCCSCCSSSCC
T ss_pred CCeECCCCCCcCccCCHHHHHHHHH-HhCC-CCCeeCCCCCCC
Confidence 3599999 99944 5788999986 4543 356789999653
No 183
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=70.98 E-value=1.2 Score=26.73 Aligned_cols=33 Identities=21% Similarity=0.304 Sum_probs=19.6
Q ss_pred eeeCCCCCCC-ccHhhhhhcccccCCCCCccccCCc
Q 027247 48 EYPCPFCSED-FDLVGLCCHIDEEHPVEAKSGVCPV 82 (226)
Q Consensus 48 ~f~CPfC~e~-~dv~~L~~H~~~eH~~e~~~vvCPV 82 (226)
.|.|++|+.. -....|..|.. .|..+ +.-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-~~~~C~~ 45 (46)
T 2eoz_A 12 PYSCNVCGKAFVLSAHLNQHLR-VHTQE-TLSGPSS 45 (46)
T ss_dssp SEEETTTTEEESSHHHHHHHHH-HHSSC-CSSSCCC
T ss_pred CeECcccChhhCCHHHHHHHHH-HhCCC-CCCCCCC
Confidence 4888888884 44566777764 34332 3445653
No 184
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=70.85 E-value=1.8 Score=22.64 Aligned_cols=20 Identities=25% Similarity=0.491 Sum_probs=14.1
Q ss_pred eeeCCCCCCCc-cHhhhhhcc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHI 67 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~ 67 (226)
.|.|+.|+..| ....|..|.
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H~ 22 (29)
T 2m0f_A 2 PLKCRECGKQFTTSGNLKRHL 22 (29)
T ss_dssp CEECTTTSCEESCHHHHHHHH
T ss_pred CccCCCCCCccCChhHHHHHH
Confidence 37888888855 456677775
No 185
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=70.43 E-value=3 Score=24.45 Aligned_cols=24 Identities=29% Similarity=0.533 Sum_probs=15.3
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCC
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHP 72 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~ 72 (226)
.|.|++|+..| ....|..|.. .|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~ 36 (44)
T 2en7_A 12 PYVCNECGKAFRSKSYLIIHTR-THT 36 (44)
T ss_dssp SSCCTTTCCCCSSHHHHHHHHT-TTC
T ss_pred CeECCCCCCccCCHHHHHHHhh-hcC
Confidence 47888888844 4456777763 354
No 186
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=70.36 E-value=1.8 Score=26.75 Aligned_cols=29 Identities=28% Similarity=0.689 Sum_probs=16.0
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAK 76 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~ 76 (226)
-|.|++|+..| ....|..|+...|..+..
T Consensus 7 p~~C~~C~k~F~~~~~L~~H~~~~H~~e~~ 36 (48)
T 3iuf_A 7 PYACDICGKRYKNRPGLSYHYAHSHLAEEE 36 (48)
T ss_dssp CEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred CEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence 47777777744 455666676435554443
No 187
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=70.35 E-value=1.2 Score=40.44 Aligned_cols=35 Identities=23% Similarity=0.462 Sum_probs=23.3
Q ss_pred cceeeCCCCCCCccHhhhhhcccccCCCCCccccCCccc-cCcchhhHh
Q 027247 46 EYEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCV-TRVTMDMVD 93 (226)
Q Consensus 46 ~~~f~CPfC~e~~dv~~L~~H~~~eH~~e~~~vvCPVC~-~~v~~d~i~ 93 (226)
.+...|||||.-+.. +-+.-+||||- ..||.+.+|
T Consensus 276 ~~~v~Cp~cgA~y~~-------------~~kG~lC~vC~l~~IG~~~~G 311 (320)
T 3mkr_B 276 KPVEKCPLSGACYSP-------------EFKGQICKVTTVTEIGKDVIG 311 (320)
T ss_dssp SCCEECTTTCCEECG-------------GGTTSBCTTTSSBBSSCCCCC
T ss_pred CCCccCCCCCCeech-------------hhCCCCCCCCcCcccCCcccC
Confidence 356799999974421 22456999994 467776654
No 188
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=70.21 E-value=2.2 Score=25.37 Aligned_cols=33 Identities=24% Similarity=0.314 Sum_probs=20.8
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPV 82 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPV 82 (226)
.|.|+.|+..| ....|..|.. .|.. .+.-.|+|
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~ 43 (43)
T 2yrm_A 10 AFFCNECDCRFSEEASLKRHTL-QTHS-DKSGPSSG 43 (43)
T ss_dssp CBCCSSSCCCBSSHHHHHHHHH-HHTC-TTCSSSCC
T ss_pred CEECCCCCCeeCChHHHHHHHH-hhCC-CCCccCCC
Confidence 48899998854 4566777864 3443 23456654
No 189
>2l7x_A Envelope glycoprotein; cytoplasmic tail, viral protein; NMR {Crimean-congo hemorrhagic fever virus}
Probab=70.11 E-value=1.6 Score=31.88 Aligned_cols=22 Identities=32% Similarity=0.812 Sum_probs=14.5
Q ss_pred CccccCCccccCcc-hhhHhhhh
Q 027247 75 AKSGVCPVCVTRVT-MDMVDHIT 96 (226)
Q Consensus 75 ~~~vvCPVC~~~v~-~d~i~Hl~ 96 (226)
-..-+||-|+.++. .-+++|.+
T Consensus 28 Cs~NiCPYC~nRls~eGl~RHV~ 50 (77)
T 2l7x_A 28 CSYNICPYCASRLTSDGLARHVT 50 (77)
T ss_dssp HTTTCCTTTCCCCCTTTHHHHHT
T ss_pred CCcccChhhhccCCccchhhhcc
Confidence 34457888887765 45777763
No 190
>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}
Probab=69.93 E-value=3 Score=28.75 Aligned_cols=47 Identities=19% Similarity=0.409 Sum_probs=34.3
Q ss_pred ceeeCC-CCCCCccHhhhhhcccccCCCCCccccCCccccCcc-hhhHhhh
Q 027247 47 YEYPCP-FCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT-MDMVDHI 95 (226)
Q Consensus 47 ~~f~CP-fC~e~~dv~~L~~H~~~eH~~e~~~vvCPVC~~~v~-~d~i~Hl 95 (226)
...+|| .|+..+-...|-.|+..+ -..+.+.|+-|...+. .++..|.
T Consensus 15 ~~v~C~~~C~~~v~r~~l~~H~~~~--C~~r~v~C~~C~~~~~~~~l~~H~ 63 (76)
T 2yuc_A 15 NVIPCPNRCPMKLSRRDLPAHLQHD--CPKRRLKCEFCGCDFSGEAYESHE 63 (76)
T ss_dssp SCCBCTTCCSCBCCSSSSTTTTTTS--CTTSCCCCSSSCCCCCHHHHHHTT
T ss_pred cccCCCccccHHhhHhHHHhhCHhh--CCCcceECCCCCCccCHHHHHHHH
Confidence 357895 799988888888887532 2346789999977654 5777776
No 191
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=69.75 E-value=2.1 Score=22.36 Aligned_cols=20 Identities=25% Similarity=0.556 Sum_probs=13.9
Q ss_pred eeCCCCCCCc-cHhhhhhccc
Q 027247 49 YPCPFCSEDF-DLVGLCCHID 68 (226)
Q Consensus 49 f~CPfC~e~~-dv~~L~~H~~ 68 (226)
|.|+.|+..| ....|..|..
T Consensus 3 ~~C~~C~~~f~~~~~l~~H~~ 23 (29)
T 1ard_A 3 FVCEVCTRAFARQEHLKRHYR 23 (29)
T ss_dssp CBCTTTCCBCSSHHHHHHHHH
T ss_pred eECCCCCcccCCHHHHHHHHH
Confidence 7888898855 4456666753
No 192
>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A
Probab=69.58 E-value=1.4 Score=27.70 Aligned_cols=25 Identities=32% Similarity=0.577 Sum_probs=22.2
Q ss_pred eeCCCCCC-CccHhhhhhcccccCCC
Q 027247 49 YPCPFCSE-DFDLVGLCCHIDEEHPV 73 (226)
Q Consensus 49 f~CPfC~e-~~dv~~L~~H~~~eH~~ 73 (226)
--|-||-+ .-|+.-|..|+.+.|..
T Consensus 10 qhcrfckkkysdvknlikhire~hd~ 35 (37)
T 2elu_A 10 QHCRFCKKKYSDVKNLIKHIRDAHDP 35 (37)
T ss_dssp CEETTTTEECSSHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 46999999 88999999999999864
No 193
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=69.10 E-value=3 Score=21.52 Aligned_cols=20 Identities=30% Similarity=0.649 Sum_probs=13.8
Q ss_pred eeCCCCCCCcc-Hhhhhhccc
Q 027247 49 YPCPFCSEDFD-LVGLCCHID 68 (226)
Q Consensus 49 f~CPfC~e~~d-v~~L~~H~~ 68 (226)
|.|+.|+..|. ...|..|..
T Consensus 2 ~~C~~C~k~f~~~~~l~~H~~ 22 (27)
T 1znf_A 2 YKCGLCERSFVEKSALSRHQR 22 (27)
T ss_dssp CBCSSSCCBCSSHHHHHHHGG
T ss_pred ccCCCCCCcCCCHHHHHHHHH
Confidence 77888888554 466777753
No 194
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=69.08 E-value=2.3 Score=25.59 Aligned_cols=32 Identities=22% Similarity=0.228 Sum_probs=19.5
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCC
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCP 81 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCP 81 (226)
.|.|++|+..| ....|..|.. .|..+ +.-.|.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~~~-k~~~C~ 44 (46)
T 2eom_A 12 GHRCSDCGKFFLQASNFIQHRR-IHTGE-KPSGPS 44 (46)
T ss_dssp SCCCSSSCCCCSSHHHHHHHHH-HHSSC-CCSSCC
T ss_pred CcCCCCCCCeeCChHHHHHHHH-HhCCC-CCCCCC
Confidence 48888888855 4566777764 35433 344554
No 195
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=69.00 E-value=3.5 Score=24.62 Aligned_cols=32 Identities=28% Similarity=0.456 Sum_probs=19.1
Q ss_pred eeeCCCCCCCcc-HhhhhhcccccCCCCCccccCC
Q 027247 48 EYPCPFCSEDFD-LVGLCCHIDEEHPVEAKSGVCP 81 (226)
Q Consensus 48 ~f~CPfC~e~~d-v~~L~~H~~~eH~~e~~~vvCP 81 (226)
.|.|++|+..|. ...|..|.. .|..+ +.-.|+
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~~~-k~~~C~ 44 (46)
T 2enh_A 12 PYECDVCRKAFSHHASLTQHQR-VHSGE-KPSGPS 44 (46)
T ss_dssp SCBCTTTCCBCSSSHHHHHHGG-GSCCS-CCCCCC
T ss_pred CcCCCCcCchhCCHHHHHHHHH-HhCCC-CCCCCC
Confidence 488888888554 456777764 35432 344554
No 196
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=68.75 E-value=2 Score=24.12 Aligned_cols=22 Identities=23% Similarity=0.555 Sum_probs=16.3
Q ss_pred ceeeCCCCCCCc-cHhhhhhccc
Q 027247 47 YEYPCPFCSEDF-DLVGLCCHID 68 (226)
Q Consensus 47 ~~f~CPfC~e~~-dv~~L~~H~~ 68 (226)
..|.|++|+..| ....|..|..
T Consensus 8 k~~~C~~C~k~f~~~~~l~~H~~ 30 (36)
T 2els_A 8 KIFTCEYCNKVFKFKHSLQAHLR 30 (36)
T ss_dssp CCEECTTTCCEESSHHHHHHHHH
T ss_pred CCEECCCCCceeCCHHHHHHHHH
Confidence 359999999955 4566777764
No 197
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=68.59 E-value=1.2 Score=33.32 Aligned_cols=42 Identities=31% Similarity=0.441 Sum_probs=26.7
Q ss_pred ceeeCCCCCCCc-cHhhh--hhcccccCCCCCcc-ccCCccccCcc
Q 027247 47 YEYPCPFCSEDF-DLVGL--CCHIDEEHPVEAKS-GVCPVCVTRVT 88 (226)
Q Consensus 47 ~~f~CPfC~e~~-dv~~L--~~H~~~eH~~e~~~-vvCPVC~~~v~ 88 (226)
..+.||.|.+.| +...| |-|.-=..+..... ..||+|...+.
T Consensus 21 ~~~~C~IC~~~~~~pv~~~~CgH~fC~~Ci~~~~~~~CP~Cr~~~~ 66 (117)
T 1jm7_B 21 KLLRCSRCTNILREPVCLGGCEHIFCSNCVSDCIGTGCPVCYTPAW 66 (117)
T ss_dssp HTTSCSSSCSCCSSCBCCCSSSCCBCTTTGGGGTTTBCSSSCCBCS
T ss_pred hCCCCCCCChHhhCccEeCCCCCHHHHHHHHHHhcCCCcCCCCcCc
Confidence 579999999954 44444 66654444432221 57999987654
No 198
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=68.43 E-value=0.82 Score=31.56 Aligned_cols=40 Identities=20% Similarity=0.463 Sum_probs=23.4
Q ss_pred ceeeCCCCCCCccHhh-h--hhcccccCCC-----CCccccCCccccC
Q 027247 47 YEYPCPFCSEDFDLVG-L--CCHIDEEHPV-----EAKSGVCPVCVTR 86 (226)
Q Consensus 47 ~~f~CPfC~e~~dv~~-L--~~H~~~eH~~-----e~~~vvCPVC~~~ 86 (226)
..+.||.|.+.|.... | |-|.-=..+. ......||+|...
T Consensus 14 ~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~ 61 (74)
T 2yur_A 14 DELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCHQN 61 (74)
T ss_dssp GGGSCSSSCCCCTTCEECSSSCCEECTTHHHHHHHHSSSSCCSSSCCS
T ss_pred CCCCCcCCChHHhCCeEcCCCCCHHHHHHHHHHHHhcCCCcCCCCCCc
Confidence 6799999999555432 2 4453222222 1123589999775
No 199
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=68.33 E-value=3.1 Score=27.83 Aligned_cols=37 Identities=14% Similarity=0.188 Sum_probs=27.6
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCccccC
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTR 86 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC~~~ 86 (226)
.|.|++|+..| ....|..|+...|. .+...|++|...
T Consensus 47 ~~~C~~C~~~f~~~~~L~~H~~~h~~--~~~~~~~~~~~~ 84 (86)
T 1x6h_A 47 AFVCSKCGKTFTRRNTMARHADNCAG--PDGVEGENSGPS 84 (86)
T ss_dssp CEECSSSCCEESCHHHHHHHHHHCCC--CCSCCCCCCCCC
T ss_pred ceECCCCCChhCCHHHHHHHHHHccC--CCCcccCCCCCC
Confidence 59999999955 67889999865543 345678888653
No 200
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=68.31 E-value=1.4 Score=40.12 Aligned_cols=36 Identities=6% Similarity=0.171 Sum_probs=23.2
Q ss_pred CcceeeCCCCCCCccHhhhhhcccccCCCCCccccCCccc-cCcchhhHh
Q 027247 45 GEYEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCV-TRVTMDMVD 93 (226)
Q Consensus 45 ~~~~f~CPfC~e~~dv~~L~~H~~~eH~~e~~~vvCPVC~-~~v~~d~i~ 93 (226)
|.+...|||||.-+.. +-+.-+||||- ..||.+.+|
T Consensus 284 g~~~v~Cp~cgA~y~~-------------~~kG~lC~vC~l~~IG~~a~G 320 (325)
T 3mv2_A 284 DTPSVSDPLTGSKYVI-------------TEKDKIDRIAMISKIGAPASG 320 (325)
T ss_dssp SSCEEECTTTCCEEEG-------------GGTTSBCSSSSCBBTTCCCCC
T ss_pred CCCCccCCCCCCeech-------------hhCCCCCCCCcCcccCCCccc
Confidence 3467899999974422 22356999994 467665543
No 201
>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A
Probab=68.09 E-value=1.8 Score=35.84 Aligned_cols=26 Identities=19% Similarity=0.580 Sum_probs=18.1
Q ss_pred ceeeCCCCCCCccHhhhhhcccccCCCCCccccCCcccc
Q 027247 47 YEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVT 85 (226)
Q Consensus 47 ~~f~CPfC~e~~dv~~L~~H~~~eH~~e~~~vvCPVC~~ 85 (226)
..|.|+.||--++-. + -+-+||+|..
T Consensus 154 ~~~~C~~CG~~~~g~--------~-----~p~~CP~C~~ 179 (191)
T 1lko_A 154 TKWRCRNCGYVHEGT--------G-----APELCPACAH 179 (191)
T ss_dssp EEEEETTTCCEEEEE--------E-----CCSBCTTTCC
T ss_pred ceEEECCCCCEeeCC--------C-----CCCCCCCCcC
Confidence 479999999865511 1 1229999976
No 202
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=67.78 E-value=1.9 Score=22.38 Aligned_cols=19 Identities=32% Similarity=0.850 Sum_probs=12.8
Q ss_pred eeCCCCCCCcc-Hhhhhhcc
Q 027247 49 YPCPFCSEDFD-LVGLCCHI 67 (226)
Q Consensus 49 f~CPfC~e~~d-v~~L~~H~ 67 (226)
|.|+.|+..|. ...|..|.
T Consensus 3 ~~C~~C~~~f~~~~~l~~H~ 22 (29)
T 2m0e_A 3 HKCPHCDKKFNQVGNLKAHL 22 (29)
T ss_dssp CCCSSCCCCCCTTTHHHHHH
T ss_pred CcCCCCCcccCCHHHHHHHH
Confidence 77888888553 45566665
No 203
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=67.65 E-value=3 Score=24.93 Aligned_cols=32 Identities=28% Similarity=0.413 Sum_probs=18.6
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCC
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCP 81 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCP 81 (226)
.|.|++|+..| ....|..|.. .|..+ +.-.||
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-k~~~C~ 44 (46)
T 2eoh_A 12 PYECKECRKTFIQIGHLNQHKR-VHTGE-RSSGPS 44 (46)
T ss_dssp SCCCSSSCCCCSSHHHHHHHHH-HCSSC-CSCSTT
T ss_pred CcCCCCcCchhCCHHHHHHHHH-HhCCC-CCCCCC
Confidence 47888888844 3466777753 35432 334454
No 204
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=67.62 E-value=1.2 Score=30.75 Aligned_cols=41 Identities=27% Similarity=0.460 Sum_probs=24.8
Q ss_pred ceeeCCCCCC-CccHhhh-hhcc-cccCCCCCccccCCccccCcc
Q 027247 47 YEYPCPFCSE-DFDLVGL-CCHI-DEEHPVEAKSGVCPVCVTRVT 88 (226)
Q Consensus 47 ~~f~CPfC~e-~~dv~~L-~~H~-~~eH~~e~~~vvCPVC~~~v~ 88 (226)
....|+.|.+ .-++..| |.|. -=..+.. +...||+|...+.
T Consensus 14 ~~~~C~IC~~~~~~~v~~pCgH~~~C~~C~~-~~~~CP~CR~~i~ 57 (68)
T 2ea5_A 14 NSKDCVVCQNGTVNWVLLPCRHTCLCDGCVK-YFQQCPMCRQFVQ 57 (68)
T ss_dssp CSSCCSSSSSSCCCCEETTTTBCCSCTTHHH-HCSSCTTTCCCCC
T ss_pred CCCCCCCcCcCCCCEEEECCCChhhhHHHHh-cCCCCCCCCcchh
Confidence 3578999998 5554443 5554 2222222 3468999987664
No 205
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=67.22 E-value=2.8 Score=34.85 Aligned_cols=36 Identities=17% Similarity=0.087 Sum_probs=23.1
Q ss_pred ceeeCCCCCC------------CccHhhhhhcccccCCCCCccccCCccccCcc
Q 027247 47 YEYPCPFCSE------------DFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT 88 (226)
Q Consensus 47 ~~f~CPfC~e------------~~dv~~L~~H~~~eH~~e~~~vvCPVC~~~v~ 88 (226)
..|.||.|.+ -|+...+..|+...+ ..||+|...+.
T Consensus 105 ~~f~CPI~~elm~DPV~~~~Ghtfer~~I~~~l~~~~------~tcP~t~~~l~ 152 (179)
T 2f42_A 105 DYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVG------HFDPVTRSPLT 152 (179)
T ss_dssp GGGBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHTC------SBCTTTCCBCC
T ss_pred HhhcccCccccCCCCeECCCCCEECHHHHHHHHHhCC------CCCCCCcCCCC
Confidence 6799999765 344555555554321 26999988664
No 206
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=67.11 E-value=2.2 Score=22.28 Aligned_cols=20 Identities=15% Similarity=0.649 Sum_probs=14.6
Q ss_pred eeeCCCCCCCcc-Hhhhhhcc
Q 027247 48 EYPCPFCSEDFD-LVGLCCHI 67 (226)
Q Consensus 48 ~f~CPfC~e~~d-v~~L~~H~ 67 (226)
.|.|+.|+..|. ...|..|.
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~ 23 (27)
T 2kvh_A 3 PFSCSLCPQRSRDFSAMTKHL 23 (27)
T ss_dssp CEECSSSSCEESSHHHHHHHH
T ss_pred CccCCCcChhhCCHHHHHHHH
Confidence 489999999554 56677775
No 207
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=67.01 E-value=2.5 Score=22.06 Aligned_cols=21 Identities=29% Similarity=0.823 Sum_probs=15.9
Q ss_pred eeeCCCCCCCc-cHhhhhhccc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHID 68 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~ 68 (226)
.|.|+.|+..| ....|..|..
T Consensus 3 ~~~C~~C~~~f~~~~~l~~H~~ 24 (30)
T 2m0d_A 3 PYQCDYCGRSFSDPTSKMRHLE 24 (30)
T ss_dssp CEECTTTCCEESCHHHHHHHHH
T ss_pred CccCCCCCcccCCHHHHHHHHH
Confidence 58999999955 4667888864
No 208
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=66.98 E-value=2.8 Score=27.92 Aligned_cols=30 Identities=27% Similarity=0.695 Sum_probs=24.1
Q ss_pred ceeeCCCCCCCc-cHhhhhhcccccCCCCCc
Q 027247 47 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAK 76 (226)
Q Consensus 47 ~~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~ 76 (226)
..|.|++|+..| ....|..|+...|..+..
T Consensus 37 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~ 67 (78)
T 2d9h_A 37 LRFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67 (78)
T ss_dssp CCEECTTTCCEESSHHHHHHHHHHTSTTTSS
T ss_pred cccCCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence 359999999955 577899999888886543
No 209
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=66.94 E-value=0.56 Score=35.49 Aligned_cols=42 Identities=21% Similarity=0.357 Sum_probs=24.6
Q ss_pred ceeeCCCCCCCccHh--hhhhcccccCCC----CCccccCCccccCcc
Q 027247 47 YEYPCPFCSEDFDLV--GLCCHIDEEHPV----EAKSGVCPVCVTRVT 88 (226)
Q Consensus 47 ~~f~CPfC~e~~dv~--~L~~H~~~eH~~----e~~~vvCPVC~~~v~ 88 (226)
..+.||.|.+.|... --|-|.--..+. ......||+|...+.
T Consensus 51 ~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~ 98 (124)
T 3fl2_A 51 ETFQCICCQELVFRPITTVCQHNVCKDCLDRSFRAQVFSCPACRYDLG 98 (124)
T ss_dssp HHTBCTTTSSBCSSEEECTTSCEEEHHHHHHHHHTTCCBCTTTCCBCC
T ss_pred cCCCCCcCChHHcCcEEeeCCCcccHHHHHHHHhHCcCCCCCCCccCC
Confidence 569999999955532 234443211111 234458999987664
No 210
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=65.94 E-value=1.3 Score=30.39 Aligned_cols=43 Identities=26% Similarity=0.394 Sum_probs=25.5
Q ss_pred ceeeCCCCCCCccHhh--hhhcccccCCCC---------CccccCCccccCcch
Q 027247 47 YEYPCPFCSEDFDLVG--LCCHIDEEHPVE---------AKSGVCPVCVTRVTM 89 (226)
Q Consensus 47 ~~f~CPfC~e~~dv~~--L~~H~~~eH~~e---------~~~vvCPVC~~~v~~ 89 (226)
..+.||.|.+.+.... -|.|.-=..+.. .....||+|...+..
T Consensus 18 ~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~ 71 (85)
T 2ecv_A 18 EEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQP 71 (85)
T ss_dssp CCCCCTTTCSCCSSCBCCSSSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCSSCS
T ss_pred CCCCCCCCCcccCCceeCCCCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCccCH
Confidence 6799999999654322 244432222221 235789999877653
No 211
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=65.85 E-value=3.1 Score=23.37 Aligned_cols=21 Identities=29% Similarity=0.637 Sum_probs=15.7
Q ss_pred eeeCCCCCCCcc-Hhhhhhccc
Q 027247 48 EYPCPFCSEDFD-LVGLCCHID 68 (226)
Q Consensus 48 ~f~CPfC~e~~d-v~~L~~H~~ 68 (226)
.|.|++|+..|. ...|..|..
T Consensus 11 ~~~C~~C~k~f~~~~~l~~H~~ 32 (37)
T 1p7a_A 11 PFQCPDCDRSFSRSDHLALHRK 32 (37)
T ss_dssp SBCCTTTCCCBSSHHHHHHHHG
T ss_pred CccCCCCCcccCcHHHHHHHHH
Confidence 599999999554 567777753
No 212
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=65.72 E-value=1.8 Score=26.85 Aligned_cols=24 Identities=29% Similarity=0.693 Sum_probs=19.1
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccC
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEH 71 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH 71 (226)
.|.||+|+..| ....|..|+...|
T Consensus 32 ~~~C~~C~~~f~~~~~l~~H~~~hh 56 (57)
T 3uk3_C 32 PYKCEFCEYAAAQKTSLRYHLERHH 56 (57)
T ss_dssp CEECSSSSCEESSHHHHHHHHHHHC
T ss_pred CcCCCCCcchhCCHHHHHHHHHHhc
Confidence 59999999955 6778888986655
No 213
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=65.35 E-value=2.3 Score=22.31 Aligned_cols=20 Identities=35% Similarity=0.695 Sum_probs=13.8
Q ss_pred eeCCCCCCCc-cHhhhhhccc
Q 027247 49 YPCPFCSEDF-DLVGLCCHID 68 (226)
Q Consensus 49 f~CPfC~e~~-dv~~L~~H~~ 68 (226)
|.|+.|+..| ....|..|..
T Consensus 3 ~~C~~C~k~f~~~~~l~~H~~ 23 (29)
T 1rik_A 3 FACPECPKRFMRSDHLTLHIL 23 (29)
T ss_dssp EECSSSSCEESCSHHHHHHHT
T ss_pred ccCCCCCchhCCHHHHHHHHH
Confidence 7888888854 4456667753
No 214
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=64.86 E-value=2.7 Score=25.14 Aligned_cols=21 Identities=33% Similarity=0.694 Sum_probs=13.6
Q ss_pred eeeCCCCCCCc-cHhhhhhccc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHID 68 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~ 68 (226)
.|.|++|+..| ....|..|..
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2yto_A 12 PYKCSDCGKAFTRKSGLHIHQQ 33 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHH
T ss_pred CEECcccCCccCCHhHHHHHHH
Confidence 47788887744 4466667753
No 215
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=64.57 E-value=1.5 Score=29.76 Aligned_cols=46 Identities=17% Similarity=0.275 Sum_probs=27.7
Q ss_pred ceeeCCCCCCCccHh-h-hhhcccccCCC---CCccccCCccccCcchhhH
Q 027247 47 YEYPCPFCSEDFDLV-G-LCCHIDEEHPV---EAKSGVCPVCVTRVTMDMV 92 (226)
Q Consensus 47 ~~f~CPfC~e~~dv~-~-L~~H~~~eH~~---e~~~vvCPVC~~~v~~d~i 92 (226)
..+.||.|.+.+... . -|.|.-=..+. -.....||+|...+..+.+
T Consensus 14 ~~~~C~IC~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~~~ 64 (71)
T 2d8t_A 14 TVPECAICLQTCVHPVSLPCKHVFCYLCVKGASWLGKRCALCRQEIPEDFL 64 (71)
T ss_dssp SCCBCSSSSSBCSSEEEETTTEEEEHHHHHHCTTCSSBCSSSCCBCCHHHH
T ss_pred CCCCCccCCcccCCCEEccCCCHHHHHHHHHHHHCCCcCcCcCchhCHhhc
Confidence 468999999954432 2 25564222221 1233689999988876544
No 216
>3jyw_9 60S ribosomal protein L43; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}
Probab=64.31 E-value=1.8 Score=31.33 Aligned_cols=10 Identities=40% Similarity=1.242 Sum_probs=9.3
Q ss_pred ceeeCCCCCC
Q 027247 47 YEYPCPFCSE 56 (226)
Q Consensus 47 ~~f~CPfC~e 56 (226)
..|.||||+.
T Consensus 25 ~ky~C~fCgk 34 (72)
T 3jyw_9 25 ARYDCSFCGK 34 (72)
T ss_dssp SCBCCSSCCS
T ss_pred cCccCCCCCC
Confidence 7899999998
No 217
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=64.25 E-value=1.1 Score=32.20 Aligned_cols=42 Identities=33% Similarity=0.638 Sum_probs=24.5
Q ss_pred ceeeCCCCCCCccH----h-hhhhcccccCCCC---CccccCCccccCcc
Q 027247 47 YEYPCPFCSEDFDL----V-GLCCHIDEEHPVE---AKSGVCPVCVTRVT 88 (226)
Q Consensus 47 ~~f~CPfC~e~~dv----~-~L~~H~~~eH~~e---~~~vvCPVC~~~v~ 88 (226)
....||.|.++|.. . --|.|.-=.++.. .++..||+|...+.
T Consensus 39 ~~~~C~IC~~~~~~~~~~~~l~C~H~Fh~~Ci~~wl~~~~~CP~Cr~~~~ 88 (91)
T 2l0b_A 39 QEMCCPICCSEYVKGDVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMFP 88 (91)
T ss_dssp SCSEETTTTEECCTTCEEEEETTTEEEEHHHHHHHHTTTCBCTTTCCBSS
T ss_pred CCCCCcccChhhcCCCcEEecCCCChHHHHHHHHHHHcCCcCcCcCccCC
Confidence 45889999876543 1 1256642222221 23458999987654
No 218
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=64.21 E-value=0.56 Score=32.09 Aligned_cols=42 Identities=21% Similarity=0.329 Sum_probs=25.4
Q ss_pred ceeeCCCCCCCcc-Hhhh--hhcccccCCCC---CccccCCccccCcc
Q 027247 47 YEYPCPFCSEDFD-LVGL--CCHIDEEHPVE---AKSGVCPVCVTRVT 88 (226)
Q Consensus 47 ~~f~CPfC~e~~d-v~~L--~~H~~~eH~~e---~~~vvCPVC~~~v~ 88 (226)
..+.||.|.+.+. ...| |-|.-=..+.. .....||+|...+.
T Consensus 14 ~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~ 61 (72)
T 2djb_A 14 PYILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNRCPKCNIVVH 61 (72)
T ss_dssp GGGSCTTTSSCCSSCEECSSSCCEECHHHHHHHHHHCSSCTTTCCCCC
T ss_pred CCCCCCCCChHHHCcCEECCCCCHHHHHHHHHHHHcCCcCCCcCcccC
Confidence 6789999999664 3333 55632222211 12467999988765
No 219
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=64.18 E-value=3.5 Score=24.47 Aligned_cols=32 Identities=25% Similarity=0.366 Sum_probs=18.7
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCC
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCP 81 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCP 81 (226)
.|.|++|+..| ....|..|+. .|..+ +.-.|+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-k~~~C~ 44 (46)
T 2eq3_A 12 PYECNQCGKAFSVRSSLTTHQA-IHTGK-KPSGPS 44 (46)
T ss_dssp SSEETTTTEECSSHHHHHHHHT-TSCCC-CCCCSC
T ss_pred CeECCCCChhhCCHHHHHHHHH-HhCCC-CCCCCC
Confidence 47888888843 4566777764 34332 334554
No 220
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=64.04 E-value=4.3 Score=23.47 Aligned_cols=21 Identities=38% Similarity=0.675 Sum_probs=13.5
Q ss_pred eeeCCCCCCCc-cHhhhhhccc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHID 68 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~ 68 (226)
.|.|+.|+..| ....|..|..
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~ 31 (42)
T 2yte_A 10 PYSCAECKETFSDNNRLVQHQK 31 (42)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHH
T ss_pred CeECCCCCCccCCHHHHHHHHH
Confidence 47788887744 3456666754
No 221
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=63.88 E-value=5.3 Score=23.43 Aligned_cols=24 Identities=29% Similarity=0.515 Sum_probs=16.2
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCC
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHP 72 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~ 72 (226)
.|.|+.|+..| ....|..|.. .|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~ 36 (44)
T 2emb_A 12 RYECSKCQATFNLRKHLIQHQK-THA 36 (44)
T ss_dssp SEECTTTCCEESCHHHHHHHGG-GGC
T ss_pred CeECCCCCCccCCHHHHHHHHH-HcC
Confidence 48888888844 4566777764 454
No 222
>2ct5_A Zinc finger BED domain containing protein 1; DREF homolog, putative C-like transposable element, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.6
Probab=63.79 E-value=1.5 Score=31.56 Aligned_cols=16 Identities=13% Similarity=0.154 Sum_probs=13.7
Q ss_pred hhhHhhhhhccccccc
Q 027247 89 MDMVDHITTQHGNISN 104 (226)
Q Consensus 89 ~d~i~Hl~~qH~~~~K 104 (226)
.+|.+||...|...|+
T Consensus 46 SnL~rHL~~~H~~e~~ 61 (73)
T 2ct5_A 46 SNLSYHLEKNHPEEFC 61 (73)
T ss_dssp HHHHHHHHHSCHHHHH
T ss_pred HhHHHHHHHHCHHHHH
Confidence 6999999999987765
No 223
>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}
Probab=63.71 E-value=2.5 Score=27.04 Aligned_cols=21 Identities=19% Similarity=0.399 Sum_probs=18.2
Q ss_pred ceeeCCCCCCCccHhhhhhcc
Q 027247 47 YEYPCPFCSEDFDLVGLCCHI 67 (226)
Q Consensus 47 ~~f~CPfC~e~~dv~~L~~H~ 67 (226)
..|.||-|++.|.+...-+|.
T Consensus 8 ~~~~C~~C~~~i~~~~~~EH~ 28 (39)
T 2i5o_A 8 DQVPCEKCGSLVPVWDMPEHM 28 (39)
T ss_dssp CEEECTTTCCEEEGGGHHHHH
T ss_pred CCcccccccCcCCcccccchh
Confidence 579999999998888888885
No 224
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=63.64 E-value=2.4 Score=24.30 Aligned_cols=25 Identities=24% Similarity=0.332 Sum_probs=17.8
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCC
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHP 72 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~ 72 (226)
.|.|+.|+..| ....|..|+...|.
T Consensus 9 ~~~C~~C~k~f~~~~~L~~H~~~~H~ 34 (37)
T 2elm_A 9 LYYCSQCHYSSITKNCLKRHVIQKHS 34 (37)
T ss_dssp EEECSSSSCEEECHHHHHHHHHHHTC
T ss_pred CeECCCCCcccCCHHHHHHHHHHHcc
Confidence 59999999965 45677788434453
No 225
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=63.61 E-value=3.5 Score=21.49 Aligned_cols=21 Identities=24% Similarity=0.623 Sum_probs=14.8
Q ss_pred eeeCCCCCCCcc-Hhhhhhccc
Q 027247 48 EYPCPFCSEDFD-LVGLCCHID 68 (226)
Q Consensus 48 ~f~CPfC~e~~d-v~~L~~H~~ 68 (226)
.|.|+.|+..|. ...|..|..
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~ 24 (28)
T 2kvf_A 3 PYSCSVCGKRFSLKHQMETHYR 24 (28)
T ss_dssp SEECSSSCCEESCHHHHHHHHT
T ss_pred CccCCCCCcccCCHHHHHHHHH
Confidence 488999998554 466777753
No 226
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=63.53 E-value=2.2 Score=27.36 Aligned_cols=26 Identities=35% Similarity=0.828 Sum_probs=20.2
Q ss_pred ceeeCCCCCCCc-cHhhhhhcccccCC
Q 027247 47 YEYPCPFCSEDF-DLVGLCCHIDEEHP 72 (226)
Q Consensus 47 ~~f~CPfC~e~~-dv~~L~~H~~~eH~ 72 (226)
..|.||+|+..| ....|..|+...|.
T Consensus 39 ~~~~C~~C~k~f~~~~~L~~H~~~~H~ 65 (66)
T 2drp_A 39 KVYPCPFCFKEFTRKDNMTAHVKIIHK 65 (66)
T ss_dssp CCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred cCeECCCCCCccCCHHHHHHHHHHHcC
Confidence 359999999955 56788889876663
No 227
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=63.52 E-value=2.7 Score=23.16 Aligned_cols=21 Identities=33% Similarity=0.781 Sum_probs=15.8
Q ss_pred eeeCCCCCCCc-cHhhhhhccc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHID 68 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~ 68 (226)
.|.|+.|+..| ....|..|..
T Consensus 7 ~~~C~~C~k~f~~~~~L~~H~~ 28 (35)
T 2elx_A 7 GYVCALCLKKFVSSIRLRSHIR 28 (35)
T ss_dssp SEECSSSCCEESSHHHHHHHHH
T ss_pred CeECCCCcchhCCHHHHHHHHH
Confidence 59999999955 4567777864
No 228
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=63.33 E-value=1.6 Score=38.75 Aligned_cols=42 Identities=21% Similarity=0.466 Sum_probs=26.6
Q ss_pred ceeeCCCCCCCccHhh---hhhccccc-----CCCCCccccCCc--cccCcc
Q 027247 47 YEYPCPFCSEDFDLVG---LCCHIDEE-----HPVEAKSGVCPV--CVTRVT 88 (226)
Q Consensus 47 ~~f~CPfC~e~~dv~~---L~~H~~~e-----H~~e~~~vvCPV--C~~~v~ 88 (226)
..|.||.|..-|.... -|-|.-+. +-.......||| |...+.
T Consensus 180 ~el~CPIcl~~f~DPVts~~CGHsFcR~cI~~~~~~~~~~~CPvtGCr~~l~ 231 (267)
T 3htk_C 180 IELTCPITCKPYEAPLISRKCNHVFDRDGIQNYLQGYTTRDCPQAACSQVVS 231 (267)
T ss_dssp CCSBCTTTSSBCSSEEEESSSCCEEEHHHHHHHSTTCSCEECSGGGCSCEEC
T ss_pred eeeECcCccCcccCCeeeCCCCCcccHHHHHHHHHhCCCCCCCcccccCcCc
Confidence 6899999998444332 45665432 222334578999 988654
No 229
>3j21_i 50S ribosomal protein L37AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=63.27 E-value=1.9 Score=32.04 Aligned_cols=11 Identities=27% Similarity=0.890 Sum_probs=9.7
Q ss_pred ceeeCCCCCCC
Q 027247 47 YEYPCPFCSED 57 (226)
Q Consensus 47 ~~f~CPfC~e~ 57 (226)
..|.||||+..
T Consensus 34 ~ky~CpfCGk~ 44 (83)
T 3j21_i 34 QKHTCPVCGRK 44 (83)
T ss_dssp SCBCCSSSCSS
T ss_pred cccCCCCCCCc
Confidence 78999999983
No 230
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=62.93 E-value=0.63 Score=32.53 Aligned_cols=43 Identities=26% Similarity=0.502 Sum_probs=25.6
Q ss_pred ceeeCCCCCCCccH----h-hh-hhcccccCCC------CCccccCCccccCcch
Q 027247 47 YEYPCPFCSEDFDL----V-GL-CCHIDEEHPV------EAKSGVCPVCVTRVTM 89 (226)
Q Consensus 47 ~~f~CPfC~e~~dv----~-~L-~~H~~~eH~~------e~~~vvCPVC~~~v~~ 89 (226)
..+.||.|.+.|.. . .| |.|.-=..+. ......||+|...+..
T Consensus 14 ~~~~C~IC~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 68 (88)
T 2ct2_A 14 EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVRCPFCSKITRI 68 (88)
T ss_dssp SCCBCTTTCCBCCTTSSCEEECSSSCEEEHHHHHHHHHHCSSCBCCTTTCCCBCC
T ss_pred CCCCCccCCccccccCCCeEECCCCChhhHHHHHHHHHcCCCCcCCCCCCCcccc
Confidence 56899999997765 2 11 4443211111 1235789999887654
No 231
>4a17_Y RPL37A, 60S ribosomal protein L32; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_Y 4a1c_Y 4a1e_Y
Probab=62.87 E-value=2.3 Score=32.90 Aligned_cols=10 Identities=50% Similarity=1.477 Sum_probs=9.3
Q ss_pred ceeeCCCCCC
Q 027247 47 YEYPCPFCSE 56 (226)
Q Consensus 47 ~~f~CPfC~e 56 (226)
..|+|||||.
T Consensus 35 aky~CpfCgk 44 (103)
T 4a17_Y 35 AKYGCPFCGK 44 (103)
T ss_dssp SCEECTTTCC
T ss_pred cCCCCCCCCC
Confidence 7899999998
No 232
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=62.73 E-value=2.2 Score=31.46 Aligned_cols=27 Identities=26% Similarity=0.474 Sum_probs=18.5
Q ss_pred ceeeCCCCCCCc--cHhhhhhcccccCCCCCccccCCccccC
Q 027247 47 YEYPCPFCSEDF--DLVGLCCHIDEEHPVEAKSGVCPVCVTR 86 (226)
Q Consensus 47 ~~f~CPfC~e~~--dv~~L~~H~~~eH~~e~~~vvCPVC~~~ 86 (226)
..|+|||||.+. +.. .....||-|-..
T Consensus 26 ~~y~Cp~CG~~~v~r~a-------------tGiW~C~~Cg~~ 54 (83)
T 1vq8_Z 26 EDHACPNCGEDRVDRQG-------------TGIWQCSYCDYK 54 (83)
T ss_dssp SCEECSSSCCEEEEEEE-------------TTEEEETTTCCE
T ss_pred ccCcCCCCCCcceeccC-------------CCeEECCCCCCE
Confidence 679999999832 221 235679999764
No 233
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=62.67 E-value=3 Score=23.24 Aligned_cols=21 Identities=33% Similarity=0.634 Sum_probs=15.9
Q ss_pred eeeCCCCCCCcc-Hhhhhhccc
Q 027247 48 EYPCPFCSEDFD-LVGLCCHID 68 (226)
Q Consensus 48 ~f~CPfC~e~~d-v~~L~~H~~ 68 (226)
.|.|++|+..|. ...|..|..
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~ 30 (36)
T 2elt_A 9 PYKCPQCSYASAIKANLNVHLR 30 (36)
T ss_dssp SEECSSSSCEESSHHHHHHHHH
T ss_pred CCCCCCCCcccCCHHHHHHHHH
Confidence 599999999654 466777763
No 234
>3iz5_m 60S ribosomal protein L43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_m 1ysh_D 2zkr_z
Probab=62.19 E-value=2.1 Score=32.38 Aligned_cols=11 Identities=36% Similarity=0.905 Sum_probs=9.7
Q ss_pred ceeeCCCCCCC
Q 027247 47 YEYPCPFCSED 57 (226)
Q Consensus 47 ~~f~CPfC~e~ 57 (226)
..|.||||+..
T Consensus 35 ~ky~CpfCgk~ 45 (92)
T 3iz5_m 35 SKYFCEFCGKF 45 (92)
T ss_dssp SCBCCTTTCSS
T ss_pred ccccCcccCCC
Confidence 78999999983
No 235
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=62.17 E-value=0.75 Score=34.03 Aligned_cols=41 Identities=29% Similarity=0.464 Sum_probs=25.5
Q ss_pred eeeCCCCCCCccHhh------------------h--hhcccccCCCC--------CccccCCccccCcc
Q 027247 48 EYPCPFCSEDFDLVG------------------L--CCHIDEEHPVE--------AKSGVCPVCVTRVT 88 (226)
Q Consensus 48 ~f~CPfC~e~~dv~~------------------L--~~H~~~eH~~e--------~~~vvCPVC~~~v~ 88 (226)
...||.|-+.|.... + |.|+-=.++.. .+...||+|...++
T Consensus 25 ~~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~~~~ 93 (114)
T 1v87_A 25 EEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIYG 93 (114)
T ss_dssp SCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCBSS
T ss_pred CCcCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHHHHHHcccCCCCCcCCCCCCccC
Confidence 357999988775432 2 66754444431 34568999976543
No 236
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=61.91 E-value=2.2 Score=25.55 Aligned_cols=32 Identities=28% Similarity=0.443 Sum_probs=17.9
Q ss_pred eeeCCCCCCCcc-HhhhhhcccccCCCCCccccCC
Q 027247 48 EYPCPFCSEDFD-LVGLCCHIDEEHPVEAKSGVCP 81 (226)
Q Consensus 48 ~f~CPfC~e~~d-v~~L~~H~~~eH~~e~~~vvCP 81 (226)
.|.|++|+..|. ...|..|+. .|..+ +.-.|+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-k~~~C~ 44 (46)
T 2emz_A 12 PFKCNECGKGFGRRSHLAGHLR-LHSRE-KSSGPS 44 (46)
T ss_dssp SCCCSSSCCCCSSHHHHHHHHH-HHHHT-TCCCSC
T ss_pred CeECCCCCcccCCHHHHHHHHH-HhCCC-CCCCCC
Confidence 478888888443 455666753 34322 334554
No 237
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=61.91 E-value=3.8 Score=22.69 Aligned_cols=21 Identities=19% Similarity=0.559 Sum_probs=16.1
Q ss_pred eeeCCCCCCCc-cHhhhhhccc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHID 68 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~ 68 (226)
.|.|++|+..| ....|..|..
T Consensus 7 ~~~C~~C~k~f~~~~~l~~H~~ 28 (35)
T 1srk_A 7 PFVCRICLSAFTTKANCARHLK 28 (35)
T ss_dssp CEECSSSCCEESSHHHHHHHHG
T ss_pred CeeCCCCCcccCCHHHHHHHHH
Confidence 59999999955 5567777864
No 238
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=65.91 E-value=1.7 Score=23.04 Aligned_cols=21 Identities=29% Similarity=0.589 Sum_probs=15.0
Q ss_pred eeeCCCCCCCcc-Hhhhhhccc
Q 027247 48 EYPCPFCSEDFD-LVGLCCHID 68 (226)
Q Consensus 48 ~f~CPfC~e~~d-v~~L~~H~~ 68 (226)
.|.|++|+..|. ...|..|..
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~ 24 (30)
T 2lvr_A 3 PYVCIHCQRQFADPGALQRHVR 24 (30)
Confidence 488999999654 456667764
No 239
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=61.40 E-value=3.2 Score=23.24 Aligned_cols=22 Identities=18% Similarity=0.493 Sum_probs=16.5
Q ss_pred ceeeCCCCCCCc-cHhhhhhccc
Q 027247 47 YEYPCPFCSEDF-DLVGLCCHID 68 (226)
Q Consensus 47 ~~f~CPfC~e~~-dv~~L~~H~~ 68 (226)
..|.|++|+..| ....|..|..
T Consensus 8 k~~~C~~C~k~f~~~~~l~~H~~ 30 (36)
T 2elq_A 8 KPFKCSLCEYATRSKSNLKAHMN 30 (36)
T ss_dssp CSEECSSSSCEESCHHHHHHHHH
T ss_pred CCccCCCCCchhCCHHHHHHHHH
Confidence 359999999955 5577777863
No 240
>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}
Probab=61.25 E-value=5.5 Score=27.36 Aligned_cols=32 Identities=22% Similarity=0.282 Sum_probs=23.6
Q ss_pred ceeeCCCCCCCccHhhhhhcccccCCCCCccccCC
Q 027247 47 YEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCP 81 (226)
Q Consensus 47 ~~f~CPfC~e~~dv~~L~~H~~~eH~~e~~~vvCP 81 (226)
-..+|+||+..+....|-.|.+ + -....+.||
T Consensus 43 r~v~C~~C~~~~~~~~l~~H~~-~--Cp~~~v~C~ 74 (76)
T 2yuc_A 43 RRLKCEFCGCDFSGEAYESHEG-M--CPQESSGPS 74 (76)
T ss_dssp SCCCCSSSCCCCCHHHHHHTTT-S--CTTSSCCCS
T ss_pred cceECCCCCCccCHHHHHHHHh-H--CCCCccCCC
Confidence 3689999999999999999973 2 223345555
No 241
>3izc_m 60S ribosomal protein RPL43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_m 3o58_g 3o5h_g 3u5e_p 3u5i_p 4b6a_p 1s1i_9
Probab=61.21 E-value=2.1 Score=32.39 Aligned_cols=10 Identities=40% Similarity=1.242 Sum_probs=9.3
Q ss_pred ceeeCCCCCC
Q 027247 47 YEYPCPFCSE 56 (226)
Q Consensus 47 ~~f~CPfC~e 56 (226)
..|.||||+.
T Consensus 35 ~ky~CpfCgk 44 (92)
T 3izc_m 35 ARYDCSFCGK 44 (92)
T ss_dssp SCCCCSSSCS
T ss_pred cCCcCCCCCC
Confidence 7899999998
No 242
>1ffk_W Ribosomal protein L37AE; ribosome assembly, RNA-RNA, protein-RNA, protein-protein; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1jj2_Y 1k73_1* 1k8a_1* 1k9m_1* 1kc8_1* 1kd1_1* 1kqs_Y* 1m1k_1* 1m90_1* 1n8r_1* 1nji_1* 1q7y_1* 1q81_1* 1q82_1* 1q86_1* 1qvf_Y 1qvg_Y 1w2b_Y 3cxc_Y*
Probab=60.98 E-value=2.4 Score=30.72 Aligned_cols=13 Identities=31% Similarity=0.935 Sum_probs=10.6
Q ss_pred ceeeCCCCCC-Ccc
Q 027247 47 YEYPCPFCSE-DFD 59 (226)
Q Consensus 47 ~~f~CPfC~e-~~d 59 (226)
..|+||||+. .+.
T Consensus 26 ~ky~C~fCgk~~vk 39 (73)
T 1ffk_W 26 KKYKCPVCGFPKLK 39 (73)
T ss_pred cCccCCCCCCceeE
Confidence 7899999998 443
No 243
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=60.70 E-value=4.3 Score=23.79 Aligned_cols=24 Identities=29% Similarity=0.517 Sum_probs=15.0
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCC
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHP 72 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~ 72 (226)
.|.|++|+..| ....|..|.. .|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~ 36 (44)
T 2eoj_A 12 PYECCECGKVFSRKDQLVSHQK-THS 36 (44)
T ss_dssp SCEETTTTEECSSHHHHHHHHT-TSS
T ss_pred CeeCCCCCCccCCHHHHHHHHH-HcC
Confidence 47888888744 4456677753 344
No 244
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=60.66 E-value=0.74 Score=30.12 Aligned_cols=43 Identities=19% Similarity=0.600 Sum_probs=26.3
Q ss_pred ceeeCCCCCCCccHh---------hhhhcccccCCCC---CccccCCccccCcch
Q 027247 47 YEYPCPFCSEDFDLV---------GLCCHIDEEHPVE---AKSGVCPVCVTRVTM 89 (226)
Q Consensus 47 ~~f~CPfC~e~~dv~---------~L~~H~~~eH~~e---~~~vvCPVC~~~v~~ 89 (226)
..+.||.|.+.+... .-|.|.-=..+.. .+...||+|...+..
T Consensus 2 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 56 (64)
T 2xeu_A 2 AMVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINH 56 (64)
T ss_dssp CCCBCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHHHHHCSBCTTTCCBCTT
T ss_pred CCCCCCccChhhhCccccCCCEEeCCCCCchhHHHHHHHHHcCCCCCCCCccCCc
Confidence 468899999987653 2355542222221 124589999887654
No 245
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=60.42 E-value=4.5 Score=33.63 Aligned_cols=42 Identities=12% Similarity=-0.079 Sum_probs=22.1
Q ss_pred ceeeCCCCCCCccHhh--hhhcccccCCCC----CccccCCccccCcc
Q 027247 47 YEYPCPFCSEDFDLVG--LCCHIDEEHPVE----AKSGVCPVCVTRVT 88 (226)
Q Consensus 47 ~~f~CPfC~e~~dv~~--L~~H~~~eH~~e----~~~vvCPVC~~~v~ 88 (226)
..|.||.|.+-+.-.. -|-|.-...+.+ .....||+|...+.
T Consensus 207 ~~~~c~i~~~~~~dPv~~~~gh~f~~~~i~~~~~~~~~~cP~~~~~~~ 254 (281)
T 2c2l_A 207 DYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFNPVTRSPLT 254 (281)
T ss_dssp STTBCTTTCSBCSSEEECSSCCEEETTHHHHHHHHTCSSCTTTCCCCC
T ss_pred cccCCcCcCCHhcCCeECCCCCEECHHHHHHHHHHCCCCCcCCCCCCc
Confidence 5799999987333221 133332222211 11224999988765
No 246
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=59.48 E-value=6.5 Score=26.41 Aligned_cols=12 Identities=33% Similarity=1.018 Sum_probs=8.0
Q ss_pred eeeCCCCCCCcc
Q 027247 48 EYPCPFCSEDFD 59 (226)
Q Consensus 48 ~f~CPfC~e~~d 59 (226)
.|.|+.||--+|
T Consensus 3 ~y~C~~CGyvYd 14 (52)
T 1e8j_A 3 IYVCTVCGYEYD 14 (52)
T ss_dssp CEECSSSCCCCC
T ss_pred cEEeCCCCeEEc
Confidence 477777776544
No 247
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=59.32 E-value=1.3 Score=30.09 Aligned_cols=42 Identities=29% Similarity=0.509 Sum_probs=23.9
Q ss_pred ceeeCCCCCCCccHhh-----hhhcccccCCCC---CccccCCccccCcc
Q 027247 47 YEYPCPFCSEDFDLVG-----LCCHIDEEHPVE---AKSGVCPVCVTRVT 88 (226)
Q Consensus 47 ~~f~CPfC~e~~dv~~-----L~~H~~~eH~~e---~~~vvCPVC~~~v~ 88 (226)
....||.|.+.|.... -|.|.-=.++.. .+...||+|...+.
T Consensus 14 ~~~~C~IC~~~~~~~~~~~~~~C~H~f~~~Ci~~~~~~~~~CP~Cr~~~~ 63 (74)
T 2ep4_A 14 LHELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPVL 63 (74)
T ss_dssp CSCBCSSSCCBCCSSSCEEEETTTEEEEHHHHHHHHHHCSBCTTTCCBCS
T ss_pred CCCCCcCCCcccCCCCcEEEcCCCCEecHHHHHHHHHcCCcCCCcCcccc
Confidence 4578999999764322 255542222221 12348999977653
No 248
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=59.30 E-value=5.8 Score=22.85 Aligned_cols=25 Identities=32% Similarity=0.585 Sum_probs=18.3
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCC
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPV 73 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~ 73 (226)
.|.|++|+..| ....|..|.. .|..
T Consensus 11 ~~~C~~C~k~f~~~~~L~~H~~-~H~~ 36 (42)
T 2ytb_A 11 PYRCDQCGKAFSQKGSLIVHIR-VHTG 36 (42)
T ss_dssp SBCCTTTTCCBSSHHHHHTTGG-GTSC
T ss_pred CeeCCCccchhCCHHHHHHHHH-HhCC
Confidence 59999999955 4577888874 4543
No 249
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=59.14 E-value=4.3 Score=22.50 Aligned_cols=22 Identities=23% Similarity=0.327 Sum_probs=16.4
Q ss_pred ceeeCCCCCCCcc-Hhhhhhccc
Q 027247 47 YEYPCPFCSEDFD-LVGLCCHID 68 (226)
Q Consensus 47 ~~f~CPfC~e~~d-v~~L~~H~~ 68 (226)
..|.|+.|+..|. ...|..|..
T Consensus 8 ~~~~C~~C~k~f~~~~~l~~H~~ 30 (36)
T 2elr_A 8 KTHLCDMCGKKFKSKGTLKSHKL 30 (36)
T ss_dssp SSCBCTTTCCBCSSHHHHHHHHH
T ss_pred CCeecCcCCCCcCchHHHHHHHH
Confidence 3599999999664 567777763
No 250
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=63.39 E-value=2 Score=22.27 Aligned_cols=19 Identities=37% Similarity=0.690 Sum_probs=13.9
Q ss_pred eeCCCCCCCcc-Hhhhhhcc
Q 027247 49 YPCPFCSEDFD-LVGLCCHI 67 (226)
Q Consensus 49 f~CPfC~e~~d-v~~L~~H~ 67 (226)
|.|+.|+..|. ...|..|.
T Consensus 3 ~~C~~C~k~f~~~~~l~~H~ 22 (26)
T 2lvu_A 3 YVCERCGKRFVQSSQLANHI 22 (26)
Confidence 78999998665 45666665
No 251
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=58.86 E-value=4.1 Score=22.75 Aligned_cols=19 Identities=37% Similarity=0.789 Sum_probs=12.9
Q ss_pred eeCCCCCCCc-cHhhhhhcc
Q 027247 49 YPCPFCSEDF-DLVGLCCHI 67 (226)
Q Consensus 49 f~CPfC~e~~-dv~~L~~H~ 67 (226)
|.|+.|+..| ....|..|+
T Consensus 3 ~~C~~C~k~F~~~~~L~~H~ 22 (33)
T 1rim_A 3 FACPECPKRFMRSDHLSKHI 22 (33)
T ss_dssp CCCSSSCCCCSSHHHHHHHH
T ss_pred ccCCCCCchhCCHHHHHHHH
Confidence 7788888854 455666665
No 252
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=58.83 E-value=0.69 Score=36.71 Aligned_cols=42 Identities=21% Similarity=0.494 Sum_probs=26.4
Q ss_pred ceeeCCCCCCCccHh-h--hhhcccccCCC----CCccccCCccccCcc
Q 027247 47 YEYPCPFCSEDFDLV-G--LCCHIDEEHPV----EAKSGVCPVCVTRVT 88 (226)
Q Consensus 47 ~~f~CPfC~e~~dv~-~--L~~H~~~eH~~----e~~~vvCPVC~~~v~ 88 (226)
..+.||.|.+.|... . -|.|.-=..+. ......||+|...+.
T Consensus 53 ~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~ 101 (165)
T 2ckl_B 53 SELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLV 101 (165)
T ss_dssp HHHBCTTTSSBCSSEEEETTTCCEEEHHHHHHHHHTTCCBCTTTCCBCC
T ss_pred CCCCCcccChHhhCcCEeCCCCChhHHHHHHHHHHhCcCCCCCCCCcCC
Confidence 578999999955543 2 25564333332 223578999988764
No 253
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=58.60 E-value=2 Score=30.86 Aligned_cols=49 Identities=16% Similarity=0.417 Sum_probs=30.8
Q ss_pred ceeeCCCCCCCccHhhh-----hhccc-----ccCCC----C--CccccCCc--cccC--cchhhHhhh
Q 027247 47 YEYPCPFCSEDFDLVGL-----CCHID-----EEHPV----E--AKSGVCPV--CVTR--VTMDMVDHI 95 (226)
Q Consensus 47 ~~f~CPfC~e~~dv~~L-----~~H~~-----~eH~~----e--~~~vvCPV--C~~~--v~~d~i~Hl 95 (226)
..|.||.|.+++..... |.|.- ..|-. + .....||. |... +..+.+..+
T Consensus 4 ~~~~C~IC~~~~~~~~~~~l~~CgH~FC~~Cl~~~~~~~i~~g~~~~i~CP~~~C~~~~~~~~~~i~~l 72 (94)
T 1wim_A 4 GSSGCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQGHLQENEIECM 72 (94)
T ss_dssp SBCCCSSSCCCCBGGGEEEETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTTCSSCCEECHHHHHHH
T ss_pred CCcCCcccCcccccccceEcCCCCCcccHHHHHHHHHHHhhcCCcccccCccccCCCCCccCHHHHHHH
Confidence 46899999997765432 66621 11111 1 13578999 9888 776666544
No 254
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=58.31 E-value=5.5 Score=21.94 Aligned_cols=24 Identities=29% Similarity=0.629 Sum_probs=15.6
Q ss_pred eeCCCCCCCccH-hhhhhcccccCCC
Q 027247 49 YPCPFCSEDFDL-VGLCCHIDEEHPV 73 (226)
Q Consensus 49 f~CPfC~e~~dv-~~L~~H~~~eH~~ 73 (226)
|.|+.|+..|.. ..|..|. ..|..
T Consensus 3 ~~C~~C~k~f~~~~~L~~H~-~~H~~ 27 (32)
T 2kfq_A 3 FACPACPKRFMRSDALSKHI-KTAFI 27 (32)
T ss_dssp SSSSSSCTTHHHHHTTSSST-TSSSS
T ss_pred CCCCCCCcccCCHHHHHHHH-HHHcc
Confidence 788889886654 4566675 33543
No 255
>3cc2_Z 50S ribosomal protein L37AE, 50S ribosomal protein L32E; genomic sequnece for R-proteins, ribonucleoprotein, ribosoma protein, RNA-binding; HET: 1MA OMU OMG UR3 PSU; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 3cc4_Z* 3cc7_Z* 3cce_Z* 3ccj_Z* 3ccl_Z* 3ccm_Z* 3ccq_Z* 3ccr_Z* 3ccs_Z* 3ccu_Z* 3ccv_Z* 3cd6_Z* 3cma_Z* 3cme_Z* 3i55_Z* 3i56_Z* 3cpw_Y* 4adx_Z
Probab=58.26 E-value=2.9 Score=32.90 Aligned_cols=29 Identities=28% Similarity=0.570 Sum_probs=19.0
Q ss_pred ceeeCCCCCC-CccHhhhhhcccccCCCCCccccCCccccCc
Q 027247 47 YEYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVCVTRV 87 (226)
Q Consensus 47 ~~f~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vvCPVC~~~v 87 (226)
..|.|||||. .+-... ..--.|+-|-..+
T Consensus 59 akytCPfCGk~~vKR~a------------vGIW~C~~Cgk~f 88 (116)
T 3cc2_Z 59 EDHACPNCGEDRVDRQG------------TGIWQCSYCDYKF 88 (116)
T ss_dssp SCEECSSSCCEEEEEEE------------TTEEEETTTCCEE
T ss_pred cCCcCCCCCCceeEecC------------ceeEECCCCCCEE
Confidence 7899999998 443222 1344588887653
No 256
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=58.00 E-value=3.2 Score=21.84 Aligned_cols=20 Identities=30% Similarity=0.855 Sum_probs=14.5
Q ss_pred eeeCCCCCCCcc-Hhhhhhcc
Q 027247 48 EYPCPFCSEDFD-LVGLCCHI 67 (226)
Q Consensus 48 ~f~CPfC~e~~d-v~~L~~H~ 67 (226)
.|.|+.|+..|. ...|..|.
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~ 23 (27)
T 2kvg_A 3 PYRCPLCRAGCPSLASMQAHM 23 (27)
T ss_dssp TEEETTTTEEESCHHHHHHHH
T ss_pred CcCCCCCCcccCCHHHHHHHH
Confidence 488999998554 45677775
No 257
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=62.59 E-value=2.1 Score=22.64 Aligned_cols=20 Identities=25% Similarity=0.680 Sum_probs=14.2
Q ss_pred eeCCCCCCCcc-Hhhhhhccc
Q 027247 49 YPCPFCSEDFD-LVGLCCHID 68 (226)
Q Consensus 49 f~CPfC~e~~d-v~~L~~H~~ 68 (226)
|.|+.|+..|. ...|..|..
T Consensus 3 ~~C~~C~k~f~~~~~l~~H~~ 23 (29)
T 2lvt_A 3 CQCVMCGKAFTQASSLIAHVR 23 (29)
Confidence 78999988654 456777763
No 258
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=57.73 E-value=4.2 Score=22.74 Aligned_cols=22 Identities=23% Similarity=0.508 Sum_probs=15.9
Q ss_pred ceeeCCCCCCCc-cHhhhhhccc
Q 027247 47 YEYPCPFCSEDF-DLVGLCCHID 68 (226)
Q Consensus 47 ~~f~CPfC~e~~-dv~~L~~H~~ 68 (226)
..|.|+.|+..| ....|..|..
T Consensus 8 k~~~C~~C~k~f~~~~~l~~H~~ 30 (36)
T 2elv_A 8 LLYDCHICERKFKNELDRDRHML 30 (36)
T ss_dssp CCEECSSSCCEESSHHHHHHHHT
T ss_pred CCeECCCCCCccCCHHHHHHHHH
Confidence 359999999954 4556777864
No 259
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=57.67 E-value=4.5 Score=23.76 Aligned_cols=20 Identities=25% Similarity=0.428 Sum_probs=11.6
Q ss_pred eeeCCCCCCCcc-Hhhhhhcc
Q 027247 48 EYPCPFCSEDFD-LVGLCCHI 67 (226)
Q Consensus 48 ~f~CPfC~e~~d-v~~L~~H~ 67 (226)
.|.|++|+..|. ...|..|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~ 32 (44)
T 2yu5_A 12 PFKCSKCDRVFTQRNYLVQHE 32 (44)
T ss_dssp SEECSSSSCEESSSHHHHHHH
T ss_pred CeECCCCCchhCCHHHHHHHh
Confidence 367777777333 35556665
No 260
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=57.36 E-value=3.1 Score=23.40 Aligned_cols=21 Identities=33% Similarity=0.808 Sum_probs=15.7
Q ss_pred eeeCCCCCCCc-cHhhhhhccc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHID 68 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~ 68 (226)
.|.|++|+..| ....|..|..
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~ 30 (37)
T 2elo_A 9 SYSCPVCEKSFSEDRLIKSHIK 30 (37)
T ss_dssp CCEETTTTEECSSHHHHHHHHH
T ss_pred CcCCCCCCCccCCHHHHHHHHH
Confidence 59999999954 4566777764
No 261
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=56.35 E-value=1.3 Score=31.96 Aligned_cols=43 Identities=26% Similarity=0.463 Sum_probs=26.4
Q ss_pred ceeeCCCCCCCccHh-hh--hhcccccCCC---CCccccCCccccCcch
Q 027247 47 YEYPCPFCSEDFDLV-GL--CCHIDEEHPV---EAKSGVCPVCVTRVTM 89 (226)
Q Consensus 47 ~~f~CPfC~e~~dv~-~L--~~H~~~eH~~---e~~~vvCPVC~~~v~~ 89 (226)
..+.||.|.+.+... .+ |.|.-=..+. -.....||+|...+..
T Consensus 21 ~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~ 69 (99)
T 2y43_A 21 DLLRCGICFEYFNIAMIIPQCSHNYCSLCIRKFLSYKTQCPTCCVTVTE 69 (99)
T ss_dssp HHTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHTTCCBCTTTCCBCCG
T ss_pred CCCCcccCChhhCCcCEECCCCCHhhHHHHHHHHHCCCCCCCCCCcCCh
Confidence 579999999965543 33 6663222221 0124689999887763
No 262
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A
Probab=56.33 E-value=4.3 Score=34.04 Aligned_cols=26 Identities=27% Similarity=0.640 Sum_probs=18.7
Q ss_pred ceeeCCCCCCCccHhhhhhcccccCCCCCccccCCccccC
Q 027247 47 YEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTR 86 (226)
Q Consensus 47 ~~f~CPfC~e~~dv~~L~~H~~~eH~~e~~~vvCPVC~~~ 86 (226)
..|.|+.||--++ + ..+-+||+|...
T Consensus 170 ~~~~C~~CG~i~~--g------------~~p~~CP~C~~~ 195 (202)
T 1yuz_A 170 KFHLCPICGYIHK--G------------EDFEKCPICFRP 195 (202)
T ss_dssp CEEECSSSCCEEE--S------------SCCSBCTTTCCB
T ss_pred cEEEECCCCCEEc--C------------cCCCCCCCCCCC
Confidence 4799999998655 1 123799999653
No 263
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=56.21 E-value=5.9 Score=29.20 Aligned_cols=39 Identities=18% Similarity=0.231 Sum_probs=21.4
Q ss_pred ceeeCCCCCCCccHhhh--hhcccccCCCCCcc--ccCCcccc
Q 027247 47 YEYPCPFCSEDFDLVGL--CCHIDEEHPVEAKS--GVCPVCVT 85 (226)
Q Consensus 47 ~~f~CPfC~e~~dv~~L--~~H~~~eH~~e~~~--vvCPVC~~ 85 (226)
..|.|+.||--+|...- ..=+.---+++.-. -+||+|.+
T Consensus 26 ~~y~C~vCGyvYD~~~Gdp~~gI~pGT~fedlPddW~CPvCga 68 (81)
T 2kn9_A 26 KLFRCIQCGFEYDEALGWPEDGIAAGTRWDDIPDDWSCPDCGA 68 (81)
T ss_dssp CEEEETTTCCEEETTTCBTTTTBCTTCCTTTSCTTCCCTTTCC
T ss_pred ceEEeCCCCEEEcCCcCCcccCcCCCCChhHCCCCCcCCCCCC
Confidence 47999999986654321 11111112233323 38999977
No 264
>3flo_B DNA polymerase alpha catalytic subunit A; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae}
Probab=56.13 E-value=3.1 Score=35.43 Aligned_cols=39 Identities=26% Similarity=0.506 Sum_probs=26.8
Q ss_pred ceeeCCCCCCCccHhhhhhcccccCC-CCCccccCCccccCcc
Q 027247 47 YEYPCPFCSEDFDLVGLCCHIDEEHP-VEAKSGVCPVCVTRVT 88 (226)
Q Consensus 47 ~~f~CPfC~e~~dv~~L~~H~~~eH~-~e~~~vvCPVC~~~v~ 88 (226)
-.|.||.|+..+...++.. .... ....-..||-|...++
T Consensus 21 l~l~Cp~C~~~~~F~gv~~---~~~~~~~~sg~~C~~C~~~~~ 60 (206)
T 3flo_B 21 LELSCPSCDKRFPFGGIVS---SNYYRVSYNGLQCKHCEQLFT 60 (206)
T ss_dssp EEEECTTTCCEEEECSSSC---CSSEEEETTEEEETTTCCBCC
T ss_pred eEEECCCCCCccCCCCccc---CCCcccccccccCCCCCCcCC
Confidence 4799999999777667652 1111 2445578999988765
No 265
>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=55.94 E-value=4.8 Score=27.19 Aligned_cols=22 Identities=27% Similarity=0.455 Sum_probs=18.1
Q ss_pred ceeeCCCCCCCcc-Hhhhhhccc
Q 027247 47 YEYPCPFCSEDFD-LVGLCCHID 68 (226)
Q Consensus 47 ~~f~CPfC~e~~d-v~~L~~H~~ 68 (226)
-.|.||-|+..|. ...|..|..
T Consensus 11 ~~~~CPrCn~~f~~~~sLr~Hmk 33 (49)
T 2e72_A 11 GRKICPRCNAQFRVTEALRGHMC 33 (49)
T ss_dssp SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred CceeCCcccccccchHHHHhhhh
Confidence 3599999999888 778888864
No 266
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=55.11 E-value=1.1 Score=33.04 Aligned_cols=43 Identities=23% Similarity=0.432 Sum_probs=25.2
Q ss_pred ceeeCCCCCCCccH-hhh--hhcccccCCCC---CccccCCccccCcch
Q 027247 47 YEYPCPFCSEDFDL-VGL--CCHIDEEHPVE---AKSGVCPVCVTRVTM 89 (226)
Q Consensus 47 ~~f~CPfC~e~~dv-~~L--~~H~~~eH~~e---~~~vvCPVC~~~v~~ 89 (226)
..+.||.|.+.+.. ..+ |.|.-=..+.. .....||+|...+..
T Consensus 14 ~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~ 62 (108)
T 2ckl_A 14 PHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHK 62 (108)
T ss_dssp GGTBCTTTSSBCSSEEEETTTCCEEEHHHHHHHHTSCSBCTTTCCBSCS
T ss_pred CcCCCccCChHHhCcCEeCCCCChhhHHHHHHHHHhCCcCcCCCccccc
Confidence 57899999995543 333 55532211110 123789999887653
No 267
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=54.85 E-value=6.5 Score=22.64 Aligned_cols=25 Identities=28% Similarity=0.460 Sum_probs=18.2
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCC
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPV 73 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~ 73 (226)
.|.|++|+..| ....|..|.. .|..
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~-~H~~ 35 (41)
T 2ept_A 10 VYECQECGKSFRQKGSLTLHER-IHTG 35 (41)
T ss_dssp CEECSSSCCEESSHHHHHHHGG-GCCC
T ss_pred CeECCCCCCCcCCHHHHHHHHH-HhCC
Confidence 59999999955 4567888864 4543
No 268
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=54.77 E-value=4.8 Score=30.71 Aligned_cols=27 Identities=33% Similarity=0.566 Sum_probs=20.5
Q ss_pred ceeeCCCCCCCccHhhhhhcccccCCCCCccc-cCCccccC
Q 027247 47 YEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSG-VCPVCVTR 86 (226)
Q Consensus 47 ~~f~CPfC~e~~dv~~L~~H~~~eH~~e~~~v-vCPVC~~~ 86 (226)
..|.|+-||..|... .... .||.|...
T Consensus 72 ~~~~C~~CG~~~e~~-------------~~~~~~CP~Cgs~ 99 (119)
T 2kdx_A 72 VELECKDCSHVFKPN-------------ALDYGVCEKCHSK 99 (119)
T ss_dssp CEEECSSSSCEECSC-------------CSTTCCCSSSSSC
T ss_pred ceEEcCCCCCEEeCC-------------CCCCCcCccccCC
Confidence 579999999977762 2346 89999664
No 269
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=54.52 E-value=1.4 Score=34.06 Aligned_cols=42 Identities=31% Similarity=0.544 Sum_probs=24.6
Q ss_pred ceeeCCCCCCCccH-hhh-hhcccccCCC---CCccccCCccccCcc
Q 027247 47 YEYPCPFCSEDFDL-VGL-CCHIDEEHPV---EAKSGVCPVCVTRVT 88 (226)
Q Consensus 47 ~~f~CPfC~e~~dv-~~L-~~H~~~eH~~---e~~~vvCPVC~~~v~ 88 (226)
..+.||.|.+.|.. ..| |.|.-=..+. -.+...||+|...+.
T Consensus 52 ~~~~C~iC~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~ 98 (138)
T 4ayc_A 52 NELQCIICSEYFIEAVTLNCAHSFCSYCINEWMKRKIECPICRKDIK 98 (138)
T ss_dssp HHSBCTTTCSBCSSEEEETTSCEEEHHHHHHHTTTCSBCTTTCCBCC
T ss_pred ccCCCcccCcccCCceECCCCCCccHHHHHHHHHcCCcCCCCCCcCC
Confidence 46889999995433 322 5553222221 123467999987654
No 270
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=54.45 E-value=6.6 Score=26.74 Aligned_cols=12 Identities=33% Similarity=0.999 Sum_probs=7.4
Q ss_pred eeeCCCCCCCcc
Q 027247 48 EYPCPFCSEDFD 59 (226)
Q Consensus 48 ~f~CPfC~e~~d 59 (226)
.|.|+.||--+|
T Consensus 3 ~y~C~vCGyvYd 14 (54)
T 4rxn_A 3 KYTCTVCGYIYD 14 (54)
T ss_dssp CEEETTTCCEEC
T ss_pred ceECCCCCeEEC
Confidence 467777776444
No 271
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=54.35 E-value=4.1 Score=26.52 Aligned_cols=26 Identities=27% Similarity=0.502 Sum_probs=20.4
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCC
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPV 73 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~ 73 (226)
.|.|++|+..| ....|..|+...|.-
T Consensus 37 ~~~C~~C~~~f~~~~~L~~H~~~h~~~ 63 (70)
T 1x5w_A 37 PFKCNYCSFDTKQPSNLSKHMKKFHGD 63 (70)
T ss_dssp SEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred CEeCCCCCCccCCHHHHHHHHHHHhCC
Confidence 49999999955 567899998766543
No 272
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=54.27 E-value=5.4 Score=28.42 Aligned_cols=39 Identities=23% Similarity=0.419 Sum_probs=19.8
Q ss_pred ceeeCCCCCCCccHhhh--hhcccccCCCCCcc--ccCCcccc
Q 027247 47 YEYPCPFCSEDFDLVGL--CCHIDEEHPVEAKS--GVCPVCVT 85 (226)
Q Consensus 47 ~~f~CPfC~e~~dv~~L--~~H~~~eH~~e~~~--vvCPVC~~ 85 (226)
..|.|+.||--+|-..- -.-+.---+++.-. -+||+|.+
T Consensus 6 ~~y~C~vCGyiYd~~~Gdp~~gi~pGT~f~~lPddw~CP~Cga 48 (70)
T 1dx8_A 6 GKYECEACGYIYEPEKGDKFAGIPPGTPFVDLSDSFMCPACRS 48 (70)
T ss_dssp SCEEETTTCCEECTTTCCTTTTCCSSCCGGGSCTTCBCTTTCC
T ss_pred ceEEeCCCCEEEcCCCCCcccCcCCCCchhhCCCCCcCCCCCC
Confidence 46999999975553221 00111111222222 38999976
No 273
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=54.27 E-value=3.3 Score=30.60 Aligned_cols=43 Identities=33% Similarity=0.430 Sum_probs=25.7
Q ss_pred ceeeCCCCCCCccHh--hhhhcccccCC----CCCccccCCccccCcch
Q 027247 47 YEYPCPFCSEDFDLV--GLCCHIDEEHP----VEAKSGVCPVCVTRVTM 89 (226)
Q Consensus 47 ~~f~CPfC~e~~dv~--~L~~H~~~eH~----~e~~~vvCPVC~~~v~~ 89 (226)
..|.||.|.+.+... --|.|.-=..+ .......||+|...+..
T Consensus 14 ~~~~C~iC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 62 (115)
T 3l11_A 14 SECQCGICMEILVEPVTLPCNHTLCKPCFQSTVEKASLCCPFCRRRVSS 62 (115)
T ss_dssp HHHBCTTTCSBCSSCEECTTSCEECHHHHCCCCCTTTSBCTTTCCBCHH
T ss_pred CCCCCccCCcccCceeEcCCCCHHhHHHHHHHHhHCcCCCCCCCcccCc
Confidence 458999999855422 23555322111 12335789999988753
No 274
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=53.51 E-value=1.5 Score=28.99 Aligned_cols=41 Identities=20% Similarity=0.637 Sum_probs=24.8
Q ss_pred ceeeCCCCCCCccHh---------hhhhcccccCCCCC---ccccCCccccCc
Q 027247 47 YEYPCPFCSEDFDLV---------GLCCHIDEEHPVEA---KSGVCPVCVTRV 87 (226)
Q Consensus 47 ~~f~CPfC~e~~dv~---------~L~~H~~~eH~~e~---~~vvCPVC~~~v 87 (226)
..+.||.|.+.+... .-|.|.-=..+... +...||+|...+
T Consensus 14 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~ 66 (69)
T 2ea6_A 14 GTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKI 66 (69)
T ss_dssp CCCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHHHHHHCSSCTTTCCCC
T ss_pred CCCCCcccCccccccccccCCeEeCCCCChhcHHHHHHHHHcCCCCCCCCCcc
Confidence 568999999987754 22555422222211 245799997765
No 275
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=52.81 E-value=5.8 Score=22.69 Aligned_cols=24 Identities=33% Similarity=0.846 Sum_probs=17.2
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCC
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHP 72 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~ 72 (226)
.|.|+.|+..| ....|..|.. .|.
T Consensus 6 ~~~C~~C~k~f~~~~~L~~H~~-~H~ 30 (39)
T 1njq_A 6 SYTCSFCKREFRSAQALGGHMN-VHR 30 (39)
T ss_dssp SEECTTTCCEESSHHHHHHHHH-TTC
T ss_pred ceECCCCCcccCCHHHHHHHHH-HcC
Confidence 49999999955 5566778864 344
No 276
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=52.68 E-value=7 Score=22.96 Aligned_cols=21 Identities=24% Similarity=0.273 Sum_probs=14.0
Q ss_pred eeeCCCCCCCcc-Hhhhhhccc
Q 027247 48 EYPCPFCSEDFD-LVGLCCHID 68 (226)
Q Consensus 48 ~f~CPfC~e~~d-v~~L~~H~~ 68 (226)
.|.|+.|+..|. ...|..|..
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~ 33 (44)
T 2eou_A 12 TSECQECGKIFRHSSLLIEHQA 33 (44)
T ss_dssp CCCCTTTCCCCSSHHHHHHHHH
T ss_pred CeECCCCCcccCCHHHHHHHHH
Confidence 488888888554 455777753
No 277
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=52.47 E-value=6.3 Score=22.76 Aligned_cols=24 Identities=29% Similarity=0.643 Sum_probs=17.7
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCC
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHP 72 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~ 72 (226)
.|.|++|+..| ....|..|.. .|.
T Consensus 11 ~~~C~~C~k~f~~~~~L~~H~~-~H~ 35 (42)
T 2en2_A 11 PYKCETCGARFVQVAHLRAHVL-IHT 35 (42)
T ss_dssp SEECTTTCCEESSHHHHHHHTH-HHH
T ss_pred CEeCCCcChhhCCHHHHHHHHH-HcC
Confidence 59999999955 5677888864 443
No 278
>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}
Probab=52.26 E-value=5.8 Score=26.94 Aligned_cols=12 Identities=25% Similarity=0.803 Sum_probs=7.5
Q ss_pred eeeCCCCCCCcc
Q 027247 48 EYPCPFCSEDFD 59 (226)
Q Consensus 48 ~f~CPfC~e~~d 59 (226)
.|.|+.||--+|
T Consensus 3 ~y~C~~CGyvYd 14 (55)
T 2v3b_B 3 KWQCVVCGFIYD 14 (55)
T ss_dssp EEEETTTCCEEE
T ss_pred cEEeCCCCeEEC
Confidence 467777775444
No 279
>1yk4_A Rubredoxin, RD; electron transport; 0.69A {Pyrococcus abyssi} PDB: 2pya_A 1yk5_A 1bq8_A 1bq9_A* 3kyu_A 3kyv_A 3kyw_A 3kyx_A 3kyy_A 3ryg_A 3rz6_A 3rzt_A 3ss2_A 1brf_A 1caa_A 1cad_A 1vcx_A 1zrp_A 1iu5_A 1iu6_A ...
Probab=50.81 E-value=7 Score=26.24 Aligned_cols=11 Identities=27% Similarity=0.833 Sum_probs=5.8
Q ss_pred eeCCCCCCCcc
Q 027247 49 YPCPFCSEDFD 59 (226)
Q Consensus 49 f~CPfC~e~~d 59 (226)
|.|+.||--+|
T Consensus 3 ~~C~~CGyvYd 13 (52)
T 1yk4_A 3 LSCKICGYIYD 13 (52)
T ss_dssp EEESSSSCEEE
T ss_pred EEeCCCCeEEC
Confidence 55666654333
No 280
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=50.79 E-value=8.2 Score=22.30 Aligned_cols=25 Identities=36% Similarity=0.752 Sum_probs=18.3
Q ss_pred eeeCCCCCCCcc-HhhhhhcccccCCC
Q 027247 48 EYPCPFCSEDFD-LVGLCCHIDEEHPV 73 (226)
Q Consensus 48 ~f~CPfC~e~~d-v~~L~~H~~~eH~~ 73 (226)
.|.|+.|+..|. ...|..|+. .|..
T Consensus 11 ~~~C~~C~k~f~~~~~L~~H~~-~H~~ 36 (42)
T 2eos_A 11 PYPCEICGTRFRHLQTLKSHLR-IHTG 36 (42)
T ss_dssp CBCCSSSCCCBSSHHHHHHHTT-TTSC
T ss_pred CEECCCCCCccCCHHHHHHHHH-hcCC
Confidence 599999999655 567888864 4543
No 281
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=49.89 E-value=1.5 Score=32.09 Aligned_cols=42 Identities=19% Similarity=0.448 Sum_probs=25.5
Q ss_pred ceeeCCCCCCCccHhhh---hhcccccCCC----CCccccCCccccCcc
Q 027247 47 YEYPCPFCSEDFDLVGL---CCHIDEEHPV----EAKSGVCPVCVTRVT 88 (226)
Q Consensus 47 ~~f~CPfC~e~~dv~~L---~~H~~~eH~~----e~~~vvCPVC~~~v~ 88 (226)
..+.||.|.+.|..... |.|.-=..+. ......||+|...+.
T Consensus 21 ~~~~C~IC~~~~~~p~~~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~~ 69 (100)
T 3lrq_A 21 EVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQ 69 (100)
T ss_dssp HHTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHHHTCSBCTTTCCBCC
T ss_pred CCCCCccCCccccCccccCCCCChhhHHHHHHHHHHCcCCCCCCCCcCC
Confidence 67999999996654433 4453221111 111268999988765
No 282
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.54 E-value=7.8 Score=22.80 Aligned_cols=24 Identities=29% Similarity=0.455 Sum_probs=17.9
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCC
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHP 72 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~ 72 (226)
.|.|+.|+..| ....|..|.. .|.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~ 36 (44)
T 2epv_A 12 PYECNECGKAFIWKSLLIVHER-THA 36 (44)
T ss_dssp SEECSSSCCEESSHHHHHHHHG-GGS
T ss_pred CeECCCCCcccCchHHHHHHHh-Hhc
Confidence 59999999955 4677888874 354
No 283
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=49.36 E-value=2 Score=29.40 Aligned_cols=42 Identities=26% Similarity=0.510 Sum_probs=25.5
Q ss_pred ceeeCCCCCCCccHh----hh-hhcccccCCCCC---ccccCCccccCcc
Q 027247 47 YEYPCPFCSEDFDLV----GL-CCHIDEEHPVEA---KSGVCPVCVTRVT 88 (226)
Q Consensus 47 ~~f~CPfC~e~~dv~----~L-~~H~~~eH~~e~---~~vvCPVC~~~v~ 88 (226)
....||.|.+.|... .| |.|.-=.++... .+..||+|...+.
T Consensus 22 ~~~~C~IC~~~~~~~~~~~~l~C~H~fh~~Ci~~w~~~~~~CP~Cr~~~~ 71 (75)
T 1x4j_A 22 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADSG 71 (75)
T ss_dssp SCCEETTTTEECCBTCEEEEETTTEEEETTHHHHHHHHCSSCTTTCCCCC
T ss_pred CCCCCeECCcccCCCCeEEEECCCCHhHHHHHHHHHHcCCcCcCcCCcCC
Confidence 357899999866543 22 677533333221 3458999977654
No 284
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=48.28 E-value=4.9 Score=29.78 Aligned_cols=38 Identities=21% Similarity=0.141 Sum_probs=28.4
Q ss_pred ceeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCcccc
Q 027247 47 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVT 85 (226)
Q Consensus 47 ~~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC~~ 85 (226)
..|.|+.|+..| ....|..|....|..+ +.-.|.+|..
T Consensus 49 kpf~C~~Cgk~F~~~~~L~~H~~r~Htge-kpy~C~~~~~ 87 (102)
T 2ghf_A 49 SSYVCVECNFLTKRYDALSEHNLKYHPGE-ENFKLTMVKR 87 (102)
T ss_dssp CCEEETTTTEEESSTHHHHTHHHHTSTTC-CCEEEEECCC
T ss_pred CCcCCCCCCcccCCHHHHHHHHHHhcCCC-CCeeCCcccC
Confidence 359999999955 5677889955677654 5678988654
No 285
>2qgp_A HNH endonuclease; Q39X46, GMR87, X-RAY, NESG, structural genomics, PSI-2, protein structure initiative; 2.60A {Geobacter metallireducens gs-15}
Probab=47.86 E-value=4.6 Score=30.69 Aligned_cols=40 Identities=23% Similarity=0.316 Sum_probs=22.5
Q ss_pred ceeeCCCCCCCccHhhh-hhcccccC-----CCCCccccCCccccC
Q 027247 47 YEYPCPFCSEDFDLVGL-CCHIDEEH-----PVEAKSGVCPVCVTR 86 (226)
Q Consensus 47 ~~f~CPfC~e~~dv~~L-~~H~~~eH-----~~e~~~vvCPVC~~~ 86 (226)
..+.|+|||..++...+ +.|+.--- ..+.-..+|+-|...
T Consensus 34 ~~~~C~yCg~~~~~~~~~vDHIiP~s~gG~~~~~Nl~~lC~~CN~~ 79 (112)
T 2qgp_A 34 ARGICHYCGEIFPPEELTMDHLVPVVRGGKSTRGNVVPACKECNNR 79 (112)
T ss_dssp HHTBCTTTCCBCCGGGEEEEESSCTTTTCCCSTTTEEEEEHHHHHH
T ss_pred cCCcCCCCCCcCCCCCcEEEEEeehhcCCCCChhhChhhCHHHHHH
Confidence 45899999997764332 45553211 111223668888553
No 286
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=47.79 E-value=4.2 Score=26.40 Aligned_cols=35 Identities=20% Similarity=0.449 Sum_probs=22.7
Q ss_pred ceeeCCCCCC-CccHhhhhhcccccCCCCCccccCCccccCcchhhH
Q 027247 47 YEYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMV 92 (226)
Q Consensus 47 ~~f~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vvCPVC~~~v~~d~i 92 (226)
..+.||.|+. .+.. ..+....||+.|-.-+..+.|
T Consensus 4 ~~~~CP~C~~~~l~~-----------d~~~gelvC~~CG~v~~e~~i 39 (50)
T 1pft_A 4 KQKVCPACESAELIY-----------DPERGEIVCAKCGYVIEENII 39 (50)
T ss_dssp SCCSCTTTSCCCEEE-----------ETTTTEEEESSSCCBCCCCCC
T ss_pred ccEeCcCCCCcceEE-----------cCCCCeEECcccCCccccccc
Confidence 4689999987 4321 124556899999776655444
No 287
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=47.11 E-value=7.7 Score=22.29 Aligned_cols=24 Identities=25% Similarity=0.505 Sum_probs=17.6
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCC
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHP 72 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~ 72 (226)
.|.|++|+..| ....|..|.. .|.
T Consensus 11 ~~~C~~C~k~f~~~~~l~~H~~-~H~ 35 (42)
T 2epc_A 11 PYLCGQCGKSFTQRGSLAVHQR-SCS 35 (42)
T ss_dssp CEECSSSCCEESSHHHHHHHHH-HTT
T ss_pred CeECCCCCcccCCHHHHHHHhh-hcC
Confidence 59999999955 5677888864 444
No 288
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.77 E-value=6.4 Score=23.29 Aligned_cols=32 Identities=19% Similarity=0.329 Sum_probs=20.5
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCC
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCP 81 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCP 81 (226)
.|.|++|+..| ....|..|.. .|..+ +.-.||
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~~~-~~~~C~ 44 (46)
T 2en3_A 12 PFQCKECGMNFSWSCSLFKHLR-SHERT-DPSGPS 44 (46)
T ss_dssp SEECSSSCCEESSSHHHHHHHH-HHHHS-CCSSCS
T ss_pred CeeCcccChhhCCHHHHHHHHH-HhCCC-CCCCCC
Confidence 59999999955 4577888864 34332 334444
No 289
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=46.71 E-value=2.4 Score=33.57 Aligned_cols=43 Identities=21% Similarity=0.353 Sum_probs=25.0
Q ss_pred ceeeCCCCCCCccHh--hhhhcccccCCC----CCccccCCccccCcch
Q 027247 47 YEYPCPFCSEDFDLV--GLCCHIDEEHPV----EAKSGVCPVCVTRVTM 89 (226)
Q Consensus 47 ~~f~CPfC~e~~dv~--~L~~H~~~eH~~----e~~~vvCPVC~~~v~~ 89 (226)
..+.||.|.+.|... --|-|.--..+. ......||+|...+..
T Consensus 77 ~~~~C~IC~~~~~~pv~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 125 (150)
T 1z6u_A 77 QSFMCVCCQELVYQPVTTECFHNVCKDCLQRSFKAQVFSCPACRHDLGQ 125 (150)
T ss_dssp HHTBCTTTSSBCSSEEECTTSCEEEHHHHHHHHHTTCCBCTTTCCBCCT
T ss_pred cCCEeecCChhhcCCEEcCCCCchhHHHHHHHHHhCCCcCCCCCccCCC
Confidence 579999999855432 234442211111 1234589999887664
No 290
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=46.37 E-value=7.1 Score=23.32 Aligned_cols=21 Identities=29% Similarity=0.581 Sum_probs=12.2
Q ss_pred ceeeCCCCCC-CccHhhhhhcc
Q 027247 47 YEYPCPFCSE-DFDLVGLCCHI 67 (226)
Q Consensus 47 ~~f~CPfC~e-~~dv~~L~~H~ 67 (226)
+.|.||.|.. -=|...|..|.
T Consensus 2 ~k~~CpvCk~q~Pd~kt~~~H~ 23 (28)
T 2jvx_A 2 SDFCCPKCQYQAPDMDTLQIHV 23 (28)
T ss_dssp CCEECTTSSCEESSHHHHHHHH
T ss_pred CcccCccccccCcChHHHHHHH
Confidence 3466666666 55555555554
No 291
>2czr_A TBP-interacting protein; tata-binding protein (TBP), hyperthermophilic archaeon, Zn-finger motif, transcription; 2.30A {Thermococcus kodakarensis} SCOP: c.52.4.1
Probab=46.27 E-value=6.5 Score=33.62 Aligned_cols=28 Identities=29% Similarity=0.519 Sum_probs=23.5
Q ss_pred ccCcceeeCCCCCCCccHhhhhhcccccCCC
Q 027247 43 VKGEYEYPCPFCSEDFDLVGLCCHIDEEHPV 73 (226)
Q Consensus 43 ~~~~~~f~CPfC~e~~dv~~L~~H~~~eH~~ 73 (226)
.| +-|+|-.||+-+|+..|..|+ ..|--
T Consensus 151 FW--QFYKCe~CgKYvDId~~~~Hl-k~Hg~ 178 (226)
T 2czr_A 151 FW--QFYKCEECGKYVDIENLEAHL-REHGI 178 (226)
T ss_dssp EE--EEEECTTTCCEEEGGGHHHHH-HTTTC
T ss_pred EE--EEEehhhcCceecHHHHHHHH-HHcCc
Confidence 46 899999999999999999998 44443
No 292
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=45.38 E-value=4 Score=28.20 Aligned_cols=41 Identities=32% Similarity=0.553 Sum_probs=23.7
Q ss_pred ceeeCCCCCCCcc-Hhh-hhhcc-cccCCCCCccccCCccccCcc
Q 027247 47 YEYPCPFCSEDFD-LVG-LCCHI-DEEHPVEAKSGVCPVCVTRVT 88 (226)
Q Consensus 47 ~~f~CPfC~e~~d-v~~-L~~H~-~~eH~~e~~~vvCPVC~~~v~ 88 (226)
..+.||.|.+.+. ... =|.|. -=..+... ...||+|...+.
T Consensus 23 ~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~-~~~CP~Cr~~i~ 66 (74)
T 4ic3_A 23 EEKLCKICMDRNIAIVFVPCGHLVTCKQCAEA-VDKCPMCYTVIT 66 (74)
T ss_dssp HHTBCTTTSSSBCCEEEETTCCBCCCHHHHTT-CSBCTTTCCBCS
T ss_pred cCCCCCCCCCCCCCEEEcCCCChhHHHHhhhc-CccCCCcCcCcc
Confidence 5789999999443 333 24443 11111111 178999987664
No 293
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=45.18 E-value=8.6 Score=23.84 Aligned_cols=22 Identities=23% Similarity=0.483 Sum_probs=16.6
Q ss_pred ceeeCCCCCCCc-cHhhhhhccc
Q 027247 47 YEYPCPFCSEDF-DLVGLCCHID 68 (226)
Q Consensus 47 ~~f~CPfC~e~~-dv~~L~~H~~ 68 (226)
..|.|+.|+..| ....|..|..
T Consensus 23 k~~~C~~C~k~f~~~~~L~~H~~ 45 (54)
T 1yui_A 23 QPATCPICYAVIRQSRNLRRHLE 45 (54)
T ss_dssp CCEECTTTCCEESSHHHHHHHHH
T ss_pred CCccCCCCCcccCCHHHHHHHHH
Confidence 359999999955 4567778864
No 294
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=45.14 E-value=9.9 Score=26.73 Aligned_cols=29 Identities=24% Similarity=0.434 Sum_probs=21.9
Q ss_pred ceeeCCCCCCCccHhhhhhcccccCCCCCccccCCccccCc
Q 027247 47 YEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRV 87 (226)
Q Consensus 47 ~~f~CPfC~e~~dv~~L~~H~~~eH~~e~~~vvCPVC~~~v 87 (226)
-.|.|.-|+.++++. ....+.||-|..+|
T Consensus 20 v~Y~C~~Cg~~~~l~------------~~~~iRC~~CG~RI 48 (63)
T 3h0g_L 20 MIYLCADCGARNTIQ------------AKEVIRCRECGHRV 48 (63)
T ss_dssp CCCBCSSSCCBCCCC------------SSSCCCCSSSCCCC
T ss_pred eEEECCCCCCeeecC------------CCCceECCCCCcEE
Confidence 469999999988744 13458999996655
No 295
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=44.74 E-value=6 Score=29.43 Aligned_cols=12 Identities=25% Similarity=0.766 Sum_probs=9.2
Q ss_pred eeCCCCCCCccH
Q 027247 49 YPCPFCSEDFDL 60 (226)
Q Consensus 49 f~CPfC~e~~dv 60 (226)
=+||.||..++-
T Consensus 48 ~~CPvCgs~l~~ 59 (112)
T 1l8d_A 48 GKCPVCGRELTD 59 (112)
T ss_dssp EECTTTCCEECH
T ss_pred CCCCCCCCcCCH
Confidence 479999987663
No 296
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=43.16 E-value=5.1 Score=29.61 Aligned_cols=45 Identities=16% Similarity=0.263 Sum_probs=25.9
Q ss_pred ccCcceeeCCCCCCCccHhh--hhhcccccCCC----CCccccCCccccCcch
Q 027247 43 VKGEYEYPCPFCSEDFDLVG--LCCHIDEEHPV----EAKSGVCPVCVTRVTM 89 (226)
Q Consensus 43 ~~~~~~f~CPfC~e~~dv~~--L~~H~~~eH~~----e~~~vvCPVC~~~v~~ 89 (226)
+. ..|.||.|.+.+.... -|.|.-=..+. ......||+|...+..
T Consensus 20 ~~--~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 70 (116)
T 1rmd_A 20 FV--KSISCQICEHILADPVETSCKHLFCRICILRCLKVMGSYCPSCRYPCFP 70 (116)
T ss_dssp HH--HHTBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHTCSBCTTTCCBCCG
T ss_pred cc--CCCCCCCCCcHhcCcEEcCCCCcccHHHHHHHHhHCcCcCCCCCCCCCH
Confidence 55 6799999999554332 23332111111 1124579999887764
No 297
>1dl6_A Transcription factor II B (TFIIB); zinc ribbon, gene regulation; NMR {Homo sapiens} SCOP: g.41.3.1 PDB: 1rly_A 1ro4_A
Probab=42.73 E-value=5.9 Score=26.96 Aligned_cols=36 Identities=25% Similarity=0.435 Sum_probs=24.3
Q ss_pred ceeeCCCCCC-CccHhhhhhcccccCCCCCccccCCccccCcchhhHh
Q 027247 47 YEYPCPFCSE-DFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVD 93 (226)
Q Consensus 47 ~~f~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vvCPVC~~~v~~d~i~ 93 (226)
....||.|+. .+. .. ++...+||..|-.-+..+.|.
T Consensus 10 ~~~~Cp~C~~~~lv---------~D--~~~ge~vC~~CGlVl~e~~iD 46 (58)
T 1dl6_A 10 PRVTCPNHPDAILV---------ED--YRAGDMICPECGLVVGDRVID 46 (58)
T ss_dssp SCCSBTTBSSSCCE---------EC--SSSCCEECTTTCCEECCSCCC
T ss_pred ccccCcCCCCCcee---------Ee--CCCCeEEeCCCCCEEeccccc
Confidence 3458999987 421 11 255679999998777766654
No 298
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=42.56 E-value=9 Score=25.71 Aligned_cols=32 Identities=25% Similarity=0.454 Sum_probs=18.5
Q ss_pred ceeeCCCCCCCccHhhhhhcccccCCCCCccccCCccccCc
Q 027247 47 YEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRV 87 (226)
Q Consensus 47 ~~f~CPfC~e~~dv~~L~~H~~~eH~~e~~~vvCPVC~~~v 87 (226)
..|.|=-||..|+..+|-- --.+.||+|.-++
T Consensus 2 ~iY~C~rCg~~fs~~el~~---------lP~IrCpyCGyri 33 (48)
T 4ayb_P 2 AVYRCGKCWKTFTDEQLKV---------LPGVRCPYCGYKI 33 (48)
T ss_dssp ---CCCCTTTTCCCCCSCC---------CSSSCCTTTCCSC
T ss_pred cEEEeeccCCCccHHHHhh---------CCCcccCccCcEE
Confidence 3577777877777766631 1236688886654
No 299
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=42.55 E-value=1.4 Score=29.45 Aligned_cols=43 Identities=19% Similarity=0.600 Sum_probs=25.3
Q ss_pred ceeeCCCCCCCccHh---------hhhhcccccCCCC---CccccCCccccCcch
Q 027247 47 YEYPCPFCSEDFDLV---------GLCCHIDEEHPVE---AKSGVCPVCVTRVTM 89 (226)
Q Consensus 47 ~~f~CPfC~e~~dv~---------~L~~H~~~eH~~e---~~~vvCPVC~~~v~~ 89 (226)
..+.||.|.+.+... .-|.|.-=..+.. .....||+|...+..
T Consensus 9 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 63 (71)
T 3ng2_A 9 GTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINH 63 (71)
T ss_dssp TCCBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHHHHHCSBCTTTCCBCCC
T ss_pred CCCCCcccChhhhccccccCCeEeCCCCChHhHHHHHHHHHcCCCCCCCCCccCh
Confidence 458899999987653 2255532111111 123589999877653
No 300
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=41.80 E-value=10 Score=27.87 Aligned_cols=37 Identities=16% Similarity=0.454 Sum_probs=25.3
Q ss_pred ceeeCCCCCCCccHhhhhhcccccCCCCCccccCCccccCcc
Q 027247 47 YEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT 88 (226)
Q Consensus 47 ~~f~CPfC~e~~dv~~L~~H~~~eH~~e~~~vvCPVC~~~v~ 88 (226)
....||.|...++...+..- ........||||-..+.
T Consensus 47 ~~~~CP~Cr~~~~~~~l~~l-----~i~~~~~~C~iC~~~~~ 83 (133)
T 4ap4_A 47 NANTCPTCRKKINHKRYHPI-----YIGSGTVSCPICMDGYS 83 (133)
T ss_dssp TCSBCTTTCCBCTTTCEEEC-----BCSSSSCBCTTTCCBHH
T ss_pred hCCCCCCCCCcCcccccccc-----ccCCCCCCCCCCCCccc
Confidence 34689999998877665431 22455678999977553
No 301
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=41.60 E-value=7.2 Score=27.44 Aligned_cols=25 Identities=32% Similarity=0.670 Sum_probs=20.0
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCC
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHP 72 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~ 72 (226)
.|.|++|+..| ....|..|+...|.
T Consensus 54 ~~~C~~C~k~F~~~~~L~~H~~~h~~ 79 (98)
T 2gqj_A 54 ALKCQHCRKQFKSKAGLNYHTMAEHS 79 (98)
T ss_dssp HHSCSSSCCCCSCHHHHHHHHHHHSC
T ss_pred CEECCCCCCccCCHHHHHHHHHHHcC
Confidence 59999999955 56789999876664
No 302
>3a43_A HYPD, hydrogenase nickel incorporation protein HYPA; [NIFE] hydrogenase maturation, zinc-finger, nickel binding, metal-binding; HET: FME; 2.30A {Pyrococcus kodakaraensis} PDB: 3a44_A*
Probab=41.40 E-value=12 Score=29.56 Aligned_cols=16 Identities=19% Similarity=0.540 Sum_probs=13.4
Q ss_pred ceeeCCCCCCCccHhh
Q 027247 47 YEYPCPFCSEDFDLVG 62 (226)
Q Consensus 47 ~~f~CPfC~e~~dv~~ 62 (226)
..+.|+-||..+....
T Consensus 69 ~~~~C~~CG~~~~~~~ 84 (139)
T 3a43_A 69 AVFKCRNCNYEWKLKE 84 (139)
T ss_dssp CEEEETTTCCEEEGGG
T ss_pred CcEECCCCCCEEeccc
Confidence 5799999999887755
No 303
>2akl_A PHNA-like protein PA0128; two domains, Zn binding protein, beta-strand protein, structural genomics, PSI; NMR {Pseudomonas aeruginosa PAO1} SCOP: b.34.11.2 g.41.3.5
Probab=41.38 E-value=9.2 Score=30.82 Aligned_cols=26 Identities=31% Similarity=0.832 Sum_probs=17.8
Q ss_pred eeeCCCCCCCccHhhhhhcccccCCCCCccccCCcccc
Q 027247 48 EYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVT 85 (226)
Q Consensus 48 ~f~CPfC~e~~dv~~L~~H~~~eH~~e~~~vvCPVC~~ 85 (226)
.-+||.|+.++.- .+....|||-|+.
T Consensus 27 lP~CP~C~seytY------------eDg~l~vCPeC~h 52 (138)
T 2akl_A 27 LPPCPQCNSEYTY------------EDGALLVCPECAH 52 (138)
T ss_dssp SCCCTTTCCCCCE------------ECSSSEEETTTTE
T ss_pred CCCCCCCCCcceE------------ecCCeEECCcccc
Confidence 4589999875532 1344579999965
No 304
>1wir_A Protein arginine N-methyltransferase 3; C2H2 zinc finger domain, PRMT3, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.37.1.5
Probab=41.25 E-value=9.9 Score=29.80 Aligned_cols=31 Identities=13% Similarity=0.159 Sum_probs=24.9
Q ss_pred CCCccccCCccccCc--chhhHhhhhhcccccc
Q 027247 73 VEAKSGVCPVCVTRV--TMDMVDHITTQHGNIS 103 (226)
Q Consensus 73 ~e~~~vvCPVC~~~v--~~d~i~Hl~~qH~~~~ 103 (226)
-+...++|..|...- ...++.|+..+|++=|
T Consensus 11 ~e~~~~~CLFCd~~~~s~~~~l~H~k~~H~FD~ 43 (121)
T 1wir_A 11 HGRQHTPCLFCDRLFASAEETFSHCKLEHQFNI 43 (121)
T ss_dssp CCCCCEECSSSCCEESSHHHHHHHHHHSSCCCH
T ss_pred CCCCceeEecCCCcccCHHHHHHHHHHhcCCCH
Confidence 345679999998763 4689999999999844
No 305
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=41.25 E-value=3.9 Score=25.83 Aligned_cols=41 Identities=27% Similarity=0.486 Sum_probs=22.6
Q ss_pred ceeeCCCCCCCccH-----h-hhhhcccccCCCC---CccccCCccccCc
Q 027247 47 YEYPCPFCSEDFDL-----V-GLCCHIDEEHPVE---AKSGVCPVCVTRV 87 (226)
Q Consensus 47 ~~f~CPfC~e~~dv-----~-~L~~H~~~eH~~e---~~~vvCPVC~~~v 87 (226)
..+.||.|.+.+.. . .-|.|.-=.++.. .....||+|...+
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~ 53 (55)
T 2ecm_A 4 GSSGCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEGYRCPLCSGPS 53 (55)
T ss_dssp CCCSCTTTCCCCCTTTSCEEECTTSCEEETTHHHHHHHHTCCCTTSCCSS
T ss_pred CCCcCcccChhhcCCCcCeEecCCCCcccHHHHHHHHHcCCcCCCCCCcC
Confidence 35789999987632 1 1255532222221 1126799997654
No 306
>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=41.11 E-value=13 Score=25.57 Aligned_cols=35 Identities=29% Similarity=0.315 Sum_probs=21.6
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCcccc
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVT 85 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC~~ 85 (226)
-|.|+.|++.| ....|..|... |..+ ...|-+|..
T Consensus 13 py~C~~CgK~F~~~s~L~~H~r~-Htg~--~~~~~~~~~ 48 (66)
T 2epp_A 13 ILPCGLCGKVFTDANRLRQHEAQ-HGVT--SLQLGYIDL 48 (66)
T ss_dssp CCCCTTTCCCCSCHHHHHHHHHH-HTTT--SCCCCSCCC
T ss_pred CcCCCCCCCccCCHHHHHhhhhh-hCCC--ccccccccC
Confidence 48899999855 45667788643 5443 234555543
No 307
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=41.11 E-value=6.6 Score=35.54 Aligned_cols=41 Identities=22% Similarity=0.552 Sum_probs=26.8
Q ss_pred ceeeCCCCCC-CccHhhh-hhcc-cccCCCCCccccCCccccCcc
Q 027247 47 YEYPCPFCSE-DFDLVGL-CCHI-DEEHPVEAKSGVCPVCVTRVT 88 (226)
Q Consensus 47 ~~f~CPfC~e-~~dv~~L-~~H~-~~eH~~e~~~vvCPVC~~~v~ 88 (226)
..+.||.|.+ -.+...| |.|. -=..+... ...||+|...+.
T Consensus 294 ~~~~C~IC~~~~~~~v~lpCgH~~fC~~C~~~-~~~CP~CR~~i~ 337 (345)
T 3t6p_A 294 EERTCKVCMDKEVSVVFIPCGHLVVCQECAPS-LRKCPICRGIIK 337 (345)
T ss_dssp TTCBCTTTSSSBCCEEEETTCCEEECTTTGGG-CSBCTTTCCBCC
T ss_pred CCCCCCccCCcCCceEEcCCCChhHhHHHHhc-CCcCCCCCCCcc
Confidence 5799999999 4444443 6676 33333332 268999987664
No 308
>3o9x_A Uncharacterized HTH-type transcriptional regulato; HTH-XRE DNA binding motif, transcriptional regulator, bacter antitoxin, Zn binding protein, transcription regulator-DNA; HET: DNA; 2.10A {Escherichia coli} PDB: 3gn5_A* 3gn5_B* 2kz8_A
Probab=39.76 E-value=4.7 Score=30.34 Aligned_cols=39 Identities=15% Similarity=0.290 Sum_probs=19.9
Q ss_pred eCCCCCCCccHhhhhhccccc----CCCCC-ccccCCccccCcc
Q 027247 50 PCPFCSEDFDLVGLCCHIDEE----HPVEA-KSGVCPVCVTRVT 88 (226)
Q Consensus 50 ~CPfC~e~~dv~~L~~H~~~e----H~~e~-~~vvCPVC~~~v~ 88 (226)
.||+|+.+.-+..-.....+. -.++. ..-+|+.|...+.
T Consensus 4 ~Cp~Cg~~~~~~~~~~~~~~~kg~~~~v~~v~~~~C~~CGE~~~ 47 (133)
T 3o9x_A 4 KCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIM 47 (133)
T ss_dssp BCTTTSSSBEEEEEEEEEEEETTEEEEEEEEEEEEESSSSCEEC
T ss_pred CCCcCCCCceeeceEEEEEEECCEEEEECCCceeECCCCCCEee
Confidence 699999853222222111111 11122 3467999988654
No 309
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=39.64 E-value=2.7 Score=30.63 Aligned_cols=43 Identities=26% Similarity=0.485 Sum_probs=24.9
Q ss_pred ceeeCCCCCCCccHh--hhhhcccccCCC-----C-CccccCCccccCcch
Q 027247 47 YEYPCPFCSEDFDLV--GLCCHIDEEHPV-----E-AKSGVCPVCVTRVTM 89 (226)
Q Consensus 47 ~~f~CPfC~e~~dv~--~L~~H~~~eH~~-----e-~~~vvCPVC~~~v~~ 89 (226)
..+.||.|.+.+... --|.|.-=..+. . .....||+|...+..
T Consensus 20 ~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 70 (112)
T 1jm7_A 20 KILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITK 70 (112)
T ss_dssp HHTSCSSSCCCCSSCCBCTTSCCCCSHHHHHHHHSSSSSCCCTTTSCCCCT
T ss_pred CCCCCcccChhhcCeEECCCCCHHHHHHHHHHHHhCCCCCCCcCCCCcCCH
Confidence 578999999955432 224453222221 1 223589999887653
No 310
>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*
Probab=38.75 E-value=9.3 Score=32.45 Aligned_cols=24 Identities=33% Similarity=0.627 Sum_probs=20.5
Q ss_pred ceeeCCCCCCCc--cHhhhhhccccc
Q 027247 47 YEYPCPFCSEDF--DLVGLCCHIDEE 70 (226)
Q Consensus 47 ~~f~CPfC~e~~--dv~~L~~H~~~e 70 (226)
..+.|+.|+..| .+..|..|++++
T Consensus 168 ~~L~C~~C~~~f~n~~~~LK~HL~~e 193 (204)
T 3sp4_A 168 EDLKCWRCGETFGRHFTKLKAHLQEE 193 (204)
T ss_dssp SCCBCTTTCCBCTTCHHHHHHHHHHH
T ss_pred CCceeCCCCchhhcccHHHHHHHHHH
Confidence 578999999987 399999999654
No 311
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=38.73 E-value=7.3 Score=22.79 Aligned_cols=24 Identities=29% Similarity=0.613 Sum_probs=17.4
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCC
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHP 72 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~ 72 (226)
.|.|+.|+..| ....|..|.. .|.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~ 36 (44)
T 2eox_A 12 SYNCNECGKAFTRIFHLTRHQK-IHT 36 (44)
T ss_dssp CEEETTTTEEESSSHHHHTTHH-HHC
T ss_pred CeECcccCcccCCHHHHHHHHH-HhC
Confidence 59999999954 5567778864 343
No 312
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=37.74 E-value=4.9 Score=28.38 Aligned_cols=42 Identities=29% Similarity=0.487 Sum_probs=25.8
Q ss_pred ceeeCCCCCC-CccHhhh-hhcc-cccCCCCCccccCCccccCcch
Q 027247 47 YEYPCPFCSE-DFDLVGL-CCHI-DEEHPVEAKSGVCPVCVTRVTM 89 (226)
Q Consensus 47 ~~f~CPfC~e-~~dv~~L-~~H~-~~eH~~e~~~vvCPVC~~~v~~ 89 (226)
....|+.|.+ ..+...| |-|. -=..+... ...||+|...+..
T Consensus 17 ~~~~C~IC~~~~~~~v~~pCgH~~~C~~C~~~-~~~CP~Cr~~i~~ 61 (79)
T 2yho_A 17 EAMLCMVCCEEEINSTFCPCGHTVCCESCAAQ-LQSCPVCRSRVEH 61 (79)
T ss_dssp HHTBCTTTSSSBCCEEEETTCBCCBCHHHHTT-CSBCTTTCCBCCE
T ss_pred CCCEeEEeCcccCcEEEECCCCHHHHHHHHHh-cCcCCCCCchhhC
Confidence 5678999999 5555544 6665 21222222 2389999887653
No 313
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=37.68 E-value=4.1 Score=28.60 Aligned_cols=24 Identities=21% Similarity=0.508 Sum_probs=13.2
Q ss_pred hhcccccCCCC---CccccCCccccCc
Q 027247 64 CCHIDEEHPVE---AKSGVCPVCVTRV 87 (226)
Q Consensus 64 ~~H~~~eH~~e---~~~vvCPVC~~~v 87 (226)
|.|.-=.++.. .+...||+|...+
T Consensus 48 C~H~FH~~Ci~~Wl~~~~~CP~CR~~~ 74 (81)
T 2ecl_A 48 CNHSFHNCCMSLWVKQNNRCPLCQQDW 74 (81)
T ss_dssp TSCEEEHHHHHHHTTTCCBCTTTCCBC
T ss_pred CCCccChHHHHHHHHhCCCCCCcCCCc
Confidence 66653333321 2335899997654
No 314
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=37.17 E-value=4.1 Score=30.69 Aligned_cols=37 Identities=24% Similarity=0.534 Sum_probs=22.5
Q ss_pred eCCCCCCCccHh--------------------hhhhcccccCCCCC---ccccCCccccC
Q 027247 50 PCPFCSEDFDLV--------------------GLCCHIDEEHPVEA---KSGVCPVCVTR 86 (226)
Q Consensus 50 ~CPfC~e~~dv~--------------------~L~~H~~~eH~~e~---~~vvCPVC~~~ 86 (226)
.|+.|.+.|+.. .-|.|.--.|+... .+..||+|...
T Consensus 39 ~CaIC~~~~~~~c~~C~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~~~CP~Cr~~ 98 (106)
T 3dpl_R 39 NCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNRE 98 (106)
T ss_dssp CCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHTTCSBCSSSCSB
T ss_pred CCccCChhHhCcCchhhccccccCCccceEeecccCcEECHHHHHHHHHcCCcCcCCCCc
Confidence 588887776643 23566544444422 35679999664
No 315
>3pih_A Uvrabc system protein A; hydrolase, ABC ATPase, DNA repair, nucleotide excision repai hydrolase-DNA complex; HET: DNA; 2.90A {Thermotoga maritima}
Probab=37.01 E-value=14 Score=37.67 Aligned_cols=34 Identities=24% Similarity=0.528 Sum_probs=22.7
Q ss_pred ceeeCCCCCCCccHhhhhhcccccCCCCCccccCCcccc
Q 027247 47 YEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVT 85 (226)
Q Consensus 47 ~~f~CPfC~e~~dv~~L~~H~~~eH~~e~~~vvCPVC~~ 85 (226)
..|.||.||..|...+-. .-.|.+..+.||.|.-
T Consensus 248 ~~~~c~~~~~~~~~~~~~-----~fsfn~p~g~C~~C~G 281 (916)
T 3pih_A 248 ENLMCPVCGIGFPEITPK-----LFSFNSPYGACPNCHG 281 (916)
T ss_dssp SSCBCTTTCCCCCCCSGG-----GGCTTSTTTBCTTTTT
T ss_pred ccccCcccCCccCCCCHh-----hcCCCCCCCcCCeeec
Confidence 569999999765543321 1234556799999965
No 316
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=36.71 E-value=7 Score=30.02 Aligned_cols=54 Identities=22% Similarity=0.312 Sum_probs=30.6
Q ss_pred eeCCCCCCCccHhhhhhcccccCCCCCccccCCccccCcc-------hhhHhhhhhccccccccc
Q 027247 49 YPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT-------MDMVDHITTQHGNISNSW 106 (226)
Q Consensus 49 f~CPfC~e~~dv~~L~~H~~~eH~~e~~~vvCPVC~~~v~-------~d~i~Hl~~qH~~~~K~~ 106 (226)
-.||-|..+++..+=.-||..=+..=.+.+.||-|...+- .|+.- +|++-+|++
T Consensus 33 ~~CP~Cq~eL~~~g~~~hC~~C~~~f~~~a~CPdC~q~LevLkACGAvdYFC----~~chgLiSK 93 (101)
T 2jne_A 33 LHCPQCQHVLDQDNGHARCRSCGEFIEMKALCPDCHQPLQVLKACGAVDYFC----QHGHGLISK 93 (101)
T ss_dssp CBCSSSCSBEEEETTEEEETTTCCEEEEEEECTTTCSBCEEEEETTEEEEEE----TTTTEEECT
T ss_pred ccCccCCCcceecCCEEECccccchhhccccCcchhhHHHHHHHhcCcchhh----ccCCceeec
Confidence 5677777766554433334332222345578999988653 34432 466767653
No 317
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=35.55 E-value=21 Score=18.79 Aligned_cols=20 Identities=25% Similarity=0.602 Sum_probs=14.3
Q ss_pred eeCC--CCCCCc-cHhhhhhccc
Q 027247 49 YPCP--FCSEDF-DLVGLCCHID 68 (226)
Q Consensus 49 f~CP--fC~e~~-dv~~L~~H~~ 68 (226)
|.|+ .|+..| ....|..|..
T Consensus 3 ~~C~~~~C~k~f~~~~~L~~H~~ 25 (31)
T 1sp2_A 3 FMCTWSYCGKRFTRSDELQRHKR 25 (31)
T ss_dssp CBCCSTTCCCBCSSHHHHHHHHT
T ss_pred cCCcCCCCCcccCCHhHHHHHHH
Confidence 7887 899855 4567777763
No 318
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=34.99 E-value=6.8 Score=29.18 Aligned_cols=43 Identities=21% Similarity=0.354 Sum_probs=24.8
Q ss_pred ceeeCCCCCCCccHh--hhhhcccccCCC----CCccccCCccccCcch
Q 027247 47 YEYPCPFCSEDFDLV--GLCCHIDEEHPV----EAKSGVCPVCVTRVTM 89 (226)
Q Consensus 47 ~~f~CPfC~e~~dv~--~L~~H~~~eH~~----e~~~vvCPVC~~~v~~ 89 (226)
..|.||.|.+.+... .-|.|.-=..+. ......||+|...+..
T Consensus 17 ~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 65 (118)
T 3hct_A 17 SKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLE 65 (118)
T ss_dssp GGGBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHHCSBCTTTCCBCCG
T ss_pred CCCCCCcCChhhcCeEECCcCChhhHHHHHHHHhhCCCCCCCCCCCcCH
Confidence 679999999955433 224443211111 1122389999887653
No 319
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=34.70 E-value=8.2 Score=29.78 Aligned_cols=37 Identities=24% Similarity=0.534 Sum_probs=0.0
Q ss_pred eCCCCCCCccHh--------------------hhhhcccccCCCCC---ccccCCccccC
Q 027247 50 PCPFCSEDFDLV--------------------GLCCHIDEEHPVEA---KSGVCPVCVTR 86 (226)
Q Consensus 50 ~CPfC~e~~dv~--------------------~L~~H~~~eH~~e~---~~vvCPVC~~~ 86 (226)
.|+.|-++|+.. .-|.|.--.|+... .+..||+|...
T Consensus 50 ~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~Wl~~~~~CP~Cr~~ 109 (117)
T 4a0k_B 50 NCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNRE 109 (117)
T ss_dssp ------------------------------------------------------------
T ss_pred cCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHHHHHcCCcCCCCCCe
Confidence 688888877642 14778777777644 35689999654
No 320
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=34.03 E-value=7.5 Score=25.63 Aligned_cols=41 Identities=27% Similarity=0.468 Sum_probs=24.4
Q ss_pred eeeCCCCCCCccH---hhhhhcccccCCCC---CccccCCccccCcc
Q 027247 48 EYPCPFCSEDFDL---VGLCCHIDEEHPVE---AKSGVCPVCVTRVT 88 (226)
Q Consensus 48 ~f~CPfC~e~~dv---~~L~~H~~~eH~~e---~~~vvCPVC~~~v~ 88 (226)
...||.|.+.+.. ..-|.|.-=..+.. .+...||+|...+.
T Consensus 5 ~~~C~IC~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~ 51 (68)
T 1chc_A 5 AERCPICLEDPSNYSMALPCLHAFCYVCITRWIRQNPTCPLCKVPVE 51 (68)
T ss_dssp CCCCSSCCSCCCSCEEETTTTEEESTTHHHHHHHHSCSTTTTCCCCC
T ss_pred CCCCeeCCccccCCcEecCCCCeeHHHHHHHHHhCcCcCcCCChhhH
Confidence 4689999996643 23366653222221 12357999987664
No 321
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=33.64 E-value=5.3 Score=31.28 Aligned_cols=40 Identities=20% Similarity=0.423 Sum_probs=23.6
Q ss_pred ceeeCCCCCCCccH--hhhhhcccccCC----CCCccccCCccccC
Q 027247 47 YEYPCPFCSEDFDL--VGLCCHIDEEHP----VEAKSGVCPVCVTR 86 (226)
Q Consensus 47 ~~f~CPfC~e~~dv--~~L~~H~~~eH~----~e~~~vvCPVC~~~ 86 (226)
..|.||.|.+-+.. ..-|.|.-=..+ .......||+|...
T Consensus 30 ~~~~C~IC~~~~~~pv~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~~ 75 (141)
T 3knv_A 30 AKYLCSACRNVLRRPFQAQCGHRYCSFCLASILSSGPQNCAACVHE 75 (141)
T ss_dssp GGGBCTTTCSBCSSEEECTTSCEEEHHHHHHHGGGSCEECHHHHHT
T ss_pred cCcCCCCCChhhcCcEECCCCCccCHHHHHHHHhcCCCCCCCCCCc
Confidence 67999999985542 233445321111 12344689999764
No 322
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=33.61 E-value=16 Score=25.98 Aligned_cols=26 Identities=23% Similarity=0.648 Sum_probs=20.6
Q ss_pred eeeCCCCCCCcc-HhhhhhcccccCCC
Q 027247 48 EYPCPFCSEDFD-LVGLCCHIDEEHPV 73 (226)
Q Consensus 48 ~f~CPfC~e~~d-v~~L~~H~~~eH~~ 73 (226)
.|.|+.|+..|. ...|..|+...|..
T Consensus 62 ~~~C~~Cgk~F~~~~~L~~H~~~~H~~ 88 (96)
T 2ctd_A 62 MFTCHHCGKQLRSLAGMKYHVMANHNS 88 (96)
T ss_dssp CCCCSSSCCCCSSHHHHHHHHHHHTCC
T ss_pred CeECCCCCCeeCCHHHHHHHhHHhcCC
Confidence 599999999764 57899996677753
No 323
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=32.96 E-value=4 Score=28.12 Aligned_cols=41 Identities=27% Similarity=0.502 Sum_probs=23.8
Q ss_pred ceeeCCCCCCCcc-Hhh-hhhcc-cccCCCCCccccCCccccCcc
Q 027247 47 YEYPCPFCSEDFD-LVG-LCCHI-DEEHPVEAKSGVCPVCVTRVT 88 (226)
Q Consensus 47 ~~f~CPfC~e~~d-v~~-L~~H~-~~eH~~e~~~vvCPVC~~~v~ 88 (226)
..+.||.|.+.+. ... -|-|. -=..+. .+...||+|...+.
T Consensus 24 ~~~~C~IC~~~~~~~~~~pCgH~~~C~~C~-~~~~~CP~Cr~~i~ 67 (75)
T 2ecg_A 24 EEKLCKICMDRNIAIVFVPCGHLVTCKQCA-EAVDKCPMCYTVIT 67 (75)
T ss_dssp HHHSCSSSCSSCCCBCCSSSCCCCBCHHHH-HHCSBCTTTCCBCC
T ss_pred CCCCCCcCCCCCCCEEEecCCCHHHHHHHh-hCCCCCccCCceec
Confidence 6789999999443 332 24443 111122 13368999987664
No 324
>3vhs_A ATPase wrnip1; zinc finger, ubiquitin-binding domain, ubiquitin binding, ME binding protein; 1.90A {Homo sapiens}
Probab=32.48 E-value=19 Score=21.37 Aligned_cols=19 Identities=26% Similarity=0.602 Sum_probs=10.7
Q ss_pred cccCCccccC-cchhhHhhh
Q 027247 77 SGVCPVCVTR-VTMDMVDHI 95 (226)
Q Consensus 77 ~vvCPVC~~~-v~~d~i~Hl 95 (226)
.|-||||-.+ +...+-.|+
T Consensus 6 ~vqcpvcqq~mpaahin~hl 25 (29)
T 3vhs_A 6 QVQCPVCQQMMPAAHINSHL 25 (29)
T ss_dssp EEECTTTCCEEEGGGHHHHH
T ss_pred eeeChHHHHhCcHHHHHHHH
Confidence 3678998653 434444443
No 325
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=32.38 E-value=24 Score=18.65 Aligned_cols=21 Identities=29% Similarity=0.526 Sum_probs=14.5
Q ss_pred eeeCC--CCCCCc-cHhhhhhccc
Q 027247 48 EYPCP--FCSEDF-DLVGLCCHID 68 (226)
Q Consensus 48 ~f~CP--fC~e~~-dv~~L~~H~~ 68 (226)
.|.|+ .|+..| ....|..|..
T Consensus 3 ~~~C~~~~C~k~f~~~~~L~~H~~ 26 (32)
T 1zfd_A 3 PYSCDHPGCDKAFVRNHDLIRHKK 26 (32)
T ss_dssp SBCCCCTTCCCCBSSSHHHHHHHG
T ss_pred CCcCcCCCCCCccCCHHHHHHHHH
Confidence 48888 788855 4566777753
No 326
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=32.27 E-value=14 Score=26.00 Aligned_cols=28 Identities=14% Similarity=0.256 Sum_probs=19.4
Q ss_pred ceeeCCCCCCCccHhhhhhcccccCCCCCccccCCcccc
Q 027247 47 YEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVT 85 (226)
Q Consensus 47 ~~f~CPfC~e~~dv~~L~~H~~~eH~~e~~~vvCPVC~~ 85 (226)
....||.|.-.+.... +....+||-|..
T Consensus 7 ~iL~CP~ck~~L~~~~-----------~~~~LiC~~cg~ 34 (68)
T 2hf1_A 7 EILVCPLCKGPLVFDK-----------SKDELICKGDRL 34 (68)
T ss_dssp EECBCTTTCCBCEEET-----------TTTEEEETTTTE
T ss_pred hheECCCCCCcCeEeC-----------CCCEEEcCCCCc
Confidence 6889999998555322 235578999854
No 327
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=32.02 E-value=13 Score=22.40 Aligned_cols=21 Identities=24% Similarity=0.380 Sum_probs=16.4
Q ss_pred ceeeCCCCCCCcc-Hhhhhhcc
Q 027247 47 YEYPCPFCSEDFD-LVGLCCHI 67 (226)
Q Consensus 47 ~~f~CPfC~e~~d-v~~L~~H~ 67 (226)
--|.|+.|++.|. ...|..|.
T Consensus 7 kp~~C~~CgK~F~~~s~L~~H~ 28 (36)
T 1fv5_A 7 ARFMCLPCGIAFSSPSTLEAHQ 28 (36)
T ss_dssp CCCEETTTTEECSCHHHHHHHH
T ss_pred cCeECCCCCCccCCHhHccCcC
Confidence 3599999999554 56788886
No 328
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=31.55 E-value=15 Score=25.93 Aligned_cols=28 Identities=7% Similarity=0.054 Sum_probs=19.3
Q ss_pred ceeeCCCCCCCccHhhhhhcccccCCCCCccccCCcccc
Q 027247 47 YEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVT 85 (226)
Q Consensus 47 ~~f~CPfC~e~~dv~~L~~H~~~eH~~e~~~vvCPVC~~ 85 (226)
....||.|.-.+.... +....+||-|..
T Consensus 7 ~iL~CP~ck~~L~~~~-----------~~~~LiC~~cg~ 34 (68)
T 2jr6_A 7 DILVCPVTKGRLEYHQ-----------DKQELWSRQAKL 34 (68)
T ss_dssp CCCBCSSSCCBCEEET-----------TTTEEEETTTTE
T ss_pred hheECCCCCCcCeEeC-----------CCCEEEcCCCCc
Confidence 6789999997555432 235578998854
No 329
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=31.37 E-value=20 Score=25.92 Aligned_cols=25 Identities=24% Similarity=0.559 Sum_probs=19.7
Q ss_pred eeeCCCCCCCc-cHhhhhhcccccCC
Q 027247 48 EYPCPFCSEDF-DLVGLCCHIDEEHP 72 (226)
Q Consensus 48 ~f~CPfC~e~~-dv~~L~~H~~~eH~ 72 (226)
.|.|++|+..| ....|..|+...|.
T Consensus 100 ~~~C~~C~k~f~~~~~l~~H~~~h~~ 125 (129)
T 2wbt_A 100 TKVCPVCKKEFTSTDSALDHVCKKHN 125 (129)
T ss_dssp CCBCTTTCCBCSSHHHHHHHHHHTTC
T ss_pred CCCCCCCCcccCCHHHHHHHHHHHCC
Confidence 49999999966 56778899876653
No 330
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=31.11 E-value=2.9 Score=27.98 Aligned_cols=42 Identities=21% Similarity=0.437 Sum_probs=24.3
Q ss_pred ceeeCCCCCCCccH-hhhhhcccccCCC---CCccccCCccccCcc
Q 027247 47 YEYPCPFCSEDFDL-VGLCCHIDEEHPV---EAKSGVCPVCVTRVT 88 (226)
Q Consensus 47 ~~f~CPfC~e~~dv-~~L~~H~~~eH~~---e~~~vvCPVC~~~v~ 88 (226)
..+.||.|.+.+.. .--|.|.-=..+. -.+...||+|...+.
T Consensus 14 ~~~~C~IC~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~ 59 (70)
T 2ecn_A 14 DEEECCICMDGRADLILPCAHSFCQKCIDKWSDRHRNCPICRLQMT 59 (70)
T ss_dssp CCCCCSSSCCSCCSEEETTTEEECHHHHHHSSCCCSSCHHHHHCTT
T ss_pred CCCCCeeCCcCccCcccCCCCcccHHHHHHHHHCcCcCCCcCCccc
Confidence 56899999995443 2235554211111 124678999976553
No 331
>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.01 E-value=20 Score=21.66 Aligned_cols=21 Identities=29% Similarity=0.498 Sum_probs=15.9
Q ss_pred eeeCCC--CCCC-ccHhhhhhccc
Q 027247 48 EYPCPF--CSED-FDLVGLCCHID 68 (226)
Q Consensus 48 ~f~CPf--C~e~-~dv~~L~~H~~ 68 (226)
-|.|++ |+.. .....|..|+.
T Consensus 9 p~~C~~~~C~k~F~~~~~L~~H~r 32 (38)
T 2eln_A 9 LLKCPTDGCDYSTPDKYKLQAHLK 32 (38)
T ss_dssp CEECSSSSCCCEESCHHHHHHHHH
T ss_pred CCCCCCCCCCCccCCHHHHHHHHH
Confidence 499987 9994 46677888863
No 332
>2fiy_A Protein FDHE homolog; FDHE protein, structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pseudomonas aeruginosa} SCOP: e.59.1.1
Probab=30.24 E-value=11 Score=33.70 Aligned_cols=10 Identities=30% Similarity=0.773 Sum_probs=7.5
Q ss_pred ceeeCCCCCC
Q 027247 47 YEYPCPFCSE 56 (226)
Q Consensus 47 ~~f~CPfC~e 56 (226)
..=.||.||.
T Consensus 181 ~~~~CPvCGs 190 (309)
T 2fiy_A 181 SRTLCPACGS 190 (309)
T ss_dssp TCSSCTTTCC
T ss_pred cCCCCCCCCC
Confidence 4567888887
No 333
>2lo3_A SAGA-associated factor 73; zinc-finger, deubiquitination, transcription factor, SAGA CO transcription; NMR {Saccharomyces cerevisiae}
Probab=30.12 E-value=14 Score=24.23 Aligned_cols=26 Identities=23% Similarity=0.451 Sum_probs=22.0
Q ss_pred eeeCCCCCCCccHhhhhhcccccCCCC
Q 027247 48 EYPCPFCSEDFDLVGLCCHIDEEHPVE 74 (226)
Q Consensus 48 ~f~CPfC~e~~dv~~L~~H~~~eH~~e 74 (226)
.=-|--||..+-+..+..|+ ++|+..
T Consensus 17 YRvC~~CgkPi~lsAIvdHL-enhC~~ 42 (44)
T 2lo3_A 17 YRVCEKCGKPLALTAIVDHL-ENHCAG 42 (44)
T ss_dssp EEECTTTCCEEETTTHHHHH-HHCCTT
T ss_pred chhhcccCCcchHHHHHHHH-HHHhcc
Confidence 45799999999999999998 667653
No 334
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=29.91 E-value=17 Score=25.70 Aligned_cols=28 Identities=14% Similarity=0.292 Sum_probs=19.5
Q ss_pred ceeeCCCCCCCccHhhhhhcccccCCCCCccccCCcccc
Q 027247 47 YEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVT 85 (226)
Q Consensus 47 ~~f~CPfC~e~~dv~~L~~H~~~eH~~e~~~vvCPVC~~ 85 (226)
....||.|.-.+.... +....+||-|..
T Consensus 7 eiL~CP~ck~~L~~~~-----------~~~~LiC~~cg~ 34 (69)
T 2pk7_A 7 DILACPICKGPLKLSA-----------DKTELISKGAGL 34 (69)
T ss_dssp GTCCCTTTCCCCEECT-----------TSSEEEETTTTE
T ss_pred hheeCCCCCCcCeEeC-----------CCCEEEcCCCCc
Confidence 6789999998655321 235678999854
No 335
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}
Probab=29.82 E-value=23 Score=19.86 Aligned_cols=22 Identities=18% Similarity=0.442 Sum_probs=15.8
Q ss_pred ceeeCCC--CCCCc-cHhhhhhccc
Q 027247 47 YEYPCPF--CSEDF-DLVGLCCHID 68 (226)
Q Consensus 47 ~~f~CPf--C~e~~-dv~~L~~H~~ 68 (226)
-.|.|++ |+..| ....|..|..
T Consensus 7 k~~~C~~~~C~k~f~~~~~L~~H~~ 31 (37)
T 1va1_A 7 KQHICHIQGCGKVYGKTSHLRAHLR 31 (37)
T ss_dssp CCEECCSTTCCCEESCHHHHHHHHH
T ss_pred CCCCCCCCCCCCccCCHHHHHHHHH
Confidence 3599996 99965 4566777753
No 336
>2js4_A UPF0434 protein BB2007; NESG, northeast structural genomics consortium, beta, PSI-2, protein structure initiative; NMR {Bordetella bronchiseptica RB50}
Probab=29.40 E-value=16 Score=25.87 Aligned_cols=28 Identities=18% Similarity=0.351 Sum_probs=19.4
Q ss_pred ceeeCCCCCCCccHhhhhhcccccCCCCCccccCCcccc
Q 027247 47 YEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVT 85 (226)
Q Consensus 47 ~~f~CPfC~e~~dv~~L~~H~~~eH~~e~~~vvCPVC~~ 85 (226)
....||.|.-.+.... +....+||-|..
T Consensus 7 ~iL~CP~ck~~L~~~~-----------~~~~LiC~~cg~ 34 (70)
T 2js4_A 7 DILVCPVCKGRLEFQR-----------AQAELVCNADRL 34 (70)
T ss_dssp CCCBCTTTCCBEEEET-----------TTTEEEETTTTE
T ss_pred hheECCCCCCcCEEeC-----------CCCEEEcCCCCc
Confidence 6789999998655421 235578999854
No 337
>2r6f_A Excinuclease ABC subunit A; UVRA, nucleotide excision repair, DNA repair, ABC ATPase, at cassette, DNA damage, DNA excision; HET: ADP; 3.20A {Geobacillus stearothermophilus} PDB: 3uwx_A
Probab=29.24 E-value=20 Score=37.02 Aligned_cols=34 Identities=21% Similarity=0.523 Sum_probs=22.3
Q ss_pred ceeeCCCCCCCccHhhhhhcccccCCCCCccccCCcccc
Q 027247 47 YEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVT 85 (226)
Q Consensus 47 ~~f~CPfC~e~~dv~~L~~H~~~eH~~e~~~vvCPVC~~ 85 (226)
..|.||.||..|...+= ..=.|.+-.+.||.|.-
T Consensus 266 ~~~~cp~~g~~~~~~~p-----~~FSfN~p~GaCp~C~G 299 (972)
T 2r6f_A 266 EKHACPYCGFSIGELEP-----RLFSFNSPFGACPDCDG 299 (972)
T ss_dssp SSEECTTTCCEEECCCG-----GGGCSSSTTTBCTTTTS
T ss_pred ccccCCCCCCcCCCCCh-----hhcCcCCCCCCCCCCcC
Confidence 56999999986543221 11134556699999975
No 338
>2k0a_A PRE-mRNA-splicing factor RDS3; zinc finger, topological knot, mRNA processing, nucleus, spliceosome, RNA binding protein; NMR {Saccharomyces cerevisiae}
Probab=29.08 E-value=12 Score=28.95 Aligned_cols=39 Identities=18% Similarity=0.364 Sum_probs=28.2
Q ss_pred eeCCCCCCCccHhhhhhcccccCCCCCccccCCccccCcc
Q 027247 49 YPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVT 88 (226)
Q Consensus 49 f~CPfC~e~~dv~~L~~H~~~eH~~e~~~vvCPVC~~~v~ 88 (226)
=+||.|+..+--..++ |+-++=.+.+....|-||...+|
T Consensus 30 GkC~iCDs~Vrp~~~V-rICdeCs~G~~~~rCIiCg~~~g 68 (109)
T 2k0a_A 30 GKCPICDSYVRPKRKV-RVCENCSFGKQAKNCIICNLNVG 68 (109)
T ss_dssp TCCTTTCCCCCCCEEC-EEEHHHHTSSTTSBCTTTSSSBC
T ss_pred CcccccCCccCCcceE-EECCcCCCCCcCCceEEcCCCCC
Confidence 4699998866665554 45566677777888999986666
No 339
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=29.07 E-value=30 Score=26.59 Aligned_cols=27 Identities=22% Similarity=0.401 Sum_probs=19.9
Q ss_pred ceeeCCCCCCCccHhhhhhcccccCCCCCccccCCcccc
Q 027247 47 YEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVT 85 (226)
Q Consensus 47 ~~f~CPfC~e~~dv~~L~~H~~~eH~~e~~~vvCPVC~~ 85 (226)
..|.|--||..| + .--.+.+.||.|..
T Consensus 66 ~p~~C~~CG~~F-----~-------~~~~kPsrCP~CkS 92 (105)
T 2gmg_A 66 KPAQCRKCGFVF-----K-------AEINIPSRCPKCKS 92 (105)
T ss_dssp CCCBBTTTCCBC-----C-------CCSSCCSSCSSSCC
T ss_pred ECcChhhCcCee-----c-------ccCCCCCCCcCCCC
Confidence 468999999998 1 11246689999965
No 340
>1e7l_A GP49, recombination endonuclease VII; resolvase, holliday junction, DNAse; HET: SO4; 1.32A {Bacteriophage T4} SCOP: a.140.4.1 d.4.1.5 PDB: 2qnc_A* 1en7_A 1e7d_A 2qnf_A*
Probab=28.94 E-value=8.5 Score=31.64 Aligned_cols=42 Identities=17% Similarity=0.432 Sum_probs=27.3
Q ss_pred ceeeCCCCCCCccHhhhhhcccccC-----CC-CCccccCCccccCcc
Q 027247 47 YEYPCPFCSEDFDLVGLCCHIDEEH-----PV-EAKSGVCPVCVTRVT 88 (226)
Q Consensus 47 ~~f~CPfC~e~~dv~~L~~H~~~eH-----~~-e~~~vvCPVC~~~v~ 88 (226)
+.-.||.|+..++...=-.|++=.| .. ..+-+.|.-|...+|
T Consensus 19 Q~g~C~IC~~~l~~~~~~~~vDHdH~~~g~~tG~VRGlLC~~CN~~lG 66 (157)
T 1e7l_A 19 QNGKCLICQRELNPDVQANHLDHDHELNGPKAGKVRGLLCNLCDAAEG 66 (157)
T ss_dssp TTTBCTTTCCBCCSSGGGSEEEECCCCSSTTTTBEEEEECHHHHHHHH
T ss_pred hCCcCcccCCccccccccccccCCCCCCCCCCCcchhhccHhHhchhc
Confidence 5678999999776433244666667 22 223467999976655
No 341
>2jz8_A Uncharacterized protein BH09830; zinc binding, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Bartonella henselae str}
Probab=28.92 E-value=16 Score=27.34 Aligned_cols=15 Identities=33% Similarity=0.733 Sum_probs=10.9
Q ss_pred eeeCCCCCCCccHhh
Q 027247 48 EYPCPFCSEDFDLVG 62 (226)
Q Consensus 48 ~f~CPfC~e~~dv~~ 62 (226)
.-.||||+.-|-...
T Consensus 48 ~~~CpYCg~~y~~~~ 62 (87)
T 2jz8_A 48 EKICPYCSTLYRYDP 62 (87)
T ss_dssp EECCTTTCCEEECCT
T ss_pred eEECCCCCCEeEcCC
Confidence 578999998665443
No 342
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=28.89 E-value=3 Score=27.66 Aligned_cols=42 Identities=29% Similarity=0.558 Sum_probs=23.9
Q ss_pred eeeCCCCCC-CccHh------hhhhcccccCCC----CCccccCCccccCcch
Q 027247 48 EYPCPFCSE-DFDLV------GLCCHIDEEHPV----EAKSGVCPVCVTRVTM 89 (226)
Q Consensus 48 ~f~CPfC~e-~~dv~------~L~~H~~~eH~~----e~~~vvCPVC~~~v~~ 89 (226)
.+.||.|.+ .+.-. .-|-|.-=..+. ......||+|...+..
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 55 (65)
T 1g25_A 3 DQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLRK 55 (65)
T ss_dssp TTCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHHTTSSSCTTTCCCCSS
T ss_pred CCcCCcCCCCccCCCccCeecCCCCCHhHHHHHHHHHHcCCCcCCCCCCcccc
Confidence 478999988 44333 235553211111 1235679999887754
No 343
>3al0_B Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase; protein-RNA complex, ligase-RNA complex; HET: GSU; 3.37A {Thermotoga maritima}
Probab=27.92 E-value=22 Score=33.89 Aligned_cols=17 Identities=24% Similarity=0.755 Sum_probs=14.0
Q ss_pred CCCCccccCCccccCcc
Q 027247 72 PVEAKSGVCPVCVTRVT 88 (226)
Q Consensus 72 ~~e~~~vvCPVC~~~v~ 88 (226)
-.+++.-|||||...||
T Consensus 31 g~~pNt~vcpv~lg~PG 47 (482)
T 3al0_B 31 ELPPNTAICPVCTGQPG 47 (482)
T ss_dssp TCCTTSSCCTTTTTCTT
T ss_pred cCCCcCccCceecCCCC
Confidence 34577789999999987
No 344
>2jny_A Uncharacterized BCR; structure, CGR1, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: b.171.1.1
Probab=27.86 E-value=26 Score=24.65 Aligned_cols=30 Identities=10% Similarity=-0.013 Sum_probs=20.3
Q ss_pred ccCcceeeCCCCCCCccHhhhhhcccccCCCCCccccCCcccc
Q 027247 43 VKGEYEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVT 85 (226)
Q Consensus 43 ~~~~~~f~CPfC~e~~dv~~L~~H~~~eH~~e~~~vvCPVC~~ 85 (226)
+. ....||.|.-.+.... +....+||-|..
T Consensus 7 LL--eiL~CP~ck~~L~~~~-----------~~g~LvC~~c~~ 36 (67)
T 2jny_A 7 LL--EVLACPKDKGPLRYLE-----------SEQLLVNERLNL 36 (67)
T ss_dssp GT--CCCBCTTTCCBCEEET-----------TTTEEEETTTTE
T ss_pred HH--HHhCCCCCCCcCeEeC-----------CCCEEEcCCCCc
Confidence 55 7889999988554321 235578998843
No 345
>3h0l_B Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; multi protein complex, ligase, protein biosynthesis; HET: ADP; 2.30A {Aquifex aeolicus} PDB: 3h0m_B 3h0r_B*
Probab=26.47 E-value=24 Score=33.57 Aligned_cols=18 Identities=33% Similarity=0.713 Sum_probs=14.8
Q ss_pred CCCCCccccCCccccCcc
Q 027247 71 HPVEAKSGVCPVCVTRVT 88 (226)
Q Consensus 71 H~~e~~~vvCPVC~~~v~ 88 (226)
.-.+++.-|||||...||
T Consensus 31 fg~~PNt~v~pv~lg~PG 48 (478)
T 3h0l_B 31 FGAEPNTNVCPVCLGMPG 48 (478)
T ss_dssp TTCCTTCSCCTTTTTCTT
T ss_pred cCCCCccccCccccCCCC
Confidence 344677899999999988
No 346
>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=26.30 E-value=27 Score=25.21 Aligned_cols=28 Identities=25% Similarity=0.481 Sum_probs=20.2
Q ss_pred eeeCCC--CCCCcc-HhhhhhcccccCCCCC
Q 027247 48 EYPCPF--CSEDFD-LVGLCCHIDEEHPVEA 75 (226)
Q Consensus 48 ~f~CPf--C~e~~d-v~~L~~H~~~eH~~e~ 75 (226)
-|.|++ |+.-|. ...|..|+...|..+.
T Consensus 27 PYkC~~~~CgKaFsr~s~L~~H~rriHTgEK 57 (73)
T 1x3c_A 27 PYRCVHQGCFAAFTIQQNLILHYQAVHKSDL 57 (73)
T ss_dssp SCBCCSTTCCCBCSSHHHHHHHHHHHSSSCC
T ss_pred CeECCCCCcChhHcCHHHHHHHhhhhCCCCC
Confidence 399976 999654 5668888766677543
No 347
>2jvm_A Uncharacterized protein; alpha+beta, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Rhodobacter sphaeroides 2}
Probab=26.15 E-value=21 Score=26.22 Aligned_cols=16 Identities=13% Similarity=0.324 Sum_probs=11.3
Q ss_pred ceeeCCCCCCCccHhh
Q 027247 47 YEYPCPFCSEDFDLVG 62 (226)
Q Consensus 47 ~~f~CPfC~e~~dv~~ 62 (226)
....|||||.-|-...
T Consensus 52 g~~~CpYCg~~f~l~~ 67 (80)
T 2jvm_A 52 GFVECGYCDRRYIHES 67 (80)
T ss_dssp CEEECSSSSCEEEEHH
T ss_pred CeEECCCCCCEEEecC
Confidence 3578999999554443
No 348
>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=25.69 E-value=30 Score=19.14 Aligned_cols=21 Identities=24% Similarity=0.569 Sum_probs=14.9
Q ss_pred eeeCCC--CCCCc-cHhhhhhccc
Q 027247 48 EYPCPF--CSEDF-DLVGLCCHID 68 (226)
Q Consensus 48 ~f~CPf--C~e~~-dv~~L~~H~~ 68 (226)
.|.|++ |+..| ....|..|+.
T Consensus 6 ~~~C~~~~C~k~f~~~~~L~~H~~ 29 (38)
T 1bhi_A 6 PFLCTAPGCGQRFTNEDHLAVHKH 29 (38)
T ss_dssp CEECCCTTTCCEESSHHHHHHHHH
T ss_pred ceECCCCCCCcccCCHHHHHHHHH
Confidence 599995 99954 4566777763
No 349
>3ip4_B Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase; multi protein complex, ligase, ATP-binding, nucleotide-bindi protein biosynthesis; 1.90A {Staphylococcus aureus subsp} PDB: 2df4_B 2dqn_B* 2g5h_B 2g5i_B* 2f2a_B
Probab=24.84 E-value=27 Score=33.28 Aligned_cols=17 Identities=12% Similarity=-0.001 Sum_probs=14.4
Q ss_pred CCCCccccCCccccCcc
Q 027247 72 PVEAKSGVCPVCVTRVT 88 (226)
Q Consensus 72 ~~e~~~vvCPVC~~~v~ 88 (226)
-.+++.-|||||...||
T Consensus 30 g~~PNt~v~pv~lg~PG 46 (483)
T 3ip4_B 30 GAEPNSNTNVIDLAYPG 46 (483)
T ss_dssp CSSTTCSCCTTTTTCTT
T ss_pred CCCCccCcCchhccCCC
Confidence 45677889999999988
No 350
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A
Probab=24.66 E-value=24 Score=17.84 Aligned_cols=20 Identities=35% Similarity=0.615 Sum_probs=13.6
Q ss_pred eeCC--CCCCCc-cHhhhhhccc
Q 027247 49 YPCP--FCSEDF-DLVGLCCHID 68 (226)
Q Consensus 49 f~CP--fC~e~~-dv~~L~~H~~ 68 (226)
|.|+ .|+..| ....|..|..
T Consensus 3 ~~C~~~~C~k~f~~~~~l~~H~~ 25 (29)
T 2ab3_A 3 YVCHFENCGRSFNDRRKLNRHKK 25 (29)
T ss_dssp EEECSTTTCEEESSHHHHHHHHG
T ss_pred CCCcCCcCcCccCCHHHHHHHHH
Confidence 7788 888854 4566777753
No 351
>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}
Probab=24.61 E-value=39 Score=25.11 Aligned_cols=31 Identities=26% Similarity=0.411 Sum_probs=22.8
Q ss_pred CCCccccCCccccCcchhhHhhhhhccccccc
Q 027247 73 VEAKSGVCPVCVTRVTMDMVDHITTQHGNISN 104 (226)
Q Consensus 73 ~e~~~vvCPVC~~~v~~d~i~Hl~~qH~~~~K 104 (226)
.....+||.+|...- .-+-+||+..||--..
T Consensus 17 i~~d~iiClecGK~f-K~LkRHL~~~hgltpe 47 (87)
T 2jsp_A 17 VQDDHIVCLECGGSF-KSLKRHLTTHHSMTPE 47 (87)
T ss_dssp BCSSCEECTBTCCEE-SBHHHHHHHTTCSCHH
T ss_pred cCCCceEecccchhh-HHHHHHHHHccCCCHH
Confidence 345568999998754 3577999998987653
No 352
>2a25_A Ubiquitin ligase SIAH1; protein-peptide complex, ligase; 2.20A {Homo sapiens} PDB: 2an6_A 1k2f_A
Probab=24.53 E-value=24 Score=29.01 Aligned_cols=50 Identities=22% Similarity=0.457 Sum_probs=15.6
Q ss_pred eeeCCC----CCCCccHhhhhhcccccCCCCCccccCCc----cccCcc--hhhHhhhhhcccc
Q 027247 48 EYPCPF----CSEDFDLVGLCCHIDEEHPVEAKSGVCPV----CVTRVT--MDMVDHITTQHGN 101 (226)
Q Consensus 48 ~f~CPf----C~e~~dv~~L~~H~~~eH~~e~~~vvCPV----C~~~v~--~d~i~Hl~~qH~~ 101 (226)
.|+||| |.+-+.-.....|-. .= .-+.-.||+ |.- .| .++..|+...|+.
T Consensus 6 ~~pC~~~~~GC~~~~~y~~~~~He~-~C--~f~p~~Cp~~g~~C~~-~G~~~~l~~H~~~~H~~ 65 (193)
T 2a25_A 6 LFPCKYASSGCEITLPHTEKADHEE-LC--EFRPYSCPCPGASCKW-QGSLDAVMPHLMHQHKS 65 (193)
T ss_dssp ---------------------------------CEECCCC--CCCC-EECSTTHHHHHHHHCTT
T ss_pred EecCCCCCCCCCcccccccccchhh-cC--CCCCccCCCCCCCCcC-CCCHHHHHHHHHHHCCC
Confidence 478887 777666666666631 11 123446776 743 23 4788888888875
No 353
>2jrr_A Uncharacterized protein; solution structure, SIR90, structural genomics, PSI-2, protein structure initiative; NMR {Silicibacter pomeroyi}
Probab=24.47 E-value=22 Score=25.28 Aligned_cols=13 Identities=23% Similarity=0.667 Sum_probs=9.7
Q ss_pred ceeeCCCCCCCcc
Q 027247 47 YEYPCPFCSEDFD 59 (226)
Q Consensus 47 ~~f~CPfC~e~~d 59 (226)
....||||+.-|-
T Consensus 39 g~~~CpYCg~~f~ 51 (67)
T 2jrr_A 39 GWVECPYCDCKYV 51 (67)
T ss_dssp SEEEETTTTEEEE
T ss_pred CeEECCCCCCEEE
Confidence 3578999998543
No 354
>3bhp_A UPF0291 protein YNZC; NESG, SR384, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.01A {Bacillus subtilis}
Probab=23.81 E-value=59 Score=22.59 Aligned_cols=21 Identities=19% Similarity=0.569 Sum_probs=15.3
Q ss_pred CCCCHHHHHHHHh-HhhHHHHH
Q 027247 196 SSLSNEDHLEKAN-RSNFAQGL 216 (226)
Q Consensus 196 ~~ls~ed~eEk~~-R~eFVQ~L 216 (226)
..|+++|++|+.+ |-++++.+
T Consensus 20 ~gLT~eEk~EQ~~LR~eYl~~f 41 (60)
T 3bhp_A 20 GVITEEEKAEQQKLRQEYLKGF 41 (60)
T ss_dssp TCCCHHHHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHHHH
Confidence 5699999999855 66665543
No 355
>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.78 E-value=19 Score=25.91 Aligned_cols=16 Identities=13% Similarity=0.235 Sum_probs=12.9
Q ss_pred hhhHhhhhhccccccc
Q 027247 89 MDMVDHITTQHGNISN 104 (226)
Q Consensus 89 ~d~i~Hl~~qH~~~~K 104 (226)
.+|.+||..-|..-++
T Consensus 49 S~L~rHL~~~H~~e~~ 64 (76)
T 2djr_A 49 TALWKHLKSMHREELE 64 (76)
T ss_dssp CHHHHHHHHTTHHHHH
T ss_pred HHHHHHHHHHCHHHHH
Confidence 4889999888887765
No 356
>2ygr_A Uvrabc system protein A; hydrolase, nucleotide excision repair; 3.40A {Mycobacterium tuberculosis} PDB: 3zqj_A
Probab=23.57 E-value=33 Score=35.44 Aligned_cols=34 Identities=21% Similarity=0.411 Sum_probs=21.8
Q ss_pred ceeeCCCCC-CCccHhhhhhcccccCCCCCccccCCcccc
Q 027247 47 YEYPCPFCS-EDFDLVGLCCHIDEEHPVEAKSGVCPVCVT 85 (226)
Q Consensus 47 ~~f~CPfC~-e~~dv~~L~~H~~~eH~~e~~~vvCPVC~~ 85 (226)
..|.||.|| ..|...+= ..=.|.+-.+.||.|.-
T Consensus 274 ~~~~c~~~g~~~~~~~~p-----~~FSfN~p~GaCp~C~G 308 (993)
T 2ygr_A 274 EKLACPNGHALAVDDLEP-----RSFSFNSPYGACPDCSG 308 (993)
T ss_dssp SSCBCTTCCCCSCSCCCG-----GGGCTTSTTTBCTTTTT
T ss_pred ccccCCCCCCcccCCCCh-----hhcCcCCCCCCCCCCcC
Confidence 468999999 55543211 11144566699999974
No 357
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=23.15 E-value=18 Score=29.50 Aligned_cols=12 Identities=25% Similarity=1.088 Sum_probs=9.9
Q ss_pred eeCCCCCCCccH
Q 027247 49 YPCPFCSEDFDL 60 (226)
Q Consensus 49 f~CPfC~e~~dv 60 (226)
|.||+|..++..
T Consensus 3 ~~Cp~C~~~~~~ 14 (269)
T 1p91_A 3 FSCPLCHQPLSR 14 (269)
T ss_dssp BBCTTTCCBCEE
T ss_pred ccCCCCCcccee
Confidence 789999887655
No 358
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=22.73 E-value=8.4 Score=29.40 Aligned_cols=18 Identities=22% Similarity=0.682 Sum_probs=11.8
Q ss_pred ceeeCCCCCC-CccHhhhh
Q 027247 47 YEYPCPFCSE-DFDLVGLC 64 (226)
Q Consensus 47 ~~f~CPfC~e-~~dv~~L~ 64 (226)
..|.||||.. .=.+..|.
T Consensus 29 ~dy~Cp~C~~~~~~~~~l~ 47 (184)
T 4dvc_A 29 FSFYCPHCNTFEPIIAQLK 47 (184)
T ss_dssp ECTTCHHHHHHHHHHHHHH
T ss_pred ECCCCHhHHHHhHHHHHHH
Confidence 4699999987 43344443
No 359
>2gag_D Heterotetrameric sarcosine oxidase delta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_D* 1x31_D* 1vrq_D* 3ad7_D* 3ad8_D* 3ad9_D* 3ada_D*
Probab=21.90 E-value=21 Score=27.23 Aligned_cols=15 Identities=20% Similarity=0.410 Sum_probs=9.7
Q ss_pred eeeCCCCCCCccHhhh
Q 027247 48 EYPCPFCSEDFDLVGL 63 (226)
Q Consensus 48 ~f~CPfC~e~~dv~~L 63 (226)
..+||+||. =|..++
T Consensus 3 ~I~CP~CG~-R~e~EF 17 (99)
T 2gag_D 3 LIDCPNCGP-RNENEF 17 (99)
T ss_dssp EEEETTTEE-EEGGGS
T ss_pred EecCCCCCC-cchhhE
Confidence 378999995 444443
No 360
>3mwm_A ZUR, putative metal uptake regulation protein; FUR, regulatory metal, graded transcription regulation, transcription; 2.40A {Streptomyces coelicolor}
Probab=21.82 E-value=26 Score=26.99 Aligned_cols=40 Identities=20% Similarity=0.346 Sum_probs=26.1
Q ss_pred ceeeCCCCCC--CccHh---hhhhcccccCCCCCc------cccCCccccC
Q 027247 47 YEYPCPFCSE--DFDLV---GLCCHIDEEHPVEAK------SGVCPVCVTR 86 (226)
Q Consensus 47 ~~f~CPfC~e--~~dv~---~L~~H~~~eH~~e~~------~vvCPVC~~~ 86 (226)
.-|-|--||. +|+.. .+...+...+.|... .++||-|..+
T Consensus 86 ~HliC~~Cg~v~~~~~~~~~~~~~~~~~~~gf~i~~~~l~~~GiC~~C~~~ 136 (139)
T 3mwm_A 86 HHLVCRACGKAVEVEGPAVEKWAEAIAAEHGYVNVAHTVEIFGTCADCAGA 136 (139)
T ss_dssp EEEEETTTCCEEEECCHHHHHHHHHHHHHTTCCSCCCCCEEEECCHHHHCC
T ss_pred cEEEECCCCCEeecccccHHHHHHHHHHhCCCEEEeeEEEEEEEChHHhCc
Confidence 5688999998 66533 344555555555433 2789999764
No 361
>3kfu_F Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase; ASPRS, gatcab, ATP-binding, aminoacyl-tRNA synthetase, ligas nucleotide-binding, protein biosynthesis, ligase-RNA comple; HET: H2U 5MU PSU; 3.00A {Thermus thermophilus}
Probab=21.74 E-value=34 Score=32.55 Aligned_cols=17 Identities=29% Similarity=0.645 Sum_probs=14.6
Q ss_pred CCCCccccCCccccCcc
Q 027247 72 PVEAKSGVCPVCVTRVT 88 (226)
Q Consensus 72 ~~e~~~vvCPVC~~~v~ 88 (226)
-.+++.-|||||...||
T Consensus 30 g~~PNt~vcpvclglPG 46 (466)
T 3kfu_F 30 GAEPNTHTCPVCLGLPG 46 (466)
T ss_dssp SCCTTSSCCTTTTTCTT
T ss_pred CCCCCCccCccccCCCC
Confidence 55778889999999988
No 362
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=21.07 E-value=21 Score=26.28 Aligned_cols=15 Identities=33% Similarity=0.764 Sum_probs=7.8
Q ss_pred eeeCCCCCCCccHhh
Q 027247 48 EYPCPFCSEDFDLVG 62 (226)
Q Consensus 48 ~f~CPfC~e~~dv~~ 62 (226)
.|.|+.|+.+|....
T Consensus 18 ~~~C~~C~~~~~~~a 32 (81)
T 2jrp_A 18 TAHCETCAKDFSLQA 32 (81)
T ss_dssp EEECTTTCCEEEEEE
T ss_pred ceECccccccCCCcc
Confidence 445666666554433
No 363
>3k7a_M Transcription initiation factor IIB; RNA polymerase II, TFIIB, DNA-binding, DNA- directed RNA polymerase, isopeptide bond, magnesium; 3.80A {Saccharomyces cerevisiae}
Probab=20.99 E-value=36 Score=30.23 Aligned_cols=38 Identities=26% Similarity=0.452 Sum_probs=25.5
Q ss_pred ceeeCCCCCCCc-cHhhhhhcccccCCCCCccccCCccccCcchhhHh
Q 027247 47 YEYPCPFCSEDF-DLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVD 93 (226)
Q Consensus 47 ~~f~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vvCPVC~~~v~~d~i~ 93 (226)
....||.|+..- + +..+ +.....||.-|..-+..+.|.
T Consensus 20 ~~~~Cp~Cg~~~~~-------iv~D--~~~G~~vC~~CG~Vl~e~~id 58 (345)
T 3k7a_M 20 IVLTCPECKVYPPK-------IVER--FSEGDVVCALCGLVLSDKLVD 58 (345)
T ss_dssp CCCCCSTTCCSCCC-------CCCC--SSSCSCCCSSSCCCCCCCCCC
T ss_pred CCCcCcCCCCCCCc-------eEEE--CCCCCEecCCCCeEccccccc
Confidence 567899998731 1 1122 356678999998877655554
No 364
>3eyy_A Putative iron uptake regulatory protein; NUR, nickel-uptake regulator, D-domain, dimerization domain, DB-domain, DNA-binding domain; 2.40A {Streptomyces coelicolor}
Probab=20.32 E-value=21 Score=27.75 Aligned_cols=40 Identities=20% Similarity=0.521 Sum_probs=21.8
Q ss_pred ceeeCCCCCC--CccHh---hhhhcccccCCCCCc------cccCCccccC
Q 027247 47 YEYPCPFCSE--DFDLV---GLCCHIDEEHPVEAK------SGVCPVCVTR 86 (226)
Q Consensus 47 ~~f~CPfC~e--~~dv~---~L~~H~~~eH~~e~~------~vvCPVC~~~ 86 (226)
.-|-|--||. +++.. .+...+...+-|... .|+||-|..+
T Consensus 89 ~HliC~~Cg~v~~~~~~~~~~~~~~~~~~~gf~i~~~~l~~~GiC~~C~~~ 139 (145)
T 3eyy_A 89 IHLVCRDCTNVIEADLSVAADFTAKLREQFGFDTDMKHFAIFGRCESCSLK 139 (145)
T ss_dssp EEEEESSSSCEEEECGGGGHHHHHHHHHHTCEEECSCSSCEEEEECC----
T ss_pred eEEEECCCCCEEEecCccHHHHHHHHHHhCCCEEEeEEEEEEEECHHHhCc
Confidence 5799999998 66543 344444433333221 3889999754
Done!