Citrus Sinensis ID: 027248

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220------
Protein Sequence
MEKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAVN
Secondary Structure (PSIPRED)
cccccccccccccEEEEcccccHHHHHHHHHHHHccccEEEccccHHHHHHHHHHHHHcccEEEEEEcccccHHHHHHHHHHHHHHcccccEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccccccccccccccHHHHHHccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccEEEEcccccHHHHHHHHHHHHcccEEEEEEcccHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHHHccccEEEEccccccccHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEccHHHcccccccHHHHHHHHHHHHHHHHHHHHcHHHcEEEEEcccccccccccccccHHHHHHHccccccccHHHHHHHcc
Coil and Loop (DISEMBL)
MEKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVChvsngqqrKNLINQTIEKFGKIDVVVSnaaanpsvdsILQTKESVLDKLWDINVKSSILLLQDaaphlqkgsSVVLISSiagyqpqssmamyGVTKTALLGLTKALAaemapdtrvncvapgfvpthFAEYITSNDGVVSSvsslklsppssltlavn
Flexible Loop (DISEMBL)
MEKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVvssrkqknvdEAVVKLKARGIEVIGvvchvsngqqrkNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVVSSVsslklsppssltlavn
Low Complexity Region (SEG)
MEKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIdvvvsnaaanpsvdsILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVtktallgltkalaaEMAPDTRVNCVAPGFVPTHFAEYITSNDGvvssvsslklsppsslTLAVN
Disordered region (IsUnstruct)
*********FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVV*******************
Disordered Region (DISOPRED)
***********GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAVN
Disordered Region (DISEMBL)
**********QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGV********************
Disordered Region (DISPRO)
********RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAVN
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAVN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	226	2.2.26 [Sep-21-2011]
Q9BTZ2	278	Dehydrogenase/reductase S	yes	no	0.884	0.719	0.497	4e-49
Q5RCF8	278	Dehydrogenase/reductase S	yes	no	0.884	0.719	0.492	9e-49
Q8SPU8	279	Dehydrogenase/reductase S	yes	no	0.898	0.727	0.480	2e-48
Q13268	258	Dehydrogenase/reductase S	no	no	0.849	0.744	0.484	3e-48
Q8WNV7	279	Dehydrogenase/reductase S	yes	no	0.853	0.691	0.469	5e-47
Q99LB2	279	Dehydrogenase/reductase S	yes	no	0.831	0.673	0.486	1e-46
Q8VID1	279	Dehydrogenase/reductase S	yes	no	0.831	0.673	0.492	3e-46
Q9GKX2	260	Dehydrogenase/reductase S	no	no	0.831	0.723	0.497	4e-46
Q6PKH6	230	Dehydrogenase/reductase S	no	no	0.809	0.795	0.489	5e-43
P0CG22	281	Putative dehydrogenase/re	no	no	0.831	0.669	0.422	4e-37

>sp|Q9BTZ2|DHRS4_HUMAN Dehydrogenase/reductase SDR family member 4 OS=Homo sapiens GN=DHRS4 PE=1 SV=3

 Score =  194 bits (493), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 102/205 (49%), Positives = 133/205 (64%), Gaps = 5/205 (2%)

Query: 1   MEKMKMAKR--FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA 58
           M    M +R     KVA+VTAST GIGF IA RL  +GA VVVSSRKQ+NVD+AV  L+ 
Sbjct: 19  MASSGMTRRDPLANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQG 78

Query: 59  RGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLW 118
            G+ V G VCHV   + R+ L+   ++  G ID++VSNAA NP   SI+   E V DK  
Sbjct: 79  EGLSVTGTVCHVGKAEDRERLVATAVKLHGGIDILVSNAAVNPFFGSIMDVTEEVWDKTL 138

Query: 119 DINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAA 176
           DINVK+  L+ +   P ++K  G SVV++SSIA + P    + Y V+KTALLGLTK LA 
Sbjct: 139 DINVKAPALMTKAVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAI 198

Query: 177 EMAP-DTRVNCVAPGFVPTHFAEYI 200
           E+AP + RVNC+APG + T F+  +
Sbjct: 199 ELAPRNIRVNCLAPGLIKTSFSRML 223

Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones.
Homo sapiens (taxid: 9606)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 1EC: 8EC: 4

>sp|Q5RCF8|DHRS4_PONAB Dehydrogenase/reductase SDR family member 4 OS=Pongo abelii GN=DHRS4 PE=2 SV=3

 Score =  193 bits (490), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 101/205 (49%), Positives = 133/205 (64%), Gaps = 5/205 (2%)

Query: 1   MEKMKMAKR--FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA 58
           M    M +R     KVA+VTAST GIGF IA RL  +GA VVVSSRKQ+NVD+AV  L+ 
Sbjct: 19  MASSGMTRRDPLANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQG 78

Query: 59  RGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLW 118
            G+ V G VCHV   + R+ L+   ++  G ID++VSNAA NP   S++   E V DK  
Sbjct: 79  EGLSVTGTVCHVGKAEDRERLVATAVKLHGGIDILVSNAAVNPFFGSLMDVTEEVWDKTL 138

Query: 119 DINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAA 176
           DINVK+  L+ +   P ++K  G SVV++SSIA + P    + Y V+KTALLGLTK LA 
Sbjct: 139 DINVKAPALMTKAVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAI 198

Query: 177 EMAP-DTRVNCVAPGFVPTHFAEYI 200
           E+AP + RVNC+APG + T F+  +
Sbjct: 199 ELAPRNIRVNCLAPGLIKTSFSRML 223

Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones.

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 4

>sp|Q8SPU8|DHRS4_BOVIN Dehydrogenase/reductase SDR family member 4 OS=Bos taurus GN=DHRS4 PE=2 SV=2

 Score =  192 bits (487), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 100/208 (48%), Positives = 135/208 (64%), Gaps = 5/208 (2%)

Query: 1   MEKMKMAKR--FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA 58
           M    MA+R     KVA+VTAST GIGF IA RL  +GA VVVSSRKQ+NVD AV  LK 
Sbjct: 20  MASCGMARRNPLDNKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDRAVATLKG 79

Query: 59  RGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLW 118
            G+ V G VCHV   + R+ L+   ++  G +D+++SNAA +P   S++   E V DK+ 
Sbjct: 80  EGLSVTGTVCHVGKAEDRERLVATAVKLHGGVDILISNAAVSPFFGSLMDVPEEVWDKIL 139

Query: 119 DINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAA 176
           D+NVK++ LL +   P + K  G S+V++SSIA Y P  S+  Y V+KTALLGLTK LA 
Sbjct: 140 DVNVKATALLTKAVVPEMAKRGGGSIVIVSSIAAYSPFPSLGPYNVSKTALLGLTKNLAL 199

Query: 177 EMAP-DTRVNCVAPGFVPTHFAEYITSN 203
           E+A  + RVNC+APG + T F+  +  +
Sbjct: 200 ELAESNVRVNCLAPGLIRTSFSRVLWED 227

Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 4

>sp|Q13268|DHRS2_HUMAN Dehydrogenase/reductase SDR family member 2 OS=Homo sapiens GN=DHRS2 PE=1 SV=3

 Score =  191 bits (485), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 94/194 (48%), Positives = 131/194 (67%), Gaps = 2/194 (1%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           +VA+VT ST GIGF IA RL  +GA VV+SSRKQ+NVD A+ KL+  G+ V G+VCHV  
Sbjct: 15  RVAVVTGSTSGIGFAIARRLARDGAHVVISSRKQQNVDRAMAKLQGEGLSVAGIVCHVGK 74

Query: 73  GQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDA 132
            + R+ L+ + +E  G +D +V +A  NP V S L T E + DK+  +NVKS  LLL   
Sbjct: 75  AEDREQLVAKALEHCGGVDFLVCSAGVNPLVGSTLGTSEQIWDKILSVNVKSPALLLSQL 134

Query: 133 APHLQ-KGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPG 190
            P+++ +  +V+L+SSIA Y P  ++ +Y V+KTALLGLT+ LA E+AP D RVNCV PG
Sbjct: 135 LPYMENRRGAVILVSSIAAYNPVVALGVYNVSKTALLGLTRTLALELAPKDIRVNCVVPG 194

Query: 191 FVPTHFAEYITSND 204
            + T F++    N+
Sbjct: 195 IIKTDFSKVFHGNE 208

Displays NADPH-dependent dicarbonyl reductase activity in vitro with 3,4-Hexanedione, 2,3-Heptanedione and 1-Phenyl-1,2-propanedione as substrates. No reductase activity is displayed in vitro with steroids, retinoids and sugars as substrates. May inhibit cell replication.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q8WNV7|DHRS4_PIG Dehydrogenase/reductase SDR family member 4 OS=Sus scrofa GN=DHRS4 PE=1 SV=2

 Score =  187 bits (475), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 92/196 (46%), Positives = 131/196 (66%), Gaps = 3/196 (1%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
           K  + KVA+VTAST GIG  IA RL  +GA VVVSSRKQ+NVD  V  L+  G+ V G V
Sbjct: 29  KPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTV 88

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
           CHV   + R+ L+   +   G +D++VSNAA NP   +I+   E V DK+  +NVK+++L
Sbjct: 89  CHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVL 148

Query: 128 LLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRV 184
           + +   P ++K  G SV+++SS+  Y P  ++  Y V+KTALLGLTK LA E+AP + RV
Sbjct: 149 MTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNIRV 208

Query: 185 NCVAPGFVPTHFAEYI 200
           NC+APG + T+F++ +
Sbjct: 209 NCLAPGLIKTNFSQVL 224

Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones.

Sus scrofa (taxid: 9823)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 4

>sp|Q99LB2|DHRS4_MOUSE Dehydrogenase/reductase SDR family member 4 OS=Mus musculus GN=Dhrs4 PE=2 SV=3

 Score =  186 bits (471), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 93/191 (48%), Positives = 130/191 (68%), Gaps = 3/191 (1%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           KVA+VTAST GIGF IA RL  +GA VVVSSRKQ+NVD AV  L+  G+ V G+VCHV  
Sbjct: 34  KVALVTASTDGIGFAIARRLAEDGAHVVVSSRKQQNVDRAVATLQGEGLSVTGIVCHVGK 93

Query: 73  GQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDA 132
            + R+ LI   +++   ID++VSNAA NP   +++   E V DK+  INV ++ ++++  
Sbjct: 94  AEDREKLITTALKRHQGIDILVSNAAVNPFFGNLMDVTEEVWDKVLSINVTATAMMIKAV 153

Query: 133 APHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAP 189
            P ++K  G SVV++ S+AG+    S+  Y V+KTALLGLTK  AAE+AP + RVNC+AP
Sbjct: 154 VPEMEKRGGGSVVIVGSVAGFTRFPSLGPYNVSKTALLGLTKNFAAELAPKNIRVNCLAP 213

Query: 190 GFVPTHFAEYI 200
           G + T F+  +
Sbjct: 214 GLIKTRFSSVL 224

Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 4

>sp|Q8VID1|DHRS4_RAT Dehydrogenase/reductase SDR family member 4 OS=Rattus norvegicus GN=Dhrs4 PE=2 SV=2

 Score =  185 bits (469), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 94/191 (49%), Positives = 131/191 (68%), Gaps = 3/191 (1%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           KVA+VTAST GIG  IA RL  +GA VV+SSRKQ+NVD AV  L+  G+ V GVVCHV  
Sbjct: 34  KVALVTASTDGIGLAIARRLAEDGAHVVISSRKQQNVDRAVATLQGEGLSVTGVVCHVGK 93

Query: 73  GQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDA 132
            + R+ L+N  ++    ID++VSNAA NP   +++   E V +K+  INV +S ++++  
Sbjct: 94  AEDREKLVNMALKLHQGIDILVSNAAVNPFFGNLMDVTEEVWNKVLSINVTASAMMIKAV 153

Query: 133 APHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAP 189
            P ++K  G SVV++SS+AG+    S+  Y V+KTALLGLTK  AAE+AP + RVNC+AP
Sbjct: 154 VPAMEKRGGGSVVIVSSVAGFVLFPSLGPYNVSKTALLGLTKNFAAELAPKNIRVNCLAP 213

Query: 190 GFVPTHFAEYI 200
           G + THF+  +
Sbjct: 214 GLIKTHFSSVL 224

Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 4

>sp|Q9GKX2|DHRS4_RABIT Dehydrogenase/reductase SDR family member 4 (Fragment) OS=Oryctolagus cuniculus GN=DHRS4 PE=1 SV=1

 Score =  184 bits (467), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 95/191 (49%), Positives = 128/191 (67%), Gaps = 3/191 (1%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           KVAIVTAST GIG  IA RL  +GA VV+SSRKQ+NVD AV  L+A G+ V G VCHV  
Sbjct: 15  KVAIVTASTDGIGLAIARRLAQDGAHVVISSRKQQNVDRAVAALQAEGLSVTGTVCHVGK 74

Query: 73  GQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDA 132
            + R+ L+   +   G ID++VSNAA NP    ++   E V DK+ DINVK+  L+ +  
Sbjct: 75  AEDRERLVATALNLHGGIDILVSNAAVNPFFGKLMDVTEEVWDKILDINVKAMALMTKAV 134

Query: 133 APHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAP 189
            P ++K  G SVV+++SIA + P S +  Y V+KTAL+GLTK LA E+A  + RVNC+AP
Sbjct: 135 VPEMEKRGGGSVVIVASIAAFNPFSGLGPYNVSKTALVGLTKNLALELAAQNIRVNCLAP 194

Query: 190 GFVPTHFAEYI 200
           G + T F++ +
Sbjct: 195 GLIKTSFSKAL 205

Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones.

Oryctolagus cuniculus (taxid: 9986)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 4

>sp|Q6PKH6|DR4L2_HUMAN Dehydrogenase/reductase SDR family member 4-like 2 OS=Homo sapiens GN=DHRS4L2 PE=2 SV=1

 Score =  174 bits (440), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 92/188 (48%), Positives = 122/188 (64%), Gaps = 5/188 (2%)

Query: 5   KMAKR--FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIE 62
           +M +R     KVA+VTAST GIGF IA RL  + A VVVSSRKQ+NVD+AV  L+  G+ 
Sbjct: 21  RMTRRDPLTNKVALVTASTDGIGFAIARRLAQDRAHVVVSSRKQQNVDQAVATLQGEGLS 80

Query: 63  VIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINV 122
           V G VCHV   + R+ L+   ++  G ID++VSNAA NP   S++   E V DK  DINV
Sbjct: 81  VTGTVCHVGKAEDRERLVAMAVKLHGGIDILVSNAAVNPFFGSLMDVTEEVWDKTLDINV 140

Query: 123 KSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP 180
           K+  L+ +   P ++K  G SVV++SSIA + P    + Y V+KTALLGL   LA E+AP
Sbjct: 141 KAPALMTKAVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLNNTLAIELAP 200

Query: 181 -DTRVNCV 187
            + RVNC+
Sbjct: 201 RNIRVNCL 208

Probable oxidoreductase.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

>sp|P0CG22|DR4L1_HUMAN Putative dehydrogenase/reductase SDR family member 4-like 2 OS=Homo sapiens GN=DHRS4L1 PE=5 SV=1

 Score =  154 bits (390), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 82/194 (42%), Positives = 123/194 (63%), Gaps = 6/194 (3%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           KVA+VTAST  IGF +A+RL  +GA VVVS RKQ+NVD+AV  L+  G+ + G VCHV  
Sbjct: 33  KVALVTASTDWIGFAVAQRLAQDGAHVVVSRRKQQNVDQAVATLQGEGLSMTGTVCHVGK 92

Query: 73  GQQRKNLINQTIEKFGKIDVV---VSNAAANPSVDSILQTKESVLDKLWDINVKSSILLL 129
            +  + L+   ++  G ID++   ++N+       ++LQT E   D+  DIN K+  L++
Sbjct: 93  MKDWERLVATAMKLHGVIDILSLSITNSKRGLFWFTLLQTAEEAWDRNLDINGKALALMI 152

Query: 130 QDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNC 186
           +   P ++K  G SV  ++S+A ++P    + Y V+KTALLGL K LA E+AP + RVNC
Sbjct: 153 KAVVPEMEKRGGGSVGFLASVAAFRPLPGFSPYNVSKTALLGLNKTLAIELAPRNIRVNC 212

Query: 187 VAPGFVPTHFAEYI 200
           +APG + T F+  +
Sbjct: 213 LAPGLIKTSFSRML 226

Putative oxidoreductase.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	226
297742907	1084	unnamed protein product [Vitis vinifera]	0.880	0.183	0.849	2e-95
359496979	271	PREDICTED: dehydrogenase/reductase SDR f	0.880	0.734	0.849	3e-95
449455366	255	PREDICTED: dehydrogenase/reductase SDR f	0.951	0.843	0.776	1e-94
388514295	252	unknown [Lotus japonicus]	0.898	0.805	0.798	1e-92
380039554	258	tropinone reductase-like 3 [Erythroxylum	0.920	0.806	0.783	2e-92
255632703	242	unknown [Glycine max]	0.898	0.838	0.798	3e-92
351724665	252	peroxisomal short-chain dehydrogenase/re	0.898	0.805	0.798	3e-92
224113857	256	predicted protein [Populus trichocarpa]	0.942	0.832	0.746	2e-91
357480421	252	Dehydrogenase/reductase SDR family membe	0.884	0.793	0.8	6e-90
297813813	254	short-chain dehydrogenase/reductase fami	0.907	0.807	0.766	1e-89

>gi|297742907|emb|CBI35708.3| unnamed protein product [Vitis vinifera]

 Score =  354 bits (908), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 169/199 (84%), Positives = 187/199 (93%)

Query: 5   KMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVI 64
           K+ KRFQGKVAIVTASTQGIGF IAERLGLEGASVV+SSRKQ NVDEAV KLKA+GIE +
Sbjct: 3   KIGKRFQGKVAIVTASTQGIGFSIAERLGLEGASVVLSSRKQNNVDEAVKKLKAQGIEAM 62

Query: 65  GVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKS 124
           GVVCHVSN Q RKNLI +T++K+G IDVVVSNAAANPSVD IL+T+ESVLDKLW+INVKS
Sbjct: 63  GVVCHVSNAQHRKNLIEKTVQKYGAIDVVVSNAAANPSVDPILETRESVLDKLWEINVKS 122

Query: 125 SILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRV 184
           SIL+LQ+AAPHL+KGSSVVLISSIAGYQPQSSM+MYGVTKTALLGLTKALAAEM PDTRV
Sbjct: 123 SILILQEAAPHLRKGSSVVLISSIAGYQPQSSMSMYGVTKTALLGLTKALAAEMGPDTRV 182

Query: 185 NCVAPGFVPTHFAEYITSN 203
           NCVAPGFVPT+FAE++T N
Sbjct: 183 NCVAPGFVPTYFAEFLTKN 201

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359496979|ref|XP_002264497.2| PREDICTED: dehydrogenase/reductase SDR family member 4 [Vitis vinifera]

 Score =  353 bits (907), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 169/199 (84%), Positives = 187/199 (93%)

Query: 5   KMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVI 64
           K+ KRFQGKVAIVTASTQGIGF IAERLGLEGASVV+SSRKQ NVDEAV KLKA+GIE +
Sbjct: 3   KIGKRFQGKVAIVTASTQGIGFSIAERLGLEGASVVLSSRKQNNVDEAVKKLKAQGIEAM 62

Query: 65  GVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKS 124
           GVVCHVSN Q RKNLI +T++K+G IDVVVSNAAANPSVD IL+T+ESVLDKLW+INVKS
Sbjct: 63  GVVCHVSNAQHRKNLIEKTVQKYGAIDVVVSNAAANPSVDPILETRESVLDKLWEINVKS 122

Query: 125 SILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRV 184
           SIL+LQ+AAPHL+KGSSVVLISSIAGYQPQSSM+MYGVTKTALLGLTKALAAEM PDTRV
Sbjct: 123 SILILQEAAPHLRKGSSVVLISSIAGYQPQSSMSMYGVTKTALLGLTKALAAEMGPDTRV 182

Query: 185 NCVAPGFVPTHFAEYITSN 203
           NCVAPGFVPT+FAE++T N
Sbjct: 183 NCVAPGFVPTYFAEFLTKN 201

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449455366|ref|XP_004145424.1| PREDICTED: dehydrogenase/reductase SDR family member 4-like [Cucumis sativus] gi|449531127|ref|XP_004172539.1| PREDICTED: dehydrogenase/reductase SDR family member 4-like [Cucumis sativus]

 Score =  351 bits (901), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 167/215 (77%), Positives = 190/215 (88%)

Query: 1   MEKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG 60
           M   K+ KRF+GKVAIVTASTQGIGF IA RL  EGASVV+SSR+Q+NVDEAV KLKA+G
Sbjct: 1   MGNGKIGKRFEGKVAIVTASTQGIGFEIARRLAFEGASVVISSRRQRNVDEAVEKLKAQG 60

Query: 61  IEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDI 120
           +EV+G+VCHVSN QQRKNL+ +TI+K+GKIDVVVSNAA NPSVDSIL+TKESVLDKLWDI
Sbjct: 61  LEVLGIVCHVSNAQQRKNLVEKTIQKYGKIDVVVSNAAVNPSVDSILKTKESVLDKLWDI 120

Query: 121 NVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP 180
           NVK+S+LLLQD APHLQKGSSVVLISSI GY P S +AMYGVTKTALLGLTKALAAEMAP
Sbjct: 121 NVKASVLLLQDVAPHLQKGSSVVLISSIEGYNPSSLLAMYGVTKTALLGLTKALAAEMAP 180

Query: 181 DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKL 215
           DTRVNCVAPGFVPTHFA+++ +N+ +   V S  L
Sbjct: 181 DTRVNCVAPGFVPTHFADFLVTNEAIRKGVESKTL 215

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388514295|gb|AFK45209.1| unknown [Lotus japonicus]

 Score =  345 bits (884), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 162/203 (79%), Positives = 189/203 (93%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV 63
           M++ KRF+GKVAIVTASTQG GF IAERLGLEGASVV+SSRKQ+NVD A  KL+A+GI+V
Sbjct: 1   MEIPKRFRGKVAIVTASTQGTGFSIAERLGLEGASVVISSRKQQNVDAAAEKLRAKGIDV 60

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVK 123
           + VVCHVSN QQRKNLI++T++K+GKIDVVVSNAAANPSVD+ILQTK++VLDKLW+INVK
Sbjct: 61  LAVVCHVSNAQQRKNLIDKTVQKYGKIDVVVSNAAANPSVDAILQTKDTVLDKLWEINVK 120

Query: 124 SSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTR 183
           +SILLL+DAAPH+QKGSSVV+ISSIAGY P  +MAMYGVTKTALLGLTKALA EMAP+TR
Sbjct: 121 ASILLLKDAAPHMQKGSSVVIISSIAGYNPPPAMAMYGVTKTALLGLTKALAGEMAPNTR 180

Query: 184 VNCVAPGFVPTHFAEYITSNDGV 206
           VNCVAPGFVPT+FA +ITSND +
Sbjct: 181 VNCVAPGFVPTNFASFITSNDAM 203

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|380039554|gb|AFD32321.1| tropinone reductase-like 3 [Erythroxylum coca]

 Score =  344 bits (882), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 163/208 (78%), Positives = 191/208 (91%)

Query: 3   KMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIE 62
           K  + +RF+GKVAIVTASTQGIGF IA RLGLEGA+VV+SSRKQKNVDEAV KLKA+GIE
Sbjct: 6   KKMIGRRFEGKVAIVTASTQGIGFAIAYRLGLEGAAVVISSRKQKNVDEAVEKLKAQGIE 65

Query: 63  VIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINV 122
           V+GVVCHVSN +QRKNLI+ T++K+GKIDVVVSNAAANPS D++L+T+ESVLDK+W+INV
Sbjct: 66  VLGVVCHVSNSKQRKNLIDTTVKKYGKIDVVVSNAAANPSTDALLETQESVLDKIWEINV 125

Query: 123 KSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT 182
           K+SILLLQ+AAPHLQKGSSVVLISSI GYQP +SMAMYGVTKTALLGLTKALA EMAP  
Sbjct: 126 KASILLLQEAAPHLQKGSSVVLISSITGYQPPASMAMYGVTKTALLGLTKALAEEMAPYV 185

Query: 183 RVNCVAPGFVPTHFAEYITSNDGVVSSV 210
           RVNCVAPGFVPT+FA+Y+T N+ + +S+
Sbjct: 186 RVNCVAPGFVPTNFADYLTRNEDIRNSL 213

Source: Erythroxylum coca

Species: Erythroxylum coca

Genus: Erythroxylum

Family: Erythroxylaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255632703|gb|ACU16703.1| unknown [Glycine max]

 Score =  343 bits (881), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 162/203 (79%), Positives = 189/203 (93%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV 63
           M+  KRF+GKVAIVTASTQGIG  IAERLGLEGASVV+SSRKQ+NVD A  +L+A+GI+V
Sbjct: 1   METPKRFEGKVAIVTASTQGIGLAIAERLGLEGASVVISSRKQQNVDAAAEQLRAKGIQV 60

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVK 123
           +GVVCHVS+ QQRKNLI++T++K+GKIDVVVSNAAANPSVD+ILQTK+SVLDKLW+INVK
Sbjct: 61  LGVVCHVSSAQQRKNLIDKTVQKYGKIDVVVSNAAANPSVDAILQTKDSVLDKLWEINVK 120

Query: 124 SSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTR 183
           ++ILLL+DA PHLQKGSSVV+ISSIAG+ P  S+AMYGVTKTALLGLTKALAAEMAP+TR
Sbjct: 121 ATILLLKDAVPHLQKGSSVVIISSIAGFNPPPSLAMYGVTKTALLGLTKALAAEMAPNTR 180

Query: 184 VNCVAPGFVPTHFAEYITSNDGV 206
           VNCVAPGFVPT+FA +ITSND V
Sbjct: 181 VNCVAPGFVPTNFASFITSNDAV 203

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351724665|ref|NP_001238345.1| peroxisomal short-chain dehydrogenase/reductase family protein [Glycine max] gi|167962017|dbj|BAG09366.1| peroxisomal short-chain dehydrogenase/reductase family protein [Glycine max]

 Score =  343 bits (880), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 162/203 (79%), Positives = 189/203 (93%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV 63
           M+  KRF+GKVAIVTASTQGIG  IAERLGLEGASVV+SSRKQ+NVD A  +L+A+GI+V
Sbjct: 1   METPKRFEGKVAIVTASTQGIGLAIAERLGLEGASVVISSRKQQNVDAAAEQLRAKGIQV 60

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVK 123
           +GVVCHVS+ QQRKNLI++T++K+GKIDVVVSNAAANPSVD+ILQTK+SVLDKLW+INVK
Sbjct: 61  LGVVCHVSSAQQRKNLIDKTVQKYGKIDVVVSNAAANPSVDAILQTKDSVLDKLWEINVK 120

Query: 124 SSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTR 183
           ++ILLL+DA PHLQKGSSVV+ISSIAG+ P  S+AMYGVTKTALLGLTKALAAEMAP+TR
Sbjct: 121 ATILLLKDAVPHLQKGSSVVIISSIAGFNPPPSLAMYGVTKTALLGLTKALAAEMAPNTR 180

Query: 184 VNCVAPGFVPTHFAEYITSNDGV 206
           VNCVAPGFVPT+FA +ITSND V
Sbjct: 181 VNCVAPGFVPTNFASFITSNDAV 203

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224113857|ref|XP_002316593.1| predicted protein [Populus trichocarpa] gi|118487888|gb|ABK95766.1| unknown [Populus trichocarpa] gi|222859658|gb|EEE97205.1| predicted protein [Populus trichocarpa]

 Score =  340 bits (873), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 159/213 (74%), Positives = 184/213 (86%)

Query: 3   KMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIE 62
           K+   KRF+GKV IVTASTQGIGF IAER GLEGASVV+SSRKQKNVDEA  KLKA+GI+
Sbjct: 4   KIISGKRFEGKVVIVTASTQGIGFSIAERFGLEGASVVISSRKQKNVDEAAEKLKAKGIK 63

Query: 63  VIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINV 122
           V+GVVCHVSN QQRKNLI  T++K+GKID+VVSNAA NPS DSIL+T+ESVLDKLW+INV
Sbjct: 64  VLGVVCHVSNAQQRKNLIETTVQKYGKIDIVVSNAAVNPSTDSILETQESVLDKLWEINV 123

Query: 123 KSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT 182
           K++ILLL+DA PH++KGSSV+LISSI GY P SSMAMYGVTKTAL GLTK LAAEMAP T
Sbjct: 124 KAAILLLKDATPHMKKGSSVILISSIGGYHPHSSMAMYGVTKTALFGLTKVLAAEMAPHT 183

Query: 183 RVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKL 215
           RVNC+APGFVPTHFA++IT N  +  ++    L
Sbjct: 184 RVNCIAPGFVPTHFADFITGNQTIRKTIEDQTL 216

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357480421|ref|XP_003610496.1| Dehydrogenase/reductase SDR family member [Medicago truncatula] gi|355511551|gb|AES92693.1| Dehydrogenase/reductase SDR family member [Medicago truncatula]

 Score =  335 bits (860), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 160/200 (80%), Positives = 185/200 (92%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV 63
           M++ KRF+GKVAIVTASTQGIGF IAERLGLEGASVV+SSR+QKNVD A  KL+A+GI+V
Sbjct: 1   MEIPKRFKGKVAIVTASTQGIGFTIAERLGLEGASVVISSRRQKNVDVAAEKLRAKGIDV 60

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVK 123
             VVCHVSN  QRK+LI++T++K+GKIDVVVSNAAANPSVDSILQT++SVLDKLW+INVK
Sbjct: 61  FAVVCHVSNALQRKDLIDKTVQKYGKIDVVVSNAAANPSVDSILQTQDSVLDKLWEINVK 120

Query: 124 SSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTR 183
           ++ILLL+DAAP+L KGSSVV+ISSIAGY P +SMAMYGVTKTALLGLTKALA EMAP TR
Sbjct: 121 ATILLLKDAAPYLPKGSSVVIISSIAGYHPPASMAMYGVTKTALLGLTKALAGEMAPKTR 180

Query: 184 VNCVAPGFVPTHFAEYITSN 203
           VNCVAPGFVPT+FA +ITSN
Sbjct: 181 VNCVAPGFVPTNFASFITSN 200

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297813813|ref|XP_002874790.1| short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata] gi|297320627|gb|EFH51049.1| short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  334 bits (857), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 158/206 (76%), Positives = 182/206 (88%), Gaps = 1/206 (0%)

Query: 1   MEKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG 60
           MEK K+ +R +GKVAIVTASTQGIGFGI ER GLEGASVVVSSRKQ NVDEAV KLK++G
Sbjct: 1   MEK-KLPRRLEGKVAIVTASTQGIGFGIIERFGLEGASVVVSSRKQANVDEAVAKLKSKG 59

Query: 61  IEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDI 120
           I+  G+VCHVSN Q R+NL+ +T++K+GKID+VV NAAANPS D IL +KE+VLDKLW+I
Sbjct: 60  IDAYGIVCHVSNAQHRRNLVEKTVQKYGKIDIVVCNAAANPSTDPILSSKEAVLDKLWEI 119

Query: 121 NVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP 180
           NVKSSILLLQD APHL+KGSSV+ I+SIAG+QPQ +MAMYGVTKTALLGLTKALAAEMAP
Sbjct: 120 NVKSSILLLQDMAPHLEKGSSVIFITSIAGFQPQGAMAMYGVTKTALLGLTKALAAEMAP 179

Query: 181 DTRVNCVAPGFVPTHFAEYITSNDGV 206
           DTRVN VAPGFVPTHFA +IT +  V
Sbjct: 180 DTRVNAVAPGFVPTHFASFITGSSEV 205

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	226
TAIR|locus:2135467	254	IBR1 "indole-3-butyric acid re	0.893	0.795	0.645	1.5e-65
FB|FBgn0035588	317	CG10672 [Drosophila melanogast	0.871	0.621	0.45	2e-40
ZFIN|ZDB-GENE-040426-1498	276	zgc:65987 "zgc:65987" [Danio r	0.884	0.724	0.428	1.3e-38
UNIPROTKB|D3DS54	280	DHRS2 "Dehydrogenase/reductase	0.849	0.685	0.396	4e-35
UNIPROTKB|Q13268	258	DHRS2 "Dehydrogenase/reductase	0.849	0.744	0.396	4e-35
UNIPROTKB|F1MZD5	279	DHRS4 "Dehydrogenase/reductase	0.884	0.716	0.4	8.3e-35
UNIPROTKB|Q8SPU8	279	DHRS4 "Dehydrogenase/reductase	0.884	0.716	0.4	1.3e-34
UNIPROTKB|C9JZP6	225	DHRS2 "Dehydrogenase/reductase	0.823	0.826	0.404	1.3e-34
UNIPROTKB|E2R1S9	259	DHRS2 "Uncharacterized protein	0.849	0.741	0.405	1.7e-34
UNIPROTKB|Q9BTZ2	278	DHRS4 "Dehydrogenase/reductase	0.884	0.719	0.4	3.6e-34

TAIR|locus:2135467 IBR1 "indole-3-butyric acid response 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 667 (239.9 bits), Expect = 1.5e-65, P = 1.5e-65
 Identities = 131/203 (64%), Positives = 154/203 (75%)

Query:     1 MEKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG 60
             MEK K+ +R +GKVAIVTASTQGIGFGI ER GLEGASVVVSSRKQ NVDEAV KLK++G
Sbjct:     1 MEK-KLPRRLEGKVAIVTASTQGIGFGITERFGLEGASVVVSSRKQANVDEAVAKLKSKG 59

Query:    61 IEVIGVVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDI 120
             I+  G+VCHVSN Q R+NL+ +T++K+GKI               IL +KE+VLDKLW+I
Sbjct:    60 IDAYGIVCHVSNAQHRRNLVEKTVQKYGKIDIVVCNAAANPSTDPILSSKEAVLDKLWEI 119

Query:   121 NVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP 180
             NVKSSILLLQD APHL+KGSSV+ I+SIAG+ PQ +MAMYGV              EMAP
Sbjct:   120 NVKSSILLLQDMAPHLEKGSSVIFITSIAGFSPQGAMAMYGVTKTALLGLTKALAAEMAP 179

Query:   181 DTRVNCVAPGFVPTHFAEYITSN 203
             DTRVN VAPGFVPTHFA +IT +
Sbjct:   180 DTRVNAVAPGFVPTHFASFITGS 202

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0005777 "peroxisome" evidence=IDA

GO:0080024 "indolebutyric acid metabolic process" evidence=IMP

GO:0080026 "response to indolebutyric acid stimulus" evidence=IMP

GO:0048767 "root hair elongation" evidence=IMP

FB|FBgn0035588 CG10672 [Drosophila melanogaster (taxid:7227)]

 Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
 Identities = 90/200 (45%), Positives = 122/200 (61%)

Query:     8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
             KR  GKVA+VTAST GIGF IA+RL  +GA+VV+SSRKQKNVD A+ +L+   + V G+ 
Sbjct:    67 KRLAGKVAVVTASTDGIGFAIAKRLAEDGAAVVISSRKQKNVDSALAELRKLNLNVHGLK 126

Query:    68 CHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSIL 127
             CHVS  + RK L  +TI KFGK+               +L+  E V DK++D+NVKSS L
Sbjct:   127 CHVSEPEDRKQLFEETISKFGKLNILVSNAATNPAVGGVLECDEKVWDKIFDVNVKSSYL 186

Query:   128 LLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPD-TRV 184
             L ++A P L  QK SS+V +SSIAGY     +  Y V              ++AP+  RV
Sbjct:   187 LAKEALPLLRQQKNSSIVFVSSIAGYDAFELLGAYSVSKTALIGLTKAAAKDLAPEGIRV 246

Query:   185 NCVAPGFVPTHFAEYITSND 204
             NC+APG + T F++ +  N+
Sbjct:   247 NCLAPGVIRTKFSKALYENE 266

GO:0016614 "oxidoreductase activity, acting on CH-OH group of donors" evidence=ISS

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

ZFIN|ZDB-GENE-040426-1498 zgc:65987 "zgc:65987" [Danio rerio (taxid:7955)]

 Score = 413 (150.4 bits), Expect = 1.3e-38, P = 1.3e-38
 Identities = 87/203 (42%), Positives = 119/203 (58%)

Query:     6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
             +++   GKVAIVTAST GIG   AE LG  GA VVVSSR+Q NVD+AV  L+++ I+VIG
Sbjct:    24 ISQNLSGKVAIVTASTDGIGLAAAEALGQRGAHVVVSSRRQTNVDKAVSLLRSKNIKVIG 83

Query:    66 VVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSS 125
               C+V   + R+ LIN T+E+ G +               IL + E V DK+  +NVK+S
Sbjct:    84 TTCNVGKAEDREKLINMTVEQCGGVDILVSNAAVNPFFGNILDSTEEVWDKILGVNVKAS 143

Query:   126 ILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPDT- 182
              LL +   PH++K  G SVV++SS+AGYQP  ++  Y V              E+A    
Sbjct:   144 FLLTKMVVPHIEKRGGGSVVIVSSVAGYQPMPALGPYSVSKTALLGLTRALAPELAQSNI 203

Query:   183 RVNCVAPGFVPTHFAEYITSNDG 205
             RVNCVAPG + T F+  +  N+G
Sbjct:   204 RVNCVAPGIIKTRFSSALWENEG 226

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

UNIPROTKB|D3DS54 DHRS2 "Dehydrogenase/reductase SDR family member 2" [Homo sapiens (taxid:9606)]

 Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
 Identities = 77/194 (39%), Positives = 110/194 (56%)

Query:    13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
             +VA+VT ST GIGF IA RL  +GA VV+SSRKQ+NVD A+ KL+  G+ V G+VCHV  
Sbjct:    37 RVAVVTGSTSGIGFAIARRLARDGAHVVISSRKQQNVDRAMAKLQGEGLSVAGIVCHVGK 96

Query:    73 GQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLLQDA 132
              + R+ L+ + +E  G +                L T E + DK+  +NVKS  LLL   
Sbjct:    97 AEDREQLVAKALEHCGGVDFLVCSAGVNPLVGSTLGTSEQIWDKILSVNVKSPALLLSQL 156

Query:   133 APHLQ-KGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNCVAPG 190
              P+++ +  +V+L+SSIA Y P  ++ +Y V              E+AP D RVNCV PG
Sbjct:   157 LPYMENRRGAVILVSSIAAYNPVVALGVYNVSKTALLGLTRTLALELAPKDIRVNCVVPG 216

Query:   191 FVPTHFAEYITSND 204
              + T F++    N+
Sbjct:   217 IIKTDFSKVFHGNE 230

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

UNIPROTKB|Q13268 DHRS2 "Dehydrogenase/reductase SDR family member 2" [Homo sapiens (taxid:9606)]

 Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
 Identities = 77/194 (39%), Positives = 110/194 (56%)

Query:    13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
             +VA+VT ST GIGF IA RL  +GA VV+SSRKQ+NVD A+ KL+  G+ V G+VCHV  
Sbjct:    15 RVAVVTGSTSGIGFAIARRLARDGAHVVISSRKQQNVDRAMAKLQGEGLSVAGIVCHVGK 74

Query:    73 GQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLLQDA 132
              + R+ L+ + +E  G +                L T E + DK+  +NVKS  LLL   
Sbjct:    75 AEDREQLVAKALEHCGGVDFLVCSAGVNPLVGSTLGTSEQIWDKILSVNVKSPALLLSQL 134

Query:   133 APHLQ-KGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNCVAPG 190
              P+++ +  +V+L+SSIA Y P  ++ +Y V              E+AP D RVNCV PG
Sbjct:   135 LPYMENRRGAVILVSSIAAYNPVVALGVYNVSKTALLGLTRTLALELAPKDIRVNCVVPG 194

Query:   191 FVPTHFAEYITSND 204
              + T F++    N+
Sbjct:   195 IIKTDFSKVFHGNE 208

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008285 "negative regulation of cell proliferation" evidence=NAS

GO:0005635 "nuclear envelope" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0004090 "carbonyl reductase (NADPH) activity" evidence=IDA

GO:0009636 "response to toxic substance" evidence=IDA

GO:0043011 "myeloid dendritic cell differentiation" evidence=IEP

GO:0055114 "oxidation-reduction process" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0008207 "C21-steroid hormone metabolic process" evidence=NAS

GO:0005739 "mitochondrion" evidence=IDA

GO:0034599 "cellular response to oxidative stress" evidence=IDA

GO:0043066 "negative regulation of apoptotic process" evidence=IMP

UNIPROTKB|F1MZD5 DHRS4 "Dehydrogenase/reductase SDR family member 4" [Bos taurus (taxid:9913)]

 Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
 Identities = 82/205 (40%), Positives = 112/205 (54%)

Query:     1 MEKMKMAKR--FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA 58
             M    MA+R   + KVA+VTAST GIGF IA RL  +GA VVVSSRKQ+NVD AV  LK 
Sbjct:    20 MASCGMARRNPLENKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDRAVATLKG 79

Query:    59 RGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLW 118
              G+ V G VCHV   + R+ L+   ++  G +               ++   E V DK+ 
Sbjct:    80 EGLSVTGTVCHVGKAEDRERLVATAVKLHGGVDILISNAAVSPFFGSLMDVPEEVWDKIL 139

Query:   119 DINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXX 176
             D+NVK++ LL +   P + K  G S+V++SSIA Y P  S+  Y V              
Sbjct:   140 DVNVKATALLTKAVVPEMAKRGGGSIVIVSSIAAYSPFPSLGPYNVSKTALLGLTKNLAL 199

Query:   177 EMAP-DTRVNCVAPGFVPTHFAEYI 200
             E+A  + RVNC+APG + T F+  +
Sbjct:   200 ELAESNVRVNCLAPGLIRTSFSRVL 224

GO:0042574 "retinal metabolic process" evidence=IEA

GO:0005777 "peroxisome" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0001758 "retinal dehydrogenase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|Q8SPU8 DHRS4 "Dehydrogenase/reductase SDR family member 4" [Bos taurus (taxid:9913)]

 Score = 375 (137.1 bits), Expect = 1.3e-34, P = 1.3e-34
 Identities = 82/205 (40%), Positives = 111/205 (54%)

Query:     1 MEKMKMAKR--FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA 58
             M    MA+R     KVA+VTAST GIGF IA RL  +GA VVVSSRKQ+NVD AV  LK 
Sbjct:    20 MASCGMARRNPLDNKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDRAVATLKG 79

Query:    59 RGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLW 118
              G+ V G VCHV   + R+ L+   ++  G +               ++   E V DK+ 
Sbjct:    80 EGLSVTGTVCHVGKAEDRERLVATAVKLHGGVDILISNAAVSPFFGSLMDVPEEVWDKIL 139

Query:   119 DINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXX 176
             D+NVK++ LL +   P + K  G S+V++SSIA Y P  S+  Y V              
Sbjct:   140 DVNVKATALLTKAVVPEMAKRGGGSIVIVSSIAAYSPFPSLGPYNVSKTALLGLTKNLAL 199

Query:   177 EMAP-DTRVNCVAPGFVPTHFAEYI 200
             E+A  + RVNC+APG + T F+  +
Sbjct:   200 ELAESNVRVNCLAPGLIRTSFSRVL 224

GO:0005739 "mitochondrion" evidence=ISS

GO:0005777 "peroxisome" evidence=IEA

GO:0004090 "carbonyl reductase (NADPH) activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|C9JZP6 DHRS2 "Dehydrogenase/reductase SDR family member 2" [Homo sapiens (taxid:9606)]

 Score = 375 (137.1 bits), Expect = 1.3e-34, P = 1.3e-34
 Identities = 76/188 (40%), Positives = 108/188 (57%)

Query:    13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
             +VA+VT ST GIGF IA RL  +GA VV+SSRKQ+NVD A+ KL+  G+ V G+VCHV  
Sbjct:    37 RVAVVTGSTSGIGFAIARRLARDGAHVVISSRKQQNVDRAMAKLQGEGLSVAGIVCHVGK 96

Query:    73 GQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLLQDA 132
              + R+ L+ + +E  G +                L T E + DK+  +NVKS  LLL   
Sbjct:    97 AEDREQLVAKALEHCGGVDFLVCSAGVNPLVGSTLGTSEQIWDKILSVNVKSPALLLSQL 156

Query:   133 APHLQ-KGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNCVAPG 190
              P+++ +  +V+L+SSIA Y P  ++ +Y V              E+AP D RVNCV PG
Sbjct:   157 LPYMENRRGAVILVSSIAAYNPVVALGVYNVSKTALLGLTRTLALELAPKDIRVNCVVPG 216

Query:   191 FVPTHFAE 198
              + T F++
Sbjct:   217 IIKTDFSK 224

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

UNIPROTKB|E2R1S9 DHRS2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
 Identities = 79/195 (40%), Positives = 108/195 (55%)

Query:    13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
             +VA+VT +T GIGF IA RL  +GA VVVSSRKQ NVD AV  L+  G+ V G VCHV  
Sbjct:    15 RVAVVTGATDGIGFAIARRLARDGAHVVVSSRKQHNVDRAVAALQGEGLSVTGTVCHVGK 74

Query:    73 GQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLLQDA 132
              + R+ L+   +E +G +                LQ  E V DK+ D+NVKS  LLL   
Sbjct:    75 AEDRERLVATVLEHYGGLDFLVCNAAVNPLVRSTLQASEEVWDKILDVNVKSPALLLSQL 134

Query:   133 APHLQ-KG-SSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPD-TRVNCVAP 189
              PH++ +G  +V+L+SSIA Y P   +  Y V              E+AP   RVNC+ P
Sbjct:   135 LPHMENRGMGAVILVSSIAAYIPHVELGPYNVSKTALLGLTRTLSLELAPKGIRVNCLVP 194

Query:   190 GFVPTHFAEYITSND 204
             G + T+F++ +  N+
Sbjct:   195 GIIKTNFSKVLHMNE 209

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|Q9BTZ2 DHRS4 "Dehydrogenase/reductase SDR family member 4" [Homo sapiens (taxid:9606)]

 Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
 Identities = 82/205 (40%), Positives = 110/205 (53%)

Query:     1 MEKMKMAKR--FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA 58
             M    M +R     KVA+VTAST GIGF IA RL  +GA VVVSSRKQ+NVD+AV  L+ 
Sbjct:    19 MASSGMTRRDPLANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQG 78

Query:    59 RGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLW 118
              G+ V G VCHV   + R+ L+   ++  G I               I+   E V DK  
Sbjct:    79 EGLSVTGTVCHVGKAEDRERLVATAVKLHGGIDILVSNAAVNPFFGSIMDVTEEVWDKTL 138

Query:   119 DINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXX 176
             DINVK+  L+ +   P ++K  G SVV++SSIA + P    + Y V              
Sbjct:   139 DINVKAPALMTKAVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAI 198

Query:   177 EMAP-DTRVNCVAPGFVPTHFAEYI 200
             E+AP + RVNC+APG + T F+  +
Sbjct:   199 ELAPRNIRVNCLAPGLIKTSFSRML 223

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA;IDA

GO:0005739 "mitochondrion" evidence=ISS

GO:0055114 "oxidation-reduction process" evidence=IDA;TAS

GO:0006066 "alcohol metabolic process" evidence=IDA

GO:0008202 "steroid metabolic process" evidence=IDA

GO:0042180 "cellular ketone metabolic process" evidence=IDA

GO:0016655 "oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor" evidence=IDA

GO:0004090 "carbonyl reductase (NADPH) activity" evidence=IDA

GO:0000253 "3-keto sterol reductase activity" evidence=IDA

GO:0018455 "alcohol dehydrogenase [NAD(P)+

GO:0051262 "protein tetramerization" evidence=IDA

GO:0005777 "peroxisome" evidence=IDA

GO:0005778 "peroxisomal membrane" evidence=IDA

GO:0005102 "receptor binding" evidence=IPI

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.766
3rd Layer	1.5.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00011718001	SubName- Full=Chromosome undetermined scaffold_332, whole genome shotgun sequence; (253 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00023262001	SubName- Full=Chromosome chr8 scaffold_29, whole genome shotgun sequence; (286 aa)			•						0.485
	GSVIVG00023260001	SubName- Full=Chromosome chr8 scaffold_29, whole genome shotgun sequence; (286 aa)			•						0.480

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	226
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	7e-74
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-57
cd05233	234	cd05233, SDR_c, classical (c) SDRs	5e-52
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	4e-47
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-44
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	8e-44
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	7e-43
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	3e-42
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-40
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	4e-39
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-39
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	3e-38
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	4e-37
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	8e-37
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	1e-36
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	1e-36
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	8e-36
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	2e-35
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	9e-35
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	2e-34
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	3e-34
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	4e-34
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	5e-34
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	3e-33
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	5e-33
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	7e-33
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	8e-33
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	4e-32
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-32
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	7e-32
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	8e-32
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	9e-32
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	2e-31
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	3e-31
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	3e-31
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	4e-31
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	6e-31
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	2e-30
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	3e-30
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	5e-30
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	1e-29
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	1e-29
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	1e-29
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	2e-29
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	2e-29
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	3e-29
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	4e-29
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	5e-29
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	6e-29
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	7e-29
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	1e-28
PRK09135	249	PRK09135, PRK09135, pteridine reductase; Provision	1e-28
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	5e-28
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	5e-28
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	6e-28
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	6e-28
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	7e-28
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	8e-28
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	9e-28
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	1e-27
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	1e-27
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	2e-27
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	2e-27
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	4e-27
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	5e-27
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	5e-27
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	9e-27
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	1e-26
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	2e-26
TIGR03325	262	TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-	2e-26
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	3e-26
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	7e-26
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	9e-26
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	2e-25
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	2e-25
pfam13561	239	pfam13561, adh_short_C2, Enoyl-(Acyl carrier prote	2e-25
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	2e-25
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	3e-25
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-25
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	5e-25
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	7e-25
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	7e-25
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	1e-24
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	3e-24
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	3e-24
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	3e-24
PRK06128	300	PRK06128, PRK06128, oxidoreductase; Provisional	4e-24
PRK07576	264	PRK07576, PRK07576, short chain dehydrogenase; Pro	4e-24
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	5e-24
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	6e-24
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	6e-24
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	6e-24
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	7e-24
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	8e-24
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	9e-24
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	9e-24
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	2e-23
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	3e-23
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	4e-23
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	6e-23
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	7e-23
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	7e-23
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	1e-22
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	1e-22
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	4e-22
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	7e-22
PRK05717	255	PRK05717, PRK05717, oxidoreductase; Validated	8e-22
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	8e-22
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	9e-22
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	1e-21
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	1e-21
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	2e-21
PRK07985	294	PRK07985, PRK07985, oxidoreductase; Provisional	2e-21
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	2e-21
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	5e-21
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	5e-21
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	6e-21
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	6e-21
PRK12748	256	PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote	8e-21
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	8e-21
PRK05876	275	PRK05876, PRK05876, short chain dehydrogenase; Pro	1e-20
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	1e-20
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	3e-20
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	5e-20
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	9e-20
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	1e-19
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-19
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	1e-19
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	1e-19
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	1e-19
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-19
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	3e-19
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	4e-19
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	4e-19
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	5e-19
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	9e-19
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	1e-18
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	1e-18
PRK08993	253	PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog	2e-18
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	2e-18
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	3e-18
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	4e-18
PRK05875	276	PRK05875, PRK05875, short chain dehydrogenase; Pro	5e-18
PRK12747	252	PRK12747, PRK12747, short chain dehydrogenase; Pro	7e-18
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	8e-18
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	8e-18
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	9e-18
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	1e-17
PRK05786	238	PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-17
PRK12859	256	PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote	2e-17
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	3e-17
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	4e-17
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	5e-17
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	5e-17
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	7e-17
cd09763	265	cd09763, DHRS1-like_SDR_c, human dehydrogenase/red	9e-17
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	9e-17
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	2e-16
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	2e-16
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	4e-16
PRK12744	257	PRK12744, PRK12744, short chain dehydrogenase; Pro	4e-16
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	1e-15
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	1e-15
cd11731	198	cd11731, Lin1944_like_SDR_c, Lin1944 and related p	1e-15
PRK09134	258	PRK09134, PRK09134, short chain dehydrogenase; Pro	1e-15
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	2e-15
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	2e-15
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	2e-15
PRK12742	237	PRK12742, PRK12742, oxidoreductase; Provisional	4e-15
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	9e-15
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	1e-14
PRK08261	450	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-14
cd05372	250	cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP)	1e-14
PRK07041	230	PRK07041, PRK07041, short chain dehydrogenase; Pro	2e-14
TIGR01831	239	TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-prote	2e-14
PRK07791	286	PRK07791, PRK07791, short chain dehydrogenase; Pro	3e-14
cd05334	221	cd05334, DHPR_SDR_c_like, dihydropteridine reducta	3e-14
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	3e-14
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	4e-14
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-14
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	6e-14
cd09762	243	cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro	7e-14
PRK06139	330	PRK06139, PRK06139, short chain dehydrogenase; Pro	7e-14
cd05361	242	cd05361, haloalcohol_DH_SDR_c-like, haloalcohol de	9e-14
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	1e-13
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	1e-13
cd05373	238	cd05373, SDR_c10, classical (c) SDR, subgroup 10	1e-13
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	2e-13
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	2e-13
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	3e-13
PRK06482	276	PRK06482, PRK06482, short chain dehydrogenase; Pro	3e-13
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	4e-13
PRK08703	239	PRK08703, PRK08703, short chain dehydrogenase; Pro	5e-13
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	6e-13
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	6e-13
PRK12938	246	PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro	7e-13
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	8e-13
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	1e-12
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	1e-12
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	2e-12
PRK08339	263	PRK08339, PRK08339, short chain dehydrogenase; Pro	2e-12
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	3e-12
PRK08340	259	PRK08340, PRK08340, glucose-1-dehydrogenase; Provi	4e-12
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	1e-11
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	3e-11
PRK07370	258	PRK07370, PRK07370, enoyl-(acyl carrier protein) r	6e-11
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	6e-11
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	1e-10
TIGR02685	267	TIGR02685, pter_reduc_Leis, pteridine reductase	2e-10
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-10
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	3e-10
COG0623	259	COG0623, FabI, Enoyl-[acyl-carrier-protein]	4e-10
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	5e-10
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	6e-10
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	1e-09
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	1e-09
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	4e-09
PRK06079	252	PRK06079, PRK06079, enoyl-(acyl carrier protein) r	4e-09
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	5e-09
PRK06483	236	PRK06483, PRK06483, dihydromonapterin reductase; P	6e-09
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	8e-09
PRK07792	306	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-08
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	2e-08
PRK08416	260	PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydro	2e-08
PRK07775	274	PRK07775, PRK07775, short chain dehydrogenase; Pro	3e-08
PRK08415	274	PRK08415, PRK08415, enoyl-(acyl carrier protein) r	3e-08
PRK08594	257	PRK08594, PRK08594, enoyl-(acyl carrier protein) r	5e-07
cd08941	290	cd08941, 3KS_SDR_c, 3-keto steroid reductase, clas	5e-07
cd08951	260	cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13	1e-06
PRK08303	305	PRK08303, PRK08303, short chain dehydrogenase; Pro	1e-06
cd05322	257	cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehy	1e-06
PLN02780	320	PLN02780, PLN02780, ketoreductase/ oxidoreductase	1e-06
PRK09291	257	PRK09291, PRK09291, short chain dehydrogenase; Pro	2e-06
PRK08177	225	PRK08177, PRK08177, short chain dehydrogenase; Pro	1e-05
PRK06101	240	PRK06101, PRK06101, short chain dehydrogenase; Pro	1e-05
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	1e-05
PRK07533	258	PRK07533, PRK07533, enoyl-(acyl carrier protein) r	1e-05
PRK08159	272	PRK08159, PRK08159, enoyl-(acyl carrier protein) r	2e-05
cd02266	186	cd02266, SDR, Short-chain dehydrogenases/reductase	2e-05
cd11730	206	cd11730, Tthb094_like_SDR_c, Tthb094 and related p	3e-05
PRK06924	251	PRK06924, PRK06924, short chain dehydrogenase; Pro	3e-05
PRK06720	169	PRK06720, PRK06720, hypothetical protein; Provisio	3e-05
PRK05854	313	PRK05854, PRK05854, short chain dehydrogenase; Pro	3e-05
TIGR01500	256	TIGR01500, sepiapter_red, sepiapterin reductase	4e-05
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	6e-05
cd05328	250	cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de	8e-05
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	9e-05
PRK07024	257	PRK07024, PRK07024, short chain dehydrogenase; Pro	1e-04
PRK08251	248	PRK08251, PRK08251, short chain dehydrogenase; Pro	1e-04
PRK07578	199	PRK07578, PRK07578, short chain dehydrogenase; Pro	2e-04
cd09809	284	cd09809, human_WWOX_like_SDR_c-like, human WWOX (W	4e-04
PRK07023	243	PRK07023, PRK07023, short chain dehydrogenase; Pro	4e-04
PRK05993	277	PRK05993, PRK05993, short chain dehydrogenase; Pro	5e-04
PRK05599	246	PRK05599, PRK05599, hypothetical protein; Provisio	0.001
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	0.002
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	0.002
PRK06196	315	PRK06196, PRK06196, oxidoreductase; Provisional	0.003
PRK06197	306	PRK06197, PRK06197, short chain dehydrogenase; Pro	0.003

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score =  224 bits (572), Expect = 7e-74
 Identities = 97/210 (46%), Positives = 134/210 (63%), Gaps = 3/210 (1%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV 63
           +        KVA+VTAST GIG  IA RL  +GA VVVSSRKQ+NVD AV  L+  G+ V
Sbjct: 2   VTRRDPLANKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATLQGEGLSV 61

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVK 123
            G VCHV   + R+ L+   +   G +D++VSNAA NP   +IL + E V DK+ D+NVK
Sbjct: 62  TGTVCHVGKAEDRERLVATAVNLHGGVDILVSNAAVNPFFGNILDSTEEVWDKILDVNVK 121

Query: 124 SSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP- 180
           ++ L+ +   P ++K  G SVV++SS+A + P   +  Y V+KTALLGLTK LA E+AP 
Sbjct: 122 ATALMTKAVVPEMEKRGGGSVVIVSSVAAFHPFPGLGPYNVSKTALLGLTKNLAPELAPR 181

Query: 181 DTRVNCVAPGFVPTHFAEYITSNDGVVSSV 210
           + RVNC+APG + T F+  +  +  V  S+
Sbjct: 182 NIRVNCLAPGLIKTSFSSALWMDKAVEESM 211

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  181 bits (462), Expect = 3e-57
 Identities = 74/194 (38%), Positives = 111/194 (57%), Gaps = 4/194 (2%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
            R +GKVAIVT ++ GIG GIA R   EGA VVV+ R ++  +    ++ A G   I V 
Sbjct: 1   MRLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGG-RAIAVA 59

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
             VS+    +  +   +E+FG +D++V+NA        +L   E+  D+++ +NVKS  L
Sbjct: 60  ADVSDEADVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYL 119

Query: 128 LLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RV 184
             Q A P +  + G ++V ++S AG +P+  +  Y  +K A++ LTKALAAE+ PD  RV
Sbjct: 120 WTQAAVPAMRGEGGGAIVNVASTAGLRPRPGLGWYNASKGAVITLTKALAAELGPDKIRV 179

Query: 185 NCVAPGFVPTHFAE 198
           N VAP  V T   E
Sbjct: 180 NAVAPVVVETGLLE 193

Length = 251

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score =  167 bits (425), Expect = 5e-52
 Identities = 69/183 (37%), Positives = 108/183 (59%), Gaps = 5/183 (2%)

Query: 15  AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQ 74
           A+VT ++ GIG  IA RL  EGA VV++ R ++ + E    ++A G   + V   VS+ +
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLADRNEEALAELA-AIEALGGNAVAVQADVSDEE 59

Query: 75  QRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAP 134
             + L+ + +E+FG++D++V+NA        + +  +   D++ D+N+    LL + A P
Sbjct: 60  DVEALVEEALEEFGRLDILVNNAGIARP-GPLEELTDEDWDRVLDVNLTGVFLLTRAALP 118

Query: 135 HL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNCVAPGF 191
           H+  Q G  +V ISS+AG +P    A Y  +K AL GLT++LA E+AP   RVN VAPG 
Sbjct: 119 HMKKQGGGRIVNISSVAGLRPLPGQAAYAASKAALEGLTRSLALELAPYGIRVNAVAPGL 178

Query: 192 VPT 194
           V T
Sbjct: 179 VDT 181

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score =  155 bits (394), Expect = 4e-47
 Identities = 74/202 (36%), Positives = 110/202 (54%), Gaps = 6/202 (2%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVV-SSRKQKNVDEAVVKL--KARGIEVIG 65
              GKVA+VT ++ GIG  IA  L  EGA VVV + R ++   EA+     +A G     
Sbjct: 2   DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAA 61

Query: 66  VVCHVSNG-QQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKS 124
           V   VS+  +  + L+    E+FG+ID++V+NA        + +  E   D++ D+N+  
Sbjct: 62  VAADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLG 121

Query: 125 SILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TR 183
           + LL + A P ++K   +V ISS+AG       A Y  +K AL+GLTKALA E+AP   R
Sbjct: 122 AFLLTRAALPLMKKQ-RIVNISSVAGLGGPPGQAAYAASKAALIGLTKALALELAPRGIR 180

Query: 184 VNCVAPGFVPTHFAEYITSNDG 205
           VN VAPG++ T     + S + 
Sbjct: 181 VNAVAPGYIDTPMTAALESAEL 202

Length = 251

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  148 bits (376), Expect = 2e-44
 Identities = 73/201 (36%), Positives = 113/201 (56%), Gaps = 5/201 (2%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK-LKARGIEVIGV 66
            +  GKVAIVT ++ GIG  IAE L  EGA VV++    +   + +++ +K  G + I V
Sbjct: 1   MKLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAV 60

Query: 67  VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSI 126
              VS+ +  +NL+ Q +EKFGKID++V+NA  + +   +    +   D++ D+N+   +
Sbjct: 61  KADVSSEEDVENLVEQIVEKFGKIDILVNNAGIS-NFGLVTDMTDEEWDRVIDVNLTGVM 119

Query: 127 LLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TR 183
           LL + A P++  +K   +V ISSI G    S   +Y  +K A+   TKALA E+AP   R
Sbjct: 120 LLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYSASKGAVNAFTKALAKELAPSGIR 179

Query: 184 VNCVAPGFVPTHFAEYITSND 204
           VN VAPG + T      +  D
Sbjct: 180 VNAVAPGAIDTEMWSSFSEED 200

Length = 247

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  146 bits (372), Expect = 8e-44
 Identities = 62/190 (32%), Positives = 100/190 (52%), Gaps = 4/190 (2%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
              QGK A+VT +++GIG  IA RL  +GA VV+    ++  +    +L+A G E   +V
Sbjct: 1   MSLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLV 60

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
             VS+    + LI   +E FG +D++V+NA        + +  E   D++ D+N+  +  
Sbjct: 61  FDVSDEAAVRALIEAAVEAFGALDILVNNAGITRDA-LLPRMSEEDWDRVIDVNLTGTFN 119

Query: 128 LLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RV 184
           +++ A P +   +   +V ISS++G         Y   K  ++G TKALA E+A     V
Sbjct: 120 VVRAALPPMIKARYGRIVNISSVSGVTGNPGQTNYSAAKAGVIGFTKALALELASRGITV 179

Query: 185 NCVAPGFVPT 194
           N VAPGF+ T
Sbjct: 180 NAVAPGFIDT 189

Length = 246

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score =  144 bits (366), Expect = 7e-43
 Identities = 70/198 (35%), Positives = 107/198 (54%), Gaps = 3/198 (1%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
           GK+A+VT +++GIG  IA+ L  +GA V+VSSRK          + A G +   + CH+ 
Sbjct: 8   GKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIG 67

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQD 131
             +Q   L     E+ G++D++V+NAAANP    IL T      K  D+N++    +  +
Sbjct: 68  EMEQIDALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVE 127

Query: 132 AAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNCVA 188
           A   +  Q G S+V ++S+ G  P     +Y +TK A++ +TKA A E AP   RVN + 
Sbjct: 128 AGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSITKAAVISMTKAFAKECAPFGIRVNALL 187

Query: 189 PGFVPTHFAEYITSNDGV 206
           PG   T FA  +  ND +
Sbjct: 188 PGLTDTKFASALFKNDAI 205

Length = 252

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score =  143 bits (362), Expect = 3e-42
 Identities = 69/195 (35%), Positives = 110/195 (56%), Gaps = 15/195 (7%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHV 70
            GK A+VT  ++G+G  IAE LG  GA VV+S+RK + ++EA   L+A GI+ + +   V
Sbjct: 11  SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADV 70

Query: 71  SNGQQRKNLINQTIEKFGKIDVVVSNAAAN---PSVDSILQTKESVLDKLWDINVKSSIL 127
           ++    + L  +T+E+FG +D++V+NA A    P+ D  ++      DK+ ++NV+   L
Sbjct: 71  ADEADIERLAEETLERFGHVDILVNNAGATWGAPAEDHPVEA----WDKVMNLNVRGLFL 126

Query: 128 LLQDAAPHL---QKGSSVVLISSIAGYQPQSSMAM----YGVTKTALLGLTKALAAEMAP 180
           L Q  A      +    ++ ++S+AG        M    Y  +K A++  T+ALAAE  P
Sbjct: 127 LSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAYNTSKGAVINFTRALAAEWGP 186

Query: 181 -DTRVNCVAPGFVPT 194
              RVN +APGF PT
Sbjct: 187 HGIRVNAIAPGFFPT 201

Length = 259

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  137 bits (346), Expect = 6e-40
 Identities = 73/192 (38%), Positives = 115/192 (59%), Gaps = 8/192 (4%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK-NVDEAVVKLKARGIEVIGVVCH 69
           + KV +VT S +GIG  IA RL  EG+ VVV+++K+   ++E +  +K  G E IGV+  
Sbjct: 5   KDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLAD 64

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAA---ANPSVDSILQTKESVLDKLWDINVKSSI 126
           VS  +  + L   TI+++G  D++V+NA     +P     L   + ++DK    + KS I
Sbjct: 65  VSTREGCETLAKATIDRYGVADILVNNAGLGLFSP----FLNVDDKLIDKHISTDFKSVI 120

Query: 127 LLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNC 186
              Q+ A  +++G ++V I+S+AG +P   +++YG  K A++ LTK LA E+AP  RVN 
Sbjct: 121 YCSQELAKEMREGGAIVNIASVAGIRPAYGLSIYGAMKAAVINLTKYLALELAPKIRVNA 180

Query: 187 VAPGFVPTHFAE 198
           +APGFV T   E
Sbjct: 181 IAPGFVKTKLGE 192

Length = 252

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score =  135 bits (341), Expect = 4e-39
 Identities = 59/186 (31%), Positives = 107/186 (57%), Gaps = 4/186 (2%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
           GKVA+VTA++ GIG  IA  L  EGA V + +R ++N++ A  +L+A G  V+ VV  ++
Sbjct: 1   GKVALVTAASSGIGLAIARALAREGARVAICARNRENLERAASELRAGGAGVLAVVADLT 60

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQD 131
           + +    L+ +  + FG++D++V+N A  P      +  +    + +D+ + S I +++ 
Sbjct: 61  DPEDIDRLVEKAGDAFGRVDILVNN-AGGPPPGPFAELTDEDWLEAFDLKLLSVIRIVRA 119

Query: 132 AAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNCVA 188
             P +  +    +V ISS+   +P+ ++ +  V +  L+GL K L+ E+APD   VN V 
Sbjct: 120 VLPGMKERGWGRIVNISSLTVKEPEPNLVLSNVARAGLIGLVKTLSRELAPDGVTVNSVL 179

Query: 189 PGFVPT 194
           PG++ T
Sbjct: 180 PGYIDT 185

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  134 bits (340), Expect = 6e-39
 Identities = 63/191 (32%), Positives = 106/191 (55%), Gaps = 5/191 (2%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK-LKARGIEVIGV 66
              +GKVA+VT +++GIG  IAERL  +GA+VV++    +   EA+V  + A G + + V
Sbjct: 1   MSLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAV 60

Query: 67  VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSI 126
              VS+ +  +  +++   +FG +D++V+NA      + +++ KE   D++ D N+    
Sbjct: 61  QGDVSDAESVERAVDEAKAEFGGVDILVNNAGIT-RDNLLMRMKEEDWDRVIDTNLTGVF 119

Query: 127 LLLQDAAPHLQKGSS--VVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTR 183
            L +  A  + K  S  ++ ISS+ G       A Y  +K  ++G TK+LA E+A     
Sbjct: 120 NLTKAVARPMMKQRSGRIINISSVVGLMGNPGQANYAASKAGVIGFTKSLARELASRGIT 179

Query: 184 VNCVAPGFVPT 194
           VN VAPGF+ T
Sbjct: 180 VNAVAPGFIET 190

Length = 248

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score =  132 bits (335), Expect = 3e-38
 Identities = 63/196 (32%), Positives = 104/196 (53%), Gaps = 4/196 (2%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHV 70
           +GKVA+VT +++GIGFGIA  L   GA++V++SR ++  +EA   ++  G+E     C V
Sbjct: 4   KGKVALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKEGVEATAFTCDV 63

Query: 71  SNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQ 130
           S+ +  K  +    E FGKID++V+NA       +  +  E+    + D+N+     + Q
Sbjct: 64  SDEEAIKAAVEAIEEDFGKIDILVNNAGIIRRHPAE-EFPEAEWRDVIDVNLNGVFFVSQ 122

Query: 131 DAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNCV 187
             A H+  Q    ++ I S+        +  Y  +K  + GLTKALA E A    +VN +
Sbjct: 123 AVARHMIKQGHGKIINICSLLSELGGPPVPAYAASKGGVAGLTKALATEWARHGIQVNAI 182

Query: 188 APGFVPTHFAEYITSN 203
           APG+  T   E + ++
Sbjct: 183 APGYFATEMTEAVVAD 198

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score =  129 bits (327), Expect = 4e-37
 Identities = 65/197 (32%), Positives = 98/197 (49%), Gaps = 17/197 (8%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
           +  +G+VA+VT + +GIG  IA RL  +GA V+V      +       ++A G +     
Sbjct: 2   RDLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQ 61

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLW----DINVK 123
             V +    K  +   +E FG++D++V+NA   P     L     + D+ W    D+N+ 
Sbjct: 62  VDVRDRAALKAAVAAGVEDFGRLDILVANAGIFP-----LTPFAEMDDEQWERVIDVNLT 116

Query: 124 SSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSM---AMYGVTKTALLGLTKALAAEM 178
            + LL Q A P L +  G  +VL SS+AG  P+      A Y  +K  L+G T+ALA E+
Sbjct: 117 GTFLLTQAALPALIRAGGGRIVLTSSVAG--PRVGYPGLAHYAASKAGLVGFTRALALEL 174

Query: 179 APDT-RVNCVAPGFVPT 194
           A     VN V PG V T
Sbjct: 175 AARNITVNSVHPGGVDT 191

Length = 251

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score =  128 bits (325), Expect = 8e-37
 Identities = 65/188 (34%), Positives = 102/188 (54%), Gaps = 3/188 (1%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGVVCH 69
            GKVA+VT +++GIG  IA+RL  +GASVVV+ +  +   +E V +++A G + I V   
Sbjct: 2   AGKVALVTGASRGIGRAIAKRLARDGASVVVNYASSKAAAEEVVAEIEAAGGKAIAVQAD 61

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLL 129
           VS+  Q   L +   + FG +D++V+NA        I +T E   D+++ +N K +  +L
Sbjct: 62  VSDPSQVARLFDAAEKAFGGVDILVNNAGVMLKKP-IAETSEEEFDRMFTVNTKGAFFVL 120

Query: 130 QDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVA 188
           Q+AA  L+ G  ++ ISS        +   Y  +K A+   T+ LA E+      VN VA
Sbjct: 121 QEAAKRLRDGGRIINISSSLTAAYTPNYGAYAGSKAAVEAFTRVLAKELGGRGITVNAVA 180

Query: 189 PGFVPTHF 196
           PG V T  
Sbjct: 181 PGPVDTDM 188

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score =  128 bits (324), Expect = 1e-36
 Identities = 56/193 (29%), Positives = 97/193 (50%), Gaps = 12/193 (6%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKL-KARGIEVIGVVC 68
            +GKVA +T    GIG  IA+     GASV ++ RK + ++ A  ++  A G     + C
Sbjct: 1   LKGKVAFITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEISSATGGRAHPIQC 60

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAAN---PSVDSILQTKESVLDKLWDINVKSS 125
            V + +  +  +++T+++FGKID++++NAA N   P+        ++V+    DI++  +
Sbjct: 61  DVRDPEAVEAAVDETLKEFGKIDILINNAAGNFLAPAESLSPNGFKTVI----DIDLNGT 116

Query: 126 ILLLQDAAPHL---QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD- 181
               +     L   + G S++ IS+   Y            K  +  LT++LA E  P  
Sbjct: 117 FNTTKAVGKRLIEAKHGGSILNISATYAYTGSPFQVHSAAAKAGVDALTRSLAVEWGPYG 176

Query: 182 TRVNCVAPGFVPT 194
            RVN +APG +PT
Sbjct: 177 IRVNAIAPGPIPT 189

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score =  128 bits (323), Expect = 1e-36
 Identities = 59/186 (31%), Positives = 101/186 (54%), Gaps = 6/186 (3%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           KVA+VT +++GIG  IA RL  EGA V V+ R ++   E V ++KA G     +   VS+
Sbjct: 1   KVALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIKALGGNAAALEADVSD 60

Query: 73  GQQRKNLINQTIEKFGKIDVVVSNAAANPSVDS-ILQTKESVLDKLWDINVKSSILLLQD 131
            +  + L+ +   +FG +D++V+NA    + D+ +++  E   D + ++N+     + Q 
Sbjct: 61  REAVEALVEKVEAEFGPVDILVNNAGI--TRDNLLMRMSEEDWDAVINVNLTGVFNVTQA 118

Query: 132 AAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVA 188
               +  ++   ++ ISS+ G       A Y  +K  ++G TK+LA E+A     VN VA
Sbjct: 119 VIRAMIKRRSGRIINISSVVGLIGNPGQANYAASKAGVIGFTKSLAKELASRGITVNAVA 178

Query: 189 PGFVPT 194
           PGF+ T
Sbjct: 179 PGFIDT 184

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score =  126 bits (318), Expect = 8e-36
 Identities = 73/206 (35%), Positives = 111/206 (53%), Gaps = 5/206 (2%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
             +GK A+VT  T+GIG+ I E L   GA V   +R QK +DE + + + +G +V G VC
Sbjct: 3   NLEGKTALVTGGTKGIGYAIVEELAGLGAEVYTCARNQKELDECLTEWREKGFKVEGSVC 62

Query: 69  HVSNGQQRKNLINQTIEKF-GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
            VS+  +R+ L++     F GK++++V+NA  N   ++   T+E     +   N +++  
Sbjct: 63  DVSSRSERQELMDTVASHFGGKLNILVNNAGTNIRKEAKDYTEED-YSLIMSTNFEAAYH 121

Query: 128 LLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RV 184
           L + A P L+     ++V ISS+AG     S A YG TK AL  LT++LA E A D  RV
Sbjct: 122 LSRLAHPLLKASGNGNIVFISSVAGVIAVPSGAPYGATKGALNQLTRSLACEWAKDNIRV 181

Query: 185 NCVAPGFVPTHFAEYITSNDGVVSSV 210
           N VAP  + T   E +      +  V
Sbjct: 182 NAVAPWVIATPLVEPVIQQKENLDKV 207

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score =  125 bits (317), Expect = 2e-35
 Identities = 60/189 (31%), Positives = 92/189 (48%), Gaps = 4/189 (2%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
             +GKVA+VT +  GIG  IA  L  EGA VV++    +    A   L+  G + IGV  
Sbjct: 1   MLKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAM 60

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
            V++ +     I+  +E FG +D++V+NA     V  I         K+  I +  + L 
Sbjct: 61  DVTDEEAINAGIDYAVETFGGVDILVNNAGIQ-HVAPIEDFPTEKWKKMIAIMLDGAFLT 119

Query: 129 LQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVN 185
            + A P +  Q G  ++ ++S+ G    +  A Y   K  L+GLTK +A E A     VN
Sbjct: 120 TKAALPIMKAQGGGRIINMASVHGLVGSAGKAAYVSAKHGLIGLTKVVALEGATHGVTVN 179

Query: 186 CVAPGFVPT 194
            + PG+V T
Sbjct: 180 AICPGYVDT 188

Length = 258

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score =  123 bits (311), Expect = 9e-35
 Identities = 65/185 (35%), Positives = 108/185 (58%), Gaps = 7/185 (3%)

Query: 15  AIVTASTQGIGFGIAERLGLEGASVVVSSRKQ-KNVDEAVVKLKARGIEVIGVVCHVSNG 73
           A+VT +++GIG  IA +L  EGA V+++ R   +  +E V +LKA G++ +GVVC VS+ 
Sbjct: 1   ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDR 60

Query: 74  QQRKNLINQTIEKFGKIDVVVSNAAANPSVDS-ILQTKESVLDKLWDINVKSSILLLQDA 132
           +  K ++ +  E+ G ID++V+NA    + D+ +++ KE   D + D N+     L Q  
Sbjct: 61  EDVKAVVEEIEEELGPIDILVNNAGI--TRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAV 118

Query: 133 APHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAP 189
              +  Q+   ++ ISS+ G    +  A Y  +K  ++G TK+LA E+A  +  VN VAP
Sbjct: 119 LRIMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIGFTKSLAKELASRNITVNAVAP 178

Query: 190 GFVPT 194
           GF+ T
Sbjct: 179 GFIDT 183

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score =  129 bits (326), Expect = 2e-34
 Identities = 62/191 (32%), Positives = 93/191 (48%), Gaps = 6/191 (3%)

Query: 3   KMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIE 62
           +M   K   GKVA+VT +  GIG   A+RL  EGA VV++   ++  + A  +L      
Sbjct: 413 RMPKPKPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPD-R 471

Query: 63  VIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINV 122
            +GV C V++    +    +    FG +D+VVSNA    S   I +T +    + +D+N 
Sbjct: 472 ALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGIAISGP-IEETSDEDWRRSFDVNA 530

Query: 123 KSSILLLQDAAPHL---QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMA 179
               L+ ++A   +     G S+V I+S     P  +   YG  K A L L + LA E+ 
Sbjct: 531 TGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGAAKAAELHLVRQLALELG 590

Query: 180 PD-TRVNCVAP 189
           PD  RVN V P
Sbjct: 591 PDGIRVNGVNP 601

Length = 681

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score =  122 bits (308), Expect = 3e-34
 Identities = 63/202 (31%), Positives = 100/202 (49%), Gaps = 10/202 (4%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
           R   +VA+VT + +G+G  IA      GA V++++R +  +DE   +++A G     V  
Sbjct: 7   RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAA 66

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSN---AAANPSVDSILQTKESVLDKLWDINVKSS 125
            +++ +    L  Q +E FG++D+VV+N      NP    +L T    L   +  NV ++
Sbjct: 67  DLAHPEATAGLAGQAVEAFGRLDIVVNNVGGTMPNP----LLSTSTKDLADAFTFNVATA 122

Query: 126 ILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT 182
             L   A P + +   G SV+ ISS  G       A YG  K AL   T+  A ++ P  
Sbjct: 123 HALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTAKAALAHYTRLAALDLCPRI 182

Query: 183 RVNCVAPGFVPTHFAEYITSND 204
           RVN +APG + T   E + +ND
Sbjct: 183 RVNAIAPGSILTSALEVVAAND 204

Length = 263

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score =  122 bits (307), Expect = 4e-34
 Identities = 71/192 (36%), Positives = 105/192 (54%), Gaps = 5/192 (2%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           KVA+VT   QGIG GIAERL  +G +V V+   ++   E   ++   G + +     VS+
Sbjct: 1   KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSD 60

Query: 73  GQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDA 132
             Q  + I+Q  EKFG  DV+V+NA   P +  IL+  E  L K++++NVK  +  +Q A
Sbjct: 61  KDQVFSAIDQAAEKFGGFDVMVNNAGVAP-ITPILEITEEELKKVYNVNVKGVLFGIQAA 119

Query: 133 APHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNCVA 188
           A   +K   G  ++  +SIAG++    ++ Y  TK A+ GLT+  A E+AP    VN   
Sbjct: 120 ARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVRGLTQTAAQELAPKGITVNAYC 179

Query: 189 PGFVPTHFAEYI 200
           PG V T   E I
Sbjct: 180 PGIVKTPMWEEI 191

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score =  122 bits (307), Expect = 5e-34
 Identities = 69/194 (35%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSS-RKQKNVDEAVVKLKARGIEVIGVVCHV 70
            KVAI+T + QGIG  IAERL  +G ++V++    ++     + ++   G   + V   V
Sbjct: 2   SKVAIITGAAQGIGRAIAERLAADGFNIVLADLNLEEAAKSTIQEISEAGYNAVAVGADV 61

Query: 71  SNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQ 130
           ++    + LI+Q +EKFG  DV+V+NA   P +  +L   E  L K++ +NV   +  +Q
Sbjct: 62  TDKDDVEALIDQAVEKFGSFDVMVNNAGIAP-ITPLLTITEEDLKKVYAVNVFGVLFGIQ 120

Query: 131 DAAPHLQK-GSSVVLI--SSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNC 186
            AA   +K G    +I  SSIAG Q   ++  Y  +K A+ GLT+  A E+AP    VN 
Sbjct: 121 AAARQFKKLGHGGKIINASSIAGVQGFPNLGAYSASKFAVRGLTQTAAQELAPKGITVNA 180

Query: 187 VAPGFVPTHFAEYI 200
            APG V T   +YI
Sbjct: 181 YAPGIVKTEMWDYI 194

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score =  120 bits (302), Expect = 3e-33
 Identities = 60/192 (31%), Positives = 103/192 (53%), Gaps = 6/192 (3%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI---EVIGV 66
             GKVAI+T S+ GIG G A      GA + ++ R  + ++E        G+   +++ V
Sbjct: 1   LSGKVAIITGSSSGIGAGTAILFARLGARLALTGRDAERLEETRQSCLQAGVSEKKILLV 60

Query: 67  VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSI 126
           V  ++  + +  +I+ T+ KFG++D++V+NA    +            DK+ ++N+++ I
Sbjct: 61  VADLTEEEGQDRIISTTLAKFGRLDILVNNAGI-LAKGGGEDQDIEEYDKVMNLNLRAVI 119

Query: 127 LLLQDAAPHLQKGS-SVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRV 184
            L + A PHL K    +V +SS+AG +    +  Y ++K AL   T+  A E+AP   RV
Sbjct: 120 YLTKLAVPHLIKTKGEIVNVSSVAGGRSFPGVLYYCISKAALDQFTRCTALELAPKGVRV 179

Query: 185 NCVAPGFVPTHF 196
           N V+PG + T F
Sbjct: 180 NSVSPGVIVTGF 191

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score =  118 bits (299), Expect = 5e-33
 Identities = 58/201 (28%), Positives = 106/201 (52%), Gaps = 12/201 (5%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
            +GKVA++T  ++GIGF IAE L  EG  V +++R QK ++EA  +L  +G  V+G+   
Sbjct: 4   LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKG-NVLGLAAD 62

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNA--AANPSVD--SILQTKESVLDKLWDINVKSS 125
           V +    +  ++  +  FG +DV+++NA       V+  +  + +  +     D N+  +
Sbjct: 63  VRDEADVQRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVI-----DTNLTGA 117

Query: 126 ILLLQDAAPHLQK-GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTR 183
              ++ A P L++ G  ++ ISS+AG    +  A Y  +K  L+G ++A   ++     +
Sbjct: 118 FYTIKAAVPALKRGGGYIINISSLAGTNFFAGGAAYNASKFGLVGFSEAAMLDLRQYGIK 177

Query: 184 VNCVAPGFVPTHFAEYITSND 204
           V+ + PG V THF  +  S  
Sbjct: 178 VSTIMPGSVATHFNGHTPSEK 198

Length = 237

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score =  118 bits (298), Expect = 7e-33
 Identities = 66/202 (32%), Positives = 99/202 (49%), Gaps = 3/202 (1%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
           M+  F GKVA+VT    GIG   A     EGA VVV+ R     +E V  ++  G E + 
Sbjct: 1   MSMTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALF 60

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSS 125
           V C V+   + K L+ QTI  +G++D   +NA        + +  E+  D +  +NVK  
Sbjct: 61  VACDVTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGV 120

Query: 126 ILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMA-PDT 182
            L ++   P +  Q G ++V  +S+AG      M++Y  +K A++GLTK+ A E A    
Sbjct: 121 WLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAASKHAVIGLTKSAAIEYAKKGI 180

Query: 183 RVNCVAPGFVPTHFAEYITSND 204
           RVN V P  + T         D
Sbjct: 181 RVNAVCPAVIDTDMFRRAYEAD 202

Length = 253

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score =  118 bits (298), Expect = 8e-33
 Identities = 64/192 (33%), Positives = 99/192 (51%), Gaps = 12/192 (6%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
             G+V +VT  T+GIG GIA      GA+VVV  R+     +       R  E       
Sbjct: 4   LTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPETVDG------RPAEFHA--AD 55

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLL 129
           V +  Q   L++  +E+ G++DV+V+NA  +P   +  +      +K+ ++N+ + +L+ 
Sbjct: 56  VRDPDQVAALVDAIVERHGRLDVLVNNAGGSPYALA-AEASPRFHEKIVELNLLAPLLVA 114

Query: 130 QDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNC 186
           Q A   +Q+   G S+V I S++G +P    A YG  K  LL LT++LA E AP  RVN 
Sbjct: 115 QAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAKAGLLNLTRSLAVEWAPKVRVNA 174

Query: 187 VAPGFVPTHFAE 198
           V  G V T  +E
Sbjct: 175 VVVGLVRTEQSE 186

Length = 252

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score =  116 bits (294), Expect = 4e-32
 Identities = 52/202 (25%), Positives = 92/202 (45%), Gaps = 4/202 (1%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
           MA    GK A+VT + +G+G   AE L   GA+V  +        E    L+A G     
Sbjct: 1   MASNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHA 60

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSS 125
           +   +++    +   +      G +D +V+NA    S  S  +      D + ++NV+ +
Sbjct: 61  IAADLADPASVQRFFDAAAAALGGLDGLVNNAGITNS-KSATELDIDTWDAVMNVNVRGT 119

Query: 126 ILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-T 182
            L+L+ A PHL       +V ++S         +  Y  +K A++G+T++LA E+     
Sbjct: 120 FLMLRAALPHLRDSGRGRIVNLASDTALWGAPKLGAYVASKGAVIGMTRSLARELGGRGI 179

Query: 183 RVNCVAPGFVPTHFAEYITSND 204
            VN +APG   T    Y+ +++
Sbjct: 180 TVNAIAPGLTATEATAYVPADE 201

Length = 250

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  116 bits (294), Expect = 4e-32
 Identities = 66/193 (34%), Positives = 98/193 (50%), Gaps = 11/193 (5%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK-NVDEAVVKLKARGIEVIGVV 67
              G+VA+VT + +G+G  IA RL   GA VVV  R  +   +E V  ++A G     V 
Sbjct: 3   SLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQ 62

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAA---ANPSVDSILQTKESVLDKLWDINVKS 124
             V++    +  +   +E+FG+ID++V+NA      P  D      + V+    D+N+  
Sbjct: 63  ADVTDKAALEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVI----DVNLSG 118

Query: 125 SILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-D 181
              LL+   P +  Q+G  +V ISS+AG       + Y   K  L+GLTKALA E+A   
Sbjct: 119 VFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYAAAKAGLVGLTKALARELAEYG 178

Query: 182 TRVNCVAPGFVPT 194
             VN VAPG + T
Sbjct: 179 ITVNMVAPGDIDT 191

Length = 249

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score =  116 bits (293), Expect = 7e-32
 Identities = 51/198 (25%), Positives = 84/198 (42%), Gaps = 10/198 (5%)

Query: 3   KMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIE 62
            + + K   G   +VT    GIG  IAE     GA V V    +  +     +L   G +
Sbjct: 2   AIDLLKPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLP--GAK 59

Query: 63  VIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINV 122
           V   V  V++  Q + + +  +E+FG +DV+V+NA        I +      ++   +N+
Sbjct: 60  VTATVADVADPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNL 119

Query: 123 KSSILLLQDAAPHLQKGSS--VVLISSIAGYQPQSSMAM---YGVTKTALLGLTKALAAE 177
                  + A P L+      V++  S      +        Y  +K A++GL K+LA E
Sbjct: 120 NGQFYFARAAVPLLKASGHGGVIIALSSVA--GRLGYPGRTPYAASKWAVVGLVKSLAIE 177

Query: 178 MAP-DTRVNCVAPGFVPT 194
           + P   RVN + PG V  
Sbjct: 178 LGPLGIRVNAILPGIVRG 195

Length = 264

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score =  116 bits (293), Expect = 8e-32
 Identities = 58/200 (29%), Positives = 106/200 (53%), Gaps = 8/200 (4%)

Query: 7   AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK--LKARGIEVI 64
           + + +GK A++T    GIG  +A     EGA V ++   ++  D    K  ++  G + +
Sbjct: 21  SGKLKGKKALITGGDSGIGRAVAIAFAREGADVAINYLPEEEDDAEETKKLIEEEGRKCL 80

Query: 65  GVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKS 124
            +   + +    ++L+ + +++FGK+D++V+NAA     +SI       L+K +  N+ S
Sbjct: 81  LIPGDLGDESFCRDLVKEVVKEFGKLDILVNNAAYQHPQESIEDITTEQLEKTFRTNIFS 140

Query: 125 SILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TR 183
              L + A PHL+KGSS++  +S+  Y+    +  Y  TK A++  T+ L+ ++A    R
Sbjct: 141 MFYLTKAALPHLKKGSSIINTTSVTAYKGSPHLLDYAATKGAIVAFTRGLSLQLAEKGIR 200

Query: 184 VNCVAPG-----FVPTHFAE 198
           VN VAPG      +P+ F E
Sbjct: 201 VNAVAPGPIWTPLIPSSFPE 220

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score =  115 bits (291), Expect = 9e-32
 Identities = 69/197 (35%), Positives = 112/197 (56%), Gaps = 9/197 (4%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGVV 67
            F GKVA+VT S++GIG  IA RL  EG  + V+ +R +K  +E   +++A G + + V 
Sbjct: 1   VFSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVK 60

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
            +V + ++ K +  Q  E+FG++DV V+NAA+   +   ++ +ES  D   +IN K+ + 
Sbjct: 61  ANVGDVEKIKEMFAQIDEEFGRLDVFVNNAASG-VLRPAMELEESHWDWTMNINAKALLF 119

Query: 128 LLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRV 184
             Q+AA  ++K  G  ++ +SS+   +   +    GV+K AL  LT+ LA E+AP    V
Sbjct: 120 CAQEAAKLMEKVGGGKIISLSSLGSIRYLENYTTVGVSKAALEALTRYLAVELAPKGIAV 179

Query: 185 NCVAPGFVPT----HFA 197
           N V+ G V T    HF 
Sbjct: 180 NAVSGGAVDTDALKHFP 196

Length = 250

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score =  115 bits (290), Expect = 2e-31
 Identities = 57/191 (29%), Positives = 100/191 (52%), Gaps = 6/191 (3%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
           R  GKVA+VT  TQG+G  IA      GA  +V+  R  +  +    +L+A G + + V 
Sbjct: 3   RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQ 62

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
             +S+ +  + ++    E FG++D +V NAA      +IL T   + D+ + +NV++   
Sbjct: 63  ADLSDVEDCRRVVAAADEAFGRLDALV-NAAGLTDRGTILDTSPELFDRHFAVNVRAPFF 121

Query: 128 LLQDAAPHLQKGS---SVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALA-AEMAPDTR 183
           L+Q+A   +++     ++V I S++ +  Q  +A Y  +K AL  LT+  A A +    R
Sbjct: 122 LMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCASKGALATLTRNAAYALLRNRIR 181

Query: 184 VNCVAPGFVPT 194
           VN +  G++ T
Sbjct: 182 VNGLNIGWMAT 192

Length = 260

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score =  115 bits (289), Expect = 3e-31
 Identities = 57/185 (30%), Positives = 100/185 (54%), Gaps = 2/185 (1%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
            +GKV +V+    G+G  +A R    GA VV+++R  + +DE   ++   G   + V   
Sbjct: 3   LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTD 62

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLL 129
           +++  Q  NL+   +E+FG++D +V+NA   PS+  +     +    + ++NV  ++ L 
Sbjct: 63  ITDEDQCANLVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLT 122

Query: 130 QDAAPHL-QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNCV 187
           Q   P L + G S+V+I+S+     Q     Y + K ALL  +++LA E+ P   RVN V
Sbjct: 123 QAFTPALAESGGSIVMINSMVLRHSQPKYGAYKMAKGALLAASQSLATELGPQGIRVNSV 182

Query: 188 APGFV 192
           APG++
Sbjct: 183 APGYI 187

Length = 258

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score =  114 bits (288), Expect = 3e-31
 Identities = 56/191 (29%), Positives = 93/191 (48%), Gaps = 9/191 (4%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
           R  GK AI+T +  GIG  IA      GASVVVS       +  V +++  G +     C
Sbjct: 8   RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRC 67

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAAN--PSVDSILQTKESVLDKLWDINVKSSI 126
            +++ Q+   L +  + K GK+D++V+NA        D  +        + +++NV S  
Sbjct: 68  DITSEQELSALADFALSKLGKVDILVNNAGGGGPKPFDMPMAD----FRRAYELNVFSFF 123

Query: 127 LLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTR 183
            L Q  AP ++K  G  ++ I+S+A      +M  Y  +K A   L + +A ++   + R
Sbjct: 124 HLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIR 183

Query: 184 VNCVAPGFVPT 194
           VN +APG + T
Sbjct: 184 VNGIAPGAILT 194

Length = 255

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score =  114 bits (287), Expect = 4e-31
 Identities = 61/193 (31%), Positives = 99/193 (51%), Gaps = 9/193 (4%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKL-KARGIEVIGVV 67
             +GKVAIVT  ++GIG  IA  L   GA V +        +E   +L K  G++     
Sbjct: 5   SLKGKVAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKYGVKTKAYK 64

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
           C VS+ +  +    Q  + FGKID++++NA       ++  T E   +K+ D+N+     
Sbjct: 65  CDVSSQESVEKTFKQIQKDFGKIDILIANAGITVHKPALDYTYEQW-NKVIDVNLNGVFN 123

Query: 128 LLQDAAPHLQKG--SSVVLISSIAGY---QPQSSMAMYGVTKTALLGLTKALAAEMAPD- 181
             Q AA   +K    S+++ +S++G    +PQ   A Y  +K A++ L K+LA E A   
Sbjct: 124 CAQAAAKIFKKQGKGSLIITASMSGTIVNRPQPQ-AAYNASKAAVIHLAKSLAVEWAKYF 182

Query: 182 TRVNCVAPGFVPT 194
            RVN ++PG++ T
Sbjct: 183 IRVNSISPGYIDT 195

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score =  113 bits (284), Expect = 6e-31
 Identities = 63/216 (29%), Positives = 101/216 (46%), Gaps = 12/216 (5%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           KVA+VT +++GIG  IA  L  +G  V +  R      E +  L A G +V  V     +
Sbjct: 1   KVALVTGASRGIGIEIARALARDGYRVSLGLRNP----EDLAALSASGGDVEAVPYDARD 56

Query: 73  GQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDA 132
            +  + L++   ++FG+IDV+V NA           +    L+  + INV +   L +  
Sbjct: 57  PEDARALVDALRDRFGRIDVLVHNAGIGRPTTLREGSDAE-LEAHFSINVIAPAELTRAL 115

Query: 133 APHLQKGSS--VVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RVNCVAP 189
            P L++  S  VV ++S++G +  +  A Y  +K AL  L  AL  E      RV+ V P
Sbjct: 116 LPALREAGSGRVVFLNSLSGKRVLAGNAGYSASKFALRALAHALRQEGWDHGVRVSAVCP 175

Query: 190 GFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV 225
           GFV T  A+ +T     V +    ++  P  +   V
Sbjct: 176 GFVDTPMAQGLTL----VGAFPPEEMIQPKDIANLV 207

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score =  112 bits (282), Expect = 2e-30
 Identities = 57/221 (25%), Positives = 97/221 (43%), Gaps = 10/221 (4%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           KVAI+T    GIG   A+ L  +GA V +  R +     A ++     ++   V C V++
Sbjct: 1   KVAIITGGASGIGLATAKLLLKKGAKVAILDRNENPGAAAELQAINPKVKATFVQCDVTS 60

Query: 73  GQQRKNLINQTIEKFGKIDVVVSNAA-ANPSVDSILQTKESVLDKLWDINVKSSILLLQD 131
            +Q      + IEKFG++D++++NA   +              +K  D+N+   I     
Sbjct: 61  WEQLAAAFKKAIEKFGRVDILINNAGILDEKSYLFAGKLPPPWEKTIDVNLTGVINTTYL 120

Query: 132 AAPHLQK-----GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT--RV 184
           A  ++ K     G  +V I S+AG  P     +Y  +K  ++G T++LA  +   T  RV
Sbjct: 121 ALHYMDKNKGGKGGVIVNIGSVAGLYPAPQFPVYSASKHGVVGFTRSLADLLEYKTGVRV 180

Query: 185 NCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV 225
           N + PGF  T     + +       + S     P  +  A+
Sbjct: 181 NAICPGFTNTPLLPDLVAK--EAEMLPSAPTQSPEVVAKAI 219

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score =  112 bits (281), Expect = 3e-30
 Identities = 62/207 (29%), Positives = 107/207 (51%), Gaps = 6/207 (2%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA--RGIEVIGV 66
           R  G+ A++T +++GIG  IA      GA V++ +R    + +A  +L       EV G+
Sbjct: 6   RLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGL 65

Query: 67  VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSI 126
              VS+ + R+ +++   + +  + ++V+NA  N    +I  T++     +++ N+ S+ 
Sbjct: 66  AADVSDDEDRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDE-WRGIFETNLFSAF 124

Query: 127 LLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TR 183
            L + A P L+    S++V I S++G     S A YG+TK ALL +T+ LA E A D  R
Sbjct: 125 ELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPYGMTKAALLQMTRNLAVEWAEDGIR 184

Query: 184 VNCVAPGFVPTHFAEYITSNDGVVSSV 210
           VN VAP ++ T       S+      V
Sbjct: 185 VNAVAPWYIRTPLTSGPLSDPDYYEQV 211

Length = 257

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score =  111 bits (279), Expect = 5e-30
 Identities = 59/184 (32%), Positives = 92/184 (50%), Gaps = 4/184 (2%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRK-QKNVDEAVVKLKARGIEVIGVVCHVS 71
            VA+VT + + IG  IAE L  EG  VVV   + +        +L A     + V   +S
Sbjct: 1   AVALVTGAAKRIGRAIAEALAAEGYRVVVHYNRSEAEAQRLKDELNALRNSAVLVQADLS 60

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQD 131
           +     +L+      FG+ DV+V+NA+A      + Q  E    +L+ IN+K+  LL+Q 
Sbjct: 61  DFAACADLVAAAFRAFGRCDVLVNNASAFY-PTPLGQGSEDAWAELFGINLKAPYLLIQA 119

Query: 132 AAPHLQKGS--SVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAP 189
            A  L      S++ I      +P +    Y ++K AL GLT++ A E+AP+ RVN +AP
Sbjct: 120 FARRLAGSRNGSIINIIDAMTDRPLTGYFAYCMSKAALEGLTRSAALELAPNIRVNGIAP 179

Query: 190 GFVP 193
           G + 
Sbjct: 180 GLIL 183

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score =  110 bits (277), Expect = 1e-29
 Identities = 69/192 (35%), Positives = 101/192 (52%), Gaps = 10/192 (5%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVV 67
             +G+VA++T    G+G  + ER   EGA V V  R      E V +L+A  G  V+GV 
Sbjct: 1   WLKGEVALITGGGSGLGRALVERFVAEGAKVAVLDRSA----EKVAELRADFGDAVVGVE 56

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAA---NPSVDSILQTK-ESVLDKLWDINVK 123
             V +    +  + + +E+FGK+D  + NA     + S+  I + K +   D+L+ INVK
Sbjct: 57  GDVRSLADNERAVARCVERFGKLDCFIGNAGIWDYSTSLVDIPEEKLDEAFDELFHINVK 116

Query: 124 SSILLLQDAAPHLQKGS-SVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT 182
             IL  + A P L     SV+   S AG+ P     +Y  +K A++GL K LA E+AP  
Sbjct: 117 GYILGAKAALPALYATEGSVIFTVSNAGFYPGGGGPLYTASKHAVVGLVKQLAYELAPHI 176

Query: 183 RVNCVAPGFVPT 194
           RVN VAPG + T
Sbjct: 177 RVNGVAPGGMVT 188

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score =  110 bits (277), Expect = 1e-29
 Identities = 67/205 (32%), Positives = 103/205 (50%), Gaps = 3/205 (1%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI-E 62
           M    R+  KV IVT  ++GIG GI       GA VV  +R +        +L   G   
Sbjct: 1   MASGLRYADKVVIVTGGSRGIGRGIVRAFVENGAKVVFCARGEAAGQALESELNRAGPGS 60

Query: 63  VIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINV 122
              V C V+  +  K LI+ T+E+FG+ID +V+NA  +P   +  +T       L ++N+
Sbjct: 61  CKFVPCDVTKEEDIKTLISVTVERFGRIDCLVNNAGWHPPHQTTDETSAQEFRDLLNLNL 120

Query: 123 KSSILLLQDAAPHLQKGS-SVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP- 180
            S  L  + A PHL+K   +++ +SS+ G   Q   A Y  TK A+  +TKALA + +  
Sbjct: 121 ISYFLASKYALPHLRKSQGNIINLSSLVGSIGQKQAAPYVATKGAITAMTKALAVDESRY 180

Query: 181 DTRVNCVAPGFVPTHFAEYITSNDG 205
             RVNC++PG + T   E + +   
Sbjct: 181 GVRVNCISPGNIWTPLWEELAAQTP 205

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score =  110 bits (277), Expect = 1e-29
 Identities = 60/188 (31%), Positives = 97/188 (51%), Gaps = 8/188 (4%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
           G+VA++T    GIG  + ER   EGA V V  R  + +     +       V+ V   V+
Sbjct: 6   GQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDH---VLVVEGDVT 62

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAA----ANPSVDSILQTKESVLDKLWDINVKSSIL 127
           +    +  ++QT++ FGK+D  V NA         VD   +T ++  D+++++NVK  +L
Sbjct: 63  SYADNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLL 122

Query: 128 LLQDAAPHLQK-GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNC 186
             + A P L+  G S++   S + + P     +Y  +K A++GL + LA E+AP  RVN 
Sbjct: 123 GAKAALPALKASGGSMIFTLSNSSFYPGGGGPLYTASKHAVVGLVRQLAYELAPKIRVNG 182

Query: 187 VAPGFVPT 194
           VAPG   T
Sbjct: 183 VAPGGTVT 190

Length = 263

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score =  109 bits (275), Expect = 2e-29
 Identities = 66/189 (34%), Positives = 100/189 (52%), Gaps = 9/189 (4%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
            KVA+VT + QGIGF IA+RL  +G  V +    ++    A  KL   G + I V   VS
Sbjct: 2   SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVS 61

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAAANPS--VDSILQTKESVLDKLWDINVKSSILLL 129
           +  Q    + Q ++ FG ++VVV+NA   P+  +++I    E   DK+++INV   I  +
Sbjct: 62  DRDQVFAAVRQVVDTFGDLNVVVNNAGVAPTTPIETI---TEEQFDKVYNINVGGVIWGI 118

Query: 130 QDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVN 185
           Q A    +K   G  ++  +S AG      +A+Y  TK A+ GLT+  A ++A +   VN
Sbjct: 119 QAAQEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAVRGLTQTAARDLASEGITVN 178

Query: 186 CVAPGFVPT 194
             APG V T
Sbjct: 179 AYAPGIVKT 187

Length = 256

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score =  109 bits (275), Expect = 2e-29
 Identities = 65/188 (34%), Positives = 99/188 (52%), Gaps = 6/188 (3%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK-LKARGIEVIGVVCHV 70
           GKVA+VT ++ GIG  IA RL   GA+VVV+ R +++  E VV+ +KA G + I V   V
Sbjct: 3   GKVALVTGASSGIGKAIAIRLATAGANVVVNYRSKEDAAEEVVEEIKAVGGKAIAVQADV 62

Query: 71  SNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQ 130
           S  +    L    I++FG +D++V+NA       S   T E   +K+ D+N+    L  +
Sbjct: 63  SKEEDVVALFQSAIKEFGTLDILVNNAGLQGDASSHEMTLED-WNKVIDVNLTGQFLCAR 121

Query: 131 DAAPHLQKGSS---VVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNC 186
           +A    +K      ++ +SS+    P      Y  +K  +  +TK LA E AP   RVN 
Sbjct: 122 EAIKRFRKSKIKGKIINMSSVHEKIPWPGHVNYAASKGGVKMMTKTLAQEYAPKGIRVNA 181

Query: 187 VAPGFVPT 194
           +APG + T
Sbjct: 182 IAPGAINT 189

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score =  109 bits (274), Expect = 3e-29
 Identities = 58/194 (29%), Positives = 96/194 (49%), Gaps = 16/194 (8%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVD------------EAVVKLKAR 59
           GKVA VT +++GIG  IA RL   GA+VVV+++     D            E   +++A 
Sbjct: 3   GKVAFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIEAA 62

Query: 60  GIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWD 119
           G + + +V  V +  Q + L+  T+++FG++D++V+NA A   +  +  T     D +  
Sbjct: 63  GGQALPIVVDVRDEDQVRALVEATVDQFGRLDILVNNAGAI-WLSLVEDTPAKRFDLMQR 121

Query: 120 INVKSSILLLQDAAPHLQKGSS--VVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAE 177
           +N++ + LL Q A PH+ K     ++ IS     +P      Y   K  +  LT  LAAE
Sbjct: 122 VNLRGTYLLSQAALPHMVKAGQGHILNISPPLSLRPARGDVAYAAGKAGMSRLTLGLAAE 181

Query: 178 MAP-DTRVNCVAPG 190
           +      VN + P 
Sbjct: 182 LRRHGIAVNSLWPS 195

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score =  108 bits (272), Expect = 4e-29
 Identities = 66/188 (35%), Positives = 100/188 (53%), Gaps = 6/188 (3%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
            +GKVAIVT +  GIG   A RL  EGA VVV+          V ++       + +   
Sbjct: 1   LEGKVAIVTGAGAGIGAACAARLAREGARVVVADIDGGAAQAVVAQI---AGGALALRVD 57

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLL 129
           V++ QQ   L  + +E+FG +D++V+NA A     +I+ T  +V D+   IN++ + L  
Sbjct: 58  VTDEQQVAALFERAVEEFGGLDLLVNNAGAMHLTPAIIDTDLAVWDQTMAINLRGTFLCC 117

Query: 130 QDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEM-APDTRVNC 186
           + AAP +  + G S+V +SSIAG         YG +K A+  LT+ LAAE+     R N 
Sbjct: 118 RHAAPRMIARGGGSIVNLSSIAGQSGDPGYGAYGASKAAIRNLTRTLAAELRHAGIRCNA 177

Query: 187 VAPGFVPT 194
           +APG + T
Sbjct: 178 LAPGLIDT 185

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score =  108 bits (272), Expect = 5e-29
 Identities = 63/184 (34%), Positives = 98/184 (53%), Gaps = 6/184 (3%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
           R +GKVAIVT +  G G GIA R   EGA VV++     N D A       G   I +  
Sbjct: 2   RLEGKVAIVTGAGSGFGEGIARRFAQEGARVVIADI---NADGAERVAADIGEAAIAIQA 58

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
            V+     + ++   + KFG++D++V+NA        +L+  E   D+++ +NVKS  L 
Sbjct: 59  DVTKRADVEAMVEAALSKFGRLDILVNNAGITHRNKPMLEVDEEEFDRVFAVNVKSIYLS 118

Query: 129 LQDAAPHLQKGSSVVLI--SSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RVN 185
            Q   PH+++    V+I  +S AG +P+  +  Y  +K  ++  TKA+A E+AP   RVN
Sbjct: 119 AQALVPHMEEQGGGVIINIASTAGLRPRPGLTWYNASKGWVVTATKAMAVELAPRNIRVN 178

Query: 186 CVAP 189
           C+ P
Sbjct: 179 CLCP 182

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score =  108 bits (273), Expect = 6e-29
 Identities = 59/187 (31%), Positives = 97/187 (51%), Gaps = 6/187 (3%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
           GKV I+T +++GIG  +A RL   GA +V+++R +  +     +L   G E + V   VS
Sbjct: 1   GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVS 60

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNA--AANPSVDSILQTKESVLDKLWDINVKSSILLL 129
           + +  + LI   + +FG ID++V+NA        D +     SV +++  +N   ++   
Sbjct: 61  DAEACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDL--SVFERVMRVNYLGAVYCT 118

Query: 130 QDAAPHLQKGS-SVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNCV 187
             A PHL+     +V++SS+AG     + + Y  +K AL G   +L  E+A D   V  V
Sbjct: 119 HAALPHLKASRGQIVVVSSLAGLTGVPTRSGYAASKHALHGFFDSLRIELADDGVAVTVV 178

Query: 188 APGFVPT 194
            PGFV T
Sbjct: 179 CPGFVAT 185

Length = 263

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score =  108 bits (271), Expect = 7e-29
 Identities = 58/187 (31%), Positives = 96/187 (51%), Gaps = 14/187 (7%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
            + KVAIVT  +QGIG  +  RL  EG++V+    K+ +    V   K            
Sbjct: 4   LKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPS-YNDVDYFK----------VD 52

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLL 129
           VSN +Q    I+  I K+G+ID++V+NA    S  +I   +E   D++ ++NV    L+ 
Sbjct: 53  VSNKEQVIKGIDYVISKYGRIDILVNNAGIE-SYGAIHAVEEDEWDRIINVNVNGIFLMS 111

Query: 130 QDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCV 187
           +   P++  Q    ++ I+S+  +    + A Y  +K A+LGLT+++A + AP  R   V
Sbjct: 112 KYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKHAVLGLTRSIAVDYAPTIRCVAV 171

Query: 188 APGFVPT 194
            PG + T
Sbjct: 172 CPGSIRT 178

Length = 258

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score =  107 bits (270), Expect = 1e-28
 Identities = 68/202 (33%), Positives = 106/202 (52%), Gaps = 11/202 (5%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHV 70
            GK+ +VT  ++GIG  IA+     GA V++S+RK +   +A  +L A G E I +   +
Sbjct: 5   AGKIVLVTGGSRGIGRMIAQGFLEAGARVIISARKAEACADAAEELSAYG-ECIAIPADL 63

Query: 71  SNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQ 130
           S+ +  + L+ +  E+  ++DV+V+NA A      +    ES  DK+ DINVKS   L Q
Sbjct: 64  SSEEGIEALVARVAERSDRLDVLVNNAGATWGA-PLEAFPESGWDKVMDINVKSVFFLTQ 122

Query: 131 DAAPHLQKGSS------VVLISSIAGYQ-PQSSMAMYGVTKTALLGLTKALAAEMAPD-T 182
              P L+  ++      V+ I SIAG          YG +K A+  LT+ LA E+A +  
Sbjct: 123 ALLPLLRAAATAENPARVINIGSIAGIVVSGLENYSYGASKAAVHQLTRKLAKELAGEHI 182

Query: 183 RVNCVAPGFVPTHFAEYITSND 204
            VN +APG  P+    ++  ND
Sbjct: 183 TVNAIAPGRFPSKMTAFL-LND 203

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional

 Score =  107 bits (270), Expect = 1e-28
 Identities = 56/183 (30%), Positives = 88/183 (48%), Gaps = 4/183 (2%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRK-QKNVDEAVVKLKA-RGIEVIGVVC 68
             KVA++T   + IG  IA  L   G  V +   +     D    +L A R      +  
Sbjct: 5   SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQA 64

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
            + +      L+   +  FG++D +V+NA++      +    E+  D L+  N+K+   L
Sbjct: 65  DLLDPDALPELVAACVAAFGRLDALVNNASSFYPTP-LGSITEAQWDDLFASNLKAPFFL 123

Query: 129 LQDAAPHLQKGS-SVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCV 187
            Q AAP L+K   ++V I+ I   +P     +Y   K AL  LT++LA E+AP+ RVN V
Sbjct: 124 SQAAAPQLRKQRGAIVNITDIHAERPLKGYPVYCAAKAALEMLTRSLALELAPEVRVNAV 183

Query: 188 APG 190
           APG
Sbjct: 184 APG 186

Length = 249

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score =  106 bits (267), Expect = 5e-28
 Identities = 56/186 (30%), Positives = 94/186 (50%), Gaps = 9/186 (4%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
               GKVAIVT     IG  +A  L   GA V +      N   AV    + G     + 
Sbjct: 2   IGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADN-GAAVA--ASLGERARFIA 58

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQ-TKESVLDKLWDINVKSSI 126
             +++    +  +   + +FG++D++V+ A     +D  L  ++   L  L D+N+ S+ 
Sbjct: 59  TDITDDAAIERAVATVVARFGRVDILVNLACT--YLDDGLASSRADWLAAL-DVNLVSAA 115

Query: 127 LLLQDAAPHLQK-GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRV 184
           +L Q A PHL + G ++V  +SI+    Q+   +Y  +K A+  LT+++A ++APD  RV
Sbjct: 116 MLAQAAHPHLARGGGAIVNFTSISAKFAQTGRWLYPASKAAIRQLTRSMAMDLAPDGIRV 175

Query: 185 NCVAPG 190
           N V+PG
Sbjct: 176 NSVSPG 181

Length = 261

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score =  106 bits (266), Expect = 5e-28
 Identities = 59/198 (29%), Positives = 92/198 (46%), Gaps = 6/198 (3%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA--RGIEV 63
           M  R  GKVA+VT + QGIG  IA     EGA+V ++       + A   +     G  V
Sbjct: 1   MMNRLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARV 60

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVK 123
           + V   V++       +    E FG +DV+V+NA  N   D  L   +    + + +++ 
Sbjct: 61  LAVPADVTDAASVAAAVAAAEEAFGPLDVLVNNAGINVFADP-LAMTDEDWRRCFAVDLD 119

Query: 124 SSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP- 180
            +    +   P +  +   S+V I+S   ++       Y V K  LLGLT+AL  E A  
Sbjct: 120 GAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGCFPYPVAKHGLLGLTRALGIEYAAR 179

Query: 181 DTRVNCVAPGFVPTHFAE 198
           + RVN +APG++ T   E
Sbjct: 180 NVRVNAIAPGYIETQLTE 197

Length = 260

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score =  105 bits (265), Expect = 6e-28
 Identities = 56/194 (28%), Positives = 97/194 (50%), Gaps = 9/194 (4%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV 63
           M   K   GKVA++T ++ GIG   A  L   GA VV+++R+++ ++    ++ A     
Sbjct: 1   MTTLK---GKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA--GAA 55

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVK 123
           + +   V++    +  I    E+FG+ID++V+NA      D + +      D++ D NVK
Sbjct: 56  LALALDVTDRAAVEAAIEALPEEFGRIDILVNNAGLAL-GDPLDEADLDDWDRMIDTNVK 114

Query: 124 SSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP- 180
             +   +   P +  +K   ++ + SIAG  P    A+YG TK A+   +  L  E+A  
Sbjct: 115 GLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKAAVRAFSLGLRQELAGT 174

Query: 181 DTRVNCVAPGFVPT 194
             RV  ++PG V T
Sbjct: 175 GIRVTVISPGLVET 188

Length = 246

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score =  105 bits (265), Expect = 6e-28
 Identities = 56/186 (30%), Positives = 91/186 (48%), Gaps = 4/186 (2%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
           GK A+VT +  GIG  IA  L   GA+VVV+   ++  + A       G  VI +   V+
Sbjct: 1   GKTALVTGAASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKVAGDAGGSVIYLPADVT 60

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQD 131
              +  ++I     +FG +D++V+NA     V  I +      D++  + + S+   ++ 
Sbjct: 61  KEDEIADMIAAAAAEFGGLDILVNNAGIQ-HVAPIEEFPPEDWDRIIAVMLTSAFHTIRA 119

Query: 132 AAPHLQKGS--SVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVA 188
           A PH++K     ++ I+S  G       + Y   K  L+GLTK LA E+A     VN + 
Sbjct: 120 ALPHMKKQGWGRIINIASAHGLVASPFKSAYVAAKHGLIGLTKVLALEVAEHGITVNAIC 179

Query: 189 PGFVPT 194
           PG+V T
Sbjct: 180 PGYVRT 185

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score =  105 bits (265), Expect = 7e-28
 Identities = 62/204 (30%), Positives = 99/204 (48%), Gaps = 16/204 (7%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
            R QGKVA++T +  GIG  +AER   EGA VV++         A +     G   I V 
Sbjct: 2   MRLQGKVALLTGAASGIGEAVAERYLAEGARVVIADI---KPARARLAALEIGPAAIAVS 58

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
             V+       ++   +E+FG ID++ +NAA    +  IL       D+L+ +NVK    
Sbjct: 59  LDVTRQDSIDRIVAAAVERFGGIDILFNNAALF-DMAPILDISRDSYDRLFAVNVKGLFF 117

Query: 128 LLQDAAPHL---QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTR 183
           L+Q  A H+    +G  ++ ++S AG + ++ ++ Y  TK A++  T++ A  +      
Sbjct: 118 LMQAVARHMVEQGRGGKIINMASQAGRRGEALVSHYCATKAAVISYTQSAALALIRHGIN 177

Query: 184 VNCVAPGFVPT--------HFAEY 199
           VN +APG V T         FA Y
Sbjct: 178 VNAIAPGVVDTPMWDQVDALFARY 201

Length = 257

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score =  105 bits (263), Expect = 8e-28
 Identities = 56/192 (29%), Positives = 91/192 (47%), Gaps = 8/192 (4%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
           KVA+VT + +GIGF I  +L   G  +V++++R  +    AV KL+A G+ V      V+
Sbjct: 1   KVALVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRAEGLSVRFHQLDVT 60

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQD 131
           +    +   +   EK+G +D++V+NA                  +    N   ++ + Q 
Sbjct: 61  DDASIEAAADFVEEKYGGLDILVNNAGIAFKGFDDSTPTREQARETMKTNFFGTVDVTQA 120

Query: 132 AAPHLQKGSS--VVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMA-PDTRVNCVA 188
             P L+K  +  +V +SS  G    S  + YGV+K AL  LT+ LA E+     +VN   
Sbjct: 121 LLPLLKKSPAGRIVNVSSGLG----SLTSAYGVSKAALNALTRILAKELKETGIKVNACC 176

Query: 189 PGFVPTHFAEYI 200
           PG+V T      
Sbjct: 177 PGWVKTDMGGGK 188

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score =  105 bits (263), Expect = 9e-28
 Identities = 59/188 (31%), Positives = 102/188 (54%), Gaps = 14/188 (7%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHV 70
            GKVA++TA+ QGIG  IA     EGA+V+ +     +++E  +K   RG  +   V  V
Sbjct: 1   DGKVALITAAAQGIGRAIALAFAREGANVIAT-----DINEEKLKELERGPGITTRVLDV 55

Query: 71  SNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQ 130
           ++ +Q    +    ++ G+IDV+ + A       SIL  ++   D   ++NV+S  L+++
Sbjct: 56  TDKEQ----VAALAKEEGRIDVLFNCAGFVH-HGSILDCEDDDWDFAMNLNVRSMYLMIK 110

Query: 131 DAAPHL--QKGSSVVLISSIAG-YQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNC 186
              P +  +K  S++ +SS+A   +   +  +Y  TK A++GLTK++AA+ A    R N 
Sbjct: 111 AVLPKMLARKDGSIINMSSVASSIKGVPNRFVYSTTKAAVIGLTKSVAADFAQQGIRCNA 170

Query: 187 VAPGFVPT 194
           + PG V T
Sbjct: 171 ICPGTVDT 178

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score =  104 bits (262), Expect = 1e-27
 Identities = 50/192 (26%), Positives = 87/192 (45%), Gaps = 6/192 (3%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
           M    QGKV  +T    G+G   A  L   GA V +  R    + + +  + A  + + G
Sbjct: 1   MEHSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGG 60

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSS 125
           +   + + Q  +  +++   +FG++D +V+ A A     +I        D+++ +NVK++
Sbjct: 61  I--DLVDPQAARRAVDEVNRQFGRLDALVNIAGAFVW-GTIADGDADTWDRMYGVNVKTT 117

Query: 126 ILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DT 182
           +   + A P L    G  +V I + A  +    M  Y   K  +  LT+ALAAE+     
Sbjct: 118 LNASKAALPALTASGGGRIVNIGAGAALKAGPGMGAYAAAKAGVARLTEALAAELLDRGI 177

Query: 183 RVNCVAPGFVPT 194
            VN V P  + T
Sbjct: 178 TVNAVLPSIIDT 189

Length = 239

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score =  104 bits (262), Expect = 1e-27
 Identities = 64/185 (34%), Positives = 103/185 (55%), Gaps = 5/185 (2%)

Query: 14  VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNG 73
           VAIVT    GIG  IA  L   GASVV++  K +  +     ++  G + IG+ C+V++ 
Sbjct: 1   VAIVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQAGGQAIGLECNVTSE 60

Query: 74  QQRKNLINQTIEKFGKIDVVVSNAA-ANPSVDSILQTKESVLDKLWDINVKSSILLLQDA 132
           Q  + ++  T+ +FG I ++V+NA    P    +  T+E   +  + +N+ S+  L Q  
Sbjct: 61  QDLEAVVKATVSQFGGITILVNNAGGGGPKPFDMPMTEED-FEWAFKLNLFSAFRLSQLC 119

Query: 133 APHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNCVAP 189
           APH+QK  G +++ ISS++       +A YG +K A+  +T+ LA ++ P   RVN VAP
Sbjct: 120 APHMQKAGGGAILNISSMSSENKNVRIAAYGSSKAAVNHMTRNLAFDLGPKGIRVNAVAP 179

Query: 190 GFVPT 194
           G V T
Sbjct: 180 GAVKT 184

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score =  104 bits (262), Expect = 2e-27
 Identities = 69/214 (32%), Positives = 104/214 (48%), Gaps = 8/214 (3%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
           RF  KVAIVT +  GIG   AE L  EGASVVV+    +  +    ++ A G   I V  
Sbjct: 3   RFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQV 62

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAA--ANPSVDSILQTKESVLDKLWDINVKSSI 126
            VS+    K + + T+  FG ID +V+NAA      +D ++        K   +N+  ++
Sbjct: 63  DVSDPDSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGAL 122

Query: 127 LLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMA-PDTR 183
           +  +    H+ K  G ++V  SS A +   +    YG+ K  L GLT+ LA E+   + R
Sbjct: 123 VCTRAVYKHMAKRGGGAIVNQSSTAAWLYSN---FYGLAKVGLNGLTQQLARELGGMNIR 179

Query: 184 VNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSP 217
           VN +APG + T     +T  + V   V  + LS 
Sbjct: 180 VNAIAPGPIDTEATRTVTPKEFVADMVKGIPLSR 213

Length = 250

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  104 bits (261), Expect = 2e-27
 Identities = 52/195 (26%), Positives = 97/195 (49%), Gaps = 7/195 (3%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           KV ++T  + GIG  +A  L  +G  V+ ++R    ++     L      +  +   V++
Sbjct: 1   KVVLITGCSSGIGLALALALAAQGYRVIATARNPDKLESLGELLNDN---LEVLELDVTD 57

Query: 73  GQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDA 132
            +  K  + + IE+FG+IDV+V+NA        + +T    + +L+++NV   + + +  
Sbjct: 58  EESIKAAVKEVIERFGRIDVLVNNAGYG-LFGPLEETSIEEVRELFEVNVFGPLRVTRAF 116

Query: 133 APHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAP 189
            P +  Q    +V +SS+AG  P   +  Y  +K AL  L+++L  E+AP   +V  + P
Sbjct: 117 LPLMRKQGSGRIVNVSSVAGLVPTPFLGPYCASKAALEALSESLRLELAPFGIKVTIIEP 176

Query: 190 GFVPTHFAEYITSND 204
           G V T FA+    + 
Sbjct: 177 GPVRTGFADNAAGSA 191

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score =  104 bits (260), Expect = 4e-27
 Identities = 63/196 (32%), Positives = 99/196 (50%), Gaps = 6/196 (3%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
           +  GK A++T + QGIG GIA      GA++++     + +++   +L  RG     VV 
Sbjct: 3   KLTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGRGHRCTAVVA 61

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
            V +       I +  EK G+ID++V+NA     + S L   +   D   DIN+K    +
Sbjct: 62  DVRDPASVAAAIKRAKEKEGRIDILVNNAGV-CRLGSFLDMSDEDRDFHIDINIKGVWNV 120

Query: 129 LQDAAPHL--QKGSSVVLISSIAG-YQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRV 184
            +   P +  +K   +V++SS+ G          Y +TK A++GLTK+LA E A    RV
Sbjct: 121 TKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIRV 180

Query: 185 NCVAPGFVPTHFAEYI 200
           N + PG+V T  AE I
Sbjct: 181 NAICPGYVRTPMAESI 196

Length = 263

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score =  103 bits (259), Expect = 5e-27
 Identities = 50/187 (26%), Positives = 92/187 (49%), Gaps = 10/187 (5%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIE----VIGVV 67
           GK  ++T  + GIG  +A+ L  EGA+V++ +R +  ++EAV +++A        V  + 
Sbjct: 1   GKHVLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASGQKVSYIS 60

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNA-AANPSVDSILQTKESVLDKLWDINVKSSI 126
             +S+ ++ +    Q +EK G  D+VV+ A  + P +           ++  D+N   S+
Sbjct: 61  ADLSDYEEVEQAFAQAVEKGGPPDLVVNCAGISIPGL--FEDLTAEEFERGMDVNYFGSL 118

Query: 127 LLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTR 183
            +     P +  Q+   +V +SS A        + Y  +K AL GL ++L  E+ P + R
Sbjct: 119 NVAHAVLPLMKEQRPGHIVFVSSQAALVGIYGYSAYCPSKFALRGLAESLRQELKPYNIR 178

Query: 184 VNCVAPG 190
           V+ V P 
Sbjct: 179 VSVVYPP 185

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score =  103 bits (259), Expect = 5e-27
 Identities = 63/190 (33%), Positives = 93/190 (48%), Gaps = 9/190 (4%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
            R QGK A++T  T GIG   A +   EGA V ++ R   +++ A  +L   G   + + 
Sbjct: 2   SRLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL---GESALVIR 58

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
               +   +K L     E FG++D V  NA        +    E++ D+ ++ NVK    
Sbjct: 59  ADAGDVAAQKALAQALAEAFGRLDAVFINAGVA-KFAPLEDWDEAMFDRSFNTNVKGPYF 117

Query: 128 LLQDAAPHLQKGSSVVLISSIAGY--QPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRV 184
           L+Q   P L   +S+VL  SI  +   P SS  +Y  +K ALL L K L+ E+ P   RV
Sbjct: 118 LIQALLPLLANPASIVLNGSINAHIGMPNSS--VYAASKAALLSLAKTLSGELLPRGIRV 175

Query: 185 NCVAPGFVPT 194
           N V+PG V T
Sbjct: 176 NAVSPGPVQT 185

Length = 249

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score =  103 bits (260), Expect = 9e-27
 Identities = 60/196 (30%), Positives = 100/196 (51%), Gaps = 10/196 (5%)

Query: 5   KMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVI 64
           K + + +GKVA++T    GIG  +A     EGA + +    +   D    K   + +E  
Sbjct: 39  KGSGKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHE-DANETK---QRVEKE 94

Query: 65  GVVC-----HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWD 119
           GV C      VS+    K+ + +T+ + G++D++V+NAA      S+       LDK + 
Sbjct: 95  GVKCLLIPGDVSDEAFCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFK 154

Query: 120 INVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMA 179
            N+ S   + + A PHL++GS+++   SI GY+   ++  Y  TK A+   T++LA  + 
Sbjct: 155 TNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNETLIDYSATKGAIHAFTRSLAQSLV 214

Query: 180 PD-TRVNCVAPGFVPT 194
               RVN VAPG + T
Sbjct: 215 QKGIRVNAVAPGPIWT 230

Length = 290

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score =  102 bits (255), Expect = 1e-26
 Identities = 61/186 (32%), Positives = 95/186 (51%), Gaps = 3/186 (1%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGVVCH 69
             KVAIVT +++GIG  IA RL  +G +V V+ +      DE V +++A G   I V   
Sbjct: 4   SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQAD 63

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLL 129
           V++      L +     FG+IDV+V+NA   P + +I        D+    N++ + ++L
Sbjct: 64  VADAAAVTRLFDAAETAFGRIDVLVNNAGVMP-LGTIADFDLEDFDRTIATNLRGAFVVL 122

Query: 130 QDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVA 188
           ++AA HL +G  ++ +S+     P      Y  +K A+ GL   LA E+      VN VA
Sbjct: 123 REAARHLGQGGRIINLSTSVIALPLPGYGPYAASKAAVEGLVHVLANELRGRGITVNAVA 182

Query: 189 PGFVPT 194
           PG V T
Sbjct: 183 PGPVAT 188

Length = 245

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score =  101 bits (254), Expect = 2e-26
 Identities = 61/186 (32%), Positives = 95/186 (51%), Gaps = 9/186 (4%)

Query: 15  AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEA---VVKLKARGIEVIGVVCHVS 71
           A+VT  ++GIG  IA RL   GA VV++ RK  + D A     +++  G + + V   VS
Sbjct: 1   ALVTGGSRGIGKAIALRLAERGADVVINYRK--SKDAAAEVAAEIEELGGKAVVVRADVS 58

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQD 131
             Q  + +     E+FG++DV+VSNAAA      + +   +  D   + N+K+ +   Q 
Sbjct: 59  QPQDVEEMFAAVKERFGRLDVLVSNAAAGAFRP-LSELTPAHWDAKMNTNLKALVHCAQQ 117

Query: 132 AAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNCVA 188
           AA  +  + G  +V ISS+   +   +    G  K AL  L + LA E+ P   RVN V+
Sbjct: 118 AAKLMRERGGGRIVAISSLGSIRALPNYLAVGTAKAALEALVRYLAVELGPRGIRVNAVS 177

Query: 189 PGFVPT 194
           PG + T
Sbjct: 178 PGVIDT 183

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|132368 TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

 Score =  102 bits (255), Expect = 2e-26
 Identities = 64/187 (34%), Positives = 92/187 (49%), Gaps = 8/187 (4%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
           R +G+V +VT    G+G  I +R   EGA V V  +    + E      A G  V+GV  
Sbjct: 2   RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELE---AAHGDAVVGVEG 58

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAA----ANPSVDSILQTKESVLDKLWDINVKS 124
            V +    K  + + +  FGKID ++ NA     +   VD      +   D+++ INVK 
Sbjct: 59  DVRSLDDHKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKG 118

Query: 125 SILLLQDAAPHL-QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTR 183
            +L ++ A P L     SV+   S AG+ P     +Y   K A++GL K LA E+AP  R
Sbjct: 119 YLLAVKAALPALVASRGSVIFTISNAGFYPNGGGPLYTAAKHAVVGLVKELAFELAPYVR 178

Query: 184 VNCVAPG 190
           VN VAPG
Sbjct: 179 VNGVAPG 185

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. Length = 262

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score =  100 bits (251), Expect = 3e-26
 Identities = 56/190 (29%), Positives = 90/190 (47%), Gaps = 11/190 (5%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           K A+VT +++GIG   A  L  EG  V + +R +  +  A  +       V+G+   V +
Sbjct: 1   KAALVTGASRGIGEATARLLHAEGYRVGICARDEARLAAAAAQELEG---VLGLAGDVRD 57

Query: 73  GQQRKNLINQTIEKFGKIDVVVSNA--AANPSVDSILQTKESVLDKLWDINVKSSILLLQ 130
               +  ++   E FG +D +V+NA       V+  L  +E  L    D N+  +   + 
Sbjct: 58  EADVRRAVDAMEEAFGGLDALVNNAGVGVMKPVEE-LTPEEWRLV--LDTNLTGAFYCIH 114

Query: 131 DAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCV 187
            AAP L +  G ++V + S+AG       A Y  +K  LLGL++A   ++   + RV  V
Sbjct: 115 KAAPALLRRGGGTIVNVGSLAGKNAFKGGAAYNASKFGLLGLSEAAMLDLREANIRVVNV 174

Query: 188 APGFVPTHFA 197
            PG V T FA
Sbjct: 175 MPGSVDTGFA 184

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score =  100 bits (251), Expect = 7e-26
 Identities = 60/193 (31%), Positives = 92/193 (47%), Gaps = 5/193 (2%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
           M     GK A+VT +  GIG  IA  L   GA+V ++   Q   +    ++   G + IG
Sbjct: 1   MMSNLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIG 60

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSS 125
           V   V+N       I++  E+FG +D++VSNA     V+ I     +   K+  I+V  +
Sbjct: 61  VAMDVTNEDAVNAGIDKVAERFGSVDILVSNAGIQ-IVNPIENYSFADWKKMQAIHVDGA 119

Query: 126 ILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-D 181
            L  + A  H+ K   G  V+ + S+  ++     + Y   K  LLGL + LA E A  +
Sbjct: 120 FLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGAKHN 179

Query: 182 TRVNCVAPGFVPT 194
            R + V PGFV T
Sbjct: 180 VRSHVVCPGFVRT 192

Length = 262

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score =   99 bits (249), Expect = 9e-26
 Identities = 57/185 (30%), Positives = 90/185 (48%), Gaps = 7/185 (3%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
           GKVAIVT    GIG  I       G  VV +   ++         +A G  +  V   V+
Sbjct: 1   GKVAIVTGGGHGIGKQICLDFLEAGDKVVFADIDEE---RGADFAEAEGPNLFFVHGDVA 57

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAA-ANPSVDSILQTKESVLDKLWDINVKSSILLLQ 130
           +    K ++   +EK G+IDV+V+NAA  +  + S L  +E   D++  +N+     L +
Sbjct: 58  DETLVKFVVYAMLEKLGRIDVLVNNAARGSKGILSSLLLEE--WDRILSVNLTGPYELSR 115

Query: 131 DAAPHLQKGSSVVL-ISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAP 189
                L K    ++ I+S   +Q +     Y  +K  L+ LT ALA  + PD RVNC++P
Sbjct: 116 YCRDELIKNKGRIINIASTRAFQSEPDSEAYAASKGGLVALTHALAMSLGPDIRVNCISP 175

Query: 190 GFVPT 194
           G++ T
Sbjct: 176 GWINT 180

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score = 99.7 bits (249), Expect = 2e-25
 Identities = 59/201 (29%), Positives = 97/201 (48%), Gaps = 8/201 (3%)

Query: 11  QGKVAIVTAST-QGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIE--VIGVV 67
            GKV +VTA+   GIG   A R   EGA VV+S   ++ + E   +L A      V  VV
Sbjct: 16  AGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVV 75

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
           C V++  Q   LI+  +E+ G++DV+V+NA        +  T +    ++ D+ +  +  
Sbjct: 76  CDVTSEAQVDALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDE-WSRVLDVTLTGTFR 134

Query: 128 LLQDAAPHLQ---KGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTR 183
             + A  +++    G  +V  +S+ G++ Q   A Y   K  ++ LT+  A E A    R
Sbjct: 135 ATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHYAAAKAGVMALTRCSALEAAEYGVR 194

Query: 184 VNCVAPGFVPTHFAEYITSND 204
           +N VAP      F   +TS +
Sbjct: 195 INAVAPSIAMHPFLAKVTSAE 215

Length = 262

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score = 99.5 bits (248), Expect = 2e-25
 Identities = 60/193 (31%), Positives = 99/193 (51%), Gaps = 6/193 (3%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHV 70
             +VA+VT +T GIG  IA RLG EG  V V +R ++ +   V +L+  G+E  G  C V
Sbjct: 2   DSEVALVTGATSGIGLAIARRLGKEGLRVFVCARGEEGLATTVKELREAGVEADGRTCDV 61

Query: 71  SNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQ 130
            +  + + L+   + ++G IDV+V+N A      +  +  + +   + + N+     + +
Sbjct: 62  RSVPEIEALVAAAVARYGPIDVLVNN-AGRSGGGATAELADELWLDVVETNLTGVFRVTK 120

Query: 131 D---AAPHLQKGSS-VVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVN 185
           +   A   L++G+  ++ I+S  G Q     A Y  +K  ++G TKAL  E+A     VN
Sbjct: 121 EVLKAGGMLERGTGRIINIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVN 180

Query: 186 CVAPGFVPTHFAE 198
            V PGFV T  A 
Sbjct: 181 AVCPGFVETPMAA 193

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|222222 pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase

 Score = 98.8 bits (247), Expect = 2e-25
 Identities = 57/194 (29%), Positives = 84/194 (43%), Gaps = 7/194 (3%)

Query: 19  ASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCHVSNGQQRK 77
           A    I + IA+    EGA VV+++        AV +L      +VI     V++ +   
Sbjct: 3   ADDNSIAWAIAKAAAEEGAEVVLTTWPPALRMGAVDELAKELPADVI--PLDVTSDEDID 60

Query: 78  NLINQTIEKFGKIDVVVSNAAANPSVD---SILQTKESVLDKLWDINVKSSILLLQDAAP 134
            L  +  E  GKID +V + A +P +      L T      K  DI+  S I L + A P
Sbjct: 61  ELFEKVKEDGGKIDFLVHSIAMSPEIRKGKPYLDTSREGFLKALDISAYSFISLAKAAKP 120

Query: 135 HLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNCVAPGFVP 193
            + +G S+V +S IA  +        GV K AL  L + LA E+     RVN ++ G   
Sbjct: 121 LMNEGGSIVALSYIAAERVFPGYGGMGVAKAALESLARYLAYELGRKGIRVNTISAGPTK 180

Query: 194 THFAEYITSNDGVV 207
           T     I   D +V
Sbjct: 181 TTAGSGIGGFDKMV 194

Length = 239

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score = 99.3 bits (248), Expect = 2e-25
 Identities = 64/195 (32%), Positives = 93/195 (47%), Gaps = 19/195 (9%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGV 66
              GKVA+VT    GIG  IAE    +GA V +  R      E V ++ A+  G    G+
Sbjct: 12  DLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDR-----SEDVAEVAAQLLGGNAKGL 66

Query: 67  VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWD----INV 122
           VC VS+ Q  +  +   I  FG+ID++V++A         L   E V ++ WD    IN+
Sbjct: 67  VCDVSDSQSVEAAVAAVISAFGRIDILVNSAGVAL-----LAPAEDVSEEDWDKTIDINL 121

Query: 123 KSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP 180
           K S L+ Q    H+    G  +V ++S AG         Y  +K  ++G+TK LA E  P
Sbjct: 122 KGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERHVAYCASKAGVVGMTKVLALEWGP 181

Query: 181 -DTRVNCVAPGFVPT 194
               VN ++P  V T
Sbjct: 182 YGITVNAISPTVVLT 196

Length = 255

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score = 99.0 bits (247), Expect = 3e-25
 Identities = 58/196 (29%), Positives = 103/196 (52%), Gaps = 6/196 (3%)

Query: 4   MKMAKRF--QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI 61
           M + +RF   G+VA+VT S +G+GF IA  L   GA V+V+ R    ++ AV  L+A G 
Sbjct: 1   MSILQRFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGG 60

Query: 62  EVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDIN 121
               +   +++ +       +   + G++D++V+N  A      + +  ++ +  L + +
Sbjct: 61  AAEALAFDIADEEAVAAAFARIDAEHGRLDILVNNVGARDR-RPLAELDDAAIRALLETD 119

Query: 122 VKSSILLLQDAAPHLQKGSS--VVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMA 179
           + + ILL + AA  +++     ++ I+SIAG   ++  A+Y   K  L GL +ALAAE  
Sbjct: 120 LVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGDAVYPAAKQGLTGLMRALAAEFG 179

Query: 180 P-DTRVNCVAPGFVPT 194
           P     N +APG+  T
Sbjct: 180 PHGITSNAIAPGYFAT 195

Length = 256

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 99.1 bits (247), Expect = 3e-25
 Identities = 64/193 (33%), Positives = 98/193 (50%), Gaps = 10/193 (5%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
            + RF+GKVA++T  T+GIG  IAE    EGA V V        +    +L+ +G+  I 
Sbjct: 1   YSMRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSA---ENEAKELREKGVFTIK 57

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSS 125
             C V N  Q K       ++FG++DV+V+NA     +    +  E   +K+  IN+  +
Sbjct: 58  --CDVGNRDQVKKSKEVVEKEFGRVDVLVNNAGIMYLM-PFEEFDEEKYNKMIKINLNGA 114

Query: 126 ILLLQDAAPHLQ--KGSSVVLISSIAGYQPQS-SMAMYGVTKTALLGLTKALAAEMAP-D 181
           I    +  P L+  K  ++V I+S AG    +     Y +TK  ++ LT+ LA E+    
Sbjct: 115 IYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAEGTTFYAITKAGIIILTRRLAFELGKYG 174

Query: 182 TRVNCVAPGFVPT 194
            RVN VAPG+V T
Sbjct: 175 IRVNAVAPGWVET 187

Length = 255

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score = 98.5 bits (246), Expect = 5e-25
 Identities = 49/192 (25%), Positives = 101/192 (52%), Gaps = 5/192 (2%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCH 69
           +GK A++T ++ GIG  +A++L   G ++++ +R++  ++    +L+ + G+EV  +   
Sbjct: 5   KGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPAD 64

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLL 129
           +S+ +  + L ++  E+ G IDV+V+NA    +    L+      +++  +N+ +   L 
Sbjct: 65  LSDPEALERLEDELKERGGPIDVLVNNAGFG-TFGPFLELSLDEEEEMIQLNILALTRLT 123

Query: 130 QDAAPHLQKGSS--VVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNC 186
           +   P + +  +  ++ I S AG  P   MA+Y  TK  +L  ++AL  E+     +V  
Sbjct: 124 KAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATKAFVLSFSEALREELKGTGVKVTA 183

Query: 187 VAPGFVPTHFAE 198
           V PG   T F +
Sbjct: 184 VCPGPTRTEFFD 195

Length = 265

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score = 98.3 bits (245), Expect = 7e-25
 Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 22/204 (10%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
            + KVA++T  T  +G  +A  L   GA V    R Q+  D+   ++ A G   I +   
Sbjct: 3   LKNKVAVITGGTGVLGGAMARALAQAGAKVAALGRNQEKGDKVAKEITALGGRAIAL--- 59

Query: 70  VSNGQQRKNLI---NQTIEKFGKIDVVVSNAAAN---PSVDSILQTKESVLD-------- 115
            ++   R +L     + + +FG +D++++ A  N    + D      E+  +        
Sbjct: 60  AADVLDRASLERAREEIVAQFGTVDILINGAGGNHPDATTDPEHYEPETEQNFFDLDEEG 119

Query: 116 --KLWDINVKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLT 171
              ++D+N+  S L  Q     +  QKG S++ ISS+  + P + +  Y   K A+   T
Sbjct: 120 WEFVFDLNLNGSFLPSQVFGKDMLEQKGGSIINISSMNAFSPLTKVPAYSAAKAAVSNFT 179

Query: 172 KALAAEMA-PDTRVNCVAPGFVPT 194
           + LA E A    RVN +APGF  T
Sbjct: 180 QWLAVEFATTGVRVNAIAPGFFVT 203

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score = 98.1 bits (245), Expect = 7e-25
 Identities = 63/196 (32%), Positives = 97/196 (49%), Gaps = 16/196 (8%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
           R  GKVAI+T ++ GIG   A+    EGA VVV +R+Q  +D+ V +++A G E + +  
Sbjct: 3   RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAG 62

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAAN----PSVDSILQTKESVLDKLWDINVKS 124
            V +    K L+   +E+FG +D+  +NA       P  +  L+     L      N+ S
Sbjct: 63  DVRDEAYAKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETL----ATNLTS 118

Query: 125 SILLLQDAAPHLQK--GSSVVLISSIAGYQ---PQSSMAMYGVTKTALLGLTKALAAEMA 179
           + L  +   P +    G S++  S+  G+    P   MA Y  +K  L+GLT+ LAAE  
Sbjct: 119 AFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPG--MAAYAASKAGLIGLTQVLAAEYG 176

Query: 180 PD-TRVNCVAPGFVPT 194
               RVN + PG   T
Sbjct: 177 AQGIRVNALLPGGTDT 192

Length = 254

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score = 97.4 bits (242), Expect = 1e-24
 Identities = 59/199 (29%), Positives = 92/199 (46%), Gaps = 5/199 (2%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK-LKARGIEVIGVV 67
           +  GKVAIVT   +GIG  I   L  EGA VV++    K   E +V  L   G +V  V 
Sbjct: 3   QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQ 62

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
             VS  +    L+ + +  FGK+D++V+NA       +  +      +++ D+N+ S   
Sbjct: 63  ADVSKVEDANRLVEEAVNHFGKVDILVNNAGITRD-RTFKKLNREDWERVIDVNLSSVFN 121

Query: 128 LLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRV 184
                 P++   +   ++ ISSI G         Y   K  +LG TK+LA E+A  +  V
Sbjct: 122 TTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAAKAGMLGFTKSLALELAKTNVTV 181

Query: 185 NCVAPGFVPTHFAEYITSN 203
           N + PGF+ T     +   
Sbjct: 182 NAICPGFIDTEMVAEVPEE 200

Length = 247

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score = 96.6 bits (241), Expect = 3e-24
 Identities = 61/191 (31%), Positives = 92/191 (48%), Gaps = 20/191 (10%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHV 70
           QGK+ IVT  + GIG  I + L   GA+VV       N D      +    +   V   V
Sbjct: 8   QGKIIIVTGGSSGIGLAIVKELLANGANVV-------NADIHGGDGQHENYQF--VPTDV 58

Query: 71  SNGQQRKNLINQTIEKFGKIDVVVSNAAAN-PSV-------DSILQTKESVLDKLWDINV 122
           S+ ++  + + + IEKFG+ID +V+NA  N P +           +  E+  DK+++IN 
Sbjct: 59  SSAEEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQ 118

Query: 123 KSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP 180
           K   L+ Q  A  +  Q    +V +SS AG +     + Y  TK AL   T++ A E+  
Sbjct: 119 KGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEGQSCYAATKAALNSFTRSWAKELGK 178

Query: 181 -DTRVNCVAPG 190
            + RV  VAPG
Sbjct: 179 HNIRVVGVAPG 189

Length = 266

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score = 96.3 bits (240), Expect = 3e-24
 Identities = 59/182 (32%), Positives = 88/182 (48%), Gaps = 6/182 (3%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
           GKVA+VT    GIG  IA+RL  EGA+VVV+    +  ++     +      +GV C V+
Sbjct: 1   GKVALVTGGASGIGLAIAKRLAAEGAAVVVADIDPEIAEKVAEAAQGGP-RALGVQCDVT 59

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQD 131
           +  Q ++   Q + +FG +D+VVSNA    S   I +T     ++  DIN+    L+ ++
Sbjct: 60  SEAQVQSAFEQAVLEFGGLDIVVSNAGIATS-SPIAETSLEDWNRSMDINLTGHFLVSRE 118

Query: 132 AAP---HLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNCV 187
           A         G ++V  +S     P  + A Y   K A   L + LA E   D  RVN V
Sbjct: 119 AFRIMKSQGIGGNIVFNASKNAVAPGPNAAAYSAAKAAEAHLARCLALEGGEDGIRVNTV 178

Query: 188 AP 189
            P
Sbjct: 179 NP 180

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score = 96.6 bits (241), Expect = 3e-24
 Identities = 62/191 (32%), Positives = 92/191 (48%), Gaps = 5/191 (2%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
           M    + KV IVT    GIG  I+ RL  EGA  V+  R   + DE   +L+A       
Sbjct: 1   MDLNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPD-DEFAEELRALQPRAEF 59

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSS 125
           V   +++  Q ++ + QT+ KFG+ID +V+NA  N  V  +   +E+ +  L + N+   
Sbjct: 60  VQVDLTDDAQCRDAVEQTVAKFGRIDGLVNNAGVNDGVG-LEAGREAFVASL-ERNLIHY 117

Query: 126 ILLLQDAAPHLQKG-SSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TR 183
            ++     PHL+    ++V ISS      Q   + Y   K A L LT+  A  +A D  R
Sbjct: 118 YVMAHYCLPHLKASRGAIVNISSKTALTGQGGTSGYAAAKGAQLALTREWAVALAKDGVR 177

Query: 184 VNCVAPGFVPT 194
           VN V P  V T
Sbjct: 178 VNAVIPAEVMT 188

Length = 258

>gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional

 Score = 96.9 bits (241), Expect = 4e-24
 Identities = 57/189 (30%), Positives = 98/189 (51%), Gaps = 3/189 (1%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVS--SRKQKNVDEAVVKLKARGIEVIGV 66
           R QG+ A++T +  GIG   A     EGA + ++    ++++  E V  ++A G + + +
Sbjct: 52  RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVAL 111

Query: 67  VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSI 126
              + +    + L+ + +++ G +D++V+ A    +V  I        D  +  NV +  
Sbjct: 112 PGDLKDEAFCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMF 171

Query: 127 LLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVN 185
            L + A PHL  G+S++   SI  YQP  ++  Y  TK A++  TKALA ++A    RVN
Sbjct: 172 WLCKAAIPHLPPGASIINTGSIQSYQPSPTLLDYASTKAAIVAFTKALAKQVAEKGIRVN 231

Query: 186 CVAPGFVPT 194
            VAPG V T
Sbjct: 232 AVAPGPVWT 240

Length = 300

>gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional

 Score = 96.2 bits (240), Expect = 4e-24
 Identities = 65/194 (33%), Positives = 99/194 (51%), Gaps = 9/194 (4%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV 63
           M     F GK  +V   T GI  GIA+     GA+V V+SR Q+ VD AV +L+  G E 
Sbjct: 1   MTTMFDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEG 60

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAAN---PSVDSILQTKESVLDKLWDI 120
           +GV   V +    +    Q  ++FG IDV+VS AA N   P+        ++V+    DI
Sbjct: 61  LGVSADVRDYAAVEAAFAQIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVV----DI 116

Query: 121 NVKSSILLLQDAAPHLQK-GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMA 179
           ++  +  +L+ A P L++ G+S++ IS+   + P    A     K  +  LT+ LA E  
Sbjct: 117 DLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVPMPMQAHVCAAKAGVDMLTRTLALEWG 176

Query: 180 PD-TRVNCVAPGFV 192
           P+  RVN + PG +
Sbjct: 177 PEGIRVNSIVPGPI 190

Length = 264

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score = 96.1 bits (240), Expect = 5e-24
 Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 17/209 (8%)

Query: 3   KMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIE 62
            M      +GKVA++T     +G  +A+ L   GA V +  R Q+  +  V ++KA G E
Sbjct: 1   MMPNLFSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGE 60

Query: 63  VIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAAN--------------PSVDSILQ 108
            + V   V + +  +    Q +E FG  D++++ A  N                  +   
Sbjct: 61  ALAVKADVLDKESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFD 120

Query: 109 TKESVLDKLWDINVKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTA 166
             E   + ++D+N+  ++L  Q  A  +  +KG +++ ISS+  + P + +  Y   K A
Sbjct: 121 LDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTPLTKVPAYSAAKAA 180

Query: 167 LLGLTKALAAEMA-PDTRVNCVAPGFVPT 194
           +   T+ LA   A    RVN +APGF  T
Sbjct: 181 ISNFTQWLAVHFAKVGIRVNAIAPGFFLT 209

Length = 278

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score = 95.6 bits (238), Expect = 6e-24
 Identities = 58/193 (30%), Positives = 97/193 (50%), Gaps = 12/193 (6%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI---EVIG 65
           R  GKVAI+T    GIG   A      GA VV++     ++D+   +  A  +   ++  
Sbjct: 1   RLDGKVAIITGGASGIGEATARLFAKHGARVVIA-----DIDDDAGQAVAAELGDPDISF 55

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAA-ANPSVDSILQTKESVLDKLWDINVKS 124
           V C V+     +  ++  + +FG++D++ +NA        SIL+T     +++ D+NV  
Sbjct: 56  VHCDVTVEADVRAAVDTAVARFGRLDIMFNNAGVLGAPCYSILETSLEEFERVLDVNVYG 115

Query: 125 SILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-D 181
           + L  + AA  +   K  S+V ++S+AG         Y  +K A+LGLT++ A E+    
Sbjct: 116 AFLGTKHAARVMIPAKKGSIVSVASVAGVVGGLGPHAYTASKHAVLGLTRSAATELGEHG 175

Query: 182 TRVNCVAPGFVPT 194
            RVNCV+P  V T
Sbjct: 176 IRVNCVSPYGVAT 188

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 95.1 bits (237), Expect = 6e-24
 Identities = 61/198 (30%), Positives = 96/198 (48%), Gaps = 21/198 (10%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
            R +GKVAIVT   +G+G   A  L  EGA VV+S     ++ +   +  A  +      
Sbjct: 1   NRLKGKVAIVTGGARGLGLAHARLLVAEGAKVVLS-----DILDEEGQAAAAELGDAARF 55

Query: 68  CH--VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESV----LDKLWDIN 121
            H  V++      +++   E FG++DV+V+NA           T E+       +L DIN
Sbjct: 56  FHLDVTDEDGWTAVVDTAREAFGRLDVLVNNAGI-----LTGGTVETTTLEEWRRLLDIN 110

Query: 122 VKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMA 179
           +    L  +   P +++  G S++ +SSI G     ++A Y  +K A+ GLTK+ A E A
Sbjct: 111 LTGVFLGTRAVIPPMKEAGGGSIINMSSIEGLVGDPALAAYNASKGAVRGLTKSAALECA 170

Query: 180 P---DTRVNCVAPGFVPT 194
                 RVN V PG++ T
Sbjct: 171 TQGYGIRVNSVHPGYIYT 188

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score = 95.6 bits (238), Expect = 6e-24
 Identities = 52/192 (27%), Positives = 84/192 (43%), Gaps = 11/192 (5%)

Query: 14  VAIVTASTQGIGFGIAERLGLEGASV-VVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           VAIVT +++GIG  IA  L   G  + +          E V ++ A G   I     +  
Sbjct: 3   VAIVTGASRGIGRAIATELAARGFDIAINDLPDDDQATEVVAEVLAAGRRAIYFQADIGE 62

Query: 73  GQQRKNLINQTIEKFGKIDVVVSNAAANPSV-DSILQTKESVLDKLWDINVKSSILLLQD 131
               + L++Q  E FG++D +V+NA         +L   E   D+L  IN++    L Q 
Sbjct: 63  LSDHEALLDQAWEDFGRLDCLVNNAGIAVRPRGDLLDLTEDSFDRLIAINLRGPFFLTQA 122

Query: 132 AA------PHLQKG--SSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-T 182
            A      P    G   S++ ++SI  Y    +   Y ++K  L   T+ LA  +A +  
Sbjct: 123 VARRMVEQPDRFDGPHRSIIFVTSINAYLVSPNRGEYCISKAGLSMATRLLAYRLADEGI 182

Query: 183 RVNCVAPGFVPT 194
            V+ + PG + T
Sbjct: 183 AVHEIRPGLIHT 194

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 95.9 bits (239), Expect = 7e-24
 Identities = 55/198 (27%), Positives = 99/198 (50%), Gaps = 12/198 (6%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
           K F GKVA++T +  G G   A      G  +V++  +Q  +D AV +L+A+G EV+GV 
Sbjct: 2   KDFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVR 61

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSI- 126
             VS+  Q + L +  +E+FG + ++ +NA    +   + +   +  + +  +N+   I 
Sbjct: 62  TDVSDAAQVEALADAALERFGAVHLLFNNAGVG-AGGLVWENSLADWEWVLGVNLWGVIH 120

Query: 127 -------LLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMA 179
                  L+L  A         +V  +S+AG     +M +Y V+K A++ LT+ L  +++
Sbjct: 121 GVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGIYNVSKHAVVSLTETLYQDLS 180

Query: 180 -PDTRVNC--VAPGFVPT 194
               +V    + P FVPT
Sbjct: 181 LVTDQVGASVLCPYFVPT 198

Length = 287

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 94.9 bits (236), Expect = 8e-24
 Identities = 58/197 (29%), Positives = 102/197 (51%), Gaps = 10/197 (5%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHV 70
           QGKVA+VT ++ GIG   A  L  EGA+V +++R+   ++    +L+A G + + +   V
Sbjct: 2   QGKVALVTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADELEAEGGKALVLELDV 61

Query: 71  SNGQQRKNLINQTIEKFGKIDVVVSNAAA---NPSVDSILQTKESVLDKLWDINVKSSIL 127
           ++ QQ    + +T+E  G++D++V+NA      P  D+   T +    ++ D N+   + 
Sbjct: 62  TDEQQVDAAVERTVEALGRLDILVNNAGIMLLGPVEDA--DTTD--WTRMIDTNLLGLMY 117

Query: 128 LLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRV 184
               A PH   +   ++V ISS+AG     + A+Y  TK  +   ++ L  E+     RV
Sbjct: 118 TTHAALPHHLLRNKGTIVNISSVAGRVAVRNSAVYNATKFGVNAFSEGLRQEVTERGVRV 177

Query: 185 NCVAPGFVPTHFAEYIT 201
             + PG V T   ++IT
Sbjct: 178 VVIEPGTVDTELRDHIT 194

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score = 94.8 bits (236), Expect = 9e-24
 Identities = 59/189 (31%), Positives = 93/189 (49%), Gaps = 5/189 (2%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
           R  G+VAIVT +  GIG   A+    EGA VVV+ R  +  +     + A G        
Sbjct: 2   RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGG-RAFARQG 60

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
            V + +  + L++    ++G++DV+V N A      +++ T E+  D +  +NV    L 
Sbjct: 61  DVGSAEAVEALVDFVAARWGRLDVLV-NNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLW 119

Query: 129 LQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVN 185
            + A P +Q+  G S+V  +S          A Y  +K A+  LT+A+A + A D  RVN
Sbjct: 120 AKYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVASKGAIASLTRAMALDHATDGIRVN 179

Query: 186 CVAPGFVPT 194
            VAPG + T
Sbjct: 180 AVAPGTIDT 188

Length = 252

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score = 95.0 bits (237), Expect = 9e-24
 Identities = 66/201 (32%), Positives = 95/201 (47%), Gaps = 32/201 (15%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
           M +RF GKV +VT + QGIG G+A R   EGA VV+  R +  V E   +L+A G E + 
Sbjct: 2   MNQRFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAAGGEALA 60

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAA----ANP----SVDSI-LQTKESVLDK 116
           +   +      +  +   +E FG+IDV+++N      A P      + I  + + S+   
Sbjct: 61  LTADLETYAGAQAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPT 120

Query: 117 LWDINVKSSILLLQDAAPHL--QKGSSVVLISSIA--GYQ--PQSSMAMYGVTKTALLGL 170
           LW           +   PH+  Q G ++V +SSIA  G    P      Y   K  +  L
Sbjct: 121 LW---------CCRAVLPHMLAQGGGAIVNVSSIATRGINRVP------YSAAKGGVNAL 165

Query: 171 TKALAAEMAPD-TRVNCVAPG 190
           T +LA E A    RVN VAPG
Sbjct: 166 TASLAFEYAEHGIRVNAVAPG 186

Length = 260

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score = 94.0 bits (234), Expect = 2e-23
 Identities = 59/194 (30%), Positives = 94/194 (48%), Gaps = 10/194 (5%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
           +++R  G+VA++T    GIG   A RL  EGA+VVV      ++D    K  A  +  + 
Sbjct: 1   LSQRLAGRVAVITGGGSGIGLATARRLAAEGATVVVG-----DIDPEAGKAAADEVGGLF 55

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVD-SILQTKESVLDKLWDINVKS 124
           V   V++      L +   E +G +D+  +NA  +P  D SIL T      ++ D+N+ S
Sbjct: 56  VPTDVTDEDAVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTS 115

Query: 125 SILLLQDAAPHL---QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD 181
             L  + A PH+    KGS +   S +A     +S   Y  +K  +L +++ L  + A  
Sbjct: 116 VYLCCKAALPHMVRQGKGSIINTASFVAVMGSATSQISYTASKGGVLAMSRELGVQFARQ 175

Query: 182 -TRVNCVAPGFVPT 194
             RVN + PG V T
Sbjct: 176 GIRVNALCPGPVNT 189

Length = 255

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score = 93.4 bits (233), Expect = 3e-23
 Identities = 60/201 (29%), Positives = 105/201 (52%), Gaps = 7/201 (3%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG-IEVIGVVC 68
            QGKV I+T ++ GIG  +A  L   GA +V+S+R+++ ++E   +    G      V  
Sbjct: 1   LQGKVVIITGASSGIGEELAYHLARLGARLVLSARREERLEEVKSECLELGAPSPHVVPL 60

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAA-ANPSVDSILQTKESVLDKLWDINVKSSIL 127
            +S+ +  + ++ + ++ FG +D++++NA  +  S+     T   V  K+ ++N    + 
Sbjct: 61  DMSDLEDAEQVVEEALKLFGGLDILINNAGISMRSL--FHDTSIDVDRKIMEVNYFGPVA 118

Query: 128 LLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMA-PDTRV 184
           L + A PHL  +   S+V++SSIAG         Y  +K AL G   +L AE++ P+  V
Sbjct: 119 LTKAALPHLIERSQGSIVVVSSIAGKIGVPFRTAYAASKHALQGFFDSLRAELSEPNISV 178

Query: 185 NCVAPGFVPTHFAEYITSNDG 205
             V PG + T+ A    S DG
Sbjct: 179 TVVCPGLIDTNIAMNALSGDG 199

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 93.3 bits (232), Expect = 4e-23
 Identities = 59/192 (30%), Positives = 101/192 (52%), Gaps = 11/192 (5%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
              GKVAIVT    G+G G A  L   GA +++++    N DE    ++  G +V  V  
Sbjct: 12  SLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGT-NWDETRRLIEKEGRKVTFVQV 70

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAA---NPSVDSILQTKESVLDKLWDINVKSS 125
            ++  +  + ++ + +E+FGKID++V+NA      P    +L+ K+   + + DIN+ S 
Sbjct: 71  DLTKPESAEKVVKEALEEFGKIDILVNNAGTIRRAP----LLEYKDEDWNAVMDINLNSV 126

Query: 126 ILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DT 182
             L Q  A  +  Q    ++ I+S+  +Q    +  Y  +K  + GLTKA A E+A  + 
Sbjct: 127 YHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVPAYTASKHGVAGLTKAFANELAAYNI 186

Query: 183 RVNCVAPGFVPT 194
           +VN +APG++ T
Sbjct: 187 QVNAIAPGYIKT 198

Length = 258

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 95.7 bits (238), Expect = 6e-23
 Identities = 58/189 (30%), Positives = 94/189 (49%), Gaps = 8/189 (4%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHV 70
           Q +V +VT +  GIG    +R    G  VVV+ R  +   E    L   G +   +   V
Sbjct: 4   QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL---GPDHHALAMDV 60

Query: 71  SNGQQRKNLINQTIEKFGKIDVVVSNAA-ANPSVDSILQTKESVLDKLWDINVKSSILLL 129
           S+  Q +    Q   +FG+IDV+V+NA   +P++ + L T      +L  IN+  + L+ 
Sbjct: 61  SDEAQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVA 120

Query: 130 QDAAPHL---QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVN 185
           ++A   +     G+++V ++S AG         Y  +K A++ LT++LA E A    RVN
Sbjct: 121 REALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKAAVISLTRSLACEWAAKGIRVN 180

Query: 186 CVAPGFVPT 194
            V PG+V T
Sbjct: 181 AVLPGYVRT 189

Length = 520

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score = 92.9 bits (231), Expect = 7e-23
 Identities = 56/198 (28%), Positives = 101/198 (51%), Gaps = 14/198 (7%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRK-QKNVDEAVVKLKARGIEVI 64
           M    +GKV ++T  + G+G  +A R G E A VV++ R  ++  ++   ++K  G E I
Sbjct: 1   MYSDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAI 60

Query: 65  GVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLD---KLWDIN 121
            V   V+      NLI   +++FG +DV+++NA     +++ + + E  L+   K+ + N
Sbjct: 61  AVKGDVTVESDVVNLIQTAVKEFGTLDVMINNAG----IENAVPSHEMSLEDWNKVINTN 116

Query: 122 VKSSILLLQDA----APHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAE 177
           +  + L  ++A      H  KG +++ +SS+    P      Y  +K  +  +T+ LA E
Sbjct: 117 LTGAFLGSREAIKYFVEHDIKG-NIINMSSVHEQIPWPLFVHYAASKGGVKLMTETLAME 175

Query: 178 MAPD-TRVNCVAPGFVPT 194
            AP   RVN + PG + T
Sbjct: 176 YAPKGIRVNNIGPGAINT 193

Length = 261

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 90.3 bits (225), Expect = 7e-23
 Identities = 45/170 (26%), Positives = 65/170 (38%), Gaps = 6/170 (3%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVV-SSRKQKN--VDEAVVKLKARGIEVIGVVCH 69
              ++T  T G+G  +A  L  EGA  +V  SR+       E V +L+A G EV    C 
Sbjct: 1   GTVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEALGAEVTVAACD 60

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLL 129
           V++      L+       G +D VV NA           T E   +++    V  +  L 
Sbjct: 61  VADRDALAALLAALPAALGPLDGVVHNAGVLDDGPLEELTPER-FERVLAPKVTGAWNLH 119

Query: 130 QDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMA 179
           +          + VL SS+AG       A Y     AL  L +   AE  
Sbjct: 120 ELTRD--LDLGAFVLFSSVAGVLGSPGQANYAAANAALDALAEHRRAEGL 167

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score = 92.0 bits (229), Expect = 1e-22
 Identities = 50/202 (24%), Positives = 91/202 (45%), Gaps = 22/202 (10%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCH 69
           + K+ ++T +   IG    + L   GA ++++      +++   +L       VI +   
Sbjct: 1   EDKIILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEELTNLYKNRVIALELD 60

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLW----DINVKSS 125
           +++ +  K LI   +EKFG+ID++++NA  +P V       E    + W    ++N+  +
Sbjct: 61  ITSKESIKELIESYLEKFGRIDILINNAYPSPKVWGS--RFEEFPYEQWNEVLNVNLGGA 118

Query: 126 ILLLQDAAPHL--QKGSSVVLISSIAG--------YQPQSSMAM---YGVTKTALLGLTK 172
            L  Q        Q   S++ I+SI G        Y+  + M     Y V K  ++ LTK
Sbjct: 119 FLCSQAFIKLFKKQGKGSIINIASIYGVIAPDFRIYE-NTQMYSPVEYSVIKAGIIHLTK 177

Query: 173 ALAAEMAP-DTRVNCVAPGFVP 193
            LA   A    RVN ++PG + 
Sbjct: 178 YLAKYYADTGIRVNAISPGGIL 199

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score = 92.0 bits (229), Expect = 1e-22
 Identities = 59/198 (29%), Positives = 91/198 (45%), Gaps = 24/198 (12%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVV-------------SSRKQKNVDEAVVK 55
           RF G+V +VT +  G+G   A      GA VVV             SS   K VDE    
Sbjct: 2   RFDGRVVLVTGAGGGLGRAYALAFAERGAKVVVNDLGGDRKGSGKSSSAADKVVDE---- 57

Query: 56  LKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLD 115
           +KA G + +     V +G++   ++   I+ FG++D++V+NA       S  +  E   D
Sbjct: 58  IKAAGGKAVANYDSVEDGEK---IVKTAIDAFGRVDILVNNAGILRDR-SFAKMSEEDWD 113

Query: 116 KLWDINVKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKA 173
            +  +++K S  + + A P++  QK   ++  SS AG       A Y   K  LLGL+  
Sbjct: 114 LVMRVHLKGSFKVTRAAWPYMRKQKFGRIINTSSAAGLYGNFGQANYSAAKLGLLGLSNT 173

Query: 174 LAAEMAP-DTRVNCVAPG 190
           LA E A  +   N +AP 
Sbjct: 174 LAIEGAKYNITCNTIAPA 191

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score = 91.4 bits (227), Expect = 4e-22
 Identities = 69/200 (34%), Positives = 102/200 (51%), Gaps = 15/200 (7%)

Query: 7   AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGV 66
           ++R  GKVA+VT    GIG  I       GA V +    Q ++ + V         V   
Sbjct: 13  SQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDL-QDDLGQNVCDSLGGEPNVCFF 71

Query: 67  VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAA-ANPSVDSILQTKESVLDKLWDINVKSS 125
            C V+        ++ T++KFG +D++V+NA    P    I   + S  +K++D+NVK  
Sbjct: 72  HCDVTVEDDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGV 131

Query: 126 ILLLQDAA----PHLQKGSSVVLIS---SIAGYQPQSSMAMYGVTKTALLGLTKALAAEM 178
            L ++ AA    P L+KGS V L S   +I G  P +    Y  +K A+LGLT+++AAE+
Sbjct: 132 FLGMKHAARIMIP-LKKGSIVSLCSVASAIGGLGPHA----YTGSKHAVLGLTRSVAAEL 186

Query: 179 APD-TRVNCVAPGFVPTHFA 197
                RVNCV+P  VPT  A
Sbjct: 187 GKHGIRVNCVSPYAVPTALA 206

Length = 280

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score = 89.6 bits (223), Expect = 7e-22
 Identities = 50/179 (27%), Positives = 82/179 (45%), Gaps = 4/179 (2%)

Query: 15  AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQ 74
            +VT + QGIG+ +A  L   GA V    R  + + E V  L+  G         V++  
Sbjct: 1   VLVTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELVADLRRYGYPFATYKLDVADSA 60

Query: 75  QRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAP 134
               ++ +   ++G IDV+V N A    + +I    +      + +N      + Q  +P
Sbjct: 61  AVDEVVQRLEREYGPIDVLV-NVAGILRLGAIDSLSDEDWQATFAVNTFGVFNVSQAVSP 119

Query: 135 HL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNCVAPG 190
            +  ++  ++V + S A   P+  MA Y  +K AL  LTK L  E+AP   R N V+PG
Sbjct: 120 RMKRRRSGAIVTVGSNAANVPRMGMAAYAASKAALTMLTKCLGLELAPYGIRCNVVSPG 178

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|168204 PRK05717, PRK05717, oxidoreductase; Validated

 Score = 89.9 bits (223), Expect = 8e-22
 Identities = 55/183 (30%), Positives = 98/183 (53%), Gaps = 5/183 (2%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
           G+VA+VT + +GIG GIA  L  EG  VV++   ++   +     KA G     +   V+
Sbjct: 10  GRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVA---KALGENAWFIAMDVA 66

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAA-ANPSVDSILQTKESVLDKLWDINVKSSILLLQ 130
           +  Q    + + + +FG++D +V NAA A+P   ++     +  +++  +N+   +LL +
Sbjct: 67  DEAQVAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAK 126

Query: 131 DAAPHLQ-KGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAP 189
             AP+L+    ++V ++S    Q +     Y  +K  LL LT ALA  + P+ RVN V+P
Sbjct: 127 HCAPYLRAHNGAIVNLASTRARQSEPDTEAYAASKGGLLALTHALAISLGPEIRVNAVSP 186

Query: 190 GFV 192
           G++
Sbjct: 187 GWI 189

Length = 255

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 89.6 bits (223), Expect = 8e-22
 Identities = 49/193 (25%), Positives = 85/193 (44%), Gaps = 11/193 (5%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSS-RKQKNVDEAVVKLKARGIEVIGVVCHVS 71
            VA+VT   +GIG GIA  L   G  + ++     + +     +L+A G+EVI     V+
Sbjct: 3   PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVA 62

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAAANPSV-DSILQTKESVLDKLWDINVKSSILLLQ 130
           +    + +++     +G+ID +V+NA     V   +L       D++  IN++    L Q
Sbjct: 63  DLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQ 122

Query: 131 DAAPHL--QKGS------SVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD- 181
             A  +  Q         S+V +SS+       +   Y ++K  L    +  AA +A + 
Sbjct: 123 AVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEYCISKAGLSMAAQLFAARLAEEG 182

Query: 182 TRVNCVAPGFVPT 194
             V  V PG + T
Sbjct: 183 IGVYEVRPGLIKT 195

Length = 256

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score = 89.9 bits (223), Expect = 9e-22
 Identities = 60/201 (29%), Positives = 98/201 (48%), Gaps = 18/201 (8%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVV-------------SSRKQKNVDEAVVKLK 57
           +GKVA +T + +G G   A RL  EGA ++                  ++++DE    ++
Sbjct: 2   EGKVAFITGAARGQGRAHAVRLAAEGADIIAIDLCAPLSDYPTYPLATREDLDETARLVE 61

Query: 58  ARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKL 117
           A G +V+     V +  + + ++   +E+FG++DVVV+NA    S     +  E   D +
Sbjct: 62  ALGRKVLARKADVRDLAEVRAVVEDGVEQFGRLDVVVANAGV-LSYGRSWELSEEQWDTV 120

Query: 118 WDINVKSSILLLQDAAPHL---QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKAL 174
            DIN+       +   PH+     G S+++ SS+AG +    +A Y   K  L+GLTK L
Sbjct: 121 LDINLTGVWRTCKAVVPHMIERGNGGSIIITSSVAGLKALPGLAHYAAAKHGLVGLTKTL 180

Query: 175 AAEMAP-DTRVNCVAPGFVPT 194
           A E+A    RVN + P  V T
Sbjct: 181 ANELAEYGIRVNSIHPYSVDT 201

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 89.1 bits (221), Expect = 1e-21
 Identities = 54/207 (26%), Positives = 102/207 (49%), Gaps = 13/207 (6%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG-IEVIGVV 67
           R++G+VA+VT ++ GIG  +A  L   G  VV  +R+   ++    + ++ G   +    
Sbjct: 3   RWRGRVALVTGASVGIGAAVARALVQHGMKVVGCARRVDKIEALAAECQSAGYPTLFPYQ 62

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAA-ANPSVDSILQTKESVLDKLWDINVKSSI 126
           C +SN +Q  ++ +    +   +DV ++NA  A P  + +L  K     +++D+NV +  
Sbjct: 63  CDLSNEEQILSMFSAIRTQHQGVDVCINNAGLARP--EPLLSGKTEGWKEMFDVNVLALS 120

Query: 127 LLLQDAAPHLQK----GSSVVLISSIAG--YQPQSSMAMYGVTKTALLGLTKALAAEM-- 178
           +  ++A   +++       ++ I+S++G    P S    Y  TK A+  LT+ L  E+  
Sbjct: 121 ICTREAYQSMKERNVDDGHIININSMSGHRVPPVSVFHFYAATKHAVTALTEGLRQELRE 180

Query: 179 -APDTRVNCVAPGFVPTHFAEYITSND 204
                R   ++PG V T FA  +  ND
Sbjct: 181 AKTHIRATSISPGLVETEFAFKLHDND 207

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score = 89.4 bits (222), Expect = 1e-21
 Identities = 57/192 (29%), Positives = 94/192 (48%), Gaps = 6/192 (3%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA--RGIEVIGVVCH 69
           GKVA+VT ST GIG GIA  L   GA++V++        EAV    A   G++V+     
Sbjct: 2   GKVALVTGSTSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAAKHGVKVLYHGAD 61

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLL 129
           +S     ++++     +FG +D++V+NA     V  I        D +  +N+ +     
Sbjct: 62  LSKPAAIEDMVAYAQRQFGGVDILVNNAGIQ-HVAPIEDFPTEKWDAIIALNLSAVFHTT 120

Query: 130 QDAAPHLQKGS--SVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNC 186
           + A PH++K     ++ I+S+ G    ++ + Y   K  ++GLTK +A E A      N 
Sbjct: 121 RLALPHMKKQGWGRIINIASVHGLVASANKSAYVAAKHGVVGLTKVVALETAGTGVTCNA 180

Query: 187 VAPGFVPTHFAE 198
           + PG+V T   E
Sbjct: 181 ICPGWVLTPLVE 192

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 91.8 bits (228), Expect = 2e-21
 Identities = 48/184 (26%), Positives = 89/184 (48%), Gaps = 4/184 (2%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
            +V  +T   +GIG  +A+R    G  +++  R     + A    +A G E + V   ++
Sbjct: 269 PRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDA---EGAKKLAEALGDEHLSVQADIT 325

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQD 131
           +    ++   Q   ++G++DV+V+NA         L+       +++D+N+  +    + 
Sbjct: 326 DEAAVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARA 385

Query: 132 AAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPG 190
           AA  + +G  +V + SIA          Y  +K A+  L+++LA E AP   RVN VAPG
Sbjct: 386 AARLMSQGGVIVNLGSIASLLALPPRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPG 445

Query: 191 FVPT 194
           ++ T
Sbjct: 446 YIET 449

Length = 520

>gnl|CDD|181188 PRK07985, PRK07985, oxidoreductase; Provisional

 Score = 89.7 bits (222), Expect = 2e-21
 Identities = 57/189 (30%), Positives = 94/189 (49%), Gaps = 3/189 (1%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK--LKARGIEVIGV 66
           R + + A+VT    GIG   A     EGA V +S    +  D   VK  ++  G + + +
Sbjct: 46  RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLL 105

Query: 67  VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSI 126
              +S+ +  ++L+++  +  G +D++   A    ++  I         K + INV +  
Sbjct: 106 PGDLSDEKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALF 165

Query: 127 LLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVN 185
            L Q+A P L KG+S++  SSI  YQP   +  Y  TK A+L  ++ LA ++A    RVN
Sbjct: 166 WLTQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVN 225

Query: 186 CVAPGFVPT 194
            VAPG + T
Sbjct: 226 IVAPGPIWT 234

Length = 294

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score = 89.1 bits (221), Expect = 2e-21
 Identities = 57/189 (30%), Positives = 101/189 (53%), Gaps = 3/189 (1%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
           KR + KVA++T ++ GIG   A  L  EGA V+     +  V E V K+K+ G +     
Sbjct: 2   KRLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIAEA-VSETVDKIKSNGGKAKAYH 60

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
             +S+ QQ K+  ++  E+FG++DV+ +NA  + +   I +    V DK+  ++++ + L
Sbjct: 61  VDISDEQQVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFL 120

Query: 128 LLQDAAP-HLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVN 185
           + +   P  +++G S++  SS +G       + Y   K A++  TK++A E   D  R N
Sbjct: 121 MTKMLLPLMMEQGGSIINTSSFSGQAADLYRSGYNAAKGAVINFTKSIAIEYGRDGIRAN 180

Query: 186 CVAPGFVPT 194
            +APG + T
Sbjct: 181 AIAPGTIET 189

Length = 272

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score = 87.5 bits (217), Expect = 5e-21
 Identities = 60/222 (27%), Positives = 108/222 (48%), Gaps = 9/222 (4%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVV----SSRKQKNVDEAVVKLKARGIEVIGVV 67
            +  ++T  + G+G  IA RL  +GA V+V      R +   D     ++A G + +G+ 
Sbjct: 6   SRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLA 65

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
             V +    +  ++  +E+FG++D++V+NA       +  +      D + D+N+     
Sbjct: 66  FDVRDFAATRAALDAGVEEFGRLDILVNNAGIATDA-AFAELSIEEWDDVIDVNLDGFFN 124

Query: 128 LLQDAAPHL---QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTR 183
           + Q A P +   ++G  +V I+S+AG +       Y  +K  L+GLTK LA E+AP    
Sbjct: 125 VTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVNYAASKAGLIGLTKTLANELAPRGIT 184

Query: 184 VNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV 225
           VN VAPG + T  A+     + +++ V   +L  P  +   V
Sbjct: 185 VNAVAPGAINTPMADNAAPTEHLLNPVPVQRLGEPDEVAALV 226

Length = 249

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score = 87.5 bits (217), Expect = 5e-21
 Identities = 63/188 (33%), Positives = 102/188 (54%), Gaps = 7/188 (3%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHV 70
           +GKVA+VT +  G+G GIA  L   GA +V + R +    E   +++A G   + +   +
Sbjct: 4   EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSE--PSETQQQVEALGRRFLSLTADL 61

Query: 71  SNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQ 130
           S+ +  K L++  +E+FG ID++V+NA      D+  +  E   D + ++N+KS   L Q
Sbjct: 62  SDIEAIKALVDSAVEEFGHIDILVNNAGIIRRADAE-EFSEKDWDDVMNVNLKSVFFLTQ 120

Query: 131 DAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNC 186
            AA H  K   G  ++ I+S+  +Q    +  Y  +K A+ GLTK LA E A     VN 
Sbjct: 121 AAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASKHAVAGLTKLLANEWAAKGINVNA 180

Query: 187 VAPGFVPT 194
           +APG++ T
Sbjct: 181 IAPGYMAT 188

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score = 87.3 bits (217), Expect = 6e-21
 Identities = 42/188 (22%), Positives = 85/188 (45%), Gaps = 9/188 (4%)

Query: 14  VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNG 73
           + ++T    GIG  +A      GA VV+    +K  +E    ++  G +V    C VS  
Sbjct: 1   IVLITGGGSGIGRLLALEFAKRGAKVVILDINEKGAEETANNVRKAGGKVHYYKCDVSKR 60

Query: 74  QQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAA 133
           ++      +  ++ G + ++++NA    S   +L+  +  ++K +++N  +     +   
Sbjct: 61  EEVYEAAKKIKKEVGDVTILINNAGV-VSGKKLLELPDEEIEKTFEVNTLAHFWTTKAFL 119

Query: 134 PHL---QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEM----APDTRVNC 186
           P +     G  +V I+S+AG    + +A Y  +K A +G  ++L  E+     P  +   
Sbjct: 120 PDMLERNHG-HIVTIASVAGLISPAGLADYCASKAAAVGFHESLRLELKAYGKPGIKTTL 178

Query: 187 VAPGFVPT 194
           V P F+ T
Sbjct: 179 VCPYFINT 186

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score = 87.4 bits (216), Expect = 6e-21
 Identities = 60/196 (30%), Positives = 103/196 (52%), Gaps = 9/196 (4%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
             GK A++T ++ GIG  +A      GA V +++R    +++   ++   G +V+ V C 
Sbjct: 7   LHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCD 66

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLL 129
           VS  QQ  ++++Q   + G ID+ V NA    +V  +L        +L + NV    L  
Sbjct: 67  VSQHQQVTSMLDQVTAELGGIDIAVCNAGI-ITVTPMLDMPLEEFQRLQNTNVTGVFLTA 125

Query: 130 QDAAPHL---QKGSSVVLISSIAGY---QPQSSMAMYGVTKTALLGLTKALAAEMAP-DT 182
           Q AA  +    +G  ++  +S++G+    PQ  ++ Y  +K A++ LTKA+A E+AP   
Sbjct: 126 QAAAKAMVKQGQGGVIINTASMSGHIINVPQ-QVSHYCASKAAVIHLTKAMAVELAPHKI 184

Query: 183 RVNCVAPGFVPTHFAE 198
           RVN V+PG++ T   E
Sbjct: 185 RVNSVSPGYILTELVE 200

Length = 253

>gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 87.1 bits (216), Expect = 8e-21
 Identities = 54/205 (26%), Positives = 84/205 (40%), Gaps = 29/205 (14%)

Query: 11  QGKVAIVTASTQ--GIGFGIAERLGLEGASVVVSSRKQKNVDEAV-------VKLKARGI 61
             K+A+VT +++  GIG  +  RL  +G  +  +     +            V LK   I
Sbjct: 4   MKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEE-I 62

Query: 62  EVIGVVCH-----VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDK 116
           E  GV C      +S       +     E+ G   ++++NAA   +   + +     LDK
Sbjct: 63  ESYGVRCEHMEIDLSQPYAPNRVFYAVSERLGDPSILINNAA-YSTHTRLEELTAEQLDK 121

Query: 117 LWDINVKSSILLLQDAAPH---LQKGSSVVLISSIAGYQPQSSMA---MYGVTKTALLGL 170
            + +NV++++LL    A        G  + L S     Q    M     Y  TK A+   
Sbjct: 122 HYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSG----QSLGPMPDELAYAATKGAIEAF 177

Query: 171 TKALAAEMAPD-TRVNCVAPGFVPT 194
           TK+LA E+A     VN V PG  PT
Sbjct: 178 TKSLAPELAEKGITVNAVNPG--PT 200

Length = 256

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score = 86.9 bits (216), Expect = 8e-21
 Identities = 49/188 (26%), Positives = 81/188 (43%), Gaps = 13/188 (6%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
            A  F GK   VT + QGIG+ +A      GA V+   +     ++              
Sbjct: 2   NAMDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFLTQEDYPFAT--------- 52

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSS 125
            V  VS+      +  + + + G +DV+V NAA    + +     +    + + +N   +
Sbjct: 53  FVLDVSDAAAVAQVCQRLLAETGPLDVLV-NAAGILRMGATDSLSDEDWQQTFAVNAGGA 111

Query: 126 ILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DT 182
             L +   P    Q+  ++V + S A + P+  MA YG +K AL  L K +  E+AP   
Sbjct: 112 FNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIGMAAYGASKAALTSLAKCVGLELAPYGV 171

Query: 183 RVNCVAPG 190
           R N V+PG
Sbjct: 172 RCNVVSPG 179

Length = 252

>gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional

 Score = 86.9 bits (215), Expect = 1e-20
 Identities = 62/212 (29%), Positives = 98/212 (46%), Gaps = 14/212 (6%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
           F G+ A++T    GIG          GA VV+    +  + +AV  L+A G +V GV+C 
Sbjct: 4   FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCD 63

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAA---ANPSVDSILQTKESVLDKLWDINVKSSI 126
           V + ++  +L ++     G +DVV SNA      P V+        V+    D+++  SI
Sbjct: 64  VRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVI----DVDLWGSI 119

Query: 127 LLLQDAAPHL---QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-T 182
             ++   P L     G  VV  +S AG  P + +  YGV K  ++GL + LA E+  D  
Sbjct: 120 HTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGI 179

Query: 183 RVNCVAPGFVPTHF---AEYITSNDGVVSSVS 211
            V+ + P  V T+    +E I       SS +
Sbjct: 180 GVSVLCPMVVETNLVANSERIRGAACAQSSTT 211

Length = 275

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score = 86.6 bits (215), Expect = 1e-20
 Identities = 63/198 (31%), Positives = 95/198 (47%), Gaps = 28/198 (14%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHV-- 70
           +VAIVTAS  GIG   A  L  +G  + ++       DE   K  A  +   GV   +  
Sbjct: 3   QVAIVTASDSGIGKACALLLAQQGFDIGITWHS----DEEGAKETAEEVRSHGVRAEIRQ 58

Query: 71  ---SNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLD-------KLWDI 120
              S+  +    +++ I++ G+IDV+V+NA A         TK   LD       K++ +
Sbjct: 59  LDLSDLPEGAQALDKLIQRLGRIDVLVNNAGAM--------TKAPFLDMDFDEWRKIFTV 110

Query: 121 NVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAE 177
           +V  + L  Q AA H+ K   G  ++ I+S+  + P    + Y   K AL GLTKA+A E
Sbjct: 111 DVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKHALGGLTKAMALE 170

Query: 178 MAP-DTRVNCVAPGFVPT 194
           +      VN VAPG + T
Sbjct: 171 LVEHGILVNAVAPGAIAT 188

Length = 256

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 85.4 bits (212), Expect = 3e-20
 Identities = 56/190 (29%), Positives = 88/190 (46%), Gaps = 13/190 (6%)

Query: 14  VAIVTASTQGIGFGIAERLGLEGAS--VVVSSRKQKNVDEAVVKLKAR---GIEVIGVVC 68
           V I+T +++GIG  +AE L   G+   VV+ +R +    E + +LK     G+ V  V  
Sbjct: 1   VIILTGASRGIGRALAEELLKRGSPSVVVLLARSE----EPLQELKEELRPGLRVTTVKA 56

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
            +S+    + L+    +  G+ D++++NA +   V  I       L K +D+N+ S + L
Sbjct: 57  DLSDAAGVEQLLEAIRKLDGERDLLINNAGSLGPVSKIEFIDLDELQKYFDLNLTSPVCL 116

Query: 129 LQDAAPHLQKGSS---VVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVN 185
                   +K      VV +SS A   P     +Y  +K A     + LAAE  PD RV 
Sbjct: 117 TSTLLRAFKKRGLKKTVVNVSSGAAVNPFKGWGLYCSSKAARDMFFRVLAAEE-PDVRVL 175

Query: 186 CVAPGFVPTH 195
             APG V T 
Sbjct: 176 SYAPGVVDTD 185

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score = 84.9 bits (210), Expect = 5e-20
 Identities = 56/188 (29%), Positives = 93/188 (49%), Gaps = 12/188 (6%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
           RF+GKV +VT + QGIG G+AERL  EGA V++  R +  V E + ++ A G        
Sbjct: 1   RFEGKVVVVTGAAQGIGRGVAERLAGEGARVLLVDRSEL-VHEVLAEILAAGDAAHVHTA 59

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
            +      + ++   +E+FG++DV+++N             +E  ++     ++  ++  
Sbjct: 60  DLETYAGAQGVVRAAVERFGRVDVLINNVGGTIWAKPYEHYEEEQIEAEIRRSLFPTLWC 119

Query: 129 LQDAAPHL--QKGSSVVLISSIA---GYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-T 182
            +   PH+  ++   +V +SSIA    Y+       Y   K  +  LT +LA E A D  
Sbjct: 120 CRAVLPHMLERQQGVIVNVSSIATRGIYR-----IPYSAAKGGVNALTASLAFEHARDGI 174

Query: 183 RVNCVAPG 190
           RVN VAPG
Sbjct: 175 RVNAVAPG 182

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score = 84.0 bits (208), Expect = 9e-20
 Identities = 55/221 (24%), Positives = 103/221 (46%), Gaps = 11/221 (4%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNV-DEAVVKLKARGIEVIGVVCHVS 71
           K+A+VT + +GIG  IA  L  +G  V+ +     +   +   +      +V      V+
Sbjct: 3   KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVT 62

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQ--TKESVLDKLWDINVKSSILLL 129
           + ++    + +  E+ G +D++V+NA    + DS+ +  + +   D + + N+ S   + 
Sbjct: 63  DTEECAEALAEIEEEEGPVDILVNNAGI--TRDSVFKRMSHQEWNDVI-NTNLNSVFNVT 119

Query: 130 QDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNC 186
           Q     +  Q    ++ ISS+ G + Q     Y   K  ++G TKALA+E A     VNC
Sbjct: 120 QPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGMIGFTKALASEGARYGITVNC 179

Query: 187 VAPGFVPTHFAEYITS--NDGVVSSVSSLKLSPPSSLTLAV 225
           +APG++ T   E +       +V+ +   +L  P  +  AV
Sbjct: 180 IAPGYIATPMVEQMGPEVLQSIVNQIPMKRLGTPEEIAAAV 220

Length = 245

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score = 84.3 bits (209), Expect = 1e-19
 Identities = 49/187 (26%), Positives = 100/187 (53%), Gaps = 4/187 (2%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHV 70
           +GK+A++T ++ GIGF IA+     GA++V +   Q+ VD+ +   +  GIE  G VC V
Sbjct: 9   KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDV 68

Query: 71  SNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQ 130
           ++    + +++Q  ++ G ID++V+NA     +  +L+       ++ DI++ +  ++ +
Sbjct: 69  TDEDGVQAMVSQIEKEVGVIDILVNNAGIIKRI-PMLEMSAEDFRQVIDIDLNAPFIVSK 127

Query: 131 DAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCV 187
              P + K     ++ I S+     + +++ Y   K  L  LTK +A+E    + + N +
Sbjct: 128 AVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGI 187

Query: 188 APGFVPT 194
            PG++ T
Sbjct: 188 GPGYIAT 194

Length = 265

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 83.9 bits (208), Expect = 1e-19
 Identities = 55/202 (27%), Positives = 98/202 (48%), Gaps = 25/202 (12%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHV 70
           + KV ++T   QG+G  +AE L  +GA + +    Q+ ++EAV +  A G EV G   +V
Sbjct: 4   KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANV 63

Query: 71  SNGQQRKNLINQTIEKFGKIDVVVSNAAAN------PSVDSILQTK------ESVLDKLW 118
           ++ +  +    Q  E FG+++ +++NA          + D  + +K      +SV+    
Sbjct: 64  TDEEDVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVI---- 119

Query: 119 DINVKSSILLLQDAAPHL---QKGSSVVLISSI--AGYQPQSSMAMYGVTKTALLGLTKA 173
           D+N+    L  ++AA  +        ++ ISSI  AG   Q++   Y  +K  +  +T  
Sbjct: 120 DVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGNMGQTN---YSASKAGVAAMTVT 176

Query: 174 LAAEMAP-DTRVNCVAPGFVPT 194
            A E+A    RV  +APG + T
Sbjct: 177 WAKELARYGIRVAAIAPGVIET 198

Length = 253

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score = 83.6 bits (207), Expect = 1e-19
 Identities = 53/199 (26%), Positives = 83/199 (41%), Gaps = 14/199 (7%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV 63
           M MA  F GK  +VT ++ GIG   A  L   GA VV ++R    +D    +     + +
Sbjct: 1   MNMAFDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRL 60

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVK 123
                 V +       I   +   G  D +V+ A    S++S L       D++  +N +
Sbjct: 61  -----DVGDDAA----IRAALAAAGAFDGLVNCAGIA-SLESALDMTAEGFDRVMAVNAR 110

Query: 124 SSILLLQDAAPHL---QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP 180
            + L+ +  A  +    +G S+V +SS A          Y  +K AL  +T+ L  E+ P
Sbjct: 111 GAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCASKAALDAITRVLCVELGP 170

Query: 181 -DTRVNCVAPGFVPTHFAE 198
              RVN V P    T  A 
Sbjct: 171 HGIRVNSVNPTVTLTPMAA 189

Length = 245

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score = 84.2 bits (209), Expect = 1e-19
 Identities = 61/190 (32%), Positives = 92/190 (48%), Gaps = 10/190 (5%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI-EVIGVV 67
             +GKV  +T   +GIG   A  L   GA V +      ++DEA+ K  A  +  V+G  
Sbjct: 2   DLRGKVVAITGGARGIGLATARALAALGARVAIG-----DLDEALAKETAAELGLVVGGP 56

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
             V++       ++      G IDV+V+NA   P V   L   ++V  ++ D+NV   IL
Sbjct: 57  LDVTDPASFAAFLDAVEADLGPIDVLVNNAGVMP-VGPFLDEPDAVTRRILDVNVYGVIL 115

Query: 128 LLQDAAPH-LQKGSS-VVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRV 184
             + AAP  + +G   VV ++S+AG  P   MA Y  +K A++G T A   E+      V
Sbjct: 116 GSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASKHAVVGFTDAARLELRGTGVHV 175

Query: 185 NCVAPGFVPT 194
           + V P FV T
Sbjct: 176 SVVLPSFVNT 185

Length = 273

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score = 83.7 bits (207), Expect = 1e-19
 Identities = 53/190 (27%), Positives = 85/190 (44%), Gaps = 10/190 (5%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           +V +VT +++G+G  IA     EGA VVV+  +     EAV      G   I +   V +
Sbjct: 1   QVVLVTGASRGLGAAIARSFAREGARVVVNYYRSTESAEAVAAEA--GERAIAIQADVRD 58

Query: 73  GQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLD-----KLWDINVKSSIL 127
             Q + +I +    FG +D +V+NA  +   D   +     +D     +  +  VK ++ 
Sbjct: 59  RDQVQAMIEEAKNHFGPVDTIVNNALIDFPFDPDQRKTFDTIDWEDYQQQLEGAVKGALN 118

Query: 128 LLQDAAPHLQKGSS--VVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRV 184
           LLQ   P  ++  S  V+ I +     P      Y   K ALLG T+ +A E+ P    V
Sbjct: 119 LLQAVLPDFKERGSGRVINIGTNLFQNPVVPYHDYTTAKAALLGFTRNMAKELGPYGITV 178

Query: 185 NCVAPGFVPT 194
           N V+ G +  
Sbjct: 179 NMVSGGLLKV 188

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 82.8 bits (205), Expect = 3e-19
 Identities = 52/195 (26%), Positives = 101/195 (51%), Gaps = 4/195 (2%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
           MA+  QGK A++T + +GIG  +A  L  EG +V + +R ++N+     +++A G++V+ 
Sbjct: 1   MAQSLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVI 60

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSS 125
               VS+ ++    I Q   + G ID++++NA  +      L+   +  +K+  +N+   
Sbjct: 61  ATADVSDYEEVTAAIEQLKNELGSIDILINNAGIS-KFGKFLELDPAEWEKIIQVNLMGV 119

Query: 126 ILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DT 182
               +   P +  ++   ++ ISS AG +  +  + Y  +K  +LGLT++L  E+   + 
Sbjct: 120 YYATRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYSASKFGVLGLTESLMQEVRKHNI 179

Query: 183 RVNCVAPGFVPTHFA 197
           RV  + P  V T  A
Sbjct: 180 RVTALTPSTVATDMA 194

Length = 239

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score = 83.1 bits (205), Expect = 3e-19
 Identities = 50/193 (25%), Positives = 94/193 (48%), Gaps = 16/193 (8%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
             GK A++T S +GIG   A+    EGA V +        D  +   +A   E+    C 
Sbjct: 1   LDGKTALITGSARGIGRAFAQAYVREGARVAI-------ADINLEAARATAAEIGPAACA 53

Query: 70  VSNGQQRKNLINQTI----EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSS 125
           +S     +  I++ +    +++G ID++V+NAA    +  I+       D+L+ INV  +
Sbjct: 54  ISLDVTDQASIDRCVAALVDRWGSIDILVNNAALF-DLAPIVDITRESYDRLFAINVSGT 112

Query: 126 ILLLQDAAPHL---QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-D 181
           + ++Q  A  +    +G  ++ ++S AG + ++ + +Y  TK A++ LT++    +    
Sbjct: 113 LFMMQAVARAMIAQGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHG 172

Query: 182 TRVNCVAPGFVPT 194
             VN +APG V  
Sbjct: 173 INVNAIAPGVVDG 185

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score = 85.0 bits (211), Expect = 4e-19
 Identities = 59/197 (29%), Positives = 87/197 (44%), Gaps = 15/197 (7%)

Query: 7   AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGV 66
              F GK+ +VT +  GIG   A     EGA VV S     ++DEA  +  A  I   G 
Sbjct: 310 RGPFSGKLVVVTGAGSGIGRETALAFAREGAEVVAS-----DIDEAAAERTAELIRAAGA 364

Query: 67  VCH-----VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDIN 121
           V H     VS+    +        + G  D+VV+NA    +    L T     D++ D+N
Sbjct: 365 VAHAYRVDVSDADAMEAFAEWVRAEHGVPDIVVNNAGIGMA-GGFLDTSAEDWDRVLDVN 423

Query: 122 VKSSILLLQDAAPHLQ---KGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEM 178
           +   I   +     +     G  +V ++S A Y P  S+  Y  +K A+L L++ L AE+
Sbjct: 424 LWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATSKAAVLMLSECLRAEL 483

Query: 179 AP-DTRVNCVAPGFVPT 194
           A     V  + PGFV T
Sbjct: 484 AAAGIGVTAICPGFVDT 500

Length = 582

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score = 83.0 bits (206), Expect = 4e-19
 Identities = 51/197 (25%), Positives = 89/197 (45%), Gaps = 23/197 (11%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVS-------SRKQKNVDEAVVKLKARGIE 62
             GK   +T +++GIG  IA R   +GA++V++        +    +  A  +++A G +
Sbjct: 4   LSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQ 63

Query: 63  VIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINV 122
            + +V  V +  Q    + + +E+FG ID+ V+NA+A  ++     T     D +  INV
Sbjct: 64  ALPLVGDVRDEDQVAAAVAKAVERFGGIDICVNNASA-INLTGTEDTPMKRFDLMQQINV 122

Query: 123 KSSILLLQDAAPHLQKGSS---------VVLISSIAGYQPQSSMAMYGVTKTALLGLTKA 173
           + + L+ Q   PHL+K  +         + L           +MA YG++   L      
Sbjct: 123 RGTFLVSQACLPHLKKSENPHILTLSPPLNLDPKWFAPHTAYTMAKYGMSLCTL-----G 177

Query: 174 LAAEMAPD-TRVNCVAP 189
           LA E   D   VN + P
Sbjct: 178 LAEEFRDDGIAVNALWP 194

Length = 273

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 82.3 bits (203), Expect = 5e-19
 Identities = 54/187 (28%), Positives = 96/187 (51%), Gaps = 7/187 (3%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
           GKVAI+T    G+G G+A  L   GA +V          E   +++A G +   +   + 
Sbjct: 8   GKVAIITGCNTGLGQGMAIGLAKAGADIV--GVGVAEAPETQAQVEALGRKFHFITADLI 65

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQD 131
             +   ++++Q +E  G ID++++NA      D +L+      D + +IN K+   L Q 
Sbjct: 66  QQKDIDSIVSQAVEVMGHIDILINNAGIIRRQD-LLEFGNKDWDDVININQKTVFFLSQA 124

Query: 132 AAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCV 187
            A    K   G  ++ I+S+  +Q    +  Y  +K+A++GLT+ALA E++  +  VN +
Sbjct: 125 VAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASKSAVMGLTRALATELSQYNINVNAI 184

Query: 188 APGFVPT 194
           APG++ T
Sbjct: 185 APGYMAT 191

Length = 251

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 81.5 bits (202), Expect = 9e-19
 Identities = 53/193 (27%), Positives = 92/193 (47%), Gaps = 6/193 (3%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCHV 70
           G  A+VT +T GIG   AE L   G +V++ SR Q+ +D    +++ + G+E   +    
Sbjct: 1   GTWAVVTGATDGIGKAYAEELAKRGFNVILISRTQEKLDAVAKEIEEKYGVETKTIAADF 60

Query: 71  SNGQQRKNLINQTIEKFGKIDVVVSNAAANPSV-DSILQTKESVLDKLWDINVKSSILLL 129
           S G      I + +E    I ++V+N   + S+ +  L+T E  L  + ++NV +++ + 
Sbjct: 61  SAGDDIYERIEKELEGL-DIGILVNNVGISHSIPEYFLETPEDELQDIINVNVMATLKMT 119

Query: 130 QDAAPHLQKGSS--VVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RVNC 186
           +   P + K     +V ISS AG  P   +A Y  +K  L   ++AL  E       V  
Sbjct: 120 RLILPGMVKRKKGAIVNISSFAGLIPTPLLATYSASKAFLDFFSRALYEEYKSQGIDVQS 179

Query: 187 VAPGFVPTHFAEY 199
           + P  V T  ++ 
Sbjct: 180 LLPYLVATKMSKI 192

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 80.8 bits (200), Expect = 1e-18
 Identities = 52/192 (27%), Positives = 93/192 (48%), Gaps = 14/192 (7%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
             G   ++T  T GIG  +A +    G +V+++ R+++ + EA  +L      +  +V  
Sbjct: 3   LTGNTVLITGGTSGIGLALARKFLEAGNTVIITGRREERLAEAKKELPN----IHTIVLD 58

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKL---WDINVKSSI 126
           V + +  + L    + ++  +D++++NA     +D  L+   S LDK     D N+   I
Sbjct: 59  VGDAESVEALAEALLSEYPNLDILINNAGIQRPID--LRDPASDLDKADTEIDTNLIGPI 116

Query: 127 LLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRV 184
            L++   PHL  Q  +++V +SS   + P ++  +Y  TK AL   T AL  ++  DT V
Sbjct: 117 RLIKAFLPHLKKQPEATIVNVSSGLAFVPMAANPVYCATKAALHSYTLALRHQLK-DTGV 175

Query: 185 NCV--APGFVPT 194
             V   P  V T
Sbjct: 176 EVVEIVPPAVDT 187

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 81.2 bits (201), Expect = 1e-18
 Identities = 55/198 (27%), Positives = 93/198 (46%), Gaps = 14/198 (7%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEV 63
           M  + +G+VA+VT  + GIG    E L   GASV +  R ++ +  A  +L+ +  G  +
Sbjct: 2   MQIQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARL 61

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLW--DIN 121
           +   C V +             +FG +D++V+NA         + T     D  W  ++ 
Sbjct: 62  LAARCDVLDEADVAAFAAAVEARFGGVDMLVNNAG-----QGRVSTFADTTDDAWRDELE 116

Query: 122 VK-SSILLLQDAA-PHLQKGS--SVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAE 177
           +K  S++    A  P L+  +  S+V ++S+   QP+  M      +  LL L K+LA E
Sbjct: 117 LKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPHMVATSAARAGLLNLVKSLATE 176

Query: 178 MAPD-TRVNCVAPGFVPT 194
           +AP   RVN +  G V +
Sbjct: 177 LAPKGVRVNSILLGLVES 194

Length = 265

>gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated

 Score = 80.7 bits (199), Expect = 2e-18
 Identities = 53/190 (27%), Positives = 96/190 (50%), Gaps = 7/190 (3%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
            +GKVA+VT    G+G G+A  LGL  A   +         E + ++ A G   + +   
Sbjct: 8   LEGKVAVVTGCDTGLGQGMA--LGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTAD 65

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLL 129
           +        L+ + + +FG ID++V+NA      D+I +  E   D + ++N+KS   + 
Sbjct: 66  LRKIDGIPALLERAVAEFGHIDILVNNAGLIRREDAI-EFSEKDWDDVMNLNIKSVFFMS 124

Query: 130 QDAAPHL---QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVN 185
           Q AA H      G  ++ I+S+  +Q    +  Y  +K+ ++G+T+ +A E A  +  VN
Sbjct: 125 QAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSGVMGVTRLMANEWAKHNINVN 184

Query: 186 CVAPGFVPTH 195
            +APG++ T+
Sbjct: 185 AIAPGYMATN 194

Length = 253

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 80.7 bits (200), Expect = 2e-18
 Identities = 58/195 (29%), Positives = 96/195 (49%), Gaps = 24/195 (12%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHV 70
             KVA+VT ++ GIG   AE+L   G  V  +SR               G+E++     V
Sbjct: 3   NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAA------PIPGVELL--ELDV 54

Query: 71  SNGQQRKNLINQTIEKFGKIDVVVSNA------AANPSVDSILQTKESVLDKLWDINVKS 124
           ++    +  +++ I + G+IDV+V+NA      AA  S  SI Q +      L+D NV  
Sbjct: 55  TDDASVQAAVDEVIARAGRIDVLVNNAGVGLAGAAEES--SIAQAQA-----LFDTNVFG 107

Query: 125 SILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-D 181
            + + +   PH+  Q    ++ ISS+ G+ P   MA+Y  +K A+ G +++L  E+    
Sbjct: 108 ILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPYMALYAASKHAVEGYSESLDHEVRQFG 167

Query: 182 TRVNCVAPGFVPTHF 196
            RV+ V P +  T+F
Sbjct: 168 IRVSLVEPAYTKTNF 182

Length = 270

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score = 80.3 bits (199), Expect = 3e-18
 Identities = 58/216 (26%), Positives = 95/216 (43%), Gaps = 26/216 (12%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ-KNVDEAVVKLKARGIE 62
           M       GK A+VT  T+GIG     RL   GA VV ++R +  ++ E V  + A    
Sbjct: 1   MSFFLELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDDLPEGVEFVAADLTT 60

Query: 63  VIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAAN--PSVDSILQTKESVLDKLWDI 120
             G             +    +E+ G +D++V     +  P+      T E   D+L ++
Sbjct: 61  AEGC----------AAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDEL-NL 109

Query: 121 NVKSSILLLQDAA--PHL--QKGSSVVLISSIAGYQPQ-SSMAMYGVTKTALLGLTKALA 175
           N+ +++ L  D A  P +  +    ++ ++SI    P   S   Y   K AL   +K+L+
Sbjct: 110 NLLAAVRL--DRALLPGMIARGSGVIIHVTSIQRRLPLPESTTAYAAAKAALSTYSKSLS 167

Query: 176 AEMAPD-TRVNCVAPGFVPT----HFAEYITSNDGV 206
            E+AP   RVN V+PG++ T      AE +    G 
Sbjct: 168 KEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGT 203

Length = 260

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score = 79.8 bits (197), Expect = 4e-18
 Identities = 62/193 (32%), Positives = 96/193 (49%), Gaps = 13/193 (6%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
           M   F GK A+VT + +GIG    + L   GA VV  SR Q ++D  V   +  GIE + 
Sbjct: 1   MELDFAGKRALVTGAGKGIGRATVKALAKAGARVVAVSRTQADLDSLVR--ECPGIEPVC 58

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSS 125
           V   +S+    +  +       G +D++V+NAA    +   L+  +   D+ +D+NV++ 
Sbjct: 59  V--DLSDWDATEEALG----SVGPVDLLVNNAAV-AILQPFLEVTKEAFDRSFDVNVRAV 111

Query: 126 ILLLQDAAPHL---QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-D 181
           I + Q  A  +       S+V +SS A  +  ++  +Y  TK AL  LTK +A E+ P  
Sbjct: 112 IHVSQIVARGMIARGVPGSIVNVSSQASQRALTNHTVYCSTKAALDMLTKVMALELGPHK 171

Query: 182 TRVNCVAPGFVPT 194
            RVN V P  V T
Sbjct: 172 IRVNSVNPTVVMT 184

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional

 Score = 79.8 bits (197), Expect = 5e-18
 Identities = 60/201 (29%), Positives = 91/201 (45%), Gaps = 5/201 (2%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI--EV 63
           M   FQ +  +VT    GIG G+A  L   GA+V++  R    +  A  +++A      V
Sbjct: 1   MQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAV 60

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVK 123
                 V++  Q    ++      G++  VV  A  + ++  I Q       +  D+NV 
Sbjct: 61  RYEPADVTDEDQVARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVN 120

Query: 124 SSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD 181
            ++ +L+ AA  L +  G S V ISSIA          YGVTK+A+  L K  A E+ P 
Sbjct: 121 GTMYVLKHAARELVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMKLAADELGPS 180

Query: 182 -TRVNCVAPGFVPTHFAEYIT 201
             RVN + PG + T     IT
Sbjct: 181 WVRVNSIRPGLIRTDLVAPIT 201

Length = 276

>gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional

 Score = 79.3 bits (195), Expect = 7e-18
 Identities = 54/193 (27%), Positives = 97/193 (50%), Gaps = 9/193 (4%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGVVC 68
            +GKVA+VT +++GIG  IA+RL  +GA V +    +++  +E V ++++ G     +  
Sbjct: 2   LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGA 61

Query: 69  HVSNGQQRKNLIN------QTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINV 122
           ++ +    + L +      Q      K D++++NA   P    I +T E   D++  +N 
Sbjct: 62  NLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGA-FIEETTEQFFDRMVSVNA 120

Query: 123 KSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEM-APD 181
           K+   ++Q A   L+  S ++ ISS A          Y +TK A+  +T  LA ++ A  
Sbjct: 121 KAPFFIIQQALSRLRDNSRIINISSAATRISLPDFIAYSMTKGAINTMTFTLAKQLGARG 180

Query: 182 TRVNCVAPGFVPT 194
             VN + PGF+ T
Sbjct: 181 ITVNAILPGFIKT 193

Length = 252

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score = 81.4 bits (201), Expect = 8e-18
 Identities = 52/199 (26%), Positives = 80/199 (40%), Gaps = 9/199 (4%)

Query: 1   MEKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN---VDEAVVKLK 57
           + +M   K    +VA VT    GIG   A RL  EGA VV++    +    V   +    
Sbjct: 403 LRRMPKEKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQF 462

Query: 58  ARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKL 117
             G   + +   V++ Q  K         +G +D+VV+NA    S     +T        
Sbjct: 463 GAGR-AVALKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGIATSSP-FEETTLQEWQLN 520

Query: 118 WDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKAL 174
            DI      L+ ++A   +++   G ++V I+S        + + Y   K A   L + L
Sbjct: 521 LDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNASAYSAAKAAEAHLARCL 580

Query: 175 AAEMAP-DTRVNCVAPGFV 192
           AAE      RVN V P  V
Sbjct: 581 AAEGGTYGIRVNTVNPDAV 599

Length = 676

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 78.9 bits (195), Expect = 8e-18
 Identities = 45/197 (22%), Positives = 90/197 (45%), Gaps = 4/197 (2%)

Query: 15  AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQ 74
            ++T ++ GIG  +A      G +V +++R+   +DE   +L      V   +  V++ +
Sbjct: 1   VLITGASSGIGRALAREFAKAGYNVALAARRTDRLDELKAELLNPNPSVEVEILDVTDEE 60

Query: 75  QRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAP 134
           + + +I +   + G +D+V+ NA       S+         +  D N+  +  +L+ A P
Sbjct: 61  RNQLVIAELEAELGGLDLVIINAGVGKG-TSLGDLSFKAFRETIDTNLLGAAAILEAALP 119

Query: 135 HLQKGSS--VVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGF 191
             +      +VLISS+A  +     A Y  +K AL  L ++L  ++     RV  + PGF
Sbjct: 120 QFRAKGRGHLVLISSVAALRGLPGAAAYSASKAALSSLAESLRYDVKKRGIRVTVINPGF 179

Query: 192 VPTHFAEYITSNDGVVS 208
           + T     + +   ++S
Sbjct: 180 IDTPLTANMFTMPFLMS 196

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 78.9 bits (195), Expect = 9e-18
 Identities = 46/188 (24%), Positives = 90/188 (47%), Gaps = 4/188 (2%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCHVS 71
           K  ++T ++ GIG   A R    GA ++++ R+ + + E   +L A+  ++V+ +   VS
Sbjct: 1   KTVLITGASSGIGEATARRFAKAGAKLILTGRRAERLQELADELGAKFPVKVLPLQLDVS 60

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQD 131
           + +  +  +    E+F  ID++V+NA     +D   +      + + D NVK  + + + 
Sbjct: 61  DRESIEAALENLPEEFRDIDILVNNAGLALGLDPAQEADLEDWETMIDTNVKGLLNVTRL 120

Query: 132 AAPHLQKGSS--VVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVA 188
             P +   +   ++ + SIAG  P +   +Y  TK A+   +  L  ++     RV  + 
Sbjct: 121 ILPIMIARNQGHIINLGSIAGRYPYAGGNVYCATKAAVRQFSLNLRKDLIGTGIRVTNIE 180

Query: 189 PGFVPTHF 196
           PG V T F
Sbjct: 181 PGLVETEF 188

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score = 79.0 bits (195), Expect = 1e-17
 Identities = 52/193 (26%), Positives = 91/193 (47%), Gaps = 18/193 (9%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
           G+ A+VT S+QGIG+ +AE L   GA V+++ R    +  A   LK +G+    +   V+
Sbjct: 10  GRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVT 69

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTK-------ESVLDKLWDINVKS 124
           +    +  I+    + G ID++V+NA         +Q +           ++L   N+ S
Sbjct: 70  DHDAVRAAIDAFEAEIGPIDILVNNAG--------MQFRTPLEDFPADAFERLLRTNISS 121

Query: 125 SILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-D 181
              + Q  A H+       ++ I+S+     +  +A Y  TK A+  LTK +A + A   
Sbjct: 122 VFYVGQAVARHMIARGAGKIINIASVQSALARPGIAPYTATKGAVGNLTKGMATDWAKHG 181

Query: 182 TRVNCVAPGFVPT 194
            + N +APG+  T
Sbjct: 182 LQCNAIAPGYFDT 194

Length = 255

>gnl|CDD|235608 PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 78.3 bits (193), Expect = 1e-17
 Identities = 51/192 (26%), Positives = 91/192 (47%), Gaps = 10/192 (5%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
           R +GK   +   ++G+G+ +A     EGA V ++SR +  +      L   G  +  VV 
Sbjct: 2   RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYG-NIHYVVG 60

Query: 69  HVSNGQQRKNLINQTIEKFGKID--VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSI 126
            VS+ +  +N+I +  +    ID  VV        +V+       S L+++   ++K  +
Sbjct: 61  DVSSTESARNVIEKAAKVLNAIDGLVVTVGGYVEDTVEEF-----SGLEEMLTNHIKIPL 115

Query: 127 LLLQDAAPHLQKGSSVVLISSIAG-YQPQSSMAMYGVTKTALLGLTKALAAE-MAPDTRV 184
             +  +   L++GSS+VL+SS++G Y+       Y V K  L    + LA+E +    RV
Sbjct: 116 YAVNASLRFLKEGSSIVLVSSMSGIYKASPDQLSYAVAKAGLAKAVEILASELLGRGIRV 175

Query: 185 NCVAPGFVPTHF 196
           N +AP  +   F
Sbjct: 176 NGIAPTTISGDF 187

Length = 238

>gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 77.9 bits (192), Expect = 2e-17
 Identities = 60/204 (29%), Positives = 93/204 (45%), Gaps = 21/204 (10%)

Query: 8   KRFQGKVAIVTAST--QGIGFGIAERLGLEGASVVVS--SRKQKNVDEAVVK----LKAR 59
            + + KVA+VT  +   GIG  I + L   GA +  +  +   K +   V +        
Sbjct: 2   NQLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQE 61

Query: 60  GIEVIGVVCH-----VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVL 114
            +   GV        ++     K L+N+  E+ G   ++V+NAA + + D    T E  L
Sbjct: 62  ELLKNGVKVSSMELDLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEE-L 120

Query: 115 DKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMA---MYGVTKTALLGLT 171
           DK + +NV+++ LL    A    K S   +I+  +G Q Q  M     Y  TK A+  LT
Sbjct: 121 DKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSG-QFQGPMVGELAYAATKGAIDALT 179

Query: 172 KALAAEMAP-DTRVNCVAPGFVPT 194
            +LAAE+A     VN + PG  PT
Sbjct: 180 SSLAAEVAHLGITVNAINPG--PT 201

Length = 256

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 77.0 bits (190), Expect = 3e-17
 Identities = 55/194 (28%), Positives = 91/194 (46%), Gaps = 6/194 (3%)

Query: 14  VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNG 73
           V ++T ++ GIG   A      GA VV+++R  + + E   +++  G E I VV  V++ 
Sbjct: 2   VVVITGASSGIGRATALAFAERGAKVVLAARSAEALHELAREVRELGGEAIAVVADVADA 61

Query: 74  QQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAA 133
            Q +   +  +E+FG+ID  V+NA                  +++D+N    +     A 
Sbjct: 62  AQVERAADTAVERFGRIDTWVNNAGVA-VFGRFEDVTPEEFRRVFDVNYLGHVYGTLAAL 120

Query: 134 PHLQKGSSVVLI--SSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTR---VNCVA 188
           PHL++     LI   S+ GY+     A Y  +K A+ G T++L AE+A D     V  V 
Sbjct: 121 PHLRRRGGGALINVGSLLGYRSAPLQAAYSASKHAVRGFTESLRAELAHDGAPISVTLVQ 180

Query: 189 PGFVPTHFAEYITS 202
           P  + T F  +  S
Sbjct: 181 PTAMNTPFFGHARS 194

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score = 77.1 bits (190), Expect = 4e-17
 Identities = 54/179 (30%), Positives = 87/179 (48%), Gaps = 11/179 (6%)

Query: 15  AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQ 74
            IVT + QGIG  +A  L   GA+V+        +D   V L   G  +      V++  
Sbjct: 1   VIVTGAAQGIGRAVARHLLQAGATVI-------ALDLPFVLLLEYGDPLRLTPLDVADAA 53

Query: 75  QRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAP 134
             + + ++ + + G ID +V N A      +         ++ + +NV     LLQ  AP
Sbjct: 54  AVREVCSRLLAEHGPIDALV-NCAGVLRPGATDPLSTEDWEQTFAVNVTGVFNLLQAVAP 112

Query: 135 HL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPG 190
           H+  ++  ++V ++S A + P+ SMA YG +K AL  L+K L  E+AP   R N V+PG
Sbjct: 113 HMKDRRTGAIVTVASNAAHVPRISMAAYGASKAALASLSKCLGLELAPYGVRCNVVSPG 171

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 76.7 bits (189), Expect = 5e-17
 Identities = 53/193 (27%), Positives = 87/193 (45%), Gaps = 11/193 (5%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
            + K  +VT + +GIG    E L   GA  V  + R   +    V K   +   V+ +  
Sbjct: 1   IKDKTVLVTGANRGIGKAFVESLLAHGAKKVYAAVRDPGSAAHLVAKYGDK---VVPLRL 57

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
            V++ +  K    Q  +    +DVV++NA        + +     L +  D+NV   + L
Sbjct: 58  DVTDPESIKAAAAQAKD----VDVVINNAGVLKPATLLEEGALEALKQEMDVNVFGLLRL 113

Query: 129 LQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVN 185
            Q  AP L+   G ++V ++S+A  +   +M  Y  +K+A   LT+ L AE+A   T V 
Sbjct: 114 AQAFAPVLKANGGGAIVNLNSVASLKNFPAMGTYSASKSAAYSLTQGLRAELAAQGTLVL 173

Query: 186 CVAPGFVPTHFAE 198
            V PG + T  A 
Sbjct: 174 SVHPGPIDTRMAA 186

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score = 76.8 bits (189), Expect = 5e-17
 Identities = 51/194 (26%), Positives = 89/194 (45%), Gaps = 5/194 (2%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLK--ARGIEVIGVV 67
           F+ KV ++T    G+G   A RL  EGA + +    ++ ++ A   L   A   EV+ + 
Sbjct: 1   FKDKVVLITGGGSGLGLATAVRLAKEGAKLSLVDLNEEGLEAAKAALLEIAPDAEVLLIK 60

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
             VS+  Q +  ++ T+E+FG+ID   +NA      +          DK+  IN++    
Sbjct: 61  ADVSDEAQVEAYVDATVEQFGRIDGFFNNAGIEGKQNLTEDFGADEFDKVVSINLRGVFY 120

Query: 128 LLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRV 184
            L+     +  Q    +V  +S+ G +   + + Y   K  ++GLT+  A E      R+
Sbjct: 121 GLEKVLKVMREQGSGMIVNTASVGGIRGVGNQSGYAAAKHGVVGLTRNSAVEYGQYGIRI 180

Query: 185 NCVAPGFVPTHFAE 198
           N +APG + T   E
Sbjct: 181 NAIAPGAILTPMVE 194

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score = 76.9 bits (190), Expect = 7e-17
 Identities = 50/205 (24%), Positives = 88/205 (42%), Gaps = 28/205 (13%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG----IEVIGVV 67
           GKV ++T +  GIG   A  L   GA V+++ R ++  +EA  ++K       +EVI   
Sbjct: 1   GKVVVITGANSGIGKETARELAKRGAHVIIACRNEEKGEEAAAEIKKETGNAKVEVI--Q 58

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
             +S+    +    + + +F ++D++++NA        +  TK+   +  + +N     L
Sbjct: 59  LDLSSLASVRQFAEEFLARFPRLDILINNAGIMAPPRRL--TKDG-FELQFAVNYLGHFL 115

Query: 128 LLQDAAPHLQKGSS--VVLISSIAGYQPQSSMAM--------------YGVTKTALLGLT 171
           L     P L+  +   +V +SSIA                        YG +K A +  T
Sbjct: 116 LTNLLLPVLKASAPSRIVNVSSIAHRAGPIDFNDLDLENNKEYSPYKAYGQSKLANILFT 175

Query: 172 KALAAEMAPD--TRVNCVAPGFVPT 194
           + LA  +     T VN + PG V T
Sbjct: 176 RELARRLEGTGVT-VNALHPGVVRT 199

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs

 Score = 76.3 bits (188), Expect = 9e-17
 Identities = 61/197 (30%), Positives = 105/197 (53%), Gaps = 18/197 (9%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVV-KLKARGIEVIGVVCHV 70
           GK+A+VT +++GIG GIA +LG  GA+V ++ R           +++ARG + I V C  
Sbjct: 3   GKIALVTGASRGIGRGIALQLGEAGATVYITGRTILPQLPGTAEEIEARGGKCIPVRCDH 62

Query: 71  SNGQQRKNLINQT-IEKFGKIDVVVSNAAANPSVDSIL--------QTKESVLDKLWDIN 121
           S+  + + L  +   E+ G++D++V+NA A  +V  IL        +   ++ D + ++ 
Sbjct: 63  SDDDEVEALFERVAREQQGRLDILVNNAYA--AVQLILVGVAKPFWEEPPTIWDDINNVG 120

Query: 122 VKSSILLLQDAAPHLQKGSS--VVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMA 179
           +++       AAP + K     +V+ISS  G +   ++A YGV K A+  +   +A E+ 
Sbjct: 121 LRAHYACSVYAAPLMVKAGKGLIVIISSTGGLEYLFNVA-YGVGKAAIDRMAADMAHELK 179

Query: 180 PDTRVNCVA--PGFVPT 194
           P   V  V+  PGFV T
Sbjct: 180 PHG-VAVVSLWPGFVRT 195

This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 75.8 bits (187), Expect = 9e-17
 Identities = 47/188 (25%), Positives = 83/188 (44%), Gaps = 10/188 (5%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
             A++T ++ GIG   A      G  + + +R Q  ++    +L++ G++       +SN
Sbjct: 7   PRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSN 66

Query: 73  GQQRKNLINQTIEKFGKIDVVVSNAAA---NPSVDSILQTKESVLDKLWDINVKSSILLL 129
            +     I + +E+FG  DV+++NA      P ++  L   + V+     +N+ S     
Sbjct: 67  PEAIAPGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVI----QLNLTSVFQCC 122

Query: 130 QDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAE-MAPDTRVNC 186
               P +  + G  ++ +SSIA          Y V+K AL   TK LA E  +   RV  
Sbjct: 123 SAVLPGMRARGGGLIINVSSIAARNAFPQWGAYCVSKAALAAFTKCLAEEERSHGIRVCT 182

Query: 187 VAPGFVPT 194
           +  G V T
Sbjct: 183 ITLGAVNT 190

Length = 241

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score = 75.4 bits (186), Expect = 2e-16
 Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 18/193 (9%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
           G VA+VT    G+G    ERL  +GA VV+         E V KL   G     V   V+
Sbjct: 2   GLVAVVTGGASGLGLATVERLLAQGAKVVILDLPNSPG-ETVAKL---GDNCRFVPVDVT 57

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESV-----LDKLWDINVKSSI 126
           + +  K  +     KFG++D+VV+ A    +  +  +  +         ++ ++N+  + 
Sbjct: 58  SEKDVKAALALAKAKFGRLDIVVNCAGIAVAAKTYNKKGQQPHSLELFQRVINVNLIGTF 117

Query: 127 LLLQDAAPHLQKGSS--------VVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEM 178
            +++ AA  + K           ++  +S+A ++ Q   A Y  +K  ++G+T  +A ++
Sbjct: 118 NVIRLAAGAMGKNEPDQGGERGVIINTASVAAFEGQIGQAAYSASKGGIVGMTLPIARDL 177

Query: 179 APD-TRVNCVAPG 190
           AP   RV  +APG
Sbjct: 178 APQGIRVVTIAPG 190

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 74.6 bits (184), Expect = 2e-16
 Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 23/215 (10%)

Query: 15  AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQ 74
            ++T +++GIG  +  +L   G + V+++ +  +    +  L A    +  +   V++  
Sbjct: 1   VLITGASRGIGLELVRQLLARGNNTVIATCRDPSAATELAALGASHSRLHILELDVTD-- 58

Query: 75  QRKNLINQTIE------KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
                I ++ E          +DV+++NA    S     +     L +++ +NV   +LL
Sbjct: 59  ----EIAESAEAVAERLGDAGLDVLINNAGILHSYGPASEVDSEDLLEVFQVNVLGPLLL 114

Query: 129 LQDAAPHLQKGSS--VVLISSIAG---YQPQSSMAMYGVTKTALLGLTKALAAEMAPDTR 183
            Q   P L KG+   ++ ISS  G            Y  +K AL  LTK+LA E+  D  
Sbjct: 115 TQAFLPLLLKGARAKIINISSRVGSIGDNTSGGWYSYRASKAALNMLTKSLAVELKRD-G 173

Query: 184 VNCVA--PGFVPTHFAEYITSNDG---VVSSVSSL 213
           +  V+  PG+V T        N G      SV+ L
Sbjct: 174 ITVVSLHPGWVRTDMGGPFAKNKGPITPEESVAGL 208

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score = 74.4 bits (183), Expect = 4e-16
 Identities = 50/208 (24%), Positives = 98/208 (47%), Gaps = 12/208 (5%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV 63
           M       GK  ++T S QGIGF +A  L   GA ++++    +  + AV KL+  GI+ 
Sbjct: 1   MNDLFSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKA 60

Query: 64  IGVVCHVSNGQQRKNLINQTIEKF----GKIDVVVSNAAANPSVDSILQTKESVLDKLWD 119
                +V++ Q+    +   IE      G IDV+++NA          +  E   + +  
Sbjct: 61  HAAPFNVTHKQE----VEAAIEHIEKDIGPIDVLINNAGIQRR-HPFTEFPEQEWNDVIA 115

Query: 120 INVKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAE 177
           +N  +  L+ Q  A ++  ++   ++ I S+     + ++  Y  +K A+  LT+ +  E
Sbjct: 116 VNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDTITPYAASKGAVKMLTRGMCVE 175

Query: 178 MAP-DTRVNCVAPGFVPTHFAEYITSND 204
           +A  + +VN +APG+  T   + +  ++
Sbjct: 176 LARHNIQVNGIAPGYFKTEMTKALVEDE 203

Length = 254

>gnl|CDD|183716 PRK12744, PRK12744, short chain dehydrogenase; Provisional

 Score = 74.4 bits (183), Expect = 4e-16
 Identities = 51/220 (23%), Positives = 95/220 (43%), Gaps = 10/220 (4%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVV----SSRKQKNVDEAVVKLKARGIEVIGV 66
           +GKV ++    + +G  IA  L  +GA  V     S+  + + +E V  +KA G + +  
Sbjct: 7   KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAF 66

Query: 67  VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSI 126
              ++     + L +     FG+ D+ + N         I++  E+  D+++ +N KS+ 
Sbjct: 67  QADLTTAAAVEKLFDDAKAAFGRPDIAI-NTVGKVLKKPIVEISEAEYDEMFAVNSKSAF 125

Query: 127 LLLQDAAPHLQKGSSVVLI--SSIAGYQPQSSMAMYGVTKTALLGLTKALAAE-MAPDTR 183
             +++A  HL     +V +  S +  + P    + Y  +K  +   T+A + E  A    
Sbjct: 126 FFIKEAGRHLNDNGKIVTLVTSLLGAFTP--FYSAYAGSKAPVEHFTRAASKEFGARGIS 183

Query: 184 VNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTL 223
           V  V PG + T F       + V    ++  LSP S   L
Sbjct: 184 VTAVGPGPMDTPFFYPQEGAEAVAYHKTAAALSPFSKTGL 223

Length = 257

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score = 72.8 bits (179), Expect = 1e-15
 Identities = 58/227 (25%), Positives = 102/227 (44%), Gaps = 23/227 (10%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK-LKARGIEVIGVVCHVS 71
           ++A+VT    GIG  I +RL  +G  V  +    +   EA ++   A G +   V   VS
Sbjct: 1   RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVS 60

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKL----W----DINVK 123
           + +  K  + +   + G IDV+V+NA           T+++   K+    W    D N+ 
Sbjct: 61  SFESCKAAVAKVEAELGPIDVLVNNAGI---------TRDATFKKMTYEQWSAVIDTNLN 111

Query: 124 SSILLLQDAAPHLQKGSS--VVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP- 180
           S   + Q     +++     ++ ISS+ G + Q     Y   K  ++G TKALA E A  
Sbjct: 112 SVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGMIGFTKALAQEGATK 171

Query: 181 DTRVNCVAPGFVPTHFAEYITSN--DGVVSSVSSLKLSPPSSLTLAV 225
              VN ++PG++ T     +  +  + +V+ +   +L  P  +  AV
Sbjct: 172 GVTVNTISPGYIATDMVMAMREDVLNSIVAQIPVGRLGRPEEIAAAV 218

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 72.8 bits (179), Expect = 1e-15
 Identities = 52/199 (26%), Positives = 89/199 (44%), Gaps = 26/199 (13%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
           +  G   ++T    GIG  +A+R    G +V++  R ++ + EA    KA   E+   VC
Sbjct: 2   KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEA----KAENPEIHTEVC 57

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNA---------AANPSVDSILQTKESVLDKLWD 119
            V++   R+ L+    +++  ++V+++NA          A   +D   Q           
Sbjct: 58  DVADRDSRRELVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQE--------IA 109

Query: 120 INVKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAE 177
            N+ + I L     PHL  Q  ++++ +SS   + P +S  +Y  TK A+   T AL  E
Sbjct: 110 TNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPVYCATKAAIHSYTLAL-RE 168

Query: 178 MAPDTRVNC--VAPGFVPT 194
              DT V    +AP  V T
Sbjct: 169 QLKDTSVEVIELAPPLVDT 187

Length = 245

>gnl|CDD|212497 cd11731, Lin1944_like_SDR_c, Lin1944 and related proteins, classical (c) SDRs

 Score = 71.8 bits (177), Expect = 1e-15
 Identities = 45/182 (24%), Positives = 64/182 (35%), Gaps = 30/182 (16%)

Query: 15  AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQ 74
            IV  +T  IG  +A+ L   G  V+ + R                         +++  
Sbjct: 1   IIVIGATGTIGLAVAQLLSAHGHEVITAGRSSG-----------------DYQVDITDEA 43

Query: 75  QRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKE----SVLDKLWDINVKSSILLLQ 130
             K L     EK G  D +VS A           T       +  KL        I L++
Sbjct: 44  SIKALF----EKVGHFDAIVSTAGDAEFAPLAELTDADFQRGLNSKLL-----GQINLVR 94

Query: 131 DAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPG 190
              P+L  G S+ L S I   +P    A       AL G  +A A E+    R+N V+PG
Sbjct: 95  HGLPYLNDGGSITLTSGILAQRPIPGGAAAATVNGALEGFVRAAAIELPRGIRINAVSPG 154

Query: 191 FV 192
            V
Sbjct: 155 VV 156

Lin1944 protein from Listeria Innocua is a classical SDR, it contains a glycine-rich motif similar to the canonical motif of the SDR NAD(P)-binding site. However, the typical SDR active site residues are absent in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 198

>gnl|CDD|236389 PRK09134, PRK09134, short chain dehydrogenase; Provisional

 Score = 73.0 bits (180), Expect = 1e-15
 Identities = 47/190 (24%), Positives = 86/190 (45%), Gaps = 16/190 (8%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVV---SSRKQKNVDEAVVKLKARGIEVIGVVCH 69
           + A+VT + + IG  IA  L   G  V V    SR +   +    +++A G   + +   
Sbjct: 10  RAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDE--AEALAAEIRALGRRAVALQAD 67

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSV---DSILQTKESVLDKLWDINVKSSI 126
           +++  + + L+ +     G I ++V+NA    S+   DS      +  D+    N+++  
Sbjct: 68  LADEAEVRALVARASAALGPITLLVNNA----SLFEYDSAASFTRASWDRHMATNLRAPF 123

Query: 127 LLLQDAAPHLQKGSSVVLISSIAG--YQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRV 184
           +L Q  A  L   +  ++++ I    +        Y ++K AL   T+ LA  +AP  RV
Sbjct: 124 VLAQAFARALPADARGLVVNMIDQRVWNLNPDFLSYTLSKAALWTATRTLAQALAPRIRV 183

Query: 185 NCVAPGFVPT 194
           N + PG  PT
Sbjct: 184 NAIGPG--PT 191

Length = 258

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score = 72.8 bits (179), Expect = 2e-15
 Identities = 58/190 (30%), Positives = 99/190 (52%), Gaps = 18/190 (9%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
            KV I+T  + G+G  +A+R   EGA+VV++ R ++ ++EA ++++    +V+ V   V 
Sbjct: 1   EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVR 60

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAAAN---PSVDSILQTKESVLDKLWDINVKSSILL 128
           N +  + ++ Q  EKFG+ID +++NAA N   P+ D  +    SV+    DI +  +   
Sbjct: 61  NPEDVQKMVEQIDEKFGRIDALINNAAGNFICPAEDLSVNGWNSVI----DIVLNGTFYC 116

Query: 129 LQDAAPH-LQKGSSVVLISSIAGYQPQSSMAMYGV-----TKTALLGLTKALAAEMAPD- 181
            Q    + ++KG    +I+ +A Y      A  GV      K  +L +T+ LA E     
Sbjct: 117 SQAVGKYWIEKGIKGNIINMVATYAWD---AGPGVIHSAAAKAGVLAMTRTLAVEWGRKY 173

Query: 182 -TRVNCVAPG 190
             RVN +APG
Sbjct: 174 GIRVNAIAPG 183

Length = 252

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score = 72.4 bits (177), Expect = 2e-15
 Identities = 56/195 (28%), Positives = 98/195 (50%), Gaps = 9/195 (4%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGV 66
           K   GKVA+VT +++GIG  IA RL  +GA V +   R ++  DE + ++++ G +   +
Sbjct: 2   KNLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLI 61

Query: 67  VCHVSNGQQRKNLINQTIEKF------GKIDVVVSNAAANPSVDSILQTKESVLDKLWDI 120
              +++    K L+ Q   +        +ID++V+NA    +  +I  T E + D++  +
Sbjct: 62  EADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIG-TQGTIENTTEEIFDEIMAV 120

Query: 121 NVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP 180
           N+K+   L+Q   P L+    V+ ISS       +    YG++K AL  +T  LA  +  
Sbjct: 121 NIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGFTGSIAYGLSKGALNTMTLPLAKHLGE 180

Query: 181 -DTRVNCVAPGFVPT 194
               VN + PG+  T
Sbjct: 181 RGITVNTIMPGYTKT 195

Length = 254

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 72.6 bits (179), Expect = 2e-15
 Identities = 44/187 (23%), Positives = 84/187 (44%), Gaps = 15/187 (8%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIE-VIGVVCH 69
             K  ++T  + G G  +A+     G  VV + R +     A    +A   +  +  +  
Sbjct: 3   SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSE----AARADFEALHPDRALARLLD 58

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLD---KLWDINVKSSI 126
           V++      ++      FG IDV+V+NA      +  ++  ES L    + +++NV  ++
Sbjct: 59  VTDFDAIDAVVADAEATFGPIDVLVNNAGY--GHEGAIE--ESPLAEMRRQFEVNVFGAV 114

Query: 127 LLLQDAAPHLQKGSS--VVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTR 183
            + +   P ++      +V I+S+ G      +  Y  +K AL G++++LA E+AP    
Sbjct: 115 AMTKAVLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSKFALEGISESLAKEVAPFGIH 174

Query: 184 VNCVAPG 190
           V  V PG
Sbjct: 175 VTAVEPG 181

Length = 277

>gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional

 Score = 71.3 bits (175), Expect = 4e-15
 Identities = 50/187 (26%), Positives = 90/187 (48%), Gaps = 11/187 (5%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
           F GK  +V   ++GIG  I  R   +GA+V  +    K+  E +   +  G   +     
Sbjct: 4   FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLA--QETGATAVQT--- 58

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLL 129
             +   R  +I   + K G +D++V NA      D++    + + D+L+ IN+ +     
Sbjct: 59  --DSADRDAVI-DVVRKSGALDILVVNAGIAVFGDALELDADDI-DRLFKINIHAPYHAS 114

Query: 130 QDAAPHLQKGSSVVLISSIAGYQ-PQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCV 187
            +AA  + +G  +++I S+ G + P + MA Y  +K+AL G+ + LA +  P    +N V
Sbjct: 115 VEAARQMPEGGRIIIIGSVNGDRMPVAGMAAYAASKSALQGMARGLARDFGPRGITINVV 174

Query: 188 APGFVPT 194
            PG + T
Sbjct: 175 QPGPIDT 181

Length = 237

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 70.9 bits (174), Expect = 9e-15
 Identities = 51/202 (25%), Positives = 104/202 (51%), Gaps = 12/202 (5%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV 63
           M  +   +GKVA+VT ++ G+G   A+ L   GA VV++SR+ + + E   +++A G   
Sbjct: 1   MGRSINLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAA 60

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVK 123
             V   V++ Q  K  +     + G ID++V+N+  + +   ++    +  D ++D N +
Sbjct: 61  HVVSLDVTDYQSIKAAVAHAETEAGTIDILVNNSGVS-TTQKLVDVTPADFDFVFDTNTR 119

Query: 124 SSILLLQDAA----------PHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKA 173
            +  + Q+ A           + + G  ++ I+S+AG +    + +Y ++K A++ +T+A
Sbjct: 120 GAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQIGLYCMSKAAVVHMTRA 179

Query: 174 LAAEMAP-DTRVNCVAPGFVPT 194
           +A E       VN + PG++ T
Sbjct: 180 MALEWGRHGINVNAICPGYIDT 201

Length = 258

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score = 70.8 bits (174), Expect = 1e-14
 Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 8/193 (4%)

Query: 17  VTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQR 76
           +T +  G+G  IA R   EG  + ++   ++  +E +  L+  G +     C V +  Q 
Sbjct: 5   ITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQL 64

Query: 77  KNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLW--DINVKSSILLLQDAAP 134
             L     EK+G IDV+V+NA    S     +   S+ D  W   IN+   +   +   P
Sbjct: 65  TALAQACEEKWGGIDVIVNNAGV-ASGGFFEE--LSLEDWDWQIAINLMGVVKGCKAFLP 121

Query: 135 HL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNCVAPGF 191
               QK   +V I+S+AG     +M+ Y V K  ++ L++ L  E+A D   V+ V P F
Sbjct: 122 LFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSF 181

Query: 192 VPTHFAEYITSND 204
             T+  +     +
Sbjct: 182 FQTNLLDSFRGPN 194

Length = 270

>gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 71.8 bits (177), Expect = 1e-14
 Identities = 63/208 (30%), Positives = 94/208 (45%), Gaps = 39/208 (18%)

Query: 7   AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGV 66
            +   GKVA+VT + +GIG  IAE L  +GA VV       +V  A   L A    V G 
Sbjct: 205 DRPLAGKVALVTGAARGIGAAIAEVLARDGAHVVCL-----DVPAAGEALAAVANRVGGT 259

Query: 67  -----VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVL----DKL 117
                +       +   +     E+ G +D+VV NA        I  T++  L    +  
Sbjct: 260 ALALDITAPDAPAR---IAEHLAERHGGLDIVVHNAG-------I--TRDKTLANMDEAR 307

Query: 118 WD--INVK-SSILLLQDA---APHLQKGSSVVLISS---IAGYQPQSSMAMYGVTKTALL 168
           WD  + V   + L + +A   A  L  G  +V +SS   IAG + Q++   Y  +K  ++
Sbjct: 308 WDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRGQTN---YAASKAGVI 364

Query: 169 GLTKALAAEMAP-DTRVNCVAPGFVPTH 195
           GL +ALA  +A     +N VAPGF+ T 
Sbjct: 365 GLVQALAPLLAERGITINAVAPGFIETQ 392

Length = 450

>gnl|CDD|187630 cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP) reductase (ENR), divergent SDR

 Score = 69.9 bits (172), Expect = 1e-14
 Identities = 51/190 (26%), Positives = 84/190 (44%), Gaps = 16/190 (8%)

Query: 12  GKVAIVT--ASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
           GK  ++T  A+ + I +GIA+ L   GA +  + + +          +  G   + + C 
Sbjct: 1   GKRILITGIANDRSIAWGIAKALHEAGAELAFTYQPEALRKRVEKLAERLGESALVLPCD 60

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSI---LQTKESVLDKLWDINVKSSI 126
           VSN ++ K L  +  + +GK+D +V + A  P V      L T      K  DI+  S +
Sbjct: 61  VSNDEEIKELFAEVKKDWGKLDGLVHSIAFAPKVQLKGPFLDTSRKGFLKALDISAYSLV 120

Query: 127 LLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMY-----GVTKTALLGLTKALAAEMAPD 181
            L + A P +  G S+V +S +      S   +      GV K AL    + LA E+   
Sbjct: 121 SLAKAALPIMNPGGSIVTLSYLG-----SERVVPGYNVMGVAKAALESSVRYLAYELGRK 175

Query: 182 -TRVNCVAPG 190
             RVN ++ G
Sbjct: 176 GIRVNAISAG 185

This bacterial subgroup of ENRs includes Escherichia coli ENR. ENR catalyzes the NAD(P)H-dependent reduction of enoyl-ACP in the last step of fatty acid biosynthesis. De novo fatty acid biosynthesis is catalyzed by the fatty acid synthetase complex, through the serial addition of 2-carbon subunits. In bacteria and plants,ENR catalyzes one of six synthetic steps in this process. Oilseed rape ENR, and also apparently the NADH-specific form of Escherichia coli ENR, is tetrameric. Although similar to the classical SDRs, this group does not have the canonical catalytic tetrad, nor does it have the typical Gly-rich NAD-binding pattern. Such so-called divergent SDRs have a GXXXXXSXA NAD-binding motif and a YXXMXXXK (or YXXXMXXXK) active site motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|235914 PRK07041, PRK07041, short chain dehydrogenase; Provisional

 Score = 69.3 bits (170), Expect = 2e-14
 Identities = 50/183 (27%), Positives = 75/183 (40%), Gaps = 17/183 (9%)

Query: 16  IVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQ 75
           +V   + GIG  +A     EGA V ++SR +  +  A   L      V      +++   
Sbjct: 1   LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGA-PVRTAALDITDEAA 59

Query: 76  RKNLINQTIEKFGKIDVVVSNAAANPS--VDSI-LQTKESVLD-KLWDINVKSSILLLQD 131
                 +     G  D VV  AA  P   V ++ L   ++ +D K W             
Sbjct: 60  VDAFFAEA----GPFDHVVITAADTPGGPVRALPLAAAQAAMDSKFWGA-------YRVA 108

Query: 132 AAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGF 191
            A  +  G S+  +S  A  +P +S  + G    AL  L + LA E+AP  RVN V+PG 
Sbjct: 109 RAARIAPGGSLTFVSGFAAVRPSASGVLQGAINAALEALARGLALELAP-VRVNTVSPGL 167

Query: 192 VPT 194
           V T
Sbjct: 168 VDT 170

Length = 230

>gnl|CDD|130890 TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-protein) reductase, putative

 Score = 69.2 bits (169), Expect = 2e-14
 Identities = 50/199 (25%), Positives = 93/199 (46%), Gaps = 20/199 (10%)

Query: 16  IVTASTQGIGFGIAERLGLEGASVVVSSRK-QKNVDEAVVKLKARGIEVIGVVCHVSNGQ 74
           +VT +++GIG  IA RL  +G  + V     + + +  V  ++A+G     +   V++  
Sbjct: 2   LVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRV 61

Query: 75  QRKNLINQTIEKFGKIDVVVSNA-----AANPSV-----DSILQTKESVLDKLWDINVKS 124
             + L+   I + G    VV NA     AA P++     D ++ T    LD  +++    
Sbjct: 62  ACRTLLEADIAEHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTN---LDGFYNVIHPC 118

Query: 125 SILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTR 183
           ++ +++      ++G  ++ ++S++G         Y   K  L+G TKALA E+A     
Sbjct: 119 TMPMIR-----ARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIGATKALAVELAKRKIT 173

Query: 184 VNCVAPGFVPTHFAEYITS 202
           VNC+APG + T     +  
Sbjct: 174 VNCIAPGLIDTEMLAEVEH 192

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional

 Score = 69.7 bits (171), Expect = 3e-14
 Identities = 63/220 (28%), Positives = 88/220 (40%), Gaps = 43/220 (19%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVV-------------SSRKQKNVDEAVVKLK 57
            G+V IVT +  GIG   A     EGA VVV              S  Q  VDE V    
Sbjct: 5   DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIV---- 60

Query: 58  ARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQ------TKE 111
           A G E +     +++     NL++  +E FG +DV+V+NA        IL+        E
Sbjct: 61  AAGGEAVANGDDIADWDGAANLVDAAVETFGGLDVLVNNAG-------ILRDRMIANMSE 113

Query: 112 SVLDKLWDINVKSSILLLQDAAPHLQKGS--------SVVLISSIAGYQPQSSMAMYGVT 163
              D +  +++K     L+ AA + +  S         ++  SS AG Q       Y   
Sbjct: 114 EEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGSVGQGNYSAA 173

Query: 164 KTALLGLTKALAAEMAP-DTRVNCVAP----GFVPTHFAE 198
           K  +  LT   AAE+      VN +AP        T FAE
Sbjct: 174 KAGIAALTLVAAAELGRYGVTVNAIAPAARTRMTETVFAE 213

Length = 286

>gnl|CDD|187595 cd05334, DHPR_SDR_c_like, dihydropteridine reductase (DHPR), classical (c) SDRs

 Score = 68.5 bits (168), Expect = 3e-14
 Identities = 44/190 (23%), Positives = 74/190 (38%), Gaps = 21/190 (11%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
            +V +V      +G  + +     G  V   S      +EA     A  I V+       
Sbjct: 1   ARVVLVYGGRGALGSAVVQAFKSRGWWVA--SIDLAENEEA----DAS-IIVLDSDSFT- 52

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAAA----NPSVDSILQTKESVLDKLWDINVKSSIL 127
             +Q K ++       GK+D ++  A      +    S ++      D +W  N+ +S +
Sbjct: 53  --EQAKQVVASVARLSGKVDALICVAGGWAGGSAKSKSFVKN----WDLMWKQNLWTSFI 106

Query: 128 LLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAE---MAPDTRV 184
               A  HL  G  +VL  + A  +P   M  YG  K A+  LT++LAAE   +   +  
Sbjct: 107 ASHLATKHLLSGGLLVLTGAKAALEPTPGMIGYGAAKAAVHQLTQSLAAENSGLPAGSTA 166

Query: 185 NCVAPGFVPT 194
           N + P  + T
Sbjct: 167 NAILPVTLDT 176

Dihydropteridine reductase is an NAD-binding protein related to the SDRs. It converts dihydrobiopterin into tetrahydrobiopterin, a cofactor necessary in catecholamines synthesis. Dihydropteridine reductase has the YXXXK of these tyrosine-dependent oxidoreductases, but lacks the typical upstream Asn and Ser catalytic residues. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 221

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 68.8 bits (168), Expect = 3e-14
 Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 6/190 (3%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG---IEVIGVV 67
             ++ +VT ++ GIG   A      GA+V++  R ++ + +    +   G    +   + 
Sbjct: 3   NDRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINEEGGRQPQWFILD 62

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
                 +  + L  +    + ++D V+ NA     V  + +    V   +  +NV ++ +
Sbjct: 63  LLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPLSEQNPQVWQDVXQVNVNATFM 122

Query: 128 LLQDAAPHLQKG--SSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRV 184
           L Q   P L K    S+V  SS  G Q +++   Y V+K A  GL + LA E    + RV
Sbjct: 123 LTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAVSKFATEGLXQVLADEYQQRNLRV 182

Query: 185 NCVAPGFVPT 194
           NC+ PG   T
Sbjct: 183 NCINPGGTRT 192

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score = 69.0 bits (169), Expect = 4e-14
 Identities = 55/192 (28%), Positives = 91/192 (47%), Gaps = 17/192 (8%)

Query: 15  AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVI-------GVV 67
           A +T +  G+G  IA R+  +GA V ++       D A +   A  I            V
Sbjct: 2   AFITGAAGGLGRAIARRMAEQGAKVFLTD----INDAAGLDAFAAEINAAHGEGVAFAAV 57

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
             V++  Q + L+ Q  +  G + V+V+NA    S  +I Q +     ++  INV+S  L
Sbjct: 58  QDVTDEAQWQALLAQAADAMGGLSVLVNNAGVG-SFGAIEQIELDEWRRVMAINVESIFL 116

Query: 128 LLQDAAPHLQKG--SSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALA---AEMAPDT 182
             + A P+L+    +S+V ISS+A ++ +     Y  +K A+  LTK++A   A    D 
Sbjct: 117 GCKHALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAVASLTKSIALDCARRGLDV 176

Query: 183 RVNCVAPGFVPT 194
           R N + P F+ T
Sbjct: 177 RCNSIHPTFIRT 188

Length = 251

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 68.6 bits (168), Expect = 5e-14
 Identities = 59/199 (29%), Positives = 93/199 (46%), Gaps = 11/199 (5%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           +  +VT  ++G+G  IA     EGA VVV+  + ++  EA+      G   I +   V++
Sbjct: 6   QTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALA--DELGDRAIALQADVTD 63

Query: 73  GQQRKNLINQTIEKFGK-IDVVVSNAAANPSVDSILQTKESVLD-----KLWDINVKSSI 126
            +Q + +     E FGK I  VV+NA A+ S D   + K   +      +  + +VK ++
Sbjct: 64  REQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGAL 123

Query: 127 LLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TR 183
             +Q A P +  Q    ++ I +     P      Y   K ALLGLT+ LAAE+ P    
Sbjct: 124 NTIQAALPGMREQGFGRIINIGTNLFQNPVVPYHDYTTAKAALLGLTRNLAAELGPYGIT 183

Query: 184 VNCVAPGFVPTHFAEYITS 202
           VN V+ G + T  A   T 
Sbjct: 184 VNMVSGGLLRTTDASAATP 202

Length = 253

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score = 68.3 bits (167), Expect = 6e-14
 Identities = 52/190 (27%), Positives = 93/190 (48%), Gaps = 8/190 (4%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVV-KLKARGIEVIGVVCHVS 71
           KV I+T +++GIG   A      G +V ++  + ++  EAVV  ++ +G E + V   V+
Sbjct: 3   KVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVA 62

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQD 131
           +      L      + G++D +V+NA    +   + Q   + L +++  NV  S L  ++
Sbjct: 63  DEADVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCARE 122

Query: 132 AAP-----HLQKGSSVVLISSIAGYQPQSSMAM-YGVTKTALLGLTKALAAEMAPD-TRV 184
           A       H  +G ++V +SS+A         + Y  +K A+  +T  LA E+A +  RV
Sbjct: 123 AVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAASKGAIDTMTIGLAKEVAAEGIRV 182

Query: 185 NCVAPGFVPT 194
           N V PG + T
Sbjct: 183 NAVRPGVIYT 192

Length = 248

>gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 68.2 bits (167), Expect = 7e-14
 Identities = 49/192 (25%), Positives = 88/192 (45%), Gaps = 30/192 (15%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLK------ARGIEV 63
             GK   +T +++GIG  IA +   +GA+VV++++      E   KL       A  IE 
Sbjct: 1   LAGKTLFITGASRGIGKAIALKAARDGANVVIAAKTA----EPHPKLPGTIYTAAEEIEA 56

Query: 64  IG-----VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLW 118
            G      +  + +  Q +  + + +EKFG ID++V+NA+A  S+   L T     D + 
Sbjct: 57  AGGKALPCIVDIRDEDQVRAAVEKAVEKFGGIDILVNNASA-ISLTGTLDTPMKRYDLMM 115

Query: 119 DINVKSSILLLQDAAPHLQKGSS--VVLISSIAGYQPQ-------SSMAMYGVTKTALLG 169
            +N + + L  +   P+L+K  +  ++ +S      P+        +MA YG++   L  
Sbjct: 116 GVNTRGTYLCSKACLPYLKKSKNPHILNLSPPLNLNPKWFKNHTAYTMAKYGMSMCVL-- 173

Query: 170 LTKALAAEMAPD 181
               +A E  P 
Sbjct: 174 ---GMAEEFKPG 182

This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional

 Score = 69.0 bits (169), Expect = 7e-14
 Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 23/210 (10%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
           M     G V ++T ++ GIG   AE     GA +V+++R ++ +     + +A G EV+ 
Sbjct: 1   MMGPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLV 60

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNA---AANPSVDSILQTKESVLDKLWDINV 122
           V   V++  Q K L  Q     G+IDV V+N    A     ++ ++  E V        +
Sbjct: 61  VPTDVTDADQVKALATQAASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQV--------I 112

Query: 123 KSSIL-LLQDA---APHLQKGSSVVLIS--SIAGYQPQSSMAMYGVTKTALLGLTKALAA 176
           +++++  ++DA    P  +K    + I+  S+ G+  Q   A Y  +K  L G ++AL  
Sbjct: 113 QTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSASKFGLRGFSEALRG 172

Query: 177 EMA--PDTRVNCVAPGFVPT----HFAEYI 200
           E+A  PD  V  V P F+ T    H A Y 
Sbjct: 173 ELADHPDIHVCDVYPAFMDTPGFRHGANYT 202

Length = 330

>gnl|CDD|187619 cd05361, haloalcohol_DH_SDR_c-like, haloalcohol dehalogenase, classical (c) SDRs

 Score = 68.0 bits (166), Expect = 9e-14
 Identities = 49/188 (26%), Positives = 87/188 (46%), Gaps = 11/188 (5%)

Query: 14  VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNG 73
           +A+VT +    G   AE L  +G +VV       +  E     +A   E  G      + 
Sbjct: 3   IALVTHARHFAGPASAEALTEDGYTVVCHDASFADAAE----RQAFESENPGTK--ALSE 56

Query: 74  QQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAA 133
           Q+ + L++  ++  G IDV+VSN      ++ I  T E+ + + ++        LLQ A 
Sbjct: 57  QKPEELVDAVLQAGGAIDVLVSNDYIPRPMNPIDGTSEADIRQAFEALSIFPFALLQAAI 116

Query: 134 PHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RVNCVAPG 190
             +    G S++ I+S    +P +  ++YG  + A + L ++LA E++ D   V  + P 
Sbjct: 117 AQMKKAGGGSIIFITSAVPKKPLAYNSLYGPARAAAVALAESLAKELSRDNILVYAIGPN 176

Query: 191 FV--PTHF 196
           F   PT+F
Sbjct: 177 FFNSPTYF 184

Dehalogenases cleave carbon-halogen bonds. Haloalcohol dehalogenase show low sequence similarity to short-chain dehydrogenases/reductases (SDRs). Like the SDRs, haloalcohol dehalogenases have a conserved catalytic triad (Ser-Tyr-Lys/Arg), and form a Rossmann fold. However, the normal classical SDR NAD(P)-binding motif (TGXXGXG) and NAD-binding function is replaced with a halide binding site, allowing the enzyme to catalyze a dehalogenation reaction. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score = 67.6 bits (165), Expect = 1e-13
 Identities = 48/198 (24%), Positives = 83/198 (41%), Gaps = 4/198 (2%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHV 70
           + K AIVT    GIG     R   EGA V V    ++  ++    ++A+G       C +
Sbjct: 2   KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDI 61

Query: 71  SNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQ 130
           ++       +    +  G +DV+V+NA  +       +T+  + ++L  IN+  ++ +  
Sbjct: 62  TDRDSVDTAVAAAEQALGPVDVLVNNAGWD-KFGPFTKTEPPLWERLIAINLTGALHMHH 120

Query: 131 DAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMA-PDTRVNCV 187
              P +  +    +V I+S A     S  A+Y   K  L+  +K +A E A     VN V
Sbjct: 121 AVLPGMVERGAGRIVNIASDAARVGSSGEAVYAACKGGLVAFSKTMAREHARHGITVNVV 180

Query: 188 APGFVPTHFAEYITSNDG 205
            PG   T   + I     
Sbjct: 181 CPGPTDTALLDDICGGAE 198

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score = 67.5 bits (165), Expect = 1e-13
 Identities = 48/185 (25%), Positives = 77/185 (41%), Gaps = 7/185 (3%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           + A+VT +  GIG  +A R    G  V+        +      L       + V C +++
Sbjct: 3   RTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDAR--FVPVACDLTD 60

Query: 73  GQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDA 132
                  +     + G +DV+V+NA A  +  S+  T  +       +N++++ L ++  
Sbjct: 61  AASLAAALANAAAERGPVDVLVANAGAARAA-SLHDTTPASWRADNALNLEAAYLCVEAV 119

Query: 133 APHLQKGS--SVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNCVAP 189
              + K S  +VV I S+ G       A Y   K  L+  TK LA E      R N VAP
Sbjct: 120 LEGMLKRSRGAVVNIGSVNGMAALGHPA-YSAAKAGLIHYTKLLAVEYGRFGIRANAVAP 178

Query: 190 GFVPT 194
           G V T
Sbjct: 179 GTVKT 183

Length = 257

>gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10

 Score = 67.0 bits (164), Expect = 1e-13
 Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 10/173 (5%)

Query: 14  VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDE-AVVKLKARGIEVIGVVCHVSN 72
           VA V  +  G+G  IA R   EG SV +++R++  ++   V  ++  G     V     +
Sbjct: 1   VAAVVGAGDGLGAAIARRFAAEGFSVALAARREAKLEALLVDIIRDAGGSAKAVPTDARD 60

Query: 73  GQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDA 132
             +   L +   E+ G ++V+V NA AN     IL+T   V +K+W++      L  ++A
Sbjct: 61  EDEVIALFDLIEEEIGPLEVLVYNAGAN-VWFPILETTPRVFEKVWEMAAFGGFLAAREA 119

Query: 133 APH-LQKGSSVVLI----SSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP 180
           A   L +G   ++     +S+ G    ++ A     K AL  L +++A E+ P
Sbjct: 120 AKRMLARGRGTIIFTGATASLRGRAGFAAFAG---AKFALRALAQSMARELGP 169

This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 66.8 bits (164), Expect = 2e-13
 Identities = 52/189 (27%), Positives = 88/189 (46%), Gaps = 15/189 (7%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
            +GKV +VT + +GIG    E+L   GA+ V  ++R      E+V  L  R   V+ +  
Sbjct: 4   IKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARD----PESVTDLGPR---VVPLQL 56

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
            V++       +    E    + ++V+NA    +   +L+  E  L    + N    + +
Sbjct: 57  DVTDPAS----VAAAAEAASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAM 112

Query: 129 LQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVN 185
            +  AP L    G ++V + S+  +    ++  Y  +K A   LT+AL AE+AP  TRV 
Sbjct: 113 ARAFAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSASKAAAWSLTQALRAELAPQGTRVL 172

Query: 186 CVAPGFVPT 194
            V PG + T
Sbjct: 173 GVHPGPIDT 181

Length = 238

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 67.3 bits (165), Expect = 2e-13
 Identities = 60/196 (30%), Positives = 100/196 (51%), Gaps = 22/196 (11%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHV 70
           Q KVA+VT ++ GIG   A RL  +G +V  ++R+     + +  L + G+  + +   V
Sbjct: 2   QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRV----DKMEDLASLGVHPLSL--DV 55

Query: 71  SNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESV-LD---KLWDINVKSSI 126
           ++    K  ++  I + G+IDV+V+NA    S  +I    E V +D   + +++N+  + 
Sbjct: 56  TDEASIKAAVDTIIAEEGRIDVLVNNAGYG-SYGAI----EDVPIDEARRQFEVNLFGAA 110

Query: 127 LLLQDAAPHL--QKGSSVVLISSIAG--YQPQSSMAMYGVTKTALLGLTKALAAEMAP-D 181
            L Q   PH+  Q+   ++ ISS+ G  Y P    A Y  TK AL G + AL  E+AP  
Sbjct: 111 RLTQLVLPHMRAQRSGRIINISSMGGKIYTPLG--AWYHATKFALEGFSDALRLEVAPFG 168

Query: 182 TRVNCVAPGFVPTHFA 197
             V  + PG + T + 
Sbjct: 169 IDVVVIEPGGIKTEWG 184

Length = 273

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score = 66.3 bits (162), Expect = 3e-13
 Identities = 53/195 (27%), Positives = 93/195 (47%), Gaps = 13/195 (6%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN-VDEAVVKLKARGIEVIGVV 67
              G+VA VT +  GIG  IA  L   GA V +   +  + + E    ++A G   I + 
Sbjct: 5   DLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIA 64

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAA---ANPSVDSILQTKESVLDKLWDINVKS 124
             V++    +  + +T  + G + + V+ A    ANP+ +   +  ++V+    DIN+  
Sbjct: 65  ADVTSKADLRAAVARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVM----DINLTG 120

Query: 125 SILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSM--AMYGVTKTALLGLTKALAAEMAP 180
             L  Q  A  + +  G S+V I+S++G      +  A Y  +K  ++ L+K+LA E   
Sbjct: 121 VFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAHYNASKAGVIHLSKSLAMEWVG 180

Query: 181 D-TRVNCVAPGFVPT 194
              RVN ++PG+  T
Sbjct: 181 RGIRVNSISPGYTAT 195

Length = 254

>gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional

 Score = 66.7 bits (163), Expect = 3e-13
 Identities = 58/196 (29%), Positives = 93/196 (47%), Gaps = 21/196 (10%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV-CHV 70
            K   +T ++ G G G+ ERL   G  V  + R+   +D+    LKAR  + + V+   V
Sbjct: 2   SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDD----LKARYGDRLWVLQLDV 57

Query: 71  SNGQQRKNLINQTIEKFGKIDVVVSNA------AANPSVDSILQTKESVLDKLWDINVKS 124
           ++    + ++++     G+IDVVVSNA      AA    D+        + +  D N+  
Sbjct: 58  TDSAAVRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELSDA-------QIRRQIDTNLIG 110

Query: 125 SILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-D 181
           SI +++ A PHL  Q G  +V +SS  G       ++Y  TK  + G  +A+A E+AP  
Sbjct: 111 SIQVIRAALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKWGIEGFVEAVAQEVAPFG 170

Query: 182 TRVNCVAPGFVPTHFA 197
                V PG   T+F 
Sbjct: 171 IEFTIVEPGPARTNFG 186

Length = 276

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 66.2 bits (162), Expect = 4e-13
 Identities = 51/200 (25%), Positives = 90/200 (45%), Gaps = 25/200 (12%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVV----SSRKQKNVDEAVVKLKARGIEVIGVV 67
           GK  ++T +   IG  + + +   G  V+          + ++    + K++ + +  V 
Sbjct: 4   GKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSL--VE 61

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESV-LDKLWD---INVK 123
             +++ +  +  ++++ EK+GKID  V+ A   P      +    V LD   +   +++ 
Sbjct: 62  LDITDQESLEEFLSKSAEKYGKIDGAVNCAY--PRNKDYGKKFFDVSLDDFNENLSLHLG 119

Query: 124 SSILLLQDAAPHL--QKGSSVVLISSIAG-YQPQ------SSMAM---YGVTKTALLGLT 171
           SS L  Q  A +   Q G ++V ISSI G   P+      +SM     Y   K  ++ LT
Sbjct: 120 SSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGTSMTSPVEYAAIKAGIIHLT 179

Query: 172 KALAAEMAPDT-RVNCVAPG 190
           K LA        RVNCV+PG
Sbjct: 180 KYLAKYFKDSNIRVNCVSPG 199

Length = 256

>gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional

 Score = 65.7 bits (160), Expect = 5e-13
 Identities = 52/214 (24%), Positives = 99/214 (46%), Gaps = 18/214 (8%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKL-KARGIEVIGV 66
                K  +VT ++QG+G  +A+     GA+V++ +R QK +++    + +A   E   +
Sbjct: 2   ATLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAI 61

Query: 67  VCHVSNGQQRK-NLINQTIEK--FGKIDVVVSNA----AANPSVDSILQTKESVLDKLWD 119
              + + ++++      TI +   GK+D +V  A    A +P      QT    +++ + 
Sbjct: 62  RFDLMSAEEKEFEQFAATIAEATQGKLDGIVHCAGYFYALSPLDF---QTVAEWVNQ-YR 117

Query: 120 INVKSSILLLQDAAPHLQKG--SSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAE 177
           IN  + + L +   P L++   +SV+ +    G  P++    +G +K AL  L K  A E
Sbjct: 118 INTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGFGASKAALNYLCKVAADE 177

Query: 178 --MAPDTRVNCVAPGFVPTHFAEYITSNDGVVSS 209
                + R N + PG  P +  + I S+ G   S
Sbjct: 178 WERFGNLRANVLVPG--PINSPQRIKSHPGEAKS 209

Length = 239

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 65.8 bits (161), Expect = 6e-13
 Identities = 51/190 (26%), Positives = 87/190 (45%), Gaps = 9/190 (4%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCHV 70
            KV  +T +++G G    E     G  VV ++R    + +    L  + G  ++ +   V
Sbjct: 3   EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLAD----LAEKYGDRLLPLALDV 58

Query: 71  SNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQ 130
           ++       +   +E FG++D+VV+NA        I +  ES      D N   ++ + Q
Sbjct: 59  TDRAAVFAAVETAVEHFGRLDIVVNNAGYG-LFGMIEEVTESEARAQIDTNFFGALWVTQ 117

Query: 131 DAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCV 187
              P+L  Q+   ++ ISSI G        +Y  +K AL G+++ALA E+A    +V  V
Sbjct: 118 AVLPYLREQRSGHIIQISSIGGISAFPMSGIYHASKWALEGMSEALAQEVAEFGIKVTLV 177

Query: 188 APGFVPTHFA 197
            PG   T +A
Sbjct: 178 EPGGYSTDWA 187

Length = 275

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score = 66.5 bits (163), Expect = 6e-13
 Identities = 39/183 (21%), Positives = 81/183 (44%), Gaps = 19/183 (10%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
           M K    +V ++T ++ G+G   A      GA VV+ +R ++ ++    +++A G E + 
Sbjct: 2   MLKPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALA 61

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESV----LDKLWDIN 121
           VV  V++ +  +   ++  E+ G ID  V+NA       ++    E V      ++ ++ 
Sbjct: 62  VVADVADAEAVQAAADRAEEELGPIDTWVNNAMV-----TVFGPFEDVTPEEFRRVTEVT 116

Query: 122 ----VKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALA 175
               V  +      A  H+  +   +++ + S   Y+     + Y   K A+ G T +L 
Sbjct: 117 YLGVVHGT----LAALRHMRPRDRGAIIQVGSALAYRSIPLQSAYCAAKHAIRGFTDSLR 172

Query: 176 AEM 178
            E+
Sbjct: 173 CEL 175

Length = 334

>gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional

 Score = 65.4 bits (159), Expect = 7e-13
 Identities = 57/223 (25%), Positives = 100/223 (44%), Gaps = 23/223 (10%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVV-----SSRKQKNVDEAVVKLKARGIEVIGVV 67
           ++A VT    GIG  I +RL  +G  VV      S R+ K +++     KA G + I   
Sbjct: 4   RIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQ----KALGFDFIASE 59

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
            +V +    K   ++   + G+IDV+V+NA     V     T+E      W   + +++ 
Sbjct: 60  GNVGDWDSTKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTRED-----WTAVIDTNLT 114

Query: 128 LLQDAAPHLQKG------SSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD 181
            L +    +  G        ++ ISS+ G + Q     Y   K  + G T +LA E+A  
Sbjct: 115 SLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATK 174

Query: 182 -TRVNCVAPGFVPTHFAEYITSN--DGVVSSVSSLKLSPPSSL 221
              VN V+PG++ T   + I  +  + +V+++   +L  P  +
Sbjct: 175 GVTVNTVSPGYIGTDMVKAIRPDVLEKIVATIPVRRLGSPDEI 217

Length = 246

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 65.8 bits (161), Expect = 8e-13
 Identities = 46/172 (26%), Positives = 80/172 (46%), Gaps = 3/172 (1%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHV 70
            GKV +VT + +GIG  +A RL   GA + +   ++  +     +L      V+ VV  V
Sbjct: 8   AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAEL-GGDDRVLTVVADV 66

Query: 71  SNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQ 130
           ++    +    + +E+FG IDVVV+NA       S+ Q       ++ D+N+      ++
Sbjct: 67  TDLAAMQAAAEEAVERFGGIDVVVANAGIASG-GSVAQVDPDAFRRVIDVNLLGVFHTVR 125

Query: 131 DAAPHL-QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD 181
              P L ++   V+ +SS+A +     MA Y  +K  +     AL  E+A  
Sbjct: 126 ATLPALIERRGYVLQVSSLAAFAAAPGMAAYCASKAGVEAFANALRLEVAHH 177

Length = 296

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 65.5 bits (160), Expect = 1e-12
 Identities = 41/180 (22%), Positives = 86/180 (47%), Gaps = 14/180 (7%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
              GK  ++T ++ GIG   AE+    GA+VV  +R++  +D    ++   G + + V C
Sbjct: 37  DLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPC 96

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDI------NV 122
            +S+      L+    ++ G +D++++NA       SI +     LD+  D+      N 
Sbjct: 97  DLSDLDAVDALVADVEKRIGGVDILINNAGR-----SIRRPLAESLDRWHDVERTMVLNY 151

Query: 123 KSSILLLQDAAPH-LQKGSSVVLISSIAGYQPQSS--MAMYGVTKTALLGLTKALAAEMA 179
            + + L++  AP  L++G   ++  +  G   ++S   ++Y  +K AL  +++ +  E  
Sbjct: 152 YAPLRLIRGLAPGMLERGDGHIINVATWGVLSEASPLFSVYNASKAALSAVSRVIETEWG 211

Length = 293

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 65.7 bits (161), Expect = 1e-12
 Identities = 44/178 (24%), Positives = 85/178 (47%), Gaps = 13/178 (7%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
           GKV ++T ++ GIG   A ++   GA+V + +R  + +DE V +++A+G       C ++
Sbjct: 371 GKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLT 430

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWD------INVKSS 125
           +     + +   + + G +D +V+NA       SI ++ E+  D+  D      +N   +
Sbjct: 431 DSAAVDHTVKDILAEHGHVDYLVNNAGR-----SIRRSVENSTDRFHDYERTMAVNYFGA 485

Query: 126 ILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD 181
           + L+    PH+  ++   VV +SSI         + Y  +K AL   +   A+E   D
Sbjct: 486 VRLILGLLPHMRERRFGHVVNVSSIGVQTNAPRFSAYVASKAALDAFSDVAASETLSD 543

Length = 657

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score = 64.3 bits (157), Expect = 2e-12
 Identities = 41/188 (21%), Positives = 75/188 (39%), Gaps = 13/188 (6%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV--IGVVCH 69
            +VA+V    Q +G  +   L  EG  V V+    +       ++ A   E    G    
Sbjct: 2   NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGAD 61

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAA---ANPSVDSILQTKESVLDKLWDINVKSSI 126
            ++ Q    L     E FG++D++V NA    A    D  L   +  L     +N+    
Sbjct: 62  ATSEQSVLALSRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSL----QVNLVGYF 117

Query: 127 LLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-T 182
           L  ++ +  + +      ++ I+S +G       + Y   K   +GLT++LA ++A    
Sbjct: 118 LCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAEYGI 177

Query: 183 RVNCVAPG 190
            V+ +  G
Sbjct: 178 TVHSLMLG 185

Length = 259

>gnl|CDD|169389 PRK08339, PRK08339, short chain dehydrogenase; Provisional

 Score = 64.1 bits (156), Expect = 2e-12
 Identities = 45/187 (24%), Positives = 97/187 (51%), Gaps = 6/187 (3%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG-IEVIGVVCHV 70
           GK+A  TAS++GIGFG+A  L   GA V++ SR ++N+ +A  K+K+   ++V  +V  +
Sbjct: 8   GKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADL 67

Query: 71  SNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQ 130
           +  +  +  + + ++  G+ D+   +    P     ++      +    + +  ++ L +
Sbjct: 68  TKREDLERTVKE-LKNIGEPDIFFFSTGG-PKPGYFMEMSMEDWEGAVKLLLYPAVYLTR 125

Query: 131 DAAPHLQKG--SSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNCV 187
              P +++     ++  +S+A  +P  ++A+  V + ++ GL + LA E+ P    VN +
Sbjct: 126 ALVPAMERKGFGRIIYSTSVAIKEPIPNIALSNVVRISMAGLVRTLAKELGPKGITVNGI 185

Query: 188 APGFVPT 194
            PG + T
Sbjct: 186 MPGIIRT 192

Length = 263

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 63.6 bits (155), Expect = 3e-12
 Identities = 42/139 (30%), Positives = 70/139 (50%), Gaps = 12/139 (8%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK-LKARGIEVIGVVCHV 70
           GK A+VT S++GIG   A+ L   GA VVV+ R++      VV  ++A G     V   +
Sbjct: 6   GKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADL 65

Query: 71  SNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLW--DINVKSSILL 128
           ++ +    L++   E+FG +D +V NA+            ES +D+ +   +N  +   L
Sbjct: 66  TDEESVAALMDTAREEFGGLDALVLNASGGM---------ESGMDEDYAMRLNRDAQRNL 116

Query: 129 LQDAAPHLQKGSSVVLISS 147
            + A P +  GS VV ++S
Sbjct: 117 ARAALPLMPAGSRVVFVTS 135

Length = 248

>gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional

 Score = 63.3 bits (154), Expect = 4e-12
 Identities = 54/166 (32%), Positives = 87/166 (52%), Gaps = 9/166 (5%)

Query: 16  IVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQ 75
           +VTAS++GIGF +A  L  +GA VV+SSR ++N+++A+ +LK  G EV  V   +S+   
Sbjct: 4   LVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYG-EVYAVKADLSDKDD 62

Query: 76  RKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKS------SILLL 129
            KNL+ +  E  G ID +V N A N   +  +  +    D L    +        + LL+
Sbjct: 63  LKNLVKEAWELLGGIDALVWN-AGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLI 121

Query: 130 QDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALA 175
           Q       KG  V L SS++  +P   + +  VT+  L+ L K ++
Sbjct: 122 QAWLEKKMKGVLVYL-SSVSVKEPMPPLVLADVTRAGLVQLAKGVS 166

Length = 259

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score = 61.9 bits (151), Expect = 1e-11
 Identities = 51/189 (26%), Positives = 79/189 (41%), Gaps = 21/189 (11%)

Query: 17  VTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH---VSNG 73
           +T +  GIG   A     EG  V        +++EA +   A  +           V++ 
Sbjct: 6   ITGAASGIGRATALLFAAEGWRVGAY-----DINEAGLAALAAELGAGNAWTGALDVTDR 60

Query: 74  QQRKNLINQTIEKF-----GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
                  +  +  F     G++DV+ +NA             E+  D++ DINVK  +  
Sbjct: 61  AA----WDAALADFAAATGGRLDVLFNNAGILRGGPFEDIPLEAH-DRVIDINVKGVLNG 115

Query: 129 LQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVN 185
              A P+L+   G+ V+  SS +    Q  +A+Y  TK A+ GLT+AL  E      RV 
Sbjct: 116 AHAALPYLKATPGARVINTSSASAIYGQPGLAVYSATKFAVRGLTEALDLEWRRHGIRVA 175

Query: 186 CVAPGFVPT 194
            V P FV T
Sbjct: 176 DVMPLFVDT 184

Length = 260

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 61.1 bits (149), Expect = 3e-11
 Identities = 48/193 (24%), Positives = 84/193 (43%), Gaps = 24/193 (12%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
             + K  ++T ++ GIG  +AE L   GA +++  R      E +  L AR         
Sbjct: 2   DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNA----EKLEALAARLPYPGRHRW 57

Query: 69  HVSN--GQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSI 126
            V++   +  +  +     + G I+V+++NA  N     +       +++L  +N+ + +
Sbjct: 58  VVADLTSEAGREAVLARAREMGGINVLINNAGVN-HFALLEDQDPEAIERLLALNLTAPM 116

Query: 127 LLLQDAAPHLQKGSS--VVLISSI------AGYQPQSSMAMYGVTKTALLGLTKALAAEM 178
            L +   P L+   S  VV + S        GY      A Y  +K AL G ++AL  E+
Sbjct: 117 QLTRALLPLLRAQPSAMVVNVGSTFGSIGYPGY------ASYCASKFALRGFSEALRREL 170

Query: 179 APDTRVNC--VAP 189
           A DT V    +AP
Sbjct: 171 A-DTGVRVLYLAP 182

Length = 263

>gnl|CDD|180949 PRK07370, PRK07370, enoyl-(acyl carrier protein) reductase; Validated

 Score = 60.1 bits (146), Expect = 6e-11
 Identities = 53/195 (27%), Positives = 91/195 (46%), Gaps = 16/195 (8%)

Query: 12  GKVAIVT--ASTQGIGFGIAERLGLEGASVVVS------SRKQKNVDEAVVKLKARGIEV 63
           GK A+VT  A+ + I +GIA++L   GA + ++       R +K V E    L       
Sbjct: 6   GKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPS---- 61

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAA-ANPS--VDSILQTKESVLDKLWDI 120
           + + C V +  Q +       +K+GK+D++V   A A     +     T      +  +I
Sbjct: 62  LFLPCDVQDDAQIEETFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEI 121

Query: 121 NVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP 180
           +  S   L + A P + +G S+V ++ + G +   +  + GV K AL    + LAAE+ P
Sbjct: 122 SAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVRAIPNYNVMGVAKAALEASVRYLAAELGP 181

Query: 181 DT-RVNCVAPGFVPT 194
              RVN ++ G + T
Sbjct: 182 KNIRVNAISAGPIRT 196

Length = 258

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score = 59.8 bits (145), Expect = 6e-11
 Identities = 56/195 (28%), Positives = 89/195 (45%), Gaps = 18/195 (9%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
           KV ++T +++GIG   A      G SV ++ +R     +E    ++A G     V   V+
Sbjct: 3   KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVA 62

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAA----ANPSVDSILQTKESVLDKLWDINVKSSIL 127
           N      + +     FG++D +V+NA     + P  D         L +++D NV  + L
Sbjct: 63  NEADVIAMFDAVQSAFGRLDALVNNAGIVAPSMPLADMDAAR----LRRMFDTNVLGAYL 118

Query: 128 LLQDAAPHLQK-----GSSVVLISSIAGY--QPQSSMAMYGVTKTALLGLTKALAAEMAP 180
             ++AA  L       G ++V +SSIA     P   +  Y  +K A+  LT  LA E+ P
Sbjct: 119 CAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVD-YAGSKGAVDTLTLGLAKELGP 177

Query: 181 D-TRVNCVAPGFVPT 194
              RVN V PG + T
Sbjct: 178 HGVRVNAVRPGLIET 192

Length = 248

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score = 58.8 bits (142), Expect = 1e-10
 Identities = 46/186 (24%), Positives = 93/186 (50%), Gaps = 7/186 (3%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
           G+ A+VT ++ GIG  IA  L  +GA V +   + + ++    +L  R   V     ++S
Sbjct: 6   GRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGER---VKIFPANLS 62

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQD 131
           +  + K L  +       +D++V+NA         ++  +   D + ++N+ ++  L ++
Sbjct: 63  DRDEVKALGQKAEADLEGVDILVNNAGITKD-GLFVRMSDEDWDSVLEVNLTATFRLTRE 121

Query: 132 AAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVA 188
               +  ++   ++ I+S+ G       A Y  +K  ++G +K+LA E+A  +  VNCVA
Sbjct: 122 LTHPMMRRRYGRIINITSVVGVTGNPGQANYCASKAGMIGFSKSLAQEIATRNVTVNCVA 181

Query: 189 PGFVPT 194
           PGF+ +
Sbjct: 182 PGFIES 187

Length = 245

>gnl|CDD|131732 TIGR02685, pter_reduc_Leis, pteridine reductase

 Score = 59.2 bits (143), Expect = 2e-10
 Identities = 57/206 (27%), Positives = 86/206 (41%), Gaps = 33/206 (16%)

Query: 14  VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKL-----KARGIEVIGVVC 68
            A+VT + + IG  IA  L  EG  VV+          A   L       R    +    
Sbjct: 3   AAVVTGAAKRIGSSIAVALHQEGYRVVLHYH---RSAAAASTLAAELNARRPNSAVTCQA 59

Query: 69  HVSNGQQR----KNLINQTIEKFGKIDVVVSNAAA---NPSV-------DSILQTKESVL 114
            +SN        + +I+     FG+ DV+V+NA+A    P +           ++ E  +
Sbjct: 60  DLSNSATLFSRCEAIIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQV 119

Query: 115 DKLWDINVKSSILLLQDAAPHLQKGS---------SVVLISSIAGYQPQSSMAMYGVTKT 165
            +L+  N  +   L++  A   Q G+         S+V +      QP     MY + K 
Sbjct: 120 AELFGSNAIAPYFLIKAFAQR-QAGTRAEQRSTNLSIVNLCDAMTDQPLLGFTMYTMAKH 178

Query: 166 ALLGLTKALAAEMAP-DTRVNCVAPG 190
           AL GLT++ A E+AP   RVN VAPG
Sbjct: 179 ALEGLTRSAALELAPLQIRVNGVAPG 204

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. Length = 267

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 58.1 bits (141), Expect = 2e-10
 Identities = 44/188 (23%), Positives = 78/188 (41%), Gaps = 18/188 (9%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
           F  K  ++T +  GIG   A     +GA V    ++ K   +         +++   +  
Sbjct: 3   FMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDK--PDLSGNFHFLQLDLSDDLEP 60

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLL 129
           +              +    +D++ + A        +L T       ++D N+ S+ LL 
Sbjct: 61  L-------------FDWVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLT 107

Query: 130 QDAAPH-LQKGSSVVL-ISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNC 186
           +   P  L++ S +++ + SIA +      A Y  +K AL G TK LA + A D  +V  
Sbjct: 108 RAYLPQMLERKSGIIINMCSIASFVAGGGGAAYTASKHALAGFTKQLALDYAKDGIQVFG 167

Query: 187 VAPGFVPT 194
           +APG V T
Sbjct: 168 IAPGAVKT 175

Length = 235

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 58.1 bits (141), Expect = 3e-10
 Identities = 50/192 (26%), Positives = 82/192 (42%), Gaps = 7/192 (3%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
           M     GK  ++T +++GIG   AE    EG  + + +R    ++     L+A     + 
Sbjct: 1   MDLHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAH--GVD 58

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSS 125
           V  H  +         Q   + G ID++V+NA A P    +    ++     W++ V   
Sbjct: 59  VAVHALD-LSSPEAREQLAAEAGDIDILVNNAGAIPG-GGLDDVDDAAWRAGWELKVFGY 116

Query: 126 ILLLQDAAPHLQKGSSVVLISSI--AGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-T 182
           I L + A P ++   S V+++ I  AG  P +          AL+  T+AL  +   D  
Sbjct: 117 IDLTRLAYPRMKARGSGVIVNVIGAAGENPDADYICGSAGNAALMAFTRALGGKSLDDGV 176

Query: 183 RVNCVAPGFVPT 194
           RV  V PG V T
Sbjct: 177 RVVGVNPGPVAT 188

Length = 259

>gnl|CDD|223696 COG0623, FabI, Enoyl-[acyl-carrier-protein]

 Score = 57.6 bits (140), Expect = 4e-10
 Identities = 48/196 (24%), Positives = 91/196 (46%), Gaps = 27/196 (13%)

Query: 11  QGKVAIVT--ASTQGIGFGIAERLGLEGASVVVS---SRKQKNVDEAVVKLKARGIEVIG 65
           +GK  ++   A+ + I +GIA+ L  +GA +  +    R +K V+E   +L +  +    
Sbjct: 5   EGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELGSDLV---- 60

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVV-------SNAAANPSVDSILQTKESVLDKLW 118
           + C V+N +    L     +K+GK+D +V               +D+   ++E  L  + 
Sbjct: 61  LPCDVTNDESIDALFATIKKKWGKLDGLVHSIAFAPKEELKGDYLDT---SREGFLIAM- 116

Query: 119 DINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMY---GVTKTALLGLTKALA 175
           DI+  S   L + A P +  G S++ ++ +     +  +  Y   GV K AL    + LA
Sbjct: 117 DISAYSFTALAKAARPLMNNGGSILTLTYLGS---ERVVPNYNVMGVAKAALEASVRYLA 173

Query: 176 AEMAPD-TRVNCVAPG 190
           A++  +  RVN ++ G
Sbjct: 174 ADLGKEGIRVNAISAG 189

Length = 259

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 57.7 bits (140), Expect = 5e-10
 Identities = 49/176 (27%), Positives = 88/176 (50%), Gaps = 12/176 (6%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSR---KQKNVDEAVVKLKARG-IEVIGVV 67
            K+AIVT ++ G G      L  +G  V+ + R   KQ+N+     +L  +  I+V  + 
Sbjct: 3   KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQL- 61

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAA-ANPSVDSILQTKESVLDKLWDINVKSSI 126
             V++     N     +++ G+ID++V+NA  AN      +  +E    K ++ NV  +I
Sbjct: 62  -DVTDQNSIHN-FQLVLKEIGRIDLLVNNAGYANGGFVEEIPVEE--YRKQFETNVFGAI 117

Query: 127 LLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP 180
            + Q   P++  QK   ++ ISSI+G      ++ Y  +K AL G +++L  E+ P
Sbjct: 118 SVTQAVLPYMRKQKSGKIINISSISGRVGFPGLSPYVSSKYALEGFSESLRLELKP 173

Length = 280

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 57.2 bits (139), Expect = 6e-10
 Identities = 54/191 (28%), Positives = 89/191 (46%), Gaps = 16/191 (8%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG----- 65
           + ++ +VT +  GIG   A      GA+V++  R ++ + EAV       IE  G     
Sbjct: 11  KDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKL-EAV----YDEIEAAGGPQPA 65

Query: 66  -VVCHVSNG--QQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINV 122
            +   +     Q  + L +   E+FG++D V+ NA     +  + Q    V   +  +NV
Sbjct: 66  IIPLDLLTATPQNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNV 125

Query: 123 KSSILLLQDAAPHLQKG--SSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP 180
            ++ +L Q   P L K   +S+V  SS  G Q +++   Y V+K A  G+ + LA E   
Sbjct: 126 NATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRANWGAYAVSKFATEGMMQVLADEYQG 185

Query: 181 DT-RVNCVAPG 190
              RVNC+ PG
Sbjct: 186 TNLRVNCINPG 196

Length = 247

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score = 56.4 bits (136), Expect = 1e-09
 Identities = 46/190 (24%), Positives = 81/190 (42%), Gaps = 8/190 (4%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
            +A+VT  ++GIG   A  L  EG +V V+  +      E V  +   G +   +   +S
Sbjct: 2   AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADIS 61

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQD 131
           +  Q   +     +    +  +V+NA    +  ++       ++++   NV    L  ++
Sbjct: 62  DENQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCRE 121

Query: 132 AAPHLQ-----KGSSVVLISSIAG-YQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRV 184
           A   +       G ++V +SS A           Y  +K A+  LT  L+ E+A    RV
Sbjct: 122 AVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASKGAIDTLTTGLSLEVAAQGIRV 181

Query: 185 NCVAPGFVPT 194
           NCV PGF+ T
Sbjct: 182 NCVRPGFIYT 191

Length = 247

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 56.3 bits (136), Expect = 1e-09
 Identities = 49/190 (25%), Positives = 91/190 (47%), Gaps = 15/190 (7%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
            V ++T  + GIG  +A+     G  V  ++RK ++V+     L A G     V   V++
Sbjct: 2   PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEA----LAAAGF--TAVQLDVND 55

Query: 73  GQQRKNLINQTIEKFGKIDVVVSNA---AANPSVDSILQTKESVLDKLWDINVKSSILLL 129
           G     L  +   + G +DV+++NA   A  P +D  ++     + + ++ NV + + + 
Sbjct: 56  GAALARLAEELEAEHGGLDVLINNAGYGAMGPLLDGGVEA----MRRQFETNVFAVVGVT 111

Query: 130 QDAAPHLQKGSSVVL-ISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCV 187
           +   P L++   +V+ I S++G         Y  +K A+  L+ AL  E+AP   +V  V
Sbjct: 112 RALFPLLRRSRGLVVNIGSVSGVLVTPFAGAYCASKAAVHALSDALRLELAPFGVQVMEV 171

Query: 188 APGFVPTHFA 197
            PG + + FA
Sbjct: 172 QPGAIASQFA 181

Length = 274

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score = 54.7 bits (132), Expect = 4e-09
 Identities = 50/188 (26%), Positives = 90/188 (47%), Gaps = 23/188 (12%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           +  +VT +T+GIG  ++ RL   G  V+  +R    +D+   +L A         C +++
Sbjct: 4   RTVLVTGATKGIGLALSLRLANLGHQVIGIARSA--IDDFPGELFA---------CDLAD 52

Query: 73  GQQRKNLINQTIEKFGKIDVVVSNAA-ANPSVDSILQTKESVLDKLWDINVKSSILLLQD 131
            +Q    + Q  E    +D +V+N   A P    + +   + L  ++D+NV++++ + Q 
Sbjct: 53  IEQTAATLAQINEIHP-VDAIVNNVGIALPQ--PLGKIDLAALQDVYDLNVRAAVQVTQA 109

Query: 132 AAPHLQKGSS--VVLISS--IAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNC 186
               ++      +V I S  I G   ++S   Y   K+AL+G T+  A E+A     VN 
Sbjct: 110 FLEGMKLREQGRIVNICSRAIFGALDRTS---YSAAKSALVGCTRTWALELAEYGITVNA 166

Query: 187 VAPGFVPT 194
           VAPG + T
Sbjct: 167 VAPGPIET 174

Length = 234

>gnl|CDD|235694 PRK06079, PRK06079, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 54.7 bits (132), Expect = 4e-09
 Identities = 49/198 (24%), Positives = 90/198 (45%), Gaps = 15/198 (7%)

Query: 6   MAKRFQGKVAIV--TASTQGIGFGIAERLGLEGASVVVS---SRKQKNVDEAVVKLKARG 60
           M+    GK  +V   A+ + I +G A+ +  +GA+V+ +    R +K++ + V       
Sbjct: 1   MSGILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLV------D 54

Query: 61  IEVIGVVCHVSNGQQRKNLINQTIEKFGKID-VVVSNAAANPS--VDSILQTKESVLDKL 117
            E + V C V++ +  +       E+ GKID +V + A A       ++  T        
Sbjct: 55  EEDLLVECDVASDESIERAFATIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALA 114

Query: 118 WDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAE 177
            DI+  S I + + A P L  G+S+V ++     +   +  + G+ K AL    + LA +
Sbjct: 115 QDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERAIPNYNVMGIAKAALESSVRYLARD 174

Query: 178 MAPD-TRVNCVAPGFVPT 194
           +     RVN ++ G V T
Sbjct: 175 LGKKGIRVNAISAGAVKT 192

Length = 252

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 54.2 bits (131), Expect = 5e-09
 Identities = 49/188 (26%), Positives = 76/188 (40%), Gaps = 21/188 (11%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLK-ARGIEVIGVVCHVS 71
             A++T +++GIG  IA  L     ++++  R  + +DE   +L  A    V        
Sbjct: 4   PTALITGASRGIGAAIAREL-APTHTLLLGGRPAERLDELAAELPGATPFPVDLT----- 57

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLW----DINVKSSIL 127
                   I   +E+ G++DV+V NA       + L          W    ++NV +   
Sbjct: 58  ----DPEAIAAAVEQLGRLDVLVHNAGV-----ADLGPVAESTVDEWRATLEVNVVAPAE 108

Query: 128 LLQDAAPHLQ-KGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNC 186
           L +   P L+     VV I+S AG +       Y  +K AL  L  AL  E   + RV  
Sbjct: 109 LTRLLLPALRAAHGHVVFINSGAGLRANPGWGSYAASKFALRALADALREEEPGNVRVTS 168

Query: 187 VAPGFVPT 194
           V PG   T
Sbjct: 169 VHPGRTDT 176

Length = 227

>gnl|CDD|180586 PRK06483, PRK06483, dihydromonapterin reductase; Provisional

 Score = 54.2 bits (131), Expect = 6e-09
 Identities = 41/185 (22%), Positives = 75/185 (40%), Gaps = 18/185 (9%)

Query: 16  IVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQ 75
           ++T + Q IG  +A  L  +G  V+VS R       A+  L+  G     +    S    
Sbjct: 6   LITGAGQRIGLALAWHLLAQGQPVIVSYRTHY---PAIDGLRQAG--AQCIQADFSTNAG 60

Query: 76  RKNLINQTIEKFGKIDVVVSNAAA----NPSVDSILQTKESVLDKLWDINVKSSILLLQD 131
               I++  +    +  ++ NA+      P           VL ++  I+V +  LL   
Sbjct: 61  IMAFIDELKQHTDGLRAIIHNASDWLAEKPGAPL-----ADVLARMMQIHVNAPYLLNLA 115

Query: 132 AAPHLQKG----SSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCV 187
               L+      S ++ I+     +       Y  +K AL  +T + AA++AP+ +VN +
Sbjct: 116 LEDLLRGHGHAASDIIHITDYVVEKGSDKHIAYAASKAALDNMTLSFAAKLAPEVKVNSI 175

Query: 188 APGFV 192
           AP  +
Sbjct: 176 APALI 180

Length = 236

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 53.6 bits (129), Expect = 8e-09
 Identities = 36/114 (31%), Positives = 52/114 (45%), Gaps = 5/114 (4%)

Query: 115 DKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTK 172
           D++ DINVK  +     A P+L+   G+ V+  +S +    Q  +A+Y  TK A+ GLT+
Sbjct: 101 DRMVDINVKGVLNGAYAALPYLKATPGARVINTASSSAIYGQPDLAVYSATKFAVRGLTE 160

Query: 173 ALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV 225
           AL  E A    RV  V P FV T          G        ++ P S +   V
Sbjct: 161 ALDVEWARHGIRVADVWPWFVDTPILT--KGETGAAPKKGLGRVLPVSDVAKVV 212

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 54.0 bits (130), Expect = 1e-08
 Identities = 54/195 (27%), Positives = 89/195 (45%), Gaps = 25/195 (12%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLE--GASVVVSSRKQKNVDEAVV-KLKARGIEVIGVVC 68
           GKVA+VT +    G G AE LGL   GA+VVV+          V+ +++A G + + V  
Sbjct: 12  GKVAVVTGA--AAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAG 69

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWD----INVKS 124
            +S       L+   +   G +D+VV+NA    + D +L    ++ D+ WD    ++++ 
Sbjct: 70  DISQRATADELVATAVG-LGGLDIVVNNAGI--TRDRMLF---NMSDEEWDAVIAVHLRG 123

Query: 125 SILLLQDAAPHLQKGSS---------VVLISSIAGYQPQSSMAMYGVTKTALLGLTKALA 175
             LL ++AA + +  +          +V  SS AG       A YG  K  +  LT + A
Sbjct: 124 HFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQANYGAAKAGITALTLSAA 183

Query: 176 AEMAP-DTRVNCVAP 189
             +     R N + P
Sbjct: 184 RALGRYGVRANAICP 198

Length = 306

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 53.1 bits (128), Expect = 2e-08
 Identities = 49/189 (25%), Positives = 83/189 (43%), Gaps = 10/189 (5%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVI-GVVCHVS 71
           K   VT +  GIG   A RL  +GA + ++ R    + + V   +A G  V       +S
Sbjct: 1   KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDIS 60

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNA--AANPSVDSILQTKESVLDKLWDINVKSSILLL 129
           +               G +DVV++ A  +A  +VD +   +     ++ D+N+   I ++
Sbjct: 61  DYDAVAAFAADIHAAHGSMDVVMNIAGISAWGTVDRLTHEQWR---RMVDVNLMGPIHVI 117

Query: 130 QDAAPHL---QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVN 185
           +   P +    +G  +V +SS AG       A Y  +K  L GL++ L  ++A     V+
Sbjct: 118 ETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGLRGLSEVLRFDLARHGIGVS 177

Query: 186 CVAPGFVPT 194
            V PG V T
Sbjct: 178 VVVPGAVKT 186

Length = 272

>gnl|CDD|181417 PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 52.5 bits (126), Expect = 2e-08
 Identities = 44/199 (22%), Positives = 87/199 (43%), Gaps = 10/199 (5%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK--LKARGIEV 63
           M+   +GK  +++  T+GIG  I       G ++  +          + +   +  GI+ 
Sbjct: 2   MSNEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKA 61

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNA-----AANPSVDSILQTKESVLDKLW 118
                ++   +  K L  +  E F ++D  +SNA     A        ++ K   L+ ++
Sbjct: 62  KAYPLNILEPETYKELFKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIY 121

Query: 119 DINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAA 176
              V + ++  Q+AA  ++K  G S++ +SS        + A +G +K A+  + K  A 
Sbjct: 122 TATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIENYAGHGTSKAAVETMVKYAAT 181

Query: 177 EMAP-DTRVNCVAPGFVPT 194
           E+   + RVN V+ G + T
Sbjct: 182 ELGEKNIRVNAVSGGPIDT 200

Length = 260

>gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional

 Score = 52.4 bits (126), Expect = 3e-08
 Identities = 44/184 (23%), Positives = 80/184 (43%), Gaps = 8/184 (4%)

Query: 15  AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQ 74
           A+V  ++ GIG   A  L   G  V + +R+ +  +E V K++A G E +     V++  
Sbjct: 13  ALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPD 72

Query: 75  QRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAP 134
             K+ + Q  E  G+I+V+VS  A +     + +      +    I++  +  L     P
Sbjct: 73  SVKSFVAQAEEALGEIEVLVS-GAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLP 131

Query: 135 HL---QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEM-APDTRVNCVAPG 190
            +   ++G  ++ + S    + +  M  YG  K  L  +   L  E+     R + V PG
Sbjct: 132 GMIERRRGD-LIFVGSDVALRQRPHMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPG 190

Query: 191 FVPT 194
             PT
Sbjct: 191 --PT 192

Length = 274

>gnl|CDD|181416 PRK08415, PRK08415, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 52.4 bits (126), Expect = 3e-08
 Identities = 48/183 (26%), Positives = 84/183 (45%), Gaps = 11/183 (6%)

Query: 19  ASTQGIGFGIAERLGLEGASVV---VSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQ 75
           A+ + I +GIA+    +GA +    ++   +K V+    +L +  +        VS  + 
Sbjct: 14  ANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYV----YELDVSKPEH 69

Query: 76  RKNLINQTIEKFGKIDVVVSNAAANPS---VDSILQTKESVLDKLWDINVKSSILLLQDA 132
            K+L     +  GKID +V + A  P      S L+T +   +   +I+V S I L +  
Sbjct: 70  FKSLAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRAL 129

Query: 133 APHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNCVAPGF 191
            P L  G+SV+ +S + G +      + GV K AL    + LA ++     RVN ++ G 
Sbjct: 130 LPLLNDGASVLTLSYLGGVKYVPHYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGP 189

Query: 192 VPT 194
           + T
Sbjct: 190 IKT 192

Length = 274

>gnl|CDD|236308 PRK08594, PRK08594, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 48.6 bits (116), Expect = 5e-07
 Identities = 49/206 (23%), Positives = 86/206 (41%), Gaps = 27/206 (13%)

Query: 6   MAKRFQGKVAIV--TASTQGIGFGIAERLGLEGASVVVSSRKQ---KNVDEAVVKLKARG 60
           M    +GK  +V   A+ + I +GIA  L   GA +V +   +   K V E    L+  G
Sbjct: 1   MMLSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLE--G 58

Query: 61  IEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAA-----------ANPSVDSILQT 109
            E + + C V++ ++         E+ G I  V    A              S D  L  
Sbjct: 59  QESLLLPCDVTSDEEITACFETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLA 118

Query: 110 KESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLG 169
           +        +I+  S   + ++A   + +G S+V ++ + G +   +  + GV K +L  
Sbjct: 119 Q--------NISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERVVQNYNVMGVAKASLEA 170

Query: 170 LTKALAAEMAPD-TRVNCVAPGFVPT 194
             K LA ++  D  RVN ++ G + T
Sbjct: 171 SVKYLANDLGKDGIRVNAISAGPIRT 196

Length = 257

>gnl|CDD|187645 cd08941, 3KS_SDR_c, 3-keto steroid reductase, classical (c) SDRs

 Score = 48.9 bits (117), Expect = 5e-07
 Identities = 47/239 (19%), Positives = 84/239 (35%), Gaps = 58/239 (24%)

Query: 13  KVAIVTASTQGIGFGIAERL-----GLEGASVVVSSRKQKNVDEAVVKLKA----RGIEV 63
           KV +VT +  G+G  I ERL          +++++ R  +  + A   L A      +  
Sbjct: 2   KVVLVTGANSGLGLAICERLLAEDDENPELTLILACRNLQRAEAACRALLASHPDARVVF 61

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAA--NPSVDSILQTKESVLDKL---- 117
             V+  +SN         +  +++ ++D +  NA    NP +D I   KE + + L    
Sbjct: 62  DYVLVDLSNMVSVFAAAKELKKRYPRLDYLYLNAGIMPNPGIDWIGAIKEVLTNPLFAVT 121

Query: 118 --------------------------WDINVKSSILLLQDAAPHL---QKGSSVVLISSI 148
                                     +  NV     L+++  P L     GS ++  SS+
Sbjct: 122 NPTYKIQAEGLLSQGDKATEDGLGEVFQTNVFGHYYLIRELEPLLCRSDGGSQIIWTSSL 181

Query: 149 AG---------YQPQSSMAMYGVTKTALLGLTKAL---AAEMAPDTRVNCVAPGFVPTH 195
                       Q     A Y  +K  +  L+ AL     ++   + V    PG   T+
Sbjct: 182 NASPKYFSLEDIQHLKGPAPYSSSKYLVDLLSLALNRKFNKLGVYSYVVH--PGICTTN 238

3-keto steroid reductase (in concert with other enzymes) catalyzes NADP-dependent sterol C-4 demethylation, as part of steroid biosynthesis. 3-keto reductase is a classical SDR, with a well conserved canonical active site tetrad and fairly well conserved characteristic NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 290

>gnl|CDD|187654 cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13 ketoreductase (KR), classical (c)-like SDRs

 Score = 47.9 bits (114), Expect = 1e-06
 Identities = 44/187 (23%), Positives = 77/187 (41%), Gaps = 16/187 (8%)

Query: 17  VTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQR 76
           +T S+ G+G   A  L  +G  VV+ +R QK   +A          +IG    +S+  + 
Sbjct: 12  ITGSSDGLGLAAARTLLHQGHEVVLHARSQKRAADAKAACPGAAGVLIG---DLSSLAET 68

Query: 77  KNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL-------- 128
           + L +Q +   G+ D V+ NA    S  +       +   +  +NV +  +L        
Sbjct: 69  RKLADQ-VNAIGRFDAVIHNAGIL-SGPNRKTPDTGI-PAMVAVNVLAPYVLTALIRRPK 125

Query: 129 -LQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCV 187
            L   +  + +G +  L       + ++    Y  +K  +L L  A+A     D   N V
Sbjct: 126 RLIYLSSGMHRGGNASLDDIDWFNRGENDSPAYSDSKLHVLTLAAAVA-RRWKDVSSNAV 184

Query: 188 APGFVPT 194
            PG+VPT
Sbjct: 185 HPGWVPT 191

Daunorubicin is a clinically important therapeutic compound used in some cancer treatments. Daunorubicin C-13 ketoreductase is member of the classical SDR family with a canonical glycine-rich NAD(P)-binding motif, but lacking a complete match to the active site tetrad characteristic of this group. The critical Tyr, plus the Lys and upstream Asn are present, but the catalytic Ser is replaced, generally by Gln. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 260

>gnl|CDD|236229 PRK08303, PRK08303, short chain dehydrogenase; Provisional

 Score = 47.7 bits (114), Expect = 1e-06
 Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 16/104 (15%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSR----KQKNVD---------EA 52
           M K  +GKVA+V  +T+G G GIA  LG  GA+V V+ R    ++   D         E 
Sbjct: 2   MMKPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAEL 61

Query: 53  VVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSN 96
           V     RGI V   V H    +Q + L+ +   + G++D++V++
Sbjct: 62  VTAAGGRGIAV--QVDH-LVPEQVRALVERIDREQGRLDILVND 102

Length = 305

>gnl|CDD|187583 cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehydrogenase (SDH), classical (c) SDRs

 Score = 47.5 bits (113), Expect = 1e-06
 Identities = 42/191 (21%), Positives = 75/191 (39%), Gaps = 18/191 (9%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVV----SSRKQKNVDEAVVKLKARGIEVIGV 66
             +VA+V    Q +G  +   L   G  V V    S   +K  DE   +    G +  G 
Sbjct: 1   MNQVAVVIGGGQTLGEFLCHGLAEAGYDVAVADINSENAEKVADEINAEY---GEKAYGF 57

Query: 67  VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAA---ANPSVDSILQTKESVLDKLWDINVK 123
               +N Q    L     E F ++D++V +A    +    D  L   +  L     +N+ 
Sbjct: 58  GADATNEQSVIALSKGVDEIFKRVDLLVYSAGIAKSAKITDFELGDFDRSL----QVNLV 113

Query: 124 SSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP 180
              L  ++ +  + +      ++ I+S +G       + Y   K   +GLT++LA ++A 
Sbjct: 114 GYFLCAREFSKLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAE 173

Query: 181 -DTRVNCVAPG 190
               VN +  G
Sbjct: 174 HGITVNSLMLG 184

Sorbitol 6-phosphate dehydrogenase (SDH, aka glucitol 6-phosphate dehydrogenase) catalyzes the NAD-dependent interconversion of D-fructose 6-phosphate to D-sorbitol 6-phosphate. SDH is a member of the classical SDRs, with the characteristic catalytic tetrad, but without a complete match to the typical NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|166421 PLN02780, PLN02780, ketoreductase/ oxidoreductase

 Score = 47.6 bits (113), Expect = 1e-06
 Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 19/218 (8%)

Query: 5   KMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSR---KQKNVDEAVVKLKARGI 61
           K  K++ G  A+VT  T GIG G A +L  +G ++V+ +R   K K+V ++ ++ K    
Sbjct: 47  KNLKKY-GSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDS-IQSKYSKT 104

Query: 62  EVIGVVC----HVSNGQQRKNLINQTIEKFGKIDVVVSNAAAN-PSVDSILQTKESVLDK 116
           ++  VV      +  G +R   I +TIE    + V+++N   + P      +  E +L  
Sbjct: 105 QIKTVVVDFSGDIDEGVKR---IKETIEGL-DVGVLINNVGVSYPYARFFHEVDEELLKN 160

Query: 117 LWDINVKSSILLLQDAAPHL---QKGSSVVLISSIAGYQPQSSM-AMYGVTKTALLGLTK 172
           L  +NV+ +  + Q   P +   +KG+ + + S  A   P   + A+Y  TK  +   ++
Sbjct: 161 LIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDPLYAVYAATKAYIDQFSR 220

Query: 173 ALAAEMAPD-TRVNCVAPGFVPTHFAEYITSNDGVVSS 209
            L  E       V C  P +V T  A    S+  V SS
Sbjct: 221 CLYVEYKKSGIDVQCQVPLYVATKMASIRRSSFLVPSS 258

Length = 320

>gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional

 Score = 46.9 bits (112), Expect = 2e-06
 Identities = 45/193 (23%), Positives = 81/193 (41%), Gaps = 16/193 (8%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
            K  ++T +  G G  +A RL  +G +V+   +    V     +   RG+ +      ++
Sbjct: 2   SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLT 61

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAA---ANPSVDSILQTKESVLDKLWDINVKSSILL 128
           +   R             +DV+++NA    A   VD  ++    ++ +L++ NV   + L
Sbjct: 62  DAIDRAQAAEW------DVDVLLNNAGIGEAGAVVDIPVE----LVRELFETNVFGPLEL 111

Query: 129 LQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVN 185
            Q     +  +    VV  SS+AG         Y  +K AL  + +A+ AE+ P   +V 
Sbjct: 112 TQGFVRKMVARGKGKVVFTSSMAGLITGPFTGAYCASKHALEAIAEAMHAELKPFGIQVA 171

Query: 186 CVAPGFVPTHFAE 198
            V PG   T F +
Sbjct: 172 TVNPGPYLTGFND 184

Length = 257

>gnl|CDD|236173 PRK08177, PRK08177, short chain dehydrogenase; Provisional

 Score = 44.6 bits (106), Expect = 1e-05
 Identities = 48/187 (25%), Positives = 81/187 (43%), Gaps = 14/187 (7%)

Query: 14  VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNG 73
             I+ AS +G+G G+ +RL   G  V  + R  +  D A+  L    IE + +    S  
Sbjct: 4   ALIIGAS-RGLGLGLVDRLLERGWQVTATVRGPQQ-DTALQALPGVHIEKLDMNDPASLD 61

Query: 74  QQRKNLINQTIEKFGKIDVVVSNAA-ANPSVDSILQTKESVLDKLWDINVKSSILLLQDA 132
           Q  + L  Q        D++  NA  + P+  S      + + +L+  N  + I L +  
Sbjct: 62  QLLQRLQGQR------FDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRL 115

Query: 133 APHLQKGSSVV-LISSIAG---YQPQSSMAMYGVTKTALLGLTKALAAEMA-PDTRVNCV 187
              ++ G  V+  +SS  G         M +Y  +K AL  +T++  AE+  P   V  +
Sbjct: 116 LGQVRPGQGVLAFMSSQLGSVELPDGGEMPLYKASKAALNSMTRSFVAELGEPTLTVLSM 175

Query: 188 APGFVPT 194
            PG+V T
Sbjct: 176 HPGWVKT 182

Length = 225

>gnl|CDD|180399 PRK06101, PRK06101, short chain dehydrogenase; Provisional

 Score = 44.5 bits (105), Expect = 1e-05
 Identities = 43/184 (23%), Positives = 78/184 (42%), Gaps = 13/184 (7%)

Query: 14  VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNG 73
             ++T +T GIG  +A     +G  V+   R Q  +DE   +  +  I  +     V++ 
Sbjct: 3   AVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ--SANIFTLAF--DVTDH 58

Query: 74  QQRKNLINQTIEKFGKI-DVVVSNAAANPSVDS-ILQTKESVLDKLWDINVKSSILLLQD 131
              K      + +   I ++ + NA     +D   +     ++ +++++NV      ++ 
Sbjct: 59  PGTK----AALSQLPFIPELWIFNAGDCEYMDDGKVDAT--LMARVFNVNVLGVANCIEG 112

Query: 132 AAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNCVAPG 190
             PHL  G  VV++ SIA          YG +K A+    + L  ++ P    V  V PG
Sbjct: 113 IQPHLSCGHRVVIVGSIASELALPRAEAYGASKAAVAYFARTLQLDLRPKGIEVVTVFPG 172

Query: 191 FVPT 194
           FV T
Sbjct: 173 FVAT 176

Length = 240

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 44.8 bits (106), Expect = 1e-05
 Identities = 48/196 (24%), Positives = 90/196 (45%), Gaps = 16/196 (8%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGAS---VVVSSR---KQKNVDEAVVKLKARGIEVIGV 66
            V ++T  + GIG  +A RL  + +    V  + R   K+  + EA   L    +E + +
Sbjct: 1   TVVLITGCSSGIGLHLAVRLASDPSKRFKVYATMRDLKKKGRLWEAAGALAGGTLETLQL 60

Query: 67  -VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSS 125
            VC   +       +         +DV+V NA     +  +    E  +  ++D+NV  +
Sbjct: 61  DVCDSKSVAAAVERV-----TERHVDVLVCNAGVG-LLGPLEALSEDAMASVFDVNVFGT 114

Query: 126 ILLLQDAAPHLQKGSS--VVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DT 182
           + +LQ   P +++  S  +++ SS+ G Q      +Y  +K AL GL ++LA ++ P + 
Sbjct: 115 VRMLQAFLPDMKRRGSGRILVTSSVGGLQGLPFNDVYCASKFALEGLCESLAVQLLPFNV 174

Query: 183 RVNCVAPGFVPTHFAE 198
            ++ +  G V T F E
Sbjct: 175 HLSLIECGPVHTAFME 190

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|181020 PRK07533, PRK07533, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 44.5 bits (106), Expect = 1e-05
 Identities = 50/205 (24%), Positives = 89/205 (43%), Gaps = 17/205 (8%)

Query: 4   MKMAKRFQGKVAIVT--ASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI 61
           M+      GK  +V   A+ Q I +G A      GA + V+    K      V+  A  +
Sbjct: 2   MQPLLPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKA--RPYVEPLAEEL 59

Query: 62  EV-IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLD----- 115
           +  I +   V    Q + +  +  E++G++D ++ + A  P  D  L  +  V+D     
Sbjct: 60  DAPIFLPLDVREPGQLEAVFARIAEEWGRLDFLLHSIAFAPKED--LHGR--VVDCSREG 115

Query: 116 --KLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKA 173
                D++  S I + + A P +  G S++ +S     +   +  + G  K AL    + 
Sbjct: 116 FALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEKVVENYNLMGPVKAALESSVRY 175

Query: 174 LAAEMAP-DTRVNCVAPGFVPTHFA 197
           LAAE+ P   RV+ ++PG + T  A
Sbjct: 176 LAAELGPKGIRVHAISPGPLKTRAA 200

Length = 258

>gnl|CDD|181260 PRK08159, PRK08159, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 44.0 bits (104), Expect = 2e-05
 Identities = 51/197 (25%), Positives = 85/197 (43%), Gaps = 21/197 (10%)

Query: 11  QGKVAIV--TASTQGIGFGIAERLGLEGASVVVSSRK---QKNVDEAVVKLKARGIEVIG 65
            GK  ++   A+ + I +GIA+     GA +  + +    +K V+    +L   G  V G
Sbjct: 9   AGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAEL---GAFVAG 65

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSI----LQTKESVLDKLWDIN 121
             C V++      +     +K+GK+D VV +A      D +    + T         DI+
Sbjct: 66  H-CDVTDEASIDAVFETLEKKWGKLDFVV-HAIGFSDKDELTGRYVDTSRDNFTMTMDIS 123

Query: 122 VKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMY---GVTKTALLGLTKALAAEM 178
           V S   + Q A   +  G S++ ++    Y  +  M  Y   GV K AL    K LA ++
Sbjct: 124 VYSFTAVAQRAEKLMTDGGSILTLTY---YGAEKVMPHYNVMGVAKAALEASVKYLAVDL 180

Query: 179 APD-TRVNCVAPGFVPT 194
            P   RVN ++ G + T
Sbjct: 181 GPKNIRVNAISAGPIKT 197

Length = 272

>gnl|CDD|187535 cd02266, SDR, Short-chain dehydrogenases/reductases (SDR)

 Score = 43.3 bits (102), Expect = 2e-05
 Identities = 29/113 (25%), Positives = 47/113 (41%), Gaps = 4/113 (3%)

Query: 89  KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSS--VVLIS 146
           + DVVV + AA      ++    S +++    NV  +  LL+ A   ++       +LIS
Sbjct: 31  RRDVVV-HNAAILDDGRLIDLTGSRIERAIRANVVGTRRLLEAARELMKAKRLGRFILIS 89

Query: 147 SIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RVNCVAPGFVPTHFAE 198
           S+AG      +  Y  +K AL GL +  A+E   +      VA G        
Sbjct: 90  SVAGLFGAPGLGGYAASKAALDGLAQQWASEGWGNGLPATAVACGTWAGSGMA 142

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase (KR) domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 186

>gnl|CDD|212496 cd11730, Tthb094_like_SDR_c, Tthb094 and related proteins, classical (c) SDRs

 Score = 43.3 bits (102), Expect = 3e-05
 Identities = 40/185 (21%), Positives = 73/185 (39%), Gaps = 17/185 (9%)

Query: 15  AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQ 74
           A++  +T GIG  +A  L   G  +++S R     D   +   A  +  +     V+   
Sbjct: 1   ALILGATGGIGRALARALAGRGWRLLLSGR-----DAGALAGLAAEVGALARPADVAAEL 55

Query: 75  QRKNLINQTIEKFGKIDVVVSNAAA---NPSVDSILQTKESVLDKLWDINVKSSILLLQD 131
           +   L     ++ G +D++V  A A    P       TK +   ++ D N+  + L+L+ 
Sbjct: 56  EVWALA----QELGPLDLLVYAAGAILGKPLAR----TKPAAWRRILDANLTGAALVLKH 107

Query: 132 AAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGF 191
           A   L  G+ +V + +         ++ Y   K AL    +    E+    R+  V P  
Sbjct: 108 ALALLAAGARLVFLGAYPELVMLPGLSAYAAAKAALEAYVEVARKEVR-GLRLTLVRPPA 166

Query: 192 VPTHF 196
           V T  
Sbjct: 167 VDTGL 171

Tthb094 from Thermus Thermophilus is a classical SDR which binds NADP. Members of this subgroup contain the YXXXK active site characteristic of SDRs. Also, an upstream Asn residue of the canonical catalytic tetrad is partially conserved in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 206

>gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional

 Score = 43.5 bits (103), Expect = 3e-05
 Identities = 40/204 (19%), Positives = 87/204 (42%), Gaps = 20/204 (9%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVV-VSSRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
           +  I+T ++QG+G  IA +L  +G  V+ +S  + K + +     +     +      + 
Sbjct: 2   RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLA---EQYNSNLTFHSLDLQ 58

Query: 72  NGQQRKNLINQTIEKFGKIDV----VVSNAAANPSVDSILQTKESVLDKL---WDINVKS 124
           +  + +   N+ +    + +V    +++NA     V  I   +++  ++L     +N+ +
Sbjct: 59  DVHELETNFNEILSSIQEDNVSSIHLINNAGM---VAPIKPIEKAESEELITNVHLNLLA 115

Query: 125 SILLLQDAAPHLQ--KGS-SVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD 181
            ++L      H +  K    V+ ISS A   P    + Y  +K  L   T+ +A E   +
Sbjct: 116 PMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFGWSAYCSSKAGLDMFTQTVATEQEEE 175

Query: 182 T---RVNCVAPGFVPTHFAEYITS 202
               ++   +PG + T+    I S
Sbjct: 176 EYPVKIVAFSPGVMDTNMQAQIRS 199

Length = 251

>gnl|CDD|180669 PRK06720, PRK06720, hypothetical protein; Provisional

 Score = 42.7 bits (100), Expect = 3e-05
 Identities = 35/109 (32%), Positives = 55/109 (50%), Gaps = 5/109 (4%)

Query: 3   KMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIE 62
           KMK+A    GKVAIVT    GIG   A  L  +GA V+V+   Q++    V ++   G E
Sbjct: 11  KMKLA----GKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGE 66

Query: 63  VIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKE 111
            + V   +      + +I+ T+  F +ID++  NA     +DSI   ++
Sbjct: 67  ALFVSYDMEKQGDWQRVISITLNAFSRIDMLFQNAGLY-KIDSIFSRQQ 114

Length = 169

>gnl|CDD|235627 PRK05854, PRK05854, short chain dehydrogenase; Provisional

 Score = 43.5 bits (103), Expect = 3e-05
 Identities = 17/48 (35%), Positives = 28/48 (58%)

Query: 12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR 59
          GK A+VT ++ G+G G+A RL   GA V++  R +   + AV  ++  
Sbjct: 14 GKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTA 61

Length = 313

>gnl|CDD|233441 TIGR01500, sepiapter_red, sepiapterin reductase

 Score = 43.0 bits (101), Expect = 4e-05
 Identities = 47/200 (23%), Positives = 83/200 (41%), Gaps = 21/200 (10%)

Query: 14  VAIVTASTQGIGFGIAE----RLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVV 67
           V +VT +++G G  IA+     L   G+ +V+S+R  + + +   ++ A   G+ V+ V 
Sbjct: 2   VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVS 61

Query: 68  CHVSNGQQRKNLINQTIEKFGKID----VVVSNAAANPSV----DSILQTKESVLDKLWD 119
             +      + L+    E          ++++NA     V      +  + +  +   W 
Sbjct: 62  LDLGAEAGLEQLLKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQ--VQNYWA 119

Query: 120 INVKSSILLLQDAAPHLQKGSS----VVLISSIAGYQPQSSMAMYGVTKTALLGLTKALA 175
           +N+ S + L        +        VV ISS+   QP    A+Y   K A   L + LA
Sbjct: 120 LNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKGWALYCAGKAARDMLFQVLA 179

Query: 176 AE-MAPDTRVNCVAPGFVPT 194
            E   P+ RV   APG + T
Sbjct: 180 LEEKNPNVRVLNYAPGVLDT 199

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. Length = 256

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 42.4 bits (100), Expect = 6e-05
 Identities = 45/191 (23%), Positives = 80/191 (41%), Gaps = 24/191 (12%)

Query: 14  VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCHVSN 72
           + +VT +T G G  I  R   +G  V+ + R+Q+ + E    LK   G  +      V N
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQE----LKDELGDNLYIAQLDVRN 57

Query: 73  GQQRKNLINQTIEKFGKIDVVVSNA--------AANPSVDSILQTKESVLDKLWDINVKS 124
               + ++     ++  IDV+V+NA        A   SV+          + + D N K 
Sbjct: 58  RAAIEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVED--------WETMIDTNNKG 109

Query: 125 SILLLQDAAPHLQKGS--SVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEM-APD 181
            + + +   P + + +   ++ I S AG  P +   +YG TK  +   +  L  ++    
Sbjct: 110 LVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTA 169

Query: 182 TRVNCVAPGFV 192
            RV  + PG V
Sbjct: 170 VRVTDIEPGLV 180

Length = 248

>gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs

 Score = 42.1 bits (99), Expect = 8e-05
 Identities = 47/211 (22%), Positives = 74/211 (35%), Gaps = 58/211 (27%)

Query: 16  IVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQ 75
           ++T +  GIG   AE L   G +V+    ++ +V                 +  +S  + 
Sbjct: 3   VITGAASGIGAATAELLEDAGHTVIGIDLREADV-----------------IADLSTPEG 45

Query: 76  RKNLINQTIEKFGK-IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAP 134
           R   I   + +    +D +V+ A    +  + L  K         +N      L++   P
Sbjct: 46  RAAAIADVLARCSGVLDGLVNCAGVGGTTVAGLVLK---------VNYFGLRALMEALLP 96

Query: 135 HLQKGS--SVVLISSIAGYQ---------------------------PQSSMAMYGVTKT 165
            L+KG   + V++SSIAG                              Q     Y  +K 
Sbjct: 97  RLRKGHGPAAVVVSSIAGAGWAQDKLELAKALAAGTEARAVALAEHAGQPGYLAYAGSKE 156

Query: 166 ALLGLTKALAAEMAPD--TRVNCVAPGFVPT 194
           AL   T+  AA        RVN VAPG V T
Sbjct: 157 ALTVWTRRRAATWLYGAGVRVNTVAPGPVET 187

Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 42.4 bits (100), Expect = 9e-05
 Identities = 35/149 (23%), Positives = 59/149 (39%), Gaps = 15/149 (10%)

Query: 12  GKVAIVTASTQGIGFGIAERL-GLEGASVVVSSRKQKNVDE-----AVVKLKARGIEVIG 65
           G V +VT    GIG  +A  L    GA +V+  R     +E      +  L+A G  V+ 
Sbjct: 205 GGVYLVTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAALEALGARVLY 264

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSS 125
           +   V++    + L+ +  E++G ID V+  A        + Q      + +    V   
Sbjct: 265 ISADVTDAAAVRRLLEKVRERYGAIDGVIHAAGVLRD-ALLAQKTAEDFEAVLAPKVDGL 323

Query: 126 ILLLQ---DAAPHLQKGSSVVLISSIAGY 151
           + L Q   D           VL SS++ +
Sbjct: 324 LNLAQALADEPLDF-----FVLFSSVSAF 347

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional

 Score = 41.8 bits (99), Expect = 1e-04
 Identities = 47/189 (24%), Positives = 83/189 (43%), Gaps = 11/189 (5%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG-IEVIGVVCHV 70
            KV I  AS+ GIG  +A     +GA++ + +R+   +     +L     + V      V
Sbjct: 3   LKVFITGASS-GIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAA--DV 59

Query: 71  SNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKE--SVLDKLWDINVKSSILL 128
            +           I   G  DVV++NA    SV ++ + +E  +V  ++ D N    +  
Sbjct: 60  RDADALAAAAADFIAAHGLPDVVIANAGI--SVGTLTEEREDLAVFREVMDTNYFGMVAT 117

Query: 129 LQD--AAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVN 185
            Q   A     +  ++V I+S+AG +       Y  +K A +   ++L  E+ P   RV 
Sbjct: 118 FQPFIAPMRAARRGTLVGIASVAGVRGLPGAGAYSASKAAAIKYLESLRVELRPAGVRVV 177

Query: 186 CVAPGFVPT 194
            +APG++ T
Sbjct: 178 TIAPGYIRT 186

Length = 257

>gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional

 Score = 41.5 bits (98), Expect = 1e-04
 Identities = 49/200 (24%), Positives = 85/200 (42%), Gaps = 32/200 (16%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHV 70
           K+ I  AS+ G+G G+A     +G  + + +R+   ++E   +L AR  GI+V      V
Sbjct: 4   KILITGASS-GLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDV 62

Query: 71  SNGQQRKNLINQTIEKFGKIDVVVSNAA-------------ANPSVDSILQTKESVL-DK 116
           ++  Q   +  +  ++ G +D V+ NA              AN        T E+     
Sbjct: 63  NDHDQVFEVFAEFRDELGGLDRVIVNAGIGKGARLGTGKFWAN------KATAETNFVAA 116

Query: 117 LWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP-QSSMAMYGVTKTALLGLTKALA 175
           L        I   Q +  HL      VLISS++  +      A Y  +K  +  L + L 
Sbjct: 117 LAQCEAAMEIFREQGSG-HL------VLISSVSAVRGLPGVKAAYAASKAGVASLGEGLR 169

Query: 176 AEMA-PDTRVNCVAPGFVPT 194
           AE+A    +V+ + PG++ +
Sbjct: 170 AELAKTPIKVSTIEPGYIRS 189

Length = 248

>gnl|CDD|236057 PRK07578, PRK07578, short chain dehydrogenase; Provisional

 Score = 40.6 bits (96), Expect = 2e-04
 Identities = 41/157 (26%), Positives = 64/157 (40%), Gaps = 16/157 (10%)

Query: 52  AVVKLKARGIEVIGVVCHVSNGQQR-----KNLINQTIEKFGKIDVVVSNAAANPSVDSI 106
           AVV   ++  EVI      S+G  +        I    EK GK+D VVS AA       +
Sbjct: 15  AVVAELSKRHEVITA--GRSSGDVQVDITDPASIRALFEKVGKVDAVVS-AAGKVHFAPL 71

Query: 107 LQTKESVLDKLWDINVKSSIL----LLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGV 162
            +  +      +++ ++S ++    L+     +L  G S  L S I   +P    A    
Sbjct: 72  AEMTDE----DFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEPIPGGASAAT 127

Query: 163 TKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEY 199
              AL G  KA A E+    R+N V+P  +     +Y
Sbjct: 128 VNGALEGFVKAAALELPRGIRINVVSPTVLTESLEKY 164

Length = 199

>gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs

 Score = 40.3 bits (94), Expect = 4e-04
 Identities = 17/42 (40%), Positives = 22/42 (52%)

Query: 12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAV 53
          GKV I+T +  GIGF  A    L GA V+++ R       AV
Sbjct: 1  GKVIIITGANSGIGFETARSFALHGAHVILACRNMSRASAAV 42

Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284

>gnl|CDD|180796 PRK07023, PRK07023, short chain dehydrogenase; Provisional

 Score = 40.0 bits (94), Expect = 4e-04
 Identities = 48/208 (23%), Positives = 84/208 (40%), Gaps = 35/208 (16%)

Query: 15  AIVTASTQGIGFGIAERLGLEGASVVVSSRK--------------QKNVDEAVVKLKARG 60
           AIVT  ++G+G  +AE+L   G +V+  +R               +  +D +     A  
Sbjct: 4   AIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSLAAAAGERLAEVELDLSDAAAAAAW 63

Query: 61  IEVIGVVCHVSNGQQRKNLINQ--TIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLW 118
           +    ++    +G  R  LIN   T+E  G +  + + A A  +V               
Sbjct: 64  LAG-DLLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIA-RAVG-------------- 107

Query: 119 DINVKSSILLLQDAAPHLQKGSS--VVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAA 176
            +NV + ++L    A      +   ++ ISS A     +  ++Y  TK AL    +A+A 
Sbjct: 108 -LNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAGWSVYCATKAALDHHARAVAL 166

Query: 177 EMAPDTRVNCVAPGFVPTHFAEYITSND 204
           +     R+  +APG V T     I + D
Sbjct: 167 DANRALRIVSLAPGVVDTGMQATIRATD 194

Length = 243

>gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional

 Score = 40.0 bits (94), Expect = 5e-04
 Identities = 49/190 (25%), Positives = 80/190 (42%), Gaps = 13/190 (6%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           +  ++T  + GIG   A  L  +G  V  + RK    +E V  L+A G+E        + 
Sbjct: 5   RSILITGCSSGIGAYCARALQSDGWRVFATCRK----EEDVAALEAEGLEAF--QLDYAE 58

Query: 73  GQQRKNLINQTIEKF-GKIDVVVSNAA-ANPSVDSILQTKESVLDKLWDINVKSSILLLQ 130
            +    L+ Q +E   G++D + +N A   P     L T+   L   ++ N      L +
Sbjct: 59  PESIAALVAQVLELSGGRLDALFNNGAYGQPGAVEDLPTE--ALRAQFEANFFGWHDLTR 116

Query: 131 DAAPHLQKGSS--VVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMA-PDTRVNCV 187
              P ++K     +V  SSI G  P      Y  +K A+ GL+  L  E+      V+ +
Sbjct: 117 RVIPVMRKQGQGRIVQCSSILGLVPMKYRGAYNASKFAIEGLSLTLRMELQGSGIHVSLI 176

Query: 188 APGFVPTHFA 197
            PG + T F 
Sbjct: 177 EPGPIETRFR 186

Length = 277

>gnl|CDD|235527 PRK05599, PRK05599, hypothetical protein; Provisional

 Score = 38.3 bits (89), Expect = 0.001
 Identities = 49/201 (24%), Positives = 79/201 (39%), Gaps = 33/201 (16%)

Query: 16  IVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC-HVSNGQ 74
           ++   T  I   IA  L   G  VV+++R+ +        L+ RG   + V+     +  
Sbjct: 4   LILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLD 62

Query: 75  QRKNLINQTIEKFGKIDVVV----------------SNAAANPSVDSILQTKESVLDKLW 118
             + L+ QT E  G+I + V                ++A    +VD   Q   S+L  L 
Sbjct: 63  THRELVKQTQELAGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQV--SMLTVLA 120

Query: 119 DINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEM 178
           D       L  Q A       +++V  SSIAG++ + +  +YG TK  L    + LA  +
Sbjct: 121 DE------LRAQTAP------AAIVAFSSIAGWRARRANYVYGSTKAGLDAFCQGLADSL 168

Query: 179 -APDTRVNCVAPGFVPTHFAE 198
                R+    PGFV      
Sbjct: 169 HGSHVRLIIARPGFVIGSMTT 189

Length = 246

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 38.4 bits (89), Expect = 0.002
 Identities = 43/190 (22%), Positives = 62/190 (32%), Gaps = 34/190 (17%)

Query: 16  IVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQ 75
           +VT     IG  + ERL   G  V         +D     L      V  VV  +++   
Sbjct: 4   LVTGGAGFIGSHLVERLLAAGHDVRG-------LDRLRDGLDPLLSGVEFVVLDLTDRDL 56

Query: 76  RKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPH 135
              L        G  D V+ + AA  SV     +  S   +  D+NV  ++ LL+ A   
Sbjct: 57  VDELAK------GVPDAVI-HLAAQSSVP---DSNASDPAEFLDVNVDGTLNLLEAARAA 106

Query: 136 LQKGSSVVLISSIAGY-------------QPQSSMAMYGVTKTALLGLTKALAAEMAPDT 182
             K    V  SS++                P   +  YGV+K  L       A       
Sbjct: 107 GVKR--FVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSK--LAAEQLLRAYARLYGL 162

Query: 183 RVNCVAPGFV 192
            V  + P  V
Sbjct: 163 PVVILRPFNV 172

Length = 314

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score = 38.2 bits (89), Expect = 0.002
 Identities = 50/236 (21%), Positives = 94/236 (39%), Gaps = 42/236 (17%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAV--VKLKARGIEVIGVVCH 69
           GK  I+T +  GIG   A  L   GA V+++ R     +EA   ++      EVI     
Sbjct: 1   GKTVIITGANTGIGKETARELARRGARVIMACRDMAKCEEAAAEIRRDTLNHEVIVRHLD 60

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWD----INVKSS 125
           +++ +  +    + + +  ++DV+++NA        +++   S  +  ++    +N    
Sbjct: 61  LASLKSIRAFAAEFLAEEDRLDVLINNAG-------VMRCPYSKTEDGFEMQFGVNHLGH 113

Query: 126 ILL-------LQDAAPHLQKGSSVVLISSIAGY------------QPQSSMAMYGVTKTA 166
            LL       L+ +AP     S +V +SS+A              +  ++   Y  +K A
Sbjct: 114 FLLTNLLLDLLKKSAP-----SRIVNVSSLAHKAGKINFDDLNSEKSYNTGFAYCQSKLA 168

Query: 167 LLGLTKALAAEM-APDTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSL 221
            +  T+ LA  +      VN + PG V T    +     G+     S  L+P    
Sbjct: 169 NVLFTRELARRLQGTGVTVNALHPGVVRTELGRHT----GIHHLFLSTLLNPLFWP 220

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional

 Score = 37.7 bits (88), Expect = 0.003
 Identities = 52/217 (23%), Positives = 80/217 (36%), Gaps = 60/217 (27%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
           GK AIVT    G+G      L   GA V+V +R+     EA+  +   G+EV        
Sbjct: 26  GKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGI--DGVEV-------- 75

Query: 72  NGQQRKNL-----INQTIEKFG----KIDVVVSNAAANPSVDSILQTKESVLDKLWD--- 119
                 +L     +    E+F     +ID++++NA        ++   E+ +   W+   
Sbjct: 76  ---VMLDLADLESVRAFAERFLDSGRRIDILINNAG-------VMACPETRVGDGWEAQF 125

Query: 120 -INVKSSILLLQDAAPHLQKGSS--VVLISSIA---------------GYQPQSSMAMYG 161
             N      L+    P L  G+   VV +SS                 GY    +   YG
Sbjct: 126 ATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRGYDKWLA---YG 182

Query: 162 VTKTA----LLGLTKALAAEMAPDTRVNCVAPGFVPT 194
            +KTA     + L K L  +     R   V PG + T
Sbjct: 183 QSKTANALFAVHLDK-LGKDQ--GVRAFSVHPGGILT 216

Length = 315

>gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional

 Score = 37.3 bits (87), Expect = 0.003
 Identities = 16/47 (34%), Positives = 26/47 (55%)

Query: 12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA 58
          G+VA+VT +  G+G+  A  L  +GA VV++ R       A  ++ A
Sbjct: 16 GRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITA 62

Length = 306

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	226
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	100.0
COG0300	265	DltE Short-chain dehydrogenases of various substra	100.0
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	100.0
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08339	263	short chain dehydrogenase; Provisional	100.0
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	100.0
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	100.0
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	100.0
PRK08589	272	short chain dehydrogenase; Validated	100.0
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07478	254	short chain dehydrogenase; Provisional	100.0
PRK07063	260	short chain dehydrogenase; Provisional	100.0
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK05867	253	short chain dehydrogenase; Provisional	100.0
KOG0725	270	consensus Reductases with broad range of substrate	100.0
PRK07062	265	short chain dehydrogenase; Provisional	100.0
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	100.0
PRK08303	305	short chain dehydrogenase; Provisional	100.0
PRK07791	286	short chain dehydrogenase; Provisional	100.0
PRK06139	330	short chain dehydrogenase; Provisional	100.0
PRK12747	252	short chain dehydrogenase; Provisional	100.0
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
PRK07985	294	oxidoreductase; Provisional	100.0
PRK05872	296	short chain dehydrogenase; Provisional	100.0
PRK06128	300	oxidoreductase; Provisional	100.0
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	100.0
PRK08277	278	D-mannonate oxidoreductase; Provisional	100.0
PRK06114	254	short chain dehydrogenase; Provisional	100.0
PRK08085	254	gluconate 5-dehydrogenase; Provisional	100.0
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK05876	275	short chain dehydrogenase; Provisional	100.0
PRK08265	261	short chain dehydrogenase; Provisional	100.0
PRK06172	253	short chain dehydrogenase; Provisional	100.0
PRK07035	252	short chain dehydrogenase; Provisional	100.0
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	100.0
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	100.0
PRK08862	227	short chain dehydrogenase; Provisional	100.0
PRK07523	255	gluconate 5-dehydrogenase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK06398	258	aldose dehydrogenase; Validated	100.0
PRK08340	259	glucose-1-dehydrogenase; Provisional	100.0
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	100.0
PRK08936	261	glucose-1-dehydrogenase; Provisional	100.0
PRK05599	246	hypothetical protein; Provisional	100.0
PRK07109	334	short chain dehydrogenase; Provisional	100.0
PRK07097	265	gluconate 5-dehydrogenase; Provisional	100.0
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK08643	256	acetoin reductase; Validated	100.0
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK07677	252	short chain dehydrogenase; Provisional	100.0
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	100.0
PRK06125	259	short chain dehydrogenase; Provisional	100.0
PRK09242	257	tropinone reductase; Provisional	100.0
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	100.0
PRK07831	262	short chain dehydrogenase; Provisional	100.0
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	100.0
PLN02253	280	xanthoxin dehydrogenase	100.0
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	100.0
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	100.0
PRK06124	256	gluconate 5-dehydrogenase; Provisional	100.0
PRK06940	275	short chain dehydrogenase; Provisional	100.0
PRK07856	252	short chain dehydrogenase; Provisional	100.0
PRK08278	273	short chain dehydrogenase; Provisional	100.0
PRK05717	255	oxidoreductase; Validated	100.0
PRK06701	290	short chain dehydrogenase; Provisional	100.0
PRK07576	264	short chain dehydrogenase; Provisional	100.0
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12743	256	oxidoreductase; Provisional	100.0
PRK08628	258	short chain dehydrogenase; Provisional	100.0
PRK06483	236	dihydromonapterin reductase; Provisional	100.0
PRK07814	263	short chain dehydrogenase; Provisional	100.0
PRK07890	258	short chain dehydrogenase; Provisional	100.0
PLN02780	320	ketoreductase/ oxidoreductase	100.0
PRK07825	273	short chain dehydrogenase; Provisional	100.0
PRK05866	293	short chain dehydrogenase; Provisional	100.0
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	100.0
PRK07067	257	sorbitol dehydrogenase; Provisional	100.0
PRK06523	260	short chain dehydrogenase; Provisional	100.0
PRK12744	257	short chain dehydrogenase; Provisional	100.0
PRK05855	582	short chain dehydrogenase; Validated	100.0
PRK06500	249	short chain dehydrogenase; Provisional	100.0
PRK06841	255	short chain dehydrogenase; Provisional	100.0
PRK08226	263	short chain dehydrogenase; Provisional	100.0
PRK12939	250	short chain dehydrogenase; Provisional	100.0
PRK12937	245	short chain dehydrogenase; Provisional	100.0
PRK12938	246	acetyacetyl-CoA reductase; Provisional	100.0
PRK06182	273	short chain dehydrogenase; Validated	100.0
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
TIGR02415	254	23BDH acetoin reductases. One member of this famil	100.0
PRK05650	270	short chain dehydrogenase; Provisional	100.0
PRK06949	258	short chain dehydrogenase; Provisional	100.0
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	100.0
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06194	287	hypothetical protein; Provisional	100.0
PRK07024	257	short chain dehydrogenase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	100.0
PRK05993	277	short chain dehydrogenase; Provisional	100.0
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK05854	313	short chain dehydrogenase; Provisional	100.0
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	100.0
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07832	272	short chain dehydrogenase; Provisional	100.0
PRK08213	259	gluconate 5-dehydrogenase; Provisional	100.0
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	100.0
PRK07454	241	short chain dehydrogenase; Provisional	100.0
PRK12935	247	acetoacetyl-CoA reductase; Provisional	100.0
PRK12746	254	short chain dehydrogenase; Provisional	100.0
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	100.0
PRK12742	237	oxidoreductase; Provisional	100.0
PRK07904	253	short chain dehydrogenase; Provisional	100.0
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	100.0
PRK07774	250	short chain dehydrogenase; Provisional	100.0
PRK05875	276	short chain dehydrogenase; Provisional	100.0
PRK08703	239	short chain dehydrogenase; Provisional	100.0
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	100.0
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PLN00015	308	protochlorophyllide reductase	100.0
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	100.0
PRK09072	263	short chain dehydrogenase; Provisional	100.0
PRK06196	315	oxidoreductase; Provisional	100.0
PRK08267	260	short chain dehydrogenase; Provisional	100.0
PRK06180	277	short chain dehydrogenase; Provisional	100.0
PRK06123	248	short chain dehydrogenase; Provisional	100.0
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	100.0
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	100.0
PRK09186	256	flagellin modification protein A; Provisional	100.0
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06138	252	short chain dehydrogenase; Provisional	100.0
PRK06947	248	glucose-1-dehydrogenase; Provisional	100.0
PRK05884	223	short chain dehydrogenase; Provisional	100.0
PRK08263	275	short chain dehydrogenase; Provisional	100.0
PRK09134	258	short chain dehydrogenase; Provisional	100.0
PRK06179	270	short chain dehydrogenase; Provisional	100.0
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK06198	260	short chain dehydrogenase; Provisional	100.0
PRK06057	255	short chain dehydrogenase; Provisional	100.0
PRK08251	248	short chain dehydrogenase; Provisional	100.0
PRK05693	274	short chain dehydrogenase; Provisional	100.0
KOG1611	249	consensus Predicted short chain-type dehydrogenase	100.0
KOG1208	314	consensus Dehydrogenases with different specificit	100.0
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12827	249	short chain dehydrogenase; Provisional	100.0
PRK06197	306	short chain dehydrogenase; Provisional	100.0
PRK07578	199	short chain dehydrogenase; Provisional	100.0
PRK06181	263	short chain dehydrogenase; Provisional	100.0
PRK12824	245	acetoacetyl-CoA reductase; Provisional	100.0
PRK10538	248	malonic semialdehyde reductase; Provisional	100.0
PRK07069	251	short chain dehydrogenase; Validated	100.0
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06101	240	short chain dehydrogenase; Provisional	100.0
PRK06914	280	short chain dehydrogenase; Provisional	100.0
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	100.0
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	100.0
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07201	657	short chain dehydrogenase; Provisional	100.0
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	100.0
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
COG1028	251	FabG Dehydrogenases with different specificities (	100.0
PRK07775	274	short chain dehydrogenase; Provisional	100.0
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	100.0
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	100.0
PRK07060	245	short chain dehydrogenase; Provisional	100.0
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	100.0
PRK07453	322	protochlorophyllide oxidoreductase; Validated	100.0
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	100.0
PRK07102	243	short chain dehydrogenase; Provisional	100.0
PRK06924	251	short chain dehydrogenase; Provisional	100.0
PRK06482	276	short chain dehydrogenase; Provisional	100.0
PRK07806	248	short chain dehydrogenase; Provisional	100.0
PRK12829	264	short chain dehydrogenase; Provisional	100.0
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	100.0
PRK07041	230	short chain dehydrogenase; Provisional	100.0
PRK07023	243	short chain dehydrogenase; Provisional	100.0
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07577	234	short chain dehydrogenase; Provisional	100.0
PRK08324	681	short chain dehydrogenase; Validated	100.0
PRK07326	237	short chain dehydrogenase; Provisional	100.0
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK09135	249	pteridine reductase; Provisional	100.0
PRK07074	257	short chain dehydrogenase; Provisional	100.0
PRK12828	239	short chain dehydrogenase; Provisional	100.0
PRK09009	235	C factor cell-cell signaling protein; Provisional	100.0
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	100.0
PRK08177	225	short chain dehydrogenase; Provisional	100.0
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	100.0
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	100.0
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	100.0
PRK08264	238	short chain dehydrogenase; Validated	100.0
PRK09291	257	short chain dehydrogenase; Provisional	99.98
PRK08017	256	oxidoreductase; Provisional	99.97
PRK12367	245	short chain dehydrogenase; Provisional	99.97
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	99.97
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.97
PRK06953	222	short chain dehydrogenase; Provisional	99.97
PRK08219	227	short chain dehydrogenase; Provisional	99.96
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.96
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.95
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.95
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.94
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.92
PLN03209	576	translocon at the inner envelope of chloroplast su	99.91
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.91
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.91
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.91
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.89
PRK06720	169	hypothetical protein; Provisional	99.89
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.88
PLN02653	340	GDP-mannose 4,6-dehydratase	99.86
PLN02583	297	cinnamoyl-CoA reductase	99.85
PLN02650	351	dihydroflavonol-4-reductase	99.84
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.84
PLN00198	338	anthocyanidin reductase; Provisional	99.84
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.84
PLN02572	442	UDP-sulfoquinovose synthase	99.83
PLN02214	342	cinnamoyl-CoA reductase	99.82
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.82
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.81
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.8
PLN02240	352	UDP-glucose 4-epimerase	99.79
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.79
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.78
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.78
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.77
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.76
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.76
PLN02686	367	cinnamoyl-CoA reductase	99.75
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.75
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.75
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.74
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.72
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.71
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.71
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.7
PLN02427	386	UDP-apiose/xylose synthase	99.7
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.68
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.68
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	99.65
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.64
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.64
PLN02260	668	probable rhamnose biosynthetic enzyme	99.64
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.63
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.63
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.63
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.62
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.61
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.6
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.59
PLN02206	442	UDP-glucuronate decarboxylase	99.58
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.58
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.55
CHL00194	317	ycf39 Ycf39; Provisional	99.53
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	99.53
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.53
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.5
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.49
PLN02996	491	fatty acyl-CoA reductase	99.48
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.46
PRK07201	657	short chain dehydrogenase; Provisional	99.45
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.4
PLN02778	298	3,5-epimerase/4-reductase	99.39
PRK05865	854	hypothetical protein; Provisional	99.38
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.37
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.37
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.34
PLN02503	605	fatty acyl-CoA reductase 2	99.34
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.32
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.26
PLN02260	668	probable rhamnose biosynthetic enzyme	99.23
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.21
PRK08309	177	short chain dehydrogenase; Provisional	99.2
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.12
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	99.11
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.05
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.01
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	99.0
PLN00016	378	RNA-binding protein; Provisional	98.96
PRK12320	699	hypothetical protein; Provisional	98.96
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.95
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.93
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.83
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	98.81
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	98.8
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	98.79
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.72
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	98.7
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.69
COG4982	866	3-oxoacyl-[acyl-carrier protein]	98.65
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.6
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	98.58
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	98.5
PLN00106	323	malate dehydrogenase	98.41
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.39
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.37
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.34
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.28
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	98.28
PRK09620	229	hypothetical protein; Provisional	98.25
PTZ00325	321	malate dehydrogenase; Provisional	98.23
PRK14982	340	acyl-ACP reductase; Provisional	98.21
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.19
COG2910	211	Putative NADH-flavin reductase [General function p	98.12
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	98.1
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	98.04
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.97
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	97.96
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.95
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.95
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.89
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.86
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	97.83
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.83
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.81
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	97.77
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	97.74
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.73
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	97.68
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.68
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	97.67
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	97.66
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	97.63
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	97.61
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.6
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.58
PRK14968	188	putative methyltransferase; Provisional	97.57
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	97.52
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.51
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	97.5
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.49
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.49
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	97.47
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	97.47
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	97.45
PRK05086	312	malate dehydrogenase; Provisional	97.44
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.43
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.4
PRK06849	389	hypothetical protein; Provisional	97.4
PRK08306	296	dipicolinate synthase subunit A; Reviewed	97.39
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	97.38
COG3268	382	Uncharacterized conserved protein [Function unknow	97.38
COG2130	340	Putative NADP-dependent oxidoreductases [General f	97.36
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	97.36
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	97.34
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	97.32
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.31
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	97.31
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	97.28
KOG2774	366	consensus NAD dependent epimerase [General functio	97.27
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.24
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	97.21
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	97.18
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.18
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	97.17
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	97.16
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	97.16
COG3007	398	Uncharacterized paraquat-inducible protein B [Func	97.16
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	97.13
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	97.11
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	97.1
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	97.1
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	97.04
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	97.02
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	97.01
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.01
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.0
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	97.0
PTZ00075	476	Adenosylhomocysteinase; Provisional	96.99
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	96.98
PLN02494	477	adenosylhomocysteinase	96.95
PRK15116	268	sulfur acceptor protein CsdL; Provisional	96.95
PRK06719	157	precorrin-2 dehydrogenase; Validated	96.94
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.93
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.93
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	96.92
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	96.91
PLN02586	360	probable cinnamyl alcohol dehydrogenase	96.9
PRK09496	453	trkA potassium transporter peripheral membrane com	96.89
PRK08655	437	prephenate dehydrogenase; Provisional	96.89
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	96.87
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.86
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	96.85
PLN00112	444	malate dehydrogenase (NADP); Provisional	96.82
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	96.82
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.82
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.82
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	96.82
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	96.81
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	96.8
PLN02928	347	oxidoreductase family protein	96.79
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	96.79
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.78
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	96.77
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	96.77
TIGR00537	179	hemK_rel_arch HemK-related putative methylase. The	96.76
PLN02178	375	cinnamyl-alcohol dehydrogenase	96.75
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	96.75
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	96.75
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	96.74
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	96.73
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	96.73
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	96.72
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.71
PRK04148	134	hypothetical protein; Provisional	96.71
PLN00203	519	glutamyl-tRNA reductase	96.7
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	96.69
COG0569	225	TrkA K+ transport systems, NAD-binding component [	96.68
PRK14967	223	putative methyltransferase; Provisional	96.66
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	96.66
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	96.65
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	96.63
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	96.63
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	96.63
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.62
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	96.62
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.61
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	96.6
PTZ00117	319	malate dehydrogenase; Provisional	96.6
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	96.57
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	96.56
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.54
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.54
PTZ00354	334	alcohol dehydrogenase; Provisional	96.52
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	96.51
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	96.5
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	96.5
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	96.49
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	96.47
PRK13771	334	putative alcohol dehydrogenase; Provisional	96.45
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	96.44
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.44
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	96.44
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	96.43
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	96.43
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	96.42
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	96.42
PRK05442	326	malate dehydrogenase; Provisional	96.41
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	96.41
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.4
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	96.39
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	96.38
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	96.37
PRK11207	197	tellurite resistance protein TehB; Provisional	96.37
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	96.36
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	96.34
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	96.34
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.34
PLN02740	381	Alcohol dehydrogenase-like	96.33
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	96.32
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	96.31
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	96.29
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	96.28
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	96.28
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	96.27
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	96.25
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.25
PRK09496	453	trkA potassium transporter peripheral membrane com	96.25
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	96.22
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.2
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	96.19
PRK08223	287	hypothetical protein; Validated	96.18
PRK13243	333	glyoxylate reductase; Reviewed	96.17
PRK14179	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.14
COG2263	198	Predicted RNA methylase [Translation, ribosomal st	96.13
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	96.12
PLN02514	357	cinnamyl-alcohol dehydrogenase	96.11
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	96.1
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	96.09
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	96.09
PTZ00082	321	L-lactate dehydrogenase; Provisional	96.08
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	96.06
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.06
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	96.02
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	95.99
PRK12480	330	D-lactate dehydrogenase; Provisional	95.98
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	95.98
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	95.97
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	95.95
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	95.95
KOG2013	603	consensus SMT3/SUMO-activating complex, catalytic	95.94
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.92
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	95.9
PLN03139	386	formate dehydrogenase; Provisional	95.89
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	95.88
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	95.87
PRK12335	287	tellurite resistance protein TehB; Provisional	95.87
PRK14901	434	16S rRNA methyltransferase B; Provisional	95.86

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=100.00  E-value=2.7e-47  Score=296.60  Aligned_cols=214  Identities=27%  Similarity=0.385  Sum_probs=195.8

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      ..++|+++|||||+|||.++++.|++.|++|++++|+.++++.+..++.+  .++.....|++|.++++.+++.+.++++
T Consensus         3 ~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~--~~~~~~~~DVtD~~~~~~~i~~~~~~~g   80 (246)
T COG4221           3 TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA--GAALALALDVTDRAAVEAAIEALPEEFG   80 (246)
T ss_pred             CCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc--CceEEEeeccCCHHHHHHHHHHHHHhhC
Confidence            35679999999999999999999999999999999999999999999875  5788999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhh--cCCEEEEEeccCCcCCCCCCchhhHhHHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~--~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa  166 (226)
                      ++|+||||||... ..++.+.+.++|++++++|+.|.++.+++++|.|.  +.|.||++||.++..++|+.+.|+++|++
T Consensus        81 ~iDiLvNNAGl~~-g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~~vY~ATK~a  159 (246)
T COG4221          81 RIDILVNNAGLAL-GDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKAA  159 (246)
T ss_pred             cccEEEecCCCCc-CChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCCccchhhHHH
Confidence            9999999999997 59999999999999999999999999999999994  46899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC---chhhhhhccCCCCCchhhhccc
Q 027248          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN---DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       167 ~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~---~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +..|++.|+.|+.. +|||..|+||.+.|..+.....+   ....+........+|+++|++|
T Consensus       160 V~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y~~~~~l~p~dIA~~V  222 (246)
T COG4221         160 VRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKVYKGGTALTPEDIAEAV  222 (246)
T ss_pred             HHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCchhhhHHHHhccCCCCCHHHHHHHH
Confidence            99999999999987 99999999999988766655544   2344445677899999999876

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=100.00  E-value=1.2e-45  Score=294.87  Aligned_cols=212  Identities=25%  Similarity=0.401  Sum_probs=193.1

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhc-CCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      ..+|++||||||+|||++++++|+++|++|++++|+++++.++.+++... +.++.++.+|++++++++.+.+++.+..+
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~   83 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGG   83 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCC
Confidence            35799999999999999999999999999999999999999999999876 46789999999999999999999999988


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa  166 (226)
                      .+|+||||||+.. .+++.+.++++.++++++|+.+...++++++|.|.+  .|.||+++|.+++.+.|..+.|++||++
T Consensus        84 ~IdvLVNNAG~g~-~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~~avY~ATKa~  162 (265)
T COG0300          84 PIDVLVNNAGFGT-FGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATKAF  162 (265)
T ss_pred             cccEEEECCCcCC-ccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcchHHHHHHHHH
Confidence            9999999999987 689999999999999999999999999999999954  5899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhcc
Q 027248          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLA  224 (226)
Q Consensus       167 ~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~a  224 (226)
                      +.+|+++|+.|+.+ ||+|.+|+||++.|++++ . ................|+++|+.
T Consensus       163 v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~-~-~~~~~~~~~~~~~~~~~~~va~~  219 (265)
T COG0300         163 VLSFSEALREELKGTGVKVTAVCPGPTRTEFFD-A-KGSDVYLLSPGELVLSPEDVAEA  219 (265)
T ss_pred             HHHHHHHHHHHhcCCCeEEEEEecCcccccccc-c-cccccccccchhhccCHHHHHHH
Confidence            99999999999988 999999999999999987 1 22223333345668889998875

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=6.7e-45  Score=292.58  Aligned_cols=194  Identities=30%  Similarity=0.496  Sum_probs=179.0

Q ss_pred             cccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcC-Cc-EEEEEeeCCCHHHHHHHHHHH
Q 027248            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG-IE-VIGVVCHVSNGQQRKNLINQT   83 (226)
Q Consensus         6 ~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~-~~~~~~Dv~~~~~v~~~~~~~   83 (226)
                      .+.++.||+|+|||||+|||.++|.+|+++|++++++.|+.++++...+++.+.+ .+ +.++++|++|.++++++++++
T Consensus         6 ~~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~   85 (282)
T KOG1205|consen    6 FMERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWA   85 (282)
T ss_pred             cHHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHH
Confidence            3456789999999999999999999999999999999999999999988887763 34 899999999999999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcC--CEEEEEeccCCcCCCCCCchhh
Q 027248           84 IEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKG--SSVVLISSIAGYQPQSSMAMYG  161 (226)
Q Consensus        84 ~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~--~~iv~~sS~~~~~~~~~~~~Y~  161 (226)
                      .+.+|++|+||||||+.. .....+.+.++++++|++|++|+++++++++|+|++.  |+||++||.+|+.+.|..+.|+
T Consensus        86 ~~~fg~vDvLVNNAG~~~-~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~~~Y~  164 (282)
T KOG1205|consen   86 IRHFGRVDVLVNNAGISL-VGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFRSIYS  164 (282)
T ss_pred             HHhcCCCCEEEecCcccc-ccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCcccccc
Confidence            999999999999999987 7788889999999999999999999999999999653  9999999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHhCC-C--eEEEEEecCceeCCcccccc
Q 027248          162 VTKTALLGLTKALAAEMAP-D--TRVNCVAPGFVPTHFAEYIT  201 (226)
Q Consensus       162 ~sKaa~~~~~~~la~e~~~-~--i~v~~v~Pg~v~t~~~~~~~  201 (226)
                      +||+|+.+|+.+|+.|+.+ +  |++ .|+||+|+|++.....
T Consensus       165 ASK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te~~~~~~  206 (282)
T KOG1205|consen  165 ASKHALEGFFETLRQELIPLGTIIII-LVSPGPIETEFTGKEL  206 (282)
T ss_pred             hHHHHHHHHHHHHHHHhhccCceEEE-EEecCceeecccchhh
Confidence            9999999999999999987 5  677 9999999999765543

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=4.8e-44  Score=289.70  Aligned_cols=216  Identities=22%  Similarity=0.262  Sum_probs=185.6

Q ss_pred             ccccCCCEEEEEcCC--CchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHH
Q 027248            7 AKRFQGKVAIVTAST--QGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTI   84 (226)
Q Consensus         7 ~~~~~gk~vlItGa~--~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (226)
                      ...++||+++||||+  +|||++++++|+++|++|++++|+. +.++..+++.  +.++.++++|++++++++++++++.
T Consensus         2 ~~~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~   78 (252)
T PRK06079          2 SGILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLV--DEEDLLVECDVASDESIERAFATIK   78 (252)
T ss_pred             ccccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhc--cCceeEEeCCCCCHHHHHHHHHHHH
Confidence            344689999999999  7999999999999999999999983 4444444443  2357789999999999999999999


Q ss_pred             HHhCCCCEEEEcCCCCCC---CCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhh
Q 027248           85 EKFGKIDVVVSNAAANPS---VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYG  161 (226)
Q Consensus        85 ~~~~~id~li~nag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~  161 (226)
                      ++++++|+||||||+...   ..++.+.+.++|++++++|+.+++.++++++|+|+++++||++||.++..+.+++..|+
T Consensus        79 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~~~~~~Y~  158 (252)
T PRK06079         79 ERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERAIPNYNVMG  158 (252)
T ss_pred             HHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccccCCcchhhH
Confidence            999999999999998642   25678899999999999999999999999999998889999999999988889999999


Q ss_pred             HhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch----hhhhhccCCCCCchhhhccc
Q 027248          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG----VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       162 ~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~----~~~~~~~~~~~~p~~~a~av  225 (226)
                      +||+|+++|+++|+.|+++ ||+||+|+||+|+|++........+    +....+..++.+|+|+|+++
T Consensus       159 asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~  227 (252)
T PRK06079        159 IAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSRTVDGVGVTIEEVGNTA  227 (252)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCChHHHHHHHHhcCcccCCCCHHHHHHHH
Confidence            9999999999999999998 9999999999999998655432222    23344567899999999875

>PRK08339 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.6e-44  Score=290.25  Aligned_cols=216  Identities=22%  Similarity=0.386  Sum_probs=188.8

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhc-CCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      .+++||+++||||++|||++++++|+++|++|++++|++++++...+++.+. +.++.++.+|++++++++.+++++. .
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~-~   82 (263)
T PRK08339          4 IDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELK-N   82 (263)
T ss_pred             cCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHH-h
Confidence            3468999999999999999999999999999999999998888887777654 4568899999999999999999985 5


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhH
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTK  164 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sK  164 (226)
                      +|++|++|||||... ..++.+.+.++|++++++|+.+++.++++++|+|++  .|+||++||..+..+.++...|+++|
T Consensus        83 ~g~iD~lv~nag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~~~~~y~asK  161 (263)
T PRK08339         83 IGEPDIFFFSTGGPK-PGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPNIALSNVVR  161 (263)
T ss_pred             hCCCcEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCCcchhhHHHH
Confidence            899999999999865 567788999999999999999999999999999954  48999999999998889999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCceeCCccccccc----------C---chhhhhhccCCCCCchhhhccc
Q 027248          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS----------N---DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       165 aa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~----------~---~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +|+++|+++|+.|+++ ||+||+|+||+++|++......          +   ..+.+..+.+++.+|+|+|+++
T Consensus       162 aal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v  236 (263)
T PRK08339        162 ISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPEEIGYLV  236 (263)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCCcccCcCHHHHHHHH
Confidence            9999999999999998 9999999999999998654321          0   1123345667889999999875

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.3e-43  Score=290.10  Aligned_cols=216  Identities=20%  Similarity=0.221  Sum_probs=181.1

Q ss_pred             ccCCCEEEEEcCCC--chhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            9 RFQGKVAIVTASTQ--GIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         9 ~~~gk~vlItGa~~--giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      .++||++|||||++  |||++++++|+++|++|++++|+.+..+. .+++.+..+....+++|++++++++.+++++.++
T Consensus         4 ~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~-~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~   82 (271)
T PRK06505          4 LMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKR-VKPLAESLGSDFVLPCDVEDIASVDAVFEALEKK   82 (271)
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHH-HHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHH
Confidence            35789999999996  99999999999999999999998643333 3333322222357899999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCC---CCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHh
Q 027248           87 FGKIDVVVSNAAANPS---VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVT  163 (226)
Q Consensus        87 ~~~id~li~nag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~s  163 (226)
                      +|++|+||||||+...   ..++.+.+.++|++++++|+.++++++++++|+|+++|+||++||..+..+.|++..|++|
T Consensus        83 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~~~~~~~Y~as  162 (271)
T PRK06505         83 WGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRVMPNYNVMGVA  162 (271)
T ss_pred             hCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCccccCCccchhhhh
Confidence            9999999999998642   1467789999999999999999999999999999877899999999998888999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch----hhhhhccCCCCCchhhhccc
Q 027248          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG----VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       164 Kaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~----~~~~~~~~~~~~p~~~a~av  225 (226)
                      |+|+.+|+|+|+.|+++ ||+||+|+||+++|++.........    ..+..+..++..|+|+|.++
T Consensus       163 KaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peeva~~~  229 (271)
T PRK06505        163 KAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDARAIFSYQQRNSPLRRTVTIDEVGGSA  229 (271)
T ss_pred             HHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcchHHHHHHHhhcCCccccCCHHHHHHHH
Confidence            99999999999999998 9999999999999998654322111    12234556788999999865

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2e-43  Score=289.34  Aligned_cols=214  Identities=24%  Similarity=0.287  Sum_probs=180.4

Q ss_pred             cCCCEEEEEcCC--CchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhc-CCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248           10 FQGKVAIVTAST--QGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus        10 ~~gk~vlItGa~--~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      ++||+++||||+  +|||++++++|+++|++|++++|+.+ .++..+++.+. +.. .++.+|+++.++++.+++++.++
T Consensus         3 l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~~   80 (274)
T PRK08415          3 MKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA-LKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLKKD   80 (274)
T ss_pred             cCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH-HHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHHHH
Confidence            468999999997  89999999999999999999999853 22333333222 333 57899999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCC---CCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHh
Q 027248           87 FGKIDVVVSNAAANPS---VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVT  163 (226)
Q Consensus        87 ~~~id~li~nag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~s  163 (226)
                      +|++|+||||||+...   ..++.+.+.++|++++++|+.++++++++++|+|+++++||++||.++..+.+++..|++|
T Consensus        81 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~~~~~~~Y~as  160 (274)
T PRK08415         81 LGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVKYVPHYNVMGVA  160 (274)
T ss_pred             cCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCccCCCcchhhhhH
Confidence            9999999999998532   2567889999999999999999999999999999888999999999998888999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch---h-hhhhccCCCCCchhhhccc
Q 027248          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG---V-VSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       164 Kaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~---~-~~~~~~~~~~~p~~~a~av  225 (226)
                      |+|+.+|+++|+.|+.+ ||+||+|+||+++|++.........   + ....+..++.+|+|+|+++
T Consensus       161 Kaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~r~~~pedva~~v  227 (274)
T PRK08415        161 KAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDFRMILKWNEINAPLKKNVSIEEVGNSG  227 (274)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchhhHHhhhhhhhCchhccCCHHHHHHHH
Confidence            99999999999999998 9999999999999987654321111   1 1234556789999999875

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=5.3e-43  Score=279.37  Aligned_cols=210  Identities=22%  Similarity=0.360  Sum_probs=191.8

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      ..+.+|+++|||||++|||++++.+|+++|+++++.+.+++..++..+++.+.| ++..+.||+++.+++.++.+++.+.
T Consensus        33 ~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g-~~~~y~cdis~~eei~~~a~~Vk~e  111 (300)
T KOG1201|consen   33 LKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIG-EAKAYTCDISDREEIYRLAKKVKKE  111 (300)
T ss_pred             hhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcC-ceeEEEecCCCHHHHHHHHHHHHHh
Confidence            457899999999999999999999999999999999999999999999998775 8999999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhh--cCCEEEEEeccCCcCCCCCCchhhHhH
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTK  164 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~--~~~~iv~~sS~~~~~~~~~~~~Y~~sK  164 (226)
                      .|.+|+||||||+.. .+++.+.+.+++++++++|+.|+|+.+++++|.|.  ++|+||+++|.+|..+.++...|++||
T Consensus       112 ~G~V~ILVNNAGI~~-~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~gl~~YcaSK  190 (300)
T KOG1201|consen  112 VGDVDILVNNAGIVT-GKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAGLADYCASK  190 (300)
T ss_pred             cCCceEEEecccccc-CCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCccchhhhhhH
Confidence            999999999999997 78888999999999999999999999999999994  469999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhC---C-CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhcc
Q 027248          165 TALLGLTKALAAEMA---P-DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLA  224 (226)
Q Consensus       165 aa~~~~~~~la~e~~---~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~a  224 (226)
                      +|+.+|+++|..|+.   . ||+...|+|++++|+|.+.-.+..      ...++.+|+++|+.
T Consensus       191 ~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~~~~~~------~l~P~L~p~~va~~  248 (300)
T KOG1201|consen  191 FAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDGATPFP------TLAPLLEPEYVAKR  248 (300)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCCCCCCc------cccCCCCHHHHHHH
Confidence            999999999999984   3 799999999999999988721111      23467788887764

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=6.6e-43  Score=284.26  Aligned_cols=217  Identities=20%  Similarity=0.224  Sum_probs=182.5

Q ss_pred             cccCCCEEEEEcCCC--chhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248            8 KRFQGKVAIVTASTQ--GIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus         8 ~~~~gk~vlItGa~~--giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      ..++||+++||||++  |||++++++|+++|++|++.+|++ ..++..+++.+..+....+++|++++++++.+++++.+
T Consensus         4 ~~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~   82 (260)
T PRK06603          4 GLLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKE   82 (260)
T ss_pred             cccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHH
Confidence            346799999999997  999999999999999999999874 34444555544322234678999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCC---CCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhH
Q 027248           86 KFGKIDVVVSNAAANPS---VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGV  162 (226)
Q Consensus        86 ~~~~id~li~nag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~  162 (226)
                      ++|++|+||||||+...   ..++.+.+.++|++++++|+.+++.+++++.|+|+++|+||++||..+..+.+++..|++
T Consensus        83 ~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~~~~Y~a  162 (260)
T PRK06603         83 KWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKVIPNYNVMGV  162 (260)
T ss_pred             HcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccccCCCcccchhh
Confidence            99999999999997532   246778899999999999999999999999999987899999999998888899999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCc----hhhhhhccCCCCCchhhhccc
Q 027248          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND----GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       163 sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~----~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ||+|+++|+++|+.|+++ ||+||+|+||+++|++........    ......+..++..|+|+|+++
T Consensus       163 sKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~  230 (260)
T PRK06603        163 AKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAATAPLKRNTTQEDVGGAA  230 (260)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCcHHHHHHHHhcCCcCCCCCHHHHHHHH
Confidence            999999999999999998 999999999999999864332111    122334566788999999875

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1e-42  Score=282.82  Aligned_cols=218  Identities=22%  Similarity=0.262  Sum_probs=182.8

Q ss_pred             ccccCCCEEEEEcCC--CchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHH
Q 027248            7 AKRFQGKVAIVTAST--QGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTI   84 (226)
Q Consensus         7 ~~~~~gk~vlItGa~--~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (226)
                      ..+++||+++||||+  +|||++++++|+++|++|++++|+.+..+ ..+++.+......++.+|++++++++++++++.
T Consensus         5 ~~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   83 (258)
T PRK07533          5 LLPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARP-YVEPLAEELDAPIFLPLDVREPGQLEAVFARIA   83 (258)
T ss_pred             ccccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHH-HHHHHHHhhccceEEecCcCCHHHHHHHHHHHH
Confidence            345789999999998  59999999999999999999999864322 223333222345678999999999999999999


Q ss_pred             HHhCCCCEEEEcCCCCCC---CCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhh
Q 027248           85 EKFGKIDVVVSNAAANPS---VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYG  161 (226)
Q Consensus        85 ~~~~~id~li~nag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~  161 (226)
                      +++|++|+||||||....   ..++.+.+.++|++++++|+.+++++++.++|+|+++++||++||..+..+.++++.|+
T Consensus        84 ~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~~~~~~~~Y~  163 (258)
T PRK07533         84 EEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEKVVENYNLMG  163 (258)
T ss_pred             HHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccccccCCccchhhH
Confidence            999999999999997542   24677889999999999999999999999999998788999999999888888999999


Q ss_pred             HhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCc----hhhhhhccCCCCCchhhhccc
Q 027248          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND----GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       162 ~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~----~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +||+|+.+|+++|+.|+.+ ||+||+|+||+++|++.+......    ......+..++.+|+|+|.++
T Consensus       164 asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~  232 (258)
T PRK07533        164 PVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALLEDAAERAPLRRLVDIDDVGAVA  232 (258)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcHHHHHHHHhcCCcCCCCCHHHHHHHH
Confidence            9999999999999999998 999999999999999875542211    122334556788999998764

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=100.00  E-value=8e-43  Score=283.49  Aligned_cols=217  Identities=23%  Similarity=0.320  Sum_probs=185.3

Q ss_pred             ccCCCEEEEEcCC--CchhHHHHHHHHhCCCeEEEEecCcc--hHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHH
Q 027248            9 RFQGKVAIVTAST--QGIGFGIAERLGLEGASVVVSSRKQK--NVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTI   84 (226)
Q Consensus         9 ~~~gk~vlItGa~--~giG~a~~~~l~~~g~~v~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (226)
                      +++||+++||||+  +|||++++++|+++|++|++++|+.+  +.++..+++.+.+.++.++++|++++++++++++++.
T Consensus         3 ~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~   82 (258)
T PRK07370          3 DLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIK   82 (258)
T ss_pred             ccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHH
Confidence            4679999999986  89999999999999999998887654  3455566665555556788999999999999999999


Q ss_pred             HHhCCCCEEEEcCCCCCC---CCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhh
Q 027248           85 EKFGKIDVVVSNAAANPS---VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYG  161 (226)
Q Consensus        85 ~~~~~id~li~nag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~  161 (226)
                      +++|++|+||||||+...   ..++.+.+.++|++++++|+.++++++++++|+|+++++||++||..+..+.+++..|+
T Consensus        83 ~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~Y~  162 (258)
T PRK07370         83 QKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVRAIPNYNVMG  162 (258)
T ss_pred             HHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccccccCCcccchhh
Confidence            999999999999997631   25678889999999999999999999999999998889999999999988889999999


Q ss_pred             HhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCc----hhhhhhccCCCCCchhhhccc
Q 027248          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND----GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       162 ~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~----~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +||+|+.+|+++|+.|+.+ ||+||+|+||+++|++.+......    ......+..++.+|+|+|.++
T Consensus       163 asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~  231 (258)
T PRK07370        163 VAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGILDMIHHVEEKAPLRRTVTQTEVGNTA  231 (258)
T ss_pred             HHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccchhhhhhhhhcCCcCcCCCHHHHHHHH
Confidence            9999999999999999998 999999999999999864432111    122234556788999999865

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=9.6e-43  Score=282.88  Aligned_cols=217  Identities=21%  Similarity=0.268  Sum_probs=182.9

Q ss_pred             ccccCCCEEEEEcCC--CchhHHHHHHHHhCCCeEEEEecCcc---hHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHH
Q 027248            7 AKRFQGKVAIVTAST--QGIGFGIAERLGLEGASVVVSSRKQK---NVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLIN   81 (226)
Q Consensus         7 ~~~~~gk~vlItGa~--~giG~a~~~~l~~~g~~v~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   81 (226)
                      +.+++||+++||||+  +|||++++++|+++|++|++++|+..   .+++..+++.  +.++.++.+|++++++++.+++
T Consensus         2 ~~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~   79 (257)
T PRK08594          2 MLSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLE--GQESLLLPCDVTSDEEITACFE   79 (257)
T ss_pred             ccccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcC--CCceEEEecCCCCHHHHHHHHH
Confidence            346789999999997  89999999999999999999987642   3333333332  4567889999999999999999


Q ss_pred             HHHHHhCCCCEEEEcCCCCCC---CCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCc
Q 027248           82 QTIEKFGKIDVVVSNAAANPS---VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMA  158 (226)
Q Consensus        82 ~~~~~~~~id~li~nag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~  158 (226)
                      ++.+++|++|+||||||+...   ..++.+.+.++|.+++++|+.++++++++++|+|+++|+||++||..+..+.+++.
T Consensus        80 ~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~  159 (257)
T PRK08594         80 TIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERVVQNYN  159 (257)
T ss_pred             HHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCccCCCCCc
Confidence            999999999999999997632   24677889999999999999999999999999998789999999999988889999


Q ss_pred             hhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCc----hhhhhhccCCCCCchhhhccc
Q 027248          159 MYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND----GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       159 ~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~----~~~~~~~~~~~~~p~~~a~av  225 (226)
                      .|++||+|+++|+++|+.|+++ ||+||+|+||+++|++.+......    ......+..++.+|+|+|+++
T Consensus       160 ~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~~~  231 (257)
T PRK08594        160 VMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFNSILKEIEERAPLRRTTTQEEVGDTA  231 (257)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccccHHHHHHhhcCCccccCCHHHHHHHH
Confidence            9999999999999999999998 999999999999999754331111    122333556789999999864

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-42  Score=280.19  Aligned_cols=214  Identities=26%  Similarity=0.447  Sum_probs=186.8

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      +++||+++||||++|||++++++|+++|++|++++|+..  +...+++.+.+.++.++.+|++++++++++++++.+.++
T Consensus         5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   82 (251)
T PRK12481          5 DLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMG   82 (251)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcC
Confidence            467999999999999999999999999999999988642  344455555567788999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc---CCEEEEEeccCCcCCCCCCchhhHhHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKT  165 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~---~~~iv~~sS~~~~~~~~~~~~Y~~sKa  165 (226)
                      ++|+||||||+.. ..++.+.+.++|++++++|+.+++.++++++|+|++   +++||++||..+..+.++...|++||+
T Consensus        83 ~iD~lv~~ag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asK~  161 (251)
T PRK12481         83 HIDILINNAGIIR-RQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASKS  161 (251)
T ss_pred             CCCEEEECCCcCC-CCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCCcchHHHHH
Confidence            9999999999875 567788899999999999999999999999999853   379999999999888888999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCc----hhhhhhccCCCCCchhhhccc
Q 027248          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND----GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       166 a~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~----~~~~~~~~~~~~~p~~~a~av  225 (226)
                      |+++|+++++.|+.+ ||+||+|+||+++|++.+.+....    .....++..++.+|+|+|+++
T Consensus       162 a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~peeva~~~  226 (251)
T PRK12481        162 AVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEAILERIPASRWGTPDDLAGPA  226 (251)
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            999999999999988 999999999999999876653221    233445667889999999875

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.1e-42  Score=280.51  Aligned_cols=215  Identities=19%  Similarity=0.246  Sum_probs=181.5

Q ss_pred             cCCCEEEEEcCCC--chhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248           10 FQGKVAIVTASTQ--GIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus        10 ~~gk~vlItGa~~--giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      ++||+++||||++  |||+++++.|+++|++|++++|+ ++.++..+++....+...++.+|++++++++++++++.+++
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVW   82 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc-hhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhc
Confidence            5689999999986  99999999999999999999987 34555566665554556788999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCC----CccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHh
Q 027248           88 GKIDVVVSNAAANPSV----DSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVT  163 (226)
Q Consensus        88 ~~id~li~nag~~~~~----~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~s  163 (226)
                      |++|+||||||+....    ..+.+.+.++|++++++|+.+++.+++++.|.++++++||++||..+..+.+++..|++|
T Consensus        83 g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~~~~~~~~Y~as  162 (262)
T PRK07984         83 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLA  162 (262)
T ss_pred             CCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCCCCCCcchhHHH
Confidence            9999999999975421    125677899999999999999999999999988777899999999988888999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC----chhhhhhccCCCCCchhhhccc
Q 027248          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN----DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       164 Kaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~----~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      |+|+++|+++|+.|+.+ ||+||+|+||+++|++.......    .......+..++..|+|+|.++
T Consensus       163 Kaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~  229 (262)
T PRK07984        163 KASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSA  229 (262)
T ss_pred             HHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCchHHHHHHHHHcCCCcCCCCHHHHHHHH
Confidence            99999999999999998 99999999999999875432111    1122234557889999999864

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.8e-42  Score=279.98  Aligned_cols=215  Identities=19%  Similarity=0.230  Sum_probs=180.6

Q ss_pred             cCCCEEEEEcC--CCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248           10 FQGKVAIVTAS--TQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus        10 ~~gk~vlItGa--~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      ++||+++||||  ++|||++++++|+++|++|++++|+. +.++..+++.+..+....+++|++++++++++++++.+++
T Consensus         4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   82 (261)
T PRK08690          4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHW   82 (261)
T ss_pred             cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHh
Confidence            57899999997  67999999999999999999988863 4444555554443445678999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCC----CccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc-CCEEEEEeccCCcCCCCCCchhhH
Q 027248           88 GKIDVVVSNAAANPSV----DSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-GSSVVLISSIAGYQPQSSMAMYGV  162 (226)
Q Consensus        88 ~~id~li~nag~~~~~----~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~-~~~iv~~sS~~~~~~~~~~~~Y~~  162 (226)
                      +++|+||||||+....    ..+.+.+.++|++++++|+.+++++++++.|.|++ +++||++||..+..+.|++..|++
T Consensus        83 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~~~~~~~~Y~a  162 (261)
T PRK08690         83 DGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAIPNYNVMGM  162 (261)
T ss_pred             CCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccccccCCCCcccchh
Confidence            9999999999986421    12456788999999999999999999999999854 479999999999888899999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch----hhhhhccCCCCCchhhhccc
Q 027248          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG----VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       163 sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~----~~~~~~~~~~~~p~~~a~av  225 (226)
                      ||+|+.+|++.|+.|+.+ ||+||+|+||+++|++.+.......    +....+..++.+|+|+|.++
T Consensus       163 sKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v  230 (261)
T PRK08690        163 AKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPLRRNVTIEEVGNTA  230 (261)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCchHHHHHHHhhcCCCCCCCCHHHHHHHH
Confidence            999999999999999998 9999999999999998765432122    22334567789999999875

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=100.00  E-value=3.5e-43  Score=262.67  Aligned_cols=214  Identities=27%  Similarity=0.390  Sum_probs=194.6

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      +..|.++||||++|||+++++.|++.|++|++.+++....++....+... .+...|.||++++.+++..+++..+.+|+
T Consensus        12 ~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~-~~h~aF~~DVS~a~~v~~~l~e~~k~~g~   90 (256)
T KOG1200|consen   12 LMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGY-GDHSAFSCDVSKAHDVQNTLEEMEKSLGT   90 (256)
T ss_pred             HhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCC-CccceeeeccCcHHHHHHHHHHHHHhcCC
Confidence            45699999999999999999999999999999999998887777777654 35667899999999999999999999999


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhh--hc--CCEEEEEeccCCcCCCCCCchhhHhHH
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHL--QK--GSSVVLISSIAGYQPQSSMAMYGVTKT  165 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l--~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKa  165 (226)
                      +++||||||+.. ...+...+.++|+.++.+|+.|.|+++|++...|  .+  +.+||++||.-+..+..+.+.|++||+
T Consensus        91 psvlVncAGItr-D~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQtnYAAsK~  169 (256)
T KOG1200|consen   91 PSVLVNCAGITR-DGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQTNYAASKG  169 (256)
T ss_pred             CcEEEEcCcccc-ccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccchhhhhhcC
Confidence            999999999987 6778889999999999999999999999999875  22  349999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC--chhhhhhccCCCCCchhhhccc
Q 027248          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN--DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       166 a~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ++.+|+|+.++|+++ +||||.|+||+|.|||.+...++  +.....++-+++..|||+|..|
T Consensus       170 GvIgftktaArEla~knIrvN~VlPGFI~tpMT~~mp~~v~~ki~~~iPmgr~G~~EevA~~V  232 (256)
T KOG1200|consen  170 GVIGFTKTAARELARKNIRVNVVLPGFIATPMTEAMPPKVLDKILGMIPMGRLGEAEEVANLV  232 (256)
T ss_pred             ceeeeeHHHHHHHhhcCceEeEeccccccChhhhhcCHHHHHHHHccCCccccCCHHHHHHHH
Confidence            999999999999998 99999999999999999988665  4466788999999999999876

>PRK08589 short chain dehydrogenase; Validated

Probab=100.00  E-value=9e-42  Score=279.28  Aligned_cols=216  Identities=27%  Similarity=0.417  Sum_probs=189.3

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      .++||+++||||++|||++++++|+++|++|++++|+ ++++...+++.+.+.++.++.+|++++++++.+++++.+.++
T Consensus         3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   81 (272)
T PRK08589          3 RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFG   81 (272)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            3578999999999999999999999999999999999 777777888877677788999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc-CCEEEEEeccCCcCCCCCCchhhHhHHHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-GSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~-~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~  167 (226)
                      ++|+||||||+.....++.+.+.++|++++++|+.+++.++++++|+|++ +++||++||..+..+.++...|++||+|+
T Consensus        82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaal  161 (272)
T PRK08589         82 RVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQAADLYRSGYNAAKGAV  161 (272)
T ss_pred             CcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhcCCCCCCchHHHHHHHH
Confidence            99999999998653456778899999999999999999999999999854 58999999999998888999999999999


Q ss_pred             HHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch------hh----hhhccCCCCCchhhhccc
Q 027248          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG------VV----SSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       168 ~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~------~~----~~~~~~~~~~p~~~a~av  225 (226)
                      ++|+++|+.|+.+ ||+||+|+||+++|++.+.......      +.    ...+..++.+|+|+|+++
T Consensus       162 ~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~  230 (272)
T PRK08589        162 INFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKPEEVAKLV  230 (272)
T ss_pred             HHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccCCCCCCcCHHHHHHHH
Confidence            9999999999988 9999999999999998765432111      11    123456788999999865

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5.2e-42  Score=280.70  Aligned_cols=215  Identities=20%  Similarity=0.260  Sum_probs=179.7

Q ss_pred             cCCCEEEEEcCC--CchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248           10 FQGKVAIVTAST--QGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus        10 ~~gk~vlItGa~--~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      ++||+++||||+  +|||++++++|+++|++|++++|+. ...+..+++.+.......+++|++++++++++++++.+++
T Consensus         8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~-~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   86 (272)
T PRK08159          8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGD-ALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKW   86 (272)
T ss_pred             ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCch-HHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhc
Confidence            568999999997  8999999999999999999998863 2233333343332335578999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCC---CCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHhH
Q 027248           88 GKIDVVVSNAAANPS---VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTK  164 (226)
Q Consensus        88 ~~id~li~nag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  164 (226)
                      +++|+||||||+...   ..++.+.+.++|++++++|+.++++++++++|+|+++|+||++||.++..+.|++..|++||
T Consensus        87 g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~p~~~~Y~asK  166 (272)
T PRK08159         87 GKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKVMPHYNVMGVAK  166 (272)
T ss_pred             CCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccccCCCcchhhhhHH
Confidence            999999999998642   24677889999999999999999999999999998789999999998888889999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchh----hhhhccCCCCCchhhhccc
Q 027248          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGV----VSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       165 aa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~----~~~~~~~~~~~p~~~a~av  225 (226)
                      +|+.+|+++|+.|+.+ ||+||+|+||+++|++.+........    ....+..++.+|+|+|+++
T Consensus       167 aal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~~  232 (272)
T PRK08159        167 AALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIEEVGDSA  232 (272)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcchHHHHHHHhCCcccccCCHHHHHHHH
Confidence            9999999999999998 99999999999999876433211111    1134556788999999864

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=6e-42  Score=278.66  Aligned_cols=215  Identities=20%  Similarity=0.223  Sum_probs=176.7

Q ss_pred             cCCCEEEEEcC--CCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248           10 FQGKVAIVTAS--TQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus        10 ~~gk~vlItGa--~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      ++||+++||||  ++|||++++++|+++|++|++++|... .++..+++.+.......+.+|++++++++++++++.+++
T Consensus         4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   82 (260)
T PRK06997          4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDR-FKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHW   82 (260)
T ss_pred             cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchH-HHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHh
Confidence            57899999996  689999999999999999999876522 122233333222233468899999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCC----CccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHh
Q 027248           88 GKIDVVVSNAAANPSV----DSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVT  163 (226)
Q Consensus        88 ~~id~li~nag~~~~~----~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~s  163 (226)
                      |++|+||||||+....    ..+.+.+.++|++++++|+.++++++++++|+|+++++||++||..+..+.+++..|++|
T Consensus        83 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~~~~~~~~Y~as  162 (260)
T PRK06997         83 DGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERVVPNYNTMGLA  162 (260)
T ss_pred             CCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccccCCCCcchHHHH
Confidence            9999999999986421    124567889999999999999999999999999777999999999998888899999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCc----hhhhhhccCCCCCchhhhccc
Q 027248          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND----GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       164 Kaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~----~~~~~~~~~~~~~p~~~a~av  225 (226)
                      |+|+++|+++|+.|+++ ||+||+|+||+++|++........    ......+.+++.+|+|+|.++
T Consensus       163 Kaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~  229 (260)
T PRK06997        163 KASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDFGKILDFVESNAPLRRNVTIEEVGNVA  229 (260)
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccchhhHHHHHHhcCcccccCCHHHHHHHH
Confidence            99999999999999998 999999999999999765432211    122334567789999999875

>PRK07478 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-41  Score=275.72  Aligned_cols=217  Identities=28%  Similarity=0.444  Sum_probs=190.7

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      ++++|+++||||++|||++++++|+++|++|++++|++++++...+++.+.+.++.++.+|++++++++++++++.++++
T Consensus         3 ~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (254)
T PRK07478          3 RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFG   82 (254)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            46789999999999999999999999999999999999998888888877777888999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCc-CCCCCCchhhHhHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGY-QPQSSMAMYGVTKT  165 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~-~~~~~~~~Y~~sKa  165 (226)
                      ++|+||||||+.....++.+.+.++|++++++|+.+++.++++++|.|++  .++||++||..+. .+.++...|++||+
T Consensus        83 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~  162 (254)
T PRK07478         83 GLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMAAYAASKA  162 (254)
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCCCCcchhHHHHH
Confidence            99999999998643467788899999999999999999999999999854  4789999999876 46788999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchh----hhhhccCCCCCchhhhccc
Q 027248          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGV----VSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       166 a~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~----~~~~~~~~~~~p~~~a~av  225 (226)
                      |+++++++|+.|+.+ ||+||+|+||+++|++.+........    ....+..++.+|+|+|+++
T Consensus       163 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~  227 (254)
T PRK07478        163 GLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHALKRMAQPEEIAQAA  227 (254)
T ss_pred             HHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            999999999999988 99999999999999987655332221    2223456788999999864

>PRK07063 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.8e-42  Score=278.00  Aligned_cols=217  Identities=27%  Similarity=0.415  Sum_probs=190.6

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHh--cCCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA--RGIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      .+++||+++||||++|||++++++|+++|++|++++|+++++++..+++.+  .+.++.++.+|++++++++.+++++.+
T Consensus         3 ~~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   82 (260)
T PRK07063          3 NRLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEE   82 (260)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999999888888888876  455788999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHh
Q 027248           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVT  163 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~s  163 (226)
                      .++++|+||||||... ..+..+.+.++|++++++|+.++++++++++|.|++  .++||++||..+..+.++...|++|
T Consensus        83 ~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  161 (260)
T PRK07063         83 AFGPLDVLVNNAGINV-FADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGCFPYPVA  161 (260)
T ss_pred             HhCCCcEEEECCCcCC-CCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCCchHHHHH
Confidence            9999999999999865 455667889999999999999999999999999954  4799999999998888999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC----c----hhhhhhccCCCCCchhhhccc
Q 027248          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN----D----GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       164 Kaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~----~----~~~~~~~~~~~~~p~~~a~av  225 (226)
                      |+|+++|+++|+.|+++ ||+||+|+||+++|++.+.....    .    ......+..++.+|+|+|.++
T Consensus       162 Kaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~va~~~  232 (260)
T PRK07063        162 KHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPMKRIGRPEEVAMTA  232 (260)
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence            99999999999999998 99999999999999987653211    1    122334567789999999865

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1e-41  Score=276.71  Aligned_cols=214  Identities=22%  Similarity=0.231  Sum_probs=177.4

Q ss_pred             cccCCCEEEEEcC--CCchhHHHHHHHHhCCCeEEEEecCc--chHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHH
Q 027248            8 KRFQGKVAIVTAS--TQGIGFGIAERLGLEGASVVVSSRKQ--KNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQT   83 (226)
Q Consensus         8 ~~~~gk~vlItGa--~~giG~a~~~~l~~~g~~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   83 (226)
                      .+++||+++||||  ++|||++++++|+++|++|++++|+.  +.+++..+++   +.++.++.+|++++++++.+++++
T Consensus         3 ~~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~i~~~~~~~   79 (256)
T PRK07889          3 GLLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRL---PEPAPVLELDVTNEEHLASLADRV   79 (256)
T ss_pred             ccccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhc---CCCCcEEeCCCCCHHHHHHHHHHH
Confidence            4578999999999  89999999999999999999999864  2334443333   235678899999999999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCC---CCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchh
Q 027248           84 IEKFGKIDVVVSNAAANPS---VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMY  160 (226)
Q Consensus        84 ~~~~~~id~li~nag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y  160 (226)
                      .++++++|+||||||+...   ..++.+.+.++|++++++|+.++++++++++|+|+++++||++||.. ..+.+.+..|
T Consensus        80 ~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~-~~~~~~~~~Y  158 (256)
T PRK07889         80 REHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDA-TVAWPAYDWM  158 (256)
T ss_pred             HHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeecc-cccCCccchh
Confidence            9999999999999998642   13567888999999999999999999999999998788999998764 4566788899


Q ss_pred             hHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch----hhhhhccC-CCCCchhhhccc
Q 027248          161 GVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG----VVSSVSSL-KLSPPSSLTLAV  225 (226)
Q Consensus       161 ~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~----~~~~~~~~-~~~~p~~~a~av  225 (226)
                      ++||+|+++|+++|+.|+.+ ||+||+|+||+++|++.+.......    +....+.. ++.+|+|+|+++
T Consensus       159 ~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~~p~evA~~v  229 (256)
T PRK07889        159 GVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGFELLEEGWDERAPLGWDVKDPTPVARAV  229 (256)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCcHHHHHHHHhcCccccccCCHHHHHHHH
Confidence            99999999999999999988 9999999999999998665432111    12223334 578999999865

>PRK05867 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-41  Score=275.14  Aligned_cols=216  Identities=29%  Similarity=0.426  Sum_probs=188.6

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      +++||+++||||++|||++++++|+++|++|++++|+.++++...+++...+.++..+.+|++++++++++++++.+.++
T Consensus         6 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   85 (253)
T PRK05867          6 DLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELG   85 (253)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            57899999999999999999999999999999999999988888888877777788999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc---CCEEEEEeccCCcCCC-C-CCchhhHh
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQ-S-SMAMYGVT  163 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~---~~~iv~~sS~~~~~~~-~-~~~~Y~~s  163 (226)
                      ++|+||||||... ..++.+.+.++|++++++|+.+++.+++++.|.|.+   +++||++||..+.... + +...|++|
T Consensus        86 ~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~Y~as  164 (253)
T PRK05867         86 GIDIAVCNAGIIT-VTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCAS  164 (253)
T ss_pred             CCCEEEECCCCCC-CCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCCCccchHHH
Confidence            9999999999875 567788899999999999999999999999999854   3689999998876432 3 45789999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC-chhhhhhccCCCCCchhhhccc
Q 027248          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN-DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       164 Kaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      |+|+++|+++|+.|+.+ ||+||+|+||+++|++.+..... ..+.+..+..++.+|+|+|+++
T Consensus       165 Kaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~r~~~p~~va~~~  228 (253)
T PRK05867        165 KAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYTEYQPLWEPKIPLGRLGRPEELAGLY  228 (253)
T ss_pred             HHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccchHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            99999999999999998 99999999999999987654221 1223345667889999999875

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=100.00  E-value=3e-41  Score=274.34  Aligned_cols=219  Identities=39%  Similarity=0.579  Sum_probs=189.5

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCC---cEEEEEeeCCCHHHHHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI---EVIGVVCHVSNGQQRKNLINQT   83 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~Dv~~~~~v~~~~~~~   83 (226)
                      ...+.||+++|||+++|||+++|++|++.|++|++++|++++++....++...+.   ++..+.||++++++++++++..
T Consensus         3 ~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~   82 (270)
T KOG0725|consen    3 GGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFA   82 (270)
T ss_pred             CccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHH
Confidence            4568999999999999999999999999999999999999999998888876644   5899999999999999999999


Q ss_pred             HHH-hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHH-HHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCC-c
Q 027248           84 IEK-FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVK-SSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSM-A  158 (226)
Q Consensus        84 ~~~-~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~-~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~-~  158 (226)
                      .++ +|++|+||||||......++.+.+.++|++++++|+. +.+.+.+.+.|++++  ++.|+++||..+..+.++. .
T Consensus        83 ~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~~~~  162 (270)
T KOG0725|consen   83 VEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPGSGV  162 (270)
T ss_pred             HHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCcc
Confidence            998 7999999999999875558999999999999999999 577777888888865  5789999999888776555 7


Q ss_pred             hhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC---ch------hhhhhccCCCCCchhhhccc
Q 027248          159 MYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN---DG------VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       159 ~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~---~~------~~~~~~~~~~~~p~~~a~av  225 (226)
                      +|+++|+|+++|+|+++.|+.+ |||||+|+||.+.|++.......   ..      .....+.+++..|+|+|.++
T Consensus       163 ~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p~gr~g~~~eva~~~  239 (270)
T KOG0725|consen  163 AYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVPLGRVGTPEEVAEAA  239 (270)
T ss_pred             cchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhccccccccCCccCHHHHHHhH
Confidence            9999999999999999999999 99999999999999982212111   11      22345788899999998764

>PRK07062 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-41  Score=275.03  Aligned_cols=219  Identities=25%  Similarity=0.387  Sum_probs=191.2

Q ss_pred             cccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcC--CcEEEEEeeCCCHHHHHHHHHHH
Q 027248            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG--IEVIGVVCHVSNGQQRKNLINQT   83 (226)
Q Consensus         6 ~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~   83 (226)
                      |..+++||+++||||++|||++++++|+++|++|++++|++++++...+++.+..  .++.++.+|++++++++++++++
T Consensus         2 ~~~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   81 (265)
T PRK07062          2 MQIQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAV   81 (265)
T ss_pred             CccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHH
Confidence            4557889999999999999999999999999999999999988888877776653  46788999999999999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhh
Q 027248           84 IEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYG  161 (226)
Q Consensus        84 ~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~  161 (226)
                      .+.++++|+||||||... ..++.+.+.++|++.+++|+.+++.+++.++|.|++  .++||++||..+..+.++...|+
T Consensus        82 ~~~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~  160 (265)
T PRK07062         82 EARFGGVDMLVNNAGQGR-VSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPHMVATS  160 (265)
T ss_pred             HHhcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCCCchHhH
Confidence            999999999999999865 567888999999999999999999999999999965  47999999999998889999999


Q ss_pred             HhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCccccccc----C----chh------hhhhccCCCCCchhhhccc
Q 027248          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS----N----DGV------VSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       162 ~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~----~----~~~------~~~~~~~~~~~p~~~a~av  225 (226)
                      ++|+|+++|+++|+.|+.+ ||+||+|+||+++|++......    .    ...      ...++..++.+|+|+|+++
T Consensus       161 asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~~~  239 (265)
T PRK07062        161 AARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLGRLGRPDEAARAL  239 (265)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCcCCCCCHHHHHHHH
Confidence            9999999999999999988 9999999999999998653221    0    000      1234556788999999764

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=100.00  E-value=2.3e-41  Score=279.38  Aligned_cols=218  Identities=21%  Similarity=0.237  Sum_probs=180.7

Q ss_pred             ccccCCCEEEEEcC--CCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhc----------CC---cEEEEEeeC-
Q 027248            7 AKRFQGKVAIVTAS--TQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR----------GI---EVIGVVCHV-   70 (226)
Q Consensus         7 ~~~~~gk~vlItGa--~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~----------~~---~~~~~~~Dv-   70 (226)
                      .++++||+++||||  ++|||+++++.|++.|++|++ +|+.++++....++.+.          +.   ....+.+|+ 
T Consensus         4 ~~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   82 (303)
T PLN02730          4 PIDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAV   82 (303)
T ss_pred             CcCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeeccee
Confidence            34589999999999  899999999999999999998 88888888777666421          11   135678898 


Q ss_pred             -CC------------------HHHHHHHHHHHHHHhCCCCEEEEcCCCCCC-CCccccccHHHHHHHHHHHHHHHHHHHH
Q 027248           71 -SN------------------GQQRKNLINQTIEKFGKIDVVVSNAAANPS-VDSILQTKESVLDKLWDINVKSSILLLQ  130 (226)
Q Consensus        71 -~~------------------~~~v~~~~~~~~~~~~~id~li~nag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~  130 (226)
                       ++                  +++++.+++++.+++|++|+||||||.... ..++.+.+.++|++++++|+.+++.+++
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~  162 (303)
T PLN02730         83 FDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQ  162 (303)
T ss_pred             cCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence             43                  348999999999999999999999986431 3678899999999999999999999999


Q ss_pred             HHhhhhhcCCEEEEEeccCCcCCCCCC-chhhHhHHHHHHHHHHHHHHhC-C-CeEEEEEecCceeCCcccccccCchh-
Q 027248          131 DAAPHLQKGSSVVLISSIAGYQPQSSM-AMYGVTKTALLGLTKALAAEMA-P-DTRVNCVAPGFVPTHFAEYITSNDGV-  206 (226)
Q Consensus       131 ~~~~~l~~~~~iv~~sS~~~~~~~~~~-~~Y~~sKaa~~~~~~~la~e~~-~-~i~v~~v~Pg~v~t~~~~~~~~~~~~-  206 (226)
                      +++|+|+++|+||++||..+..+.|++ ..|++||+|+++|+++|+.|++ + ||+||+|+||+++|+|.+.....+.. 
T Consensus       163 ~~~p~m~~~G~II~isS~a~~~~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~  242 (303)
T PLN02730        163 HFGPIMNPGGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAIGFIDDMI  242 (303)
T ss_pred             HHHHHHhcCCEEEEEechhhcCCCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhcccccHHHH
Confidence            999999878999999999988887866 4899999999999999999996 3 99999999999999997653211111 


Q ss_pred             ---hhhhccCCCCCchhhhccc
Q 027248          207 ---VSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       207 ---~~~~~~~~~~~p~~~a~av  225 (226)
                         ....+..++..|+|+|.++
T Consensus       243 ~~~~~~~pl~r~~~peevA~~~  264 (303)
T PLN02730        243 EYSYANAPLQKELTADEVGNAA  264 (303)
T ss_pred             HHHHhcCCCCCCcCHHHHHHHH
Confidence               1222445778999998764

>PRK08303 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.9e-41  Score=278.95  Aligned_cols=220  Identities=23%  Similarity=0.315  Sum_probs=180.9

Q ss_pred             cccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCc----------chHHHHHHHHHhcCCcEEEEEeeCCCHHH
Q 027248            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ----------KNVDEAVVKLKARGIEVIGVVCHVSNGQQ   75 (226)
Q Consensus         6 ~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~----------~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   75 (226)
                      |+.+++||+++||||++|||++++++|++.|++|++++|+.          ++++...+++...+.++.++++|++++++
T Consensus         2 ~~~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~   81 (305)
T PRK08303          2 MMKPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQ   81 (305)
T ss_pred             CCcCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence            34568899999999999999999999999999999999984          45566666666666678889999999999


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcC-CCCC---CCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccC
Q 027248           76 RKNLINQTIEKFGKIDVVVSNA-AANP---SVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIA  149 (226)
Q Consensus        76 v~~~~~~~~~~~~~id~li~na-g~~~---~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~  149 (226)
                      ++++++++.+++|++|+||||| |...   ...++.+.+.++|++++++|+.+++.++++++|+|++  +|+||++||..
T Consensus        82 v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~  161 (305)
T PRK08303         82 VRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGT  161 (305)
T ss_pred             HHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCcc
Confidence            9999999999999999999999 7531   1256778889999999999999999999999999954  48999999976


Q ss_pred             CcC---CCCCCchhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCccccccc--Cchh---hhhhc-cCCCCCch
Q 027248          150 GYQ---PQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS--NDGV---VSSVS-SLKLSPPS  219 (226)
Q Consensus       150 ~~~---~~~~~~~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~--~~~~---~~~~~-~~~~~~p~  219 (226)
                      +..   +.++...|++||+|+.+|+++|+.|+++ ||+||+|+||+++|+|......  +..+   ....+ ..+..+|+
T Consensus       162 ~~~~~~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~p~~~~~~~pe  241 (305)
T PRK08303        162 AEYNATHYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVTEENWRDALAKEPHFAISETPR  241 (305)
T ss_pred             ccccCcCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccCccchhhhhccccccccCCCHH
Confidence            543   2345778999999999999999999998 9999999999999998643211  1111   11222 24566899


Q ss_pred             hhhccc
Q 027248          220 SLTLAV  225 (226)
Q Consensus       220 ~~a~av  225 (226)
                      |+|.++
T Consensus       242 evA~~v  247 (305)
T PRK08303        242 YVGRAV  247 (305)
T ss_pred             HHHHHH
Confidence            999865

>PRK07791 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.3e-41  Score=276.64  Aligned_cols=212  Identities=26%  Similarity=0.349  Sum_probs=183.9

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCc---------chHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHH
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ---------KNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLI   80 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~---------~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   80 (226)
                      ++||+++||||++|||++++++|+++|++|++++|+.         +.++...+++...+.++..+.+|+++++++++++
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~   83 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV   83 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence            5789999999999999999999999999999999876         6677777777777778889999999999999999


Q ss_pred             HHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--------CCEEEEEeccCCcC
Q 027248           81 NQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--------GSSVVLISSIAGYQ  152 (226)
Q Consensus        81 ~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--------~~~iv~~sS~~~~~  152 (226)
                      +++.+.++++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|+|++        .++||++||..+..
T Consensus        84 ~~~~~~~g~id~lv~nAG~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~  162 (286)
T PRK07791         84 DAAVETFGGLDVLVNNAGILR-DRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQ  162 (286)
T ss_pred             HHHHHhcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCc
Confidence            999999999999999999875 467888999999999999999999999999999853        26999999999999


Q ss_pred             CCCCCchhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchhhhhhcc--CCCCCchhhhccc
Q 027248          153 PQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSS--LKLSPPSSLTLAV  225 (226)
Q Consensus       153 ~~~~~~~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~--~~~~~p~~~a~av  225 (226)
                      +.++...|++||+|+++|+++|+.|+.+ ||+||+|+|| ++|++......  ........  .+...|+|+|+++
T Consensus       163 ~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~~~~~--~~~~~~~~~~~~~~~pedva~~~  235 (286)
T PRK07791        163 GSVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTETVFA--EMMAKPEEGEFDAMAPENVSPLV  235 (286)
T ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcchhhHH--HHHhcCcccccCCCCHHHHHHHH
Confidence            9999999999999999999999999988 9999999999 79998654321  11111111  2467899998764

>PRK06139 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-40  Score=278.39  Aligned_cols=216  Identities=26%  Similarity=0.339  Sum_probs=189.9

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      .++++|+++||||++|||++++++|+++|++|++++|+++++++..+++.+.+.++.++.+|++++++++++++++.+.+
T Consensus         3 ~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~   82 (330)
T PRK06139          3 GPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFG   82 (330)
T ss_pred             cCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhc
Confidence            45789999999999999999999999999999999999999999888888778888899999999999999999999988


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHH
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKT  165 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKa  165 (226)
                      +++|++|||||+.. ..++.+.+.++|++++++|+.++++++++++|+|++  .++||++||..+..+.|+.+.|++||+
T Consensus        83 g~iD~lVnnAG~~~-~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p~~~~Y~asKa  161 (330)
T PRK06139         83 GRIDVWVNNVGVGA-VGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSASKF  161 (330)
T ss_pred             CCCCEEEECCCcCC-CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCCCchhHHHHHH
Confidence            99999999999875 577889999999999999999999999999999964  479999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC--CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          166 ALLGLTKALAAEMAP--DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       166 a~~~~~~~la~e~~~--~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      |+.+|+++|+.|+.+  +|+|++|+||+++|++.+....... ........+.+|+++|+++
T Consensus       162 al~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~~~-~~~~~~~~~~~pe~vA~~i  222 (330)
T PRK06139        162 GLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANYTG-RRLTPPPPVYDPRRVAKAV  222 (330)
T ss_pred             HHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccccccccc-ccccCCCCCCCHHHHHHHH
Confidence            999999999999975  8999999999999998654211110 1111234577899998864

>PRK12747 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-40  Score=268.57  Aligned_cols=215  Identities=26%  Similarity=0.407  Sum_probs=184.3

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEe-cCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH--
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSS-RKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK--   86 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~--   86 (226)
                      ++||+++||||++|||++++++|+++|++|++.+ |+.++.+....++...+.++..+.+|+++.++++.+++++.+.  
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   81 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence            3589999999999999999999999999998875 5666777777777766677888999999999999999888753  


Q ss_pred             --hC--CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhH
Q 027248           87 --FG--KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGV  162 (226)
Q Consensus        87 --~~--~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~  162 (226)
                        ++  ++|+||||||+.. ..++.+.+.++|++++++|+.+++.++++++|.|++.++||++||..+..+.++...|++
T Consensus        82 ~~~g~~~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  160 (252)
T PRK12747         82 NRTGSTKFDILINNAGIGP-GAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDFIAYSM  160 (252)
T ss_pred             hhcCCCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCCCCchhHHH
Confidence              34  8999999999864 566788899999999999999999999999999987899999999999999899999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchhh---hh-hccCCCCCchhhhccc
Q 027248          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVV---SS-VSSLKLSPPSSLTLAV  225 (226)
Q Consensus       163 sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~---~~-~~~~~~~~p~~~a~av  225 (226)
                      ||+|+++++++|+.|+.+ ||+||+|+||+++|++.+.........   .. .+..++..|+|+|+++
T Consensus       161 sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  228 (252)
T PRK12747        161 TKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTA  228 (252)
T ss_pred             HHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccCHHHHHHHHhcCcccCCCCHHHHHHHH
Confidence            999999999999999988 999999999999999876544332211   11 1346688999999875

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-40  Score=270.41  Aligned_cols=220  Identities=22%  Similarity=0.334  Sum_probs=186.7

Q ss_pred             cccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEec-CcchHHHHHHHHHhc-CCcEEEEEeeCCCHHHHHHHHHHH
Q 027248            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSR-KQKNVDEAVVKLKAR-GIEVIGVVCHVSNGQQRKNLINQT   83 (226)
Q Consensus         6 ~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~   83 (226)
                      |..+++||+++||||++|||++++++|+++|++|++++| +++.++...+++... +.++.++.+|++++++++++++++
T Consensus         2 ~~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   81 (260)
T PRK08416          2 MSNEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKI   81 (260)
T ss_pred             cccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence            456789999999999999999999999999999988875 455666666666543 557889999999999999999999


Q ss_pred             HHHhCCCCEEEEcCCCCC-----CCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCC
Q 027248           84 IEKFGKIDVVVSNAAANP-----SVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSS  156 (226)
Q Consensus        84 ~~~~~~id~li~nag~~~-----~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~  156 (226)
                      .+.++++|+||||||+..     ...++.+.+.++|++++++|+.+++.+++.++|.|++  .++||++||..+..+.++
T Consensus        82 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  161 (260)
T PRK08416         82 DEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIEN  161 (260)
T ss_pred             HHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCCCC
Confidence            999999999999998752     1346677888999999999999999999999999864  479999999998888899


Q ss_pred             CchhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch----hhhhhccCCCCCchhhhccc
Q 027248          157 MAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG----VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       157 ~~~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~----~~~~~~~~~~~~p~~~a~av  225 (226)
                      +..|++||+|+++|+++|+.|+.+ ||+||+|+||+++|++.........    +....+..++.+|+|+|+++
T Consensus       162 ~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~r~~~p~~va~~~  235 (260)
T PRK08416        162 YAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSPLNRMGQPEDLAGAC  235 (260)
T ss_pred             cccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCCHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence            999999999999999999999988 9999999999999998665432222    22233556788999999764

>PRK07985 oxidoreductase; Provisional

Probab=100.00  E-value=2.7e-40  Score=273.42  Aligned_cols=218  Identities=26%  Similarity=0.360  Sum_probs=187.1

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCc--chHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ--KNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      .+++||+++||||++|||++++++|+++|++|++.+|+.  +..++..+.+.+.+.++.++.+|++++++++++++++.+
T Consensus        45 ~~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~  124 (294)
T PRK07985         45 GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHK  124 (294)
T ss_pred             CccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            357899999999999999999999999999999988754  344555555555566788899999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHhHH
Q 027248           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKT  165 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~sKa  165 (226)
                      .++++|++|||||......++.+.+.++|++++++|+.++++++++++|+|+++++||++||..+..+.++...|++||+
T Consensus       125 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~~~~~~Y~asKa  204 (294)
T PRK07985        125 ALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKA  204 (294)
T ss_pred             HhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCCCCcchhHHHHH
Confidence            99999999999997543467888899999999999999999999999999987889999999999988899999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCc----hhhhhhccCCCCCchhhhccc
Q 027248          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND----GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       166 a~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~----~~~~~~~~~~~~~p~~~a~av  225 (226)
                      |+++|++.|+.|+++ ||+||+|+||+++|++........    .+....+..++..|+|+|.++
T Consensus       205 al~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~pedva~~~  269 (294)
T PRK07985        205 AILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVY  269 (294)
T ss_pred             HHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCHHHHHHHhccCCCCCCCCHHHHHHHH
Confidence            999999999999988 999999999999999853221111    123344556788999999875

>PRK05872 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-40  Score=274.89  Aligned_cols=218  Identities=22%  Similarity=0.324  Sum_probs=190.2

Q ss_pred             cccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus         6 ~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      ...+++||+++||||++|||++++++|+++|++|++++|++++++...+++.. +.++..+.+|++++++++++++++.+
T Consensus         3 ~~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~   81 (296)
T PRK05872          3 PMTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG-DDRVLTVVADVTDLAAMQAAAEEAVE   81 (296)
T ss_pred             CCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC-CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            34568899999999999999999999999999999999999888887777643 44567778999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc-CCEEEEEeccCCcCCCCCCchhhHhH
Q 027248           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-GSSVVLISSIAGYQPQSSMAMYGVTK  164 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK  164 (226)
                      .++++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|.+ .++||++||..+..+.++...|++||
T Consensus        82 ~~g~id~vI~nAG~~~-~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  160 (296)
T PRK05872         82 RFGGIDVVVANAGIAS-GGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAAPGMAAYCASK  160 (296)
T ss_pred             HcCCCCEEEECCCcCC-CcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCCCCchHHHHHH
Confidence            9999999999999876 577888999999999999999999999999999854 68999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchh----hhh--hccCCCCCchhhhccc
Q 027248          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGV----VSS--VSSLKLSPPSSLTLAV  225 (226)
Q Consensus       165 aa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~----~~~--~~~~~~~~p~~~a~av  225 (226)
                      +++++|+++|+.|+.+ ||+|++++||+++|++.+........    ...  .+..+..+|+++|+++
T Consensus       161 aal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~i  228 (296)
T PRK05872        161 AGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPWPLRRTTSVEKCAAAF  228 (296)
T ss_pred             HHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHHhhCCCcccCCCCHHHHHHHH
Confidence            9999999999999988 99999999999999987764333111    111  1345678999999875

>PRK06128 oxidoreductase; Provisional

Probab=100.00  E-value=8.4e-40  Score=271.22  Aligned_cols=217  Identities=27%  Similarity=0.412  Sum_probs=188.0

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcc--hHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK--NVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      .++||+++||||++|||++++++|+++|++|+++.++.+  ..+...+.+...+.++.++.+|+++.++++++++++.+.
T Consensus        52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  131 (300)
T PRK06128         52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKE  131 (300)
T ss_pred             ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999887654  344556666666777889999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHhHHH
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa  166 (226)
                      ++++|+||||||......++.+.+.++|++++++|+.++++++++++|+|+++++||++||..+..+.++...|++||+|
T Consensus       132 ~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~asK~a  211 (300)
T PRK06128        132 LGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSPTLLDYASTKAA  211 (300)
T ss_pred             hCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCCCchhHHHHHHH
Confidence            99999999999986445678889999999999999999999999999999888899999999999888999999999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch----hhhhhccCCCCCchhhhccc
Q 027248          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG----VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       167 ~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~----~~~~~~~~~~~~p~~~a~av  225 (226)
                      +++|+++|+.|+.+ ||+||+|+||+++|++.........    +....+..++..|+|+|.++
T Consensus       212 ~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~  275 (300)
T PRK06128        212 IVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSETPMKRPGQPVEMAPLY  275 (300)
T ss_pred             HHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCHHHHHHHhcCCCCCCCcCHHHHHHHH
Confidence            99999999999988 9999999999999998643221111    22334556788999998764

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=100.00  E-value=8.1e-40  Score=265.00  Aligned_cols=214  Identities=25%  Similarity=0.450  Sum_probs=185.5

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      +++||+++||||++|||++++++|+++|++|++++++..  ++..+++.+.+.++..+++|+++.++++++++++.++++
T Consensus         7 ~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   84 (253)
T PRK08993          7 SLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFG   84 (253)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            478999999999999999999999999999998887643  344555555566788899999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc---CCEEEEEeccCCcCCCCCCchhhHhHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKT  165 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~---~~~iv~~sS~~~~~~~~~~~~Y~~sKa  165 (226)
                      ++|++|||||+.. ..++.+.+.++|++++++|+.+++.+++++.|.|.+   +++||++||..+..+.++...|++||+
T Consensus        85 ~~D~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKa  163 (253)
T PRK08993         85 HIDILVNNAGLIR-REDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKS  163 (253)
T ss_pred             CCCEEEECCCCCC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCCcchHHHHH
Confidence            9999999999865 466778899999999999999999999999999853   379999999999888888999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCc----hhhhhhccCCCCCchhhhccc
Q 027248          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND----GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       166 a~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~----~~~~~~~~~~~~~p~~~a~av  225 (226)
                      |+++++++++.|+.+ ||+||+|+||+++|++........    .+....+..++.+|+|+|.++
T Consensus       164 a~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~  228 (253)
T PRK08993        164 GVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPV  228 (253)
T ss_pred             HHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            999999999999998 999999999999999876543221    233455667899999999864

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=100.00  E-value=9.1e-40  Score=268.02  Aligned_cols=222  Identities=26%  Similarity=0.409  Sum_probs=192.9

Q ss_pred             cccccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHH
Q 027248            4 MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQT   83 (226)
Q Consensus         4 ~~~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   83 (226)
                      |.++.++++|+++||||++|||++++++|+++|++|++++|+.+..+...+++.+.+.++.++++|++++++++.+++++
T Consensus         2 ~~~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   81 (278)
T PRK08277          2 MPNLFSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQI   81 (278)
T ss_pred             CCceeccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHH
Confidence            44455788999999999999999999999999999999999988888888888776677889999999999999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCC--------------CccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEec
Q 027248           84 IEKFGKIDVVVSNAAANPSV--------------DSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISS  147 (226)
Q Consensus        84 ~~~~~~id~li~nag~~~~~--------------~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS  147 (226)
                      .++++++|++|||||.....              .++.+.+.++|++++++|+.+++.++++++|.|++  .++||++||
T Consensus        82 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS  161 (278)
T PRK08277         82 LEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISS  161 (278)
T ss_pred             HHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcc
Confidence            99999999999999965321              24677889999999999999999999999999854  479999999


Q ss_pred             cCCcCCCCCCchhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCc---------hhhhhhccCCCCC
Q 027248          148 IAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND---------GVVSSVSSLKLSP  217 (226)
Q Consensus       148 ~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~---------~~~~~~~~~~~~~  217 (226)
                      ..+..+.++...|++||+|+++|+++++.|+.+ ||+||+|+||+++|++.+......         ......+..++.+
T Consensus       162 ~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~  241 (278)
T PRK08277        162 MNAFTPLTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAHTPMGRFGK  241 (278)
T ss_pred             chhcCCCCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHhccCCccCCCC
Confidence            999999999999999999999999999999998 999999999999999865543211         1223345667889


Q ss_pred             chhhhccc
Q 027248          218 PSSLTLAV  225 (226)
Q Consensus       218 p~~~a~av  225 (226)
                      |+|+|+++
T Consensus       242 ~~dva~~~  249 (278)
T PRK08277        242 PEELLGTL  249 (278)
T ss_pred             HHHHHHHH
Confidence            99999875

>PRK06114 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.9e-40  Score=264.57  Aligned_cols=216  Identities=23%  Similarity=0.339  Sum_probs=186.5

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcc-hHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK-NVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      +++||+++||||++|||++++++|+++|++|++++|+.+ .++...+++...+.++..+.+|++++++++++++++.+.+
T Consensus         5 ~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   84 (254)
T PRK06114          5 DLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAEL   84 (254)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            578999999999999999999999999999999999865 4566667776666678889999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCC--CchhhHh
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSS--MAMYGVT  163 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~--~~~Y~~s  163 (226)
                      +++|+||||||... ..++.+.+.++|++++++|+.+++.++++++|.|++  .++||++||..+..+.++  .+.|++|
T Consensus        85 g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~s  163 (254)
T PRK06114         85 GALTLAVNAAGIAN-ANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAHYNAS  163 (254)
T ss_pred             CCCCEEEECCCCCC-CCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCCcchHHHH
Confidence            99999999999875 467788899999999999999999999999999854  479999999988766554  6889999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC---chhhhhhccCCCCCchhhhccc
Q 027248          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN---DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       164 Kaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~---~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      |+|+++++++++.|+.+ ||+||+|+||+++|++.......   ..+....+..++.+|+|+|.++
T Consensus       164 Kaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~  229 (254)
T PRK06114        164 KAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRPEMVHQTKLFEEQTPMQRMAKVDEMVGPA  229 (254)
T ss_pred             HHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccccchHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            99999999999999988 99999999999999986531111   1233455667889999999764

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-39  Score=264.27  Aligned_cols=216  Identities=24%  Similarity=0.388  Sum_probs=191.1

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      ++.+|+++||||++|||++++++|+++|++|++++|++++++...+++...+.++..+.+|++++++++++++.+.+.++
T Consensus         6 ~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   85 (254)
T PRK08085          6 SLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIG   85 (254)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcC
Confidence            57899999999999999999999999999999999999888888888877666788899999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa  166 (226)
                      ++|++|||+|... ..++.+.+.++|++++++|+.+++.+++++.+.+.+  .++||++||..+..+.++.+.|+++|++
T Consensus        86 ~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  164 (254)
T PRK08085         86 PIDVLINNAGIQR-RHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDTITPYAASKGA  164 (254)
T ss_pred             CCCEEEECCCcCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCCCCcchHHHHHH
Confidence            9999999999864 467788899999999999999999999999999853  4799999999988888899999999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch----hhhhhccCCCCCchhhhccc
Q 027248          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG----VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       167 ~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~----~~~~~~~~~~~~p~~~a~av  225 (226)
                      +++++++++.|+.+ ||++|+|+||+++|++.........    .....+..++.+|+|+|.++
T Consensus       165 ~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~  228 (254)
T PRK08085        165 VKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQELIGAA  228 (254)
T ss_pred             HHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            99999999999988 9999999999999998765433222    22334556788999998764

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-39  Score=264.43  Aligned_cols=222  Identities=29%  Similarity=0.461  Sum_probs=191.5

Q ss_pred             cccccc-cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHH
Q 027248            2 EKMKMA-KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLI   80 (226)
Q Consensus         2 ~~~~~~-~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   80 (226)
                      .++.|+ .+++||+++||||++|||++++++|+++|++|++++|+ ++.+...+.+.+.+.++.++.+|+++.++++.++
T Consensus         4 ~~~~~~~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~   82 (258)
T PRK06935          4 DKFSMDFFSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVV   82 (258)
T ss_pred             hhhccccccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence            344443 45789999999999999999999999999999999998 5666666666665667889999999999999999


Q ss_pred             HHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCc
Q 027248           81 NQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMA  158 (226)
Q Consensus        81 ~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~  158 (226)
                      +++.+.++.+|++|||||... ..++.+.+.++|++.+++|+.+++.++++++|.|++  .++||++||..+..+.++.+
T Consensus        83 ~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  161 (258)
T PRK06935         83 KEALEEFGKIDILVNNAGTIR-RAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVP  161 (258)
T ss_pred             HHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCCch
Confidence            999999999999999999865 467778889999999999999999999999999854  47999999999988888899


Q ss_pred             hhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCc----hhhhhhccCCCCCchhhhccc
Q 027248          159 MYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND----GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       159 ~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~----~~~~~~~~~~~~~p~~~a~av  225 (226)
                      .|++||+++++|+++++.|+.+ ||+||+|+||+++|++.+......    .....++..+...|+|+|.++
T Consensus       162 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  233 (258)
T PRK06935        162 AYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKRIPAGRWGEPDDLMGAA  233 (258)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence            9999999999999999999988 999999999999999865443221    223345667899999998764

>PRK05876 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-39  Score=267.52  Aligned_cols=216  Identities=26%  Similarity=0.413  Sum_probs=187.3

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      .++||+++||||++|||++++++|+++|++|++++|+++++++..+++...+.++.++.+|++++++++++++++.+.++
T Consensus         3 ~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   82 (275)
T PRK05876          3 GFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLG   82 (275)
T ss_pred             CcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            36799999999999999999999999999999999999888888888876677788899999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc---CCEEEEEeccCCcCCCCCCchhhHhHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKT  165 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~---~~~iv~~sS~~~~~~~~~~~~Y~~sKa  165 (226)
                      ++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|.+   +++||++||..+..+.++.+.|++||+
T Consensus        83 ~id~li~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  161 (275)
T PRK05876         83 HVDVVFSNAGIVV-GGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKY  161 (275)
T ss_pred             CCCEEEECCCcCC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCCCchHHHHHH
Confidence            9999999999865 567888999999999999999999999999999853   478999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch----------hhhh-hccCCCCCchhhhccc
Q 027248          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG----------VVSS-VSSLKLSPPSSLTLAV  225 (226)
Q Consensus       166 a~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~----------~~~~-~~~~~~~~p~~~a~av  225 (226)
                      ++.+|+++|+.|+.+ ||+|++|+||+++|++.........          .... -......+|+++|+++
T Consensus       162 a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  233 (275)
T PRK05876        162 GVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLT  233 (275)
T ss_pred             HHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCccccccccccccccccccccCCCHHHHHHHH
Confidence            999999999999987 9999999999999998654211100          0000 1123467899998754

>PRK08265 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-39  Score=264.57  Aligned_cols=212  Identities=26%  Similarity=0.397  Sum_probs=182.8

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++   +.++.++.+|++++++++++++++.+.++
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   79 (261)
T PRK08265          3 GLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL---GERARFIATDITDDAAIERAVATVVARFG   79 (261)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCeeEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            467899999999999999999999999999999999987777666554   45688899999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhh-hcCCEEEEEeccCCcCCCCCCchhhHhHHHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHL-QKGSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l-~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~  167 (226)
                      ++|+||||||.... .. .+.+.++|++++++|+.+++.++++++|+| ++.++||++||..+..+.++...|+++|+++
T Consensus        80 ~id~lv~~ag~~~~-~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asKaa~  157 (261)
T PRK08265         80 RVDILVNLACTYLD-DG-LASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQTGRWLYPASKAAI  157 (261)
T ss_pred             CCCEEEECCCCCCC-Cc-CcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCchhHHHHHHH
Confidence            99999999997642 22 356889999999999999999999999998 4568999999999998989999999999999


Q ss_pred             HHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch-----h-hhhhccCCCCCchhhhccc
Q 027248          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG-----V-VSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       168 ~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~-----~-~~~~~~~~~~~p~~~a~av  225 (226)
                      +++++.++.|+.+ ||+||+|+||+++|++.+.......     . ....+..++.+|+|+|.++
T Consensus       158 ~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~  222 (261)
T PRK08265        158 RQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAPFHLLGRVGDPEEVAQVV  222 (261)
T ss_pred             HHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhhcccCCCCCccCHHHHHHHH
Confidence            9999999999998 9999999999999998765432211     1 1123456788999999865

>PRK06172 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-39  Score=262.08  Aligned_cols=218  Identities=30%  Similarity=0.445  Sum_probs=191.8

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      ++++||+++||||++|||.+++++|+++|++|++++|+.++++...+++.+.+.++..+.+|++++++++.+++++.+.+
T Consensus         3 ~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   82 (253)
T PRK06172          3 MTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAY   82 (253)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            45789999999999999999999999999999999999988888888887777788999999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHH
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKT  165 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKa  165 (226)
                      +++|++|||+|......++.+.+.++|++++++|+.+++.++++++|.|.+  .++||++||..+..+.++...|++||+
T Consensus        83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sKa  162 (253)
T PRK06172         83 GRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAASKH  162 (253)
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCchhHHHHH
Confidence            999999999998653455778899999999999999999999999998843  479999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCceeCCccccccc-Cch----hhhhhccCCCCCchhhhccc
Q 027248          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS-NDG----VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       166 a~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~-~~~----~~~~~~~~~~~~p~~~a~av  225 (226)
                      ++++|+++++.|+.+ ||+|++|+||+++|++.+.... ...    +....+..++.+|+++|+.+
T Consensus       163 a~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ia~~~  228 (253)
T PRK06172        163 AVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPVGRIGKVEEVASAV  228 (253)
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccCCCCCccCHHHHHHHH
Confidence            999999999999988 9999999999999999776533 121    22233456788999998764

>PRK07035 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-39  Score=261.55  Aligned_cols=218  Identities=33%  Similarity=0.544  Sum_probs=192.2

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      +++++|+++||||++|||++++++|+++|++|++++|+.++++...+++.+.+.++.++.+|+++.++++.+++++.+.+
T Consensus         4 ~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (252)
T PRK07035          4 FDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERH   83 (252)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            35789999999999999999999999999999999999988888888887767778889999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHH
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKT  165 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKa  165 (226)
                      +++|+||||||......++.+.+.++|++.+++|+.+++.++++++|++++  .++|+++||..+..+.++.+.|++||+
T Consensus        84 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  163 (252)
T PRK07035         84 GRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSITKA  163 (252)
T ss_pred             CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCCCCcchHHHHH
Confidence            999999999997543456778889999999999999999999999999854  479999999999888899999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchh----hhhhccCCCCCchhhhccc
Q 027248          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGV----VSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       166 a~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~----~~~~~~~~~~~p~~~a~av  225 (226)
                      ++++|+++++.|+.+ ||+|++|+||+++|++.+........    ....+..++.+|+|+|+++
T Consensus       164 al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~  228 (252)
T PRK07035        164 AVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDAILKQALAHIPLRRHAEPSEMAGAV  228 (252)
T ss_pred             HHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHHHHHHHHccCCCCCcCCHHHHHHHH
Confidence            999999999999988 99999999999999987665433222    2233556788999999865

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.7e-40  Score=272.86  Aligned_cols=220  Identities=21%  Similarity=0.237  Sum_probs=171.1

Q ss_pred             ccccccCCCEEEEEcCC--CchhHHHHHHHHhCCCeEEEEecCcchHHHHHHH-------------------------HH
Q 027248            5 KMAKRFQGKVAIVTAST--QGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK-------------------------LK   57 (226)
Q Consensus         5 ~~~~~~~gk~vlItGa~--~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~-------------------------~~   57 (226)
                      +|+.+++||+++|||++  +|||++++++|+++|++|++.++.+ .++.....                         +.
T Consensus         1 ~~~~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~   79 (299)
T PRK06300          1 MLKIDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMD   79 (299)
T ss_pred             CCCcCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhh
Confidence            46778899999999996  9999999999999999999977541 11111000                         00


Q ss_pred             hcCCcEEEEEeeCCC--------HHHHHHHHHHHHHHhCCCCEEEEcCCCCC-CCCccccccHHHHHHHHHHHHHHHHHH
Q 027248           58 ARGIEVIGVVCHVSN--------GQQRKNLINQTIEKFGKIDVVVSNAAANP-SVDSILQTKESVLDKLWDINVKSSILL  128 (226)
Q Consensus        58 ~~~~~~~~~~~Dv~~--------~~~v~~~~~~~~~~~~~id~li~nag~~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~  128 (226)
                      ..-.+...+.+|+++        +++++.+++++.+++|++|+||||||... ...++.+.+.++|++++++|+.|++++
T Consensus        80 ~d~~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l  159 (299)
T PRK06300         80 ASFDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSL  159 (299)
T ss_pred             hhcCCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHH
Confidence            000011122222222        34689999999999999999999999753 246788999999999999999999999


Q ss_pred             HHHHhhhhhcCCEEEEEeccCCcCCCCCCc-hhhHhHHHHHHHHHHHHHHhCC--CeEEEEEecCceeCCcccccccCch
Q 027248          129 LQDAAPHLQKGSSVVLISSIAGYQPQSSMA-MYGVTKTALLGLTKALAAEMAP--DTRVNCVAPGFVPTHFAEYITSNDG  205 (226)
Q Consensus       129 ~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~-~Y~~sKaa~~~~~~~la~e~~~--~i~v~~v~Pg~v~t~~~~~~~~~~~  205 (226)
                      +++++|+|+++|+||++||..+..+.|++. .|++||+|+++|+++|+.|+++  ||+||+|+||+++|++.......+.
T Consensus       160 ~~a~~p~m~~~G~ii~iss~~~~~~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~~~~~~  239 (299)
T PRK06300        160 LSHFGPIMNPGGSTISLTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIGFIER  239 (299)
T ss_pred             HHHHHHHhhcCCeEEEEeehhhcCcCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhcccccHH
Confidence            999999998889999999999988888875 8999999999999999999964  9999999999999998754321111


Q ss_pred             ----hhhhhccCCCCCchhhhccc
Q 027248          206 ----VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       206 ----~~~~~~~~~~~~p~~~a~av  225 (226)
                          .....+..++.+|+|+|.++
T Consensus       240 ~~~~~~~~~p~~r~~~peevA~~v  263 (299)
T PRK06300        240 MVDYYQDWAPLPEPMEAEQVGAAA  263 (299)
T ss_pred             HHHHHHhcCCCCCCcCHHHHHHHH
Confidence                22334556788999998764

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=100.00  E-value=2.1e-39  Score=263.83  Aligned_cols=214  Identities=30%  Similarity=0.461  Sum_probs=178.7

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+.   .+.++..+.+|+++.++++++++++.+.++
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (262)
T TIGR03325         2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAA---HGDAVVGVEGDVRSLDDHKEAVARCVAAFG   78 (262)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhh---cCCceEEEEeccCCHHHHHHHHHHHHHHhC
Confidence            35789999999999999999999999999999999988766655432   244678899999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCccccccH----HHHHHHHHHHHHHHHHHHHHHhhhhhc-CCEEEEEeccCCcCCCCCCchhhHh
Q 027248           89 KIDVVVSNAAANPSVDSILQTKE----SVLDKLWDINVKSSILLLQDAAPHLQK-GSSVVLISSIAGYQPQSSMAMYGVT  163 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~----~~~~~~~~~N~~~~~~~~~~~~~~l~~-~~~iv~~sS~~~~~~~~~~~~Y~~s  163 (226)
                      ++|+||||||+.....++.+.+.    ++|++++++|+.++++++++++|.|++ +++||++||..+..+.++...|++|
T Consensus        79 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~s  158 (262)
T TIGR03325        79 KIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYPNGGGPLYTAA  158 (262)
T ss_pred             CCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecCCCCCchhHHH
Confidence            99999999997532233434433    579999999999999999999999853 5789999999998888888999999


Q ss_pred             HHHHHHHHHHHHHHhCCCeEEEEEecCceeCCcccccc---cC---------chhhhhhccCCCCCchhhhccc
Q 027248          164 KTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYIT---SN---------DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       164 Kaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~~~~~---~~---------~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      |+|+++|+++|+.|+++.|+||+|+||+++|+|.....   ..         .......+..++.+|+|+|.++
T Consensus       159 Kaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~  232 (262)
T TIGR03325       159 KHAVVGLVKELAFELAPYVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIGRMPDAEEYTGAY  232 (262)
T ss_pred             HHHHHHHHHHHHHhhccCeEEEEEecCCCcCCCccccccccccccccccchhhhhhhcCCCCCCCChHHhhhhe
Confidence            99999999999999987899999999999999864311   00         1122335667889999999875

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-39  Score=263.81  Aligned_cols=213  Identities=29%  Similarity=0.430  Sum_probs=181.7

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      ++||+++||||++|||++++++|+++|++|++++|++++++...+++   +.++.++++|++++++++.+++++.+.+++
T Consensus         4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   80 (263)
T PRK06200          4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF---GDHVLVVEGDVTSYADNQRAVDQTVDAFGK   80 (263)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            57899999999999999999999999999999999988776665554   345778899999999999999999999999


Q ss_pred             CCEEEEcCCCCCCCCccccccHHH----HHHHHHHHHHHHHHHHHHHhhhhhc-CCEEEEEeccCCcCCCCCCchhhHhH
Q 027248           90 IDVVVSNAAANPSVDSILQTKESV----LDKLWDINVKSSILLLQDAAPHLQK-GSSVVLISSIAGYQPQSSMAMYGVTK  164 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~----~~~~~~~N~~~~~~~~~~~~~~l~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK  164 (226)
                      +|+||||||+.....++.+.+.++    |++++++|+.+++.++++++|.|++ +++||++||..+..+.++...|++||
T Consensus        81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK  160 (263)
T PRK06200         81 LDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPGGGGPLYTASK  160 (263)
T ss_pred             CCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCCCchhHHHH
Confidence            999999999864334555666655    8999999999999999999999854 58999999999988888899999999


Q ss_pred             HHHHHHHHHHHHHhCCCeEEEEEecCceeCCcccccc-----------c--CchhhhhhccCCCCCchhhhccc
Q 027248          165 TALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYIT-----------S--NDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       165 aa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~~~~~-----------~--~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +|+++|+++|+.|++++|+||+|+||+++|++.....           +  ...+....+..++.+|+|+|+++
T Consensus       161 ~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~eva~~~  234 (263)
T PRK06200        161 HAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPLQFAPQPEDHTGPY  234 (263)
T ss_pred             HHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcCCCCCCCCCHHHHhhhh
Confidence            9999999999999988999999999999999864211           0  11123344567889999999875

>PRK08862 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.6e-39  Score=255.77  Aligned_cols=184  Identities=16%  Similarity=0.212  Sum_probs=168.8

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      +++||+++||||++|||++++++|+++|++|++++|+++++++..+++.+.+.++..+.+|++++++++++++++.++++
T Consensus         2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (227)
T PRK08862          2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFN   81 (227)
T ss_pred             CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            46899999999999999999999999999999999999999888888877777788899999999999999999999998


Q ss_pred             -CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc---CCEEEEEeccCCcCCCCCCchhhHhH
Q 027248           89 -KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTK  164 (226)
Q Consensus        89 -~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~---~~~iv~~sS~~~~~~~~~~~~Y~~sK  164 (226)
                       ++|++|||||......++.+.+.++|.+.+++|+.+++.+++.++|+|++   +|+||++||..+.   ++...|++||
T Consensus        82 ~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~---~~~~~Y~asK  158 (227)
T PRK08862         82 RAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH---QDLTGVESSN  158 (227)
T ss_pred             CCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC---CCcchhHHHH
Confidence             99999999986554567888999999999999999999999999999953   4799999997643   5678899999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCceeCC
Q 027248          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTH  195 (226)
Q Consensus       165 aa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~  195 (226)
                      +|+++|+++|+.|+.+ ||+||+|+||+++|+
T Consensus       159 aal~~~~~~la~el~~~~Irvn~v~PG~i~t~  190 (227)
T PRK08862        159 ALVSGFTHSWAKELTPFNIRVGGVVPSIFSAN  190 (227)
T ss_pred             HHHHHHHHHHHHHHhhcCcEEEEEecCcCcCC
Confidence            9999999999999988 999999999999998

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=6.6e-39  Score=259.73  Aligned_cols=216  Identities=25%  Similarity=0.381  Sum_probs=192.1

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      +++||+++||||+++||++++++|+++|++|++++|++++.+...+++...+.++..+.+|++++++++.+++++.+.++
T Consensus         7 ~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   86 (255)
T PRK07523          7 DLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIG   86 (255)
T ss_pred             CCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            57899999999999999999999999999999999999888887777776667788999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa  166 (226)
                      ++|+||||||... ..++.+.+.++|++++++|+.+++++++++.+.|++  .++||++||..+..+.++.+.|+++|++
T Consensus        87 ~~d~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~sK~a  165 (255)
T PRK07523         87 PIDILVNNAGMQF-RTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARPGIAPYTATKGA  165 (255)
T ss_pred             CCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCCCCccHHHHHHH
Confidence            9999999999875 567888899999999999999999999999999854  4799999999988888999999999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch----hhhhhccCCCCCchhhhccc
Q 027248          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG----VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       167 ~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~----~~~~~~~~~~~~p~~~a~av  225 (226)
                      ++.+++.++.|+++ ||+|++++||+++|++.+.......    +....+..++..|+|+|.++
T Consensus       166 ~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  229 (255)
T PRK07523        166 VGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTPAGRWGKVEELVGAC  229 (255)
T ss_pred             HHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            99999999999988 9999999999999998765443322    22344556788999999764

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=2.7e-39  Score=286.68  Aligned_cols=214  Identities=24%  Similarity=0.404  Sum_probs=188.8

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      .+.||+++||||++|||++++++|+++|++|++++|++++++...+++   +.++..+.+|++++++++.+++++.+++|
T Consensus       266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  342 (520)
T PRK06484        266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL---GDEHLSVQADITDEAAVESAFAQIQARWG  342 (520)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceeEEEccCCCHHHHHHHHHHHHHHcC
Confidence            357899999999999999999999999999999999988777766554   44677889999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHhHHHHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALL  168 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~  168 (226)
                      ++|+||||||+.....++.+.+.++|++++++|+.++++++++++|+|++.++||++||.++..+.++.+.|++||++++
T Consensus       343 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaal~  422 (520)
T PRK06484        343 RLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLALPPRNAYCASKAAVT  422 (520)
T ss_pred             CCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCCCCCchhHHHHHHHH
Confidence            99999999998643467788899999999999999999999999999977789999999999999999999999999999


Q ss_pred             HHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC-----chhhhhhccCCCCCchhhhccc
Q 027248          169 GLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN-----DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       169 ~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~-----~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +|+++|+.|+.+ ||+||+|+||+++|++.+.....     ..+.+..+..++.+|+|+|+++
T Consensus       423 ~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~  485 (520)
T PRK06484        423 MLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPLGRLGDPEEVAEAI  485 (520)
T ss_pred             HHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            999999999988 99999999999999987654322     1233445566788999999864

>PRK06398 aldose dehydrogenase; Validated

Probab=100.00  E-value=3.5e-39  Score=262.08  Aligned_cols=205  Identities=29%  Similarity=0.425  Sum_probs=178.6

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      +++||+++||||++|||++++++|+++|++|++++|+++..           .++.++.+|++++++++++++++.+.++
T Consensus         3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~-----------~~~~~~~~D~~~~~~i~~~~~~~~~~~~   71 (258)
T PRK06398          3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY-----------NDVDYFKVDVSNKEQVIKGIDYVISKYG   71 (258)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc-----------CceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            46799999999999999999999999999999999987542           1477899999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa  166 (226)
                      ++|+||||||+.. ..++.+.+.++|++++++|+.|++.++++++|+|++  .++||++||..+..+.++...|++||+|
T Consensus        72 ~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa  150 (258)
T PRK06398         72 RIDILVNNAGIES-YGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKHA  150 (258)
T ss_pred             CCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCCCchhhhhHHH
Confidence            9999999999865 577888999999999999999999999999999954  5799999999999888999999999999


Q ss_pred             HHHHHHHHHHHhCCCeEEEEEecCceeCCccccccc------Cch-------hhhhhccCCCCCchhhhccc
Q 027248          167 LLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITS------NDG-------VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       167 ~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~~~~~~------~~~-------~~~~~~~~~~~~p~~~a~av  225 (226)
                      +++++++++.|+.++|+||+|+||+++|++......      ...       +....+..++..|+|+|+++
T Consensus       151 l~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~~  222 (258)
T PRK06398        151 VLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVGKPEEVAYVV  222 (258)
T ss_pred             HHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhcCCcCCCcCHHHHHHHH
Confidence            999999999999878999999999999998754321      111       11223456788999999865

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=4.8e-39  Score=261.28  Aligned_cols=211  Identities=26%  Similarity=0.272  Sum_probs=182.8

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCEE
Q 027248           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVV   93 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~l   93 (226)
                      +++||||++|||++++++|+++|++|++++|+++++++..+++.+.+ ++.++.+|++++++++++++++.+.++++|+|
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l   80 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYG-EVYAVKADLSDKDDLKNLVKEAWELLGGIDAL   80 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC-CceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            59999999999999999999999999999999988888888776543 67889999999999999999999999999999


Q ss_pred             EEcCCCCC-CCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhh---cCCEEEEEeccCCcCCCCCCchhhHhHHHHHH
Q 027248           94 VSNAAANP-SVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ---KGSSVVLISSIAGYQPQSSMAMYGVTKTALLG  169 (226)
Q Consensus        94 i~nag~~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~---~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~  169 (226)
                      |||||... ...++.+.+.++|.+.+++|+.+++.+++.++|.|.   +.++||++||..+..+.++...|++||+|+++
T Consensus        81 i~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sKaa~~~  160 (259)
T PRK08340         81 VWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPPLVLADVTRAGLVQ  160 (259)
T ss_pred             EECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCCchHHHHHHHHHHH
Confidence            99999753 134577888999999999999999999999999874   25799999999998888999999999999999


Q ss_pred             HHHHHHHHhCC-CeEEEEEecCceeCCccccccc----------C----chhhhhhccCCCCCchhhhccc
Q 027248          170 LTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS----------N----DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       170 ~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~----------~----~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      |+++|+.|+.+ ||+||+|+||+++|++.+....          +    ..+....+..++..|+|+|+++
T Consensus       161 ~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~  231 (259)
T PRK08340        161 LAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTPLKRTGRWEELGSLI  231 (259)
T ss_pred             HHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCCccCCCCHHHHHHHH
Confidence            99999999998 9999999999999998753211          0    1122344567789999999875

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=100.00  E-value=1.2e-38  Score=257.06  Aligned_cols=214  Identities=29%  Similarity=0.475  Sum_probs=184.8

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      +++||+++||||++|||++++++|+++|++|++++|++  .+...+.+.+.+.++.++.+|++++++++.+++++.+.++
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (248)
T TIGR01832         2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSE--PSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFG   79 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCch--HHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            47899999999999999999999999999999999975  2344555555566788999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc---CCEEEEEeccCCcCCCCCCchhhHhHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKT  165 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~---~~~iv~~sS~~~~~~~~~~~~Y~~sKa  165 (226)
                      ++|++|||||... ..++.+.+.++|++++++|+.+++.++++++|.|.+   .++||++||..+..+.++...|++||+
T Consensus        80 ~~d~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKa  158 (248)
T TIGR01832        80 HIDILVNNAGIIR-RADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASKH  158 (248)
T ss_pred             CCCEEEECCCCCC-CCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCCchhHHHHH
Confidence            9999999999875 456678889999999999999999999999999854   469999999998888888899999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCc----hhhhhhccCCCCCchhhhccc
Q 027248          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND----GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       166 a~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~----~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ++++++++++.|+.+ ||+||+|+||+++|++.+......    .+....+..++.+|+|+|+++
T Consensus       159 a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  223 (248)
T TIGR01832       159 GVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAILERIPAGRWGTPDDIGGPA  223 (248)
T ss_pred             HHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            999999999999988 999999999999999876543221    223445667899999999864

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-38  Score=258.21  Aligned_cols=219  Identities=25%  Similarity=0.367  Sum_probs=188.4

Q ss_pred             cccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCc-chHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHH
Q 027248            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ-KNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTI   84 (226)
Q Consensus         6 ~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (226)
                      |..++++|+++||||++|||++++++|+++|++|++++|+. +..+...+++...+.++.++.+|+++.++++++++++.
T Consensus         1 ~~~~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~   80 (261)
T PRK08936          1 MYSDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAV   80 (261)
T ss_pred             CccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHH
Confidence            34568899999999999999999999999999999988854 45556666676666778899999999999999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc---CCEEEEEeccCCcCCCCCCchhh
Q 027248           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYG  161 (226)
Q Consensus        85 ~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~---~~~iv~~sS~~~~~~~~~~~~Y~  161 (226)
                      +.++++|++|||||... ..++.+.+.++|++++++|+.+++.+++.+++.|.+   .++||++||..+..+.++...|+
T Consensus        81 ~~~g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~  159 (261)
T PRK08936         81 KEFGTLDVMINNAGIEN-AVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYA  159 (261)
T ss_pred             HHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCCCCcccH
Confidence            99999999999999875 466778899999999999999999999999999854   47999999999888889999999


Q ss_pred             HhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch----hhhhhccCCCCCchhhhccc
Q 027248          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG----VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       162 ~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~----~~~~~~~~~~~~p~~~a~av  225 (226)
                      ++|+|++++++.++.|+.+ ||+|++|+||+++|++.+.......    .....+..++..|+|+|+++
T Consensus       160 ~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~  228 (261)
T PRK08936        160 ASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPKQRADVESMIPMGYIGKPEEIAAVA  228 (261)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            9999999999999999988 9999999999999998654322222    22334556788999998764

>PRK05599 hypothetical protein; Provisional

Probab=100.00  E-value=8.6e-39  Score=258.08  Aligned_cols=202  Identities=23%  Similarity=0.294  Sum_probs=176.6

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCC-cEEEEEeeCCCHHHHHHHHHHHHHHhCCCC
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI-EVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id   91 (226)
                      ++++||||++|||++++++|+ +|++|++++|+++++++..+++.+.+. .+.++.+|++|+++++++++++.+.+|++|
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   79 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS   79 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence            479999999999999999999 599999999999999988888876654 477899999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc---CCEEEEEeccCCcCCCCCCchhhHhHHHHH
Q 027248           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALL  168 (226)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~---~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~  168 (226)
                      ++|||||... ..+..+.+.+++.+++++|+.+++++++.++|.|.+   +++||++||..+..+.++...|++||+|++
T Consensus        80 ~lv~nag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~  158 (246)
T PRK05599         80 LAVVAFGILG-DQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRANYVYGSTKAGLD  158 (246)
T ss_pred             EEEEecCcCC-CchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcCCcchhhHHHHHH
Confidence            9999999865 344556777888999999999999999999999853   489999999999988899999999999999


Q ss_pred             HHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          169 GLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       169 ~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +|+++|+.|+.+ ||+||+++||+++|++.......         ....+|+++|+++
T Consensus       159 ~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~~~~---------~~~~~pe~~a~~~  207 (246)
T PRK05599        159 AFCQGLADSLHGSHVRLIIARPGFVIGSMTTGMKPA---------PMSVYPRDVAAAV  207 (246)
T ss_pred             HHHHHHHHHhcCCCceEEEecCCcccchhhcCCCCC---------CCCCCHHHHHHHH
Confidence            999999999988 99999999999999986543211         1235889988764

>PRK07109 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.2e-39  Score=268.53  Aligned_cols=216  Identities=20%  Similarity=0.305  Sum_probs=189.9

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      ..+++|+++||||++|||++++++|+++|++|++++|++++++...+++.+.+.++..+.+|++|+++++++++++.+++
T Consensus         4 ~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~   83 (334)
T PRK07109          4 KPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEEL   83 (334)
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHC
Confidence            35678999999999999999999999999999999999999888888888778889999999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHH
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKT  165 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKa  165 (226)
                      +++|++|||||... ..++.+.+.++|++++++|+.|++++++.++|+|++  .++||++||..+..+.+..+.|++||+
T Consensus        84 g~iD~lInnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asK~  162 (334)
T PRK07109         84 GPIDTWVNNAMVTV-FGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPLQSAYCAAKH  162 (334)
T ss_pred             CCCCEEEECCCcCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCCcchHHHHHHH
Confidence            99999999999865 567888999999999999999999999999999965  489999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC---CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          166 ALLGLTKALAAEMAP---DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       166 a~~~~~~~la~e~~~---~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ++++|+++++.|+..   +|+++.|+||+++||+......... ....+..++.+|+++|+++
T Consensus       163 a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~~~~~-~~~~~~~~~~~pe~vA~~i  224 (334)
T PRK07109        163 AIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWARSRLP-VEPQPVPPIYQPEVVADAI  224 (334)
T ss_pred             HHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhhhhcc-ccccCCCCCCCHHHHHHHH
Confidence            999999999999863   7999999999999997654211110 1122345678999999875

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-38  Score=259.56  Aligned_cols=217  Identities=24%  Similarity=0.422  Sum_probs=190.3

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      +++++|+++||||++|||++++++|+++|++|++++|+++++++..+++...+.++.++.+|++++++++++++++.+.+
T Consensus         6 ~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   85 (265)
T PRK07097          6 FSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEV   85 (265)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            35678999999999999999999999999999999999988888888887767788999999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHH
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKT  165 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKa  165 (226)
                      +++|+||||||+.. ..++.+.+.++|++++++|+.+++.+.+.++|+|++  .++||++||..+..+.++...|+++|+
T Consensus        86 ~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKa  164 (265)
T PRK07097         86 GVIDILVNNAGIIK-RIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKG  164 (265)
T ss_pred             CCCCEEEECCCCCC-CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCCCCccHHHHHH
Confidence            99999999999876 467788999999999999999999999999999954  479999999998888889999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCceeCCccccccc------Cchh----hhhhccCCCCCchhhhccc
Q 027248          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS------NDGV----VSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       166 a~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~------~~~~----~~~~~~~~~~~p~~~a~av  225 (226)
                      ++++++++|+.|+.+ ||+|++|+||+++|++......      ...+    ....+..++.+|+|+|.++
T Consensus       165 al~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  235 (265)
T PRK07097        165 GLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPAARWGDPEDLAGPA  235 (265)
T ss_pred             HHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCCccCCcCHHHHHHHH
Confidence            999999999999988 9999999999999998755432      1111    1233445688899998654

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.1e-38  Score=258.61  Aligned_cols=213  Identities=31%  Similarity=0.423  Sum_probs=177.7

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      .+.++||+++||||++|||++++++|+++|++|++++++.+..   .+++...  .+.++.+|++++++++++++++.+.
T Consensus         2 ~~~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~---~~~l~~~--~~~~~~~Dl~~~~~~~~~~~~~~~~   76 (255)
T PRK06463          2 SMRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENE---AKELREK--GVFTIKCDVGNRDQVKKSKEVVEKE   76 (255)
T ss_pred             CCCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHH---HHHHHhC--CCeEEEecCCCHHHHHHHHHHHHHH
Confidence            3456899999999999999999999999999999887765432   2233322  3678899999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcC-CCCCCchhhHh
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQ-PQSSMAMYGVT  163 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~-~~~~~~~Y~~s  163 (226)
                      ++++|+||||||+.. ..++.+.+.++|++++++|+.+++++++.++|.|++  .++||++||..+.. +.++.+.|++|
T Consensus        77 ~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~as  155 (255)
T PRK06463         77 FGRVDVLVNNAGIMY-LMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAEGTTFYAIT  155 (255)
T ss_pred             cCCCCEEEECCCcCC-CCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCCCCccHhHHH
Confidence            999999999999865 467778899999999999999999999999999863  57999999998764 45678889999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCc-------hhhhhhccCCCCCchhhhccc
Q 027248          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND-------GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       164 Kaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~-------~~~~~~~~~~~~~p~~~a~av  225 (226)
                      |+|+++|+++++.|+.+ ||+||+++||+++|++........       .+....+..++.+|+|+|+++
T Consensus       156 Kaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~  225 (255)
T PRK06463        156 KAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVLKTTGKPEDIANIV  225 (255)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCCcCCCcCHHHHHHHH
Confidence            99999999999999988 999999999999999875432221       122334556788999999764

>PRK08643 acetoin reductase; Validated

Probab=100.00  E-value=1.3e-38  Score=258.08  Aligned_cols=213  Identities=33%  Similarity=0.469  Sum_probs=188.1

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id   91 (226)
                      ||+++||||++|||++++++|+++|++|++++|+.+..+....++.+.+.++.++.+|++++++++++++++.++++++|
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   81 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN   81 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            68999999999999999999999999999999999888888888877667788899999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc---CCEEEEEeccCCcCCCCCCchhhHhHHHHH
Q 027248           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALL  168 (226)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~---~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~  168 (226)
                      +||||||+.. ..++.+.+.++|++++++|+.+++.+++.+++.|++   +++||++||..+..+.++...|++||++++
T Consensus        82 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  160 (256)
T PRK08643         82 VVVNNAGVAP-TTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAVR  160 (256)
T ss_pred             EEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCCCchhHHHHHHHH
Confidence            9999999865 567788889999999999999999999999998854   369999999999888899999999999999


Q ss_pred             HHHHHHHHHhCC-CeEEEEEecCceeCCccccccc--------C-----chhhhhhccCCCCCchhhhccc
Q 027248          169 GLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS--------N-----DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       169 ~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~--------~-----~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +|++.++.|+.+ ||+|++|+||+++|++......        .     ..+...++..++.+|+|+|.++
T Consensus       161 ~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~  231 (256)
T PRK08643        161 GLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLGRLSEPEDVANCV  231 (256)
T ss_pred             HHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccCCCCCCcCHHHHHHHH
Confidence            999999999988 9999999999999998754321        1     1122344566788999998865

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.5e-38  Score=258.07  Aligned_cols=215  Identities=25%  Similarity=0.350  Sum_probs=183.5

Q ss_pred             ccCCCEEEEEcCC--CchhHHHHHHHHhCCCeEEEEecCc-----------chHHHHHHHHHhcCCcEEEEEeeCCCHHH
Q 027248            9 RFQGKVAIVTAST--QGIGFGIAERLGLEGASVVVSSRKQ-----------KNVDEAVVKLKARGIEVIGVVCHVSNGQQ   75 (226)
Q Consensus         9 ~~~gk~vlItGa~--~giG~a~~~~l~~~g~~v~~~~r~~-----------~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   75 (226)
                      .++||+++||||+  +|||++++++|+++|++|++++|+.           +......+++.+.+.++.++.+|+++.++
T Consensus         3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~   82 (256)
T PRK12859          3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDA   82 (256)
T ss_pred             CcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence            5789999999999  5999999999999999999886431           22334455566667788899999999999


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCC
Q 027248           76 RKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQP  153 (226)
Q Consensus        76 v~~~~~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~  153 (226)
                      ++++++++.+.++++|++|||||... ..++.+.+.++|++++++|+.+++.+.++++|.|++  .++||++||..+..+
T Consensus        83 i~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~  161 (256)
T PRK12859         83 PKELLNKVTEQLGYPHILVNNAAYST-NNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQGP  161 (256)
T ss_pred             HHHHHHHHHHHcCCCcEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCCC
Confidence            99999999999999999999999865 467889999999999999999999999999999964  579999999999988


Q ss_pred             CCCCchhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          154 QSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       154 ~~~~~~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      .++...|++||+++++|+++++.|+.+ ||+||+|+||+++|++..... ...+....+..++.+|+|+|+++
T Consensus       162 ~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~~~-~~~~~~~~~~~~~~~~~d~a~~~  233 (256)
T PRK12859        162 MVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTEEI-KQGLLPMFPFGRIGEPKDAARLI  233 (256)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCHHH-HHHHHhcCCCCCCcCHHHHHHHH
Confidence            899999999999999999999999988 999999999999999643211 11233444556788999998765

>PRK07677 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-38  Score=255.40  Aligned_cols=213  Identities=24%  Similarity=0.365  Sum_probs=184.0

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id   91 (226)
                      ||+++||||++|||+++++.|+++|++|++++|+.++++...+++.+.+.++.++.+|++++++++++++++.+.++++|
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID   80 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence            68999999999999999999999999999999998888887777766666788999999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc---CCEEEEEeccCCcCCCCCCchhhHhHHHHH
Q 027248           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALL  168 (226)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~---~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~  168 (226)
                      +||||+|... ..++.+.+.++|++++++|+.++++++++++|.|.+   .++||++||..+..+.++...|++||+|++
T Consensus        81 ~lI~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sKaa~~  159 (252)
T PRK07677         81 ALINNAAGNF-ICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVL  159 (252)
T ss_pred             EEEECCCCCC-CCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCCCcchHHHHHHHH
Confidence            9999999764 467788999999999999999999999999998743   479999999999888888999999999999


Q ss_pred             HHHHHHHHHhCC--CeEEEEEecCceeCC-cccccccCch----hhhhhccCCCCCchhhhccc
Q 027248          169 GLTKALAAEMAP--DTRVNCVAPGFVPTH-FAEYITSNDG----VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       169 ~~~~~la~e~~~--~i~v~~v~Pg~v~t~-~~~~~~~~~~----~~~~~~~~~~~~p~~~a~av  225 (226)
                      +|+++|+.|+.+  ||++++|+||+++|+ +.......+.    +.+..+..++.+|+|+|+++
T Consensus       160 ~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~  223 (252)
T PRK07677        160 AMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPLGRLGTPEEIAGLA  223 (252)
T ss_pred             HHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhccCCCCCCCCHHHHHHHH
Confidence            999999999963  999999999999954 3333322222    22334556788999999764

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=3.4e-38  Score=256.20  Aligned_cols=217  Identities=28%  Similarity=0.377  Sum_probs=180.9

Q ss_pred             cccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus         6 ~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      |...+++|+++||||++|||++++++|+++|++|++++|++ ..+...+++...+.++.++.+|+++.++++.+++++.+
T Consensus         2 ~~~~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (260)
T PRK12823          2 MNQRFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSE-LVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVE   80 (260)
T ss_pred             cccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCch-HHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHH
Confidence            45567899999999999999999999999999999999985 34556666666667788999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHh
Q 027248           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVT  163 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~s  163 (226)
                      .++++|+||||||......++.+.+.++|++.+++|+.+++++++.++|.|++  .++||++||..+..  ++...|++|
T Consensus        81 ~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--~~~~~Y~~s  158 (260)
T PRK12823         81 AFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRG--INRVPYSAA  158 (260)
T ss_pred             HcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccC--CCCCccHHH
Confidence            99999999999997543567888999999999999999999999999999954  47999999987642  356689999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccc-----cC--c----h----hhhhhccCCCCCchhhhccc
Q 027248          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYIT-----SN--D----G----VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       164 Kaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~-----~~--~----~----~~~~~~~~~~~~p~~~a~av  225 (226)
                      |+|+++|+++|+.|+.+ ||+|++|+||+++||+.....     .+  .    .    .....+..++..|+|+|+++
T Consensus       159 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  236 (260)
T PRK12823        159 KGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMKRYGTIDEQVAAI  236 (260)
T ss_pred             HHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCcccCCCHHHHHHHH
Confidence            99999999999999988 999999999999998632110     00  0    0    11223445678899999875

>PRK06125 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-38  Score=256.87  Aligned_cols=213  Identities=23%  Similarity=0.363  Sum_probs=182.6

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhc-CCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      ++++||+++|||+++|||++++++|+++|++|++++|++++.+...+++... +.++..+.+|++++++++.++++    
T Consensus         3 ~~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~----   78 (259)
T PRK06125          3 LHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAE----   78 (259)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHH----
Confidence            3568999999999999999999999999999999999998888877777654 44678899999999998887753    


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhH
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTK  164 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sK  164 (226)
                      ++++|++|||+|... ..++.+.+.++|++++++|+.++++++++++|.|++  .++||++||..+..+.+++..|+++|
T Consensus        79 ~g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~ask  157 (259)
T PRK06125         79 AGDIDILVNNAGAIP-GGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDADYICGSAGN  157 (259)
T ss_pred             hCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCCCCchHhHHHH
Confidence            589999999999865 567888999999999999999999999999999964  47999999999988888899999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCceeCCccccccc--------Cc----hhhhhhccCCCCCchhhhccc
Q 027248          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS--------ND----GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       165 aa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~--------~~----~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +|+++|+++++.|+.+ ||+||+|+||+++|++......        ..    .+....+..++.+|+|+|+++
T Consensus       158 ~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~  231 (259)
T PRK06125        158 AALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPLGRPATPEEVADLV  231 (259)
T ss_pred             HHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhccCCcCCCcCHHHHHHHH
Confidence            9999999999999988 9999999999999997543321        11    122334556788999999764

>PRK09242 tropinone reductase; Provisional

Probab=100.00  E-value=4.9e-38  Score=254.94  Aligned_cols=217  Identities=29%  Similarity=0.421  Sum_probs=191.1

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      ++++||+++||||++|||++++++|+++|++|++++|+.+.++...+++...  +.++.++.+|++++++++.+++++.+
T Consensus         5 ~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   84 (257)
T PRK09242          5 WRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVED   84 (257)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999998888887777655  55788899999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHh
Q 027248           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVT  163 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~s  163 (226)
                      .++++|+||||||... ..+..+.+.++|++++++|+.+++.++++++|+|++  .++||++||..+..+.++.+.|+++
T Consensus        85 ~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~s  163 (257)
T PRK09242         85 HWDGLHILVNNAGGNI-RKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPYGMT  163 (257)
T ss_pred             HcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCCCcchHHH
Confidence            9999999999999864 456778899999999999999999999999999954  4799999999999888999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchhh----hhhccCCCCCchhhhccc
Q 027248          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVV----SSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       164 Kaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~----~~~~~~~~~~p~~~a~av  225 (226)
                      |++++.|+++++.|+.+ ||++++++||+++|++.+.........    ...+..++..|++++.++
T Consensus       164 K~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~  230 (257)
T PRK09242        164 KAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPMRRVGEPEEVAAAV  230 (257)
T ss_pred             HHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            99999999999999987 999999999999999977654433322    233445678899998764

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=100.00  E-value=9.4e-40  Score=249.99  Aligned_cols=207  Identities=28%  Similarity=0.467  Sum_probs=181.4

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      ++++||.+++||+.||||+++.++|+++|..+.++..+.|+.+. ..++.+.  ..++.+++||+++..++++.++++.+
T Consensus         1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a-~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~   79 (261)
T KOG4169|consen    1 MDLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEA-IAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILA   79 (261)
T ss_pred             CcccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHH-HHHHhccCCCceEEEEEeccccHHHHHHHHHHHHH
Confidence            36789999999999999999999999999998888888877544 4455544  34688999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc-----CCEEEEEeccCCcCCCCCCchh
Q 027248           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-----GSSVVLISSIAGYQPQSSMAMY  160 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~-----~~~iv~~sS~~~~~~~~~~~~Y  160 (226)
                      .+|.+|++||+||+..         ..+|++++++|+.|.++-+..++|+|.+     +|-||++||..|..|.|-.+.|
T Consensus        80 ~fg~iDIlINgAGi~~---------dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pVY  150 (261)
T KOG4169|consen   80 TFGTIDILINGAGILD---------DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPVY  150 (261)
T ss_pred             HhCceEEEEccccccc---------chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchhh
Confidence            9999999999999864         5679999999999999999999999954     4689999999999999999999


Q ss_pred             hHhHHHHHHHHHHHHHHh--CC-CeEEEEEecCceeCCccccccc-------CchhhhhhccCCCCCchhhhcc
Q 027248          161 GVTKTALLGLTKALAAEM--AP-DTRVNCVAPGFVPTHFAEYITS-------NDGVVSSVSSLKLSPPSSLTLA  224 (226)
Q Consensus       161 ~~sKaa~~~~~~~la~e~--~~-~i~v~~v~Pg~v~t~~~~~~~~-------~~~~~~~~~~~~~~~p~~~a~a  224 (226)
                      ++||+++.+|+|+|+.+.  .+ ||++++||||++.|++.+.+..       .+.+.+.+.+.+..+|+++|..
T Consensus       151 ~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~~~l~~~~~q~~~~~a~~  224 (261)
T KOG4169|consen  151 AASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIKEALERAPKQSPACCAIN  224 (261)
T ss_pred             hhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCCcccccHHHHHHHHHcccCCHHHHHHH
Confidence            999999999999999885  34 9999999999999999887743       3446677778888888888764

>PRK07831 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.1e-38  Score=254.39  Aligned_cols=216  Identities=28%  Similarity=0.430  Sum_probs=187.6

Q ss_pred             ccCCCEEEEEcCCC-chhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhc-C-CcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248            9 RFQGKVAIVTASTQ-GIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-G-IEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus         9 ~~~gk~vlItGa~~-giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      .+++|+++||||+| |||+++++.|+++|++|++++|+.++++...+++.+. + .++..+++|++++++++.+++++.+
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   93 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE   93 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            45689999999985 9999999999999999999999998888877777653 3 3678899999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc---CCEEEEEeccCCcCCCCCCchhhH
Q 027248           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGV  162 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~---~~~iv~~sS~~~~~~~~~~~~Y~~  162 (226)
                      .++++|+||||||... ..++.+.+.++|++++++|+.+++.++++++|.|++   .++||++||..+..+.++...|++
T Consensus        94 ~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~  172 (262)
T PRK07831         94 RLGRLDVLVNNAGLGG-QTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHYAA  172 (262)
T ss_pred             HcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCCcchHH
Confidence            9999999999999865 467788899999999999999999999999999854   479999999998888889999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCc---hhhhhhccCCCCCchhhhccc
Q 027248          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND---GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       163 sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ||+|+++|+++|+.|+.+ ||+||+|+||+++|++.+....+.   .+....+..+..+|+|+|+++
T Consensus       173 sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~r~~~p~~va~~~  239 (262)
T PRK07831        173 AKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTSAELLDELAAREAFGRAAEPWEVANVI  239 (262)
T ss_pred             HHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            999999999999999988 999999999999999876543222   122333456788999999875

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=100.00  E-value=2.7e-38  Score=256.45  Aligned_cols=212  Identities=24%  Similarity=0.336  Sum_probs=179.2

Q ss_pred             EEEEEcCCCchhHHHHHHHHh----CCCeEEEEecCcchHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248           14 VAIVTASTQGIGFGIAERLGL----EGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~----~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      +++||||++|||++++++|++    .|++|++++|+++.+++..+++...  +.++.++.+|+++.++++++++++.+.+
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   81 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP   81 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence            689999999999999999997    7999999999999888888888652  4467889999999999999999998877


Q ss_pred             CCC----CEEEEcCCCCCCCC-cccc-ccHHHHHHHHHHHHHHHHHHHHHHhhhhhc----CCEEEEEeccCCcCCCCCC
Q 027248           88 GKI----DVVVSNAAANPSVD-SILQ-TKESVLDKLWDINVKSSILLLQDAAPHLQK----GSSVVLISSIAGYQPQSSM  157 (226)
Q Consensus        88 ~~i----d~li~nag~~~~~~-~~~~-~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~----~~~iv~~sS~~~~~~~~~~  157 (226)
                      +.+    |+||||||...... ...+ .+.++|++++++|+.+++++++.++|.|++    .++||++||..+..+.++.
T Consensus        82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~~~  161 (256)
T TIGR01500        82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKGW  161 (256)
T ss_pred             ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCCCc
Confidence            643    69999999754222 2333 357899999999999999999999999864    3689999999999899999


Q ss_pred             chhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC-------chhhhhhccCCCCCchhhhccc
Q 027248          158 AMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN-------DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       158 ~~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~-------~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ..|++||+|+++|+++|+.|+.+ ||+||+|+||+++|+|.+...+.       ..+....+..++.+|+|+|.++
T Consensus       162 ~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~~  237 (256)
T TIGR01500       162 ALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQELKAKGKLVDPKVSAQKL  237 (256)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCChhHHHHHHHHHhcCCCCCHHHHHHHH
Confidence            99999999999999999999988 99999999999999987654221       1233445667899999999764

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PLN02253 xanthoxin dehydrogenase

Probab=100.00  E-value=6.6e-38  Score=257.26  Aligned_cols=216  Identities=29%  Similarity=0.358  Sum_probs=181.9

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      +++||+++||||++|||++++++|+++|++|++++|+.+..++..+++. .+.++.++++|++++++++++++++.+.++
T Consensus        15 ~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g   93 (280)
T PLN02253         15 RLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLG-GEPNVCFFHCDVTVEDDVSRAVDFTVDKFG   93 (280)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhc-CCCceEEEEeecCCHHHHHHHHHHHHHHhC
Confidence            5679999999999999999999999999999999998877766666553 245688999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCC-CCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHH
Q 027248           89 KIDVVVSNAAANPS-VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKT  165 (226)
Q Consensus        89 ~id~li~nag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKa  165 (226)
                      ++|+||||||.... ..++.+.+.++|++++++|+.|++++++++.|.|.+  .++|+++||..+..+.++...|++||+
T Consensus        94 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~  173 (280)
T PLN02253         94 TLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGPHAYTGSKH  173 (280)
T ss_pred             CCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCCCcccHHHHH
Confidence            99999999998642 245778899999999999999999999999999843  579999999998888888889999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch----h----hhhh-----ccCCCCCchhhhccc
Q 027248          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG----V----VSSV-----SSLKLSPPSSLTLAV  225 (226)
Q Consensus       166 a~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~----~----~~~~-----~~~~~~~p~~~a~av  225 (226)
                      |+++++++|+.|+.+ +|+|++++||+++|++.....+...    .    ....     .......|+|+|.++
T Consensus       174 a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~dva~~~  247 (280)
T PLN02253        174 AVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGVELTVDDVANAV  247 (280)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCCCcCCCCCHHHHHHHH
Confidence            999999999999988 9999999999999997643322211    0    0001     113457899999875

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=100.00  E-value=3.4e-39  Score=259.58  Aligned_cols=206  Identities=36%  Similarity=0.569  Sum_probs=184.7

Q ss_pred             cCC--CchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh-CCCCEEEE
Q 027248           19 AST--QGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF-GKIDVVVS   95 (226)
Q Consensus        19 Ga~--~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-~~id~li~   95 (226)
                      |++  +|||++++++|+++|++|++++|+.++++...+++.+..+.- ++.+|++++++++.+++++.+.+ |++|+|||
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~   79 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAE-VIQCDLSDEESVEALFDEAVERFGGRIDILVN   79 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSE-EEESCTTSHHHHHHHHHHHHHHHCSSESEEEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCc-eEeecCcchHHHHHHHHHHHhhcCCCeEEEEe
Confidence            566  999999999999999999999999998877777777654433 59999999999999999999999 99999999


Q ss_pred             cCCCCCC---CCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHhHHHHHHHHH
Q 027248           96 NAAANPS---VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTK  172 (226)
Q Consensus        96 nag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~  172 (226)
                      |+|....   ..++.+.+.++|++.+++|+.+++.+++++.|+|+++++||++||..+..+.+++..|+++|+|+++|+|
T Consensus        80 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~~~~~~~y~~sKaal~~l~r  159 (241)
T PF13561_consen   80 NAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRPMPGYSAYSASKAALEGLTR  159 (241)
T ss_dssp             EEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSBSTTTHHHHHHHHHHHHHHH
T ss_pred             cccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcccCccchhhHHHHHHHHHHHH
Confidence            9998763   4788899999999999999999999999999999889999999999999999999999999999999999


Q ss_pred             HHHHHhCC--CeEEEEEecCceeCCcccccccCc----hhhhhhccCCCCCchhhhccc
Q 027248          173 ALAAEMAP--DTRVNCVAPGFVPTHFAEYITSND----GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       173 ~la~e~~~--~i~v~~v~Pg~v~t~~~~~~~~~~----~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +|+.|+++  |||||+|+||+++|++.+.....+    .+.+..+.+++.+|+|||+++
T Consensus       160 ~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl~r~~~~~evA~~v  218 (241)
T PF13561_consen  160 SLAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPLGRLGTPEEVANAV  218 (241)
T ss_dssp             HHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTTSSHBEHHHHHHHH
T ss_pred             HHHHHhccccCeeeeeecccceeccchhccccccchhhhhhhhhccCCCcCHHHHHHHH
Confidence            99999988  999999999999999876654322    245666778888999999875

...

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=100.00  E-value=9.7e-38  Score=252.97  Aligned_cols=215  Identities=27%  Similarity=0.418  Sum_probs=187.7

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      .+++|+++||||++|||++++++|+++|++|++++|+.+..+...+++...+.++.++.+|++++++++++++.+.+.++
T Consensus         8 ~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   87 (255)
T PRK06113          8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLG   87 (255)
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            46799999999999999999999999999999999999888888777776667788899999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa  166 (226)
                      ++|++|||||... ..++ +.+.++|++.+++|+.+++++++++.|+|++  .++||++||..+..+.++...|++||+|
T Consensus        88 ~~d~li~~ag~~~-~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  165 (255)
T PRK06113         88 KVDILVNNAGGGG-PKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAA  165 (255)
T ss_pred             CCCEEEECCCCCC-CCCC-CCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCcchhHHHHHH
Confidence            9999999999865 2333 6788999999999999999999999999854  4699999999999888899999999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch---hhhhhccCCCCCchhhhccc
Q 027248          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG---VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       167 ~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~---~~~~~~~~~~~~p~~~a~av  225 (226)
                      +++|+++++.|+.+ +|+||+|+||+++|++.+....+..   ..+..+..++..|+|+|+++
T Consensus       166 ~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~  228 (255)
T PRK06113        166 ASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAA  228 (255)
T ss_pred             HHHHHHHHHHHhhhhCeEEEEEecccccccccccccCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            99999999999988 9999999999999998765432221   22334456678999999864

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-37  Score=252.10  Aligned_cols=218  Identities=26%  Similarity=0.429  Sum_probs=192.4

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      +.+++||+++||||+++||++++++|+++|++|++++|+++.++...+++.+.+.++.++.+|+++++++.++++++.+.
T Consensus         6 ~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   85 (256)
T PRK06124          6 RFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAE   85 (256)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            44578999999999999999999999999999999999998888888888777777889999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhH
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTK  164 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sK  164 (226)
                      ++++|++|||+|... ..++.+.+.++|++.+++|+.+++.+.+.+++.|.+  .++||++||..+..+.++...|++||
T Consensus        86 ~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK  164 (256)
T PRK06124         86 HGRLDILVNNVGARD-RRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGDAVYPAAK  164 (256)
T ss_pred             cCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCCCccHhHHHH
Confidence            999999999999865 467888899999999999999999999999999843  57999999999988889999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch----hhhhhccCCCCCchhhhccc
Q 027248          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG----VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       165 aa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~----~~~~~~~~~~~~p~~~a~av  225 (226)
                      ++++++++.++.|+.+ +|++++|+||+++|++.+.......    +....+..++..|+|++.++
T Consensus       165 ~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~  230 (256)
T PRK06124        165 QGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPAVGPWLAQRTPLGRWGRPEEIAGAA  230 (256)
T ss_pred             HHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence            9999999999999988 9999999999999998655433222    23334556788899988764

>PRK06940 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.2e-38  Score=256.66  Aligned_cols=203  Identities=22%  Similarity=0.364  Sum_probs=171.9

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id   91 (226)
                      +|+++|||+ +|||++++++|+ +|++|++++|+.+++++..+++.+.+.++.++.+|++++++++++++++ +.++++|
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~-~~~g~id   78 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATA-QTLGPVT   78 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH-HhcCCCC
Confidence            489999998 699999999996 8999999999988888877777766667889999999999999999988 5689999


Q ss_pred             EEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCC-----------------
Q 027248           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQ-----------------  154 (226)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~-----------------  154 (226)
                      +||||||+..        ..++|++++++|+.+++++++++.|+|++++++|++||..+..+.                 
T Consensus        79 ~li~nAG~~~--------~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~  150 (275)
T PRK06940         79 GLVHTAGVSP--------SQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEE  150 (275)
T ss_pred             EEEECCCcCC--------chhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhcccccccccc
Confidence            9999999752        236799999999999999999999999877889999999876542                 


Q ss_pred             -------------CCCchhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCccccccc-Cc-----hhhhhhccCC
Q 027248          155 -------------SSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS-ND-----GVVSSVSSLK  214 (226)
Q Consensus       155 -------------~~~~~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~-~~-----~~~~~~~~~~  214 (226)
                                   ++...|++||+|++++++.|+.|+.+ ||+||+|+||+++|++...... ..     ......+..+
T Consensus       151 ~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r  230 (275)
T PRK06940        151 LLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKSPAGR  230 (275)
T ss_pred             ccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhhCCccc
Confidence                         24678999999999999999999988 9999999999999998754221 11     1222345577


Q ss_pred             CCCchhhhccc
Q 027248          215 LSPPSSLTLAV  225 (226)
Q Consensus       215 ~~~p~~~a~av  225 (226)
                      +.+|+|+|+++
T Consensus       231 ~~~peeia~~~  241 (275)
T PRK06940        231 PGTPDEIAALA  241 (275)
T ss_pred             CCCHHHHHHHH
Confidence            89999999875

>PRK07856 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.4e-38  Score=252.93  Aligned_cols=208  Identities=33%  Similarity=0.512  Sum_probs=180.4

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      +++||+++||||++|||++++++|+++|++|++++|+.++        ...+..+.++++|++++++++++++.+.+.++
T Consensus         3 ~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   74 (252)
T PRK07856          3 DLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE--------TVDGRPAEFHAADVRDPDQVAALVDAIVERHG   74 (252)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh--------hhcCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999999999999999999999998754        12244678899999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc---CCEEEEEeccCCcCCCCCCchhhHhHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKT  165 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~---~~~iv~~sS~~~~~~~~~~~~Y~~sKa  165 (226)
                      ++|+||||||+.. ..++.+.+.++|++++++|+.+++.+++++.|.|.+   .++||++||..+..+.++...|++||+
T Consensus        75 ~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~  153 (252)
T PRK07856         75 RLDVLVNNAGGSP-YALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAKA  153 (252)
T ss_pred             CCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCCCchhHHHHH
Confidence            9999999999865 466778889999999999999999999999998854   379999999999989999999999999


Q ss_pred             HHHHHHHHHHHHhCCCeEEEEEecCceeCCcccccccCch----hhhhhccCCCCCchhhhccc
Q 027248          166 ALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDG----VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       166 a~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~~~~~~~~~----~~~~~~~~~~~~p~~~a~av  225 (226)
                      ++++|++.++.|+.+.|++|+++||+++|++.........    +....+..++.+|+|+|+++
T Consensus       154 a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~  217 (252)
T PRK07856        154 GLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVPLGRLATPADIAWAC  217 (252)
T ss_pred             HHHHHHHHHHHHhcCCeEEEEEEeccccChHHhhhccCHHHHHHHhhcCCCCCCcCHHHHHHHH
Confidence            9999999999999777999999999999998654433222    22334556788999999764

>PRK08278 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-37  Score=255.15  Aligned_cols=211  Identities=25%  Similarity=0.396  Sum_probs=181.9

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcch-------HHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHH
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN-------VDEAVVKLKARGIEVIGVVCHVSNGQQRKNLIN   81 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   81 (226)
                      +++||+++||||++|||++++++|+++|++|++++|+.+.       ++...+++...+.++.++.+|++++++++++++
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~   82 (273)
T PRK08278          3 SLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVA   82 (273)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHH
Confidence            3578999999999999999999999999999999998653       445556666667788899999999999999999


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCC--CCC
Q 027248           82 QTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQ--SSM  157 (226)
Q Consensus        82 ~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~--~~~  157 (226)
                      ++.+.++++|+||||||... ..+..+.+.++|++++++|+.+++.++++++|+|++  +++|+++||..+..+.  ++.
T Consensus        83 ~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  161 (273)
T PRK08278         83 KAVERFGGIDICVNNASAIN-LTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPKWFAPH  161 (273)
T ss_pred             HHHHHhCCCCEEEECCCCcC-CCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccccccCCc
Confidence            99999999999999999865 466778899999999999999999999999999854  4799999999877776  888


Q ss_pred             chhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecC-ceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          158 AMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPG-FVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       158 ~~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg-~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +.|++||+++++|+++|+.|+.+ +|+||+|+|| +++|++.+......     ....+..+|+++|+++
T Consensus       162 ~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~~~~~~-----~~~~~~~~p~~va~~~  226 (273)
T PRK08278        162 TAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRNLLGGD-----EAMRRSRTPEIMADAA  226 (273)
T ss_pred             chhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHhccccc-----ccccccCCHHHHHHHH
Confidence            99999999999999999999998 9999999999 68998766543221     1234578999998864

>PRK05717 oxidoreductase; Validated

Probab=100.00  E-value=1.8e-37  Score=251.41  Aligned_cols=216  Identities=25%  Similarity=0.376  Sum_probs=183.4

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      +.+++||+++||||+++||++++++|+++|++|++++|++++.+...+++   +.++.++.+|+++.++++.+++++.++
T Consensus         5 ~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~   81 (255)
T PRK05717          5 NPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL---GENAWFIAMDVADEAQVAAGVAEVLGQ   81 (255)
T ss_pred             CcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc---CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            45688999999999999999999999999999999999877665554433   446788999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCC-CCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc-CCEEEEEeccCCcCCCCCCchhhHhH
Q 027248           87 FGKIDVVVSNAAANPS-VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-GSSVVLISSIAGYQPQSSMAMYGVTK  164 (226)
Q Consensus        87 ~~~id~li~nag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK  164 (226)
                      ++++|++|||||+... ..++.+.+.++|++++++|+.+++.+++++.|+|++ .++||++||..+..+.++...|++||
T Consensus        82 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~~~~~~Y~~sK  161 (255)
T PRK05717         82 FGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSEPDTEAYAASK  161 (255)
T ss_pred             hCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCCCCCcchHHHH
Confidence            9999999999998642 256778899999999999999999999999999854 58999999999988888999999999


Q ss_pred             HHHHHHHHHHHHHhCCCeEEEEEecCceeCCcccccccCch---hhhhhccCCCCCchhhhccc
Q 027248          165 TALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDG---VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       165 aa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~~~~~~~~~---~~~~~~~~~~~~p~~~a~av  225 (226)
                      ++++++++.++.|+.++|+|++++||+++|++.........   .....+..++..|+|+|.++
T Consensus       162 aa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~  225 (255)
T PRK05717        162 GGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQRRAEPLSEADHAQHPAGRVGTVEDVAAMV  225 (255)
T ss_pred             HHHHHHHHHHHHHhcCCCEEEEEecccCcCCccccccchHHHHHHhhcCCCCCCcCHHHHHHHH
Confidence            99999999999999878999999999999997543211110   11233456788999998764

>PRK06701 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-37  Score=255.48  Aligned_cols=218  Identities=27%  Similarity=0.431  Sum_probs=188.2

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcc-hHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK-NVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      .+++||+++||||++|||++++++|+++|++|++++|+.+ ..+.....+...+.++.++.+|+++.++++.+++++.+.
T Consensus        42 ~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~  121 (290)
T PRK06701         42 GKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRE  121 (290)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999864 344555555555667889999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHhHHH
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa  166 (226)
                      ++++|+||||||......++.+.+.++|.+++++|+.+++.+++++++.|++.++||++||..+..+.++...|++||+|
T Consensus       122 ~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sK~a  201 (290)
T PRK06701        122 LGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNETLIDYSATKGA  201 (290)
T ss_pred             cCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCCCcchhHHHHHH
Confidence            99999999999986544667889999999999999999999999999999777899999999998888899999999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch---hhhhhccCCCCCchhhhccc
Q 027248          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG---VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       167 ~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~---~~~~~~~~~~~~p~~~a~av  225 (226)
                      ++.|+++++.++.+ ||+|++|+||+++|++.+.......   +....+..++..|+|+|+++
T Consensus       202 ~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  264 (290)
T PRK06701        202 IHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFDEEKVSQFGSNTPMQRPGQPEELAPAY  264 (290)
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccCHHHHHHHHhcCCcCCCcCHHHHHHHH
Confidence            99999999999988 9999999999999998765332211   22333556688899998764

>PRK07576 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-37  Score=252.35  Aligned_cols=217  Identities=31%  Similarity=0.416  Sum_probs=186.3

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      +++++|+++||||++|||.+++++|+++|++|++++|+++.++...+++.+.+.++.++.+|++++++++.+++++.+.+
T Consensus         5 ~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~   84 (264)
T PRK07576          5 FDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEF   84 (264)
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            46889999999999999999999999999999999999888777777776666677889999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc-CCEEEEEeccCCcCCCCCCchhhHhHHH
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-GSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~-~~~iv~~sS~~~~~~~~~~~~Y~~sKaa  166 (226)
                      +++|++|||||... ..++.+.+.++|++++++|+.++++++++++|.|++ +++||++||..+..+.++...|+++|++
T Consensus        85 ~~iD~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~~~~~~~Y~asK~a  163 (264)
T PRK07576         85 GPIDVLVSGAAGNF-PAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVPMPMQAHVCAAKAG  163 (264)
T ss_pred             CCCCEEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccCCCCccHHHHHHHH
Confidence            99999999999764 466778889999999999999999999999999863 5799999999888888999999999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCcee-CCcccccccCch----hhhhhccCCCCCchhhhccc
Q 027248          167 LLGLTKALAAEMAP-DTRVNCVAPGFVP-THFAEYITSNDG----VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       167 ~~~~~~~la~e~~~-~i~v~~v~Pg~v~-t~~~~~~~~~~~----~~~~~~~~~~~~p~~~a~av  225 (226)
                      ++.|+++++.|+.+ ||++++|+||+++ |+......+...    +.+..+..+..+|+|+|.++
T Consensus       164 ~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  228 (264)
T PRK07576        164 VDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVAQSVPLKRNGTKQDIANAA  228 (264)
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence            99999999999987 9999999999997 664433322211    22333455678899988653

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.9e-37  Score=257.72  Aligned_cols=217  Identities=23%  Similarity=0.337  Sum_probs=183.3

Q ss_pred             ccccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCc-chHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHH
Q 027248            5 KMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ-KNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQT   83 (226)
Q Consensus         5 ~~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   83 (226)
                      .|..+++||+++||||++|||++++++|+++|++|++.+++. +..+...+++...+.++..+.+|+++.++++++++++
T Consensus         5 ~~~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~   84 (306)
T PRK07792          5 TNTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATA   84 (306)
T ss_pred             cCCcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHH
Confidence            355678999999999999999999999999999999998854 4566777777777778889999999999999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc---------CCEEEEEeccCCcCCC
Q 027248           84 IEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---------GSSVVLISSIAGYQPQ  154 (226)
Q Consensus        84 ~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~---------~~~iv~~sS~~~~~~~  154 (226)
                      .+ ++++|+||||||+.. ...+.+.+.++|++++++|+.+++++++++.|+|++         .|+||++||.++..+.
T Consensus        85 ~~-~g~iD~li~nAG~~~-~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  162 (306)
T PRK07792         85 VG-LGGLDIVVNNAGITR-DRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGP  162 (306)
T ss_pred             HH-hCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCC
Confidence            98 999999999999876 456778899999999999999999999999998853         2699999999998888


Q ss_pred             CCCchhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          155 SSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       155 ~~~~~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ++...|++||+|+++|++.++.|+.+ ||+||+|+||. .|+|........... ........+|+++|.++
T Consensus       163 ~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~~~~~~~~~~~~~-~~~~~~~~~pe~va~~v  232 (306)
T PRK07792        163 VGQANYGAAKAGITALTLSAARALGRYGVRANAICPRA-RTAMTADVFGDAPDV-EAGGIDPLSPEHVVPLV  232 (306)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCchhhhhccccchh-hhhccCCCCHHHHHHHH
Confidence            89999999999999999999999988 99999999994 888865543221100 01122345789988754

>PRK12743 oxidoreductase; Provisional

Probab=100.00  E-value=3.8e-37  Score=249.70  Aligned_cols=213  Identities=27%  Similarity=0.361  Sum_probs=183.9

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEec-CcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSR-KQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      +|+++||||++|||++++++|+++|++|+++.+ +.+..+...+++...+.++.++.+|++++++++.+++++.+.++++
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI   81 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            589999999999999999999999999988865 4556666777777777789999999999999999999999999999


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc---CCEEEEEeccCCcCCCCCCchhhHhHHHH
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~---~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~  167 (226)
                      |+||||+|... ..++.+.+.++|++++++|+.+++++.+++.++|.+   +++||++||..+..+.++...|+++|+++
T Consensus        82 d~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~  160 (256)
T PRK12743         82 DVLVNNAGAMT-KAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKHAL  160 (256)
T ss_pred             CEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCCcchhHHHHHHH
Confidence            99999999875 456778899999999999999999999999999853   47999999999988889999999999999


Q ss_pred             HHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCc--hhhhhhccCCCCCchhhhccc
Q 027248          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND--GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       168 ~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~--~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ++++++++.++.+ ||++++|+||+++|++........  ......+..+..+|+|+|+++
T Consensus       161 ~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  221 (256)
T PRK12743        161 GGLTKAMALELVEHGILVNAVAPGAIATPMNGMDDSDVKPDSRPGIPLGRPGDTHEIASLV  221 (256)
T ss_pred             HHHHHHHHHHhhhhCeEEEEEEeCCccCccccccChHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence            9999999999988 999999999999999865421111  112234456678999999764

>PRK08628 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-37  Score=251.93  Aligned_cols=217  Identities=27%  Similarity=0.333  Sum_probs=184.3

Q ss_pred             cccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus         6 ~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      |+.+++||+++||||++|||++++++|+++|++|++++|++++. +..+++...+.++.++.+|++++++++.+++++.+
T Consensus         1 ~~~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (258)
T PRK08628          1 MDLNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVA   79 (258)
T ss_pred             CCCCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            34568899999999999999999999999999999999998776 66677766677888999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc-CCEEEEEeccCCcCCCCCCchhhHhH
Q 027248           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-GSSVVLISSIAGYQPQSSMAMYGVTK  164 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK  164 (226)
                      .++.+|++|||||... ...+.... ++|++.+++|+.+++.+.+.+.|.+++ .++|+++||..+..+.++...|++||
T Consensus        80 ~~~~id~vi~~ag~~~-~~~~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK  157 (258)
T PRK08628         80 KFGRIDGLVNNAGVND-GVGLEAGR-EAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQGGTSGYAAAK  157 (258)
T ss_pred             hcCCCCEEEECCcccC-CCcccCCH-HHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCCCCCchhHHHH
Confidence            9999999999999754 33444454 999999999999999999999998864 57999999999988888999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCceeCCccccccc---C-chh----hhhhcc-CCCCCchhhhccc
Q 027248          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS---N-DGV----VSSVSS-LKLSPPSSLTLAV  225 (226)
Q Consensus       165 aa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~---~-~~~----~~~~~~-~~~~~p~~~a~av  225 (226)
                      ++++++++.++.|+.+ +|+++.|+||+++|++.+.+..   . ...    .+.++. .++.+|+++|+++
T Consensus       158 ~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  228 (258)
T PRK08628        158 GAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGHRMTTAEEIADTA  228 (258)
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCCccccCCCHHHHHHHH
Confidence            9999999999999987 9999999999999998654321   1 111    112222 3678999999864

>PRK06483 dihydromonapterin reductase; Provisional

Probab=100.00  E-value=1.6e-37  Score=248.94  Aligned_cols=208  Identities=19%  Similarity=0.221  Sum_probs=173.0

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id   91 (226)
                      +|+++||||++|||++++++|+++|++|++++|+++...   +++...+  +.++.+|++++++++.+++++.+.++++|
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---~~~~~~~--~~~~~~D~~~~~~~~~~~~~~~~~~~~id   76 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAI---DGLRQAG--AQCIQADFSTNAGIMAFIDELKQHTDGLR   76 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHH---HHHHHcC--CEEEEcCCCCHHHHHHHHHHHHhhCCCcc
Confidence            589999999999999999999999999999999876543   2333323  56789999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc----CCEEEEEeccCCcCCCCCCchhhHhHHHH
Q 027248           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK----GSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (226)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~----~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~  167 (226)
                      ++|||||... .....+.+.++|++++++|+.+++.+++.++|.|++    .++||++||..+..+.++...|++||+++
T Consensus        77 ~lv~~ag~~~-~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~asKaal  155 (236)
T PRK06483         77 AIIHNASDWL-AEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDKHIAYAASKAAL  155 (236)
T ss_pred             EEEECCcccc-CCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCCCccHHHHHHHH
Confidence            9999999864 334567788999999999999999999999999864    36899999999888888999999999999


Q ss_pred             HHHHHHHHHHhCCCeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          168 LGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       168 ~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ++|+++++.|++++|+||+|+||++.|+....-..........+..+...|+|+|+++
T Consensus       156 ~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~  213 (236)
T PRK06483        156 DNMTLSFAAKLAPEVKVNSIAPALILFNEGDDAAYRQKALAKSLLKIEPGEEEIIDLV  213 (236)
T ss_pred             HHHHHHHHHHHCCCcEEEEEccCceecCCCCCHHHHHHHhccCccccCCCHHHHHHHH
Confidence            9999999999988999999999999886432100011122233455678999999875

>PRK07814 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.5e-37  Score=250.23  Aligned_cols=217  Identities=29%  Similarity=0.463  Sum_probs=189.2

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      .++++|+++||||++|||++++++|+++|++|++++|+.++++...+++...+.++.++.+|++++++++++++++.+.+
T Consensus         6 ~~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   85 (263)
T PRK07814          6 FRLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAF   85 (263)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            34679999999999999999999999999999999999888888777776666678889999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc---CCEEEEEeccCCcCCCCCCchhhHhH
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTK  164 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~---~~~iv~~sS~~~~~~~~~~~~Y~~sK  164 (226)
                      +++|+||||||... ...+.+.+.++|++++++|+.+++.+.+++.|.|.+   .++||++||..+..+.++...|++||
T Consensus        86 ~~id~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK  164 (263)
T PRK07814         86 GRLDIVVNNVGGTM-PNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTAK  164 (263)
T ss_pred             CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCCCCchhHHHH
Confidence            99999999999865 466778889999999999999999999999999854   47999999999988889999999999


Q ss_pred             HHHHHHHHHHHHHhCCCeEEEEEecCceeCCcccccccCchh----hhhhccCCCCCchhhhccc
Q 027248          165 TALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGV----VSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       165 aa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~----~~~~~~~~~~~p~~~a~av  225 (226)
                      ++++++++.++.|+.++|++++|+||+++|++.........+    ....+..++.+|+|+|+++
T Consensus       165 ~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~  229 (263)
T PRK07814        165 AALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVVAANDELRAPMEKATPLRRLGDPEDIAAAA  229 (263)
T ss_pred             HHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            999999999999998899999999999999986544322222    2233445678899998764

>PRK07890 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-37  Score=250.23  Aligned_cols=217  Identities=28%  Similarity=0.442  Sum_probs=188.5

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      .+++|+++||||++|||++++++|+++|++|++++|++++.+...+++...+.++..+.+|++++++++.+++++.+.++
T Consensus         2 ~l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (258)
T PRK07890          2 LLKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFG   81 (258)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence            35689999999999999999999999999999999999888888777776667788999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc-CCEEEEEeccCCcCCCCCCchhhHhHHHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-GSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~-~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~  167 (226)
                      ++|++|||||......++.+.+.++|++++++|+.+++.+++++.+.|++ .++||++||..+..+.++...|+++|+++
T Consensus        82 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~  161 (258)
T PRK07890         82 RVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHSQPKYGAYKMAKGAL  161 (258)
T ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccCCCCcchhHHHHHHH
Confidence            99999999998654467778899999999999999999999999999854 57999999999988889999999999999


Q ss_pred             HHHHHHHHHHhCC-CeEEEEEecCceeCCccccccc---------Cch----hhhhhccCCCCCchhhhccc
Q 027248          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS---------NDG----VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       168 ~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~---------~~~----~~~~~~~~~~~~p~~~a~av  225 (226)
                      +.+++.++.|+.+ +|++++++||++.|++......         ...    +.+..+..++.+|+|+|+++
T Consensus       162 ~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~  233 (258)
T PRK07890        162 LAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLPTDDEVASAV  233 (258)
T ss_pred             HHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcCCccccCCHHHHHHHH
Confidence            9999999999988 9999999999999997543211         011    12234455678899988864

>PLN02780 ketoreductase/ oxidoreductase

Probab=100.00  E-value=2.1e-37  Score=258.72  Aligned_cols=203  Identities=23%  Similarity=0.342  Sum_probs=168.0

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcC--CcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG--IEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      .||+++||||++|||++++++|+++|++|++++|+++++++..+++.+..  .++..+.+|+++  ++++.++++.+..+
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~l~~~~~  129 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--DIDEGVKRIKETIE  129 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC--CcHHHHHHHHHHhc
Confidence            58999999999999999999999999999999999999998888886643  467788999985  23334444555444


Q ss_pred             --CCCEEEEcCCCCCC-CCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcC-C-CCCCchhh
Q 027248           89 --KIDVVVSNAAANPS-VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQ-P-QSSMAMYG  161 (226)
Q Consensus        89 --~id~li~nag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~-~-~~~~~~Y~  161 (226)
                        ++|+||||||+... ...+.+.+.+++++++++|+.|++.++++++|.|.+  .|+||++||.++.. + .|+.+.|+
T Consensus       130 ~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~p~~~~Y~  209 (320)
T PLN02780        130 GLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDPLYAVYA  209 (320)
T ss_pred             CCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCccchHHH
Confidence              46699999998642 246778899999999999999999999999999854  58999999998864 3 57899999


Q ss_pred             HhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhcc
Q 027248          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLA  224 (226)
Q Consensus       162 ~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~a  224 (226)
                      +||+++++|+++|+.|+.+ ||+|++|+||+++|+|....  ..       .....+|+++|+.
T Consensus       210 aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~~--~~-------~~~~~~p~~~A~~  264 (320)
T PLN02780        210 ATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASIR--RS-------SFLVPSSDGYARA  264 (320)
T ss_pred             HHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCccccc--CC-------CCCCCCHHHHHHH
Confidence            9999999999999999988 99999999999999986521  11       1124578887764

>PRK07825 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.1e-37  Score=251.66  Aligned_cols=205  Identities=29%  Similarity=0.428  Sum_probs=180.2

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      +++||+++||||++|||++++++|+++|++|++++|++++++...+++.    ++.++.+|++++++++.+++++.+.++
T Consensus         2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~~   77 (273)
T PRK07825          2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG----LVVGGPLDVTDPASFAAFLDAVEADLG   77 (273)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc----cceEEEccCCCHHHHHHHHHHHHHHcC
Confidence            3568999999999999999999999999999999999888776655553    467889999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa  166 (226)
                      ++|++|||||+.. ..++.+.+.+++++++++|+.|++.+++.++|.|.+  .++||++||..+..+.++...|++||++
T Consensus        78 ~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  156 (273)
T PRK07825         78 PIDVLVNNAGVMP-VGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASKHA  156 (273)
T ss_pred             CCCEEEECCCcCC-CCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCCCCcchHHHHHH
Confidence            9999999999875 567788899999999999999999999999999854  4799999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       167 ~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +++|+++|+.|+.+ ||+++.|+||+++|++.......       ......+|+++|+++
T Consensus       157 ~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~~~~-------~~~~~~~~~~va~~~  209 (273)
T PRK07825        157 VVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGTGGA-------KGFKNVEPEDVAAAI  209 (273)
T ss_pred             HHHHHHHHHHHhhccCcEEEEEeCCcCcchhhcccccc-------cCCCCCCHHHHHHHH
Confidence            99999999999988 99999999999999986543211       123467888887653

>PRK05866 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.5e-37  Score=253.54  Aligned_cols=211  Identities=17%  Similarity=0.297  Sum_probs=180.0

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      ...++||+++||||++|||++++++|+++|++|++++|+.+.++...+++...+.++.++.+|+++.++++++++++.+.
T Consensus        35 ~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~  114 (293)
T PRK05866         35 PVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKR  114 (293)
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            35578899999999999999999999999999999999998888888887766677889999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCccccc--cHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcC-CCCCCchhh
Q 027248           87 FGKIDVVVSNAAANPSVDSILQT--KESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQ-PQSSMAMYG  161 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~--~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~-~~~~~~~Y~  161 (226)
                      ++.+|++|||||+.. ..++.+.  +.++++.++++|+.|++.++++++|.|++  .++||++||.++.. +.++...|+
T Consensus       115 ~g~id~li~~AG~~~-~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~p~~~~Y~  193 (293)
T PRK05866        115 IGGVDILINNAGRSI-RRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEASPLFSVYN  193 (293)
T ss_pred             cCCCCEEEECCCCCC-CcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCCcchHH
Confidence            999999999999875 3444332  46789999999999999999999999964  47999999986654 367888999


Q ss_pred             HhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       162 ~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +||+|+++|+++++.|+.+ ||+|++++||+++|++.+.....       ......+|+++|+.+
T Consensus       194 asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~~~~-------~~~~~~~pe~vA~~~  251 (293)
T PRK05866        194 ASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPTKAY-------DGLPALTADEAAEWM  251 (293)
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccccccccc-------cCCCCCCHHHHHHHH
Confidence            9999999999999999988 99999999999999987542111       112356888888653

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=1.4e-37  Score=234.51  Aligned_cols=183  Identities=24%  Similarity=0.375  Sum_probs=167.3

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      .++|.+++||||++|||++++++|.+.|.+|++++|+++++++.+++.    +.+..+.||+.|.++.+++++++.++|+
T Consensus         2 k~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~----p~~~t~v~Dv~d~~~~~~lvewLkk~~P   77 (245)
T COG3967           2 KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAEN----PEIHTEVCDVADRDSRRELVEWLKKEYP   77 (245)
T ss_pred             cccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcC----cchheeeecccchhhHHHHHHHHHhhCC
Confidence            468999999999999999999999999999999999999988877665    4678899999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCcc-ccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHH
Q 027248           89 KIDVVVSNAAANPSVDSI-LQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKT  165 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~-~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKa  165 (226)
                      .+++||||||+....... .+.+.++.++.+.+|+.+|+++++.++|++.+  .+.||++||..++.|....+.||++||
T Consensus        78 ~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~~PvYcaTKA  157 (245)
T COG3967          78 NLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPVYCATKA  157 (245)
T ss_pred             chheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcccccccchhhHH
Confidence            999999999998643322 35556788999999999999999999999854  578999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCceeCC
Q 027248          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTH  195 (226)
Q Consensus       166 a~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~  195 (226)
                      |++.|+.+|+.+++. +|.|.-+.|..|+|+
T Consensus       158 aiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         158 AIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             HHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence            999999999999988 999999999999997

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-37  Score=250.53  Aligned_cols=213  Identities=31%  Similarity=0.465  Sum_probs=184.1

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      .+++|+++||||++|||++++++|+++|++|++++|+.+..+...+++   ..++.++.+|++++++++.+++++.+.++
T Consensus         3 ~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (257)
T PRK07067          3 RLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI---GPAAIAVSLDVTRQDSIDRIVAAAVERFG   79 (257)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            467899999999999999999999999999999999988777665554   34578899999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc---CCEEEEEeccCCcCCCCCCchhhHhHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKT  165 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~---~~~iv~~sS~~~~~~~~~~~~Y~~sKa  165 (226)
                      ++|++|||||... ..++.+.+.++|++++++|+.+++.+++++.+.|.+   +++||++||..+..+.++...|++||+
T Consensus        80 ~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  158 (257)
T PRK07067         80 GIDILFNNAALFD-MAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEALVSHYCATKA  158 (257)
T ss_pred             CCCEEEECCCcCC-CCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCCCCchhhhhHH
Confidence            9999999999875 467778899999999999999999999999998844   378999999988888899999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCceeCCccccccc---------Cc----hhhhhhccCCCCCchhhhccc
Q 027248          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS---------ND----GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       166 a~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~---------~~----~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +++++++.++.|+.+ ||++++|.||+++|++.+....         ..    ......+..++..|+|+|+++
T Consensus       159 a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  232 (257)
T PRK07067        159 AVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTGMA  232 (257)
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCCCccCHHHHHHHH
Confidence            999999999999988 9999999999999998654210         00    112234566788999999874

>PRK06523 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.4e-37  Score=250.29  Aligned_cols=212  Identities=23%  Similarity=0.347  Sum_probs=178.3

Q ss_pred             ccccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHH
Q 027248            5 KMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTI   84 (226)
Q Consensus         5 ~~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (226)
                      .+..+++||+++||||++|||++++++|+++|++|++++|+++..         ...++.++++|++++++++.+++++.
T Consensus         2 ~~~~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~---------~~~~~~~~~~D~~~~~~~~~~~~~~~   72 (260)
T PRK06523          2 SFFLELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD---------LPEGVEFVAADLTTAEGCAAVARAVL   72 (260)
T ss_pred             CcCcCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh---------cCCceeEEecCCCCHHHHHHHHHHHH
Confidence            345568899999999999999999999999999999999986531         13357789999999999999999999


Q ss_pred             HHhCCCCEEEEcCCCCC-CCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCC-CCchh
Q 027248           85 EKFGKIDVVVSNAAANP-SVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQS-SMAMY  160 (226)
Q Consensus        85 ~~~~~id~li~nag~~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~-~~~~Y  160 (226)
                      +.++++|+||||||... ...++.+.+.++|++++++|+.+++.++++++|+|++  .++||++||..+..+.+ +...|
T Consensus        73 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~~Y  152 (260)
T PRK06523         73 ERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPESTTAY  152 (260)
T ss_pred             HHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCCcchh
Confidence            99999999999999753 2345677889999999999999999999999999964  37899999999887755 78899


Q ss_pred             hHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC---------chhh-------hhhccCCCCCchhhhc
Q 027248          161 GVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN---------DGVV-------SSVSSLKLSPPSSLTL  223 (226)
Q Consensus       161 ~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~---------~~~~-------~~~~~~~~~~p~~~a~  223 (226)
                      ++||+++++|++.++.|+.+ ||++++|+||+++|++.......         ....       ...+..++.+|+|+|+
T Consensus       153 ~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~  232 (260)
T PRK06523        153 AAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPLGRPAEPEEVAE  232 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCccCCCCCHHHHHH
Confidence            99999999999999999988 99999999999999986432210         1111       1235567889999987


Q ss_pred             cc
Q 027248          224 AV  225 (226)
Q Consensus       224 av  225 (226)
                      ++
T Consensus       233 ~~  234 (260)
T PRK06523        233 LI  234 (260)
T ss_pred             HH
Confidence            64

>PRK12744 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.8e-37  Score=247.95  Aligned_cols=217  Identities=20%  Similarity=0.325  Sum_probs=176.3

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCc----chHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHH
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ----KNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQT   83 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~----~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   83 (226)
                      ..+++|+++||||++|||++++++|+++|++|++++++.    +..+...+++...+.++.++++|++++++++++++++
T Consensus         4 ~~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~   83 (257)
T PRK12744          4 HSLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDA   83 (257)
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHH
Confidence            346789999999999999999999999999977766543    3344455555555667888999999999999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHh
Q 027248           84 IEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVT  163 (226)
Q Consensus        84 ~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~s  163 (226)
                      .+.++++|++|||||... ..++.+.+.++|++++++|+.+++.+++++.|+|++.+++++++|..+..+.++...|++|
T Consensus        84 ~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~~~~~~Y~~s  162 (257)
T PRK12744         84 KAAFGRPDIAINTVGKVL-KKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFTPFYSAYAGS  162 (257)
T ss_pred             HHhhCCCCEEEECCcccC-CCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccCCCcccchhh
Confidence            999999999999999865 4677788899999999999999999999999999877888887544333456788999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch--h------hhhhccCCCCCchhhhccc
Q 027248          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG--V------VSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       164 Kaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~--~------~~~~~~~~~~~p~~~a~av  225 (226)
                      |+|+++|+++|+.|+.+ ||+|++++||+++|++.........  +      .......++.+|+|+|.++
T Consensus       163 K~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  233 (257)
T PRK12744        163 KAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVAYHKTAAALSPFSKTGLTDIEDIVPFI  233 (257)
T ss_pred             HHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccchhhcccccccccccccCCCCCHHHHHHHH
Confidence            99999999999999988 9999999999999997643221111  0      0111122678899998865

>PRK05855 short chain dehydrogenase; Validated

Probab=100.00  E-value=3.6e-37  Score=275.69  Aligned_cols=217  Identities=25%  Similarity=0.350  Sum_probs=189.7

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      ..+.+++++||||++|||++++++|+++|++|++++|+.+++++..+++...+.++.++.+|++++++++++++++.+.+
T Consensus       311 ~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  390 (582)
T PRK05855        311 GPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEH  390 (582)
T ss_pred             ccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            34678999999999999999999999999999999999988888888887777788999999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc---CCEEEEEeccCCcCCCCCCchhhHhH
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTK  164 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~---~~~iv~~sS~~~~~~~~~~~~Y~~sK  164 (226)
                      +++|+||||||+.. .+++.+.+.++|++++++|+.|+++++++++|.|.+   +|+||++||.++..+.++...|++||
T Consensus       391 g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK  469 (582)
T PRK05855        391 GVPDIVVNNAGIGM-AGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATSK  469 (582)
T ss_pred             CCCcEEEECCccCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCCcHHHHHH
Confidence            99999999999875 567888999999999999999999999999999864   37999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch----------hhhhhccCCCCCchhhhccc
Q 027248          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG----------VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       165 aa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~----------~~~~~~~~~~~~p~~~a~av  225 (226)
                      +|+++|+++|+.|+.+ ||+|++|+||+++|+|.+.......          ........+..+|+++|+++
T Consensus       470 aa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~  541 (582)
T PRK05855        470 AAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKLYQRRGYGPEKVAKAI  541 (582)
T ss_pred             HHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhhhccccCCCHHHHHHHH
Confidence            9999999999999988 9999999999999998765421100          01111223456899999875

>PRK06500 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.9e-37  Score=245.79  Aligned_cols=213  Identities=30%  Similarity=0.459  Sum_probs=182.7

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      .++||+++||||+++||++++++|+++|++|++++|+++.++...+++   +.++.++.+|+++.+++..+++.+.+.++
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (249)
T PRK06500          3 RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL---GESALVIRADAGDVAAQKALAQALAEAFG   79 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            356899999999999999999999999999999999877666555444   45678899999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHhHHHHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALL  168 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~  168 (226)
                      ++|++|||||... ..++.+.+.++|++++++|+.+++.+++++.|+|++.+++|+++|..+..+.++...|+++|++++
T Consensus        80 ~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~~~~~~Y~~sK~a~~  158 (249)
T PRK06500         80 RLDAVFINAGVAK-FAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGMPNSSVYAASKAALL  158 (249)
T ss_pred             CCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCCCCccHHHHHHHHHH
Confidence            9999999999865 466778899999999999999999999999999977789999999988888889999999999999


Q ss_pred             HHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCc----h----hhhhhccCCCCCchhhhccc
Q 027248          169 GLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND----G----VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       169 ~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~----~----~~~~~~~~~~~~p~~~a~av  225 (226)
                      +++++++.|+.+ ||++++++||.++|++.+......    .    .....+..++.+|+++|+++
T Consensus       159 ~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~  224 (249)
T PRK06500        159 SLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLGRFGTPEEIAKAV  224 (249)
T ss_pred             HHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            999999999987 999999999999999865432111    1    11222445678999998874

>PRK06841 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.3e-37  Score=246.97  Aligned_cols=214  Identities=30%  Similarity=0.454  Sum_probs=183.4

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      .+++||+++||||++|||++++++|+++|++|++++|+.+. .....++.  +.++..+.+|++++++++.+++++.+.+
T Consensus        11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~-~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   87 (255)
T PRK06841         11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDV-AEVAAQLL--GGNAKGLVCDVSDSQSVEAAVAAVISAF   87 (255)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHhh--CCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            45789999999999999999999999999999999998754 23333332  3456689999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHH
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKT  165 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKa  165 (226)
                      +++|++|||||... ..++.+.+.++|++++++|+.+++++++++.|.|++  .++||++||..+..+.++...|+++|+
T Consensus        88 ~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  166 (255)
T PRK06841         88 GRIDILVNSAGVAL-LAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERHVAYCASKA  166 (255)
T ss_pred             CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCCCchHHHHHH
Confidence            99999999999875 566778889999999999999999999999999854  479999999998889999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC---chhhhhhccCCCCCchhhhccc
Q 027248          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN---DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       166 a~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~---~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ++++++++++.|+.+ ||++|+|+||+++|++.+..+..   .......+..++.+|+|+|+++
T Consensus       167 a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~  230 (255)
T PRK06841        167 GVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAGEKGERAKKLIPAGRFAYPEEIAAAA  230 (255)
T ss_pred             HHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccchhHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            999999999999988 99999999999999987654322   1123344566789999999864

>PRK08226 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.9e-37  Score=248.24  Aligned_cols=214  Identities=30%  Similarity=0.458  Sum_probs=181.5

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      +++|+++||||++|||++++++|+++|++|++++|+++ .....+++...+.++.++.+|++++++++.+++++.+.+++
T Consensus         4 ~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   82 (263)
T PRK08226          4 LTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGR   82 (263)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            56899999999999999999999999999999999874 44455555555667888999999999999999999999999


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCC-cCCCCCCchhhHhHHH
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAG-YQPQSSMAMYGVTKTA  166 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~-~~~~~~~~~Y~~sKaa  166 (226)
                      +|++|||||... ..++.+.+.++|++++++|+.+++.+.++++|++++  .++||++||..+ ..+.++...|+++|++
T Consensus        83 id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~~sK~a  161 (263)
T PRK08226         83 IDILVNNAGVCR-LGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAA  161 (263)
T ss_pred             CCEEEECCCcCC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCCCCcchHHHHHHH
Confidence            999999999865 567778889999999999999999999999998853  478999999877 3566788899999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCceeCCccccccc------Cc----hhhhhhccCCCCCchhhhccc
Q 027248          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS------ND----GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       167 ~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~------~~----~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +++++++++.|+.+ +|+|++|+||+++|++.+....      ..    .+....+..++.+|+|+|+++
T Consensus       162 ~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~  231 (263)
T PRK08226        162 IVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPLEVGELA  231 (263)
T ss_pred             HHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCCCCCCCHHHHHHHH
Confidence            99999999999988 9999999999999998765321      11    111223445678999999864

>PRK12939 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-36  Score=245.71  Aligned_cols=218  Identities=25%  Similarity=0.400  Sum_probs=191.3

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      +.++++|+++||||+++||++++++|+++|++|++++|++++++...+++...+.++.++.+|++++++++++++++.+.
T Consensus         2 ~~~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   81 (250)
T PRK12939          2 ASNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAA   81 (250)
T ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            34567899999999999999999999999999999999998888888777766677889999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhH
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTK  164 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sK  164 (226)
                      ++++|++|||+|... ..++.+.+.++|++++++|+.+++++.+++.|.+.+  .+++|++||..+..+.++...|+++|
T Consensus        82 ~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK  160 (250)
T PRK12939         82 LGGLDGLVNNAGITN-SKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPKLGAYVASK  160 (250)
T ss_pred             cCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCCcchHHHHH
Confidence            999999999999876 466778889999999999999999999999999855  57999999999988888899999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC---chhhhhhccCCCCCchhhhccc
Q 027248          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN---DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       165 aa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~---~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ++++++++.++.++.+ +|++++|+||+++|++.......   ..+....+..++.+|+|+|+++
T Consensus       161 ~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  225 (250)
T PRK12939        161 GAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPADERHAYYLKGRALERLQVPDDVAGAV  225 (250)
T ss_pred             HHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCChHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence            9999999999999987 99999999999999987654321   1123344556789999998864

>PRK12937 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-36  Score=243.80  Aligned_cols=216  Identities=31%  Similarity=0.440  Sum_probs=185.8

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcc-hHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK-NVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      ++++|+++||||++|||++++++|+++|++|+++.|+.+ ..+...+++.+.+.++.++.+|++++++++++++++.+.+
T Consensus         2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (245)
T PRK12937          2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAF   81 (245)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            467899999999999999999999999999988877654 4455666666667788999999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHhHHHH
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~  167 (226)
                      +++|++|||||... ..++.+.+.++|++++++|+.+++.++++++|.|++.++||++||..+..+.++...|+++|+++
T Consensus        82 ~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~  160 (245)
T PRK12937         82 GRIDVLVNNAGVMP-LGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALPLPGYGPYAASKAAV  160 (245)
T ss_pred             CCCCEEEECCCCCC-CCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCCCCCCchhHHHHHHH
Confidence            99999999999865 46677888999999999999999999999999998778999999999888889999999999999


Q ss_pred             HHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCc---hhhhhhccCCCCCchhhhccc
Q 027248          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND---GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       168 ~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +.|++.++.|+.+ +|++++++||+++|++........   .+.+..+..+..+|+|+|.++
T Consensus       161 ~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~  222 (245)
T PRK12937        161 EGLVHVLANELRGRGITVNAVAPGPVATELFFNGKSAEQIDQLAGLAPLERLGTPEEIAAAV  222 (245)
T ss_pred             HHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCCHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence            9999999999988 999999999999999853322111   122344555677899998764

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=100.00  E-value=1.5e-36  Score=244.61  Aligned_cols=215  Identities=24%  Similarity=0.353  Sum_probs=182.9

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEE-ecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      +++|+++||||++|||++++++|+++|++|++. +++.+..+...+++...+.++..+.+|+++.++++++++++.+.++
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVG   80 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            368999999999999999999999999998874 4555555556666666666788889999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcC--CEEEEEeccCCcCCCCCCchhhHhHHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKG--SSVVLISSIAGYQPQSSMAMYGVTKTA  166 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~--~~iv~~sS~~~~~~~~~~~~Y~~sKaa  166 (226)
                      ++|+||||||... ..++.+.+.++|++++++|+.+++.+++++.|.|++.  ++||++||..+..+.++...|+++|++
T Consensus        81 ~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sK~a  159 (246)
T PRK12938         81 EIDVLVNNAGITR-DVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAG  159 (246)
T ss_pred             CCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCCCChhHHHHHHH
Confidence            9999999999865 4577888999999999999999999999999988543  699999999988888999999999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC--chhhhhhccCCCCCchhhhccc
Q 027248          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN--DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       167 ~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +++++++++.|+.+ +|++++|+||+++|++.+...+.  .......+..++.+|+++++++
T Consensus       160 ~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  221 (246)
T PRK12938        160 IHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATIPVRRLGSPDEIGSIV  221 (246)
T ss_pred             HHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhcChHHHHHHHhcCCccCCcCHHHHHHHH
Confidence            99999999999988 99999999999999987654221  1122233456688999988764

>PRK06182 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.2e-36  Score=249.00  Aligned_cols=208  Identities=29%  Similarity=0.389  Sum_probs=177.3

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      ++|+++||||++|||++++++|+++|++|++++|++++++...    ..  .+.++.+|++++++++.+++++.+.++++
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~----~~--~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i   75 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA----SL--GVHPLSLDVTDEASIKAAVDTIIAEEGRI   75 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----hC--CCeEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            4799999999999999999999999999999999987665432    22  36788999999999999999999999999


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHHHH
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALL  168 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~  168 (226)
                      |+||||||... ..++.+.+.++|++++++|+.+++.+++.++|.|++  .++||++||..+..+.++...|++||++++
T Consensus        76 d~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~  154 (273)
T PRK06182         76 DVLVNNAGYGS-YGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTPLGAWYHATKFALE  154 (273)
T ss_pred             CEEEECCCcCC-CCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCCCccHhHHHHHHHH
Confidence            99999999875 567888899999999999999999999999999965  379999999988888888889999999999


Q ss_pred             HHHHHHHHHhCC-CeEEEEEecCceeCCccccccc-------Cc-----------hhhhhhccCCCCCchhhhccc
Q 027248          169 GLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS-------ND-----------GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       169 ~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~-------~~-----------~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +|+++++.|+.+ ||++++|+||+++|++......       ..           .+.......++.+|+++|+++
T Consensus       155 ~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i  230 (273)
T PRK06182        155 GFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTYGSGRLSDPSVIADAI  230 (273)
T ss_pred             HHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHhhccccCCCHHHHHHHH
Confidence            999999999988 9999999999999997532110       00           011112345678999999875

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.7e-36  Score=244.63  Aligned_cols=214  Identities=32%  Similarity=0.465  Sum_probs=185.8

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEE-EecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVV-SSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      +||+++||||++|||++++++|+++|++|++ ..|+.++.+...+++...+.++.++.+|++++++++.+++++.+.+++
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGR   82 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            5799999999999999999999999999776 578887777777777776778889999999999999999999999999


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHHH
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~  167 (226)
                      +|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|.|++  .++||++||..+..+.++...|++||+++
T Consensus        83 id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~a~  161 (250)
T PRK08063         83 LDVFVNNAASGV-LRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLENYTTVGVSKAAL  161 (250)
T ss_pred             CCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCccHHHHHHHHH
Confidence            999999999765 567788899999999999999999999999999854  47999999998888888899999999999


Q ss_pred             HHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchhh----hhhccCCCCCchhhhccc
Q 027248          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVV----SSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       168 ~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~----~~~~~~~~~~p~~~a~av  225 (226)
                      ++|+++++.|+.+ +|++++|+||+++|++...........    ...+..+..+|+|+|+++
T Consensus       162 ~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  224 (250)
T PRK08063        162 EALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELLEDARAKTPAGRMVEPEDVANAV  224 (250)
T ss_pred             HHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchHHHHHHhcCCCCCCCcCHHHHHHHH
Confidence            9999999999987 999999999999999876543332222    222345678999998764

>TIGR02415 23BDH acetoin reductases

Probab=100.00  E-value=1.7e-36  Score=245.16  Aligned_cols=212  Identities=35%  Similarity=0.510  Sum_probs=187.4

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCE
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~   92 (226)
                      |+++||||+++||++++++|+++|++|++++|+++.++...+++...+.++..+.+|++++++++++++.+.+.++++|+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   80 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV   80 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            68999999999999999999999999999999988888887777777777889999999999999999999999999999


Q ss_pred             EEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc---CCEEEEEeccCCcCCCCCCchhhHhHHHHHH
Q 027248           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALLG  169 (226)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~---~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~  169 (226)
                      ||||+|... ..++.+.+.++|++++++|+.+++.+++.+++.|++   +++||++||..+..+.++.+.|++||+++++
T Consensus        81 vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  159 (254)
T TIGR02415        81 MVNNAGVAP-ITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVRG  159 (254)
T ss_pred             EEECCCcCC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCCCcchHHHHHHHHH
Confidence            999999865 567788899999999999999999999999998854   3699999999998888999999999999999


Q ss_pred             HHHHHHHHhCC-CeEEEEEecCceeCCcccccccC-------------chhhhhhccCCCCCchhhhccc
Q 027248          170 LTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN-------------DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       170 ~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~-------------~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      |++.++.|+.+ +|+|++++||+++|++.+.....             ..+....+..++.+|+++++++
T Consensus       160 ~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~  229 (254)
T TIGR02415       160 LTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDVAGLV  229 (254)
T ss_pred             HHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhhCCCCCCCCHHHHHHHH
Confidence            99999999988 99999999999999987654321             1122344556789999999865

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK05650 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-36  Score=247.41  Aligned_cols=212  Identities=22%  Similarity=0.304  Sum_probs=187.0

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCE
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~   92 (226)
                      |+++||||+||||++++++|+++|++|++++|+.++++...+++...+.++.++.+|++++++++.+++.+.+.++++|+
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~   80 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV   80 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            47999999999999999999999999999999999888888888777778889999999999999999999999999999


Q ss_pred             EEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHHHHHH
Q 027248           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLGL  170 (226)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~  170 (226)
                      ||||||... ...+.+.+.++|++++++|+.+++.+++.++|.|++  .++||++||..+..+.++.+.|+++|++++++
T Consensus        81 lI~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~~  159 (270)
T PRK05650         81 IVNNAGVAS-GGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVAL  159 (270)
T ss_pred             EEECCCCCC-CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCCCchHHHHHHHHHHHH
Confidence            999999875 567788899999999999999999999999999854  37999999999999999999999999999999


Q ss_pred             HHHHHHHhCC-CeEEEEEecCceeCCcccccccCch----hhhhhccCCCCCchhhhccc
Q 027248          171 TKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG----VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       171 ~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~----~~~~~~~~~~~~p~~~a~av  225 (226)
                      +++|+.|+.+ ||++++|+||+++|++.........    ...........+|+++|+++
T Consensus       160 ~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i  219 (270)
T PRK05650        160 SETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGKLLEKSPITAADIADYI  219 (270)
T ss_pred             HHHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHHHHHhhcCCCCHHHHHHHH
Confidence            9999999988 9999999999999998776543322    11222334567899998764

>PRK06949 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-36  Score=245.26  Aligned_cols=217  Identities=25%  Similarity=0.427  Sum_probs=190.8

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      .+++||+++||||++|||++++++|+++|++|++++|++++++....++...+.++.++.+|++++++++++++++.+.+
T Consensus         5 ~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (258)
T PRK06949          5 INLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEA   84 (258)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence            35789999999999999999999999999999999999988888877776666678899999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc----------CCEEEEEeccCCcCCCCCC
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK----------GSSVVLISSIAGYQPQSSM  157 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~----------~~~iv~~sS~~~~~~~~~~  157 (226)
                      +++|++|||+|... ..++.+.+.++|+.++++|+.+++.+++++.|.|.+          .+++|++||..+..+.+..
T Consensus        85 ~~~d~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~  163 (258)
T PRK06949         85 GTIDILVNNSGVST-TQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQI  163 (258)
T ss_pred             CCCCEEEECCCCCC-CCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCCCc
Confidence            99999999999865 466777888999999999999999999999998742          3689999999998888889


Q ss_pred             chhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCc---hhhhhhccCCCCCchhhhccc
Q 027248          158 AMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND---GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       158 ~~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ..|+++|++++.+++.++.|+.+ +|+|++|+||+++|++....+...   .....++..+...|+|+|.++
T Consensus       164 ~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  235 (258)
T PRK06949        164 GLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWETEQGQKLVSMLPRKRVGKPEDLDGLL  235 (258)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccChHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            99999999999999999999988 999999999999999876543321   234455667899999998764

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.9e-38  Score=233.44  Aligned_cols=212  Identities=28%  Similarity=0.334  Sum_probs=184.2

Q ss_pred             cccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus         6 ~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      |.-++.|+++++||+..|||++++++|++.|++|+.+.|+++.++++.++.   ...+..+..|+++.+.+.+.+..   
T Consensus         1 M~t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~---p~~I~Pi~~Dls~wea~~~~l~~---   74 (245)
T KOG1207|consen    1 MKTSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKET---PSLIIPIVGDLSAWEALFKLLVP---   74 (245)
T ss_pred             CcccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhC---CcceeeeEecccHHHHHHHhhcc---
Confidence            445789999999999999999999999999999999999999998887765   33478899999998876665553   


Q ss_pred             HhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhh---hcCCEEEEEeccCCcCCCCCCchhhH
Q 027248           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHL---QKGSSVVLISSIAGYQPQSSMAMYGV  162 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l---~~~~~iv~~sS~~~~~~~~~~~~Y~~  162 (226)
                       .+.+|.||||||+.. ..++.+++.++|++.+++|+.+.+.+.|.....+   +.+|.||++||.++..+..+.+.||+
T Consensus        75 -v~pidgLVNNAgvA~-~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~nHtvYca  152 (245)
T KOG1207|consen   75 -VFPIDGLVNNAGVAT-NHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDNHTVYCA  152 (245)
T ss_pred             -cCchhhhhccchhhh-cchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCCceEEee
Confidence             468999999999986 7899999999999999999999999999966654   23577999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchh----hhhhccCCCCCchhhhccc
Q 027248          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGV----VSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       163 sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~----~~~~~~~~~~~p~~~a~av  225 (226)
                      +|+|+++++|+|+.|+++ .||||+|.|-++-|+|.+..|+++.-    ..+++..++...++|.+|+
T Consensus       153 tKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~riPl~rFaEV~eVVnA~  220 (245)
T KOG1207|consen  153 TKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDRIPLKRFAEVDEVVNAV  220 (245)
T ss_pred             cHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchhccchhhhCchhhhhHHHHHHhhh
Confidence            999999999999999999 99999999999999999998877553    3455666677777766654

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.5e-36  Score=243.60  Aligned_cols=216  Identities=35%  Similarity=0.581  Sum_probs=188.5

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      ++++|+++||||+++||++++++|+++|++|++++|++++.+.....+.. +.++.++.+|++++++++.+++++.++++
T Consensus         2 ~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (251)
T PRK07231          2 RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA-GGRAIAVAADVSDEADVEAAVAAALERFG   80 (251)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            36789999999999999999999999999999999999887777666654 55688999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa  166 (226)
                      ++|++|||+|......++.+.+.++|++++++|+.+++.+++.+.+.+++  .++||++||..+..+.++...|+.+|++
T Consensus        81 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk~~  160 (251)
T PRK07231         81 SVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPGLGWYNASKGA  160 (251)
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCCchHHHHHHHH
Confidence            99999999998654566778899999999999999999999999999854  4789999999999899999999999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC------chhhhhhccCCCCCchhhhccc
Q 027248          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN------DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       167 ~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~------~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ++.+++.++.++.+ +|++++++||+++|++.......      ..+....+..++..|+|+|.++
T Consensus       161 ~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  226 (251)
T PRK07231        161 VITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATIPLGRLGTPEDIANAA  226 (251)
T ss_pred             HHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcCCCCCCCcCHHHHHHHH
Confidence            99999999999988 99999999999999987765431      1123334456678999998764

>PRK06194 hypothetical protein; Provisional

Probab=100.00  E-value=2.8e-36  Score=248.32  Aligned_cols=191  Identities=27%  Similarity=0.436  Sum_probs=173.7

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.++...+++...+.++.++.+|+++.++++++++.+.+.++
T Consensus         3 ~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g   82 (287)
T PRK06194          3 DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFG   82 (287)
T ss_pred             CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            35689999999999999999999999999999999998888888877776666788899999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcC--------CEEEEEeccCCcCCCCCCchh
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKG--------SSVVLISSIAGYQPQSSMAMY  160 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~--------~~iv~~sS~~~~~~~~~~~~Y  160 (226)
                      ++|+||||||... ..++.+.+.++|++++++|+.|+++++++++|.|.+.        ++||++||.++..+.++.+.|
T Consensus        83 ~id~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y  161 (287)
T PRK06194         83 AVHLLFNNAGVGA-GGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGIY  161 (287)
T ss_pred             CCCEEEECCCCCC-CCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCcch
Confidence            9999999999876 4667788899999999999999999999999988532        689999999999888999999


Q ss_pred             hHhHHHHHHHHHHHHHHhCC---CeEEEEEecCceeCCccccc
Q 027248          161 GVTKTALLGLTKALAAEMAP---DTRVNCVAPGFVPTHFAEYI  200 (226)
Q Consensus       161 ~~sKaa~~~~~~~la~e~~~---~i~v~~v~Pg~v~t~~~~~~  200 (226)
                      ++||+++++|+++++.|+..   +|+++.++||+++|++.+..
T Consensus       162 ~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~~  204 (287)
T PRK06194        162 NVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQSE  204 (287)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCcccccc
Confidence            99999999999999999863   79999999999999987654

>PRK07024 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-36  Score=245.50  Aligned_cols=204  Identities=20%  Similarity=0.265  Sum_probs=174.9

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id   91 (226)
                      +|+++||||++|||++++++|+++|++|++++|+.++++...+++...+ ++.++.+|++++++++++++++.++++.+|
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id   80 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAA-RVSVYAADVRDADALAAAAADFIAAHGLPD   80 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCC-eeEEEEcCCCCHHHHHHHHHHHHHhCCCCC
Confidence            4789999999999999999999999999999999888777666664433 788999999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHHHHH
Q 027248           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLG  169 (226)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~  169 (226)
                      ++|||||.........+.+.++|++++++|+.|++.+++.++|.|++  .++||++||..+..+.++...|++||+++++
T Consensus        81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~  160 (257)
T PRK07024         81 VVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLPGAGAYSASKAAAIK  160 (257)
T ss_pred             EEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCCcchHHHHHHHHH
Confidence            99999998652223334788999999999999999999999999854  4799999999999999999999999999999


Q ss_pred             HHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhcc
Q 027248          170 LTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLA  224 (226)
Q Consensus       170 ~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~a  224 (226)
                      ++++++.|+.+ ||++++++||+++|++.....    +    ......+|+++|..
T Consensus       161 ~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~----~----~~~~~~~~~~~a~~  208 (257)
T PRK07024        161 YLESLRVELRPAGVRVVTIAPGYIRTPMTAHNP----Y----PMPFLMDADRFAAR  208 (257)
T ss_pred             HHHHHHHHhhccCcEEEEEecCCCcCchhhcCC----C----CCCCccCHHHHHHH
Confidence            99999999988 999999999999999764321    0    11224577777754

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.6e-36  Score=268.99  Aligned_cols=213  Identities=29%  Similarity=0.422  Sum_probs=184.7

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      .+||+++||||++|||++++++|+++|++|++++|+.++++...+++   +.++.++.+|++++++++.+++++.+++++
T Consensus         3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (520)
T PRK06484          3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL---GPDHHALAMDVSDEAQIREGFEQLHREFGR   79 (520)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceeEEEeccCCHHHHHHHHHHHHHHhCC
Confidence            46899999999999999999999999999999999988877666555   456778999999999999999999999999


Q ss_pred             CCEEEEcCCCCC-CCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--C-CEEEEEeccCCcCCCCCCchhhHhHH
Q 027248           90 IDVVVSNAAANP-SVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--G-SSVVLISSIAGYQPQSSMAMYGVTKT  165 (226)
Q Consensus        90 id~li~nag~~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~-~~iv~~sS~~~~~~~~~~~~Y~~sKa  165 (226)
                      +|+||||||+.. ...++.+.+.++|++++++|+.+++.++++++|+|++  . ++||++||..+..+.++...|+++|+
T Consensus        80 iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~~~~Y~asKa  159 (520)
T PRK06484         80 IDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKA  159 (520)
T ss_pred             CCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCCCchHHHHHH
Confidence            999999999843 2356778899999999999999999999999999943  3 49999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCc-----hhhhhhccCCCCCchhhhccc
Q 027248          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND-----GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       166 a~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~-----~~~~~~~~~~~~~p~~~a~av  225 (226)
                      |+++|+++|+.|+.+ +|+|++|+||+++|++........     .....++..++.+|+++|+++
T Consensus       160 al~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~v  225 (520)
T PRK06484        160 AVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRIPLGRLGRPEEIAEAV  225 (520)
T ss_pred             HHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhcCCCCCCcCHHHHHHHH
Confidence            999999999999988 999999999999999876543321     122334555678999998764

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-36  Score=245.84  Aligned_cols=208  Identities=30%  Similarity=0.385  Sum_probs=176.0

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      ++++|+++||||++|||++++++|+++|++|++++|++++.+         ..++..+.+|++++++++++++++.+.++
T Consensus         6 ~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~---------~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   76 (266)
T PRK06171          6 NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ---------HENYQFVPTDVSSAEEVNHTVAEIIEKFG   76 (266)
T ss_pred             cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc---------cCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            467999999999999999999999999999999999876542         23577889999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCC--------CccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCc
Q 027248           89 KIDVVVSNAAANPSV--------DSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMA  158 (226)
Q Consensus        89 ~id~li~nag~~~~~--------~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~  158 (226)
                      ++|++|||||.....        .++.+.+.++|++++++|+.+++.+++++.|+|++  .++||++||..+..+.++..
T Consensus        77 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  156 (266)
T PRK06171         77 RIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEGQS  156 (266)
T ss_pred             CCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCCc
Confidence            999999999975421        12346789999999999999999999999999854  47999999999988889999


Q ss_pred             hhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCcee-CCccccccc----------Cc----hhhh--hhccCCCCCchh
Q 027248          159 MYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVP-THFAEYITS----------ND----GVVS--SVSSLKLSPPSS  220 (226)
Q Consensus       159 ~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~-t~~~~~~~~----------~~----~~~~--~~~~~~~~~p~~  220 (226)
                      .|++||+++++|+++++.|+.+ ||+||+|+||+++ |++......          ..    .+..  ..+..++..|+|
T Consensus       157 ~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~e  236 (266)
T PRK06171        157 CYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIPLGRSGKLSE  236 (266)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhcccccccCCCCCCHHH
Confidence            9999999999999999999988 9999999999997 666432110          01    1112  455678899999


Q ss_pred             hhccc
Q 027248          221 LTLAV  225 (226)
Q Consensus       221 ~a~av  225 (226)
                      +|.++
T Consensus       237 va~~~  241 (266)
T PRK06171        237 VADLV  241 (266)
T ss_pred             hhhhe
Confidence            99876

>PRK05993 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-36  Score=248.75  Aligned_cols=181  Identities=23%  Similarity=0.315  Sum_probs=163.8

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh-CCC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF-GKI   90 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-~~i   90 (226)
                      +|+++||||++|||++++++|+++|++|++++|+++.++.+.    +.  .+.++.+|++++++++.+++++.+.+ +++
T Consensus         4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~----~~--~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~i   77 (277)
T PRK05993          4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALE----AE--GLEAFQLDYAEPESIAALVAQVLELSGGRL   77 (277)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH----HC--CceEEEccCCCHHHHHHHHHHHHHHcCCCc
Confidence            589999999999999999999999999999999987765443    22  36678999999999999999998776 689


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHHHH
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALL  168 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~  168 (226)
                      |+||||||... ..++.+.+.++|++++++|+.|++.+++.++|.|++  .++||++||..+..+.++.+.|++||++++
T Consensus        78 d~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~  156 (277)
T PRK05993         78 DALFNNGAYGQ-PGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKYRGAYNASKFAIE  156 (277)
T ss_pred             cEEEECCCcCC-CCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCCCccchHHHHHHHHH
Confidence            99999999875 567788899999999999999999999999999965  479999999999989999999999999999


Q ss_pred             HHHHHHHHHhCC-CeEEEEEecCceeCCcccc
Q 027248          169 GLTKALAAEMAP-DTRVNCVAPGFVPTHFAEY  199 (226)
Q Consensus       169 ~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~  199 (226)
                      +|+++|+.|+.+ ||+|++|+||+++|++.+.
T Consensus       157 ~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~  188 (277)
T PRK05993        157 GLSLTLRMELQGSGIHVSLIEPGPIETRFRAN  188 (277)
T ss_pred             HHHHHHHHHhhhhCCEEEEEecCCccCchhhH
Confidence            999999999988 9999999999999998764

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=4.2e-36  Score=243.54  Aligned_cols=215  Identities=22%  Similarity=0.321  Sum_probs=180.6

Q ss_pred             ccCCCEEEEEcCC--CchhHHHHHHHHhCCCeEEEEecCc-----------chHHHHHHHHHhcCCcEEEEEeeCCCHHH
Q 027248            9 RFQGKVAIVTAST--QGIGFGIAERLGLEGASVVVSSRKQ-----------KNVDEAVVKLKARGIEVIGVVCHVSNGQQ   75 (226)
Q Consensus         9 ~~~gk~vlItGa~--~giG~a~~~~l~~~g~~v~~~~r~~-----------~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   75 (226)
                      .+++|+++||||+  +|||.+++++|+++|++|++++|++           ........++...+.++..+.+|++++++
T Consensus         2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   81 (256)
T PRK12748          2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYA   81 (256)
T ss_pred             CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence            3578999999999  4999999999999999999999982           22222444555556678899999999999


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCC
Q 027248           76 RKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQP  153 (226)
Q Consensus        76 v~~~~~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~  153 (226)
                      ++.+++++.+.++++|+||||||+.. ..++.+.+.+++++.+++|+.+++.+.+++.+.|++  .++||++||..+..+
T Consensus        82 ~~~~~~~~~~~~g~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~  160 (256)
T PRK12748         82 PNRVFYAVSERLGDPSILINNAAYST-HTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGP  160 (256)
T ss_pred             HHHHHHHHHHhCCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCC
Confidence            99999999999999999999999865 567788889999999999999999999999998854  479999999998888


Q ss_pred             CCCCchhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          154 QSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       154 ~~~~~~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      .++...|++||+++++++++++.|+.+ +|+|++++||+++|++...... ..+.......++.+|+++|+++
T Consensus       161 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~~~~-~~~~~~~~~~~~~~~~~~a~~~  232 (256)
T PRK12748        161 MPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITEELK-HHLVPKFPQGRVGEPVDAARLI  232 (256)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCChhHH-HhhhccCCCCCCcCHHHHHHHH
Confidence            888999999999999999999999987 9999999999999997543211 1122333445678899988764

>PRK05854 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-36  Score=252.09  Aligned_cols=190  Identities=24%  Similarity=0.276  Sum_probs=166.7

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      .+++||+++||||++|||++++++|+++|++|++++|+.++.++..+++.+.  +.++.++.+|+++.++++++++++.+
T Consensus        10 ~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~   89 (313)
T PRK05854         10 PDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRA   89 (313)
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999999888888877654  33678899999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc-CCEEEEEeccCCcCC-----------
Q 027248           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-GSSVVLISSIAGYQP-----------  153 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~-~~~iv~~sS~~~~~~-----------  153 (226)
                      .++++|+||||||+..  .+..+.+.++|+.++++|+.|++.+++.++|.|++ .++||++||.++..+           
T Consensus        90 ~~~~iD~li~nAG~~~--~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~~~~~~~~  167 (313)
T PRK05854         90 EGRPIHLLINNAGVMT--PPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINWDDLNWER  167 (313)
T ss_pred             hCCCccEEEECCcccc--CCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCcccccccc
Confidence            9999999999999864  23345678899999999999999999999999965 479999999976542           


Q ss_pred             -CCCCchhhHhHHHHHHHHHHHHHHh--CC-CeEEEEEecCceeCCcccc
Q 027248          154 -QSSMAMYGVTKTALLGLTKALAAEM--AP-DTRVNCVAPGFVPTHFAEY  199 (226)
Q Consensus       154 -~~~~~~Y~~sKaa~~~~~~~la~e~--~~-~i~v~~v~Pg~v~t~~~~~  199 (226)
                       .++...|+.||+|+.+|++.|+.++  .. ||+||+++||+++|++...
T Consensus       168 ~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~~  217 (313)
T PRK05854        168 SYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLAA  217 (313)
T ss_pred             cCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCcccc
Confidence             2456789999999999999999865  34 8999999999999998754

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=100.00  E-value=5.4e-36  Score=242.01  Aligned_cols=209  Identities=25%  Similarity=0.376  Sum_probs=181.1

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      .+++++|+++||||+++||++++++|+++|++|++++|+.         ....+.++.++.+|++++++++++++++.++
T Consensus         3 ~~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   73 (252)
T PRK08220          3 AMDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LTQEDYPFATFVLDVSDAAAVAQVCQRLLAE   73 (252)
T ss_pred             ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hhhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            3568899999999999999999999999999999999976         1223456888999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhH
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTK  164 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sK  164 (226)
                      ++++|++|||+|... ..++.+.+.++|++++++|+.+++.+++++.|.|++  .++||++||..+..+.++.+.|++||
T Consensus        74 ~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK  152 (252)
T PRK08220         74 TGPLDVLVNAAGILR-MGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIGMAAYGASK  152 (252)
T ss_pred             cCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCCCchhHHHH
Confidence            999999999999865 467788889999999999999999999999999854  47999999999888888899999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCc------------hhhhhhccCCCCCchhhhccc
Q 027248          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND------------GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       165 aa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~------------~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +++++|++.++.|+.+ ||+|+++.||+++|++........            .+....+..++..|+|+|+++
T Consensus       153 ~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  226 (252)
T PRK08220        153 AALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQEIANAV  226 (252)
T ss_pred             HHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcCCCcccCCHHHHHHHH
Confidence            9999999999999988 999999999999999865543211            122233456789999999875

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=6.4e-36  Score=241.60  Aligned_cols=213  Identities=27%  Similarity=0.371  Sum_probs=175.8

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecC-cchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRK-QKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      +++|+++||||++|||+++++.|+++|++|+++.++ ++..+....++   +.++.++++|++++++++++++++.+.++
T Consensus         3 l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   79 (253)
T PRK08642          3 ISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL---GDRAIALQADVTDREQVQAMFATATEHFG   79 (253)
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            468999999999999999999999999999887654 44444443333   34678899999999999999999999888


Q ss_pred             C-CCEEEEcCCCCC-----CCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchh
Q 027248           89 K-IDVVVSNAAANP-----SVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMY  160 (226)
Q Consensus        89 ~-id~li~nag~~~-----~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y  160 (226)
                      . +|++|||||...     ...++.+.+.++|++++++|+.+++.++++++|.|.+  .++||++||..+..+.++...|
T Consensus        80 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y  159 (253)
T PRK08642         80 KPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNPVVPYHDY  159 (253)
T ss_pred             CCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCccch
Confidence            7 999999998742     1245778899999999999999999999999998853  4799999998877777778899


Q ss_pred             hHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch---hhhhhccCCCCCchhhhccc
Q 027248          161 GVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG---VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       161 ~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~---~~~~~~~~~~~~p~~~a~av  225 (226)
                      ++||+|+++|++.++.|+.+ ||+||+|+||+++|+.......+..   +....+..++.+|+|+|+++
T Consensus       160 ~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~  228 (253)
T PRK08642        160 TTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATPDEVFDLIAATTPLRKVTTPQEFADAV  228 (253)
T ss_pred             HHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCCHHHHHHHHhcCCcCCCCCHHHHHHHH
Confidence            99999999999999999988 9999999999999986543322211   22334556789999998864

>PRK07832 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.4e-36  Score=244.22  Aligned_cols=212  Identities=22%  Similarity=0.293  Sum_probs=181.6

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCc-EEEEEeeCCCHHHHHHHHHHHHHHhCCCC
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIE-VIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~Dv~~~~~v~~~~~~~~~~~~~id   91 (226)
                      |+++||||++|||++++++|+++|++|++++|+++.++...+++...+.+ ..++.+|++++++++.+++++.+.++++|
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD   80 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            57999999999999999999999999999999988888877777655544 45578999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc---CCEEEEEeccCCcCCCCCCchhhHhHHHHH
Q 027248           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALL  168 (226)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~---~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~  168 (226)
                      +||||+|... ..++.+.+.++|++.+++|+.++++++++++|.|.+   .++||++||..+..+.++...|++||+++.
T Consensus        81 ~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~  159 (272)
T PRK07832         81 VVMNIAGISA-WGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGLR  159 (272)
T ss_pred             EEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCCCCcchHHHHHHHH
Confidence            9999999865 567788999999999999999999999999999843   479999999998888889999999999999


Q ss_pred             HHHHHHHHHhCC-CeEEEEEecCceeCCccccccc------Cchhhh--hhccCCCCCchhhhccc
Q 027248          169 GLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS------NDGVVS--SVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       169 ~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~------~~~~~~--~~~~~~~~~p~~~a~av  225 (226)
                      +|+++++.|+.+ +|+|++|+||+++|++.+....      +.....  .....+..+|+++|.++
T Consensus       160 ~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~~  225 (272)
T PRK07832        160 GLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVDRFRGHAVTPEKAAEKI  225 (272)
T ss_pred             HHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHHhcccCCCCHHHHHHHH
Confidence            999999999988 9999999999999998765421      111111  11234578999999764

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=9.6e-36  Score=241.74  Aligned_cols=217  Identities=32%  Similarity=0.499  Sum_probs=184.9

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      .+++||+++||||+++||.+++++|+++|++|++++|+.++++...+++...+.++.++.+|++++++++++++++.+.+
T Consensus         8 ~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~   87 (259)
T PRK08213          8 FDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERF   87 (259)
T ss_pred             hCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            35789999999999999999999999999999999999888887777777666778889999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhh-hhc--CCEEEEEeccCCcCCCCC----Cchh
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPH-LQK--GSSVVLISSIAGYQPQSS----MAMY  160 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~-l~~--~~~iv~~sS~~~~~~~~~----~~~Y  160 (226)
                      +++|++|||||... ..+..+.+.++|++++++|+.+++++.+++.++ +.+  .+++|++||..+..+.++    ...|
T Consensus        88 ~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~~~~~~~Y  166 (259)
T PRK08213         88 GHVDILVNNAGATW-GAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAY  166 (259)
T ss_pred             CCCCEEEECCCCCC-CCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCccccCcchH
Confidence            99999999999865 456777889999999999999999999999997 643  369999999877655443    4889


Q ss_pred             hHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC--chhhhhhccCCCCCchhhhccc
Q 027248          161 GVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN--DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       161 ~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +++|++++++++.++.++.+ ||+++.++||+++|++.....+.  .......+..++.+|+++|.++
T Consensus       167 ~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~  234 (259)
T PRK08213        167 NTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTLERLGEDLLAHTPLGRLGDDEDLKGAA  234 (259)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhhHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            99999999999999999988 99999999999999986654332  1123334455677899998653

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=100.00  E-value=8.3e-36  Score=240.54  Aligned_cols=215  Identities=24%  Similarity=0.383  Sum_probs=189.6

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      +++|+++||||+++||++++++|+++|++|++++|+.+..+...+++.+.+.++.++.+|+++.++++++++.+.+.+++
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   80 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGP   80 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999999999999998888877777766677889999999999999999999999999


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHHH
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~  167 (226)
                      +|++|||+|... ..++.+.+.++|++++++|+.+++++.+++.+.|++  .++||++||..+..+.++...|+.+|+++
T Consensus        81 ~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~~~~Y~~sK~a~  159 (250)
T TIGR03206        81 VDVLVNNAGWDK-FGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAACKGGL  159 (250)
T ss_pred             CCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCCCchHHHHHHHH
Confidence            999999999864 567778889999999999999999999999999854  46899999999988889999999999999


Q ss_pred             HHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC--------chhhhhhccCCCCCchhhhccc
Q 027248          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN--------DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       168 ~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~--------~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +.++++++.|+.+ +|+++.++||+++|++.......        ..+....+.+++.+|+|+|+++
T Consensus       160 ~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  226 (250)
T TIGR03206       160 VAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPLGRLGQPDDLPGAI  226 (250)
T ss_pred             HHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCccCCcCHHHHHHHH
Confidence            9999999999987 99999999999999987654321        1233445566788999999865

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK07454 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.2e-36  Score=239.62  Aligned_cols=210  Identities=23%  Similarity=0.303  Sum_probs=184.4

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      ++|+++||||+++||++++++|+++|++|++++|++++.+...+++.+.+.++.++.+|+++++++..+++++.++++++
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP   84 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999999999999988877777777666778889999999999999999999999999


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHHHH
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALL  168 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~  168 (226)
                      |+||||||... ..++.+.+.++|++++++|+.+++.+++.++|.|++  .++||++||..+..+.++...|+.+|++++
T Consensus        85 d~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~  163 (241)
T PRK07454         85 DVLINNAGMAY-TGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQWGAYCVSKAALA  163 (241)
T ss_pred             CEEEECCCccC-CCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCCccHHHHHHHHHH
Confidence            99999999865 456778889999999999999999999999999854  479999999998888888999999999999


Q ss_pred             HHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          169 GLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       169 ~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      .+++.++.|+.+ ||++++|.||+++|++.+..    .....+...+..+|+++|+++
T Consensus       164 ~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~----~~~~~~~~~~~~~~~~va~~~  217 (241)
T PRK07454        164 AFTKCLAEEERSHGIRVCTITLGAVNTPLWDTE----TVQADFDRSAMLSPEQVAQTI  217 (241)
T ss_pred             HHHHHHHHHhhhhCCEEEEEecCcccCCccccc----ccccccccccCCCHHHHHHHH
Confidence            999999999988 99999999999999985431    111222334678999999864

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=8.6e-36  Score=240.23  Aligned_cols=215  Identities=27%  Similarity=0.465  Sum_probs=184.5

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEec-CcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSR-KQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      +++|+++||||++|||.+++++|+++|++|+++.+ +++..+...+++.+.+.++.++.+|++++++++++++++.+.++
T Consensus         4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (247)
T PRK12935          4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFG   83 (247)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            57899999999999999999999999999887654 45566666666766667789999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa  166 (226)
                      ++|++|||||... ...+.+.+.+++++++++|+.+++.++++++|.+.+  .+++|++||..+..+.++...|++||++
T Consensus        84 ~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  162 (247)
T PRK12935         84 KVDILVNNAGITR-DRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAAKAG  162 (247)
T ss_pred             CCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCCCCcchHHHHHH
Confidence            9999999999875 456778888999999999999999999999999843  5799999999988888899999999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC--chhhhhhccCCCCCchhhhccc
Q 027248          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN--DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       167 ~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +++++++++.|+.+ +|+++.++||+++|++.......  ...........+..|+|+++++
T Consensus       163 ~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~  224 (247)
T PRK12935        163 MLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEVPEEVRQKIVAKIPKKRFGQADEIAKGV  224 (247)
T ss_pred             HHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhccHHHHHHHHHhCCCCCCcCHHHHHHHH
Confidence            99999999999987 99999999999999986654321  1222334455688999998875

>PRK12746 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-35  Score=240.04  Aligned_cols=215  Identities=27%  Similarity=0.416  Sum_probs=183.9

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEE-ecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh-
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF-   87 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   87 (226)
                      +++|+++||||+||||++++++|+++|++|++. .|+.++.+...+++...+.++.++.+|++++++++++++++.+++ 
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~   83 (254)
T PRK12746          4 LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQ   83 (254)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhc
Confidence            568999999999999999999999999998774 788777777776666555678889999999999999999998877 


Q ss_pred             -----CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhH
Q 027248           88 -----GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGV  162 (226)
Q Consensus        88 -----~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~  162 (226)
                           +++|++|||||... ...+.+.+.+.|++++++|+.+++++++.+++.+.+.+++|++||..+..+.++...|++
T Consensus        84 ~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~Y~~  162 (254)
T PRK12746         84 IRVGTSEIDILVNNAGIGT-QGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGFTGSIAYGL  162 (254)
T ss_pred             cccCCCCccEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCCCCCcchHh
Confidence                 47999999999865 466778889999999999999999999999999877789999999999888899999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchhh----hhhccCCCCCchhhhccc
Q 027248          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVV----SSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       163 sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~----~~~~~~~~~~p~~~a~av  225 (226)
                      ||+++++++++++.|+.+ ++++++++||+++|++.........+.    ......+...|+|+|+++
T Consensus       163 sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  230 (254)
T PRK12746        163 SKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSSVFGRIGQVEDIADAV  230 (254)
T ss_pred             hHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccChhHHHHHHhcCCcCCCCCHHHHHHHH
Confidence            999999999999999987 999999999999999876554332221    122335677889988764

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=100.00  E-value=6.8e-36  Score=239.73  Aligned_cols=210  Identities=24%  Similarity=0.401  Sum_probs=180.4

Q ss_pred             EEEEcCCCchhHHHHHHHHhCCCeEEEEecC-cchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCEE
Q 027248           15 AIVTASTQGIGFGIAERLGLEGASVVVSSRK-QKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVV   93 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g~~v~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~l   93 (226)
                      ++||||++|||++++++|+++|++|++++|+ .++.+...+++.+.+.++.++.+|++++++++.+++++.+.++++|++
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l   80 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV   80 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5899999999999999999999999988876 455666677777667788999999999999999999999999999999


Q ss_pred             EEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHh-hhhh--cCCEEEEEeccCCcCCCCCCchhhHhHHHHHHH
Q 027248           94 VSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAA-PHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTALLGL  170 (226)
Q Consensus        94 i~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~-~~l~--~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~  170 (226)
                      |||+|... ..++.+.+.++|+.++++|+.+++++.++++ |.++  +.++||++||..+..+.++...|+++|++++++
T Consensus        81 i~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~~  159 (239)
T TIGR01831        81 VLNAGITR-DAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIGA  159 (239)
T ss_pred             EECCCCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCCCcchHHHHHHHHHH
Confidence            99999875 4567788899999999999999999999875 5443  357999999999999999999999999999999


Q ss_pred             HHHHHHHhCC-CeEEEEEecCceeCCcccccccC-chhhhhhccCCCCCchhhhccc
Q 027248          171 TKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN-DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       171 ~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +++++.|+.+ ||++++|+||+++|++.+..... .......+..++.+|+|+|+++
T Consensus       160 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~  216 (239)
T TIGR01831       160 TKALAVELAKRKITVNCIAPGLIDTEMLAEVEHDLDEALKTVPMNRMGQPAEVASLA  216 (239)
T ss_pred             HHHHHHHHhHhCeEEEEEEEccCccccchhhhHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence            9999999988 99999999999999998754321 1233344556788999999875

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK12742 oxidoreductase; Provisional

Probab=100.00  E-value=8.6e-36  Score=238.72  Aligned_cols=207  Identities=24%  Similarity=0.387  Sum_probs=168.9

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecC-cchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRK-QKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      .++||+++||||++|||++++++|+++|++|++++|+ ++..++..++.     .+..+.+|+++.+++.++++    .+
T Consensus         3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~-----~~~~~~~D~~~~~~~~~~~~----~~   73 (237)
T PRK12742          3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET-----GATAVQTDSADRDAVIDVVR----KS   73 (237)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh-----CCeEEecCCCCHHHHHHHHH----Hh
Confidence            4678999999999999999999999999999888764 44444333322     24567899999998777664    35


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCc-CCCCCCchhhHhHHH
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY-QPQSSMAMYGVTKTA  166 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~-~~~~~~~~Y~~sKaa  166 (226)
                      +++|++|||||... ..+..+.+.++|++++++|+.+++.+++.+.+.|++.++||++||..+. .+.++...|+++|++
T Consensus        74 ~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~~sKaa  152 (237)
T PRK12742         74 GALDILVVNAGIAV-FGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDRMPVAGMAAYAASKSA  152 (237)
T ss_pred             CCCcEEEECCCCCC-CCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccccCCCCCCcchHHhHHH
Confidence            78999999999865 4566778899999999999999999999999999878899999999874 567889999999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCc-hhhhhhccCCCCCchhhhccc
Q 027248          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND-GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       167 ~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~-~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ++++++.++.|+.+ ||+||+|+||+++|++........ ......+..++.+|+|+|+++
T Consensus       153 ~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~  213 (237)
T PRK12742        153 LQGMARGLARDFGPRGITINVVQPGPIDTDANPANGPMKDMMHSFMAIKRHGRPEEVAGMV  213 (237)
T ss_pred             HHHHHHHHHHHHhhhCeEEEEEecCcccCCccccccHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence            99999999999988 999999999999999865422111 112233446788999999864

>PRK07904 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-35  Score=240.43  Aligned_cols=205  Identities=20%  Similarity=0.230  Sum_probs=172.8

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCC-CeEEEEecCcch-HHHHHHHHHhcCC-cEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEG-ASVVVSSRKQKN-VDEAVVKLKARGI-EVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g-~~v~~~~r~~~~-~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      -.+|+++||||++|||++++++|+++| ++|++++|++++ ++...+++...+. ++.++.+|++++++++++++++.+ 
T Consensus         6 ~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~-   84 (253)
T PRK07904          6 GNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA-   84 (253)
T ss_pred             CCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh-
Confidence            457899999999999999999999995 999999999886 7777777776543 688999999999999999999886 


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhH
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTK  164 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sK  164 (226)
                      ++++|++|||+|.... ......+.++..+++++|+.+++.+++.++|.|++  .++||++||..+..+.++...|++||
T Consensus        85 ~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~~~~~~Y~~sK  163 (253)
T PRK07904         85 GGDVDVAIVAFGLLGD-AEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVRRSNFVYGSTK  163 (253)
T ss_pred             cCCCCEEEEeeecCCc-hhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCCCCCcchHHHH
Confidence            5899999999998642 11112234556688999999999999999999964  47999999999887888888999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       165 aa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +++.+|+++|+.|+.+ +|+|++++||+++|++.......         ....+|+++|+.+
T Consensus       164 aa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~~~~---------~~~~~~~~~A~~i  216 (253)
T PRK07904        164 AGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHAKEA---------PLTVDKEDVAKLA  216 (253)
T ss_pred             HHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccCCCC---------CCCCCHHHHHHHH
Confidence            9999999999999988 99999999999999987653211         2356888888753

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=100.00  E-value=4.8e-36  Score=240.47  Aligned_cols=188  Identities=20%  Similarity=0.283  Sum_probs=174.6

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      +..+|.|+|||+.+|+|+.+|++|.++|++|++.+-+++..+.+..+..  .++...++.||+++++++++.+.+.+..+
T Consensus        26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~--s~rl~t~~LDVT~~esi~~a~~~V~~~l~  103 (322)
T KOG1610|consen   26 SLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK--SPRLRTLQLDVTKPESVKEAAQWVKKHLG  103 (322)
T ss_pred             ccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc--CCcceeEeeccCCHHHHHHHHHHHHHhcc
Confidence            4678999999999999999999999999999999988888888777775  55677789999999999999999988753


Q ss_pred             --CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc-CCEEEEEeccCCcCCCCCCchhhHhHH
Q 027248           89 --KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-GSSVVLISSIAGYQPQSSMAMYGVTKT  165 (226)
Q Consensus        89 --~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~-~~~iv~~sS~~~~~~~~~~~~Y~~sKa  165 (226)
                        .+..||||||+....++.+..+.+++++++++|++|++.++++++|++++ +||||++||..|..+.|..++|++||+
T Consensus       104 ~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR~~~p~~g~Y~~SK~  183 (322)
T KOG1610|consen  104 EDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGRVALPALGPYCVSKF  183 (322)
T ss_pred             cccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccCccCcccccchhhHH
Confidence              59999999998877889999999999999999999999999999999976 699999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCceeCCccc
Q 027248          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAE  198 (226)
Q Consensus       166 a~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~  198 (226)
                      |++.|+.+|++|+.+ ||+|..+.||...|++..
T Consensus       184 aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l~~  217 (322)
T KOG1610|consen  184 AVEAFSDSLRRELRPFGVKVSIIEPGFFKTNLAN  217 (322)
T ss_pred             HHHHHHHHHHHHHHhcCcEEEEeccCccccccCC
Confidence            999999999999999 999999999999999875

>PRK07774 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-35  Score=238.48  Aligned_cols=214  Identities=32%  Similarity=0.473  Sum_probs=182.1

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      ++++|+++||||++|||++++++|+++|++|++++|+++..+...+++.+.+.+...+.+|+++.++++.+++++.+.++
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (250)
T PRK07774          3 RFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFG   82 (250)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            35789999999999999999999999999999999998877777777766666778899999999999999999999999


Q ss_pred             CCCEEEEcCCCCCC--CCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhH
Q 027248           89 KIDVVVSNAAANPS--VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTK  164 (226)
Q Consensus        89 ~id~li~nag~~~~--~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sK  164 (226)
                      ++|+||||||+...  ..++.+.+.++|++++++|+.++++++++++|.+.+  .++||++||..++.   +.+.|++||
T Consensus        83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~---~~~~Y~~sK  159 (250)
T PRK07774         83 GIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL---YSNFYGLAK  159 (250)
T ss_pred             CCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC---CccccHHHH
Confidence            99999999998642  345677889999999999999999999999999854  57999999987653   467899999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCc---hhhhhhccCCCCCchhhhccc
Q 027248          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND---GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       165 aa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +++++++++++.|+.+ +|+++.++||+++|++........   ...+.++..+..+|+++|+++
T Consensus       160 ~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~  224 (250)
T PRK07774        160 VGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTPKEFVADMVKGIPLSRMGTPEDLVGMC  224 (250)
T ss_pred             HHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            9999999999999987 999999999999999876543322   123334445577899988764

>PRK05875 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-35  Score=241.95  Aligned_cols=217  Identities=27%  Similarity=0.366  Sum_probs=186.0

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      ++++|+++|||++++||++++++|+++|++|++++|++++.+...+++...  +.++.++.+|++++++++++++++.+.
T Consensus         4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (276)
T PRK05875          4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAW   83 (276)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999988777776666544  246788899999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhH
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTK  164 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sK  164 (226)
                      ++++|++|||||......++.+.+.++|.+++++|+.+++.+++++.+.|.+  .++|+++||..+..+.++.+.|+++|
T Consensus        84 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK  163 (276)
T PRK05875         84 HGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRWFGAYGVTK  163 (276)
T ss_pred             cCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCCCCcchHHHH
Confidence            9999999999997643456777889999999999999999999999998854  47999999999988888899999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchh----hhhhccCCCCCchhhhccc
Q 027248          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGV----VSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       165 aa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~----~~~~~~~~~~~p~~~a~av  225 (226)
                      ++++.+++.++.|+.+ +|++++|+||+++|++..........    ....+..++..|+|+|+++
T Consensus       164 ~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  229 (276)
T PRK05875        164 SAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPELSADYRACTPLPRVGEVEDVANLA  229 (276)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHHHHHHHcCCCCCCCcCHHHHHHHH
Confidence            9999999999999987 99999999999999987654333222    2223445677899998764

>PRK08703 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-35  Score=237.07  Aligned_cols=210  Identities=20%  Similarity=0.270  Sum_probs=179.6

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcC-CcEEEEEeeCCC--HHHHHHHHHHHHH
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG-IEVIGVVCHVSN--GQQRKNLINQTIE   85 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~--~~~v~~~~~~~~~   85 (226)
                      +++||+++||||++|||++++++|+++|++|++++|++++.+...+++.+.+ .+...+.+|+++  .++++++++++.+
T Consensus         3 ~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~   82 (239)
T PRK08703          3 TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAE   82 (239)
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999988888877776543 356788899976  5688999999988


Q ss_pred             Hh-CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhH
Q 027248           86 KF-GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGV  162 (226)
Q Consensus        86 ~~-~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~  162 (226)
                      .+ +.+|++|||||......++.+.+.++|++.+++|+.+++.++++++|.|.+  .++++++||..+..+.++...|++
T Consensus        83 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~  162 (239)
T PRK08703         83 ATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGFGA  162 (239)
T ss_pred             HhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCCCCccchHH
Confidence            88 899999999998654467788999999999999999999999999999864  479999999999988888999999


Q ss_pred             hHHHHHHHHHHHHHHhCC--CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhcc
Q 027248          163 TKTALLGLTKALAAEMAP--DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLA  224 (226)
Q Consensus       163 sKaa~~~~~~~la~e~~~--~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~a  224 (226)
                      ||+++++|++.++.|+.+  +|+|+.|.||+++|++.........      ......|++++.+
T Consensus       163 sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~------~~~~~~~~~~~~~  220 (239)
T PRK08703        163 SKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSHPGEA------KSERKSYGDVLPA  220 (239)
T ss_pred             hHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccccCCCCC------ccccCCHHHHHHH
Confidence            999999999999999976  6999999999999998654432211      1234678887754

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-35  Score=240.60  Aligned_cols=216  Identities=28%  Similarity=0.417  Sum_probs=187.4

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      +++||+++||||+++||++++++|+++|++|++++|++++.++..+++.+.+.++.++++|+++.++++++++++.+.++
T Consensus         4 ~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   83 (262)
T PRK13394          4 NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFG   83 (262)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            56789999999999999999999999999999999999888888888877777788899999999999999999999899


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhh-hc--CCEEEEEeccCCcCCCCCCchhhHhHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHL-QK--GSSVVLISSIAGYQPQSSMAMYGVTKT  165 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l-~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKa  165 (226)
                      ++|+||||||... ..++.+.+.++|++++++|+.+++.+++.+++.+ ++  .++||++||..+..+.++...|+++|+
T Consensus        84 ~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~~~~~~y~~sk~  162 (262)
T PRK13394         84 SVDILVSNAGIQI-VNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKH  162 (262)
T ss_pred             CCCEEEECCccCC-CCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCCCCCcccHHHHH
Confidence            9999999999865 4566778889999999999999999999999999 44  479999999988888888999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCc---------hhh-----hhhccCCCCCchhhhccc
Q 027248          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND---------GVV-----SSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       166 a~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~---------~~~-----~~~~~~~~~~p~~~a~av  225 (226)
                      +++++++.++.++.+ +|+++.++||+++|++........         ...     .......+..|+|+|+++
T Consensus       163 a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~  237 (262)
T PRK13394        163 GLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQTV  237 (262)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcCCCCCCCCCHHHHHHHH
Confidence            999999999999987 999999999999999764432211         111     122345688999998864

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-35  Score=240.69  Aligned_cols=213  Identities=19%  Similarity=0.216  Sum_probs=182.6

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcC--CcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG--IEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      +|+++||||+++||+++++.|+++|++|++++|+.+..+...+++....  .++.++.+|+++.++++.+++++.+.+++
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            6899999999999999999999999999999999888877777665543  46889999999999999999999999999


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc---CCEEEEEeccCCcCCCCCCchhhHhHHH
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~---~~~iv~~sS~~~~~~~~~~~~Y~~sKaa  166 (226)
                      +|++|||||... ..++.+.+.++|++++++|+.+++++.+++++.|.+   .++||++||..+..+.+....|++||+|
T Consensus        82 id~vv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sKaa  160 (259)
T PRK12384         82 VDLLVYNAGIAK-AAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFG  160 (259)
T ss_pred             CCEEEECCCcCC-CCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCCCchhHHHHHH
Confidence            999999999875 567788899999999999999999999999999854   3699999999888788888999999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCc-eeCCccccccc---------Cch----hhhhhccCCCCCchhhhccc
Q 027248          167 LLGLTKALAAEMAP-DTRVNCVAPGF-VPTHFAEYITS---------NDG----VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       167 ~~~~~~~la~e~~~-~i~v~~v~Pg~-v~t~~~~~~~~---------~~~----~~~~~~~~~~~~p~~~a~av  225 (226)
                      +++++++++.|+.+ ||+|++++||. +.|++.....+         .+.    +....+..+...|+|+++++
T Consensus       161 ~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~  234 (259)
T PRK12384        161 GVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVLNML  234 (259)
T ss_pred             HHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCCCCHHHHHHHH
Confidence            99999999999988 99999999996 47776543321         111    22334566788999998875

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.6e-35  Score=236.43  Aligned_cols=212  Identities=26%  Similarity=0.414  Sum_probs=185.1

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      .++++|+++||||+++||++++++|+++|++|++++|+.++.+...+++...+.++.++.+|++++++++++++++.+.+
T Consensus         3 ~~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (239)
T PRK07666          3 QSLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNEL   82 (239)
T ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            34678999999999999999999999999999999999888877777776666678889999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHH
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKT  165 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKa  165 (226)
                      +++|++|||+|... ...+.+.+.++|++.+++|+.+++.+.+++.|.+.+  .+++|++||..+..+.++...|+.+|+
T Consensus        83 ~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~  161 (239)
T PRK07666         83 GSIDILINNAGISK-FGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYSASKF  161 (239)
T ss_pred             CCccEEEEcCcccc-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCCCcchHHHHH
Confidence            99999999999865 456778889999999999999999999999998854  478999999999888888999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       166 a~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +++.+++.++.|+.+ ||+++.|+||+++|++.........     ....+.+|+++|+++
T Consensus       162 a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~-----~~~~~~~~~~~a~~~  217 (239)
T PRK07666        162 GVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLGLTDG-----NPDKVMQPEDLAEFI  217 (239)
T ss_pred             HHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhcccccc-----CCCCCCCHHHHHHHH
Confidence            999999999999988 9999999999999998755422111     123567889988764

>PLN00015 protochlorophyllide reductase

Probab=100.00  E-value=8.1e-36  Score=248.22  Aligned_cols=210  Identities=14%  Similarity=0.116  Sum_probs=171.4

Q ss_pred             EEEcCCCchhHHHHHHHHhCC-CeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCEEE
Q 027248           16 IVTASTQGIGFGIAERLGLEG-ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVV   94 (226)
Q Consensus        16 lItGa~~giG~a~~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~li   94 (226)
                      |||||++|||++++++|+++| ++|++++|+.++.+...+++...+.++.++.+|+++.++++.+++++.+.++++|+||
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI   80 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV   80 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            699999999999999999999 9999999998888777777654455678889999999999999999998889999999


Q ss_pred             EcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc----CCEEEEEeccCCcCC-----------------
Q 027248           95 SNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK----GSSVVLISSIAGYQP-----------------  153 (226)
Q Consensus        95 ~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~----~~~iv~~sS~~~~~~-----------------  153 (226)
                      ||||+.....+..+.+.++|++++++|+.|++.+++.++|.|++    +++||++||..+..+                 
T Consensus        81 nnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~  160 (308)
T PLN00015         81 CNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRG  160 (308)
T ss_pred             ECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhhhh
Confidence            99998643335667889999999999999999999999999854    379999999876421                 


Q ss_pred             ------------------CCCCchhhHhHHHHHHHHHHHHHHhCC--CeEEEEEecCce-eCCcccccccCch----hhh
Q 027248          154 ------------------QSSMAMYGVTKTALLGLTKALAAEMAP--DTRVNCVAPGFV-PTHFAEYITSNDG----VVS  208 (226)
Q Consensus       154 ------------------~~~~~~Y~~sKaa~~~~~~~la~e~~~--~i~v~~v~Pg~v-~t~~~~~~~~~~~----~~~  208 (226)
                                        .++..+|++||+|...+++.++.++.+  ||+|++|+||+| +|+|.+.......    ...
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~~~~~~~~  240 (308)
T PLN00015        161 LAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRLLFPPFQ  240 (308)
T ss_pred             hhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHHHHHHHHHHH
Confidence                              124567999999988889999999953  899999999999 7998765321110    011


Q ss_pred             hhccCCCCCchhhhccc
Q 027248          209 SVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       209 ~~~~~~~~~p~~~a~av  225 (226)
                      .....++.+|++.|..+
T Consensus       241 ~~~~~~~~~pe~~a~~~  257 (308)
T PLN00015        241 KYITKGYVSEEEAGKRL  257 (308)
T ss_pred             HHHhcccccHHHhhhhh
Confidence            22334578889888753

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=100.00  E-value=1.4e-35  Score=247.45  Aligned_cols=189  Identities=17%  Similarity=0.174  Sum_probs=162.8

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCC-CeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEG-ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      .+|+++||||++|||++++++|+++| ++|++++|+.++.++..+++...+.++.++.+|+++.++++.+++++.+.+++
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   81 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRP   81 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            36899999999999999999999999 99999999998887777776544556788899999999999999999888899


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcC----CEEEEEeccCCcCC------------
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKG----SSVVLISSIAGYQP------------  153 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~----~~iv~~sS~~~~~~------------  153 (226)
                      +|+||||||+.....+..+.+.++|++++++|+.+++.+++.++|+|++.    ++||++||..+...            
T Consensus        82 iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~  161 (314)
T TIGR01289        82 LDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKANL  161 (314)
T ss_pred             CCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCcccc
Confidence            99999999985422334567889999999999999999999999999643    79999999976421            


Q ss_pred             ---------------------CCCCchhhHhHHHHHHHHHHHHHHhC-C-CeEEEEEecCce-eCCcccc
Q 027248          154 ---------------------QSSMAMYGVTKTALLGLTKALAAEMA-P-DTRVNCVAPGFV-PTHFAEY  199 (226)
Q Consensus       154 ---------------------~~~~~~Y~~sKaa~~~~~~~la~e~~-~-~i~v~~v~Pg~v-~t~~~~~  199 (226)
                                           ..+...|++||+|+..+++.|++++. + ||+|++|+||+| +|++.+.
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~  231 (314)
T TIGR01289       162 GDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFRE  231 (314)
T ss_pred             cccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCccccc
Confidence                                 12456799999999999999999984 4 899999999999 6998754

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK09072 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-35  Score=239.84  Aligned_cols=211  Identities=23%  Similarity=0.338  Sum_probs=181.2

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      ++++|+++||||++|||++++++|+++|++|++++|++++++....++ +.+.++.++.+|++++++++.+++.+.+ ++
T Consensus         2 ~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~-~~   79 (263)
T PRK09072          2 DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL-PYPGRHRWVVADLTSEAGREAVLARARE-MG   79 (263)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-hcCCceEEEEccCCCHHHHHHHHHHHHh-cC
Confidence            357899999999999999999999999999999999988887777776 4456788899999999999999998876 78


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcC--CEEEEEeccCCcCCCCCCchhhHhHHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKG--SSVVLISSIAGYQPQSSMAMYGVTKTA  166 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~--~~iv~~sS~~~~~~~~~~~~Y~~sKaa  166 (226)
                      .+|++|||||... ..++.+.+.+++++++++|+.|++.+++.+.|+|++.  ++||++||..+..+.++...|+++|++
T Consensus        80 ~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  158 (263)
T PRK09072         80 GINVLINNAGVNH-FALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPGYASYCASKFA  158 (263)
T ss_pred             CCCEEEECCCCCC-ccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCCCccHHHHHHHH
Confidence            9999999999865 5677888999999999999999999999999998654  789999999998888999999999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       167 ~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +.++++.++.|+.+ +|+|++++||+++|++.......  .... ...+..+|+++|.++
T Consensus       159 ~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~--~~~~-~~~~~~~~~~va~~i  215 (263)
T PRK09072        159 LRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAVQA--LNRA-LGNAMDDPEDVAAAV  215 (263)
T ss_pred             HHHHHHHHHHHhcccCcEEEEEecCcccccchhhhccc--cccc-ccCCCCCHHHHHHHH
Confidence            99999999999988 99999999999999986543211  1111 122467888888654

>PRK06196 oxidoreductase; Provisional

Probab=100.00  E-value=9.2e-36  Score=248.62  Aligned_cols=211  Identities=21%  Similarity=0.242  Sum_probs=172.7

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      .+++||+++||||++|||++++++|+++|++|++++|+.++.++..+++.    .+.++.+|+++.++++++++++.+.+
T Consensus        22 ~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~----~v~~~~~Dl~d~~~v~~~~~~~~~~~   97 (315)
T PRK06196         22 HDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID----GVEVVMLDLADLESVRAFAERFLDSG   97 (315)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh----hCeEEEccCCCHHHHHHHHHHHHhcC
Confidence            45689999999999999999999999999999999999887777666553    36788999999999999999999989


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcC--CEEEEEeccCCcC------------C
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKG--SSVVLISSIAGYQ------------P  153 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~--~~iv~~sS~~~~~------------~  153 (226)
                      +++|+||||||+...   ..+.+.++|+..+++|+.|++.+++.++|.|++.  ++||++||..+..            +
T Consensus        98 ~~iD~li~nAg~~~~---~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~  174 (315)
T PRK06196         98 RRIDILINNAGVMAC---PETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRG  174 (315)
T ss_pred             CCCCEEEECCCCCCC---CCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccCC
Confidence            999999999998642   2345678899999999999999999999998653  7999999986532            2


Q ss_pred             CCCCchhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch----hhhh---hccCCCCCchhhhccc
Q 027248          154 QSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG----VVSS---VSSLKLSPPSSLTLAV  225 (226)
Q Consensus       154 ~~~~~~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~----~~~~---~~~~~~~~p~~~a~av  225 (226)
                      .++...|+.||++++.+++.|+.++.+ ||++++|+||+++|++.+.......    +...   ....++.+|+++|.++
T Consensus       175 ~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~  254 (315)
T PRK06196        175 YDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHGNPIDPGFKTPAQGAATQ  254 (315)
T ss_pred             CChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhhhhhhhhcCCHhHHHHHH
Confidence            345678999999999999999999987 9999999999999998765432211    1100   0111467889888754

>PRK08267 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-35  Score=238.50  Aligned_cols=210  Identities=25%  Similarity=0.232  Sum_probs=178.1

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH-hCCCC
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK-FGKID   91 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~~~id   91 (226)
                      |+++||||++|||++++++|+++|++|++++|+.+++++...++.  +.++.++++|+++.++++++++.+.+. ++++|
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id   79 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG--AGNAWTGALDVTDRAAWDAALADFAAATGGRLD   79 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCC
Confidence            789999999999999999999999999999999888777766554  456888999999999999999988776 78999


Q ss_pred             EEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHHHHH
Q 027248           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLG  169 (226)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~  169 (226)
                      +||||||... ...+.+.+.+++++++++|+.+++.+++++.++|++  .++||++||..+..+.++...|+.||+++++
T Consensus        80 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~  158 (260)
T PRK08267         80 VLFNNAGILR-GGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPGLAVYSATKFAVRG  158 (260)
T ss_pred             EEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCCchhhHHHHHHHHH
Confidence            9999999875 467778889999999999999999999999999854  5799999999999888999999999999999


Q ss_pred             HHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          170 LTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       170 ~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ++++|+.|+.+ +|++++++||+++|++.+..................+|+++|.++
T Consensus       159 ~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~  215 (260)
T PRK08267        159 LTEALDLEWRRHGIRVADVMPLFVDTAMLDGTSNEVDAGSTKRLGVRLTPEDVAEAV  215 (260)
T ss_pred             HHHHHHHHhcccCcEEEEEecCCcCCcccccccchhhhhhHhhccCCCCHHHHHHHH
Confidence            99999999988 999999999999999876521111111111123346778888763

>PRK06180 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.1e-35  Score=240.45  Aligned_cols=211  Identities=21%  Similarity=0.297  Sum_probs=178.4

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      .+|+++||||+||||++++++|+++|++|++++|++++++...+.   .+.++..+.+|+++++++..+++.+.+.++.+
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~---~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~   79 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEAL---HPDRALARLLDVTDFDAIDAVVADAEATFGPI   79 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhh---cCCCeeEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            368999999999999999999999999999999998776554332   23467788999999999999999999999999


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHHHH
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALL  168 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~  168 (226)
                      |+||||||... ..+..+.+.++|++++++|+.|+++++++++|++++  .++||++||.++..+.++...|+++|++++
T Consensus        80 d~vv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~~~~~Y~~sK~a~~  158 (277)
T PRK06180         80 DVLVNNAGYGH-EGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSKFALE  158 (277)
T ss_pred             CEEEECCCccC-CcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCCCcchhHHHHHHHH
Confidence            99999999865 567788899999999999999999999999999864  479999999999988899999999999999


Q ss_pred             HHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC-----chhh----------hhhccCCCCCchhhhccc
Q 027248          169 GLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN-----DGVV----------SSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       169 ~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~-----~~~~----------~~~~~~~~~~p~~~a~av  225 (226)
                      +++++++.|+.+ |+++++++||+++|++.......     ..+.          .......+.+|+++|+++
T Consensus       159 ~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  231 (277)
T PRK06180        159 GISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSGKQPGDPAKAAQAI  231 (277)
T ss_pred             HHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhccCCCCCHHHHHHHH
Confidence            999999999988 99999999999999875432211     1110          112234567899998764

>PRK06123 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.3e-35  Score=236.19  Aligned_cols=214  Identities=23%  Similarity=0.316  Sum_probs=177.8

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEec-CcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSR-KQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      +|+++||||+++||.+++++|+++|++|++..+ +++..+...+++...+.++.++.+|+++.++++++++++.++++++
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL   81 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            489999999999999999999999999888774 4455556666666656678889999999999999999999999999


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc-----CCEEEEEeccCCcCCCCC-CchhhHhH
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-----GSSVVLISSIAGYQPQSS-MAMYGVTK  164 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~-----~~~iv~~sS~~~~~~~~~-~~~Y~~sK  164 (226)
                      |+||||||......++.+.+.++|++++++|+.+++.+++++++.|++     +++||++||..+..+.++ ...|++||
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~Y~~sK  161 (248)
T PRK06123         82 DALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAASK  161 (248)
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCCccchHHHH
Confidence            999999998754456778889999999999999999999999999853     368999999988877766 46799999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch---hhhhhccCCCCCchhhhccc
Q 027248          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG---VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       165 aa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~---~~~~~~~~~~~~p~~~a~av  225 (226)
                      +++++|++.++.|+.+ ||++++++||++.|++......+..   +....+..+...|+|+++++
T Consensus       162 aa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~d~a~~~  226 (248)
T PRK06123        162 GAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGGEPGRVDRVKAGIPMGRGGTAEEVARAI  226 (248)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            9999999999999988 9999999999999997543222111   22233444567889988764

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=100.00  E-value=1.7e-35  Score=241.52  Aligned_cols=212  Identities=27%  Similarity=0.337  Sum_probs=165.8

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecC-cchHHHHHHHHHhc-CCcEEEEEeeCCCHHHH----HHHHHHHHHH
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRK-QKNVDEAVVKLKAR-GIEVIGVVCHVSNGQQR----KNLINQTIEK   86 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~-~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v----~~~~~~~~~~   86 (226)
                      ++++||||++|||++++++|+++|++|++++|+ ++.++...+++... +.+..++.+|+++++++    +++++++.+.
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~   81 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA   81 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence            689999999999999999999999999988764 56666666666543 44667789999999865    5556666677


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccH-----------HHHHHHHHHHHHHHHHHHHHHhhhhhc--------CCEEEEEec
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKE-----------SVLDKLWDINVKSSILLLQDAAPHLQK--------GSSVVLISS  147 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~-----------~~~~~~~~~N~~~~~~~~~~~~~~l~~--------~~~iv~~sS  147 (226)
                      ++++|+||||||... ..++.+.+.           ++|.+++++|+.+++.+++++.|+|++        .++|++++|
T Consensus        82 ~g~iD~lv~nAG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s  160 (267)
T TIGR02685        82 FGRCDVLVNNASAFY-PTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCD  160 (267)
T ss_pred             cCCceEEEECCccCC-CCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehh
Confidence            899999999999764 233333333           358999999999999999999999843        257999999


Q ss_pred             cCCcCCCCCCchhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchhhhhhcc-CCCCCchhhhccc
Q 027248          148 IAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSS-LKLSPPSSLTLAV  225 (226)
Q Consensus       148 ~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~-~~~~~p~~~a~av  225 (226)
                      ..+..+.++..+|++||+|+++|+++|+.|+.+ ||+|++|+||+++|+..........+....+. .++.+|+++|+++
T Consensus       161 ~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~  240 (267)
T TIGR02685       161 AMTDQPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMPFEVQEDYRRKVPLGQREASAEQIADVV  240 (267)
T ss_pred             hhccCCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccchhHHHHHHHhCCCCcCCCCHHHHHHHH
Confidence            999888899999999999999999999999988 99999999999987622110001112222232 2578999998874

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=100.00  E-value=4e-35  Score=235.78  Aligned_cols=213  Identities=23%  Similarity=0.405  Sum_probs=182.6

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      ++++|+++||||+++||+++++.|+++|+.|++.+|+.++++.....+   +.++.++.+|+++.++++++++++.+.++
T Consensus         3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (245)
T PRK12936          3 DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL---GERVKIFPANLSDRDEVKALGQKAEADLE   79 (245)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            467899999999999999999999999999999999887776655443   34677889999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhh--cCCEEEEEeccCCcCCCCCCchhhHhHHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~--~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa  166 (226)
                      ++|++|||||... ..++.+.+.++|++++++|+.+++++++++.+.++  +.++||++||..+..+.++...|+++|++
T Consensus        80 ~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sk~a  158 (245)
T PRK12936         80 GVDILVNNAGITK-DGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPGQANYCASKAG  158 (245)
T ss_pred             CCCEEEECCCCCC-CCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCCCcchHHHHHH
Confidence            9999999999875 45677788899999999999999999999998773  35799999999888888999999999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCc--hhhhhhccCCCCCchhhhccc
Q 027248          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND--GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       167 ~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~--~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +.++++.++.++.+ ++++++++||+++|++........  ......+..++.+|+++++++
T Consensus       159 ~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~  220 (245)
T PRK12936        159 MIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLNDKQKEAIMGAIPMKRMGTGAEVASAV  220 (245)
T ss_pred             HHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccChHHHHHHhcCCCCCCCcCHHHHHHHH
Confidence            99999999999987 999999999999999876542211  122334556688899998764

>PRK09186 flagellin modification protein A; Provisional

Probab=100.00  E-value=4.1e-35  Score=237.40  Aligned_cols=214  Identities=22%  Similarity=0.321  Sum_probs=176.6

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      ++||+++||||++|||++++++|+++|++|++++|++++++...+++...  +..+.++.+|++++++++++++++.+.+
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   81 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY   81 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999999999999998888877777543  2345667999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCC--CCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCC---------
Q 027248           88 GKIDVVVSNAAANPS--VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQ---------  154 (226)
Q Consensus        88 ~~id~li~nag~~~~--~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~---------  154 (226)
                      +++|+||||||....  ..++.+.+.++|++++++|+.+++.++++++|.|++  .++||++||..+..+.         
T Consensus        82 ~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~  161 (256)
T PRK09186         82 GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGTS  161 (256)
T ss_pred             CCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchhccccc
Confidence            999999999986431  346778899999999999999999999999999954  4799999998765321         


Q ss_pred             -CCCchhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          155 -SSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       155 -~~~~~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                       .....|++||+++++|+++++.|+.+ +|+|++++||++.|+......  ..+....+..++.+|+|+|+++
T Consensus       162 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~~~~--~~~~~~~~~~~~~~~~dva~~~  232 (256)
T PRK09186        162 MTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPEAFL--NAYKKCCNGKGMLDPDDICGTL  232 (256)
T ss_pred             cCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCHHHH--HHHHhcCCccCCCCHHHhhhhH
Confidence             12246999999999999999999988 999999999999887532221  1222333456789999999875

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=5.1e-35  Score=236.20  Aligned_cols=216  Identities=35%  Similarity=0.532  Sum_probs=182.8

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecC-cchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRK-QKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      ++++|+++||||+++||++++++|+++|++|++..|+ .+........+.+.+.+...+.+|++++++++.+++++.+.+
T Consensus         3 ~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (252)
T PRK06077          3 SLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRY   82 (252)
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHc
Confidence            3568999999999999999999999999998877754 444445555566556677889999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHhHHHH
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~  167 (226)
                      +++|++|||||... ..+..+.+.++|++.+++|+.+++.+++++.|.+++.+++|++||..+..+.++...|++||+++
T Consensus        83 ~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~  161 (252)
T PRK06077         83 GVADILVNNAGLGL-FSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRPAYGLSIYGAMKAAV  161 (252)
T ss_pred             CCCCEEEECCCCCC-CCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCCCCCchHHHHHHHHH
Confidence            99999999999865 45677788889999999999999999999999998888999999999998999999999999999


Q ss_pred             HHHHHHHHHHhCCCeEEEEEecCceeCCcccccccC-----chhhhh-hccCCCCCchhhhccc
Q 027248          168 LGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSN-----DGVVSS-VSSLKLSPPSSLTLAV  225 (226)
Q Consensus       168 ~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~~~~~~~-----~~~~~~-~~~~~~~~p~~~a~av  225 (226)
                      +++++.++.|+.++|+++.+.||+++|++.......     ..+.+. .....+..|+|+|+++
T Consensus       162 ~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  225 (252)
T PRK06077        162 INLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKFTLMGKILDPEEVAEFV  225 (252)
T ss_pred             HHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhcccccHHHHHHhcCcCCCCCCHHHHHHHH
Confidence            999999999998899999999999999986543221     111211 2234679999999874

>PRK06138 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.5e-35  Score=236.50  Aligned_cols=215  Identities=27%  Similarity=0.392  Sum_probs=183.8

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      +++||+++||||+++||++++++|+++|++|++++|+.+..+...+++. .+.++..+.+|++++++++++++++.++++
T Consensus         2 ~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   80 (252)
T PRK06138          2 RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA-AGGRAFARQGDVGSAEAVEALVDFVAARWG   80 (252)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4678999999999999999999999999999999999887777666665 455688999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa  166 (226)
                      ++|+||||+|... ...+.+.+.++|++++++|+.+++.+.+.+++.|++  .++|+++||..+..+.++...|+.+|++
T Consensus        81 ~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~a  159 (252)
T PRK06138         81 RLDVLVNNAGFGC-GGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVASKGA  159 (252)
T ss_pred             CCCEEEECCCCCC-CCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCCccHHHHHHHH
Confidence            9999999999865 456677889999999999999999999999999864  4689999999888888899999999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC----chhhh----hhccCCCCCchhhhccc
Q 027248          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN----DGVVS----SVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       167 ~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~----~~~~~----~~~~~~~~~p~~~a~av  225 (226)
                      ++.++++++.|+.+ ||++++++||++.|++.+.....    .....    ..+..++..|+++|.++
T Consensus       160 ~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~  227 (252)
T PRK06138        160 IASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPMNRFGTAEEVAQAA  227 (252)
T ss_pred             HHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            99999999999987 99999999999999987654321    11111    11223467889988653

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=3.7e-35  Score=236.70  Aligned_cols=213  Identities=25%  Similarity=0.329  Sum_probs=177.7

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEe-cCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCC
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSS-RKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id   91 (226)
                      |+++||||++|||.++++.|+++|++|+++. |+++.++....++...+.++..+.+|++++++++.+++++.+.++++|
T Consensus         3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   82 (248)
T PRK06947          3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRLD   82 (248)
T ss_pred             cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCCC
Confidence            7899999999999999999999999988764 566667777777766667889999999999999999999999899999


Q ss_pred             EEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc-----CCEEEEEeccCCcCCCCC-CchhhHhHH
Q 027248           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-----GSSVVLISSIAGYQPQSS-MAMYGVTKT  165 (226)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~-----~~~iv~~sS~~~~~~~~~-~~~Y~~sKa  165 (226)
                      +||||||......++.+.+.++|++++++|+.+++++++++++.+..     .++||++||..+..+.++ +..|++||+
T Consensus        83 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~~Y~~sK~  162 (248)
T PRK06947         83 ALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAGSKG  162 (248)
T ss_pred             EEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCCCCcccHhhHH
Confidence            99999998654456778889999999999999999999999998743     357999999988776654 578999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCc---hhhhhhccCCCCCchhhhccc
Q 027248          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND---GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       166 a~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ++++|++.|+.++.+ ||+|+.++||+++|++.+......   ......+..+..+|+++|+++
T Consensus       163 ~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~~  226 (248)
T PRK06947        163 AVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQPGRAARLGAQTPLGRAGEADEVAETI  226 (248)
T ss_pred             HHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCCHHHHHHHhhcCCCCCCcCHHHHHHHH
Confidence            999999999999988 999999999999999864321111   112233345578899998764

>PRK05884 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-35  Score=234.44  Aligned_cols=189  Identities=19%  Similarity=0.227  Sum_probs=156.6

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCEE
Q 027248           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVV   93 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~l   93 (226)
                      +++||||++|||++++++|+++|++|++++|++++++...+++     .+..+++|++++++++++++++.+   ++|++
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~~~~---~id~l   73 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL-----DVDAIVCDNTDPASLEEARGLFPH---HLDTI   73 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----cCcEEecCCCCHHHHHHHHHHHhh---cCcEE
Confidence            3899999999999999999999999999999988776665544     245788999999999998887643   79999


Q ss_pred             EEcCCCCCC-----CCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHhHHHHH
Q 027248           94 VSNAAANPS-----VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALL  168 (226)
Q Consensus        94 i~nag~~~~-----~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~  168 (226)
                      |||||....     ...+.+ +.++|++++++|+.++++++++++|.|+++|+||++||..    .++...|++||+|++
T Consensus        74 v~~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~----~~~~~~Y~asKaal~  148 (223)
T PRK05884         74 VNVPAPSWDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPEN----PPAGSAEAAIKAALS  148 (223)
T ss_pred             EECCCccccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCC----CCCccccHHHHHHHH
Confidence            999985321     112334 4789999999999999999999999998889999999976    356688999999999


Q ss_pred             HHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          169 GLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       169 ~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +|+++|+.|+.+ ||+||+|+||+++|++.+...          ......|+|+|+++
T Consensus       149 ~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~~~~----------~~p~~~~~~ia~~~  196 (223)
T PRK05884        149 NWTAGQAAVFGTRGITINAVACGRSVQPGYDGLS----------RTPPPVAAEIARLA  196 (223)
T ss_pred             HHHHHHHHHhhhcCeEEEEEecCccCchhhhhcc----------CCCCCCHHHHHHHH
Confidence            999999999988 999999999999999753321          11224788888764

>PRK08263 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.3e-35  Score=240.06  Aligned_cols=211  Identities=25%  Similarity=0.344  Sum_probs=180.2

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      .+|+++||||++|||++++++|+++|++|++++|+.+.++...+..   +..+..+++|++++++++.+++++.+.++.+
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY---GDRLLPLALDVTDRAAVFAAVETAVEHFGRL   78 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc---cCCeeEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            3689999999999999999999999999999999987766554433   3457788999999999999999999999999


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHHHH
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALL  168 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~  168 (226)
                      |++|||||... ..++.+.+.++|++++++|+.+++.+++.++|.|++  .++||++||..+..+.++.+.|++||++++
T Consensus        79 d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~  157 (275)
T PRK08263         79 DIVVNNAGYGL-FGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPMSGIYHASKWALE  157 (275)
T ss_pred             CEEEECCCCcc-ccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCCccHHHHHHHHHH
Confidence            99999999875 577888899999999999999999999999999864  479999999999999999999999999999


Q ss_pred             HHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC-----------chhhhhhccCCC-CCchhhhccc
Q 027248          169 GLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN-----------DGVVSSVSSLKL-SPPSSLTLAV  225 (226)
Q Consensus       169 ~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~-----------~~~~~~~~~~~~-~~p~~~a~av  225 (226)
                      ++++.++.|+.+ ||+++.++||+++|++.......           ...........+ ..|+++|+++
T Consensus       158 ~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~~  227 (275)
T PRK08263        158 GMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQWSERSVDGDPEAAAEAL  227 (275)
T ss_pred             HHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHHHHhccCCCCHHHHHHHH
Confidence            999999999988 99999999999999987421110           111222344456 8899998764

>PRK09134 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.1e-35  Score=235.94  Aligned_cols=215  Identities=22%  Similarity=0.285  Sum_probs=178.8

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecC-cchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRK-QKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      ..+|+++||||++|||++++++|+++|++|+++.++ .+..+...+++...+.++.++.+|+++.++++.+++++.+.++
T Consensus         7 ~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   86 (258)
T PRK09134          7 AAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALG   86 (258)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            468999999999999999999999999999887664 4556666666666667788899999999999999999999899


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa  166 (226)
                      ++|+||||||... ..++.+.+.++|++++++|+.+++.+++++.+.+.+  .++||+++|..+..+.|+...|++||++
T Consensus        87 ~iD~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p~~~~Y~~sK~a  165 (258)
T PRK09134         87 PITLLVNNASLFE-YDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNPDFLSYTLSKAA  165 (258)
T ss_pred             CCCEEEECCcCCC-CCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCCCchHHHHHHHH
Confidence            9999999999865 456778899999999999999999999999999854  4799999998887778888899999999


Q ss_pred             HHHHHHHHHHHhCCCeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          167 LLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       167 ~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ++++++.++.|+.++|++++++||++.|+.......-..........+...|+|+|+++
T Consensus       166 ~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~  224 (258)
T PRK09134        166 LWTATRTLAQALAPRIRVNAIGPGPTLPSGRQSPEDFARQHAATPLGRGSTPEEIAAAV  224 (258)
T ss_pred             HHHHHHHHHHHhcCCcEEEEeecccccCCcccChHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            99999999999977899999999999987532111001112223445678899998764

>PRK06179 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.8e-35  Score=239.02  Aligned_cols=182  Identities=27%  Similarity=0.422  Sum_probs=165.1

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      ++|+++||||+||||++++++|+++|++|++++|++++.+.        ..++.++.+|++|+++++++++.+.+.++++
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~--------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~   74 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP--------IPGVELLELDVTDDASVQAAVDEVIARAGRI   74 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc--------cCCCeeEEeecCCHHHHHHHHHHHHHhCCCC
Confidence            46899999999999999999999999999999998765422        1356788999999999999999999999999


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHHHH
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALL  168 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~  168 (226)
                      |+||||||... ..++.+.+.+++++++++|+.|+++++++++|.|++  .++||++||..+..+.++...|++||++++
T Consensus        75 d~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~  153 (270)
T PRK06179         75 DVLVNNAGVGL-AGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPYMALYAASKHAVE  153 (270)
T ss_pred             CEEEECCCCCC-CcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCCCccHHHHHHHHHH
Confidence            99999999876 567788899999999999999999999999999965  479999999999989999999999999999


Q ss_pred             HHHHHHHHHhCC-CeEEEEEecCceeCCcccccc
Q 027248          169 GLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYIT  201 (226)
Q Consensus       169 ~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~  201 (226)
                      ++++.++.|+.+ ||++++++||+++|++.....
T Consensus       154 ~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~  187 (270)
T PRK06179        154 GYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAP  187 (270)
T ss_pred             HHHHHHHHHHhhhCcEEEEEeCCCcccccccccC
Confidence            999999999988 999999999999999876543

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=6.6e-35  Score=236.19  Aligned_cols=215  Identities=28%  Similarity=0.425  Sum_probs=187.4

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      +++|+++||||+++||++++++|+++|++|++++|++++.+....++...+.++..+.+|++++++++++++.+.+.++.
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   81 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGG   81 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            46799999999999999999999999999999999998888888887776778889999999999999999999999999


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHHH
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~  167 (226)
                      +|+||||||... ..+..+.+.+++++++++|+.+++++++.+++.|++  .++||++||..+..+.++.+.|+++|+++
T Consensus        82 ~d~vi~~a~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~~k~a~  160 (258)
T PRK12429         82 VDILVNNAGIQH-VAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAGKAAYVSAKHGL  160 (258)
T ss_pred             CCEEEECCCCCC-CCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCcchhHHHHHHH
Confidence            999999999865 567778889999999999999999999999999854  46899999999999999999999999999


Q ss_pred             HHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC---------c-----hhhhhhccCCCCCchhhhccc
Q 027248          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN---------D-----GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       168 ~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~---------~-----~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +++++.++.|+.+ +|+++.++||+++|++.......         .     .+........+.+++|+|+++
T Consensus       161 ~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~  233 (258)
T PRK12429        161 IGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEEIADYA  233 (258)
T ss_pred             HHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhccCCccccCCHHHHHHHH
Confidence            9999999999987 99999999999999986543211         0     011122345688999998763

>PRK06198 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9e-35  Score=235.98  Aligned_cols=216  Identities=28%  Similarity=0.423  Sum_probs=184.6

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCe-EEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      .+++|+++||||+++||+.++++|+++|++ |++++|+.++.+...+++.+.+.++..+.+|++++++++++++.+.+++
T Consensus         3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (260)
T PRK06198          3 RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAF   82 (260)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            367899999999999999999999999999 9999999888777777776666778889999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc---CCEEEEEeccCCcCCCCCCchhhHhH
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTK  164 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~---~~~iv~~sS~~~~~~~~~~~~Y~~sK  164 (226)
                      +++|++|||+|... ..++.+.+.++|++++++|+.+++.+++++++.|++   .+++|++||..+..+.++...|+.+|
T Consensus        83 g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK  161 (260)
T PRK06198         83 GRLDALVNAAGLTD-RGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCASK  161 (260)
T ss_pred             CCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCCcchhHHHH
Confidence            99999999999865 456778889999999999999999999999999854   37899999999888888899999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCceeCCccccccc-----Cchh----hhhhccCCCCCchhhhccc
Q 027248          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS-----NDGV----VSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       165 aa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~-----~~~~----~~~~~~~~~~~p~~~a~av  225 (226)
                      +++++|+++++.|+.+ +|++++++||+++|++......     ...+    ....+..++.+|+++|+++
T Consensus       162 ~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~  232 (260)
T PRK06198        162 GALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQPFGRLLDPDEVARAV  232 (260)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccCCccCCcCHHHHHHHH
Confidence            9999999999999988 9999999999999997532111     0111    1122345678899998764

>PRK06057 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.7e-35  Score=236.34  Aligned_cols=211  Identities=27%  Similarity=0.430  Sum_probs=176.6

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      ++||+++||||++|||.+++++|+++|++|++++|++++.+...+++.     ..++++|++++++++++++++.+.+++
T Consensus         5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~-----~~~~~~D~~~~~~~~~~~~~~~~~~~~   79 (255)
T PRK06057          5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG-----GLFVPTDVTDEDAVNALFDTAAETYGS   79 (255)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC-----CcEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence            678999999999999999999999999999999998876655554442     246889999999999999999998899


Q ss_pred             CCEEEEcCCCCCC-CCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCC-CCCchhhHhHH
Q 027248           90 IDVVVSNAAANPS-VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQ-SSMAMYGVTKT  165 (226)
Q Consensus        90 id~li~nag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~-~~~~~Y~~sKa  165 (226)
                      +|++|||||.... ..++.+.+.++|++.+++|+.+++++++.++|+|++  .++||++||..+..+. ++...|+++|+
T Consensus        80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~~~~~Y~~sKa  159 (255)
T PRK06057         80 VDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATSQISYTASKG  159 (255)
T ss_pred             CCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCCCCcchHHHHH
Confidence            9999999997642 245677888999999999999999999999999854  4799999998776654 46788999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCc--hh---hhhhccCCCCCchhhhccc
Q 027248          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND--GV---VSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       166 a~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~--~~---~~~~~~~~~~~p~~~a~av  225 (226)
                      +++++++.++.|+.+ ||++++++||+++|++........  ..   ....+..++.+|+|+|+++
T Consensus       160 al~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~  225 (255)
T PRK06057        160 GVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAARRLVHVPMGRFAEPEEIAAAV  225 (255)
T ss_pred             HHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            999999999999988 999999999999999876543211  11   1123445789999999764

>PRK08251 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-34  Score=233.33  Aligned_cols=203  Identities=21%  Similarity=0.313  Sum_probs=177.3

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      +|+++||||++|||++++++|+++|++|++++|++++++...+++.+.  +.++.++.+|++++++++++++++.+++++
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            689999999999999999999999999999999998888777766654  456888999999999999999999999999


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCC-CchhhHhHHH
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSS-MAMYGVTKTA  166 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~-~~~Y~~sKaa  166 (226)
                      +|++|||||+.. ...+.+.+.+.+++++++|+.+++.++++++|.+++  .++||++||..+..+.++ ...|+.||++
T Consensus        82 id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a  160 (248)
T PRK08251         82 LDRVIVNAGIGK-GARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPGVKAAYAASKAG  160 (248)
T ss_pred             CCEEEECCCcCC-CCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCCCCcccHHHHHHH
Confidence            999999999875 456677788999999999999999999999999854  478999999988877775 6889999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhcc
Q 027248          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLA  224 (226)
Q Consensus       167 ~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~a  224 (226)
                      ++++++.++.|+.. +|++++++||+++|++.+....         .....+|+++|++
T Consensus       161 ~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~---------~~~~~~~~~~a~~  210 (248)
T PRK08251        161 VASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKAKS---------TPFMVDTETGVKA  210 (248)
T ss_pred             HHHHHHHHHHHhcccCcEEEEEecCcCcchhhhcccc---------CCccCCHHHHHHH
Confidence            99999999999987 9999999999999998765422         1235667777754

>PRK05693 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.6e-35  Score=238.11  Aligned_cols=180  Identities=26%  Similarity=0.395  Sum_probs=163.0

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCE
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~   92 (226)
                      |+++||||++|||++++++|+++|++|++++|+.++++...    +.  .+.++.+|++++++++++++.+.+.++++|+
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~----~~--~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   75 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALA----AA--GFTAVQLDVNDGAALARLAEELEAEHGGLDV   75 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HC--CCeEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            78999999999999999999999999999999886654432    22  3567889999999999999999999999999


Q ss_pred             EEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc-CCEEEEEeccCCcCCCCCCchhhHhHHHHHHHH
Q 027248           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLT  171 (226)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~-~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~  171 (226)
                      +|||||... ..++.+.+.++|++.+++|+.|++.++++++|.|++ .++||++||..+..+.++...|++||+++++|+
T Consensus        76 vi~~ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~  154 (274)
T PRK05693         76 LINNAGYGA-MGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVTPFAGAYCASKAAVHALS  154 (274)
T ss_pred             EEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCCCCccHHHHHHHHHHHHH
Confidence            999999865 567778899999999999999999999999999865 489999999999888889999999999999999


Q ss_pred             HHHHHHhCC-CeEEEEEecCceeCCcccc
Q 027248          172 KALAAEMAP-DTRVNCVAPGFVPTHFAEY  199 (226)
Q Consensus       172 ~~la~e~~~-~i~v~~v~Pg~v~t~~~~~  199 (226)
                      ++++.|+.+ ||+|++++||+++|++.+.
T Consensus       155 ~~l~~e~~~~gi~v~~v~pg~v~t~~~~~  183 (274)
T PRK05693        155 DALRLELAPFGVQVMEVQPGAIASQFASN  183 (274)
T ss_pred             HHHHHHhhhhCeEEEEEecCccccccccc
Confidence            999999988 9999999999999998764

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=100.00  E-value=6.8e-35  Score=223.28  Aligned_cols=188  Identities=23%  Similarity=0.365  Sum_probs=161.0

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhC-CCeE-EEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH--h
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLE-GASV-VVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK--F   87 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~-g~~v-~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~--~   87 (226)
                      .|.++||||++|||+.++|+|++. |.++ +.+.|++++..+..+......+++++++.|++++++++++++++.+-  .
T Consensus         3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~   82 (249)
T KOG1611|consen    3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGS   82 (249)
T ss_pred             CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhccc
Confidence            367999999999999999999975 5664 55666677764444444444678999999999999999999999887  4


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcC-------------CEEEEEeccCCcCC-
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKG-------------SSVVLISSIAGYQP-  153 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~-------------~~iv~~sS~~~~~~-  153 (226)
                      ..+|+||||||+........+.+.+.|.+.+++|..|+++++|+++|++++.             +.|||+||..+..+ 
T Consensus        83 ~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~~  162 (249)
T KOG1611|consen   83 DGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIGG  162 (249)
T ss_pred             CCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccccCC
Confidence            5899999999998766777888899999999999999999999999999652             26999999987643 


Q ss_pred             --CCCCchhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccc
Q 027248          154 --QSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEY  199 (226)
Q Consensus       154 --~~~~~~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~  199 (226)
                        ..++.+|.+||+|+++|+|+++.|+++ +|-|..+|||||.|+|...
T Consensus       163 ~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg~  211 (249)
T KOG1611|consen  163 FRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGGK  211 (249)
T ss_pred             CCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCCC
Confidence              245789999999999999999999999 9999999999999999863

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=4.1e-35  Score=241.87  Aligned_cols=189  Identities=29%  Similarity=0.368  Sum_probs=167.4

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQTI   84 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (226)
                      ..++.|++++|||+++|||++++++|+++|++|++.+|+.++.++.++++.+.  ..++.++++|+++.++|.++.+++.
T Consensus        30 ~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~  109 (314)
T KOG1208|consen   30 GIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFK  109 (314)
T ss_pred             cccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHH
Confidence            45678999999999999999999999999999999999999999999998864  3357789999999999999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcC--CEEEEEeccCCcCC---------
Q 027248           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKG--SSVVLISSIAGYQP---------  153 (226)
Q Consensus        85 ~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~--~~iv~~sS~~~~~~---------  153 (226)
                      ++++++|+||||||++....   ..+.|+++..+.+|++|+|.+++.++|.|++.  +|||++||..+...         
T Consensus       110 ~~~~~ldvLInNAGV~~~~~---~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~~l~~~  186 (314)
T KOG1208|consen  110 KKEGPLDVLINNAGVMAPPF---SLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLKDLSGE  186 (314)
T ss_pred             hcCCCccEEEeCcccccCCc---ccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCccchhhccch
Confidence            99999999999999986322   66778999999999999999999999999865  79999999875110         


Q ss_pred             ----CCCCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCC-ccc
Q 027248          154 ----QSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTH-FAE  198 (226)
Q Consensus       154 ----~~~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~-~~~  198 (226)
                          .....+|+.||.+...+++.|++.+..||.+++++||++.|+ +.+
T Consensus       187 ~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~l~r  236 (314)
T KOG1208|consen  187 KAKLYSSDAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTGLSR  236 (314)
T ss_pred             hccCccchhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccceec
Confidence                223335999999999999999999987999999999999999 555

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2e-34  Score=232.67  Aligned_cols=215  Identities=24%  Similarity=0.383  Sum_probs=182.0

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      ++||+++|||+++|||.++++.|+++|++|++++|++++++...+++.+.+.++..+.+|++++++++++++.+.+.+++
T Consensus         3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (253)
T PRK08217          3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQ   82 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            67999999999999999999999999999999999998888888877776778888999999999999999999888899


Q ss_pred             CCEEEEcCCCCCCC-------Ccc-ccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc---CCEEEEEeccCCcCCCCCCc
Q 027248           90 IDVVVSNAAANPSV-------DSI-LQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMA  158 (226)
Q Consensus        90 id~li~nag~~~~~-------~~~-~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~---~~~iv~~sS~~~~~~~~~~~  158 (226)
                      +|++|||||.....       ..+ .+.+.++|+.++++|+.+++++.+.+.|.|.+   +++|+++||... .+.++.+
T Consensus        83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~-~~~~~~~  161 (253)
T PRK08217         83 LNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIAR-AGNMGQT  161 (253)
T ss_pred             CCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccc-cCCCCCc
Confidence            99999999975421       111 56788999999999999999999999998843   367999988754 5677889


Q ss_pred             hhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC--chhhhhhccCCCCCchhhhccc
Q 027248          159 MYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN--DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       159 ~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      .|++||+|+++++++|+.|+.+ +|++++++||+++|++.+...+.  ..+....+..++.+|+|+|+++
T Consensus       162 ~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~  231 (253)
T PRK08217        162 NYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMKPEALERLEKMIPVGRLGEPEEIAHTV  231 (253)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCHHHHHHHHhcCCcCCCcCHHHHHHHH
Confidence            9999999999999999999987 99999999999999987654322  1122333455678999999875

>PRK12827 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-34  Score=231.35  Aligned_cols=216  Identities=27%  Similarity=0.470  Sum_probs=182.5

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecC----cchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHH
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRK----QKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTI   84 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (226)
                      ++++|+++||||+++||++++++|+++|++|++++|.    ++..+...+++...+.++.++.+|++++++++++++++.
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   82 (249)
T PRK12827          3 SLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGV   82 (249)
T ss_pred             CcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            3567999999999999999999999999999987664    344445555565556678899999999999999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHh-hhhhc--CCEEEEEeccCCcCCCCCCchhh
Q 027248           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAA-PHLQK--GSSVVLISSIAGYQPQSSMAMYG  161 (226)
Q Consensus        85 ~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~-~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~  161 (226)
                      +.++++|++|||+|... ..++.+.+.++|++++++|+.+++++++++. +.+++  .+++|++||..+..+.++...|+
T Consensus        83 ~~~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~  161 (249)
T PRK12827         83 EEFGRLDILVNNAGIAT-DAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVNYA  161 (249)
T ss_pred             HHhCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCCCCchhH
Confidence            98899999999999875 4677788899999999999999999999999 66643  36899999999988888999999


Q ss_pred             HhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       162 ~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      .+|++++.+++.++.|+.+ +|++++++||+++|++...........+..+..+..+|+++|+++
T Consensus       162 ~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~  226 (249)
T PRK12827        162 ASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPTEHLLNPVPVQRLGEPDEVAALV  226 (249)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchHHHHHhhCCCcCCcCHHHHHHHH
Confidence            9999999999999999987 999999999999999876544333333444555667899998753

>PRK06197 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.7e-35  Score=243.37  Aligned_cols=190  Identities=24%  Similarity=0.284  Sum_probs=162.8

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      .+++||+++||||++|||++++++|+++|++|++++|+.++.+...+++.+.  +.++.++.+|+++.++++++++++.+
T Consensus        12 ~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~   91 (306)
T PRK06197         12 PDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRA   91 (306)
T ss_pred             ccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHh
Confidence            4678999999999999999999999999999999999988877776666543  34678899999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcC-----------
Q 027248           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQ-----------  152 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~-----------  152 (226)
                      +++++|+||||||....   ..+.+.++++..+++|+.|++.+++.++|.|++  .++||++||..+..           
T Consensus        92 ~~~~iD~li~nAg~~~~---~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~  168 (306)
T PRK06197         92 AYPRIDLLINNAGVMYT---PKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDLQW  168 (306)
T ss_pred             hCCCCCEEEECCccccC---CCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCccccCc
Confidence            99999999999998642   234667889999999999999999999999865  47999999986542           


Q ss_pred             --CCCCCchhhHhHHHHHHHHHHHHHHhCC-CeEEE--EEecCceeCCccccc
Q 027248          153 --PQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVN--CVAPGFVPTHFAEYI  200 (226)
Q Consensus       153 --~~~~~~~Y~~sKaa~~~~~~~la~e~~~-~i~v~--~v~Pg~v~t~~~~~~  200 (226)
                        +.++...|++||+++++|++.|+.|+++ +++++  +++||+++|++.+.+
T Consensus       169 ~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~~  221 (306)
T PRK06197        169 ERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARNL  221 (306)
T ss_pred             ccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccccC
Confidence              2345678999999999999999999976 76655  457999999987754

>PRK07578 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-34  Score=226.63  Aligned_cols=181  Identities=22%  Similarity=0.318  Sum_probs=159.2

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCEE
Q 027248           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVV   93 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~l   93 (226)
                      +++||||++|||++++++|+++ ++|++++|+.+                 .+.+|+++++++++++++    ++++|+|
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-----------------~~~~D~~~~~~~~~~~~~----~~~id~l   59 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-----------------DVQVDITDPASIRALFEK----VGKVDAV   59 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-----------------ceEecCCChHHHHHHHHh----cCCCCEE
Confidence            5999999999999999999999 99999999763                 367899999999888765    4799999


Q ss_pred             EEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHhHHHHHHHHHH
Q 027248           94 VSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKA  173 (226)
Q Consensus        94 i~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~  173 (226)
                      |||||... ..++.+.+.++|++.+++|+.+++++.+++.|+|++.++|+++||..+..+.++...|++||+++++|+++
T Consensus        60 v~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~~~  138 (199)
T PRK07578         60 VSAAGKVH-FAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEPIPGGASAATVNGALEGFVKA  138 (199)
T ss_pred             EECCCCCC-CCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCCCCCchHHHHHHHHHHHHHHH
Confidence            99999765 56778889999999999999999999999999998889999999999988889999999999999999999


Q ss_pred             HHHHhCC-CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          174 LAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       174 la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      |+.|+ + ||+||+|+||+++|++...       .+.++.....+|+++|+++
T Consensus       139 la~e~-~~gi~v~~i~Pg~v~t~~~~~-------~~~~~~~~~~~~~~~a~~~  183 (199)
T PRK07578        139 AALEL-PRGIRINVVSPTVLTESLEKY-------GPFFPGFEPVPAARVALAY  183 (199)
T ss_pred             HHHHc-cCCeEEEEEcCCcccCchhhh-------hhcCCCCCCCCHHHHHHHH
Confidence            99999 6 9999999999999987421       1123344578999998754

>PRK06181 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-34  Score=232.97  Aligned_cols=213  Identities=29%  Similarity=0.455  Sum_probs=184.0

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id   91 (226)
                      +|+++||||++|||++++++|+++|++|++++|++++.+...+++...+.++.++.+|++++++++.+++++.++++++|
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   80 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID   80 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            47899999999999999999999999999999998887777777776667788899999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCccccc-cHHHHHHHHHHHHHHHHHHHHHHhhhhhc-CCEEEEEeccCCcCCCCCCchhhHhHHHHHH
Q 027248           92 VVVSNAAANPSVDSILQT-KESVLDKLWDINVKSSILLLQDAAPHLQK-GSSVVLISSIAGYQPQSSMAMYGVTKTALLG  169 (226)
Q Consensus        92 ~li~nag~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~l~~-~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~  169 (226)
                      ++|||||... ...+.+. +.+++++.+++|+.+++.+++.+.|.+.+ .+++|++||..+..+.++...|+++|+++++
T Consensus        81 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~  159 (263)
T PRK06181         81 ILVNNAGITM-WSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGVPTRSGYAASKHALHG  159 (263)
T ss_pred             EEEECCCccc-ccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCCCCccHHHHHHHHHHH
Confidence            9999999865 4566677 88999999999999999999999998854 5899999999998888899999999999999


Q ss_pred             HHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchh---hhhhccCCCCCchhhhccc
Q 027248          170 LTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGV---VSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       170 ~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~---~~~~~~~~~~~p~~~a~av  225 (226)
                      +++.++.++.+ +|+++++.||++.|++.+......+.   ........+.+|+|+|+++
T Consensus       160 ~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i  219 (263)
T PRK06181        160 FFDSLRIELADDGVAVTVVCPGFVATDIRKRALDGDGKPLGKSPMQESKIMSAEECAEAI  219 (263)
T ss_pred             HHHHHHHHhhhcCceEEEEecCccccCcchhhccccccccccccccccCCCCHHHHHHHH
Confidence            99999999987 99999999999999987654322111   1111223678999998764

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=2.6e-34  Score=231.04  Aligned_cols=212  Identities=24%  Similarity=0.339  Sum_probs=179.3

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcc-hHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCC
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK-NVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id   91 (226)
                      |+++||||+++||++++++|+++|++|++++|+.+ ..+....+....+.++.++.+|++++++++++++++.+.++++|
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id   82 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVD   82 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            78999999999999999999999999999999864 22223333333345688999999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHHHHH
Q 027248           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLG  169 (226)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~  169 (226)
                      ++|||+|... ..++.+.+.++|++++++|+.++++++++++|.+++  .++||++||..+..+.++...|+++|+++++
T Consensus        83 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~Y~~sK~a~~~  161 (245)
T PRK12824         83 ILVNNAGITR-DSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGMIG  161 (245)
T ss_pred             EEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCCCChHHHHHHHHHHH
Confidence            9999999875 466778899999999999999999999999999854  4799999999998888999999999999999


Q ss_pred             HHHHHHHHhCC-CeEEEEEecCceeCCcccccccCc--hhhhhhccCCCCCchhhhccc
Q 027248          170 LTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND--GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       170 ~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~--~~~~~~~~~~~~~p~~~a~av  225 (226)
                      |+++++.|+.+ +|++++++||+++|++.+......  .+....+...+.+|+++++++
T Consensus       162 ~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~  220 (245)
T PRK12824        162 FTKALASEGARYGITVNCIAPGYIATPMVEQMGPEVLQSIVNQIPMKRLGTPEEIAAAV  220 (245)
T ss_pred             HHHHHHHHHHHhCeEEEEEEEcccCCcchhhcCHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence            99999999988 999999999999999876543211  122333455678899988764

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=100.00  E-value=4.9e-34  Score=230.45  Aligned_cols=209  Identities=22%  Similarity=0.309  Sum_probs=175.3

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCEE
Q 027248           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVV   93 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~l   93 (226)
                      +++||||+||||.+++++|+++|++|++++|++++++....++   +.++.++.+|+++.++++++++++.+.++.+|++
T Consensus         2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~v   78 (248)
T PRK10538          2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL---GDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVL   78 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---ccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5899999999999999999999999999999988776655544   3467889999999999999999999999999999


Q ss_pred             EEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHHHHHHH
Q 027248           94 VSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLT  171 (226)
Q Consensus        94 i~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~  171 (226)
                      |||||......++.+.+.++|++++++|+.|++.+++.++|.+++  .++||++||..+..+.++...|+++|+++++++
T Consensus        79 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~~~~  158 (248)
T PRK10538         79 VNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFS  158 (248)
T ss_pred             EECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCCCCCchhHHHHHHHHHHH
Confidence            999998643456778899999999999999999999999999854  479999999998888888999999999999999


Q ss_pred             HHHHHHhCC-CeEEEEEecCceeCCccccc-c-cCc-hhhhhhccCCCCCchhhhccc
Q 027248          172 KALAAEMAP-DTRVNCVAPGFVPTHFAEYI-T-SND-GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       172 ~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~-~-~~~-~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +.++.|+.+ +|++++|+||++.|++.... . ... ............+|+|+|+++
T Consensus       159 ~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~  216 (248)
T PRK10538        159 LNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAV  216 (248)
T ss_pred             HHHHHHhcCCCcEEEEEeCCeecccccchhhccCcHHHHHhhccccCCCCHHHHHHHH
Confidence            999999988 99999999999985443221 1 111 111122233467899999874

>PRK07069 short chain dehydrogenase; Validated

Probab=100.00  E-value=3.3e-34  Score=231.35  Aligned_cols=210  Identities=28%  Similarity=0.409  Sum_probs=178.8

Q ss_pred             EEEEcCCCchhHHHHHHHHhCCCeEEEEecC-cchHHHHHHHHHhcC--CcEEEEEeeCCCHHHHHHHHHHHHHHhCCCC
Q 027248           15 AIVTASTQGIGFGIAERLGLEGASVVVSSRK-QKNVDEAVVKLKARG--IEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g~~v~~~~r~-~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id   91 (226)
                      ++||||++|||+++++.|+++|++|++++|+ .+.++...+++....  ..+..+.+|++++++++.+++++.+.++++|
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   81 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS   81 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence            7999999999999999999999999999998 666666666665442  2355688999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHHHHH
Q 027248           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLG  169 (226)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~  169 (226)
                      ++|||||... ..++.+.+.++|++++++|+.+++.+++.++|.|++  .++||++||..+..+.++...|+++|+++++
T Consensus        82 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~Y~~sK~a~~~  160 (251)
T PRK07069         82 VLVNNAGVGS-FGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAVAS  160 (251)
T ss_pred             EEEECCCcCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCCCchhHHHHHHHHH
Confidence            9999999875 467778889999999999999999999999999964  4799999999998888999999999999999


Q ss_pred             HHHHHHHHhCC---CeEEEEEecCceeCCccccccc---Cc----hhhhhhccCCCCCchhhhccc
Q 027248          170 LTKALAAEMAP---DTRVNCVAPGFVPTHFAEYITS---ND----GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       170 ~~~~la~e~~~---~i~v~~v~Pg~v~t~~~~~~~~---~~----~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ++++|+.|+.+   +|++++|+||+++|++......   ..    .+.+..+..++.+|+|+|+++
T Consensus       161 ~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~  226 (251)
T PRK07069        161 LTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPDDVAHAV  226 (251)
T ss_pred             HHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCCCCCCcCHHHHHHHH
Confidence            99999999865   4999999999999998754321   11    122334456778999998764

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2e-34  Score=230.57  Aligned_cols=202  Identities=22%  Similarity=0.307  Sum_probs=169.0

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      +++||+++||||++|||++++++|+++|++|++++|+....         ...++..+.+|++++      ++++.+.++
T Consensus         2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~---------~~~~~~~~~~D~~~~------~~~~~~~~~   66 (235)
T PRK06550          2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD---------LSGNFHFLQLDLSDD------LEPLFDWVP   66 (235)
T ss_pred             CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc---------cCCcEEEEECChHHH------HHHHHHhhC
Confidence            36789999999999999999999999999999999986431         123577889999887      455556678


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa  166 (226)
                      ++|++|||||......++.+.+.++|++++++|+.++++++++++|.+++  .++||++||..+..+.++...|+.+|++
T Consensus        67 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  146 (235)
T PRK06550         67 SVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGGGAAYTASKHA  146 (235)
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcccHHHHHH
Confidence            99999999997643456778889999999999999999999999998854  4799999999998888899999999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch----hhhhhccCCCCCchhhhccc
Q 027248          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG----VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       167 ~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~----~~~~~~~~~~~~p~~~a~av  225 (226)
                      +++++++++.|+.+ ||++++++||+++|++......+..    .....+..++.+|+|+|+++
T Consensus       147 ~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~  210 (235)
T PRK06550        147 LAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEPGGLADWVARETPIKRWAEPEEVAELT  210 (235)
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCchHHHHHHhccCCcCCCCCHHHHHHHH
Confidence            99999999999988 9999999999999998654332222    22334556688999999864

>PRK06101 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-34  Score=231.11  Aligned_cols=197  Identities=21%  Similarity=0.303  Sum_probs=166.5

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCE
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~   92 (226)
                      |+++||||++|||++++++|+++|++|++++|+++++++..+    ...++.++.+|+++.++++++++++..   .+|.
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~---~~d~   74 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHT----QSANIFTLAFDVTDHPGTKAALSQLPF---IPEL   74 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH----hcCCCeEEEeeCCCHHHHHHHHHhccc---CCCE
Confidence            789999999999999999999999999999999776554433    234677899999999999999887642   5899


Q ss_pred             EEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHhHHHHHHHHH
Q 027248           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTK  172 (226)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~  172 (226)
                      +|||||... ..+..+.+.++|++++++|+.|++++++++.|+|+++++||++||..+..+.++...|++||++++++++
T Consensus        75 ~i~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~  153 (240)
T PRK06101         75 WIFNAGDCE-YMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELALPRAEAYGASKAAVAYFAR  153 (240)
T ss_pred             EEEcCcccc-cCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccCCCCCchhhHHHHHHHHHHH
Confidence            999999653 2344567889999999999999999999999999877899999999998888999999999999999999


Q ss_pred             HHHHHhCC-CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          173 ALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       173 ~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      .|+.|+.+ ||++++++||+++|++.+....        ......+|+++|..+
T Consensus       154 ~l~~e~~~~gi~v~~v~pg~i~t~~~~~~~~--------~~~~~~~~~~~a~~i  199 (240)
T PRK06101        154 TLQLDLRPKGIEVVTVFPGFVATPLTDKNTF--------AMPMIITVEQASQEI  199 (240)
T ss_pred             HHHHHHHhcCceEEEEeCCcCCCCCcCCCCC--------CCCcccCHHHHHHHH
Confidence            99999987 9999999999999998654211        112346788877653

>PRK06914 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.6e-34  Score=234.37  Aligned_cols=187  Identities=24%  Similarity=0.326  Sum_probs=168.5

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcC--CcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG--IEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      ++|+++||||+|+||++++++|+++|++|++++|+.+..+...+++...+  .++.++.+|++++++++. ++++.+.++
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~   80 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIG   80 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcC
Confidence            46899999999999999999999999999999999888777766665433  468889999999999999 999988899


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa  166 (226)
                      ++|++|||||... .....+.+.+++++.+++|+.+++.+++.++|.|++  .++||++||..+..+.++...|++||++
T Consensus        81 ~id~vv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~~  159 (280)
T PRK06914         81 RIDLLVNNAGYAN-GGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPGLSPYVSSKYA  159 (280)
T ss_pred             CeeEEEECCcccc-cCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCCCCchhHHhHHH
Confidence            9999999999875 456778889999999999999999999999999854  4789999999888888999999999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCceeCCcccc
Q 027248          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEY  199 (226)
Q Consensus       167 ~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~  199 (226)
                      +++|+++++.|+.+ ||++++++||+++|++...
T Consensus       160 ~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~  193 (280)
T PRK06914        160 LEGFSESLRLELKPFGIDVALIEPGSYNTNIWEV  193 (280)
T ss_pred             HHHHHHHHHHHhhhhCCEEEEEecCCcccchhhc
Confidence            99999999999988 9999999999999997653

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=100.00  E-value=7.1e-34  Score=228.10  Aligned_cols=212  Identities=25%  Similarity=0.370  Sum_probs=181.2

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEec-CcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCC
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSR-KQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id   91 (226)
                      |+++||||++|||++++++|+++|++|+++.| +++..+....++...+.++.++.+|++++++++++++.+.+.++++|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID   80 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence            68999999999999999999999999999888 55555555555555566788999999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHHHHH
Q 027248           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLG  169 (226)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~  169 (226)
                      +||||+|... ...+.+.+.++|++.+++|+.+++.++++++|.|++  .++||++||..+..+.++...|+++|++++.
T Consensus        81 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sk~a~~~  159 (242)
T TIGR01829        81 VLVNNAGITR-DATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGMIG  159 (242)
T ss_pred             EEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCcchhHHHHHHHHH
Confidence            9999999865 456778889999999999999999999999999965  3689999999988888999999999999999


Q ss_pred             HHHHHHHHhCC-CeEEEEEecCceeCCcccccccC--chhhhhhccCCCCCchhhhccc
Q 027248          170 LTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN--DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       170 ~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      |++.++.|+.+ +|+++++.||+++|++.....+.  ..+....+..++.+|+++|.++
T Consensus       160 ~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~  218 (242)
T TIGR01829       160 FTKALAQEGATKGVTVNTISPGYIATDMVMAMREDVLNSIVAQIPVGRLGRPEEIAAAV  218 (242)
T ss_pred             HHHHHHHHhhhhCeEEEEEeeCCCcCccccccchHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            99999999987 99999999999999987654321  1122334556788999988754

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=8.1e-34  Score=228.89  Aligned_cols=211  Identities=26%  Similarity=0.378  Sum_probs=182.2

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcC-CcEEEEEeeCC--CHHHHHHHHHHHHH
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG-IEVIGVVCHVS--NGQQRKNLINQTIE   85 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~--~~~~v~~~~~~~~~   85 (226)
                      .+++|+++||||+++||.+++++|++.|++|++++|+.++.+...+++.+.+ .++.++.+|++  ++++++++++.+.+
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   88 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE   88 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999988877777776544 35667777875  78999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHh
Q 027248           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVT  163 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~s  163 (226)
                      .++++|+||||||......++.+.+.++|++.+++|+.++++++++++|+|++  .++||++||..+..+.++...|++|
T Consensus        89 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s  168 (247)
T PRK08945         89 QFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRANWGAYAVS  168 (247)
T ss_pred             HhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCCCCcccHHH
Confidence            99999999999998654567778889999999999999999999999999854  4799999999988888899999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       164 Kaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      |++++.++++++.++.. +|++++++||+++|++........      ...++.+|+++++.+
T Consensus       169 K~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~~~~~------~~~~~~~~~~~~~~~  225 (247)
T PRK08945        169 KFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAFPGE------DPQKLKTPEDIMPLY  225 (247)
T ss_pred             HHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhhcCcc------cccCCCCHHHHHHHH
Confidence            99999999999999988 999999999999999765443222      123578899988764

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=6.4e-34  Score=228.89  Aligned_cols=215  Identities=36%  Similarity=0.530  Sum_probs=185.8

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEE-ecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      ++.+|+++||||+++||.+++++|+++|++|+++ +|++++.+...+.+...+.++.++.+|++++++++++++.+.+.+
T Consensus         2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (247)
T PRK05565          2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKF   81 (247)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            3567999999999999999999999999999998 999888777777776666678899999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHH
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKT  165 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKa  165 (226)
                      +.+|++|||+|... ..++.+.+.++|++++++|+.+++++.+.+.|.+.+  .+++|++||..+..+.+....|+.+|+
T Consensus        82 ~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK~  160 (247)
T PRK05565         82 GKIDILVNNAGISN-FGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYSASKG  160 (247)
T ss_pred             CCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCCccHHHHHHH
Confidence            99999999999874 567778899999999999999999999999999854  468999999998888888999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCc--hhhhhhccCCCCCchhhhcc
Q 027248          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND--GVVSSVSSLKLSPPSSLTLA  224 (226)
Q Consensus       166 a~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~--~~~~~~~~~~~~~p~~~a~a  224 (226)
                      +++.+++.++.++.+ ||++++++||+++|++.+......  .........+..+|+++|++
T Consensus       161 a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~  222 (247)
T PRK05565        161 AVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSEEDKEGLAEEIPLGRLGKPEEIAKV  222 (247)
T ss_pred             HHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccChHHHHHHHhcCCCCCCCCHHHHHHH
Confidence            999999999999977 999999999999999876644221  11122344567788998865

>PRK07201 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-34  Score=260.33  Aligned_cols=209  Identities=21%  Similarity=0.313  Sum_probs=181.4

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      +++||+++||||++|||++++++|+++|++|++++|+++.+++..+++...+.++.++.+|+++.++++++++++.+.++
T Consensus       368 ~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g  447 (657)
T PRK07201        368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHG  447 (657)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            57799999999999999999999999999999999999988888888877777889999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCccccc--cHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhH
Q 027248           89 KIDVVVSNAAANPSVDSILQT--KESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTK  164 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~--~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sK  164 (226)
                      ++|++|||||... ...+.+.  ..+++++++++|+.|++.+++.++|.|++  .++||++||.++..+.++.+.|++||
T Consensus       448 ~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  526 (657)
T PRK07201        448 HVDYLVNNAGRSI-RRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPRFSAYVASK  526 (657)
T ss_pred             CCCEEEECCCCCC-CCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCcchHHHHH
Confidence            9999999999764 2233222  25789999999999999999999999864  47999999999998889999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       165 aa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +++++|+++++.|+.+ ||+|++|+||+++|++......       .......+|+++|+.+
T Consensus       527 ~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~~~-------~~~~~~~~~~~~a~~i  581 (657)
T PRK07201        527 AALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPTKR-------YNNVPTISPEEAADMV  581 (657)
T ss_pred             HHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcccc-------ccCCCCCCHHHHHHHH
Confidence            9999999999999988 9999999999999998653211       1123457788877653

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=100.00  E-value=4.4e-34  Score=259.08  Aligned_cols=223  Identities=23%  Similarity=0.287  Sum_probs=187.4

Q ss_pred             cccccccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHH
Q 027248            2 EKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNL   79 (226)
Q Consensus         2 ~~~~~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~   79 (226)
                      ++|.....++||+++||||++|||++++++|+++|++|++++|+.+.++...+++...  ...+..+.+|++++++++++
T Consensus       404 ~~~~~~~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a  483 (676)
T TIGR02632       404 RRMPKEKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAA  483 (676)
T ss_pred             ccCCCCcCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHH
Confidence            3455556788999999999999999999999999999999999988877777766543  23577899999999999999


Q ss_pred             HHHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc---CCEEEEEeccCCcCCCCC
Q 027248           80 INQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSS  156 (226)
Q Consensus        80 ~~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~---~~~iv~~sS~~~~~~~~~  156 (226)
                      ++++.+.+|++|+||||||... ..++.+.+.++|+..+++|+.+++.+++.+++.|++   +++||++||..+..+.++
T Consensus       484 ~~~i~~~~g~iDilV~nAG~~~-~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~  562 (676)
T TIGR02632       484 FADVALAYGGVDIVVNNAGIAT-SSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKN  562 (676)
T ss_pred             HHHHHHhcCCCcEEEECCCCCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCC
Confidence            9999999999999999999865 467778889999999999999999999999999864   368999999999888899


Q ss_pred             CchhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCC--ccccccc----------C----chhhhhhccCCCCCch
Q 027248          157 MAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTH--FAEYITS----------N----DGVVSSVSSLKLSPPS  219 (226)
Q Consensus       157 ~~~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~--~~~~~~~----------~----~~~~~~~~~~~~~~p~  219 (226)
                      ...|++||++++++++.++.|+.+ ||+||+|+||.+.|+  ++..-+.          .    ..+....+..+...|+
T Consensus       563 ~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~r~v~pe  642 (676)
T TIGR02632       563 ASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLKRHIFPA  642 (676)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhcCCcCCCcCHH
Confidence            999999999999999999999988 999999999999653  3221110          1    1122333445678999


Q ss_pred             hhhccc
Q 027248          220 SLTLAV  225 (226)
Q Consensus       220 ~~a~av  225 (226)
                      |+|+++
T Consensus       643 DVA~av  648 (676)
T TIGR02632       643 DIAEAV  648 (676)
T ss_pred             HHHHHH
Confidence            999875

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=7.2e-34  Score=230.09  Aligned_cols=214  Identities=25%  Similarity=0.396  Sum_probs=178.8

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCc-chHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ-KNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      .|+++||||+++||++++++|+++|++|++++|+. +..+...+.+...+.++.++.+|++++++++++++++.+.++++
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI   81 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            38899999999999999999999999999999875 34455555665556678899999999999999999999999999


Q ss_pred             CEEEEcCCCCCC-CCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--------CCEEEEEeccCCcCCCCCCchhh
Q 027248           91 DVVVSNAAANPS-VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--------GSSVVLISSIAGYQPQSSMAMYG  161 (226)
Q Consensus        91 d~li~nag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--------~~~iv~~sS~~~~~~~~~~~~Y~  161 (226)
                      |++|||||.... ..++.+.+.++|++++++|+.+++++++++.+.|++        .++||++||..+..+.++.+.|+
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~  161 (256)
T PRK12745         82 DCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEYC  161 (256)
T ss_pred             CEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCCCcccH
Confidence            999999997532 346778889999999999999999999999999853        24699999999988888899999


Q ss_pred             HhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch--h-hhhhccCCCCCchhhhccc
Q 027248          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG--V-VSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       162 ~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~--~-~~~~~~~~~~~p~~~a~av  225 (226)
                      .||++++++++.++.|+.+ ||++++++||+++|++.........  + ....+..++.+|+|+|+++
T Consensus       162 ~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~i  229 (256)
T PRK12745        162 ISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTAKYDALIAKGLVPMPRWGEPEDVARAV  229 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccchhHHhhhhhcCCCcCCCcCHHHHHHHH
Confidence            9999999999999999987 9999999999999998654321110  1 1123344577899988764

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=100.00  E-value=1.2e-33  Score=228.33  Aligned_cols=192  Identities=38%  Similarity=0.566  Sum_probs=166.6

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcch--HHHHHHHHHhcC-CcEEEEEeeCCC-HHHHHHHHHHHH
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN--VDEAVVKLKARG-IEVIGVVCHVSN-GQQRKNLINQTI   84 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~--~~~~~~~~~~~~-~~~~~~~~Dv~~-~~~v~~~~~~~~   84 (226)
                      .+.+|+++||||++|||+++++.|+++|++|+++.|+.+.  .+...+.....+ ....+..+|+++ .++++.+++++.
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~   81 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAE   81 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHH
Confidence            3568999999999999999999999999999988888765  333333333222 257788899998 999999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCC-chhhHh
Q 027248           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSM-AMYGVT  163 (226)
Q Consensus        85 ~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~-~~Y~~s  163 (226)
                      +.+|++|++|||||......++.+.+.++|++++++|+.+++.+++.+.|.+++. +||++||..+. +.++. .+|++|
T Consensus        82 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~Iv~isS~~~~-~~~~~~~~Y~~s  159 (251)
T COG1028          82 EEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQ-RIVNISSVAGL-GGPPGQAAYAAS  159 (251)
T ss_pred             HHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhC-eEEEECCchhc-CCCCCcchHHHH
Confidence            9999999999999987522478899999999999999999999999888888766 99999999998 77774 999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCccccccc
Q 027248          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS  202 (226)
Q Consensus       164 Kaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~  202 (226)
                      |+|+++|++.++.|+.+ ||++++|+||+++|++......
T Consensus       160 K~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~~~~~~~  199 (251)
T COG1028         160 KAALIGLTKALALELAPRGIRVNAVAPGYIDTPMTAALES  199 (251)
T ss_pred             HHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcchhhhhh
Confidence            99999999999999988 9999999999999998876443

>PRK07775 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-33  Score=231.14  Aligned_cols=216  Identities=21%  Similarity=0.307  Sum_probs=182.7

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      +...|+++||||+++||++++++|+++|++|++++|+.+.++....++...+.++.++.+|++++++++++++++.+.++
T Consensus         7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   86 (274)
T PRK07775          7 HPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALG   86 (274)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            35678999999999999999999999999999999998877777666666667788899999999999999999999899


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa  166 (226)
                      ++|++|||||... .....+.+.++|++.+++|+.++++++++++|.+.+  .++||++||..+..+.++...|+.+|++
T Consensus        87 ~id~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  165 (274)
T PRK07775         87 EIEVLVSGAGDTY-FGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRPHMGAYGAAKAG  165 (274)
T ss_pred             CCCEEEECCCcCC-CcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCcchHHHHHHH
Confidence            9999999999865 456677888999999999999999999999998854  4789999999988888888999999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCc--hhhh------hhccCCCCCchhhhccc
Q 027248          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND--GVVS------SVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       167 ~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~--~~~~------~~~~~~~~~p~~~a~av  225 (226)
                      ++++++.++.++.+ ||++++++||+++|++........  .+..      ......+..|+|+|+++
T Consensus       166 ~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~  233 (274)
T PRK07775        166 LEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKWGQARHDYFLRASDLARAI  233 (274)
T ss_pred             HHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHhcccccccccCHHHHHHHH
Confidence            99999999999987 999999999999998754322110  0001      11124578899998874

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=100.00  E-value=1e-33  Score=228.29  Aligned_cols=215  Identities=31%  Similarity=0.492  Sum_probs=186.7

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      +++|+++||||+++||++++++|+++|++|++++|+.++.....+++.+.+.++.++.+|++++++++++++++.+++++
T Consensus         4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (251)
T PRK12826          4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGR   83 (251)
T ss_pred             CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            46799999999999999999999999999999999988888877777776777889999999999999999999999999


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCc-CCCCCCchhhHhHHH
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGY-QPQSSMAMYGVTKTA  166 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~-~~~~~~~~Y~~sKaa  166 (226)
                      +|++|||+|... ..++.+.+.+++++.+++|+.+++.+.+.++|.+++  .+++|++||..+. .+.++...|+.+|++
T Consensus        84 ~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~~y~~sK~a  162 (251)
T PRK12826         84 LDILVANAGIFP-LTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGYPGLAHYAASKAG  162 (251)
T ss_pred             CCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCCCCccHHHHHHHH
Confidence            999999999876 466777889999999999999999999999998854  4789999999988 778889999999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC---chhhhhhccCCCCCchhhhccc
Q 027248          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN---DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       167 ~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~---~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ++++++.++.++.+ +++++.+.||++.|++.......   ..+....+...+..++|+|+++
T Consensus       163 ~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  225 (251)
T PRK12826        163 LVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQWAEAIAAAIPLGRLGEPEDIAAAV  225 (251)
T ss_pred             HHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            99999999999977 99999999999999976554321   1222333445678899988763

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=8.2e-35  Score=220.73  Aligned_cols=184  Identities=21%  Similarity=0.323  Sum_probs=168.0

Q ss_pred             CCCEEEEEcCC-CchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH-HhC
Q 027248           11 QGKVAIVTAST-QGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE-KFG   88 (226)
Q Consensus        11 ~gk~vlItGa~-~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~-~~~   88 (226)
                      +.|.++|||++ ||||.+++++|.+.|+.|+.++|+-+.-..+..+.     .+.....|+++++++.++..++++ .+|
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~-----gl~~~kLDV~~~~~V~~v~~evr~~~~G   80 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQF-----GLKPYKLDVSKPEEVVTVSGEVRANPDG   80 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhh-----CCeeEEeccCChHHHHHHHHHHhhCCCC
Confidence            45899999986 99999999999999999999999988776665444     266789999999999999999999 679


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhh-hcCCEEEEEeccCCcCCCCCCchhhHhHHHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHL-QKGSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l-~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~  167 (226)
                      ++|+|+||||..- ..+..+.+.++.+++|++|++|.++.++++...+ +++|.|||+.|..+..|.|..+.|++||||+
T Consensus        81 kld~L~NNAG~~C-~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfpf~~iYsAsKAAi  159 (289)
T KOG1209|consen   81 KLDLLYNNAGQSC-TFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFPFGSIYSASKAAI  159 (289)
T ss_pred             ceEEEEcCCCCCc-ccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccchhhhhhHHHHHH
Confidence            9999999999876 5678899999999999999999999999999655 6689999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCC-CeEEEEEecCceeCCccccc
Q 027248          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYI  200 (226)
Q Consensus       168 ~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~  200 (226)
                      +.|+++|+.|++| ||+|..+.||.|.|++...-
T Consensus       160 hay~~tLrlEl~PFgv~Vin~itGGv~T~Ia~k~  193 (289)
T KOG1209|consen  160 HAYARTLRLELKPFGVRVINAITGGVATDIADKR  193 (289)
T ss_pred             HHhhhhcEEeeeccccEEEEecccceecccccCC
Confidence            9999999999999 99999999999999987663

>PRK07060 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-33  Score=227.71  Aligned_cols=212  Identities=24%  Similarity=0.328  Sum_probs=177.7

Q ss_pred             cccccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHH
Q 027248            4 MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQT   83 (226)
Q Consensus         4 ~~~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   83 (226)
                      |.++.++++|+++||||+++||+++++.|+++|++|++++|+.++.+...++.     .+.++.+|+++.++++++++. 
T Consensus         1 ~~~~~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~-   74 (245)
T PRK07060          1 MNMAFDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET-----GCEPLRLDVGDDAAIRAALAA-   74 (245)
T ss_pred             CCcccccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCeEEEecCCCHHHHHHHHHH-
Confidence            44566788999999999999999999999999999999999987665544433     245688999999988777664 


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcC---CEEEEEeccCCcCCCCCCchh
Q 027248           84 IEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKG---SSVVLISSIAGYQPQSSMAMY  160 (226)
Q Consensus        84 ~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~---~~iv~~sS~~~~~~~~~~~~Y  160 (226)
                         .+++|++|||||... ..+..+.+.++|++.+++|+.+++.+++++.+.+++.   ++||++||..+..+.++...|
T Consensus        75 ---~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y  150 (245)
T PRK07060         75 ---AGAFDGLVNCAGIAS-LESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDHLAY  150 (245)
T ss_pred             ---hCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCCCcHh
Confidence               578999999999865 4566678889999999999999999999999988542   699999999988888899999


Q ss_pred             hHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch----hhhhhccCCCCCchhhhccc
Q 027248          161 GVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG----VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       161 ~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~----~~~~~~~~~~~~p~~~a~av  225 (226)
                      ++||++++.+++.++.++.+ +|++++++||+++|++.+..+....    +....+..++.+|+|+|+++
T Consensus       151 ~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~  220 (245)
T PRK07060        151 CASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAIPLGRFAEVDDVAAPI  220 (245)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence            99999999999999999987 9999999999999998654333221    22334556789999999875

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=100.00  E-value=8.5e-34  Score=215.52  Aligned_cols=163  Identities=34%  Similarity=0.563  Sum_probs=154.4

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecC--cchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRK--QKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~--~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      |+++||||++|||++++++|+++|. +|++++|+  .+..++..+++...+.++.++++|++++++++.+++++.+++++
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            7899999999999999999999965 68899998  67788888888888889999999999999999999999999999


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHhHHHHHH
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLG  169 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~  169 (226)
                      +|++|||+|... ..++.+.+.++|++++++|+.+++++.++++|  +++++||++||..+..+.|++..|++||+|+++
T Consensus        81 ld~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~--~~~g~iv~~sS~~~~~~~~~~~~Y~askaal~~  157 (167)
T PF00106_consen   81 LDILINNAGIFS-DGSLDDLSEEELERVFRVNLFGPFLLAKALLP--QGGGKIVNISSIAGVRGSPGMSAYSASKAALRG  157 (167)
T ss_dssp             ESEEEEECSCTT-SBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH--HTTEEEEEEEEGGGTSSSTTBHHHHHHHHHHHH
T ss_pred             cccccccccccc-ccccccccchhhhhccccccceeeeeeehhee--ccccceEEecchhhccCCCCChhHHHHHHHHHH
Confidence            999999999987 78899999999999999999999999999999  778999999999999999999999999999999


Q ss_pred             HHHHHHHHh
Q 027248          170 LTKALAAEM  178 (226)
Q Consensus       170 ~~~~la~e~  178 (226)
                      |+++|+.|+
T Consensus       158 ~~~~la~e~  166 (167)
T PF00106_consen  158 LTQSLAAEL  166 (167)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHhc
Confidence            999999996

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=100.00  E-value=1.5e-33  Score=235.98  Aligned_cols=191  Identities=16%  Similarity=0.146  Sum_probs=162.4

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      +..+|+++||||++|||++++++|+++|++|++++|+.++.+...+++...+.++.++.+|+++.++++.+++++.+.++
T Consensus         3 ~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   82 (322)
T PRK07453          3 QDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGK   82 (322)
T ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            34689999999999999999999999999999999999888887777754455788899999999999999999877778


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcC----CEEEEEeccCCcC------------
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKG----SSVVLISSIAGYQ------------  152 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~----~~iv~~sS~~~~~------------  152 (226)
                      ++|+||||||+........+.+.++|+.++++|+.|+++++++++|.|++.    ++||++||.....            
T Consensus        83 ~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~  162 (322)
T PRK07453         83 PLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAP  162 (322)
T ss_pred             CccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCCc
Confidence            999999999986422233466889999999999999999999999999653    5999999975421            


Q ss_pred             -----------------------CCCCCchhhHhHHHHHHHHHHHHHHhC-C-CeEEEEEecCce-eCCcccc
Q 027248          153 -----------------------PQSSMAMYGVTKTALLGLTKALAAEMA-P-DTRVNCVAPGFV-PTHFAEY  199 (226)
Q Consensus       153 -----------------------~~~~~~~Y~~sKaa~~~~~~~la~e~~-~-~i~v~~v~Pg~v-~t~~~~~  199 (226)
                                             +..+..+|+.||++...+++.|++++. . ||++++++||+| .|++.+.
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~  235 (322)
T PRK07453        163 ADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTPLFRN  235 (322)
T ss_pred             cchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCccccc
Confidence                                   112356899999999999999999994 3 899999999999 5887654

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=100.00  E-value=2e-33  Score=226.18  Aligned_cols=213  Identities=23%  Similarity=0.299  Sum_probs=178.2

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEE-EecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCC
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVV-SSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id   91 (226)
                      |+++||||+++||++++++|+++|++|++ ..|++++.++...++...+.++..+.+|++++++++++++++.+.++++|
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id   81 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA   81 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence            68999999999999999999999999876 46777777777777766666788899999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc-----CCEEEEEeccCCcCCCCC-CchhhHhHH
Q 027248           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-----GSSVVLISSIAGYQPQSS-MAMYGVTKT  165 (226)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~-----~~~iv~~sS~~~~~~~~~-~~~Y~~sKa  165 (226)
                      ++|||+|......++.+.+.++|+.++++|+.+++.+++++++.+.+     ++++|++||..+..+.++ ...|+++|+
T Consensus        82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~~~~~Y~~sK~  161 (247)
T PRK09730         82 ALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASKG  161 (247)
T ss_pred             EEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCCcccchHhHHH
Confidence            99999998654567788899999999999999999999999998843     368999999988777765 468999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch---hhhhhccCCCCCchhhhccc
Q 027248          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG---VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       166 a~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~---~~~~~~~~~~~~p~~~a~av  225 (226)
                      +++.+++.++.|+.+ +|++++++||+++||+.........   .....+..+..+|+++|+++
T Consensus       162 ~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  225 (247)
T PRK09730        162 AIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQRGGQPEEVAQAI  225 (247)
T ss_pred             HHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            999999999999987 9999999999999997543322111   11222334556889988764

>PRK07102 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-33  Score=225.63  Aligned_cols=201  Identities=20%  Similarity=0.277  Sum_probs=174.0

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhc-CCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCC
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id   91 (226)
                      |+++||||++|||++++++|+++|++|++++|++++.+...+++... +.++.++.+|++++++++++++++.+   .+|
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~---~~d   78 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPA---LPD   78 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhh---cCC
Confidence            68999999999999999999999999999999998877776666543 44788999999999999999888754   579


Q ss_pred             EEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHHHHH
Q 027248           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLG  169 (226)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~  169 (226)
                      ++|||+|... .....+.+.+++.+.+++|+.+++++.+++.|.|.+  .+++|++||..+..+.++...|+++|+++++
T Consensus        79 ~vv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  157 (243)
T PRK07102         79 IVLIAVGTLG-DQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRASNYVYGSAKAALTA  157 (243)
T ss_pred             EEEECCcCCC-CcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCCCCcccHHHHHHHHH
Confidence            9999999865 456778889999999999999999999999999864  5799999999988888889999999999999


Q ss_pred             HHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          170 LTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       170 ~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ++++++.|+.+ ||++++|+||+++|++.....        .+.....+|+++|+++
T Consensus       158 ~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~~--------~~~~~~~~~~~~a~~i  206 (243)
T PRK07102        158 FLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGLK--------LPGPLTAQPEEVAKDI  206 (243)
T ss_pred             HHHHHHHHhhccCcEEEEEecCcccChhhhccC--------CCccccCCHHHHHHHH
Confidence            99999999988 999999999999999765432        1223467788888754

>PRK06924 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.5e-34  Score=229.44  Aligned_cols=210  Identities=20%  Similarity=0.273  Sum_probs=173.5

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcc-hHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC--
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK-NVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK--   89 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~--   89 (226)
                      |+++||||++|||++++++|+++|++|++++|++. .++...   ...+.++.++.+|++++++++++++++.+.++.  
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~   78 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLA---EQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDN   78 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHH---hccCCceEEEEecCCCHHHHHHHHHHHHHhcCccc
Confidence            68999999999999999999999999999999873 332222   222456788999999999999999998877653  


Q ss_pred             CC--EEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc---CCEEEEEeccCCcCCCCCCchhhHhH
Q 027248           90 ID--VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTK  164 (226)
Q Consensus        90 id--~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~---~~~iv~~sS~~~~~~~~~~~~Y~~sK  164 (226)
                      ++  ++|+|||......++.+.+.++|.+.+++|+.+++.+++.++|.+++   .++||++||..+..+.++...|+++|
T Consensus        79 ~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  158 (251)
T PRK06924         79 VSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFGWSAYCSSK  158 (251)
T ss_pred             CCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCCCcHHHhHHH
Confidence            22  89999998654567888999999999999999999999999999865   36899999999998999999999999


Q ss_pred             HHHHHHHHHHHHHhC--C-CeEEEEEecCceeCCccccccc--Cc------hhhhhhccCCCCCchhhhccc
Q 027248          165 TALLGLTKALAAEMA--P-DTRVNCVAPGFVPTHFAEYITS--ND------GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       165 aa~~~~~~~la~e~~--~-~i~v~~v~Pg~v~t~~~~~~~~--~~------~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +|++++++.|+.|++  + +|+|++|+||+++|++......  ..      .+....+..++.+|+++|+++
T Consensus       159 aa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  230 (251)
T PRK06924        159 AGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLKEEGKLLSPEYVAKAL  230 (251)
T ss_pred             HHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHhhcCCcCCHHHHHHHH
Confidence            999999999999975  3 8999999999999998654321  11      122233456789999998864

>PRK06482 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.6e-33  Score=228.06  Aligned_cols=185  Identities=27%  Similarity=0.447  Sum_probs=165.6

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id   91 (226)
                      .|+++||||+|+||++++++|+++|++|++++|+++.++...++.   +.++.++.+|+++.++++++++++.+.++++|
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   78 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY---GDRLWVLQLDVTDSAAVRAVVDRAFAALGRID   78 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---cCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            378999999999999999999999999999999987666554433   34678899999999999999999999899999


Q ss_pred             EEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHHHHH
Q 027248           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLG  169 (226)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~  169 (226)
                      +||||||... ..+..+.+.++|++.+++|+.++++++++++|+|++  .++||++||..+..+.|+.+.|++||+++++
T Consensus        79 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  157 (276)
T PRK06482         79 VVVSNAGYGL-FGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKWGIEG  157 (276)
T ss_pred             EEEECCCCCC-CcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCCCCCchhHHHHHHHHH
Confidence            9999999876 466777888999999999999999999999999854  4699999999988888899999999999999


Q ss_pred             HHHHHHHHhCC-CeEEEEEecCceeCCccccc
Q 027248          170 LTKALAAEMAP-DTRVNCVAPGFVPTHFAEYI  200 (226)
Q Consensus       170 ~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~  200 (226)
                      |+++++.++.+ ||+++.++||.+.|++....
T Consensus       158 ~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~  189 (276)
T PRK06482        158 FVEAVAQEVAPFGIEFTIVEPGPARTNFGAGL  189 (276)
T ss_pred             HHHHHHHHhhccCcEEEEEeCCccccCCcccc
Confidence            99999999988 99999999999999986543

>PRK07806 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.8e-34  Score=228.38  Aligned_cols=209  Identities=24%  Similarity=0.292  Sum_probs=170.6

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcc-hHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK-NVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      ++||+++||||++|||++++++|+++|++|++++|+.+ ..+....++...+.++.++.+|++++++++++++++.+.++
T Consensus         4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (248)
T PRK07806          4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFG   83 (248)
T ss_pred             CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            56899999999999999999999999999999999764 45555666665566788899999999999999999999889


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCc-----CCCCCCchhhHh
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY-----QPQSSMAMYGVT  163 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~-----~~~~~~~~Y~~s  163 (226)
                      .+|++|||||... ..   .   .++...+++|+.+++++++++.|+|.++++||++||..+.     .+.+.+..|++|
T Consensus        84 ~~d~vi~~ag~~~-~~---~---~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~~~~Y~~s  156 (248)
T PRK07806         84 GLDALVLNASGGM-ES---G---MDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPTVKTMPEYEPVARS  156 (248)
T ss_pred             CCcEEEECCCCCC-CC---C---CCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCccccCCccccHHHHH
Confidence            9999999998643 11   1   1356788999999999999999999777899999996543     234557789999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC--chh--hhhhccCCCCCchhhhccc
Q 027248          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN--DGV--VSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       164 Kaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~--~~~--~~~~~~~~~~~p~~~a~av  225 (226)
                      |++++.+++.++.|+++ +|+|+++.||+++|++...+...  .+.  ....+.+++..|+|+|+++
T Consensus       157 K~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  223 (248)
T PRK07806        157 KRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRLNPGAIEARREAAGKLYTVSEFAAEV  223 (248)
T ss_pred             HHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccCCHHHHHHHHhhhcccCCHHHHHHHH
Confidence            99999999999999988 99999999999999876543211  111  2234556889999999875

>PRK12829 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.1e-33  Score=225.53  Aligned_cols=219  Identities=25%  Similarity=0.404  Sum_probs=183.3

Q ss_pred             ccccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHH
Q 027248            5 KMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTI   84 (226)
Q Consensus         5 ~~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (226)
                      +|..++++|+++||||+|+||++++++|+++|++|++++|+++..+...++..+.  ++.++.+|++++++++.+++++.
T Consensus         4 ~~~~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~   81 (264)
T PRK12829          4 DLLKPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGA--KVTATVADVADPAQVERVFDTAV   81 (264)
T ss_pred             hHhhccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcC--ceEEEEccCCCHHHHHHHHHHHH
Confidence            3455688999999999999999999999999999999999987776665554322  56888999999999999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcC---CEEEEEeccCCcCCCCCCchhh
Q 027248           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKG---SSVVLISSIAGYQPQSSMAMYG  161 (226)
Q Consensus        85 ~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~---~~iv~~sS~~~~~~~~~~~~Y~  161 (226)
                      +.++++|+|||++|...........+.++|++++++|+.+++.+++.+++.+++.   ++|+++||..+..+.++...|+
T Consensus        82 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~~~~y~  161 (264)
T PRK12829         82 ERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYA  161 (264)
T ss_pred             HHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCCCchhH
Confidence            9999999999999987435667778889999999999999999999999987542   5799999988888888899999


Q ss_pred             HhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC-------------chhhhhhccCCCCCchhhhccc
Q 027248          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN-------------DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       162 ~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~-------------~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      .+|++++++++.++.++.. +++++++.||+++|++.+.....             ..+....+..++..|+++|+++
T Consensus       162 ~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~  239 (264)
T PRK12829        162 ASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEPEDIAATA  239 (264)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence            9999999999999999976 99999999999999987544321             1112223344678899988764

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=100.00  E-value=1e-33  Score=227.02  Aligned_cols=188  Identities=27%  Similarity=0.400  Sum_probs=168.1

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcC-CcEEEEEeeCCCHHHHHHHHHHHHHHhC-
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG-IEVIGVVCHVSNGQQRKNLINQTIEKFG-   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~~-   88 (226)
                      .|++++|||||.|||++++++|+++|.+|++++|++++++...+|+.+.. .++.++.+|++++++   ..+++.+... 
T Consensus        48 ~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~---~ye~i~~~l~~  124 (312)
T KOG1014|consen   48 LGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDE---VYEKLLEKLAG  124 (312)
T ss_pred             cCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCch---hHHHHHHHhcC
Confidence            46999999999999999999999999999999999999999999998774 468899999999988   3444444433 


Q ss_pred             -CCCEEEEcCCCCC-CCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhh--cCCEEEEEeccCCcCCCCCCchhhHhH
Q 027248           89 -KIDVVVSNAAANP-SVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTK  164 (226)
Q Consensus        89 -~id~li~nag~~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~--~~~~iv~~sS~~~~~~~~~~~~Y~~sK  164 (226)
                       .+-+||||+|... .+..+.+.+.+++++.+.+|..+...+++.++|.|.  ++|-||++||.++..+.|.++.|++||
T Consensus       125 ~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~s~ysasK  204 (312)
T KOG1014|consen  125 LDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLLSVYSASK  204 (312)
T ss_pred             CceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChhHHHHHHHH
Confidence             5668999999875 356788888889999999999999999999999994  468999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccc
Q 027248          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYIT  201 (226)
Q Consensus       165 aa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~  201 (226)
                      +.++.|+++|..|+.. ||.|-++.|+.|.|+|...-.
T Consensus       205 ~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~~~  242 (312)
T KOG1014|consen  205 AFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMAKYRK  242 (312)
T ss_pred             HHHHHHHHHHHHHHHhcCeEEEEeehhheeccccccCC
Confidence            9999999999999988 999999999999999976543

>PRK07041 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-33  Score=223.02  Aligned_cols=201  Identities=24%  Similarity=0.395  Sum_probs=168.8

Q ss_pred             EEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCEEEE
Q 027248           16 IVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVS   95 (226)
Q Consensus        16 lItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~li~   95 (226)
                      +||||++|||++++++|+++|++|++++|++++.+...+++. .+.++.++.+|+++++++++++++    .+++|+|||
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~----~~~id~li~   75 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALG-GGAPVRTAALDITDEAAVDAFFAE----AGPFDHVVI   75 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh-cCCceEEEEccCCCHHHHHHHHHh----cCCCCEEEE
Confidence            599999999999999999999999999999877776666554 355688899999999999888775    478999999


Q ss_pred             cCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHhHHHHHHHHHHHH
Q 027248           96 NAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALA  175 (226)
Q Consensus        96 nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~la  175 (226)
                      |+|... ..++.+.+.++|++++++|+.+++++++  .+.+.+.++||++||..+..+.++.+.|++||+++++|+++++
T Consensus        76 ~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~la  152 (230)
T PRK07041         76 TAADTP-GGPVRALPLAAAQAAMDSKFWGAYRVAR--AARIAPGGSLTFVSGFAAVRPSASGVLQGAINAALEALARGLA  152 (230)
T ss_pred             CCCCCC-CCChhhCCHHHHHHHHHHHHHHHHHHHh--hhhhcCCeEEEEECchhhcCCCCcchHHHHHHHHHHHHHHHHH
Confidence            999875 4567788899999999999999999999  5566667899999999999888999999999999999999999


Q ss_pred             HHhCCCeEEEEEecCceeCCcccccccC--ch----hhhhhccCCCCCchhhhccc
Q 027248          176 AEMAPDTRVNCVAPGFVPTHFAEYITSN--DG----VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       176 ~e~~~~i~v~~v~Pg~v~t~~~~~~~~~--~~----~~~~~~~~~~~~p~~~a~av  225 (226)
                      .|+.+ |++++++||+++|++.......  ..    .....+..+...|+|+|+++
T Consensus       153 ~e~~~-irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  207 (230)
T PRK07041        153 LELAP-VRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPARRVGQPEDVANAI  207 (230)
T ss_pred             HHhhC-ceEEEEeecccccHHHHhhhccchHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            99875 9999999999999986543221  11    12223445667899999875

>PRK07023 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-33  Score=224.96  Aligned_cols=205  Identities=22%  Similarity=0.281  Sum_probs=170.7

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHH-HHHHh---CC
Q 027248           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQ-TIEKF---GK   89 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~-~~~~~---~~   89 (226)
                      +++||||++|||++++++|+++|++|++++|+.++.  .   ....+.++..+++|+++++++++++++ +.+.+   ++
T Consensus         3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~---~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~   77 (243)
T PRK07023          3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--L---AAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGAS   77 (243)
T ss_pred             eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--h---hhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCC
Confidence            599999999999999999999999999999987542  1   122345688899999999999998877 55554   37


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHHH
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~  167 (226)
                      +|++|||||......++.+.+.++|++.+++|+.+++.+++.+.+.+.+  .++||++||..+..+.+++..|+++|+++
T Consensus        78 ~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~  157 (243)
T PRK07023         78 RVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAGWSVYCATKAAL  157 (243)
T ss_pred             ceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCCCchHHHHHHHHH
Confidence            9999999998654466778889999999999999999999999999864  47999999999998999999999999999


Q ss_pred             HHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC--------chhhhhhccCCCCCchhhhcc
Q 027248          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN--------DGVVSSVSSLKLSPPSSLTLA  224 (226)
Q Consensus       168 ~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~--------~~~~~~~~~~~~~~p~~~a~a  224 (226)
                      +++++.++.| .+ +|+++.|+||+++|++.......        ..+....+..++.+|+++|+.
T Consensus       158 ~~~~~~~~~~-~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~  222 (243)
T PRK07023        158 DHHARAVALD-ANRALRIVSLAPGVVDTGMQATIRATDEERFPMRERFRELKASGALSTPEDAARR  222 (243)
T ss_pred             HHHHHHHHhc-CCCCcEEEEecCCccccHHHHHHHhcccccchHHHHHHHhhhcCCCCCHHHHHHH
Confidence            9999999999 66 99999999999999986532111        112333445678999999873

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=4.2e-33  Score=243.09  Aligned_cols=211  Identities=25%  Similarity=0.380  Sum_probs=175.6

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcc--hHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK--NVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      .++||+++||||++|||++++++|+++|++|++++|...  .++...+++   +  ...+.+|++++++++++++.+.+.
T Consensus       207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~---~--~~~~~~Dv~~~~~~~~~~~~~~~~  281 (450)
T PRK08261        207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRV---G--GTALALDITAPDAPARIAEHLAER  281 (450)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc---C--CeEEEEeCCCHHHHHHHHHHHHHh
Confidence            357899999999999999999999999999999988532  222222222   2  346789999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhh--hhcCCEEEEEeccCCcCCCCCCchhhHhH
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPH--LQKGSSVVLISSIAGYQPQSSMAMYGVTK  164 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~--l~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  164 (226)
                      ++++|++|||||+.. ...+.+.+.++|+.++++|+.+++++.+++.+.  ++++++||++||..+..+.++...|+++|
T Consensus       282 ~g~id~vi~~AG~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~~~~Y~asK  360 (450)
T PRK08261        282 HGGLDIVVHNAGITR-DKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRGQTNYAASK  360 (450)
T ss_pred             CCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCChHHHHHH
Confidence            999999999999876 567888899999999999999999999999994  45668999999999988889999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC-chhhhh-hccCCCCCchhhhccc
Q 027248          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN-DGVVSS-VSSLKLSPPSSLTLAV  225 (226)
Q Consensus       165 aa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~-~~~~~~-~~~~~~~~p~~~a~av  225 (226)
                      +++++|+++++.|+.+ +|++|+|+||+++|++....... .+..+. ....+...|+|+|+++
T Consensus       361 aal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~l~~~~~p~dva~~~  424 (450)
T PRK08261        361 AGVIGLVQALAPLLAERGITINAVAPGFIETQMTAAIPFATREAGRRMNSLQQGGLPVDVAETI  424 (450)
T ss_pred             HHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhccchhHHHHHhhcCCcCCCCCHHHHHHHH
Confidence            9999999999999988 99999999999999987654221 111111 1234457899998875

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=100.00  E-value=1.8e-32  Score=220.27  Aligned_cols=216  Identities=30%  Similarity=0.504  Sum_probs=180.9

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcch-HHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN-VDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      ++++|+++||||+|+||++++++|+++|++|+++.|+.++ .+...+++...+.++..+.+|+++++++.++++++.+.+
T Consensus         2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (248)
T PRK05557          2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEF   81 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3467999999999999999999999999999888887653 445555565556678889999999999999999999989


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcC--CEEEEEeccCCcCCCCCCchhhHhHH
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKG--SSVVLISSIAGYQPQSSMAMYGVTKT  165 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~--~~iv~~sS~~~~~~~~~~~~Y~~sKa  165 (226)
                      +++|++||++|... ..+..+.+.+++++++++|+.+++.+.+++.+.+.+.  +++|++||..+..+.++...|+++|+
T Consensus        82 ~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~~~~y~~sk~  160 (248)
T PRK05557         82 GGVDILVNNAGITR-DNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPGQANYAASKA  160 (248)
T ss_pred             CCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCCCchhHHHHH
Confidence            99999999999875 4566677889999999999999999999999998543  68999999988888888999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC--chhhhhhccCCCCCchhhhccc
Q 027248          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN--DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       166 a~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +++.++++++.++.+ +|++++++||+++|++.+.....  ..+....+......|+++|+++
T Consensus       161 a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~  223 (248)
T PRK05557        161 GVIGFTKSLARELASRGITVNAVAPGFIETDMTDALPEDVKEAILAQIPLGRLGQPEEIASAV  223 (248)
T ss_pred             HHHHHHHHHHHHhhhhCeEEEEEecCccCCccccccChHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            999999999999987 99999999999999986654211  1122223345567889988764

>PRK07577 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-32  Score=220.26  Aligned_cols=201  Identities=24%  Similarity=0.331  Sum_probs=168.7

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      .+|+++||||+++||++++++|+++|++|++++|+.+..      .     ...++.+|+++.++++++++++.+.+ ++
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~------~-----~~~~~~~D~~~~~~~~~~~~~~~~~~-~~   69 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD------F-----PGELFACDLADIEQTAATLAQINEIH-PV   69 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc------c-----CceEEEeeCCCHHHHHHHHHHHHHhC-CC
Confidence            479999999999999999999999999999999987541      0     12467899999999999999988876 68


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHHHH
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALL  168 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~  168 (226)
                      |++|||+|... ..++.+.+.++|++++++|+.+++.+.++++|.|++  .++||++||... .+.++...|++||++++
T Consensus        70 d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~-~~~~~~~~Y~~sK~a~~  147 (234)
T PRK07577         70 DAIVNNVGIAL-PQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAI-FGALDRTSYSAAKSALV  147 (234)
T ss_pred             cEEEECCCCCC-CCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccc-cCCCCchHHHHHHHHHH
Confidence            99999999876 466778889999999999999999999999999864  479999999864 46678899999999999


Q ss_pred             HHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC-c----hhhhhhccCCCCCchhhhccc
Q 027248          169 GLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN-D----GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       169 ~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~-~----~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +|+++++.|+.+ ||++++|+||+++|++....... .    ......+..+...|+|+|+++
T Consensus       148 ~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~  210 (234)
T PRK07577        148 GCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIPMRRLGTPEEVAAAI  210 (234)
T ss_pred             HHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcCCCCCCcCHHHHHHHH
Confidence            999999999988 99999999999999987544221 1    122233445567899998764

>PRK08324 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.1e-32  Score=250.74  Aligned_cols=217  Identities=29%  Similarity=0.412  Sum_probs=187.6

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      ...++||+++||||+||||++++++|+++|++|++++|+.++++...+++... ..+.++.+|++++++++.+++++.+.
T Consensus       417 ~~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~-~~v~~v~~Dvtd~~~v~~~~~~~~~~  495 (681)
T PRK08324        417 PKPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP-DRALGVACDVTDEAAVQAAFEEAALA  495 (681)
T ss_pred             CcCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc-CcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            34568999999999999999999999999999999999998887777766544 46888999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc---CCEEEEEeccCCcCCCCCCchhhHh
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVT  163 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~---~~~iv~~sS~~~~~~~~~~~~Y~~s  163 (226)
                      +|++|++|||||... ..++.+.+.++|++++++|+.|++.+++++.+.|++   +++||++||..+..+.++.+.|++|
T Consensus       496 ~g~iDvvI~~AG~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~~~~Y~as  574 (681)
T PRK08324        496 FGGVDIVVSNAGIAI-SGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGAA  574 (681)
T ss_pred             cCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCCcHHHHHH
Confidence            999999999999876 567888899999999999999999999999999966   4799999999998888999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCce--eCCccccccc----------Cc----hhhhhhccCCCCCchhhhccc
Q 027248          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFV--PTHFAEYITS----------ND----GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       164 Kaa~~~~~~~la~e~~~-~i~v~~v~Pg~v--~t~~~~~~~~----------~~----~~~~~~~~~~~~~p~~~a~av  225 (226)
                      |++++++++.++.|+.+ ||++|.|+||++  .|++....+.          ..    .+.......+...|+|+|+++
T Consensus       575 Kaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~DvA~a~  653 (681)
T PRK08324        575 KAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLLKREVTPEDVAEAV  653 (681)
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHHHHhcCCcCCccCHHHHHHHH
Confidence            99999999999999988 999999999999  8887543221          11    122233345678899998874

>PRK07326 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-32  Score=218.89  Aligned_cols=207  Identities=28%  Similarity=0.476  Sum_probs=178.1

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      +.+|+++||||+|+||++++++|+++|++|++++|++++++...+++.+. ..+..+.+|+++.++++.+++++.+.+++
T Consensus         4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (237)
T PRK07326          4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK-GNVLGLAADVRDEADVQRAVDAIVAAFGG   82 (237)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc-CcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            45799999999999999999999999999999999998887777776544 56888999999999999999999999999


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc-CCEEEEEeccCCcCCCCCCchhhHhHHHHH
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-GSSVVLISSIAGYQPQSSMAMYGVTKTALL  168 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~-~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~  168 (226)
                      +|++||++|... ..++.+.+.+++++++++|+.+++.+++++++.+++ .++||++||..+..+.++...|+.+|++++
T Consensus        83 ~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~y~~sk~a~~  161 (237)
T PRK07326         83 LDVLIANAGVGH-FAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNFFAGGAAYNASKFGLV  161 (237)
T ss_pred             CCEEEECCCCCC-CCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccCCCCCchHHHHHHHHH
Confidence            999999999865 466778899999999999999999999999998843 578999999988888888899999999999


Q ss_pred             HHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          169 GLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       169 ~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ++++.++.|+.. |+++++++||++.|++........       .....+|+++|+.+
T Consensus       162 ~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~-------~~~~~~~~d~a~~~  212 (237)
T PRK07326        162 GFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTPSEK-------DAWKIQPEDIAQLV  212 (237)
T ss_pred             HHHHHHHHHhcccCcEEEEEeeccccCcccccccchh-------hhccCCHHHHHHHH
Confidence            999999999987 999999999999998765432111       01135677777643

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=100.00  E-value=2e-32  Score=219.85  Aligned_cols=214  Identities=32%  Similarity=0.500  Sum_probs=184.6

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      .+|+++||||+++||.+++++|+++|++|++++|++++.+....++...+.++.++.+|++++++++++++.+.+.++.+
T Consensus         4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (246)
T PRK05653          4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGAL   83 (246)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            46899999999999999999999999999999999988877777777677788899999999999999999999888999


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcC--CEEEEEeccCCcCCCCCCchhhHhHHHHH
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKG--SSVVLISSIAGYQPQSSMAMYGVTKTALL  168 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~--~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~  168 (226)
                      |++||++|... ..+..+.+.++|++.++.|+.+++++.+++.|++.+.  ++||++||..+..+.++...|+.+|++++
T Consensus        84 d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~~~~~y~~sk~~~~  162 (246)
T PRK05653         84 DILVNNAGITR-DALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNPGQTNYSAAKAGVI  162 (246)
T ss_pred             CEEEECCCcCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCCCCcHhHhHHHHHH
Confidence            99999999865 4566778889999999999999999999999998543  69999999988888888999999999999


Q ss_pred             HHHHHHHHHhCC-CeEEEEEecCceeCCccccccc--CchhhhhhccCCCCCchhhhccc
Q 027248          169 GLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS--NDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       169 ~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~--~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      .+++.++.++.+ ++++++++||.+.+++......  .......++...+..|+++|+++
T Consensus       163 ~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  222 (246)
T PRK05653        163 GFTKALALELASRGITVNAVAPGFIDTDMTEGLPEEVKAEILKEIPLGRLGQPEEVANAV  222 (246)
T ss_pred             HHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhhHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            999999999987 9999999999999997754221  11222334446678889988753

>PRK09135 pteridine reductase; Provisional

Probab=100.00  E-value=4.4e-32  Score=218.42  Aligned_cols=215  Identities=27%  Similarity=0.387  Sum_probs=176.8

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCc-chHHHHHHHHHhc-CCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ-KNVDEAVVKLKAR-GIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~-~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      .++|+++||||+++||++++++|+++|++|++++|+. +..+.....+... ...+.++.+|+++.++++.+++++.+++
T Consensus         4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   83 (249)
T PRK09135          4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAF   83 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3579999999999999999999999999999999864 3444544455433 3357788999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc-CCEEEEEeccCCcCCCCCCchhhHhHHH
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-GSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~-~~~iv~~sS~~~~~~~~~~~~Y~~sKaa  166 (226)
                      +++|++|||||... ..++.+.+.+++++++++|+.|++.+.+++.|.+.+ .+.+++++|..+..+.++...|+.||++
T Consensus        84 ~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~  162 (249)
T PRK09135         84 GRLDALVNNASSFY-PTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHAERPLKGYPVYCAAKAA  162 (249)
T ss_pred             CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhhcCCCCCchhHHHHHHH
Confidence            99999999999865 355667788899999999999999999999998854 5788888888777788889999999999


Q ss_pred             HHHHHHHHHHHhCCCeEEEEEecCceeCCcccccccCch---hhhhhccCCCCCchhhhccc
Q 027248          167 LLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDG---VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       167 ~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~~~~~~~~~---~~~~~~~~~~~~p~~~a~av  225 (226)
                      ++.+++.++.|+.++++++++.||++.||+.........   ...........+|+|+|+++
T Consensus       163 ~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~  224 (249)
T PRK09135        163 LEMLTRSLALELAPEVRVNAVAPGAILWPEDGNSFDEEARQAILARTPLKRIGTPEDIAEAV  224 (249)
T ss_pred             HHHHHHHHHHHHCCCCeEEEEEeccccCccccccCCHHHHHHHHhcCCcCCCcCHHHHHHHH
Confidence            999999999999778999999999999998643222111   11222334456789988875

>PRK07074 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.9e-32  Score=220.21  Aligned_cols=210  Identities=24%  Similarity=0.311  Sum_probs=176.4

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id   91 (226)
                      +|+++||||+++||++++++|+++|++|++++|+.++.+...+++.  +.++.++.+|+++.+++..+++++.++++++|
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   79 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG--DARFVPVACDLTDAASLAAALANAAAERGPVD   79 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            5899999999999999999999999999999999888777766652  34678899999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHHHHH
Q 027248           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLG  169 (226)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~  169 (226)
                      ++|||+|... ..++.+.+.++|.+.+++|+.+++.+.+++++.+.+  .++||++||..+.. ..+...|+.+|++++.
T Consensus        80 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-~~~~~~y~~sK~a~~~  157 (257)
T PRK07074         80 VLVANAGAAR-AASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMA-ALGHPAYSAAKAGLIH  157 (257)
T ss_pred             EEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcC-CCCCcccHHHHHHHHH
Confidence            9999999865 356777889999999999999999999999998853  47899999987653 3466789999999999


Q ss_pred             HHHHHHHHhCC-CeEEEEEecCceeCCcccccccC-chhh----hhhccCCCCCchhhhccc
Q 027248          170 LTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN-DGVV----SSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       170 ~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~-~~~~----~~~~~~~~~~p~~~a~av  225 (226)
                      ++++++.|+.+ ||+|++++||+++|++....... ....    ...+...+..|+|+++++
T Consensus       158 ~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~  219 (257)
T PRK07074        158 YTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKWYPLQDFATPDDVANAV  219 (257)
T ss_pred             HHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence            99999999998 99999999999999976432211 1111    223345678899988764

>PRK12828 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-32  Score=217.58  Aligned_cols=209  Identities=23%  Similarity=0.333  Sum_probs=177.3

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      +.+++|+++||||+|+||++++++|+++|++|++++|++++..+..+++...  .+..+.+|+++.++++.+++++.+.+
T Consensus         3 ~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (239)
T PRK12828          3 HSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPAD--ALRIGGIDLVDPQAARRAVDEVNRQF   80 (239)
T ss_pred             CCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhc--CceEEEeecCCHHHHHHHHHHHHHHh
Confidence            4577999999999999999999999999999999999987776666655443  35567799999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHH
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKT  165 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKa  165 (226)
                      +++|++||++|... .....+.+.+++++.+++|+.+++.+++++.|.+++  .+++|++||..+..+.++...|+.+|+
T Consensus        81 ~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk~  159 (239)
T PRK12828         81 GRLDALVNIAGAFV-WGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPGMGAYAAAKA  159 (239)
T ss_pred             CCcCEEEECCcccC-cCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCCCcchhHHHHH
Confidence            99999999999764 455667788999999999999999999999998854  479999999998888888999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       166 a~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +++.+++.++.++.+ +|+++.+.||++.|++.........      ...++.++|+|+++
T Consensus       160 a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~~~~~~------~~~~~~~~dva~~~  214 (239)
T PRK12828        160 GVARLTEALAAELLDRGITVNAVLPSIIDTPPNRADMPDAD------FSRWVTPEQIAAVI  214 (239)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhcCCchh------hhcCCCHHHHHHHH
Confidence            999999999999877 9999999999999986543322211      12356788887653

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=100.00  E-value=3.2e-32  Score=217.95  Aligned_cols=195  Identities=21%  Similarity=0.226  Sum_probs=157.6

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCC--CeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEG--ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      ++++||||++|||++++++|+++|  ..|++..|+....        ....++..+++|+++.++++++    .++++++
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~--------~~~~~~~~~~~Dls~~~~~~~~----~~~~~~i   68 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD--------FQHDNVQWHALDVTDEAEIKQL----SEQFTQL   68 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc--------cccCceEEEEecCCCHHHHHHH----HHhcCCC
Confidence            469999999999999999999985  5566667755321        1134678899999999998774    3456899


Q ss_pred             CEEEEcCCCCCC-----CCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcC---CCCCCchh
Q 027248           91 DVVVSNAAANPS-----VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQ---PQSSMAMY  160 (226)
Q Consensus        91 d~li~nag~~~~-----~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~---~~~~~~~Y  160 (226)
                      |+||||||....     ...+.+.+.++|++.+++|+.+++.+++.++|.|++  .++|+++||..+..   +.+++..|
T Consensus        69 d~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~~~~~~~~~Y  148 (235)
T PRK09009         69 DWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISDNRLGGWYSY  148 (235)
T ss_pred             CEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccccccCCCCCcchh
Confidence            999999998742     235678888999999999999999999999999865  36899999876532   34567799


Q ss_pred             hHhHHHHHHHHHHHHHHhCC---CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          161 GVTKTALLGLTKALAAEMAP---DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       161 ~~sKaa~~~~~~~la~e~~~---~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +++|+++++|+++|+.|+.+   +|+|++|+||+++|++.+...      ...+..++.+|+++|+++
T Consensus       149 ~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~~------~~~~~~~~~~~~~~a~~~  210 (235)
T PRK09009        149 RASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPFQ------QNVPKGKLFTPEYVAQCL  210 (235)
T ss_pred             hhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcchh------hccccCCCCCHHHHHHHH
Confidence            99999999999999999864   899999999999999876532      223445678999998764

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=8.5e-32  Score=216.36  Aligned_cols=215  Identities=32%  Similarity=0.464  Sum_probs=181.4

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcc-hHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK-NVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      ++.|+++||||+|+||++++++|+++|++|+++.|+.+ ..+...+.+.+.+.++.++.+|++++++++++++++.+.++
T Consensus         4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~   83 (249)
T PRK12825          4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFG   83 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcC
Confidence            45689999999999999999999999999877666554 44445555555566788999999999999999999988889


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa  166 (226)
                      .+|++||+||... ...+.+.+.++|++.+++|+.+++++.+.+.+++++  .+++|++||..+..+.++...|+.+|++
T Consensus        84 ~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~~~~~y~~sK~~  162 (249)
T PRK12825         84 RIDILVNNAGIFE-DKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYAAAKAG  162 (249)
T ss_pred             CCCEEEECCccCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCCCchHHHHHHHH
Confidence            9999999999765 566677889999999999999999999999998854  3699999999998888889999999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchhhh--hhccCCCCCchhhhccc
Q 027248          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVVS--SVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       167 ~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~--~~~~~~~~~p~~~a~av  225 (226)
                      ++++++.++.++.+ +++++.++||++.|++............  ..+..+..+|+|+|+++
T Consensus       163 ~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  224 (249)
T PRK12825        163 LVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEAREAKDAETPLGRSGTPEDIARAV  224 (249)
T ss_pred             HHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchhHHhhhccCCCCCCcCHHHHHHHH
Confidence            99999999999987 9999999999999998766543332222  34555678888888764

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=100.00  E-value=7.6e-32  Score=217.90  Aligned_cols=213  Identities=28%  Similarity=0.415  Sum_probs=180.8

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id   91 (226)
                      +|+++||||+|+||++++++|+++|++|++++|+.+..+...+++...+.++..+.+|++++++++.+++.+.+.++.+|
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   80 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD   80 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            47899999999999999999999999999999998887777777766566788899999999999999999999889999


Q ss_pred             EEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHHHHH
Q 027248           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLG  169 (226)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~  169 (226)
                      ++|||+|... .....+.+.+++++++++|+.+++.+++.+++.|++  .+++|++||..+..+.++...|+.+|+++++
T Consensus        81 ~vi~~a~~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~~~~y~~sk~a~~~  159 (255)
T TIGR01963        81 ILVNNAGIQH-VAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASPFKSAYVAAKHGLIG  159 (255)
T ss_pred             EEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCCCCchhHHHHHHHHH
Confidence            9999999865 455667788999999999999999999999998854  3689999999888888899999999999999


Q ss_pred             HHHHHHHHhCC-CeEEEEEecCceeCCcccccccCc---------h-----hhhhhccCCCCCchhhhccc
Q 027248          170 LTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND---------G-----VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       170 ~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~---------~-----~~~~~~~~~~~~p~~~a~av  225 (226)
                      +++.++.++.+ +|+++.++||++.|++........         .     +........+..++|+|+++
T Consensus       160 ~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~  230 (255)
T TIGR01963       160 LTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDEVAETA  230 (255)
T ss_pred             HHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHccCccccCcCHHHHHHHH
Confidence            99999999887 999999999999998754322110         0     11122334578899988763

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK08177 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.1e-32  Score=214.48  Aligned_cols=180  Identities=21%  Similarity=0.310  Sum_probs=155.2

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCE
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~   92 (226)
                      |+++||||++|||++++++|+++|++|++++|++++.+...+ .    .++.++.+|++++++++++++.+.+  +++|+
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-~----~~~~~~~~D~~d~~~~~~~~~~~~~--~~id~   74 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQA-L----PGVHIEKLDMNDPASLDQLLQRLQG--QRFDL   74 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHh-c----cccceEEcCCCCHHHHHHHHHHhhc--CCCCE
Confidence            789999999999999999999999999999999877654321 1    2466788999999999999988754  48999


Q ss_pred             EEEcCCCCCC-CCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcC-CEEEEEeccCCcCCC---CCCchhhHhHHHH
Q 027248           93 VVSNAAANPS-VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKG-SSVVLISSIAGYQPQ---SSMAMYGVTKTAL  167 (226)
Q Consensus        93 li~nag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~-~~iv~~sS~~~~~~~---~~~~~Y~~sKaa~  167 (226)
                      +|||||.... ..++.+.+.+++++.+++|+.+++.+.++++|+++++ ++++++||..+..+.   .+...|+++|+++
T Consensus        75 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~~~~~~~~~~~~Y~~sK~a~  154 (225)
T PRK08177         75 LFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGSVELPDGGEMPLYKASKAAL  154 (225)
T ss_pred             EEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCccccccCCCCCccchHHHHHHH
Confidence            9999998642 3456788899999999999999999999999998765 789999998765433   3567899999999


Q ss_pred             HHHHHHHHHHhCC-CeEEEEEecCceeCCcccc
Q 027248          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEY  199 (226)
Q Consensus       168 ~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~  199 (226)
                      ++|++.|+.|+.+ +|++|+|+||+++|++...
T Consensus       155 ~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~~~~  187 (225)
T PRK08177        155 NSMTRSFVAELGEPTLTVLSMHPGWVKTDMGGD  187 (225)
T ss_pred             HHHHHHHHHHhhcCCeEEEEEcCCceecCCCCC
Confidence            9999999999987 9999999999999998654

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.5e-31  Score=213.01  Aligned_cols=209  Identities=24%  Similarity=0.355  Sum_probs=172.4

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      +++||+++||||+++||.++++.|+++|++|++++|++++.+...+++... .++..+.+|++++++++++++++.+.++
T Consensus         2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   80 (238)
T PRK05786          2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKY-GNIHYVVGDVSSTESARNVIEKAAKVLN   80 (238)
T ss_pred             CcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            357899999999999999999999999999999999988777665655543 3578889999999999999999988889


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCc-CCCCCCchhhHhHHHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY-QPQSSMAMYGVTKTAL  167 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~-~~~~~~~~Y~~sKaa~  167 (226)
                      .+|.+|+|+|... ..+..+  .++++.++++|+.+++.+.+.++|.+++++++|++||..+. .+.+....|++||+++
T Consensus        81 ~id~ii~~ag~~~-~~~~~~--~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~~Y~~sK~~~  157 (238)
T PRK05786         81 AIDGLVVTVGGYV-EDTVEE--FSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKASPDQLSYAVAKAGL  157 (238)
T ss_pred             CCCEEEEcCCCcC-CCchHH--HHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcccCCCCchHHHHHHHHH
Confidence            9999999999754 233333  38899999999999999999999999888899999998764 3567778899999999


Q ss_pred             HHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchhhhhhc-cCCCCCchhhhccc
Q 027248          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVVSSVS-SLKLSPPSSLTLAV  225 (226)
Q Consensus       168 ~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~-~~~~~~p~~~a~av  225 (226)
                      +.+++.++.++.+ +|++++++||++.|++....    .+..... .....+|+++|+++
T Consensus       158 ~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~----~~~~~~~~~~~~~~~~~va~~~  213 (238)
T PRK05786        158 AKAVEILASELLGRGIRVNGIAPTTISGDFEPER----NWKKLRKLGDDMAPPEDFAKVI  213 (238)
T ss_pred             HHHHHHHHHHHhhcCeEEEEEecCccCCCCCchh----hhhhhccccCCCCCHHHHHHHH
Confidence            9999999999987 99999999999999874321    1111101 12367888888653

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=9.8e-32  Score=215.31  Aligned_cols=211  Identities=21%  Similarity=0.215  Sum_probs=186.8

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcC--CcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG--IEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      +.++||||++|||++++..+..+|++|.++.|+.++++++++++.-..  .++....+|+++-+++..+++++.+..+.+
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~  113 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI  113 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence            689999999999999999999999999999999999999999887542  236788899999999999999999999999


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcC---CEEEEEeccCCcCCCCCCchhhHhHHHH
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKG---SSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~---~~iv~~sS~~~~~~~~~~~~Y~~sKaa~  167 (226)
                      |.+|||||... .+.+++.+.++++..|++|++|+++++++.+|.|++.   |+|+.+||..+..+.+|+++|+++|+|+
T Consensus       114 d~l~~cAG~~v-~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~GysaYs~sK~al  192 (331)
T KOG1210|consen  114 DNLFCCAGVAV-PGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGYSAYSPSKFAL  192 (331)
T ss_pred             ceEEEecCccc-ccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcccccccccHHHHH
Confidence            99999999886 7899999999999999999999999999999999764   4999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCC-CeEEEEEecCceeCCcccc-cccCchhhhhhccC-CCCCchhhhcc
Q 027248          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEY-ITSNDGVVSSVSSL-KLSPPSSLTLA  224 (226)
Q Consensus       168 ~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~-~~~~p~~~a~a  224 (226)
                      .+|+.++++|+.+ ||+|....|+.++||.+++ ...++...+.+... ...++|++|.+
T Consensus       193 rgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En~tkP~~t~ii~g~ss~~~~e~~a~~  252 (331)
T KOG1210|consen  193 RGLAEALRQELIKYGVHVTLYYPPDTLTPGFERENKTKPEETKIIEGGSSVIKCEEMAKA  252 (331)
T ss_pred             HHHHHHHHHHHhhcceEEEEEcCCCCCCCccccccccCchheeeecCCCCCcCHHHHHHH
Confidence            9999999999988 9999999999999996644 33334333333222 36788888765

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.9e-33  Score=207.06  Aligned_cols=212  Identities=23%  Similarity=0.353  Sum_probs=183.9

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      .+|-+.+||||.+|+|++.++.|+++|++|++.+--..+-+...+++   +.++.+...|++++++++..+...+.+||+
T Consensus         7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel---g~~~vf~padvtsekdv~aala~ak~kfgr   83 (260)
T KOG1199|consen    7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL---GGKVVFTPADVTSEKDVRAALAKAKAKFGR   83 (260)
T ss_pred             hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh---CCceEEeccccCcHHHHHHHHHHHHhhccc
Confidence            57889999999999999999999999999999999888877777766   778999999999999999999999999999


Q ss_pred             CCEEEEcCCCCCCC-----CccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--------CCEEEEEeccCCcCCCCC
Q 027248           90 IDVVVSNAAANPSV-----DSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--------GSSVVLISSIAGYQPQSS  156 (226)
Q Consensus        90 id~li~nag~~~~~-----~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--------~~~iv~~sS~~~~~~~~~  156 (226)
                      +|.+|||||+....     +.-...+.|+|++++++|+.|+|++++....+|-.        +|.||+..|++++.+.-+
T Consensus        84 ld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~g  163 (260)
T KOG1199|consen   84 LDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQTG  163 (260)
T ss_pred             eeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCccc
Confidence            99999999986422     22344568999999999999999999999988822        368999999999999999


Q ss_pred             CchhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC--chhhhhhccC-CCCCchhhhcc
Q 027248          157 MAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN--DGVVSSVSSL-KLSPPSSLTLA  224 (226)
Q Consensus       157 ~~~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~-~~~~p~~~a~a  224 (226)
                      .++|++||.++-+|+--++++++. |||++.+.||..+||+...+.++  ..+...++.+ ++..|.|+|--
T Consensus       164 qaaysaskgaivgmtlpiardla~~gir~~tiapglf~tpllsslpekv~~fla~~ipfpsrlg~p~eyahl  235 (260)
T KOG1199|consen  164 QAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSSLPEKVKSFLAQLIPFPSRLGHPHEYAHL  235 (260)
T ss_pred             hhhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhhhhHHHHHHHHHhCCCchhcCChHHHHHH
Confidence            999999999999999999999998 99999999999999998887654  2234444433 58888887643

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=100.00  E-value=7.4e-31  Score=210.06  Aligned_cols=210  Identities=32%  Similarity=0.540  Sum_probs=177.1

Q ss_pred             EEEEcCCCchhHHHHHHHHhCCCeEEEEecCc-chHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCEE
Q 027248           15 AIVTASTQGIGFGIAERLGLEGASVVVSSRKQ-KNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVV   93 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~l   93 (226)
                      ++|||++++||.+++++|+++|++|++++|+. +..+...+.+...+.++..+.+|++++++++++++.+.+.++++|++
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL   80 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            58999999999999999999999999999875 45555556666666678899999999999999999999999999999


Q ss_pred             EEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHHHHHHH
Q 027248           94 VSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLT  171 (226)
Q Consensus        94 i~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~  171 (226)
                      |||+|... ...+.+.+.+++++.+++|+.+++.+.+.+.+.+.+  .++++++||..+..+.++...|+++|++++.++
T Consensus        81 i~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~~~~y~~~k~a~~~~~  159 (239)
T TIGR01830        81 VNNAGITR-DNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIGFT  159 (239)
T ss_pred             EECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCCchhHHHHHHHHHHH
Confidence            99999865 355667788999999999999999999999998844  469999999988888899999999999999999


Q ss_pred             HHHHHHhCC-CeEEEEEecCceeCCcccccccC--chhhhhhccCCCCCchhhhccc
Q 027248          172 KALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN--DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       172 ~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +.|+.++.. |++++.++||+++|++.......  ..+....+..+..+++++|+++
T Consensus       160 ~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~  216 (239)
T TIGR01830       160 KSLAKELASRNITVNAVAPGFIDTDMTDKLSEKVKKKILSQIPLGRFGTPEEVANAV  216 (239)
T ss_pred             HHHHHHHhhcCeEEEEEEECCCCChhhhhcChHHHHHHHhcCCcCCCcCHHHHHHHH
Confidence            999999877 99999999999999876543211  1122233445677889988653

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK08264 short chain dehydrogenase; Validated

Probab=100.00  E-value=7.6e-31  Score=210.27  Aligned_cols=180  Identities=28%  Similarity=0.390  Sum_probs=159.6

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      .+++|+++||||+|+||++++++|+++|+ +|++++|+.++.+.       .+.++.++.+|+++.++++++++.    +
T Consensus         3 ~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~----~   71 (238)
T PRK08264          3 DIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-------LGPRVVPLQLDVTDPASVAAAAEA----A   71 (238)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-------cCCceEEEEecCCCHHHHHHHHHh----c
Confidence            35789999999999999999999999999 89999998766543       345688899999999998877664    4


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHH
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKT  165 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKa  165 (226)
                      +++|++||++|......++.+.+.++|++.+++|+.+++.+.+++.|.+++  .+++|++||..+..+.++...|+.+|+
T Consensus        72 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK~  151 (238)
T PRK08264         72 SDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSASKA  151 (238)
T ss_pred             CCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCCCchHhHHHHH
Confidence            689999999998443567788899999999999999999999999998854  478999999999888889999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccc
Q 027248          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEY  199 (226)
Q Consensus       166 a~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~  199 (226)
                      +++++++.++.++.+ +++++++.||.++|++...
T Consensus       152 a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~  186 (238)
T PRK08264        152 AAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAG  186 (238)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEeCCccccccccc
Confidence            999999999999987 9999999999999998544

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.98  E-value=8.7e-31  Score=212.15  Aligned_cols=180  Identities=23%  Similarity=0.344  Sum_probs=160.5

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id   91 (226)
                      +|+++||||+||||++++++|++.|++|++++|+++..+...+.....+.++.++.+|++++++++.++.      +++|
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------~~id   75 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAE------WDVD   75 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhc------CCCC
Confidence            5889999999999999999999999999999999877777666666666678899999999998877643      4899


Q ss_pred             EEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHHHHH
Q 027248           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLG  169 (226)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~  169 (226)
                      +||||||... ..+..+.+.++|++.+++|+.+++.+.+.+++.+.+  .++||++||..+..+.++...|++||++++.
T Consensus        76 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~Y~~sK~a~~~  154 (257)
T PRK09291         76 VLLNNAGIGE-AGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITGPFTGAYCASKHALEA  154 (257)
T ss_pred             EEEECCCcCC-CcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCCCCcchhHHHHHHHHH
Confidence            9999999875 567888999999999999999999999999998854  3799999999988888889999999999999


Q ss_pred             HHHHHHHHhCC-CeEEEEEecCceeCCccc
Q 027248          170 LTKALAAEMAP-DTRVNCVAPGFVPTHFAE  198 (226)
Q Consensus       170 ~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~  198 (226)
                      +++.++.++.+ ||++++|+||++.|++..
T Consensus       155 ~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~  184 (257)
T PRK09291        155 IAEAMHAELKPFGIQVATVNPGPYLTGFND  184 (257)
T ss_pred             HHHHHHHHHHhcCcEEEEEecCcccccchh
Confidence            99999999987 999999999999998754

>PRK08017 oxidoreductase; Provisional

Probab=99.97  E-value=3.7e-30  Score=208.37  Aligned_cols=206  Identities=18%  Similarity=0.280  Sum_probs=171.3

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh-CCCC
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF-GKID   91 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-~~id   91 (226)
                      |+++||||+|+||+++++.|+++|++|++++|+.++++...    +.  .+..+.+|+++.++++++++++.+.. +.+|
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~----~~--~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~   76 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMN----SL--GFTGILLDLDDPESVERAADEVIALTDNRLY   76 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHH----hC--CCeEEEeecCCHHHHHHHHHHHHHhcCCCCe
Confidence            78999999999999999999999999999999987665432    22  35678899999999999999887754 6899


Q ss_pred             EEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHHHHH
Q 027248           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLG  169 (226)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~  169 (226)
                      .+|||+|... ..++.+.+.+++++.+++|+.|++++.+.+++.+++  .++||++||..+..+.++.+.|++||++++.
T Consensus        77 ~ii~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~~~~~  155 (256)
T PRK08017         77 GLFNNAGFGV-YGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALEA  155 (256)
T ss_pred             EEEECCCCCC-ccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCCCccHHHHHHHHHHH
Confidence            9999999765 467778899999999999999999999999998854  3789999999988888999999999999999


Q ss_pred             HHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch---h-hhhhccCCCCCchhhhccc
Q 027248          170 LTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG---V-VSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       170 ~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~---~-~~~~~~~~~~~p~~~a~av  225 (226)
                      ++++++.++.+ +++++.+.||+++|++.+.......   . ...........|+|+|+++
T Consensus       156 ~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~  216 (256)
T PRK08017        156 WSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAARFTLGPEAVVPKL  216 (256)
T ss_pred             HHHHHHHHHhhcCCEEEEEeCCCcccchhhcccchhhccchhhhHHHhhcCCCHHHHHHHH
Confidence            99999999887 9999999999999998765432211   1 1111122357888888764

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.97  E-value=7e-30  Score=205.89  Aligned_cols=186  Identities=17%  Similarity=0.174  Sum_probs=141.2

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      ..++||+++||||++|||++++++|+++|++|++++|++.....   .. ..+. ...+.+|+++.+++++       .+
T Consensus        10 ~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~---~~-~~~~-~~~~~~D~~~~~~~~~-------~~   77 (245)
T PRK12367         10 STWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSE---SN-DESP-NEWIKWECGKEESLDK-------QL   77 (245)
T ss_pred             HhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhh---hh-ccCC-CeEEEeeCCCHHHHHH-------hc
Confidence            34678999999999999999999999999999999998732211   11 1122 2567899999987653       35


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc----CC-EEEEEeccCCcCCCCCCchhhH
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK----GS-SVVLISSIAGYQPQSSMAMYGV  162 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~----~~-~iv~~sS~~~~~~~~~~~~Y~~  162 (226)
                      +++|+||||||...    ..+.+.++|++++++|+.|+++++++++|.|++    ++ .++..||.++..+ ++.+.|++
T Consensus        78 ~~iDilVnnAG~~~----~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~-~~~~~Y~a  152 (245)
T PRK12367         78 ASLDVLILNHGINP----GGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQP-ALSPSYEI  152 (245)
T ss_pred             CCCCEEEECCccCC----cCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCC-CCCchhHH
Confidence            68999999999743    234678999999999999999999999999854    23 3545556555443 46778999


Q ss_pred             hHHHHHHHH---HHHHHHhCC-CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhcc
Q 027248          163 TKTALLGLT---KALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLA  224 (226)
Q Consensus       163 sKaa~~~~~---~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~a  224 (226)
                      ||+|+..+.   +.++.|+.. +|+|+.++||+++|++..              ....+|+++|+.
T Consensus       153 SKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~~--------------~~~~~~~~vA~~  204 (245)
T PRK12367        153 SKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSELNP--------------IGIMSADFVAKQ  204 (245)
T ss_pred             HHHHHHHHHHHHHHHHHhhcccccEEEEecCCCcccccCc--------------cCCCCHHHHHHH
Confidence            999986554   444445566 999999999999998732              124678887765

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=99.97  E-value=3.5e-29  Score=192.23  Aligned_cols=216  Identities=22%  Similarity=0.281  Sum_probs=188.2

Q ss_pred             cccCCCEEEEEcCC--CchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248            8 KRFQGKVAIVTAST--QGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus         8 ~~~~gk~vlItGa~--~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      ..++||+++|+|=.  ..|++.++++|.++|+++.++..++ ++++..+++.+.-+...++.||++++++++.+++++.+
T Consensus         2 g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~   80 (259)
T COG0623           2 GLLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKK   80 (259)
T ss_pred             CccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHH
Confidence            46789999999954  8999999999999999999999988 77777777777665677899999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCC---CCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhH
Q 027248           86 KFGKIDVVVSNAAANPS---VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGV  162 (226)
Q Consensus        86 ~~~~id~li~nag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~  162 (226)
                      ++|++|.|||+-|+...   .+.+.+++.|+|...+++..++...+.+++.|+|.+++.||.+|=..+....|++...+.
T Consensus        81 ~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlgs~r~vPnYNvMGv  160 (259)
T COG0623          81 KWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLGSERVVPNYNVMGV  160 (259)
T ss_pred             hhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEeccceeecCCCchhHH
Confidence            99999999999998753   456788999999999999999999999999999999999999998888888999999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch----hhhhhccCCCCCchhhhcc
Q 027248          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG----VVSSVSSLKLSPPSSLTLA  224 (226)
Q Consensus       163 sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~----~~~~~~~~~~~~p~~~a~a  224 (226)
                      +||+++.-+|.|+.++++ |||||+|+-|+++|=-...+..-..    .....+.++..++|||..+
T Consensus       161 AKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~f~~~l~~~e~~aPl~r~vt~eeVG~t  227 (259)
T COG0623         161 AKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGDFRKMLKENEANAPLRRNVTIEEVGNT  227 (259)
T ss_pred             HHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhccccHHHHHHHHHhhCCccCCCCHHHhhhh
Confidence            999999999999999999 9999999999999954333322111    3344566778888888754

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=2.6e-31  Score=203.67  Aligned_cols=214  Identities=28%  Similarity=0.268  Sum_probs=171.6

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      .+|++|+||+|.|||..+++.+.+++-.....+++....+ ........+........|++...-...+++..++++++.
T Consensus         5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~-~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~gkr   83 (253)
T KOG1204|consen    5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE-LEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKGGKR   83 (253)
T ss_pred             cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc-ccceEEEecCCcceechHHHHHHHHHHHHhhhhhcCCce
Confidence            4689999999999999999999888876555555444333 111111223334456678888888889999999999999


Q ss_pred             CEEEEcCCCCCCCCccc--cccHHHHHHHHHHHHHHHHHHHHHHhhhhhcC---CEEEEEeccCCcCCCCCCchhhHhHH
Q 027248           91 DVVVSNAAANPSVDSIL--QTKESVLDKLWDINVKSSILLLQDAAPHLQKG---SSVVLISSIAGYQPQSSMAMYGVTKT  165 (226)
Q Consensus        91 d~li~nag~~~~~~~~~--~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~---~~iv~~sS~~~~~~~~~~~~Y~~sKa  165 (226)
                      |++|||||.........  ..+.++|++.|++|+++++.+.+.++|.+++.   +.+||+||.++..|.+++++||.+||
T Consensus        84 ~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~wa~yc~~Ka  163 (253)
T KOG1204|consen   84 DIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSSWAAYCSSKA  163 (253)
T ss_pred             eEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccHHHHhhhhHH
Confidence            99999999886544444  77889999999999999999999999999775   78999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCeEEEEEecCceeCCcccccccCc--------hhhhhhccCCCCCchhhhccc
Q 027248          166 ALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSND--------GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       166 a~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~~~~~~~~--------~~~~~~~~~~~~~p~~~a~av  225 (226)
                      |.+||.+.|+.|=..++++.+++||++||+|........        .+......+.+.+|...|+.+
T Consensus       164 Ar~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~~~~ll~~~~~a~~l  231 (253)
T KOG1204|consen  164 ARNMYFMVLASEEPFDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELKESGQLLDPQVTAKVL  231 (253)
T ss_pred             HHHHHHHHHhhcCccceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHHhcCCcCChhhHHHHH
Confidence            999999999999323999999999999999987665443        244455666788887776543

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.97  E-value=5.6e-29  Score=197.72  Aligned_cols=178  Identities=18%  Similarity=0.237  Sum_probs=148.2

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCE
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~   92 (226)
                      |+++||||+++||++++++|+++|++|++++|+++..+...    ..  .+.++.+|+++.++++.+++++..  +++|+
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~----~~--~~~~~~~D~~~~~~v~~~~~~~~~--~~~d~   73 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQ----AL--GAEALALDVADPASVAGLAWKLDG--EALDA   73 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHH----hc--cceEEEecCCCHHHHHHHHHHhcC--CCCCE
Confidence            67999999999999999999999999999999976654432    22  245789999999999988776532  47999


Q ss_pred             EEEcCCCCCC-CCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc-CCEEEEEeccCCcCCCCCC---chhhHhHHHH
Q 027248           93 VVSNAAANPS-VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-GSSVVLISSIAGYQPQSSM---AMYGVTKTAL  167 (226)
Q Consensus        93 li~nag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~-~~~iv~~sS~~~~~~~~~~---~~Y~~sKaa~  167 (226)
                      +|||+|.... .....+.+.++|++++++|+.+++.+++++.|+|++ .++++++||..+..+....   ..|+++|+++
T Consensus        74 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~Y~~sK~a~  153 (222)
T PRK06953         74 AVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDATGTTGWLYRASKAAL  153 (222)
T ss_pred             EEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccccCCCccccHHhHHHH
Confidence            9999998631 245567789999999999999999999999998855 5789999998776553322   3599999999


Q ss_pred             HHHHHHHHHHhCCCeEEEEEecCceeCCcccc
Q 027248          168 LGLTKALAAEMAPDTRVNCVAPGFVPTHFAEY  199 (226)
Q Consensus       168 ~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~~~  199 (226)
                      +++++.++.++ +++++++|+||+++|++.+.
T Consensus       154 ~~~~~~~~~~~-~~i~v~~v~Pg~i~t~~~~~  184 (222)
T PRK06953        154 NDALRAASLQA-RHATCIALHPGWVRTDMGGA  184 (222)
T ss_pred             HHHHHHHhhhc-cCcEEEEECCCeeecCCCCC
Confidence            99999999886 47999999999999998653

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.96  E-value=6.3e-28  Score=191.73  Aligned_cols=202  Identities=24%  Similarity=0.360  Sum_probs=165.4

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id   91 (226)
                      .|+++||||+|+||++++++|+++ ++|++++|+.+..+...++.    ..+.++.+|+++.++++++++.    .+++|
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~----~~~id   73 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL----PGATPFPVDLTDPEAIAAAVEQ----LGRLD   73 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh----ccceEEecCCCCHHHHHHHHHh----cCCCC
Confidence            378999999999999999999999 99999999876655443322    2467889999999998887764    35899


Q ss_pred             EEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc-CCEEEEEeccCCcCCCCCCchhhHhHHHHHHH
Q 027248           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-GSSVVLISSIAGYQPQSSMAMYGVTKTALLGL  170 (226)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~-~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~  170 (226)
                      ++||++|... ..+..+.+.++|.+++++|+.+++.+.+.+++.+++ .+++|++||..+..+.++...|+.+|++++++
T Consensus        74 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~~~~y~~~K~a~~~~  152 (227)
T PRK08219         74 VLVHNAGVAD-LGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAHGHVVFINSGAGLRANPGWGSYAASKFALRAL  152 (227)
T ss_pred             EEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEcchHhcCcCCCCchHHHHHHHHHHH
Confidence            9999999865 456677888999999999999999999999998865 57999999999888888899999999999999


Q ss_pred             HHHHHHHhCCCeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          171 TKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       171 ~~~la~e~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ++.++.++...|++++++||+++|++.........  ......++..|+|+|+++
T Consensus       153 ~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~--~~~~~~~~~~~~dva~~~  205 (227)
T PRK08219        153 ADALREEEPGNVRVTSVHPGRTDTDMQRGLVAQEG--GEYDPERYLRPETVAKAV  205 (227)
T ss_pred             HHHHHHHhcCCceEEEEecCCccchHhhhhhhhhc--cccCCCCCCCHHHHHHHH
Confidence            99999886544999999999999986554322111  112334578899998764

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.96  E-value=7.5e-29  Score=199.51  Aligned_cols=175  Identities=21%  Similarity=0.221  Sum_probs=142.9

Q ss_pred             HHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCccc
Q 027248           28 IAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSIL  107 (226)
Q Consensus        28 ~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~li~nag~~~~~~~~~  107 (226)
                      ++++|+++|++|++++|++++.+.           ..++++|+++.++++++++++.   +++|+||||||...      
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~~-----------~~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~~------   60 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMTL-----------DGFIQADLGDPASIDAAVAALP---GRIDALFNIAGVPG------   60 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhhh-----------hHhhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCCC------
Confidence            478999999999999999876421           2357899999999999988764   68999999999753      


Q ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcC---------------------------CCCCCchh
Q 027248          108 QTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ---------------------------PQSSMAMY  160 (226)
Q Consensus       108 ~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~---------------------------~~~~~~~Y  160 (226)
                         .++|++++++|+.+++.+++.++|+|+++++||++||.++..                           +.++...|
T Consensus        61 ---~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y  137 (241)
T PRK12428         61 ---TAPVELVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGY  137 (241)
T ss_pred             ---CCCHHHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHH
Confidence               135789999999999999999999998779999999998762                           55678899


Q ss_pred             hHhHHHHHHHHHHHH-HHhCC-CeEEEEEecCceeCCcccccccCc--h-hh-hhhccCCCCCchhhhccc
Q 027248          161 GVTKTALLGLTKALA-AEMAP-DTRVNCVAPGFVPTHFAEYITSND--G-VV-SSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       161 ~~sKaa~~~~~~~la-~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~--~-~~-~~~~~~~~~~p~~~a~av  225 (226)
                      ++||+|+++|++.++ .|+.+ ||+||+|+||+++|+|.+......  . .. ...+..++.+|+|+|+++
T Consensus       138 ~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~  208 (241)
T PRK12428        138 QLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLGQERVDSDAKRMGRPATADEQAAVL  208 (241)
T ss_pred             HHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccchhhhhhHhhhhcccccCCCCCHHHHHHHH
Confidence            999999999999999 99988 999999999999999976543211  1 11 122345678999999875

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.95  E-value=6.8e-27  Score=231.98  Aligned_cols=183  Identities=17%  Similarity=0.193  Sum_probs=160.6

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhC-CCeEEEEecCcc------------------------------------------
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLE-GASVVVSSRKQK------------------------------------------   47 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~-g~~v~~~~r~~~------------------------------------------   47 (226)
                      +|+++|||||++|||++++++|+++ |++|++++|+..                                          
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            5899999999999999999999998 699999999820                                          


Q ss_pred             -----hHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHH
Q 027248           48 -----NVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINV  122 (226)
Q Consensus        48 -----~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~  122 (226)
                           ......+++.+.+.++.++.+|++|.++++++++++.+. +++|+||||||+.. .+.+.+.+.++|++++++|+
T Consensus      2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~-~~~i~~~t~e~f~~v~~~nv 2153 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLA-DKHIQDKTLEEFNAVYGTKV 2153 (2582)
T ss_pred             cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCC-CCCcccCCHHHHHHHHHHHH
Confidence                 111223344455778889999999999999999999877 68999999999876 57889999999999999999


Q ss_pred             HHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCccc
Q 027248          123 KSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAE  198 (226)
Q Consensus       123 ~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~~  198 (226)
                      .|.+++.+++.+.+.  ++||++||..+..+.++++.|+++|++++.+++.++.++. +++|++|+||+++|+|..
T Consensus      2154 ~G~~~Ll~al~~~~~--~~IV~~SSvag~~G~~gqs~YaaAkaaL~~la~~la~~~~-~irV~sI~wG~wdtgm~~ 2226 (2582)
T TIGR02813      2154 DGLLSLLAALNAENI--KLLALFSSAAGFYGNTGQSDYAMSNDILNKAALQLKALNP-SAKVMSFNWGPWDGGMVN 2226 (2582)
T ss_pred             HHHHHHHHHHHHhCC--CeEEEEechhhcCCCCCcHHHHHHHHHHHHHHHHHHHHcC-CcEEEEEECCeecCCccc
Confidence            999999999987654  3799999999999999999999999999999999999864 599999999999999864

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.95  E-value=1.5e-26  Score=197.43  Aligned_cols=185  Identities=18%  Similarity=0.214  Sum_probs=140.8

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      ..++||+++||||+||||++++++|+++|++|++++|++++++..   .......+..+.+|+++++++.+.       +
T Consensus       174 ~sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~---~~~~~~~v~~v~~Dvsd~~~v~~~-------l  243 (406)
T PRK07424        174 LSLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLE---INGEDLPVKTLHWQVGQEAALAEL-------L  243 (406)
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HhhcCCCeEEEEeeCCCHHHHHHH-------h
Confidence            457899999999999999999999999999999999987655432   222233466788999999886554       3


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcC------CEEEEEeccCCcCCCCCCchhh
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKG------SSVVLISSIAGYQPQSSMAMYG  161 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~------~~iv~~sS~~~~~~~~~~~~Y~  161 (226)
                      +++|++|||||...    ..+.+.+++++++++|+.|++.++++++|.|++.      +.+|++|| +. ...+..+.|+
T Consensus       244 ~~IDiLInnAGi~~----~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~-~~~~~~~~Y~  317 (406)
T PRK07424        244 EKVDILIINHGINV----HGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AE-VNPAFSPLYE  317 (406)
T ss_pred             CCCCEEEECCCcCC----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-cc-ccCCCchHHH
Confidence            58999999999753    2357889999999999999999999999999542      23555554 33 3334567899


Q ss_pred             HhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhcc
Q 027248          162 VTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLA  224 (226)
Q Consensus       162 ~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~a  224 (226)
                      +||+|+..++. ++++.. ++.+..+.||+++|++..              ....+|+++|+.
T Consensus       318 ASKaAl~~l~~-l~~~~~-~~~I~~i~~gp~~t~~~~--------------~~~~spe~vA~~  364 (406)
T PRK07424        318 LSKRALGDLVT-LRRLDA-PCVVRKLILGPFKSNLNP--------------IGVMSADWVAKQ  364 (406)
T ss_pred             HHHHHHHHHHH-HHHhCC-CCceEEEEeCCCcCCCCc--------------CCCCCHHHHHHH
Confidence            99999999985 444422 566667889999988632              124677887765

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.94  E-value=2.2e-25  Score=169.69  Aligned_cols=175  Identities=21%  Similarity=0.219  Sum_probs=149.5

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHH---HHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEA---VVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~---~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      |+++||||++|||++++++|+++|+ .|++++|+++..+..   .+++.+.+.++..+.+|++++++++.+++++.+.++
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG   80 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            5799999999999999999999997 588888887654432   245555567788899999999999999999988889


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHhHHHHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALL  168 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~  168 (226)
                      ++|++|||+|... ..+..+.+.++|++++++|+.+++.+.+++.+.  +.++++++||..+..+.++...|+++|++++
T Consensus        81 ~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~ii~~ss~~~~~~~~~~~~y~~sk~~~~  157 (180)
T smart00822       81 PLRGVIHAAGVLD-DGLLANLTPERFAAVLAPKVDGAWNLHELTRDL--PLDFFVLFSSVAGVLGNPGQANYAAANAFLD  157 (180)
T ss_pred             CeeEEEEccccCC-ccccccCCHHHHHHhhchHhHHHHHHHHHhccC--CcceEEEEccHHHhcCCCCchhhHHHHHHHH
Confidence            9999999999865 456678888999999999999999999998553  3468999999998888899999999999999


Q ss_pred             HHHHHHHHHhCCCeEEEEEecCcee
Q 027248          169 GLTKALAAEMAPDTRVNCVAPGFVP  193 (226)
Q Consensus       169 ~~~~~la~e~~~~i~v~~v~Pg~v~  193 (226)
                      .+++.++.+   ++++.++.||+++
T Consensus       158 ~~~~~~~~~---~~~~~~~~~g~~~  179 (180)
T smart00822      158 ALAAHRRAR---GLPATSINWGAWA  179 (180)
T ss_pred             HHHHHHHhc---CCceEEEeecccc
Confidence            999876544   7789999999864

It uses NADPH to reduce the keto group to a hydroxy group.

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.92  E-value=6e-24  Score=165.52  Aligned_cols=191  Identities=24%  Similarity=0.292  Sum_probs=165.8

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCC-----eEEEEecCcchHHHHHHHHHhcCC----cEEEEEeeCCCHHHHHHHHHHH
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGA-----SVVVSSRKQKNVDEAVVKLKARGI----EVIGVVCHVSNGQQRKNLINQT   83 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~-----~v~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~Dv~~~~~v~~~~~~~   83 (226)
                      |+++|||+++|||++++++|++...     ++++++|+-++.++.+..+.+..+    ++.++..|+++..++..+..++
T Consensus         4 KvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~di   83 (341)
T KOG1478|consen    4 KVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKDI   83 (341)
T ss_pred             eEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHHH
Confidence            8999999999999999999998653     378899999999999999988765    5778999999999999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCC--------------------------ccccccHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 027248           84 IEKFGKIDVVVSNAAANPSVD--------------------------SILQTKESVLDKLWDINVKSSILLLQDAAPHLQ  137 (226)
Q Consensus        84 ~~~~~~id~li~nag~~~~~~--------------------------~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~  137 (226)
                      .++|.++|.+..|||++...+                          .....+.|++.++++.|++|+|.+.+.+.|++.
T Consensus        84 ~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pll~  163 (341)
T KOG1478|consen   84 KQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPLLC  163 (341)
T ss_pred             HHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhHhh
Confidence            999999999999999875111                          134567789999999999999999999999984


Q ss_pred             c--CCEEEEEeccCCc---------CCCCCCchhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC
Q 027248          138 K--GSSVVLISSIAGY---------QPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN  203 (226)
Q Consensus       138 ~--~~~iv~~sS~~~~---------~~~~~~~~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~  203 (226)
                      .  ...+|++||..+.         ....+-.+|..||.+.+-+.-++-+.+.+ |+.-+.++||..-|.+...+...
T Consensus       164 ~~~~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~~~~~~l~~  241 (341)
T KOG1478|consen  164 HSDNPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTNSFSEYLNP  241 (341)
T ss_pred             cCCCCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecchhhhhhhh
Confidence            3  4589999999875         22456778999999999999999999999 99999999999999887776544

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.91  E-value=6.3e-23  Score=179.63  Aligned_cols=197  Identities=15%  Similarity=0.127  Sum_probs=149.0

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhc-----C----CcEEEEEeeCCCHHHHHHHH
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-----G----IEVIGVVCHVSNGQQRKNLI   80 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-----~----~~~~~~~~Dv~~~~~v~~~~   80 (226)
                      ..||+++||||+|+||++++++|+++|++|++++|+.++++...+++.+.     +    .++.++.+|+++.+++++. 
T Consensus        78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~a-  156 (576)
T PLN03209         78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPA-  156 (576)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHH-
Confidence            46899999999999999999999999999999999998887766655331     1    2478899999999887553 


Q ss_pred             HHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCc-CCCCCCch
Q 027248           81 NQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY-QPQSSMAM  159 (226)
Q Consensus        81 ~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~-~~~~~~~~  159 (226)
                            ++.+|+||||+|...  .     ...+|...+++|+.|..++++++...  +.++||++||.++. .+.+.. .
T Consensus       157 ------LggiDiVVn~AG~~~--~-----~v~d~~~~~~VN~~Gt~nLl~Aa~~a--gVgRIV~VSSiga~~~g~p~~-~  220 (576)
T PLN03209        157 ------LGNASVVICCIGASE--K-----EVFDVTGPYRIDYLATKNLVDAATVA--KVNHFILVTSLGTNKVGFPAA-I  220 (576)
T ss_pred             ------hcCCCEEEEcccccc--c-----cccchhhHHHHHHHHHHHHHHHHHHh--CCCEEEEEccchhcccCcccc-c
Confidence                  458999999999753  1     12357888999999999999998764  34699999998763 222222 2


Q ss_pred             hhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchh---hhhhccCCCCCchhhhccc
Q 027248          160 YGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGV---VSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       160 Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~---~~~~~~~~~~~p~~~a~av  225 (226)
                      |. +|+++..+.+.+..++.. ||+++.|+||+++|++.... ....+   .......+.+.++|||+++
T Consensus       221 ~~-sk~~~~~~KraaE~~L~~sGIrvTIVRPG~L~tp~d~~~-~t~~v~~~~~d~~~gr~isreDVA~vV  288 (576)
T PLN03209        221 LN-LFWGVLCWKRKAEEALIASGLPYTIVRPGGMERPTDAYK-ETHNLTLSEEDTLFGGQVSNLQVAELM  288 (576)
T ss_pred             hh-hHHHHHHHHHHHHHHHHHcCCCEEEEECCeecCCccccc-cccceeeccccccCCCccCHHHHHHHH
Confidence            44 788888888888888877 99999999999998864321 11111   1113345668889998764

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.91  E-value=9.2e-23  Score=170.94  Aligned_cols=167  Identities=20%  Similarity=0.163  Sum_probs=133.7

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCC--CeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEG--ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      ++||+++||||+|+||++++++|+++|  ++|++++|+..+.......+.  ..++.++.+|++|++.+.++++      
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~l~~~~~------   73 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFP--APCLRFFIGDVRDKERLTRALR------   73 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhC--CCcEEEEEccCCCHHHHHHHHh------
Confidence            468999999999999999999999986  689999998765444333332  2467889999999998877665      


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHhHHHH
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~  167 (226)
                       .+|+|||+||...  .+..+.+   ..+++++|+.|++++++++.+.  ..++||++||.....   +.+.|++||++.
T Consensus        74 -~iD~Vih~Ag~~~--~~~~~~~---~~~~~~~Nv~g~~~ll~aa~~~--~~~~iV~~SS~~~~~---p~~~Y~~sK~~~  142 (324)
T TIGR03589        74 -GVDYVVHAAALKQ--VPAAEYN---PFECIRTNINGAQNVIDAAIDN--GVKRVVALSTDKAAN---PINLYGATKLAS  142 (324)
T ss_pred             -cCCEEEECcccCC--CchhhcC---HHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEeCCCCCC---CCCHHHHHHHHH
Confidence             6899999999753  1222222   3578999999999999999874  235899999976543   356799999999


Q ss_pred             HHHHHHHHHHhCC-CeEEEEEecCceeCC
Q 027248          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTH  195 (226)
Q Consensus       168 ~~~~~~la~e~~~-~i~v~~v~Pg~v~t~  195 (226)
                      +.+++.++.+... |++++++.||.+..|
T Consensus       143 E~l~~~~~~~~~~~gi~~~~lR~g~v~G~  171 (324)
T TIGR03589       143 DKLFVAANNISGSKGTRFSVVRYGNVVGS  171 (324)
T ss_pred             HHHHHHHHhhccccCcEEEEEeecceeCC
Confidence            9999999887776 999999999999875

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.91  E-value=1.9e-22  Score=168.63  Aligned_cols=187  Identities=20%  Similarity=0.179  Sum_probs=146.2

Q ss_pred             CCCEEEEEcCCCchhHH--HHHHHHhCCCeEEEEecCcchH------------HHHHHHHHhcCCcEEEEEeeCCCHHHH
Q 027248           11 QGKVAIVTASTQGIGFG--IAERLGLEGASVVVSSRKQKNV------------DEAVVKLKARGIEVIGVVCHVSNGQQR   76 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a--~~~~l~~~g~~v~~~~r~~~~~------------~~~~~~~~~~~~~~~~~~~Dv~~~~~v   76 (226)
                      .||++||||+++|||.+  +++.| +.|++++++++..++.            +...+.+.+.+..+..+.||+++++++
T Consensus        40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v  118 (398)
T PRK13656         40 GPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIK  118 (398)
T ss_pred             CCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHH
Confidence            47999999999999999  89999 9999988888643222            123344445466677899999999999


Q ss_pred             HHHHHHHHHHhCCCCEEEEcCCCCCCCCc---------------------------------cccccHHHHHHHHHHHHH
Q 027248           77 KNLINQTIEKFGKIDVVVSNAAANPSVDS---------------------------------ILQTKESVLDKLWDINVK  123 (226)
Q Consensus        77 ~~~~~~~~~~~~~id~li~nag~~~~~~~---------------------------------~~~~~~~~~~~~~~~N~~  123 (226)
                      +++++++.+.+|++|+||||+|...+..+                                 +...+.++++.+.  +++
T Consensus       119 ~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~Tv--~vM  196 (398)
T PRK13656        119 QKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADTV--KVM  196 (398)
T ss_pred             HHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHHH--Hhh
Confidence            99999999999999999999998742111                                 1123344555443  344


Q ss_pred             HH---HHH--HHHHhhhhhcCCEEEEEeccCCcCCCCCC--chhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCC
Q 027248          124 SS---ILL--LQDAAPHLQKGSSVVLISSIAGYQPQSSM--AMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTH  195 (226)
Q Consensus       124 ~~---~~~--~~~~~~~l~~~~~iv~~sS~~~~~~~~~~--~~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~  195 (226)
                      |.   ...  .....++|.+++++|.+|...+....|.+  ..-+.+|++|+.-+|.|+.++++ |||+|++.+|.+.|.
T Consensus       197 ggedw~~Wi~al~~a~lla~g~~~va~TY~G~~~t~p~Y~~g~mG~AKa~LE~~~r~La~~L~~~giran~i~~g~~~T~  276 (398)
T PRK13656        197 GGEDWELWIDALDEAGVLAEGAKTVAYSYIGPELTHPIYWDGTIGKAKKDLDRTALALNEKLAAKGGDAYVSVLKAVVTQ  276 (398)
T ss_pred             ccchHHHHHHHHHhcccccCCcEEEEEecCCcceeecccCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccch
Confidence            44   223  33445677888999999999988888877  58999999999999999999999 999999999999997


Q ss_pred             ccccc
Q 027248          196 FAEYI  200 (226)
Q Consensus       196 ~~~~~  200 (226)
                      -...+
T Consensus       277 Ass~I  281 (398)
T PRK13656        277 ASSAI  281 (398)
T ss_pred             hhhcC
Confidence            55444

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.91  E-value=1e-22  Score=157.00  Aligned_cols=173  Identities=20%  Similarity=0.250  Sum_probs=138.7

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCc---chHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           14 VAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQ---KNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      ++|||||.||||..+++.|+++|. ++++++|+.   ...+...+++.+.+.++.++.+|++|+++++++++++.+.+++
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~   81 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP   81 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence            689999999999999999999985 699999992   3455678888888999999999999999999999999999999


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHhHHHHHH
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLG  169 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~  169 (226)
                      +|.+||.||... ..++.+.+.++++.++...+.|..++.+.+.+.  +-..+|.+||.++..+.++.+.|+++.+.++.
T Consensus        82 i~gVih~ag~~~-~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~--~l~~~i~~SSis~~~G~~gq~~YaaAN~~lda  158 (181)
T PF08659_consen   82 IDGVIHAAGVLA-DAPIQDQTPDEFDAVLAPKVRGLWNLHEALENR--PLDFFILFSSISSLLGGPGQSAYAAANAFLDA  158 (181)
T ss_dssp             EEEEEE--------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTT--TTSEEEEEEEHHHHTT-TTBHHHHHHHHHHHH
T ss_pred             cceeeeeeeeec-ccccccCCHHHHHHHHhhhhhHHHHHHHHhhcC--CCCeEEEECChhHhccCcchHhHHHHHHHHHH
Confidence            999999999976 678899999999999999999999999988763  33589999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCeEEEEEecCce
Q 027248          170 LTKALAAEMAPDTRVNCVAPGFV  192 (226)
Q Consensus       170 ~~~~la~e~~~~i~v~~v~Pg~v  192 (226)
                      |++..+..   +..+.+|..|..
T Consensus       159 ~a~~~~~~---g~~~~sI~wg~W  178 (181)
T PF08659_consen  159 LARQRRSR---GLPAVSINWGAW  178 (181)
T ss_dssp             HHHHHHHT---TSEEEEEEE-EB
T ss_pred             HHHHHHhC---CCCEEEEEcccc
Confidence            99976654   556777776643

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.89  E-value=1.1e-21  Score=166.09  Aligned_cols=175  Identities=18%  Similarity=0.113  Sum_probs=138.3

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      ++||+++||||+|+||.++++.|+++|++|++++|+..........+. ...++.++.+|+++.+++.++++..     +
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~-----~   75 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLN-LAKKIEDHFGDIRDAAKLRKAIAEF-----K   75 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHh-hcCCceEEEccCCCHHHHHHHHhhc-----C
Confidence            468999999999999999999999999999999998775544333332 2335677899999999988887753     6


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcC------------CCCCC
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ------------PQSSM  157 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~------------~~~~~  157 (226)
                      +|+|||+||....     ..+.+++...+++|+.+++++++++... ...+++|++||...+.            +..+.
T Consensus        76 ~d~vih~A~~~~~-----~~~~~~~~~~~~~N~~g~~~ll~a~~~~-~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p~  149 (349)
T TIGR02622        76 PEIVFHLAAQPLV-----RKSYADPLETFETNVMGTVNLLEAIRAI-GSVKAVVNVTSDKCYRNDEWVWGYRETDPLGGH  149 (349)
T ss_pred             CCEEEECCccccc-----ccchhCHHHHHHHhHHHHHHHHHHHHhc-CCCCEEEEEechhhhCCCCCCCCCccCCCCCCC
Confidence            9999999995421     2345667888999999999999988642 2235899999964331            12346


Q ss_pred             chhhHhHHHHHHHHHHHHHHhCC-----CeEEEEEecCceeCCc
Q 027248          158 AMYGVTKTALLGLTKALAAEMAP-----DTRVNCVAPGFVPTHF  196 (226)
Q Consensus       158 ~~Y~~sKaa~~~~~~~la~e~~~-----~i~v~~v~Pg~v~t~~  196 (226)
                      ..|+.||++.+.+++.++.++.+     +++++.+.|+.+..|.
T Consensus       150 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~  193 (349)
T TIGR02622       150 DPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGG  193 (349)
T ss_pred             CcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCC
Confidence            78999999999999999988743     8999999999988763

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK06720 hypothetical protein; Provisional

Probab=99.89  E-value=1.1e-21  Score=149.17  Aligned_cols=143  Identities=22%  Similarity=0.276  Sum_probs=118.8

Q ss_pred             cccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus         6 ~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      |.+.++||+++||||++|||++++++|++.|++|++++|+.+..+...+++...+.+..++.+|+++.++++++++++.+
T Consensus        10 ~~~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~   89 (169)
T PRK06720         10 MKMKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLN   89 (169)
T ss_pred             cccccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            44567899999999999999999999999999999999998887777777776666777889999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc---------CCEEEEEeccCCc
Q 027248           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---------GSSVVLISSIAGY  151 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~---------~~~iv~~sS~~~~  151 (226)
                      .+|++|++|||||+.....++.+.+.++ ++  .+|+.+.+..++.+.++|.+         .||+..+||.+..
T Consensus        90 ~~G~iDilVnnAG~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (169)
T PRK06720         90 AFSRIDMLFQNAGLYKIDSIFSRQQEND-SN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQS  161 (169)
T ss_pred             HcCCCCEEEECCCcCCCCCcccccchhH-hh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEecccccc
Confidence            9999999999999876455665555555 33  66777888899999888743         3677778877654

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.88  E-value=5.4e-21  Score=160.13  Aligned_cols=172  Identities=19%  Similarity=0.151  Sum_probs=135.5

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      .||+++||||+|+||++++++|+++|++|++++|+.+..+.........  ..++.++.+|+++.++++++++       
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   76 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID-------   76 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc-------
Confidence            4799999999999999999999999999999999887654432222211  2357888999999998887765       


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCC-------------
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQS-------------  155 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~-------------  155 (226)
                      .+|+|||+||....     ..+.+++.+.+++|+.+++++++++.+.+. .++||++||..+..+..             
T Consensus        77 ~~d~vih~A~~~~~-----~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~-~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~  150 (325)
T PLN02989         77 GCETVFHTASPVAI-----TVKTDPQVELINPAVNGTINVLRTCTKVSS-VKRVILTSSMAAVLAPETKLGPNDVVDETF  150 (325)
T ss_pred             CCCEEEEeCCCCCC-----CCCCChHHHHHHHHHHHHHHHHHHHHHcCC-ceEEEEecchhheecCCccCCCCCccCcCC
Confidence            68999999996431     233456789999999999999999988642 35899999986542210             


Q ss_pred             ---------CCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCcc
Q 027248          156 ---------SMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFA  197 (226)
Q Consensus       156 ---------~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~  197 (226)
                               ....|+.||.+.+.+++.+..++  ++++..+.|+.+..|..
T Consensus       151 ~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~vyGp~~  199 (325)
T PLN02989        151 FTNPSFAEERKQWYVLSKTLAEDAAWRFAKDN--EIDLIVLNPGLVTGPIL  199 (325)
T ss_pred             CCchhHhcccccchHHHHHHHHHHHHHHHHHc--CCeEEEEcCCceeCCCC
Confidence                     12469999999999999887765  78899999999988754

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.86  E-value=1.7e-20  Score=158.16  Aligned_cols=175  Identities=19%  Similarity=0.092  Sum_probs=130.8

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHH-HHHHHHH----hcCCcEEEEEeeCCCHHHHHHHHHH
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVD-EAVVKLK----ARGIEVIGVVCHVSNGQQRKNLINQ   82 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~-~~~~~~~----~~~~~~~~~~~Dv~~~~~v~~~~~~   82 (226)
                      .+++||+++||||+|+||.+++++|+++|++|++++|+.+... ...+.+.    ..+.++.++.+|+++.++++.+++.
T Consensus         2 ~~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   81 (340)
T PLN02653          2 GDPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDD   81 (340)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHH
Confidence            4678999999999999999999999999999999998764321 1112211    1234578899999999999888876


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCC---EEEEEeccCCcCC------
Q 027248           83 TIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGS---SVVLISSIAGYQP------  153 (226)
Q Consensus        83 ~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~---~iv~~sS~~~~~~------  153 (226)
                      .     .+|+|||+||....     ..+.++....+++|+.|+.++++++.+...+.+   ++|++||.+.+..      
T Consensus        82 ~-----~~d~Vih~A~~~~~-----~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~  151 (340)
T PLN02653         82 I-----KPDEVYNLAAQSHV-----AVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPPQS  151 (340)
T ss_pred             c-----CCCEEEECCcccch-----hhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCCCC
Confidence            4     69999999997531     122344577789999999999999998865433   7888887643321      


Q ss_pred             ----CCCCchhhHhHHHHHHHHHHHHHHhCC----CeEEEEEecCce
Q 027248          154 ----QSSMAMYGVTKTALLGLTKALAAEMAP----DTRVNCVAPGFV  192 (226)
Q Consensus       154 ----~~~~~~Y~~sKaa~~~~~~~la~e~~~----~i~v~~v~Pg~v  192 (226)
                          ..+...|+.||.+.+.+++.++.++..    ++.++.+.|+..
T Consensus       152 E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~  198 (340)
T PLN02653        152 ETTPFHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRG  198 (340)
T ss_pred             CCCCCCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCC
Confidence                124668999999999999999988742    345566667643

>PLN02583 cinnamoyl-CoA reductase

Probab=99.85  E-value=1e-19  Score=150.72  Aligned_cols=171  Identities=16%  Similarity=0.103  Sum_probs=128.1

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcch--HHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN--VDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      -++|+++||||+|+||++++++|+++|++|+++.|+.+.  ......++...+.++.++.+|+++.+++.+++.      
T Consensus         4 ~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~------   77 (297)
T PLN02583          4 ESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALK------   77 (297)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHc------
Confidence            357899999999999999999999999999999996432  222223332223467788999999998766554      


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCC---C---------
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQ---S---------  155 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~---~---------  155 (226)
                       ..|.++|.++...   .   . ..++++++++|+.|++++++++.+.+ .-++||++||.++....   +         
T Consensus        78 -~~d~v~~~~~~~~---~---~-~~~~~~~~~~nv~gt~~ll~aa~~~~-~v~riV~~SS~~a~~~~~~~~~~~~~~~E~  148 (297)
T PLN02583         78 -GCSGLFCCFDPPS---D---Y-PSYDEKMVDVEVRAAHNVLEACAQTD-TIEKVVFTSSLTAVIWRDDNISTQKDVDER  148 (297)
T ss_pred             -CCCEEEEeCccCC---c---c-cccHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEecchHheecccccCCCCCCCCcc
Confidence             6889988765322   1   1 12467899999999999999998864 13589999998654211   0         


Q ss_pred             --C--------CchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCcc
Q 027248          156 --S--------MAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFA  197 (226)
Q Consensus       156 --~--------~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~  197 (226)
                        .        ...|+.||...+.++..++.+.  +++++.++|+++..|..
T Consensus       149 ~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~~--gi~~v~lrp~~v~Gp~~  198 (297)
T PLN02583        149 SWSDQNFCRKFKLWHALAKTLSEKTAWALAMDR--GVNMVSINAGLLMGPSL  198 (297)
T ss_pred             cCCCHHHHhhcccHHHHHHHHHHHHHHHHHHHh--CCcEEEEcCCcccCCCC
Confidence              0        0159999999999888776653  89999999999988754

>PLN02650 dihydroflavonol-4-reductase

Probab=99.84  E-value=1.6e-19  Score=152.82  Aligned_cols=171  Identities=19%  Similarity=0.115  Sum_probs=131.0

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      ..|+++||||+|.||.+++++|+++|++|++++|+.+............  ..++.++.+|+++.+.++++++       
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~-------   76 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR-------   76 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh-------
Confidence            4589999999999999999999999999999999876655443322211  1357788999999998877665       


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCC----C---------
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQ----S---------  155 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~----~---------  155 (226)
                      .+|++||+|+... ..   .  .+.+.+.+++|+.+++++++++.+... .++||++||.....+.    +         
T Consensus        77 ~~d~ViH~A~~~~-~~---~--~~~~~~~~~~Nv~gt~~ll~aa~~~~~-~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~  149 (351)
T PLN02650         77 GCTGVFHVATPMD-FE---S--KDPENEVIKPTVNGMLSIMKACAKAKT-VRRIVFTSSAGTVNVEEHQKPVYDEDCWSD  149 (351)
T ss_pred             CCCEEEEeCCCCC-CC---C--CCchhhhhhHHHHHHHHHHHHHHhcCC-ceEEEEecchhhcccCCCCCCccCcccCCc
Confidence            6899999998643 11   1  122367889999999999999987531 2489999998543210    0         


Q ss_pred             ---------CCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCcc
Q 027248          156 ---------SMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFA  197 (226)
Q Consensus       156 ---------~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~  197 (226)
                               +...|+.||.+.+.+++.++.++  +++++.+.|+.+..|..
T Consensus       150 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--gi~~~ilRp~~v~Gp~~  198 (351)
T PLN02650        150 LDFCRRKKMTGWMYFVSKTLAEKAAWKYAAEN--GLDFISIIPTLVVGPFI  198 (351)
T ss_pred             hhhhhccccccchHHHHHHHHHHHHHHHHHHc--CCeEEEECCCceECCCC
Confidence                     12379999999999999988775  79999999999988854

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.84  E-value=2.8e-19  Score=151.55  Aligned_cols=176  Identities=19%  Similarity=0.083  Sum_probs=133.6

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      .++++++||||+|.||.+++++|+++|++|++++|+.++.+.....+.. +.++.++.+|+++.+.++++++       .
T Consensus         8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~-------~   79 (353)
T PLN02896          8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKE-GDRLRLFRADLQEEGSFDEAVK-------G   79 (353)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhcc-CCeEEEEECCCCCHHHHHHHHc-------C
Confidence            4678999999999999999999999999999999987665555444432 3567889999999998877664       6


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHH--HHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCC-------------
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVL--DKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQ-------------  154 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~--~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~-------------  154 (226)
                      +|+|||+|+...........+.+++  ..++++|+.+++++++++.... ..+++|++||.+.+...             
T Consensus        80 ~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~-~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~  158 (353)
T PLN02896         80 CDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK-TVKRVVFTSSISTLTAKDSNGRWRAVVDET  158 (353)
T ss_pred             CCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC-CccEEEEEechhhccccccCCCCCCccCcc
Confidence            8999999997642211122233333  5677888999999999987653 13589999997654211             


Q ss_pred             ------------CCCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCc
Q 027248          155 ------------SSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHF  196 (226)
Q Consensus       155 ------------~~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~  196 (226)
                                  +..+.|+.||.+.+.+++.++.++  ++++..+.|+.+..|.
T Consensus       159 ~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~lR~~~vyGp~  210 (353)
T PLN02896        159 CQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKEN--GIDLVSVITTTVAGPF  210 (353)
T ss_pred             cCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHc--CCeEEEEcCCcccCCC
Confidence                        122379999999999999887765  7899999998887774

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.84  E-value=4e-19  Score=149.66  Aligned_cols=171  Identities=17%  Similarity=0.081  Sum_probs=130.0

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHH--HHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVV--KLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~--~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      .+++|+++||||+|+||++++++|+++|++|+++.|+.+.......  .+. ...++.++.+|+++++++.++++     
T Consensus         6 ~~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~-----   79 (338)
T PLN00198          6 PTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQ-ELGDLKIFGADLTDEESFEAPIA-----   79 (338)
T ss_pred             CCCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcC-CCCceEEEEcCCCChHHHHHHHh-----
Confidence            3568999999999999999999999999999989888765433221  111 11357788999999988777654     


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCC-------------
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP-------------  153 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~-------------  153 (226)
                        .+|+|||+|+...    ..  ..+.+.+.+++|+.++.++++++.... ..+++|++||.+.+..             
T Consensus        80 --~~d~vih~A~~~~----~~--~~~~~~~~~~~nv~g~~~ll~a~~~~~-~~~~~v~~SS~~~~g~~~~~~~~~~~~E~  150 (338)
T PLN00198         80 --GCDLVFHVATPVN----FA--SEDPENDMIKPAIQGVHNVLKACAKAK-SVKRVILTSSAAAVSINKLSGTGLVMNEK  150 (338)
T ss_pred             --cCCEEEEeCCCCc----cC--CCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEeecceeeeccCCCCCCceeccc
Confidence              6899999998532    11  112345678999999999999987642 2358999999865421             


Q ss_pred             -----------CCCCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCc
Q 027248          154 -----------QSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHF  196 (226)
Q Consensus       154 -----------~~~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~  196 (226)
                                 .++...|+.||.+.+.+++.++.++  ++++..+.|+.+..|.
T Consensus       151 ~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~R~~~vyGp~  202 (338)
T PLN00198        151 NWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEEN--NIDLITVIPTLMAGPS  202 (338)
T ss_pred             cCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHhc--CceEEEEeCCceECCC
Confidence                       1235579999999999999887764  7889999999888774

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.84  E-value=3e-19  Score=149.42  Aligned_cols=172  Identities=19%  Similarity=0.155  Sum_probs=131.5

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      -+||+++||||+|+||.+++++|+++|++|+++.|+.+..+.........  ..++.++.+|+++++.++++++      
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   76 (322)
T PLN02986          3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE------   76 (322)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh------
Confidence            46899999999999999999999999999999999877654433222211  2357889999999998877776      


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcC-CC------------
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ-PQ------------  154 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~-~~------------  154 (226)
                       .+|++||+|+... .. .    .+.+.+.+++|+.|+.++++++.... .-++||++||.++.. +.            
T Consensus        77 -~~d~vih~A~~~~-~~-~----~~~~~~~~~~nv~gt~~ll~~~~~~~-~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~  148 (322)
T PLN02986         77 -GCDAVFHTASPVF-FT-V----KDPQTELIDPALKGTINVLNTCKETP-SVKRVILTSSTAAVLFRQPPIEANDVVDET  148 (322)
T ss_pred             -CCCEEEEeCCCcC-CC-C----CCchhhhhHHHHHHHHHHHHHHHhcC-CccEEEEecchhheecCCccCCCCCCcCcc
Confidence             6899999999643 11 1    12235678999999999999886531 124899999986431 10            


Q ss_pred             ----C-----CCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCcc
Q 027248          155 ----S-----SMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFA  197 (226)
Q Consensus       155 ----~-----~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~  197 (226)
                          |     ....|+.||.+.+.+++.+..++  +++++.+.|+.+..|..
T Consensus       149 ~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~--~~~~~~lrp~~v~Gp~~  198 (322)
T PLN02986        149 FFSDPSLCRETKNWYPLSKILAENAAWEFAKDN--GIDMVVLNPGFICGPLL  198 (322)
T ss_pred             cCCChHHhhccccchHHHHHHHHHHHHHHHHHh--CCeEEEEcccceeCCCC
Confidence                0     13569999999999998887765  79999999999998864

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.83  E-value=1.1e-18  Score=151.73  Aligned_cols=179  Identities=16%  Similarity=0.115  Sum_probs=132.3

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchH----------------HHHHHHHH-hcCCcEEEEEeeC
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNV----------------DEAVVKLK-ARGIEVIGVVCHV   70 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~----------------~~~~~~~~-~~~~~~~~~~~Dv   70 (226)
                      ..+++|+++||||+|+||++++++|+++|++|++++|.....                ....+.+. ..+.++.++.+|+
T Consensus        43 ~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl  122 (442)
T PLN02572         43 SSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDI  122 (442)
T ss_pred             ccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCC
Confidence            457789999999999999999999999999999987532110                01111111 1133578899999


Q ss_pred             CCHHHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCC
Q 027248           71 SNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG  150 (226)
Q Consensus        71 ~~~~~v~~~~~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~  150 (226)
                      ++.+.++++++..     ++|+|||+|+...  ......+.++++..+++|+.|++++++++...-. ..++|++||...
T Consensus       123 ~d~~~v~~~l~~~-----~~D~ViHlAa~~~--~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv-~~~~V~~SS~~v  194 (442)
T PLN02572        123 CDFEFLSEAFKSF-----EPDAVVHFGEQRS--APYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAP-DCHLVKLGTMGE  194 (442)
T ss_pred             CCHHHHHHHHHhC-----CCCEEEECCCccc--ChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCC-CccEEEEeccee
Confidence            9999988888753     7999999997643  3334455566788899999999999999876421 137999999864


Q ss_pred             cC------------------------CCCCCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCc
Q 027248          151 YQ------------------------PQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHF  196 (226)
Q Consensus       151 ~~------------------------~~~~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~  196 (226)
                      +.                        +..+...|+.||.+.+.+++.++..+  |+.+..+.|+.+.-|.
T Consensus       195 YG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~--gl~~v~lR~~~vyGp~  262 (442)
T PLN02572        195 YGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW--GIRATDLNQGVVYGVR  262 (442)
T ss_pred             cCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhc--CCCEEEEecccccCCC
Confidence            31                        11234579999999999998877664  7888888888876653

>PLN02214 cinnamoyl-CoA reductase

Probab=99.82  E-value=1.1e-18  Score=147.27  Aligned_cols=166  Identities=19%  Similarity=0.115  Sum_probs=129.2

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHH-HHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEA-VVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      +++|+++||||+|.||++++++|+++|++|++++|+.+..... ..++.....++.++.+|+++.++++++++       
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   80 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAID-------   80 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHh-------
Confidence            5678999999999999999999999999999999987653321 22232222357788999999998877765       


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCC--------------
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQ--------------  154 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~--------------  154 (226)
                      .+|+|||+|+...          +++.+.+++|+.++.++++++...-  -++||++||..+..+.              
T Consensus        81 ~~d~Vih~A~~~~----------~~~~~~~~~nv~gt~~ll~aa~~~~--v~r~V~~SS~~avyg~~~~~~~~~~~E~~~  148 (342)
T PLN02214         81 GCDGVFHTASPVT----------DDPEQMVEPAVNGAKFVINAAAEAK--VKRVVITSSIGAVYMDPNRDPEAVVDESCW  148 (342)
T ss_pred             cCCEEEEecCCCC----------CCHHHHHHHHHHHHHHHHHHHHhcC--CCEEEEeccceeeeccCCCCCCcccCcccC
Confidence            6899999998642          1356789999999999999987642  2489999996533210              


Q ss_pred             -------CCCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCc
Q 027248          155 -------SSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHF  196 (226)
Q Consensus       155 -------~~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~  196 (226)
                             .....|+.||.+.+.+++.+..++  ++++..+.|+.+--|.
T Consensus       149 ~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~--g~~~v~lRp~~vyGp~  195 (342)
T PLN02214        149 SDLDFCKNTKNWYCYGKMVAEQAAWETAKEK--GVDLVVLNPVLVLGPP  195 (342)
T ss_pred             CChhhccccccHHHHHHHHHHHHHHHHHHHc--CCcEEEEeCCceECCC
Confidence                   023479999999999998887775  7889999999887764

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.82  E-value=1e-18  Score=148.06  Aligned_cols=170  Identities=14%  Similarity=0.080  Sum_probs=123.5

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEE-EEecCcchHH-HHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVV-VSSRKQKNVD-EAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~-~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      |+++||||+|+||.+++++|.++|++++ +++|...... ...... ..+.++.++.+|+++.+++++++++     .++
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~   75 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPV-AQSERFAFEKVDICDRAELARVFTE-----HQP   75 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhc-ccCCceEEEECCCcChHHHHHHHhh-----cCC
Confidence            5799999999999999999999998754 5555432111 001111 1233577889999999998888774     269


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhh------c-CCEEEEEeccCCcC-----------
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ------K-GSSVVLISSIAGYQ-----------  152 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~------~-~~~iv~~sS~~~~~-----------  152 (226)
                      |+|||+||....     ..+.+++++.+++|+.+++++++++.+.+.      + ..++|++||.+.+.           
T Consensus        76 D~Vih~A~~~~~-----~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E  150 (355)
T PRK10217         76 DCVMHLAAESHV-----DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTE  150 (355)
T ss_pred             CEEEECCcccCc-----chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCC
Confidence            999999997531     233456789999999999999999987531      1 24899999964321           


Q ss_pred             --CCCCCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCC
Q 027248          153 --PQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTH  195 (226)
Q Consensus       153 --~~~~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~  195 (226)
                        +..+.+.|+.||.+.+.+++.++.++  ++++..+.|+.+--|
T Consensus       151 ~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~i~r~~~v~Gp  193 (355)
T PRK10217        151 TTPYAPSSPYSASKASSDHLVRAWLRTY--GLPTLITNCSNNYGP  193 (355)
T ss_pred             CCCCCCCChhHHHHHHHHHHHHHHHHHh--CCCeEEEeeeeeeCC
Confidence              22356789999999999999998876  455666667665544

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.81  E-value=1.3e-18  Score=146.96  Aligned_cols=168  Identities=17%  Similarity=0.121  Sum_probs=122.2

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHH-HHHHHHHh-----cCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVD-EAVVKLKA-----RGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~-~~~~~~~~-----~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      |+++||||+|+||.+++++|+++|++|++++|+.+... .....+.+     .+..+.++.+|++|.+++.++++..   
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~---   77 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI---   77 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC---
Confidence            68999999999999999999999999999999864311 11111111     1235788999999999988888753   


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhh-hhcCCEEEEEeccCCcC-----------CC
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPH-LQKGSSVVLISSIAGYQ-----------PQ  154 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~-l~~~~~iv~~sS~~~~~-----------~~  154 (226)
                        ++|+|||+|+.... .    .+.+.-...+++|+.|+.++++++.+. +++..++|++||...+.           +.
T Consensus        78 --~~d~ViH~Aa~~~~-~----~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~  150 (343)
T TIGR01472        78 --KPTEIYNLAAQSHV-K----VSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNETTPF  150 (343)
T ss_pred             --CCCEEEECCccccc-c----hhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCCCCC
Confidence              68999999997542 1    112223567789999999999999874 33334899999975432           12


Q ss_pred             CCCchhhHhHHHHHHHHHHHHHHhCC----CeEEEEEecC
Q 027248          155 SSMAMYGVTKTALLGLTKALAAEMAP----DTRVNCVAPG  190 (226)
Q Consensus       155 ~~~~~Y~~sKaa~~~~~~~la~e~~~----~i~v~~v~Pg  190 (226)
                      .+.+.|+.||.+.+.+++.++.++.-    ++.++...|+
T Consensus       151 ~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~  190 (343)
T TIGR01472       151 YPRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPR  190 (343)
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCC
Confidence            35678999999999999999887632    2333455554

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.80  E-value=3.4e-18  Score=142.91  Aligned_cols=171  Identities=19%  Similarity=0.167  Sum_probs=127.9

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHH--hcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLK--ARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      +||+++||||+|.||++++++|+++|++|++++|+.+..........  ....++.++.+|+++++.++.+++       
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVD-------   75 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHc-------
Confidence            57899999999999999999999999999999998765433221111  112467889999999988777665       


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCC--cCCC------------
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG--YQPQ------------  154 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~--~~~~------------  154 (226)
                      .+|+|||+|+....  ..    .+...+.+++|+.++.++++++.... +-.++|++||.++  +.+.            
T Consensus        76 ~~d~Vih~A~~~~~--~~----~~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~  148 (322)
T PLN02662         76 GCEGVFHTASPFYH--DV----TDPQAELIDPAVKGTLNVLRSCAKVP-SVKRVVVTSSMAAVAYNGKPLTPDVVVDETW  148 (322)
T ss_pred             CCCEEEEeCCcccC--CC----CChHHHHHHHHHHHHHHHHHHHHhCC-CCCEEEEccCHHHhcCCCcCCCCCCcCCccc
Confidence            68999999986431  11    11225788999999999999987542 2248999999753  2110            


Q ss_pred             ---C-----CCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCcc
Q 027248          155 ---S-----SMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFA  197 (226)
Q Consensus       155 ---~-----~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~  197 (226)
                         |     ..+.|+.||...+.+++.+..+.  ++++..+.|+.+..|..
T Consensus       149 ~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~lRp~~v~Gp~~  197 (322)
T PLN02662        149 FSDPAFCEESKLWYVLSKTLAEEAAWKFAKEN--GIDMVTINPAMVIGPLL  197 (322)
T ss_pred             CCChhHhhcccchHHHHHHHHHHHHHHHHHHc--CCcEEEEeCCcccCCCC
Confidence               1     02479999999999988877664  78999999999988754

>PLN02240 UDP-glucose 4-epimerase

Probab=99.79  E-value=1.4e-17  Score=140.95  Aligned_cols=169  Identities=22%  Similarity=0.250  Sum_probs=123.4

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHH----hcCCcEEEEEeeCCCHHHHHHHHHHHH
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLK----ARGIEVIGVVCHVSNGQQRKNLINQTI   84 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (226)
                      ++++|+++||||+|+||.+++++|+++|++|++++|...........+.    ..+.++.++.+|++++++++.+++.. 
T Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~-   80 (352)
T PLN02240          2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST-   80 (352)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC-
Confidence            3567999999999999999999999999999999876543322222221    12345778899999999988877642 


Q ss_pred             HHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcC-----------C
Q 027248           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ-----------P  153 (226)
Q Consensus        85 ~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~-----------~  153 (226)
                          .+|+|||+||.... .    .+.+++.+.+++|+.++.++++++...  +.+++|++||...+.           +
T Consensus        81 ----~~d~vih~a~~~~~-~----~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~vyg~~~~~~~~E~~~  149 (352)
T PLN02240         81 ----RFDAVIHFAGLKAV-G----ESVAKPLLYYDNNLVGTINLLEVMAKH--GCKKLVFSSSATVYGQPEEVPCTEEFP  149 (352)
T ss_pred             ----CCCEEEEccccCCc-c----ccccCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEccHHHhCCCCCCCCCCCCC
Confidence                79999999997531 1    133466789999999999999877542  235899999974331           1


Q ss_pred             CCCCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecC
Q 027248          154 QSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPG  190 (226)
Q Consensus       154 ~~~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg  190 (226)
                      ..+...|+.||.+.+.+++.++.+. .++++..+.|+
T Consensus       150 ~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~~~R~~  185 (352)
T PLN02240        150 LSATNPYGRTKLFIEEICRDIHASD-PEWKIILLRYF  185 (352)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHhc-CCCCEEEEeec
Confidence            2246789999999999999887652 24555555543

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.79  E-value=1e-17  Score=144.53  Aligned_cols=171  Identities=20%  Similarity=0.220  Sum_probs=142.5

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCe-EEEEecCcchHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQT   83 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~   83 (226)
                      ...++||+++||||+|.||.++++++++.+.+ +++.+|++.+......++.+.  ..+..++-+|++|.+.++.+++..
T Consensus       245 ~~~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~  324 (588)
T COG1086         245 GAMLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH  324 (588)
T ss_pred             HhHcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC
Confidence            35689999999999999999999999999865 999999999999999998875  356789999999999999988854


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHh
Q 027248           84 IEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVT  163 (226)
Q Consensus        84 ~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~s  163 (226)
                           ++|+++|.|+.=  +-|+-|..   ..+.+.+|++|+.++++++...-.+  ++|.+|+.-+..|   ...||+|
T Consensus       325 -----kvd~VfHAAA~K--HVPl~E~n---P~Eai~tNV~GT~nv~~aa~~~~V~--~~V~iSTDKAV~P---tNvmGaT  389 (588)
T COG1086         325 -----KVDIVFHAAALK--HVPLVEYN---PEEAIKTNVLGTENVAEAAIKNGVK--KFVLISTDKAVNP---TNVMGAT  389 (588)
T ss_pred             -----CCceEEEhhhhc--cCcchhcC---HHHHHHHhhHhHHHHHHHHHHhCCC--EEEEEecCcccCC---chHhhHH
Confidence                 799999999863  33433333   4788999999999999999886433  8999999987654   6789999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCce
Q 027248          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFV  192 (226)
Q Consensus       164 Kaa~~~~~~~la~e~~~-~i~v~~v~Pg~v  192 (226)
                      |...+.++.+++..... +-++.+|.=|-|
T Consensus       390 Kr~aE~~~~a~~~~~~~~~T~f~~VRFGNV  419 (588)
T COG1086         390 KRLAEKLFQAANRNVSGTGTRFCVVRFGNV  419 (588)
T ss_pred             HHHHHHHHHHHhhccCCCCcEEEEEEecce
Confidence            99999999999987765 666766665544

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.78  E-value=1.8e-17  Score=137.69  Aligned_cols=168  Identities=18%  Similarity=0.062  Sum_probs=124.4

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCC--CeEEEEecCcchH-HHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           14 VAIVTASTQGIGFGIAERLGLEG--ASVVVSSRKQKNV-DEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g--~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      +++||||+|+||.+++++|++.|  .+|++++|..... ....+.+. ....+.++.+|++++++++++++..     ++
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~   74 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLE-DNPRYRFVKGDIGDRELVSRLFTEH-----QP   74 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhc-cCCCcEEEEcCCcCHHHHHHHHhhc-----CC
Confidence            48999999999999999999987  6788887643211 11112222 1235778899999999988887743     69


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCC------------CCCCc
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP------------QSSMA  158 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~------------~~~~~  158 (226)
                      |+|||+|+....     ..+.++++..+++|+.++.++++++...+. +.++|++||...+..            ..+..
T Consensus        75 d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~~  148 (317)
T TIGR01181        75 DAVVHFAAESHV-----DRSISGPAAFIETNVVGTYTLLEAVRKYWH-EFRFHHISTDEVYGDLEKGDAFTETTPLAPSS  148 (317)
T ss_pred             CEEEEcccccCc-----hhhhhCHHHHHHHHHHHHHHHHHHHHhcCC-CceEEEeeccceeCCCCCCCCcCCCCCCCCCC
Confidence            999999997531     123345678899999999999998877543 247999999653221            12345


Q ss_pred             hhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCC
Q 027248          159 MYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTH  195 (226)
Q Consensus       159 ~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~  195 (226)
                      .|+.+|.+.+.+++.++.+.  ++++..+.|+.+..+
T Consensus       149 ~Y~~sK~~~e~~~~~~~~~~--~~~~~i~R~~~i~G~  183 (317)
T TIGR01181       149 PYSASKAASDHLVRAYHRTY--GLPALITRCSNNYGP  183 (317)
T ss_pred             chHHHHHHHHHHHHHHHHHh--CCCeEEEEeccccCC
Confidence            79999999999999987765  678888888877655

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.78  E-value=1.9e-17  Score=133.92  Aligned_cols=193  Identities=19%  Similarity=0.174  Sum_probs=124.9

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh-
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF-   87 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   87 (226)
                      +..+++++||||+|+||++++++|+++|++|+++.|+.++......    .+..+.++.+|+++..  +.+.    +.+ 
T Consensus        14 ~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~----~~~~~~~~~~Dl~d~~--~~l~----~~~~   83 (251)
T PLN00141         14 NVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP----QDPSLQIVRADVTEGS--DKLV----EAIG   83 (251)
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc----cCCceEEEEeeCCCCH--HHHH----HHhh
Confidence            3457899999999999999999999999999999998765433221    1335788899999842  1222    223 


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcC---CCCCCchhhHhH
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ---PQSSMAMYGVTK  164 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~---~~~~~~~Y~~sK  164 (226)
                      ..+|+||+++|......+         ...+++|+.++.++++++...  +.++||++||...+.   +.+....|...|
T Consensus        84 ~~~d~vi~~~g~~~~~~~---------~~~~~~n~~~~~~ll~a~~~~--~~~~iV~iSS~~v~g~~~~~~~~~~~~~~~  152 (251)
T PLN00141         84 DDSDAVICATGFRRSFDP---------FAPWKVDNFGTVNLVEACRKA--GVTRFILVSSILVNGAAMGQILNPAYIFLN  152 (251)
T ss_pred             cCCCEEEECCCCCcCCCC---------CCceeeehHHHHHHHHHHHHc--CCCEEEEEccccccCCCcccccCcchhHHH
Confidence            379999999986431111         112468889999999887542  346899999986432   222344577666


Q ss_pred             HHHHHHHHHHHHH--hCC-CeEEEEEecCceeCCcccc-cccCchhhhhhccCCCCCchhhhccc
Q 027248          165 TALLGLTKALAAE--MAP-DTRVNCVAPGFVPTHFAEY-ITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       165 aa~~~~~~~la~e--~~~-~i~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      .....+...+..|  +.. +++++.+.||++.++.... .....   ........+.++++|.++
T Consensus       153 ~~~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~~~~~~~~~---~~~~~~~~i~~~dvA~~~  214 (251)
T PLN00141        153 LFGLTLVAKLQAEKYIRKSGINYTIVRPGGLTNDPPTGNIVMEP---EDTLYEGSISRDQVAEVA  214 (251)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCcEEEEECCCccCCCCCceEEECC---CCccccCcccHHHHHHHH
Confidence            6544433333333  344 8999999999998764321 11000   000112356788887653

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.77  E-value=3.5e-17  Score=138.51  Aligned_cols=176  Identities=15%  Similarity=0.047  Sum_probs=130.2

Q ss_pred             ccccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhc-----CCcEEEEEeeCCCHHHHHHH
Q 027248            5 KMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-----GIEVIGVVCHVSNGQQRKNL   79 (226)
Q Consensus         5 ~~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~   79 (226)
                      +.+..+++|+++||||+|.||..++++|+++|++|++++|...........+...     ..++.++.+|+++.+.++.+
T Consensus         8 ~~~~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~   87 (348)
T PRK15181          8 RTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKA   87 (348)
T ss_pred             hhcccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHH
Confidence            3455677899999999999999999999999999999998765433222222111     13467889999998887666


Q ss_pred             HHHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCC------
Q 027248           80 INQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP------  153 (226)
Q Consensus        80 ~~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~------  153 (226)
                      ++       .+|+|||.|+.....     .+.++....+++|+.|+.++++++...  .-.++|++||...+..      
T Consensus        88 ~~-------~~d~ViHlAa~~~~~-----~~~~~~~~~~~~Nv~gt~nll~~~~~~--~~~~~v~~SS~~vyg~~~~~~~  153 (348)
T PRK15181         88 CK-------NVDYVLHQAALGSVP-----RSLKDPIATNSANIDGFLNMLTAARDA--HVSSFTYAASSSTYGDHPDLPK  153 (348)
T ss_pred             hh-------CCCEEEECccccCch-----hhhhCHHHHHHHHHHHHHHHHHHHHHc--CCCeEEEeechHhhCCCCCCCC
Confidence            64       689999999975311     122333567899999999999988653  2248999998754421      


Q ss_pred             -----CCCCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCc
Q 027248          154 -----QSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHF  196 (226)
Q Consensus       154 -----~~~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~  196 (226)
                           ..+...|+.||.+.+.+++.++.++  ++++..+.|+.+.-|.
T Consensus       154 ~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~lR~~~vyGp~  199 (348)
T PRK15181        154 IEERIGRPLSPYAVTKYVNELYADVFARSY--EFNAIGLRYFNVFGRR  199 (348)
T ss_pred             CCCCCCCCCChhhHHHHHHHHHHHHHHHHh--CCCEEEEEecceeCcC
Confidence                 1235689999999999998877664  7888888888876653

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.76  E-value=4.2e-17  Score=133.64  Aligned_cols=173  Identities=21%  Similarity=0.133  Sum_probs=133.7

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHH--HHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDE--AVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      .+++|+||||+|.||..++++|+++|++|..+.|++++.+.  ...++.....+...+..|++++++++++++       
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~-------   77 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAID-------   77 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHh-------
Confidence            67999999999999999999999999999999999988544  355555555568899999999999998888       


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCC-CC-----------
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQ-SS-----------  156 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~-~~-----------  156 (226)
                      ..|+|+|.|..... ..   .+  .-.+.++..+.|+.++.+++...= .=.|||++||.++.... +.           
T Consensus        78 gcdgVfH~Asp~~~-~~---~~--~e~~li~pav~Gt~nVL~ac~~~~-sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~  150 (327)
T KOG1502|consen   78 GCDGVFHTASPVDF-DL---ED--PEKELIDPAVKGTKNVLEACKKTK-SVKRVVYTSSTAAVRYNGPNIGENSVVDEES  150 (327)
T ss_pred             CCCEEEEeCccCCC-CC---CC--cHHhhhhHHHHHHHHHHHHHhccC-CcceEEEeccHHHhccCCcCCCCCccccccc
Confidence            89999999986541 11   11  124788999999999999997752 11489999999886432 10           


Q ss_pred             C----------chhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCcccc
Q 027248          157 M----------AMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEY  199 (226)
Q Consensus       157 ~----------~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~~~  199 (226)
                      +          ..|+.||.-.+--+..++.|.  ++....++|+.|--|....
T Consensus       151 wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e~--~~~lv~inP~lV~GP~l~~  201 (327)
T KOG1502|consen  151 WSDLDFCRCKKLWYALSKTLAEKAAWEFAKEN--GLDLVTINPGLVFGPGLQP  201 (327)
T ss_pred             CCcHHHHHhhHHHHHHHHHHHHHHHHHHHHhC--CccEEEecCCceECCCccc
Confidence            1          248888875555444444443  7899999999998886655

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.76  E-value=7.9e-17  Score=136.37  Aligned_cols=168  Identities=14%  Similarity=0.080  Sum_probs=119.9

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCCCe-EEEEecCcc--hHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           14 VAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQK--NVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g~~-v~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      +++||||+|+||.+++++|+++|++ |+.+++...  ..+... .+. .+.++.++.+|+++.+++++++++     ..+
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~   74 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLA-DVS-DSERYVFEHADICDRAELDRIFAQ-----HQP   74 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHH-hcc-cCCceEEEEecCCCHHHHHHHHHh-----cCC
Confidence            4899999999999999999999976 555555331  222111 111 123567789999999998888875     279


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc-------CCEEEEEeccCCcCC----------
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-------GSSVVLISSIAGYQP----------  153 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~-------~~~iv~~sS~~~~~~----------  153 (226)
                      |+|||+||.... .    .+.++.++.+++|+.|+.++++++.+.+++       ..++|++||...+..          
T Consensus        75 d~vih~A~~~~~-~----~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~  149 (352)
T PRK10084         75 DAVMHLAAESHV-D----RSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENS  149 (352)
T ss_pred             CEEEECCcccCC-c----chhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCcccccccc
Confidence            999999997531 1    112334778999999999999999886521       248999999743321          


Q ss_pred             -----------CCCCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCC
Q 027248          154 -----------QSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTH  195 (226)
Q Consensus       154 -----------~~~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~  195 (226)
                                 ..+...|+.||.+.+.+++.++.++  ++.+..+.|+.+.-|
T Consensus       150 ~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--g~~~vilr~~~v~Gp  200 (352)
T PRK10084        150 EELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTY--GLPTIVTNCSNNYGP  200 (352)
T ss_pred             ccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHh--CCCEEEEeccceeCC
Confidence                       1235689999999999999998876  444555566555443

>PLN02686 cinnamoyl-CoA reductase

Probab=99.75  E-value=7.1e-17  Score=137.54  Aligned_cols=174  Identities=14%  Similarity=0.172  Sum_probs=127.6

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhc------CCcEEEEEeeCCCHHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR------GIEVIGVVCHVSNGQQRKNLI   80 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~v~~~~   80 (226)
                      ..+.++|+++||||+|+||.+++++|+++|++|+++.|+.+..+.+ .++...      ...+.++.+|+++.+++.+++
T Consensus        48 ~~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i  126 (367)
T PLN02686         48 GADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPESLHEAF  126 (367)
T ss_pred             ccCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhhhccccccCCceEEEEcCCCCHHHHHHHH
Confidence            3467899999999999999999999999999999988887654443 222211      124778899999999888777


Q ss_pred             HHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCC--c-----C-
Q 027248           81 NQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG--Y-----Q-  152 (226)
Q Consensus        81 ~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~--~-----~-  152 (226)
                      +       .+|.++|.|+...... ..    .......++|+.++.++++++...- .-.++|++||..+  +     . 
T Consensus       127 ~-------~~d~V~hlA~~~~~~~-~~----~~~~~~~~~nv~gt~~llea~~~~~-~v~r~V~~SS~~~~vyg~~~~~~  193 (367)
T PLN02686        127 D-------GCAGVFHTSAFVDPAG-LS----GYTKSMAELEAKASENVIEACVRTE-SVRKCVFTSSLLACVWRQNYPHD  193 (367)
T ss_pred             H-------hccEEEecCeeecccc-cc----cccchhhhhhHHHHHHHHHHHHhcC-CccEEEEeccHHHhcccccCCCC
Confidence            6       5789999988753211 10    0113455789999999999876431 1238999999631  1     0 


Q ss_pred             -C--------------CCCCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCc
Q 027248          153 -P--------------QSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHF  196 (226)
Q Consensus       153 -~--------------~~~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~  196 (226)
                       +              ..+...|+.||.+.+.+++.++.+.  +++++.+.|+.+..|.
T Consensus       194 ~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--gl~~v~lRp~~vyGp~  250 (367)
T PLN02686        194 LPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARGK--GLKLATICPALVTGPG  250 (367)
T ss_pred             CCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHhc--CceEEEEcCCceECCC
Confidence             0              0123469999999999999887764  8999999999999885

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.75  E-value=1.7e-17  Score=134.70  Aligned_cols=163  Identities=22%  Similarity=0.244  Sum_probs=120.4

Q ss_pred             EEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhcC--CcE----EEEEeeCCCHHHHHHHHHHHHHHh
Q 027248           15 AIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARG--IEV----IGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~--~~~----~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      |+||||+|.||.+++++|++.+. ++++++|++.++-....++.+..  .++    ..+.+|++|.+.+..++++.    
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~----   76 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY----   76 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT------
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc----
Confidence            69999999999999999999985 69999999999999988885432  223    34578999999988887754    


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHhHHHH
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~  167 (226)
                       ++|+++|.|+.=  +-++.+..   ..+.+++|+.|+.++++++..+-.+  ++|++|+.-+..|   .+.||+||...
T Consensus        77 -~pdiVfHaAA~K--hVpl~E~~---p~eav~tNv~GT~nv~~aa~~~~v~--~~v~ISTDKAv~P---tnvmGatKrla  145 (293)
T PF02719_consen   77 -KPDIVFHAAALK--HVPLMEDN---PFEAVKTNVLGTQNVAEAAIEHGVE--RFVFISTDKAVNP---TNVMGATKRLA  145 (293)
T ss_dssp             -T-SEEEE--------HHHHCCC---HHHHHHHHCHHHHHHHHHHHHTT-S--EEEEEEECGCSS-----SHHHHHHHHH
T ss_pred             -CCCEEEEChhcC--CCChHHhC---HHHHHHHHHHHHHHHHHHHHHcCCC--EEEEccccccCCC---CcHHHHHHHHH
Confidence             999999999863  33444443   3788999999999999999986433  9999999987654   67899999999


Q ss_pred             HHHHHHHHHHhCC-CeEEEEEecCce
Q 027248          168 LGLTKALAAEMAP-DTRVNCVAPGFV  192 (226)
Q Consensus       168 ~~~~~~la~e~~~-~i~v~~v~Pg~v  192 (226)
                      +.++.+++..... +.++.+|.=|-|
T Consensus       146 E~l~~~~~~~~~~~~t~f~~VRFGNV  171 (293)
T PF02719_consen  146 EKLVQAANQYSGNSDTKFSSVRFGNV  171 (293)
T ss_dssp             HHHHHHHCCTSSSS--EEEEEEE-EE
T ss_pred             HHHHHHHhhhCCCCCcEEEEEEecce
Confidence            9999999988755 667777765544

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.75  E-value=8.9e-17  Score=134.36  Aligned_cols=158  Identities=20%  Similarity=0.143  Sum_probs=122.8

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCEE
Q 027248           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVV   93 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~l   93 (226)
                      +++||||+|+||+.+++.|+++|++|++++|+++.....    .  ...+..+.+|+++.++++++++       .+|++
T Consensus         2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~--~~~~~~~~~D~~~~~~l~~~~~-------~~d~v   68 (328)
T TIGR03466         2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNL----E--GLDVEIVEGDLRDPASLRKAVA-------GCRAL   68 (328)
T ss_pred             eEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccccc----c--cCCceEEEeeCCCHHHHHHHHh-------CCCEE
Confidence            689999999999999999999999999999987653221    1  1247788999999998877665       78999


Q ss_pred             EEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCC---------------CCc
Q 027248           94 VSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQS---------------SMA  158 (226)
Q Consensus        94 i~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~---------------~~~  158 (226)
                      ||+|+....       ..+++++.+++|+.++.++.+++...-  .+++|++||...+...+               ...
T Consensus        69 i~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~  139 (328)
T TIGR03466        69 FHVAADYRL-------WAPDPEEMYAANVEGTRNLLRAALEAG--VERVVYTSSVATLGVRGDGTPADETTPSSLDDMIG  139 (328)
T ss_pred             EEeceeccc-------CCCCHHHHHHHHHHHHHHHHHHHHHhC--CCeEEEEechhhcCcCCCCCCcCccCCCCcccccC
Confidence            999985321       122357788999999999999887542  35899999976543211               135


Q ss_pred             hhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCC
Q 027248          159 MYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTH  195 (226)
Q Consensus       159 ~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~  195 (226)
                      .|+.+|.+.+.+++.+..+.  ++++..+.|+.+..+
T Consensus       140 ~Y~~sK~~~e~~~~~~~~~~--~~~~~ilR~~~~~G~  174 (328)
T TIGR03466       140 HYKRSKFLAEQAALEMAAEK--GLPVVIVNPSTPIGP  174 (328)
T ss_pred             hHHHHHHHHHHHHHHHHHhc--CCCEEEEeCCccCCC
Confidence            79999999999999887664  788889999877654

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.74  E-value=2.7e-16  Score=132.36  Aligned_cols=166  Identities=16%  Similarity=0.142  Sum_probs=119.3

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhc-CCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCE
Q 027248           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~   92 (226)
                      +++||||+|+||++++++|+++|++|++++|...........+... +.++.++.+|+++++.++++++.     .++|+
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~d~   76 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHD-----HAIDT   76 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhc-----CCCCE
Confidence            4899999999999999999999999999887644333322222221 33466788999999988887663     37999


Q ss_pred             EEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCC-----------C-CCCchh
Q 027248           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP-----------Q-SSMAMY  160 (226)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~-----------~-~~~~~Y  160 (226)
                      +||+||.... ..    ..+...+.+++|+.++.++++++...  ..+++|++||...+..           . .+...|
T Consensus        77 vvh~a~~~~~-~~----~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~Y  149 (338)
T PRK10675         77 VIHFAGLKAV-GE----SVQKPLEYYDNNVNGTLRLISAMRAA--NVKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPY  149 (338)
T ss_pred             EEECCccccc-cc----hhhCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEeccHHhhCCCCCCccccccCCCCCCChh
Confidence            9999987531 11    12334568899999999999877653  2358999999754321           1 236789


Q ss_pred             hHhHHHHHHHHHHHHHHhCCCeEEEEEecCce
Q 027248          161 GVTKTALLGLTKALAAEMAPDTRVNCVAPGFV  192 (226)
Q Consensus       161 ~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v  192 (226)
                      +.+|.+.+.+++.++.+.. ++++..+.|+.+
T Consensus       150 ~~sK~~~E~~~~~~~~~~~-~~~~~ilR~~~v  180 (338)
T PRK10675        150 GKSKLMVEQILTDLQKAQP-DWSIALLRYFNP  180 (338)
T ss_pred             HHHHHHHHHHHHHHHHhcC-CCcEEEEEeeee
Confidence            9999999999999876642 455555554433

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.72  E-value=4.9e-16  Score=129.63  Aligned_cols=168  Identities=20%  Similarity=0.132  Sum_probs=123.8

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCEE
Q 027248           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVV   93 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~l   93 (226)
                      +++||||+|+||.+++++|+++|++|++++|............... ..+..+.+|++++++++++++.     +++|++
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~-----~~~d~v   74 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERI-TRVTFVEGDLRDRELLDRLFEE-----HKIDAV   74 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccc-cceEEEECCCCCHHHHHHHHHh-----CCCcEE
Confidence            3789999999999999999999999988876543322222222221 2566788999999998887763     489999


Q ss_pred             EEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCC-----------CCCCchhhH
Q 027248           94 VSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP-----------QSSMAMYGV  162 (226)
Q Consensus        94 i~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~-----------~~~~~~Y~~  162 (226)
                      ||+||.... .    .+.++..+.+..|+.++..+++++...  +.+++|++||...+..           ..+...|+.
T Consensus        75 v~~ag~~~~-~----~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y~~  147 (328)
T TIGR01179        75 IHFAGLIAV-G----ESVQDPLKYYRNNVVNTLNLLEAMQQT--GVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPYGR  147 (328)
T ss_pred             EECccccCc-c----hhhcCchhhhhhhHHHHHHHHHHHHhc--CCCEEEEecchhhcCCCCCCCccccCCCCCCCchHH
Confidence            999997531 1    122344677899999999999887543  2358999998754321           123467999


Q ss_pred             hHHHHHHHHHHHHHHhCCCeEEEEEecCceeCC
Q 027248          163 TKTALLGLTKALAAEMAPDTRVNCVAPGFVPTH  195 (226)
Q Consensus       163 sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~  195 (226)
                      +|++++.+++.++.+. .++++..+.|+.+..+
T Consensus       148 sK~~~e~~~~~~~~~~-~~~~~~ilR~~~v~g~  179 (328)
T TIGR01179       148 SKLMSERILRDLSKAD-PGLSYVILRYFNVAGA  179 (328)
T ss_pred             HHHHHHHHHHHHHHhc-cCCCEEEEecCcccCC
Confidence            9999999999987762 3788888998777665

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.71  E-value=8.3e-16  Score=123.02  Aligned_cols=164  Identities=18%  Similarity=0.098  Sum_probs=124.0

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCC--eEEEEecCc--chHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQ--KNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~--~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      +++|||||+|.||..+++++.++..  +|+.++.-.  .+.+.+ ..+ ...++..++++|++|.+.+.+++++-     
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l-~~~-~~~~~~~fv~~DI~D~~~v~~~~~~~-----   73 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENL-ADV-EDSPRYRFVQGDICDRELVDRLFKEY-----   73 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHH-Hhh-hcCCCceEEeccccCHHHHHHHHHhc-----
Confidence            4689999999999999999999864  366666532  223232 222 22457899999999999988887754     


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCc-------------CCCC
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY-------------QPQS  155 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~-------------~~~~  155 (226)
                      ++|+++|-|+=..     -+.|.++-+..+++|+.|++.+++++..+..+ -|++.+|+-..+             .+..
T Consensus        74 ~~D~VvhfAAESH-----VDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~-frf~HISTDEVYG~l~~~~~~FtE~tp~~  147 (340)
T COG1088          74 QPDAVVHFAAESH-----VDRSIDGPAPFIQTNVVGTYTLLEAARKYWGK-FRFHHISTDEVYGDLGLDDDAFTETTPYN  147 (340)
T ss_pred             CCCeEEEechhcc-----ccccccChhhhhhcchHHHHHHHHHHHHhccc-ceEEEeccccccccccCCCCCcccCCCCC
Confidence            8999999998543     23445555788999999999999999887632 378999987643             3456


Q ss_pred             CCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCc
Q 027248          156 SMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGF  191 (226)
Q Consensus       156 ~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~  191 (226)
                      +.++|++|||+.+++++++.+.+  |+.+....+.-
T Consensus       148 PsSPYSASKAasD~lVray~~TY--glp~~ItrcSN  181 (340)
T COG1088         148 PSSPYSASKAASDLLVRAYVRTY--GLPATITRCSN  181 (340)
T ss_pred             CCCCcchhhhhHHHHHHHHHHHc--CCceEEecCCC
Confidence            78899999999999999999998  55555555443

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.71  E-value=1.1e-15  Score=129.31  Aligned_cols=166  Identities=19%  Similarity=0.127  Sum_probs=118.3

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCC--CeEEEEecCcchHH---HHHHHHHhcC--------CcEEEEEeeCCCHHH--HHH
Q 027248           14 VAIVTASTQGIGFGIAERLGLEG--ASVVVSSRKQKNVD---EAVVKLKARG--------IEVIGVVCHVSNGQQ--RKN   78 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g--~~v~~~~r~~~~~~---~~~~~~~~~~--------~~~~~~~~Dv~~~~~--v~~   78 (226)
                      +++||||+|+||++++++|+++|  ++|+++.|+.+..+   ...+.+....        .++.++.+|++++..  .+.
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            48999999999999999999999  67999999876321   2222222111        468889999987531  001


Q ss_pred             HHHHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCC----
Q 027248           79 LINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQ----  154 (226)
Q Consensus        79 ~~~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~----  154 (226)
                      ....+   ...+|++||||+.....        ..++..+++|+.++..+++.+...-  ..+++++||.......    
T Consensus        81 ~~~~~---~~~~d~vih~a~~~~~~--------~~~~~~~~~nv~g~~~ll~~a~~~~--~~~~v~iSS~~v~~~~~~~~  147 (367)
T TIGR01746        81 EWERL---AENVDTIVHNGALVNWV--------YPYSELRAANVLGTREVLRLAASGR--AKPLHYVSTISVLAAIDLST  147 (367)
T ss_pred             HHHHH---HhhCCEEEeCCcEeccC--------CcHHHHhhhhhHHHHHHHHHHhhCC--CceEEEEccccccCCcCCCC
Confidence            11222   24799999999975411        1246677899999999998887642  2369999998765321    


Q ss_pred             ------------CCCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCC
Q 027248          155 ------------SSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTH  195 (226)
Q Consensus       155 ------------~~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~  195 (226)
                                  .....|+.||.+.+.+.+.+...   |++++.+.||.+..+
T Consensus       148 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---g~~~~i~Rpg~v~G~  197 (367)
T TIGR01746       148 VTEDDAIVTPPPGLAGGYAQSKWVAELLVREASDR---GLPVTIVRPGRILGN  197 (367)
T ss_pred             ccccccccccccccCCChHHHHHHHHHHHHHHHhc---CCCEEEECCCceeec
Confidence                        12347999999999988765543   899999999999875

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.70  E-value=7.9e-16  Score=126.33  Aligned_cols=164  Identities=18%  Similarity=0.138  Sum_probs=124.4

Q ss_pred             EEEcCCCchhHHHHHHHHhCC--CeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCEE
Q 027248           16 IVTASTQGIGFGIAERLGLEG--ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVV   93 (226)
Q Consensus        16 lItGa~~giG~a~~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~l   93 (226)
                      |||||+|.||.+++++|+++|  .+|.++++.+....  ...+.. .....++++|++++++++++++       ..|++
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~--~~~~~~-~~~~~~~~~Di~d~~~l~~a~~-------g~d~V   70 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKF--LKDLQK-SGVKEYIQGDITDPESLEEALE-------GVDVV   70 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEccccccccc--chhhhc-ccceeEEEeccccHHHHHHHhc-------CCceE
Confidence            699999999999999999999  78999888775422  111211 1123388999999999988877       78999


Q ss_pred             EEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCC-----------------CCC
Q 027248           94 VSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP-----------------QSS  156 (226)
Q Consensus        94 i~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~-----------------~~~  156 (226)
                      ||.|+......      ....++++++|+.|+-++++++...-  -.++|++||.++..+                 ...
T Consensus        71 ~H~Aa~~~~~~------~~~~~~~~~vNV~GT~nvl~aa~~~~--VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~  142 (280)
T PF01073_consen   71 FHTAAPVPPWG------DYPPEEYYKVNVDGTRNVLEAARKAG--VKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSP  142 (280)
T ss_pred             EEeCccccccC------cccHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEEcCcceeEeccCCCCcccCCcCCcccccc
Confidence            99999754211      33458899999999999999998642  248999999987543                 013


Q ss_pred             CchhhHhHHHHHHHHHHHHH-HhCC--CeEEEEEecCceeCCcc
Q 027248          157 MAMYGVTKTALLGLTKALAA-EMAP--DTRVNCVAPGFVPTHFA  197 (226)
Q Consensus       157 ~~~Y~~sKaa~~~~~~~la~-e~~~--~i~v~~v~Pg~v~t~~~  197 (226)
                      ...|+.||+..+.++..... ++..  .++..+|.|..|.-|.-
T Consensus       143 ~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d  186 (280)
T PF01073_consen  143 LDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGD  186 (280)
T ss_pred             cCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCccc
Confidence            45899999999998877654 2222  58899999998887643

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PLN02427 UDP-apiose/xylose synthase

Probab=99.70  E-value=1.3e-15  Score=130.60  Aligned_cols=170  Identities=13%  Similarity=0.038  Sum_probs=121.6

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhC-CCeEEEEecCcchHHHHHHHHH-hcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLE-GASVVVSSRKQKNVDEAVVKLK-ARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~-g~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      .+.++|+||||+|.||+.++++|+++ |++|++++|+.++......... ....++.++.+|+++.+.++++++      
T Consensus        12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~------   85 (386)
T PLN02427         12 IKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIK------   85 (386)
T ss_pred             ccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhh------
Confidence            45668999999999999999999998 5899999987655433221100 012357889999999988777665      


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCC---------C---
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQ---------S---  155 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~---------~---  155 (226)
                       .+|+|||.|+.... ....    .+-.+.+..|+.++.++++++...   +.++|++||...+...         |   
T Consensus        86 -~~d~ViHlAa~~~~-~~~~----~~~~~~~~~n~~gt~~ll~aa~~~---~~r~v~~SS~~vYg~~~~~~~~e~~p~~~  156 (386)
T PLN02427         86 -MADLTINLAAICTP-ADYN----TRPLDTIYSNFIDALPVVKYCSEN---NKRLIHFSTCEVYGKTIGSFLPKDHPLRQ  156 (386)
T ss_pred             -cCCEEEEcccccCh-hhhh----hChHHHHHHHHHHHHHHHHHHHhc---CCEEEEEeeeeeeCCCcCCCCCccccccc
Confidence             58999999997531 1111    111344567999999999887543   2589999997533110         0   


Q ss_pred             ---------------------CCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCc
Q 027248          156 ---------------------SMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHF  196 (226)
Q Consensus       156 ---------------------~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~  196 (226)
                                           ....|+.||.+.+.+++.++...  ++.+..+.|+.+.-|.
T Consensus       157 ~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--g~~~~ilR~~~vyGp~  216 (386)
T PLN02427        157 DPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN--GLEFTIVRPFNWIGPR  216 (386)
T ss_pred             ccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhhc--CCceEEecccceeCCC
Confidence                                 12369999999999998766543  7888999998887764

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.68  E-value=3.3e-15  Score=120.05  Aligned_cols=149  Identities=22%  Similarity=0.184  Sum_probs=120.1

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCEE
Q 027248           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVV   93 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~l   93 (226)
                      +||||||+|-||.+++.+|++.|++|++++.-............     ..+++.|+.|.+.+++++++-     ++|.+
T Consensus         2 ~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~-----~~f~~gDi~D~~~L~~vf~~~-----~idaV   71 (329)
T COG1087           2 KVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQ-----FKFYEGDLLDRALLTAVFEEN-----KIDAV   71 (329)
T ss_pred             eEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhcc-----CceEEeccccHHHHHHHHHhc-----CCCEE
Confidence            59999999999999999999999999999998766555544332     568899999999988888764     99999


Q ss_pred             EEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCc-----------CCCCCCchhhH
Q 027248           94 VSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY-----------QPQSSMAMYGV  162 (226)
Q Consensus        94 i~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~-----------~~~~~~~~Y~~  162 (226)
                      ||-||.....     .|.+.-.+.++.|+.|++.+++++...-.+  ++||-||.+.+           .+..+..+|+.
T Consensus        72 iHFAa~~~Vg-----ESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~--~~vFSStAavYG~p~~~PI~E~~~~~p~NPYG~  144 (329)
T COG1087          72 VHFAASISVG-----ESVQNPLKYYDNNVVGTLNLIEAMLQTGVK--KFIFSSTAAVYGEPTTSPISETSPLAPINPYGR  144 (329)
T ss_pred             EECccccccc-----hhhhCHHHHHhhchHhHHHHHHHHHHhCCC--EEEEecchhhcCCCCCcccCCCCCCCCCCcchh
Confidence            9999975422     344555788999999999999999876433  78888877654           22335678999


Q ss_pred             hHHHHHHHHHHHHHHhC
Q 027248          163 TKTALLGLTKALAAEMA  179 (226)
Q Consensus       163 sKaa~~~~~~~la~e~~  179 (226)
                      ||...+.+.+.+++...
T Consensus       145 sKlm~E~iL~d~~~a~~  161 (329)
T COG1087         145 SKLMSEEILRDAAKANP  161 (329)
T ss_pred             HHHHHHHHHHHHHHhCC
Confidence            99999999999888763

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.68  E-value=9.7e-15  Score=116.42  Aligned_cols=163  Identities=25%  Similarity=0.260  Sum_probs=131.5

Q ss_pred             EEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCEEE
Q 027248           15 AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVV   94 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~li   94 (226)
                      |+||||+|.||.+++++|.++|+.|+.+.|+.........+.     ++.++.+|+.+.+.++++++..     .+|.+|
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~dl~~~~~~~~~~~~~-----~~d~vi   70 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKL-----NVEFVIGDLTDKEQLEKLLEKA-----NIDVVI   70 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHT-----TEEEEESETTSHHHHHHHHHHH-----TESEEE
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccc-----eEEEEEeecccccccccccccc-----CceEEE
Confidence            799999999999999999999999888888776644333322     6888999999999999988865     899999


Q ss_pred             EcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCC-----------CCCchhhHh
Q 027248           95 SNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQ-----------SSMAMYGVT  163 (226)
Q Consensus        95 ~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~-----------~~~~~Y~~s  163 (226)
                      |.|+...     ...+.++....++.|+.++.++++++...-  ..++|++||...+...           .+...|+.+
T Consensus        71 ~~a~~~~-----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~~~  143 (236)
T PF01370_consen   71 HLAAFSS-----NPESFEDPEEIIEANVQGTRNLLEAAREAG--VKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYGAS  143 (236)
T ss_dssp             EEBSSSS-----HHHHHHSHHHHHHHHHHHHHHHHHHHHHHT--TSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHHHH
T ss_pred             Eeecccc-----cccccccccccccccccccccccccccccc--cccccccccccccccccccccccccccccccccccc
Confidence            9998742     112335668888999999999999988652  2599999997554222           245679999


Q ss_pred             HHHHHHHHHHHHHHhCCCeEEEEEecCceeCCc
Q 027248          164 KTALLGLTKALAAEMAPDTRVNCVAPGFVPTHF  196 (226)
Q Consensus       164 Kaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~  196 (226)
                      |...+.+.+.+..+.  ++++..+.|+.+--|.
T Consensus       144 K~~~e~~~~~~~~~~--~~~~~~~R~~~vyG~~  174 (236)
T PF01370_consen  144 KRAAEELLRDYAKKY--GLRVTILRPPNVYGPG  174 (236)
T ss_dssp             HHHHHHHHHHHHHHH--TSEEEEEEESEEESTT
T ss_pred             ccccccccccccccc--cccccccccccccccc
Confidence            999999999988876  7899999999888776

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=99.65  E-value=3.2e-14  Score=104.46  Aligned_cols=186  Identities=20%  Similarity=0.192  Sum_probs=140.8

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh--CC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF--GK   89 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--~~   89 (226)
                      .++++|-||-|.+|.++++.|.++++.|.-++-++..-          ...-.++..|-+--++-+.+++++-+.+  .+
T Consensus         3 agrVivYGGkGALGSacv~~FkannywV~siDl~eNe~----------Ad~sI~V~~~~swtEQe~~v~~~vg~sL~gek   72 (236)
T KOG4022|consen    3 AGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQ----------ADSSILVDGNKSWTEQEQSVLEQVGSSLQGEK   72 (236)
T ss_pred             CceEEEEcCcchHhHHHHHHHHhcCeEEEEEeeccccc----------ccceEEecCCcchhHHHHHHHHHHHHhhcccc
Confidence            36788999999999999999999999998888776431          0112234445555577777888887765  48


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHhHHHHHH
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLG  169 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~  169 (226)
                      +|.++|.||..........--....+-+|.-.+...-...+.+..+++.+|-+-....-.+..+.|++-.|+++|+|++.
T Consensus        73 vDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAkaAl~gTPgMIGYGMAKaAVHq  152 (236)
T KOG4022|consen   73 VDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAKAALGGTPGMIGYGMAKAAVHQ  152 (236)
T ss_pred             cceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeecccccccCCCCcccchhHHHHHHHH
Confidence            99999999987533322122223345566666666666667777788877777777777788899999999999999999


Q ss_pred             HHHHHHHHhC--C-CeEEEEEecCceeCCcccccccCchhh
Q 027248          170 LTKALAAEMA--P-DTRVNCVAPGFVPTHFAEYITSNDGVV  207 (226)
Q Consensus       170 ~~~~la~e~~--~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~  207 (226)
                      ++++|+.+-.  | |--+.+|.|-..||||.+.+.++.++.
T Consensus       153 Lt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwMP~ADfs  193 (236)
T KOG4022|consen  153 LTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKWMPNADFS  193 (236)
T ss_pred             HHHHhcccccCCCCCceeEEEeeeeccCccccccCCCCccc
Confidence            9999999853  3 778889999999999999999887653

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.64  E-value=1.2e-14  Score=124.78  Aligned_cols=164  Identities=18%  Similarity=0.173  Sum_probs=119.8

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHH--HHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDE--AVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      .++++++||||+|+||++++++|+++|++|++++|+..+...  ...+.......+.++.+|++|+++++++++..   .
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~---~  134 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSE---G  134 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHh---C
Confidence            457899999999999999999999999999999998765421  11222222346788999999999988887643   1


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHhHHHH
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~  167 (226)
                      +.+|+||||+|... ..         ..+.+++|+.++.++++++...  +-+++|++||.....   +...|..+|...
T Consensus       135 ~~~D~Vi~~aa~~~-~~---------~~~~~~vn~~~~~~ll~aa~~~--gv~r~V~iSS~~v~~---p~~~~~~sK~~~  199 (390)
T PLN02657        135 DPVDVVVSCLASRT-GG---------VKDSWKIDYQATKNSLDAGREV--GAKHFVLLSAICVQK---PLLEFQRAKLKF  199 (390)
T ss_pred             CCCcEEEECCccCC-CC---------CccchhhHHHHHHHHHHHHHHc--CCCEEEEEeeccccC---cchHHHHHHHHH
Confidence            27999999998532 11         1234567888888888887543  235899999987543   345688899988


Q ss_pred             HHHHHHHHHHhCCCeEEEEEecCceeCC
Q 027248          168 LGLTKALAAEMAPDTRVNCVAPGFVPTH  195 (226)
Q Consensus       168 ~~~~~~la~e~~~~i~v~~v~Pg~v~t~  195 (226)
                      +...+.    ...++++..+.|+.+..+
T Consensus       200 E~~l~~----~~~gl~~tIlRp~~~~~~  223 (390)
T PLN02657        200 EAELQA----LDSDFTYSIVRPTAFFKS  223 (390)
T ss_pred             HHHHHh----ccCCCCEEEEccHHHhcc
Confidence            877654    223889999999776533

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.64  E-value=1.1e-14  Score=124.33  Aligned_cols=165  Identities=19%  Similarity=0.102  Sum_probs=119.8

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      ++++|+||||+|.||++++++|.++|++|+.++|......      ........++.+|+++.+.+..+++       .+
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~------~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   86 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHM------SEDMFCHEFHLVDLRVMENCLKVTK-------GV   86 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccc------ccccccceEEECCCCCHHHHHHHHh-------CC
Confidence            5789999999999999999999999999999998653210      0011123567789999887665543       68


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcC-----------------C
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ-----------------P  153 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~-----------------~  153 (226)
                      |+|||.|+...... ...   .+....+..|+.++.++++++...  .-.++|++||...+.                 +
T Consensus        87 D~Vih~Aa~~~~~~-~~~---~~~~~~~~~N~~~t~nll~aa~~~--~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p  160 (370)
T PLN02695         87 DHVFNLAADMGGMG-FIQ---SNHSVIMYNNTMISFNMLEAARIN--GVKRFFYASSACIYPEFKQLETNVSLKESDAWP  160 (370)
T ss_pred             CEEEEcccccCCcc-ccc---cCchhhHHHHHHHHHHHHHHHHHh--CCCEEEEeCchhhcCCccccCcCCCcCcccCCC
Confidence            99999998643111 111   112345678999999999988643  224899999974321                 2


Q ss_pred             CCCCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCc
Q 027248          154 QSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHF  196 (226)
Q Consensus       154 ~~~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~  196 (226)
                      ..+.+.|+.+|.+.+.+++.++..+  ++++..+.|+.+..|.
T Consensus       161 ~~p~s~Yg~sK~~~E~~~~~~~~~~--g~~~~ilR~~~vyGp~  201 (370)
T PLN02695        161 AEPQDAYGLEKLATEELCKHYTKDF--GIECRIGRFHNIYGPF  201 (370)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHh--CCCEEEEEECCccCCC
Confidence            2345689999999999998877654  7888889998887763

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.64  E-value=1.3e-14  Score=132.69  Aligned_cols=172  Identities=16%  Similarity=0.062  Sum_probs=124.1

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhC--CCeEEEEecCc--chHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHH
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLE--GASVVVSSRKQ--KNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTI   84 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~--g~~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (226)
                      .+++|+|+||||+|.||++++++|+++  |++|+.++|..  +........  ....++.++.+|+++.+.++.++..  
T Consensus         3 ~~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~--~~~~~v~~~~~Dl~d~~~~~~~~~~--   78 (668)
T PLN02260          3 TYEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPS--KSSPNFKFVKGDIASADLVNYLLIT--   78 (668)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhc--ccCCCeEEEECCCCChHHHHHHHhh--
Confidence            467899999999999999999999998  67888888753  122111110  1134678889999999877665432  


Q ss_pred             HHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCC-----------
Q 027248           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP-----------  153 (226)
Q Consensus        85 ~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~-----------  153 (226)
                         ..+|+|||+|+.....     .+..+..+.+++|+.++.++++++...- .-.++|++||...+..           
T Consensus        79 ---~~~D~ViHlAa~~~~~-----~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~vkr~I~~SS~~vyg~~~~~~~~~~~E  149 (668)
T PLN02260         79 ---EGIDTIMHFAAQTHVD-----NSFGNSFEFTKNNIYGTHVLLEACKVTG-QIRRFIHVSTDEVYGETDEDADVGNHE  149 (668)
T ss_pred             ---cCCCEEEECCCccCch-----hhhhCHHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEcchHHhCCCccccccCccc
Confidence               3799999999975421     1122335678999999999999886531 1248999999754311           


Q ss_pred             ---CCCCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCC
Q 027248          154 ---QSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTH  195 (226)
Q Consensus       154 ---~~~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~  195 (226)
                         ..+...|+.||.+.+.+++.+..++  ++.+..+.|+.+.-|
T Consensus       150 ~~~~~p~~~Y~~sK~~aE~~v~~~~~~~--~l~~vilR~~~VyGp  192 (668)
T PLN02260        150 ASQLLPTNPYSATKAGAEMLVMAYGRSY--GLPVITTRGNNVYGP  192 (668)
T ss_pred             cCCCCCCCCcHHHHHHHHHHHHHHHHHc--CCCEEEECcccccCc
Confidence               1134679999999999999887765  677888888877655

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.63  E-value=1.6e-14  Score=120.19  Aligned_cols=161  Identities=20%  Similarity=0.197  Sum_probs=113.5

Q ss_pred             EEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCEE
Q 027248           15 AIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVV   93 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~l   93 (226)
                      |+||||+|.||.+++++|.++|+ .|++++|..... .. .++.     ...+..|+.+++.++.+.+.   .+.++|++
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~-~~~~-----~~~~~~d~~~~~~~~~~~~~---~~~~~D~v   70 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KF-LNLA-----DLVIADYIDKEDFLDRLEKG---AFGKIEAI   70 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hh-hhhh-----heeeeccCcchhHHHHHHhh---ccCCCCEE
Confidence            58999999999999999999997 688887765321 11 1111     12455688877766655442   24589999


Q ss_pred             EEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCC-----------CCCCchhhH
Q 027248           94 VSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP-----------QSSMAMYGV  162 (226)
Q Consensus        94 i~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~-----------~~~~~~Y~~  162 (226)
                      ||+|+...       .+.++.+..+++|+.++.++++++...   +.++|++||...+..           ..+...|+.
T Consensus        71 vh~A~~~~-------~~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~v~~SS~~vy~~~~~~~~e~~~~~~p~~~Y~~  140 (314)
T TIGR02197        71 FHQGACSD-------TTETDGEYMMENNYQYSKRLLDWCAEK---GIPFIYASSAATYGDGEAGFREGRELERPLNVYGY  140 (314)
T ss_pred             EECccccC-------ccccchHHHHHHHHHHHHHHHHHHHHh---CCcEEEEccHHhcCCCCCCcccccCcCCCCCHHHH
Confidence            99999643       123355778899999999999988753   347999999764421           124668999


Q ss_pred             hHHHHHHHHHHHHHHhCCCeEEEEEecCceeCC
Q 027248          163 TKTALLGLTKALAAEMAPDTRVNCVAPGFVPTH  195 (226)
Q Consensus       163 sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~  195 (226)
                      ||.+.+.+++.+..+...++.+..+.|+.+.-+
T Consensus       141 sK~~~e~~~~~~~~~~~~~~~~~~lR~~~vyG~  173 (314)
T TIGR02197       141 SKFLFDQYVRRRVLPEALSAQVVGLRYFNVYGP  173 (314)
T ss_pred             HHHHHHHHHHHHhHhhccCCceEEEEEeeccCC
Confidence            999999999865443233566777777666544

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.63  E-value=9.9e-15  Score=121.35  Aligned_cols=159  Identities=19%  Similarity=0.218  Sum_probs=112.4

Q ss_pred             EEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH--HhCCCCE
Q 027248           15 AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE--KFGKIDV   92 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~--~~~~id~   92 (226)
                      ++||||+|.||++++++|+++|++++++.|+....... ..         ...+|+.|..+.+++++.+.+  .++++|+
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~-~~---------~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~   71 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-VN---------LVDLDIADYMDKEDFLAQIMAGDDFGDIEA   71 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH-Hh---------hhhhhhhhhhhHHHHHHHHhcccccCCccE
Confidence            79999999999999999999999766666554332111 01         123577776666666665543  2458999


Q ss_pred             EEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCC-----------CCCCchhh
Q 027248           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP-----------QSSMAMYG  161 (226)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~-----------~~~~~~Y~  161 (226)
                      |||+||.... ..   .+.   +..+++|+.++.++++++...   +.++|++||...+..           ..+.+.|+
T Consensus        72 Vih~A~~~~~-~~---~~~---~~~~~~n~~~t~~ll~~~~~~---~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~  141 (308)
T PRK11150         72 IFHEGACSST-TE---WDG---KYMMDNNYQYSKELLHYCLER---EIPFLYASSAATYGGRTDDFIEEREYEKPLNVYG  141 (308)
T ss_pred             EEECceecCC-cC---CCh---HHHHHHHHHHHHHHHHHHHHc---CCcEEEEcchHHhCcCCCCCCccCCCCCCCCHHH
Confidence            9999986431 11   111   356899999999999998653   347999999854321           12356799


Q ss_pred             HhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCC
Q 027248          162 VTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTH  195 (226)
Q Consensus       162 ~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~  195 (226)
                      .||.+.+.+++.+..+.  ++.+..+.|+.+--|
T Consensus       142 ~sK~~~E~~~~~~~~~~--~~~~~~lR~~~vyG~  173 (308)
T PRK11150        142 YSKFLFDEYVRQILPEA--NSQICGFRYFNVYGP  173 (308)
T ss_pred             HHHHHHHHHHHHHHHHc--CCCEEEEeeeeecCC
Confidence            99999999988876553  677778888777655

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.63  E-value=2.6e-14  Score=120.89  Aligned_cols=161  Identities=13%  Similarity=0.102  Sum_probs=115.4

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhC-CCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCC-CHHHHHHHHHHHHHHhCCC
Q 027248           13 KVAIVTASTQGIGFGIAERLGLE-GASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS-NGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~-~~~~v~~~~~~~~~~~~~i   90 (226)
                      ++|+||||+|.||..++++|++. |++|+.++|+.++...    +.. ...+.++.+|++ +.+.+.++++       .+
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~----~~~-~~~~~~~~~Dl~~~~~~~~~~~~-------~~   69 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGD----LVN-HPRMHFFEGDITINKEWIEYHVK-------KC   69 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHH----hcc-CCCeEEEeCCCCCCHHHHHHHHc-------CC
Confidence            46999999999999999999986 6999999987643322    111 235778889998 5565544433       69


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCC----------------
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQ----------------  154 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~----------------  154 (226)
                      |+|||.|+......     ..++-+..+++|+.++.++++++...   +.++|++||...+...                
T Consensus        70 d~ViH~aa~~~~~~-----~~~~p~~~~~~n~~~~~~ll~aa~~~---~~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~  141 (347)
T PRK11908         70 DVILPLVAIATPAT-----YVKQPLRVFELDFEANLPIVRSAVKY---GKHLVFPSTSEVYGMCPDEEFDPEASPLVYGP  141 (347)
T ss_pred             CEEEECcccCChHH-----hhcCcHHHHHHHHHHHHHHHHHHHhc---CCeEEEEecceeeccCCCcCcCccccccccCc
Confidence            99999999743111     11233567899999999999988753   2589999997543210                


Q ss_pred             --CCCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCC
Q 027248          155 --SSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTH  195 (226)
Q Consensus       155 --~~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~  195 (226)
                        .+...|+.||.+.+.+.+.++.+.  ++.+..+.|+.+.-|
T Consensus       142 ~~~p~~~Y~~sK~~~e~~~~~~~~~~--~~~~~ilR~~~v~Gp  182 (347)
T PRK11908        142 INKPRWIYACSKQLMDRVIWAYGMEE--GLNFTLFRPFNWIGP  182 (347)
T ss_pred             CCCccchHHHHHHHHHHHHHHHHHHc--CCCeEEEeeeeeeCC
Confidence              122369999999999999887654  566667777766554

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.62  E-value=1.9e-14  Score=131.30  Aligned_cols=165  Identities=14%  Similarity=0.069  Sum_probs=121.4

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhC-CCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHH-HHHHHHHHHHHh
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLE-GASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQ-RKNLINQTIEKF   87 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-v~~~~~~~~~~~   87 (226)
                      ..+++|+||||+|.||.+++++|+++ |++|+.++|........    . ...++.++.+|+++.+. +++++       
T Consensus       313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~----~-~~~~~~~~~gDl~d~~~~l~~~l-------  380 (660)
T PRK08125        313 KRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRF----L-GHPRFHFVEGDISIHSEWIEYHI-------  380 (660)
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhh----c-CCCceEEEeccccCcHHHHHHHh-------
Confidence            45789999999999999999999986 79999999977543221    1 12357788899998665 33333       


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCC-------------
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQ-------------  154 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~-------------  154 (226)
                      ..+|++||.|+......     ..++.++.+++|+.++.++++++...   +.++|++||...+...             
T Consensus       381 ~~~D~ViHlAa~~~~~~-----~~~~~~~~~~~Nv~~t~~ll~a~~~~---~~~~V~~SS~~vyg~~~~~~~~E~~~~~~  452 (660)
T PRK08125        381 KKCDVVLPLVAIATPIE-----YTRNPLRVFELDFEENLKIIRYCVKY---NKRIIFPSTSEVYGMCTDKYFDEDTSNLI  452 (660)
T ss_pred             cCCCEEEECccccCchh-----hccCHHHHHHhhHHHHHHHHHHHHhc---CCeEEEEcchhhcCCCCCCCcCccccccc
Confidence            27999999999754211     11223467889999999999998764   2489999997543210             


Q ss_pred             --C---CCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCc
Q 027248          155 --S---SMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHF  196 (226)
Q Consensus       155 --~---~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~  196 (226)
                        |   +.+.|+.||.+.+.+++.++.++  ++++..+.|+.+.-|.
T Consensus       453 ~~p~~~p~s~Yg~sK~~~E~~~~~~~~~~--g~~~~ilR~~~vyGp~  497 (660)
T PRK08125        453 VGPINKQRWIYSVSKQLLDRVIWAYGEKE--GLRFTLFRPFNWMGPR  497 (660)
T ss_pred             cCCCCCCccchHHHHHHHHHHHHHHHHhc--CCceEEEEEceeeCCC
Confidence              1   22469999999999999887665  6788888888877653

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.61  E-value=2.2e-14  Score=116.40  Aligned_cols=156  Identities=23%  Similarity=0.252  Sum_probs=124.3

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHH---HHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK---LKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      +++|+||||+|-||.+.+.+|+++|+.|++++.-..........   +...+..+.+.+.|+.|.+.++++++..     
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~-----   76 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV-----   76 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc-----
Confidence            68999999999999999999999999999999866554443333   3333567999999999999999888865     


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCc-----------CCC-CC
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY-----------QPQ-SS  156 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~-----------~~~-~~  156 (226)
                      .+|.|+|-|+......+     .+.-......|+.|+++++.....+-.  ..+||.||.+.+           .+. .+
T Consensus        77 ~fd~V~Hfa~~~~vgeS-----~~~p~~Y~~nNi~gtlnlLe~~~~~~~--~~~V~sssatvYG~p~~ip~te~~~t~~p  149 (343)
T KOG1371|consen   77 KFDAVMHFAALAAVGES-----MENPLSYYHNNIAGTLNLLEVMKAHNV--KALVFSSSATVYGLPTKVPITEEDPTDQP  149 (343)
T ss_pred             CCceEEeehhhhccchh-----hhCchhheehhhhhHHHHHHHHHHcCC--ceEEEecceeeecCcceeeccCcCCCCCC
Confidence            79999999997653322     333478889999999999999887643  379999988754           112 26


Q ss_pred             CchhhHhHHHHHHHHHHHHHHhC
Q 027248          157 MAMYGVTKTALLGLTKALAAEMA  179 (226)
Q Consensus       157 ~~~Y~~sKaa~~~~~~~la~e~~  179 (226)
                      ...|+.+|.+++...+.+..-+.
T Consensus       150 ~~pyg~tK~~iE~i~~d~~~~~~  172 (343)
T KOG1371|consen  150 TNPYGKTKKAIEEIIHDYNKAYG  172 (343)
T ss_pred             CCcchhhhHHHHHHHHhhhcccc
Confidence            78899999999999998877754

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.60  E-value=5.3e-14  Score=116.81  Aligned_cols=161  Identities=25%  Similarity=0.218  Sum_probs=120.0

Q ss_pred             EEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC-CEE
Q 027248           15 AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI-DVV   93 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i-d~l   93 (226)
                      |+||||+|.||.+++++|.++|++|+.++|.........       ..+..+.+|+++.+.+...++       .. |.+
T Consensus         3 ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~-------~~~d~v   68 (314)
T COG0451           3 ILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL-------SGVEFVVLDLTDRDLVDELAK-------GVPDAV   68 (314)
T ss_pred             EEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc-------cccceeeecccchHHHHHHHh-------cCCCEE
Confidence            999999999999999999999999999999877654333       346678889999855555444       33 999


Q ss_pred             EEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCC-----------C--CCchh
Q 027248           94 VSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQ-----------S--SMAMY  160 (226)
Q Consensus        94 i~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~-----------~--~~~~Y  160 (226)
                      ||.|+.......  ..+  +....+.+|+.++.++++++..  ....++|+.||.+.....           +  +...|
T Consensus        69 ih~aa~~~~~~~--~~~--~~~~~~~~nv~gt~~ll~aa~~--~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~Y  142 (314)
T COG0451          69 IHLAAQSSVPDS--NAS--DPAEFLDVNVDGTLNLLEAARA--AGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPY  142 (314)
T ss_pred             EEccccCchhhh--hhh--CHHHHHHHHHHHHHHHHHHHHH--cCCCeEEEeCCCceECCCCCCCCcccccCCCCCCCHH
Confidence            999998652111  111  3456889999999999999988  234589996665533211           1  12259


Q ss_pred             hHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCcc
Q 027248          161 GVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFA  197 (226)
Q Consensus       161 ~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~  197 (226)
                      +.||...+.+++.+..  ..++.+..+.|+.+--|..
T Consensus       143 g~sK~~~E~~~~~~~~--~~~~~~~ilR~~~vyGp~~  177 (314)
T COG0451         143 GVSKLAAEQLLRAYAR--LYGLPVVILRPFNVYGPGD  177 (314)
T ss_pred             HHHHHHHHHHHHHHHH--HhCCCeEEEeeeeeeCCCC
Confidence            9999999999999888  2378888999887765543

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.59  E-value=5.2e-14  Score=115.77  Aligned_cols=142  Identities=23%  Similarity=0.265  Sum_probs=109.5

Q ss_pred             EEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCEEE
Q 027248           15 AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVV   94 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~li   94 (226)
                      ++||||+|.||.+++++|.++|++|++++|+                     .+|+.+.++++++++..     .+|++|
T Consensus         2 ilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~---------------------~~d~~~~~~~~~~~~~~-----~~d~vi   55 (287)
T TIGR01214         2 ILITGANGQLGRELVQQLSPEGRVVVALTSS---------------------QLDLTDPEALERLLRAI-----RPDAVV   55 (287)
T ss_pred             EEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc---------------------ccCCCCHHHHHHHHHhC-----CCCEEE
Confidence            7999999999999999999999999999885                     36999999988877642     689999


Q ss_pred             EcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCC-----------CCCCchhhHh
Q 027248           95 SNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP-----------QSSMAMYGVT  163 (226)
Q Consensus        95 ~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~-----------~~~~~~Y~~s  163 (226)
                      |+||.... .    .........+++|+.++.++++++...   +.++|++||...+.+           ..+...|+.+
T Consensus        56 ~~a~~~~~-~----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~~  127 (287)
T TIGR01214        56 NTAAYTDV-D----GAESDPEKAFAVNALAPQNLARAAARH---GARLVHISTDYVFDGEGKRPYREDDATNPLNVYGQS  127 (287)
T ss_pred             ECCccccc-c----ccccCHHHHHHHHHHHHHHHHHHHHHc---CCeEEEEeeeeeecCCCCCCCCCCCCCCCcchhhHH
Confidence            99997531 1    112234677899999999999987653   248999999754321           1235689999


Q ss_pred             HHHHHHHHHHHHHHhCCCeEEEEEecCceeCCc
Q 027248          164 KTALLGLTKALAAEMAPDTRVNCVAPGFVPTHF  196 (226)
Q Consensus       164 Kaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~  196 (226)
                      |.+.+.+++.+      +.++..+.|+.+..+.
T Consensus       128 K~~~E~~~~~~------~~~~~ilR~~~v~G~~  154 (287)
T TIGR01214       128 KLAGEQAIRAA------GPNALIVRTSWLYGGG  154 (287)
T ss_pred             HHHHHHHHHHh------CCCeEEEEeeecccCC
Confidence            99999888765      3467788888876554

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.58  E-value=9.5e-14  Score=120.85  Aligned_cols=165  Identities=18%  Similarity=0.086  Sum_probs=115.7

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      ...++++|+||||+|.||+.++++|+++|++|++++|............. ...++..+..|+.++..            
T Consensus       115 ~~~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~-~~~~~~~i~~D~~~~~l------------  181 (442)
T PLN02206        115 LKRKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHF-SNPNFELIRHDVVEPIL------------  181 (442)
T ss_pred             cccCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhc-cCCceEEEECCccChhh------------
Confidence            34567899999999999999999999999999999876433222111111 12346677788866531            


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcC---------------
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ---------------  152 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~---------------  152 (226)
                      ..+|+|||.|+.... ..    ..++..+.+++|+.++.++++++...   +.++|++||...+.               
T Consensus       182 ~~~D~ViHlAa~~~~-~~----~~~~p~~~~~~Nv~gt~nLleaa~~~---g~r~V~~SS~~VYg~~~~~p~~E~~~~~~  253 (442)
T PLN02206        182 LEVDQIYHLACPASP-VH----YKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQVETYWGNV  253 (442)
T ss_pred             cCCCEEEEeeeecch-hh----hhcCHHHHHHHHHHHHHHHHHHHHHh---CCEEEEECChHHhCCCCCCCCCccccccC
Confidence            268999999986531 11    11223678899999999999988654   24899999986542               


Q ss_pred             -CCCCCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCC
Q 027248          153 -PQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTH  195 (226)
Q Consensus       153 -~~~~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~  195 (226)
                       +......|+.||.+.+.+++.+..++  ++++..+.|+.+.-|
T Consensus       254 ~P~~~~s~Y~~SK~~aE~~~~~y~~~~--g~~~~ilR~~~vyGp  295 (442)
T PLN02206        254 NPIGVRSCYDEGKRTAETLTMDYHRGA--NVEVRIARIFNTYGP  295 (442)
T ss_pred             CCCCccchHHHHHHHHHHHHHHHHHHh--CCCeEEEEeccccCC
Confidence             11124679999999999998876654  566666776655443

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.58  E-value=5.6e-14  Score=116.58  Aligned_cols=144  Identities=19%  Similarity=0.178  Sum_probs=105.4

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCEE
Q 027248           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVV   93 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~l   93 (226)
                      ++|||||+|.||++++++|.++| +|+.++|...                 .+..|++|.+.++++++..     ++|+|
T Consensus         2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-----------------~~~~Dl~d~~~~~~~~~~~-----~~D~V   58 (299)
T PRK09987          2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHST-----------------DYCGDFSNPEGVAETVRKI-----RPDVI   58 (299)
T ss_pred             eEEEECCCCHHHHHHHHHhhccC-CEEEeccccc-----------------cccCCCCCHHHHHHHHHhc-----CCCEE
Confidence            59999999999999999999999 7888888532                 2356999999988877742     68999


Q ss_pred             EEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcC-----------CCCCCchhhH
Q 027248           94 VSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ-----------PQSSMAMYGV  162 (226)
Q Consensus        94 i~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~-----------~~~~~~~Y~~  162 (226)
                      ||+|+.... .    ...++-+..+.+|+.++.++++++...   +.++|++||...+.           +..+...|+.
T Consensus        59 ih~Aa~~~~-~----~~~~~~~~~~~~N~~~~~~l~~aa~~~---g~~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Yg~  130 (299)
T PRK09987         59 VNAAAHTAV-D----KAESEPEFAQLLNATSVEAIAKAANEV---GAWVVHYSTDYVFPGTGDIPWQETDATAPLNVYGE  130 (299)
T ss_pred             EECCccCCc-c----hhhcCHHHHHHHHHHHHHHHHHHHHHc---CCeEEEEccceEECCCCCCCcCCCCCCCCCCHHHH
Confidence            999997542 1    111223566789999999999988764   34799999965431           1124567999


Q ss_pred             hHHHHHHHHHHHHHHhCCCeEEEEEecCceeC
Q 027248          163 TKTALLGLTKALAAEMAPDTRVNCVAPGFVPT  194 (226)
Q Consensus       163 sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t  194 (226)
                      ||.+.+.+++.+..+      ...+.|+++.-
T Consensus       131 sK~~~E~~~~~~~~~------~~ilR~~~vyG  156 (299)
T PRK09987        131 TKLAGEKALQEHCAK------HLIFRTSWVYA  156 (299)
T ss_pred             HHHHHHHHHHHhCCC------EEEEecceecC
Confidence            999999988765432      24445555443

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.55  E-value=1.3e-13  Score=114.23  Aligned_cols=148  Identities=14%  Similarity=0.111  Sum_probs=109.9

Q ss_pred             EEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCEEEE
Q 027248           16 IVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVS   95 (226)
Q Consensus        16 lItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~li~   95 (226)
                      +||||+|.||..++++|.+.|++|+++.+..                    .+|+++.++++.+++..     .+|+|||
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~~--------------------~~Dl~~~~~l~~~~~~~-----~~d~Vih   55 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTHK--------------------ELDLTRQADVEAFFAKE-----KPTYVIL   55 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeeccc--------------------cCCCCCHHHHHHHHhcc-----CCCEEEE
Confidence            5899999999999999999999877664321                    36999999888876652     6899999


Q ss_pred             cCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCC---------------C-CCCch
Q 027248           96 NAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP---------------Q-SSMAM  159 (226)
Q Consensus        96 nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~---------------~-~~~~~  159 (226)
                      +|+.... ...   ..++....+++|+.++..+++++...  +-.++|++||...+.+               . |....
T Consensus        56 ~A~~~~~-~~~---~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~  129 (306)
T PLN02725         56 AAAKVGG-IHA---NMTYPADFIRENLQIQTNVIDAAYRH--GVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEW  129 (306)
T ss_pred             eeeeecc-cch---hhhCcHHHHHHHhHHHHHHHHHHHHc--CCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcch
Confidence            9987431 100   11123456889999999999999764  2348999999754321               1 11235


Q ss_pred             hhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCc
Q 027248          160 YGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHF  196 (226)
Q Consensus       160 Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~  196 (226)
                      |+.||.+.+.+.+.+..+.  ++++..+.|+.+--+.
T Consensus       130 Y~~sK~~~e~~~~~~~~~~--~~~~~~~R~~~vyG~~  164 (306)
T PLN02725        130 YAIAKIAGIKMCQAYRIQY--GWDAISGMPTNLYGPH  164 (306)
T ss_pred             HHHHHHHHHHHHHHHHHHh--CCCEEEEEecceeCCC
Confidence            9999999999888877665  6888899998887663

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.53  E-value=2.2e-13  Score=113.92  Aligned_cols=146  Identities=14%  Similarity=0.066  Sum_probs=107.0

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCEE
Q 027248           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVV   93 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~l   93 (226)
                      +++||||+|.||++++++|.++|++|++++|+.++...    +..  ..+.++.+|+++++++..+++       .+|++
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~----l~~--~~v~~v~~Dl~d~~~l~~al~-------g~d~V   68 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASF----LKE--WGAELVYGDLSLPETLPPSFK-------GVTAI   68 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhh----Hhh--cCCEEEECCCCCHHHHHHHHC-------CCCEE
Confidence            59999999999999999999999999999998654322    111  246788999999998776665       78999


Q ss_pred             EEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHhHHHHHHHHHH
Q 027248           94 VSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKA  173 (226)
Q Consensus        94 i~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~  173 (226)
                      ||.++...  .        +.....++|+.++.++.+++...-  -.++|++||..+..  .+...|..+|...+.+.+.
T Consensus        69 i~~~~~~~--~--------~~~~~~~~~~~~~~~l~~aa~~~g--vkr~I~~Ss~~~~~--~~~~~~~~~K~~~e~~l~~  134 (317)
T CHL00194         69 IDASTSRP--S--------DLYNAKQIDWDGKLALIEAAKAAK--IKRFIFFSILNAEQ--YPYIPLMKLKSDIEQKLKK  134 (317)
T ss_pred             EECCCCCC--C--------CccchhhhhHHHHHHHHHHHHHcC--CCEEEEeccccccc--cCCChHHHHHHHHHHHHHH
Confidence            99876422  1        113456688999999988887642  23899999864321  2345688899887776542


Q ss_pred             HHHHhCCCeEEEEEecCce
Q 027248          174 LAAEMAPDTRVNCVAPGFV  192 (226)
Q Consensus       174 la~e~~~~i~v~~v~Pg~v  192 (226)
                            .++.+..+.|+.+
T Consensus       135 ------~~l~~tilRp~~~  147 (317)
T CHL00194        135 ------SGIPYTIFRLAGF  147 (317)
T ss_pred             ------cCCCeEEEeecHH
Confidence                  2677788888754

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=99.53  E-value=8.4e-13  Score=107.71  Aligned_cols=180  Identities=15%  Similarity=0.150  Sum_probs=150.6

Q ss_pred             CEEEEEcC-CCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC---
Q 027248           13 KVAIVTAS-TQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG---   88 (226)
Q Consensus        13 k~vlItGa-~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~---   88 (226)
                      ++|||.|. +.-|++.++.-|-++|+-|+++..+.+..+...++-   ..++.....|..++.++...+.++.+...   
T Consensus         4 evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e~---~~dI~~L~ld~~~~~~~~~~l~~f~~~L~~p~   80 (299)
T PF08643_consen    4 EVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVESED---RPDIRPLWLDDSDPSSIHASLSRFASLLSRPH   80 (299)
T ss_pred             eEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhcc---CCCCCCcccCCCCCcchHHHHHHHHHHhcCCC
Confidence            67899996 799999999999999999999999887765554443   34577888899888888888888776554   


Q ss_pred             -----------CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc----CCEEEEEe-ccCCcC
Q 027248           89 -----------KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK----GSSVVLIS-SIAGYQ  152 (226)
Q Consensus        89 -----------~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~----~~~iv~~s-S~~~~~  152 (226)
                                 .+..+|.........++++.++.+.|.+.++.|+..++.+++.++|+++.    +.+||.++ |..+..
T Consensus        81 ~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Psi~ssl  160 (299)
T PF08643_consen   81 VPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPSISSSL  160 (299)
T ss_pred             CCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCchhhcc
Confidence                       34456666666656889999999999999999999999999999999965    45555554 666777


Q ss_pred             CCCCCchhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCC
Q 027248          153 PQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTH  195 (226)
Q Consensus       153 ~~~~~~~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~  195 (226)
                      ..|..+.-.....++.+|+++|++|+.+ +|.|..+.-|.++-.
T Consensus       161 ~~PfhspE~~~~~al~~~~~~LrrEl~~~~I~V~~i~LG~l~i~  204 (299)
T PF08643_consen  161 NPPFHSPESIVSSALSSFFTSLRRELRPHNIDVTQIKLGNLDIG  204 (299)
T ss_pred             CCCccCHHHHHHHHHHHHHHHHHHHhhhcCCceEEEEeeeeccc
Confidence            8899999999999999999999999997 999999999988866

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.53  E-value=5.4e-13  Score=115.99  Aligned_cols=161  Identities=17%  Similarity=0.076  Sum_probs=113.2

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id   91 (226)
                      ..+|+||||+|.||..++++|+++|++|++++|.............. ..++.++..|+.+..     +       ..+|
T Consensus       120 ~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~-~~~~~~~~~Di~~~~-----~-------~~~D  186 (436)
T PLN02166        120 RLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFG-NPRFELIRHDVVEPI-----L-------LEVD  186 (436)
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhcc-CCceEEEECcccccc-----c-------cCCC
Confidence            45799999999999999999999999999999864332222211111 234667778886542     1       2689


Q ss_pred             EEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcC----------------CCC
Q 027248           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ----------------PQS  155 (226)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~----------------~~~  155 (226)
                      +|||.|+.... ...    ..+-.+.+++|+.++.++++++...   +.++|++||...+.                +..
T Consensus       187 ~ViHlAa~~~~-~~~----~~~p~~~~~~Nv~gT~nLleaa~~~---g~r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~  258 (436)
T PLN02166        187 QIYHLACPASP-VHY----KYNPVKTIKTNVMGTLNMLGLAKRV---GARFLLTSTSEVYGDPLEHPQKETYWGNVNPIG  258 (436)
T ss_pred             EEEECceeccc-hhh----ccCHHHHHHHHHHHHHHHHHHHHHh---CCEEEEECcHHHhCCCCCCCCCccccccCCCCC
Confidence            99999986531 111    1123578899999999999998764   24899999986432                112


Q ss_pred             CCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCC
Q 027248          156 SMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTH  195 (226)
Q Consensus       156 ~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~  195 (226)
                      ....|+.||.+.+.+++.+....  ++++..+.|+.+--|
T Consensus       259 p~s~Yg~SK~~aE~~~~~y~~~~--~l~~~ilR~~~vYGp  296 (436)
T PLN02166        259 ERSCYDEGKRTAETLAMDYHRGA--GVEVRIARIFNTYGP  296 (436)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHh--CCCeEEEEEccccCC
Confidence            24579999999999998877654  566667777655544

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.50  E-value=1.8e-12  Score=99.65  Aligned_cols=141  Identities=19%  Similarity=0.216  Sum_probs=103.6

Q ss_pred             EEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCEEE
Q 027248           15 AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVV   94 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~li   94 (226)
                      |+|+||+|.+|+.++++|+++|++|+++.|++++.+.        ..++.++.+|+.+++++.+.++       ..|++|
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~--------~~~~~~~~~d~~d~~~~~~al~-------~~d~vi   65 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED--------SPGVEIIQGDLFDPDSVKAALK-------GADAVI   65 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH--------CTTEEEEESCTTCHHHHHHHHT-------TSSEEE
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc--------ccccccceeeehhhhhhhhhhh-------hcchhh
Confidence            6899999999999999999999999999999987666        4578999999999988777666       899999


Q ss_pred             EcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCC---------chhhHhHH
Q 027248           95 SNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSM---------AMYGVTKT  165 (226)
Q Consensus        95 ~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~---------~~Y~~sKa  165 (226)
                      +++|....          +        ....-.+++++...  +-.++|++||.......+..         ..|...|.
T Consensus        66 ~~~~~~~~----------~--------~~~~~~~~~a~~~~--~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (183)
T PF13460_consen   66 HAAGPPPK----------D--------VDAAKNIIEAAKKA--GVKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARDKR  125 (183)
T ss_dssp             ECCHSTTT----------H--------HHHHHHHHHHHHHT--TSSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHHHH
T ss_pred             hhhhhhcc----------c--------cccccccccccccc--ccccceeeeccccCCCCCcccccccccchhhhHHHHH
Confidence            99986431          1        22222333333332  23489999999876543331         24666665


Q ss_pred             HHHHHHHHHHHHhCCCeEEEEEecCceeCCc
Q 027248          166 ALLGLTKALAAEMAPDTRVNCVAPGFVPTHF  196 (226)
Q Consensus       166 a~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~  196 (226)
                      ..+.+.+    +  .+++...+.|+++..+.
T Consensus       126 ~~e~~~~----~--~~~~~~ivrp~~~~~~~  150 (183)
T PF13460_consen  126 EAEEALR----E--SGLNWTIVRPGWIYGNP  150 (183)
T ss_dssp             HHHHHHH----H--STSEEEEEEESEEEBTT
T ss_pred             HHHHHHH----h--cCCCEEEEECcEeEeCC
Confidence            5544331    2  28999999999988765

...

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.49  E-value=1.9e-12  Score=104.60  Aligned_cols=164  Identities=20%  Similarity=0.123  Sum_probs=100.7

Q ss_pred             EEcCCCchhHHHHHHHHhCCC--eEEEEecCcch---HHHHHHHHH----------hcCCcEEEEEeeCCCHHH-H-HHH
Q 027248           17 VTASTQGIGFGIAERLGLEGA--SVVVSSRKQKN---VDEAVVKLK----------ARGIEVIGVVCHVSNGQQ-R-KNL   79 (226)
Q Consensus        17 ItGa~~giG~a~~~~l~~~g~--~v~~~~r~~~~---~~~~~~~~~----------~~~~~~~~~~~Dv~~~~~-v-~~~   79 (226)
                      ||||||.||..+.++|++++.  +|+++.|..+.   .+...+.+.          ....++.++.+|++++.- + +..
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999986  89999998743   222222211          125689999999999641 1 112


Q ss_pred             HHHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcC--C----
Q 027248           80 INQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ--P----  153 (226)
Q Consensus        80 ~~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~--~----  153 (226)
                      .+++.   ..+|++||+|+......        .+++..++|+.|+.++++.+...-.  .+++++||.....  .    
T Consensus        81 ~~~L~---~~v~~IiH~Aa~v~~~~--------~~~~~~~~NV~gt~~ll~la~~~~~--~~~~~iSTa~v~~~~~~~~~  147 (249)
T PF07993_consen   81 YQELA---EEVDVIIHCAASVNFNA--------PYSELRAVNVDGTRNLLRLAAQGKR--KRFHYISTAYVAGSRPGTIE  147 (249)
T ss_dssp             HHHHH---HH--EEEE--SS-SBS---------S--EEHHHHHHHHHHHHHHHTSSS-----EEEEEEGGGTTS-TTT--
T ss_pred             hhccc---cccceeeecchhhhhcc--------cchhhhhhHHHHHHHHHHHHHhccC--cceEEeccccccCCCCCccc
Confidence            22222   27999999999765222        2345678999999999999985322  2899999942211  1    


Q ss_pred             --------------CCCCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCC
Q 027248          154 --------------QSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTH  195 (226)
Q Consensus       154 --------------~~~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~  195 (226)
                                    ......|..||...+.+.+..+.+.  |+.+..+.||.|-..
T Consensus       148 ~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~--g~p~~I~Rp~~i~g~  201 (249)
T PF07993_consen  148 EKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRH--GLPVTIYRPGIIVGD  201 (249)
T ss_dssp             SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH-----EEEEEE-EEE-S
T ss_pred             ccccccccccchhhccCCccHHHHHHHHHHHHHHHHhcC--CceEEEEecCccccc
Confidence                          1234579999999999999888764  678889999988663

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PLN02996 fatty acyl-CoA reductase

Probab=99.48  E-value=3.5e-12  Score=112.47  Aligned_cols=169  Identities=18%  Similarity=0.144  Sum_probs=118.0

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCC---CeEEEEecCcch---HHHHHHHHH---------hc---------CCcE
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEG---ASVVVSSRKQKN---VDEAVVKLK---------AR---------GIEV   63 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g---~~v~~~~r~~~~---~~~~~~~~~---------~~---------~~~~   63 (226)
                      ..++||+++||||||.||..++++|++.+   -+|+++.|....   .+....++.         +.         ..++
T Consensus         7 ~~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv   86 (491)
T PLN02996          7 QFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKV   86 (491)
T ss_pred             HHhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCE
Confidence            35789999999999999999999999864   357888887542   111111111         10         1468


Q ss_pred             EEEEeeCCCH-------HHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 027248           64 IGVVCHVSNG-------QQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHL  136 (226)
Q Consensus        64 ~~~~~Dv~~~-------~~v~~~~~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l  136 (226)
                      .++.+|++++       +..+.+++       .+|+|||+|+.... .       ++.+..+++|+.|+.++++++...-
T Consensus        87 ~~i~GDl~~~~LGLs~~~~~~~l~~-------~vD~ViH~AA~v~~-~-------~~~~~~~~~Nv~gt~~ll~~a~~~~  151 (491)
T PLN02996         87 TPVPGDISYDDLGVKDSNLREEMWK-------EIDIVVNLAATTNF-D-------ERYDVALGINTLGALNVLNFAKKCV  151 (491)
T ss_pred             EEEecccCCcCCCCChHHHHHHHHh-------CCCEEEECccccCC-c-------CCHHHHHHHHHHHHHHHHHHHHhcC
Confidence            8999999843       33333333       79999999997541 1       2357788999999999999886531


Q ss_pred             hcCCEEEEEeccCCcCCCC-------------------------------------------------------------
Q 027248          137 QKGSSVVLISSIAGYQPQS-------------------------------------------------------------  155 (226)
Q Consensus       137 ~~~~~iv~~sS~~~~~~~~-------------------------------------------------------------  155 (226)
                       +-.++|++||........                                                             
T Consensus       152 -~~k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (491)
T PLN02996        152 -KVKMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLH  230 (491)
T ss_pred             -CCCeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhC
Confidence             123799999886531100                                                             


Q ss_pred             -CCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCc
Q 027248          156 -SMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHF  196 (226)
Q Consensus       156 -~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~  196 (226)
                       ....|+.||+..+.+++.++    .++.+..+.|+.|..+.
T Consensus       231 ~~pn~Y~~TK~~aE~lv~~~~----~~lpv~i~RP~~V~G~~  268 (491)
T PLN02996        231 GWPNTYVFTKAMGEMLLGNFK----ENLPLVIIRPTMITSTY  268 (491)
T ss_pred             CCCCchHhhHHHHHHHHHHhc----CCCCEEEECCCEeccCC
Confidence             12359999999999887542    37888999998886654

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.46  E-value=1.3e-12  Score=107.70  Aligned_cols=142  Identities=20%  Similarity=0.262  Sum_probs=101.7

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCEE
Q 027248           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVV   93 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~l   93 (226)
                      +++|||++|-||.++.++|.++|++++.+.|.                     .+|+++.+.+.+++++.     ++|++
T Consensus         2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~---------------------~~dl~d~~~~~~~~~~~-----~pd~V   55 (286)
T PF04321_consen    2 RILITGASGFLGSALARALKERGYEVIATSRS---------------------DLDLTDPEAVAKLLEAF-----KPDVV   55 (286)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTTSEEEEEESTT---------------------CS-TTSHHHHHHHHHHH-------SEE
T ss_pred             EEEEECCCCHHHHHHHHHHhhCCCEEEEeCch---------------------hcCCCCHHHHHHHHHHh-----CCCeE
Confidence            48999999999999999999999999999886                     46999999998888866     79999


Q ss_pred             EEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCC-----------CCCchhhH
Q 027248           94 VSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQ-----------SSMAMYGV  162 (226)
Q Consensus        94 i~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~-----------~~~~~Y~~  162 (226)
                      ||+||....     +....+-+..+.+|+.++.++.+++...   +.++|++||...+.+.           .+...|+.
T Consensus        56 in~aa~~~~-----~~ce~~p~~a~~iN~~~~~~la~~~~~~---~~~li~~STd~VFdG~~~~~y~E~d~~~P~~~YG~  127 (286)
T PF04321_consen   56 INCAAYTNV-----DACEKNPEEAYAINVDATKNLAEACKER---GARLIHISTDYVFDGDKGGPYTEDDPPNPLNVYGR  127 (286)
T ss_dssp             EE------H-----HHHHHSHHHHHHHHTHHHHHHHHHHHHC---T-EEEEEEEGGGS-SSTSSSB-TTS----SSHHHH
T ss_pred             eccceeecH-----HhhhhChhhhHHHhhHHHHHHHHHHHHc---CCcEEEeeccEEEcCCcccccccCCCCCCCCHHHH
Confidence            999997531     1122334678999999999999998763   5689999998655332           24678999


Q ss_pred             hHHHHHHHHHHHHHHhCCCeEEEEEecCceeCC
Q 027248          163 TKTALLGLTKALAAEMAPDTRVNCVAPGFVPTH  195 (226)
Q Consensus       163 sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~  195 (226)
                      +|...+...+..    .+  +...+.++++-.+
T Consensus       128 ~K~~~E~~v~~~----~~--~~~IlR~~~~~g~  154 (286)
T PF04321_consen  128 SKLEGEQAVRAA----CP--NALILRTSWVYGP  154 (286)
T ss_dssp             HHHHHHHHHHHH-----S--SEEEEEE-SEESS
T ss_pred             HHHHHHHHHHHh----cC--CEEEEecceeccc
Confidence            999988877762    22  3556677776655

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.45  E-value=4e-12  Score=116.13  Aligned_cols=162  Identities=23%  Similarity=0.115  Sum_probs=113.2

Q ss_pred             EEEEEcCCCchhHHHHHHHH--hCCCeEEEEecCcchHHHHHHHHHhcC-CcEEEEEeeCCCHHHH--HHHHHHHHHHhC
Q 027248           14 VAIVTASTQGIGFGIAERLG--LEGASVVVSSRKQKNVDEAVVKLKARG-IEVIGVVCHVSNGQQR--KNLINQTIEKFG   88 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~--~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v--~~~~~~~~~~~~   88 (226)
                      +++||||+|.||++++++|+  +.|++|++++|+... ..........+ .++.++.+|+++++..  ...++++    .
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~-~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l----~   76 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL-SRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL----G   76 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH-HHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh----c
Confidence            59999999999999999999  579999999996532 22221111111 4678889999985320  1112222    4


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCC-------------CC
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP-------------QS  155 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~-------------~~  155 (226)
                      .+|++||+||.... .    .   ...+..++|+.++.++++++...  +..++|++||......             ..
T Consensus        77 ~~D~Vih~Aa~~~~-~----~---~~~~~~~~nv~gt~~ll~~a~~~--~~~~~v~~SS~~v~g~~~~~~~e~~~~~~~~  146 (657)
T PRK07201         77 DIDHVVHLAAIYDL-T----A---DEEAQRAANVDGTRNVVELAERL--QAATFHHVSSIAVAGDYEGVFREDDFDEGQG  146 (657)
T ss_pred             CCCEEEECceeecC-C----C---CHHHHHHHHhHHHHHHHHHHHhc--CCCeEEEEeccccccCccCccccccchhhcC
Confidence            89999999997531 1    1   12456688999999999887653  2358999999865421             11


Q ss_pred             CCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCC
Q 027248          156 SMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTH  195 (226)
Q Consensus       156 ~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~  195 (226)
                      ....|+.||...+.+.+.     ..++++..+.|+.+-.+
T Consensus       147 ~~~~Y~~sK~~~E~~~~~-----~~g~~~~ilRp~~v~G~  181 (657)
T PRK07201        147 LPTPYHRTKFEAEKLVRE-----ECGLPWRVYRPAVVVGD  181 (657)
T ss_pred             CCCchHHHHHHHHHHHHH-----cCCCcEEEEcCCeeeec
Confidence            235699999999988753     23788999999988654

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.40  E-value=6.1e-12  Score=101.82  Aligned_cols=126  Identities=21%  Similarity=0.276  Sum_probs=104.2

Q ss_pred             EEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCEEE
Q 027248           15 AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVV   94 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~li   94 (226)
                      ++|||++|-+|.++.++|. .+.+|+.++|..                     +|++|++.+.+++.+.     ++|++|
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~---------------------~Ditd~~~v~~~i~~~-----~PDvVI   55 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIATDRAE---------------------LDITDPDAVLEVIRET-----RPDVVI   55 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEeccCcc---------------------ccccChHHHHHHHHhh-----CCCEEE
Confidence            8999999999999999999 668899998855                     5999999999998876     899999


Q ss_pred             EcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCC-----------CCCchhhHh
Q 027248           95 SNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQ-----------SSMAMYGVT  163 (226)
Q Consensus        95 ~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~-----------~~~~~Y~~s  163 (226)
                      |+|++....+     -..+-+..+.+|..|+.++.+++...   +.++|++|+...+.+.           .+...||.|
T Consensus        56 n~AAyt~vD~-----aE~~~e~A~~vNa~~~~~lA~aa~~~---ga~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG~s  127 (281)
T COG1091          56 NAAAYTAVDK-----AESEPELAFAVNATGAENLARAAAEV---GARLVHISTDYVFDGEKGGPYKETDTPNPLNVYGRS  127 (281)
T ss_pred             ECcccccccc-----ccCCHHHHHHhHHHHHHHHHHHHHHh---CCeEEEeecceEecCCCCCCCCCCCCCCChhhhhHH
Confidence            9999875221     12234788999999999999999765   5689999998876443           346689999


Q ss_pred             HHHHHHHHHHHH
Q 027248          164 KTALLGLTKALA  175 (226)
Q Consensus       164 Kaa~~~~~~~la  175 (226)
                      |.+.+..++...
T Consensus       128 Kl~GE~~v~~~~  139 (281)
T COG1091         128 KLAGEEAVRAAG  139 (281)
T ss_pred             HHHHHHHHHHhC
Confidence            999999887654

>PLN02778 3,5-epimerase/4-reductase

Probab=99.39  E-value=1.3e-11  Score=102.38  Aligned_cols=131  Identities=17%  Similarity=0.087  Sum_probs=89.7

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id   91 (226)
                      .++++||||+|.||..++++|.++|++|+...                        .|+++.+.+...++.     .++|
T Consensus         9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~------------------------~~~~~~~~v~~~l~~-----~~~D   59 (298)
T PLN02778          9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS------------------------GRLENRASLEADIDA-----VKPT   59 (298)
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCEEEEec------------------------CccCCHHHHHHHHHh-----cCCC
Confidence            46799999999999999999999999986432                        244455555444442     2799


Q ss_pred             EEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCc--------------C----C
Q 027248           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY--------------Q----P  153 (226)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~--------------~----~  153 (226)
                      ++||.||.... ... +...++-.+.+++|+.++.++++++...   +.+.+++||...+              .    +
T Consensus        60 ~ViH~Aa~~~~-~~~-~~~~~~p~~~~~~Nv~gt~~ll~aa~~~---gv~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p  134 (298)
T PLN02778         60 HVFNAAGVTGR-PNV-DWCESHKVETIRANVVGTLTLADVCRER---GLVLTNYATGCIFEYDDAHPLGSGIGFKEEDTP  134 (298)
T ss_pred             EEEECCcccCC-CCc-hhhhhCHHHHHHHHHHHHHHHHHHHHHh---CCCEEEEecceEeCCCCCCCcccCCCCCcCCCC
Confidence            99999997642 110 1112334678899999999999998764   2234455543211              0    1


Q ss_pred             CCCCchhhHhHHHHHHHHHHHHH
Q 027248          154 QSSMAMYGVTKTALLGLTKALAA  176 (226)
Q Consensus       154 ~~~~~~Y~~sKaa~~~~~~~la~  176 (226)
                      .+..+.|+.||.+.+.+++.++.
T Consensus       135 ~~~~s~Yg~sK~~~E~~~~~y~~  157 (298)
T PLN02778        135 NFTGSFYSKTKAMVEELLKNYEN  157 (298)
T ss_pred             CCCCCchHHHHHHHHHHHHHhhc
Confidence            12236899999999999987653

>PRK05865 hypothetical protein; Provisional

Probab=99.38  E-value=2.1e-11  Score=112.60  Aligned_cols=130  Identities=17%  Similarity=0.139  Sum_probs=100.6

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCEE
Q 027248           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVV   93 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~l   93 (226)
                      +++||||+|.||++++++|+++|++|++++|+....      .   ...+.++.+|+++.++++++++       .+|++
T Consensus         2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~---~~~v~~v~gDL~D~~~l~~al~-------~vD~V   65 (854)
T PRK05865          2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------W---PSSADFIAADIRDATAVESAMT-------GADVV   65 (854)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------c---ccCceEEEeeCCCHHHHHHHHh-------CCCEE
Confidence            599999999999999999999999999999975321      1   1246678999999998877765       68999


Q ss_pred             EEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHhHHHHHHHHHH
Q 027248           94 VSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKA  173 (226)
Q Consensus        94 i~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~  173 (226)
                      ||+|+...   .           .+++|+.++.++++++...  ..+++|++||..              |.+.+.+.+ 
T Consensus        66 VHlAa~~~---~-----------~~~vNv~GT~nLLeAa~~~--gvkr~V~iSS~~--------------K~aaE~ll~-  114 (854)
T PRK05865         66 AHCAWVRG---R-----------NDHINIDGTANVLKAMAET--GTGRIVFTSSGH--------------QPRVEQMLA-  114 (854)
T ss_pred             EECCCccc---c-----------hHHHHHHHHHHHHHHHHHc--CCCeEEEECCcH--------------HHHHHHHHH-
Confidence            99998632   1           3578999999888877543  235899999863              877776653 


Q ss_pred             HHHHhCCCeEEEEEecCceeCC
Q 027248          174 LAAEMAPDTRVNCVAPGFVPTH  195 (226)
Q Consensus       174 la~e~~~~i~v~~v~Pg~v~t~  195 (226)
                         ++  ++.+..+.|+.+.-|
T Consensus       115 ---~~--gl~~vILRp~~VYGP  131 (854)
T PRK05865        115 ---DC--GLEWVAVRCALIFGR  131 (854)
T ss_pred             ---Hc--CCCEEEEEeceEeCC
Confidence               22  677888888877655

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.37  E-value=1.1e-11  Score=103.83  Aligned_cols=170  Identities=16%  Similarity=0.090  Sum_probs=123.2

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCC--CeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEG--ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      ++++++||||+|.+|++++++|.+.+  .++.+++..+....-..++.......+..+.+|+.+...+...+.       
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~-------   75 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQ-------   75 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhcc-------
Confidence            46889999999999999999999998  779999988753222222222245678899999999998877766       


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcC------------CCC-
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ------------PQS-  155 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~------------~~~-  155 (226)
                      .. .+||+|....  ..   ....+-+..+++|+.|+-++..++...-.+  ++|++||.....            +.| 
T Consensus        76 ~~-~Vvh~aa~~~--~~---~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~--~lIYtSs~~Vvf~g~~~~n~~E~~p~p~  147 (361)
T KOG1430|consen   76 GA-VVVHCAASPV--PD---FVENDRDLAMRVNVNGTLNVIEACKELGVK--RLIYTSSAYVVFGGEPIINGDESLPYPL  147 (361)
T ss_pred             Cc-eEEEeccccC--cc---ccccchhhheeecchhHHHHHHHHHHhCCC--EEEEecCceEEeCCeecccCCCCCCCcc
Confidence            55 5665555432  11   112245788999999999999999876444  899999987642            233 


Q ss_pred             -CCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCcc
Q 027248          156 -SMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFA  197 (226)
Q Consensus       156 -~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~  197 (226)
                       ....|+.||+-.+.+.+..+.  ..+....++.|-.|.-|--
T Consensus       148 ~~~d~Y~~sKa~aE~~Vl~an~--~~~l~T~aLR~~~IYGpgd  188 (361)
T KOG1430|consen  148 KHIDPYGESKALAEKLVLEANG--SDDLYTCALRPPGIYGPGD  188 (361)
T ss_pred             ccccccchHHHHHHHHHHHhcC--CCCeeEEEEccccccCCCC
Confidence             235899999988888876554  2267888888877766543

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.37  E-value=3.9e-12  Score=101.49  Aligned_cols=169  Identities=18%  Similarity=0.114  Sum_probs=132.7

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHH----hcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLK----ARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      +|++||||=||--|..+++.|+++|+.|.-+.|+....+...-.+.    ....++....+|++|..++.++++++    
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v----   77 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV----   77 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc----
Confidence            5999999999999999999999999999988887543332211222    22345788999999999999998877    


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCc-----------CCCCC
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY-----------QPQSS  156 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~-----------~~~~~  156 (226)
                       .+|-+.|-|+....     ..|.+.-+.+.+++..|+.+++.++.-+-.++.++...||+.-+           .|..+
T Consensus        78 -~PdEIYNLaAQS~V-----~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~TPFyP  151 (345)
T COG1089          78 -QPDEIYNLAAQSHV-----GVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKETTPFYP  151 (345)
T ss_pred             -Cchhheeccccccc-----cccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccCCCCCC
Confidence             89999999987643     24455557888999999999999987765556788888887543           34567


Q ss_pred             CchhhHhHHHHHHHHHHHHHHhC---C-CeEEEEEecC
Q 027248          157 MAMYGVTKTALLGLTKALAAEMA---P-DTRVNCVAPG  190 (226)
Q Consensus       157 ~~~Y~~sKaa~~~~~~~la~e~~---~-~i~v~~v~Pg  190 (226)
                      .++|+++|....-++..++..|.   . ||-+|.=+|.
T Consensus       152 rSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~  189 (345)
T COG1089         152 RSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPL  189 (345)
T ss_pred             CCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCC
Confidence            88999999998888888888874   3 7888887775

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.34  E-value=8.3e-11  Score=97.82  Aligned_cols=170  Identities=20%  Similarity=0.156  Sum_probs=118.2

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCC-CeEEEEecCcc---hHHHHHHHHH-------hcCCcEEEEEeeCCCHHH-HHHHH
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEG-ASVVVSSRKQK---NVDEAVVKLK-------ARGIEVIGVVCHVSNGQQ-RKNLI   80 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g-~~v~~~~r~~~---~~~~~~~~~~-------~~~~~~~~~~~Dv~~~~~-v~~~~   80 (226)
                      +++++|||||.+|..+..+|+.+- ++|++..|-++   ..+++.+.+.       ....++.++..|++.+.- ++.  
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~--   78 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSE--   78 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCH--
Confidence            579999999999999999888764 68999888665   2333333333       224578899999985431 000  


Q ss_pred             HHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCC-------
Q 027248           81 NQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP-------  153 (226)
Q Consensus        81 ~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~-------  153 (226)
                      .+..+--+.+|.+|||++......+        ..+.-..|+.|+..+++.+...  |...+.++||.+....       
T Consensus        79 ~~~~~La~~vD~I~H~gA~Vn~v~p--------Ys~L~~~NVlGT~evlrLa~~g--k~Kp~~yVSsisv~~~~~~~~~~  148 (382)
T COG3320          79 RTWQELAENVDLIIHNAALVNHVFP--------YSELRGANVLGTAEVLRLAATG--KPKPLHYVSSISVGETEYYSNFT  148 (382)
T ss_pred             HHHHHHhhhcceEEecchhhcccCc--------HHHhcCcchHhHHHHHHHHhcC--CCceeEEEeeeeeccccccCCCc
Confidence            0111112389999999997653322        2555678999999999888764  2336999999875411       


Q ss_pred             -------------CCCCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCcc
Q 027248          154 -------------QSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFA  197 (226)
Q Consensus       154 -------------~~~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~  197 (226)
                                   ....+.|+.||.+.+.+++.....   |+++..+.||+|--+..
T Consensus       149 ~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~r---GLpv~I~Rpg~I~gds~  202 (382)
T COG3320         149 VDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAGDR---GLPVTIFRPGYITGDSR  202 (382)
T ss_pred             cccccccccccccCccCCCcchhHHHHHHHHHHHhhc---CCCeEEEecCeeeccCc
Confidence                         123468999999999988764433   88999999999976654

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.34  E-value=1.2e-10  Score=104.20  Aligned_cols=127  Identities=16%  Similarity=0.146  Sum_probs=89.7

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCC---eEEEEecCcchH--H-HHHHHHH---------hc---------CCcE
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGA---SVVVSSRKQKNV--D-EAVVKLK---------AR---------GIEV   63 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~---~v~~~~r~~~~~--~-~~~~~~~---------~~---------~~~~   63 (226)
                      ..++||+++||||||.||..++++|++.+.   +|+++.|.....  . ...+++.         +.         ..++
T Consensus       115 ~f~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki  194 (605)
T PLN02503        115 EFLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKL  194 (605)
T ss_pred             hhhcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccE
Confidence            347899999999999999999999998753   578888865422  1 2211221         11         2368


Q ss_pred             EEEEeeCCCHH------HHHHHHHHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 027248           64 IGVVCHVSNGQ------QRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ  137 (226)
Q Consensus        64 ~~~~~Dv~~~~------~v~~~~~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~  137 (226)
                      .++..|++++.      ..+.+.       ..+|++||+|+....        .++.+..+++|+.|+.++++.+...- 
T Consensus       195 ~~v~GDl~d~~LGLs~~~~~~L~-------~~vDiVIH~AA~v~f--------~~~~~~a~~vNV~GT~nLLelA~~~~-  258 (605)
T PLN02503        195 VPVVGNVCESNLGLEPDLADEIA-------KEVDVIINSAANTTF--------DERYDVAIDINTRGPCHLMSFAKKCK-  258 (605)
T ss_pred             EEEEeeCCCcccCCCHHHHHHHH-------hcCCEEEECcccccc--------ccCHHHHHHHHHHHHHHHHHHHHHcC-
Confidence            88999999973      222222       269999999997541        13457788999999999999886531 


Q ss_pred             cCCEEEEEeccCC
Q 027248          138 KGSSVVLISSIAG  150 (226)
Q Consensus       138 ~~~~iv~~sS~~~  150 (226)
                      +-.++|++||...
T Consensus       259 ~lk~fV~vSTayV  271 (605)
T PLN02503        259 KLKLFLQVSTAYV  271 (605)
T ss_pred             CCCeEEEccCcee
Confidence            1237889888754

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.32  E-value=4.8e-12  Score=100.75  Aligned_cols=109  Identities=17%  Similarity=0.181  Sum_probs=82.0

Q ss_pred             CEEEEEcC-CCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCC
Q 027248           13 KVAIVTAS-TQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (226)
Q Consensus        13 k~vlItGa-~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id   91 (226)
                      .+=.||.. +||||+++++.|+++|++|+++++...        +....    ...+|+++.++++++++.+.+.++++|
T Consensus        15 ~VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~--------l~~~~----~~~~Dv~d~~s~~~l~~~v~~~~g~iD   82 (227)
T TIGR02114        15 SVRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA--------LKPEP----HPNLSIREIETTKDLLITLKELVQEHD   82 (227)
T ss_pred             CceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh--------ccccc----CCcceeecHHHHHHHHHHHHHHcCCCC
Confidence            34456665 689999999999999999999876311        11000    235799999999999999999999999


Q ss_pred             EEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 027248           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ  137 (226)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~  137 (226)
                      +||||||+.. ..++.+.+.++|++++.+   +.|.+.+-.-..++
T Consensus        83 iLVnnAgv~d-~~~~~~~s~e~~~~~~~~---~~~~~~~~~~~Ki~  124 (227)
T TIGR02114        83 ILIHSMAVSD-YTPVYMTDLEQVQASDNL---NEFLSKQNHEAKIS  124 (227)
T ss_pred             EEEECCEecc-ccchhhCCHHHHhhhcch---hhhhccccccCCcc
Confidence            9999999865 577888999999988554   45555543333343

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.26  E-value=3.5e-10  Score=111.25  Aligned_cols=168  Identities=20%  Similarity=0.147  Sum_probs=114.9

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCC----CeEEEEecCcchHHH---HHHHHHhc-------CCcEEEEEeeCCCHHH--
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEG----ASVVVSSRKQKNVDE---AVVKLKAR-------GIEVIGVVCHVSNGQQ--   75 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g----~~v~~~~r~~~~~~~---~~~~~~~~-------~~~~~~~~~Dv~~~~~--   75 (226)
                      .++|+|||++|.||..++++|++++    .+|+...|+....+.   ..+.+...       ..++.++.+|++++.-  
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence            5789999999999999999999887    779999997654322   21111111       1267888999986521  


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCC--
Q 027248           76 RKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP--  153 (226)
Q Consensus        76 v~~~~~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~--  153 (226)
                      -....+++   ...+|++||+|+.....     .+   +......|+.|+.++++.+...  +..+++++||.+....  
T Consensus      1051 ~~~~~~~l---~~~~d~iiH~Aa~~~~~-----~~---~~~~~~~nv~gt~~ll~~a~~~--~~~~~v~vSS~~v~~~~~ 1117 (1389)
T TIGR03443      1051 SDEKWSDL---TNEVDVIIHNGALVHWV-----YP---YSKLRDANVIGTINVLNLCAEG--KAKQFSFVSSTSALDTEY 1117 (1389)
T ss_pred             CHHHHHHH---HhcCCEEEECCcEecCc-----cC---HHHHHHhHHHHHHHHHHHHHhC--CCceEEEEeCeeecCccc
Confidence            01112222   23799999999975411     12   2344567999999999988643  2348999999754311  


Q ss_pred             --------------------------CCCCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCC
Q 027248          154 --------------------------QSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTH  195 (226)
Q Consensus       154 --------------------------~~~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~  195 (226)
                                                ......|+.||.+.+.+++.+..   .|+.+..+.||.|..+
T Consensus      1118 ~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~---~g~~~~i~Rpg~v~G~ 1182 (1389)
T TIGR03443      1118 YVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK---RGLRGCIVRPGYVTGD 1182 (1389)
T ss_pred             ccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh---CCCCEEEECCCccccC
Confidence                                      00124599999999998876543   2889999999988655

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.23  E-value=4.2e-10  Score=103.13  Aligned_cols=140  Identities=14%  Similarity=0.043  Sum_probs=97.5

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCE
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~   92 (226)
                      .+++||||+|.||+++++.|.++|++|..                        ...|++|.+.+..++++.     ++|+
T Consensus       381 mkiLVtGa~G~iG~~l~~~L~~~g~~v~~------------------------~~~~l~d~~~v~~~i~~~-----~pd~  431 (668)
T PLN02260        381 LKFLIYGRTGWIGGLLGKLCEKQGIAYEY------------------------GKGRLEDRSSLLADIRNV-----KPTH  431 (668)
T ss_pred             ceEEEECCCchHHHHHHHHHHhCCCeEEe------------------------eccccccHHHHHHHHHhh-----CCCE
Confidence            46999999999999999999999987631                        113678888777666543     7999


Q ss_pred             EEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcC-----------C-------C
Q 027248           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ-----------P-------Q  154 (226)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~-----------~-------~  154 (226)
                      |||+|+.... .. .+...++-.+.+++|+.++.++++++...   +.+.+++||...+.           +       .
T Consensus       432 Vih~Aa~~~~-~~-~~~~~~~~~~~~~~N~~gt~~l~~a~~~~---g~~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~  506 (668)
T PLN02260        432 VFNAAGVTGR-PN-VDWCESHKVETIRANVVGTLTLADVCREN---GLLMMNFATGCIFEYDAKHPEGSGIGFKEEDKPN  506 (668)
T ss_pred             EEECCcccCC-CC-CChHHhCHHHHHHHHhHHHHHHHHHHHHc---CCeEEEEcccceecCCcccccccCCCCCcCCCCC
Confidence            9999997531 11 12223445788899999999999999764   23456666643211           1       1


Q ss_pred             CCCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEe
Q 027248          155 SSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVA  188 (226)
Q Consensus       155 ~~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~  188 (226)
                      +....|+.||.+.+.+++.+...+  .+++..+.
T Consensus       507 ~~~~~Yg~sK~~~E~~~~~~~~~~--~~r~~~~~  538 (668)
T PLN02260        507 FTGSFYSKTKAMVEELLREYDNVC--TLRVRMPI  538 (668)
T ss_pred             CCCChhhHHHHHHHHHHHhhhhhe--EEEEEEec
Confidence            234689999999999998763211  45554444

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.21  E-value=3.4e-10  Score=93.02  Aligned_cols=156  Identities=17%  Similarity=0.125  Sum_probs=94.4

Q ss_pred             EEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCEEE
Q 027248           15 AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVV   94 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~li   94 (226)
                      ++||||+|.||.+++++|+++|++|++++|+.+..+....        ..  ..|+.. .       ...+.+..+|+||
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--------~~--~~~~~~-~-------~~~~~~~~~D~Vv   62 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKW--------EG--YKPWAP-L-------AESEALEGADAVI   62 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccc--------ee--eecccc-c-------chhhhcCCCCEEE
Confidence            5899999999999999999999999999998876432110        00  112222 1       1122345899999


Q ss_pred             EcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCC-----------CCCCchhhHh
Q 027248           95 SNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP-----------QSSMAMYGVT  163 (226)
Q Consensus        95 ~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~-----------~~~~~~Y~~s  163 (226)
                      |+||......   ..+.+.....+++|+.++.++++++...-.+...+++.||...+..           ..+...|+..
T Consensus        63 h~a~~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~~~~~~  139 (292)
T TIGR01777        63 NLAGEPIADK---RWTEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEEDSPAGDDFLAEL  139 (292)
T ss_pred             ECCCCCcccc---cCCHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCcccCCCCCChHHHH
Confidence            9999643111   2233455678899999999999888754211124444554321110           0112223333


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCceeCC
Q 027248          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTH  195 (226)
Q Consensus       164 Kaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~  195 (226)
                      +...+...+    .+.. ++.+..+.|+.+..+
T Consensus       140 ~~~~e~~~~----~~~~~~~~~~ilR~~~v~G~  168 (292)
T TIGR01777       140 CRDWEEAAQ----AAEDLGTRVVLLRTGIVLGP  168 (292)
T ss_pred             HHHHHHHhh----hchhcCCceEEEeeeeEECC
Confidence            333333322    2223 789999999998765

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.20  E-value=2.2e-10  Score=87.79  Aligned_cols=150  Identities=17%  Similarity=0.154  Sum_probs=103.9

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCEE
Q 027248           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVV   93 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~l   93 (226)
                      +++||||+ |+|.++++.|+++|++|++++|++++.+.....+.. ..++.++.+|++|+++++.+++.+.+.++.+|++
T Consensus         2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~-~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~l   79 (177)
T PRK08309          2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT-PESITPLPLDYHDDDALKLAIKSTIEKNGPFDLA   79 (177)
T ss_pred             EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc-CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEE
Confidence            58999998 788889999999999999999998776665554532 4467888999999999999999999988999999


Q ss_pred             EEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhh--cCCEEEEEeccCCcCCCCCCchhhHhHHHHHHHH
Q 027248           94 VSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLT  171 (226)
Q Consensus        94 i~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~--~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~  171 (226)
                      |+..-...                       +-.+..++...-.  +.-+++.+-.+.+..+                  
T Consensus        80 v~~vh~~~-----------------------~~~~~~~~~~~gv~~~~~~~~h~~gs~~~~~------------------  118 (177)
T PRK08309         80 VAWIHSSA-----------------------KDALSVVCRELDGSSETYRLFHVLGSAASDP------------------  118 (177)
T ss_pred             EEeccccc-----------------------hhhHHHHHHHHccCCCCceEEEEeCCcCCch------------------
Confidence            97765432                       1222333332211  1236777664443211                  


Q ss_pred             HHHHHHhCC-CeEEEEEecCceeCCcccccccCchh
Q 027248          172 KALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGV  206 (226)
Q Consensus       172 ~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~  206 (226)
                      +..+..... .....-|..|++.++-...|+.+++.
T Consensus       119 ~~~~~~~~~~~~~~~~i~lgf~~~~~~~rwlt~~ei  154 (177)
T PRK08309        119 RIPSEKIGPARCSYRRVILGFVLEDTYSRWLTHEEI  154 (177)
T ss_pred             hhhhhhhhhcCCceEEEEEeEEEeCCccccCchHHH
Confidence            122222333 55677788999988876666666553

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.12  E-value=1.5e-09  Score=89.28  Aligned_cols=141  Identities=16%  Similarity=0.110  Sum_probs=90.8

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC-CCE
Q 027248           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK-IDV   92 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~-id~   92 (226)
                      +++||||||.+|+.++++|+++|++|.++.|++++...         ..+..+.+|+.|++++..+++.. +.... +|.
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~~---------~~~~~~~~d~~d~~~l~~a~~~~-~~~~g~~d~   70 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSAG---------PNEKHVKFDWLDEDTWDNPFSSD-DGMEPEISA   70 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccccC---------CCCccccccCCCHHHHHHHHhcc-cCcCCceeE
Confidence            38999999999999999999999999999999875321         23445678999999998887542 22235 899


Q ss_pred             EEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHhHHHHHHHHH
Q 027248           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTK  172 (226)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~  172 (226)
                      ++++++...  .        ..+.        ...+..++...  .-.+||++||.....+.       .++...+.+.+
T Consensus        71 v~~~~~~~~--~--------~~~~--------~~~~i~aa~~~--gv~~~V~~Ss~~~~~~~-------~~~~~~~~~l~  123 (285)
T TIGR03649        71 VYLVAPPIP--D--------LAPP--------MIKFIDFARSK--GVRRFVLLSASIIEKGG-------PAMGQVHAHLD  123 (285)
T ss_pred             EEEeCCCCC--C--------hhHH--------HHHHHHHHHHc--CCCEEEEeeccccCCCC-------chHHHHHHHHH
Confidence            998876421  0        0011        11233333322  12489999986543221       12333333322


Q ss_pred             HHHHHhCCCeEEEEEecCceeCCc
Q 027248          173 ALAAEMAPDTRVNCVAPGFVPTHF  196 (226)
Q Consensus       173 ~la~e~~~~i~v~~v~Pg~v~t~~  196 (226)
                      .     ..++....+.|+++..++
T Consensus       124 ~-----~~gi~~tilRp~~f~~~~  142 (285)
T TIGR03649       124 S-----LGGVEYTVLRPTWFMENF  142 (285)
T ss_pred             h-----ccCCCEEEEeccHHhhhh
Confidence            2     137888999999776544

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=99.11  E-value=1.4e-09  Score=86.98  Aligned_cols=150  Identities=19%  Similarity=0.130  Sum_probs=110.0

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      ...+++|+||||+|.||.+++..|..+|+.|++++.-..........+.. ...+..+..|+..+     ++.       
T Consensus        24 p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~-~~~fel~~hdv~~p-----l~~-------   90 (350)
T KOG1429|consen   24 PSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIG-HPNFELIRHDVVEP-----LLK-------   90 (350)
T ss_pred             CCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhcc-CcceeEEEeechhH-----HHH-------
Confidence            35678999999999999999999999999999999987765554444432 23455566676554     333       


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCc----------------C
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY----------------Q  152 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~----------------~  152 (226)
                      .+|.++|-|+..++..- . .   .-..++.+|..++.+....+...   +.|++..|+...+                .
T Consensus        91 evD~IyhLAapasp~~y-~-~---npvktIktN~igtln~lglakrv---~aR~l~aSTseVYgdp~~hpq~e~ywg~vn  162 (350)
T KOG1429|consen   91 EVDQIYHLAAPASPPHY-K-Y---NPVKTIKTNVIGTLNMLGLAKRV---GARFLLASTSEVYGDPLVHPQVETYWGNVN  162 (350)
T ss_pred             HhhhhhhhccCCCCccc-c-c---CccceeeecchhhHHHHHHHHHh---CceEEEeecccccCCcccCCCccccccccC
Confidence            67888888887653111 1 1   11567889999999998888665   3588888887654                2


Q ss_pred             CCCCCchhhHhHHHHHHHHHHHHHHhC
Q 027248          153 PQSSMAMYGVTKTALLGLTKALAAEMA  179 (226)
Q Consensus       153 ~~~~~~~Y~~sKaa~~~~~~~la~e~~  179 (226)
                      +....+.|.-.|-..+.|+..+.++.+
T Consensus       163 pigpr~cydegKr~aE~L~~~y~k~~g  189 (350)
T KOG1429|consen  163 PIGPRSCYDEGKRVAETLCYAYHKQEG  189 (350)
T ss_pred             cCCchhhhhHHHHHHHHHHHHhhcccC
Confidence            334577899999999999988887753

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.05  E-value=2.2e-09  Score=85.86  Aligned_cols=158  Identities=15%  Similarity=0.048  Sum_probs=110.9

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCC--CeEEEEecCc-chHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEG--ASVVVSSRKQ-KNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g--~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      ++-|.++||||.|.||...+..+...=  ++.+.++-=. -.-....++. ...++..++..|+.+...+..++.     
T Consensus         4 ~~~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~-~n~p~ykfv~~di~~~~~~~~~~~-----   77 (331)
T KOG0747|consen    4 YKEKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPV-RNSPNYKFVEGDIADADLVLYLFE-----   77 (331)
T ss_pred             CccceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhh-ccCCCceEeeccccchHHHHhhhc-----
Confidence            445899999999999999999998863  4444333211 0001222222 224567889999999998777665     


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcC------------CC
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ------------PQ  154 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~------------~~  154 (226)
                      .+.+|.|+|-|+.....     .+.-+--+.+..|++++..+.....-.. +-.++|++|+...+.            ..
T Consensus        78 ~~~id~vihfaa~t~vd-----~s~~~~~~~~~nnil~t~~Lle~~~~sg-~i~~fvhvSTdeVYGds~~~~~~~E~s~~  151 (331)
T KOG0747|consen   78 TEEIDTVIHFAAQTHVD-----RSFGDSFEFTKNNILSTHVLLEAVRVSG-NIRRFVHVSTDEVYGDSDEDAVVGEASLL  151 (331)
T ss_pred             cCchhhhhhhHhhhhhh-----hhcCchHHHhcCCchhhhhHHHHHHhcc-CeeEEEEecccceecCccccccccccccC
Confidence            25899999999875421     1112224556889999999999887654 223799999987541            12


Q ss_pred             CCCchhhHhHHHHHHHHHHHHHHhC
Q 027248          155 SSMAMYGVTKTALLGLTKALAAEMA  179 (226)
Q Consensus       155 ~~~~~Y~~sKaa~~~~~~~la~e~~  179 (226)
                      .+...|++||+|.+++.+++...|+
T Consensus       152 nPtnpyAasKaAaE~~v~Sy~~sy~  176 (331)
T KOG0747|consen  152 NPTNPYAASKAAAEMLVRSYGRSYG  176 (331)
T ss_pred             CCCCchHHHHHHHHHHHHHHhhccC
Confidence            3566799999999999999999984

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.01  E-value=3.4e-09  Score=92.80  Aligned_cols=129  Identities=16%  Similarity=0.118  Sum_probs=92.6

Q ss_pred             CCEEE----EEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248           12 GKVAI----VTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus        12 gk~vl----ItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      |..++    |+||++|+|.++++.|...|++|+.+.+.+.+...                                 ...
T Consensus        34 ~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~---------------------------------~~~   80 (450)
T PRK08261         34 GQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAA---------------------------------GWG   80 (450)
T ss_pred             CCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCcccccccc---------------------------------CcC
Confidence            44555    88899999999999999999999988776541100                                 001


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHhHHHH
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~  167 (226)
                      .+++.++.-+-..        .+.++        +.+.+.+++..++.|.++++||+++|.....   ....|+++|+++
T Consensus        81 ~~~~~~~~d~~~~--------~~~~~--------l~~~~~~~~~~l~~l~~~griv~i~s~~~~~---~~~~~~~akaal  141 (450)
T PRK08261         81 DRFGALVFDATGI--------TDPAD--------LKALYEFFHPVLRSLAPCGRVVVLGRPPEAA---ADPAAAAAQRAL  141 (450)
T ss_pred             CcccEEEEECCCC--------CCHHH--------HHHHHHHHHHHHHhccCCCEEEEEccccccC---CchHHHHHHHHH
Confidence            2455444322211        11222        2344567888888888889999999987653   345699999999


Q ss_pred             HHHHHHHHHHhCCCeEEEEEecCce
Q 027248          168 LGLTKALAAEMAPDTRVNCVAPGFV  192 (226)
Q Consensus       168 ~~~~~~la~e~~~~i~v~~v~Pg~v  192 (226)
                      .+++|+++.|+..+|+++.+.|+..
T Consensus       142 ~gl~rsla~E~~~gi~v~~i~~~~~  166 (450)
T PRK08261        142 EGFTRSLGKELRRGATAQLVYVAPG  166 (450)
T ss_pred             HHHHHHHHHHhhcCCEEEEEecCCC
Confidence            9999999999944999999999873

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=99.00  E-value=2.6e-09  Score=98.82  Aligned_cols=168  Identities=18%  Similarity=0.223  Sum_probs=139.0

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCe-EEEEecCcch--HH-HHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQKN--VD-EAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~-v~~~~r~~~~--~~-~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      -|..+|+||-||.|+++++.|..+|++ +++++|+--+  -+ .....+.+.|.++.+-.-|++..+..+.++++-.+ .
T Consensus      1768 eksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~k-l 1846 (2376)
T KOG1202|consen 1768 EKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESNK-L 1846 (2376)
T ss_pred             cceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhhh-c
Confidence            488999999999999999999999987 8999998433  22 34567788888888888899999998888886543 5


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHhHHHH
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~  167 (226)
                      +.+-.++|-|.+.+ .+.+++.+.+.|+.+-+-.+.|++++-+........=..+|.+||.++-.+..+.+-|+-+..++
T Consensus      1847 ~~vGGiFnLA~VLR-D~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvscGRGN~GQtNYG~aNS~M 1925 (2376)
T KOG1202|consen 1847 GPVGGIFNLAAVLR-DGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSSVSCGRGNAGQTNYGLANSAM 1925 (2376)
T ss_pred             ccccchhhHHHHHH-hhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEeecccCCCCcccccchhhHHH
Confidence            78889999999887 68899999999999999999999998777655443334789999999888999999999999999


Q ss_pred             HHHHHHHHHHhCCC
Q 027248          168 LGLTKALAAEMAPD  181 (226)
Q Consensus       168 ~~~~~~la~e~~~~  181 (226)
                      +.+++.-..+--||
T Consensus      1926 ERiceqRr~~GfPG 1939 (2376)
T KOG1202|consen 1926 ERICEQRRHEGFPG 1939 (2376)
T ss_pred             HHHHHHhhhcCCCc
Confidence            99998655553334

>PLN00016 RNA-binding protein; Provisional

Probab=98.96  E-value=1.9e-08  Score=86.23  Aligned_cols=145  Identities=15%  Similarity=0.122  Sum_probs=93.0

Q ss_pred             CCEEEEE----cCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHH-------HHHHhcCCcEEEEEeeCCCHHHHHHHH
Q 027248           12 GKVAIVT----ASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAV-------VKLKARGIEVIGVVCHVSNGQQRKNLI   80 (226)
Q Consensus        12 gk~vlIt----Ga~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~Dv~~~~~v~~~~   80 (226)
                      .++|+||    ||+|.||..++++|+++|++|++++|+........       .++..  ..+.++.+|+++   ++.++
T Consensus        52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~--~~v~~v~~D~~d---~~~~~  126 (378)
T PLN00016         52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSS--AGVKTVWGDPAD---VKSKV  126 (378)
T ss_pred             cceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhh--cCceEEEecHHH---HHhhh
Confidence            4789999    99999999999999999999999999876532211       12222  236678888866   22222


Q ss_pred             HHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCC----
Q 027248           81 NQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSS----  156 (226)
Q Consensus        81 ~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~----  156 (226)
                      .     ...+|+|||+++..                     ..++..+++++...  .-.++|++||...+.....    
T Consensus       127 ~-----~~~~d~Vi~~~~~~---------------------~~~~~~ll~aa~~~--gvkr~V~~SS~~vyg~~~~~p~~  178 (378)
T PLN00016        127 A-----GAGFDVVYDNNGKD---------------------LDEVEPVADWAKSP--GLKQFLFCSSAGVYKKSDEPPHV  178 (378)
T ss_pred             c-----cCCccEEEeCCCCC---------------------HHHHHHHHHHHHHc--CCCEEEEEccHhhcCCCCCCCCC
Confidence            1     23799999987631                     11223344444321  1248999999865432111    


Q ss_pred             ----CchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCc
Q 027248          157 ----MAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHF  196 (226)
Q Consensus       157 ----~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~  196 (226)
                          ...+. +|...+.+.+    +  .++.+..+.|+.+..+.
T Consensus       179 E~~~~~p~~-sK~~~E~~l~----~--~~l~~~ilRp~~vyG~~  215 (378)
T PLN00016        179 EGDAVKPKA-GHLEVEAYLQ----K--LGVNWTSFRPQYIYGPG  215 (378)
T ss_pred             CCCcCCCcc-hHHHHHHHHH----H--cCCCeEEEeceeEECCC
Confidence                11122 7888777653    2  27888999999887664

>PRK12320 hypothetical protein; Provisional

Probab=98.96  E-value=1e-08  Score=93.18  Aligned_cols=103  Identities=19%  Similarity=0.230  Sum_probs=78.2

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCEE
Q 027248           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVV   93 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~l   93 (226)
                      +|+||||+|.||.+++++|.++|++|++++|+....         ....+.++.+|++++. +.+++       ..+|++
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~---------~~~~ve~v~~Dl~d~~-l~~al-------~~~D~V   64 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA---------LDPRVDYVCASLRNPV-LQELA-------GEADAV   64 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc---------ccCCceEEEccCCCHH-HHHHh-------cCCCEE
Confidence            499999999999999999999999999999865321         1235678899999873 33332       278999


Q ss_pred             EEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccC
Q 027248           94 VSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (226)
Q Consensus        94 i~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~  149 (226)
                      ||.|+... ..            ...+|+.++.++++++...   +.++|++||..
T Consensus        65 IHLAa~~~-~~------------~~~vNv~Gt~nLleAA~~~---GvRiV~~SS~~  104 (699)
T PRK12320         65 IHLAPVDT-SA------------PGGVGITGLAHVANAAARA---GARLLFVSQAA  104 (699)
T ss_pred             EEcCccCc-cc------------hhhHHHHHHHHHHHHHHHc---CCeEEEEECCC
Confidence            99998632 10            1147999999999988653   34799999874

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.95  E-value=5.6e-09  Score=86.22  Aligned_cols=84  Identities=21%  Similarity=0.295  Sum_probs=67.2

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCe-EEEEecCc---chHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHH
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQ---KNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTI   84 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~-v~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (226)
                      ++++|+++|+|+ ||+|++++..|++.|++ |.+++|+.   ++.++..+++...+..+.+..+|+++.++++..++   
T Consensus       123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~---  198 (289)
T PRK12548        123 DVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIA---  198 (289)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhc---
Confidence            467899999999 69999999999999986 99999997   67777777776655555666788887776655443   


Q ss_pred             HHhCCCCEEEEcCCCC
Q 027248           85 EKFGKIDVVVSNAAAN  100 (226)
Q Consensus        85 ~~~~~id~li~nag~~  100 (226)
                          ..|+||||..+.
T Consensus       199 ----~~DilINaTp~G  210 (289)
T PRK12548        199 ----SSDILVNATLVG  210 (289)
T ss_pred             ----cCCEEEEeCCCC
Confidence                569999988654

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.93  E-value=5.3e-09  Score=89.67  Aligned_cols=80  Identities=20%  Similarity=0.262  Sum_probs=62.8

Q ss_pred             cccCCCEEEEEcC----------------CCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCC
Q 027248            8 KRFQGKVAIVTAS----------------TQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS   71 (226)
Q Consensus         8 ~~~~gk~vlItGa----------------~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~   71 (226)
                      .+++||+++||||                +|++|++++++|.++|++|++++++.+ ++       .. .  .+..+|++
T Consensus       184 ~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~-------~~-~--~~~~~dv~  252 (399)
T PRK05579        184 KDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP-------TP-A--GVKRIDVE  252 (399)
T ss_pred             cccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc-------CC-C--CcEEEccC
Confidence            3578999999999                555999999999999999999998763 11       00 1  13457999


Q ss_pred             CHHHHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 027248           72 NGQQRKNLINQTIEKFGKIDVVVSNAAANP  101 (226)
Q Consensus        72 ~~~~v~~~~~~~~~~~~~id~li~nag~~~  101 (226)
                      +.+++.+.+.   +.++.+|++|||||+..
T Consensus       253 ~~~~~~~~v~---~~~~~~DilI~~Aav~d  279 (399)
T PRK05579        253 SAQEMLDAVL---AALPQADIFIMAAAVAD  279 (399)
T ss_pred             CHHHHHHHHH---HhcCCCCEEEEcccccc
Confidence            9888766655   55789999999999864

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.83  E-value=4.8e-08  Score=76.01  Aligned_cols=84  Identities=32%  Similarity=0.322  Sum_probs=67.1

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      .++++++++|+||+|++|+++++.|++.|++|++++|+.++++...+++.+.. ......+|..+.+++.+.+.      
T Consensus        24 ~~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~------   96 (194)
T cd01078          24 KDLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARF-GEGVGAVETSDDAARAAAIK------   96 (194)
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhc-CCcEEEeeCCCHHHHHHHHh------
Confidence            46889999999999999999999999999999999999988888777765322 23345678888887766554      


Q ss_pred             CCCCEEEEcCCC
Q 027248           88 GKIDVVVSNAAA   99 (226)
Q Consensus        88 ~~id~li~nag~   99 (226)
                       ..|++|++...
T Consensus        97 -~~diVi~at~~  107 (194)
T cd01078          97 -GADVVFAAGAA  107 (194)
T ss_pred             -cCCEEEECCCC
Confidence             77888876553

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=98.81  E-value=5.8e-08  Score=77.76  Aligned_cols=155  Identities=19%  Similarity=0.206  Sum_probs=90.9

Q ss_pred             EEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCEEE
Q 027248           15 AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVV   94 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~li   94 (226)
                      |+||||||-||++++..|.+.|++|+++.|++.+.+.....             .+...+.+.+..+      ..+|++|
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~~-------------~v~~~~~~~~~~~------~~~DavI   61 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLHP-------------NVTLWEGLADALT------LGIDAVI   61 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcCc-------------cccccchhhhccc------CCCCEEE
Confidence            58999999999999999999999999999998765432210             1111122111111      1799999


Q ss_pred             EcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhh---cCCEEEEEeccCCcCCCCCCchhhHh----HHHH
Q 027248           95 SNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ---KGSSVVLISSIAGYQPQSSMAMYGVT----KTAL  167 (226)
Q Consensus        95 ~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~---~~~~iv~~sS~~~~~~~~~~~~Y~~s----Kaa~  167 (226)
                      |-||-.-..+...   .+.=++.+    .+.+..++.+.....   ++.++..-+|..++.+......|.-.    .-.+
T Consensus        62 NLAG~~I~~rrWt---~~~K~~i~----~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fl  134 (297)
T COG1090          62 NLAGEPIAERRWT---EKQKEEIR----QSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFL  134 (297)
T ss_pred             ECCCCccccccCC---HHHHHHHH----HHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCChH
Confidence            9999653222121   12222332    344455555555543   23445555555566554444333222    2234


Q ss_pred             HHHHHHHHHHh---CC-CeEEEEEecCceeCC
Q 027248          168 LGLTKALAAEM---AP-DTRVNCVAPGFVPTH  195 (226)
Q Consensus       168 ~~~~~~la~e~---~~-~i~v~~v~Pg~v~t~  195 (226)
                      ..+++.|-.|.   .. |+||..+.-|.|-.+
T Consensus       135 a~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~  166 (297)
T COG1090         135 AQLCQDWEEEALQAQQLGTRVVLLRTGVVLSP  166 (297)
T ss_pred             HHHHHHHHHHHhhhhhcCceEEEEEEEEEecC
Confidence            45555555543   23 899999999988764

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=98.80  E-value=7.3e-07  Score=71.17  Aligned_cols=145  Identities=18%  Similarity=0.145  Sum_probs=91.4

Q ss_pred             EEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCEEE
Q 027248           15 AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVV   94 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~li   94 (226)
                      |+|+||+|.+|+.+++.|++.+++|.++.|+..+  ...+++...+.  .++.+|+.+++++.++++       .+|.++
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~--~~~~~l~~~g~--~vv~~d~~~~~~l~~al~-------g~d~v~   69 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSS--DRAQQLQALGA--EVVEADYDDPESLVAALK-------GVDAVF   69 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHH--HHHHHHHHTTT--EEEES-TT-HHHHHHHHT-------TCSEEE
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccch--hhhhhhhcccc--eEeecccCCHHHHHHHHc-------CCceEE
Confidence            6899999999999999999999999999999832  34445555554  456999999999887776       999999


Q ss_pred             EcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCC----CCchhhHhHHHHHHH
Q 027248           95 SNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQS----SMAMYGVTKTALLGL  170 (226)
Q Consensus        95 ~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~----~~~~Y~~sKaa~~~~  170 (226)
                      ++.+....      .   +        ......+++++...--  .++|+ ||........    +....-..|..++.+
T Consensus        70 ~~~~~~~~------~---~--------~~~~~~li~Aa~~agV--k~~v~-ss~~~~~~~~~~~~p~~~~~~~k~~ie~~  129 (233)
T PF05368_consen   70 SVTPPSHP------S---E--------LEQQKNLIDAAKAAGV--KHFVP-SSFGADYDESSGSEPEIPHFDQKAEIEEY  129 (233)
T ss_dssp             EESSCSCC------C---H--------HHHHHHHHHHHHHHT---SEEEE-SEESSGTTTTTTSTTHHHHHHHHHHHHHH
T ss_pred             eecCcchh------h---h--------hhhhhhHHHhhhcccc--ceEEE-EEecccccccccccccchhhhhhhhhhhh
Confidence            88875420      1   1        1112334455544322  26774 5554433211    112222456666554


Q ss_pred             HHHHHHHhCCCeEEEEEecCceeCCc
Q 027248          171 TKALAAEMAPDTRVNCVAPGFVPTHF  196 (226)
Q Consensus       171 ~~~la~e~~~~i~v~~v~Pg~v~t~~  196 (226)
                      .+..      ++..+.+.||+....+
T Consensus       130 l~~~------~i~~t~i~~g~f~e~~  149 (233)
T PF05368_consen  130 LRES------GIPYTIIRPGFFMENL  149 (233)
T ss_dssp             HHHC------TSEBEEEEE-EEHHHH
T ss_pred             hhhc------cccceeccccchhhhh
Confidence            4432      7888899999765443

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=98.79  E-value=1.3e-07  Score=81.66  Aligned_cols=179  Identities=19%  Similarity=0.185  Sum_probs=114.3

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCC---CeEEEEecCcch--HHHHHH---------HHHhc----CCcEEEEEee
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEG---ASVVVSSRKQKN--VDEAVV---------KLKAR----GIEVIGVVCH   69 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g---~~v~~~~r~~~~--~~~~~~---------~~~~~----~~~~~~~~~D   69 (226)
                      ..++||+++||||||.+|+.+..+|++.-   -++.+.-|.+..  .++...         .+.+.    -.++..+.+|
T Consensus         8 ~f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GD   87 (467)
T KOG1221|consen    8 QFYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGD   87 (467)
T ss_pred             HHhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccc
Confidence            45899999999999999999999998753   357777776432  222221         12222    2357788889


Q ss_pred             CCCHHHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccC
Q 027248           70 VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (226)
Q Consensus        70 v~~~~~v~~~~~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~  149 (226)
                      +++++---+--+. ......+|++||.|+....        .|-++..+.+|..|+.++.+.+.... +-...+.+|+..
T Consensus        88 i~~~~LGis~~D~-~~l~~eV~ivih~AAtvrF--------de~l~~al~iNt~Gt~~~l~lak~~~-~l~~~vhVSTAy  157 (467)
T KOG1221|consen   88 ISEPDLGISESDL-RTLADEVNIVIHSAATVRF--------DEPLDVALGINTRGTRNVLQLAKEMV-KLKALVHVSTAY  157 (467)
T ss_pred             ccCcccCCChHHH-HHHHhcCCEEEEeeeeecc--------chhhhhhhhhhhHhHHHHHHHHHHhh-hhheEEEeehhh
Confidence            8876531111111 1222489999999998652        35568889999999999998887653 223688888776


Q ss_pred             CcC----------CC------------------------------CCCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEec
Q 027248          150 GYQ----------PQ------------------------------SSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAP  189 (226)
Q Consensus       150 ~~~----------~~------------------------------~~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~P  189 (226)
                      +..          +.                              .....|.-+||-.+++...-    +.+..+..+.|
T Consensus       158 ~n~~~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~----~~~lPivIiRP  233 (467)
T KOG1221|consen  158 SNCNVGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKE----AENLPLVIIRP  233 (467)
T ss_pred             eecccccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhh----ccCCCeEEEcC
Confidence            530          00                              11224666666555544432    23667888888


Q ss_pred             CceeCCccccc
Q 027248          190 GFVPTHFAEYI  200 (226)
Q Consensus       190 g~v~t~~~~~~  200 (226)
                      +.|-..+.+..
T Consensus       234 siI~st~~EP~  244 (467)
T KOG1221|consen  234 SIITSTYKEPF  244 (467)
T ss_pred             CceeccccCCC
Confidence            87776544443

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.72  E-value=9.2e-08  Score=76.31  Aligned_cols=100  Identities=16%  Similarity=0.091  Sum_probs=67.9

Q ss_pred             CEEEEEcCCC-chhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCC
Q 027248           13 KVAIVTASTQ-GIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (226)
Q Consensus        13 k~vlItGa~~-giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id   91 (226)
                      .+=.||+.++ ++|++++++|+++|++|++++|+.....     .  ....+.++.+  ..   .+.+.+.+.+.++.+|
T Consensus        16 ~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~-----~--~~~~v~~i~v--~s---~~~m~~~l~~~~~~~D   83 (229)
T PRK06732         16 SVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKP-----E--PHPNLSIIEI--EN---VDDLLETLEPLVKDHD   83 (229)
T ss_pred             CceeecCccchHHHHHHHHHHHhCCCEEEEEECcccccC-----C--CCCCeEEEEE--ec---HHHHHHHHHHHhcCCC
Confidence            3556777665 4999999999999999999987642110     0  0123444443  22   3333444444556899


Q ss_pred             EEEEcCCCCCCCCccccccHHHHHHHHHHHHHHH
Q 027248           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSS  125 (226)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~  125 (226)
                      ++|||||+.. ..+....+.++|.+++++|....
T Consensus        84 ivIh~AAvsd-~~~~~~~~~~~~~~~~~v~~~~~  116 (229)
T PRK06732         84 VLIHSMAVSD-YTPVYMTDLEEVSASDNLNEFLT  116 (229)
T ss_pred             EEEeCCccCC-ceehhhhhhhhhhhhhhhhhhhc
Confidence            9999999875 45666778899999999886544

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=98.70  E-value=2.8e-07  Score=74.19  Aligned_cols=144  Identities=15%  Similarity=0.101  Sum_probs=103.4

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      .++.|-++-|.||||.+|+.++.+|++.|-.|++-.|-.+.--...+- ...-+++.++..|+.|+++++++++      
T Consensus        57 sS~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkv-mGdLGQvl~~~fd~~DedSIr~vvk------  129 (391)
T KOG2865|consen   57 SSVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKV-MGDLGQVLFMKFDLRDEDSIRAVVK------  129 (391)
T ss_pred             ccccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheee-cccccceeeeccCCCCHHHHHHHHH------
Confidence            467788999999999999999999999999999999866542222221 2223578899999999999999988      


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHhHHHH
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~  167 (226)
                       .-+++||--|--.+.+.   .+.+      ++|..++-.+++.+..---  -++|.+|+..+.  ....+-|--||++.
T Consensus       130 -~sNVVINLIGrd~eTkn---f~f~------Dvn~~~aerlAricke~GV--erfIhvS~Lgan--v~s~Sr~LrsK~~g  195 (391)
T KOG2865|consen  130 -HSNVVINLIGRDYETKN---FSFE------DVNVHIAERLARICKEAGV--ERFIHVSCLGAN--VKSPSRMLRSKAAG  195 (391)
T ss_pred             -hCcEEEEeeccccccCC---cccc------cccchHHHHHHHHHHhhCh--hheeehhhcccc--ccChHHHHHhhhhh
Confidence             67899999986543332   2222      4677777777666644322  279999988754  34455667777766


Q ss_pred             HHHHH
Q 027248          168 LGLTK  172 (226)
Q Consensus       168 ~~~~~  172 (226)
                      +--.+
T Consensus       196 E~aVr  200 (391)
T KOG2865|consen  196 EEAVR  200 (391)
T ss_pred             HHHHH
Confidence            65443

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.69  E-value=1e-07  Score=81.56  Aligned_cols=111  Identities=16%  Similarity=0.185  Sum_probs=74.6

Q ss_pred             ccCCCEEEEEcC---------------CCc-hhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCC
Q 027248            9 RFQGKVAIVTAS---------------TQG-IGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN   72 (226)
Q Consensus         9 ~~~gk~vlItGa---------------~~g-iG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~   72 (226)
                      +++||+++||||               |+| +|.+++++|.++|++|+++.+.....         ...  ....+|+++
T Consensus       182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~---------~~~--~~~~~~v~~  250 (390)
T TIGR00521       182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL---------TPP--GVKSIKVST  250 (390)
T ss_pred             ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC---------CCC--CcEEEEecc
Confidence            588999999999               556 99999999999999999988765321         111  124579999


Q ss_pred             HHHH-HHHHHHHHHHhCCCCEEEEcCCCCCCCCcccccc--HHHHHHHHHHHHHHHHHHHHHHhh
Q 027248           73 GQQR-KNLINQTIEKFGKIDVVVSNAAANPSVDSILQTK--ESVLDKLWDINVKSSILLLQDAAP  134 (226)
Q Consensus        73 ~~~v-~~~~~~~~~~~~~id~li~nag~~~~~~~~~~~~--~~~~~~~~~~N~~~~~~~~~~~~~  134 (226)
                      .+++ +.++++.   ++.+|++|+|||+.. ..+....+  .....+.+.+|+.-.--+++.+..
T Consensus       251 ~~~~~~~~~~~~---~~~~D~~i~~Aavsd-~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~  311 (390)
T TIGR00521       251 AEEMLEAALNEL---AKDFDIFISAAAVAD-FKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRK  311 (390)
T ss_pred             HHHHHHHHHHhh---cccCCEEEEcccccc-ccccccccccccccCCceeEEEEeCcHHHHHHHh
Confidence            9888 5555443   468999999999875 23321111  111122345666666666655554

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=98.65  E-value=2.9e-06  Score=74.75  Aligned_cols=183  Identities=20%  Similarity=0.189  Sum_probs=121.3

Q ss_pred             ccccCCCEEEEEcCC-CchhHHHHHHHHhCCCeEEEEecCc-chHHHHHHHHHhc----CCcEEEEEeeCCCHHHHHHHH
Q 027248            7 AKRFQGKVAIVTAST-QGIGFGIAERLGLEGASVVVSSRKQ-KNVDEAVVKLKAR----GIEVIGVVCHVSNGQQRKNLI   80 (226)
Q Consensus         7 ~~~~~gk~vlItGa~-~giG~a~~~~l~~~g~~v~~~~r~~-~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~   80 (226)
                      ...+.+|++|||||+ +.||-+++..|++.|+.|+++..+- +...+..+.+...    +....++..+..+..+|+.++
T Consensus       391 ~~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlI  470 (866)
T COG4982         391 GGTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALI  470 (866)
T ss_pred             CCCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHH
Confidence            456789999999998 8899999999999999988876653 3444555555443    556788899999999999999


Q ss_pred             HHHHHHhC--------------CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcC-----CE
Q 027248           81 NQTIEKFG--------------KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKG-----SS  141 (226)
Q Consensus        81 ~~~~~~~~--------------~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~-----~~  141 (226)
                      +.+-...-              .+|.++--|+... .+.+.+..... +..|++-+.....++-.+.+.-...     -+
T Consensus       471 ewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v-~G~l~~agsra-E~~~rilLw~V~Rliggl~~~~s~r~v~~R~h  548 (866)
T COG4982         471 EWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRV-SGELADAGSRA-EFAMRILLWNVLRLIGGLKKQGSSRGVDTRLH  548 (866)
T ss_pred             HHhccccccccCCcceecccccCcceeeecccCCc-cCccccCCchH-HHHHHHHHHHHHHHHHHhhhhccccCcccceE
Confidence            98864321              4778887777654 34555554322 2333444444444444443332111     24


Q ss_pred             EEEEecc-CCcCCCCCCchhhHhHHHHHHHHHHHHHHh--CCCeEEEEEecCcee
Q 027248          142 VVLISSI-AGYQPQSSMAMYGVTKTALLGLTKALAAEM--APDTRVNCVAPGFVP  193 (226)
Q Consensus       142 iv~~sS~-~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~~i~v~~v~Pg~v~  193 (226)
                      +|.-.|. .+.  ..+.+.|+-||++++.+.--|..|-  +..+.+..-.-||++
T Consensus       549 VVLPgSPNrG~--FGgDGaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWtr  601 (866)
T COG4982         549 VVLPGSPNRGM--FGGDGAYGESKLALDAVVNRWHSESSWAARVSLAHALIGWTR  601 (866)
T ss_pred             EEecCCCCCCc--cCCCcchhhHHHHHHHHHHHhhccchhhHHHHHhhhheeeec
Confidence            5544443 222  3467899999999999998777774  224555556667775

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.60  E-value=2.4e-06  Score=69.46  Aligned_cols=134  Identities=14%  Similarity=0.067  Sum_probs=94.7

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCEE
Q 027248           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVV   93 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~l   93 (226)
                      .++||||||.+|.+++++|.++|++|.+..|++++.....       ..+.+...|+.+.+++...++       .+|.+
T Consensus         2 ~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~-------~~v~~~~~d~~~~~~l~~a~~-------G~~~~   67 (275)
T COG0702           2 KILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA-------GGVEVVLGDLRDPKSLVAGAK-------GVDGV   67 (275)
T ss_pred             eEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc-------CCcEEEEeccCCHhHHHHHhc-------cccEE
Confidence            5899999999999999999999999999999998776654       467788899999999877766       88888


Q ss_pred             EEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHhHHHHHHHHHH
Q 027248           94 VSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKA  173 (226)
Q Consensus        94 i~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~  173 (226)
                      ++..+... ...          ..............+...   ....+++.+|+..+..  .....|..+|...+...+.
T Consensus        68 ~~i~~~~~-~~~----------~~~~~~~~~~~~~a~~a~---~~~~~~~~~s~~~~~~--~~~~~~~~~~~~~e~~l~~  131 (275)
T COG0702          68 LLISGLLD-GSD----------AFRAVQVTAVVRAAEAAG---AGVKHGVSLSVLGADA--ASPSALARAKAAVEAALRS  131 (275)
T ss_pred             EEEecccc-ccc----------chhHHHHHHHHHHHHHhc---CCceEEEEeccCCCCC--CCccHHHHHHHHHHHHHHh
Confidence            87777542 111          011122333344444443   1223677777776542  3566899999988887775


Q ss_pred             HHHH
Q 027248          174 LAAE  177 (226)
Q Consensus       174 la~e  177 (226)
                      ....
T Consensus       132 sg~~  135 (275)
T COG0702         132 SGIP  135 (275)
T ss_pred             cCCC
Confidence            4433

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=98.58  E-value=8.6e-07  Score=75.52  Aligned_cols=169  Identities=16%  Similarity=0.151  Sum_probs=102.1

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHH-HHHHHHHHHHHhC-
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQ-RKNLINQTIEKFG-   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-v~~~~~~~~~~~~-   88 (226)
                      +..+|+|+||+|++|+-+++.|.++|+.|..+.|+.++...... +...-.....+..|.....+ ...+++    ... 
T Consensus        78 ~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~-~~~~d~~~~~v~~~~~~~~d~~~~~~~----~~~~  152 (411)
T KOG1203|consen   78 KPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG-VFFVDLGLQNVEADVVTAIDILKKLVE----AVPK  152 (411)
T ss_pred             CCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc-ccccccccceeeeccccccchhhhhhh----hccc
Confidence            45789999999999999999999999999999999988776655 11111112233344444433 233332    221 


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHhHHHHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALL  168 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~  168 (226)
                      ...+++.++|.-..   .+     |...-+.+.+.|..++.+++..--.+  +++.+||..+....+....+..  .+.-
T Consensus       153 ~~~~v~~~~ggrp~---~e-----d~~~p~~VD~~g~knlvdA~~~aGvk--~~vlv~si~~~~~~~~~~~~~~--~~~~  220 (411)
T KOG1203|consen  153 GVVIVIKGAGGRPE---EE-----DIVTPEKVDYEGTKNLVDACKKAGVK--RVVLVGSIGGTKFNQPPNILLL--NGLV  220 (411)
T ss_pred             cceeEEecccCCCC---cc-----cCCCcceecHHHHHHHHHHHHHhCCc--eEEEEEeecCcccCCCchhhhh--hhhh
Confidence            24455555554321   11     33444567788899999998543333  8999999987655444333332  1111


Q ss_pred             HHH-HHHHHHhCC-CeEEEEEecCceeCCc
Q 027248          169 GLT-KALAAEMAP-DTRVNCVAPGFVPTHF  196 (226)
Q Consensus       169 ~~~-~~la~e~~~-~i~v~~v~Pg~v~t~~  196 (226)
                      .-. +.....+.. |+.-..|.||..+.+.
T Consensus       221 ~~~k~~~e~~~~~Sgl~ytiIR~g~~~~~~  250 (411)
T KOG1203|consen  221 LKAKLKAEKFLQDSGLPYTIIRPGGLEQDT  250 (411)
T ss_pred             hHHHHhHHHHHHhcCCCcEEEeccccccCC
Confidence            111 122222334 8888899998776643

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=98.50  E-value=1.7e-06  Score=67.51  Aligned_cols=136  Identities=21%  Similarity=0.119  Sum_probs=89.9

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCC---eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGA---SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~---~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      ++|+|||++|-+|.|+.+.+..+|.   +.++.+..                     .+|+++.++.+.++++.     +
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~sk---------------------d~DLt~~a~t~~lF~~e-----k   55 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGSK---------------------DADLTNLADTRALFESE-----K   55 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEeccc---------------------cccccchHHHHHHHhcc-----C
Confidence            6799999999999999999999886   24554442                     25999999999999864     8


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCc----------------CC
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY----------------QP  153 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~----------------~~  153 (226)
                      +.++||.|+-.+..-.-.....+-    +..|+.-.-++++.+..+-.+  ++++..|..-+                .+
T Consensus        56 PthVIhlAAmVGGlf~N~~ynldF----~r~Nl~indNVlhsa~e~gv~--K~vsclStCIfPdkt~yPIdEtmvh~gpp  129 (315)
T KOG1431|consen   56 PTHVIHLAAMVGGLFHNNTYNLDF----IRKNLQINDNVLHSAHEHGVK--KVVSCLSTCIFPDKTSYPIDETMVHNGPP  129 (315)
T ss_pred             CceeeehHhhhcchhhcCCCchHH----HhhcceechhHHHHHHHhchh--hhhhhcceeecCCCCCCCCCHHHhccCCC
Confidence            889999987553211111222333    334444444556666555332  45555554322                12


Q ss_pred             CCCCchhhHhHHHHHHHHHHHHHHhCC
Q 027248          154 QSSMAMYGVTKTALLGLTKALAAEMAP  180 (226)
Q Consensus       154 ~~~~~~Y~~sKaa~~~~~~~la~e~~~  180 (226)
                      .|..-.|+-+|.-+.-..+.++.+++.
T Consensus       130 hpsN~gYsyAKr~idv~n~aY~~qhg~  156 (315)
T KOG1431|consen  130 HPSNFGYSYAKRMIDVQNQAYRQQHGR  156 (315)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhCC
Confidence            344567999997777777999988753

>PLN00106 malate dehydrogenase

Probab=98.41  E-value=4.4e-06  Score=69.91  Aligned_cols=149  Identities=16%  Similarity=0.143  Sum_probs=98.0

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCC--eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      ..++|+|||++|.+|..++..|+..+.  +++++++++  .+...-++.......  ...++++.++....+       .
T Consensus        17 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~--~~g~a~Dl~~~~~~~--~i~~~~~~~d~~~~l-------~   85 (323)
T PLN00106         17 PGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN--TPGVAADVSHINTPA--QVRGFLGDDQLGDAL-------K   85 (323)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC--CCeeEchhhhCCcCc--eEEEEeCCCCHHHHc-------C
Confidence            457899999999999999999997763  699999987  222122333222222  222443333333333       4


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCc-------------CCCC
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY-------------QPQS  155 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~-------------~~~~  155 (226)
                      ..|++|+.||....  +     ...+.+.+..|+.....+.+.+..+-  ...+++++|.-.-             .+.|
T Consensus        86 ~aDiVVitAG~~~~--~-----g~~R~dll~~N~~i~~~i~~~i~~~~--p~aivivvSNPvD~~~~i~t~~~~~~s~~p  156 (323)
T PLN00106         86 GADLVIIPAGVPRK--P-----GMTRDDLFNINAGIVKTLCEAVAKHC--PNALVNIISNPVNSTVPIAAEVLKKAGVYD  156 (323)
T ss_pred             CCCEEEEeCCCCCC--C-----CCCHHHHHHHHHHHHHHHHHHHHHHC--CCeEEEEeCCCccccHHHHHHHHHHcCCCC
Confidence            89999999998542  1     13457778889888777777776653  2256665555442             3356


Q ss_pred             CCchhhHhHHHHHHHHHHHHHHhC
Q 027248          156 SMAMYGVTKTALLGLTKALAAEMA  179 (226)
Q Consensus       156 ~~~~Y~~sKaa~~~~~~~la~e~~  179 (226)
                      ....|+.++.-...|-..++.++.
T Consensus       157 ~~~viG~~~LDs~Rl~~~lA~~lg  180 (323)
T PLN00106        157 PKKLFGVTTLDVVRANTFVAEKKG  180 (323)
T ss_pred             cceEEEEecchHHHHHHHHHHHhC
Confidence            677899998777778888888875

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.39  E-value=1.6e-06  Score=63.43  Aligned_cols=77  Identities=16%  Similarity=0.364  Sum_probs=59.3

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCe-EEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      +++||+++|.|+ ||.|++++..|.+.|++ |.++.|+.++.+.+.+++.  +..+.++  ++.+..   ..+       
T Consensus         9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~--~~~~~~~--~~~~~~---~~~-------   73 (135)
T PF01488_consen    9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFG--GVNIEAI--PLEDLE---EAL-------   73 (135)
T ss_dssp             TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHT--GCSEEEE--EGGGHC---HHH-------
T ss_pred             CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcC--cccccee--eHHHHH---HHH-------
Confidence            789999999997 89999999999999987 9999999999999888882  2234333  443332   222       


Q ss_pred             CCCCEEEEcCCCC
Q 027248           88 GKIDVVVSNAAAN  100 (226)
Q Consensus        88 ~~id~li~nag~~  100 (226)
                      ...|++|++.+..
T Consensus        74 ~~~DivI~aT~~~   86 (135)
T PF01488_consen   74 QEADIVINATPSG   86 (135)
T ss_dssp             HTESEEEE-SSTT
T ss_pred             hhCCeEEEecCCC
Confidence            3899999998764

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.37  E-value=2e-06  Score=73.06  Aligned_cols=77  Identities=18%  Similarity=0.282  Sum_probs=65.7

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCC-CeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCC
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEG-ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id   91 (226)
                      +.++|.|+ |++|+.++..|+++| .+|.+.+|+.++.+++.....   .++...++|+.+.+.+.++++       ..|
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~---~~v~~~~vD~~d~~al~~li~-------~~d   70 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIG---GKVEALQVDAADVDALVALIK-------DFD   70 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhcc---ccceeEEecccChHHHHHHHh-------cCC
Confidence            45899998 999999999999999 889999999988877765543   378899999999999888877       459


Q ss_pred             EEEEcCCCC
Q 027248           92 VVVSNAAAN  100 (226)
Q Consensus        92 ~li~nag~~  100 (226)
                      ++||++...
T Consensus        71 ~VIn~~p~~   79 (389)
T COG1748          71 LVINAAPPF   79 (389)
T ss_pred             EEEEeCCch
Confidence            999988764

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.34  E-value=2.2e-06  Score=73.66  Aligned_cols=76  Identities=26%  Similarity=0.327  Sum_probs=60.2

Q ss_pred             EEEEcCCCchhHHHHHHHHhCC-C-eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCE
Q 027248           15 AIVTASTQGIGFGIAERLGLEG-A-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g-~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~   92 (226)
                      |+|.|+ |.+|+.+++.|++.+ . +|++.+|+.+++++..+++  .+.++...++|+.|.++++++++       ..|+
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~l~~~~~-------~~dv   70 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL--LGDRVEAVQVDVNDPESLAELLR-------GCDV   70 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT----TTTTEEEEE--TTTHHHHHHHHT-------TSSE
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc--cccceeEEEEecCCHHHHHHHHh-------cCCE
Confidence            689999 999999999999987 4 7999999999988887765  45678999999999999888776       6699


Q ss_pred             EEEcCCCC
Q 027248           93 VVSNAAAN  100 (226)
Q Consensus        93 li~nag~~  100 (226)
                      +||++|..
T Consensus        71 Vin~~gp~   78 (386)
T PF03435_consen   71 VINCAGPF   78 (386)
T ss_dssp             EEE-SSGG
T ss_pred             EEECCccc
Confidence            99999864

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.28  E-value=4e-06  Score=73.48  Aligned_cols=78  Identities=24%  Similarity=0.354  Sum_probs=59.2

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCc-chHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ-KNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      ++++|+++|+|+++ +|.++++.|+++|++|.+.+++. +.++...+++.+.+  +.++..|..+            +..
T Consensus         2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~--~~~~~~~~~~------------~~~   66 (450)
T PRK14106          2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELG--IELVLGEYPE------------EFL   66 (450)
T ss_pred             CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC--CEEEeCCcch------------hHh
Confidence            46789999999888 99999999999999999999975 44444455554433  4466677765            123


Q ss_pred             CCCCEEEEcCCCCC
Q 027248           88 GKIDVVVSNAAANP  101 (226)
Q Consensus        88 ~~id~li~nag~~~  101 (226)
                      +.+|+||+++|...
T Consensus        67 ~~~d~vv~~~g~~~   80 (450)
T PRK14106         67 EGVDLVVVSPGVPL   80 (450)
T ss_pred             hcCCEEEECCCCCC
Confidence            57999999999753

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=98.28  E-value=1.6e-06  Score=68.51  Aligned_cols=168  Identities=20%  Similarity=0.130  Sum_probs=115.4

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHH-HHHHHh-----cCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEA-VVKLKA-----RGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~-~~~~~~-----~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      |++||||=+|-=|..+++-|+++|++|.-+-|+....+.. ++.+..     .+........|++|...+.+++..+   
T Consensus        29 kvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i---  105 (376)
T KOG1372|consen   29 KVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI---  105 (376)
T ss_pred             eEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc---
Confidence            5999999999999999999999999998777766554433 333322     2445667778999999988888866   


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhh-hhcCCEEEEEeccCCc-----------CCC
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPH-LQKGSSVVLISSIAGY-----------QPQ  154 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~-l~~~~~iv~~sS~~~~-----------~~~  154 (226)
                        +++-+.|.|+... .+    .+.+--+.+-++...|++.++.++... |.++-++--.|+..-+           .|.
T Consensus       106 --kPtEiYnLaAQSH-Vk----vSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQsE~TPF  178 (376)
T KOG1372|consen  106 --KPTEVYNLAAQSH-VK----VSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQSETTPF  178 (376)
T ss_pred             --Cchhhhhhhhhcc-eE----EEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCcccCCCC
Confidence              7778888887654 12    233333566678889999999888765 3333344444443221           344


Q ss_pred             CCCchhhHhHHHHHHHHHHHHHHh---CC-CeEEEEEecC
Q 027248          155 SSMAMYGVTKTALLGLTKALAAEM---AP-DTRVNCVAPG  190 (226)
Q Consensus       155 ~~~~~Y~~sKaa~~~~~~~la~e~---~~-~i~v~~v~Pg  190 (226)
                      .+.++|+++|....=++-.++..|   +. ||-+|.=+|-
T Consensus       179 yPRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPR  218 (376)
T KOG1372|consen  179 YPRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPR  218 (376)
T ss_pred             CCCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCc
Confidence            568899999986554444444444   34 7888877774

>PRK09620 hypothetical protein; Provisional

Probab=98.25  E-value=1.8e-06  Score=68.80  Aligned_cols=83  Identities=23%  Similarity=0.257  Sum_probs=51.8

Q ss_pred             cCCCEEEEEcCC----------------CchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCH
Q 027248           10 FQGKVAIVTAST----------------QGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNG   73 (226)
Q Consensus        10 ~~gk~vlItGa~----------------~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   73 (226)
                      ++||+|+||+|.                |.+|.+++++|.++|++|+++++........   . ..+.....+    ...
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~---~-~~~~~~~~V----~s~   72 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPND---I-NNQLELHPF----EGI   72 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcc---c-CCceeEEEE----ecH
Confidence            479999999986                9999999999999999999888643211000   0 001122222    222


Q ss_pred             HHHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 027248           74 QQRKNLINQTIEKFGKIDVVVSNAAANP  101 (226)
Q Consensus        74 ~~v~~~~~~~~~~~~~id~li~nag~~~  101 (226)
                      .++...+.++.+. ..+|++||.|++..
T Consensus        73 ~d~~~~l~~~~~~-~~~D~VIH~AAvsD   99 (229)
T PRK09620         73 IDLQDKMKSIITH-EKVDAVIMAAAGSD   99 (229)
T ss_pred             HHHHHHHHHHhcc-cCCCEEEECccccc
Confidence            2222333333221 26899999999864

>PTZ00325 malate dehydrogenase; Provisional

Probab=98.23  E-value=1.3e-05  Score=67.01  Aligned_cols=147  Identities=18%  Similarity=0.132  Sum_probs=93.2

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCC--CeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEG--ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      .+.++++|+|++|.+|..++..|+.++  .++++++++  ..+...-++......  ....+.+++.+..+.+       
T Consensus         6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~--~~~g~a~Dl~~~~~~--~~v~~~td~~~~~~~l-------   74 (321)
T PTZ00325          6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIV--GAPGVAADLSHIDTP--AKVTGYADGELWEKAL-------   74 (321)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecC--CCcccccchhhcCcC--ceEEEecCCCchHHHh-------
Confidence            345789999999999999999999665  579999993  222222233332222  2234566544332333       


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCc-------------CCC
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY-------------QPQ  154 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~-------------~~~  154 (226)
                      ...|++|+++|....  +     .+++.+.+..|+...-.+.+++..+-  ..++|+++|...-             .+.
T Consensus        75 ~gaDvVVitaG~~~~--~-----~~tR~dll~~N~~i~~~i~~~i~~~~--~~~iviv~SNPvdv~~~~~~~~~~~~sg~  145 (321)
T PTZ00325         75 RGADLVLICAGVPRK--P-----GMTRDDLFNTNAPIVRDLVAAVASSA--PKAIVGIVSNPVNSTVPIAAETLKKAGVY  145 (321)
T ss_pred             CCCCEEEECCCCCCC--C-----CCCHHHHHHHHHHHHHHHHHHHHHHC--CCeEEEEecCcHHHHHHHHHhhhhhccCC
Confidence            389999999997541  1     12457778889888888877777652  2378888877531             234


Q ss_pred             CCCchhhHhHHHHHH--HHHHHHHHh
Q 027248          155 SSMAMYGVTKTALLG--LTKALAAEM  178 (226)
Q Consensus       155 ~~~~~Y~~sKaa~~~--~~~~la~e~  178 (226)
                      |....|+.+ . |+.  |-..++..+
T Consensus       146 p~~~viG~g-~-LDs~R~r~~la~~l  169 (321)
T PTZ00325        146 DPRKLFGVT-T-LDVVRARKFVAEAL  169 (321)
T ss_pred             Chhheeech-h-HHHHHHHHHHHHHh
Confidence            556677776 2 443  334455554

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.21  E-value=7.3e-06  Score=68.78  Aligned_cols=74  Identities=22%  Similarity=0.300  Sum_probs=55.9

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhC-C-CeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLE-G-ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~-g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      .++++|+++||||+|.||..++++|+++ | .++++++|+.+++.....++..         .|+.   .++       +
T Consensus       151 ~~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~---------~~i~---~l~-------~  211 (340)
T PRK14982        151 IDLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGG---------GKIL---SLE-------E  211 (340)
T ss_pred             cCcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhcc---------ccHH---hHH-------H
Confidence            4689999999999999999999999864 5 5799999998877776655421         1222   121       2


Q ss_pred             HhCCCCEEEEcCCCC
Q 027248           86 KFGKIDVVVSNAAAN  100 (226)
Q Consensus        86 ~~~~id~li~nag~~  100 (226)
                      .+...|++|+.++..
T Consensus       212 ~l~~aDiVv~~ts~~  226 (340)
T PRK14982        212 ALPEADIVVWVASMP  226 (340)
T ss_pred             HHccCCEEEECCcCC
Confidence            345799999999874

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.19  E-value=6.8e-06  Score=68.12  Aligned_cols=80  Identities=18%  Similarity=0.230  Sum_probs=70.2

Q ss_pred             EEEEcCCCchhHHHHHHHHh----CCCeEEEEecCcchHHHHHHHHHhcCC----cEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248           15 AIVTASTQGIGFGIAERLGL----EGASVVVSSRKQKNVDEAVVKLKARGI----EVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~----~g~~v~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      ++|.||||.-|.-+++++.+    .|.++.+.+||++++++..+++.+..+    ...++.||.+|++++.+++.     
T Consensus         8 vVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak-----   82 (423)
T KOG2733|consen    8 VVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAK-----   82 (423)
T ss_pred             EEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHh-----
Confidence            89999999999999999999    788899999999999999999887752    34488999999999999888     


Q ss_pred             hCCCCEEEEcCCCCC
Q 027248           87 FGKIDVVVSNAAANP  101 (226)
Q Consensus        87 ~~~id~li~nag~~~  101 (226)
                        +-.+++|++|-..
T Consensus        83 --~~~vivN~vGPyR   95 (423)
T KOG2733|consen   83 --QARVIVNCVGPYR   95 (423)
T ss_pred             --hhEEEEeccccce
Confidence              4458999999765

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=98.12  E-value=0.00013  Score=55.46  Aligned_cols=147  Identities=13%  Similarity=0.059  Sum_probs=96.7

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCEE
Q 027248           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVV   93 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~l   93 (226)
                      .+.|+||||-.|..+.++..++|++|+.+.|++.++...        ..+.+.+.|+.+++++.+.+.       ..|++
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~--------~~~~i~q~Difd~~~~a~~l~-------g~DaV   66 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR--------QGVTILQKDIFDLTSLASDLA-------GHDAV   66 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc--------ccceeecccccChhhhHhhhc-------CCceE
Confidence            378899999999999999999999999999999876443        235678999999999866655       89999


Q ss_pred             EEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCC----------CCchhh
Q 027248           94 VSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQS----------SMAMYG  161 (226)
Q Consensus        94 i~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~----------~~~~Y~  161 (226)
                      |..-|.... ..      +  ...    ..    ..+.+...++.  ..|++.++...+..-.+          +-..|.
T Consensus        67 IsA~~~~~~-~~------~--~~~----~k----~~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~ey~~  129 (211)
T COG2910          67 ISAFGAGAS-DN------D--ELH----SK----SIEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYKP  129 (211)
T ss_pred             EEeccCCCC-Ch------h--HHH----HH----HHHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCCCCchhHHH
Confidence            988776531 11      1  000    01    13334444433  24888888776653222          223455


Q ss_pred             HhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCC
Q 027248          162 VTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTH  195 (226)
Q Consensus       162 ~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~  195 (226)
                      .+++..+. .+.|..|-  .+.-.-|+|...-.|
T Consensus       130 ~A~~~ae~-L~~Lr~~~--~l~WTfvSPaa~f~P  160 (211)
T COG2910         130 EALAQAEF-LDSLRAEK--SLDWTFVSPAAFFEP  160 (211)
T ss_pred             HHHHHHHH-HHHHhhcc--CcceEEeCcHHhcCC
Confidence            55554443 34455553  467777788755544

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=98.10  E-value=4.7e-05  Score=62.94  Aligned_cols=137  Identities=18%  Similarity=0.231  Sum_probs=84.9

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      .|++++|+|+++++|.++++.+...|.+|+.+++++++.+.+. ++   +.+.   .+|..+.+..+.+.+...  .+.+
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~---g~~~---~~~~~~~~~~~~~~~~~~--~~~~  214 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVR-QA---GADA---VFNYRAEDLADRILAATA--GQGV  214 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-Hc---CCCE---EEeCCCcCHHHHHHHHcC--CCce
Confidence            5899999999999999999999999999999999886655442 22   3221   235555544444332221  1369


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCC------------cCCCCCCc
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG------------YQPQSSMA  158 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~------------~~~~~~~~  158 (226)
                      |++++++|...            .+..               ...+...|+++.+++...            ....++..
T Consensus       215 d~vi~~~~~~~------------~~~~---------------~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (325)
T cd08253         215 DVIIEVLANVN------------LAKD---------------LDVLAPGGRIVVYGSGGLRGTIPINPLMAKEASIRGVL  267 (325)
T ss_pred             EEEEECCchHH------------HHHH---------------HHhhCCCCEEEEEeecCCcCCCChhHHHhcCceEEeee
Confidence            99999887311            0111               123445788888876321            01112233


Q ss_pred             hhhHhHHHHHHHHHHHHHHhCC-CeE
Q 027248          159 MYGVTKTALLGLTKALAAEMAP-DTR  183 (226)
Q Consensus       159 ~Y~~sKaa~~~~~~~la~e~~~-~i~  183 (226)
                      .|..+|..+..+.+.+...+.. .++
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~i~  293 (325)
T cd08253         268 LYTATPEERAAAAEAIAAGLADGALR  293 (325)
T ss_pred             hhhcCHHHHHHHHHHHHHHHHCCCcc
Confidence            5667777777777776666544 444

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=98.04  E-value=1.6e-05  Score=66.79  Aligned_cols=117  Identities=15%  Similarity=0.151  Sum_probs=66.9

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCC-------CeEEEEecCcch--HHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHH
Q 027248           14 VAIVTASTQGIGFGIAERLGLEG-------ASVVVSSRKQKN--VDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTI   84 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g-------~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (226)
                      +++||||+|.+|..++..|+..+       .+|+++++++..  ++...-++....   .....|++...+       +.
T Consensus         4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~---~~~~~~~~~~~~-------~~   73 (325)
T cd01336           4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCA---FPLLKSVVATTD-------PE   73 (325)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhcc---ccccCCceecCC-------HH
Confidence            58999999999999999999854       489999996532  222111111000   011113222222       22


Q ss_pred             HHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEec
Q 027248           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISS  147 (226)
Q Consensus        85 ~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS  147 (226)
                      +.+...|++|+.||....  +  ..+.   .+.++.|+.-.-.+.+.+..+-..++.++.+|.
T Consensus        74 ~~l~~aDiVI~tAG~~~~--~--~~~R---~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsN  129 (325)
T cd01336          74 EAFKDVDVAILVGAMPRK--E--GMER---KDLLKANVKIFKEQGEALDKYAKKNVKVLVVGN  129 (325)
T ss_pred             HHhCCCCEEEEeCCcCCC--C--CCCH---HHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecC
Confidence            233489999999998642  1  1222   556677865444444444443223456777664

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.97  E-value=9.1e-05  Score=62.31  Aligned_cols=101  Identities=21%  Similarity=0.380  Sum_probs=69.4

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC--C
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG--K   89 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~--~   89 (226)
                      |+++||+||+||+|...++-....|+.++++..++++.+ ...++   +.+..+   |..+.+    +.+++.+..+  .
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~l---GAd~vi---~y~~~~----~~~~v~~~t~g~g  211 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKEL---GADHVI---NYREED----FVEQVRELTGGKG  211 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhc---CCCEEE---cCCccc----HHHHHHHHcCCCC
Confidence            899999999999999999988899988777777776655 43333   443332   344433    5555555443  5


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCC
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG  150 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~  150 (226)
                      +|+++...|...                           ....+..++++|+++.+...++
T Consensus       212 vDvv~D~vG~~~---------------------------~~~~l~~l~~~G~lv~ig~~~g  245 (326)
T COG0604         212 VDVVLDTVGGDT---------------------------FAASLAALAPGGRLVSIGALSG  245 (326)
T ss_pred             ceEEEECCCHHH---------------------------HHHHHHHhccCCEEEEEecCCC
Confidence            999999888521                           1123344556789999888774

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=97.96  E-value=0.00017  Score=54.45  Aligned_cols=161  Identities=19%  Similarity=0.062  Sum_probs=96.1

Q ss_pred             cccccCCCEEEEEcCCCchhHHHHHHHHhCC-C-eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHH
Q 027248            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEG-A-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQT   83 (226)
Q Consensus         6 ~~~~~~gk~vlItGa~~giG~a~~~~l~~~g-~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   83 (226)
                      -+..++++.++|.||||-.|..+.+++++.+ + +|+++.|++..-...       +..+.....|....++       .
T Consensus        12 EDf~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at-------~k~v~q~~vDf~Kl~~-------~   77 (238)
T KOG4039|consen   12 EDFRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPAT-------DKVVAQVEVDFSKLSQ-------L   77 (238)
T ss_pred             HHHhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccc-------cceeeeEEechHHHHH-------H
Confidence            3455667889999999999999999999998 3 499999986332221       2234444556655443       2


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHh
Q 027248           84 IEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVT  163 (226)
Q Consensus        84 ~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~s  163 (226)
                      .+..-.+|+++|+-|..+..........-|-+.+        +.+++++...-  ...++.+||..+- + .....|-..
T Consensus        78 a~~~qg~dV~FcaLgTTRgkaGadgfykvDhDyv--------l~~A~~AKe~G--ck~fvLvSS~GAd-~-sSrFlY~k~  145 (238)
T KOG4039|consen   78 ATNEQGPDVLFCALGTTRGKAGADGFYKVDHDYV--------LQLAQAAKEKG--CKTFVLVSSAGAD-P-SSRFLYMKM  145 (238)
T ss_pred             HhhhcCCceEEEeecccccccccCceEeechHHH--------HHHHHHHHhCC--CeEEEEEeccCCC-c-ccceeeeec
Confidence            2333489999999998652111111111011111        22233332211  2379999988754 2 234458778


Q ss_pred             HHHHHHHHHHHHHHhCCCeEEEEEecCceeCCcc
Q 027248          164 KTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFA  197 (226)
Q Consensus       164 Kaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~  197 (226)
                      |.-++.=...|-.+     ++..+.||++.-+-.
T Consensus       146 KGEvE~~v~eL~F~-----~~~i~RPG~ll~~R~  174 (238)
T KOG4039|consen  146 KGEVERDVIELDFK-----HIIILRPGPLLGERT  174 (238)
T ss_pred             cchhhhhhhhcccc-----EEEEecCcceecccc
Confidence            87666544444333     577889998875533

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.95  E-value=0.00019  Score=59.87  Aligned_cols=105  Identities=22%  Similarity=0.350  Sum_probs=71.9

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      .|++++|+|+++++|.++++.+...|++|+++++++++.+.+ .+   .+..   ...|..+.+..+.+.+....  +.+
T Consensus       166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~---~~~~---~~~~~~~~~~~~~~~~~~~~--~~~  236 (342)
T cd08266         166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERA-KE---LGAD---YVIDYRKEDFVREVRELTGK--RGV  236 (342)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HH---cCCC---eEEecCChHHHHHHHHHhCC--CCC
Confidence            578999999999999999999999999999999988765543 22   2222   12366665555554433321  379


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCc
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY  151 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~  151 (226)
                      |++++++|..            .+++.               +..++++|+++++++....
T Consensus       237 d~~i~~~g~~------------~~~~~---------------~~~l~~~G~~v~~~~~~~~  270 (342)
T cd08266         237 DVVVEHVGAA------------TWEKS---------------LKSLARGGRLVTCGATTGY  270 (342)
T ss_pred             cEEEECCcHH------------HHHHH---------------HHHhhcCCEEEEEecCCCC
Confidence            9999998731            12222               2345667899999877553

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.95  E-value=5.4e-05  Score=56.42  Aligned_cols=77  Identities=14%  Similarity=0.281  Sum_probs=57.1

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCC-CeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEG-ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      ++++++++|+|+ |++|+++++.|.+.| .+|.+.+|++++.+...+++....     +..+..+.++.          .
T Consensus        16 ~~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~~~----------~   79 (155)
T cd01065          16 ELKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG-----IAIAYLDLEEL----------L   79 (155)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-----cceeecchhhc----------c
Confidence            467899999998 899999999999996 779999999888877776664321     12233333322          2


Q ss_pred             CCCCEEEEcCCCCC
Q 027248           88 GKIDVVVSNAAANP  101 (226)
Q Consensus        88 ~~id~li~nag~~~  101 (226)
                      ...|++|++.....
T Consensus        80 ~~~Dvvi~~~~~~~   93 (155)
T cd01065          80 AEADLIINTTPVGM   93 (155)
T ss_pred             ccCCEEEeCcCCCC
Confidence            48999999987643

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.89  E-value=5.8e-05  Score=62.07  Aligned_cols=77  Identities=17%  Similarity=0.268  Sum_probs=56.3

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCC-CeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEG-ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      .++++|+++|+|+ ||+|++++..|.+.| .+|.+++|+.++.+.+.+++.... .+.   .++    +.       .+.
T Consensus       119 ~~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~-~~~---~~~----~~-------~~~  182 (278)
T PRK00258        119 VDLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALG-KAE---LDL----EL-------QEE  182 (278)
T ss_pred             CCCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc-cee---ecc----cc-------hhc
Confidence            3578999999997 899999999999999 689999999988888777764321 111   111    00       111


Q ss_pred             hCCCCEEEEcCCCC
Q 027248           87 FGKIDVVVSNAAAN  100 (226)
Q Consensus        87 ~~~id~li~nag~~  100 (226)
                      ....|++||+....
T Consensus       183 ~~~~DivInaTp~g  196 (278)
T PRK00258        183 LADFDLIINATSAG  196 (278)
T ss_pred             cccCCEEEECCcCC
Confidence            24789999988654

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.86  E-value=3.8e-05  Score=67.32  Aligned_cols=78  Identities=23%  Similarity=0.319  Sum_probs=54.5

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      ++||+++|||+++ +|.++++.|++.|++|++.+++........+++.+.+.++  ...+  +...+   ..      ..
T Consensus         3 ~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~--~~~~--~~~~~---~~------~~   68 (447)
T PRK02472          3 YQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKV--ICGS--HPLEL---LD------ED   68 (447)
T ss_pred             cCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEE--EeCC--CCHHH---hc------Cc
Confidence            5789999999986 9999999999999999999987655444445555544332  1111  12211   11      14


Q ss_pred             CCEEEEcCCCCC
Q 027248           90 IDVVVSNAAANP  101 (226)
Q Consensus        90 id~li~nag~~~  101 (226)
                      +|+||+++|+..
T Consensus        69 ~d~vV~s~gi~~   80 (447)
T PRK02472         69 FDLMVKNPGIPY   80 (447)
T ss_pred             CCEEEECCCCCC
Confidence            899999999864

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=97.83  E-value=0.00016  Score=60.83  Aligned_cols=80  Identities=21%  Similarity=0.294  Sum_probs=53.7

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      .|++++|+|++|++|..+++.....|++|+.+++++++.+.+.+.+   +.+. +  .|..+.++..+.+.+..  .+.+
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~l---Ga~~-v--i~~~~~~~~~~~i~~~~--~~gv  222 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKL---GFDD-A--FNYKEEPDLDAALKRYF--PNGI  222 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCce-e--EEcCCcccHHHHHHHhC--CCCc
Confidence            5889999999999999999888889999999998887765554333   3221 1  23332223322222221  1479


Q ss_pred             CEEEEcCC
Q 027248           91 DVVVSNAA   98 (226)
Q Consensus        91 d~li~nag   98 (226)
                      |+++.+.|
T Consensus       223 d~v~d~~g  230 (338)
T cd08295         223 DIYFDNVG  230 (338)
T ss_pred             EEEEECCC
Confidence            99998877

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.83  E-value=0.00048  Score=58.94  Aligned_cols=77  Identities=12%  Similarity=0.142  Sum_probs=54.8

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      +.+++++|.|+ |.+|+..++.+...|++|++++|++++++.....+   +..   +..+..+.+.+.+.+       ..
T Consensus       165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~---g~~---v~~~~~~~~~l~~~l-------~~  230 (370)
T TIGR00518       165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEF---GGR---IHTRYSNAYEIEDAV-------KR  230 (370)
T ss_pred             CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhc---Cce---eEeccCCHHHHHHHH-------cc
Confidence            45678999987 78999999999999999999999987765544433   111   223455555443333       37


Q ss_pred             CCEEEEcCCCC
Q 027248           90 IDVVVSNAAAN  100 (226)
Q Consensus        90 id~li~nag~~  100 (226)
                      .|++|++++..
T Consensus       231 aDvVI~a~~~~  241 (370)
T TIGR00518       231 ADLLIGAVLIP  241 (370)
T ss_pred             CCEEEEccccC
Confidence            89999988663

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.81  E-value=0.00013  Score=59.82  Aligned_cols=75  Identities=15%  Similarity=0.328  Sum_probs=55.9

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      .++|+++|+|+ ||+|++++..|++.|++|.+++|+.++.++..+++...+ .....  +.   ++   .      ....
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~-~~~~~--~~---~~---~------~~~~  178 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYG-EIQAF--SM---DE---L------PLHR  178 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcC-ceEEe--ch---hh---h------cccC
Confidence            46899999998 699999999999999999999999988888777765433 22221  11   11   0      1236


Q ss_pred             CCEEEEcCCCC
Q 027248           90 IDVVVSNAAAN  100 (226)
Q Consensus        90 id~li~nag~~  100 (226)
                      .|++||+.+..
T Consensus       179 ~DivInatp~g  189 (270)
T TIGR00507       179 VDLIINATSAG  189 (270)
T ss_pred             ccEEEECCCCC
Confidence            89999999864

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=97.77  E-value=0.00023  Score=60.40  Aligned_cols=80  Identities=21%  Similarity=0.276  Sum_probs=53.4

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      .|++++|+|++|++|...++.....|++|+.+++++++.+.+.+++   +.+..   .|-.+.+...+.+.+..  .+.+
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~l---Ga~~v---i~~~~~~~~~~~i~~~~--~~gv  229 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFDEA---FNYKEEPDLDAALKRYF--PEGI  229 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhc---CCCEE---EECCCcccHHHHHHHHC--CCCc
Confidence            5889999999999999999888889999999888887655443333   33222   23332222322222221  1369


Q ss_pred             CEEEEcCC
Q 027248           91 DVVVSNAA   98 (226)
Q Consensus        91 d~li~nag   98 (226)
                      |+++.+.|
T Consensus       230 D~v~d~vG  237 (348)
T PLN03154        230 DIYFDNVG  237 (348)
T ss_pred             EEEEECCC
Confidence            99998887

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=97.74  E-value=0.00023  Score=59.56  Aligned_cols=80  Identities=19%  Similarity=0.265  Sum_probs=53.5

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      .|.+++|+|++|++|...++.....|++|+.+++++++.+.+ .++   +.+..   .|..+.+...+.+....  .+.+
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~-~~l---Ga~~v---i~~~~~~~~~~~~~~~~--~~gv  208 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL-KKL---GFDVA---FNYKTVKSLEETLKKAS--PDGY  208 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc---CCCEE---EeccccccHHHHHHHhC--CCCe
Confidence            578999999999999999988888899999999887765444 222   33322   23333223333333321  1369


Q ss_pred             CEEEEcCCC
Q 027248           91 DVVVSNAAA   99 (226)
Q Consensus        91 d~li~nag~   99 (226)
                      |+++.+.|.
T Consensus       209 dvv~d~~G~  217 (325)
T TIGR02825       209 DCYFDNVGG  217 (325)
T ss_pred             EEEEECCCH
Confidence            999988773

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.73  E-value=0.00066  Score=56.08  Aligned_cols=43  Identities=23%  Similarity=0.319  Sum_probs=37.6

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHH
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDE   51 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~   51 (226)
                      .++.||+++|+|. |++|+++++.|...|++|.+.+|++++...
T Consensus       147 ~~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~  189 (287)
T TIGR02853       147 FTIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLAR  189 (287)
T ss_pred             CCCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            4678999999998 669999999999999999999998765433

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=97.68  E-value=0.00095  Score=69.21  Aligned_cols=175  Identities=22%  Similarity=0.152  Sum_probs=112.2

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      +.|+.++|++.+++++.+++.+|.++|+.|+++...+. .   ..........+..+...-.+++.++.+++.+....+.
T Consensus      1753 ~~~~~~~v~~d~~~~~~~L~~~L~~~G~~v~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1828 (2582)
T TIGR02813      1753 QSGANALVIDDDGHNAGVLAEKLIAAGWQVAVVRSPWV-V---SHSASPLASAIASVTLGTIDDTSIEAVIKDIEEKTAQ 1828 (2582)
T ss_pred             ccCceeEEEcCCcchHHHHHHHHHhCCCeEEEeecccc-c---cccccccccccccccccccchHHHHHHHHhhhccccc
Confidence            44788889988999999999999999999877642211 0   0000001112223344555667778888888777789


Q ss_pred             CCEEEEcCCCCCCC-CccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchh------
Q 027248           90 IDVVVSNAAANPSV-DSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMY------  160 (226)
Q Consensus        90 id~li~nag~~~~~-~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y------  160 (226)
                      ++.+||..+..... ......   .....-...+...|.+.|.+.+.+..  ++.++.+|...|..+..+....      
T Consensus      1829 ~~g~i~l~~~~~~~~~~~~~~---~~~~~~~~~l~~~f~~ak~~~~~l~~~~~~~~~~vsr~~G~~g~~~~~~~~~~~~~ 1905 (2582)
T TIGR02813      1829 IDGFIHLQPQHKSVADKVDAI---ELPEAAKQSLMLAFLFAKLLNVKLATNARASFVTVSRIDGGFGYSNGDADSGTQQV 1905 (2582)
T ss_pred             cceEEEecccccccccccccc---ccchhhHHHHHHHHHHHHhhchhhccCCCeEEEEEEecCCccccCCcccccccccc
Confidence            99999987754210 011111   11111123455568888887776533  4578888888766654332221      


Q ss_pred             --hHhHHHHHHHHHHHHHHhCC-CeEEEEEecCc
Q 027248          161 --GVTKTALLGLTKALAAEMAP-DTRVNCVAPGF  191 (226)
Q Consensus       161 --~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~  191 (226)
                        ....+++.+|+|+++.|+.. .+|...+.|..
T Consensus      1906 ~~~~~~a~l~Gl~Ktl~~E~P~~~~r~vDl~~~~ 1939 (2582)
T TIGR02813      1906 KAELNQAALAGLTKTLNHEWNAVFCRALDLAPKL 1939 (2582)
T ss_pred             ccchhhhhHHHHHHhHHHHCCCCeEEEEeCCCCc
Confidence              33589999999999999976 67888887753

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.68  E-value=0.00023  Score=54.86  Aligned_cols=78  Identities=21%  Similarity=0.310  Sum_probs=48.1

Q ss_pred             cCCCEEEEEcC----------------CCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCH
Q 027248           10 FQGKVAIVTAS----------------TQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNG   73 (226)
Q Consensus        10 ~~gk~vlItGa----------------~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   73 (226)
                      ++||+||||+|                ||-.|.++|+.+..+|++|+++..... +..        ...+.  ..++.+.
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~~--------p~~~~--~i~v~sa   69 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LPP--------PPGVK--VIRVESA   69 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS-------------TTEE--EEE-SSH
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-ccc--------cccce--EEEecch
Confidence            47899999986                467899999999999999998888642 111        11233  3466666


Q ss_pred             HHHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 027248           74 QQRKNLINQTIEKFGKIDVVVSNAAANP  101 (226)
Q Consensus        74 ~~v~~~~~~~~~~~~~id~li~nag~~~  101 (226)
                      +++.+.+.+   .+..-|++|++|++..
T Consensus        70 ~em~~~~~~---~~~~~Di~I~aAAVsD   94 (185)
T PF04127_consen   70 EEMLEAVKE---LLPSADIIIMAAAVSD   94 (185)
T ss_dssp             HHHHHHHHH---HGGGGSEEEE-SB--S
T ss_pred             hhhhhhhcc---ccCcceeEEEecchhh
Confidence            665555444   4455699999999875

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>cd00704 MDH Malate dehydrogenase

Probab=97.67  E-value=0.00052  Score=57.62  Aligned_cols=112  Identities=15%  Similarity=0.143  Sum_probs=65.6

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCC-C------eEEEEecCc--chHHHHHHHHHhcCCcEEEEEeeCCCHHH--HH--HHH
Q 027248           14 VAIVTASTQGIGFGIAERLGLEG-A------SVVVSSRKQ--KNVDEAVVKLKARGIEVIGVVCHVSNGQQ--RK--NLI   80 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g-~------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~--v~--~~~   80 (226)
                      ++.||||+|.+|..++..|+..| +      +++++++++  +.++              ....|+.+...  ..  ..-
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~--------------g~~~Dl~d~~~~~~~~~~i~   67 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALE--------------GVVMELQDCAFPLLKGVVIT   67 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccc--------------eeeeehhhhcccccCCcEEe
Confidence            48999999999999999999866 2      499999987  4332              23334444320  00  000


Q ss_pred             HHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEe
Q 027248           81 NQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (226)
Q Consensus        81 ~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~s  146 (226)
                      ....+.+...|++|+.||....  +  ..+.   .+.+..|..-.-.+...+.++-.+++.++.+|
T Consensus        68 ~~~~~~~~~aDiVVitAG~~~~--~--g~tR---~dll~~N~~i~~~i~~~i~~~~~~~~iiivvs  126 (323)
T cd00704          68 TDPEEAFKDVDVAILVGAFPRK--P--GMER---ADLLRKNAKIFKEQGEALNKVAKPTVKVLVVG  126 (323)
T ss_pred             cChHHHhCCCCEEEEeCCCCCC--c--CCcH---HHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence            1222334589999999998542  1  1233   44566675444444444433322345666665

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=97.66  E-value=0.00052  Score=57.65  Aligned_cols=115  Identities=15%  Similarity=0.107  Sum_probs=70.0

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCCC-------eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHH--HH--HHH
Q 027248           14 VAIVTASTQGIGFGIAERLGLEGA-------SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRK--NL--INQ   82 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g~-------~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~--~~--~~~   82 (226)
                      ++.|+|++|.+|..++..|+..|.       ++++++++++..            .......|+.+.....  ..  ...
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~------------~a~g~~~Dl~d~~~~~~~~~~~~~~   68 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK------------VLEGVVMELMDCAFPLLDGVVPTHD   68 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc------------ccceeEeehhcccchhcCceeccCC
Confidence            378999999999999999998653       599999976431            1123344555554110  00  001


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEec
Q 027248           83 TIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISS  147 (226)
Q Consensus        83 ~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS  147 (226)
                      ..+.+...|++|+.||....  +     .+++.+.+..|+.-.-.+.+.+.++-.+++.++.+|.
T Consensus        69 ~~~~~~~aDiVVitAG~~~~--~-----~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvsN  126 (324)
T TIGR01758        69 PAVAFTDVDVAILVGAFPRK--E-----GMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVGN  126 (324)
T ss_pred             hHHHhCCCCEEEEcCCCCCC--C-----CCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCC
Confidence            13344589999999997542  1     2235677777865555555444443223456666664

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>cd08293 PTGR2 Prostaglandin reductase

Probab=97.63  E-value=0.00048  Score=57.99  Aligned_cols=78  Identities=14%  Similarity=0.140  Sum_probs=52.1

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCC
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id   91 (226)
                      ++++|+|++|++|.+.++.....|+ +|+.+++++++.+.+.+++   +.+..   .|..+.+ ..+.+.++.  .+.+|
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~l---Ga~~v---i~~~~~~-~~~~i~~~~--~~gvd  226 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSEL---GFDAA---INYKTDN-VAERLRELC--PEGVD  226 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhc---CCcEE---EECCCCC-HHHHHHHHC--CCCce
Confidence            8999999999999999988888898 7999999887765554433   33222   2333322 222222221  13699


Q ss_pred             EEEEcCCC
Q 027248           92 VVVSNAAA   99 (226)
Q Consensus        92 ~li~nag~   99 (226)
                      +++++.|.
T Consensus       227 ~vid~~g~  234 (345)
T cd08293         227 VYFDNVGG  234 (345)
T ss_pred             EEEECCCc
Confidence            99988773

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=97.61  E-value=0.00055  Score=57.04  Aligned_cols=75  Identities=21%  Similarity=0.352  Sum_probs=51.2

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      .|.+++|+|+++++|.++++.+...|.+|+.+.+++++.+..    ...+.+. ++  |.   +.   +.+.+ .+...+
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~~~~~-~~--~~---~~---~~~~~-~~~~~~  227 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL----KELGADY-VI--DG---SK---FSEDV-KKLGGA  227 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH----HHcCCcE-EE--ec---HH---HHHHH-HhccCC
Confidence            478999999999999999999999999999998877654443    2223211 11  22   11   22222 223479


Q ss_pred             CEEEEcCCC
Q 027248           91 DVVVSNAAA   99 (226)
Q Consensus        91 d~li~nag~   99 (226)
                      |++++++|.
T Consensus       228 d~v~~~~g~  236 (332)
T cd08259         228 DVVIELVGS  236 (332)
T ss_pred             CEEEECCCh
Confidence            999999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.60  E-value=0.0008  Score=55.51  Aligned_cols=77  Identities=13%  Similarity=0.060  Sum_probs=56.1

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      ++.+|+++|.|+ ||.|++++..|++.|+ +|.+++|+.++.+.+.+++........+.  ..   +++..       ..
T Consensus       124 ~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~--~~---~~~~~-------~~  190 (284)
T PRK12549        124 DASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARAT--AG---SDLAA-------AL  190 (284)
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEE--ec---cchHh-------hh
Confidence            467899999997 6799999999999997 69999999999988888876544333221  11   11111       12


Q ss_pred             CCCCEEEEcCC
Q 027248           88 GKIDVVVSNAA   98 (226)
Q Consensus        88 ~~id~li~nag   98 (226)
                      ...|+|||+..
T Consensus       191 ~~aDiVInaTp  201 (284)
T PRK12549        191 AAADGLVHATP  201 (284)
T ss_pred             CCCCEEEECCc
Confidence            36899999843

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.58  E-value=9.4e-05  Score=57.84  Aligned_cols=48  Identities=27%  Similarity=0.410  Sum_probs=41.9

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK   55 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~   55 (226)
                      ..+++||+++|+|.+ .+|+.+++.|.+.|++|++.++++++++...++
T Consensus        23 ~~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~   70 (200)
T cd01075          23 TDSLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAEL   70 (200)
T ss_pred             CCCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence            457899999999985 899999999999999999999998776666554

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK14968 putative methyltransferase; Provisional

Probab=97.57  E-value=0.0012  Score=50.63  Aligned_cols=122  Identities=19%  Similarity=0.174  Sum_probs=74.8

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCc---EEEEEeeCCCHHHHHHHHHHHHHH
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIE---VIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      ..+++++-.|++.|.   ++..+++.+.+++.++++++..+...+.+...+..   +.++.+|+.+.         +.+ 
T Consensus        22 ~~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~---------~~~-   88 (188)
T PRK14968         22 KKGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEP---------FRG-   88 (188)
T ss_pred             cCCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEecccccc---------ccc-
Confidence            467889999987665   45555555889999999998877776666544432   67777786442         111 


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHH---HHHHHHHHhhhhhcCCEEEEEec
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKS---SILLLQDAAPHLQKGSSVVLISS  147 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~---~~~~~~~~~~~l~~~~~iv~~sS  147 (226)
                       +.+|+++.|..+.. ..+.... .+.+...+..+..+   .-.+++.+.+.|+++|.++++.+
T Consensus        89 -~~~d~vi~n~p~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~Lk~gG~~~~~~~  149 (188)
T PRK14968         89 -DKFDVILFNPPYLP-TEEEEEW-DDWLNYALSGGKDGREVIDRFLDEVGRYLKPGGRILLLQS  149 (188)
T ss_pred             -cCceEEEECCCcCC-CCchhhh-hhhhhhhhccCcChHHHHHHHHHHHHHhcCCCeEEEEEEc
Confidence             27999999987654 2222211 11222222222111   23456777778888888776654

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=97.52  E-value=0.0015  Score=52.58  Aligned_cols=105  Identities=22%  Similarity=0.307  Sum_probs=69.0

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      ..|++++|+|+++ +|.++++.+...|.+|+.+++++++.+.+ .++   +... .  .|..+.+..+.+.   ....+.
T Consensus       133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~~-~--~~~~~~~~~~~~~---~~~~~~  201 (271)
T cd05188         133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELA-KEL---GADH-V--IDYKEEDLEEELR---LTGGGG  201 (271)
T ss_pred             CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHh---CCce-e--ccCCcCCHHHHHH---HhcCCC
Confidence            3578999999998 99999999999999999999987665443 222   2221 1  2433333333332   222357


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCc
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY  151 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~  151 (226)
                      +|++++++|..                          ...+.++..+++.|+++.++.....
T Consensus       202 ~d~vi~~~~~~--------------------------~~~~~~~~~l~~~G~~v~~~~~~~~  237 (271)
T cd05188         202 ADVVIDAVGGP--------------------------ETLAQALRLLRPGGRIVVVGGTSGG  237 (271)
T ss_pred             CCEEEECCCCH--------------------------HHHHHHHHhcccCCEEEEEccCCCC
Confidence            99999988741                          1233445556678899988876543

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.51  E-value=0.0022  Score=47.19  Aligned_cols=113  Identities=13%  Similarity=0.180  Sum_probs=70.8

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCC--CeEEEEecCcchHHHHHHHHHhc---CCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248           14 VAIVTASTQGIGFGIAERLGLEG--ASVVVSSRKQKNVDEAVVKLKAR---GIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      .+.|+|++|.+|.+++..|...+  .++++.++++++++....++...   ...-..+..  .+.+.           +.
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~--~~~~~-----------~~   68 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS--GDYEA-----------LK   68 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE--SSGGG-----------GT
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc--ccccc-----------cc
Confidence            37899999999999999999987  46999999988877776666543   111112222  22222           24


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEec
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISS  147 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS  147 (226)
                      .-|++|..+|....  +  ..+.   .+.++.|..-.-.+.+.+..+- .++.++.+|.
T Consensus        69 ~aDivvitag~~~~--~--g~sR---~~ll~~N~~i~~~~~~~i~~~~-p~~~vivvtN  119 (141)
T PF00056_consen   69 DADIVVITAGVPRK--P--GMSR---LDLLEANAKIVKEIAKKIAKYA-PDAIVIVVTN  119 (141)
T ss_dssp             TESEEEETTSTSSS--T--TSSH---HHHHHHHHHHHHHHHHHHHHHS-TTSEEEE-SS
T ss_pred             cccEEEEecccccc--c--cccH---HHHHHHhHhHHHHHHHHHHHhC-CccEEEEeCC
Confidence            78999999997542  1  1233   4445667544444444444432 3466666653

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=97.50  E-value=0.0014  Score=54.99  Aligned_cols=97  Identities=20%  Similarity=0.321  Sum_probs=69.0

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      .|++++|+|.+ |+|...++.....|++|+.++|++++++.+.+ +   +.+..+   |-++++..+.+-+       .+
T Consensus       166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~-l---GAd~~i---~~~~~~~~~~~~~-------~~  230 (339)
T COG1064         166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKK-L---GADHVI---NSSDSDALEAVKE-------IA  230 (339)
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHH-h---CCcEEE---EcCCchhhHHhHh-------hC
Confidence            58999999999 99998888877899999999999988755433 2   333322   4445555444333       39


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccC
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~  149 (226)
                      |++|.+++ ..           +               +...++.++++|+++.++-..
T Consensus       231 d~ii~tv~-~~-----------~---------------~~~~l~~l~~~G~~v~vG~~~  262 (339)
T COG1064         231 DAIIDTVG-PA-----------T---------------LEPSLKALRRGGTLVLVGLPG  262 (339)
T ss_pred             cEEEECCC-hh-----------h---------------HHHHHHHHhcCCEEEEECCCC
Confidence            99999988 32           1               234556667789999888774

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.49  E-value=0.00058  Score=56.27  Aligned_cols=79  Identities=16%  Similarity=0.155  Sum_probs=55.7

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      ++++|+++|.|+ ||.|++++..|.+.|+ +|.++.|+.++.+.+.+++.... .+.    .+...++..       +..
T Consensus       122 ~~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~-~~~----~~~~~~~~~-------~~~  188 (282)
T TIGR01809       122 PLAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVG-VIT----RLEGDSGGL-------AIE  188 (282)
T ss_pred             ccCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcC-cce----eccchhhhh-------hcc
Confidence            467899999976 8999999999999997 59999999998888877764321 111    111112211       122


Q ss_pred             CCCCEEEEcCCCC
Q 027248           88 GKIDVVVSNAAAN  100 (226)
Q Consensus        88 ~~id~li~nag~~  100 (226)
                      ...|+|||+....
T Consensus       189 ~~~DiVInaTp~g  201 (282)
T TIGR01809       189 KAAEVLVSTVPAD  201 (282)
T ss_pred             cCCCEEEECCCCC
Confidence            4789999998764

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.49  E-value=0.0017  Score=54.20  Aligned_cols=113  Identities=14%  Similarity=0.125  Sum_probs=71.3

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCC--CeEEEEecCcchHHHHHHHHHhcC----CcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEG--ASVVVSSRKQKNVDEAVVKLKARG----IEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      +.+.|.|+ |++|.+++..|+..|  .+++++++++++.+....++....    ....+. .  .+.+.           
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~-~--~~~~~-----------   65 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIK-A--GDYSD-----------   65 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEE-c--CCHHH-----------
Confidence            35788996 899999999999999  579999999998887777765431    122221 1  12211           


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEecc
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~  148 (226)
                      ....|++|+++|....  +  ..+.   .+.++.|..-...+.+.+..+ ..++.++++|..
T Consensus        66 l~~aDIVIitag~~~~--~--g~~R---~dll~~N~~i~~~~~~~i~~~-~~~~~vivvsNP  119 (306)
T cd05291          66 CKDADIVVITAGAPQK--P--GETR---LDLLEKNAKIMKSIVPKIKAS-GFDGIFLVASNP  119 (306)
T ss_pred             hCCCCEEEEccCCCCC--C--CCCH---HHHHHHHHHHHHHHHHHHHHh-CCCeEEEEecCh
Confidence            2489999999997542  1  2233   344555654444444444332 224677777744

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=97.47  E-value=0.0015  Score=53.82  Aligned_cols=80  Identities=15%  Similarity=0.290  Sum_probs=54.8

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      .|++++|+|+++++|.++++.+...|++|+++++++++.+.+ .++   +.+.   ..|..+.+..+.+.... . .+.+
T Consensus       139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~---g~~~---~~~~~~~~~~~~~~~~~-~-~~~~  209 (323)
T cd05276         139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RAL---GADV---AINYRTEDFAEEVKEAT-G-GRGV  209 (323)
T ss_pred             CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc---CCCE---EEeCCchhHHHHHHHHh-C-CCCe
Confidence            578999999999999999999999999999999987665544 222   3221   23444433333322211 1 1369


Q ss_pred             CEEEEcCCC
Q 027248           91 DVVVSNAAA   99 (226)
Q Consensus        91 d~li~nag~   99 (226)
                      |++++++|.
T Consensus       210 d~vi~~~g~  218 (323)
T cd05276         210 DVILDMVGG  218 (323)
T ss_pred             EEEEECCch
Confidence            999999884

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=97.47  E-value=0.0025  Score=53.51  Aligned_cols=152  Identities=11%  Similarity=0.070  Sum_probs=92.0

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCC-------eEEEEecCcch--HHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHH
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGA-------SVVVSSRKQKN--VDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQ   82 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~-------~v~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   82 (226)
                      .++|.|+|++|.+|..++..|+..|.       ++++++++++.  ++...-++......... ...++.  .       
T Consensus         2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~-~~~i~~--~-------   71 (322)
T cd01338           2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLA-EIVITD--D-------   71 (322)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccC-ceEEec--C-------
Confidence            36799999999999999999998874       79999996543  44444444332100000 011111  0       


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCC--------cC-C
Q 027248           83 TIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG--------YQ-P  153 (226)
Q Consensus        83 ~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~--------~~-~  153 (226)
                      ..+.+..-|++|..||...  ++  ..+.   .+.+..|..-.-.+...+..+-.+++.++.+|...-        .. .
T Consensus        72 ~~~~~~daDivvitaG~~~--k~--g~tR---~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k~sg~  144 (322)
T cd01338          72 PNVAFKDADWALLVGAKPR--GP--GMER---ADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALIAMKNAPD  144 (322)
T ss_pred             cHHHhCCCCEEEEeCCCCC--CC--CCcH---HHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHHHHHcCC
Confidence            1122348999999999854  22  2233   344666754444444444333212456666664321        13 2


Q ss_pred             CCCCchhhHhHHHHHHHHHHHHHHhCC
Q 027248          154 QSSMAMYGVTKTALLGLTKALAAEMAP  180 (226)
Q Consensus       154 ~~~~~~Y~~sKaa~~~~~~~la~e~~~  180 (226)
                      .|....|+.++..-..|...+++.+..
T Consensus       145 ~p~~~ViG~t~LDs~Rl~~~la~~lgv  171 (322)
T cd01338         145 IPPDNFTAMTRLDHNRAKSQLAKKAGV  171 (322)
T ss_pred             CChHheEEehHHHHHHHHHHHHHHhCc
Confidence            566778999999999999999999853

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=97.45  E-value=0.0012  Score=54.46  Aligned_cols=81  Identities=12%  Similarity=0.093  Sum_probs=56.1

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      ++++|+++|.|+ ||-|++++-.|++.|+ ++.++.|+.++.+.+.+.+....+.......+   ....+..       .
T Consensus       124 ~~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~~---~~~~~~~-------~  192 (283)
T PRK14027        124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVD---ARGIEDV-------I  192 (283)
T ss_pred             CcCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEEecC---HhHHHHH-------H
Confidence            467899999997 8999999999999996 59999999999888887765432221111122   1111111       1


Q ss_pred             CCCCEEEEcCCCC
Q 027248           88 GKIDVVVSNAAAN  100 (226)
Q Consensus        88 ~~id~li~nag~~  100 (226)
                      ...|++||+....
T Consensus       193 ~~~divINaTp~G  205 (283)
T PRK14027        193 AAADGVVNATPMG  205 (283)
T ss_pred             hhcCEEEEcCCCC
Confidence            3689999887653

>PRK05086 malate dehydrogenase; Provisional

Probab=97.44  E-value=0.0012  Score=55.31  Aligned_cols=115  Identities=17%  Similarity=0.162  Sum_probs=63.8

Q ss_pred             EEEEEcCCCchhHHHHHHHHh-C--CCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           14 VAIVTASTQGIGFGIAERLGL-E--GASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~-~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      .++|+||+|++|.+++..|.. .  +..+++.+|++.. +...-.+....... .+..  .+.+++.       +.....
T Consensus         2 KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~-~g~alDl~~~~~~~-~i~~--~~~~d~~-------~~l~~~   70 (312)
T PRK05086          2 KVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVT-PGVAVDLSHIPTAV-KIKG--FSGEDPT-------PALEGA   70 (312)
T ss_pred             EEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCC-cceehhhhcCCCCc-eEEE--eCCCCHH-------HHcCCC
Confidence            589999999999999998855 3  3568898987542 11111222211111 1111  1111111       112379


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEecc
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~  148 (226)
                      |++|.++|....  +  ..+   -.+.+..|....-.+.+.+.++-  ..++|.+.|.
T Consensus        71 DiVIitaG~~~~--~--~~~---R~dll~~N~~i~~~ii~~i~~~~--~~~ivivvsN  119 (312)
T PRK05086         71 DVVLISAGVARK--P--GMD---RSDLFNVNAGIVKNLVEKVAKTC--PKACIGIITN  119 (312)
T ss_pred             CEEEEcCCCCCC--C--CCC---HHHHHHHHHHHHHHHHHHHHHhC--CCeEEEEccC
Confidence            999999998542  1  122   24556777766666666665541  2245555544

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.43  E-value=0.00025  Score=63.52  Aligned_cols=47  Identities=26%  Similarity=0.362  Sum_probs=41.8

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHH
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKL   56 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~   56 (226)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+.+.+++
T Consensus       376 ~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l  422 (529)
T PLN02520        376 PLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV  422 (529)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence            577999999999 69999999999999999999999988877776655

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.40  E-value=0.00056  Score=59.31  Aligned_cols=75  Identities=7%  Similarity=0.115  Sum_probs=54.6

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      +++||+++|.|+ ||.|+.+++.|.+.|. ++.++.|+.++.+.+.+++..  ..  .+  +   .+       ++.+..
T Consensus       178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~--~~--~~--~---~~-------~l~~~l  240 (414)
T PRK13940        178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRN--AS--AH--Y---LS-------ELPQLI  240 (414)
T ss_pred             CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcC--Ce--Ee--c---HH-------HHHHHh
Confidence            578999999998 9999999999999996 599999998887777666521  11  11  1   12       222333


Q ss_pred             CCCCEEEEcCCCC
Q 027248           88 GKIDVVVSNAAAN  100 (226)
Q Consensus        88 ~~id~li~nag~~  100 (226)
                      ...|++|++.+..
T Consensus       241 ~~aDiVI~aT~a~  253 (414)
T PRK13940        241 KKADIIIAAVNVL  253 (414)
T ss_pred             ccCCEEEECcCCC
Confidence            4789999888753

>PRK06849 hypothetical protein; Provisional

Probab=97.40  E-value=0.002  Score=55.54  Aligned_cols=83  Identities=8%  Similarity=0.142  Sum_probs=53.6

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      +.|+|||||++..+|+.+++.|.+.|++|++++.++...........    ....+...-.+++...+.+.++.++. ++
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~d----~~~~~p~p~~d~~~~~~~L~~i~~~~-~i   77 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAVD----GFYTIPSPRWDPDAYIQALLSIVQRE-NI   77 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhhh----heEEeCCCCCCHHHHHHHHHHHHHHc-CC
Confidence            35899999999999999999999999999999998755432211111    11111112234444334444444443 68


Q ss_pred             CEEEEcCC
Q 027248           91 DVVVSNAA   98 (226)
Q Consensus        91 d~li~nag   98 (226)
                      |++|....
T Consensus        78 d~vIP~~e   85 (389)
T PRK06849         78 DLLIPTCE   85 (389)
T ss_pred             CEEEECCh
Confidence            99987654

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=97.39  E-value=0.0089  Score=49.65  Aligned_cols=41  Identities=27%  Similarity=0.366  Sum_probs=36.1

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchH
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNV   49 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~   49 (226)
                      .++.|++++|.|. |++|+.+++.|...|++|.+.+|++++.
T Consensus       148 ~~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~  188 (296)
T PRK08306        148 ITIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHL  188 (296)
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence            4567999999997 6799999999999999999999987653

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=97.38  E-value=0.0023  Score=56.71  Aligned_cols=114  Identities=12%  Similarity=0.145  Sum_probs=75.0

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCC-------------CHHHH
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS-------------NGQQR   76 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~-------------~~~~v   76 (226)
                      ..+.+++|.|+ |.+|...++.+...|++|++++++.++++.... +   +.+  ++..|..             +.+..
T Consensus       162 vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~-l---Ga~--~v~v~~~e~g~~~~gYa~~~s~~~~  234 (511)
T TIGR00561       162 VPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS-M---GAE--FLELDFKEEGGSGDGYAKVMSEEFI  234 (511)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c---CCe--EEeccccccccccccceeecCHHHH
Confidence            34579999995 899999999999999999999998876544332 2   322  2333431             23444


Q ss_pred             HHHHHHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCC
Q 027248           77 KNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG  150 (226)
Q Consensus        77 ~~~~~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~  150 (226)
                      +...+.+.+.....|++|+++-+.....+                    ..+++..+..|++++.||.+++..+
T Consensus       235 ~~~~~~~~e~~~~~DIVI~TalipG~~aP--------------------~Lit~emv~~MKpGsvIVDlA~d~G  288 (511)
T TIGR00561       235 AAEMELFAAQAKEVDIIITTALIPGKPAP--------------------KLITEEMVDSMKAGSVIVDLAAEQG  288 (511)
T ss_pred             HHHHHHHHHHhCCCCEEEECcccCCCCCC--------------------eeehHHHHhhCCCCCEEEEeeeCCC
Confidence            44555555666789999999955431111                    2234445566677788888877654

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.38  E-value=0.0004  Score=57.37  Aligned_cols=77  Identities=21%  Similarity=0.190  Sum_probs=62.0

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCE
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~   92 (226)
                      ..++|-||+|.-|.-++++|+++|....+.+||.+++..+...+   +.+...+.+++  ++.++..++       ..++
T Consensus         7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~L---G~~~~~~p~~~--p~~~~~~~~-------~~~V   74 (382)
T COG3268           7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASL---GPEAAVFPLGV--PAALEAMAS-------RTQV   74 (382)
T ss_pred             eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhc---CccccccCCCC--HHHHHHHHh-------cceE
Confidence            45899999999999999999999999999999999999888877   34444454444  555555544       7889


Q ss_pred             EEEcCCCCC
Q 027248           93 VVSNAAANP  101 (226)
Q Consensus        93 li~nag~~~  101 (226)
                      |+|++|-..
T Consensus        75 VlncvGPyt   83 (382)
T COG3268          75 VLNCVGPYT   83 (382)
T ss_pred             EEecccccc
Confidence            999999764

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=97.36  E-value=0.003  Score=51.75  Aligned_cols=106  Identities=19%  Similarity=0.257  Sum_probs=75.3

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh-CC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF-GK   89 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-~~   89 (226)
                      .|+|++|++|+|.+|.-..+--.-+|++|+-++-.+++..-+.+++.   .+.   -.|-..+    ++.+.+.+.. ..
T Consensus       150 ~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lG---fD~---~idyk~~----d~~~~L~~a~P~G  219 (340)
T COG2130         150 AGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELG---FDA---GIDYKAE----DFAQALKEACPKG  219 (340)
T ss_pred             CCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcC---Cce---eeecCcc----cHHHHHHHHCCCC
Confidence            48999999999999976665545579999999999988776666552   221   1244444    3444555555 47


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCC
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP  153 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~  153 (226)
                      ||+.+-|.|.-                           +..+.+++|...+||+.+.-.+.+..
T Consensus       220 IDvyfeNVGg~---------------------------v~DAv~~~ln~~aRi~~CG~IS~YN~  256 (340)
T COG2130         220 IDVYFENVGGE---------------------------VLDAVLPLLNLFARIPVCGAISQYNA  256 (340)
T ss_pred             eEEEEEcCCch---------------------------HHHHHHHhhccccceeeeeehhhcCC
Confidence            99999999862                           24567777777889988877766543

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=97.36  E-value=0.0033  Score=52.43  Aligned_cols=103  Identities=23%  Similarity=0.313  Sum_probs=66.2

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      .|.+++|+|+++++|.++++.+.+.|++|+.+.++.++.+.+.+.+   +.+ .+  .|..+.+..+.+.+ ..  .+.+
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~---g~~-~~--~~~~~~~~~~~v~~-~~--~~~~  215 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEEL---GFD-AA--INYKTPDLAEALKE-AA--PDGI  215 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhc---CCc-eE--EecCChhHHHHHHH-hc--cCCc
Confidence            5789999999999999999999999999999988876655443322   221 11  23333332222222 21  1479


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccC
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~  149 (226)
                      |+++++.|..                           ..+..+..+++.|+++.+++..
T Consensus       216 d~vi~~~g~~---------------------------~~~~~~~~l~~~G~~v~~g~~~  247 (329)
T cd05288         216 DVYFDNVGGE---------------------------ILDAALTLLNKGGRIALCGAIS  247 (329)
T ss_pred             eEEEEcchHH---------------------------HHHHHHHhcCCCceEEEEeecc
Confidence            9999887631                           1233344556678888887554

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=97.34  E-value=0.0035  Score=52.91  Aligned_cols=76  Identities=21%  Similarity=0.267  Sum_probs=51.4

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      .|++++|+|+ |++|...++.+...|+ +|+++++++++++.+. ++   |.+..   .|..+. ++.+    +.+..+.
T Consensus       169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~-~l---Ga~~v---i~~~~~-~~~~----~~~~~g~  235 (343)
T PRK09880        169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAR-EM---GADKL---VNPQND-DLDH----YKAEKGY  235 (343)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHH-Hc---CCcEE---ecCCcc-cHHH----HhccCCC
Confidence            6899999986 8999999988888898 5888999887765432 23   43322   243332 2222    2222356


Q ss_pred             CCEEEEcCCC
Q 027248           90 IDVVVSNAAA   99 (226)
Q Consensus        90 id~li~nag~   99 (226)
                      +|++|.+.|.
T Consensus       236 ~D~vid~~G~  245 (343)
T PRK09880        236 FDVSFEVSGH  245 (343)
T ss_pred             CCEEEECCCC
Confidence            9999999884

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=97.32  E-value=0.0022  Score=53.50  Aligned_cols=79  Identities=14%  Similarity=0.219  Sum_probs=52.8

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      .|.+++|+||+|++|..+++.....|++|+.+++++++.+.+.+ +   +.+. +  .|-.+++..+. +.+..  .+.+
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~-~---Ga~~-v--i~~~~~~~~~~-v~~~~--~~gv  212 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKE-L---GFDA-V--FNYKTVSLEEA-LKEAA--PDGI  212 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c---CCCE-E--EeCCCccHHHH-HHHHC--CCCc
Confidence            57899999999999999988888899999999988876554432 2   3322 1  24433332222 22221  1369


Q ss_pred             CEEEEcCCC
Q 027248           91 DVVVSNAAA   99 (226)
Q Consensus        91 d~li~nag~   99 (226)
                      |+++.+.|.
T Consensus       213 d~vld~~g~  221 (329)
T cd08294         213 DCYFDNVGG  221 (329)
T ss_pred             EEEEECCCH
Confidence            999987763

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.31  E-value=0.0025  Score=53.89  Aligned_cols=80  Identities=19%  Similarity=0.332  Sum_probs=55.5

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCc---------------------chHHHHHHHHHhcCCc--EE
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQ---------------------KNVDEAVVKLKARGIE--VI   64 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~---------------------~~~~~~~~~~~~~~~~--~~   64 (226)
                      .+++++|+|.|+ ||+|..+++.|++.|. ++.+++++.                     .+.+.+.+.+.+..+.  +.
T Consensus        21 ~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~   99 (338)
T PRK12475         21 KIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIV   99 (338)
T ss_pred             hhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEE
Confidence            466789999996 7899999999999997 699999974                     2444455566555444  44


Q ss_pred             EEEeeCCCHHHHHHHHHHHHHHhCCCCEEEEcC
Q 027248           65 GVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNA   97 (226)
Q Consensus        65 ~~~~Dv~~~~~v~~~~~~~~~~~~~id~li~na   97 (226)
                      .+..|++ .+.+++++       ...|++|.+.
T Consensus       100 ~~~~~~~-~~~~~~~~-------~~~DlVid~~  124 (338)
T PRK12475        100 PVVTDVT-VEELEELV-------KEVDLIIDAT  124 (338)
T ss_pred             EEeccCC-HHHHHHHh-------cCCCEEEEcC
Confidence            5555664 33344432       3688888665

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=97.31  E-value=0.002  Score=54.67  Aligned_cols=81  Identities=22%  Similarity=0.288  Sum_probs=55.1

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      -+|+.+||.||+||+|.+.++-....|+..+++.++.++. ++.+++   +.+..   .|..+++.++...+..   .+.
T Consensus       156 ~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~-~l~k~l---GAd~v---vdy~~~~~~e~~kk~~---~~~  225 (347)
T KOG1198|consen  156 SKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKL-ELVKKL---GADEV---VDYKDENVVELIKKYT---GKG  225 (347)
T ss_pred             CCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchH-HHHHHc---CCcEe---ecCCCHHHHHHHHhhc---CCC
Confidence            4688999999999999999988888896666666666554 333333   33222   3777744333322221   568


Q ss_pred             CCEEEEcCCCC
Q 027248           90 IDVVVSNAAAN  100 (226)
Q Consensus        90 id~li~nag~~  100 (226)
                      +|+++.+.|..
T Consensus       226 ~DvVlD~vg~~  236 (347)
T KOG1198|consen  226 VDVVLDCVGGS  236 (347)
T ss_pred             ccEEEECCCCC
Confidence            99999999864

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=97.28  E-value=0.0053  Score=54.56  Aligned_cols=112  Identities=14%  Similarity=0.184  Sum_probs=72.5

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCH-------------HHH
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNG-------------QQR   76 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-------------~~v   76 (226)
                      ..+.+++|+|+ |.+|+..+..+...|++|+++++++++++...+ +   |.+..  ..|..+.             +..
T Consensus       163 ~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes-l---GA~~v--~i~~~e~~~~~~gya~~~s~~~~  235 (509)
T PRK09424        163 VPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES-M---GAEFL--ELDFEEEGGSGDGYAKVMSEEFI  235 (509)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c---CCeEE--EeccccccccccchhhhcchhHH
Confidence            45889999985 689999999999999999999999987665443 3   44422  2233221             111


Q ss_pred             HHHHHHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEecc
Q 027248           77 KNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (226)
Q Consensus        77 ~~~~~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~  148 (226)
                      +...+.+.+..+..|++|.++|......                    +..+++..+..|++++.|+.++..
T Consensus       236 ~~~~~~~~~~~~gaDVVIetag~pg~~a--------------------P~lit~~~v~~mkpGgvIVdvg~~  287 (509)
T PRK09424        236 KAEMALFAEQAKEVDIIITTALIPGKPA--------------------PKLITAEMVASMKPGSVIVDLAAE  287 (509)
T ss_pred             HHHHHHHHhccCCCCEEEECCCCCcccC--------------------cchHHHHHHHhcCCCCEEEEEccC
Confidence            2222222222357999999999754111                    223345667777888899988874

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=97.27  E-value=0.00024  Score=56.09  Aligned_cols=146  Identities=21%  Similarity=0.273  Sum_probs=96.2

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhC-CC-eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLE-GA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~-g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      +-.+++|||+-|-+|..+++.|..+ |- +|++.+..+.....     .+.|+   ++..|+-|...+++.+-.     .
T Consensus        43 ~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~V-----~~~GP---yIy~DILD~K~L~eIVVn-----~  109 (366)
T KOG2774|consen   43 KAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPANV-----TDVGP---YIYLDILDQKSLEEIVVN-----K  109 (366)
T ss_pred             CCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchhh-----cccCC---chhhhhhccccHHHhhcc-----c
Confidence            4568999999999999999999764 64 47777766544221     22232   566788888887765442     3


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCC------------CC
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQ------------SS  156 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~------------~~  156 (226)
                      ++|-|||-.+..+.      ..+....-..++|+.|.-++.+.+..+-   -++..-|...++.|.            .+
T Consensus       110 RIdWL~HfSALLSA------vGE~NVpLA~~VNI~GvHNil~vAa~~k---L~iFVPSTIGAFGPtSPRNPTPdltIQRP  180 (366)
T KOG2774|consen  110 RIDWLVHFSALLSA------VGETNVPLALQVNIRGVHNILQVAAKHK---LKVFVPSTIGAFGPTSPRNPTPDLTIQRP  180 (366)
T ss_pred             ccceeeeHHHHHHH------hcccCCceeeeecchhhhHHHHHHHHcC---eeEeecccccccCCCCCCCCCCCeeeecC
Confidence            89999987664321      1112223456789999999888876652   134444444444321            24


Q ss_pred             CchhhHhHHHHHHHHHHHHHHh
Q 027248          157 MAMYGVTKTALLGLTKALAAEM  178 (226)
Q Consensus       157 ~~~Y~~sKaa~~~~~~~la~e~  178 (226)
                      ...|+.||--.+.+-+.+...+
T Consensus       181 RTIYGVSKVHAEL~GEy~~hrF  202 (366)
T KOG2774|consen  181 RTIYGVSKVHAELLGEYFNHRF  202 (366)
T ss_pred             ceeechhHHHHHHHHHHHHhhc
Confidence            5679999998888887776665

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.24  E-value=0.0059  Score=51.16  Aligned_cols=112  Identities=14%  Similarity=0.130  Sum_probs=72.6

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCC--eEEEEecCcchHHHHHHHHHhcC---CcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKARG---IEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      +++++.|+|+ |++|.+++..|+..|.  ++++.+++++.++....++....   .+..+ ..  .+.+           
T Consensus         5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i-~~--~~~~-----------   69 (315)
T PRK00066          5 QHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKI-YA--GDYS-----------   69 (315)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEE-Ee--CCHH-----------
Confidence            4678999998 9999999999999985  69999999998887777776442   12222 11  1111           


Q ss_pred             HhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc---CCEEEEEecc
Q 027248           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSI  148 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~---~~~iv~~sS~  148 (226)
                      .+..-|++|..||....  +  ..+.   .+.++.|..-    ++.+.+.+++   ++.++++|-.
T Consensus        70 ~~~~adivIitag~~~k--~--g~~R---~dll~~N~~i----~~~i~~~i~~~~~~~~vivvsNP  124 (315)
T PRK00066         70 DCKDADLVVITAGAPQK--P--GETR---LDLVEKNLKI----FKSIVGEVMASGFDGIFLVASNP  124 (315)
T ss_pred             HhCCCCEEEEecCCCCC--C--CCCH---HHHHHHHHHH----HHHHHHHHHHhCCCeEEEEccCc
Confidence            13489999999998642  1  2233   3445556433    3444444432   4677777643

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.21  E-value=0.0053  Score=50.73  Aligned_cols=103  Identities=18%  Similarity=0.182  Sum_probs=69.0

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCC-CHHHHHHHHHHHHHHhCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS-NGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~-~~~~v~~~~~~~~~~~~~   89 (226)
                      .|+++.|+|++| ||.--++.-.+.|++|+.++++..+.+++.+.+   |.+..   .|.+ +++.++++.+       .
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~L---GAd~f---v~~~~d~d~~~~~~~-------~  246 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSL---GADVF---VDSTEDPDIMKAIMK-------T  246 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhc---Cccee---EEecCCHHHHHHHHH-------h
Confidence            699999999988 987666655567999999999987777776655   44443   3666 6776666555       4


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCc
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY  151 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~  151 (226)
                      .|.+++.+--.. .                       +-+..++.+++.+|++|+++-....
T Consensus       247 ~dg~~~~v~~~a-~-----------------------~~~~~~~~~lk~~Gt~V~vg~p~~~  284 (360)
T KOG0023|consen  247 TDGGIDTVSNLA-E-----------------------HALEPLLGLLKVNGTLVLVGLPEKP  284 (360)
T ss_pred             hcCcceeeeecc-c-----------------------cchHHHHHHhhcCCEEEEEeCcCCc
Confidence            455554432111 0                       1123445566778999999877653

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=97.18  E-value=0.0019  Score=49.41  Aligned_cols=43  Identities=26%  Similarity=0.336  Sum_probs=36.3

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVD   50 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~   50 (226)
                      ...+.||++.|.|. |.||+++++.|...|++|+..+|+.....
T Consensus        31 ~~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~   73 (178)
T PF02826_consen   31 GRELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEE   73 (178)
T ss_dssp             BS-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHH
T ss_pred             ccccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhh
Confidence            35688999999975 89999999999999999999999987544

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.18  E-value=0.0059  Score=47.79  Aligned_cols=82  Identities=17%  Similarity=0.293  Sum_probs=54.1

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecC-------------------cchHHHHHHHHHhcCCcEEE--
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRK-------------------QKNVDEAVVKLKARGIEVIG--   65 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~-------------------~~~~~~~~~~~~~~~~~~~~--   65 (226)
                      ..+++++|+|.| .||+|..+++.|+..|. ++.+++.+                   ..+.+.+.+.+.+..+.+.+  
T Consensus        17 ~kl~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~   95 (202)
T TIGR02356        17 QRLLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTA   95 (202)
T ss_pred             HHhcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEE
Confidence            346788999998 67999999999999997 69999988                   23444555566555554433  


Q ss_pred             EEeeCCCHHHHHHHHHHHHHHhCCCCEEEEcCC
Q 027248           66 VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAA   98 (226)
Q Consensus        66 ~~~Dv~~~~~v~~~~~~~~~~~~~id~li~nag   98 (226)
                      +..++. ++.+.++       +...|++|.+..
T Consensus        96 ~~~~i~-~~~~~~~-------~~~~D~Vi~~~d  120 (202)
T TIGR02356        96 LKERVT-AENLELL-------INNVDLVLDCTD  120 (202)
T ss_pred             ehhcCC-HHHHHHH-------HhCCCEEEECCC
Confidence            222332 2233322       237898887653

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=97.17  E-value=0.0099  Score=47.71  Aligned_cols=144  Identities=17%  Similarity=0.213  Sum_probs=94.5

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      .|-++++--|+||+|..+++.+...|++++.+..+.++.+.+++    .|.+..   .|-+.++-++.+.+-.  +...+
T Consensus       146 pGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~ake----nG~~h~---I~y~~eD~v~~V~kiT--ngKGV  216 (336)
T KOG1197|consen  146 PGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAKE----NGAEHP---IDYSTEDYVDEVKKIT--NGKGV  216 (336)
T ss_pred             CCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHHh----cCCcce---eeccchhHHHHHHhcc--CCCCc
Confidence            47899999999999999999999999999999988877655432    233221   2555555444433311  12369


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCC---------------CC
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP---------------QS  155 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~---------------~~  155 (226)
                      |++....|...                           +...+..+++.|.+|...-.++..+               .|
T Consensus       217 d~vyDsvG~dt---------------------------~~~sl~~Lk~~G~mVSfG~asgl~~p~~l~~ls~k~l~lvrp  269 (336)
T KOG1197|consen  217 DAVYDSVGKDT---------------------------FAKSLAALKPMGKMVSFGNASGLIDPIPLNQLSPKALQLVRP  269 (336)
T ss_pred             eeeeccccchh---------------------------hHHHHHHhccCceEEEeccccCCCCCeehhhcChhhhhhccH
Confidence            99988777521                           1122334556777777666655422               23


Q ss_pred             CCchhhHhHHHHHHHHHHHHHHhCC---CeEEEEEecC
Q 027248          156 SMAMYGVTKTALLGLTKALAAEMAP---DTRVNCVAPG  190 (226)
Q Consensus       156 ~~~~Y~~sKaa~~~~~~~la~e~~~---~i~v~~v~Pg  190 (226)
                      ..-.|-....-+..++..+-.++.+   +|+++.+.|-
T Consensus       270 sl~gYi~g~~el~~~v~rl~alvnsg~lk~~I~~~ypl  307 (336)
T KOG1197|consen  270 SLLGYIDGEVELVSYVARLFALVNSGHLKIHIDHVYPL  307 (336)
T ss_pred             hhhcccCCHHHHHHHHHHHHHHhhcCccceeeeeecch
Confidence            4556777777777777666666644   6888888874

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=97.16  E-value=0.0047  Score=44.39  Aligned_cols=76  Identities=16%  Similarity=0.238  Sum_probs=54.8

Q ss_pred             EEEEEcCCCchhHHHHHHHHh-CCCeE-EEEecCc----------------------chHHHHHHHHHhcCCcEEEEEee
Q 027248           14 VAIVTASTQGIGFGIAERLGL-EGASV-VVSSRKQ----------------------KNVDEAVVKLKARGIEVIGVVCH   69 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~-~g~~v-~~~~r~~----------------------~~~~~~~~~~~~~~~~~~~~~~D   69 (226)
                      +|+|+|++|-+|+.+++.+.+ .+.++ ..++|++                      +.++...++     .+   +..|
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~-----~D---VvID   73 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE-----AD---VVID   73 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH------S---EEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc-----CC---EEEE
Confidence            488999999999999999999 67884 4666766                      223333222     23   4459


Q ss_pred             CCCHHHHHHHHHHHHHHhCCCCEEEEcCCC
Q 027248           70 VSNGQQRKNLINQTIEKFGKIDVVVSNAAA   99 (226)
Q Consensus        70 v~~~~~v~~~~~~~~~~~~~id~li~nag~   99 (226)
                      ++.++.+...++...+.  ++.+++-+.|.
T Consensus        74 fT~p~~~~~~~~~~~~~--g~~~ViGTTG~  101 (124)
T PF01113_consen   74 FTNPDAVYDNLEYALKH--GVPLVIGTTGF  101 (124)
T ss_dssp             ES-HHHHHHHHHHHHHH--T-EEEEE-SSS
T ss_pred             cCChHHhHHHHHHHHhC--CCCEEEECCCC
Confidence            99999999999988887  88889888876

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=97.16  E-value=0.0024  Score=52.77  Aligned_cols=82  Identities=13%  Similarity=0.208  Sum_probs=52.6

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcc---hHHHHHHHHHhcCCc-EEEEEeeCCCHHHHHHHHHH
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQK---NVDEAVVKLKARGIE-VIGVVCHVSNGQQRKNLINQ   82 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~---~~~~~~~~~~~~~~~-~~~~~~Dv~~~~~v~~~~~~   82 (226)
                      .++++|+++|.|+ ||-+++++-.|+..|. +|.++.|+++   +.+.+.+.+...... +..  .+..+.+.+      
T Consensus       120 ~~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~--~~~~~~~~l------  190 (288)
T PRK12749        120 FDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTV--TDLADQQAF------  190 (288)
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEE--echhhhhhh------
Confidence            4578999999997 5559999999999996 6999999964   666666655432211 111  122111111      


Q ss_pred             HHHHhCCCCEEEEcCCC
Q 027248           83 TIEKFGKIDVVVSNAAA   99 (226)
Q Consensus        83 ~~~~~~~id~li~nag~   99 (226)
                       .+.....|+|||+.-+
T Consensus       191 -~~~~~~aDivINaTp~  206 (288)
T PRK12749        191 -AEALASADILTNGTKV  206 (288)
T ss_pred             -hhhcccCCEEEECCCC
Confidence             1123478999987654

>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]

Probab=97.16  E-value=0.041  Score=45.01  Aligned_cols=167  Identities=19%  Similarity=0.247  Sum_probs=98.9

Q ss_pred             CCCEEEEEcCCCchhHHHHH--HHHhCCCeEEE--EecC-----cchH----HHHHHHH-HhcCCcEEEEEeeCCCHHHH
Q 027248           11 QGKVAIVTASTQGIGFGIAE--RLGLEGASVVV--SSRK-----QKNV----DEAVVKL-KARGIEVIGVVCHVSNGQQR   76 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~--~l~~~g~~v~~--~~r~-----~~~~----~~~~~~~-~~~~~~~~~~~~Dv~~~~~v   76 (226)
                      ..|++||.|+++|.|++.--  .|- .|+..+-  ..|-     +...    +....++ .+.|--..-+..|.-+.+--
T Consensus        40 gPKkVLviGaSsGyGLa~RIsaaFG-~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~kGlyAksingDaFS~e~k  118 (398)
T COG3007          40 GPKKVLVIGASSGYGLAARISAAFG-PGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQKGLYAKSINGDAFSDEMK  118 (398)
T ss_pred             CCceEEEEecCCcccHHHHHHHHhC-CCCceeeEEeecCCccCCCcchhhhHHHHHHHHHHhcCceeeecccchhhHHHH
Confidence            36899999999999998443  333 4554322  2221     1110    1122233 34455566788899888888


Q ss_pred             HHHHHHHHHHhCCCCEEEEcCCCCCCCCc---------------------------------cccccHHHHHHHHHHHHH
Q 027248           77 KNLINQTIEKFGKIDVVVSNAAANPSVDS---------------------------------ILQTKESVLDKLWDINVK  123 (226)
Q Consensus        77 ~~~~~~~~~~~~~id~li~nag~~~~~~~---------------------------------~~~~~~~~~~~~~~~N~~  123 (226)
                      +++++.+.+.+|++|.+|+.-+...+..+                                 ++..+.+++..+..  ++
T Consensus       119 ~kvIe~Ik~~~g~vDlvvYSlAsp~Rk~pktgev~~SalKpIg~a~~~~~ldt~kd~i~e~~lepAseqEI~~Tv~--VM  196 (398)
T COG3007         119 QKVIEAIKQDFGKVDLVVYSLASPRRKHPKTGEVFRSALKPIGEAVSGRTLDTEKDVIIEATLEPASEQEIADTVA--VM  196 (398)
T ss_pred             HHHHHHHHHhhccccEEEEeccCccccCCCcchhhHhhhcchhhhccccccccccceeeeeecccccHHHHHHHHH--hh
Confidence            89999999999999999987554321111                                 33334444444432  22


Q ss_pred             HHHH---HHHHHhh--hhhcCCEEEEEeccCCc--CCCCCCchhhHhHHHHHHHHHHHHHHhCC
Q 027248          124 SSIL---LLQDAAP--HLQKGSSVVLISSIAGY--QPQSSMAMYGVTKTALLGLTKALAAEMAP  180 (226)
Q Consensus       124 ~~~~---~~~~~~~--~l~~~~~iv~~sS~~~~--~~~~~~~~Y~~sKaa~~~~~~~la~e~~~  180 (226)
                      |--.   .+.+++.  .+.++.+-+..|=....  ++....+.-+.+|.-++.-++.+...++.
T Consensus       197 GGeDWq~WidaLl~advlaeg~kTiAfsYiG~~iT~~IYw~GtiG~AK~DLd~~~~~inekLa~  260 (398)
T COG3007         197 GGEDWQMWIDALLEADVLAEGAKTIAFSYIGEKITHPIYWDGTIGRAKKDLDQKSLAINEKLAA  260 (398)
T ss_pred             CcchHHHHHHHHHhccccccCceEEEEEecCCccccceeeccccchhhhcHHHHHHHHHHHHHh
Confidence            3211   2223322  23344555544433332  33445667899999999999999999875

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=97.13  E-value=0.0018  Score=53.16  Aligned_cols=79  Identities=16%  Similarity=0.257  Sum_probs=58.0

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      .+.+|++++|.|| ||-+++++.+|++.|. ++.++.|+.++.+++.+.+.+.+..+..  .+..+.+..+         
T Consensus       122 ~~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~--~~~~~~~~~~---------  189 (283)
T COG0169         122 VDVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEA--AALADLEGLE---------  189 (283)
T ss_pred             cccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccc--cccccccccc---------
Confidence            3556899999985 6889999999999995 6999999999999998888765542111  1222222110         


Q ss_pred             hCCCCEEEEcCCCC
Q 027248           87 FGKIDVVVSNAAAN  100 (226)
Q Consensus        87 ~~~id~li~nag~~  100 (226)
                        ..|++||+....
T Consensus       190 --~~dliINaTp~G  201 (283)
T COG0169         190 --EADLLINATPVG  201 (283)
T ss_pred             --ccCEEEECCCCC
Confidence              579999998764

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=97.11  E-value=0.0044  Score=50.53  Aligned_cols=78  Identities=14%  Similarity=0.196  Sum_probs=53.4

Q ss_pred             EEEEcCCCchhHHHHHHHHhCC----CeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           15 AIVTASTQGIGFGIAERLGLEG----ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      +.|+|++|.+|..++..|+..|    .+|++.++++++++....++............-.++  +.++       .+..-
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~~~--d~~~-------~~~~a   71 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITD--DPYE-------AFKDA   71 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEECC--chHH-------HhCCC
Confidence            4689998899999999999998    689999999988887777665432211001111122  1111       23489


Q ss_pred             CEEEEcCCCCC
Q 027248           91 DVVVSNAAANP  101 (226)
Q Consensus        91 d~li~nag~~~  101 (226)
                      |++|..+|...
T Consensus        72 DiVv~t~~~~~   82 (263)
T cd00650          72 DVVIITAGVGR   82 (263)
T ss_pred             CEEEECCCCCC
Confidence            99999999764

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.10  E-value=0.0051  Score=52.83  Aligned_cols=81  Identities=26%  Similarity=0.326  Sum_probs=54.6

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecC-------------------cchHHHHHHHHHhcCCcEEE--E
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRK-------------------QKNVDEAVVKLKARGIEVIG--V   66 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~-------------------~~~~~~~~~~~~~~~~~~~~--~   66 (226)
                      .+++++|+|.|+ ||+|..+++.|+..|. ++.+++++                   ..+.+.+.+.+.+..+.+.+  +
T Consensus       132 ~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~  210 (376)
T PRK08762        132 RLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAV  210 (376)
T ss_pred             HHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEE
Confidence            456788998865 7999999999999997 59999998                   44566666666665554433  3


Q ss_pred             EeeCCCHHHHHHHHHHHHHHhCCCCEEEEcCC
Q 027248           67 VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAA   98 (226)
Q Consensus        67 ~~Dv~~~~~v~~~~~~~~~~~~~id~li~nag   98 (226)
                      ...++ .+.++.++       ...|++|++..
T Consensus       211 ~~~~~-~~~~~~~~-------~~~D~Vv~~~d  234 (376)
T PRK08762        211 QERVT-SDNVEALL-------QDVDVVVDGAD  234 (376)
T ss_pred             eccCC-hHHHHHHH-------hCCCEEEECCC
Confidence            22232 22333332       26888887764

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=97.10  E-value=0.0092  Score=50.13  Aligned_cols=78  Identities=15%  Similarity=0.197  Sum_probs=51.8

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCe-EEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      .|++++|+|+ |++|...++.+...|++ |+++++++++.+.+ .++   +.+.   ..|..+.+ .+.+.+ +. ....
T Consensus       163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~-~~~---ga~~---~i~~~~~~-~~~~~~-~~-~~~~  231 (339)
T cd08239         163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELA-KAL---GADF---VINSGQDD-VQEIRE-LT-SGAG  231 (339)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh---CCCE---EEcCCcch-HHHHHH-Hh-CCCC
Confidence            4899999986 89999999998899998 99998888776543 333   3222   12444333 332222 11 1126


Q ss_pred             CCEEEEcCCC
Q 027248           90 IDVVVSNAAA   99 (226)
Q Consensus        90 id~li~nag~   99 (226)
                      +|++|.+.|.
T Consensus       232 ~d~vid~~g~  241 (339)
T cd08239         232 ADVAIECSGN  241 (339)
T ss_pred             CCEEEECCCC
Confidence            9999998874

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=97.04  E-value=0.0052  Score=53.37  Aligned_cols=42  Identities=31%  Similarity=0.338  Sum_probs=36.9

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHH
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVD   50 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~   50 (226)
                      ..+.||+++|+|. |.||+.+++.+...|++|+++++++.+..
T Consensus       208 ~~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~  249 (425)
T PRK05476        208 VLIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICAL  249 (425)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhH
Confidence            3468999999997 68999999999999999999999886643

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=97.02  E-value=0.01  Score=49.60  Aligned_cols=78  Identities=18%  Similarity=0.187  Sum_probs=49.2

Q ss_pred             CCCEE-EEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh--
Q 027248           11 QGKVA-IVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF--   87 (226)
Q Consensus        11 ~gk~v-lItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--   87 (226)
                      .+..+ +++||+|++|...++.....|++|+.+++++++.+.+.+    .+.+. ++  |..+.+..    +++.+..  
T Consensus       142 ~~~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~~----~g~~~-~i--~~~~~~~~----~~v~~~~~~  210 (324)
T cd08291         142 EGAKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLKK----IGAEY-VL--NSSDPDFL----EDLKELIAK  210 (324)
T ss_pred             CCCcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----cCCcE-EE--ECCCccHH----HHHHHHhCC
Confidence            34444 445999999999988777889999999988876555432    23332 22  33333222    2233222  


Q ss_pred             CCCCEEEEcCCC
Q 027248           88 GKIDVVVSNAAA   99 (226)
Q Consensus        88 ~~id~li~nag~   99 (226)
                      ..+|+++++.|.
T Consensus       211 ~~~d~vid~~g~  222 (324)
T cd08291         211 LNATIFFDAVGG  222 (324)
T ss_pred             CCCcEEEECCCc
Confidence            269999998873

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=97.01  E-value=0.0028  Score=51.38  Aligned_cols=74  Identities=15%  Similarity=0.228  Sum_probs=53.5

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCEE
Q 027248           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVV   93 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~l   93 (226)
                      +++|+|||+- |+.+++.|.+.|++|+...+++...+....    .+  ...+..+..+.+++..++.+     ..+|+|
T Consensus         2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~----~g--~~~v~~g~l~~~~l~~~l~~-----~~i~~V   69 (256)
T TIGR00715         2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPI----HQ--ALTVHTGALDPQELREFLKR-----HSIDIL   69 (256)
T ss_pred             eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccc----cC--CceEEECCCCHHHHHHHHHh-----cCCCEE
Confidence            5899999998 999999999999999999998865433221    11  12344567777776665543     279999


Q ss_pred             EEcCCC
Q 027248           94 VSNAAA   99 (226)
Q Consensus        94 i~nag~   99 (226)
                      |+.+.-
T Consensus        70 IDAtHP   75 (256)
T TIGR00715        70 VDATHP   75 (256)
T ss_pred             EEcCCH
Confidence            987753

This enzyme was found to be a monomer by gel filtration.

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.01  E-value=0.0028  Score=52.22  Aligned_cols=40  Identities=23%  Similarity=0.244  Sum_probs=35.6

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCc
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ   46 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~   46 (226)
                      ..+++||.++|.|+++-.|++++..|.++|++|.++.|..
T Consensus       154 ~i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t  193 (283)
T PRK14192        154 NIELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRT  193 (283)
T ss_pred             CCCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCc
Confidence            3468999999999999999999999999999988888743

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.00  E-value=0.0089  Score=50.58  Aligned_cols=37  Identities=22%  Similarity=0.336  Sum_probs=32.7

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCc
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQ   46 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~   46 (226)
                      .++.++|+|.|+ ||+|..+++.|++.|. ++.+++.+.
T Consensus        21 ~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~   58 (339)
T PRK07688         21 KLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDY   58 (339)
T ss_pred             HhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCc
Confidence            466788999988 8999999999999997 699999974

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=97.00  E-value=0.01  Score=47.88  Aligned_cols=36  Identities=14%  Similarity=0.333  Sum_probs=31.7

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRK   45 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~   45 (226)
                      .+++++|+|.|+ ||+|..+++.|+..|. ++.+++.+
T Consensus        29 ~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D   65 (245)
T PRK05690         29 KLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFD   65 (245)
T ss_pred             HhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            467889999988 9999999999999996 58888776

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=96.99  E-value=0.0064  Score=53.33  Aligned_cols=42  Identities=29%  Similarity=0.283  Sum_probs=36.7

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNV   49 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~   49 (226)
                      +..+.||+++|.|.+ .||+.+++.+...|++|+++++++.+.
T Consensus       249 ~~~LaGKtVgVIG~G-~IGr~vA~rL~a~Ga~ViV~e~dp~~a  290 (476)
T PTZ00075        249 DVMIAGKTVVVCGYG-DVGKGCAQALRGFGARVVVTEIDPICA  290 (476)
T ss_pred             CCCcCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchhH
Confidence            346899999999977 599999999999999999998887654

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=96.98  E-value=0.034  Score=44.44  Aligned_cols=147  Identities=16%  Similarity=0.180  Sum_probs=80.9

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCc-------------------chHHHHHHHHHhcCCcEEE--E
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQ-------------------KNVDEAVVKLKARGIEVIG--V   66 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~~~~~~~~~~~--~   66 (226)
                      .+++++++|.|. ||+|..+++.|++.|. ++++++.+.                   .+.+...+.+.+.++.+.+  +
T Consensus         8 ~L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~   86 (231)
T cd00755           8 KLRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAV   86 (231)
T ss_pred             HHhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEe
Confidence            356678888875 6999999999999996 589988763                   2333344444444544433  3


Q ss_pred             EeeCCCHHHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEe
Q 027248           67 VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (226)
Q Consensus        67 ~~Dv~~~~~v~~~~~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~s  146 (226)
                      ...++ ++....++.      ..+|++|.+....                      ..-..+.+.+..+   +-.+|...
T Consensus        87 ~~~i~-~~~~~~l~~------~~~D~VvdaiD~~----------------------~~k~~L~~~c~~~---~ip~I~s~  134 (231)
T cd00755          87 EEFLT-PDNSEDLLG------GDPDFVVDAIDSI----------------------RAKVALIAYCRKR---KIPVISSM  134 (231)
T ss_pred             eeecC-HhHHHHHhc------CCCCEEEEcCCCH----------------------HHHHHHHHHHHHh---CCCEEEEe
Confidence            22333 233333321      2588887664321                      1111222333222   22455444


Q ss_pred             ccCCcCCCCCCchhhHhHHHHHHHHHHHHHHhCC-CeE--EEEEe
Q 027248          147 SIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTR--VNCVA  188 (226)
Q Consensus       147 S~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~-~i~--v~~v~  188 (226)
                      +.++.........-..+|.-..-|++.+++++.+ +|+  +-+|+
T Consensus       135 g~g~~~dp~~i~i~di~~t~~~pla~~~R~~Lrk~~~~~~~~~v~  179 (231)
T cd00755         135 GAGGKLDPTRIRVADISKTSGDPLARKVRKRLRKRGIFFGVPVVY  179 (231)
T ss_pred             CCcCCCCCCeEEEccEeccccCcHHHHHHHHHHHcCCCCCeEEEe
Confidence            4444332222233445566667788899999876 664  44444

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PLN02494 adenosylhomocysteinase

Probab=96.95  E-value=0.0083  Score=52.56  Aligned_cols=42  Identities=26%  Similarity=0.327  Sum_probs=36.7

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHH
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVD   50 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~   50 (226)
                      ..+.||+++|.|.+ .||+.+++.+...|++|+++++++.+..
T Consensus       250 i~LaGKtVvViGyG-~IGr~vA~~aka~Ga~VIV~e~dp~r~~  291 (477)
T PLN02494        250 VMIAGKVAVICGYG-DVGKGCAAAMKAAGARVIVTEIDPICAL  291 (477)
T ss_pred             CccCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchhhH
Confidence            34789999999976 9999999999999999999999886543

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=96.95  E-value=0.035  Score=45.33  Aligned_cols=143  Identities=13%  Similarity=0.124  Sum_probs=79.2

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCC-CeEEEEecCcch-------------------HHHHHHHHHhcCCcEEEEEe
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEG-ASVVVSSRKQKN-------------------VDEAVVKLKARGIEVIGVVC   68 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g-~~v~~~~r~~~~-------------------~~~~~~~~~~~~~~~~~~~~   68 (226)
                      .+++.+|+|.|+ ||+|..+++.|++.| -++.+++.+.-.                   .+...+.+.+..+.+.+...
T Consensus        27 kL~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i  105 (268)
T PRK15116         27 LFADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVV  105 (268)
T ss_pred             HhcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEE
Confidence            466788898875 699999999999999 569998877321                   12233334443444433222


Q ss_pred             e-CCCHHHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEec
Q 027248           69 H-VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISS  147 (226)
Q Consensus        69 D-v~~~~~v~~~~~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS  147 (226)
                      + .-+++..+.++.      ...|++|.+.....                      .-..+.+.+..   .+-.+|....
T Consensus       106 ~~~i~~e~~~~ll~------~~~D~VIdaiD~~~----------------------~k~~L~~~c~~---~~ip~I~~gG  154 (268)
T PRK15116        106 DDFITPDNVAEYMS------AGFSYVIDAIDSVR----------------------PKAALIAYCRR---NKIPLVTTGG  154 (268)
T ss_pred             ecccChhhHHHHhc------CCCCEEEEcCCCHH----------------------HHHHHHHHHHH---cCCCEEEECC
Confidence            2 223344333321      25777776655211                      11122222222   1224555555


Q ss_pred             cCCcCCCCCCchhhHhHHHHHHHHHHHHHHhCC--CeE
Q 027248          148 IAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP--DTR  183 (226)
Q Consensus       148 ~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~--~i~  183 (226)
                      ..+.........-..+|.-..-|++.+++++..  ||+
T Consensus       155 ag~k~dp~~~~~~di~~t~~~pla~~~R~~lr~~~~~~  192 (268)
T PRK15116        155 AGGQIDPTQIQVVDLAKTIQDPLAAKLRERLKSDFGVV  192 (268)
T ss_pred             cccCCCCCeEEEEeeecccCChHHHHHHHHHHHhhCCC
Confidence            544433223334556666677788888888864  553

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=96.94  E-value=0.0065  Score=45.57  Aligned_cols=42  Identities=24%  Similarity=0.267  Sum_probs=36.7

Q ss_pred             CcccccccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEe
Q 027248            1 MEKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSS   43 (226)
Q Consensus         1 ~~~~~~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~   43 (226)
                      |+.+.+..+++||.++|.|| |.+|...++.|++.|++|.+++
T Consensus         2 ~~~~P~~l~l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIs   43 (157)
T PRK06719          2 YNMYPLMFNLHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVS   43 (157)
T ss_pred             CcccceEEEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEc
Confidence            55667778999999999985 5799999999999999998885

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.93  E-value=0.0025  Score=48.34  Aligned_cols=39  Identities=26%  Similarity=0.266  Sum_probs=35.3

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCc
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ   46 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~   46 (226)
                      .++.||+++|.|++.-+|..+++.|.++|++|.++.|+.
T Consensus        40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~   78 (168)
T cd01080          40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT   78 (168)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc
Confidence            468999999999977789999999999999999999874

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.93  E-value=0.0035  Score=54.71  Aligned_cols=47  Identities=21%  Similarity=0.378  Sum_probs=40.3

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHH
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKL   56 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~   56 (226)
                      ++.|++++|.|+ |.+|+.+++.|...|+ +|++++|+.++.+...+++
T Consensus       179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~  226 (423)
T PRK00045        179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEF  226 (423)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc
Confidence            478899999987 9999999999999997 6999999988776666554

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=96.92  E-value=0.012  Score=50.89  Aligned_cols=44  Identities=32%  Similarity=0.371  Sum_probs=37.9

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHH
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEA   52 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~   52 (226)
                      ..+.|++++|.|++ .||+.+++.+...|++|+++++++.++..+
T Consensus       198 ~~l~GktVvViG~G-~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A  241 (413)
T cd00401         198 VMIAGKVAVVAGYG-DVGKGCAQSLRGQGARVIVTEVDPICALQA  241 (413)
T ss_pred             CCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECChhhHHHH
Confidence            34689999999976 799999999999999999999988776544

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=96.91  E-value=0.013  Score=48.68  Aligned_cols=78  Identities=23%  Similarity=0.321  Sum_probs=53.4

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh--C
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF--G   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--~   88 (226)
                      .|.+++|+|+++++|.++++.+...|++|+.+++++++.+.+ .++   +.+.   ..|..+.+..+.    +.+..  .
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~~~---g~~~---~~~~~~~~~~~~----~~~~~~~~  210 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-RAL---GADV---AVDYTRPDWPDQ----VREALGGG  210 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHc---CCCE---EEecCCccHHHH----HHHHcCCC
Confidence            478999999999999999999999999999999887765444 332   3221   124444333333    22222  2


Q ss_pred             CCCEEEEcCCC
Q 027248           89 KIDVVVSNAAA   99 (226)
Q Consensus        89 ~id~li~nag~   99 (226)
                      .+|+++++.|.
T Consensus       211 ~~d~vl~~~g~  221 (324)
T cd08244         211 GVTVVLDGVGG  221 (324)
T ss_pred             CceEEEECCCh
Confidence            59999988763

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=96.90  E-value=0.022  Score=48.56  Aligned_cols=75  Identities=24%  Similarity=0.309  Sum_probs=49.6

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      .|++++|.|+ |++|...++.....|++|++++.+.++.....+++   +.+..   .|..+.+.+.       +..+.+
T Consensus       183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~---Ga~~v---i~~~~~~~~~-------~~~~~~  248 (360)
T PLN02586        183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRL---GADSF---LVSTDPEKMK-------AAIGTM  248 (360)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhC---CCcEE---EcCCCHHHHH-------hhcCCC
Confidence            5889999765 89999999988889999988888776554444333   33221   1333332222       222468


Q ss_pred             CEEEEcCCC
Q 027248           91 DVVVSNAAA   99 (226)
Q Consensus        91 d~li~nag~   99 (226)
                      |++|.+.|.
T Consensus       249 D~vid~~g~  257 (360)
T PLN02586        249 DYIIDTVSA  257 (360)
T ss_pred             CEEEECCCC
Confidence            999988873

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.89  E-value=0.0042  Score=54.48  Aligned_cols=59  Identities=22%  Similarity=0.289  Sum_probs=45.0

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHH
Q 027248           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKN   78 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   78 (226)
                      .++|.|+ |.+|+++++.|.++|+.|++++++++..+...+..     .+.++.+|.++.+..++
T Consensus         2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~~-----~~~~~~gd~~~~~~l~~   60 (453)
T PRK09496          2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDRL-----DVRTVVGNGSSPDVLRE   60 (453)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhhc-----CEEEEEeCCCCHHHHHH
Confidence            4788887 99999999999999999999999988766544311     35566677777665444

>PRK08655 prephenate dehydrogenase; Provisional

Probab=96.89  E-value=0.0095  Score=52.22  Aligned_cols=39  Identities=28%  Similarity=0.321  Sum_probs=34.2

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHH
Q 027248           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEA   52 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~   52 (226)
                      ++.|+||.|++|.++++.|.+.|++|.+.+|+++.....
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~   40 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEV   40 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHH
Confidence            489999999999999999999999999999987665443

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=96.87  E-value=0.026  Score=47.80  Aligned_cols=41  Identities=22%  Similarity=0.335  Sum_probs=36.2

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHH
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEA   52 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~   52 (226)
                      .|++++|.|+ |++|...++.+...|++|+++++++++++.+
T Consensus       166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~  206 (349)
T TIGR03201       166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM  206 (349)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence            4899999999 9999999999999999999999988876544

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.86  E-value=0.0047  Score=53.78  Aligned_cols=47  Identities=19%  Similarity=0.384  Sum_probs=40.0

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCC-CeEEEEecCcchHHHHHHHH
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEG-ASVVVSSRKQKNVDEAVVKL   56 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g-~~v~~~~r~~~~~~~~~~~~   56 (226)
                      ++.|++++|.|+ |.+|+.+++.|...| .+|++++|+.++.....+++
T Consensus       177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~  224 (417)
T TIGR01035       177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKEL  224 (417)
T ss_pred             CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence            478899999997 999999999999999 67999999987766555543

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=96.85  E-value=0.016  Score=48.15  Aligned_cols=78  Identities=22%  Similarity=0.218  Sum_probs=52.6

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh--C
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF--G   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--~   88 (226)
                      .|.+++|.|+++++|.++++.....|++++.+.++.++.+.+.+ +   +.+. ++  +-.+.+.    .+++.+..  .
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~-~---g~~~-~~--~~~~~~~----~~~i~~~~~~~  207 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRA-L---GIGP-VV--STEQPGW----QDKVREAAGGA  207 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHh-c---CCCE-EE--cCCCchH----HHHHHHHhCCC
Confidence            57899999999999999999999999999999888776544432 2   3221 11  3233222    22233322  2


Q ss_pred             CCCEEEEcCCC
Q 027248           89 KIDVVVSNAAA   99 (226)
Q Consensus        89 ~id~li~nag~   99 (226)
                      .+|+++.+.|.
T Consensus       208 ~~d~v~d~~g~  218 (324)
T cd08292         208 PISVALDSVGG  218 (324)
T ss_pred             CCcEEEECCCC
Confidence            69999988774

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=96.82  E-value=0.016  Score=50.66  Aligned_cols=114  Identities=14%  Similarity=0.063  Sum_probs=73.8

Q ss_pred             EEEEEcCCCchhHHHHHHHHhC-------CC--eEEEEecCcchHHHHHHHHHhcC----CcEEEEEeeCCCHHHHHHHH
Q 027248           14 VAIVTASTQGIGFGIAERLGLE-------GA--SVVVSSRKQKNVDEAVVKLKARG----IEVIGVVCHVSNGQQRKNLI   80 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~-------g~--~v~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~   80 (226)
                      +|.|+|++|.+|.+++..|+..       |.  +++++++++++++...-++....    .++.+ ..  .+.       
T Consensus       102 KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i-~~--~~y-------  171 (444)
T PLN00112        102 NVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSI-GI--DPY-------  171 (444)
T ss_pred             EEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEE-ec--CCH-------
Confidence            6899999999999999999988       64  69999999999887777766432    11111 11  111       


Q ss_pred             HHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEecc
Q 027248           81 NQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (226)
Q Consensus        81 ~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~  148 (226)
                          +.+..-|++|..||....  +  ..+.   .+.++.|..-.-.+.+.+..+-.+++.||.+|-.
T Consensus       172 ----e~~kdaDiVVitAG~prk--p--G~tR---~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVsNP  228 (444)
T PLN00112        172 ----EVFQDAEWALLIGAKPRG--P--GMER---ADLLDINGQIFAEQGKALNEVASRNVKVIVVGNP  228 (444)
T ss_pred             ----HHhCcCCEEEECCCCCCC--C--CCCH---HHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcCCc
Confidence                123589999999997542  1  2233   4556667654444444444432335667776643

>cd08230 glucose_DH Glucose dehydrogenase

Probab=96.82  E-value=0.031  Score=47.40  Aligned_cols=99  Identities=25%  Similarity=0.365  Sum_probs=62.6

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecC---cchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRK---QKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~---~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      .|++++|+|+ |++|...++.+...|++|++++|+   +++++ ..   .+.+.+.    .|..+. .+.+     .+..
T Consensus       172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~-~~---~~~Ga~~----v~~~~~-~~~~-----~~~~  236 (355)
T cd08230         172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKAD-IV---EELGATY----VNSSKT-PVAE-----VKLV  236 (355)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHH-HH---HHcCCEE----ecCCcc-chhh-----hhhc
Confidence            6899999985 999999998888889999999984   33332 22   2234332    233332 2222     1123


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCC
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG  150 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~  150 (226)
                      +.+|++|.+.|...                          ....++..++++|+++.++...+
T Consensus       237 ~~~d~vid~~g~~~--------------------------~~~~~~~~l~~~G~~v~~G~~~~  273 (355)
T cd08230         237 GEFDLIIEATGVPP--------------------------LAFEALPALAPNGVVILFGVPGG  273 (355)
T ss_pred             CCCCEEEECcCCHH--------------------------HHHHHHHHccCCcEEEEEecCCC
Confidence            57999999987310                          12334455667888888876543

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.82  E-value=0.0024  Score=56.09  Aligned_cols=78  Identities=23%  Similarity=0.276  Sum_probs=53.6

Q ss_pred             ccCCCEEEEEcC----------------CCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCC
Q 027248            9 RFQGKVAIVTAS----------------TQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN   72 (226)
Q Consensus         9 ~~~gk~vlItGa----------------~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~   72 (226)
                      +++||++|||+|                ||-.|+++++++..+|++|.++.-... +       . ....+.++  ++..
T Consensus       253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~-~-------~-~p~~v~~i--~V~t  321 (475)
T PRK13982        253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD-L-------A-DPQGVKVI--HVES  321 (475)
T ss_pred             ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC-C-------C-CCCCceEE--EecC
Confidence            589999999986                466899999999999999988874321 1       0 11123332  4555


Q ss_pred             HHHHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 027248           73 GQQRKNLINQTIEKFGKIDVVVSNAAANP  101 (226)
Q Consensus        73 ~~~v~~~~~~~~~~~~~id~li~nag~~~  101 (226)
                      .+++.   +.+.+.+. .|++|++|++..
T Consensus       322 a~eM~---~av~~~~~-~Di~I~aAAVaD  346 (475)
T PRK13982        322 ARQML---AAVEAALP-ADIAIFAAAVAD  346 (475)
T ss_pred             HHHHH---HHHHhhCC-CCEEEEeccccc
Confidence            55544   44444443 699999999864

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.82  E-value=0.0051  Score=51.42  Aligned_cols=73  Identities=23%  Similarity=0.328  Sum_probs=52.7

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCC-CeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEG-ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      +.+++++|.|+ |.+|+.+++.|...| .+|++++|++++...+.+++.   ..       ..+.++..+.+       .
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g---~~-------~~~~~~~~~~l-------~  237 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELG---GN-------AVPLDELLELL-------N  237 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcC---Ce-------EEeHHHHHHHH-------h
Confidence            67999999987 999999999999877 569999999888777766652   21       11222222222       2


Q ss_pred             CCCEEEEcCCCC
Q 027248           89 KIDVVVSNAAAN  100 (226)
Q Consensus        89 ~id~li~nag~~  100 (226)
                      ..|++|.+.+..
T Consensus       238 ~aDvVi~at~~~  249 (311)
T cd05213         238 EADVVISATGAP  249 (311)
T ss_pred             cCCEEEECCCCC
Confidence            679999888753

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=96.82  E-value=0.0073  Score=49.82  Aligned_cols=77  Identities=14%  Similarity=0.232  Sum_probs=52.6

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh--C
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF--G   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--~   88 (226)
                      .|++++|+|+++++|.++.+.+...|++|+.+.+++++.+.+ .++   +.+.   ..+....+..+.    +.+..  +
T Consensus       139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~~---~~~~~~~~~~~~----~~~~~~~~  207 (325)
T TIGR02824       139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-EAL---GADI---AINYREEDFVEV----VKAETGGK  207 (325)
T ss_pred             CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc---CCcE---EEecCchhHHHH----HHHHcCCC
Confidence            578999999999999999999999999999999887665433 322   3221   123333333222    22222  3


Q ss_pred             CCCEEEEcCC
Q 027248           89 KIDVVVSNAA   98 (226)
Q Consensus        89 ~id~li~nag   98 (226)
                      .+|++++++|
T Consensus       208 ~~d~~i~~~~  217 (325)
T TIGR02824       208 GVDVILDIVG  217 (325)
T ss_pred             CeEEEEECCc
Confidence            6999999887

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=96.81  E-value=0.012  Score=49.03  Aligned_cols=77  Identities=25%  Similarity=0.202  Sum_probs=51.0

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      .+++++|.|+++++|.++++.....|++|+.+.+++++.+.+ .++   +.+..   .|..+. . ...+.++ . .+.+
T Consensus       146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~~v---~~~~~~-~-~~~~~~~-~-~~~~  214 (326)
T cd08289         146 EQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYL-KKL---GAKEV---IPREEL-Q-EESIKPL-E-KQRW  214 (326)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH-HHc---CCCEE---EcchhH-H-HHHHHhh-c-cCCc
Confidence            367999999999999999999999999999999988765544 233   32211   222222 1 1222222 1 2468


Q ss_pred             CEEEEcCC
Q 027248           91 DVVVSNAA   98 (226)
Q Consensus        91 d~li~nag   98 (226)
                      |+++++.|
T Consensus       215 d~vld~~g  222 (326)
T cd08289         215 AGAVDPVG  222 (326)
T ss_pred             CEEEECCc
Confidence            99998776

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.80  E-value=0.0046  Score=45.42  Aligned_cols=44  Identities=23%  Similarity=0.298  Sum_probs=38.7

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVD   50 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~   50 (226)
                      ..+++||.++|.|.+.-+|+.++..|.++|+.|.++.++...++
T Consensus        23 ~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~   66 (140)
T cd05212          23 GVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQ   66 (140)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHH
Confidence            45789999999999999999999999999999999987664443

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PLN02928 oxidoreductase family protein

Probab=96.79  E-value=0.0059  Score=51.85  Aligned_cols=39  Identities=23%  Similarity=0.371  Sum_probs=34.9

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcc
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK   47 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~   47 (226)
                      ..+.||++.|.|- |.||+++++.|...|++|+..+|+..
T Consensus       155 ~~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~~  193 (347)
T PLN02928        155 DTLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSWT  193 (347)
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCC
Confidence            3588999999986 89999999999999999999998743

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=96.79  E-value=0.016  Score=48.38  Aligned_cols=78  Identities=18%  Similarity=0.245  Sum_probs=51.8

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      .|.+++|.|+++++|.++++.....|.+|+.+.+++++.+.+ .++   +.+. +  .|..+.+ ..+.+.+..  .+.+
T Consensus       139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~~-v--~~~~~~~-~~~~~~~~~--~~~v  208 (329)
T cd08250         139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL-KSL---GCDR-P--INYKTED-LGEVLKKEY--PKGV  208 (329)
T ss_pred             CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH-HHc---CCce-E--EeCCCcc-HHHHHHHhc--CCCC
Confidence            578999999999999999998889999999998887665444 222   3221 1  2333322 222222222  1369


Q ss_pred             CEEEEcCC
Q 027248           91 DVVVSNAA   98 (226)
Q Consensus        91 d~li~nag   98 (226)
                      |+++++.|
T Consensus       209 d~v~~~~g  216 (329)
T cd08250         209 DVVYESVG  216 (329)
T ss_pred             eEEEECCc
Confidence            99998776

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.78  E-value=0.0027  Score=56.20  Aligned_cols=48  Identities=15%  Similarity=0.262  Sum_probs=40.8

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHH
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKL   56 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~   56 (226)
                      .++++|+++|+|+ ||+|++++..|.+.|++|.+.+|+.++.+...+++
T Consensus       328 ~~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~  375 (477)
T PRK09310        328 IPLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASRC  375 (477)
T ss_pred             CCcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence            3567899999996 79999999999999999999999887776665543

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=96.77  E-value=0.018  Score=49.20  Aligned_cols=77  Identities=21%  Similarity=0.265  Sum_probs=51.1

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh-C
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF-G   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-~   88 (226)
                      .|++++|+|+ |++|...++.+...|+ +|+.+++++++++.+ +++   +.+..   .|..+++    +.+++.+.. +
T Consensus       191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a-~~~---Ga~~~---i~~~~~~----~~~~i~~~~~~  258 (371)
T cd08281         191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALA-REL---GATAT---VNAGDPN----AVEQVRELTGG  258 (371)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH-HHc---CCceE---eCCCchh----HHHHHHHHhCC
Confidence            4789999985 8999999888888999 588899888776544 333   33221   2433332    223333322 3


Q ss_pred             CCCEEEEcCCC
Q 027248           89 KIDVVVSNAAA   99 (226)
Q Consensus        89 ~id~li~nag~   99 (226)
                      .+|++|.+.|.
T Consensus       259 g~d~vid~~G~  269 (371)
T cd08281         259 GVDYAFEMAGS  269 (371)
T ss_pred             CCCEEEECCCC
Confidence            69999998874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=96.77  E-value=0.021  Score=47.92  Aligned_cols=83  Identities=14%  Similarity=0.204  Sum_probs=51.6

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCH--HHHHHHHHHHHHHhC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNG--QQRKNLINQTIEKFG   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~--~~v~~~~~~~~~~~~   88 (226)
                      .|++++|.|+++++|.++++.....|++++.+.++.+..++..+.+.+.+.+.. +  +-...  .+...   .+....+
T Consensus       146 ~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~~~-~--~~~~~~~~~~~~---~i~~~~~  219 (341)
T cd08290         146 PGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLKALGADHV-L--TEEELRSLLATE---LLKSAPG  219 (341)
T ss_pred             CCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHHhcCCCEE-E--eCcccccccHHH---HHHHHcC
Confidence            589999999999999999999999999988888776432233333333333322 1  22211  02222   2222222


Q ss_pred             -CCCEEEEcCCC
Q 027248           89 -KIDVVVSNAAA   99 (226)
Q Consensus        89 -~id~li~nag~   99 (226)
                       .+|+++++.|.
T Consensus       220 ~~~d~vld~~g~  231 (341)
T cd08290         220 GRPKLALNCVGG  231 (341)
T ss_pred             CCceEEEECcCc
Confidence             68999988773

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>TIGR00537 hemK_rel_arch HemK-related putative methylase

Probab=96.76  E-value=0.068  Score=40.75  Aligned_cols=121  Identities=21%  Similarity=0.220  Sum_probs=75.1

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      ..++++++=.|++.|.   ++..+++.+.+|+.++.+++.++.+.+.+...+.++.++..|+.+..            .+
T Consensus        17 ~~~~~~vLdlG~G~G~---~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~------------~~   81 (179)
T TIGR00537        17 ELKPDDVLEIGAGTGL---VAIRLKGKGKCILTTDINPFAVKELRENAKLNNVGLDVVMTDLFKGV------------RG   81 (179)
T ss_pred             hcCCCeEEEeCCChhH---HHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCCceEEEEccccccc------------CC
Confidence            3466788989887664   45556666778999999999888877777666666777777865421            14


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHH-HHH---HHHHHHHHHHHHHhhhhhcCCEEEEEec
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDK-LWD---INVKSSILLLQDAAPHLQKGSSVVLISS  147 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~-~~~---~N~~~~~~~~~~~~~~l~~~~~iv~~sS  147 (226)
                      .+|+++.|.-.........   ..++.. .+.   .+..-.-.+++.+...|+++|+++++.+
T Consensus        82 ~fD~Vi~n~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~~~~~~~  141 (179)
T TIGR00537        82 KFDVILFNPPYLPLEDDLR---RGDWLDVAIDGGKDGRKVIDRFLDELPEILKEGGRVQLIQS  141 (179)
T ss_pred             cccEEEECCCCCCCcchhc---ccchhhhhhhcCCchHHHHHHHHHhHHHhhCCCCEEEEEEe
Confidence            7999999976543111111   111111 000   1111133456666777888898877654

The gene hemK from E. coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase (Medline 95189105). Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity (Medline 99237242). Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. This model represents an archaeal and eukaryotic protein family that lacks an N-terminal domain found in HemK and its eubacterial homologs. It is found in a single copy in the first six completed archaeal and eukaryotic genomes.

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=96.75  E-value=0.023  Score=48.74  Aligned_cols=75  Identities=25%  Similarity=0.318  Sum_probs=49.5

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      .|++++|.|+ |++|...++.....|++|++++++.++..+..+++   +.+..   .|..+.+.       +.+..+.+
T Consensus       178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~l---Ga~~~---i~~~~~~~-------v~~~~~~~  243 (375)
T PLN02178        178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRL---GADSF---LVTTDSQK-------MKEAVGTM  243 (375)
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhC---CCcEE---EcCcCHHH-------HHHhhCCC
Confidence            5889999886 89999999988889999998888765533333333   33222   23333222       22222469


Q ss_pred             CEEEEcCCC
Q 027248           91 DVVVSNAAA   99 (226)
Q Consensus        91 d~li~nag~   99 (226)
                      |+++.+.|.
T Consensus       244 D~vid~~G~  252 (375)
T PLN02178        244 DFIIDTVSA  252 (375)
T ss_pred             cEEEECCCc
Confidence            999998874

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=96.75  E-value=0.021  Score=48.03  Aligned_cols=117  Identities=14%  Similarity=0.132  Sum_probs=69.5

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCCC-------eEEEEecCc--chHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHH
Q 027248           14 VAIVTASTQGIGFGIAERLGLEGA-------SVVVSSRKQ--KNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTI   84 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (226)
                      ++.|+|++|.+|..++..|...|.       +++++++++  ++++....++......... ...++.         ...
T Consensus         5 KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~-~~~i~~---------~~~   74 (323)
T TIGR01759         5 RVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLA-GVVATT---------DPE   74 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccC-CcEEec---------ChH
Confidence            588999999999999999998883       799999965  4455555555432210000 001110         111


Q ss_pred             HHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEec
Q 027248           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISS  147 (226)
Q Consensus        85 ~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS  147 (226)
                      +....-|++|..||...  ++  ..+.   .+.+..|..-.-.+.+.+.++-.+++.++.+|-
T Consensus        75 ~~~~daDvVVitAG~~~--k~--g~tR---~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsN  130 (323)
T TIGR01759        75 EAFKDVDAALLVGAFPR--KP--GMER---ADLLSKNGKIFKEQGKALNKVAKKDVKVLVVGN  130 (323)
T ss_pred             HHhCCCCEEEEeCCCCC--CC--CCcH---HHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCC
Confidence            22348899999999854  21  2233   456666765555555555444323556666663

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=96.75  E-value=0.013  Score=49.70  Aligned_cols=77  Identities=18%  Similarity=0.217  Sum_probs=50.8

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCe-EEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh--
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF--   87 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--   87 (226)
                      .|++++|.|+ |++|...++.....|++ |+.+++++++.+.+ +++   +.+. +  .|..+++..    +++.+..  
T Consensus       176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~-~~~---Ga~~-~--i~~~~~~~~----~~i~~~~~~  243 (358)
T TIGR03451       176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWA-REF---GATH-T--VNSSGTDPV----EAIRALTGG  243 (358)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc---CCce-E--EcCCCcCHH----HHHHHHhCC
Confidence            4889999985 99999999888889985 88888888766554 232   3322 1  244333322    2233322  


Q ss_pred             CCCCEEEEcCCC
Q 027248           88 GKIDVVVSNAAA   99 (226)
Q Consensus        88 ~~id~li~nag~   99 (226)
                      ..+|++|.+.|.
T Consensus       244 ~g~d~vid~~g~  255 (358)
T TIGR03451       244 FGADVVIDAVGR  255 (358)
T ss_pred             CCCCEEEECCCC
Confidence            259999998874

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=96.74  E-value=0.0083  Score=50.14  Aligned_cols=115  Identities=14%  Similarity=0.157  Sum_probs=68.6

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCCC--eEEEEecCc--chHHHHHHHHHhc----CCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248           14 VAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQ--KNVDEAVVKLKAR----GIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g~--~v~~~~r~~--~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      ++.|+|++|.+|..++..|+..|.  +|++++|++  ++++....++.+.    +...   ....+...  +        
T Consensus         2 kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~---~i~~~~d~--~--------   68 (309)
T cd05294           2 KVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDA---EIKISSDL--S--------   68 (309)
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCc---EEEECCCH--H--------
Confidence            589999999999999999999985  499999965  4544444333321    1111   11112111  1        


Q ss_pred             HhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccC
Q 027248           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~  149 (226)
                      ....-|++|.++|....    ...+.   .+.++.|..-...+.+.+.+.. .++.++.+++..
T Consensus        69 ~l~~aDiViitag~p~~----~~~~r---~dl~~~n~~i~~~~~~~i~~~~-~~~~viv~~npv  124 (309)
T cd05294          69 DVAGSDIVIITAGVPRK----EGMSR---LDLAKKNAKIVKKYAKQIAEFA-PDTKILVVTNPV  124 (309)
T ss_pred             HhCCCCEEEEecCCCCC----CCCCH---HHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeCCch
Confidence            12489999999997531    12232   3444556555555555444432 356788777653

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=96.73  E-value=0.0048  Score=43.43  Aligned_cols=71  Identities=27%  Similarity=0.276  Sum_probs=51.6

Q ss_pred             EEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCEEE
Q 027248           15 AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVV   94 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~li   94 (226)
                      ++|.|. +.+|+.+++.|.+.+.+|++++++++..+.+.    +.+  ..++.+|.++++..+++-      ..+.+.+|
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~----~~~--~~~i~gd~~~~~~l~~a~------i~~a~~vv   67 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELR----EEG--VEVIYGDATDPEVLERAG------IEKADAVV   67 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHH----HTT--SEEEES-TTSHHHHHHTT------GGCESEEE
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHH----hcc--cccccccchhhhHHhhcC------ccccCEEE
Confidence            567777 57999999999997779999999997755543    333  568889999999866641      13677777


Q ss_pred             EcCC
Q 027248           95 SNAA   98 (226)
Q Consensus        95 ~nag   98 (226)
                      ....
T Consensus        68 ~~~~   71 (116)
T PF02254_consen   68 ILTD   71 (116)
T ss_dssp             EESS
T ss_pred             EccC
Confidence            5554

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=96.73  E-value=0.025  Score=46.84  Aligned_cols=79  Identities=16%  Similarity=0.204  Sum_probs=53.0

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh--
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF--   87 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--   87 (226)
                      ..|.+++|.|+++++|.++++.+...|++++.+.++.++.+.+ .++   +.+..   .|..+.+..+    ++.+..  
T Consensus       137 ~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~~~---~~~~~~~~~~----~~~~~~~~  205 (323)
T cd05282         137 PPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEEL-KAL---GADEV---IDSSPEDLAQ----RVKEATGG  205 (323)
T ss_pred             CCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHH-Hhc---CCCEE---ecccchhHHH----HHHHHhcC
Confidence            3578999999999999999999999999999998888765444 332   32211   1333322222    232222  


Q ss_pred             CCCCEEEEcCCC
Q 027248           88 GKIDVVVSNAAA   99 (226)
Q Consensus        88 ~~id~li~nag~   99 (226)
                      ..+|+++++.|.
T Consensus       206 ~~~d~vl~~~g~  217 (323)
T cd05282         206 AGARLALDAVGG  217 (323)
T ss_pred             CCceEEEECCCC
Confidence            369999988873

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.72  E-value=0.0094  Score=49.21  Aligned_cols=80  Identities=19%  Similarity=0.312  Sum_probs=52.9

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      .+++++|+|+++++|.++++.+...|++++.++++.++.+.+ .++   +.+. ++  |....+..+.+.+.. . ...+
T Consensus       144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~---g~~~-~~--~~~~~~~~~~~~~~~-~-~~~~  214 (328)
T cd08268         144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL-LAL---GAAH-VI--VTDEEDLVAEVLRIT-G-GKGV  214 (328)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc---CCCE-EE--ecCCccHHHHHHHHh-C-CCCc
Confidence            578999999999999999999999999999999987665544 222   3211 22  332222222222211 1 1269


Q ss_pred             CEEEEcCCC
Q 027248           91 DVVVSNAAA   99 (226)
Q Consensus        91 d~li~nag~   99 (226)
                      |+++++.|.
T Consensus       215 d~vi~~~~~  223 (328)
T cd08268         215 DVVFDPVGG  223 (328)
T ss_pred             eEEEECCch
Confidence            999998874

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.71  E-value=0.015  Score=45.43  Aligned_cols=41  Identities=20%  Similarity=0.125  Sum_probs=36.0

Q ss_pred             ccccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCc
Q 027248            5 KMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ   46 (226)
Q Consensus         5 ~~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~   46 (226)
                      ....+++||.++|.|| |.+|...++.|.+.|++|+++++..
T Consensus         3 Pl~l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~   43 (202)
T PRK06718          3 PLMIDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL   43 (202)
T ss_pred             ceEEEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence            4456789999999998 8999999999999999999998754

>PRK04148 hypothetical protein; Provisional

Probab=96.71  E-value=0.0044  Score=44.99  Aligned_cols=56  Identities=21%  Similarity=0.208  Sum_probs=44.0

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHH
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQ   74 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~   74 (226)
                      +++.+++.|.+  .|.++++.|.+.|++|+.++.++...+.+.+.      ...++..|+.+++
T Consensus        16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~------~~~~v~dDlf~p~   71 (134)
T PRK04148         16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKKL------GLNAFVDDLFNPN   71 (134)
T ss_pred             cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHh------CCeEEECcCCCCC
Confidence            46789999987  88889999999999999999999865554332      2456777887654

>PLN00203 glutamyl-tRNA reductase

Probab=96.70  E-value=0.007  Score=54.03  Aligned_cols=47  Identities=17%  Similarity=0.238  Sum_probs=41.6

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHH
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKL   56 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~   56 (226)
                      ++.+++++|.|+ |++|+.+++.|...|+ +|+++.|+.++.+.+.+++
T Consensus       263 ~l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~  310 (519)
T PLN00203        263 SHASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEF  310 (519)
T ss_pred             CCCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHh
Confidence            378999999998 9999999999999997 5999999998887776655

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=96.69  E-value=0.015  Score=45.40  Aligned_cols=36  Identities=22%  Similarity=0.435  Sum_probs=29.7

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCe-EEEEecC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRK   45 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~-v~~~~r~   45 (226)
                      .+++++|+|.|+ ||+|.++++.|+..|.. +.+++.+
T Consensus        18 ~L~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d   54 (197)
T cd01492          18 RLRSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDR   54 (197)
T ss_pred             HHHhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECC
Confidence            356788999975 55999999999999975 8888766

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=96.68  E-value=0.0079  Score=47.88  Aligned_cols=74  Identities=20%  Similarity=0.285  Sum_probs=54.5

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCEE
Q 027248           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVV   93 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~l   93 (226)
                      .++|.| .|-+|+.+|+.|.+.|++|+++++++++.++..+.-    .....+.+|-++++.++++--      ...|++
T Consensus         2 ~iiIiG-~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~----~~~~~v~gd~t~~~~L~~agi------~~aD~v   70 (225)
T COG0569           2 KIIIIG-AGRVGRSVARELSEEGHNVVLIDRDEERVEEFLADE----LDTHVVIGDATDEDVLEEAGI------DDADAV   70 (225)
T ss_pred             EEEEEC-CcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhh----cceEEEEecCCCHHHHHhcCC------CcCCEE
Confidence            355555 568999999999999999999999998877644321    246778889998887665411      267777


Q ss_pred             EEcCC
Q 027248           94 VSNAA   98 (226)
Q Consensus        94 i~nag   98 (226)
                      |...|
T Consensus        71 va~t~   75 (225)
T COG0569          71 VAATG   75 (225)
T ss_pred             EEeeC
Confidence            75554

>PRK14967 putative methyltransferase; Provisional

Probab=96.66  E-value=0.052  Score=43.04  Aligned_cols=123  Identities=23%  Similarity=0.254  Sum_probs=71.2

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      .+.+++-.|++.|.   ++..+++.|. +|+.++.+++.++...+.+...+.++.++..|+.+.      +     ..+.
T Consensus        36 ~~~~vLDlGcG~G~---~~~~la~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~d~~~~------~-----~~~~  101 (223)
T PRK14967         36 PGRRVLDLCTGSGA---LAVAAAAAGAGSVTAVDISRRAVRSARLNALLAGVDVDVRRGDWARA------V-----EFRP  101 (223)
T ss_pred             CCCeEEEecCCHHH---HHHHHHHcCCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEECchhhh------c-----cCCC
Confidence            46789999987644   3334445565 899999999887776666555455566666665431      1     1248


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHH---HHHHHHHHHHHHhhhhhcCCEEEEEeccC
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDI---NVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~---N~~~~~~~~~~~~~~l~~~~~iv~~sS~~  149 (226)
                      +|++|.|..+... ... ..........+..   .....-.+++.+...++++|+++++.+..
T Consensus       102 fD~Vi~npPy~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~~~~~  162 (223)
T PRK14967        102 FDVVVSNPPYVPA-PPD-APPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLVQSEL  162 (223)
T ss_pred             eeEEEECCCCCCC-Ccc-cccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence            9999999876431 110 0000000111110   01112345566677788899988876654

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=96.66  E-value=0.011  Score=46.92  Aligned_cols=77  Identities=21%  Similarity=0.222  Sum_probs=58.9

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      .++.|+++|=.|++||   -+++.+++.|++|..++-+++.++.+.....+.+..+.+          ....++++.+..
T Consensus        56 ~~l~g~~vLDvGCGgG---~Lse~mAr~Ga~VtgiD~se~~I~~Ak~ha~e~gv~i~y----------~~~~~edl~~~~  122 (243)
T COG2227          56 FDLPGLRVLDVGCGGG---ILSEPLARLGASVTGIDASEKPIEVAKLHALESGVNIDY----------RQATVEDLASAG  122 (243)
T ss_pred             cCCCCCeEEEecCCcc---HhhHHHHHCCCeeEEecCChHHHHHHHHhhhhccccccc----------hhhhHHHHHhcC
Confidence            3478999999999998   689999999999999999999998887776665544222          223444555555


Q ss_pred             CCCCEEEEcC
Q 027248           88 GKIDVVVSNA   97 (226)
Q Consensus        88 ~~id~li~na   97 (226)
                      +++|+|+|.-
T Consensus       123 ~~FDvV~cmE  132 (243)
T COG2227         123 GQFDVVTCME  132 (243)
T ss_pred             CCccEEEEhh
Confidence            7999998654

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=96.65  E-value=0.0029  Score=40.86  Aligned_cols=35  Identities=29%  Similarity=0.434  Sum_probs=22.7

Q ss_pred             cCC-CEEEEEcCCCchhHH--HHHHHHhCCCeEEEEecC
Q 027248           10 FQG-KVAIVTASTQGIGFG--IAERLGLEGASVVVSSRK   45 (226)
Q Consensus        10 ~~g-k~vlItGa~~giG~a--~~~~l~~~g~~v~~~~r~   45 (226)
                      +.| |++||+|+|+|.|++  ++..| ..|++.+-+...
T Consensus        36 ~~GpK~VLViGaStGyGLAsRIa~aF-g~gA~TiGV~fE   73 (78)
T PF12242_consen   36 INGPKKVLVIGASTGYGLASRIAAAF-GAGADTIGVSFE   73 (78)
T ss_dssp             -TS-SEEEEES-SSHHHHHHHHHHHH-CC--EEEEEE--
T ss_pred             CCCCceEEEEecCCcccHHHHHHHHh-cCCCCEEEEeec
Confidence            344 999999999999999  55555 667776665543

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=96.63  E-value=0.029  Score=47.41  Aligned_cols=101  Identities=21%  Similarity=0.264  Sum_probs=64.7

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh--
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF--   87 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--   87 (226)
                      .|++++|+|+ +++|...++.+...|+ +|+++++++++.+.+ .++   +.+..   .|..+.+.    .+++.+..  
T Consensus       172 ~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~-~~~---ga~~~---i~~~~~~~----~~~l~~~~~~  239 (351)
T cd08233         172 PGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELA-EEL---GATIV---LDPTEVDV----VAEVRKLTGG  239 (351)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh---CCCEE---ECCCccCH----HHHHHHHhCC
Confidence            5789999985 8999999999999999 788888887765544 233   33221   24444332    22333332  


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccC
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~  149 (226)
                      +.+|+++.+.|...                          ..+.++..++.+|+++.++...
T Consensus       240 ~~~d~vid~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~~  275 (351)
T cd08233         240 GGVDVSFDCAGVQA--------------------------TLDTAIDALRPRGTAVNVAIWE  275 (351)
T ss_pred             CCCCEEEECCCCHH--------------------------HHHHHHHhccCCCEEEEEccCC
Confidence            24999999987410                          1233344456678888887643

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=96.63  E-value=0.033  Score=43.95  Aligned_cols=106  Identities=16%  Similarity=0.114  Sum_probs=68.8

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHh-------------cCCcEEEEEeeCCCHHHHH
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA-------------RGIEVIGVVCHVSNGQQRK   77 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-------------~~~~~~~~~~Dv~~~~~v~   77 (226)
                      .+.+||+.|++.|   .-+..|+++|++|+.++.++..++.+.++...             .+.++.++.+|+.+.+.  
T Consensus        34 ~~~rvLd~GCG~G---~da~~LA~~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~--  108 (213)
T TIGR03840        34 AGARVFVPLCGKS---LDLAWLAEQGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTA--  108 (213)
T ss_pred             CCCeEEEeCCCch---hHHHHHHhCCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCc--
Confidence            5679999998876   46777889999999999999888865432211             13457788889877542  


Q ss_pred             HHHHHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEe
Q 027248           78 NLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (226)
Q Consensus        78 ~~~~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~s  146 (226)
                             +..+.+|.++..+....       ++.+....           .++.+...++.+|.+++++
T Consensus       109 -------~~~~~fD~i~D~~~~~~-------l~~~~R~~-----------~~~~l~~lLkpgG~~ll~~  152 (213)
T TIGR03840       109 -------ADLGPVDAVYDRAALIA-------LPEEMRQR-----------YAAHLLALLPPGARQLLIT  152 (213)
T ss_pred             -------ccCCCcCEEEechhhcc-------CCHHHHHH-----------HHHHHHHHcCCCCeEEEEE
Confidence                   01246788876654432       23333222           2455666667788755554

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=96.63  E-value=0.004  Score=48.87  Aligned_cols=61  Identities=15%  Similarity=0.223  Sum_probs=42.7

Q ss_pred             cccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCC
Q 027248            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS   71 (226)
Q Consensus         6 ~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~   71 (226)
                      +..+++||.++|.|| |.+|..-++.|++.|++|++++....   ....++.+.+ ++..+.-+..
T Consensus         3 ~~l~l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~---~~l~~l~~~~-~i~~~~~~~~   63 (205)
T TIGR01470         3 VFANLEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELE---SELTLLAEQG-GITWLARCFD   63 (205)
T ss_pred             eEEEcCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCC---HHHHHHHHcC-CEEEEeCCCC
Confidence            456789999999985 57899999999999999999887654   1222233322 4555554544

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.62  E-value=0.025  Score=48.19  Aligned_cols=80  Identities=14%  Similarity=0.135  Sum_probs=52.5

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCc-------------------chHHHHHHHHHhcCCcEE--EE
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQ-------------------KNVDEAVVKLKARGIEVI--GV   66 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~~~~~~~~~~--~~   66 (226)
                      .+++++|+|.|+ ||+|..+++.|+..|. ++.+++.+.                   .+.+.+.+.+.+..+.+.  .+
T Consensus        25 ~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~  103 (355)
T PRK05597         25 SLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVS  103 (355)
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEE
Confidence            467789999987 7999999999999996 489988874                   344555566665555443  33


Q ss_pred             EeeCCCHHHHHHHHHHHHHHhCCCCEEEEcC
Q 027248           67 VCHVSNGQQRKNLINQTIEKFGKIDVVVSNA   97 (226)
Q Consensus        67 ~~Dv~~~~~v~~~~~~~~~~~~~id~li~na   97 (226)
                      ...++. +...+++       ...|++|.+.
T Consensus       104 ~~~i~~-~~~~~~~-------~~~DvVvd~~  126 (355)
T PRK05597        104 VRRLTW-SNALDEL-------RDADVILDGS  126 (355)
T ss_pred             EeecCH-HHHHHHH-------hCCCEEEECC
Confidence            344443 2222222       2566666554

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=96.62  E-value=0.03  Score=45.90  Aligned_cols=78  Identities=18%  Similarity=0.277  Sum_probs=51.9

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh--C
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF--G   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--~   88 (226)
                      +|++++|.|+++++|.++++.....|++|+.+.+++++.+.+ .++   +.+. ++  +..+.+.    .+.+.+..  .
T Consensus       136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~~-~~--~~~~~~~----~~~~~~~~~~~  204 (320)
T cd05286         136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELA-RAA---GADH-VI--NYRDEDF----VERVREITGGR  204 (320)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHC---CCCE-EE--eCCchhH----HHHHHHHcCCC
Confidence            588999999999999999999999999999998887765544 222   3221 11  2222222    22233222  2


Q ss_pred             CCCEEEEcCCC
Q 027248           89 KIDVVVSNAAA   99 (226)
Q Consensus        89 ~id~li~nag~   99 (226)
                      .+|+++++.|.
T Consensus       205 ~~d~vl~~~~~  215 (320)
T cd05286         205 GVDVVYDGVGK  215 (320)
T ss_pred             CeeEEEECCCc
Confidence            69999988763

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.61  E-value=0.034  Score=48.82  Aligned_cols=77  Identities=18%  Similarity=0.192  Sum_probs=50.9

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      +.+|+++|+|.+ +.|.++++.|+++|++|.+.+..+...  ...++.+....+.+..... +..    .       ...
T Consensus         3 ~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~~~--~~~~l~~~~~gi~~~~g~~-~~~----~-------~~~   67 (445)
T PRK04308          3 FQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELKPE--RVAQIGKMFDGLVFYTGRL-KDA----L-------DNG   67 (445)
T ss_pred             CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCch--hHHHHhhccCCcEEEeCCC-CHH----H-------HhC
Confidence            568999999986 999999999999999999998776531  1223332111233322221 111    1       137


Q ss_pred             CCEEEEcCCCCC
Q 027248           90 IDVVVSNAAANP  101 (226)
Q Consensus        90 id~li~nag~~~  101 (226)
                      .|.||..+|+..
T Consensus        68 ~d~vv~spgi~~   79 (445)
T PRK04308         68 FDILALSPGISE   79 (445)
T ss_pred             CCEEEECCCCCC
Confidence            899999999864

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=96.60  E-value=0.035  Score=47.73  Aligned_cols=42  Identities=14%  Similarity=0.219  Sum_probs=36.3

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHH
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEA   52 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~   52 (226)
                      .|.+++|+|+++++|.+.+......|++++.+.+++++.+.+
T Consensus       193 ~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~  234 (393)
T cd08246         193 PGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYC  234 (393)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Confidence            478999999999999999988888999988888877766544

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>PTZ00117 malate dehydrogenase; Provisional

Probab=96.60  E-value=0.024  Score=47.60  Aligned_cols=118  Identities=16%  Similarity=0.186  Sum_probs=67.2

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCC-CeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEG-ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      +.+++.|+|+ |.+|..++..++..| .++++++++++.++...-++.... ........++...+.+        .+..
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~-~~~~~~~~i~~~~d~~--------~l~~   73 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFS-TLVGSNINILGTNNYE--------DIKD   73 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhc-cccCCCeEEEeCCCHH--------HhCC
Confidence            4568999997 889999999999988 789999999877553332222211 1000001111001111        1237


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhh---cCCEEEEEeccC
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ---KGSSVVLISSIA  149 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~---~~~~iv~~sS~~  149 (226)
                      -|++|..+|....  +  ..+.   .+.+..|.    .+.+.+.+.+.   .++.++++|...
T Consensus        74 ADiVVitag~~~~--~--g~~r---~dll~~n~----~i~~~i~~~i~~~~p~a~vivvsNP~  125 (319)
T PTZ00117         74 SDVVVITAGVQRK--E--EMTR---EDLLTING----KIMKSVAESVKKYCPNAFVICVTNPL  125 (319)
T ss_pred             CCEEEECCCCCCC--C--CCCH---HHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecChH
Confidence            8999999997542  1  1222   33445565    34444444443   245677776544

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=96.57  E-value=0.016  Score=47.53  Aligned_cols=100  Identities=18%  Similarity=0.239  Sum_probs=60.6

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCe-EEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      .|++++|.|+ |++|...++.+...|++ |+++++++++++.+ +++   +.+..+   |..+.   .+.+.++. ....
T Consensus       120 ~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~a-~~~---Ga~~~i---~~~~~---~~~~~~~~-~~~g  187 (280)
T TIGR03366       120 KGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRRELA-LSF---GATALA---EPEVL---AERQGGLQ-NGRG  187 (280)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHc---CCcEec---Cchhh---HHHHHHHh-CCCC
Confidence            6889999986 89999999988889987 88887777665332 222   332211   22211   11111111 1125


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEecc
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~  148 (226)
                      +|++|.+.|...                          ..+.++..++++|+++.++..
T Consensus       188 ~d~vid~~G~~~--------------------------~~~~~~~~l~~~G~iv~~G~~  220 (280)
T TIGR03366       188 VDVALEFSGATA--------------------------AVRACLESLDVGGTAVLAGSV  220 (280)
T ss_pred             CCEEEECCCChH--------------------------HHHHHHHHhcCCCEEEEeccC
Confidence            999999887411                          122334445678899988864

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=96.56  E-value=0.013  Score=56.24  Aligned_cols=78  Identities=23%  Similarity=0.219  Sum_probs=60.3

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCC-Ce-------------EEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHH
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEG-AS-------------VVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQ   75 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g-~~-------------v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   75 (226)
                      .+.|.|+|.|+ |.+|+..++.|++.+ ++             |.+.+++.+..+.+.+..    .++..+..|++|.++
T Consensus       567 ~~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~----~~~~~v~lDv~D~e~  641 (1042)
T PLN02819        567 KKSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGI----ENAEAVQLDVSDSES  641 (1042)
T ss_pred             ccCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhc----CCCceEEeecCCHHH
Confidence            34689999997 999999999998763 33             788888887766655543    245678899999988


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCC
Q 027248           76 RKNLINQTIEKFGKIDVVVSNAAA   99 (226)
Q Consensus        76 v~~~~~~~~~~~~~id~li~nag~   99 (226)
                      +.++++       .+|+||++...
T Consensus       642 L~~~v~-------~~DaVIsalP~  658 (1042)
T PLN02819        642 LLKYVS-------QVDVVISLLPA  658 (1042)
T ss_pred             HHHhhc-------CCCEEEECCCc
Confidence            766655       69999988765

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.54  E-value=0.028  Score=44.34  Aligned_cols=36  Identities=17%  Similarity=0.267  Sum_probs=31.6

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCe-EEEEecC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRK   45 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~-v~~~~r~   45 (226)
                      .+++++|+|.|+ ||+|..+++.|++.|.. +.+++.+
T Consensus        25 ~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         25 KLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             HHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            456788999985 89999999999999975 9999988

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.54  E-value=0.012  Score=48.75  Aligned_cols=80  Identities=21%  Similarity=0.182  Sum_probs=56.6

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      .+++||.++|.|.++-+|+.++..|.++|+.|.+..|....+++..++     .++  +..=+.++..++...       
T Consensus       155 i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~~~~-----ADI--VIsavg~~~~v~~~~-------  220 (301)
T PRK14194        155 GDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKALCRQ-----ADI--VVAAVGRPRLIDADW-------  220 (301)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHHHhc-----CCE--EEEecCChhcccHhh-------
Confidence            478999999999999999999999999999999998877655443322     233  334455555544433       


Q ss_pred             CCCCEEEEcCCCCC
Q 027248           88 GKIDVVVSNAAANP  101 (226)
Q Consensus        88 ~~id~li~nag~~~  101 (226)
                      -+...+|...|+..
T Consensus       221 ik~GaiVIDvgin~  234 (301)
T PRK14194        221 LKPGAVVIDVGINR  234 (301)
T ss_pred             ccCCcEEEEecccc
Confidence            14556666677654

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=96.52  E-value=0.038  Score=45.94  Aligned_cols=78  Identities=14%  Similarity=0.242  Sum_probs=52.0

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh--C
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF--G   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--~   88 (226)
                      .|.+++|.|+++++|.++++.+...|++++++.+++++.+.+ .+   .+.+. +  .|..+.+.   +.+++.+..  .
T Consensus       140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~---~g~~~-~--~~~~~~~~---~~~~~~~~~~~~  209 (334)
T PTZ00354        140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFC-KK---LAAII-L--IRYPDEEG---FAPKVKKLTGEK  209 (334)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HH---cCCcE-E--EecCChhH---HHHHHHHHhCCC
Confidence            578999999999999999999999999988888887665554 22   23221 1  23333221   223333322  3


Q ss_pred             CCCEEEEcCC
Q 027248           89 KIDVVVSNAA   98 (226)
Q Consensus        89 ~id~li~nag   98 (226)
                      .+|+++++.|
T Consensus       210 ~~d~~i~~~~  219 (334)
T PTZ00354        210 GVNLVLDCVG  219 (334)
T ss_pred             CceEEEECCc
Confidence            6999998876

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=96.51  E-value=0.032  Score=44.45  Aligned_cols=81  Identities=17%  Similarity=0.277  Sum_probs=53.3

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCc-------------------chHHHHHHHHHhcCCc--EEEE
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQ-------------------KNVDEAVVKLKARGIE--VIGV   66 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~~~~~~~~--~~~~   66 (226)
                      .+.+++|+|.| .||+|.++++.|+..|. ++.++|.+.                   .+.+.+.+.+.+..+.  +..+
T Consensus        18 ~L~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~   96 (228)
T cd00757          18 KLKNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAY   96 (228)
T ss_pred             HHhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence            45678899998 67999999999999996 488876542                   3444555566655554  3444


Q ss_pred             EeeCCCHHHHHHHHHHHHHHhCCCCEEEEcCC
Q 027248           67 VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAA   98 (226)
Q Consensus        67 ~~Dv~~~~~v~~~~~~~~~~~~~id~li~nag   98 (226)
                      ..+++ .+.+.+++       ...|++|.+..
T Consensus        97 ~~~i~-~~~~~~~~-------~~~DvVi~~~d  120 (228)
T cd00757          97 NERLD-AENAEELI-------AGYDLVLDCTD  120 (228)
T ss_pred             cceeC-HHHHHHHH-------hCCCEEEEcCC
Confidence            44442 23333332       36899987764

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=96.50  E-value=0.032  Score=45.85  Aligned_cols=105  Identities=16%  Similarity=0.265  Sum_probs=71.2

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHh-CCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGL-EGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~-~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      +|++++|.||+|.+|.-. -||++ .|+.|+..+-+.++..-...++.   .+..   .|--++..+.+++++...  ..
T Consensus       153 ~geTv~VSaAsGAvGql~-GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G---~d~a---fNYK~e~~~~~aL~r~~P--~G  223 (343)
T KOG1196|consen  153 KGETVFVSAASGAVGQLV-GQFAKLMGCYVVGSAGSKEKVDLLKTKFG---FDDA---FNYKEESDLSAALKRCFP--EG  223 (343)
T ss_pred             CCCEEEEeeccchhHHHH-HHHHHhcCCEEEEecCChhhhhhhHhccC---Cccc---eeccCccCHHHHHHHhCC--Cc
Confidence            589999999999999754 45554 69999998888888766665542   2111   244444455555554322  38


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCc
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY  151 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~  151 (226)
                      +|+.+-|.|..                           +..+.+..|+..|||+..+-.+.+
T Consensus       224 IDiYfeNVGG~---------------------------~lDavl~nM~~~gri~~CG~ISqY  258 (343)
T KOG1196|consen  224 IDIYFENVGGK---------------------------MLDAVLLNMNLHGRIAVCGMISQY  258 (343)
T ss_pred             ceEEEeccCcH---------------------------HHHHHHHhhhhccceEeeeeehhc
Confidence            99999999962                           234556667778898887765544

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=96.50  E-value=0.056  Score=45.43  Aligned_cols=75  Identities=24%  Similarity=0.334  Sum_probs=49.2

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      .|.+++|+|+++++|.++++.....|++|+.+.++ ++. ...+++   +.+.   ..|..+.+..+.    +.. .+.+
T Consensus       162 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~~-~~~~~~---g~~~---~~~~~~~~~~~~----l~~-~~~v  228 (350)
T cd08248         162 AGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DAI-PLVKSL---GADD---VIDYNNEDFEEE----LTE-RGKF  228 (350)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-chH-HHHHHh---CCce---EEECCChhHHHH----HHh-cCCC
Confidence            48999999999999999999999999998877764 222 222322   3221   224444333322    222 2579


Q ss_pred             CEEEEcCC
Q 027248           91 DVVVSNAA   98 (226)
Q Consensus        91 d~li~nag   98 (226)
                      |+++++.|
T Consensus       229 d~vi~~~g  236 (350)
T cd08248         229 DVILDTVG  236 (350)
T ss_pred             CEEEECCC
Confidence            99998877

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=96.49  E-value=0.046  Score=46.37  Aligned_cols=80  Identities=16%  Similarity=0.237  Sum_probs=50.1

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh--
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF--   87 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--   87 (226)
                      .|++++|+| ++++|.++++.+...|+ +|+++++++++.+.+ +++   +.+. ++  |..+... ..+.+.+.+..  
T Consensus       177 ~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~-~~~---g~~~-vi--~~~~~~~-~~~~~~i~~~~~~  247 (361)
T cd08231         177 AGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLELA-REF---GADA-TI--DIDELPD-PQRRAIVRDITGG  247 (361)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc---CCCe-EE--cCccccc-HHHHHHHHHHhCC
Confidence            688999997 59999999998888999 899998877665433 222   3222 11  2222111 11112233322  


Q ss_pred             CCCCEEEEcCCC
Q 027248           88 GKIDVVVSNAAA   99 (226)
Q Consensus        88 ~~id~li~nag~   99 (226)
                      ..+|+++++.|.
T Consensus       248 ~~~d~vid~~g~  259 (361)
T cd08231         248 RGADVVIEASGH  259 (361)
T ss_pred             CCCcEEEECCCC
Confidence            369999998874

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=96.47  E-value=0.03  Score=48.15  Aligned_cols=118  Identities=14%  Similarity=0.066  Sum_probs=70.9

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCC-Ce----EEE----EecCcchHHHHHHHHHhcC-CcEEEEEeeCCCHHHHHHHHHH
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEG-AS----VVV----SSRKQKNVDEAVVKLKARG-IEVIGVVCHVSNGQQRKNLINQ   82 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g-~~----v~~----~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~   82 (226)
                      -+|.|+|++|.+|.+++-.|+..| +.    +.+    +++++++++...-++.... +...  ..-++..+        
T Consensus        45 ~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~--~v~i~~~~--------  114 (387)
T TIGR01757        45 VNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLR--EVSIGIDP--------  114 (387)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcC--ceEEecCC--------
Confidence            379999999999999999999887 33    444    4888888877766665432 1100  01111100        


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEecc
Q 027248           83 TIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (226)
Q Consensus        83 ~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~  148 (226)
                       .+.+..-|++|..||...  ++  ..+.   .+.+..|..-.-.+.+.+..+-.+++.|+.+|-.
T Consensus       115 -y~~~kdaDIVVitAG~pr--kp--g~tR---~dll~~N~~I~k~i~~~I~~~a~~~~iviVVsNP  172 (387)
T TIGR01757       115 -YEVFEDADWALLIGAKPR--GP--GMER---ADLLDINGQIFADQGKALNAVASKNCKVLVVGNP  172 (387)
T ss_pred             -HHHhCCCCEEEECCCCCC--CC--CCCH---HHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCc
Confidence             122358999999999854  22  2233   4566667654444444444443345667777643

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=96.45  E-value=0.038  Score=46.21  Aligned_cols=42  Identities=19%  Similarity=0.335  Sum_probs=37.3

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHH
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEA   52 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~   52 (226)
                      .|.+++|.|+++.+|.++++.+...|++++.++++.++.+.+
T Consensus       162 ~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~  203 (334)
T PRK13771        162 KGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIV  203 (334)
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            478999999999999999999999999999999988776554

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=96.44  E-value=0.068  Score=44.82  Aligned_cols=75  Identities=23%  Similarity=0.243  Sum_probs=49.9

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      .|++++|.| ++++|.+++..+...|++|+.+++++++.+.+ +++   +.+. +  .|....+ ..+   .+.+. +.+
T Consensus       163 ~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~-~~~---g~~~-~--i~~~~~~-~~~---~~~~~-~~~  229 (333)
T cd08296         163 PGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADLA-RKL---GAHH-Y--IDTSKED-VAE---ALQEL-GGA  229 (333)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHHH-HHc---CCcE-E--ecCCCcc-HHH---HHHhc-CCC
Confidence            478999999 79999999998889999999999987765544 333   3221 1  1333222 222   22221 468


Q ss_pred             CEEEEcCC
Q 027248           91 DVVVSNAA   98 (226)
Q Consensus        91 d~li~nag   98 (226)
                      |+++.+.|
T Consensus       230 d~vi~~~g  237 (333)
T cd08296         230 KLILATAP  237 (333)
T ss_pred             CEEEECCC
Confidence            99998765

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.44  E-value=0.026  Score=46.77  Aligned_cols=79  Identities=19%  Similarity=0.151  Sum_probs=54.8

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEe-cCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSS-RKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      .+++||+++|.|.++-+|+.++..|+++|+.|.++. |+. .+++..+       +..++.+=+.+++.++...      
T Consensus       154 i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~-~l~e~~~-------~ADIVIsavg~~~~v~~~~------  219 (296)
T PRK14188        154 GDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR-DLPAVCR-------RADILVAAVGRPEMVKGDW------  219 (296)
T ss_pred             CCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC-CHHHHHh-------cCCEEEEecCChhhcchhe------
Confidence            468999999999999999999999999999999995 554 3322221       1223444566666554433      


Q ss_pred             hCCCCEEEEcCCCCC
Q 027248           87 FGKIDVVVSNAAANP  101 (226)
Q Consensus        87 ~~~id~li~nag~~~  101 (226)
                       -+...+|...|+..
T Consensus       220 -lk~GavVIDvGin~  233 (296)
T PRK14188        220 -IKPGATVIDVGINR  233 (296)
T ss_pred             -ecCCCEEEEcCCcc
Confidence             14556666777754

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=96.44  E-value=0.089  Score=44.04  Aligned_cols=115  Identities=12%  Similarity=0.084  Sum_probs=70.8

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCC--CeEEEEecCcchHHHHHHHHHhcCC---cEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEG--ASVVVSSRKQKNVDEAVVKLKARGI---EVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      ..+.|+|+ |.+|..++..|+..|  .++++++.+++.++....++....+   ...+...  .+.+           .+
T Consensus         4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~dy~-----------~~   69 (312)
T cd05293           4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KDYS-----------VT   69 (312)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CCHH-----------Hh
Confidence            46889996 999999999999887  3599999999877776666654321   1111110  1211           12


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccC
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~  149 (226)
                      ...|++|..||....  +  ..+.   .+.+..|..-...+.+.+..+ ..++.++++|...
T Consensus        70 ~~adivvitaG~~~k--~--g~~R---~dll~~N~~i~~~~~~~i~~~-~p~~~vivvsNP~  123 (312)
T cd05293          70 ANSKVVIVTAGARQN--E--GESR---LDLVQRNVDIFKGIIPKLVKY-SPNAILLVVSNPV  123 (312)
T ss_pred             CCCCEEEECCCCCCC--C--CCCH---HHHHHHHHHHHHHHHHHHHHh-CCCcEEEEccChH
Confidence            488999999997642  1  2333   334555654444444444333 2356777777543

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=96.43  E-value=0.028  Score=47.99  Aligned_cols=79  Identities=16%  Similarity=0.272  Sum_probs=51.9

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCC-HHHHHHHHHHHHHHhC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN-GQQRKNLINQTIEKFG   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~~   88 (226)
                      .|.+++|+|+ |++|...++.....|+ +|+.+++++++++.+ .++   +.+..   .|..+ .+.+.+.+.++..  +
T Consensus       185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a-~~~---Ga~~~---i~~~~~~~~~~~~v~~~~~--~  254 (368)
T TIGR02818       185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELA-KKL---GATDC---VNPNDYDKPIQEVIVEITD--G  254 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh---CCCeE---EcccccchhHHHHHHHHhC--C
Confidence            4889999985 8999999988888998 699999988776554 333   33221   23332 2222222222221  3


Q ss_pred             CCCEEEEcCCC
Q 027248           89 KIDVVVSNAAA   99 (226)
Q Consensus        89 ~id~li~nag~   99 (226)
                      .+|++|.+.|.
T Consensus       255 g~d~vid~~G~  265 (368)
T TIGR02818       255 GVDYSFECIGN  265 (368)
T ss_pred             CCCEEEECCCC
Confidence            79999999884

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=96.43  E-value=0.038  Score=43.07  Aligned_cols=35  Identities=17%  Similarity=0.398  Sum_probs=29.5

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCe-EEEEecC
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRK   45 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~-v~~~~r~   45 (226)
                      +++.+|+|.|++| +|.++++.|+..|.+ +.+++.+
T Consensus        17 L~~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d   52 (198)
T cd01485          17 LRSAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHR   52 (198)
T ss_pred             HhhCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECC
Confidence            5567888887765 999999999999975 8888876

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=96.42  E-value=0.042  Score=40.26  Aligned_cols=31  Identities=19%  Similarity=0.288  Sum_probs=26.8

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCCC-eEEEEecC
Q 027248           14 VAIVTASTQGIGFGIAERLGLEGA-SVVVSSRK   45 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~   45 (226)
                      +++|.|+ ||+|.++++.|+..|. ++.+++.+
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d   32 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFD   32 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCC
Confidence            3788886 8999999999999997 58888866

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=96.42  E-value=0.0088  Score=43.17  Aligned_cols=86  Identities=19%  Similarity=0.139  Sum_probs=51.6

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCCCeEEEE-ecCcchHHHHHHHHHhc--------CCcEEEEEeeCCCHHHHHHHHHHHH
Q 027248           14 VAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKAR--------GIEVIGVVCHVSNGQQRKNLINQTI   84 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~~--------~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (226)
                      ++-|+|+ |.+|.++++.|.+.|++|..+ +|+.+..+.+...+...        -.+...+..-+.|. .+..+.+++.
T Consensus        12 ~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpDd-aI~~va~~La   89 (127)
T PF10727_consen   12 KIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPDD-AIAEVAEQLA   89 (127)
T ss_dssp             EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-CC-HHHHHHHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEechH-HHHHHHHHHH
Confidence            5788887 899999999999999997665 56665555554433211        11223333455554 6788888877


Q ss_pred             HH--hCCCCEEEEcCCCCC
Q 027248           85 EK--FGKIDVVVSNAAANP  101 (226)
Q Consensus        85 ~~--~~~id~li~nag~~~  101 (226)
                      ..  ..+=.+++|+.|-..
T Consensus        90 ~~~~~~~g~iVvHtSGa~~  108 (127)
T PF10727_consen   90 QYGAWRPGQIVVHTSGALG  108 (127)
T ss_dssp             CC--S-TT-EEEES-SS--
T ss_pred             HhccCCCCcEEEECCCCCh
Confidence            64  223348999999754

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PRK05442 malate dehydrogenase; Provisional

Probab=96.41  E-value=0.025  Score=47.64  Aligned_cols=118  Identities=12%  Similarity=0.130  Sum_probs=66.7

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCC-------eEEEEecCcc--hHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHH
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGA-------SVVVSSRKQK--NVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQT   83 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~-------~v~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   83 (226)
                      +.+.|+|++|.+|..++..|+..|.       ++++++++++  +++....++......... ...++.         ..
T Consensus         5 ~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~-~~~i~~---------~~   74 (326)
T PRK05442          5 VRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLA-GVVITD---------DP   74 (326)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcC-CcEEec---------Ch
Confidence            5789999999999999999988663       6999999653  344333333322100000 001111         11


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEec
Q 027248           84 IEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISS  147 (226)
Q Consensus        84 ~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS  147 (226)
                      .+.+..-|++|..||...  ++  ..+.   .+.+..|..-.-.+.+.+..+-.+++.++.+|-
T Consensus        75 y~~~~daDiVVitaG~~~--k~--g~tR---~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsN  131 (326)
T PRK05442         75 NVAFKDADVALLVGARPR--GP--GMER---KDLLEANGAIFTAQGKALNEVAARDVKVLVVGN  131 (326)
T ss_pred             HHHhCCCCEEEEeCCCCC--CC--CCcH---HHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCC
Confidence            223458999999999754  22  2233   455666754444444444333223456666663

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=96.41  E-value=0.024  Score=47.67  Aligned_cols=40  Identities=25%  Similarity=0.268  Sum_probs=35.8

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcc
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK   47 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~   47 (226)
                      ..++.||++-|.| .|.||+++++.+...|++|+..+|++.
T Consensus       141 ~~~l~gktvGIiG-~GrIG~avA~r~~~Fgm~v~y~~~~~~  180 (324)
T COG1052         141 GFDLRGKTLGIIG-LGRIGQAVARRLKGFGMKVLYYDRSPN  180 (324)
T ss_pred             ccCCCCCEEEEEC-CCHHHHHHHHHHhcCCCEEEEECCCCC
Confidence            3578999999997 679999999999999999999999875

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.40  E-value=0.042  Score=42.94  Aligned_cols=36  Identities=14%  Similarity=0.304  Sum_probs=32.2

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRK   45 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~   45 (226)
                      .++.++++|.|+ ||+|..+++.|++.|. ++++++.+
T Consensus        18 ~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        18 KLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            456788999987 7899999999999998 59999998

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=96.39  E-value=0.047  Score=45.67  Aligned_cols=116  Identities=16%  Similarity=0.112  Sum_probs=65.5

Q ss_pred             EEEEcCCCchhHHHHHHHHhCCC--eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCE
Q 027248           15 AIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~   92 (226)
                      +.|+|++|.+|.+++..|+..+.  +++++++++  .....-++........+..+.  ..++       ..+.+..-|+
T Consensus         2 V~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~--a~g~a~DL~~~~~~~~i~~~~--~~~~-------~~~~~~daDi   70 (312)
T TIGR01772         2 VAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG--AAGVAADLSHIPTAASVKGFS--GEEG-------LENALKGADV   70 (312)
T ss_pred             EEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC--CcEEEchhhcCCcCceEEEec--CCCc-------hHHHcCCCCE
Confidence            78999999999999999998874  699999977  211111222211111111100  0000       1223458999


Q ss_pred             EEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccC
Q 027248           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (226)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~  149 (226)
                      +|..||....  +  ..+.   .+.+..|..-.-.+.+.+..+ ..++.++++|-..
T Consensus        71 vvitaG~~~~--~--g~~R---~dll~~N~~I~~~i~~~i~~~-~p~~iiivvsNPv  119 (312)
T TIGR01772        71 VVIPAGVPRK--P--GMTR---DDLFNVNAGIVKDLVAAVAES-CPKAMILVITNPV  119 (312)
T ss_pred             EEEeCCCCCC--C--CccH---HHHHHHhHHHHHHHHHHHHHh-CCCeEEEEecCch
Confidence            9999997542  1  1222   445666765443444433333 2356777777665

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=96.38  E-value=0.056  Score=45.57  Aligned_cols=40  Identities=20%  Similarity=0.194  Sum_probs=33.6

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCe-EEEEecCcchHHH
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQKNVDE   51 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~-v~~~~r~~~~~~~   51 (226)
                      .|++++|+| +|++|...++.....|++ |+.+++++++.+.
T Consensus       160 ~g~~vlV~G-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~  200 (347)
T PRK10309        160 EGKNVIIIG-AGTIGLLAIQCAVALGAKSVTAIDINSEKLAL  200 (347)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCHHHHHH
Confidence            578999997 599999999988889997 6788888877654

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=96.37  E-value=0.032  Score=46.25  Aligned_cols=41  Identities=27%  Similarity=0.274  Sum_probs=35.5

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHH
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEA   52 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~   52 (226)
                      +.+++|.|+++++|.++++.....|++|+.+.+++++.+.+
T Consensus       147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~  187 (325)
T cd05280         147 DGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYL  187 (325)
T ss_pred             CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            46899999999999999988888999999999988765544

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>PRK11207 tellurite resistance protein TehB; Provisional

Probab=96.37  E-value=0.17  Score=39.25  Aligned_cols=105  Identities=11%  Similarity=0.107  Sum_probs=66.9

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCC-cEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI-EVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      ..++++|-.|++.|.   .+..|+++|++|+.++.+++.++.+.+.....+. ++.+...|+.+..        .   -+
T Consensus        29 ~~~~~vLDiGcG~G~---~a~~La~~g~~V~gvD~S~~~i~~a~~~~~~~~~~~v~~~~~d~~~~~--------~---~~   94 (197)
T PRK11207         29 VKPGKTLDLGCGNGR---NSLYLAANGFDVTAWDKNPMSIANLERIKAAENLDNLHTAVVDLNNLT--------F---DG   94 (197)
T ss_pred             CCCCcEEEECCCCCH---HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCcceEEecChhhCC--------c---CC
Confidence            356789999987765   4566778899999999999887777666555443 3555555654321        1   14


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEe
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~s  146 (226)
                      .+|+++++.....       .+.++..           .+++.+...++++|.++.+.
T Consensus        95 ~fD~I~~~~~~~~-------~~~~~~~-----------~~l~~i~~~LkpgG~~~~~~  134 (197)
T PRK11207         95 EYDFILSTVVLMF-------LEAKTIP-----------GLIANMQRCTKPGGYNLIVA  134 (197)
T ss_pred             CcCEEEEecchhh-------CCHHHHH-----------HHHHHHHHHcCCCcEEEEEE
Confidence            7999987754322       1222222           23556666777888855544

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=96.36  E-value=0.0044  Score=42.98  Aligned_cols=38  Identities=26%  Similarity=0.211  Sum_probs=32.8

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCc
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ   46 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~   46 (226)
                      .+++||.++|+|| |.+|..-++.|++.|++|.+++...
T Consensus         3 l~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~   40 (103)
T PF13241_consen    3 LDLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI   40 (103)
T ss_dssp             E--TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence            5789999999998 8999999999999999999999886

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=96.34  E-value=0.0099  Score=44.67  Aligned_cols=46  Identities=28%  Similarity=0.367  Sum_probs=35.8

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEA   52 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~   52 (226)
                      ..+++||+++|.|.+.-+|+.++..|.++|+.|.++.+....+++.
T Consensus        31 ~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~~   76 (160)
T PF02882_consen   31 GIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQEI   76 (160)
T ss_dssp             T-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHHH
T ss_pred             CCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccce
Confidence            3568999999999999999999999999999999988877655443

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=96.34  E-value=0.076  Score=44.38  Aligned_cols=117  Identities=18%  Similarity=0.132  Sum_probs=69.5

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCC--CeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCC
Q 027248           14 VAIVTASTQGIGFGIAERLGLEG--ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id   91 (226)
                      ++.|+|++|.+|.+++..|+..|  .++++++.+  +++...-++........+..+.  ..++       +.+.+..-|
T Consensus         2 KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~~~~i~~~~--~~~~-------~y~~~~daD   70 (310)
T cd01337           2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINTPAKVTGYL--GPEE-------LKKALKGAD   70 (310)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCCcceEEEec--CCCc-------hHHhcCCCC
Confidence            47899999999999999999888  469999998  3333333333321111111110  1111       112234899


Q ss_pred             EEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccC
Q 027248           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (226)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~  149 (226)
                      ++|..||....  +  ..+.   .+.++.|..-...+.+.+..+ ..++.++++|-..
T Consensus        71 ivvitaG~~~k--~--g~tR---~dll~~N~~i~~~i~~~i~~~-~p~a~vivvtNPv  120 (310)
T cd01337          71 VVVIPAGVPRK--P--GMTR---DDLFNINAGIVRDLATAVAKA-CPKALILIISNPV  120 (310)
T ss_pred             EEEEeCCCCCC--C--CCCH---HHHHHHHHHHHHHHHHHHHHh-CCCeEEEEccCch
Confidence            99999998542  1  2233   455666765555555555444 3356788877665

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.34  E-value=0.012  Score=48.50  Aligned_cols=41  Identities=24%  Similarity=0.314  Sum_probs=36.8

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcc
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK   47 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~   47 (226)
                      ..+++||.++|+|.+.-+|+.++..|.++|++|.++.++..
T Consensus       153 ~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~  193 (286)
T PRK14175        153 DIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSK  193 (286)
T ss_pred             CCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCch
Confidence            34789999999999999999999999999999999888643

>PLN02740 Alcohol dehydrogenase-like

Probab=96.33  E-value=0.028  Score=48.19  Aligned_cols=79  Identities=15%  Similarity=0.245  Sum_probs=52.4

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCH-HHHHHHHHHHHHHhC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNG-QQRKNLINQTIEKFG   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~~   88 (226)
                      .|++++|.|+ |++|...++.+...|+ +|+.+++++++++.+. ++   +.+. +  .|..+. +...+.+.++..  +
T Consensus       198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~-~~---Ga~~-~--i~~~~~~~~~~~~v~~~~~--~  267 (381)
T PLN02740        198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKGK-EM---GITD-F--INPKDSDKPVHERIREMTG--G  267 (381)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHH-Hc---CCcE-E--EecccccchHHHHHHHHhC--C
Confidence            4889999985 9999999998888998 5999999887766553 22   3322 2  243332 122222232221  2


Q ss_pred             CCCEEEEcCCC
Q 027248           89 KIDVVVSNAAA   99 (226)
Q Consensus        89 ~id~li~nag~   99 (226)
                      .+|++|.+.|.
T Consensus       268 g~dvvid~~G~  278 (381)
T PLN02740        268 GVDYSFECAGN  278 (381)
T ss_pred             CCCEEEECCCC
Confidence            69999999884

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=96.32  E-value=0.033  Score=47.95  Aligned_cols=83  Identities=17%  Similarity=0.196  Sum_probs=56.4

Q ss_pred             CcccccccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHH
Q 027248            1 MEKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLI   80 (226)
Q Consensus         1 ~~~~~~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   80 (226)
                      |-+.-.....+.|+++|+|++ .+|+.+++.+.+.|++|++++.+++.......       + ..+..|..|.+.+.+++
T Consensus         1 ~~~~~~~~~~~~~~ilIiG~g-~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~a-------d-~~~~~~~~d~~~l~~~~   71 (395)
T PRK09288          1 MTRLGTPLSPSATRVMLLGSG-ELGKEVAIEAQRLGVEVIAVDRYANAPAMQVA-------H-RSHVIDMLDGDALRAVI   71 (395)
T ss_pred             CccccCCCCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCCchHHhh-------h-heEECCCCCHHHHHHHH
Confidence            344444455566799999875 68999999999999999999998764222211       1 13456778877766665


Q ss_pred             HHHHHHhCCCCEEEEcC
Q 027248           81 NQTIEKFGKIDVVVSNA   97 (226)
Q Consensus        81 ~~~~~~~~~id~li~na   97 (226)
                      ++     ..+|.++...
T Consensus        72 ~~-----~~id~vi~~~   83 (395)
T PRK09288         72 ER-----EKPDYIVPEI   83 (395)
T ss_pred             HH-----hCCCEEEEee
Confidence            43     2688887543

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=96.31  E-value=0.06  Score=43.32  Aligned_cols=37  Identities=11%  Similarity=0.281  Sum_probs=30.6

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCc
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQ   46 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~   46 (226)
                      .+++++|+|.|+ ||+|..+++.|+..|. ++.+++.+.
T Consensus        21 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~   58 (240)
T TIGR02355        21 ALKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDT   58 (240)
T ss_pred             HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence            466788888875 6999999999999996 488888763

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=96.29  E-value=0.065  Score=44.61  Aligned_cols=116  Identities=12%  Similarity=0.103  Sum_probs=68.8

Q ss_pred             EEEEcCCCchhHHHHHHHHhCC--CeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCE
Q 027248           15 AIVTASTQGIGFGIAERLGLEG--ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~   92 (226)
                      +.|.|+ |++|.+++..|+..|  .+++++++++++++....++..............++.          .+....-|+
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~~~----------~~~l~~aDi   69 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRGGD----------YADAADADI   69 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEECCC----------HHHhCCCCE
Confidence            357786 679999999999998  5799999999888877776654422100001111111          012348999


Q ss_pred             EEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccC
Q 027248           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (226)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~  149 (226)
                      +|..+|....  +  ..+.   ...+..|..-...+.+.+..+- .++.++++|...
T Consensus        70 VIitag~p~~--~--~~~R---~~l~~~n~~i~~~~~~~i~~~~-p~~~viv~sNP~  118 (300)
T cd00300          70 VVITAGAPRK--P--GETR---LDLINRNAPILRSVITNLKKYG-PDAIILVVSNPV  118 (300)
T ss_pred             EEEcCCCCCC--C--CCCH---HHHHHHHHHHHHHHHHHHHHhC-CCeEEEEccChH
Confidence            9999997542  1  1233   3344456444434444443332 356777777543

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=96.28  E-value=0.011  Score=46.78  Aligned_cols=43  Identities=30%  Similarity=0.418  Sum_probs=37.3

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHH
Q 027248           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKL   56 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~   56 (226)
                      ++.|+||+|.+|.++++.|++.|++|.+.+|++++.+....+.
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~~   44 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKA   44 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHHH
Confidence            3889999999999999999999999999999988876665543

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=96.28  E-value=0.036  Score=47.26  Aligned_cols=79  Identities=13%  Similarity=0.218  Sum_probs=52.9

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCH-HHHHHHHHHHHHHhC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNG-QQRKNLINQTIEKFG   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~~   88 (226)
                      .|.+++|.|+ |++|...++.+...|+ +|+.+++++++++.+ .++   +.+..   .|..+. ++..+.+.++..  +
T Consensus       186 ~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~-~~l---Ga~~~---i~~~~~~~~~~~~v~~~~~--~  255 (368)
T cd08300         186 PGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELA-KKF---GATDC---VNPKDHDKPIQQVLVEMTD--G  255 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHc---CCCEE---EcccccchHHHHHHHHHhC--C
Confidence            4889999975 8999999999999999 699999998876544 333   33221   243332 233333333322  3


Q ss_pred             CCCEEEEcCCC
Q 027248           89 KIDVVVSNAAA   99 (226)
Q Consensus        89 ~id~li~nag~   99 (226)
                      .+|+++.+.|.
T Consensus       256 g~d~vid~~g~  266 (368)
T cd08300         256 GVDYTFECIGN  266 (368)
T ss_pred             CCcEEEECCCC
Confidence            79999998874

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=96.27  E-value=0.061  Score=39.06  Aligned_cols=78  Identities=17%  Similarity=0.329  Sum_probs=52.0

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCc-------------------chHHHHHHHHHhcCC--cEEEEEee
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQ-------------------KNVDEAVVKLKARGI--EVIGVVCH   69 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~~~~~~~--~~~~~~~D   69 (226)
                      .++++|.|+ |++|..+++.|+..|. ++.+++.+.                   .+.+.+.+.+.+..+  ++..+..+
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~   80 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK   80 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence            467888774 7999999999999997 589988762                   234455556665544  45555555


Q ss_pred             CCCHHHHHHHHHHHHHHhCCCCEEEEcCC
Q 027248           70 VSNGQQRKNLINQTIEKFGKIDVVVSNAA   98 (226)
Q Consensus        70 v~~~~~v~~~~~~~~~~~~~id~li~nag   98 (226)
                      + +++...++++       ..|++|.+..
T Consensus        81 ~-~~~~~~~~~~-------~~d~vi~~~d  101 (135)
T PF00899_consen   81 I-DEENIEELLK-------DYDIVIDCVD  101 (135)
T ss_dssp             C-SHHHHHHHHH-------TSSEEEEESS
T ss_pred             c-cccccccccc-------CCCEEEEecC
Confidence            6 3444444442       7898887654

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=96.25  E-value=0.065  Score=46.26  Aligned_cols=41  Identities=12%  Similarity=0.183  Sum_probs=34.8

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHH
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDE   51 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~   51 (226)
                      .|.+++|+|+++++|.++++.+...|++++.+.++.++.+.
T Consensus       189 ~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~  229 (398)
T TIGR01751       189 PGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEY  229 (398)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHH
Confidence            47899999999999999999888999998888777655433

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.25  E-value=0.048  Score=41.58  Aligned_cols=31  Identities=19%  Similarity=0.245  Sum_probs=27.3

Q ss_pred             EEEEcCCCchhHHHHHHHHhCCCe-EEEEecCc
Q 027248           15 AIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQ   46 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g~~-v~~~~r~~   46 (226)
                      ++|.|+ ||+|..+++.|++.|.. +.+++.+.
T Consensus         2 VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           2 VGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            677774 89999999999999975 99999986

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.25  E-value=0.017  Score=50.69  Aligned_cols=77  Identities=16%  Similarity=0.143  Sum_probs=58.2

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      ...++++|.|+ |.+|+.+++.|.+.|.+|++++++++..+...++    +..+.++.+|.++++..+++-      ..+
T Consensus       229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~----~~~~~~i~gd~~~~~~L~~~~------~~~  297 (453)
T PRK09496        229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEE----LPNTLVLHGDGTDQELLEEEG------IDE  297 (453)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH----CCCCeEEECCCCCHHHHHhcC------Ccc
Confidence            45688999998 9999999999999999999999998776655443    234567888999887754431      136


Q ss_pred             CCEEEEcC
Q 027248           90 IDVVVSNA   97 (226)
Q Consensus        90 id~li~na   97 (226)
                      .|.+|...
T Consensus       298 a~~vi~~~  305 (453)
T PRK09496        298 ADAFIALT  305 (453)
T ss_pred             CCEEEECC
Confidence            77776443

>TIGR00936 ahcY adenosylhomocysteinase

Probab=96.22  E-value=0.044  Score=47.43  Aligned_cols=40  Identities=30%  Similarity=0.297  Sum_probs=35.4

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchH
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNV   49 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~   49 (226)
                      .+.||+++|.| .|.||+.+++.+...|++|+++++++.+.
T Consensus       192 ~l~Gk~VvViG-~G~IG~~vA~~ak~~Ga~ViV~d~dp~r~  231 (406)
T TIGR00936       192 LIAGKTVVVAG-YGWCGKGIAMRARGMGARVIVTEVDPIRA  231 (406)
T ss_pred             CCCcCEEEEEC-CCHHHHHHHHHHhhCcCEEEEEeCChhhH
Confidence            47899999998 46799999999999999999999988654

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.20  E-value=0.041  Score=47.50  Aligned_cols=48  Identities=21%  Similarity=0.351  Sum_probs=42.4

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCC-CeEEEEecCcchHHHHHHHHH
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEG-ASVVVSSRKQKNVDEAVVKLK   57 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~   57 (226)
                      ++++|+++|.|+ |-+|.-.+++|.++| .+|+++.|+.++.+++.+++.
T Consensus       175 ~L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~  223 (414)
T COG0373         175 SLKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG  223 (414)
T ss_pred             ccccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC
Confidence            478999999986 579999999999999 569999999999998888875

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=96.19  E-value=0.038  Score=41.58  Aligned_cols=84  Identities=11%  Similarity=0.093  Sum_probs=55.5

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHH-------hcCCcEEEEEeeCCCHHHHHHHHHH--H
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLK-------ARGIEVIGVVCHVSNGQQRKNLINQ--T   83 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~-------~~~~~~~~~~~Dv~~~~~v~~~~~~--~   83 (226)
                      ++|-+.|- |-+|..+++.|++.|++|.+.+|++++.+++.++-.       +.-..+.++..=+.+.+++++++..  +
T Consensus         2 ~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i   80 (163)
T PF03446_consen    2 MKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENI   80 (163)
T ss_dssp             BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTH
T ss_pred             CEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHH
Confidence            34777776 799999999999999999999999988777654310       0001234555678888989888887  6


Q ss_pred             HHHhCCCCEEEEcC
Q 027248           84 IEKFGKIDVVVSNA   97 (226)
Q Consensus        84 ~~~~~~id~li~na   97 (226)
                      .....+=.++|+..
T Consensus        81 ~~~l~~g~iiid~s   94 (163)
T PF03446_consen   81 LAGLRPGKIIIDMS   94 (163)
T ss_dssp             GGGS-TTEEEEE-S
T ss_pred             hhccccceEEEecC
Confidence            55443444555443

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK08223 hypothetical protein; Validated

Probab=96.18  E-value=0.043  Score=45.17  Aligned_cols=37  Identities=14%  Similarity=0.122  Sum_probs=30.8

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCc
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQ   46 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~   46 (226)
                      .+++.+|+|.|+ ||+|..+++.|+..|. ++.++|.+.
T Consensus        24 kL~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~   61 (287)
T PRK08223         24 RLRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDV   61 (287)
T ss_pred             HHhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCC
Confidence            356788898875 5999999999999996 488988873

>PRK13243 glyoxylate reductase; Reviewed

Probab=96.17  E-value=0.056  Score=45.69  Aligned_cols=40  Identities=25%  Similarity=0.215  Sum_probs=35.8

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcch
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN   48 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~   48 (226)
                      ..+.||++.|.|- |.||+++++.|...|++|+..+|+...
T Consensus       146 ~~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~  185 (333)
T PRK13243        146 YDVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRKP  185 (333)
T ss_pred             cCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCCh
Confidence            4689999999997 899999999999999999999987643

>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.14  E-value=0.038  Score=45.43  Aligned_cols=43  Identities=23%  Similarity=0.341  Sum_probs=36.5

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNV   49 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~   49 (226)
                      ..+++||.++|.|.|+-+|+.++..|.++|+.|.++......+
T Consensus       153 ~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~~l  195 (284)
T PRK14179        153 NVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNL  195 (284)
T ss_pred             CCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCCCH
Confidence            3468999999999999999999999999999998874444333

>COG2263 Predicted RNA methylase [Translation, ribosomal structure and biogenesis]

Probab=96.13  E-value=0.092  Score=40.34  Aligned_cols=81  Identities=23%  Similarity=0.225  Sum_probs=63.6

Q ss_pred             ccccccCCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHH
Q 027248            5 KMAKRFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQT   83 (226)
Q Consensus         5 ~~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   83 (226)
                      .++.+++||+|+=-|++.|+   ++...+..|+ +|+.++.+++.++...+...+..+++.++.+|+++...        
T Consensus        39 ~~~g~l~g~~V~DlG~GTG~---La~ga~~lGa~~V~~vdiD~~a~ei~r~N~~~l~g~v~f~~~dv~~~~~--------  107 (198)
T COG2263          39 YLRGDLEGKTVLDLGAGTGI---LAIGAALLGASRVLAVDIDPEALEIARANAEELLGDVEFVVADVSDFRG--------  107 (198)
T ss_pred             HHcCCcCCCEEEEcCCCcCH---HHHHHHhcCCcEEEEEecCHHHHHHHHHHHHhhCCceEEEEcchhhcCC--------
Confidence            36788999999999987665   2222234575 59999999999988888877777889999999987664        


Q ss_pred             HHHhCCCCEEEEcCCCCC
Q 027248           84 IEKFGKIDVVVSNAAANP  101 (226)
Q Consensus        84 ~~~~~~id~li~nag~~~  101 (226)
                           ++|.+|-|+-+..
T Consensus       108 -----~~dtvimNPPFG~  120 (198)
T COG2263         108 -----KFDTVIMNPPFGS  120 (198)
T ss_pred             -----ccceEEECCCCcc
Confidence                 8899999997764

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=96.12  E-value=0.038  Score=46.17  Aligned_cols=31  Identities=23%  Similarity=0.389  Sum_probs=26.5

Q ss_pred             EEEEcCCCchhHHHHHHHHhCCCe-EEEEecCc
Q 027248           15 AIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQ   46 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g~~-v~~~~r~~   46 (226)
                      |+|.|+ ||+|.++++.|+..|.. +.++|.+.
T Consensus         2 VlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~   33 (312)
T cd01489           2 VLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDT   33 (312)
T ss_pred             EEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCC
Confidence            677875 89999999999999965 88888763

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=96.11  E-value=0.078  Score=45.07  Aligned_cols=75  Identities=20%  Similarity=0.200  Sum_probs=49.6

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      .|++++|.| +|++|...++.....|+++++++++.++.+...+++   +.+..+   |-.+.+.+       .+..+.+
T Consensus       180 ~g~~vlV~G-~G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~---Ga~~~i---~~~~~~~~-------~~~~~~~  245 (357)
T PLN02514        180 SGLRGGILG-LGGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHL---GADDYL---VSSDAAEM-------QEAADSL  245 (357)
T ss_pred             CCCeEEEEc-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhc---CCcEEe---cCCChHHH-------HHhcCCC
Confidence            588999995 599999999888889999988888776655544433   332211   22222222       2222468


Q ss_pred             CEEEEcCCC
Q 027248           91 DVVVSNAAA   99 (226)
Q Consensus        91 d~li~nag~   99 (226)
                      |+++.+.|.
T Consensus       246 D~vid~~g~  254 (357)
T PLN02514        246 DYIIDTVPV  254 (357)
T ss_pred             cEEEECCCc
Confidence            999988873

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=96.10  E-value=0.041  Score=45.37  Aligned_cols=76  Identities=20%  Similarity=0.296  Sum_probs=50.9

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      .|.+++|.|+++++|.++++.....|++|+.+.+++++.+.+ .++   +.+.. + .+  .. +...   ++.+....+
T Consensus       142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~~~-~-~~--~~-~~~~---~i~~~~~~~  209 (320)
T cd08243         142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALL-KEL---GADEV-V-ID--DG-AIAE---QLRAAPGGF  209 (320)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-Hhc---CCcEE-E-ec--Cc-cHHH---HHHHhCCCc
Confidence            578999999999999999999999999999998887665443 222   32221 1 12  21 2122   222222479


Q ss_pred             CEEEEcCC
Q 027248           91 DVVVSNAA   98 (226)
Q Consensus        91 d~li~nag   98 (226)
                      |+++++.|
T Consensus       210 d~vl~~~~  217 (320)
T cd08243         210 DKVLELVG  217 (320)
T ss_pred             eEEEECCC
Confidence            99998876

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=96.09  E-value=0.027  Score=44.85  Aligned_cols=37  Identities=27%  Similarity=0.398  Sum_probs=33.6

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCC---eEEEEecC
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGA---SVVVSSRK   45 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~---~v~~~~r~   45 (226)
                      .++++++++|.|+ |+.|+++++.|.+.|.   ++.+++|+
T Consensus        21 ~~l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~   60 (226)
T cd05311          21 KKIEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSK   60 (226)
T ss_pred             CCccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCC
Confidence            3688999999998 8999999999999997   59999998

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=96.09  E-value=0.079  Score=37.81  Aligned_cols=90  Identities=24%  Similarity=0.399  Sum_probs=61.4

Q ss_pred             chhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC--CCCEEEEcCCCC
Q 027248           23 GIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG--KIDVVVSNAAAN  100 (226)
Q Consensus        23 giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~--~id~li~nag~~  100 (226)
                      |||...++.+...|++|+.+++++++++.+. +   .|.+.   ..|-.+.+    +.+++.+..+  .+|++|.+.|..
T Consensus         1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~-~---~Ga~~---~~~~~~~~----~~~~i~~~~~~~~~d~vid~~g~~   69 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAK-E---LGADH---VIDYSDDD----FVEQIRELTGGRGVDVVIDCVGSG   69 (130)
T ss_dssp             HHHHHHHHHHHHTTSEEEEEESSHHHHHHHH-H---TTESE---EEETTTSS----HHHHHHHHTTTSSEEEEEESSSSH
T ss_pred             ChHHHHHHHHHHcCCEEEEEECCHHHHHHHH-h---hcccc---cccccccc----cccccccccccccceEEEEecCcH
Confidence            6899999989899999999999987764443 2   23222   23555554    4455555443  699999999841


Q ss_pred             CCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccC
Q 027248          101 PSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (226)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~  149 (226)
                                 +               ..+..+..++++|+++.++...
T Consensus        70 -----------~---------------~~~~~~~~l~~~G~~v~vg~~~   92 (130)
T PF00107_consen   70 -----------D---------------TLQEAIKLLRPGGRIVVVGVYG   92 (130)
T ss_dssp             -----------H---------------HHHHHHHHEEEEEEEEEESSTS
T ss_pred             -----------H---------------HHHHHHHHhccCCEEEEEEccC
Confidence                       1               1334445567789999998776

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=96.08  E-value=0.19  Score=42.31  Aligned_cols=119  Identities=17%  Similarity=0.180  Sum_probs=67.4

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhc----CCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKAR----GIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      +.+++.|+| +|.+|..++..++..|. +|++++++++......-.+...    +....+..  .++.+           
T Consensus         5 ~~~KI~IIG-aG~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~--~~d~~-----------   70 (321)
T PTZ00082          5 KRRKISLIG-SGNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIG--TNNYE-----------   70 (321)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEE--CCCHH-----------
Confidence            346899999 58899999999999994 8999999998653222212111    11222211  11211           


Q ss_pred             HhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc---CCEEEEEeccC
Q 027248           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIA  149 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~---~~~iv~~sS~~  149 (226)
                      .+..-|++|+.+|...... ..+.++.. .+.+..|+.    +.+.+.+.+.+   ++.++++|-..
T Consensus        71 ~l~~aDiVI~tag~~~~~~-~~~~~~~r-~~~l~~n~~----i~~~i~~~i~~~~p~a~~iv~sNP~  131 (321)
T PTZ00082         71 DIAGSDVVIVTAGLTKRPG-KSDKEWNR-DDLLPLNAK----IMDEVAEGIKKYCPNAFVIVITNPL  131 (321)
T ss_pred             HhCCCCEEEECCCCCCCCC-CCcCCCCH-HHHHHHHHH----HHHHHHHHHHHHCCCeEEEEecCcH
Confidence            1248899999999864211 11111111 334455643    45555555433   45677776544

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=96.06  E-value=0.033  Score=37.15  Aligned_cols=36  Identities=39%  Similarity=0.594  Sum_probs=31.3

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhC-CCeEEEEec
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLE-GASVVVSSR   44 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~-g~~v~~~~r   44 (226)
                      .++++|+++|.|+ |+.|+.++..|.+. +.+|.+.+|
T Consensus        19 ~~~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r   55 (86)
T cd05191          19 KSLKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR   55 (86)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence            4578999999999 99999999999998 466777777

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.06  E-value=0.042  Score=48.70  Aligned_cols=78  Identities=24%  Similarity=0.227  Sum_probs=52.8

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcc-hHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK-NVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      .++++|+++|.|+ |++|.++++.|.++|++|.+++++.. ......+.+.+.+..+  ...+-..             .
T Consensus        12 ~~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~--~~~~~~~-------------~   75 (480)
T PRK01438         12 SDWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATV--RLGPGPT-------------L   75 (480)
T ss_pred             cCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEE--EECCCcc-------------c
Confidence            3567899999996 77999999999999999999986653 3333445555544332  2111111             0


Q ss_pred             hCCCCEEEEcCCCCC
Q 027248           87 FGKIDVVVSNAAANP  101 (226)
Q Consensus        87 ~~~id~li~nag~~~  101 (226)
                      ....|.+|..+|+..
T Consensus        76 ~~~~D~Vv~s~Gi~~   90 (480)
T PRK01438         76 PEDTDLVVTSPGWRP   90 (480)
T ss_pred             cCCCCEEEECCCcCC
Confidence            136899999998754

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=96.02  E-value=0.23  Score=41.51  Aligned_cols=110  Identities=16%  Similarity=0.126  Sum_probs=65.5

Q ss_pred             EEEEcCCCchhHHHHHHHHhCC--CeEEEEecCcchHHHHHHHHHhcCC---cEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           15 AIVTASTQGIGFGIAERLGLEG--ASVVVSSRKQKNVDEAVVKLKARGI---EVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      +.|.|+ |.+|..++..|+.+|  .+|+++++++++.+.....+.....   ...+. .  .+.+           ....
T Consensus         3 I~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~-~--~d~~-----------~l~~   67 (308)
T cd05292           3 VAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIY-A--GDYA-----------DCKG   67 (308)
T ss_pred             EEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEe-e--CCHH-----------HhCC
Confidence            788998 899999999999999  5799999998877654444442211   11111 1  1111           1348


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEec
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISS  147 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS  147 (226)
                      .|++|..+|....  +  ..+   ..+.+..|..-.-.+.+.+..+ .+++.++.++.
T Consensus        68 aDiViita~~~~~--~--~~~---r~dl~~~n~~i~~~~~~~l~~~-~~~giiiv~tN  117 (308)
T cd05292          68 ADVVVITAGANQK--P--GET---RLDLLKRNVAIFKEIIPQILKY-APDAILLVVTN  117 (308)
T ss_pred             CCEEEEccCCCCC--C--CCC---HHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEecC
Confidence            8999999997542  1  122   2334455544333344333332 23466766654

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=95.99  E-value=0.16  Score=42.39  Aligned_cols=117  Identities=16%  Similarity=0.196  Sum_probs=68.7

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCC-C-eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCC
Q 027248           14 VAIVTASTQGIGFGIAERLGLEG-A-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g-~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id   91 (226)
                      .|.|+|+ |++|.+++..|+.++ . ++++++++++..+....++....... .....+....+        .+.+..-|
T Consensus         2 KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~-~~~~~i~~~~~--------y~~~~~aD   71 (313)
T COG0039           2 KVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPL-GSDVKITGDGD--------YEDLKGAD   71 (313)
T ss_pred             eEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhc-cCceEEecCCC--------hhhhcCCC
Confidence            5889999 999999999998877 3 69999999777666655554431110 00111111100        11134899


Q ss_pred             EEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEecc
Q 027248           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (226)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~  148 (226)
                      ++|..||.....+    .+.   .+.+..|..-.-.+.+.+...-. ++.++.+|-.
T Consensus        72 iVvitAG~prKpG----mtR---~DLl~~Na~I~~~i~~~i~~~~~-d~ivlVvtNP  120 (313)
T COG0039          72 IVVITAGVPRKPG----MTR---LDLLEKNAKIVKDIAKAIAKYAP-DAIVLVVTNP  120 (313)
T ss_pred             EEEEeCCCCCCCC----CCH---HHHHHhhHHHHHHHHHHHHhhCC-CeEEEEecCc
Confidence            9999999865322    333   34455675544444444444322 3455555433

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=95.98  E-value=0.11  Score=43.75  Aligned_cols=40  Identities=15%  Similarity=0.146  Sum_probs=35.2

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcch
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN   48 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~   48 (226)
                      ..+.|+++.|.|. |.||+++++.|...|++|+..+|+++.
T Consensus       142 ~~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~  181 (330)
T PRK12480        142 KPVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNK  181 (330)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhH
Confidence            3578999999975 679999999999999999999998754

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=95.98  E-value=0.019  Score=44.00  Aligned_cols=43  Identities=21%  Similarity=0.320  Sum_probs=35.5

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHH
Q 027248           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLK   57 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~   57 (226)
                      +|.|.|+ |-+|..++..++..|++|.+.+++++.++...+.+.
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~   43 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIE   43 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHH
Confidence            3678887 899999999999999999999999998877666554

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=95.97  E-value=0.053  Score=46.22  Aligned_cols=79  Identities=15%  Similarity=0.318  Sum_probs=51.9

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCH-HHHHHHHHHHHHHhC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNG-QQRKNLINQTIEKFG   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~~   88 (226)
                      .|.+++|.|+ |++|...++.....|+ +|+.+++++++.+.+ +++   +....   .|..+. +++.+.+.++..  +
T Consensus       187 ~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~-~~~---Ga~~~---i~~~~~~~~~~~~v~~~~~--~  256 (369)
T cd08301         187 KGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQA-KKF---GVTEF---VNPKDHDKPVQEVIAEMTG--G  256 (369)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc---CCceE---EcccccchhHHHHHHHHhC--C
Confidence            5889999985 8999999988888998 799999988776544 233   32221   133221 233333333322  3


Q ss_pred             CCCEEEEcCCC
Q 027248           89 KIDVVVSNAAA   99 (226)
Q Consensus        89 ~id~li~nag~   99 (226)
                      .+|+++.+.|.
T Consensus       257 ~~d~vid~~G~  267 (369)
T cd08301         257 GVDYSFECTGN  267 (369)
T ss_pred             CCCEEEECCCC
Confidence            69999998874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=95.95  E-value=0.015  Score=49.96  Aligned_cols=36  Identities=17%  Similarity=0.143  Sum_probs=30.7

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhC-CCeEEEEecCcc
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLE-GASVVVSSRKQK   47 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~-g~~v~~~~r~~~   47 (226)
                      .+++.|.||||.+|.++.+.|.++ +.+|..+.++..
T Consensus        38 ~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~s   74 (381)
T PLN02968         38 KKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRK   74 (381)
T ss_pred             ccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhh
Confidence            357999999999999999999999 578888877543

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=95.95  E-value=0.04  Score=47.80  Aligned_cols=44  Identities=11%  Similarity=0.080  Sum_probs=35.7

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCC---eEEEEecCcchHHHHHH
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGA---SVVVSSRKQKNVDEAVV   54 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~---~v~~~~r~~~~~~~~~~   54 (226)
                      .|.+++|.|++|++|...++.+...|.   +|+.+++++++++.+.+
T Consensus       175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~  221 (410)
T cd08238         175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQR  221 (410)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHH
Confidence            468999999999999998887766654   69999999888765544

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>KOG2013 consensus SMT3/SUMO-activating complex, catalytic component UBA2 [Posttranslational modification, protein turnover, chaperones]

Probab=95.94  E-value=0.041  Score=47.88  Aligned_cols=85  Identities=15%  Similarity=0.265  Sum_probs=56.6

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCe-EEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      ...+++-++|+.|| ||||.++.|.|+..|.+ |.+++-+.=.+..+-.++       .+-+-|+..+.+  .+..++.+
T Consensus         7 ~eai~~~riLvVGa-GGIGCELLKnLal~gf~~IhiIDlDTIDlSNLNRQF-------LFrkkhVgqsKA--~vA~~~v~   76 (603)
T KOG2013|consen    7 HEAIKSGRILVVGA-GGIGCELLKNLALTGFEEIHIIDLDTIDLSNLNRQF-------LFRKKHVGQSKA--TVAAKAVK   76 (603)
T ss_pred             HHHhccCeEEEEec-CcccHHHHHHHHHhcCCeeEEEeccceeccchhhhh-------eeehhhcCchHH--HHHHHHHH
Confidence            34456778888876 69999999999999986 889988765544443332       233345555544  23445555


Q ss_pred             Hh-CCCCEEEEcCCCCC
Q 027248           86 KF-GKIDVVVSNAAANP  101 (226)
Q Consensus        86 ~~-~~id~li~nag~~~  101 (226)
                      +| +.++++-+.|-+..
T Consensus        77 ~Fnpn~~l~~yhanI~e   93 (603)
T KOG2013|consen   77 QFNPNIKLVPYHANIKE   93 (603)
T ss_pred             HhCCCCceEeccccccC
Confidence            55 47888877777653

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.92  E-value=0.025  Score=46.52  Aligned_cols=43  Identities=23%  Similarity=0.255  Sum_probs=36.9

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNV   49 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~   49 (226)
                      ..+++||.++|.|.+.-+|+.++..|.++|+.|.++......+
T Consensus       152 ~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~~l  194 (285)
T PRK14191        152 HIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTKDL  194 (285)
T ss_pred             CCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcHHH
Confidence            3578999999999999999999999999999998876554433

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=95.90  E-value=0.058  Score=45.26  Aligned_cols=78  Identities=17%  Similarity=0.226  Sum_probs=52.7

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH--hC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK--FG   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~--~~   88 (226)
                      .|.+++|.|+++++|.++++.+...|++|+.+.+++++.+.+ +++   +.+..   .+..+.+..+.    +.+.  .+
T Consensus       165 ~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~~v---~~~~~~~~~~~----~~~~~~~~  233 (341)
T cd08297         165 PGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELA-KEL---GADAF---VDFKKSDDVEA----VKELTGGG  233 (341)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHc---CCcEE---EcCCCccHHHH----HHHHhcCC
Confidence            478999999999999999999999999999999988765544 333   32221   23333332222    2222  23


Q ss_pred             CCCEEEEcCCC
Q 027248           89 KIDVVVSNAAA   99 (226)
Q Consensus        89 ~id~li~nag~   99 (226)
                      .+|+++++.+.
T Consensus       234 ~vd~vl~~~~~  244 (341)
T cd08297         234 GAHAVVVTAVS  244 (341)
T ss_pred             CCCEEEEcCCc
Confidence            69999986653

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>PLN03139 formate dehydrogenase; Provisional

Probab=95.89  E-value=0.092  Score=45.23  Aligned_cols=38  Identities=18%  Similarity=0.197  Sum_probs=34.3

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCc
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ   46 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~   46 (226)
                      .++.||++.|.| .|.||+++++.|...|++|+..+|+.
T Consensus       195 ~~L~gktVGIVG-~G~IG~~vA~~L~afG~~V~~~d~~~  232 (386)
T PLN03139        195 YDLEGKTVGTVG-AGRIGRLLLQRLKPFNCNLLYHDRLK  232 (386)
T ss_pred             cCCCCCEEEEEe-ecHHHHHHHHHHHHCCCEEEEECCCC
Confidence            468999999999 57899999999999999999988874

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=95.88  E-value=0.43  Score=39.90  Aligned_cols=110  Identities=11%  Similarity=0.158  Sum_probs=68.6

Q ss_pred             EEEEcCCCchhHHHHHHHHhCCC--eEEEEecCcchHHHHHHHHHhcCC-----cEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248           15 AIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKARGI-----EVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      +.|.|+ |.+|..++..|+..|.  ++++++.+++.++.....+.....     ++.+. .  .+.           +..
T Consensus         2 i~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~-~--~~y-----------~~~   66 (307)
T cd05290           2 LVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIR-A--GDY-----------DDC   66 (307)
T ss_pred             EEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEE-E--CCH-----------HHh
Confidence            678898 9999999999998884  599999999887777666665321     23332 2  121           123


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc---CCEEEEEecc
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSI  148 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~---~~~iv~~sS~  148 (226)
                      ..-|++|..||.....+    .+.+ =.+.+..|.    .+++...+.+++   ++.++.+|-.
T Consensus        67 ~~aDivvitaG~~~kpg----~tr~-R~dll~~N~----~I~~~i~~~i~~~~p~~i~ivvsNP  121 (307)
T cd05290          67 ADADIIVITAGPSIDPG----NTDD-RLDLAQTNA----KIIREIMGNITKVTKEAVIILITNP  121 (307)
T ss_pred             CCCCEEEECCCCCCCCC----CCch-HHHHHHHHH----HHHHHHHHHHHHhCCCeEEEEecCc
Confidence            48999999999854211    2210 133445564    455556665543   3555555544

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=95.87  E-value=0.05  Score=44.67  Aligned_cols=78  Identities=17%  Similarity=0.263  Sum_probs=51.8

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh--C
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF--G   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--~   88 (226)
                      .|++++|+|+++++|.+++..+...|++|+.++++.++.+.+. +   .+.+. .+  +..+.+..+    .+.+..  .
T Consensus       139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~---~g~~~-~~--~~~~~~~~~----~i~~~~~~~  207 (323)
T cd08241         139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALAR-A---LGADH-VI--DYRDPDLRE----RVKALTGGR  207 (323)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHHH-H---cCCce-ee--ecCCccHHH----HHHHHcCCC
Confidence            5789999999999999999999999999999998876654442 2   23221 11  222222222    222221  3


Q ss_pred             CCCEEEEcCCC
Q 027248           89 KIDVVVSNAAA   99 (226)
Q Consensus        89 ~id~li~nag~   99 (226)
                      .+|.++++.|.
T Consensus       208 ~~d~v~~~~g~  218 (323)
T cd08241         208 GVDVVYDPVGG  218 (323)
T ss_pred             CcEEEEECccH
Confidence            69999988774

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>PRK12335 tellurite resistance protein TehB; Provisional

Probab=95.87  E-value=0.2  Score=41.35  Aligned_cols=105  Identities=11%  Similarity=0.146  Sum_probs=67.9

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      ++++++|=.|++.|.   .+..|++.|++|+.++.++..++.+.+.....+.++.+...|+.+...           -+.
T Consensus       119 ~~~~~vLDlGcG~G~---~~~~la~~g~~V~avD~s~~ai~~~~~~~~~~~l~v~~~~~D~~~~~~-----------~~~  184 (287)
T PRK12335        119 VKPGKALDLGCGQGR---NSLYLALLGFDVTAVDINQQSLENLQEIAEKENLNIRTGLYDINSASI-----------QEE  184 (287)
T ss_pred             cCCCCEEEeCCCCCH---HHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCceEEEEechhcccc-----------cCC
Confidence            456789999987665   455666789999999999988887766666656567777777654221           248


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEe
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~s  146 (226)
                      +|+++.+.-...       .+.+++..           +.+.+...++.+|.++++.
T Consensus       185 fD~I~~~~vl~~-------l~~~~~~~-----------~l~~~~~~LkpgG~~l~v~  223 (287)
T PRK12335        185 YDFILSTVVLMF-------LNRERIPA-----------IIKNMQEHTNPGGYNLIVC  223 (287)
T ss_pred             ccEEEEcchhhh-------CCHHHHHH-----------HHHHHHHhcCCCcEEEEEE
Confidence            999987763321       22233332           2445556667788755543

>PRK14901 16S rRNA methyltransferase B; Provisional

Probab=95.86  E-value=0.23  Score=43.60  Aligned_cols=126  Identities=17%  Similarity=0.225  Sum_probs=77.3

Q ss_pred             CCCEEEEEcC-CCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCC-cEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248           11 QGKVAIVTAS-TQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI-EVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus        11 ~gk~vlItGa-~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      .|.+++=.|+ +||....+++.+... .+|+.++.++..++.+.+.+...+. ++.++..|.++.....      ....+
T Consensus       252 ~g~~VLDl~ag~G~kt~~la~~~~~~-g~v~a~D~~~~rl~~~~~n~~r~g~~~v~~~~~D~~~~~~~~------~~~~~  324 (434)
T PRK14901        252 PGEVILDACAAPGGKTTHIAELMGDQ-GEIWAVDRSASRLKKLQENAQRLGLKSIKILAADSRNLLELK------PQWRG  324 (434)
T ss_pred             CcCEEEEeCCCCchhHHHHHHHhCCC-ceEEEEcCCHHHHHHHHHHHHHcCCCeEEEEeCChhhccccc------ccccc
Confidence            4667776665 477788887765433 4899999999999888888877664 4677777765432110      00124


Q ss_pred             CCCEEEEcCCCCCCCCcccc-------ccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEecc
Q 027248           89 KIDVVVSNAAANPSVDSILQ-------TKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~-------~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~  148 (226)
                      .+|.++.++-..+ .+.+..       .+.+++.+..    .-...++..+...++++|++|+.+.+
T Consensus       325 ~fD~Vl~DaPCSg-~G~~~r~p~~~~~~~~~~~~~l~----~~Q~~iL~~a~~~lkpgG~lvystcs  386 (434)
T PRK14901        325 YFDRILLDAPCSG-LGTLHRHPDARWRQTPEKIQELA----PLQAELLESLAPLLKPGGTLVYATCT  386 (434)
T ss_pred             cCCEEEEeCCCCc-ccccccCcchhhhCCHHHHHHHH----HHHHHHHHHHHHhcCCCCEEEEEeCC
Confidence            7899988764332 122111       2223332221    12356677777888889999886533

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	226
3o4r_A	261	Crystal Structure Of Human DehydrogenaseREDUCTASE (		6e-36
2zat_A	260	Crystal Structure Of A Mammalian Reductase Length =		4e-34
2ae2_A	260	Tropinone Reductase-Ii Complexed With Nadp+ And Pse		5e-15
1ipe_A	259	Tropinone Reductase-Ii Complexed With Nadph Length		1e-14
1ae1_A	273	Tropinone Reductase-I Complex With Nadp Length = 27		8e-14
2uvd_A	246	The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier		1e-13
1zem_A	262	Crystal Structure Of Nad+-Bound Xylitol Dehydrogena		3e-13
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		1e-12
3sj7_A	252	Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F		2e-12
3gaf_A	256	2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid De		3e-12
2y93_A	281	Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2		3e-12
2hq1_A	247	Crystal Structure Of Orf 1438 A Putative GlucoseRIB		1e-11
3ai1_A	263	The Crystal Structure Of L-Sorbose Reductase From G		1e-11
1spx_A	278	Crystal Structure Of Glucose Dehydrogenase Of Caeno		1e-11
4fgs_A	273	Crystal Structure Of A Probable Dehydrogenase Prote		1e-11
3ai3_A	263	The Crystal Structure Of L-Sorbose Reductase From G		3e-11
1xkq_A	280	Crystal Structure Of Short-Chain DehydrogenaseREDUC		4e-11
3edm_A	259	Crystal Structure Of A Short Chain Dehydrogenase Fr		4e-11
3osu_A	246	Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro		8e-11
1xhl_A	297	Crystal Structure Of Putative Tropinone Reductase-I		2e-10
3pk0_A	262	Crystal Structure Of Short-Chain DehydrogenaseREDUC		2e-10
3rkr_A	262	Crystal Structure Of A Metagenomic Short-Chain Oxid		2e-10
1xq1_A	266	X-Ray Structure Of Putative Tropinone Reducatse Fro		3e-10
3is3_A	270	Crystal Structure Of 17beta-Hydroxysteroid Dehydrog		4e-10
3itd_A	270	Crystal Structure Of An Inactive 17beta-Hydroxyster		4e-10
3tjr_A	301	Crystal Structure Of A Rv0851c Ortholog Short Chain		1e-09
3o38_A	266	Crystal Structure Of A Short Chain Dehydrogenase Fr		2e-09
1bdb_A	277	Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From		2e-09
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		2e-09
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		2e-09
3csd_B	281	Actinorhodin Polyketide Ketoreductase Mutant P94l B		2e-09
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		2e-09
2rhr_B	277	P94l Actinorhodin Ketordeuctase Mutant, With Nadph		2e-09
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		2e-09
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		3e-09
2pnf_A	248	Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-		3e-09
3ftp_A	270	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		4e-09
3u5t_A	267	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		6e-09
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		8e-09
1ja9_A	274	Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalen		8e-09
1yxm_A	303	Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa		9e-09
3oic_A	258	Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl		1e-08
3gvc_A	277	Crystal Structure Of Probable Short-Chain Dehydroge		2e-08
4eso_A	255	Crystal Structure Of A Putative Oxidoreductase Prot		2e-08
3vc7_A	254	Crystal Structure Of A Putative Oxidoreductase From		2e-08
3afm_A	258	Crystal Structure Of Aldose Reductase A1-R Responsi		2e-08
1ybv_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		5e-08
1doh_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		5e-08
3v2g_A	271	Crystal Structure Of A DehydrogenaseREDUCTASE FROM		7e-08
3qiv_A	253	Crystal Structure Of A Putative Short-Chain Dehydro		1e-07
3i3o_A	291	2.06 Angstrom Resolution Crystal Structure Of A Sho		1e-07
3tfo_A	264	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car		1e-07
3ijr_A	291	2.05 Angstrom Resolution Crystal Structure Of A Sho		2e-07
3t4x_A	267	Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDU		2e-07
3f9i_A	249	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-07
2c07_A	285	Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng		2e-07
3r3s_A	294	Structure Of The Ygha Oxidoreductase From Salmonell		3e-07
3awd_A	260	Crystal Structure Of Gox2181 Length = 260		3e-07
1gee_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant Q		3e-07
1gco_A	261	Crystal Structure Of Glucose Dehydrogenase Complexe		3e-07
1rwb_A	261	Cooperative Effect Of Two Surface Amino Acid Mutati		3e-07
1g6k_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant E		3e-07
1ahi_A	255	7 Alpha-Hydroxysteroid Dehydrogenase Complexed With		4e-07
2gdz_A	267	Crystal Structure Of 15-Hydroxyprostaglandin Dehydr		4e-07
3cxr_A	291	Crystal Structure Of Gluconate 5-Dehydrogase From S		5e-07
3rih_A	293	Crystal Structure Of A Putative Short Chain Dehydro		6e-07
3tsc_A	277	Crystal Structure Of Short Chain Dehydrogenase Map_		9e-07
3v8b_A	283	Crystal Structure Of A 3-Ketoacyl-Acp Reductase Fro		1e-06
3icc_A	255	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Car		2e-06
3tzq_B	271	Crystal Structure Of A Short-Chain Type Dehydrogena		2e-06
3ctm_A	279	Crystal Structure Of A Carbonyl Reductase From Cand		2e-06
1zjy_A	251	Structure Of R-Specific Alcohol Dehydrogenase (Muta		2e-06
1nxq_A	251	Crystal Structure Of R-Alcohol Dehydrogenase (Radh)		2e-06
3r1i_A	276	Crystal Structure Of A Short-Chain Type Dehydrogena		2e-06
3n74_A	261	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-06
3sju_A	279	Hedamycin Polyketide Ketoreductase Bound To Nadph L		3e-06
3ak4_A	263	Crystal Structure Of Nadh-Dependent Quinuclidinone		3e-06
1i01_A	244	Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr		3e-06
3t7c_A	299	Crystal Structure Of Carveol Dehydrogenase From Myc		4e-06
3ioy_A	319	Structure Of Putative Short-Chain Dehydrogenase (Sa		4e-06
4fn4_A	254	Short-chain Nad(h)-dependent Dehydrogenase/reductas		4e-06
1geg_A	256	Cryatal Structure Analysis Of Meso-2,3-Butanediol D		5e-06
2ew8_A	249	Crystal Structure Of The (s)-specific 1-phenylethan		5e-06
1k2w_A	256	Crystal Structure Of Sorbitol Dehydrogenase From R.		6e-06
1iy8_A	267	Crystal Structure Of Levodione Reductase Length = 2		9e-06
1q7c_A	244	The Structure Of Betaketoacyl-[acp] Reductase Y151f		1e-05
2a4k_A	263	3-Oxoacyl-[acyl Carrier Protein] Reductase From The		1e-05
3vtz_A	269	Structure Of Thermoplasma Volcanium Aldohexose Dehy		1e-05
1y5m_A	276	The Crystal Structure Of Murine 11b-Hydroxysteroid		2e-05
2pd6_A	264	Structure Of Human Hydroxysteroid Dehydrogenase Typ		2e-05
3uwr_A	286	Crystal Structure Of Carveol Dehydrogenase From Myc		2e-05
3uve_A	286	Crystal Structure Of Carveol Dehydrogenase ((+)-Tra		2e-05
1wmb_A	260	Crystal Structure Of Nad Dependent D-3-Hydroxybutyl		2e-05
2ztu_A	260	T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase C		3e-05
2ztm_A	260	T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase L		3e-05
4afn_A	269	Crystal Structure Of 3-ketoacyl-(acyl-carrier-prote		3e-05
3tox_A	280	Crystal Structure Of A Short Chain Dehydrogenase In		4e-05
3kzv_A	254	The Crystal Structure Of A Cytoplasmic Protein With		5e-05
4dqx_A	277	Crystal Structure Of A Short Chain Dehydrogenase Fr		5e-05
1edo_A	244	The X-Ray Structure Of Beta-Keto Acyl Carrier Prote		6e-05
3kvo_A	346	Crystal Structure Of The Catalytic Domain Of Human		7e-05
4g81_D	255	Crystal Structure Of A Hexonate Dehydrogenase Ortho		7e-05
4imr_A	275	Crystal Structure Of 3-oxoacyl (acyl-carrier-protei		8e-05
3oec_A	317	Crystal Structure Of Carveol Dehydrogenase From Myc		1e-04
3a28_C	258	Crystal Structure Of L-2,3-Butanediol Dehydrogenase		1e-04
3tzk_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-04
3gdf_A	267	Crystal Structure Of The Nadp-Dependent Mannitol De		1e-04
4e6p_A	259	Crystal Structure Of A Probable Sorbitol Dehydrogen		1e-04
1xse_A	295	Crystal Structure Of Guinea Pig 11beta-Hydroxystero		1e-04
3gmd_A	264	Structure-Based Design Of 7-Azaindole-Pyrrolidines		1e-04
3lz6_A	263	Guinea Pig 11beta Hydroxysteroid Dehydrogenase With		2e-04
3rsh_A	251	Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc		2e-04
3u09_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-04
3g49_A	277	N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b-		2e-04
3dwf_A	276	Crystal Structure Of The Guinea Pig 11beta-Hydroxys		2e-04
1xg5_A	279	Structure Of Human Putative Dehydrogenase Mgc4172 I		2e-04
3pgx_A	280	Crystal Structure Of A Putative Carveol Dehydrogena		3e-04
3emk_A	246	2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		5e-04
3lyl_A	247	Structure Of 3-Oxoacyl-Acylcarrier Protein Reductas		5e-04
3tzc_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		5e-04
3enn_A	249	2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		6e-04
1x1e_A	239	Crystal Structure Of Tt0495 Protein From Thermus Th		8e-04
2b4q_A	276	Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex		9e-04

>pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261

Iteration: 1
 Score =  147 bits (370), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 82/205 (40%), Positives = 110/205 (53%), Gaps = 5/205 (2%)
Query: 1   MEKMKMAKR--FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA 58
           M    M +R     KVA+VTAST GIGF IA RL  +GA VVVSSRKQ+NVD+AV  L+ 
Sbjct: 2   MASSGMTRRDPLANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQG 61
Query: 59  RGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLW 118
            G+ V G VCHV   + R+ L+   ++  G I               I+   E V DK  
Sbjct: 62  EGLSVTGTVCHVGKAEDRERLVATAVKLHGGIDILVSNAAVNPFFGSIMDVTEEVWDKTL 121
Query: 119 DINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXX 176
           DINVK+  L+ +   P ++K  G SVV++SSIA + P    + Y V              
Sbjct: 122 DINVKAPALMTKAVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAI 181
Query: 177 EMAP-DTRVNCVAPGFVPTHFAEYI 200
           E+AP + RVNC+APG + T F+  +
Sbjct: 182 ELAPRNIRVNCLAPGLIKTSFSRML 206

>pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase Length = 260

Iteration: 1
 Score =  140 bits (354), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 73/196 (37%), Positives = 108/196 (55%), Gaps = 3/196 (1%)
Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
           K  + KVA+VTAST GIG  IA RL  +GA VVVSSRKQ+NVD  V  L+  G+ V G V
Sbjct: 10  KPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTV 69
Query: 68  CHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSIL 127
           CHV   + R+ L+   +   G +               I+   E V DK+  +NVK+++L
Sbjct: 70  CHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVL 129
Query: 128 LLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTRV 184
           + +   P ++K  G SV+++SS+  Y P  ++  Y V              E+AP + RV
Sbjct: 130 MTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNIRV 189
Query: 185 NCVAPGFVPTHFAEYI 200
           NC+APG + T+F++ +
Sbjct: 190 NCLAPGLIKTNFSQVL 205

>pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260

Iteration: 1
 Score = 77.8 bits (190), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 61/199 (30%), Positives = 92/199 (46%), Gaps = 7/199 (3%)
Query: 6   MAKRF--QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV 63
           MA R+  +G  A+VT  ++GIG+GI E L   GASV   SR QK +++ + + +++G +V
Sbjct: 1   MAGRWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKV 60
Query: 64  IGVVCHVSNGQQRKNLINQTIEKF-GKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINV 122
              VC +S+  +R+ L+N     F GK+                  T E     +  IN 
Sbjct: 61  EASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVED-YSLIMSINF 119
Query: 123 KSSILLLQDAAPHLQKGS--SVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP 180
           +++  L   A P L+     +VV ISS++G       A+YG               E A 
Sbjct: 120 EAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAK 179
Query: 181 DT-RVNCVAPGFVPTHFAE 198
           D  RVN V PG + T   E
Sbjct: 180 DNIRVNGVGPGVIATSLVE 198

>pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/193 (30%), Positives = 88/193 (45%), Gaps = 5/193 (2%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
            +G  A+VT  ++GIG+GI E L   GASV   SR QK +++ + + +++G +V   VC 
Sbjct: 6   LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCD 65
Query: 70  VSNGQQRKNLINQTIEKF-GKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILL 128
           +S+  +R+ L+N     F GK+                  T E     +  IN +++  L
Sbjct: 66  LSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVED-YSLIMSINFEAAYHL 124
Query: 129 LQDAAPHLQKGS--SVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPDT-RVN 185
              A P L+     +VV ISS++G       A+YG               E A D  RVN
Sbjct: 125 SVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVN 184
Query: 186 CVAPGFVPTHFAE 198
            V PG + T   E
Sbjct: 185 GVGPGVIATSLVE 197

>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273

Iteration: 1
 Score = 73.6 bits (179), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 91/197 (46%), Gaps = 13/197 (6%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
            +G  A+VT  ++GIG+ I E L   GA V   SR +K +DE +   + +G+ V G VC 
Sbjct: 19  LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCD 78
Query: 70  VSNGQQRKNLINQTIEKF-GKIXXXXXXXXXXXXXXXILQTKESVLDKLWDI----NVKS 124
           + +  +R  L+      F GK+               I +  +   +K ++I    N ++
Sbjct: 79  LLSRTERDKLMQTVAHVFDGKL-----NILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEA 133
Query: 125 SILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPDT 182
           +  L Q A P L+  +  +V+ +SSIAG+    S+++Y                E A D 
Sbjct: 134 AYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDN 193
Query: 183 -RVNCVAPGFVPTHFAE 198
            RVN VAPG + T   E
Sbjct: 194 IRVNSVAPGVILTPLVE 210

>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 95/198 (47%), Gaps = 5/198 (2%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGVVC 68
            +GKVA+VT +++GIG  IA  L  +GA+VVV+ +  ++  +E V ++K  G + I V  
Sbjct: 2   LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRA 61
Query: 69  HVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILL 128
            V+N +   N++ QT++ FG++               +++ KE   D + + N+K   L 
Sbjct: 62  DVANAEDVTNMVKQTVDVFGQV-DILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLC 120
Query: 129 LQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTRVN 185
            +  +  +  Q+   +V I+S+ G       A Y                E+A  +  VN
Sbjct: 121 TKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTSAKELASRNITVN 180
Query: 186 CVAPGFVPTHFAEYITSN 203
            +APGF+ T   + +  N
Sbjct: 181 AIAPGFIATDMTDVLDEN 198

>pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase Length = 262

Iteration: 1
 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 88/194 (45%), Gaps = 3/194 (1%)
Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
           M+K+F GKV +VT +   IG   A RL  EG ++ +    ++ +++A   ++ +G+E   
Sbjct: 1   MSKKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARS 60
Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSS 125
            VC V++ +     ++  +  FGKI               +         ++  INV  +
Sbjct: 61  YVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGA 120
Query: 126 ILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DT 182
             +L+  +  +  Q    +V  +S+AG +   +MA YG               ++AP + 
Sbjct: 121 FHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNI 180
Query: 183 RVNCVAPGFVPTHF 196
           RVN ++PG++   F
Sbjct: 181 RVNAISPGYMGPGF 194

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score = 69.3 bits (168), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 38/88 (43%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIE 62
           MK     +G+VA+VT  ++G+GFGIA+ L   G SVVV+SR  +   EA  KL  + G+E
Sbjct: 13  MKEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVE 72
Query: 63  VIGVVCHVSNGQQRKNLINQTIEKFGKI 90
            +   C VSN ++ K L+    EKFGK+
Sbjct: 73  TMAFRCDVSNYEEVKKLLEAVKEKFGKL 100

>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252

Iteration: 1
 Score = 68.6 bits (166), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 92/193 (47%), Gaps = 5/193 (2%)
Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVV-KLKARGIEVIGVVCHVS 71
           K A+VT +++GIG  IA +L  EG +V V+    K   EAVV ++KA+G++   +  +V+
Sbjct: 11  KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVA 70
Query: 72  NGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLLQD 131
           +  + K +I + + +FG +               +++ KE   D + D N+K     +Q 
Sbjct: 71  DADEVKAMIKEVVSQFGSL-DVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQK 129
Query: 132 AAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNCVA 188
           A P +  Q+  +++ +SS+ G       A Y                E+A     VN VA
Sbjct: 130 ATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVA 189
Query: 189 PGFVPTHFAEYIT 201
           PGF+ +   + ++
Sbjct: 190 PGFIVSDMTDALS 202

>pdb|3GAF|A Chain A, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid Dehydrogenase From Brucella Melitensis Length = 256

Iteration: 1
 Score = 68.6 bits (166), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 58/184 (31%), Positives = 87/184 (47%), Gaps = 5/184 (2%)
Query: 14  VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNG 73
           VAIVT +  GIG  IA      GASVVV+  K +  +     ++  G + IG+ C+V++ 
Sbjct: 14  VAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDE 73
Query: 74  QQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLLQDAA 133
           Q R+ +I   +++FGKI                     S  +  + +N+ S   L Q AA
Sbjct: 74  QHREAVIKAALDQFGKITVLVNNAGGGGPKP--FDMPMSDFEWAFKLNLFSLFRLSQLAA 131
Query: 134 PHLQK--GSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNCVAPG 190
           PH+QK  G +++ ISS+AG      MA YG               ++ P   RVN +APG
Sbjct: 132 PHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPG 191
Query: 191 FVPT 194
            + T
Sbjct: 192 AIKT 195

>pdb|2Y93|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3- Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain B-356. Length = 281

Iteration: 1
 Score = 68.2 bits (165), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 80/188 (42%), Gaps = 10/188 (5%)
Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
           +  G+VA++T    G+G  + +R   EGA V V  +  + + E  V   A G   +GVV 
Sbjct: 2   KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEV---AHGGNAVGVVG 58
Query: 69  HVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWD----INVKS 124
            V + Q +K    + +  FGKI               +    E  +D  +D    +NVK 
Sbjct: 59  DVRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKG 118
Query: 125 SILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPDT 182
            I  ++   P L   +GS V  IS+ AG+ P     +Y                E+AP  
Sbjct: 119 YIHAVKACLPALVSSRGSVVFTISN-AGFYPNGGGPLYTATKHAVVGLVRQMAFELAPHV 177
Query: 183 RVNCVAPG 190
           RVN VAPG
Sbjct: 178 RVNGVAPG 185

>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 90/196 (45%), Gaps = 5/196 (2%)
Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGVV 67
           + +GK AIVT S++G+G  IA +LG  GA++V++ S    ++D    + KA GI V+   
Sbjct: 2   QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAK 61
Query: 68  CHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSIL 127
             V N +  +N++   ++ FG+I               +L+  E   D + + N+KS+ L
Sbjct: 62  GDVKNPEDVENMVKTAMDAFGRI-DILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYL 120
Query: 128 LLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPD-TRV 184
             +  +  +  QK   ++ I+SIAG    +  A Y                E A      
Sbjct: 121 CTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKAGLIGFTKSIAKEFAAKGIYC 180
Query: 185 NCVAPGFVPTHFAEYI 200
           N VAPG + T   + +
Sbjct: 181 NAVAPGIIKTDMTDVL 196

>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 83/188 (44%), Gaps = 5/188 (2%)
Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCH 69
            GKVA++T S+ GIG  IAE    EGA +V+ +R+   + EA   LK + G+ V+ V   
Sbjct: 6   SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVD 65
Query: 70  VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLL 129
           V+  +    ++      FG                 I++  +      W+++V +++ L 
Sbjct: 66  VATPEGVDAVVESVRSSFGG-ADILVNNAGTGSNETIMEAADEKWQFYWELHVMAAVRLA 124
Query: 130 QDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPDT-RVNC 186
           +   P ++   G +++  +SI   QP     +Y V              E+  D  RVNC
Sbjct: 125 RGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIRVNC 184
Query: 187 VAPGFVPT 194
           + PG + T
Sbjct: 185 INPGLILT 192

>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 88/199 (44%), Gaps = 13/199 (6%)
Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIE---VIG 65
           RF  KVAI+T S+ GIG   A     EGA V ++ R  + ++E   ++ A G+    V  
Sbjct: 3   RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNS 62
Query: 66  VVCHVSNGQQRKNLINQTIEKFGK----IXXXXXXXXXXXXXXXILQTKESVLDKLWDIN 121
           VV  V+    +  +++ T+ KFGK    +                 Q+ ES  D   ++N
Sbjct: 63  VVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIES-YDATLNLN 121
Query: 122 VKSSILLLQDAAPHLQ--KGSSVVLISSIA-GYQPQSSMAMYGVXXXXXXXXXXXXXXEM 178
           ++S I L + A PHL   KG  +V ISSIA G         Y +              ++
Sbjct: 122 LRSVIALTKKAVPHLSSTKG-EIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDL 180
Query: 179 APD-TRVNCVAPGFVPTHF 196
                RVN ++PG V T F
Sbjct: 181 IQHGIRVNSISPGLVATGF 199

>pdb|4FGS|A Chain A, Crystal Structure Of A Probable Dehydrogenase Protein Length = 273

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 85/189 (44%), Gaps = 7/189 (3%)
Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
           +R   K+A++T +T GIG   A+R   EGA V ++ R++  +D A+ ++   G   +G+ 
Sbjct: 25  QRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI---GGGAVGIQ 81
Query: 68  CHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSIL 127
              +N  +   L  +   + G+I               + +  E   D  +D NVK  + 
Sbjct: 82  ADSANLAELDRLYEKVKAEAGRI-DVLFVNAGGGSXLPLGEVTEEQYDDTFDRNVKGVLF 140
Query: 128 LLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNC 186
            +Q A P L +GSSVVL  S AG     + ++Y                ++     R+N 
Sbjct: 141 TVQKALPLLARGSSVVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDLKDRGIRINT 200
Query: 187 VAPGFVPTH 195
           ++PG  PT 
Sbjct: 201 LSPG--PTE 207

>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263

Iteration: 1
 Score = 65.1 bits (157), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 82/188 (43%), Gaps = 5/188 (2%)
Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCH 69
            GKVA++T S+ GIG  IAE    EGA +V+ +R+   + EA   LK + G+ V+ V   
Sbjct: 6   SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVD 65
Query: 70  VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLL 129
           V+  +    ++      FG                 I++  +      W++ V +++ L 
Sbjct: 66  VATPEGVDAVVESVRSSFGG-ADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLA 124
Query: 130 QDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPDT-RVNC 186
           +   P ++   G +++  +SI   QP     +Y V              E+  D  RVNC
Sbjct: 125 RGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIRVNC 184
Query: 187 VAPGFVPT 194
           + PG + T
Sbjct: 185 INPGLILT 192

>pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF Unknown Function From Caenorhabditis Elegans With Cofactor Length = 280

Iteration: 1
 Score = 64.7 bits (156), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 85/197 (43%), Gaps = 9/197 (4%)
Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI---EVIG 65
           RF  K  I+T S+ GIG   A     EGA+V ++ R  + ++E    +   G+   +V  
Sbjct: 3   RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNS 62
Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLD---KLWDINV 122
           VV  V+    +  +IN T+++FGKI                    +  +D   K   +N+
Sbjct: 63  VVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNL 122
Query: 123 KSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP 180
           ++ I + +   PHL   KG  V + S +AG Q Q     Y +              ++A 
Sbjct: 123 QAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAK 182
Query: 181 -DTRVNCVAPGFVPTHF 196
              RVN V+PG V T F
Sbjct: 183 FGIRVNSVSPGMVETGF 199

>pdb|3EDM|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Agrobacterium Tumefaciens Length = 259

Iteration: 1
 Score = 64.7 bits (156), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 85/196 (43%), Gaps = 2/196 (1%)
Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGV 66
           +RF  +  +V  + + IG   A R   EGA+VV++ +   +    AV +++  G   + +
Sbjct: 4   QRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAI 63
Query: 67  VCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSI 126
              ++N  + +  I+   +KFG+I               I +  E+   ++ D+N+ S  
Sbjct: 64  KADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLF 123
Query: 127 LLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAM-YGVXXXXXXXXXXXXXXEMAPDTRVN 185
           L  + A P + KG ++V  SS AG       A+ Y                E+ P  RVN
Sbjct: 124 LTAKTALPKMAKGGAIVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAKEVGPKIRVN 183
Query: 186 CVAPGFVPTHFAEYIT 201
            V PG + T F +  T
Sbjct: 184 AVCPGMISTTFHDTFT 199

>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246

Iteration: 1
 Score = 63.5 bits (153), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 89/193 (46%), Gaps = 5/193 (2%)
Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVV-KLKARGIEVIGVVCHVS 71
           K A+VT +++GIG  IA +L  EG +V V+    K   EAVV ++KA+G++   +  +V+
Sbjct: 5   KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVA 64
Query: 72  NGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLLQD 131
           +  + K  I + + +FG +               + + KE   D + D N+K     +Q 
Sbjct: 65  DADEVKAXIKEVVSQFGSL-DVLVNNAGITRDNLLXRXKEQEWDDVIDTNLKGVFNCIQK 123
Query: 132 AAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNCVA 188
           A P    Q+  +++ +SS+ G       A Y                E+A     VN VA
Sbjct: 124 ATPQXLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVA 183
Query: 189 PGFVPTHFAEYIT 201
           PGF+ +   + ++
Sbjct: 184 PGFIVSDXTDALS 196

>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 83/196 (42%), Gaps = 9/196 (4%)
Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI---EVIG 65
           RF GK  I+T S+ GIG   A     EGA V ++ R +  ++E   ++   G+   ++  
Sbjct: 23  RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINA 82
Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESV--LDKLWDINVK 123
           VV  V+    + ++IN T+ KFGKI                  T + V    K + +N +
Sbjct: 83  VVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGT-ANTDQPVELYQKTFKLNFQ 141
Query: 124 SSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPD 181
           + I + Q    HL   KG  V + S +AG Q  S    Y                ++   
Sbjct: 142 AVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQH 201
Query: 182 -TRVNCVAPGFVPTHF 196
             RVN V+PG V T F
Sbjct: 202 GVRVNSVSPGAVATGF 217

>pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 84/203 (41%), Gaps = 11/203 (5%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI-EVIGVVC 68
            QG+  +VT  T+GIG GIA      GA+V V+ R   ++D  V  L   G  +VIGV  
Sbjct: 8   LQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQT 67
Query: 69  HVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILL 128
            VS+  Q   L  + +E+FG I                  T E  L+ ++ +NV  +   
Sbjct: 68  DVSDRAQCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQ-LNGIFAVNVNGTFYA 126
Query: 129 LQDAAPHLQKGSS--VVLISSIAG-YQPQSSMAMYGVXXXXXXXXXXXXXXEMAPD-TRV 184
           +Q     L    S  VVL SSI G        + YG               E+AP    V
Sbjct: 127 VQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAAIELAPHKITV 186
Query: 185 NCVAPGFVPT-----HFAEYITS 202
           N + PG + T     +  EYI S
Sbjct: 187 NAIMPGNIMTEGLLENGEEYIAS 209

>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 83/195 (42%), Gaps = 3/195 (1%)
Query: 5   KMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVI 64
           K      G+VA+VT +++GIG  IA +LG  GA VV+++R  + +     ++ A G E  
Sbjct: 22  KHMSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAE 81
Query: 65  GVVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKS 124
              C +S+           +   G+                +   K +  D L  +N+K+
Sbjct: 82  SHACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKA 141
Query: 125 SILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-D 181
             LLL+  AP +   K   ++ ISS+AG  P +  A Y                E+    
Sbjct: 142 PYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKWGLNGLMTSAAEELRQHQ 201
Query: 182 TRVNCVAPGFVPTHF 196
            RV+ VAPG V T F
Sbjct: 202 VRVSLVAPGSVRTEF 216

>pdb|1XQ1|A Chain A, X-Ray Structure Of Putative Tropinone Reducatse From Arabidopsis Thaliana Gene At1g07440 Length = 266

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 84/199 (42%), Gaps = 5/199 (2%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
            + K  +VT  T+GIG  I E     GA +   +R +  ++E + K + +G +V G VC 
Sbjct: 12  LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCD 71
Query: 70  VSNGQQRKNLINQTIEKF-GKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILL 128
            S   +R+ L+      F GK+               +  T E     +   N++S+  L
Sbjct: 72  ASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHI-STNLESAYHL 130
Query: 129 LQDAAPHLQKG--SSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPD-TRVN 185
            Q A P L+     +++ +SSIAG    S  ++Y                E A D  R N
Sbjct: 131 SQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRAN 190
Query: 186 CVAPGFVPTHFAEYITSND 204
            VAP  + T  AE +  ++
Sbjct: 191 AVAPAVIATPLAEAVYDDE 209

>pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase (Apo Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 61.2 bits (147), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 69/140 (49%), Gaps = 2/140 (1%)
Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGVV 67
           R  GKVA+VT S +GIG  +A  LG  GA VVV+ +   K+ ++ V ++KA G + I + 
Sbjct: 15  RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIK 74
Query: 68  CHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSIL 127
             +    +   L +Q +  FG +                  T+E   D+++ +N +    
Sbjct: 75  ADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEE-FDRVFSLNTRGQFF 133
Query: 128 LLQDAAPHLQKGSSVVLISS 147
           + ++A  HL +G  +VL SS
Sbjct: 134 VAREAYRHLTEGGRIVLTSS 153

>pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid Dehydrogenase (Y167f Mutated Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 61.2 bits (147), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 69/140 (49%), Gaps = 2/140 (1%)
Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGVV 67
           R  GKVA+VT S +GIG  +A  LG  GA VVV+ +   K+ ++ V ++KA G + I + 
Sbjct: 15  RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIK 74
Query: 68  CHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSIL 127
             +    +   L +Q +  FG +                  T+E   D+++ +N +    
Sbjct: 75  ADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEE-FDRVFSLNTRGQFF 133
Query: 128 LLQDAAPHLQKGSSVVLISS 147
           + ++A  HL +G  +VL SS
Sbjct: 134 VAREAYRHLTEGGRIVLTSS 153

>pdb|3TJR|A Chain A, Crystal Structure Of A Rv0851c Ortholog Short Chain Dehydrogenase From Mycobacterium Paratuberculosis Length = 301

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 66/158 (41%), Gaps = 8/158 (5%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
           F G+ A+VT    GIG   A      GA +V+S   Q  +++AV  L+ +G +  GVVC 
Sbjct: 29  FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCD 88
Query: 70  VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLW--DINVKSSIL 127
           V +  +   L ++     G +                    +   D  W  DI++  SI 
Sbjct: 89  VRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHD---DWRWVIDIDLWGSIH 145
Query: 128 LLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGV 162
            ++   P L +   G  +   +S AG  P + +  YGV
Sbjct: 146 AVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGV 183

>pdb|3O38|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 89/201 (44%), Gaps = 7/201 (3%)
Query: 10  FQGKVAIVTAST-QGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI-EVIGVV 67
            +GKV +VTA+   GIG   A R  LEGA VV+S   ++ + E   +L   G+  V  VV
Sbjct: 20  LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVV 79
Query: 68  CHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSIL 127
           C V++ +    LI QT+EK G++               +  T E   D++ ++ + S + 
Sbjct: 80  CDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEE-WDRVLNVTLTSVMR 138
Query: 128 LLQDAAPHLQ---KGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTR 183
             + A  + +    G  +V  +S+ G++ Q S + Y                E      R
Sbjct: 139 ATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIEAVEFGVR 198
Query: 184 VNCVAPGFVPTHFAEYITSND 204
           +N V+P      F E  +S++
Sbjct: 199 INAVSPSIARHKFLEKTSSSE 219

>pdb|1BDB|A Chain A, Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From Pseudomonas Sp. Lb400 Length = 277

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 79/188 (42%), Gaps = 10/188 (5%)
Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
           + +G+  ++T    G+G  + +R   EGA V V  +  + + E        G  V+G+V 
Sbjct: 2   KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETD---HGDNVLGIVG 58
Query: 69  HVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWD----INVKS 124
            V + + +K   ++ + +FGKI               ++   E  LD  +D    INVK 
Sbjct: 59  DVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKG 118
Query: 125 SILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPDT 182
            I  ++   P L   +G+ +  IS+ AG+ P     +Y                E+AP  
Sbjct: 119 YIHAVKACLPALVASRGNVIFTISN-AGFYPNGGGPLYTAAKHAIVGLVRELAFELAPYV 177
Query: 183 RVNCVAPG 190
           RVN V  G
Sbjct: 178 RVNGVGSG 185

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 85/194 (43%), Gaps = 14/194 (7%)
Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           +VA+VT +T GIG  IA RLG EG  V V +R ++ +   + +L+  G+E  G  C V +
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 86
Query: 73  GQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLW----DINVKSSILL 128
             + + L+   +E++G +                  T E + D+LW    + N+     +
Sbjct: 87  VPEIEALVAAVVERYGPVDVLVNNAGRPGGGA----TAE-LADELWLDVVETNLTGVFRV 141
Query: 129 LQD---AAPHLQKGSS-VVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMA-PDTR 183
            +    A   L++G+  +V I+S  G Q     A Y                E+A     
Sbjct: 142 TKQVLKAGGMLERGTGRIVNIASTGGKQGLVHAAPYSASKHGVVGFTKALGLELARTGIT 201
Query: 184 VNCVAPGFVPTHFA 197
           VN V PGFV T  A
Sbjct: 202 VNAVCPGFVETPMA 215

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 85/194 (43%), Gaps = 14/194 (7%)
Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           +VA+VT +T GIG  IA RLG EG  V V +R ++ +   + +L+  G+E  G  C V +
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 86
Query: 73  GQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLW----DINVKSSILL 128
             + + L+   +E++G +                  T E + D+LW    + N+     +
Sbjct: 87  VPEIEALVAAVVERYGPVDVLVNNAGRPGGGA----TAE-LADELWLDVVETNLTGVFRV 141
Query: 129 LQD---AAPHLQKGSS-VVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMA-PDTR 183
            +    A   L++G+  +V I+S  G Q     A Y                E+A     
Sbjct: 142 TKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGIT 201
Query: 184 VNCVAPGFVPTHFA 197
           VN V PGFV T  A
Sbjct: 202 VNAVCPGFVETPMA 215

>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 85/194 (43%), Gaps = 14/194 (7%)
Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           +VA+VT +T GIG  IA RLG EG  V V +R ++ +   + +L+  G+E  G  C V +
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 86
Query: 73  GQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLW----DINVKSSILL 128
             + + L+   +E++G +                  T E + D+LW    + N+     +
Sbjct: 87  VPEIEALVAAVVERYGPVDVLVNNAGRLGGGA----TAE-LADELWLDVVETNLTGVFRV 141
Query: 129 LQD---AAPHLQKGSS-VVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMA-PDTR 183
            +    A   L++G+  +V I+S  G Q     A Y                E+A     
Sbjct: 142 TKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGIT 201
Query: 184 VNCVAPGFVPTHFA 197
           VN V PGFV T  A
Sbjct: 202 VNAVCPGFVETPMA 215

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 85/194 (43%), Gaps = 14/194 (7%)
Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           +VA+VT +T GIG  IA RLG EG  V V +R ++ +   + +L+  G+E  G  C V +
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 86
Query: 73  GQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLW----DINVKSSILL 128
             + + L+   +E++G +                  T E + D+LW    + N+     +
Sbjct: 87  VPEIEALVAAVVERYGPVDVLVNNAGRPGGGA----TAE-LADELWLDVVETNLTGVFRV 141
Query: 129 LQD---AAPHLQKGSS-VVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMA-PDTR 183
            +    A   L++G+  +V I+S  G Q     A Y                E+A     
Sbjct: 142 TKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGIT 201
Query: 184 VNCVAPGFVPTHFA 197
           VN V PGFV T  A
Sbjct: 202 VNAVCPGFVETPMA 215

>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 85/194 (43%), Gaps = 14/194 (7%)
Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           +VA+VT +T GIG  IA RLG EG  V V +R ++ +   + +L+  G+E  G  C V +
Sbjct: 23  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 82
Query: 73  GQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLW----DINVKSSILL 128
             + + L+   +E++G +                  T E + D+LW    + N+     +
Sbjct: 83  VPEIEALVAAVVERYGPVDVLVNNAGRLGGGA----TAE-LADELWLDVVETNLTGVFRV 137
Query: 129 LQD---AAPHLQKGSS-VVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMA-PDTR 183
            +    A   L++G+  +V I+S  G Q     A Y                E+A     
Sbjct: 138 TKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGIT 197
Query: 184 VNCVAPGFVPTHFA 197
           VN V PGFV T  A
Sbjct: 198 VNAVCPGFVETPMA 211

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 85/194 (43%), Gaps = 14/194 (7%)
Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           +VA+VT +T GIG  IA RLG EG  V V +R ++ +   + +L+  G+E  G  C V +
Sbjct: 23  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 82
Query: 73  GQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLW----DINVKSSILL 128
             + + L+   +E++G +                  T E + D+LW    + N+     +
Sbjct: 83  VPEIEALVAAVVERYGPVDVLVNNAGRPGGGA----TAE-LADELWLDVVETNLTGVFRV 137
Query: 129 LQD---AAPHLQKGSS-VVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMA-PDTR 183
            +    A   L++G+  +V I+S  G Q     A Y                E+A     
Sbjct: 138 TKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGIT 197
Query: 184 VNCVAPGFVPTHFA 197
           VN V PGFV T  A
Sbjct: 198 VNAVCPGFVETPMA 211

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 85/194 (43%), Gaps = 14/194 (7%)
Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           +VA+VT +T GIG  IA RLG EG  V V +R ++ +   + +L+  G+E  G  C V +
Sbjct: 7   EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 66
Query: 73  GQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLW----DINVKSSILL 128
             + + L+   +E++G +                  T E + D+LW    + N+     +
Sbjct: 67  VPEIEALVAAVVERYGPVDVLVNNAGRPGGGA----TAE-LADELWLDVVETNLTGVFRV 121
Query: 129 LQD---AAPHLQKGSS-VVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMA-PDTR 183
            +    A   L++G+  +V I+S  G Q     A Y                E+A     
Sbjct: 122 TKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGIT 181
Query: 184 VNCVAPGFVPTHFA 197
           VN V PGFV T  A
Sbjct: 182 VNAVCPGFVETPMA 195

>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 93/203 (45%), Gaps = 25/203 (12%)
Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVV---SSRKQKNVDEAVVK---LKAR 59
           M  + QGKV++VT ST+GIG  IAE+L   G++V++   S  + K V E +     +KA 
Sbjct: 1   MEIKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAH 60
Query: 60  GIEVIGVVCHVSNGQQRKNLINQTIEK-FGKIXXXXXXXXXXXXXXXILQTKESVLDKLW 118
           G+E + ++   S        IN+  E+ +  +                L  + S+LD  W
Sbjct: 61  GVE-MNLLSEES--------INKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLD--W 109
Query: 119 D----INVKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXX 172
           +    +N+  + L+ Q++   +  Q+   +V ISS+ G+        Y            
Sbjct: 110 EEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTK 169
Query: 173 XXXXEMAP-DTRVNCVAPGFVPT 194
               E+AP +  VN VAPGF+ T
Sbjct: 170 SLAKELAPRNVLVNAVAPGFIET 192

>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 83/195 (42%), Gaps = 6/195 (3%)
Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
           M K    +VAIVT +++GIG  IA  L   GA V+ ++  +   +      K  G+E  G
Sbjct: 22  MDKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRG 81
Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSS 125
            V +V++      L+  T+++FG +                ++ K+   D + D N+K +
Sbjct: 82  AVLNVNDATAVDALVESTLKEFGALNVLVNNAGITQDQLA-MRMKDDEWDAVIDTNLK-A 139
Query: 126 ILLLQDAA--PHLQ-KGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-D 181
           +  L  A   P ++ +G  +V I+S+ G         Y                E+    
Sbjct: 140 VFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAGVAGMTRALAREIGSRG 199
Query: 182 TRVNCVAPGFVPTHF 196
             VNCVAPGF+ T  
Sbjct: 200 ITVNCVAPGFIDTDM 214

>pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Sinorhizobium Meliloti Length = 267

Iteration: 1
 Score = 57.4 bits (137), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 84/186 (45%), Gaps = 3/186 (1%)
Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
           KVAIVT +++GIG  IA RL  +G +VV++ + K    +E   K++A G + +     VS
Sbjct: 28  KVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVS 87
Query: 72  NGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLLQD 131
           +    + L     E FG +               I +T ++V D++  +N+K +   L++
Sbjct: 88  DPAAVRRLFATAEEAFGGV-DVLVNNAGIXPLTTIAETGDAVFDRVIAVNLKGTFNTLRE 146
Query: 132 AAPHLQKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEM-APDTRVNCVAPG 190
           AA  L+ G  ++  S+        S  +Y                E+   D  VN VAPG
Sbjct: 147 AAQRLRVGGRIINXSTSQVGLLHPSYGIYAAAKAGVEAXTHVLSKELRGRDITVNAVAPG 206
Query: 191 FVPTHF 196
              T  
Sbjct: 207 PTATDL 212

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 57.0 bits (136), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 85/194 (43%), Gaps = 14/194 (7%)
Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           +VA+VT +T GIG  IA RLG EG  V V +R ++ +   + +L+  G+E  G  C V +
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 86
Query: 73  GQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLW----DINVKSSILL 128
             + + L+   +E++G +                  T E + D+LW    + N+     +
Sbjct: 87  VPEIEALVAAVVERYGPVDVLVNNAGRPGGGA----TAE-LADELWLDVVETNLTGVFRV 141
Query: 129 LQD---AAPHLQKGSS-VVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMA-PDTR 183
            +    A   L++G+  +V I+S  G Q     A Y                E+A     
Sbjct: 142 TKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGIT 201
Query: 184 VNCVAPGFVPTHFA 197
           VN V PG+V T  A
Sbjct: 202 VNAVCPGWVETPMA 215

>pdb|1JA9|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene Reductase In Complex With Nadph And Pyroquilon Length = 274

Iteration: 1
 Score = 57.0 bits (136), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 87/191 (45%), Gaps = 4/191 (2%)
Query: 7   AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIG 65
           +K   GKVA+ T + +GIG GIA  LG  GASVVV+     K  +E V +LK  G + + 
Sbjct: 16  SKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVA 75
Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSS 125
           +   +S   +   L ++ +  FG +               +  T+E + DK++++N +  
Sbjct: 76  IQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQE-LFDKVFNLNTRGQ 134
Query: 126 ILLLQDAAPHLQKGSSVVLISSIAGYQPQ-SSMAMYGVXXXXXXXXXXXXXXEM-APDTR 183
             + Q    H ++G  ++L SSIA       + A+Y                +  A    
Sbjct: 135 FFVAQQGLKHCRRGGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGVT 194
Query: 184 VNCVAPGFVPT 194
           VNC+APG V T
Sbjct: 195 VNCIAPGGVKT 205

>pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase Length = 303

Iteration: 1
 Score = 57.0 bits (136), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 24/203 (11%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA-----RGIEVI 64
            QG+VAIVT    GIG  I + L   G++VV++SRK + +  A  +L+A     +   VI
Sbjct: 16  LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVI 75
Query: 65  GVVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLW----DI 120
            + C++ N ++  NL+  T++ FGKI                L   E +  K W    + 
Sbjct: 76  PIQCNIRNEEEVNNLVKSTLDTFGKI-----NFLVNNGGGQFLSPAEHISSKGWHAVLET 130
Query: 121 NVKSSILLLQDAAPHLQK--GSSVV--LISSIAGYQPQSSMAMY-GVXXXXXXXXXXXXX 175
           N+  +  + +       K  G S+V  ++ + AG+     +A++ G              
Sbjct: 131 NLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGF----PLAVHSGAARAGVYNLTKSLA 186
Query: 176 XEMA-PDTRVNCVAPGFVPTHFA 197
            E A    R+NCVAPG + +  A
Sbjct: 187 LEWACSGIRINCVAPGVIYSQTA 209

>pdb|3OIC|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From B. Subtilis (Apo Form) Length = 258

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 90/194 (46%), Gaps = 9/194 (4%)
Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGVVCH 69
           Q K A+VT S++G+G   A RL   G ++V++ +R +K   E   +++  G++V+ V  +
Sbjct: 3   QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKAN 62
Query: 70  VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLL 129
           V    + K +  Q  E FG++               +++ +E+  D   +IN K+ +   
Sbjct: 63  VGQPAKIKEMFQQIDETFGRL-DVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCA 121
Query: 130 QDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNC 186
           Q+AA  ++K  G  +V ISS+   +   +    GV              E++P    VN 
Sbjct: 122 QEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELSPKQIIVNA 181
Query: 187 VAPGFVPT----HF 196
           V+ G + T    HF
Sbjct: 182 VSGGAIDTDALKHF 195

>pdb|3GVC|A Chain A, Crystal Structure Of Probable Short-Chain Dehydrogenase- Reductase From Mycobacterium Tuberculosis Length = 277

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 78/188 (41%), Gaps = 7/188 (3%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
             GKVAIVT +  GIG  +A RL  EG  V+ +       D A  K+   G         
Sbjct: 27  LAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI---GCGAAACRVD 83
Query: 70  VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLL 129
           VS+ QQ   +++  +  FG +               I  T E   D++  IN++ + L  
Sbjct: 84  VSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVED-FDRVIAINLRGAWLCT 142
Query: 130 QDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEM-APDTRVNC 186
           + AAP +  + G ++V +SS+AG         YG+              E+ +   R N 
Sbjct: 143 KHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELRSSGIRSNT 202
Query: 187 VAPGFVPT 194
           + P FV T
Sbjct: 203 LLPAFVDT 210

>pdb|4ESO|A Chain A, Crystal Structure Of A Putative Oxidoreductase Protein From Sinorhizobium Meliloti 1021 In Complex With Nadp Length = 255

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/199 (24%), Positives = 73/199 (36%), Gaps = 31/199 (15%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
           +QGK AIV   T G G     RL   GA V+++ R + N+        AR  E  G   H
Sbjct: 6   YQGKKAIVIGGTHGXGLATVRRLVEGGAEVLLTGRNESNI--------ARIREEFGPRVH 57
Query: 70  VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXIL-------------QTKESVLDK 116
                     +   I    +I               +L             Q  E+  D+
Sbjct: 58  A---------LRSDIADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDR 108
Query: 117 LWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXX 176
            + +N K +   +Q   P +++G S+V  SS+A        ++Y                
Sbjct: 109 QFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGHPGXSVYSASKAALVSFASVLAA 168
Query: 177 EMAP-DTRVNCVAPGFVPT 194
           E+ P   RVN V+PGF+ T
Sbjct: 169 ELLPRGIRVNSVSPGFIDT 187

>pdb|3VC7|A Chain A, Crystal Structure Of A Putative Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 254

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/199 (24%), Positives = 73/199 (36%), Gaps = 31/199 (15%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
           +QGK AIV   T G G     RL   GA V+++ R + N+        AR  E  G   H
Sbjct: 5   YQGKKAIVIGGTHGXGLATVRRLVEGGAEVLLTGRNESNI--------ARIREEFGPRVH 56
Query: 70  VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXIL-------------QTKESVLDK 116
                     +   I    +I               +L             Q  E+  D+
Sbjct: 57  A---------LRSDIADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDR 107
Query: 117 LWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXX 176
            + +N K +   +Q   P +++G S+V  SS+A        ++Y                
Sbjct: 108 QFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGHPGXSVYSASKAALVSFASVLAA 167
Query: 177 EMAP-DTRVNCVAPGFVPT 194
           E+ P   RVN V+PGF+ T
Sbjct: 168 ELLPRGIRVNSVSPGFIDT 186

>pdb|3AFM|A Chain A, Crystal Structure Of Aldose Reductase A1-R Responsible For Alginate Metabolism Length = 258

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/132 (25%), Positives = 61/132 (46%), Gaps = 1/132 (0%)
Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK-NVDEAVVKLKARGIEVI 64
           M    +GK  ++T S+QGIG   A      GA V +  RK   N+DE +  ++A G +  
Sbjct: 1   MFPDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAA 60
Query: 65  GVVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKS 124
                ++  +  + L+++ + KFG I               + +  ++  D + D N++S
Sbjct: 61  FFAADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRS 120
Query: 125 SILLLQDAAPHL 136
            ++  + A PHL
Sbjct: 121 VVMTTKFALPHL 132

>pdb|1YBV|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And An Active Site Inhibitor Length = 283

Iteration: 1
 Score = 54.3 bits (129), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 88/203 (43%), Gaps = 9/203 (4%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGVVC 68
            +GKVA+VT + +GIG  +A  LG  G  V+V+ +   ++ +E V  +K  G +   V  
Sbjct: 27  LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKA 86
Query: 69  HVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILL 128
           +V   +    +  + ++ FGK+                  T E   D+++ IN +    +
Sbjct: 87  NVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEE-FDRVFTINTRGQFFV 145
Query: 129 LQDAAPHLQKGSSVVLISSIAG-YQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNC 186
            ++A  HL+ G  ++L+ SI G  +     A+Y                +MA     VN 
Sbjct: 146 AREAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNV 205
Query: 187 VAPGFVPTHF-----AEYITSND 204
           VAPG + T        EYI + +
Sbjct: 206 VAPGGIKTDMYHAVCREYIPNGE 228

>pdb|1DOH|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And 4-nitro-inden-1-one Length = 283

Iteration: 1
 Score = 54.3 bits (129), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 88/203 (43%), Gaps = 9/203 (4%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGVVC 68
            +GKVA+VT + +GIG  +A  LG  G  V+V+ +   ++ +E V  +K  G +   V  
Sbjct: 27  LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKA 86
Query: 69  HVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILL 128
           +V   +    +  + ++ FGK+                  T E   D+++ IN +    +
Sbjct: 87  NVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEE-FDRVFTINTRGQFFV 145
Query: 129 LQDAAPHLQKGSSVVLISSIAG-YQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNC 186
            ++A  HL+ G  ++L+ SI G  +     A+Y                +MA     VN 
Sbjct: 146 AREAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNV 205
Query: 187 VAPGFVPTHF-----AEYITSND 204
           VAPG + T        EYI + +
Sbjct: 206 VAPGGIKTDMYHAVCREYIPNGE 228

>pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM SINORHIZOBIUM Meliloti 1021 Length = 271

Iteration: 1
 Score = 53.9 bits (128), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 44/188 (23%), Positives = 83/188 (44%), Gaps = 4/188 (2%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVV-KLKARGIEVIGVVC 68
             GK A VT  ++GIG  IA+RL LEGA+V ++        +AVV +++  G   + +  
Sbjct: 29  LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRA 88
Query: 69  HVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILL 128
              + +  +  I +T+E  G +               + +T  +  D++  +N ++  + 
Sbjct: 89  DNRDAEAIEQAIRETVEALGGL-DILVNSAGIWHSAPLEETTVADFDEVXAVNFRAPFVA 147
Query: 129 LQDAAPHLQKGSSVVLI-SSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNC 186
           ++ A+ HL  G  ++ I S++A   P   +++Y                ++ P    VN 
Sbjct: 148 IRSASRHLGDGGRIITIGSNLAELVPWPGISLYSASKAALAGLTKGLARDLGPRGITVNI 207
Query: 187 VAPGFVPT 194
           V PG   T
Sbjct: 208 VHPGSTDT 215

>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 80/192 (41%), Gaps = 8/192 (4%)
Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
           RF+ KV IVT S  GIG   AE L  EGA+VVV+    +  +    ++ A G   I V  
Sbjct: 6   RFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAV 65
Query: 69  HVSNGQQRKNLINQTIEKFGKIXXXXXXXX--XXXXXXXILQTKESVLDKLWDINVKSSI 126
            VS+ +  K + ++T+ +FG I                 +L        K   +N+  ++
Sbjct: 66  DVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGAL 125
Query: 127 LLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTR 183
              +     + K  G ++V  SS A +   +    YG+              E+   + R
Sbjct: 126 WCTRAVYKKMTKRGGGAIVNQSSTAAWLYSN---YYGLAKVGINGLTQQLSRELGGRNIR 182
Query: 184 VNCVAPGFVPTH 195
           +N +APG + T 
Sbjct: 183 INAIAPGPIDTE 194

>pdb|3I3O|A Chain A, 2.06 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad-acetone Length = 291

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/201 (19%), Positives = 88/201 (43%), Gaps = 7/201 (3%)
Query: 5   KMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK-NVDEAVVKLKARGIEV 63
           K +++ +GK  ++T    GIG  ++     EGA++ ++   ++ + +E    ++  G++ 
Sbjct: 40  KGSEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKC 99
Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVK 123
           + +   +S+ Q  K+++ +T+ + G +               +       L+K + IN+ 
Sbjct: 100 VLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIF 159
Query: 124 SSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPD-T 182
           S   + + A  HL++G  ++  +SI  Y+   ++  Y                 +     
Sbjct: 160 SYFHVTKAALSHLKQGDVIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQKGI 219
Query: 183 RVNCVAPG-----FVPTHFAE 198
           RVN VAPG      +P+ F E
Sbjct: 220 RVNGVAPGPIWTPLIPSSFDE 240

>pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/194 (21%), Positives = 82/194 (42%), Gaps = 4/194 (2%)
Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           KV ++T ++ GIG GIA  LG+ GA +++ +R+Q  ++    +++  G   +  V  V++
Sbjct: 5   KVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTD 64
Query: 73  GQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLLQDA 132
                      ++ +G+I               +   K    +++ D+N+K  +  +   
Sbjct: 65  RHSVAAFAQAAVDTWGRI-DVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAV 123
Query: 133 APHL--QKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPDTRVNCVAPG 190
            P +  Q+   ++ I SI       + A+Y                E + + RV CV PG
Sbjct: 124 LPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVRAISDGLRQE-STNIRVTCVNPG 182
Query: 191 FVPTHFAEYITSND 204
            V +  A  IT  +
Sbjct: 183 VVESELAGTITHEE 196

>pdb|3IJR|A Chain A, 2.05 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad+ Length = 291

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/202 (19%), Positives = 88/202 (43%), Gaps = 7/202 (3%)
Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK-NVDEAVVKLKARGIE 62
            K +++ +GK  ++T    GIG  ++     EGA++ ++   ++ + +E    ++  G++
Sbjct: 39  YKGSEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVK 98
Query: 63  VIGVVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINV 122
            + +   +S+ Q  K+++ +T+ + G +               +       L+K + IN+
Sbjct: 99  CVLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINI 158
Query: 123 KSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPD- 181
            S   + + A  HL++G  ++  +SI  Y+   ++  Y                 +    
Sbjct: 159 FSYFHVTKAALSHLKQGDVIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQKG 218
Query: 182 TRVNCVAPG-----FVPTHFAE 198
            RVN VAPG      +P+ F E
Sbjct: 219 IRVNGVAPGPIWTPLIPSSFDE 240

>pdb|3T4X|A Chain A, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE FROM Bacillus Anthracis Str. Ames Ancestor Length = 267

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 9/156 (5%)
Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVI--GV 66
           + +GK A+VT ST GIG  IA  L  EGA+V+++ R+++NV+E + +++A+  + I   V
Sbjct: 7   QLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPV 66
Query: 67  VCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSI 126
           V  +   Q  +++    IEK+ K+                    E    KL+++N+ S +
Sbjct: 67  VADLGTEQGCQDV----IEKYPKVDILINNLGIFEPVEYFDIPDEDWF-KLFEVNIXSGV 121
Query: 127 LLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMY 160
            L +        +K   V+ I+S A   P    A Y
Sbjct: 122 RLTRSYLKKXIERKEGRVIFIASEAAIXPSQEXAHY 157

>pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase Rickettsia Prowazekii Length = 249

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 87/195 (44%), Gaps = 17/195 (8%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVC 68
             GK +++T ++ GIG  IA  L   G+ V++S   ++ +      LK    IE    VC
Sbjct: 12  LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIE----VC 67
Query: 69  HVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILL 128
           +++N ++  NLI++T                       ++ K+   DK+ DIN+K++ +L
Sbjct: 68  NLANKEECSNLISKTSN-----LDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFIL 122
Query: 129 LQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPDTR--- 183
            ++A   +  ++   ++ ISSI G       A Y                E+A  TR   
Sbjct: 123 NREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVA--TRGIT 180
Query: 184 VNCVAPGFVPTHFAE 198
           VN VAPGF+ +   +
Sbjct: 181 VNAVAPGFIKSDMTD 195

>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 82/194 (42%), Gaps = 4/194 (2%)
Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHV 70
           + KVA+VT + +GIG  IA+ L    + V+  SR QK+ D  V ++K+ G E  G    V
Sbjct: 43  ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDV 102
Query: 71  SNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLLQ 130
           S  ++   +IN+ + +  K                 L+ K    + +   N+ S   + Q
Sbjct: 103 SKKEEISEVINKILTEH-KNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQ 161
Query: 131 DAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNCV 187
             +  +   +   ++ ISSI G       A Y                E+A  +  VN +
Sbjct: 162 PISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITVNAI 221
Query: 188 APGFVPTHFAEYIT 201
           APGF+ +   + I+
Sbjct: 222 APGFISSDMTDKIS 235

>pdb|3R3S|A Chain A, Structure Of The Ygha Oxidoreductase From Salmonella Enterica Length = 294

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 78/189 (41%), Gaps = 3/189 (1%)
Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK--LKARGIEVIGV 66
           R + + A+VT    GIG   A     EGA V ++    +  D   VK  ++  G + + +
Sbjct: 46  RLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLL 105
Query: 67  VCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSI 126
              +S+    ++L+++  E  G +               I         + + +NV +  
Sbjct: 106 PGDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALF 165
Query: 127 LLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPD-TRVN 185
            + Q+A P L KG+S++  SSI  YQP   +  Y                ++A    RVN
Sbjct: 166 WITQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVN 225
Query: 186 CVAPGFVPT 194
            VAPG + T
Sbjct: 226 IVAPGPIWT 234

>pdb|3AWD|A Chain A, Crystal Structure Of Gox2181 Length = 260

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 83/210 (39%), Gaps = 21/210 (10%)
Query: 1   MEKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG 60
           MEK+    R   +VAIVT   Q IG      L   GA V+++   +    +AV  L+  G
Sbjct: 6   MEKL----RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEG 61
Query: 61  IEVIGVVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTK-ESVLDKLW- 118
            +V  VV  V+N +  +N +    E+ G++               I + K E + D  W 
Sbjct: 62  HDVSSVVMDVTNTESVQNAVRSVHEQEGRV-----DILVACAGICISEVKAEDMTDGQWL 116
Query: 119 ---DINVKSSILLLQDAAPHL--QKGSSVVLISSIAGY---QPQSSMAMYGVXXXXXXXX 170
              DIN+       Q     +  QK   +V I S++G    +PQ   A Y          
Sbjct: 117 KQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQ-AAYNASKAGVHQY 175
Query: 171 XXXXXXEMAPD-TRVNCVAPGFVPTHFAEY 199
                 E AP   R N VAP ++ T    +
Sbjct: 176 IRSLAAEWAPHGIRANAVAPTYIETTLTRF 205

>pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l Complexed With Nad+ Length = 261

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 6/194 (3%)
Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSR-KQKNVDEAVVKLKARGIEVI 64
           M K  +GKV ++T S+ G+G  +A R   E A VVV+ R K+   +  + ++K  G E I
Sbjct: 1   MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAI 60
Query: 65  GVVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKS 124
            V   V+      NL+   I++FGK+                 +   S  +K+ D N+  
Sbjct: 61  AVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSS-HEMSLSDWNKVIDTNLTG 119
Query: 125 SILLLQDAAPHLQKGS---SVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPD 181
           + L  ++A  +  +     +V+ +SS+    P      Y                E AP 
Sbjct: 120 AFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPK 179
Query: 182 -TRVNCVAPGFVPT 194
             RVN + PG + T
Sbjct: 180 GIRVNNIGPGAINT 193

>pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With Nad+ Length = 261

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 6/194 (3%)
Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSR-KQKNVDEAVVKLKARGIEVI 64
           M K  +GKV ++T S+ G+G  +A R   E A VVV+ R K+   +  + ++K  G E I
Sbjct: 1   MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAI 60
Query: 65  GVVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKS 124
            V   V+      NL+   I++FGK+                 +   S  +K+ D N+  
Sbjct: 61  AVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSS-HEMSLSDWNKVIDTNLTG 119
Query: 125 SILLLQDAAPHLQKGS---SVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPD 181
           + L  ++A  +  +     +V+ +SS+    P      Y                E AP 
Sbjct: 120 AFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPK 179
Query: 182 -TRVNCVAPGFVPT 194
             RVN + PG + T
Sbjct: 180 GIRVNNIGPGAINT 193

>pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations (Q252l And E170k) Of Glucose Dehydrogenase From Bacillus Megaterium Iwg3 For The Stabilization Of Oligomeric State Length = 261

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 6/194 (3%)
Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSR-KQKNVDEAVVKLKARGIEVI 64
           M K  +GKV ++T S+ G+G  +A R   E A VVV+ R K+   +  + ++K  G E I
Sbjct: 1   MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAI 60
Query: 65  GVVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKS 124
            V   V+      NL+   I++FGK+                 +   S  +K+ D N+  
Sbjct: 61  AVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSS-HEMSLSDWNKVIDTNLTG 119
Query: 125 SILLLQDAAPHLQKGS---SVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPD 181
           + L  ++A  +  +     +V+ +SS+    P      Y                E AP 
Sbjct: 120 AFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTKTLALEYAPK 179
Query: 182 -TRVNCVAPGFVPT 194
             RVN + PG + T
Sbjct: 180 GIRVNNIGPGAINT 193

>pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a Complexed With Nad+ Length = 261

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 6/194 (3%)
Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSR-KQKNVDEAVVKLKARGIEVI 64
           M K  +GKV ++T S+ G+G  +A R   E A VVV+ R K+   +  + ++K  G E I
Sbjct: 1   MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAI 60
Query: 65  GVVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKS 124
            V   V+      NL+   I++FGK+                 +   S  +K+ D N+  
Sbjct: 61  AVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLANPVSS-HEMSLSDWNKVIDTNLTG 119
Query: 125 SILLLQDAAPHLQKGS---SVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPD 181
           + L  ++A  +  +     +V+ +SS+    P      Y                E AP 
Sbjct: 120 AFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPK 179
Query: 182 -TRVNCVAPGFVPT 194
             RVN + PG + T
Sbjct: 180 GIRVNNIGPGAINT 193

>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 79/189 (41%), Gaps = 5/189 (2%)
Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
           R  GK AI+T +  GIG  IA      GASVVVS       +  V +++  G +     C
Sbjct: 8   RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRC 67
Query: 69  HVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILL 128
            +++ Q+   L +  I K GK+                +   +    + +++NV S   L
Sbjct: 68  DITSEQELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMAD--FRRAYELNVFSFFHL 125
Query: 129 LQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTRVN 185
            Q  AP ++K  G  ++ I+S+A      +M  Y                ++   + RVN
Sbjct: 126 SQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVN 185
Query: 186 CVAPGFVPT 194
            +APG + T
Sbjct: 186 GIAPGAILT 194

>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase Type1, Complexed With Nad+ Length = 267

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 83/209 (39%), Gaps = 27/209 (12%)
Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIE--- 62
           MA    GKVA+VT + QGIG   AE L L+GA V +         EA V+ KA   E   
Sbjct: 1   MAHMVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNL----EAGVQCKAALHEQFE 56
Query: 63  ---VIGVVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWD 119
               + + C V++ QQ ++   + ++ FG++                    E   +K   
Sbjct: 57  PQKTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGV---------NNEKNWEKTLQ 107
Query: 120 INVKSSILLLQDAAPHLQK-----GSSVVLISSIAGYQPQSSMAMYGVXXX---XXXXXX 171
           IN+ S I        ++ K     G  ++ +SS+AG  P +   +Y              
Sbjct: 108 INLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSA 167
Query: 172 XXXXXEMAPDTRVNCVAPGFVPTHFAEYI 200
                 M    R+N + PGFV T   E I
Sbjct: 168 ALAANLMNSGVRLNAICPGFVNTAILESI 196

>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From Streptococcus Suis Type 2 Length = 291

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 44/81 (54%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
            +GK+A+VT ++ GIGF IA      GA++V +   Q+ VD  +   KA GI   G VC 
Sbjct: 32  LKGKIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGINAHGYVCD 91
Query: 70  VSNGQQRKNLINQTIEKFGKI 90
           V++    + ++ Q   + G I
Sbjct: 92  VTDEDGIQAMVAQIESEVGII 112

>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293

Iteration: 1
 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 75/185 (40%), Gaps = 6/185 (3%)
Query: 16  IVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI-EVIGVVCHVSNGQ 74
           +VT  T+GIG GIA      GA+V V++R  + +     +L   G   VIGV   VS+  
Sbjct: 45  LVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPG 104
Query: 75  QRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLLQDA-A 133
              +     ++ FG +                  T E  L ++ D+NVK ++  +Q   A
Sbjct: 105 SCADAARTVVDAFGALDVVCANAGIFPEARLDTMTPEQ-LSEVLDVNVKGTVYTVQACLA 163
Query: 134 PHLQKG-SSVVLISSIAG-YQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNCVAPG 190
           P    G   V+L SSI G        + YG               E+AP    VN + PG
Sbjct: 164 PLTASGRGRVILTSSITGPVTGYPGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPG 223
Query: 191 FVPTH 195
            + T 
Sbjct: 224 NILTE 228

>pdb|3TSC|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Map_2410 From Mycobacterium Paratuberculosis Bound To Nad Length = 277

Iteration: 1
 Score = 50.1 bits (118), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 47/206 (22%), Positives = 81/206 (39%), Gaps = 18/206 (8%)
Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVV-------------SSRKQKNVDEA 52
           MA + +G+VA +T + +G G   A R+  EGA ++                    ++ E 
Sbjct: 5   MAGKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSET 64
Query: 53  VVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKES 112
           V  ++A    ++  V    +  + + +++  +   G++                  T E 
Sbjct: 65  VRLVEAANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPED 124
Query: 113 VLDKLWDINVKSSILLLQDAAPHL---QKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXX 169
             D + DINV  +   +   AP +    +G S++LISS AG + Q  M  Y         
Sbjct: 125 FRDVM-DINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTASKHAVTG 183
Query: 170 XXXXXXXEMAPDT-RVNCVAPGFVPT 194
                  E+   + RVN V PG V T
Sbjct: 184 LARAFAAELGKHSIRVNSVHPGPVNT 209

>pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From Sinorhizobium Meliloti 1021 Length = 283

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 65/141 (46%), Gaps = 2/141 (1%)
Query: 14  VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNG 73
           VA++T +  GIG   A  L  +G +V    R +  V+E   ++   G + I +   VS+ 
Sbjct: 30  VALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDE 89
Query: 74  QQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLLQDAA 133
            Q +N +   + KFG +               I   K    D+   +N++ + L L    
Sbjct: 90  LQXRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTV 149
Query: 134 PHLQK--GSSVVLISSIAGYQ 152
           P+L++  G ++V++SSI G +
Sbjct: 150 PYLKQRGGGAIVVVSSINGTR 170

>pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis At 1.87 A Resolution Length = 255

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 82/192 (42%), Gaps = 7/192 (3%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEV--IGV 66
            +GKVA+VT +++GIG  IA+RL  +GA V +    +++  +E V ++++ G     IG 
Sbjct: 5   LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGA 64
Query: 67  VCHVSNGQQ--RKNLINQTIEKFGKIXXXXXXXXXXXXXXXIL-QTKESVLDKLWDINVK 123
                +G +    +L N+   + G                  + +T E   D+   +N K
Sbjct: 65  NLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRXVSVNAK 124
Query: 124 SSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEM-APDT 182
           +   ++Q A   L+  S ++ ISS A          Y                ++ A   
Sbjct: 125 APFFIIQQALSRLRDNSRIINISSAATRISLPDFIAYSXTKGAINTXTFTLAKQLGARGI 184
Query: 183 RVNCVAPGFVPT 194
            VN + PGFV T
Sbjct: 185 TVNAILPGFVKT 196

>pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 271

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 78/194 (40%), Gaps = 7/194 (3%)
Query: 5   KMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVI 64
            M    + KVAI+T +  GIG   +  L   GA VV++   + ++  A   +  RG   +
Sbjct: 4   SMTAELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV-GRG--AV 60
Query: 65  GVVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXIL-QTKESVLDKLWDINVK 123
             V  ++N    + LI+ TI+ FG++               ++ Q    V D  + +N +
Sbjct: 61  HHVVDLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNAR 120
Query: 124 SSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPD 181
            ++L+ + A P L    G ++V ISS   +        Y                +    
Sbjct: 121 GTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYGRH 180
Query: 182 -TRVNCVAPGFVPT 194
             R N +APG V T
Sbjct: 181 GVRCNAIAPGLVRT 194

>pdb|3CTM|A Chain A, Crystal Structure Of A Carbonyl Reductase From Candida Parapsilosis With Anti-Prelog Stereo-Specificity Length = 279

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/200 (22%), Positives = 80/200 (40%), Gaps = 7/200 (3%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
            +GKVA VT S+ GIG+ +AE     GA V +        ++A    K  G+      C+
Sbjct: 32  LKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCN 91
Query: 70  VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKE-SVLDKLWDINVKSSILL 128
           +S+ +  +  I+Q  + FG I                +        +K+  +++      
Sbjct: 92  ISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYC 151
Query: 129 LQDAAPHLQKG--SSVVLISSIAG---YQPQSSMAMYGVXXXXXXXXXXXXXXEMAPDTR 183
             +     +K    S+++ SSI+G     PQ   A Y                E AP  R
Sbjct: 152 SHNIGKIFKKNGKGSLIITSSISGKIVNIPQ-LQAPYNTAKAACTHLAKSLAIEWAPFAR 210
Query: 184 VNCVAPGFVPTHFAEYITSN 203
           VN ++PG++ T   ++ + +
Sbjct: 211 VNTISPGYIDTDITDFASKD 230

>pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus Brevis In Complex With Phenylethanol And Nadh Length = 251

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 77/194 (39%), Gaps = 8/194 (4%)
Query: 7   AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGV 66
           + R  GKVAI+T  T GIG  IA +   EGA V+++ R   +V E   K      ++   
Sbjct: 1   SNRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITDR-HSDVGEKAAKSVGTPDQIQFF 59
Query: 67  VCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSI 126
               S+      L + T + FG +               + +T  +   KL  +N+    
Sbjct: 60  QHDSSDEDGWTKLFDATEKAFGPV-STLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVF 118
Query: 127 LLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMA---P 180
              +     ++    G+S++ +SSI G+    S+  Y                + A    
Sbjct: 119 FGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDY 178
Query: 181 DTRVNCVAPGFVPT 194
           D RVN V PG++ T
Sbjct: 179 DVRVNTVHPGYIKT 192

>pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh) (Apoenyzme) From Lactobacillus Brevis Length = 251

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 77/194 (39%), Gaps = 8/194 (4%)
Query: 7   AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGV 66
           + R  GKVAI+T  T GIG  IA +   EGA V+++ R   +V E   K      ++   
Sbjct: 1   SNRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGR-HSDVGEKAAKSVGTPDQIQFF 59
Query: 67  VCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSI 126
               S+      L + T + FG +               + +T  +   KL  +N+    
Sbjct: 60  QHDSSDEDGWTKLFDATEKAFGPV-STLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVF 118
Query: 127 LLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMA---P 180
              +     ++    G+S++ +SSI G+    S+  Y                + A    
Sbjct: 119 FGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDY 178
Query: 181 DTRVNCVAPGFVPT 194
           D RVN V PG++ T
Sbjct: 179 DVRVNTVHPGYIKT 192

>pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 276

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/196 (22%), Positives = 81/196 (41%), Gaps = 9/196 (4%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
             GK A++T ++ GIG  +A      GA V V++R    +     ++   G + + + C 
Sbjct: 30  LSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCD 89
Query: 70  VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLL 129
           V+   Q + +++Q   + G I               +    E    ++ D NV    L  
Sbjct: 90  VTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEE-FQRIQDTNVTGVFLTA 148
Query: 130 QDAAPHLQK---GSSVVLISSIAGY---QPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DT 182
           Q AA  +     G +++  +S++G+    PQ  ++ Y                E+AP   
Sbjct: 149 QAAARAMVDQGLGGTIITTASMSGHIINIPQ-QVSHYCTSKAAVVHLTKAMAVELAPHQI 207
Query: 183 RVNCVAPGFVPTHFAE 198
           RVN V+PG++ T   E
Sbjct: 208 RVNSVSPGYIRTELVE 223

>pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reduc Brucella Melitensis Length = 261

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/177 (21%), Positives = 69/177 (38%), Gaps = 9/177 (5%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
            +GKVA++T +  G G G+A+R    GA VV+  R +   +    ++   G   + V   
Sbjct: 7   LEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI---GDAALAVAAD 63
Query: 70  VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLL 129
           +S        +   + KFGK+                   +    D++  +NV+   L+ 
Sbjct: 64  ISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMT 123
Query: 130 QDAAPHLQ----KGSSVVL--ISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP 180
               PH +    KG   V+  ++S    +P+ ++A Y                E+AP
Sbjct: 124 SKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAIELAP 180

>pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph Length = 279

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 79/197 (40%), Gaps = 14/197 (7%)
Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           + A VT  + GIG  +A  L   G +V   +R  KNV  AV  L+A G +V G  C V++
Sbjct: 25  QTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTS 84
Query: 73  GQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLW----DINVKSSILL 128
             +    +   +E+FG I                 +T + + D LW    D N+     +
Sbjct: 85  TDEVHAAVAAAVERFGPIGILVNSAGRNGGG----ETAD-LDDALWADVLDTNLTGVFRV 139
Query: 129 LQD---AAPHLQKG-SSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMA-PDTR 183
            ++   A    + G   +V I+S  G Q     A Y                E+A     
Sbjct: 140 TREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGVVGFTKSVGFELAKTGIT 199
Query: 184 VNCVAPGFVPTHFAEYI 200
           VN V PG+V T  AE +
Sbjct: 200 VNAVCPGYVETPMAERV 216

>pdb|3AK4|A Chain A, Crystal Structure Of Nadh-Dependent Quinuclidinone Reductase From Agrobacterium Tumefaciens Length = 263

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 72/193 (37%), Gaps = 8/193 (4%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
             G+ AIVT  ++GIG  IA  L   GA+V ++          V  L+  G     V   
Sbjct: 10  LSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGG---FAVEVD 66
Query: 70  VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLL 129
           V+        + + I+  G                 +  T E   D  +D+N +   L  
Sbjct: 67  VTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEE-WDFNFDVNARGVFLAN 125
Query: 130 QDAAPHLQKGSS---VVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTRVN 185
           Q A  H    ++   +V  +S+A       +A Y                EMAP + RVN
Sbjct: 126 QIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAPKNIRVN 185
Query: 186 CVAPGFVPTHFAE 198
           CV PGFV T   E
Sbjct: 186 CVCPGFVKTAMQE 198

>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/198 (22%), Positives = 87/198 (43%), Gaps = 9/198 (4%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
           F+GK+A+VT +++GIG  IAE L   GA V+ ++  +         L A G    G++ +
Sbjct: 3   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANG---KGLMLN 59
Query: 70  VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLL 129
           V++    ++++ +   +FG++               +++ K+   + + + N+ SS+  L
Sbjct: 60  VTDPASIESVLEKIRAEFGEV-DILVNNAGITRDNLLMRMKDEEWNDIIETNL-SSVFRL 117
Query: 130 QDA---APHLQKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTRVN 185
             A   A   ++   ++ I S+ G       A Y                E+A     VN
Sbjct: 118 SKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVN 177
Query: 186 CVAPGFVPTHFAEYITSN 203
            VAPGF+ T     ++ +
Sbjct: 178 VVAPGFIETDMTRALSDD 195

>pdb|3T7C|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nad Length = 299

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/205 (20%), Positives = 82/205 (40%), Gaps = 16/205 (7%)
Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVV------------VSSRKQKNVDEAV 53
           MA + +GKVA +T + +G G   A  L  EGA ++            +      ++ E V
Sbjct: 22  MAGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETV 81
Query: 54  VKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESV 113
            +++A G  +I     V +    +  ++  + + G++               + +     
Sbjct: 82  RQVEALGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKT 141
Query: 114 LDKLWDINVKSSILLLQDAAPHL---QKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXX 170
              + D+N+  + +  + A PH+   ++G S+V  SSI G +   ++  Y          
Sbjct: 142 WRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGLHGL 201
Query: 171 XXXXXXEMAP-DTRVNCVAPGFVPT 194
                 E+ P + RVN V P  V T
Sbjct: 202 MRTMALELGPRNIRVNIVCPSSVAT 226

>pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase (Saro_0793) From Novosphingobium Aromaticivorans Length = 319

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/163 (24%), Positives = 72/163 (44%), Gaps = 11/163 (6%)
Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEVIG 65
           K F G+ A VT    G+G G+  +L  +G  V ++  +Q ++D+A+  L+A   G EV+G
Sbjct: 4   KDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMG 63
Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSS 125
           V   V++ +  K   ++   +FG +               I ++     D L  +N+   
Sbjct: 64  VQLDVASREGFKMAADEVEARFGPV-SILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGV 122
Query: 126 ILLLQDAAPHL--------QKGSSVVLISSIAGYQPQSSMAMY 160
           +  +    P +        QKG  VV  +S+A +    S  +Y
Sbjct: 123 VNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIY 165

>pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From Sulfolobus Acidocaldarius Length = 254

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/155 (24%), Positives = 74/155 (47%), Gaps = 2/155 (1%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
            + KV IVT +  GIG  IA++  L  + VV     +  +++ V +L+  G EV+GV   
Sbjct: 5   LKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKAD 64
Query: 70  VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLL 129
           VS  +  +  + +T E + +I               + +  + + +++  +N+ S+    
Sbjct: 65  VSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSS 124
Query: 130 QDAAP-HLQKGSSVVL-ISSIAGYQPQSSMAMYGV 162
           +   P  L++G  V++  +SIAG +   + A Y V
Sbjct: 125 RAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTV 159

>pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol Dehydrogenase Length = 256

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/186 (25%), Positives = 74/186 (39%), Gaps = 5/186 (2%)
Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           KVA+VT + QGIG  IA RL  +G +V ++            ++   G   + V   VS+
Sbjct: 3   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD 62
Query: 73  GQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLLQDA 132
             Q    + Q  +  G                    T E ++DK+++INVK  I  +Q A
Sbjct: 63  RDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPE-IVDKVYNINVKGVIWGIQAA 121
Query: 133 APHLQK---GSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNCVA 188
               +K   G  ++   S AG+     +A+Y                ++AP    VN   
Sbjct: 122 VEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYC 181
Query: 189 PGFVPT 194
           PG V T
Sbjct: 182 PGIVKT 187

>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 57/133 (42%), Gaps = 3/133 (2%)
Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
           M +R + K+A++T    GIG  IAER  +EGA + ++        EA ++   R   V+ 
Sbjct: 1   MTQRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGR--RVLT 58
Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSS 125
           V C VS     +    Q I  FG+                   T E    K ++INV S 
Sbjct: 59  VKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQ-WKKTFEINVDSG 117
Query: 126 ILLLQDAAPHLQK 138
            L+ +   P +++
Sbjct: 118 FLMAKAFVPGMKR 130

>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/203 (22%), Positives = 83/203 (40%), Gaps = 16/203 (7%)
Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
           R  GK A++T S +GIG   AE    EGA V ++     N++ A       G     +  
Sbjct: 2   RLDGKTALITGSARGIGRAFAEAYVREGARVAIA---DINLEAARATAAEIGPAACAIAL 58
Query: 69  HVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILL 128
            V++       + + ++++G I               +  T+ES  D+L+ INV  ++ +
Sbjct: 59  DVTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRES-YDRLFAINVSGTLFM 117
Query: 129 LQDAAPHL---QKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEM-APDTRV 184
           +Q  A  +    +G  ++ ++S AG + ++ + +Y                 +      V
Sbjct: 118 MQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINV 177
Query: 185 NCVAPGF--------VPTHFAEY 199
           N +APG         V   FA+Y
Sbjct: 178 NAIAPGVVDGEHWDGVDAKFADY 200

>pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase Length = 267

Iteration: 1
 Score = 47.0 bits (110), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 78/195 (40%), Gaps = 5/195 (2%)
Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKARGIEVIGV 66
           RF  +V ++T    G+G   A RL  EGA  S+V  S +     +A V   A   EV+  
Sbjct: 10  RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTT 69
Query: 67  VCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSI 126
           V  VS+  Q +  +  T E+FG+I                     +  DK+  IN++   
Sbjct: 70  VADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVF 129
Query: 127 LLLQDAAPHLQKGSS--VVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTR 183
           L L+     +++  S  VV  +S+ G +   + + Y                E      R
Sbjct: 130 LGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIR 189
Query: 184 VNCVAPGFVPTHFAE 198
           +N +APG + T   E
Sbjct: 190 INAIAPGAIWTPMVE 204

>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/198 (22%), Positives = 87/198 (43%), Gaps = 9/198 (4%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
           F+GK+A+VT +++GIG  IAE L   GA V+ ++  +         L A G    G++ +
Sbjct: 3   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANG---KGLMLN 59
Query: 70  VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLL 129
           V++    ++++ +   +FG++               +++ K+   + + + N+ SS+  L
Sbjct: 60  VTDPASIESVLEKIRAEFGEV-DILVNNAGITRDNLLMRMKDEEWNDIIETNL-SSVFRL 117
Query: 130 QDA---APHLQKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTRVN 185
             A   A   ++   ++ I S+ G       A +                E+A     VN
Sbjct: 118 SKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANFAAAKAGLIGFSKSLAREVASRGITVN 177
Query: 186 CVAPGFVPTHFAEYITSN 203
            VAPGF+ T     ++ +
Sbjct: 178 VVAPGFIETDMTRALSDD 195

>pdb|2A4K|A Chain A, 3-Oxoacyl-[acyl Carrier Protein] Reductase From Thermus Thermophilus Tt0137 Length = 263

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 85/190 (44%), Gaps = 12/190 (6%)
Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
           R  GK  +VT +  GIG    +    EGAS+V   R+++ + EAV  L+A   E I VV 
Sbjct: 3   RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEA---EAIAVVA 59
Query: 69  HVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXI---LQTKESVLDKLWDINVKSS 125
            VS+ +  + +  + +E+FG++                   L+  E VL     +N+  S
Sbjct: 60  DVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVL----RVNLTGS 115
Query: 126 ILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMA-PDTRV 184
            L+ + A   L++G S+VL  S+AG      +A Y                E+A    RV
Sbjct: 116 FLVARKAGEVLEEGGSLVLTGSVAGLG-AFGLAHYAAGKLGVVGLARTLALELARKGVRV 174
Query: 185 NCVAPGFVPT 194
           N + PG + T
Sbjct: 175 NVLLPGLIQT 184

>pdb|3VTZ|A Chain A, Structure Of Thermoplasma Volcanium Aldohexose Dehydrogenase Length = 269

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 76/189 (40%), Gaps = 13/189 (6%)
Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
           + F  KVAIVT  + GIG  + + L   GA VV  S  +K+        K          
Sbjct: 10  EEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHFK---------- 59
Query: 68  CHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSIL 127
             V+N ++ K  + +T +K+G+I                L   E +  ++ D+NV  S L
Sbjct: 60  IDVTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTE-IWRRIIDVNVNGSYL 118
Query: 128 LLQDAAP-HLQKG-SSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPDTRVN 185
           + +   P  L  G  S++ I+S+  Y    + A Y                + AP  R N
Sbjct: 119 MAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYAPKIRCN 178
Query: 186 CVAPGFVPT 194
            V PG + T
Sbjct: 179 AVCPGTIMT 187

>pdb|1Y5M|A Chain A, The Crystal Structure Of Murine 11b-Hydroxysteroid Dehydrogenase: An Important Therapeutic Target For Diabetes Length = 276

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 17/160 (10%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
            QGK  IVT +++GIG  +A  L   GA VV+++R +    E + K+ +R +E+     H
Sbjct: 16  LQGKKVIVTGASKGIGREMAYHLSKMGAHVVLTARSE----EGLQKVVSRCLELGAASAH 71
Query: 70  -VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLD-------KLWDIN 121
            ++   +      Q I K GK+               I QT  S+         ++ ++N
Sbjct: 72  YIAGTMEDMTFAEQFIVKAGKL----MGGLDMLILNHITQTSLSLFHDDIHSVRRVMEVN 127
Query: 122 VKSSILLLQDAAPHL-QKGSSVVLISSIAGYQPQSSMAMY 160
             S +++   A P L Q   S+ +ISS+AG   Q  +A Y
Sbjct: 128 FLSYVVMSTAALPMLKQSNGSIAVISSLAGKMTQPMIAPY 167

>pdb|2PD6|A Chain A, Structure Of Human Hydroxysteroid Dehydrogenase Type 8, Hsd17b8 Length = 264

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/206 (23%), Positives = 74/206 (35%), Gaps = 11/206 (5%)
Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV-- 63
           M  R +  +A+VT +  GIG  ++ RL  EGA+V      +    E V  L   G +   
Sbjct: 1   MQNRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGP 60
Query: 64  -----IGVVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLW 118
                      VS  +  + L+ Q    F +                +L   E   DK+ 
Sbjct: 61  PRGNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVI 120
Query: 119 DINVKSSILLLQDAAPHLQKG---SSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXX 175
            +N+K + L+ Q AA  L       S++ ISSI G         Y               
Sbjct: 121 AVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAA 180
Query: 176 XEMAPD-TRVNCVAPGFVPTHFAEYI 200
            E+     R N V PGF+ T   + +
Sbjct: 181 RELGRHGIRCNSVLPGFIATPMTQKV 206

>pdb|3UWR|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Strain 104 Length = 286

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/215 (20%), Positives = 84/215 (39%), Gaps = 20/215 (9%)
Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVV------------SSRKQKNVDEAV 53
           M  R  GKVA ++ + +G G   A RL  EGA ++                  +++ E  
Sbjct: 9   MTGRVAGKVAFISGAARGQGRSHAVRLAQEGADIIAIDICGPIENLAYPHSTPEDLAETA 68
Query: 54  VKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESV 113
             +K     ++     V + +  K+ ++  +E+ G++               + + +++V
Sbjct: 69  DLVKDLDRRIVTAQVDVRDFEALKSAVDSGVEQLGRLDIIVANAGVGTDGRKLHKIRDNV 128
Query: 114 LDKLWDINVKSSILLLQDAAPHL---QKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXX 170
              + DIN+      ++   PH+    +G S+VL SS+ G +   +   Y          
Sbjct: 129 WQDMIDINLTGVWHTVKAGVPHVLSGGRGGSIVLTSSVGGRKAYPNTGHYIAAKHGVIGL 188
Query: 171 XXXXXXEMAPDT-RVNCVAPGFVPTHFAEYITSND 204
                 E+ P   RVN V    +PT  +  +  ND
Sbjct: 189 MRAFAVELGPHMIRVNAV----LPTQVSTTMVMND 219

>pdb|3UVE|A Chain A, Crystal Structure Of Carveol Dehydrogenase ((+)-Trans-Carveol Dehydrogenase) From Mycobacterium Avium Length = 286

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/220 (20%), Positives = 82/220 (37%), Gaps = 24/220 (10%)
Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVV----------------VSSRKQKNV 49
           M  R +GKVA VT + +G G   A RL  EGA ++                + +   +++
Sbjct: 5   MTGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDL 64
Query: 50  DEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQT 109
            E    +K     ++     V +    K  ++  +E+ G++               + +T
Sbjct: 65  AETADLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKT 124
Query: 110 KESVLDKLWDINVKSSILLLQDAAPHL---QKGSSVVLISSIAGYQPQSSMAMYGVXXXX 166
            E    ++ DIN+      ++   PH+    +G S++L SS+ G +       Y      
Sbjct: 125 SEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKHG 184
Query: 167 XXXXXXXXXXEMAPDT-RVNCVAPGFVPTHFAEYITSNDG 205
                     E+     RVN V     PTH    +  N+G
Sbjct: 185 VVGLMRAFGVELGQHMIRVNSVH----PTHVKTPMLHNEG 220

>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate Dehydrogenase Length = 260

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/198 (23%), Positives = 82/198 (41%), Gaps = 14/198 (7%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSS-RKQKNVDEAVVKLKAR-GIEVIGVV 67
            +GKVA+VT ST GIG GIA  L  +GA +V++       +++    L A+ G++V+   
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61
Query: 68  CHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWD----INVK 123
             +S G+  + L++  + + G+I                    E    + WD    +N+ 
Sbjct: 62  ADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALI-----EDFPTEKWDAILALNLS 116
Query: 124 SSILLLQDAAPHLQKG--SSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPD 181
           +       A PH++K     ++ I+S  G    ++ + Y                E A  
Sbjct: 117 AVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQ 176
Query: 182 -TRVNCVAPGFVPTHFAE 198
               N + PG+V T   E
Sbjct: 177 GITANAICPGWVRTPLVE 194

>pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase Complexed With Nad+ Length = 260

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Query: 10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSS-RKQKNVDEAVVKLKAR-GIEVIGVV 67
           +GKVA+VT ST GIG GIA  L  +GA +V++       +++    L A+ G++V+   
Sbjct: 2  LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61
Query: 68 CHVSNGQQRKNLINQTIEKFGKI 90
            +S G+  + L++  + + G+I
Sbjct: 62 ADLSKGEAVRGLVDNAVRQMGRI 84

>pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase Length = 260

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Query: 10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSS-RKQKNVDEAVVKLKAR-GIEVIGVV 67
           +GKVA+VT ST GIG GIA  L  +GA +V++       +++    L A+ G++V+   
Sbjct: 2  LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61
Query: 68 CHVSNGQQRKNLINQTIEKFGKI 90
            +S G+  + L++  + + G+I
Sbjct: 62 ADLSKGEAVRGLVDNAVRQMGRI 84

>pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein) Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a Resolution Length = 269

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/190 (23%), Positives = 74/190 (38%), Gaps = 4/190 (2%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
            QGKVA+VT +++GIG  IA  LG  GA V+ ++      ++    LKA G+E  G+V  
Sbjct: 25  LQGKVALVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAETLKANGVEGAGLVLD 84
Query: 70  VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLL 129
           VS+ +     +    +  G+                +    +   D + + N+ S   L 
Sbjct: 85  VSSDESVAATLEHIQQHLGQPLIVVNNAGITRDNLLVRMKDDEWFDVV-NTNLNSLYRLS 143
Query: 130 QDAAPHLQKG--SSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPDT-RVNC 186
           +     + K     ++ I S+ G    +    Y                E+      VN 
Sbjct: 144 KAVLRGMTKARWGRIINIGSVVGAMGNAGQTNYAAAKAGLEGFTRALAREVGSRAITVNA 203
Query: 187 VAPGFVPTHF 196
           VAPGF+ T  
Sbjct: 204 VAPGFIDTDM 213

>pdb|3TOX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase In Complex With Nad(P) From Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/196 (24%), Positives = 76/196 (38%), Gaps = 6/196 (3%)
Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
            R +GK+AIVT ++ GIG   A     EGA VVV++R    + E   ++   G E   + 
Sbjct: 4   SRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALA 63
Query: 68  CHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSIL 127
             V +    + L+   + +FG +               I         +  D N+ S+ L
Sbjct: 64  GDVGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFL 123
Query: 128 LLQDAAPHLQK--GSSVVLISSIAGYQPQ-SSMAMYGVXXXXXXXXXXXXXXEM-APDTR 183
             +   P +    G S+   SS  G+    + +A Y                E+ A   R
Sbjct: 124 AAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGARGIR 183
Query: 184 VNCVAPGF--VPTHFA 197
           VN + PG    P +FA
Sbjct: 184 VNALLPGGTDTPANFA 199

>pdb|3KZV|A Chain A, The Crystal Structure Of A Cytoplasmic Protein With Unknown Function From Saccharomyces Cerevisiae Length = 254

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 80/197 (40%), Gaps = 7/197 (3%)
Query: 12  GKVAIVTASTQGIGFGIAERL-GLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCH 69
           GKV +VT  ++GIG  I + L  L+  +VV    +    +  + KLK + G     VV  
Sbjct: 2   GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARS---EAPLKKLKEKYGDRFFYVVGD 58
Query: 70  VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLL 129
           ++     K L+N  ++  GKI               + +   +   KL+DIN  S + L+
Sbjct: 59  ITEDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLV 118
Query: 130 QDAAPHLQK-GSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPDTRVNCVA 188
             A P L+K   +VV +SS A     SS   YG               E     +   VA
Sbjct: 119 GIALPELKKTNGNVVFVSSDACNMYFSSWGAYGSSKAALNHFAMTLANE-ERQVKAIAVA 177
Query: 189 PGFVPTHFAEYITSNDG 205
           PG V T     I  N G
Sbjct: 178 PGIVDTDMQVNIRENVG 194

>pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 76/187 (40%), Gaps = 7/187 (3%)
Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           +V IVT    GIG   AE     GA VVV+     N D AV      G +  GV   VS+
Sbjct: 28  RVCIVTGGGSGIGRATAELFAKNGAYVVVA---DVNEDAAVRVANEIGSKAFGVRVDVSS 84
Query: 73  GQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLLQDA 132
            +  ++ + +T  K+G++               ++   E   D++  +NVK   L  +  
Sbjct: 85  AKDAESXVEKTTAKWGRV-DVLVNNAGFGTTGNVVTIPEETWDRIXSVNVKGIFLCSKYV 143
Query: 133 APHLQK--GSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPD-TRVNCVAP 189
            P  ++  G S++  +S       +    Y                + A +  RVN VAP
Sbjct: 144 IPVXRRNGGGSIINTTSYTATSAIADRTAYVASKGAISSLTRAXAXDHAKEGIRVNAVAP 203
Query: 190 GFVPTHF 196
           G + + +
Sbjct: 204 GTIDSPY 210

>pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein Reductase From Brassica Napus Complexed With Nadp+ Length = 244

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 46/187 (24%), Positives = 79/187 (42%), Gaps = 5/187 (2%)
Query: 14  VAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           V +VT +++GIG  IA  LG  G  V+V+ +R  K  +E   +++A G + I     VS 
Sbjct: 3   VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSK 62
Query: 73  GQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLLQDA 132
               + ++   I+ +G I               +++ K+S  D++ D+N+    L  Q A
Sbjct: 63  EADVEAMMKTAIDAWGTI-DVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAA 121
Query: 133 APHLQK--GSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNCVAP 189
              + K     ++ I+S+ G       A Y                E A  +  VN V P
Sbjct: 122 TKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCP 181
Query: 190 GFVPTHF 196
           GF+ +  
Sbjct: 182 GFIASDM 188

>pdb|3KVO|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Hydroxysteroid Dehydrogenase Like 2 (Hsdl2) Length = 346

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/137 (22%), Positives = 63/137 (45%), Gaps = 8/137 (5%)
Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK-------NVDEAVVKLKARGI 61
           R  G    +T +++GIG  IA +   +GA++V++++  +        +  A  +++A G 
Sbjct: 42  RLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGG 101
Query: 62  EVIGVVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDIN 121
           + +  +  V + QQ    + + I+KFG I                L T    LD + ++N
Sbjct: 102 KALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNT-LDTPTKRLDLMMNVN 160
Query: 122 VKSSILLLQDAAPHLQK 138
            + + L  +   P+L+K
Sbjct: 161 TRGTYLASKACIPYLKK 177

>pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog (Target Efi- 506402 From Salmonella Enterica, Unliganded Structure Length = 255

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 78/196 (39%), Gaps = 19/196 (9%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
             GK A+VT S +G+GF  AE L   GA V+++  +   + E+V  L  +G +  GV   
Sbjct: 7   LTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFD 66
Query: 70  VSNGQQRKNLINQTIE-KFGKIXXXXXXXXXXXXXXXILQTKESV------LDKLWDINV 122
           V++           IE  F K+               I   K  V        K+ D N+
Sbjct: 67  VTD--------ELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNL 118
Query: 123 KSSILLLQDAAPHL---QKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMA 179
            S+ L+ + AA  +     G  ++ I S+     + ++A Y                E A
Sbjct: 119 TSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWA 178
Query: 180 P-DTRVNCVAPGFVPT 194
             + + N + PG++ T
Sbjct: 179 QFNIQTNAIGPGYILT 194

>pdb|4IMR|A Chain A, Crystal Structure Of 3-oxoacyl (acyl-carrier-protein) Reductase (target Efi-506442) From Agrobacterium Tumefaciens C58 With Nadp Bound Length = 275

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 82/199 (41%), Gaps = 7/199 (3%)
Query: 1   MEKMKMAKRF--QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA 58
            + M++   F  +G+ A+VT S++GIG  IAE L   GA V++   K  +      ++ A
Sbjct: 20  FQSMRLETIFGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIA 79
Query: 59  RGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLW 118
            G     +   +S      +LI +  E    +                  T   +  +L 
Sbjct: 80  SGGTAQELAGDLSEAGAGTDLIERA-EAIAPVDILVINASAQINATLSALTPNDLAFQL- 137
Query: 119 DINVKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXX 176
            +N+ S++ +LQ A P +  +K   VV I SI   +P+S +  Y                
Sbjct: 138 AVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKSVVTAYAATKAAQHNLIQSQAR 197
Query: 177 EMAPDT-RVNCVAPGFVPT 194
           + A D   +N +APG V T
Sbjct: 198 DFAGDNVLLNTLAPGLVDT 216

>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Thermoresistibile Length = 317

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/210 (23%), Positives = 85/210 (40%), Gaps = 25/210 (11%)
Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSS--RKQKNVD----------EAVVK 55
            R QGKVA +T + +G G   A RL  +GA +V     R+Q N+D          E V  
Sbjct: 42  NRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRL 101
Query: 56  LKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLD 115
           ++ +G  +I     V +    + ++++ + +FG I               +     S+ D
Sbjct: 102 VEEQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVV-----SLTD 156
Query: 116 KLWDINVKSSILLLQDAA----PHL---QKGSSVVLISSIAGYQPQSSMAMYGVXXXXXX 168
           + W   ++++++    A     P +    +G SV+ +SS  G +     + Y        
Sbjct: 157 QQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKHGVQ 216
Query: 169 XXXXXXXXEMA-PDTRVNCVAPGFVPTHFA 197
                   E+   + RVN V PG V T  A
Sbjct: 217 GLMLSLANEVGRHNIRVNSVNPGAVNTEMA 246

>pdb|3A28|C Chain C, Crystal Structure Of L-2,3-Butanediol Dehydrogenase Length = 258

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/197 (24%), Positives = 82/197 (41%), Gaps = 9/197 (4%)
Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSS--RKQKNVDEAVVKLKARGIEVIGVVCHV 70
           KVA+VT   QGIG GI+E+L  +G  + V+   ++++   E +  ++A   + + V   V
Sbjct: 3   KVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDV 62
Query: 71  SNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLLQ 130
           ++     + I++  EK G                 +L+  E  L +++ +NV S    +Q
Sbjct: 63  TDKANFDSAIDEAAEKLGGF-DVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQ 121
Query: 131 DAAPHLQ----KGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPDTR-VN 185
            A+        KG  +   S  A  Q    ++ Y                E+AP    VN
Sbjct: 122 AASRKFDELGVKGKIINAASIAA-IQGFPILSAYSTTKFAVRGLTQAAAQELAPKGHTVN 180
Query: 186 CVAPGFVPTHFAEYITS 202
             APG V T   E I +
Sbjct: 181 AYAPGIVGTGMWEQIDA 197

>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/199 (23%), Positives = 83/199 (41%), Gaps = 11/199 (5%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
            +GKVA+VT +++GIG  IAE L   GA V+ ++  +         L   G    G+  +
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNG---KGMALN 66
Query: 70  VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLL 129
           V+N +  + ++    ++FG +               +++ KE     + + N+ +SI  L
Sbjct: 67  VTNPESIEAVLKAITDEFGGV-DILVNNAAITRDNLLMRMKEEEWSDIMETNL-TSIFRL 124
Query: 130 QDAAPH---LQKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTRVN 185
             A       ++   ++ + S+ G    +  A Y                E+A     VN
Sbjct: 125 SKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVN 184
Query: 186 CVAPGFVPTHFAEYITSND 204
            VAPGF+ T   + +  ND
Sbjct: 185 TVAPGFIETDMTKAL--ND 201

>pdb|3GDF|A Chain A, Crystal Structure Of The Nadp-Dependent Mannitol Dehydrogenase From Cladosporium Herbarum. Length = 267

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/202 (21%), Positives = 88/202 (43%), Gaps = 15/202 (7%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLE--GASVVVS-SRKQKNVDEAVVKL-KARGIEVIG 65
            +GKV +VT ++   G GI    G    GA+V ++ + + +  +E V +L K  GI+   
Sbjct: 18  LKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKA 77
Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSS 125
             C V + +  + L+   +  FG+I               IL       + +  +++  +
Sbjct: 78  YKCQVDSYESCEKLVKDVVADFGQI-DAFIANAGATADSGILDGSVEAWNHVVQVDLNGT 136
Query: 126 ILLLQDAAPHL-QKGS-SVVLISSIAGY-----QPQSSMAMYGVXXXXXXXXXXXXXXEM 178
               +    H  ++G+ S+V+ +S++G+     Q Q+S   Y V              E 
Sbjct: 137 FHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTS---YNVAKAGCIHMARSLANEW 193
Query: 179 APDTRVNCVAPGFVPTHFAEYI 200
               RVN ++PG++ T  ++++
Sbjct: 194 RDFARVNSISPGYIDTGLSDFV 215

>pdb|4E6P|A Chain A, Crystal Structure Of A Probable Sorbitol Dehydrogenase (Target Psi- 012078) From Sinorhizobium Meliloti 1021 Length = 259

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 80/189 (42%), Gaps = 8/189 (4%)
Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
           KR +GK A++T S +GIG   AE    EGA+V ++    +   +A  ++   G     V 
Sbjct: 4   KRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI---GPAAYAVQ 60
Query: 68  CHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSIL 127
             V+        I  T+E  G +               +  T+ES  +KL+ INV  ++ 
Sbjct: 61  XDVTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRES-YEKLFAINVAGTLF 119
Query: 128 LLQDAAPHLQ---KGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPDT-R 183
            LQ AA       +G  ++  +S AG + ++ +A+Y                ++      
Sbjct: 120 TLQAAARQXIAQGRGGKIINXASQAGRRGEALVAIYCATKAAVISLTQSAGLDLIKHRIN 179
Query: 184 VNCVAPGFV 192
           VN +APG V
Sbjct: 180 VNAIAPGVV 188

>pdb|1XSE|A Chain A, Crystal Structure Of Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Length = 295

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 67/146 (45%), Gaps = 9/146 (6%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
            QGK  IVT +++GIG  IA  L   GA VVV++R +    EA+ K+ AR +E+     H
Sbjct: 30  LQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSK----EALQKVVARCLELGAASAH 85
Query: 70  -VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLD---KLWDINVKSS 125
            ++   +      + + + G +                L      +D   K  ++N  S 
Sbjct: 86  YIAGSMEDMTFAEEFVAEAGNLMGGLDMLILNHVLYNRLTFFHGEIDNVRKSMEVNFHSF 145
Query: 126 ILLLQDAAPHL-QKGSSVVLISSIAG 150
           ++L   A P L Q   S+ ++SS+AG
Sbjct: 146 VVLSVAAMPMLMQSQGSIAVVSSVAG 171

>pdb|3GMD|A Chain A, Structure-Based Design Of 7-Azaindole-Pyrrolidines As Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I Length = 264

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 17/150 (11%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
            QGK  IVT +++GIG  +A  L   GA VV+++R +    E + K+ +R +E+     H
Sbjct: 7   LQGKKVIVTGASKGIGREMAYHLSKMGAHVVLTARSE----EGLQKVVSRCLELGAASAH 62
Query: 70  -VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLD-------KLWDIN 121
            ++   +      Q I K GK+               I QT  S+         ++ ++N
Sbjct: 63  YIAGTMEDMTFAEQFIVKAGKL----MGGLDMLILNHITQTSLSLFHDDIHSVRRVMEVN 118
Query: 122 VKSSILLLQDAAPHL-QKGSSVVLISSIAG 150
             S +++   A P L Q   S+ +ISS+AG
Sbjct: 119 FLSYVVMSTAALPMLKQSNGSIAVISSLAG 148

>pdb|3LZ6|A Chain A, Guinea Pig 11beta Hydroxysteroid Dehydrogenase With Pf-877423 Length = 263

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 67/146 (45%), Gaps = 9/146 (6%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
            QGK  IVT +++GIG  IA  L   GA VVV++R +    EA+ K+ AR +E+     H
Sbjct: 7   LQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSK----EALQKVVARCLELGAASAH 62
Query: 70  -VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLD---KLWDINVKSS 125
            ++   +      + + + G +                L      +D   K  ++N  S 
Sbjct: 63  YIAGSMEDMTFAEEFVAEAGNLMGGLDMLILNHVLYNRLTFFHGEIDNVRKSMEVNFHSF 122
Query: 126 ILLLQDAAPHL-QKGSSVVLISSIAG 150
           ++L   A P L Q   S+ ++SS+AG
Sbjct: 123 VVLSVAAMPMLMQSQGSIAVVSSVAG 148

>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/199 (23%), Positives = 83/199 (41%), Gaps = 11/199 (5%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
            +GKVA+VT +++GIG  IAE L   GA V+ ++  +         L   G    G+  +
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNG---KGMALN 66
Query: 70  VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLL 129
           V+N +  + ++    ++FG +               +++ KE     + + N+ +SI  L
Sbjct: 67  VTNPESIEAVLKAITDEFGGV-DILVNNAGITRDNLLMRMKEEEWSDIMETNL-TSIFRL 124
Query: 130 QDAAPH---LQKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTRVN 185
             A       ++   ++ + S+ G    +  A Y                E+A     VN
Sbjct: 125 SKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVN 184
Query: 186 CVAPGFVPTHFAEYITSND 204
            VAPGF+ T   + +  ND
Sbjct: 185 TVAPGFIETDMTKAL--ND 201

>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/199 (23%), Positives = 83/199 (41%), Gaps = 11/199 (5%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
            +GKVA+VT +++GIG  IAE L   GA V+ ++  +         L   G    G+  +
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNG---KGMALN 66
Query: 70  VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLL 129
           V+N +  + ++    ++FG +               +++ KE     + + N+ +SI  L
Sbjct: 67  VTNPESIEAVLKAITDEFGGV-DILVNNADITRDNLLMRMKEEEWSDIMETNL-TSIFRL 124
Query: 130 QDAAPH---LQKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTRVN 185
             A       ++   ++ + S+ G    +  A Y                E+A     VN
Sbjct: 125 SKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVN 184
Query: 186 CVAPGFVPTHFAEYITSND 204
            VAPGF+ T   + +  ND
Sbjct: 185 TVAPGFIETDMTKAL--ND 201

>pdb|3G49|A Chain A, N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b-Hydroxysteroid Dehydrogenase Type 1: Discovery Of Pf-915275 Length = 277

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 67/146 (45%), Gaps = 9/146 (6%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
            QGK  IVT +++GIG  IA  L   GA VVV++R +    EA+ K+ AR +E+     H
Sbjct: 9   LQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSK----EALQKVVARCLELGAASAH 64
Query: 70  -VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLD---KLWDINVKSS 125
            ++   +      + + + G +                L      +D   K  ++N  S 
Sbjct: 65  YIAGSMEDMTFAEEFVAEAGNLMGGLDMLILNHVLYNRLTFFHGEIDNVRKSMEVNFHSF 124
Query: 126 ILLLQDAAPHL-QKGSSVVLISSIAG 150
           ++L   A P L Q   S+ ++SS+AG
Sbjct: 125 VVLSVAAMPMLMQSQGSIAVVSSVAG 150

>pdb|3DWF|A Chain A, Crystal Structure Of The Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Mutant F278e Length = 276

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 67/146 (45%), Gaps = 9/146 (6%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
            QGK  IVT +++GIG  IA  L   GA VVV++R +    EA+ K+ AR +E+     H
Sbjct: 9   LQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSK----EALQKVVARCLELGAASAH 64
Query: 70  -VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLD---KLWDINVKSS 125
            ++   +      + + + G +                L      +D   K  ++N  S 
Sbjct: 65  YIAGSMEDMTFAEEFVAEAGNLMGGLDMLILNHVLYNRLTFFHGEIDNVRKSMEVNFHSF 124
Query: 126 ILLLQDAAPHL-QKGSSVVLISSIAG 150
           ++L   A P L Q   S+ ++SS+AG
Sbjct: 125 VVLSVAAMPMLMQSQGSIAVVSSVAG 150

>pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadp Length = 279

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/208 (20%), Positives = 88/208 (42%), Gaps = 12/208 (5%)
Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIE--VIG 65
           +R++ ++A+VT ++ GIG  +A  L  +G  VV  +R   N++E   + K+ G    +I 
Sbjct: 28  ERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIP 87
Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSS 125
             C +SN +   ++ +    +   +               +L    S    ++++NV + 
Sbjct: 88  YRCDLSNEEDILSMFSAIRSQHSGV-DICINNAGLARPDTLLSGSTSGWKDMFNVNVLAL 146
Query: 126 ILLLQDAAPHLQK----GSSVVLISSIAGYQ--PQSSMAMYGVXXXXXXXXXXXXXXEM- 178
            +  ++A   +++       ++ I+S++G++  P S    Y                E+ 
Sbjct: 147 SICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELR 206
Query: 179 --APDTRVNCVAPGFVPTHFAEYITSND 204
                 R  C++PG V T FA  +   D
Sbjct: 207 EAQTHIRATCISPGVVETQFAFKLHDKD 234

>pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From Mycobacterium Paratuberculosis Bound To Nicotinamide Adenine Dinucleotide Length = 280

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/209 (22%), Positives = 79/209 (37%), Gaps = 18/209 (8%)
Query: 7   AKRFQGKVAIVTASTQGIGFGIAERLGLEG-------------ASVVVSSRKQKNVDEAV 53
           A   QG+VA +T + +G G   A RL  EG             ASV  +    +++DE  
Sbjct: 10  AGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETA 69
Query: 54  VKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESV 113
             ++ +G + +  V  V +    + L+   +E+FG++                  T E  
Sbjct: 70  RLVEDQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQ- 128
Query: 114 LDKLWDINVKSSILLLQDAAPHL---QKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXX 170
            D +  +N+  +   L+   P +     G S+V++SS AG +       Y          
Sbjct: 129 WDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHGLTAL 188
Query: 171 XXXXXXEMAP-DTRVNCVAPGFVPTHFAE 198
                 E+     RVN + P  V T   E
Sbjct: 189 TNTLAIELGEYGIRVNSIHPYSVETPMIE 217

>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE From Brucella Melitensis Length = 246

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 41/188 (21%), Positives = 78/188 (41%), Gaps = 7/188 (3%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
             G+ A+VT +T G+G  IA  L  +GA V +   +++ + E   +L  R   +     +
Sbjct: 5   LTGRKALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAELGER---IFVFPAN 61
Query: 70  VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLL 129
           +S+ +  K L  +  E+ G +               +  + E   D +  +N+ S   L 
Sbjct: 62  LSDREAVKALGQKAEEEMGGVDILVNNAGITRDGLFVRMSDED-WDAVLTVNLTSVFNLT 120
Query: 130 QDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNC 186
           ++    +  ++   ++ I+SI G       A Y                E+A  +  VNC
Sbjct: 121 RELTHPMMRRRNGRIINITSIVGVTGNPGQANYCASKAGLIGFSKSLAQEIASRNVTVNC 180
Query: 187 VAPGFVPT 194
           +APGF+ +
Sbjct: 181 IAPGFIES 188

>pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg From Francisella Tularensis Length = 247

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 42/68 (61%)
Query: 13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
          KVA+VT +++GIGF +A  L  +GA+VV ++  Q + ++     K +G +  G+V ++S+
Sbjct: 6  KVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSXKEKGFKARGLVLNISD 65
Query: 73 GQQRKNLI 80
           +  +N  
Sbjct: 66 IESIQNFF 73

>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 45/199 (22%), Positives = 83/199 (41%), Gaps = 11/199 (5%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
            +GKVA+VT +++GIG  IAE L   GA V+ ++  +         L   G    G+  +
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNG---KGMALN 66
Query: 70  VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLL 129
           V+N +  + ++    ++FG +               +++ KE     + + N+ +SI  L
Sbjct: 67  VTNPESIEAVLKAITDEFGGV-DILVNNAGITRDNLLMRMKEEEWSDIMETNL-TSIFRL 124
Query: 130 QDAAPH---LQKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTRVN 185
             A       ++   ++ + S+ G    +  A +                E+A     VN
Sbjct: 125 SKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANFAAAKAGVIGFTKSMAREVASRGVTVN 184
Query: 186 CVAPGFVPTHFAEYITSND 204
            VAPGF+ T   + +  ND
Sbjct: 185 TVAPGFIETDMTKAL--ND 201

>pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE FROM BRUCELLA Melitensis (P43212) Length = 249

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 41/188 (21%), Positives = 78/188 (41%), Gaps = 7/188 (3%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
             G+ A+VT +T G+G  IA  L  +GA V +   +++ + E   +L  R   +     +
Sbjct: 8   LTGRKALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAELGER---IFVFPAN 64
Query: 70  VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLL 129
           +S+ +  K L  +  E+ G +               +  + E   D +  +N+ S   L 
Sbjct: 65  LSDREAVKALGQKAEEEMGGVDILVNNAGITRDGLFVRMSDED-WDAVLTVNLTSVFNLT 123
Query: 130 QDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNC 186
           ++    +  ++   ++ I+SI G       A Y                E+A  +  VNC
Sbjct: 124 RELTHPMMRRRNGRIINITSIVGVTGNPGQANYCASKAGLIGFSKSLAQEIASRNVTVNC 183
Query: 187 VAPGFVPT 194
           +APGF+ +
Sbjct: 184 IAPGFIES 191

>pdb|1X1E|A Chain A, Crystal Structure Of Tt0495 Protein From Thermus Thermophilus Hb8 Length = 239

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 80/196 (40%), Gaps = 19/196 (9%)
Query: 15  AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQ 74
           A+VT  ++GIG  IAE L   G  V ++SR   N +EA         + +G V   ++ +
Sbjct: 5   ALVTGGSRGIGRAIAEALVARGYRVAIASR---NPEEAA--------QSLGAVPLPTDLE 53
Query: 75  Q--RKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLLQDA 132
           +   K L+ + +E  G +               +  + E     L+ +++  + LL Q A
Sbjct: 54  KDDPKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLY-LHLDVAFLLAQAA 112
Query: 133 APHLQKG--SSVVLISSIAGYQPQSSMAM--YGVXXXXXXXXXXXXXXEMAP-DTRVNCV 187
           APH+ +     V+ I S+  +     + +  Y                E A    RVN +
Sbjct: 113 APHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLL 172
Query: 188 APGFVPTHFAEYITSN 203
            PG+V T F   +  N
Sbjct: 173 CPGYVETEFTLPLRQN 188

>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 48/204 (23%), Positives = 80/204 (39%), Gaps = 13/204 (6%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG-IEVIGVVC 68
             G++A+VT  ++GIG  IA+ L   GA V + +R  +   +   +L A G  + I    
Sbjct: 27  LAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADL 86
Query: 69  HVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILL 128
               G +R   + Q + +                   +     S  +K+  +NV S    
Sbjct: 87  SSEAGARR---LAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSC 143
Query: 129 LQDAAPHLQKGSS------VVLISSIAGYQPQSSMAM-YGVXXXXXXXXXXXXXXEMAPD 181
           +Q   P L++ +S      V+ I S+AG       A  YG               E+  +
Sbjct: 144 IQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAKELVGE 203
Query: 182 -TRVNCVAPGFVPTHFAEYITSND 204
              VN +APG  P+    +I +ND
Sbjct: 204 HINVNVIAPGRFPSRMTRHI-AND 226

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	226
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	2e-89
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	4e-66
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	1e-64
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	3e-64
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	1e-61
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	7e-61
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	1e-60
1xq1_A	266	Putative tropinone reducatse; structural genomics,	2e-59
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	3e-58
1spx_A	278	Short-chain reductase family member (5L265); paral	5e-57
1xhl_A	297	Short-chain dehydrogenase/reductase family member	5e-57
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	8e-57
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	1e-56
1xkq_A	280	Short-chain reductase family member (5D234); parra	5e-56
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	1e-55
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	5e-55
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	2e-54
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	8e-54
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	1e-53
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	4e-53
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	9e-53
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	1e-52
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	3e-52
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	3e-52
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	3e-52
3imf_A	257	Short chain dehydrogenase; structural genomics, in	3e-52
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	4e-52
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	5e-52
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	6e-52
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	1e-51
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	1e-51
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	1e-51
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	1e-51
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	2e-51
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	5e-51
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	6e-51
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	9e-51
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	1e-50
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	1e-50
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	2e-50
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	3e-50
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	3e-50
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	5e-50
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	6e-50
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	8e-50
4dqx_A	277	Probable oxidoreductase protein; structural genomi	1e-49
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	1e-49
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	1e-49
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	1e-49
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	2e-49
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	2e-49
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-49
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	4e-49
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	4e-49
4e4y_A	244	Short chain dehydrogenase family protein; structur	5e-49
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	1e-48
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-48
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	1e-48
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	2e-48
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	2e-48
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	2e-48
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	2e-48
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	3e-48
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	4e-48
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	6e-48
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	6e-48
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	6e-48
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	7e-48
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	9e-48
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	1e-47
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	1e-47
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	1e-47
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	2e-47
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	2e-47
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	3e-47
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	3e-47
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	4e-47
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	4e-47
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	6e-47
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	1e-46
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	2e-46
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	2e-46
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	2e-46
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	2e-46
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	3e-46
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	3e-46
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	3e-46
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	4e-46
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	4e-46
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	5e-46
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	6e-46
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	7e-46
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	8e-46
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	1e-45
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	1e-45
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	5e-45
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	5e-45
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	7e-45
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	7e-45
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	8e-45
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	1e-44
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	2e-44
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	2e-44
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	3e-44
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	4e-44
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	4e-44
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	5e-44
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	5e-44
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	6e-44
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	6e-44
3cxt_A	291	Dehydrogenase with different specificities; rossma	8e-44
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	5e-43
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	1e-42
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	2e-42
3rih_A	293	Short chain dehydrogenase or reductase; structural	3e-42
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	4e-42
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	4e-42
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	4e-42
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	5e-42
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	5e-42
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	1e-41
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	1e-41
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	3e-41
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	7e-41
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	1e-40
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	1e-40
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	2e-40
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	5e-40
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	7e-40
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	7e-40
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	1e-39
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	2e-39
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	7e-39
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	9e-39
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	9e-39
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	2e-37
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	3e-37
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	6e-37
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	8e-37
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	1e-36
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	1e-36
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	1e-36
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	2e-36
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	3e-36
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	4e-36
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	6e-36
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-35
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	2e-35
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	3e-35
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	5e-35
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	9e-35
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	2e-34
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	6e-34
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	9e-34
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	1e-33
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	1e-33
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	3e-33
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	1e-32
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	1e-32
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	1e-32
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	3e-32
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	3e-32
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	5e-32
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	9e-32
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	2e-31
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	3e-31
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	4e-31
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	5e-31
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	6e-31
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	1e-30
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	2e-30
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	2e-30
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	2e-30
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	1e-26
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	9e-30
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	1e-29
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	5e-28
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	6e-28
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	4e-27
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	1e-26
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	4e-26
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	5e-26
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	7e-25
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	1e-24
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	1e-23
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	8e-20
4alk_A	282	ENR, enoyl-[acyl-carrier-protein] reductase [NADPH	4e-14
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	8e-14
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	1e-13
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	4e-13
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	6e-13
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	7e-13
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	7e-13
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	8e-13
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	9e-13
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	3e-12
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	1e-11
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	5e-11
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	1e-10
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	1e-10
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	5e-10
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	2e-08
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	3e-07
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	8e-06
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	2e-05
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	3e-04

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score =  263 bits (674), Expect = 2e-89
 Identities = 91/214 (42%), Positives = 133/214 (62%), Gaps = 3/214 (1%)

Query: 2   EKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI 61
             ++  K  + KVA+VTAST GIG  IA RL  +GA VVVSSRKQ+NVD  V  L+  G+
Sbjct: 4   TGVERRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGL 63

Query: 62  EVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDIN 121
            V G VCHV   + R+ L+   +   G +D++VSNAA NP   +I+   E V DK+  +N
Sbjct: 64  SVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVN 123

Query: 122 VKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMA 179
           VK+++L+ +   P +  + G SV+++SS+  Y P  ++  Y V+KTALLGLTK LA E+A
Sbjct: 124 VKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELA 183

Query: 180 PD-TRVNCVAPGFVPTHFAEYITSNDGVVSSVSS 212
           P   RVNC+APG + T+F++ +  +      +  
Sbjct: 184 PRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKE 217

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score =  204 bits (521), Expect = 4e-66
 Identities = 66/211 (31%), Positives = 107/211 (50%), Gaps = 7/211 (3%)

Query: 1   MEKMKMAKRF--QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA 58
           M       R+  +G  A+VT  ++GIG+ I E L   GA V   SR +K +DE +   + 
Sbjct: 8   MMNCNNEGRWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWRE 67

Query: 59  RGIEVIGVVCHVSNGQQRKNLINQTIEKF-GKIDVVVSNAAANPSVDSILQTKESVLDKL 117
           +G+ V G VC + +  +R  L+      F GK++++V+NA      +      E   + +
Sbjct: 68  KGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKE-AKDFTEKDYNII 126

Query: 118 WDINVKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALA 175
              N +++  L Q A P L   +  +V+ +SSIAG+    S+++Y  +K A+  +TK+LA
Sbjct: 127 MGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLA 186

Query: 176 AEMAPDT-RVNCVAPGFVPTHFAEYITSNDG 205
            E A D  RVN VAPG + T   E     + 
Sbjct: 187 CEWAKDNIRVNSVAPGVILTPLVETAIKKNP 217

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score =  200 bits (510), Expect = 1e-64
 Identities = 69/204 (33%), Positives = 108/204 (52%), Gaps = 7/204 (3%)

Query: 6   MAKRF--QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV 63
           MA R+  +G  A+VT  ++GIG+GI E L   GASV   SR QK +++ + + +++G +V
Sbjct: 1   MAGRWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKV 60

Query: 64  IGVVCHVSNGQQRKNLINQTIEKF-GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINV 122
              VC +S+  +R+ L+N     F GK++++V+NA      +            +  IN 
Sbjct: 61  EASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKE-AKDYTVEDYSLIMSINF 119

Query: 123 KSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP 180
           +++  L   A P L   +  +VV ISS++G       A+YG TK A+  LT+ LA E A 
Sbjct: 120 EAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAK 179

Query: 181 DT-RVNCVAPGFVPTHFAEYITSN 203
           D  RVN V PG + T   E    +
Sbjct: 180 DNIRVNGVGPGVIATSLVEMTIQD 203

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score =  199 bits (508), Expect = 3e-64
 Identities = 48/209 (22%), Positives = 103/209 (49%), Gaps = 2/209 (0%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
           M      KV +++     +G  +A R   +GA +V+++R  + +++   ++   G   + 
Sbjct: 5   MGGLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALS 64

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSS 125
           V   +++  Q  +L+++T++ +G++DVV++NA   PS+     T    +    ++ V  +
Sbjct: 65  VGTDITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGA 124

Query: 126 ILLLQDAAPHLQKGS-SVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-R 183
           + L+Q   P L++   +VV ++S+     Q+    Y + K+ALL +++ LA E+     R
Sbjct: 125 LRLIQGFTPALEESKGAVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATELGEKGIR 184

Query: 184 VNCVAPGFVPTHFAEYITSNDGVVSSVSS 212
           VN V PG++     +    +       S 
Sbjct: 185 VNSVLPGYIWGGTLKSYFEHQAGKYGTSV 213

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score =  193 bits (492), Expect = 1e-61
 Identities = 60/217 (27%), Positives = 95/217 (43%), Gaps = 6/217 (2%)

Query: 3   KMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA---R 59
              M   FQ +  +VT    GIG G+A  L   GASV++  R    +  AV +L+A    
Sbjct: 2   PGSMQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGAN 61

Query: 60  GIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWD 119
           G  +      ++N  +    ++      G++  VV  A  + ++  I Q       +  D
Sbjct: 62  GGAIRYEPTDITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVD 121

Query: 120 INVKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAE 177
           +NV  ++ +L+ AA  +    G S V ISSIA          YGVTK+A+  L +  A E
Sbjct: 122 LNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQLAADE 181

Query: 178 MAPDT-RVNCVAPGFVPTHFAEYITSNDGVVSSVSSL 213
           +     RVN + PG + T     IT +  + S  +  
Sbjct: 182 LGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMC 218

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score =  190 bits (486), Expect = 7e-61
 Identities = 61/195 (31%), Positives = 102/195 (52%), Gaps = 7/195 (3%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIE 62
           M M     GKVA++T S+ GIG  IAE    EGA +V+ +R+   + EA   LK + G+ 
Sbjct: 1   MDM--GISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVR 58

Query: 63  VIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINV 122
           V+ V   V+  +    ++      FG  D++V+NA      ++I++  +      W++ V
Sbjct: 59  VLEVAVDVATPEGVDAVVESVRSSFGGADILVNNAGTGS-NETIMEAADEKWQFYWELLV 117

Query: 123 KSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP 180
            +++ L +   P +  + G +++  +SI   QP     +Y VTK AL+  +K LA E+  
Sbjct: 118 MAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIK 177

Query: 181 DT-RVNCVAPGFVPT 194
           D  RVNC+ PG + T
Sbjct: 178 DNIRVNCINPGLILT 192

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score =  190 bits (485), Expect = 1e-60
 Identities = 56/195 (28%), Positives = 96/195 (49%), Gaps = 5/195 (2%)

Query: 1   MEKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG 60
           +    M +R   K+A++T +T GIG   A+R   EGA V ++ R++  +D A+ ++   G
Sbjct: 18  LYFQSMTQRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI---G 74

Query: 61  IEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDI 120
              +G+    +N  +   L  +   + G+IDV+  NA     +  + +  E   D  +D 
Sbjct: 75  GGAVGIQADSANLAELDRLYEKVKAEAGRIDVLFVNAGGGSML-PLGEVTEEQYDDTFDR 133

Query: 121 NVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP 180
           NVK  +  +Q A P L +GSSVVL  S AG     + ++Y  +K AL    +    ++  
Sbjct: 134 NVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDLKD 193

Query: 181 DT-RVNCVAPGFVPT 194
              R+N ++PG   T
Sbjct: 194 RGIRINTLSPGPTET 208

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score =  186 bits (476), Expect = 2e-59
 Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 7/210 (3%)

Query: 1   MEKMKMAKRF--QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA 58
           M   + ++R+  + K  +VT  T+GIG  I E     GA +   +R +  ++E + K + 
Sbjct: 1   MAGAEQSQRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQK 60

Query: 59  RGIEVIGVVCHVSNGQQRKNLINQTIEKFG-KIDVVVSNAAANPSVDSILQTKESVLDKL 117
           +G +V G VC  S   +R+ L+      FG K+D++++N  A  S    L          
Sbjct: 61  KGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKP-TLDYTAEDFSFH 119

Query: 118 WDINVKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALA 175
              N++S+  L Q A P L      +++ +SSIAG    S  ++Y  TK AL  L + LA
Sbjct: 120 ISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLA 179

Query: 176 AEMAPDT-RVNCVAPGFVPTHFAEYITSND 204
            E A D  R N VAP  + T  AE +  ++
Sbjct: 180 CEWASDGIRANAVAPAVIATPLAEAVYDDE 209

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score =  183 bits (468), Expect = 3e-58
 Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 9/201 (4%)

Query: 1   MEKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG 60
            + +    R  GK AI+T +  GIG  IA      GASVVVS       +  V +++  G
Sbjct: 4   SDNL----RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLG 59

Query: 61  IEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDI 120
            +     C +++ Q+   L +  I K GK+D++V+NA              +   + +++
Sbjct: 60  GQAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGG--PKPFDMPMADFRRAYEL 117

Query: 121 NVKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEM 178
           NV S   L Q  AP +    G  ++ I+S+A      +M  Y  +K A   L + +A ++
Sbjct: 118 NVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDL 177

Query: 179 APDT-RVNCVAPGFVPTHFAE 198
                RVN +APG + T   +
Sbjct: 178 GEKNIRVNGIAPGAILTDALK 198

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score =  181 bits (461), Expect = 5e-57
 Identities = 62/208 (29%), Positives = 99/208 (47%), Gaps = 9/208 (4%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIE---VI 64
            RF  KVAI+T S+ GIG   A     EGA V ++ R  + ++E   ++ A G+    V 
Sbjct: 2   TRFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVN 61

Query: 65  GVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNA---AANPSVDSILQTKESVLDKLWDIN 121
            VV  V+    +  +++ T+ KFGK+D++V+NA     +    +         D   ++N
Sbjct: 62  SVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLN 121

Query: 122 VKSSILLLQDAAPHLQKGS-SVVLISSIA-GYQPQSSMAMYGVTKTALLGLTKALAAEMA 179
           ++S I L + A PHL      +V ISSIA G         Y + K A+   T+  A ++ 
Sbjct: 122 LRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLI 181

Query: 180 PDT-RVNCVAPGFVPTHFAEYITSNDGV 206
               RVN ++PG V T F   +   +  
Sbjct: 182 QHGIRVNSISPGLVATGFGSAMGMPEET 209

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score =  182 bits (463), Expect = 5e-57
 Identities = 65/206 (31%), Positives = 100/206 (48%), Gaps = 7/206 (3%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIE---VI 64
            RF GK  I+T S+ GIG   A     EGA V ++ R +  ++E   ++   G+    + 
Sbjct: 22  ARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKIN 81

Query: 65  GVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSIL-QTKESVLDKLWDINVK 123
            VV  V+    + ++IN T+ KFGKID++V+NA AN +  +        +  K + +N +
Sbjct: 82  AVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQ 141

Query: 124 SSILLLQDAAPHLQK-GSSVVLISSI-AGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD 181
           + I + Q    HL K    +V +SSI AG Q  S    Y   K AL   T+  A ++   
Sbjct: 142 AVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQH 201

Query: 182 T-RVNCVAPGFVPTHFAEYITSNDGV 206
             RVN V+PG V T F   +   +  
Sbjct: 202 GVRVNSVSPGAVATGFMGAMGLPETA 227

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score =  180 bits (458), Expect = 8e-57
 Identities = 57/192 (29%), Positives = 94/192 (48%), Gaps = 6/192 (3%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV 63
           M M   +QGK AIV   T G+G     RL   GA V+++ R + N+     +    G  V
Sbjct: 1   MVM-GNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF---GPRV 56

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVK 123
             +   +++  +   L     +  G ID++  NA  +  ++   Q  E+  D+ + +N K
Sbjct: 57  HALRSDIADLNEIAVLGAAAGQTLGAIDLLHINAGVS-ELEPFDQVSEASYDRQFAVNTK 115

Query: 124 SSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT- 182
            +   +Q   P +++G S+V  SS+A       M++Y  +K AL+     LAAE+ P   
Sbjct: 116 GAFFTVQRLTPLIREGGSIVFTSSVADEGGHPGMSVYSASKAALVSFASVLAAELLPRGI 175

Query: 183 RVNCVAPGFVPT 194
           RVN V+PGF+ T
Sbjct: 176 RVNSVSPGFIDT 187

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score =  180 bits (458), Expect = 1e-56
 Identities = 62/191 (32%), Positives = 94/191 (49%), Gaps = 8/191 (4%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
           +  G+VA++T    G+G  + +R   EGA V V  +  + + E      A G   +GVV 
Sbjct: 2   KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELE---VAHGGNAVGVVG 58

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWD----INVKS 124
            V + Q +K    + +  FGKID ++ NA       ++    E  +D  +D    +NVK 
Sbjct: 59  DVRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKG 118

Query: 125 SILLLQDAAPHLQK-GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTR 183
            I  ++   P L     SVV   S AG+ P     +Y  TK A++GL + +A E+AP  R
Sbjct: 119 YIHAVKACLPALVSSRGSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMAFELAPHVR 178

Query: 184 VNCVAPGFVPT 194
           VN VAPG + T
Sbjct: 179 VNGVAPGGMNT 189

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score =  178 bits (455), Expect = 5e-56
 Identities = 66/209 (31%), Positives = 103/209 (49%), Gaps = 11/209 (5%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI---EVI 64
            RF  K  I+T S+ GIG   A     EGA+V ++ R  + ++E    +   G+   +V 
Sbjct: 2   PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVN 61

Query: 65  GVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWD----I 120
            VV  V+    +  +IN T+++FGKIDV+V+NA A    D+   T       ++     +
Sbjct: 62  SVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIP-DAFGTTGTDQGIDIYHKTLKL 120

Query: 121 NVKSSILLLQDAAPHLQKGS-SVVLISSI-AGYQPQSSMAMYGVTKTALLGLTKALAAEM 178
           N+++ I + +   PHL      +V +SSI AG Q Q     Y + K AL   T++ A ++
Sbjct: 121 NLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDL 180

Query: 179 APDT-RVNCVAPGFVPTHFAEYITSNDGV 206
           A    RVN V+PG V T F   +   D  
Sbjct: 181 AKFGIRVNSVSPGMVETGFTNAMGMPDQA 209

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score =  177 bits (452), Expect = 1e-55
 Identities = 63/204 (30%), Positives = 104/204 (50%), Gaps = 6/204 (2%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV 63
           M    R+ GKV +VT   +GIG GI       GA VV+  +     +     L+      
Sbjct: 1   MATGTRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKD----ESGGRALEQELPGA 56

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVK 123
           + ++C V+     K L+++TI +FG++D VV+NA  +P      +T      +L ++N+ 
Sbjct: 57  VFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLL 116

Query: 124 SSILLLQDAAPHLQKGS-SVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT 182
            +  L + A P+L+K   +V+ ISS+ G   Q+    Y  TK A+  +TKALA + +P  
Sbjct: 117 GTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYG 176

Query: 183 -RVNCVAPGFVPTHFAEYITSNDG 205
            RVNC++PG + T   E + +   
Sbjct: 177 VRVNCISPGNIWTPLWEELAALMP 200

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score =  175 bits (447), Expect = 5e-55
 Identities = 55/216 (25%), Positives = 103/216 (47%), Gaps = 3/216 (1%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
           M+K+F GKV +VT +   IG   A RL  EG ++ +    ++ +++A   ++ +G+E   
Sbjct: 1   MSKKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARS 60

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSS 125
            VC V++ +     ++  +  FGKID + +NA    +   +         ++  INV  +
Sbjct: 61  YVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGA 120

Query: 126 ILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT- 182
             +L+  +  +  Q    +V  +S+AG +   +MA YG +K A++ LT+  A ++AP   
Sbjct: 121 FHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNI 180

Query: 183 RVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPP 218
           RVN ++PG++   F                    P 
Sbjct: 181 RVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPK 216

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score =  173 bits (442), Expect = 2e-54
 Identities = 65/189 (34%), Positives = 100/189 (52%), Gaps = 5/189 (2%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
                VAIVT +  GIG  IA      GASVVV+  K +  +     ++  G + IG+ C
Sbjct: 9   HLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLEC 68

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
           +V++ Q R+ +I   +++FGKI V+V+NA              S  +  + +N+ S   L
Sbjct: 69  NVTDEQHREAVIKAALDQFGKITVLVNNAGGGG--PKPFDMPMSDFEWAFKLNLFSLFRL 126

Query: 129 LQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RVN 185
            Q AAPH+    G +++ ISS+AG      MA YG +K A+  LT+ +A ++ P   RVN
Sbjct: 127 SQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVN 186

Query: 186 CVAPGFVPT 194
            +APG + T
Sbjct: 187 AIAPGAIKT 195

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score =  173 bits (440), Expect = 8e-54
 Identities = 55/202 (27%), Positives = 91/202 (45%), Gaps = 15/202 (7%)

Query: 1   MEKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG 60
           ++   +    +GKVA VT S+ GIG+ +AE     GA V +        ++A    K  G
Sbjct: 27  LDLFSL----KGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYG 82

Query: 61  IEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSIL-QTKESVLDKLWD 119
           +      C++S+ +  +  I+Q  + FG IDV V+NA    +    +        +K+  
Sbjct: 83  VHSKAYKCNISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIIS 142

Query: 120 INVKSSILLLQDAAPHL--QKGSSVVLISSIAGY-----QPQSSMAMYGVTKTALLGLTK 172
           +++        +           S+++ SSI+G      Q Q   A Y   K A   L K
Sbjct: 143 VDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQ---APYNTAKAACTHLAK 199

Query: 173 ALAAEMAPDTRVNCVAPGFVPT 194
           +LA E AP  RVN ++PG++ T
Sbjct: 200 SLAIEWAPFARVNTISPGYIDT 221

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score =  171 bits (437), Expect = 1e-53
 Identities = 59/201 (29%), Positives = 91/201 (45%), Gaps = 12/201 (5%)

Query: 3   KMKMAK-RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI 61
            M M K R   +VAIVT   Q IG      L   GA V+++   +    +AV  L+  G 
Sbjct: 3   HMYMEKLRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGH 62

Query: 62  EVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDIN 121
           +V  VV  V+N +  +N +    E+ G++D++V+ A    S        +    K  DIN
Sbjct: 63  DVSSVVMDVTNTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDIN 122

Query: 122 VKSSILLLQDAAPHL--QKGSSVVLISSIAGY-----QPQSSMAMYGVTKTALLGLTKAL 174
           +       Q     +  QK   +V I S++G      Q Q++   Y  +K  +    ++L
Sbjct: 123 LNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAA---YNASKAGVHQYIRSL 179

Query: 175 AAEMAPD-TRVNCVAPGFVPT 194
           AAE AP   R N VAP ++ T
Sbjct: 180 AAEWAPHGIRANAVAPTYIET 200

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score =  170 bits (434), Expect = 4e-53
 Identities = 57/193 (29%), Positives = 98/193 (50%), Gaps = 8/193 (4%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
           M KR +GK A++T S +GIG   AE    EGA+V ++    +   +A  ++   G     
Sbjct: 2   MMKRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI---GPAAYA 58

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSS 125
           V   V+        I  T+E  G +D++V+NAA    +  I++      +KL+ INV  +
Sbjct: 59  VQMDVTRQDSIDAAIAATVEHAGGLDILVNNAALFD-LAPIVEITRESYEKLFAINVAGT 117

Query: 126 ILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD- 181
           +  LQ AA  +     G  ++ ++S AG + ++ +A+Y  TK A++ LT++   ++    
Sbjct: 118 LFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCATKAAVISLTQSAGLDLIKHR 177

Query: 182 TRVNCVAPGFVPT 194
             VN +APG V  
Sbjct: 178 INVNAIAPGVVDG 190

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score =  169 bits (431), Expect = 9e-53
 Identities = 55/190 (28%), Positives = 96/190 (50%), Gaps = 3/190 (1%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
           +  + KV IVT +  GIG  IA++  L  + VV     +  +++ V +L+  G EV+GV 
Sbjct: 3   QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVK 62

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
             VS  +  +  + +T E + +IDV+ +NA     V  + +  + + +++  +N+ S+  
Sbjct: 63  ADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFY 122

Query: 128 LLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RV 184
             +   P +  Q    +V  +SIAG +   + A Y V K  L+GLT+++AA       R 
Sbjct: 123 SSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRA 182

Query: 185 NCVAPGFVPT 194
             V PG V T
Sbjct: 183 VAVLPGTVKT 192

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score =  170 bits (432), Expect = 1e-52
 Identities = 45/194 (23%), Positives = 79/194 (40%), Gaps = 6/194 (3%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEV 63
                   VA+VT  + GIG    E L   GA+V   +R  + +  A   L+ R  G  +
Sbjct: 2   KPYDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARL 61

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVK 123
              VC V +  Q +          G   ++V+NA          +T +    +   +   
Sbjct: 62  FASVCDVLDALQVRAFAEACERTLGCASILVNNAGQGRVST-FAETTDEAWSEELQLKFF 120

Query: 124 SSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD 181
           S I  ++   P L  +  +++V ++S+   QP+  M      +  +  L +++A E AP 
Sbjct: 121 SVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMAFEFAPK 180

Query: 182 T-RVNCVAPGFVPT 194
             RVN +  G V +
Sbjct: 181 GVRVNGILIGLVES 194

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score =  168 bits (428), Expect = 3e-52
 Identities = 39/195 (20%), Positives = 86/195 (44%), Gaps = 5/195 (2%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVV---SSRKQKNVDEAVVKLKARG 60
           +      + KV ++    + +G   A+   LE  ++V+    ++     ++   +L+ +G
Sbjct: 3   LTKYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQG 62

Query: 61  IEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDI 120
            +V      +SN ++   L +   ++FGK+D+ ++          I++T E+  D +  I
Sbjct: 63  AKVALYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKK-PIVETSEAEFDAMDTI 121

Query: 121 NVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP 180
           N K +   ++ AA H+     ++ I++          + Y   K  +   T+A + E+  
Sbjct: 122 NNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTGFYSTYAGNKAPVEHYTRAASKELMK 181

Query: 181 -DTRVNCVAPGFVPT 194
               VN +APG + T
Sbjct: 182 QQISVNAIAPGPMDT 196

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score =  168 bits (429), Expect = 3e-52
 Identities = 57/222 (25%), Positives = 101/222 (45%), Gaps = 12/222 (5%)

Query: 1   MEKMKMAKRF--QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA 58
                M   F   G++A+VT  ++GIG  IA+ L   GA V + +R  +   +   +L A
Sbjct: 16  PRGSHMHPYFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSA 75

Query: 59  RGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLW 118
            G +   +   +S+    + L     E   ++D++V+NA  +     +     S  +K+ 
Sbjct: 76  YG-DCQAIPADLSSEAGARRLAQALGELSARLDILVNNAGTSWGAA-LESYPVSGWEKVM 133

Query: 119 DINVKSSILLLQDAAPHL------QKGSSVVLISSIAGYQPQSSMAM-YGVTKTALLGLT 171
            +NV S    +Q   P L      +  + V+ I S+AG       A  YG +K AL  L+
Sbjct: 134 QLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLS 193

Query: 172 KALAAEMAPDT-RVNCVAPGFVPTHFAEYITSNDGVVSSVSS 212
           + LA E+  +   VN +APG  P+    +I ++   + + S+
Sbjct: 194 RMLAKELVGEHINVNVIAPGRFPSRMTRHIANDPQALEADSA 235

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score =  168 bits (429), Expect = 3e-52
 Identities = 57/207 (27%), Positives = 97/207 (46%), Gaps = 6/207 (2%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV 63
             M       VA++T +  GIG   A  L  +G +V    R +  V+E   ++   G + 
Sbjct: 21  QSM-MNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQA 79

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVK 123
           I +   VS+  Q +N +   + KFG +D+VV+NA  N     I   K    D+   +N++
Sbjct: 80  IALEADVSDELQMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLR 139

Query: 124 SSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSS--MAMYGVTKTALLGLTKALAAEMA 179
            + L L    P+L  + G ++V++SSI G +  ++     Y  TK A + + + LA E+ 
Sbjct: 140 GTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALELG 199

Query: 180 PDT-RVNCVAPGFVPTHFAEYITSNDG 205
               RVN V PG + T+ ++       
Sbjct: 200 KHHIRVNAVCPGAIETNISDNTKLRHE 226

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score =  168 bits (427), Expect = 3e-52
 Identities = 47/193 (24%), Positives = 92/193 (47%), Gaps = 6/193 (3%)

Query: 7   AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGV 66
           +   + KV I+T  + G+G G+A R   EGA VV++ R ++ ++EA ++++    +++ V
Sbjct: 1   SNAMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTV 60

Query: 67  VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSI 126
              V N    + +I Q  EKFG+ID++++NAA N           +  + + +I +  + 
Sbjct: 61  QMDVRNTDDIQKMIEQIDEKFGRIDILINNAAGNFIC-PAEDLSVNGWNSVINIVLNGTF 119

Query: 127 LLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT- 182
              Q    +  +     +++ + +   +     +      K  +L +TK LA E      
Sbjct: 120 YCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTKTLAVEWGRKYG 179

Query: 183 -RVNCVAPGFVPT 194
            RVN +APG +  
Sbjct: 180 IRVNAIAPGPIER 192

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score =  168 bits (427), Expect = 4e-52
 Identities = 51/204 (25%), Positives = 92/204 (45%), Gaps = 10/204 (4%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
             +GKVA++T +  G G G+A+R    GA VV+  R +   +    ++   G   + V  
Sbjct: 6   SLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI---GDAALAVAA 62

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
            +S        +   + KFGK+D++V+NA       +    +    D++  +NV+   L+
Sbjct: 63  DISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLM 122

Query: 129 LQDAAPHLQK------GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT 182
                PH ++         ++ ++S    +P+ ++A Y  TK  ++ +TKALA E+AP  
Sbjct: 123 TSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAIELAPAK 182

Query: 183 -RVNCVAPGFVPTHFAEYITSNDG 205
            RV  + P    T         D 
Sbjct: 183 IRVVALNPVAGETPLLTTFMGEDS 206

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score =  167 bits (426), Expect = 5e-52
 Identities = 53/193 (27%), Positives = 92/193 (47%), Gaps = 3/193 (1%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK-LKARGIE 62
           M + +RF  +  +V  + + IG   A R   EGA+VV++           V  ++  G  
Sbjct: 1   MSL-QRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRS 59

Query: 63  VIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINV 122
            + +   ++N  + +  I+   +KFG+I  +V  A    +  +I +  E+   ++ D+N+
Sbjct: 60  ALAIKADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNL 119

Query: 123 KSSILLLQDAAPHLQKGSSVVLISSIAGYQ-PQSSMAMYGVTKTALLGLTKALAAEMAPD 181
            S  L  + A P + KG ++V  SS AG          Y  +K A++  T+ LA E+ P 
Sbjct: 120 TSLFLTAKTALPKMAKGGAIVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAKEVGPK 179

Query: 182 TRVNCVAPGFVPT 194
            RVN V PG + T
Sbjct: 180 IRVNAVCPGMIST 192

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score =  167 bits (425), Expect = 6e-52
 Identities = 63/197 (31%), Positives = 91/197 (46%), Gaps = 7/197 (3%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVV--SSRKQKNVDEAVVKLKARGIEVIGVVCH 69
           GKV +VT  ++GIG  I + L       VV   +R +  + +   K    G     VV  
Sbjct: 2   GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY---GDRFFYVVGD 58

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLL 129
           ++     K L+N  ++  GKID +V+NA     V ++ +   +   KL+DIN  S + L+
Sbjct: 59  ITEDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLV 118

Query: 130 QDAAPHLQKGS-SVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVA 188
             A P L+K + +VV +SS A     SS   YG +K AL      LA E     +   VA
Sbjct: 119 GIALPELKKTNGNVVFVSSDACNMYFSSWGAYGSSKAALNHFAMTLANE-ERQVKAIAVA 177

Query: 189 PGFVPTHFAEYITSNDG 205
           PG V T     I  N G
Sbjct: 178 PGIVDTDMQVNIRENVG 194

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score =  167 bits (425), Expect = 1e-51
 Identities = 57/196 (29%), Positives = 99/196 (50%), Gaps = 10/196 (5%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG--I 61
             M  + +GK A+VT ST GIG  IA  L  EGA+V+++ R+++NV+E + +++A+    
Sbjct: 2   NAMHMQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDA 61

Query: 62  EVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDIN 121
            +  VV  +   Q  +++    IEK+ K+D++++N              +    KL+++N
Sbjct: 62  ILQPVVADLGTEQGCQDV----IEKYPKVDILINNLGI-FEPVEYFDIPDEDWFKLFEVN 116

Query: 122 VKSSILLLQDAAPHLQKGSS--VVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMA 179
           + S + L +     + +     V+ I+S A   P   MA Y  TKT  L L+++LA    
Sbjct: 117 IMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEMAHYSATKTMQLSLSRSLAELTT 176

Query: 180 PDT-RVNCVAPGFVPT 194
                VN + PG   T
Sbjct: 177 GTNVTVNTIMPGSTLT 192

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score =  167 bits (425), Expect = 1e-51
 Identities = 55/207 (26%), Positives = 93/207 (44%), Gaps = 6/207 (2%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKL-KARGIEVIGVV 67
           R  GK A++T +T+GIG  IA      GA +V+S R    +D A   L +  G +V  V 
Sbjct: 17  RLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVA 76

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
             ++       L  +  E FG +DV+V+NA  +     ++ T   + D    +N+++  L
Sbjct: 77  IDLAEPDAPAELARRAAEAFGGLDVLVNNAGISHPQP-VVDTDPQLFDATIAVNLRAPAL 135

Query: 128 LLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-R 183
           L       +     G +++ ++S A   P      Y  +K  L+  TK LA E+ P   R
Sbjct: 136 LASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKAGLVMATKVLARELGPHGIR 195

Query: 184 VNCVAPGFVPTHFAEYITSNDGVVSSV 210
            N V P  V T   + +  ++   + +
Sbjct: 196 ANSVCPTVVLTEMGQRVWGDEAKSAPM 222

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score =  167 bits (426), Expect = 1e-51
 Identities = 51/189 (26%), Positives = 83/189 (43%), Gaps = 5/189 (2%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKL-KARGIEVIGVVC 68
            + KVA +T    GIGF IAE     G   V++SR    V  A  KL  A G   + +  
Sbjct: 25  LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSM 84

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
            V         ++Q +++FG+ID++++ AA N           +    + DI+   +  +
Sbjct: 85  DVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCP-AGALSFNAFKTVMDIDTSGTFNV 143

Query: 129 LQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RVN 185
            +          G  +V I++  G + Q+     G  K A+  +T+ LA E  P   RVN
Sbjct: 144 SRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVN 203

Query: 186 CVAPGFVPT 194
            +APG +  
Sbjct: 204 SLAPGPISG 212

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score =  167 bits (426), Expect = 1e-51
 Identities = 56/193 (29%), Positives = 90/193 (46%), Gaps = 4/193 (2%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
           +  R +GK+AIVT ++ GIG   A     EGA VVV++R    + E   ++   G E   
Sbjct: 2   VMSRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAA 61

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSS 125
           +   V +    + L+   + +FG +D   +NA A  ++  I         +  D N+ S+
Sbjct: 62  LAGDVGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSA 121

Query: 126 ILLLQDAAPHL--QKGSSVVLISSIAGYQ-PQSSMAMYGVTKTALLGLTKALAAEMAPDT 182
            L  +   P +    G S+   SS  G+    + +A Y  +K  L+GL +ALA E+    
Sbjct: 122 FLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGARG 181

Query: 183 -RVNCVAPGFVPT 194
            RVN + PG   T
Sbjct: 182 IRVNALLPGGTDT 194

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score =  167 bits (425), Expect = 2e-51
 Identities = 48/190 (25%), Positives = 89/190 (46%), Gaps = 6/190 (3%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVC 68
           FQGKVA +T    G+G G+   L   GA  V++SRK   +     ++ ++ G +V  + C
Sbjct: 24  FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQC 83

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
            V +    +N +++ I+  G  ++V++NAA N       +   +    + DI +  +  +
Sbjct: 84  DVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISP-TERLSPNAWKTITDIVLNGTAFV 142

Query: 129 LQDAAPHL---QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRV 184
             +    L   QKG++ + I++I        +      K  +  ++K+LAAE      R 
Sbjct: 143 TLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRF 202

Query: 185 NCVAPGFVPT 194
           N + PG + T
Sbjct: 203 NVIQPGPIKT 212

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score =  165 bits (420), Expect = 5e-51
 Identities = 59/189 (31%), Positives = 99/189 (52%), Gaps = 7/189 (3%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVS--SRKQKNVDEAVVKLKARGIEVIGVVCH 69
            KVA+VT   QGIG GI+E+L  +G  + V+   ++++   E +  ++A   + + V   
Sbjct: 2   SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLD 61

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLL 129
           V++     + I++  EK G  DV+V+NA     +  +L+  E  L +++ +NV S    +
Sbjct: 62  VTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQ-IKPLLEVTEEDLKQIYSVNVFSVFFGI 120

Query: 130 QDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVN 185
           Q A+    +      ++  +SIA  Q    ++ Y  TK A+ GLT+A A E+AP    VN
Sbjct: 121 QAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAPKGHTVN 180

Query: 186 CVAPGFVPT 194
             APG V T
Sbjct: 181 AYAPGIVGT 189

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score =  164 bits (418), Expect = 6e-51
 Identities = 52/195 (26%), Positives = 96/195 (49%), Gaps = 7/195 (3%)

Query: 7   AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIE---V 63
            +  +G+V +VT + +GIG   A      GASVV+  R + ++ E   ++K+ G     +
Sbjct: 9   PELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLI 68

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVK 123
           I +    +  QQ + L  +   +FG++D ++ NA+       + Q  +    ++  +NV 
Sbjct: 69  IALNLENATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVN 128

Query: 124 SSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD 181
           ++ +L +   P L   + +S+   SS  G + +++   YGV+K A  GL + LA E+   
Sbjct: 129 ATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAYGVSKFATEGLMQTLADELEGV 188

Query: 182 T--RVNCVAPGFVPT 194
           T  R N + PG   T
Sbjct: 189 TAVRANSINPGATRT 203

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score =  164 bits (418), Expect = 9e-51
 Identities = 59/186 (31%), Positives = 90/186 (48%), Gaps = 5/186 (2%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           KVA+VT + QGIG  IA RL  +G +V ++            ++   G   + V   VS+
Sbjct: 3   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD 62

Query: 73  GQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDA 132
             Q    + Q  +  G  DV+V+NA   P    I      ++DK+++INVK  I  +Q A
Sbjct: 63  RDQVFAAVEQARKTLGGFDVIVNNAGVAP-STPIESITPEIVDKVYNINVKGVIWGIQAA 121

Query: 133 APHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RVNCVA 188
               +K   G  ++   S AG+     +A+Y  +K A+ GLT+  A ++AP    VN   
Sbjct: 122 VEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYC 181

Query: 189 PGFVPT 194
           PG V T
Sbjct: 182 PGIVKT 187

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score =  164 bits (418), Expect = 1e-50
 Identities = 50/194 (25%), Positives = 86/194 (44%), Gaps = 5/194 (2%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI--EV 63
              RF  +V ++T    G+G   A RL  EGA + +     + ++ +   +       EV
Sbjct: 7   PTTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEV 66

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVK 123
           +  V  VS+  Q +  +  T E+FG+ID   +NA      +       +  DK+  IN++
Sbjct: 67  LTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLR 126

Query: 124 SSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD 181
              L L+     +  Q    VV  +S+ G +   + + Y   K  ++GLT+  A E    
Sbjct: 127 GVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRY 186

Query: 182 T-RVNCVAPGFVPT 194
             R+N +APG + T
Sbjct: 187 GIRINAIAPGAIWT 200

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score =  165 bits (420), Expect = 1e-50
 Identities = 57/194 (29%), Positives = 91/194 (46%), Gaps = 5/194 (2%)

Query: 5   KMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVI 64
                F G+ A+VT    GIG   A      GA +V+S   Q  +++AV  L+ +G +  
Sbjct: 24  GFLSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAH 83

Query: 65  GVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKS 124
           GVVC V +  +   L ++     G +DVV SNA    +   + Q        + DI++  
Sbjct: 84  GVVCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVA-GPLAQMNHDDWRWVIDIDLWG 142

Query: 125 SILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD 181
           SI  ++   P L +   G  +   +S AG  P + +  YGV K  ++GL + LA E+ P+
Sbjct: 143 SIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAREVKPN 202

Query: 182 T-RVNCVAPGFVPT 194
              V+ + P  V T
Sbjct: 203 GIGVSVLCPMVVET 216

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score =  163 bits (416), Expect = 2e-50
 Identities = 44/189 (23%), Positives = 89/189 (47%), Gaps = 7/189 (3%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVC 68
           QGK+A+VTA + G+GF  A  L   GA +++ SR ++ ++ A  ++ +   G +V  V  
Sbjct: 6   QGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAG 65

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
            +        L  +     G  D++V +          ++      D+ + +  +S++ +
Sbjct: 66  DIREPGDIDRLF-EKARDLGGADILVYSTGGPRPGR-FMELGVEDWDESYRLLARSAVWV 123

Query: 129 LQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RVN 185
            + AA  +  +    +V I S+   +P   +A+  + +  ++G+ + LA E+AP    VN
Sbjct: 124 GRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLALELAPHGVTVN 183

Query: 186 CVAPGFVPT 194
            V P  + T
Sbjct: 184 AVLPSLILT 192

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score =  163 bits (415), Expect = 3e-50
 Identities = 58/196 (29%), Positives = 86/196 (43%), Gaps = 8/196 (4%)

Query: 3   KMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIE 62
            M       G+ AIVT  ++GIG  IA  L   GA+V ++          V  L+  G  
Sbjct: 3   HMAGIFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGG-- 60

Query: 63  VIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINV 122
              V   V+        + + I+  G  D++ +NA  +  +   +   +   D  +D+N 
Sbjct: 61  -FAVEVDVTKRASVDAAMQKAIDALGGFDLLCANAGVST-MRPAVDITDEEWDFNFDVNA 118

Query: 123 KSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMA 179
           +   L  Q A  H         +V  +S+A       +A Y  +K A+ G T+ALA EMA
Sbjct: 119 RGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMA 178

Query: 180 PD-TRVNCVAPGFVPT 194
           P   RVNCV PGFV T
Sbjct: 179 PKNIRVNCVCPGFVKT 194

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score =  163 bits (415), Expect = 3e-50
 Identities = 58/197 (29%), Positives = 102/197 (51%), Gaps = 4/197 (2%)

Query: 1   MEKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK-LKAR 59
            + M  +    GK A VT  ++GIG  IA+RL LEGA+V ++        +AVV  ++  
Sbjct: 20  FQSMMTSISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQA 79

Query: 60  GIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWD 119
           G   + +     + +  +  I +T+E  G +D++V++A    S   + +T  +  D++  
Sbjct: 80  GGRAVAIRADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSA-PLEETTVADFDEVMA 138

Query: 120 INVKSSILLLQDAAPHLQKGSSVVLISS-IAGYQPQSSMAMYGVTKTALLGLTKALAAEM 178
           +N ++  + ++ A+ HL  G  ++ I S +A   P   +++Y  +K AL GLTK LA ++
Sbjct: 139 VNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVPWPGISLYSASKAALAGLTKGLARDL 198

Query: 179 AP-DTRVNCVAPGFVPT 194
            P    VN V PG   T
Sbjct: 199 GPRGITVNIVHPGSTDT 215

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score =  162 bits (413), Expect = 5e-50
 Identities = 61/190 (32%), Positives = 104/190 (54%), Gaps = 7/190 (3%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGVVC 68
            Q K A+VT S++G+G   A RL   G ++V++ +R +K   E   +++  G++V+ V  
Sbjct: 2   EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKA 61

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDS-ILQTKESVLDKLWDINVKSSIL 127
           +V    + K +  Q  E FG++DV V+NAA+   V   +++ +E+  D   +IN K+ + 
Sbjct: 62  NVGQPAKIKEMFQQIDETFGRLDVFVNNAASG--VLRPVMELEETHWDWTMNINAKALLF 119

Query: 128 LLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RV 184
             Q+AA  +    G  +V ISS+   +   +    GV+K AL  LT+ LA E++P    V
Sbjct: 120 CAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELSPKQIIV 179

Query: 185 NCVAPGFVPT 194
           N V+ G + T
Sbjct: 180 NAVSGGAIDT 189

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score =  162 bits (412), Expect = 6e-50
 Identities = 43/194 (22%), Positives = 80/194 (41%), Gaps = 5/194 (2%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG---IE 62
                  ++ +VT ++ GIG   A      GA+V++  R ++ + +    +        +
Sbjct: 6   KQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQ 65

Query: 63  VIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINV 122
              +       +  + L  +    + ++D V+ NA     V  + +    V   +  +NV
Sbjct: 66  WFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNV 125

Query: 123 KSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP 180
            ++ +L Q   P L      S+V  SS  G Q +++   Y  +K A  G+ + LA E   
Sbjct: 126 NATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEYQQ 185

Query: 181 DTRVNCVAPGFVPT 194
             RVNC+ PG   T
Sbjct: 186 RLRVNCINPGGTRT 199

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score =  162 bits (412), Expect = 8e-50
 Identities = 58/197 (29%), Positives = 99/197 (50%), Gaps = 12/197 (6%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK-LKARGIEVI 64
           M K  +GKV ++T S+ G+G  +A R   E A VVV+ R +++   +V++ +K  G E I
Sbjct: 1   MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAI 60

Query: 65  GVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNA---AANPSVDSILQTKESVLDKLWDIN 121
            V   V+      NL+   I++FGK+DV+++NA             +   S  +K+ D N
Sbjct: 61  AVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVS----SHEMSLSDWNKVIDTN 116

Query: 122 VKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEM 178
           +  + L  ++A  +  +     +V+ +SS+    P      Y  +K  +  +T+ LA E 
Sbjct: 117 LTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEY 176

Query: 179 APDT-RVNCVAPGFVPT 194
           AP   RVN + PG + T
Sbjct: 177 APKGIRVNNIGPGAINT 193

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score =  162 bits (412), Expect = 1e-49
 Identities = 53/198 (26%), Positives = 93/198 (46%), Gaps = 8/198 (4%)

Query: 1   MEKMKM-AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR 59
            E +   +     +V IVT    GIG   AE     GA VVV+   +        ++   
Sbjct: 15  TENLYFQSMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI--- 71

Query: 60  GIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWD 119
           G +  GV   VS+ +  ++++ +T  K+G++DV+V+NA       +++   E   D++  
Sbjct: 72  GSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDVLVNNAGFGT-TGNVVTIPEETWDRIMS 130

Query: 120 INVKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAE 177
           +NVK   L  +   P +    G S++  +S       +    Y  +K A+  LT+A+A +
Sbjct: 131 VNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADRTAYVASKGAISSLTRAMAMD 190

Query: 178 MAPDT-RVNCVAPGFVPT 194
            A +  RVN VAPG + +
Sbjct: 191 HAKEGIRVNAVAPGTIDS 208

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score =  161 bits (411), Expect = 1e-49
 Identities = 63/203 (31%), Positives = 100/203 (49%), Gaps = 4/203 (1%)

Query: 2   EKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI 61
           +   M     G+VA+VT +++GIG  IA +LG  GA VV+++R  + +     ++ A G 
Sbjct: 20  DDKHM-SSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGG 78

Query: 62  EVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDIN 121
           E     C +S+           +   G+ DV+V+NA        +   K +  D L  +N
Sbjct: 79  EAESHACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVN 138

Query: 122 VKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMA 179
           +K+  LLL+  AP +   K   ++ ISS+AG  P +  A Y  +K  L GL  + A E+ 
Sbjct: 139 LKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKWGLNGLMTSAAEELR 198

Query: 180 PDT-RVNCVAPGFVPTHFAEYIT 201
               RV+ VAPG V T F   ++
Sbjct: 199 QHQVRVSLVAPGSVRTEFGVGLS 221

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score =  161 bits (409), Expect = 1e-49
 Identities = 56/192 (29%), Positives = 92/192 (47%), Gaps = 6/192 (3%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
           M +R + K+A++T    GIG  IAER  +EGA + ++        EA   ++  G  V+ 
Sbjct: 1   MTQRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADL--VPAPEAEAAIRNLGRRVLT 58

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSS 125
           V C VS     +    Q I  FG+ D++V+NA   P +    +       K ++INV S 
Sbjct: 59  VKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLI-PFDELTFEQWKKTFEINVDSG 117

Query: 126 ILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT- 182
            L+ +   P +       ++ ++S   +    +   Y  TK A +G T+ALA+++  D  
Sbjct: 118 FLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGI 177

Query: 183 RVNCVAPGFVPT 194
            VN +AP  V T
Sbjct: 178 TVNAIAPSLVRT 189

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score =  161 bits (410), Expect = 1e-49
 Identities = 38/188 (20%), Positives = 72/188 (38%), Gaps = 9/188 (4%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
                  ++T ++Q +G   A RL   G  V++S R +      + +  A     + +  
Sbjct: 24  TLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGA-----VALYG 78

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
             S        I+    +   +  VV NA+    +      +     +++ +++ +  L+
Sbjct: 79  DFSCETGIMAFIDLLKTQTSSLRAVVHNASEW--LAETPGEEADNFTRMFSVHMLAPYLI 136

Query: 129 LQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNC 186
                P L   + + +V IS     +  S    Y  TK  L  LT + AA  AP  +VN 
Sbjct: 137 NLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYCATKAGLESLTLSFAARFAPLVKVNG 196

Query: 187 VAPGFVPT 194
           +AP  +  
Sbjct: 197 IAPALLMF 204

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score =  161 bits (410), Expect = 2e-49
 Identities = 54/196 (27%), Positives = 94/196 (47%), Gaps = 4/196 (2%)

Query: 2   EKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARG 60
            +  +  R  GKVA+VT S +GIG  +A  LG  GA VVV+ +   K+ ++ V ++KA G
Sbjct: 8   SETYIPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALG 67

Query: 61  IEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDI 120
            + I +   +    +   L +Q +  FG +D+ VSN+        +    E   D+++ +
Sbjct: 68  SDAIAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFG-HLKDVTEEEFDRVFSL 126

Query: 121 NVKSSILLLQDAAPHLQKGSSVVLISSI-AGYQPQSSMAMYGVTKTALLGLTKALAAEMA 179
           N +    + ++A  HL +G  +VL SS  +        ++Y  +K A+    +  + +  
Sbjct: 127 NTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIFSKDCG 186

Query: 180 P-DTRVNCVAPGFVPT 194
                VN VAPG   T
Sbjct: 187 DKKITVNAVAPGGTVT 202

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score =  161 bits (410), Expect = 2e-49
 Identities = 61/192 (31%), Positives = 99/192 (51%), Gaps = 4/192 (2%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVI 64
            +K   GKVA+ T + +GIG GIA  LG  GASVVV+     K  +E V +LK  G + +
Sbjct: 15  ASKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGV 74

Query: 65  GVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKS 124
            +   +S   +   L ++ +  FG +D V+SN+         L+  + + DK++++N + 
Sbjct: 75  AIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGME-VWCDELEVTQELFDKVFNLNTRG 133

Query: 125 SILLLQDAAPHLQKGSSVVLISSIAG-YQPQSSMAMYGVTKTALLGLTKALAAEMAP-DT 182
              + Q    H ++G  ++L SSIA       + A+Y  +K A+ G  +A A +      
Sbjct: 134 QFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGV 193

Query: 183 RVNCVAPGFVPT 194
            VNC+APG V T
Sbjct: 194 TVNCIAPGGVKT 205

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score =  161 bits (410), Expect = 2e-49
 Identities = 59/186 (31%), Positives = 98/186 (52%), Gaps = 3/186 (1%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGVVCH 69
             KVAIVT +++GIG  IA RL  +G +VV++ + K    +E   K++A G + +     
Sbjct: 26  TNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQAD 85

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLL 129
           VS+    + L     E FG +DV+V+NA   P   +I +T ++V D++  +N+K +   L
Sbjct: 86  VSDPAAVRRLFATAEEAFGGVDVLVNNAGIMPLT-TIAETGDAVFDRVIAVNLKGTFNTL 144

Query: 130 QDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVA 188
           ++AA  L+ G  ++ +S+        S  +Y   K  +  +T  L+ E+   D  VN VA
Sbjct: 145 REAAQRLRVGGRIINMSTSQVGLLHPSYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVA 204

Query: 189 PGFVPT 194
           PG   T
Sbjct: 205 PGPTAT 210

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score =  160 bits (408), Expect = 4e-49
 Identities = 57/194 (29%), Positives = 96/194 (49%), Gaps = 7/194 (3%)

Query: 5   KMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVI 64
            M    + KVAI+T +  GIG   +  L   GA VV++   + ++  A     + G   +
Sbjct: 4   SMTAELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAA---ASVGRGAV 60

Query: 65  GVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAA-ANPSVDSILQTKESVLDKLWDINVK 123
             V  ++N    + LI+ TI+ FG++D+V +NAA ++P+   + Q    V D  + +N +
Sbjct: 61  HHVVDLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNAR 120

Query: 124 SSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD 181
            ++L+ + A P L    G ++V ISS   +        Y  TK A+  LT+ +A +    
Sbjct: 121 GTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYGRH 180

Query: 182 T-RVNCVAPGFVPT 194
             R N +APG V T
Sbjct: 181 GVRCNAIAPGLVRT 194

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score =  159 bits (406), Expect = 4e-49
 Identities = 59/194 (30%), Positives = 96/194 (49%), Gaps = 8/194 (4%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
            + RF+ KV IVT S  GIG   AE L  EGA+VVV+    +  +    ++ A G   I 
Sbjct: 3   GSMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAIS 62

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSV--DSILQTKESVLDKLWDINVK 123
           V   VS+ +  K + ++T+ +FG ID +V+NAA    +  D +L        K   +N+ 
Sbjct: 63  VAVDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLD 122

Query: 124 SSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD 181
            ++   +     +  + G ++V  SS A +        YG+ K  + GLT+ L+ E+   
Sbjct: 123 GALWCTRAVYKKMTKRGGGAIVNQSSTAAWLYS---NYYGLAKVGINGLTQQLSRELGGR 179

Query: 182 T-RVNCVAPGFVPT 194
             R+N +APG + T
Sbjct: 180 NIRINAIAPGPIDT 193

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score =  160 bits (406), Expect = 5e-49
 Identities = 46/186 (24%), Positives = 81/186 (43%), Gaps = 13/186 (6%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
                 +VT  ++GIG  + E L       V++   Q++     +K          +   
Sbjct: 2   NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAENLK---------FIKAD 52

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLL 129
           ++  Q   N+++    K    D +  NA       SI       + K+ D+NV SSI  +
Sbjct: 53  LTKQQDITNVLDII--KNVSFDGIFLNAGILIK-GSIFDIDIESIKKVLDLNVWSSIYFI 109

Query: 130 QDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RVNCVA 188
           +    +L+ G+S+V   S   +  + +   Y ++K A+  +TK+LA ++A    RVN V 
Sbjct: 110 KGLENNLKVGASIVFNGSDQCFIAKPNSFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVC 169

Query: 189 PGFVPT 194
           PG V T
Sbjct: 170 PGTVDT 175

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score =  160 bits (406), Expect = 1e-48
 Identities = 57/202 (28%), Positives = 99/202 (49%), Gaps = 11/202 (5%)

Query: 2   EKMKMAKRF--QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR 59
             M +   F   GK A++T ++ GIG  +A      GA V V++R    +     ++   
Sbjct: 20  GSMSVLDLFDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGV 79

Query: 60  GIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWD 119
           G + + + C V+   Q + +++Q   + G ID+ V NA        +L        ++ D
Sbjct: 80  GGKALPIRCDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQA-MLDMPLEEFQRIQD 138

Query: 120 INVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQ---PQSSMAMYGVTKTALLGLTKA 173
            NV    L  Q AA  +     G +++  +S++G+    PQ  ++ Y  +K A++ LTKA
Sbjct: 139 TNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQ-QVSHYCTSKAAVVHLTKA 197

Query: 174 LAAEMAPD-TRVNCVAPGFVPT 194
           +A E+AP   RVN V+PG++ T
Sbjct: 198 MAVELAPHQIRVNSVSPGYIRT 219

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score =  160 bits (406), Expect = 1e-48
 Identities = 54/192 (28%), Positives = 91/192 (47%), Gaps = 6/192 (3%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVV 67
             +G++A+VT    G+G GIA+ L  EG SVV++ R+   +D A  ++  R G  V  VV
Sbjct: 30  SGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVV 89

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
           C V +  Q   L      +F ++D++V+NA +N     + +      + +   N+  + L
Sbjct: 90  CDVGDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFL 149

Query: 128 LLQDAAPHLQK----GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DT 182
             Q A   ++     G  ++   SI+   P+ + A Y  TK A+ GLTK+ A +    D 
Sbjct: 150 CTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYTATKHAITGLTKSTALDGRMHDI 209

Query: 183 RVNCVAPGFVPT 194
               +  G   T
Sbjct: 210 ACGQIDIGNAAT 221

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score =  160 bits (406), Expect = 1e-48
 Identities = 53/190 (27%), Positives = 95/190 (50%), Gaps = 4/190 (2%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGV 66
              +GKVA+VT + +GIG  +A  LG  G  V+V+ +   ++ +E V  +K  G +   V
Sbjct: 25  ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACV 84

Query: 67  VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSI 126
             +V   +    +  + ++ FGK+D+V SN+        +        D+++ IN +   
Sbjct: 85  KANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVS-FGHVKDVTPEEFDRVFTINTRGQF 143

Query: 127 LLLQDAAPHLQKGSSVVLISSIAG-YQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRV 184
            + ++A  HL+ G  ++L+ SI G  +     A+Y  +K A+    + +A +MA     V
Sbjct: 144 FVAREAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITV 203

Query: 185 NCVAPGFVPT 194
           N VAPG + T
Sbjct: 204 NVVAPGGIKT 213

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score =  159 bits (404), Expect = 2e-48
 Identities = 59/194 (30%), Positives = 96/194 (49%), Gaps = 6/194 (3%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
              R Q KVAI+T    GIG   A+     GA VV++     +  +    + +    +  
Sbjct: 10  STNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPD-VISF 68

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAA-ANPSVDSILQTKESVLDKLWDINVKS 124
           V C V+  +  +NL++ TI K GK+D++  N    + +  SIL+       ++ DINV  
Sbjct: 69  VHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYG 128

Query: 125 SILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAM-YGVTKTALLGLTKALAAEMAPD 181
           + L+ + AA  +   K  S+V  +SI+ +     ++  Y  TK A+LGLT +L  E+   
Sbjct: 129 AFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEY 188

Query: 182 T-RVNCVAPGFVPT 194
             RVNCV+P  V +
Sbjct: 189 GIRVNCVSPYIVAS 202

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score =  158 bits (402), Expect = 2e-48
 Identities = 52/218 (23%), Positives = 94/218 (43%), Gaps = 11/218 (5%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHV 70
            G+V +VT +++GIG GIA +L   GA+V ++ R    +     + ++ G + + VVC  
Sbjct: 4   NGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDS 63

Query: 71  SNGQQRKNLINQT-IEKFGKIDVVVSNAAANPSVDS------ILQTKESVLDKLWDINVK 123
           S   + ++L  Q   E+ G++DV+V+NA A              +T  S+ D + ++ ++
Sbjct: 64  SQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLR 123

Query: 124 SSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP- 180
                    A  +       +V+ISS    Q   ++  YGV K A   L    A E+   
Sbjct: 124 GHYFCSVYGARLMVPAGQGLIVVISSPGSLQYMFNVP-YGVGKAACDKLAADCAHELRRH 182

Query: 181 DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPP 218
                 + PG V T   +   + + V+      +    
Sbjct: 183 GVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSA 220

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score =  158 bits (402), Expect = 2e-48
 Identities = 54/193 (27%), Positives = 87/193 (45%), Gaps = 15/193 (7%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV 63
           M      + KV IVT ++ GIG  IAER   EG+ V+  S                  + 
Sbjct: 1   MGF-SDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-----------EAKY 48

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVK 123
             + C V+N  Q K  I+   +++G I V+V+NA        I         ++ D+N+ 
Sbjct: 49  DHIECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIES-YGKIESMSMGEWRRIIDVNLF 107

Query: 124 SSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD 181
                 + A P++   +  S+V ISS+       + + Y  +K A++GLTK++A + AP 
Sbjct: 108 GYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAPL 167

Query: 182 TRVNCVAPGFVPT 194
            R N V P  + T
Sbjct: 168 LRCNAVCPATIDT 180

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score =  158 bits (402), Expect = 2e-48
 Identities = 53/199 (26%), Positives = 91/199 (45%), Gaps = 10/199 (5%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK-LKARGIEVI 64
           M    +GK  ++T S+QGIG   A      GA V +  RK     +  +  ++A G +  
Sbjct: 1   MFPDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAA 60

Query: 65  GVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKS 124
                ++  +  + L+++ + KFG IDV+++NA        + +  ++  D + D N++S
Sbjct: 61  FFAADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRS 120

Query: 125 SILLLQDAAPHL-------QKGSSVVLISSIAGYQ-PQSSMAMYGVTKTALLGLTKALAA 176
            ++  + A PHL        + S+V+   SIAG+        +YG  K  L  + K    
Sbjct: 121 VVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYGAAKAFLHNVHKNWVD 180

Query: 177 EMAPD-TRVNCVAPGFVPT 194
               D  R N V+PG V T
Sbjct: 181 FHTKDGVRFNIVSPGTVDT 199

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score =  158 bits (403), Expect = 3e-48
 Identities = 59/194 (30%), Positives = 95/194 (48%), Gaps = 8/194 (4%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV 63
           M       GKVAIVT +  GIG  +A RL  EG  V+ +       D A  K+   G   
Sbjct: 22  MNH-PDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI---GCGA 77

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVK 123
                 VS+ QQ   +++  +  FG +D +V+NA     + S++ T     D++  IN++
Sbjct: 78  AACRVDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVH-LASLIDTTVEDFDRVIAINLR 136

Query: 124 SSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD 181
            + L  + AAP +  + G ++V +SS+AG         YG++K  ++ L++  AAE+   
Sbjct: 137 GAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELRSS 196

Query: 182 T-RVNCVAPGFVPT 194
             R N + P FV T
Sbjct: 197 GIRSNTLLPAFVDT 210

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score =  157 bits (399), Expect = 4e-48
 Identities = 57/189 (30%), Positives = 87/189 (46%), Gaps = 6/189 (3%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKL-KARGIEVIGVVCHV 70
            +VAIVT ++ G G  IA R    G  V       + ++E       A   +V+ V   V
Sbjct: 2   SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADV 61

Query: 71  SNGQQRKNLINQTIEKFGKIDVVVSNA--AANPSVDSILQTKESVLDKLWDINVKSSILL 128
           ++       I  T+E+FG IDV+V+NA    N     +  T     DK+  +NV+   L 
Sbjct: 62  ADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLG 121

Query: 129 LQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RVN 185
            +   PH+  Q    +V I+S+A        + Y  +K A+L LTK++A + A    R N
Sbjct: 122 CRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCN 181

Query: 186 CVAPGFVPT 194
            V PG + T
Sbjct: 182 AVCPGMIET 190

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score =  158 bits (402), Expect = 6e-48
 Identities = 54/193 (27%), Positives = 94/193 (48%), Gaps = 3/193 (1%)

Query: 5   KMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVD-EAVVKL-KARGIE 62
             + R + + A+VT    GIG   A     EGA V ++    +  D + V  L +  G +
Sbjct: 42  VGSGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRK 101

Query: 63  VIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINV 122
            + +   +S+    ++L+++  E  G +D++   A    ++  I         + + +NV
Sbjct: 102 AVLLPGDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNV 161

Query: 123 KSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD- 181
            +   + Q+A P L KG+S++  SSI  YQP   +  Y  TK A+L  ++ LA ++A   
Sbjct: 162 FALFWITQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKG 221

Query: 182 TRVNCVAPGFVPT 194
            RVN VAPG + T
Sbjct: 222 IRVNIVAPGPIWT 234

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score =  157 bits (400), Expect = 6e-48
 Identities = 60/209 (28%), Positives = 105/209 (50%), Gaps = 7/209 (3%)

Query: 2   EKMKMAKRFQGKVAIVT-ASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG 60
           +++      +GKV +VT A+  GIG   A R  LEGA VV+S   ++ + E   +L   G
Sbjct: 12  KEIDGHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLG 71

Query: 61  I-EVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWD 119
           +  V  VVC V++ +    LI QT+EK G++DV+V+NA        ++   +   D++ +
Sbjct: 72  LGRVEAVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTP-VVDMTDEEWDRVLN 130

Query: 120 INVKSSILLLQDAAPHL---QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAA 176
           + + S +   + A  +      G  +V  +S+ G++ Q S + Y   K  ++ LT+  A 
Sbjct: 131 VTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAI 190

Query: 177 EMAPD-TRVNCVAPGFVPTHFAEYITSND 204
           E      R+N V+P      F E  +S++
Sbjct: 191 EAVEFGVRINAVSPSIARHKFLEKTSSSE 219

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score =  157 bits (400), Expect = 6e-48
 Identities = 58/199 (29%), Positives = 98/199 (49%), Gaps = 19/199 (9%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEV 63
           MA    GKVA+VT + QGIG   AE L L+GA V +     +   +    L  +    + 
Sbjct: 1   MAHMVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKT 60

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVK 123
           + + C V++ QQ ++   + ++ FG++D++V+NA        +    E   +K   IN+ 
Sbjct: 61  LFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAG-------V--NNEKNWEKTLQINLV 111

Query: 124 SSILLLQDAAPHLQK-----GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTK--ALAA 176
           S I        ++ K     G  ++ +SS+AG  P +   +Y  +K  ++G T+  ALAA
Sbjct: 112 SVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAA 171

Query: 177 EMAPDT-RVNCVAPGFVPT 194
            +     R+N + PGFV T
Sbjct: 172 NLMNSGVRLNAICPGFVNT 190

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score =  156 bits (398), Expect = 7e-48
 Identities = 52/190 (27%), Positives = 90/190 (47%), Gaps = 10/190 (5%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
             F GK  +VT   +GIG  IA+    EGA V +             ++ A  I      
Sbjct: 2   GLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDL-----RPEGKEV-AEAIGGAFFQ 55

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
             + + ++R   + +     G++DV+V+NAA      S L  +     ++ ++N+ + + 
Sbjct: 56  VDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAP-GSALTVRLPEWRRVLEVNLTAPMH 114

Query: 128 LLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RV 184
           L   AA  +    G ++V ++S+ G   +   A Y  +K  L+ LT++LA ++AP   RV
Sbjct: 115 LSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRV 174

Query: 185 NCVAPGFVPT 194
           N VAPG + T
Sbjct: 175 NAVAPGAIAT 184

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score =  156 bits (398), Expect = 9e-48
 Identities = 50/195 (25%), Positives = 96/195 (49%), Gaps = 7/195 (3%)

Query: 6   MAKRF--QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV 63
           M   F   GK A+VT S +G+GF  AE L   GA V+++  +   + E+V  L  +G + 
Sbjct: 1   MTALFDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDA 60

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVK 123
            GV   V++    +   ++   +   +D++++NA        +++ +     K+ D N+ 
Sbjct: 61  HGVAFDVTDELAIEAAFSKLDAEGIHVDILINNAGIQYRKP-MVELELENWQKVIDTNLT 119

Query: 124 SSILLLQDAAPH-LQKGS--SVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP 180
           S+ L+ + AA   + + S   ++ I S+     + ++A Y   K  +  LT ++AAE A 
Sbjct: 120 SAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQ 179

Query: 181 D-TRVNCVAPGFVPT 194
              + N + PG++ T
Sbjct: 180 FNIQTNAIGPGYILT 194

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score =  156 bits (397), Expect = 1e-47
 Identities = 35/204 (17%), Positives = 78/204 (38%), Gaps = 6/204 (2%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
           M+   +     V  +   IG  IA++   EG +V    R  + +   V +++A G  ++ 
Sbjct: 1   MSLTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVA 60

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSS 125
                 N  +    +    +    ++V + N  AN +   IL+T + V  K+W++   + 
Sbjct: 61  RSLDARNEDEVTAFL-NAADAHAPLEVTIFNVGANVN-FPILETTDRVFRKVWEMACWAG 118

Query: 126 ILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-- 181
            +  +++A  +       +    + A  +  S  A +   K  L  + +++A E+ P   
Sbjct: 119 FVSGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASAKFGLRAVAQSMARELMPKNI 178

Query: 182 TRVNCVAPGFVPTHFAEYITSNDG 205
              + +    V T +         
Sbjct: 179 HVAHLIIDSGVDTAWVRERREQMF 202

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score =  156 bits (396), Expect = 1e-47
 Identities = 53/195 (27%), Positives = 92/195 (47%), Gaps = 15/195 (7%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV 63
           M++     G+  +VT + +GIG G  + L   GA VV  SR Q ++D  V         +
Sbjct: 1   MEL--FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLV----RECPGI 54

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVK 123
             V   + + +       + +   G +D++V+NAA        L+  +   D+ +++N++
Sbjct: 55  EPVCVDLGDWEA----TERALGSVGPVDLLVNNAAVALLQP-FLEVTKEAFDRSFEVNLR 109

Query: 124 SSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP 180
           + I + Q  A  L       ++V +SS    +  ++ ++Y  TK AL  LTK +A E+ P
Sbjct: 110 AVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGP 169

Query: 181 D-TRVNCVAPGFVPT 194
              RVN V P  V T
Sbjct: 170 HKIRVNAVNPTVVMT 184

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score =  156 bits (396), Expect = 1e-47
 Identities = 51/195 (26%), Positives = 86/195 (44%), Gaps = 15/195 (7%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV 63
           MK+   F G  A+VT + +GIG    + L   GA VV  +R   ++             +
Sbjct: 1   MKL--NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLA----KECPGI 54

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVK 123
             V   + +         + +   G +D++V+NAA        L+  +   D+ + +N++
Sbjct: 55  EPVCVDLGDWDA----TEKALGGIGPVDLLVNNAALVIMQP-FLEVTKEAFDRSFSVNLR 109

Query: 124 SSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP 180
           S   + Q  A  +       S+V +SS+  +    ++  Y  TK A+  LTKA+A E+ P
Sbjct: 110 SVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGP 169

Query: 181 DT-RVNCVAPGFVPT 194
              RVN V P  V T
Sbjct: 170 HKIRVNSVNPTVVLT 184

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score =  155 bits (395), Expect = 2e-47
 Identities = 33/189 (17%), Positives = 63/189 (33%), Gaps = 15/189 (7%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
               K  +V   +  +G  + +    +  + +    ++    +                 
Sbjct: 19  SHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADHSFT------------I 66

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
             S  ++ K++I +   K  K+D  V  A      ++        +  + D+N+ S+   
Sbjct: 67  KDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFAS 126

Query: 129 LQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT---RVN 185
               A  L +G   VL  + A     S M  YG TK A   + K LA+E           
Sbjct: 127 AHIGAKLLNQGGLFVLTGASAALNRTSGMIAYGATKAATHHIIKDLASENGGLPAGSTSL 186

Query: 186 CVAPGFVPT 194
            + P  + T
Sbjct: 187 GILPVTLDT 195

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score =  156 bits (397), Expect = 2e-47
 Identities = 46/202 (22%), Positives = 86/202 (42%), Gaps = 8/202 (3%)

Query: 1   MEKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK-LKAR 59
           +    M  +    VAIVT   +GIG GIA  L   G  + ++          V+  L   
Sbjct: 18  LYFQSMMTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGL 77

Query: 60  GIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAA-ANPSVDSILQTKESVLDKLW 118
           G  VI +   +++    +  ++  + +FG+ID +V+NA  A+   D  L  K    D + 
Sbjct: 78  GARVIFLRADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIV 137

Query: 119 DINVKSSILLLQDAAPHL-----QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKA 173
            +N++ ++   Q     +     +   S++ I+S++          Y ++K  L   ++ 
Sbjct: 138 GVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPERLDYCMSKAGLAAFSQG 197

Query: 174 LAAEMAP-DTRVNCVAPGFVPT 194
           LA  +A     V  V PG + +
Sbjct: 198 LALRLAETGIAVFEVRPGIIRS 219

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score =  155 bits (394), Expect = 3e-47
 Identities = 46/214 (21%), Positives = 88/214 (41%), Gaps = 16/214 (7%)

Query: 7   AKRFQGKVAIVTASTQGIGFGIAERL---GLEGASVVVSSRKQKNVDEAVVKLKAR--GI 61
           A      V ++T +++G G  +A +L      G+ ++VS+R +  + +   +L A+   +
Sbjct: 1   ADGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDL 60

Query: 62  EVIGVVCHVSNGQQRKNLINQTIEKFG----KIDVVVSNAAA--NPSVDSILQTKESVLD 115
           +V+     +      + L++   E       +  ++++NAA   + S   +     + ++
Sbjct: 61  KVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVN 120

Query: 116 KLWDINVKSSILLLQDAAPHLQK----GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLT 171
             W +N+ S + L        Q       +VV ISS+   QP     +Y   K A   L 
Sbjct: 121 NYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLY 180

Query: 172 KALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDG 205
           + LAAE  P  RV   APG +     +       
Sbjct: 181 QVLAAE-EPSVRVLSYAPGPLDNDMQQLARETSK 213

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score =  155 bits (395), Expect = 3e-47
 Identities = 51/195 (26%), Positives = 85/195 (43%), Gaps = 15/195 (7%)

Query: 3   KMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIE 62
             +  + F+GKVA+VT +  GIG  +   L   GA V V+ R             A    
Sbjct: 19  YFQSMQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAV-----------AGIAA 67

Query: 63  VIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINV 122
            + +   +        L        G++D+VV+NA        I +T ++       +NV
Sbjct: 68  DLHLPGDLREAAYADGLPGAVAAGLGRLDIVVNNAGVISR-GRITETTDADWSLSLGVNV 126

Query: 123 KSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP 180
           ++   + + A P +    G ++V ++S  G +P    A+Y +TK AL  LT+ +  + AP
Sbjct: 127 EAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYCLTKAALASLTQCMGMDHAP 186

Query: 181 DT-RVNCVAPGFVPT 194
              R+N V P  V T
Sbjct: 187 QGIRINAVCPNEVNT 201

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score =  154 bits (392), Expect = 4e-47
 Identities = 37/195 (18%), Positives = 83/195 (42%), Gaps = 6/195 (3%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
               IVT +  G+G  +   L   G  V +  R+ + + +  + L   G  VIG+V  ++
Sbjct: 3   LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL---GNAVIGIVADLA 59

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQD 131
           + +         +E  G  ++V+  A        +       + ++ + N+ S+IL+ Q 
Sbjct: 60  HHEDVDVAFAAAVEWGGLPELVLHCAGTGE-FGPVGVYTAEQIRRVMESNLVSTILVAQQ 118

Query: 132 AAPHL-QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RVNCVAP 189
               + ++G  +  + S A    +++ ++Y  +K  + G  ++L AE+     R+  + P
Sbjct: 119 TVRLIGERGGVLANVLSSAAQVGKANESLYCASKWGMRGFLESLRAELKDSPLRLVNLYP 178

Query: 190 GFVPTHFAEYITSND 204
             + + F +     D
Sbjct: 179 SGIRSEFWDNTDHVD 193

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score =  158 bits (400), Expect = 4e-47
 Identities = 46/200 (23%), Positives = 92/200 (46%), Gaps = 12/200 (6%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN-------VDEAVVKL 56
           +    R  G    +T +++GIG  IA +   +GA++V++++  +        +  A  ++
Sbjct: 37  LPNTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEI 96

Query: 57  KARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDK 116
           +A G + +  +  V + QQ    + + I+KFG ID++V+NA+A   + + L T    LD 
Sbjct: 97  EAVGGKALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAIS-LTNTLDTPTKRLDL 155

Query: 117 LWDINVKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQ--SSMAMYGVTKTALLGLTK 172
           + ++N + + L  +   P+L   K + ++ IS      P        Y + K  +     
Sbjct: 156 MMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVL 215

Query: 173 ALAAEMAPDTRVNCVAPGFV 192
            +A E   +  VN + P   
Sbjct: 216 GMAEEFKGEIAVNALWPKTA 235

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score =  154 bits (392), Expect = 6e-47
 Identities = 51/194 (26%), Positives = 91/194 (46%), Gaps = 8/194 (4%)

Query: 7   AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGV 66
           + R  GKVAI+T  T GIG  IA +   EGA V+++ R     ++A   +     ++   
Sbjct: 1   SNRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPD-QIQFF 59

Query: 67  VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSI 126
               S+      L + T + FG +  +V+NA    +   + +T  +   KL  +N+    
Sbjct: 60  QHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKS-VEETTTAEWRKLLAVNLDGVF 118

Query: 127 LLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT- 182
              +     ++    G+S++ +SSI G+    S+  Y  +K A+  ++K+ A + A    
Sbjct: 119 FGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDY 178

Query: 183 --RVNCVAPGFVPT 194
             RVN V PG++ T
Sbjct: 179 DVRVNTVHPGYIKT 192

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score =  154 bits (391), Expect = 1e-46
 Identities = 65/200 (32%), Positives = 104/200 (52%), Gaps = 8/200 (4%)

Query: 2   EKMKMAKRF--QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKL-KA 58
               M + F  +G+VA+VT  ++G+GFGIA+ L   G SVVV+SR  +   EA  KL + 
Sbjct: 9   HHHHMKEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEK 68

Query: 59  RGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLW 118
            G+E +   C VSN ++ K L+    EKFGK+D VV+ A  N       +       ++ 
Sbjct: 69  YGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHP-AEEFPLDEFRQVI 127

Query: 119 DINVKSSILLLQDAAPHL--QKGSSVVLISSIAGYQ-PQSSMAMYGVTKTALLGLTKALA 175
           ++N+  +  + ++A   L      S++ I S+   +    +++ Y  +K  +  LTKALA
Sbjct: 128 EVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALA 187

Query: 176 AEMAPD-TRVNCVAPGFVPT 194
            E      RVN +APG+  T
Sbjct: 188 KEWGRYGIRVNVIAPGWYRT 207

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score =  154 bits (391), Expect = 2e-46
 Identities = 53/212 (25%), Positives = 92/212 (43%), Gaps = 20/212 (9%)

Query: 3   KMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVV----------------SSRKQ 46
              M  R +GKVA VT + +G G   A RL  EGA ++                  +   
Sbjct: 2   PGSMTGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTP 61

Query: 47  KNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSI 106
           +++ E    +K     ++     V +    K  ++  +E+ G++D++V+NA      D++
Sbjct: 62  EDLAETADLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTL 121

Query: 107 LQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVT 163
            +T E    ++ DIN+      ++   PH+     G S++L SS+ G +       Y   
Sbjct: 122 DKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAA 181

Query: 164 KTALLGLTKALAAEMAPDT-RVNCVAPGFVPT 194
           K  ++GL +A   E+     RVN V P  V T
Sbjct: 182 KHGVVGLMRAFGVELGQHMIRVNSVHPTHVKT 213

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score =  153 bits (390), Expect = 2e-46
 Identities = 58/189 (30%), Positives = 94/189 (49%), Gaps = 13/189 (6%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
           + F  KVAIVT  + GIG  + + L   GA VV  S  +K+        K          
Sbjct: 10  EEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHFK---------- 59

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
             V+N ++ K  + +T +K+G+ID++V+NA        +  T   +  ++ D+NV  S L
Sbjct: 60  IDVTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQ-YSPLHLTPTEIWRRIIDVNVNGSYL 118

Query: 128 LLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVN 185
           + +   P +      S++ I+S+  Y    + A Y  +K ALLGLT+++A + AP  R N
Sbjct: 119 MAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYAPKIRCN 178

Query: 186 CVAPGFVPT 194
            V PG + T
Sbjct: 179 AVCPGTIMT 187

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score =  153 bits (390), Expect = 2e-46
 Identities = 47/196 (23%), Positives = 85/196 (43%), Gaps = 13/196 (6%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK-------NVDEAVVKLKARGI 61
              GK   +T +++GIG  IA R   +GA+V ++++           +  A   + A G 
Sbjct: 3   TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGG 62

Query: 62  EVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDIN 121
           + + + C +    Q +  +  T++ FG ID++V+NA+A   +   L T     D +  +N
Sbjct: 63  QGLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAI-WLRGTLDTPMKRFDLMQQVN 121

Query: 122 VKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSM--AMYGVTKTALLGLTKALAAE 177
            + S +  Q   PHL       ++ ++      P        Y + K  +  +T  LAAE
Sbjct: 122 ARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGYTLAKMGMSLVTLGLAAE 181

Query: 178 MAPDT-RVNCVAPGFV 192
             P    +N + P  V
Sbjct: 182 FGPQGVAINALWPRTV 197

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score =  153 bits (389), Expect = 2e-46
 Identities = 53/192 (27%), Positives = 85/192 (44%), Gaps = 7/192 (3%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
           M+ R  GKVA+V+   +G+G      +  EGA VV      +       +L         
Sbjct: 1   MSGRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL---ADAARY 57

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSS 125
           V   V+   Q K  ++  +  FG + V+V+NA     + +I     +   ++ D+N+   
Sbjct: 58  VHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILN-IGTIEDYALTEWQRILDVNLTGV 116

Query: 126 ILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT- 182
            L ++     +      S++ ISSI G     +   Y  TK A+ GLTK+ A E+ P   
Sbjct: 117 FLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGI 176

Query: 183 RVNCVAPGFVPT 194
           RVN + PG V T
Sbjct: 177 RVNSIHPGLVKT 188

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score =  153 bits (390), Expect = 3e-46
 Identities = 41/197 (20%), Positives = 89/197 (45%), Gaps = 12/197 (6%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN-------VDEAVVKLKARGI 61
             +GK   ++  ++GIG  IA+R+  +GA+V + ++  +        +  A  +++  G 
Sbjct: 6   SLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGG 65

Query: 62  EVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDIN 121
           + + +V  + +G      + +T+E+FG ID+ V+NA+A  ++ SI +      D +  I 
Sbjct: 66  QALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAI-NLGSIEEVPLKRFDLMNGIQ 124

Query: 122 VKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSS-MAMYGVTKTALLGLTKALAAEM 178
           V+ +  + Q   PH+  +    ++ +S     +P+      Y + K  +      +A E+
Sbjct: 125 VRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRPTPYMMAKYGMTLCALGIAEEL 184

Query: 179 APDT-RVNCVAPGFVPT 194
                  N + P     
Sbjct: 185 RDAGIASNTLWPRTTVA 201

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score =  154 bits (391), Expect = 3e-46
 Identities = 53/208 (25%), Positives = 96/208 (46%), Gaps = 16/208 (7%)

Query: 3   KMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVV------------SSRKQKNVD 50
              MA + +GKVA +T + +G G   A  L  EGA ++                   ++ 
Sbjct: 19  PGSMAGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLA 78

Query: 51  EAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTK 110
           E V +++A G  +I     V +    +  ++  + + G++D+V++NAA       + +  
Sbjct: 79  ETVRQVEALGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMD 138

Query: 111 ESVLDKLWDINVKSSILLLQDAAPHL---QKGSSVVLISSIAGYQPQSSMAMYGVTKTAL 167
                 + D+N+  + +  + A PH+   ++G S+V  SSI G +   ++  Y  +K  L
Sbjct: 139 PKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGL 198

Query: 168 LGLTKALAAEMAPDT-RVNCVAPGFVPT 194
            GL + +A E+ P   RVN V P  V T
Sbjct: 199 HGLMRTMALELGPRNIRVNIVCPSSVAT 226

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score =  152 bits (387), Expect = 3e-46
 Identities = 43/188 (22%), Positives = 81/188 (43%), Gaps = 13/188 (6%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKL-KARGIEVIGVVCHVS 71
            +A+VT +    G    E L  +G +VV       +  E      +  G   +       
Sbjct: 2   VIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGTIALAE----- 56

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDS--ILQTKESVLDKLWDINVKSSILLL 129
             Q+ + L++ T++    ID +VSN      ++   +  T E+ + ++++      ILLL
Sbjct: 57  --QKPERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLL 114

Query: 130 QDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RVNC 186
           Q A   L    G+SV+ I+S  G +P +   +YG  + A + L ++ A  ++ D   +  
Sbjct: 115 QSAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPARAATVALVESAAKTLSRDGILLYA 174

Query: 187 VAPGFVPT 194
           + P F   
Sbjct: 175 IGPNFFNN 182

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score =  154 bits (391), Expect = 4e-46
 Identities = 55/195 (28%), Positives = 90/195 (46%), Gaps = 12/195 (6%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-----GIEV 63
             QG+VAIVT    GIG  I + L   G++VV++SRK + +  A  +L+A         V
Sbjct: 15  LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARV 74

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDS-ILQTKESVLDKLWDINV 122
           I + C++ N ++  NL+  T++ FGKI+ +V+N        S            + + N+
Sbjct: 75  IPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQ--FLSPAEHISSKGWHAVLETNL 132

Query: 123 KSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP 180
             +  + +        + G S+V I               G  +  +  LTK+LA E A 
Sbjct: 133 TGTFYMCKAVYSSWMKEHGGSIVNIIV-PTKAGFPLAVHSGAARAGVYNLTKSLALEWAC 191

Query: 181 D-TRVNCVAPGFVPT 194
              R+NCVAPG + +
Sbjct: 192 SGIRINCVAPGVIYS 206

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score =  153 bits (388), Expect = 4e-46
 Identities = 48/199 (24%), Positives = 87/199 (43%), Gaps = 11/199 (5%)

Query: 1   MEKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG 60
            + M    +   K+AIVT +  G+G  +A  L   G  V ++ R+   + E   ++   G
Sbjct: 20  FQSMS---KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI---G 73

Query: 61  IEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDI 120
            + + V   V++    + L   T+EKFG++DV+ +NA        +     +   ++ D 
Sbjct: 74  DDALCVPTDVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDT 133

Query: 121 NVKSSILLLQDAAPHLQK----GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAA 176
           N+    L  Q+A   ++     G  ++   SI+   P+   A Y  TK A+ GLTK+ + 
Sbjct: 134 NLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAITGLTKSTSL 193

Query: 177 EMAP-DTRVNCVAPGFVPT 194
           +    D     +  G   T
Sbjct: 194 DGRVHDIACGQIDIGNADT 212

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score =  154 bits (390), Expect = 5e-46
 Identities = 54/206 (26%), Positives = 99/206 (48%), Gaps = 13/206 (6%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GI 61
           M + K F G+ A VT    G+G G+  +L  +G  V ++  +Q ++D+A+  L+A   G 
Sbjct: 1   MSL-KDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGP 59

Query: 62  EVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDIN 121
           EV+GV   V++ +  K   ++   +FG + ++ +NA  N     I ++     D L  +N
Sbjct: 60  EVMGVQLDVASREGFKMAADEVEARFGPVSILCNNAGVNLF-QPIEESSYDDWDWLLGVN 118

Query: 122 VKSSILLLQDAAPHL--------QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKA 173
           +   +  +    P +        QKG  VV  +S+A +    S  +Y  TK A+ GL+++
Sbjct: 119 LHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAVRGLSES 178

Query: 174 LAAEMAPDT-RVNCVAPGFVPTHFAE 198
           L   +      V+ + PG V ++   
Sbjct: 179 LHYSLLKYEIGVSVLCPGLVKSYIYA 204

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score =  152 bits (386), Expect = 6e-46
 Identities = 48/198 (24%), Positives = 85/198 (42%), Gaps = 11/198 (5%)

Query: 4   MKMAKRF--QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI 61
           M     F   G  A VT +  GIG  I       GA +++  R+   +D A  +L     
Sbjct: 1   MDYRTVFRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL--GAA 58

Query: 62  EVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDIN 121
               +V  V++ +          E    + ++V++A      D+ L+T ++   ++  +N
Sbjct: 59  VAARIVADVTDAEAMTAAA-AEAEAVAPVSILVNSAGIARLHDA-LETDDATWRQVMAVN 116

Query: 122 VKSSILLLQDAAPHL--QKGSSVVLISSIAGYQ--PQSSMAMYGVTKTALLGLTKALAAE 177
           V       +     +  +   ++V + S++G         + Y  +K A+  LT+ALAAE
Sbjct: 117 VDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAE 176

Query: 178 MAPD-TRVNCVAPGFVPT 194
            A    RVN +APG+V T
Sbjct: 177 WAGRGVRVNALAPGYVAT 194

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score =  151 bits (385), Expect = 7e-46
 Identities = 56/191 (29%), Positives = 98/191 (51%), Gaps = 14/191 (7%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
            R  GKV I+TA+ QGIG   A     EGA V+ +      ++E+ ++   +   +   V
Sbjct: 2   GRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATD-----INESKLQELEKYPGIQTRV 56

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
             V+  +Q    I+Q   +  ++DV+ + A       ++L  +E   D   ++NV+S  L
Sbjct: 57  LDVTKKKQ----IDQFANEVERLDVLFNVAGFVH-HGTVLDCEEKDWDFSMNLNVRSMYL 111

Query: 128 LLQDAAPHL--QKGSSVVLISSIAGY-QPQSSMAMYGVTKTALLGLTKALAAEMAPDT-R 183
           +++   P +  QK  +++ +SS+A   +   +  +Y  TK A++GLTK++AA+      R
Sbjct: 112 MIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIR 171

Query: 184 VNCVAPGFVPT 194
            NCV PG V T
Sbjct: 172 CNCVCPGTVDT 182

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score =  153 bits (388), Expect = 8e-46
 Identities = 45/192 (23%), Positives = 99/192 (51%), Gaps = 2/192 (1%)

Query: 5   KMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKL-KARGIEV 63
           K +++ +GK  ++T    GIG  ++     EGA++ ++   ++       +  +  G++ 
Sbjct: 40  KGSEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKC 99

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVK 123
           + +   +S+ Q  K+++ +T+ + G ++++V+N A       +       L+K + IN+ 
Sbjct: 100 VLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIF 159

Query: 124 SSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-T 182
           S   + + A  HL++G  ++  +SI  Y+   ++  Y  TK A++  T++L+  +     
Sbjct: 160 SYFHVTKAALSHLKQGDVIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQKGI 219

Query: 183 RVNCVAPGFVPT 194
           RVN VAPG + T
Sbjct: 220 RVNGVAPGPIWT 231

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score =  150 bits (382), Expect = 1e-45
 Identities = 31/192 (16%), Positives = 65/192 (33%), Gaps = 11/192 (5%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
           MA   + +  +V      +G    +        V         +D    +  +  + V  
Sbjct: 1   MAASGEARRVLVYGGRGALGSRCVQAFRARNWWVAS-------IDVVENEEASASVIVKM 53

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSS 125
                    Q    +   +    K+D ++  A      ++  ++     D +W  ++ +S
Sbjct: 54  TDSFTEQADQVTAEV-GKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTS 112

Query: 126 ILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT--- 182
            +    A  HL++G  + L  + A       M  YG+ K A+  L ++LA + +      
Sbjct: 113 TISSHLATKHLKEGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGA 172

Query: 183 RVNCVAPGFVPT 194
               V P  + T
Sbjct: 173 AAIAVLPVTLDT 184

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score =  151 bits (384), Expect = 1e-45
 Identities = 49/191 (25%), Positives = 85/191 (44%), Gaps = 8/191 (4%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
            R QGKVA+VT    G+G  + + L  EGA V  S   +    +   +L   G   + V 
Sbjct: 2   NRLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GERSMFVR 58

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
             VS+      ++     + G ++V+V+NA      D +   +     +L  IN +S  +
Sbjct: 59  HDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGD-METGRLEDFSRLLKINTESVFI 117

Query: 128 LLQDAAPHLQK-GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT---R 183
             Q     +++ G S++ ++S++ + P    A Y  +K A+  LT+A A          R
Sbjct: 118 GCQQGIAAMKETGGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIR 177

Query: 184 VNCVAPGFVPT 194
           VN + P  + T
Sbjct: 178 VNSIHPDGIYT 188

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score =  150 bits (381), Expect = 5e-45
 Identities = 55/209 (26%), Positives = 96/209 (45%), Gaps = 18/209 (8%)

Query: 3   KMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVV-------------SSRKQKNV 49
              MA + +G+VA +T + +G G   A R+  EGA ++                    ++
Sbjct: 2   PGSMAGKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDL 61

Query: 50  DEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQT 109
            E V  ++A    ++  V    +  + + +++  +   G++D++V+NA       +    
Sbjct: 62  SETVRLVEAANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAA-PQAWDDI 120

Query: 110 KESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTA 166
                  + DINV  +   +   AP + +   G S++LISS AG + Q  M  Y  +K A
Sbjct: 121 TPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTASKHA 180

Query: 167 LLGLTKALAAEMAPDT-RVNCVAPGFVPT 194
           + GL +A AAE+   + RVN V PG V T
Sbjct: 181 VTGLARAFAAELGKHSIRVNSVHPGPVNT 209

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score =  150 bits (381), Expect = 5e-45
 Identities = 49/205 (23%), Positives = 95/205 (46%), Gaps = 19/205 (9%)

Query: 1   MEKMKMAKRFQGKVAIVT--ASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK--L 56
           ++++ +    +GKV +VT  +  +G+G   A      GA+V ++   +    E  VK   
Sbjct: 13  LDQLSL----KGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELE 68

Query: 57  KARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDK 116
           K  GI+     C V + +  + L+   +  FG+ID  ++NA A      IL       + 
Sbjct: 69  KTYGIKAKAYKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATADSG-ILDGSVEAWNH 127

Query: 117 LWDINVKSSILLLQDAAPHL--QKGSSVVLISSIAGY-----QPQSSMAMYGVTKTALLG 169
           +  +++  +    +    H   +   S+V+ +S++G+     Q Q+S   Y V K   + 
Sbjct: 128 VVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTS---YNVAKAGCIH 184

Query: 170 LTKALAAEMAPDTRVNCVAPGFVPT 194
           + ++LA E     RVN ++PG++ T
Sbjct: 185 MARSLANEWRDFARVNSISPGYIDT 209

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score =  149 bits (378), Expect = 7e-45
 Identities = 55/214 (25%), Positives = 100/214 (46%), Gaps = 9/214 (4%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK-LKARGIEVIGV 66
              +GKVA+VT +++GIG  IA+RL  +GA V +    +K   E  V  +++ G     +
Sbjct: 3   SMLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSI 62

Query: 67  VCHVSNGQQRKNLINQTIEKF------GKIDVVVSNAAANPSVDSILQTKESVLDKLWDI 120
             ++ +    + L +    +        K D++++NA   P    I +T E   D++  +
Sbjct: 63  GANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGA-FIEETTEQFFDRMVSV 121

Query: 121 NVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP 180
           N K+   ++Q A   L+  S ++ ISS A          Y +TK A+  +T  LA ++  
Sbjct: 122 NAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDFIAYSMTKGAINTMTFTLAKQLGA 181

Query: 181 -DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSL 213
               VN + PGFV T     + S+  +    +++
Sbjct: 182 RGITVNAILPGFVKTDMNAELLSDPMMKQYATTI 215

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score =  150 bits (380), Expect = 7e-45
 Identities = 51/194 (26%), Positives = 91/194 (46%), Gaps = 8/194 (4%)

Query: 6   MAKRF--QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV 63
           M   F   G+ A+VT +  GIG  IA      GA V+   R    V E   ++   G   
Sbjct: 23  MTGPFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDG-VKEVADEIADGGGSA 81

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVK 123
             VV  +++ +   N+  + +    ++DV+V+NA          +       ++  +N+ 
Sbjct: 82  EAVVADLADLEGAANVA-EELAATRRVDVLVNNAGIIARAP-AEEVSLGRWREVLTVNLD 139

Query: 124 SSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD 181
           ++ +L +     +       +V I+S+  +Q   ++A Y  +K A++GLT+ALA+E A  
Sbjct: 140 AAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAVVGLTRALASEWAGR 199

Query: 182 -TRVNCVAPGFVPT 194
              VN +APG+V T
Sbjct: 200 GVGVNALAPGYVVT 213

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score =  149 bits (378), Expect = 8e-45
 Identities = 57/202 (28%), Positives = 100/202 (49%), Gaps = 8/202 (3%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG---IE 62
           M+   Q  +AI+T ++QGIG  IA  L  +G  VV+ +R ++N+++   ++        E
Sbjct: 1   MSLEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQE 60

Query: 63  VIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINV 122
            I +   +++  +    I    +K+G +D++V+ AA     D  L        K+ +INV
Sbjct: 61  PIVLPLDITDCTKADTEIKDIHQKYGAVDILVNAAAMFM--DGSLSEPVDNFRKIMEINV 118

Query: 123 KSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP 180
            +   +L+     +  QK   +  ++S A     +   +YG TK ALLGL ++L  E+AP
Sbjct: 119 IAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRELAP 178

Query: 181 DT-RVNCVAPGFVPTHFAEYIT 201
              RV  + PG+V T  A+   
Sbjct: 179 LGIRVTTLCPGWVNTDMAKKAG 200

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score =  148 bits (377), Expect = 1e-44
 Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 26/203 (12%)

Query: 1   MEKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG 60
            + M    R Q KV ++T ++QGIG G+          VV +SR  K          +  
Sbjct: 20  FQSMM---RNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIK---------PSAD 67

Query: 61  IEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNA---AANPSVDSILQTKESVLDKL 117
            ++  V   +S  +    ++ + IE+FG+ID +V+NA    A P     ++  +   D  
Sbjct: 68  PDIHTVAGDISKPETADRIVREGIERFGRIDSLVNNAGVFLAKP----FVEMTQEDYDHN 123

Query: 118 WDINVKSSILLLQDAAPHL--QKGSSVVLISSIAGYQP---QSSMAMYGVTKTALLGLTK 172
             +NV     + Q AA  +  Q    +V I++    QP     S     +TK  L  +T+
Sbjct: 124 LGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSAL-ASLTKGGLNAVTR 182

Query: 173 ALAAEMAPDT-RVNCVAPGFVPT 194
           +LA E +    RVN V+PG + T
Sbjct: 183 SLAMEFSRSGVRVNAVSPGVIKT 205

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score =  149 bits (378), Expect = 2e-44
 Identities = 51/217 (23%), Positives = 94/217 (43%), Gaps = 8/217 (3%)

Query: 1   MEKMKMAKRFQGKVAIVT-ASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR 59
           + +    +  QGK  IVT AS  GIG  +A  L   GA VVV++R ++ + + V      
Sbjct: 17  LNEEFRPEMLQGKKVIVTGASK-GIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLEL 75

Query: 60  G-IEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLW 118
           G      +   + +    +  + Q  +  G +D+++ N   N S  ++       + K  
Sbjct: 76  GAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTS-LNLFHDDIHHVRKSM 134

Query: 119 DINVKSSILLLQDAAPHLQKGS-SVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAE 177
           ++N  S ++L   A P L++ + S+V++SS+AG      +A Y  +K AL G   ++  E
Sbjct: 135 EVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKE 194

Query: 178 MAPDT---RVNCVAPGFVPTHFAEYITSNDGVVSSVS 211
            +       +     G + T  A    S    + +  
Sbjct: 195 YSVSRVNVSITLCVLGLIDTETAMKAVSGIVHMQAAP 231

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score =  148 bits (375), Expect = 2e-44
 Identities = 49/189 (25%), Positives = 82/189 (43%), Gaps = 7/189 (3%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
              GK  I+T   +G+G   A +    GA VV++    +       +L   G        
Sbjct: 2   DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDAARYQHL 58

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
            V+  +  + ++    E+FG +D +V+NA  +     +         K+ +IN+    + 
Sbjct: 59  DVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTG-MFLETESVERFRKVVEINLTGVFIG 117

Query: 129 LQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RVN 185
           ++   P +    G S+V ISS AG    +  + YG +K  + GL+K  A E+  D  RVN
Sbjct: 118 MKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVN 177

Query: 186 CVAPGFVPT 194
            V PG   T
Sbjct: 178 SVHPGMTYT 186

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score =  148 bits (376), Expect = 3e-44
 Identities = 52/215 (24%), Positives = 90/215 (41%), Gaps = 24/215 (11%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK--LKARGI 61
               +  +   A++T   + IG  IA RL  +G  VVV  R  +   + +V     AR  
Sbjct: 3   ETSHEASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAG 62

Query: 62  EVIGVVCHVSN----GQQRKNLINQTIEKFGKIDVVVSNA----------AANPSVDSIL 107
             +     +S         +++I+ +   FG+ DV+V+NA            + +  +  
Sbjct: 63  SAVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADA 122

Query: 108 QTKESVLDKLWDINVKSSILLLQDAAPHL-------QKGSSVVLISSIAGYQPQSSMAMY 160
           +  ++ + +L+  N  + + L++  A           +  SVV +       P     +Y
Sbjct: 123 KPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVY 182

Query: 161 GVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPT 194
            + K AL GLT+A A E+AP   RVN VAPG    
Sbjct: 183 TMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLL 217

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score =  147 bits (374), Expect = 4e-44
 Identities = 68/198 (34%), Positives = 94/198 (47%), Gaps = 18/198 (9%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKL-KARGIEVIGV 66
              QG+  +VT  T+GIG GIA      GA+V V+ R   ++D  V  L +    +VIGV
Sbjct: 6   FDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGV 65

Query: 67  VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQT-KESVLDKLWDINVKSS 125
              VS+  Q   L  + +E+FG IDVV +NA   P  D+ L T     L+ ++ +NV  +
Sbjct: 66  QTDVSDRAQCDALAGRAVEEFGGIDVVCANAGVFP--DAPLATMTPEQLNGIFAVNVNGT 123

Query: 126 ILLLQDAAPHL--QKGSSVVLISSIAGY------QPQSSMAMYGVTKTALLGLTKALAAE 177
              +Q     L       VVL SSI G             + YG TK A LG  +  A E
Sbjct: 124 FYAVQACLDALIASGSGRVVLTSSITGPITGYPGW-----SHYGATKAAQLGFMRTAAIE 178

Query: 178 MAPD-TRVNCVAPGFVPT 194
           +AP    VN + PG + T
Sbjct: 179 LAPHKITVNAIMPGNIMT 196

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score =  148 bits (375), Expect = 4e-44
 Identities = 48/194 (24%), Positives = 87/194 (44%), Gaps = 6/194 (3%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKL--KARGIEV 63
             +    K A++T ST GIG  IA  L   GA++V++     +    V           V
Sbjct: 19  YFQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTV 78

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVK 123
           +     ++   +  +++    ++FG  D++V+NA     V+ I        D++  +N+ 
Sbjct: 79  LHHPADMTKPSEIADMMAMVADRFGGADILVNNAGVQF-VEKIEDFPVEQWDRIIAVNLS 137

Query: 124 SSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD 181
           SS   ++ A P +  +    ++ I+S  G       + Y   K  ++GLTK +A E+A  
Sbjct: 138 SSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIMGLTKTVALEVAES 197

Query: 182 -TRVNCVAPGFVPT 194
              VN + PG+V T
Sbjct: 198 GVTVNSICPGYVLT 211

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score =  147 bits (374), Expect = 5e-44
 Identities = 49/201 (24%), Positives = 88/201 (43%), Gaps = 8/201 (3%)

Query: 2   EKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK-LKARG 60
           E +         V +VT  ++GIG  +      +G  V V+    +   +AVV  +   G
Sbjct: 16  ENLYFQSMSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESG 75

Query: 61  IEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDI 120
            E + +   V N      + +    +FG++D +V+NA        + +     ++++  +
Sbjct: 76  GEAVAIPGDVGNAADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRV 135

Query: 121 NVKSSILLLQDAAPHLQK-----GSSVVLISSIAGYQPQS-SMAMYGVTKTALLGLTKAL 174
           NV  SIL   +A   + +     G ++V +SS+A     +     Y  +K A+   T  L
Sbjct: 136 NVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYAASKAAIDTFTIGL 195

Query: 175 AAEMAPDT-RVNCVAPGFVPT 194
           A E+A +  RVN V PG + T
Sbjct: 196 AREVAAEGIRVNAVRPGIIET 216

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score =  147 bits (373), Expect = 5e-44
 Identities = 38/185 (20%), Positives = 63/185 (34%), Gaps = 9/185 (4%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
             AIVT      G G A RL   G +V       K  DE                    +
Sbjct: 2   STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDEL------EAFAETYPQLKPMS 55

Query: 73  GQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDA 132
            Q+   LI      +G++DV+VSN    P    I +          +        L+   
Sbjct: 56  EQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAV 115

Query: 133 APHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RVNCVAP 189
           A  +  +K   ++ I+S   + P   ++ Y   +     L  AL+ E+      V  + P
Sbjct: 116 ASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGP 175

Query: 190 GFVPT 194
            ++ +
Sbjct: 176 NYLHS 180

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score =  147 bits (373), Expect = 6e-44
 Identities = 57/195 (29%), Positives = 91/195 (46%), Gaps = 20/195 (10%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
            R  GK  +VT +  GIG    +    EGAS+V   R+++ + EAV    A   E I VV
Sbjct: 2   GRLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAV---AALEAEAIAVV 58

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNA---AANPSVDSILQTKESVLDKLWDINVKS 124
             VS+ +  + +  + +E+FG++  V   A    +               +K+  +N+  
Sbjct: 59  ADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSAL----SWNLPLEAWEKVLRVNLTG 114

Query: 125 SILLLQDAAPHLQKGSSVVLISSIAGY----QPQSSMAMYGVTKTALLGLTKALAAEMAP 180
           S L+ + A   L++G S+VL  S+AG           A Y   K  ++GL + LA E+A 
Sbjct: 115 SFLVARKAGEVLEEGGSLVLTGSVAGLGAFGL-----AHYAAGKLGVVGLARTLALELAR 169

Query: 181 DT-RVNCVAPGFVPT 194
              RVN + PG + T
Sbjct: 170 KGVRVNVLLPGLIQT 184

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score =  147 bits (373), Expect = 6e-44
 Identities = 55/198 (27%), Positives = 80/198 (40%), Gaps = 13/198 (6%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKL-KARGIEVIGVV 67
            F  K  IVT   +GIG      +   GA+V V  R   +  E   K+ K  G++     
Sbjct: 11  SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQ 70

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
           C VSN       I Q     G I  +++NA     V    +        ++D+NV     
Sbjct: 71  CDVSNTDIVTKTIQQIDADLGPISGLIANAGV-SVVKPATELTHEDFAFVYDVNVFGVFN 129

Query: 128 LLQDAAPHL---QKGSSVVLISSIAGY---QPQSSM----AMYGVTKTALLGLTKALAAE 177
             +  A      Q+  S+V+ SS++     Q   +       Y  +K A   L K LAAE
Sbjct: 130 TCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAE 189

Query: 178 MAP-DTRVNCVAPGFVPT 194
            A    RVN ++PG+V T
Sbjct: 190 WASAGIRVNALSPGYVNT 207

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score =  144 bits (366), Expect = 5e-43
 Identities = 37/213 (17%), Positives = 71/213 (33%), Gaps = 17/213 (7%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDE-AVVKLKARGIEVIGVV 67
               K  I  A+  GIG   +  L        V   + +N    A +K     + +    
Sbjct: 2   DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHT 61

Query: 68  CHVS-NGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSI 126
             V+    + K L+ +  ++   +D++++ A        I    +  +++   IN    +
Sbjct: 62  YDVTVPVAESKKLLKKIFDQLKTVDILINGAG-------I--LDDHQIERTIAINFTGLV 112

Query: 127 LLLQDAAPHLQK-----GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD 181
                      K     G  +  I S+ G+     + +Y  +K A++  T +LA      
Sbjct: 113 NTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPIT 172

Query: 182 -TRVNCVAPGFVPTHFAEYITSNDGVVSSVSSL 213
                 + PG   T       S   V   V+ L
Sbjct: 173 GVTAYSINPGITRTPLVHTFNSWLDVEPRVAEL 205

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score =  144 bits (366), Expect = 1e-42
 Identities = 53/215 (24%), Positives = 87/215 (40%), Gaps = 24/215 (11%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK--LKARGI 61
           +      +   A+VT + + IG  IA +L   G  VV+          ++     K R  
Sbjct: 15  VPRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSN 74

Query: 62  EVIGVVCHVSNGQQR----KNLINQTIEKFGKIDVVVSNA---------AANPSVDSILQ 108
             +     ++N        + +IN     FG+ DV+V+NA           +   +S  +
Sbjct: 75  TAVVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGK 134

Query: 109 TKESVLDKLWDINVKSSILLLQDAAPHL--------QKGSSVVLISSIAGYQPQSSMAMY 160
           T E+ + +L   N  +  LL    A               S+V +      QP  + ++Y
Sbjct: 135 TVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLY 194

Query: 161 GVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPT 194
            + K AL+GLT++ A E+AP   RVN VAPG    
Sbjct: 195 NMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLL 229

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score =  144 bits (365), Expect = 2e-42
 Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 27/211 (12%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVV------------SSRKQKNVDEAVVK 55
            R Q KV +VT   +G G   A +L  EGA +++                 ++++EA ++
Sbjct: 6   GRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLE 65

Query: 56  LKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLD 115
           ++  G +       V +       +   + +FGK+DVVV+NA   P    +         
Sbjct: 66  VEKTGRKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLGAHL---PVQAFA 122

Query: 116 KLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG-----------YQPQSSMAMYGVTK 164
             +D++    I  +  A P+L  G+S++   S+AG                  A Y   K
Sbjct: 123 DAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSYAK 182

Query: 165 TALLGLTKALAAEMAPDT-RVNCVAPGFVPT 194
             +   T  LAA++AP + R N + P  V T
Sbjct: 183 QLVDSYTLQLAAQLAPQSIRANVIHPTNVNT 213

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score =  143 bits (364), Expect = 3e-42
 Identities = 60/201 (29%), Positives = 92/201 (45%), Gaps = 18/201 (8%)

Query: 5   KMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKL-KARGIEV 63
           K+      +  +VT  T+GIG GIA      GA+V V++R  + +     +L +     V
Sbjct: 34  KVMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNV 93

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQT-KESVLDKLWDINV 122
           IGV   VS+     +     ++ FG +DVV +NA   P  ++ L T     L ++ D+NV
Sbjct: 94  IGVRLDVSDPGSCADAARTVVDAFGALDVVCANAGIFP--EARLDTMTPEQLSEVLDVNV 151

Query: 123 KSSILLLQDAAPHL--QKGSSVVLISSIAGY------QPQSSMAMYGVTKTALLGLTKAL 174
           K ++  +Q     L       V+L SSI G             + YG +K A LG  +  
Sbjct: 152 KGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGW-----SHYGASKAAQLGFMRTA 206

Query: 175 AAEMAPD-TRVNCVAPGFVPT 194
           A E+AP    VN + PG + T
Sbjct: 207 AIELAPRGVTVNAILPGNILT 227

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score =  141 bits (359), Expect = 4e-42
 Identities = 41/199 (20%), Positives = 82/199 (41%), Gaps = 11/199 (5%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGA-------SVVVSSRKQKNVDEAVVKLKARGIEVIG 65
            + ++T + +GIG  IA                +V+SSR   ++++  ++ +A G     
Sbjct: 3   HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDT 62

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSS 125
           +   +S+    + L    +E++G ID +V+NA       ++    E   D   + N+K +
Sbjct: 63  ITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRF-GALSDLTEEDFDYTMNTNLKGT 121

Query: 126 ILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT- 182
             L Q     +  Q    +  I+S+A  +     ++Y ++K    GL + +         
Sbjct: 122 FFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNV 181

Query: 183 RVNCVAPGFVPTHFAEYIT 201
           R+  V PG V T     + 
Sbjct: 182 RITDVQPGAVYTPMWGKVD 200

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score =  142 bits (360), Expect = 4e-42
 Identities = 52/188 (27%), Positives = 92/188 (48%), Gaps = 6/188 (3%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
            +GK A+VT ST GIG GIA+ L   GA++V++     +   A+ ++   G++ +     
Sbjct: 2   LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGF--GDPAPALAEIARHGVKAVHHPAD 59

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLL 129
           +S+  Q + L      +FG +D++V+NA     V  + Q      DK+  +N+ +     
Sbjct: 60  LSDVAQIEALFALAEREFGGVDILVNNAGIQH-VAPVEQFPLESWDKIIALNLSAVFHGT 118

Query: 130 QDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNC 186
           + A P +  +    ++ I+S+ G    +  A Y   K  ++GLTK +  E A      N 
Sbjct: 119 RLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNVTCNA 178

Query: 187 VAPGFVPT 194
           + PG+V T
Sbjct: 179 ICPGWVLT 186

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score =  142 bits (361), Expect = 5e-42
 Identities = 54/211 (25%), Positives = 94/211 (44%), Gaps = 18/211 (8%)

Query: 1   MEKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVV-------------SSRKQK 47
                 A   QG+VA +T + +G G   A RL  EGA ++              +    +
Sbjct: 4   SMVAGQAGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPE 63

Query: 48  NVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSIL 107
           ++DE    ++ +G + +  V  V +    + L+   +E+FG++DVVV+NA        + 
Sbjct: 64  DLDETARLVEDQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWG-RVW 122

Query: 108 QTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTK 164
           +  +   D +  +N+  +   L+   P + +   G S+V++SS AG +       Y  +K
Sbjct: 123 ELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASK 182

Query: 165 TALLGLTKALAAEMAPDT-RVNCVAPGFVPT 194
             L  LT  LA E+     RVN + P  V T
Sbjct: 183 HGLTALTNTLAIELGEYGIRVNSIHPYSVET 213

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score =  141 bits (358), Expect = 5e-42
 Identities = 39/189 (20%), Positives = 74/189 (39%), Gaps = 15/189 (7%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHV 70
                IV      +G  I E     G +V+       +  ++ +           V  + 
Sbjct: 2   SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNI----------LVDGNK 51

Query: 71  SNGQQRKNLINQTIE--KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
           +  +Q ++++ QT    +  ++D V   A       +  +      D +   +V SS + 
Sbjct: 52  NWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIA 111

Query: 129 LQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMA---PDTRVN 185
            + A  HL+ G  + L  + A   P  SM  YG+ K A+  LT +LAA+ +    ++ V 
Sbjct: 112 AKLATTHLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVL 171

Query: 186 CVAPGFVPT 194
            + P  + T
Sbjct: 172 TIMPVTLDT 180

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score =  141 bits (357), Expect = 1e-41
 Identities = 54/190 (28%), Positives = 89/190 (46%), Gaps = 6/190 (3%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK--LKARGIEVIGVV 67
            +GKVA+VT ST GIG GIA  L  +GA +V++        E V        G++V+   
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
             +S G+  + L++  + + G+ID++V+NA        I        D +  +N+ +   
Sbjct: 62  ADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQ-HTALIEDFPTEKWDAILALNLSAVFH 120

Query: 128 LLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRV 184
               A PH+  Q    ++ I+S  G    ++ + Y   K  ++G TK  A E A      
Sbjct: 121 GTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITA 180

Query: 185 NCVAPGFVPT 194
           N + PG+V T
Sbjct: 181 NAICPGWVRT 190

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score =  142 bits (361), Expect = 1e-41
 Identities = 50/210 (23%), Positives = 92/210 (43%), Gaps = 17/210 (8%)

Query: 1   MEKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVV------------SSRKQKN 48
             +     R QGKVA +T + +G G   A RL  +GA +V             +    + 
Sbjct: 35  RGQGARMNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEE 94

Query: 49  VDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQ 108
           + E V  ++ +G  +I     V +    + ++++ + +FG ID++VSN   +   + ++ 
Sbjct: 95  LKETVRLVEEQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGE-VVS 153

Query: 109 TKESVLDKLWDINVKSSILLLQDAAPHL---QKGSSVVLISSIAGYQPQSSMAMYGVTKT 165
             +     +   N+  +    +   P +    +G SV+ +SS  G +     + Y  +K 
Sbjct: 154 LTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKH 213

Query: 166 ALLGLTKALAAEMAPDT-RVNCVAPGFVPT 194
            + GL  +LA E+     RVN V PG V T
Sbjct: 214 GVQGLMLSLANEVGRHNIRVNSVNPGAVNT 243

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score =  139 bits (353), Expect = 3e-41
 Identities = 44/192 (22%), Positives = 76/192 (39%), Gaps = 20/192 (10%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
            F GK   VT + +GIG+  A      GA V    +                      V 
Sbjct: 4   DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQ----------AFTQEQYPFATEVM 53

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNA---AANPSVDSILQTKESVLDKLWDINVKSS 125
            V++  Q   +  + + +  ++D +V+ A             Q  +    + + +NV  +
Sbjct: 54  DVADAAQVAQVCQRLLAETERLDALVNAAGILRMGA----TDQLSKEDWQQTFAVNVGGA 109

Query: 126 ILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT- 182
             L Q        Q+G ++V ++S A + P+  M+ YG +K AL  L  ++  E+A    
Sbjct: 110 FNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAGSGV 169

Query: 183 RVNCVAPGFVPT 194
           R N V+PG   T
Sbjct: 170 RCNVVSPGSTDT 181

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score =  139 bits (353), Expect = 7e-41
 Identities = 45/205 (21%), Positives = 88/205 (42%), Gaps = 22/205 (10%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK------------NVDEAVVK 55
             F+GK A++T   +G+G   A  L   GA + +  R +             ++ E V  
Sbjct: 6   ADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVAL 65

Query: 56  LKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNA---AANPSVDSILQTKES 112
           ++  G   I     V +    ++ + +  +  G ID+ ++NA           + + + +
Sbjct: 66  VEKTGRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIAL----LPEVESA 121

Query: 113 VLDKLWDINVKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGL 170
             D++   N+  +   +   AP +  +    +V +SS+ G+    + A Y  +K  ++GL
Sbjct: 122 QWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQASYVSSKWGVIGL 181

Query: 171 TKALAAEMAP-DTRVNCVAPGFVPT 194
           TK  A ++      VN VAPG + T
Sbjct: 182 TKCAAHDLVGYGITVNAVAPGNIET 206

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score =  139 bits (352), Expect = 1e-40
 Identities = 49/209 (23%), Positives = 84/209 (40%), Gaps = 25/209 (11%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVV------------SSRKQKNVDEAV 53
                 GKVA +T + +G G   A RL  +GA ++                  + +   V
Sbjct: 7   SEGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATV 66

Query: 54  VKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESV 113
             ++  G  ++     V + +     +   +++ G++D+VV+NA   P     +   +  
Sbjct: 67  KLVEDIGSRIVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAP-----MSAGDDG 121

Query: 114 LDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAG----YQPQSSMAMYGVTKTA 166
              + D+N+      ++ A P L K   G S+VLISS AG             Y   K  
Sbjct: 122 WHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHG 181

Query: 167 LLGLTKALAAEMAPDT-RVNCVAPGFVPT 194
           ++GL +  A  +A    RVN + P  V T
Sbjct: 182 VVGLMRVYANLLAGQMIRVNSIHPSGVET 210

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score =  138 bits (351), Expect = 1e-40
 Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 22/207 (10%)

Query: 1   MEKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG 60
           + +         +VA+VT +T GIG  IA RLG EG  V V +R ++ +   + +L+  G
Sbjct: 11  VPRGSHMATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG 70

Query: 61  IEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVL----DK 116
           +E  G  C V +  + + L+   +E++G +DV+V+NA          +          D+
Sbjct: 71  VEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAG---------RPGGGATAELADE 121

Query: 117 LWD----INVKSSILLLQDAAPHL----QKGSSVVLISSIAGYQPQSSMAMYGVTKTALL 168
           LW      N+     + +          +    +V I+S  G Q     A Y  +K  ++
Sbjct: 122 LWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVV 181

Query: 169 GLTKALAAEMAP-DTRVNCVAPGFVPT 194
           G TKAL  E+A     VN V PGFV T
Sbjct: 182 GFTKALGLELARTGITVNAVCPGFVET 208

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score =  136 bits (344), Expect = 2e-40
 Identities = 33/194 (17%), Positives = 65/194 (33%), Gaps = 23/194 (11%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
               ++  ++  +G  + ERL  + A V+ + R   +V   +  + +             
Sbjct: 3   AMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSGDVTVDITNIDS------------- 48

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQD 131
                   I +  E+ GK+D +VS   +      + +             +   I L+  
Sbjct: 49  --------IKKMYEQVGKVDAIVSATGSAT-FSPLTELTPEKNAVTISSKLGGQINLVLL 99

Query: 132 AAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGF 191
               L    S  L + I    P    A   +   A+    K+ A EM    R+N V+P  
Sbjct: 100 GIDSLNDKGSFTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAAIEMPRGIRINTVSPNV 159

Query: 192 VPTHFAEYITSNDG 205
           +   + +     +G
Sbjct: 160 LEESWDKLEPFFEG 173

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score =  137 bits (348), Expect = 5e-40
 Identities = 51/194 (26%), Positives = 88/194 (45%), Gaps = 8/194 (4%)

Query: 7   AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGV 66
           +   + + A VT  + GIG  +A  L   G +V   +R  KNV  AV  L+A G +V G 
Sbjct: 19  SHMSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGS 78

Query: 67  VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSIL-QTKESVLDKLWDINVKSS 125
            C V++  +    +   +E+FG I ++V++A    +         +++   + D N+   
Sbjct: 79  SCDVTSTDEVHAAVAAAVERFGPIGILVNSAGR--NGGGETADLDDALWADVLDTNLTGV 136

Query: 126 ILLLQDAAPHL----QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP- 180
             + ++              +V I+S  G Q     A Y  +K  ++G TK++  E+A  
Sbjct: 137 FRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGVVGFTKSVGFELAKT 196

Query: 181 DTRVNCVAPGFVPT 194
              VN V PG+V T
Sbjct: 197 GITVNAVCPGYVET 210

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score =  136 bits (346), Expect = 7e-40
 Identities = 43/201 (21%), Positives = 88/201 (43%), Gaps = 7/201 (3%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
           K   G++ ++T +  GIG   A       + +V+    +  ++E   K K  G +V   V
Sbjct: 27  KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFV 86

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
              SN +   +   +   + G + ++V+NA    +   +  T++  ++K +++NV +   
Sbjct: 87  VDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYT-SDLFATQDPQIEKTFEVNVLAHFW 145

Query: 128 LLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT--- 182
             +   P +       +V ++S AG+     +  Y  +K A +G  K L  E+A      
Sbjct: 146 TTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITG 205

Query: 183 -RVNCVAPGFVPTHFAEYITS 202
            +  C+ P FV T F +  ++
Sbjct: 206 VKTTCLCPNFVNTGFIKNPST 226

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score =  136 bits (344), Expect = 7e-40
 Identities = 52/192 (27%), Positives = 87/192 (45%), Gaps = 10/192 (5%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
           +R  GK A+VT + QGIG  IA RL  +GA+V+VS    +    A     + G +   + 
Sbjct: 2   ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAA---ASIGKKARAIA 58

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDS-ILQTKESVLDKLWDINVKSSI 126
             +S+    K L  +     G ID++V+NA+  P               K+ D+N+  + 
Sbjct: 59  ADISDPGSVKALFAEIQALTGGIDILVNNASIVP--FVAWDDVDLDHWRKIIDVNLTGTF 116

Query: 127 LLLQDAAPHL---QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT- 182
           ++ +     +    K   V+ I+S   +    +MA Y   K  ++G T+ALA E+     
Sbjct: 117 IVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATELGKYNI 176

Query: 183 RVNCVAPGFVPT 194
             N V PG + +
Sbjct: 177 TANAVTPGLIES 188

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score =  135 bits (343), Expect = 1e-39
 Identities = 59/187 (31%), Positives = 91/187 (48%), Gaps = 15/187 (8%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           + A+VT  ++GIG  IAE L   G  V ++SR   N +EA     A+ +  + +   +  
Sbjct: 3   RKALVTGGSRGIGRAIAEALVARGYRVAIASR---NPEEA-----AQSLGAVPLPTDLEK 54

Query: 73  GQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDA 132
               K L+ + +E  G + V+V  AA N      L+       ++  +++  + LL Q A
Sbjct: 55  -DDPKGLVKRALEALGGLHVLVHAAAVNVRKP-ALELSYEEWRRVLYLHLDVAFLLAQAA 112

Query: 133 APHL--QKGSSVVLISSIAGYQPQSSM--AMYGVTKTALLGLTKALAAEMAPD-TRVNCV 187
           APH+       V+ I S+  +     +    Y   KTALLGLT+ALA E A    RVN +
Sbjct: 113 APHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLL 172

Query: 188 APGFVPT 194
            PG+V T
Sbjct: 173 CPGYVET 179

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score =  135 bits (343), Expect = 2e-39
 Identities = 43/196 (21%), Positives = 80/196 (40%), Gaps = 7/196 (3%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK-LKARGIEVI 64
           M+     + A++TA T+G+G  + E+L  +G SV V+        E + +  K     + 
Sbjct: 1   MSLGRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQ 60

Query: 65  GVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSIL-QTKESVLDKLWDINVK 123
            V   V+  +    ++ + +  FGKID +++NA         L   +E   +++   N+ 
Sbjct: 61  FVQADVTKKEDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLT 120

Query: 124 SSILLLQDAAPHL--QKGSSVVLIS--SIAGYQPQSSMAMYGVTKTALLGLTKALAAEMA 179
           +   LL+   P +  Q    ++                + +   K  L+ LTK +A E A
Sbjct: 121 AVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFAAAKVGLVSLTKTVAYEEA 180

Query: 180 P-DTRVNCVAPGFVPT 194
                 N V PG +  
Sbjct: 181 EYGITANMVCPGDIIG 196

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score =  133 bits (338), Expect = 7e-39
 Identities = 46/192 (23%), Positives = 86/192 (44%), Gaps = 19/192 (9%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
           M    + K  +V A+++GIG  +A+ L  EGA V + +R ++ +  +  +          
Sbjct: 13  MELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRY--------- 63

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSS 125
           VVC +         ++   EK  ++D++V NA    +     +       +  D    + 
Sbjct: 64  VVCDLR------KDLDLLFEKVKEVDILVLNAGGPKAGF-FDELTNEDFKEAIDSLFLNM 116

Query: 126 ILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT- 182
           I ++++  P +  +    +V I+S +   P  ++      + AL G  K L+ E+AP   
Sbjct: 117 IKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGI 176

Query: 183 RVNCVAPGFVPT 194
            VNCVAPG+  T
Sbjct: 177 TVNCVAPGWTET 188

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score =  134 bits (340), Expect = 9e-39
 Identities = 57/196 (29%), Positives = 99/196 (50%), Gaps = 6/196 (3%)

Query: 3   KMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIE 62
           K       + KVA+VT + +GIG  IA+ L    + V+  SR QK+ D  V ++K+ G E
Sbjct: 35  KENYYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYE 94

Query: 63  VIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSIL-QTKESVLDKLWDIN 121
             G    VS  ++   +IN+ + +   +D++V+NA      D++  + K    + +   N
Sbjct: 95  SSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGIT--RDNLFLRMKNDEWEDVLRTN 152

Query: 122 VKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMA 179
           + S   + Q  +  +   +   ++ ISSI G       A Y  +K  ++G TK+LA E+A
Sbjct: 153 LNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELA 212

Query: 180 P-DTRVNCVAPGFVPT 194
             +  VN +APGF+ +
Sbjct: 213 SRNITVNAIAPGFISS 228

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score =  134 bits (339), Expect = 9e-39
 Identities = 59/197 (29%), Positives = 98/197 (49%), Gaps = 6/197 (3%)

Query: 2   EKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI 61
               M K    +VAIVT +++GIG  IA  L   GA V+ ++  +   +      K  G+
Sbjct: 18  GPGSMDKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGL 77

Query: 62  EVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSIL-QTKESVLDKLWDI 120
           E  G V +V++      L+  T+++FG ++V+V+NA    + D +  + K+   D + D 
Sbjct: 78  EGRGAVLNVNDATAVDALVESTLKEFGALNVLVNNAGI--TQDQLAMRMKDDEWDAVIDT 135

Query: 121 NVKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEM 178
           N+K+   L +     +   +G  +V I+S+ G         Y   K  + G+T+ALA E+
Sbjct: 136 NLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAGVAGMTRALAREI 195

Query: 179 AP-DTRVNCVAPGFVPT 194
                 VNCVAPGF+ T
Sbjct: 196 GSRGITVNCVAPGFIDT 212

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score =  131 bits (331), Expect = 2e-37
 Identities = 52/228 (22%), Positives = 83/228 (36%), Gaps = 41/228 (17%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK-LKA-RGIEVIG 65
                 VA+VT + + +G  IAE L  EG +V +   +      A+   L A R    I 
Sbjct: 5   TAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAIT 64

Query: 66  VVCHVSN-----------------GQQRKNLINQTIEKFGKIDVVVSNA----------- 97
           V   +SN                   +   L+      +G+ DV+V+NA           
Sbjct: 65  VQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRN 124

Query: 98  --AANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHL--------QKGSSVVLISS 147
               +       +  E+    L+  N  +   L++  A  +            S++ +  
Sbjct: 125 DEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVD 184

Query: 148 IAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPT 194
               QP     +Y + K AL GLT++ A E+AP   RVN V PG    
Sbjct: 185 AMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVL 232

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score =  129 bits (326), Expect = 3e-37
 Identities = 51/207 (24%), Positives = 85/207 (41%), Gaps = 15/207 (7%)

Query: 1   MEKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG 60
           ME MK          ++T +++GIG   A  L  +G  V + +R +    + +  L A  
Sbjct: 1   MEGMK-------GAVLITGASRGIGEATARLLHAKGYRVGLMARDE----KRLQALAAEL 49

Query: 61  IEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDI 120
              + +   V         +    E FG++  +V+NA     +  + +        + D 
Sbjct: 50  EGALPLPGDVREEGDWARAVAAMEEAFGELSALVNNAGVGV-MKPVHELTLEEWRLVLDT 108

Query: 121 NVKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEM 178
           N+  + L ++ A P L  + G ++V + S+AG  P    A Y  +K  LLGL  A   ++
Sbjct: 109 NLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDL 168

Query: 179 APDT-RVNCVAPGFVPTHFAEYITSND 204
                RV  V PG V T FA       
Sbjct: 169 REANVRVVNVLPGSVDTGFAGNTPGQA 195

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score =  131 bits (330), Expect = 6e-37
 Identities = 52/228 (22%), Positives = 83/228 (36%), Gaps = 41/228 (17%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK-LKA-RGIEVIG 65
                 VA+VT + + +G  IAE L  EG +V +   +      A+   L A R    I 
Sbjct: 42  TAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAIT 101

Query: 66  VVCHVSN-----------------GQQRKNLINQTIEKFGKIDVVVSNA----------- 97
           V   +SN                   +   L+      +G+ DV+V+NA           
Sbjct: 102 VQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRN 161

Query: 98  --AANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHL--------QKGSSVVLISS 147
               +       +  E+    L+  N  +   L++  A  +            S++ +  
Sbjct: 162 DEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVD 221

Query: 148 IAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPT 194
               QP     +Y + K AL GLT++ A E+AP   RVN V PG    
Sbjct: 222 AMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVL 269

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score =  128 bits (324), Expect = 8e-37
 Identities = 56/194 (28%), Positives = 100/194 (51%), Gaps = 7/194 (3%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKL-KARGIEVI 64
           M  + QGKV++VT ST+GIG  IAE+L   G++V+++    +       ++    G++  
Sbjct: 1   MEIKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAH 60

Query: 65  GVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSIL-QTKESVLDKLWDINVK 123
           GV  ++ + +       +       ID++V+NA      D +  +      +++  +N+ 
Sbjct: 61  GVEMNLLSEESINKAFEEIYNLVDGIDILVNNAGIT--RDKLFLRMSLLDWEEVLKVNLT 118

Query: 124 SSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP- 180
            + L+ Q++   +  Q+   +V ISS+ G+        Y  TK  L+G TK+LA E+AP 
Sbjct: 119 GTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLAKELAPR 178

Query: 181 DTRVNCVAPGFVPT 194
           +  VN VAPGF+ T
Sbjct: 179 NVLVNAVAPGFIET 192

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score =  128 bits (323), Expect = 1e-36
 Identities = 48/194 (24%), Positives = 83/194 (42%), Gaps = 20/194 (10%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
           R + K  ++T +  GIG    E    EGA +V    ++  + EA     A  +    VV 
Sbjct: 2   RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREA-----AEAVGAHPVVM 56

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQT-KESVLDKLWDINVKSSIL 127
            V++    +    + +   G++D VV  A      D+          + +  +N+  S L
Sbjct: 57  DVADPASVERGFAEALAHLGRLDGVVHYAGIT--RDNFHWKMPLEDWELVLRVNLTGSFL 114

Query: 128 LLQDAAPHL--QKGSSVVLISSIAGY----QPQSSMAMYGVTKTALLGLTKALAAEMAP- 180
           + + A+  +  +   S+VL +S        Q     A Y  +   ++GLT+ LA E+   
Sbjct: 115 VAKAASEAMREKNPGSIVLTASRVYLGNLGQ-----ANYAASMAGVVGLTRTLALELGRW 169

Query: 181 DTRVNCVAPGFVPT 194
             RVN +APGF+ T
Sbjct: 170 GIRVNTLAPGFIET 183

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score =  127 bits (323), Expect = 1e-36
 Identities = 62/191 (32%), Positives = 105/191 (54%), Gaps = 7/191 (3%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK-LKARGIEVIGVV 67
           + +GK AIVT S++G+G  IA +LG  GA++V++        +A  +  KA GI V+   
Sbjct: 2   QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAK 61

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSIL-QTKESVLDKLWDINVKSSI 126
             V N +  +N++   ++ FG+ID++V+NA      D+++ +  E   D + + N+KS+ 
Sbjct: 62  GDVKNPEDVENMVKTAMDAFGRIDILVNNAGIT--RDTLMLKMSEKDWDDVLNTNLKSAY 119

Query: 127 LLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTR 183
           L  +  +  +  QK   ++ I+SIAG    +  A Y  +K  L+G TK++A E A     
Sbjct: 120 LCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKAGLIGFTKSIAKEFAAKGIY 179

Query: 184 VNCVAPGFVPT 194
            N VAPG + T
Sbjct: 180 CNAVAPGIIKT 190

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score =  127 bits (322), Expect = 1e-36
 Identities = 56/198 (28%), Positives = 98/198 (49%), Gaps = 3/198 (1%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
           M    QGKVA++T ++ GIG   A  L  EGA+V +++R+ + +     +L A G +V  
Sbjct: 1   MPSALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHV 60

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSS 125
           +   V++ Q     +  T+E  G +D++V+NA     +  +     +   ++ D N+   
Sbjct: 61  LELDVADRQGVDAAVASTVEALGGLDILVNNAGIML-LGPVEDADTTDWTRMIDTNLLGL 119

Query: 126 ILLLQDAAPHLQKGS-SVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-R 183
           + + + A PHL +   +VV +SSIAG     + A+Y  TK  +   ++ L  E+     R
Sbjct: 120 MYMTRAALPHLLRSKGTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTERGVR 179

Query: 184 VNCVAPGFVPTHFAEYIT 201
           V  + PG   T    +IT
Sbjct: 180 VVVIEPGTTDTELRGHIT 197

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score =  126 bits (320), Expect = 2e-36
 Identities = 46/197 (23%), Positives = 86/197 (43%), Gaps = 6/197 (3%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKL-KARGIEVIGVVCH 69
           + KVA++T +++GIG  IA  L  +G ++ + +R    +++   +L + +G+EV      
Sbjct: 1   EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLD 60

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLL 129
           VS  +  +    + +E+FG +DVVV+NA        + +  E    ++ ++N+      L
Sbjct: 61  VSKAESVEEFSKKVLERFGDVDVVVANAGLGY-FKRLEELSEEEFHEMIEVNLLGVWRTL 119

Query: 130 QDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCV 187
           +     L    G ++V  S ++          Y  TK A   L +    E     R   +
Sbjct: 120 KAFLDSLKRTGGLALVTTSDVSAR-LIPYGGGYVSTKWAARALVRTFQIENPD-VRFFEL 177

Query: 188 APGFVPTHFAEYITSND 204
            PG V T+F        
Sbjct: 178 RPGAVDTYFGGSKPGKP 194

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score =  126 bits (320), Expect = 3e-36
 Identities = 50/189 (26%), Positives = 99/189 (52%), Gaps = 6/189 (3%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
              KVA+VT +++GIGF +A  L  +GA+VV ++  Q + ++    +K +G +  G+V +
Sbjct: 3   LNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLN 62

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSIL-QTKESVLDKLWDINVKSSILL 128
           +S+ +  +N   +   +   ID++V+NA      D+++ +  E     + + N+ S   +
Sbjct: 63  ISDIESIQNFFAEIKAENLAIDILVNNAGIT--RDNLMMRMSEDEWQSVINTNLSSIFRM 120

Query: 129 LQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVN 185
            ++    +  ++   ++ I S+ G         Y   K  ++G +K+LA E+A  +  VN
Sbjct: 121 SKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAYEVASRNITVN 180

Query: 186 CVAPGFVPT 194
            VAPGF+ T
Sbjct: 181 VVAPGFIAT 189

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score =  127 bits (321), Expect = 4e-36
 Identities = 61/196 (31%), Positives = 96/196 (48%), Gaps = 8/196 (4%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK-LKARGIE 62
           M        ++A+VT +++GIG  IA  L   GA V V+        + VV  + A G E
Sbjct: 21  MTALP-LTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGE 79

Query: 63  VIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSIL-QTKESVLDKLWDIN 121
              V   VS   + + L    IE++G++DV+V+NA      D++L + K      + D+N
Sbjct: 80  AFAVKADVSQESEVEALFAAVIERWGRLDVLVNNAGIT--RDTLLLRMKRDDWQSVLDLN 137

Query: 122 VKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMA 179
           +    L  + AA  +  Q+   ++ I+S+ G       A Y   K  ++GLTK +A E+A
Sbjct: 138 LGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTVAKELA 197

Query: 180 P-DTRVNCVAPGFVPT 194
                VN VAPGF+ T
Sbjct: 198 SRGITVNAVAPGFIAT 213

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score =  126 bits (318), Expect = 6e-36
 Identities = 64/190 (33%), Positives = 105/190 (55%), Gaps = 7/190 (3%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK-LKARGIEVIGVVC 68
            +GKVA+VT +++GIG  IA  L  +GA+VVV+    +     VV  +K  G + I V  
Sbjct: 2   LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRA 61

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSIL-QTKESVLDKLWDINVKSSIL 127
            V+N +   N++ QT++ FG++D++V+NA      D++L + KE   D + + N+K   L
Sbjct: 62  DVANAEDVTNMVKQTVDVFGQVDILVNNAGVT--KDNLLMRMKEEEWDTVINTNLKGVFL 119

Query: 128 LLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRV 184
             +  +  +  Q+   +V I+S+ G       A Y   K  ++GLTK  A E+A  +  V
Sbjct: 120 CTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTSAKELASRNITV 179

Query: 185 NCVAPGFVPT 194
           N +APGF+ T
Sbjct: 180 NAIAPGFIAT 189

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score =  124 bits (315), Expect = 1e-35
 Identities = 65/189 (34%), Positives = 108/189 (57%), Gaps = 7/189 (3%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK-LKARGIEVIGVVCH 69
             K A+VT +++GIG  IA +L  EG +V V+    K   EAVV+ +KA+G++   +  +
Sbjct: 3   MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQAN 62

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSIL-QTKESVLDKLWDINVKSSILL 128
           V++  + K +I + + +FG +DV+V+NA      D++L + KE   D + D N+K     
Sbjct: 63  VADADEVKAMIKEVVSQFGSLDVLVNNAGIT--RDNLLMRMKEQEWDDVIDTNLKGVFNC 120

Query: 129 LQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVN 185
           +Q A P +  Q+  +++ +SS+ G       A Y  TK  ++GLTK+ A E+A     VN
Sbjct: 121 IQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVN 180

Query: 186 CVAPGFVPT 194
            VAPGF+ +
Sbjct: 181 AVAPGFIVS 189

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score =  124 bits (315), Expect = 2e-35
 Identities = 54/195 (27%), Positives = 98/195 (50%), Gaps = 9/195 (4%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV 63
           M      +GKVA+VT +++GIG  IAE L   GA V+ ++  +         L   G   
Sbjct: 1   MSQFMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYL---GDNG 57

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSIL-QTKESVLDKLWDINV 122
            G+  +V+N +  + ++    ++FG +D++V+NA    + D++L + KE     + + N+
Sbjct: 58  KGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGI--TRDNLLMRMKEEEWSDIMETNL 115

Query: 123 KSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP 180
            S   L +     +  ++   ++ + S+ G    +  A Y   K  ++G TK++A E+A 
Sbjct: 116 TSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVAS 175

Query: 181 -DTRVNCVAPGFVPT 194
               VN VAPGF+ T
Sbjct: 176 RGVTVNTVAPGFIET 190

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score =  124 bits (313), Expect = 3e-35
 Identities = 45/195 (23%), Positives = 76/195 (38%), Gaps = 10/195 (5%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
             + K+A+VT +T G+G  I + L  +     +         E +  L      V  +  
Sbjct: 2   SLKKKIAVVTGATGGMGIEIVKDLSRDHIVYALGRNP-----EHLAALAEI-EGVEPIES 55

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
            +      +  +   ++    +D +V  AA      +I     +      D+NV     L
Sbjct: 56  DIVKEVLEEGGV-DKLKNLDHVDTLVHAAAVARD-TTIEAGSVAEWHAHLDLNVIVPAEL 113

Query: 129 LQDAAPHLQKGS-SVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RVNC 186
            +   P L+  S  V+ I+S AG  P     +Y  +K AL GL  A   E A +  RV+ 
Sbjct: 114 SRQLLPALRAASGCVIYINSGAGNGPHPGNTIYAASKHALRGLADAFRKEEANNGIRVST 173

Query: 187 VAPGFVPTHFAEYIT 201
           V+PG   T   + + 
Sbjct: 174 VSPGPTNTPMLQGLM 188

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score =  124 bits (313), Expect = 5e-35
 Identities = 60/202 (29%), Positives = 86/202 (42%), Gaps = 15/202 (7%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV-- 63
           M  R +  +A+VT +  GIG  ++ RL  EGA+V      +    E V  L   G +   
Sbjct: 1   MQNRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGP 60

Query: 64  -----IGVVCHVSNGQQRKNLINQTIEKFGKI-DVVVSNAAANPSVDSILQT-KESVLDK 116
                      VS  +  + L+ Q    F +   VVVS A      D  L    E   DK
Sbjct: 61  PRGNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGIT--QDEFLLHMSEDDWDK 118

Query: 117 LWDINVKSSILLLQDAAPHL--QKGS-SVVLISSIAGYQPQSSMAMYGVTKTALLGLTKA 173
           +  +N+K + L+ Q AA  L       S++ ISSI G         Y  +K  ++GLT+ 
Sbjct: 119 VIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQT 178

Query: 174 LAAEMAP-DTRVNCVAPGFVPT 194
            A E+     R N V PGF+ T
Sbjct: 179 AARELGRHGIRCNSVLPGFIAT 200

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score =  122 bits (310), Expect = 9e-35
 Identities = 57/187 (30%), Positives = 93/187 (49%), Gaps = 7/187 (3%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK-LKARGIEVIGVVCHVS 71
            V +VT +++GIG  IA  LG  G  V+V+  +     E V K ++A G + I     VS
Sbjct: 2   PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVS 61

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQT-KESVLDKLWDINVKSSILLLQ 130
                + ++   I+ +G IDVVV+NA      D++L   K+S  D++ D+N+    L  Q
Sbjct: 62  KEADVEAMMKTAIDAWGTIDVVVNNAGIT--RDTLLIRMKKSQWDEVIDLNLTGVFLCTQ 119

Query: 131 DAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCV 187
            A   +  ++   ++ I+S+ G       A Y   K  ++G +K  A E A  +  VN V
Sbjct: 120 AATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVV 179

Query: 188 APGFVPT 194
            PGF+ +
Sbjct: 180 CPGFIAS 186

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score =  122 bits (308), Expect = 2e-34
 Identities = 52/196 (26%), Positives = 96/196 (48%), Gaps = 4/196 (2%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHV 70
             KV ++T ++ GIG GIA  LG+ GA +++ +R+Q  ++    +++  G   +  V  V
Sbjct: 3   MDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDV 62

Query: 71  SNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQ 130
           ++           ++ +G+IDV+V+NA   P +  +   K    +++ D+N+K  +  + 
Sbjct: 63  TDRHSVAAFAQAAVDTWGRIDVLVNNAGVMP-LSPLAAVKVDEWERMIDVNIKGVLWGIG 121

Query: 131 DAAPHLQKGSS--VVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVA 188
              P ++   S  ++ I SI       + A+Y  TK A+  ++  L  E     RV CV 
Sbjct: 122 AVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVRAISDGLRQESTN-IRVTCVN 180

Query: 189 PGFVPTHFAEYITSND 204
           PG V +  A  IT  +
Sbjct: 181 PGVVESELAGTITHEE 196

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score =  121 bits (305), Expect = 6e-34
 Identities = 51/207 (24%), Positives = 84/207 (40%), Gaps = 22/207 (10%)

Query: 1   MEKMKMAK-RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK-LKA 58
           M            ++A VT    GIG  I +RL  +G  VV             ++  KA
Sbjct: 1   MAHHHHHHMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKA 60

Query: 59  RGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKL- 117
            G +      +V +    K   ++   + G+IDV+V+NA        I  T++ V  K+ 
Sbjct: 61  LGFDFYASEGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAG-------I--TRDVVFRKMT 111

Query: 118 ---WD----INVKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALL 168
              W      N+ S   + +     +  +    ++ ISS+ G + Q     Y   K  + 
Sbjct: 112 REDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIH 171

Query: 169 GLTKALAAEMAP-DTRVNCVAPGFVPT 194
           G T +LA E+A     VN V+PG++ T
Sbjct: 172 GFTMSLAQEVATKGVTVNTVSPGYIGT 198

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score =  121 bits (305), Expect = 9e-34
 Identities = 50/191 (26%), Positives = 92/191 (48%), Gaps = 9/191 (4%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
            +  G+ A+VT +T GIG  IA     +GA V +   ++  + E    L   G +V    
Sbjct: 23  FKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL---GKDVFVFS 79

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSIL-QTKESVLDKLWDINVKSSI 126
            ++S+ +  K L      +   ID++V+NA      D +  + ++   D +  +N+ ++ 
Sbjct: 80  ANLSDRKSIKQLAEVAEREMEGIDILVNNAGIT--RDGLFVRMQDQDWDDVLAVNLTAAS 137

Query: 127 LLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTR 183
            L ++    +  ++   ++ I+SI G         Y   K  L+G +KALA E+A  +  
Sbjct: 138 TLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAAKAGLIGFSKALAQEIASRNIT 197

Query: 184 VNCVAPGFVPT 194
           VNC+APGF+ +
Sbjct: 198 VNCIAPGFIKS 208

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score =  120 bits (304), Expect = 1e-33
 Identities = 52/211 (24%), Positives = 105/211 (49%), Gaps = 12/211 (5%)

Query: 5   KMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG--IE 62
              +R++ ++A+VT ++ GIG  +A  L  +G  VV  +R   N++E   + K+ G    
Sbjct: 25  PGMERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGT 84

Query: 63  VIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINV 122
           +I   C +SN +   ++ +    +   +D+ ++NA      D++L    S    ++++NV
Sbjct: 85  LIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARP-DTLLSGSTSGWKDMFNVNV 143

Query: 123 KSSILLLQDAAPHLQKGSS----VVLISSIAGYQ--PQSSMAMYGVTKTALLGLTKALAA 176
            +  +  ++A   +++ +     ++ I+S++G++  P S    Y  TK A+  LT+ L  
Sbjct: 144 LALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQ 203

Query: 177 EMAP---DTRVNCVAPGFVPTHFAEYITSND 204
           E+       R  C++PG V T FA  +   D
Sbjct: 204 ELREAQTHIRATCISPGVVETQFAFKLHDKD 234

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score =  120 bits (304), Expect = 1e-33
 Identities = 43/208 (20%), Positives = 81/208 (38%), Gaps = 5/208 (2%)

Query: 1   MEKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG 60
              +            +T +T G G   A R    G S+V++ R+++ +     +L A+ 
Sbjct: 10  SSGLVPRGSHMSSTLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKT 69

Query: 61  IEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDI 120
             V+ +   V +       ++   E+F  +  +++NA      D          D + D 
Sbjct: 70  -RVLPLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDT 128

Query: 121 NVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAE 177
           N+K  +   +   P L     G+S+V + S+AG  P     +YG TK  +   +  L  +
Sbjct: 129 NIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRCD 188

Query: 178 MAPDT-RVNCVAPGFVPTHFAEYITSND 204
           +     RV  + PG   + F+      D
Sbjct: 189 LQGTGVRVTNLEPGLCESEFSLVRFGGD 216

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score =  119 bits (300), Expect = 3e-33
 Identities = 37/188 (19%), Positives = 64/188 (34%), Gaps = 7/188 (3%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV--CHV 70
            V  +T S  GIG  + E L   G +V+   R Q +++  +     R   V  V+  C  
Sbjct: 2   SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEADLSTPGGRETAVAAVLDRCGG 61

Query: 71  SNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQT-KESVLDKLWDINVKSSILLL 129
                              + V V+    +  +D + +            +   ++    
Sbjct: 62  VLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPG 121

Query: 130 QDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNC 186
               P +             +A  Q Q+ +A Y  +K A+  L +    + A    R+N 
Sbjct: 122 AAELPMVEAMLAGDEARAIELAEQQGQTHLA-YAGSKYAVTCLARRNVVDWAGRGVRLNV 180

Query: 187 VAPGFVPT 194
           VAPG V T
Sbjct: 181 VAPGAVET 188

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score =  118 bits (297), Expect = 1e-32
 Identities = 47/195 (24%), Positives = 87/195 (44%), Gaps = 17/195 (8%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV 63
             + +    +  +VT   +GIG  IA      G  V ++ R  +  +  +          
Sbjct: 13  GLVPRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEGFL---------- 62

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSIL-QTKESVLDKLWDINV 122
             V C +++ +Q +    +  E  G ++V+++NA    + D +L +  E     + + N+
Sbjct: 63  -AVKCDITDTEQVEQAYKEIEETHGPVEVLIANAGV--TKDQLLMRMSEEDFTSVVETNL 119

Query: 123 KSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP 180
             +  +++ A   +   K   VVLISS+ G    +  A Y  +K  L+G  ++LA E+  
Sbjct: 120 TGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAASKAGLVGFARSLARELGS 179

Query: 181 -DTRVNCVAPGFVPT 194
            +   N VAPGFV T
Sbjct: 180 RNITFNVVAPGFVDT 194

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score =  118 bits (298), Expect = 1e-32
 Identities = 45/205 (21%), Positives = 81/205 (39%), Gaps = 16/205 (7%)

Query: 3   KMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIE 62
            M   K+F+G  AIV+    G+G     RL  +G  VV++    +       +L   G  
Sbjct: 21  SMVTIKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL---GNR 77

Query: 63  VIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLW---- 118
              V  +V++       I    +       VV++     +   + +         +    
Sbjct: 78  AEFVSTNVTSEDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTI 137

Query: 119 DINVKSSILLLQDAAPHLQK--------GSSVVLISSIAGYQPQSSMAMYGVTKTALLGL 170
           D+ +  +  + +  A  +            ++VL +SIAGY+ Q     Y   K  ++GL
Sbjct: 138 DLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQTAYAAAKAGVIGL 197

Query: 171 TKALAAEMAPD-TRVNCVAPGFVPT 194
           T A A +++    RVN +APG + T
Sbjct: 198 TIAAARDLSSAGIRVNTIAPGTMKT 222

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score =  118 bits (297), Expect = 1e-32
 Identities = 49/196 (25%), Positives = 88/196 (44%), Gaps = 21/196 (10%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGVVCH 69
             +VA VT    G+G  I+ RL   G +V VS S +  +V   ++  +  G +       
Sbjct: 24  AKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVD 83

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKL----WD----IN 121
           V++ +  +    + +  FGK+DV+++NA        I  T+++   K+    WD     +
Sbjct: 84  VADFESCERCAEKVLADFGKVDVLINNAG-------I--TRDATFMKMTKGDWDAVMRTD 134

Query: 122 VKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMA 179
           + +   + +     +  ++   +V I S+ G +     A Y   K  + G TK LA E A
Sbjct: 135 LDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAGIHGFTKTLALETA 194

Query: 180 P-DTRVNCVAPGFVPT 194
                VN V+PG++ T
Sbjct: 195 KRGITVNTVSPGYLAT 210

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score =  116 bits (293), Expect = 3e-32
 Identities = 50/188 (26%), Positives = 96/188 (51%), Gaps = 8/188 (4%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK-LKARGIEVIGVV-CHV 70
           + A++T +++GIG  IA RL  +G ++ +   + +   E V +  + RG  ++ V+  ++
Sbjct: 2   RKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANL 61

Query: 71  SNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSIL-QTKESVLDKLWDINVKSSILLL 129
              +    L++Q  E  G +D +V+NA      D++L + K+   + + + N+ +     
Sbjct: 62  LEAEAATALVHQAAEVLGGLDTLVNNAGIT--RDTLLVRMKDEDWEAVLEANLSAVFRTT 119

Query: 130 QDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNC 186
           ++A   +   +   +V I+S+ G       A Y  +K  L+G T+A+A E A     VN 
Sbjct: 120 REAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAGLIGFTRAVAKEYAQRGITVNA 179

Query: 187 VAPGFVPT 194
           VAPGF+ T
Sbjct: 180 VAPGFIET 187

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score =  116 bits (293), Expect = 3e-32
 Identities = 47/198 (23%), Positives = 87/198 (43%), Gaps = 17/198 (8%)

Query: 1   MEKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG 60
                    F  +  +VT   +GIG  IA+RL  +G  V V+ R                
Sbjct: 4   TATEGAKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGS-----------GAP 52

Query: 61  IEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSIL-QTKESVLDKLWD 119
             + GV   V++            E  G ++V+VSNA  +   D+ L +  E   +K+ +
Sbjct: 53  KGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLS--ADAFLMRMTEEKFEKVIN 110

Query: 120 INVKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAE 177
            N+  +  + Q A+  +   K   ++ I S++G     + A Y  +K  ++G+ +++A E
Sbjct: 111 ANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARE 170

Query: 178 MAP-DTRVNCVAPGFVPT 194
           ++  +   N VAPG++ T
Sbjct: 171 LSKANVTANVVAPGYIDT 188

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score =  117 bits (294), Expect = 5e-32
 Identities = 49/208 (23%), Positives = 93/208 (44%), Gaps = 8/208 (3%)

Query: 5   KMAKRFQGKVAIVTASTQGIGFGIAERL---GLEGASVVVSSRKQKNVDEAVVKLKAR-- 59
           K A+R   K  ++T ++ GIG   A            +++++R+ + ++E    +     
Sbjct: 26  KAAERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFP 85

Query: 60  GIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWD 119
             +V      ++  ++ K  I    ++F  ID++V+NA      D + Q     +  ++D
Sbjct: 86  NAKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFD 145

Query: 120 INVKSSILLLQDAAPHLQKGSS--VVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAE 177
            NV + I + Q   P  Q  +S  +V + SIAG     + ++Y  +K A+   T +L  E
Sbjct: 146 TNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCASKFAVGAFTDSLRKE 205

Query: 178 MAPDT-RVNCVAPGFVPTHFAEYITSND 204
           +     RV  +APG V T F+      +
Sbjct: 206 LINTKIRVILIAPGLVETEFSLVRYRGN 233

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score =  117 bits (294), Expect = 9e-32
 Identities = 51/200 (25%), Positives = 85/200 (42%), Gaps = 16/200 (8%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVV---------SSRKQKNVDEAVV 54
           M    RF G+V +VT +  G+G   A      GA VVV           +     D+ V 
Sbjct: 1   MASPLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVE 60

Query: 55  KLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVL 114
           +++ RG + +     V  G+    L+   ++ FG+IDVVV+N A      S  +  +   
Sbjct: 61  EIRRRGGKAVANYDSVEAGE---KLVKTALDTFGRIDVVVNN-AGILRDRSFSRISDEDW 116

Query: 115 DKLWDINVKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTK 172
           D +  ++++ S  + + A  H+  Q    +++ +S +G       A Y   K  LLGL  
Sbjct: 117 DIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLAN 176

Query: 173 ALAAEMAP-DTRVNCVAPGF 191
            L  E    +   N +AP  
Sbjct: 177 TLVIEGRKNNIHCNTIAPNA 196

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score =  114 bits (288), Expect = 2e-31
 Identities = 56/196 (28%), Positives = 100/196 (51%), Gaps = 14/196 (7%)

Query: 3   KMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIE 62
              M     GK +++T ++ GIG  IA  L   G+ V++S   ++ +      LK     
Sbjct: 6   HHHM-IDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNY-- 62

Query: 63  VIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSIL-QTKESVLDKLWDIN 121
               VC+++N ++     +  I K   +D++V NA      D++  + K+   DK+ DIN
Sbjct: 63  -TIEVCNLANKEE----CSNLISKTSNLDILVCNAGIT--SDTLAIRMKDQDFDKVIDIN 115

Query: 122 VKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMA 179
           +K++ +L ++A   +  ++   ++ ISSI G       A Y  +K  L+G+TK+L+ E+A
Sbjct: 116 LKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVA 175

Query: 180 P-DTRVNCVAPGFVPT 194
                VN VAPGF+ +
Sbjct: 176 TRGITVNAVAPGFIKS 191

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score =  113 bits (285), Expect = 3e-31
 Identities = 39/188 (20%), Positives = 82/188 (43%), Gaps = 9/188 (4%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
            + ++T ++ G+G  +A+    EG +  ++ R +  +      L      V      +++
Sbjct: 2   SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNN---VGYRARDLAS 58

Query: 73  GQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDA 132
            Q+ + L  Q          VV +A +      + +     +  L + N+ S+I +L++ 
Sbjct: 59  HQEVEQLFEQL---DSIPSTVVHSAGSGYF-GLLQEQDPEQIQTLIENNLSSAINVLREL 114

Query: 133 APHLQK-GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RVNCVAPG 190
               +    +VV+I S A  QP++  + Y   K A+ GL +++  E+     ++  V PG
Sbjct: 115 VKRYKDQPVNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPG 174

Query: 191 FVPTHFAE 198
            + T F E
Sbjct: 175 GMATEFWE 182

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score =  113 bits (286), Expect = 4e-31
 Identities = 47/208 (22%), Positives = 89/208 (42%), Gaps = 19/208 (9%)

Query: 1   MEKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG 60
           M         +G VA++T    G+G   AERL  +GAS V+        +    KL   G
Sbjct: 3   MAAACR--SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL---G 57

Query: 61  IEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVL-----D 115
              +     V++ +  +  +     KFG++DV V+ A    +  +    K          
Sbjct: 58  NNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQ 117

Query: 116 KLWDINVKSSILLLQDAAPHLQKGS--------SVVLISSIAGYQPQSSMAMYGVTKTAL 167
           ++ D+N+  +  +++  A  + +           ++  +S+A ++ Q   A Y  +K  +
Sbjct: 118 RVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGI 177

Query: 168 LGLTKALAAEMAPD-TRVNCVAPGFVPT 194
           +G+T  +A ++AP   RV  +APG   T
Sbjct: 178 VGMTLPIARDLAPIGIRVMTIAPGLFGT 205

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score =  113 bits (286), Expect = 5e-31
 Identities = 46/200 (23%), Positives = 90/200 (45%), Gaps = 10/200 (5%)

Query: 5   KMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVI 64
           +M +    K+ ++T ++ GIG  IA R   EG  +++ +R+     E +  L       +
Sbjct: 9   QMGRGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRV----ERLKALNLP--NTL 62

Query: 65  GVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKS 124
                V++       I +  + +G  D +V+NA     +  I   + +   +++D+NV  
Sbjct: 63  CAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMML-LGQIDTQEANEWQRMFDVNVLG 121

Query: 125 SILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT 182
            +  +Q     +  +   +++ ISSIAG +     A Y  TK A+  +++ +  E+A   
Sbjct: 122 LLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENVREEVAASN 181

Query: 183 -RVNCVAPGFVPTHFAEYIT 201
            RV  +AP  V T    + T
Sbjct: 182 VRVMTIAPSAVKTELLSHTT 201

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score =  113 bits (285), Expect = 6e-31
 Identities = 43/214 (20%), Positives = 68/214 (31%), Gaps = 57/214 (26%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
            + +++    GIG    + L   G  +V          +A             V+  +S 
Sbjct: 2   SIIVISGCATGIGAATRKVLEAAGHQIVGIDI-----RDA------------EVIADLST 44

Query: 73  GQQRKNLINQTIEK-FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQD 131
            + RK  I   + K    +D +V  A   P           VL  +  +N   +  L+  
Sbjct: 45  AEGRKQAIADVLAKCSKGMDGLVLCAGLGPQTK--------VLGNVVSVNYFGATELMDA 96

Query: 132 AAPHLQKG--SSVVLISSIAGYQ----------------------------PQSSMAMYG 161
             P L+KG   + V+ISS+A                                Q     Y 
Sbjct: 97  FLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYA 156

Query: 162 VTKTALLGLTKALAAEMAPD-TRVNCVAPGFVPT 194
            +K AL    +  AA       R+N +APG   T
Sbjct: 157 GSKNALTVAVRKRAAAWGEAGVRLNTIAPGATET 190

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score =  117 bits (295), Expect = 1e-30
 Identities = 52/208 (25%), Positives = 89/208 (42%), Gaps = 28/208 (13%)

Query: 1   MEKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVV---------SSRKQKNVDE 51
           M       R+ G+VA+VT +  G+G   A      GA VVV             Q+  D 
Sbjct: 8   MSSSDGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADI 67

Query: 52  AVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTK- 110
            V +++  G E +     V +G +   +I   I+ FG++D++V+NA        IL+ + 
Sbjct: 68  VVDEIRKAGGEAVADYNSVIDGAK---VIETAIKAFGRVDILVNNAG-------ILRDRS 117

Query: 111 -ESVLDKLWD----INVKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVT 163
                ++ W+    +++K S    Q A P++  Q    +++ SS +G         Y   
Sbjct: 118 LVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQVNYTAA 177

Query: 164 KTALLGLTKALAAEMAP-DTRVNCVAPG 190
           K  L+GL   +A E A  +   N + P 
Sbjct: 178 KMGLIGLANTVAIEGARNNVLCNVIVPT 205

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score =  115 bits (291), Expect = 2e-30
 Identities = 58/205 (28%), Positives = 89/205 (43%), Gaps = 32/205 (15%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
             K   GKVA+VT + +GIG  IAE    +GA+VV             +K  A  +    
Sbjct: 207 WDKPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGA---AEDLKRVADKVGGTA 263

Query: 66  VVCHVSNGQQRKNLINQTIEKFG-KIDVVVSNAAANPSVDSILQTKESVLDKL------- 117
           +   V+       +     E  G K+D++V+NA        I  T+    DKL       
Sbjct: 264 LTLDVTADDAVDKITAHVTEHHGGKVDILVNNAG-------I--TR----DKLLANMDEK 310

Query: 118 -WD----INVKSSILLLQDAAPH--LQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGL 170
            WD    +N+ +   L +    +  + +G  V+ +SS+AG         Y  TK  ++GL
Sbjct: 311 RWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTKAGMIGL 370

Query: 171 TKALAAEMAP-DTRVNCVAPGFVPT 194
            +ALA  +A     +N VAPGF+ T
Sbjct: 371 AEALAPVLADKGITINAVAPGFIET 395

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score =  111 bits (281), Expect = 2e-30
 Identities = 50/203 (24%), Positives = 87/203 (42%), Gaps = 17/203 (8%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV 63
           M M  + + +V IVT ++ G+G  +   L  EGA+V+    K    +E   +L   G  V
Sbjct: 1   MVM--QLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL---GAAV 55

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLD---KLWDI 120
                 V+N       +    ++FG +  +V+ A   P    + ++    LD   +   +
Sbjct: 56  RFRNADVTNEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAV 115

Query: 121 NVKSSILLLQDAAPHLQKGS--------SVVLISSIAGYQPQSSMAMYGVTKTALLGLTK 172
           N+  +  +++ AA  + +G          +V  +SIA +  Q   A Y  +K  +  LT 
Sbjct: 116 NLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQAAYAASKGGVAALTL 175

Query: 173 ALAAEMAPD-TRVNCVAPGFVPT 194
             A E+A    RV  +APG   T
Sbjct: 176 PAARELARFGIRVVTIAPGIFDT 198

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score =  116 bits (293), Expect = 2e-30
 Identities = 49/197 (24%), Positives = 83/197 (42%), Gaps = 16/197 (8%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVV---------SSRKQKNVDEAVVKL 56
               F+ KV I+T +  G+G   +      GA VVV              K  D  V ++
Sbjct: 2   SPVDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEI 61

Query: 57  KARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDK 116
              G   +    +V +G     ++   ++ FG + V+++NA       S+ +  E     
Sbjct: 62  VKNGGVAVADYNNVLDGD---KIVETAVKNFGTVHVIINNAGILRDA-SMKKMTEKDYKL 117

Query: 117 LWDINVKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKAL 174
           + D+++  +  + + A P+   QK   +V  SS AG       A Y   K+ALLG  + L
Sbjct: 118 VIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQANYASAKSALLGFAETL 177

Query: 175 AAEMAP-DTRVNCVAPG 190
           A E A  + + N +AP 
Sbjct: 178 AKEGAKYNIKANAIAPL 194

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score =  106 bits (266), Expect = 1e-26
 Identities = 50/193 (25%), Positives = 90/193 (46%), Gaps = 8/193 (4%)

Query: 1   MEKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG 60
                     + KV ++T +  G+G   A+     GA VVV+  K  +  + V ++KA G
Sbjct: 311 DASGAPTVSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFK--DATKTVDEIKAAG 368

Query: 61  IEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDI 120
            E       V+   +   +I   I+K+G ID++V+NA       S  +  +   D +  +
Sbjct: 369 GEAWPDQHDVAKDSEA--IIKNVIDKYGTIDILVNNAGILRDR-SFAKMSKQEWDSVQQV 425

Query: 121 NVKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEM 178
           ++  +  L + A P+   ++   ++ I+S +G       A Y  +K  +LGL+K +A E 
Sbjct: 426 HLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGILGLSKTMAIEG 485

Query: 179 AP-DTRVNCVAPG 190
           A  + +VN VAP 
Sbjct: 486 AKNNIKVNIVAPH 498

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score =  110 bits (278), Expect = 9e-30
 Identities = 55/195 (28%), Positives = 97/195 (49%), Gaps = 9/195 (4%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
           M++    KV +VT ++ G G  IAE     G +V+ ++R+ + +D+ V     R      
Sbjct: 1   MSE--SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDR---AEA 55

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSS 125
           +   V++G++   +    + ++G++DV+V+NA     V +  +T E  L  L++++V   
Sbjct: 56  ISLDVTDGERIDVVAADVLARYGRVDVLVNNAGRT-QVGAFEETTERELRDLFELHVFGP 114

Query: 126 ILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DT 182
             L +   P +  +   SVV ISS  G    +  + Y  TK AL  L++ LA E+AP   
Sbjct: 115 ARLTRALLPQMRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEVAPFGI 174

Query: 183 RVNCVAPGFVPTHFA 197
           +V  V PG   T+  
Sbjct: 175 KVLIVEPGAFRTNLF 189

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score =  111 bits (279), Expect = 1e-29
 Identities = 57/201 (28%), Positives = 82/201 (40%), Gaps = 20/201 (9%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVV---------SSRKQKNVDEAVVK-LKA 58
              G+V IVT +  GIG   A     EGA VVV         S     +  ++VV  + A
Sbjct: 24  VVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITA 83

Query: 59  RGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLW 118
            G E +    +V++  Q   LI   +E FG +DV+V+NA        I  T E   D + 
Sbjct: 84  AGGEAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDR-MIANTSEEEFDAVI 142

Query: 119 DINVKSSILLLQDAAPHL--------QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGL 170
            +++K     ++ AA +              ++  SS AG Q       Y   K  +  L
Sbjct: 143 AVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQGNYSAAKAGIATL 202

Query: 171 TKALAAEMAP-DTRVNCVAPG 190
           T   AAEM      VN +AP 
Sbjct: 203 TLVGAAEMGRYGVTVNAIAPS 223

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score =  104 bits (262), Expect = 5e-28
 Identities = 36/187 (19%), Positives = 76/187 (40%), Gaps = 19/187 (10%)

Query: 15  AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQ 74
            ++T +T G+G   A  L  +G  +++S R+   + E   ++ AR      +   +++  
Sbjct: 3   VLITGATGGLGGAFARAL--KGHDLLLSGRRAGALAELAREVGARA-----LPADLADEL 55

Query: 75  QRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAP 134
           + K L+    E+ G +D++V          S+ +    +++++   ++ ++  +L     
Sbjct: 56  EAKALL----EEAGPLDLLVHAVGKAG-RASVREAGRDLVEEMLAAHLLTAAFVL----K 106

Query: 135 HL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNCVAPGF 191
           H   QKG+  V   +   Y      A Y   K AL    +A   E+  +   +  V    
Sbjct: 107 HARFQKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAYLEAARKELLREGVHLVLVRLPA 166

Query: 192 VPTHFAE 198
           V T    
Sbjct: 167 VATGLWA 173

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score =  105 bits (265), Expect = 6e-28
 Identities = 48/235 (20%), Positives = 84/235 (35%), Gaps = 48/235 (20%)

Query: 12  GKVAIVTASTQGIGFGIAERLG-LEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHV 70
             VA+VT   +GIG  I   L  L    VV+++R       AV +L+A G+        +
Sbjct: 4   IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDI 63

Query: 71  SNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQ 130
            + Q  + L +   +++G +DV+V+NA     V           +     N   +  +  
Sbjct: 64  DDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQA-EVTMKTNFFGTRDVCT 122

Query: 131 DAAPHLQKGSSVVLISSIAGYQPQSS---------------------------------- 156
           +  P ++    VV +SSI   +   S                                  
Sbjct: 123 ELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGV 182

Query: 157 -------MAMYGVTKTALLGLTKALAAEMAPDTR-----VNCVAPGFVPTHFAEY 199
                   + YGVTK  +  L++  A +++   +     +N   PG+V T  A  
Sbjct: 183 HQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP 237

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score =  103 bits (259), Expect = 4e-27
 Identities = 44/196 (22%), Positives = 83/196 (42%), Gaps = 9/196 (4%)

Query: 14  VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCHVSN 72
           + +VT +T G G  I  R   +G  V+ + R+Q    E + +LK   G  +      V N
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQ----ERLQELKDELGDNLYIAQLDVRN 57

Query: 73  GQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDA 132
               + ++     ++  ID++V+NA     ++   +      + + D N K  + + +  
Sbjct: 58  RAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAV 117

Query: 133 APHLQKGSS--VVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RVNCVAP 189
            P + + +   ++ I S AG  P +   +YG TK  +   +  L  ++     RV  + P
Sbjct: 118 LPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEP 177

Query: 190 GFVP-THFAEYITSND 204
           G V  T F+      D
Sbjct: 178 GLVGGTEFSNVRFKGD 193

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score =  101 bits (255), Expect = 1e-26
 Identities = 47/200 (23%), Positives = 82/200 (41%), Gaps = 21/200 (10%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
             +  VA+VT    G+G    +RL   GA VVV   + ++V   +      G        
Sbjct: 6   EIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADL------GDRARFAAA 59

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNA---AANPSVDSILQTKESVLDKLWDINVKSS 125
            V++     + +    E  G + +VV+ A    A   +        +   K+ DIN+  S
Sbjct: 60  DVTDEAAVASAL-DLAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGS 118

Query: 126 ILLLQDAAPHLQKGSS----------VVLISSIAGYQPQSSMAMYGVTKTALLGLTKALA 175
             +L+ AA  + K             ++  +S+A +  Q   A Y  +K  ++G+T  +A
Sbjct: 119 FNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIA 178

Query: 176 AEMAPD-TRVNCVAPGFVPT 194
            ++A    RV  +APG   T
Sbjct: 179 RDLASHRIRVMTIAPGLFDT 198

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score =  100 bits (252), Expect = 4e-26
 Identities = 39/211 (18%), Positives = 75/211 (35%), Gaps = 23/211 (10%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERL---GLEGASVVVSSRKQKNVDEAVVKLKARGIE 62
           + +       ++T   +G+G G+ + L         +  + R ++   E    L      
Sbjct: 15  VPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELE-DLAKNHSN 73

Query: 63  VIGVVCHVSNGQQRKNLINQTIEKFG--KIDVVVSNAAANPSVDSILQTKESVLDKLWDI 120
           +  +   + N      L+           ++V+ +NA   P    I   +   L      
Sbjct: 74  IHILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQT 133

Query: 121 NVKSSILLLQDAAPHLQKGSS-------------VVLISSIAG---YQPQSSMAMYGVTK 164
           N    I+L +   P L+K +              ++ +SSI G         M  Y  +K
Sbjct: 134 NTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSK 193

Query: 165 TALLGLTKALAAEMAPD-TRVNCVAPGFVPT 194
           +AL   TK+L+ ++ P       + PG+V T
Sbjct: 194 SALNAATKSLSVDLYPQRIMCVSLHPGWVKT 224

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score =  102 bits (255), Expect = 5e-26
 Identities = 50/209 (23%), Positives = 83/209 (39%), Gaps = 14/209 (6%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV 63
           M M+K    K+ ++T ++ G G   AE L   G  V  S R     + + V+  A     
Sbjct: 1   MVMSK----KIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARD 56

Query: 64  IGVVCH-----VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLW 118
             V        V +       I+Q I + G+IDV++ NA                  +L+
Sbjct: 57  NDVDLRTLELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHM-VFGPAEAFTPEQFAELY 115

Query: 119 DINVKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQS-SMAMYGVTKTALLGLTKALA 175
           DINV S+  + + A PH+  QK   ++ ISS +        +A Y   K A+  +    A
Sbjct: 116 DINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPYLAPYFAAKAAMDAIAVQYA 175

Query: 176 AEMAP-DTRVNCVAPGFVPTHFAEYITSN 203
            E++      + + PG   +    +  S 
Sbjct: 176 RELSRWGIETSIIVPGAFTSGTNHFAHSG 204

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score = 97.4 bits (243), Expect = 7e-25
 Identities = 44/207 (21%), Positives = 87/207 (42%), Gaps = 28/207 (13%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVV--SSRKQKNVDEAVVKLKARGIEVIGVVCHV 70
              +VT + +GIG G+ ++L  +     +  ++R  +   E    +K   + V+ +   V
Sbjct: 4   GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELK-SIKDSRVHVLPLT--V 60

Query: 71  SNGQQRKNLINQTIEKFG--KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
           +  +     +++  E  G   + ++++NA    S  +  +   +V+ +  D+N  S +LL
Sbjct: 61  TCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLL 120

Query: 129 LQDAAPHLQKGSS-------------VVLISSIAG-------YQPQSSMAMYGVTKTALL 168
            Q   P L+  +S             V+ ISS  G          Q  +  Y ++K A+ 
Sbjct: 121 TQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAIN 180

Query: 169 GLTKALAAEMAPD-TRVNCVAPGFVPT 194
              + LA ++  D   V    PG+V T
Sbjct: 181 MFGRTLAVDLKDDNVLVVNFCPGWVQT 207

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score = 96.5 bits (241), Expect = 1e-24
 Identities = 46/194 (23%), Positives = 80/194 (41%), Gaps = 25/194 (12%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           + A+VT    G+G   A  L   G  VVV       +D     L+  G ++I V   V+ 
Sbjct: 3   RSALVTGGASGLGRAAALALKARGYRVVV-------LD-----LRREGEDLIYVEGDVTR 50

Query: 73  GQQRKNLINQTIEKFGKIDVVVSNA---AANPSVDSILQTKESVLDKLWDINVKSSILLL 129
            +  +  + +  E    +  VVS A    A   +            ++ ++N+  +  +L
Sbjct: 51  EEDVRRAVARAQE-EAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVL 109

Query: 130 QDAAPHLQKGS--------SVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD 181
           + AA  +++           +V  +S+A ++ Q   A Y  +K  ++ LT   A E+A  
Sbjct: 110 RLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGW 169

Query: 182 -TRVNCVAPGFVPT 194
             RV  VAPG   T
Sbjct: 170 GIRVVTVAPGLFDT 183

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score = 95.4 bits (237), Expect = 1e-23
 Identities = 59/270 (21%), Positives = 91/270 (33%), Gaps = 77/270 (28%)

Query: 1   MEKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG 60
           M +       + + A+VT   +GIGF I ++L   G  VV++ R      EAV KLK   
Sbjct: 1   MPETCPNTVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSN 60

Query: 61  IE-VIGVVCHVSNGQQ-RKNLINQTIEKFGKIDVVVSNAA-------------------- 98
            E V+     V++      +L +     FGK+D++V+NA                     
Sbjct: 61  HENVVFHQLDVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGE 120

Query: 99  ---------ANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSS--VVLISS 147
                      P    ++     + ++   IN      + +   P LQ   S  +V +SS
Sbjct: 121 DSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSS 180

Query: 148 IAGYQPQSSM-------------------------------------------AMYGVTK 164
             G     S                                            A Y  +K
Sbjct: 181 STGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSK 240

Query: 165 TALLGLTKALAAEMAPDTRVNCVAPGFVPT 194
             L   T+ LA ++ P  +VNCV PG V T
Sbjct: 241 ACLNAYTRVLANKI-PKFQVNCVCPGLVKT 269

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score = 85.1 bits (211), Expect = 8e-20
 Identities = 45/196 (22%), Positives = 80/196 (40%), Gaps = 14/196 (7%)

Query: 13  KVAIVT-ASTQGIGFGIAERL---GLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
            V ++T  S+ GIG  +A RL     +   V  + R  K         +A       +  
Sbjct: 3   TVVLITGCSS-GIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLET 61

Query: 69  H---VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSS 125
               V + +       +  E  G++DV+V NA     +  +    E  +  + D+NV  +
Sbjct: 62  LQLDVRDSKSVAAARERVTE--GRVDVLVCNAGLG-LLGPLEALGEDAVASVLDVNVVGT 118

Query: 126 ILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DT 182
           + +LQ   P +  +    V++  S+ G        +Y  +K AL GL ++LA  + P   
Sbjct: 119 VRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGV 178

Query: 183 RVNCVAPGFVPTHFAE 198
            ++ +  G V T F E
Sbjct: 179 HLSLIECGPVHTAFME 194

>4alk_A ENR, enoyl-[acyl-carrier-protein] reductase [NADPH]; oxidoreductase, short-chain dehydrogenase/reductase superfam fatty acid biosynthesis; HET: NAP E9P GLU; 1.90A {Staphylococcus aureus} PDB: 4alj_A* 4ali_A* 4alm_A 4aln_A 3gr6_A* 3gns_A* 3gnt_A 4all_A* Length = 282

 Score = 68.4 bits (168), Expect = 4e-14
 Identities = 49/200 (24%), Positives = 91/200 (45%), Gaps = 25/200 (12%)

Query: 11  QGKVAIVT--ASTQGIGFGIAERLGLEGASVVVS---SRKQKNVDEAVVKLKARGIEVIG 65
           + K  ++   A+ + I FG+A+ L   GA +V +    R +K +++ + +L      +  
Sbjct: 31  ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQ 90

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVV-SNAAANPS------VDSILQTKESVLDKLW 118
               V + ++  N   Q  +  G ID V  S A AN         ++   ++E  L    
Sbjct: 91  --IDVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSET---SREGFLLAQ- 144

Query: 119 DINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMY---GVTKTALLGLTKALA 175
           DI+  S  ++  +A   + +G S+V  + + G   + ++  Y   GV K +L    K LA
Sbjct: 145 DISSYSLTIVAHEAKKLMPEGGSIVATTYLGG---EFAVQNYNVMGVAKASLEANVKYLA 201

Query: 176 AEMAPD-TRVNCVAPGFVPT 194
            ++ PD  RVN ++ G + T
Sbjct: 202 LDLGPDNIRVNAISAGPIRT 221

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* Length = 261

 Score = 67.6 bits (166), Expect = 8e-14
 Identities = 48/205 (23%), Positives = 87/205 (42%), Gaps = 27/205 (13%)

Query: 6   MAKRFQGKVAIVT--ASTQGIGFGIAERLGLEGASVVVS---SRKQKNVDEAVVKLKARG 60
           +     GK A+V    + + +GF IA +L   GA V +S    R +   ++    L    
Sbjct: 2   LTVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGAL 61

Query: 61  IEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVV-SNAAANPS------VDSILQTKESV 113
           +        V+  ++   L     E FG +D +V + A A         +D+    ++  
Sbjct: 62  L----FRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDT---RRQDW 114

Query: 114 LDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMY---GVTKTALLGL 170
           L  L +++  S + + + A P L++G  +V ++  A    +  +  Y    + K AL   
Sbjct: 115 LLAL-EVSAYSLVAVARRAEPLLREGGGIVTLTYYAS---EKVVPKYNVMAIAKAALEAS 170

Query: 171 TKALAAEMAPD-TRVNCVAPGFVPT 194
            + LA E+ P   RVN ++ G V T
Sbjct: 171 VRYLAYELGPKGVRVNAISAGPVRT 195

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* Length = 266

 Score = 67.2 bits (165), Expect = 1e-13
 Identities = 49/205 (23%), Positives = 91/205 (44%), Gaps = 25/205 (12%)

Query: 6   MAKRFQGKVAIVT--ASTQGIGFGIAERLGLEGASVVVS---SRKQKNVDEAVVKLKARG 60
           M    +G+  +V   A+ + I +GIA  L   GA ++ +    R +K+V E    L    
Sbjct: 1   MNFSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRND 60

Query: 61  IEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVV-SNAAANPS------VDSILQTKESV 113
             ++   C V+N  + +       E+ G I  +    A AN        +++    ++  
Sbjct: 61  SIILP--CDVTNDAEIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNT---NRDGF 115

Query: 114 LDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMY---GVTKTALLGL 170
           L    +I+  S   +++ A P + +G S+V ++ + G   +  M  Y   GV K +L   
Sbjct: 116 LLAH-NISSYSLTAVVKAARPMMTEGGSIVTLTYLGG---ELVMPNYNVMGVAKASLDAS 171

Query: 171 TKALAAEMAPD-TRVNCVAPGFVPT 194
            K LAA++  +  RVN ++ G + T
Sbjct: 172 VKYLAADLGKENIRVNSISAGPIRT 196

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* Length = 265

 Score = 65.7 bits (161), Expect = 4e-13
 Identities = 45/200 (22%), Positives = 87/200 (43%), Gaps = 26/200 (13%)

Query: 11  QGKVAIVT--ASTQGIGFGIAERLGLEGASVVVS---SRKQKNVDEAVVKLKARGIEVIG 65
            GK  +VT  AS   I +GIA+ +  EGA +  +    + +  V+E   +L +  +    
Sbjct: 8   SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIV---- 63

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVV-SNAAANPS------VDSILQTKESVLDKLW 118
           + C V+       +  +  + + K D  V S   A         V+++  T+E       
Sbjct: 64  LQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAV--TREGFKIAH- 120

Query: 119 DINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMY---GVTKTALLGLTKALA 175
           DI+  S + + +     L  GS+++ +S +     + ++  Y   G+ K +L    + +A
Sbjct: 121 DISSYSFVAMAKACRSMLNPGSALLTLSYLGA---ERAIPNYNVMGLAKASLEANVRYMA 177

Query: 176 AEMAPD-TRVNCVAPGFVPT 194
             M P+  RVN ++ G + T
Sbjct: 178 NAMGPEGVRVNAISAGPIRT 197

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} Length = 271

 Score = 65.3 bits (160), Expect = 6e-13
 Identities = 45/200 (22%), Positives = 82/200 (41%), Gaps = 26/200 (13%)

Query: 11  QGKVAIVT--ASTQGIGFGIAERLGLEGASVVVS---SRKQKNVDEAVVKLKARGIEVIG 65
            GK  ++T   S + I +GIA+    EGA +  +    R +  + E   +  +     + 
Sbjct: 13  DGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSE----LV 68

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVV-SNAAANPS------VDSILQTKESVLDKLW 118
             C V++  Q   L       +  +D +V S   A         +D +  T+E+      
Sbjct: 69  FPCDVADDAQIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGL--TRENFRIAH- 125

Query: 119 DINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMY---GVTKTALLGLTKALA 175
           DI+  S   L + A P L   +S++ +S +     + ++  Y   G+ K AL    + LA
Sbjct: 126 DISAYSFPALAKAALPMLSDDASLLTLSYLGA---ERAIPNYNTMGLAKAALEASVRYLA 182

Query: 176 AEMAPD-TRVNCVAPGFVPT 194
             +     RVN ++ G + T
Sbjct: 183 VSLGAKGVRVNAISAGPIKT 202

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* Length = 275

 Score = 64.9 bits (159), Expect = 7e-13
 Identities = 49/200 (24%), Positives = 88/200 (44%), Gaps = 27/200 (13%)

Query: 11  QGKVAIVT--ASTQGIGFGIAERLGLEGASVVVSS---RKQKNVDEAVVKLKARGIEVIG 65
           +GK  ++   A+ + I +GIA+    +GA++  +      +K V     +L +  +    
Sbjct: 5   KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYV---- 60

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVV-SNAAANPS------VDSILQTKESVLDKLW 118
               VS  +  K+L N   +  G +D +V S A A         +++   +K +    + 
Sbjct: 61  YELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLET---SKSAFNTAM- 116

Query: 119 DINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMY---GVTKTALLGLTKALA 175
           +I+V S I L     P L  G+SV+ +S +        MA Y   G+ K AL    + LA
Sbjct: 117 EISVYSLIELTNTLKPLLNNGASVLTLSYLGS---TKYMAHYNVMGLAKAALESAVRYLA 173

Query: 176 AEMAPD-TRVNCVAPGFVPT 194
            ++     RVN ++ G + T
Sbjct: 174 VDLGKHHIRVNALSAGPIRT 193

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* Length = 296

 Score = 65.4 bits (160), Expect = 7e-13
 Identities = 50/209 (23%), Positives = 92/209 (44%), Gaps = 27/209 (12%)

Query: 2   EKMKMAKRFQGKVAIVT--ASTQGIGFGIAERLGLEGASVVVS---SRKQKNVDEAVVKL 56
             M+     +GK  ++   A+ + + +GIA+ +  +GA V ++      +K VD     L
Sbjct: 20  GSMRTGMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESL 79

Query: 57  KARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVV-SNAAANPS------VDSILQT 109
             +    + V C VS+ +   N+     E++G +D VV + A ++ +      VD+   +
Sbjct: 80  GVK----LTVPCDVSDAESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDT---S 132

Query: 110 KESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMY---GVTKTA 166
             + L  +  I+  S   +   A P +  G S++ +S       +  +  Y   GV K A
Sbjct: 133 LGNFLTSM-HISCYSFTYIASKAEPLMTNGGSILTLSYYGA---EKVVPHYNVMGVCKAA 188

Query: 167 LLGLTKALAAEMAPD-TRVNCVAPGFVPT 194
           L    K LA ++     RVN ++ G V T
Sbjct: 189 LEASVKYLAVDLGKQQIRVNAISAGPVRT 217

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... Length = 269

 Score = 64.9 bits (159), Expect = 8e-13
 Identities = 42/199 (21%), Positives = 75/199 (37%), Gaps = 21/199 (10%)

Query: 6   MAKRFQGKVAIVT--ASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV 63
           M     GK  +V+   +   I F IA     +GA +V++   +  + + +         +
Sbjct: 1   MTGLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPL 60

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFG---KIDVVV-SNAAANPS---VDSILQT-KESVLD 115
           +     V N +   +L  +  E  G   K+D VV S      +   ++         V  
Sbjct: 61  L--ELDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSK 118

Query: 116 KLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMY---GVTKTALLGLTK 172
            +  I+  S   + +   P +  G S+V +     + P  +M  Y    V K+AL  + +
Sbjct: 119 GI-HISAYSYASMAKALLPIMNPGGSIVGMD----FDPSRAMPAYNWMTVAKSALESVNR 173

Query: 173 ALAAEMAPD-TRVNCVAPG 190
            +A E      R N VA G
Sbjct: 174 FVAREAGKYGVRSNLVAAG 192

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* Length = 293

 Score = 65.0 bits (159), Expect = 9e-13
 Identities = 44/207 (21%), Positives = 88/207 (42%), Gaps = 27/207 (13%)

Query: 4   MKMAKRFQGKVAIVT--ASTQGIGFGIAERLGLEGASVVVS---SRKQKNVDEAVVKLKA 58
              +   QGK  ++   A+ + I +GIA+     GA +  +      +K V+    +L A
Sbjct: 23  TAQSGLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGA 82

Query: 59  RGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVV-SNAAANPS------VDSILQTKE 111
                +   C V++      +     +K+GK+D +V +   ++        +D+   ++ 
Sbjct: 83  F----VAGHCDVADAASIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDT---SEA 135

Query: 112 SVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMY---GVTKTALL 168
           +  + +  I+V S   + + A   +  G S++ ++       +  M  Y   GV K AL 
Sbjct: 136 NFTNTM-LISVYSLTAVSRRAEKLMADGGSILTLTYYGA---EKVMPNYNVMGVAKAALE 191

Query: 169 GLTKALAAEMAPD-TRVNCVAPGFVPT 194
              K LA ++ P   RVN ++ G + T
Sbjct: 192 ASVKYLAVDLGPQNIRVNAISAGPIKT 218

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 2jjy_A* Length = 280

 Score = 63.4 bits (155), Expect = 3e-12
 Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 26/200 (13%)

Query: 11  QGKVAIVT--ASTQGIGFGIAERLGLEGASVVVS--SRKQKNVDEAVVKLKARGIEVIGV 66
            GK  ++T   S + I +GIA+ +  EGA +  +   + +  V++   +     +    +
Sbjct: 25  AGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAV----L 80

Query: 67  VCHVSNGQQRKNLINQTIEKFGKIDVVV-SNAAANPS------VDSILQTKESVLDKLWD 119
            C V + Q+ K+L  +  + +  +D +V S A A         +D +  T+E       D
Sbjct: 81  PCDVISDQEIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCV--TREGFSIAH-D 137

Query: 120 INVKSSILLLQDAAPHLQ-KGSSVVLISSIAGYQPQSSMAMY---GVTKTALLGLTKALA 175
           I+  S   L ++    ++ + +S+V ++ I     + +M  Y   GV K +L    +  A
Sbjct: 138 ISAYSFAALAKEGRSMMKNRNASMVALTYIGA---EKAMPSYNTMGVAKASLEATVRYTA 194

Query: 176 AEMAPD-TRVNCVAPGFVPT 194
             +  D  +VN V+ G + T
Sbjct: 195 LALGEDGIKVNAVSAGPIKT 214

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* Length = 315

 Score = 61.7 bits (150), Expect = 1e-11
 Identities = 53/223 (23%), Positives = 84/223 (37%), Gaps = 40/223 (17%)

Query: 11  QGKVAIVT--ASTQGIGFGIAERLGLEGASVVVS-----------SRKQKNVDEAVVKLK 57
           +G+ A V   A + G G+ IA+ L   GA V +            S +   +DE      
Sbjct: 8   RGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPD 67

Query: 58  ARGIEVIGVV-------------CHVSNGQQRKNLINQTI--------EKFGKIDVVVSN 96
              IE  GV                + + ++   +   TI        +  G ID++V +
Sbjct: 68  GSLIEFAGVYPLDAAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHS 127

Query: 97  AAANPSVD-SILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ--P 153
            A  P V   +L+T           +  S + LLQ   P + +G S V +S +A  +  P
Sbjct: 128 LANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIMNEGGSAVTLSYLAAERVVP 187

Query: 154 QSSMAMYGVTKTALLGLTKALAAEMAPDT--RVNCVAPGFVPT 194
                M    K AL   T+ LA E       RVN ++ G + +
Sbjct: 188 GYGGGM-SSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKS 229

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} Length = 285

 Score = 59.9 bits (146), Expect = 5e-11
 Identities = 53/201 (26%), Positives = 94/201 (46%), Gaps = 28/201 (13%)

Query: 11  QGKVAIVT--ASTQGIGFGIAERLGLEGASVVVSS---RKQKNVDEAVVKLKARGIEVIG 65
           +GK A++T  A+ + I +GIA+    EGA +  +    + +K V E      +  +    
Sbjct: 20  EGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLV---- 75

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVV-SNAAANPS------VDSILQTKESVLDKLW 118
           V C VS  +  KNL     E +G +D++V S A A         +D+   ++E     + 
Sbjct: 76  VKCDVSLDEDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDT---SREGFKIAM- 131

Query: 119 DINVKSSILLLQDAAPHLQ-KGSSVVLISSIAGYQPQSSMAMY---GVTKTALLGLTKAL 174
           DI+V S I L ++  P ++ +  ++V +S       +  +  Y   G+ K AL    + L
Sbjct: 132 DISVYSLIALTRELLPLMEGRNGAIVTLSYYGA---EKVVPHYNVMGIAKAALESTVRYL 188

Query: 175 AAEMAPD-TRVNCVAPGFVPT 194
           A ++A    R+N ++ G V T
Sbjct: 189 AYDIAKHGHRINAISAGPVKT 209

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 58.7 bits (142), Expect = 1e-10
 Identities = 23/124 (18%), Positives = 38/124 (30%), Gaps = 13/124 (10%)

Query: 3   KMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIE 62
                   +GK A+V A T  +G   A  L  EGA VV+  RK      A   +  R  +
Sbjct: 110 VKAAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF-K 168

Query: 63  VIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINV 122
           V       ++   R   +            V +  A    +       ++       I +
Sbjct: 169 VNVTAAETADDASRAEAVKG-------AHFVFTAGAIGLELLP-----QAAWQNESSIEI 216

Query: 123 KSSI 126
            +  
Sbjct: 217 VADY 220

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* Length = 297

 Score = 58.6 bits (142), Expect = 1e-10
 Identities = 48/223 (21%), Positives = 78/223 (34%), Gaps = 40/223 (17%)

Query: 11  QGKVAIVT--ASTQGIGFGIAERLGLEGASVVVS------------------------SR 44
           +GK A +   A   G G+ +A+ L   GA ++V                           
Sbjct: 7   RGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPD 66

Query: 45  KQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTI--------EKFGKIDVVVSN 96
                 + V  L A       V   V   ++     N T+        + FG ID++V +
Sbjct: 67  GSLMEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHS 126

Query: 97  AAANPSVD-SILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ--P 153
            A  P V   +L+T           +  S + LL    P +  G + + ++ IA  +  P
Sbjct: 127 LANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASERIIP 186

Query: 154 QSSMAMYGVTKTALLGLTKALAAEMAPDT--RVNCVAPGFVPT 194
                M    K AL   T+ LA E       RVN ++ G + +
Sbjct: 187 GYGGGM-SSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGS 228

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... Length = 329

 Score = 57.2 bits (138), Expect = 5e-10
 Identities = 38/222 (17%), Positives = 82/222 (36%), Gaps = 40/222 (18%)

Query: 12  GKVAIVT--ASTQGIGFGIAERLGLEGASVV-----------VSSRKQKNVDEAVVKLKA 58
             +  +     T G G+GIA+ L      ++           + + K    D  ++  K 
Sbjct: 2   EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKD 61

Query: 59  RGIEVIGVV---------------------CHVSNGQQRKNLINQTIEKFGKIDVVV-SN 96
           + + ++ ++                      ++      +++ N   +K+GKI+++V S 
Sbjct: 62  KKMNILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSL 121

Query: 97  AAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ--PQ 154
           A A      +L T           +  S I L +     ++  SS++ ++  A  +  P 
Sbjct: 122 ANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSIISLTYHASQKVVPG 181

Query: 155 SSMAMYGVTKTALLGLTKALAAEMAPDT--RVNCVAPGFVPT 194
               M    K AL   T+ LA  +  +   R+N ++ G + +
Sbjct: 182 YGGGM-SSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKS 222

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} Length = 319

 Score = 52.5 bits (126), Expect = 2e-08
 Identities = 54/241 (22%), Positives = 85/241 (35%), Gaps = 53/241 (21%)

Query: 6   MAKRFQGKVAIVT--ASTQGIGFGIAERLGLEGASVVVS--------------------- 42
           +    +GK A V   A + G G+ I + L   GA V+V                      
Sbjct: 3   LPVDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQD 62

Query: 43  ----------------SRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTI-- 84
                            +    V + +  L A       V   VS+ ++   +   TI  
Sbjct: 63  SFYAQEPSSKVAAEAAEKPVDLVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISE 122

Query: 85  ------EKFGKIDVVVSNAAANPSVD-SILQTKESVLDKLWDINVKSSILLLQDAAPHLQ 137
                    G+ID++V + A  P V   +LQT           +  S + LLQ   P ++
Sbjct: 123 VAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSYSFVSLLQHFLPLMK 182

Query: 138 KGSSVVLISSIAGYQ--PQSSMAMYGVTKTALLGLTKALAAEMAPD--TRVNCVAPGFVP 193
           +G S + +S IA  +  P     M    K AL    + LA E       RVNC++ G + 
Sbjct: 183 EGGSALALSYIASEKVIPGYGGGM-SSAKAALESDCRTLAFEAGRARAVRVNCISAGPLK 241

Query: 194 T 194
           +
Sbjct: 242 S 242

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score = 49.2 bits (118), Expect = 3e-07
 Identities = 41/208 (19%), Positives = 67/208 (32%), Gaps = 46/208 (22%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
            +  ++T +  G+G   A  L   GA+V+++ R  +  + A   +     +V      + 
Sbjct: 16  QRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAG---QVEVRELDLQ 72

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAA--ANP---SVDSI-LQTKESVLDKLWDINVKSS 125
           +       + +  +     DV+++NA   A P   +VD    Q            N    
Sbjct: 73  DLSS----VRRFADGVSGADVLINNAGIMAVPYALTVDGFESQ---------IGTNHLGH 119

Query: 126 ILLLQDAAPHLQKGSSVVLISSIA----------------GYQPQSSMAMYGVTKTALLG 169
             L     P L     VV +SS+A                 Y P      Y  +K A L 
Sbjct: 120 FALTNLLLPRLT--DRVVTVSSMAHWPGRINLEDLNWRSRRYSP---WLAYSQSKLANLL 174

Query: 170 LTKALA---AEMAPDTRVNCVAPGFVPT 194
            T  L           R     PG+  T
Sbjct: 175 FTSELQRRLTAAGSPLRALAAHPGYSHT 202

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688

 Score = 45.3 bits (107), Expect = 8e-06
 Identities = 40/218 (18%), Positives = 70/218 (32%), Gaps = 70/218 (32%)

Query: 9   RFQGKVAIVT-ASTQGIGFGIAERLGLEGASVVV-SSRKQKNVDEAVVKLKARGIEVIGV 66
            F+ K  ++T A    IG  + + L   GA VVV +SR      + V     + I     
Sbjct: 473 TFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSR----FSKQVTDY-YQSI----- 522

Query: 67  VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQ---TKESVLDKLWDINVK 123
             +   G +   LI           VV  N  +   V+++++     E      WD++  
Sbjct: 523 --YAKYGAKGSTLI-----------VVPFNQGSKQDVEALIEFIYDTEKNGGLGWDLD-- 567

Query: 124 SSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAM----YGVTKTALLGLTKALAAEMA 179
               ++  AA   Q          +     +S  A       + +  ++G  K   +   
Sbjct: 568 ---AIIPFAAIPEQGI-------ELEHIDSKSEFAHRIMLTNILR--MMGCVKKQKSARG 615

Query: 180 PDTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSP 217
            +TR         P            V+     L +SP
Sbjct: 616 IETR---------PAQ----------VI-----LPMSP 629

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357

 Score = 43.4 bits (103), Expect = 2e-05
 Identities = 25/130 (19%), Positives = 48/130 (36%), Gaps = 23/130 (17%)

Query: 55  KLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF---GKIDVVVSNAAANPSVDSIL---- 107
            L  +GI  I VV ++ +G +  NL++  I  +       + +        V++I     
Sbjct: 65  ALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGA 124

Query: 108 --QTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY-----------QPQ 154
              T E     + D N + S  LL       ++    +  SS A Y           + +
Sbjct: 125 CSSTTEWDGKYMMDNNYQYSKELLHYCL---EREIPFLYASSAATYGGRTSDFIESREYE 181

Query: 155 SSMAMYGVTK 164
             + ++G +K
Sbjct: 182 KPLNVFGYSK 191

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 Length = 310

 Score = 39.9 bits (94), Expect = 3e-04
 Identities = 28/137 (20%), Positives = 49/137 (35%), Gaps = 37/137 (27%)

Query: 55  KLKARGIEVIGVVCHVSNGQQRKNLINQTI----------------EKFGKIDVVVSNAA 98
            L  +GI  I VV ++ +G +  NL++  I                E+FG ++ +    A
Sbjct: 18  ALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGA 77

Query: 99  ANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY------- 151
                     T E     + D N + S  LL       ++    +  SS A Y       
Sbjct: 78  -------CSSTTEWDGKYMMDNNYQYSKELLHYCL---EREIPFLYASSAATYGGRTSDF 127

Query: 152 ----QPQSSMAMYGVTK 164
               + +  + +YG +K
Sbjct: 128 IESREYEKPLNVYGYSK 144

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	226
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	100.0
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	100.0
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	100.0
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	100.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	100.0
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	100.0
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	100.0
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	100.0
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	100.0
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	100.0
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	100.0
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	100.0
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	100.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	100.0
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	100.0
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	100.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	100.0
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	100.0
3rih_A	293	Short chain dehydrogenase or reductase; structural	100.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	100.0
3imf_A	257	Short chain dehydrogenase; structural genomics, in	100.0
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	100.0
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	100.0
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	100.0
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	100.0
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	100.0
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	100.0
4dqx_A	277	Probable oxidoreductase protein; structural genomi	100.0
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	100.0
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	100.0
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	100.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	100.0
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	100.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	100.0
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	100.0
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	100.0
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	100.0
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	100.0
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	100.0
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	100.0
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	100.0
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	100.0
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	100.0
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	100.0
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	100.0
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
3cxt_A	291	Dehydrogenase with different specificities; rossma	100.0
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	100.0
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	100.0
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	100.0
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	100.0
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	100.0
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	100.0
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	100.0
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	100.0
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	100.0
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	100.0
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	100.0
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	100.0
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	100.0
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	100.0
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	100.0
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	100.0
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	100.0
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	100.0
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	100.0
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	100.0
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	100.0
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	100.0
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	100.0
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
1xhl_A	297	Short-chain dehydrogenase/reductase family member	100.0
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
1xkq_A	280	Short-chain reductase family member (5D234); parra	100.0
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	100.0
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	100.0
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	100.0
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	100.0
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	100.0
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	100.0
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	100.0
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	100.0
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	100.0
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	100.0
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	100.0
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	100.0
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	100.0
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	100.0
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	100.0
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	100.0
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	100.0
1spx_A	278	Short-chain reductase family member (5L265); paral	100.0
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	100.0
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	100.0
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	100.0
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	100.0
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	100.0
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	100.0
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	100.0
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	100.0
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	100.0
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	100.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	100.0
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	100.0
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	100.0
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	100.0
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	100.0
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	100.0
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	100.0
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	100.0
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	100.0
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	100.0
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	100.0
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	100.0
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	100.0
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	100.0
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	100.0
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	100.0
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	100.0
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	100.0
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	100.0
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	100.0
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	100.0
1xq1_A	266	Putative tropinone reducatse; structural genomics,	100.0
4e4y_A	244	Short chain dehydrogenase family protein; structur	100.0
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	100.0
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	100.0
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	100.0
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	100.0
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	100.0
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	100.0
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	100.0
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	100.0
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	100.0
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	100.0
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	100.0
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	100.0
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	100.0
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	100.0
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	100.0
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	100.0
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	100.0
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	100.0
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	100.0
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	100.0
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	100.0
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	100.0
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	100.0
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	100.0
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	100.0
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	100.0
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	100.0
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	100.0
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	100.0
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	100.0
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	100.0
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	100.0
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	100.0
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	100.0
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	100.0
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	100.0
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	100.0
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	100.0
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	100.0
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	100.0
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	100.0
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	100.0
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	100.0
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	100.0
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	100.0
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	100.0
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	100.0
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	100.0
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	100.0
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	100.0
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	100.0
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	100.0
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	100.0
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	100.0
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	100.0
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	100.0
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	100.0
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	100.0
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	100.0
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.98
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.97
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.97
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.97
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.97
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.97
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.95
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.94
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.94
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.93
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.93
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.93
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.93
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.92
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.92
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.92
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.92
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.92
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.91
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.91
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.91
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.91
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.9
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.9
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.9
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.9
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.9
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.9
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.9
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.9
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.89
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.89
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.89
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.89
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.89
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.88
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.88
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.88
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.88
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.88
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.88
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.88
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.87
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.87
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.87
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.87
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.87
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.87
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.87
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.87
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.87
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.86
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.86
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.86
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.86
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.86
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.86
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.85
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.85
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.85
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.85
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.85
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.84
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.84
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.84
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.84
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.84
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.83
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.83
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.83
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.82
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.82
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.81
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.81
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.8
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.78
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.78
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.78
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.78
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.77
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.75
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.75
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.74
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.73
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.72
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.68
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.67
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.67
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.66
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.62
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.62
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.61
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.6
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.59
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.58
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.55
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.54
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.39
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.29
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	99.21
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	99.09
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.0
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.96
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.96
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.89
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.89
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	98.88
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.88
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.85
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.76
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.75
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.75
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.7
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.68
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.68
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.66
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.66
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.6
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.59
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	98.58
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.55
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.55
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	98.53
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	98.53
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	98.5
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.48
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	98.48
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	98.47
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	98.44
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.44
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.43
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	98.42
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.41
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	98.41
3gms_A	340	Putative NADPH:quinone reductase; structural genom	98.41
4eye_A	342	Probable oxidoreductase; structural genomics, niai	98.39
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	98.37
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	98.35
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	98.34
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	98.32
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	98.3
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	98.27
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	98.27
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	98.26
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	98.22
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	98.2
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	98.13
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	98.12
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	98.09
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.08
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.07
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.04
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	98.04
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	98.03
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	98.03
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	98.01
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.98
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.94
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	97.94
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.92
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.92
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.92
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.88
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	97.88
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.87
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	97.86
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.86
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.85
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.85
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	97.83
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.83
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	97.82
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.77
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	97.75
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.73
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	97.73
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	97.73
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	97.72
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	97.72
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	97.71
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	97.71
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	97.71
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.71
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	97.69
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	97.66
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	97.64
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.63
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	97.63
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	97.62
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	97.59
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.59
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	97.57
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.56
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	97.56
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	97.55
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	97.5
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	97.5
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	97.5
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	97.44
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	97.42
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.39
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	97.38
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	97.38
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	97.34
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	97.33
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	97.33
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	97.32
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	97.32
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	97.32
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.31
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	97.28
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	97.28
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.23
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	97.22
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	97.18
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	97.17
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	97.11
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	97.11
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	97.09
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	97.05
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	97.02
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	97.02
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	97.02
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	97.01
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	97.01
3tl2_A	315	Malate dehydrogenase; center for structural genomi	97.0
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	96.97
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	96.97
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	96.97
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	96.94
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	96.9
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	96.89
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	96.89
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	96.86
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	96.84
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	96.82
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	96.78
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	96.78
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	96.77
1pjz_A	203	Thiopurine S-methyltransferase; polymorphism, S-ad	96.76
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	96.75
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	96.74
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.74
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	96.71
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	96.7
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	96.68
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	96.66
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.65
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	96.62
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	96.62
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	96.62
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	96.6
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	96.59
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	96.58
2gb4_A	252	Thiopurine S-methyltransferase; 18204406, thiopuri	96.57
1lnq_A	336	MTHK channels, potassium channel related protein;	96.55
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	96.55
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.53
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	96.53
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	96.53
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	96.5
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	96.5
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	96.49
4g65_A	461	TRK system potassium uptake protein TRKA; structur	96.48
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	96.46
3qha_A	296	Putative oxidoreductase; seattle structural genomi	96.45
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	96.44
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	96.43
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	96.38
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	96.38
3gvx_A	290	Glycerate dehydrogenase related protein; NYSGXRC,	96.37
3l07_A	285	Bifunctional protein fold; structural genomics, ID	96.36
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	96.35
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	96.34
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	96.33
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	96.33
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	96.31
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	96.3
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	96.27
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	96.26
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	96.24
2l82_A	162	Designed protein OR32; structural genomics, northe	96.24

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=3.4e-54  Score=346.58  Aligned_cols=217  Identities=27%  Similarity=0.407  Sum_probs=200.0

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      +++||+++||||++|||+++++.|+++|++|++++|+++++++..+++.+.+.++.++++|++++++++++++++.+++|
T Consensus         4 sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G   83 (254)
T 4fn4_A            4 SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYS   83 (254)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            78999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa  166 (226)
                      ++|+||||||+.....++.+.+.++|++++++|+.|+|+++|+++|+|++  .|+||++||.++..+.++..+|++||+|
T Consensus        84 ~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~~~~~Y~asKaa  163 (254)
T 4fn4_A           84 RIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHG  163 (254)
T ss_dssp             CCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSSSCHHHHHHHHH
T ss_pred             CCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCCCChHHHHHHHH
Confidence            99999999998765678999999999999999999999999999999954  6899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchh-----h-hhhccCCCCCchhhhccc
Q 027248          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGV-----V-SSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       167 ~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~-----~-~~~~~~~~~~p~~~a~av  225 (226)
                      +.+|+|+|+.|+++ |||||+|+||+++|||......+...     . ...+..++..|+|+|.++
T Consensus       164 l~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~R~g~pediA~~v  229 (254)
T 4fn4_A          164 LIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVI  229 (254)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTTCCCCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCCCCCCCcCHHHHHHHH
Confidence            99999999999999 99999999999999998766554332     1 122457899999999875

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=3.2e-54  Score=346.91  Aligned_cols=218  Identities=25%  Similarity=0.372  Sum_probs=204.1

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      .++|+||+++||||++|||+++++.|+++|++|++++|+++++++..+++.+.+.++..+++|++++++++++++++.++
T Consensus         4 ~f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (255)
T 4g81_D            4 LFDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAE   83 (255)
T ss_dssp             TTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHT
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            35899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhh---cCCEEEEEeccCCcCCCCCCchhhHh
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ---KGSSVVLISSIAGYQPQSSMAMYGVT  163 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~---~~~~iv~~sS~~~~~~~~~~~~Y~~s  163 (226)
                      +|++|+||||||+.. ..++.+.+.++|++++++|+.|+|+++|+++|+|.   ++|+||++||..+..+.|+..+|++|
T Consensus        84 ~G~iDiLVNNAG~~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~~~~Y~as  162 (255)
T 4g81_D           84 GIHVDILINNAGIQY-RKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAA  162 (255)
T ss_dssp             TCCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTTCHHHHHH
T ss_pred             CCCCcEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCCchhHHHH
Confidence            999999999999976 68999999999999999999999999999999993   24799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch----hhhhhccCCCCCchhhhccc
Q 027248          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG----VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       164 Kaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~----~~~~~~~~~~~~p~~~a~av  225 (226)
                      |+|+.+|+|+|+.|+++ |||||+|+||+++|||.+....++.    +....+.+++.+|+|+|.++
T Consensus       163 Kaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v  229 (255)
T 4g81_D          163 KGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQRWGRPEELIGTA  229 (255)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCHHHHHHHHHHSTTCSCBCGGGGHHHH
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCHHHHHHHHhCCCCCCCcCHHHHHHHH
Confidence            99999999999999999 9999999999999999988766544    34566788999999999875

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=2.6e-53  Score=344.59  Aligned_cols=217  Identities=27%  Similarity=0.441  Sum_probs=192.3

Q ss_pred             ccccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHH
Q 027248            5 KMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTI   84 (226)
Q Consensus         5 ~~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (226)
                      +|...|+||++|||||++|||+++++.|+++|++|++++|+++++++..+++   +.++..+++|++++++++++++++.
T Consensus        22 ~Ms~rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~---g~~~~~~~~Dv~~~~~v~~~~~~~~   98 (273)
T 4fgs_A           22 SMTQRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI---GGGAVGIQADSANLAELDRLYEKVK   98 (273)
T ss_dssp             ---CTTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHHHH
T ss_pred             hhcchhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---CCCeEEEEecCCCHHHHHHHHHHHH
Confidence            3455699999999999999999999999999999999999999988887776   5678899999999999999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHhH
Q 027248           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTK  164 (226)
Q Consensus        85 ~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  164 (226)
                      +++|++|+||||||+.. ..++.+.+.++|++++++|+.|+|+++|+++|+|+++|+||++||..+..+.|+.++|++||
T Consensus        99 ~~~G~iDiLVNNAG~~~-~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~~~~~~Y~asK  177 (273)
T 4fgs_A           99 AEAGRIDVLFVNAGGGS-MLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGTPAFSVYAASK  177 (273)
T ss_dssp             HHHSCEEEEEECCCCCC-CCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCCTTCHHHHHHH
T ss_pred             HHcCCCCEEEECCCCCC-CCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCCCCchHHHHHH
Confidence            99999999999999876 68999999999999999999999999999999999889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCc---------hhhhhhccCCCCCchhhhccc
Q 027248          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND---------GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       165 aa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~---------~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +|+.+|+|+|+.|+++ |||||+|+||+++||+........         .+...++.+++..|+|+|.++
T Consensus       178 aav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v  248 (273)
T 4fgs_A          178 AALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEEVAAAA  248 (273)
T ss_dssp             HHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            9999999999999999 999999999999999987765432         234567888999999999875

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=1.8e-51  Score=331.91  Aligned_cols=217  Identities=26%  Similarity=0.301  Sum_probs=189.7

Q ss_pred             cccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus         6 ~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      |+++++||+++||||++|||+++++.|+++|++|++++|+++..+ ..+++.+.+.++.++.+|++++++++++++++.+
T Consensus         1 M~~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~-~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~   79 (258)
T 4gkb_A            1 MDLNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGA-FLDALAQRQPRATYLPVELQDDAQCRDAVAQTIA   79 (258)
T ss_dssp             CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHH-HHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHH-HHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHH
Confidence            567899999999999999999999999999999999999988754 4566777788899999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc-CCEEEEEeccCCcCCCCCCchhhHhH
Q 027248           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-GSSVVLISSIAGYQPQSSMAMYGVTK  164 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK  164 (226)
                      ++|++|+||||||+..  ....+.+.++|++++++|+.++|+++|+++|+|++ +|+||++||..+..+.++..+|++||
T Consensus        80 ~~G~iDiLVNnAGi~~--~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~~~~~Y~asK  157 (258)
T 4gkb_A           80 TFGRLDGLVNNAGVND--GIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVTGQGNTSGYCASK  157 (258)
T ss_dssp             HHSCCCEEEECCCCCC--CCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHHCCSSCHHHHHHH
T ss_pred             HhCCCCEEEECCCCCC--CCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhccCCCCchHHHHHH
Confidence            9999999999999864  33457899999999999999999999999999964 69999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCc--------hhhhhhcc-CCCCCchhhhccc
Q 027248          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND--------GVVSSVSS-LKLSPPSSLTLAV  225 (226)
Q Consensus       165 aa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~--------~~~~~~~~-~~~~~p~~~a~av  225 (226)
                      +|+.+|+|+|+.|+++ |||||+|+||+|+|||.+.+....        .+...++. .++.+|+|+|.++
T Consensus       158 aav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg~R~g~peeiA~~v  228 (258)
T 4gkb_A          158 GAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPDEIADTA  228 (258)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTTTTSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCCCCCCcCHHHHHHHH
Confidence            9999999999999999 999999999999999987754321        12334444 4789999999875

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=2e-51  Score=328.02  Aligned_cols=212  Identities=25%  Similarity=0.353  Sum_probs=191.9

Q ss_pred             cccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus         6 ~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      ..++|+||+++||||++|||+++++.|+++|++|++++|+.+  ++..+++.+.+.++..+.+|++++++++.+++    
T Consensus         3 n~f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~----   76 (247)
T 4hp8_A            3 NPFSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKDGGNASALLIDFADPLAAKDSFT----   76 (247)
T ss_dssp             CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHTTCCEEEEECCTTSTTTTTTSST----
T ss_pred             CCcCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHhCCcEEEEEccCCCHHHHHHHHH----
Confidence            346899999999999999999999999999999999999865  46677788888899999999999999887664    


Q ss_pred             HhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc---CCEEEEEeccCCcCCCCCCchhhH
Q 027248           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGV  162 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~---~~~iv~~sS~~~~~~~~~~~~Y~~  162 (226)
                       ++++|+||||||+.. ..++.+.+.++|++++++|+.|+|+++|+++|+|.+   .|+||++||..+..+.++.++|++
T Consensus        77 -~g~iDiLVNNAGi~~-~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~~~~Y~a  154 (247)
T 4hp8_A           77 -DAGFDILVNNAGIIR-RADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTA  154 (247)
T ss_dssp             -TTCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSSCHHHHH
T ss_pred             -hCCCCEEEECCCCCC-CCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCCChHHHH
Confidence             589999999999986 688999999999999999999999999999999842   589999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch----hhhhhccCCCCCchhhhccc
Q 027248          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG----VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       163 sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~----~~~~~~~~~~~~p~~~a~av  225 (226)
                      ||+|+.+|+|+|+.|+++ |||||+|+||+++|||.+....+..    +...++.+++.+|+|+|.++
T Consensus       155 sKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v  222 (247)
T 4hp8_A          155 AKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAGRWGHSEDIAGAA  222 (247)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTTSSCBCTHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCCCCCcCHHHHHHHH
Confidence            999999999999999999 9999999999999999987765533    45667888999999999875

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=1.8e-50  Score=323.65  Aligned_cols=207  Identities=23%  Similarity=0.332  Sum_probs=187.9

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id   91 (226)
                      +|++|||||++|||+++++.|+++|++|++++|+++++++    +.+.+.++..+++|++++++++++++++.+++|++|
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~----~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iD   77 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSAD----FAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRID   77 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH----HHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH----HHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            4999999999999999999999999999999999866554    344466889999999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc-CCEEEEEeccCCcCCCCCCchhhHhHHHHHHH
Q 027248           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-GSSVVLISSIAGYQPQSSMAMYGVTKTALLGL  170 (226)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~-~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~  170 (226)
                      +||||||+.. ..++.+.+.++|++++++|+.|+|+++|++.|+|++ +|+||++||..+..+.|+..+|++||+|+.+|
T Consensus        78 iLVNNAG~~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~~~~~~~~Y~asKaal~~l  156 (247)
T 3ged_A           78 VLVNNACRGS-KGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQSEPDSEAYASAKGGIVAL  156 (247)
T ss_dssp             EEEECCCCCC-CCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred             EEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecccccCCCCCHHHHHHHHHHHHH
Confidence            9999999876 688999999999999999999999999999999954 69999999999999999999999999999999


Q ss_pred             HHHHHHHhCCCeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          171 TKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       171 ~~~la~e~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +|+|+.|++++||||+|+||+++|++.++..  +.....++.+++.+|+|+|.++
T Consensus       157 tk~lA~ela~~IrVN~I~PG~i~t~~~~~~~--~~~~~~~Pl~R~g~pediA~~v  209 (247)
T 3ged_A          157 THALAMSLGPDVLVNCIAPGWINVTEQQEFT--QEDCAAIPAGKVGTPKDISNMV  209 (247)
T ss_dssp             HHHHHHHHTTTSEEEEEEECSBCCCC---CC--HHHHHTSTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHCCCCEEEEEecCcCCCCCcHHHH--HHHHhcCCCCCCcCHHHHHHHH
Confidence            9999999999999999999999999987653  3455678889999999999875

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=2.1e-50  Score=321.51  Aligned_cols=203  Identities=24%  Similarity=0.372  Sum_probs=178.6

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      |+||+++||||++|||+++++.|+++|++|++++|+++.++.      ..+.++..+.+|++++++++++++    ++|+
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~------~~~~~~~~~~~Dv~~~~~v~~~~~----~~g~   78 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHA------PRHPRIRREELDITDSQRLQRLFE----ALPR   78 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTS------CCCTTEEEEECCTTCHHHHHHHHH----HCSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhh------hhcCCeEEEEecCCCHHHHHHHHH----hcCC
Confidence            799999999999999999999999999999999999887643      224578899999999999877664    5799


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc-CCEEEEEeccCCcCCCCCCchhhHhHHHHH
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-GSSVVLISSIAGYQPQSSMAMYGVTKTALL  168 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~-~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~  168 (226)
                      +|+||||||+.   .++.+.+.++|++++++|+.|+|+++|+++|+|++ +|+||++||..+..+.++.++|++||+|+.
T Consensus        79 iDiLVNNAGi~---~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~~~~~Y~asKaav~  155 (242)
T 4b79_A           79 LDVLVNNAGIS---RDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTFGSADRPAYSASKGAIV  155 (242)
T ss_dssp             CSEEEECCCCC---CGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTSCCSSCHHHHHHHHHHH
T ss_pred             CCEEEECCCCC---CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccCCCCCCHHHHHHHHHHH
Confidence            99999999984   46788999999999999999999999999999954 689999999999999999999999999999


Q ss_pred             HHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch----hhhhhccCCCCCchhhhccc
Q 027248          169 GLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG----VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       169 ~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~----~~~~~~~~~~~~p~~~a~av  225 (226)
                      +|+|+|+.|+++ |||||+|+||+++|||.+....+.+    +....+.+++.+|+|+|.++
T Consensus       156 ~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v  217 (242)
T 4b79_A          156 QLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLARWGEAPEVASAA  217 (242)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTTCSCBCHHHHHHHH
T ss_pred             HHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            999999999999 9999999999999999988766543    44567888999999999875

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=5.4e-49  Score=318.17  Aligned_cols=218  Identities=21%  Similarity=0.217  Sum_probs=198.3

Q ss_pred             cccCCCEEEEEcCCC--chhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcC-CcEEEEEeeCCCHHHHHHHHHHHH
Q 027248            8 KRFQGKVAIVTASTQ--GIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG-IEVIGVVCHVSNGQQRKNLINQTI   84 (226)
Q Consensus         8 ~~~~gk~vlItGa~~--giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~   84 (226)
                      ++++||++|||||+|  |||+++++.|+++|++|++++|+++.+++..+++.+.+ .++.++++|++++++++++++++.
T Consensus         2 ~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   81 (256)
T 4fs3_A            2 LNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIG   81 (256)
T ss_dssp             CCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            478999999999875  99999999999999999999999999998888887764 478899999999999999999999


Q ss_pred             HHhCCCCEEEEcCCCCCC---CCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhh
Q 027248           85 EKFGKIDVVVSNAAANPS---VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYG  161 (226)
Q Consensus        85 ~~~~~id~li~nag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~  161 (226)
                      +++|++|+||||||+...   ..++.+.+.++|..++++|+.+++.+++.+.|+++++|+||++||..+..+.++...|+
T Consensus        82 ~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~~~~~~~Y~  161 (256)
T 4fs3_A           82 KDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNVMG  161 (256)
T ss_dssp             HHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSCCTTTHHHH
T ss_pred             HHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccCcccchhhH
Confidence            999999999999998642   34567888999999999999999999999999999899999999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch----hhhhhccCCCCCchhhhccc
Q 027248          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG----VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       162 ~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~----~~~~~~~~~~~~p~~~a~av  225 (226)
                      +||+|+.+|+|+|+.|+++ |||||+|+||+++|++.+.....+.    +....+.+++.+|+|||.++
T Consensus       162 asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~peevA~~v  230 (256)
T 4fs3_A          162 VAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPLKRNVDQVEVGKTA  230 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            9999999999999999999 9999999999999999887654433    45666788999999999875

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=2.4e-49  Score=320.40  Aligned_cols=212  Identities=21%  Similarity=0.280  Sum_probs=184.9

Q ss_pred             ccccc-ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHH
Q 027248            4 MKMAK-RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQ   82 (226)
Q Consensus         4 ~~~~~-~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   82 (226)
                      |+|+. +++||++|||||++|||+++++.|+++|++|++++|++++.          ..+...+++|++++++++.++++
T Consensus         2 Mm~dl~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~~   71 (261)
T 4h15_A            2 MMIEFLNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG----------LPEELFVEADLTTKEGCAIVAEA   71 (261)
T ss_dssp             CCCCCCCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT----------SCTTTEEECCTTSHHHHHHHHHH
T ss_pred             cchhccCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC----------CCcEEEEEcCCCCHHHHHHHHHH
Confidence            66664 89999999999999999999999999999999999986531          22334788999999999999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCC-CCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCC-CCc
Q 027248           83 TIEKFGKIDVVVSNAAANPS-VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQS-SMA  158 (226)
Q Consensus        83 ~~~~~~~id~li~nag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~-~~~  158 (226)
                      +.+++|++|+||||||+... ..++.+.+.++|++++++|+.++++++|+++|+|++  +|+||++||..+..+.| +..
T Consensus        72 ~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~~~~~  151 (261)
T 4h15_A           72 TRQRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLPESTT  151 (261)
T ss_dssp             HHHHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTTCH
T ss_pred             HHHHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCCCccH
Confidence            99999999999999998642 457899999999999999999999999999999954  58999999999988876 688


Q ss_pred             hhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC----------------chhhhhhccCCCCCchhh
Q 027248          159 MYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN----------------DGVVSSVSSLKLSPPSSL  221 (226)
Q Consensus       159 ~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~----------------~~~~~~~~~~~~~~p~~~  221 (226)
                      +|++||+|+.+|+|+|+.|+++ |||||+|+||+++||+.......                ......++.+++.+|+||
T Consensus       152 ~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peev  231 (261)
T 4h15_A          152 AYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPLGRPAKPEEV  231 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTTSSCBCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCCCCCcCHHHH
Confidence            9999999999999999999999 99999999999999987654321                112344677889999999


Q ss_pred             hccc
Q 027248          222 TLAV  225 (226)
Q Consensus       222 a~av  225 (226)
                      |.++
T Consensus       232 A~~v  235 (261)
T 4h15_A          232 ANLI  235 (261)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9875

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=100.00  E-value=4.3e-46  Score=303.55  Aligned_cols=223  Identities=25%  Similarity=0.404  Sum_probs=198.6

Q ss_pred             cccccccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCc-chHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHH
Q 027248            2 EKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ-KNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLI   80 (226)
Q Consensus         2 ~~~~~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   80 (226)
                      ++|++..+++||++|||||++|||++++++|+++|++|++++++. +..+...+++.+.+.++.++.+|+++++++++++
T Consensus        21 ~~mm~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~  100 (271)
T 3v2g_A           21 QSMMTSISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAI  100 (271)
T ss_dssp             HHHHTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             hhhccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence            456666789999999999999999999999999999999986654 6677778888887888999999999999999999


Q ss_pred             HHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCC-CCCCch
Q 027248           81 NQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP-QSSMAM  159 (226)
Q Consensus        81 ~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~-~~~~~~  159 (226)
                      +++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|++.++||++||..+..+ .++...
T Consensus       101 ~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~  179 (271)
T 3v2g_A          101 RETVEALGGLDILVNSAGIWH-SAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVPWPGISL  179 (271)
T ss_dssp             HHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCCCSTTCHH
T ss_pred             HHHHHHcCCCcEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccCCCCCchH
Confidence            999999999999999999876 678899999999999999999999999999999988899999999877654 788999


Q ss_pred             hhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC-chhhhhhccCCCCCchhhhccc
Q 027248          160 YGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN-DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       160 Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      |++||+|+++|+++|+.|+++ ||+||+|+||+++|++....... .......+..++.+|+|+|+++
T Consensus       180 Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v  247 (271)
T 3v2g_A          180 YSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGDHAEAQRERIATGSYGEPQDIAGLV  247 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCSSHHHHHHTCTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccchhHHHHHhcCCCCCCCCHHHHHHHH
Confidence            999999999999999999998 99999999999999997653322 2244566777899999999875

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=2.4e-46  Score=303.89  Aligned_cols=220  Identities=22%  Similarity=0.399  Sum_probs=198.9

Q ss_pred             cccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus         6 ~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      |...++||+++||||++|||++++++|+++|++|++++|+.+++++..+++.+.+.++.++.+|++++++++++++++.+
T Consensus         5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   84 (264)
T 3ucx_A            5 MGGLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMK   84 (264)
T ss_dssp             --CTTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            55568999999999999999999999999999999999999999999999988888999999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc-CCEEEEEeccCCcCCCCCCchhhHhH
Q 027248           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-GSSVVLISSIAGYQPQSSMAMYGVTK  164 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK  164 (226)
                      +++++|+||||||......++.+.+.++|++++++|+.++++++++++|+|++ +++||++||..+..+.++...|++||
T Consensus        85 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  164 (264)
T 3ucx_A           85 AYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRHSQAKYGAYKMAK  164 (264)
T ss_dssp             HTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGGCCCTTCHHHHHHH
T ss_pred             HcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhccCCCccHHHHHHH
Confidence            99999999999998655678899999999999999999999999999999854 68999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC-------------chhhhhhccCCCCCchhhhccc
Q 027248          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN-------------DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       165 aa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~-------------~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +|+++|+++|+.|+++ ||+||+|+||+++|++.+.....             ..+....+..++.+|+|+|+++
T Consensus       165 aa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v  239 (264)
T 3ucx_A          165 SALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASAI  239 (264)
T ss_dssp             HHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSSSSSCCBHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCCcccCCCHHHHHHHH
Confidence            9999999999999988 99999999999999987665321             1123445667899999999875

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=2.5e-46  Score=302.51  Aligned_cols=218  Identities=32%  Similarity=0.481  Sum_probs=197.7

Q ss_pred             cccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus         6 ~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      +..+++||+++||||++|||++++++|+++|++|++++|+.++++...+++.+.+.++.++.+|++++++++++++++.+
T Consensus         6 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   85 (256)
T 3gaf_A            6 SPFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALD   85 (256)
T ss_dssp             CTTCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            45678999999999999999999999999999999999999999999999988888999999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHh
Q 027248           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVT  163 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~s  163 (226)
                      +++++|+||||||+.. ..++ +.+.++|++++++|+.|+++++++++|+|++  .++||++||..+..+.++...|++|
T Consensus        86 ~~g~id~lv~nAg~~~-~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  163 (256)
T 3gaf_A           86 QFGKITVLVNNAGGGG-PKPF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSS  163 (256)
T ss_dssp             HHSCCCEEEECCCCCC-CCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCTTCHHHHHH
T ss_pred             HcCCCCEEEECCCCCC-CCCC-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCCCchHHHHH
Confidence            9999999999999876 4556 8899999999999999999999999999965  4799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCc---hhhhhhccCCCCCchhhhccc
Q 027248          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND---GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       164 Kaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~p~~~a~av  225 (226)
                      |+|+++|+++|+.|+++ ||+||+|+||+++|++......+.   .+....+..++.+|+|+|+++
T Consensus       164 Kaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~  229 (256)
T 3gaf_A          164 KAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPEIERAMLKHTPLGRLGEAQDIANAA  229 (256)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCCHHHHHHHHTTCTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence            99999999999999998 999999999999999876654322   233455667889999999875

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=100.00  E-value=5.8e-46  Score=299.77  Aligned_cols=217  Identities=19%  Similarity=0.284  Sum_probs=179.5

Q ss_pred             cccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus         6 ~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      |.++++||+++||||++|||++++++|+++|++|++++|++++++...+++.+.+.++.++.+|++++++++++++++.+
T Consensus         1 M~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (252)
T 3h7a_A            1 MSLTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADA   80 (252)
T ss_dssp             ----CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHh
Confidence            44567899999999999999999999999999999999999999999999988888999999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHh
Q 027248           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVT  163 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~s  163 (226)
                      . +++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++  .++||++||..+..+.++...|++|
T Consensus        81 ~-g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  158 (252)
T 3h7a_A           81 H-APLEVTIFNVGANV-NFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASA  158 (252)
T ss_dssp             H-SCEEEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCTTCHHHHHH
T ss_pred             h-CCceEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCCCCccHHHH
Confidence            9 99999999999876 678889999999999999999999999999999954  5799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEE-EEEecCceeCCcccccccCc--hhhhhhccCCCCCchhhhccc
Q 027248          164 KTALLGLTKALAAEMAP-DTRV-NCVAPGFVPTHFAEYITSND--GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       164 Kaa~~~~~~~la~e~~~-~i~v-~~v~Pg~v~t~~~~~~~~~~--~~~~~~~~~~~~~p~~~a~av  225 (226)
                      |+|+++|+++|+.|+++ ||+| |+|+||+++|++.+......  .+....+.. +.+|+|+|+++
T Consensus       159 Kaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~-~~~pedvA~~~  223 (252)
T 3h7a_A          159 KFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERREQMFGKDALANPDL-LMPPAAVAGAY  223 (252)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEEC----------------------------CCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccchhhhhhhhhcCCcc-CCCHHHHHHHH
Confidence            99999999999999998 9999 99999999999987654322  122233344 89999999875

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=5.3e-46  Score=302.01  Aligned_cols=218  Identities=22%  Similarity=0.305  Sum_probs=194.9

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHh-cCC-cEEEEEeeCCCHHHHHHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA-RGI-EVIGVVCHVSNGQQRKNLINQTI   84 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-~~~-~~~~~~~Dv~~~~~v~~~~~~~~   84 (226)
                      .++++||+++||||++|||++++++|+++|++|++++|++++++...+++.. .+. ++.++.+|++++++++++++++.
T Consensus         3 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   82 (265)
T 3lf2_A            3 PYDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACE   82 (265)
T ss_dssp             CCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence            4568899999999999999999999999999999999999999988888876 333 48899999999999999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhH
Q 027248           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGV  162 (226)
Q Consensus        85 ~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~  162 (226)
                      +.++++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|+|++  .++||++||..+..+.++...|++
T Consensus        83 ~~~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  161 (265)
T 3lf2_A           83 RTLGCASILVNNAGQGR-VSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSA  161 (265)
T ss_dssp             HHHCSCSEEEECCCCCC-CBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCTTBHHHHH
T ss_pred             HHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCCCchhhHH
Confidence            99999999999999875 678889999999999999999999999999999965  479999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCc--------hhh---h---hhccCCCCCchhhhccc
Q 027248          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND--------GVV---S---SVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       163 sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~--------~~~---~---~~~~~~~~~p~~~a~av  225 (226)
                      ||+|+++|+++|+.|+++ ||+||+|+||+++|++........        .+.   .   ..+..++.+|+|+|+++
T Consensus       162 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v  239 (265)
T 3lf2_A          162 ARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAARAI  239 (265)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTTCSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCcCCCcCHHHHHHHH
Confidence            999999999999999998 999999999999999876654311        111   1   15677899999999875

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.1e-45  Score=302.85  Aligned_cols=219  Identities=26%  Similarity=0.373  Sum_probs=193.5

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      ++++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++...+.++.++.+|++++++++++++++.++
T Consensus        23 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  102 (283)
T 3v8b_A           23 MMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLK  102 (283)
T ss_dssp             ----CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             hcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999999999999998888888999999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcC--CCCCCchhhH
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQ--PQSSMAMYGV  162 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~--~~~~~~~Y~~  162 (226)
                      +|++|+||||||+.....++.+.+.++|++++++|+.|+++++++++|+|++  .++||++||..+..  +.++...|++
T Consensus       103 ~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~~~Y~a  182 (283)
T 3v8b_A          103 FGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTA  182 (283)
T ss_dssp             HSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCSTTCHHHHH
T ss_pred             hCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCCCCCchHHHH
Confidence            9999999999998754578899999999999999999999999999999954  57999999999877  7788999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch---------hhhhhcc--CCCCCchhhhccc
Q 027248          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG---------VVSSVSS--LKLSPPSSLTLAV  225 (226)
Q Consensus       163 sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~---------~~~~~~~--~~~~~p~~~a~av  225 (226)
                      ||+|+++|+++|+.|+++ ||+||+|+||+++|++.+.......         .....+.  .++..|+|+|+++
T Consensus       183 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~pedvA~~v  257 (283)
T 3v8b_A          183 TKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELI  257 (283)
T ss_dssp             HHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBCTTCSCGGGTTCCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchhhhhhhhhhhhcCccccCCCCCHHHHHHHH
Confidence            999999999999999998 9999999999999999876532221         1122233  6788999999875

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=100.00  E-value=4.1e-46  Score=301.13  Aligned_cols=214  Identities=27%  Similarity=0.411  Sum_probs=193.2

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      .+++||+++||||++|||++++++|+++|++|++++|+++++++..+++   +.++.++.+|++++++++++++++.+.+
T Consensus         4 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (255)
T 4eso_A            4 GNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF---GPRVHALRSDIADLNEIAVLGAAAGQTL   80 (255)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHHHh
Confidence            4689999999999999999999999999999999999998888777766   4578899999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHhHHHH
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~  167 (226)
                      +++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|+++++||++||..+..+.++...|++||+|+
T Consensus        81 g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~  159 (255)
T 4eso_A           81 GAIDLLHINAGVSE-LEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGHPGMSVYSASKAAL  159 (255)
T ss_dssp             SSEEEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBCTTBHHHHHHHHHH
T ss_pred             CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCCchHHHHHHHHH
Confidence            99999999999876 67889999999999999999999999999999998889999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch--------hhhhhccCCCCCchhhhccc
Q 027248          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG--------VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       168 ~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~--------~~~~~~~~~~~~p~~~a~av  225 (226)
                      ++|+++|+.|+++ ||+||+|+||+++|++.........        .....+.+++.+|+|+|+++
T Consensus       160 ~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v  226 (255)
T 4eso_A          160 VSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTADEVARAV  226 (255)
T ss_dssp             HHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCCCCCcCHHHHHHHH
Confidence            9999999999998 9999999999999998754322211        22345677889999999875

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=4.5e-46  Score=302.61  Aligned_cols=218  Identities=27%  Similarity=0.430  Sum_probs=198.2

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHh-cCCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA-RGIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      ..+++||+++||||++|||++++++|+++|++|++++|+.+++++..+++.+ .+.++.++.+|++++++++++++++.+
T Consensus        15 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   94 (266)
T 4egf_A           15 VLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAE   94 (266)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            3568999999999999999999999999999999999999999888888876 477899999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc---CCEEEEEeccCCcCCCCCCchhhH
Q 027248           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGV  162 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~---~~~iv~~sS~~~~~~~~~~~~Y~~  162 (226)
                      +++++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|+|++   .++||++||..+..+.++...|++
T Consensus        95 ~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  173 (266)
T 4egf_A           95 AFGGLDVLVNNAGISH-PQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCT  173 (266)
T ss_dssp             HHTSCSEEEEECCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             HcCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCCChHHHH
Confidence            9999999999999876 578889999999999999999999999999999964   469999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch----hhhhhccCCCCCchhhhccc
Q 027248          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG----VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       163 sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~----~~~~~~~~~~~~p~~~a~av  225 (226)
                      ||+|+++|+++|+.|+++ ||+||+|+||+++|++.+.......    +....+..++..|+|+|+++
T Consensus       174 sK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v  241 (266)
T 4egf_A          174 SKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPLGRFAVPHEVSDAV  241 (266)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHHTTCTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            999999999999999998 9999999999999999876654332    34455677889999999875

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=100.00  E-value=4.2e-46  Score=302.98  Aligned_cols=217  Identities=30%  Similarity=0.418  Sum_probs=186.6

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEE-ecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      +.++||++|||||++|||++++++|+++|++|+++ .|+.+..+...+++...+.++.++.+|++++++++++++++.+.
T Consensus        23 m~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  102 (267)
T 3u5t_A           23 MMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEA  102 (267)
T ss_dssp             ----CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            34679999999999999999999999999999887 55666777788888888888999999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHhHHH
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa  166 (226)
                      ++++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|+++++||++||..+..+.++...|++||+|
T Consensus       103 ~g~iD~lvnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  181 (267)
T 3u5t_A          103 FGGVDVLVNNAGIMP-LTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLHPSYGIYAAAKAG  181 (267)
T ss_dssp             HSCEEEEEECCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCCTTCHHHHHHHHH
T ss_pred             cCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCCCCchHHHHHHHH
Confidence            999999999999876 6788899999999999999999999999999999888999999999998899999999999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC---chhhhhhccCCCCCchhhhccc
Q 027248          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN---DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       167 ~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~---~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +++|+++|+.|+++ ||+||+|+||+++|++.......   ..+....+..++.+|+|+|+++
T Consensus       182 ~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v  244 (267)
T 3u5t_A          182 VEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDEVRDRFAKLAPLERLGTPQDIAGAV  244 (267)
T ss_dssp             HHHHHHHHHHHTTTSCCEEEEEEECCBC-----------CHHHHHTSSTTCSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            99999999999998 99999999999999997654332   2234455667889999999875

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=100.00  E-value=8.1e-46  Score=301.94  Aligned_cols=218  Identities=22%  Similarity=0.351  Sum_probs=199.9

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      ..+++||+++||||++|||++++++|+++|++|++++|+++++++..+++.+.+.++.++.+|++++++++++++++.++
T Consensus        21 ~~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  100 (271)
T 4ibo_A           21 IFDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQ  100 (271)
T ss_dssp             GGCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999999999999999888888999999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhH
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTK  164 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sK  164 (226)
                      ++++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++  .++||++||..+..+.++...|++||
T Consensus       101 ~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asK  179 (271)
T 4ibo_A          101 GIDVDILVNNAGIQF-RKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARATVAPYTVAK  179 (271)
T ss_dssp             TCCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHHH
T ss_pred             CCCCCEEEECCCCCC-CCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCCCchhHHHHH
Confidence            999999999999876 578889999999999999999999999999999854  47999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch----hhhhhccCCCCCchhhhccc
Q 027248          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG----VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       165 aa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~----~~~~~~~~~~~~p~~~a~av  225 (226)
                      +|+++|+++|+.|+++ ||+||+|+||+++|++.+.......    +....+..++.+|+|+|.++
T Consensus       180 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v  245 (271)
T 4ibo_A          180 GGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPAKRWGKPQELVGTA  245 (271)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHSTTCSCBCGGGGHHHH
T ss_pred             HHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            9999999999999998 9999999999999999876644322    33456677899999999875

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=100.00  E-value=6.4e-46  Score=298.80  Aligned_cols=214  Identities=26%  Similarity=0.433  Sum_probs=192.4

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      ++++||+++||||++|||++++++|+++|++|++++|++++++...+++..   +...+.+|++++++++++++++.+++
T Consensus         5 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~~~   81 (248)
T 3op4_A            5 MNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD---NGKGMALNVTNPESIEAVLKAITDEF   81 (248)
T ss_dssp             TCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGG---GEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc---cceEEEEeCCCHHHHHHHHHHHHHHc
Confidence            468899999999999999999999999999999999999888887777643   46788999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHH
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKT  165 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKa  165 (226)
                      |++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++  .++||++||..+..+.++...|++||+
T Consensus        82 g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  160 (248)
T 3op4_A           82 GGVDILVNNAGITR-DNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKA  160 (248)
T ss_dssp             CCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHH
T ss_pred             CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHHH
Confidence            99999999999876 578889999999999999999999999999999843  579999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC--chhhhhhccCCCCCchhhhccc
Q 027248          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN--DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       166 a~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      |+++|+++|+.|+++ ||+||+|+||+++|++.+.....  .......+..++.+|+|+|+++
T Consensus       161 a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v  223 (248)
T 3op4_A          161 GVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDEQRTATLAQVPAGRLGDPREIASAV  223 (248)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSCHHHHHHHHHTCTTCSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            999999999999998 99999999999999998765322  1233455677899999999875

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=100.00  E-value=1.8e-45  Score=300.63  Aligned_cols=218  Identities=27%  Similarity=0.417  Sum_probs=190.9

Q ss_pred             cccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEec-------------CcchHHHHHHHHHhcCCcEEEEEeeCCC
Q 027248            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSR-------------KQKNVDEAVVKLKARGIEVIGVVCHVSN   72 (226)
Q Consensus         6 ~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r-------------~~~~~~~~~~~~~~~~~~~~~~~~Dv~~   72 (226)
                      |..+++||+++||||++|||++++++|+++|++|++++|             +.+.+++..+++...+.++.++.+|+++
T Consensus         5 m~~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   84 (277)
T 3tsc_A            5 MAGKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRD   84 (277)
T ss_dssp             --CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred             cccccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCC
Confidence            455789999999999999999999999999999999998             5666777777777778889999999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc---CCEEEEEeccC
Q 027248           73 GQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIA  149 (226)
Q Consensus        73 ~~~v~~~~~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~---~~~iv~~sS~~  149 (226)
                      +++++++++++.++++++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++   .++||++||..
T Consensus        85 ~~~v~~~~~~~~~~~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~  163 (277)
T 3tsc_A           85 FDRLRKVVDDGVAALGRLDIIVANAGVAA-PQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAA  163 (277)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGG
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHh
Confidence            99999999999999999999999999886 578889999999999999999999999999999854   47999999999


Q ss_pred             CcCCCCCCchhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccc---------cCch----hhhhhccCCC
Q 027248          150 GYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYIT---------SNDG----VVSSVSSLKL  215 (226)
Q Consensus       150 ~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~---------~~~~----~~~~~~~~~~  215 (226)
                      +..+.++...|++||+|+++|+++|+.|+++ ||+||+|+||+++|++.....         ....    +....+ .++
T Consensus       164 ~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~r~  242 (277)
T 3tsc_A          164 GMKMQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLP-DWV  242 (277)
T ss_dssp             GTSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGGGTTTTCCSSS-CSC
T ss_pred             hCCCCCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHHHHHHhhhccC-CCC
Confidence            9999999999999999999999999999998 999999999999999875411         1111    112222 268


Q ss_pred             CCchhhhccc
Q 027248          216 SPPSSLTLAV  225 (226)
Q Consensus       216 ~~p~~~a~av  225 (226)
                      .+|+|+|+++
T Consensus       243 ~~pedvA~~v  252 (277)
T 3tsc_A          243 AEPEDIADTV  252 (277)
T ss_dssp             BCHHHHHHHH
T ss_pred             CCHHHHHHHH
Confidence            8999999875

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=1.2e-45  Score=299.39  Aligned_cols=217  Identities=32%  Similarity=0.448  Sum_probs=195.8

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcC-CcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG-IEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      .+++||+++||||++|||++++++|+++|++|++++|++++++...+++.+.+ .++.++.+|++++++++++++++.++
T Consensus         6 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   85 (262)
T 3pk0_A            6 FDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEE   85 (262)
T ss_dssp             TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999999999999888888766 57899999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCc-CCCCCCchhhHh
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGY-QPQSSMAMYGVT  163 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~-~~~~~~~~Y~~s  163 (226)
                      ++++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++  .++||++||..+. .+.++...|++|
T Consensus        86 ~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~as  164 (262)
T 3pk0_A           86 FGGIDVVCANAGVFP-DAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGAT  164 (262)
T ss_dssp             HSCCSEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCCTTCHHHHHH
T ss_pred             hCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCCChhhHHH
Confidence            999999999999876 578889999999999999999999999999999953  5899999999986 788999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC--chhhhhhccCCCCCchhhhccc
Q 027248          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN--DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       164 Kaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      |+|+++|+++|+.|+++ ||+||+|+||+++|++.......  ..+....+..++.+|+|+|+++
T Consensus       165 K~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v  229 (262)
T 3pk0_A          165 KAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENGEEYIASMARSIPAGALGTPEDIGHLA  229 (262)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTCHHHHHHHHTTSTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            99999999999999998 99999999999999987553221  2234556677899999999875

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=100.00  E-value=1.5e-45  Score=302.35  Aligned_cols=220  Identities=26%  Similarity=0.420  Sum_probs=191.7

Q ss_pred             ccccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecC----------------cchHHHHHHHHHhcCCcEEEEEe
Q 027248            5 KMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRK----------------QKNVDEAVVKLKARGIEVIGVVC   68 (226)
Q Consensus         5 ~~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~----------------~~~~~~~~~~~~~~~~~~~~~~~   68 (226)
                      .|+.+++||+++||||++|||++++++|+++|++|++++|+                .+++++..+++...+.++.++.+
T Consensus         4 ~m~~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (286)
T 3uve_A            4 SMTGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEV   83 (286)
T ss_dssp             --CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEEC
T ss_pred             CCCcccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEc
Confidence            35567899999999999999999999999999999999987                55666777777777788999999


Q ss_pred             eCCCHHHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc---CCEEEEE
Q 027248           69 HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLI  145 (226)
Q Consensus        69 Dv~~~~~v~~~~~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~---~~~iv~~  145 (226)
                      |++++++++++++++.+++|++|+||||||+.....++.+.+.++|++++++|+.|+++++++++|+|++   .++||++
T Consensus        84 Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~i  163 (286)
T 3uve_A           84 DVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILT  163 (286)
T ss_dssp             CTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEE
T ss_pred             CCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEE
Confidence            9999999999999999999999999999998764445889999999999999999999999999999954   4799999


Q ss_pred             eccCCcCCCCCCchhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCccccccc---------Cch---------h
Q 027248          146 SSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS---------NDG---------V  206 (226)
Q Consensus       146 sS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~---------~~~---------~  206 (226)
                      ||..+..+.++...|++||+|+++|+++|+.|+++ ||+||+|+||+++|++.+....         ...         .
T Consensus       164 sS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (286)
T 3uve_A          164 SSVGGLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQM  243 (286)
T ss_dssp             CCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHT
T ss_pred             CchhhccCCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccccccchhhHHHHHHh
Confidence            99999999999999999999999999999999998 9999999999999998753110         000         1


Q ss_pred             hhhhccCCCCCchhhhccc
Q 027248          207 VSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       207 ~~~~~~~~~~~p~~~a~av  225 (226)
                      ...++ .++..|+|+|+++
T Consensus       244 ~~~~p-~r~~~p~dvA~~v  261 (286)
T 3uve_A          244 FHTLP-IPWVEPIDISNAV  261 (286)
T ss_dssp             TCSSS-CSCBCHHHHHHHH
T ss_pred             hhccC-CCcCCHHHHHHHH
Confidence            22233 6788999999875

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=100.00  E-value=1e-45  Score=301.01  Aligned_cols=219  Identities=28%  Similarity=0.426  Sum_probs=197.0

Q ss_pred             ccccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEec-CcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHH
Q 027248            5 KMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSR-KQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQT   83 (226)
Q Consensus         5 ~~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   83 (226)
                      |+..+++||+++||||++|||++++++|+++|++|++++| +.+..+...+++...+.++.++.+|++++++++++++++
T Consensus        21 m~~~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~  100 (269)
T 4dmm_A           21 MTALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAV  100 (269)
T ss_dssp             ---CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence            3446789999999999999999999999999999999988 566777778888887888999999999999999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhh
Q 027248           84 IEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYG  161 (226)
Q Consensus        84 ~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~  161 (226)
                      .+++|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++  .++||++||..+..+.++...|+
T Consensus       101 ~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  179 (269)
T 4dmm_A          101 IERWGRLDVLVNNAGITR-DTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYS  179 (269)
T ss_dssp             HHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCTTCHHHH
T ss_pred             HHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCchhHH
Confidence            999999999999999876 577889999999999999999999999999999854  58999999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       162 ~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +||+|+++|+++|+.|+++ ||+||+|+||+++|++...... ..+....+..++..|+|+|+++
T Consensus       180 asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-~~~~~~~p~~r~~~~~dvA~~v  243 (269)
T 4dmm_A          180 AAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSELAA-EKLLEVIPLGRYGEAAEVAGVV  243 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHHHH-HHHGGGCTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccccH-HHHHhcCCCCCCCCHHHHHHHH
Confidence            9999999999999999988 9999999999999999876543 3455666778899999999875

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=100.00  E-value=1.5e-45  Score=301.63  Aligned_cols=221  Identities=27%  Similarity=0.363  Sum_probs=197.2

Q ss_pred             ccccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCC---cEEEEEeeCCCHHHHHHHHH
Q 027248            5 KMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI---EVIGVVCHVSNGQQRKNLIN   81 (226)
Q Consensus         5 ~~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~Dv~~~~~v~~~~~   81 (226)
                      .|..+++||+++||||++|||++++++|+++|++|++++|++++++...+++.+.+.   ++.++.+|++++++++++++
T Consensus         4 ~m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   83 (281)
T 3svt_A            4 SMQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVD   83 (281)
T ss_dssp             ----CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHH
T ss_pred             CCccCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHH
Confidence            356678999999999999999999999999999999999999999999888887655   78899999999999999999


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCch
Q 027248           82 QTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAM  159 (226)
Q Consensus        82 ~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~  159 (226)
                      ++.+++|++|+||||||+.....++.+.+.++|++++++|+.|+++++++++|+|.+  .++||++||..+..+.++...
T Consensus        84 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  163 (281)
T 3svt_A           84 AVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGA  163 (281)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTCTH
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCCCChh
Confidence            999999999999999998554678899999999999999999999999999999954  479999999999999999999


Q ss_pred             hhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch----hhhhhccCCCCCchhhhccc
Q 027248          160 YGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG----VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       160 Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~----~~~~~~~~~~~~p~~~a~av  225 (226)
                      |++||+|+++|+++|+.|+++ ||+||+|+||+++|++.+.......    +....+..++..|+|+|+++
T Consensus       164 Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~  234 (281)
T 3svt_A          164 YGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLPRQGEVEDVANMA  234 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCSSSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence            999999999999999999988 9999999999999999876544332    33445677889999999875

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.4e-45  Score=301.91  Aligned_cols=218  Identities=27%  Similarity=0.372  Sum_probs=196.0

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      .+++||++|||||++|||++++++|+++|++|++++|+++++++..+++...+.++.++.+|++++++++.+++++.+++
T Consensus         4 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (280)
T 3tox_A            4 SRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRF   83 (280)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            46889999999999999999999999999999999999999999999888778889999999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCc-CCCCCCchhhHhH
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGY-QPQSSMAMYGVTK  164 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~-~~~~~~~~Y~~sK  164 (226)
                      +++|+||||||+.....++.+.+.++|++++++|+.|+++++++++|+|++  .++||++||..+. .+.++...|++||
T Consensus        84 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK  163 (280)
T 3tox_A           84 GGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASK  163 (280)
T ss_dssp             SCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCCTTCHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCCCCchhHHHHH
Confidence            999999999998754678899999999999999999999999999999965  5799999999987 6788999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCceeCCccccccc--Cch----hhhhhccCCCCCchhhhccc
Q 027248          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS--NDG----VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       165 aa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~--~~~----~~~~~~~~~~~~p~~~a~av  225 (226)
                      +|+++|+++|+.|+++ ||+||+|+||+++|++......  ...    +....+..++.+|+|+|+++
T Consensus       164 aa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v  231 (280)
T 3tox_A          164 AGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIARPEEIAEAA  231 (280)
T ss_dssp             HHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTSTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCccCCCcCHHHHHHHH
Confidence            9999999999999988 9999999999999998765321  111    23344566789999999875

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=100.00  E-value=1.1e-45  Score=299.29  Aligned_cols=218  Identities=27%  Similarity=0.423  Sum_probs=185.0

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEE-ecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      .+++||+++||||++|||++++++|+++|++|+++ .|+.+..+...+++.+.+.++.++.+|++++++++++++++.++
T Consensus         4 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (259)
T 3edm_A            4 QRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADK   83 (259)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999988 66677777788888877888999999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCc-CCCCCCchhhHhHH
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY-QPQSSMAMYGVTKT  165 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~-~~~~~~~~Y~~sKa  165 (226)
                      +|++|+||||||+.....++.+.+.++|++++++|+.|+++++++++|+|++.++||++||..+. .+.++...|++||+
T Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKa  163 (259)
T 3edm_A           84 FGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGGGPGALAYATSKG  163 (259)
T ss_dssp             HCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCCSTTCHHHHHHHH
T ss_pred             hCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCCCCCcHHHHHHHH
Confidence            99999999999987446788899999999999999999999999999999888899999999988 67889999999999


Q ss_pred             HHHHHHHHHHHHhCCCeEEEEEecCceeCCcccccccC---chhhhhhccCCCCCchhhhccc
Q 027248          166 ALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSN---DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       166 a~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~~~~~~~---~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      |+++|+++|+.|++++|+||+|+||+++|++.+....+   ..+....+..++..|+|+|+++
T Consensus       164 a~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v  226 (259)
T 3edm_A          164 AVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFTKPEVRERVAGATSLKREGSSEDVAGLV  226 (259)
T ss_dssp             HHHHHHHHHHHHHTTTCEEEEEEECCBCC----------------------CCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCCEEEEEEECCCcCcccccccChHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            99999999999998889999999999999998765432   2234455667888999999875

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=100.00  E-value=5e-46  Score=303.02  Aligned_cols=220  Identities=28%  Similarity=0.465  Sum_probs=197.9

Q ss_pred             ccccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHH
Q 027248            5 KMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTI   84 (226)
Q Consensus         5 ~~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (226)
                      .|+.+++||++|||||++|||++++++|+++|++|++++|+++++++..+++.+.+.++.++.+|++++++++++++++.
T Consensus        21 ~m~~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  100 (270)
T 3ftp_A           21 SMDKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTL  100 (270)
T ss_dssp             --CCTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHH
Confidence            45567899999999999999999999999999999999999999999888888878888999999999999999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhh--cCCEEEEEeccCCcCCCCCCchhhH
Q 027248           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGV  162 (226)
Q Consensus        85 ~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~--~~~~iv~~sS~~~~~~~~~~~~Y~~  162 (226)
                      ++++++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|.  +.++||++||..+..+.++...|++
T Consensus       101 ~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  179 (270)
T 3ftp_A          101 KEFGALNVLVNNAGITQ-DQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAA  179 (270)
T ss_dssp             HHHSCCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHH
T ss_pred             HHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCchhHHH
Confidence            99999999999999876 57788899999999999999999999999999984  3689999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC--chhhhhhccCCCCCchhhhccc
Q 027248          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN--DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       163 sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ||+|+++|+++|+.|+++ ||+||+|+||+++|++.+.....  ..+....+..++..|+|+|+++
T Consensus       180 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v  245 (270)
T 3ftp_A          180 AKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGLPQEQQTALKTQIPLGRLGSPEDIAHAV  245 (270)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHSCHHHHHHHHTTCTTCSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhcCHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence            999999999999999998 99999999999999987664322  1233455667888999999875

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=100.00  E-value=2.4e-45  Score=298.88  Aligned_cols=220  Identities=25%  Similarity=0.399  Sum_probs=194.8

Q ss_pred             ccccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecC-cchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHH
Q 027248            5 KMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRK-QKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQT   83 (226)
Q Consensus         5 ~~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   83 (226)
                      .++.+++||+++||||++|||++++++|+++|++|++++++ .+.++...+++.+.+.++.++.+|++++++++++++++
T Consensus        11 ~~~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   90 (270)
T 3is3_A           11 YIPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQA   90 (270)
T ss_dssp             CCTTCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             cCCCCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence            34567899999999999999999999999999999987765 55677778888888888999999999999999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccC-CcCCCCCCchhhH
Q 027248           84 IEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA-GYQPQSSMAMYGV  162 (226)
Q Consensus        84 ~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~-~~~~~~~~~~Y~~  162 (226)
                      .++++++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|+++++||++||.. +..+.++...|++
T Consensus        91 ~~~~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~a  169 (270)
T 3is3_A           91 VAHFGHLDIAVSNSGVVS-FGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDFSVPKHSLYSG  169 (270)
T ss_dssp             HHHHSCCCEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTCCCTTCHHHHH
T ss_pred             HHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccCCCCCCchhHH
Confidence            999999999999999875 67889999999999999999999999999999998889999999988 5668889999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCccccccc----------C----chhhhhhccCCCCCchhhhccc
Q 027248          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS----------N----DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       163 sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~----------~----~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ||+|+++|+++|+.|+++ ||+||+|+||+++|++.+....          .    ..+....+..++..|+|+|+++
T Consensus       170 sKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v  247 (270)
T 3is3_A          170 SKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANVV  247 (270)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTTCSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence            999999999999999998 9999999999999998764211          1    1123345677889999999875

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=100.00  E-value=3.9e-45  Score=295.89  Aligned_cols=214  Identities=29%  Similarity=0.417  Sum_probs=195.7

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEE-ecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      +||+++||||++|||++++++|+++|++|+++ +|+++.++...+++.+.+.++.++.+|++++++++++++++.+++++
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR   82 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            58999999999999999999999999999886 89988888888888888888999999999999999999999999999


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHHH
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~  167 (226)
                      +|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++  .++||++||..+..+.++...|++||+|+
T Consensus        83 id~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~  161 (258)
T 3oid_A           83 LDVFVNNAASGV-LRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAAL  161 (258)
T ss_dssp             CCEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCTTCHHHHHHHHHH
T ss_pred             CCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCCCcHHHHHHHHHH
Confidence            999999999876 678889999999999999999999999999999965  47999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch----hhhhhccCCCCCchhhhccc
Q 027248          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG----VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       168 ~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~----~~~~~~~~~~~~p~~~a~av  225 (226)
                      ++|+++|+.|+++ ||+||+|+||+++|++.+.......    +....+..++..|+|+|+++
T Consensus       162 ~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v  224 (258)
T 3oid_A          162 EALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIKDMVDTV  224 (258)
T ss_dssp             HHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHCTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            9999999999988 9999999999999999877654322    33455677899999999875

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=100.00  E-value=4.6e-45  Score=296.33  Aligned_cols=214  Identities=25%  Similarity=0.458  Sum_probs=181.5

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      ++||+++||||++|||++++++|+++|++|++++|++++++...+++...+.++.++.+|++++++++++++++.+++|+
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   81 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGR   81 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            35899999999999999999999999999999999999999999999888888999999999999999999999999999


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHHH
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~  167 (226)
                      +|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|++  .++||++||..+..+.++...|++||+|+
T Consensus        82 iD~lVnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal  160 (264)
T 3tfo_A           82 IDVLVNNAGVMP-LSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAV  160 (264)
T ss_dssp             CCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHH
T ss_pred             CCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCCCChhHHHHHHHH
Confidence            999999999876 678899999999999999999999999999999953  58999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCeEEEEEecCceeCCcccccccCchhh-hhhccCCCCCchhhhccc
Q 027248          168 LGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVV-SSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       168 ~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~-~~~~~~~~~~p~~~a~av  225 (226)
                      ++|+++|+.|+ +||+||+|+||+++|++........... .........+|+|+|+++
T Consensus       161 ~~l~~~la~e~-~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v  218 (264)
T 3tfo_A          161 RAISDGLRQES-TNIRVTCVNPGVVESELAGTITHEETMAAMDTYRAIALQPADIARAV  218 (264)
T ss_dssp             HHHHHHHHHHC-SSEEEEEEEECCC-----------------------CCCHHHHHHHH
T ss_pred             HHHHHHHHHhC-CCCEEEEEecCCCcCcccccccchhHHHHHHhhhccCCCHHHHHHHH
Confidence            99999999998 5999999999999999987654332211 111222357899999875

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=100.00  E-value=5.2e-46  Score=301.64  Aligned_cols=218  Identities=19%  Similarity=0.278  Sum_probs=186.8

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecC---cchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRK---QKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQT   83 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~---~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   83 (226)
                      ..+++||+++||||++|||++++++|+++|++|++++|+   .+++++..+++...+.++.++.+|++++++++++++++
T Consensus         6 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   85 (262)
T 3ksu_A            6 YHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFA   85 (262)
T ss_dssp             CSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence            457899999999999999999999999999999998765   44666777788777888999999999999999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHh
Q 027248           84 IEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVT  163 (226)
Q Consensus        84 ~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~s  163 (226)
                      .++++++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++.++||++||..+..+.++...|++|
T Consensus        86 ~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~Y~as  164 (262)
T 3ksu_A           86 EKEFGKVDIAINTVGKVL-KKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTGFYSTYAGN  164 (262)
T ss_dssp             HHHHCSEEEEEECCCCCC-SSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHHCCCCC----
T ss_pred             HHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCCCCCchhHHH
Confidence            999999999999999886 5788899999999999999999999999999999878999999999998888899999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCc---hhhhhhccCCCCCchhhhccc
Q 027248          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND---GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       164 Kaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~p~~~a~av  225 (226)
                      |+|+++|+++|+.|+++ ||+||+|+||+++|++........   .+....+..++.+|+|+|+++
T Consensus       165 Kaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v  230 (262)
T 3ksu_A          165 KAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQETKESTAFHKSQAMGNQLTKIEDIAPII  230 (262)
T ss_dssp             -CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC------------CCCCSCCGGGTHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCchHHHHHHHhcCcccCCCCHHHHHHHH
Confidence            99999999999999998 999999999999999876543322   233455667889999999875

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=100.00  E-value=5.9e-45  Score=300.10  Aligned_cols=219  Identities=24%  Similarity=0.355  Sum_probs=194.0

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCc--chHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ--KNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTI   84 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (226)
                      ..+++||++|||||++|||++++++|+++|++|++++|+.  +..+...+.+.+.+.++.++.+|++++++++++++++.
T Consensus        44 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  123 (294)
T 3r3s_A           44 SGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAR  123 (294)
T ss_dssp             CSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            3568899999999999999999999999999999999973  34556666666777889999999999999999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHhH
Q 027248           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTK  164 (226)
Q Consensus        85 ~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  164 (226)
                      ++++++|+||||||......++.+.+.++|++++++|+.|+++++++++|+|+++++||++||..+..+.++...|++||
T Consensus       124 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asK  203 (294)
T 3r3s_A          124 EALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATK  203 (294)
T ss_dssp             HHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             HHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCCCCchHHHHHH
Confidence            99999999999999875457788999999999999999999999999999998889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC----chhhhhhccCCCCCchhhhccc
Q 027248          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN----DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       165 aa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~----~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +|+++|+++|+.|+++ ||+||+|+||+++|++.......    ..+....+..++..|+|+|+++
T Consensus       204 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v  269 (294)
T 3r3s_A          204 AAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVY  269 (294)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCGGGSTTTTTTSTTSSCBCGGGGHHHH
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            9999999999999988 99999999999999984322111    2234556677899999999875

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.7e-45  Score=301.46  Aligned_cols=218  Identities=26%  Similarity=0.351  Sum_probs=185.8

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCc-EEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIE-VIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      .+++||+++||||++|||++++++|+++|++|++++|++++++...+++.+.+.. +.++.+|++++++++++++++.++
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  108 (281)
T 4dry_A           29 GSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAE  108 (281)
T ss_dssp             -----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999999998888888765444 488999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc----CCEEEEEeccCCcCCCCCCchhhH
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK----GSSVVLISSIAGYQPQSSMAMYGV  162 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~----~~~iv~~sS~~~~~~~~~~~~Y~~  162 (226)
                      +|++|+||||||+.....++.+.+.++|++++++|+.|+++++++++|.|++    .++||++||..+..+.++...|++
T Consensus       109 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~a  188 (281)
T 4dry_A          109 FARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYTA  188 (281)
T ss_dssp             HSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCTTCHHHHH
T ss_pred             cCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCCCChhHHH
Confidence            9999999999998754578899999999999999999999999999999964    469999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCc-hhhhhhccCCCCCchhhhccc
Q 027248          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND-GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       163 sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~-~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ||+|+++|+++|+.|+++ ||+||+|+||+++|++.+...... ......+..++.+|+|+|+++
T Consensus       189 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v  253 (281)
T 4dry_A          189 TKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMSTGVLQANGEVAAEPTIPIEHIAEAV  253 (281)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------CEEECTTSCEEECCCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcchhhhhhhcccccCCCCHHHHHHHH
Confidence            999999999999999998 999999999999999987654321 122334556788999999875

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=100.00  E-value=9.8e-45  Score=296.25  Aligned_cols=217  Identities=27%  Similarity=0.420  Sum_probs=195.7

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      .+++||+++||||++|||++++++|+++|++|++++|++++++...+++...+.++.++.+|++++++++++++++.+++
T Consensus        28 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  107 (276)
T 3r1i_A           28 FDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGEL  107 (276)
T ss_dssp             GCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999999999999999999999999998888889999999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc---CCEEEEEeccCCcCCC--CCCchhhH
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQ--SSMAMYGV  162 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~---~~~iv~~sS~~~~~~~--~~~~~Y~~  162 (226)
                      |++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|++   +++||++||..+..+.  ++.+.|++
T Consensus       108 g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~a  186 (276)
T 3r1i_A          108 GGIDIAVCNAGIVS-VQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCT  186 (276)
T ss_dssp             SCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCSSCCHHHHH
T ss_pred             CCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCCCCcchHHH
Confidence            99999999999876 577889999999999999999999999999999854   3789999999887654  36788999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC-chhhhhhccCCCCCchhhhccc
Q 027248          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN-DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       163 sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ||+|+++|+++|+.|+++ ||+||+|+||+++|++.+..... ..+....+..++..|+|+|+++
T Consensus       187 sKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v  251 (276)
T 3r1i_A          187 SKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLADYHALWEPKIPLGRMGRPEELTGLY  251 (276)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGGGHHHHGGGSTTSSCBCGGGSHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            999999999999999998 99999999999999998765332 2234556677899999999875

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=100.00  E-value=5.7e-45  Score=300.82  Aligned_cols=220  Identities=25%  Similarity=0.413  Sum_probs=192.3

Q ss_pred             ccccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecC------------cchHHHHHHHHHhcCCcEEEEEeeCCC
Q 027248            5 KMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRK------------QKNVDEAVVKLKARGIEVIGVVCHVSN   72 (226)
Q Consensus         5 ~~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~------------~~~~~~~~~~~~~~~~~~~~~~~Dv~~   72 (226)
                      .|..+++||+++||||++|||++++++|+++|++|++++|+            .+++++..+++...+.++.++.+|+++
T Consensus        21 ~m~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~  100 (299)
T 3t7c_A           21 SMAGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRD  100 (299)
T ss_dssp             -CCCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred             ccccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCC
Confidence            45567899999999999999999999999999999999987            566777777888878899999999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc---CCEEEEEeccC
Q 027248           73 GQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIA  149 (226)
Q Consensus        73 ~~~v~~~~~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~---~~~iv~~sS~~  149 (226)
                      +++++++++++.+++|++|+||||||+.....++.+.+.++|++++++|+.|+++++++++|+|.+   .++||++||..
T Consensus       101 ~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~  180 (299)
T 3t7c_A          101 FDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIG  180 (299)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGG
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChh
Confidence            999999999999999999999999998764445889999999999999999999999999999843   47999999999


Q ss_pred             CcCCCCCCchhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCccccccc---------Cch---------hhhhh
Q 027248          150 GYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS---------NDG---------VVSSV  210 (226)
Q Consensus       150 ~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~---------~~~---------~~~~~  210 (226)
                      +..+.++...|++||+|+++|+++|+.|+++ ||+||+|+||+++|++......         ...         .....
T Consensus       181 ~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (299)
T 3t7c_A          181 GLRGAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHVL  260 (299)
T ss_dssp             GTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHHHSSS
T ss_pred             hccCCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHhhhhccc
Confidence            9999999999999999999999999999998 9999999999999998753210         000         11222


Q ss_pred             ccCCCCCchhhhccc
Q 027248          211 SSLKLSPPSSLTLAV  225 (226)
Q Consensus       211 ~~~~~~~p~~~a~av  225 (226)
                      + .++..|+|+|+++
T Consensus       261 p-~r~~~pedvA~~v  274 (299)
T 3t7c_A          261 P-IPYVEPADISNAI  274 (299)
T ss_dssp             S-CSCBCHHHHHHHH
T ss_pred             C-cCCCCHHHHHHHH
Confidence            3 5688999999875

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=100.00  E-value=7.6e-45  Score=293.15  Aligned_cols=219  Identities=22%  Similarity=0.324  Sum_probs=193.7

Q ss_pred             CcccccccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCC-cEEEEEeeC--CCHHHHH
Q 027248            1 MEKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI-EVIGVVCHV--SNGQQRK   77 (226)
Q Consensus         1 ~~~~~~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv--~~~~~v~   77 (226)
                      |...+....++||+++||||++|||++++++|+++|++|++++|++++++...+++.+.+. ++.++.+|+  +++++++
T Consensus         1 M~~~~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   80 (252)
T 3f1l_A            1 MHYQPKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQ   80 (252)
T ss_dssp             CCCCCCTTTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHH
T ss_pred             CCcCCcccccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHH
Confidence            3333444568999999999999999999999999999999999999999888888876544 788899999  9999999


Q ss_pred             HHHHHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCC
Q 027248           78 NLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQS  155 (226)
Q Consensus        78 ~~~~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~  155 (226)
                      ++++++.+.++++|+||||||+.....++.+.+.++|++++++|+.|+++++++++|+|++  .++||++||..+..+.+
T Consensus        81 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~  160 (252)
T 3f1l_A           81 QLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRA  160 (252)
T ss_dssp             HHHHHHHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCT
T ss_pred             HHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCC
Confidence            9999999999999999999998654678889999999999999999999999999999954  48999999999999999


Q ss_pred             CCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          156 SMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       156 ~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +...|++||+|+++|+++|+.|+++.|+||+|+||+++|++.........      ..++.+|+|+|+++
T Consensus       161 ~~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~~~~~~~~~~~------~~~~~~p~dva~~~  224 (252)
T 3f1l_A          161 NWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAMRASAFPTED------PQKLKTPADIMPLY  224 (252)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSHHHHHHCTTCC------GGGSBCTGGGHHHH
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCchhhhhCCccc------hhccCCHHHHHHHH
Confidence            99999999999999999999999878999999999999998765433221      23577899998764

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=7.4e-45  Score=297.44  Aligned_cols=217  Identities=26%  Similarity=0.400  Sum_probs=190.9

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEec-------------CcchHHHHHHHHHhcCCcEEEEEeeCCCH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSR-------------KQKNVDEAVVKLKARGIEVIGVVCHVSNG   73 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r-------------~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   73 (226)
                      +.+++||+++||||++|||++++++|+++|++|++++|             +++++++..+++...+.++.++.+|++++
T Consensus        10 ~~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   89 (280)
T 3pgx_A           10 AGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDD   89 (280)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCH
T ss_pred             ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCH
Confidence            45789999999999999999999999999999999998             56677778888887788899999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc---CCEEEEEeccCC
Q 027248           74 QQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAG  150 (226)
Q Consensus        74 ~~v~~~~~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~---~~~iv~~sS~~~  150 (226)
                      ++++++++++.++++++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++   .++||++||..+
T Consensus        90 ~~v~~~~~~~~~~~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~  168 (280)
T 3pgx_A           90 AALRELVADGMEQFGRLDVVVANAGVLS-WGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAG  168 (280)
T ss_dssp             HHHHHHHHHHHHHHCCCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGG
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhh
Confidence            9999999999999999999999999976 578889999999999999999999999999999954   579999999999


Q ss_pred             cCCCCCCchhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccc------cCchhh------hhhccCCCCC
Q 027248          151 YQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYIT------SNDGVV------SSVSSLKLSP  217 (226)
Q Consensus       151 ~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~------~~~~~~------~~~~~~~~~~  217 (226)
                      ..+.++...|++||+|+++|+++|+.|+++ ||+||+|+||+++|++.+...      ......      ...+ .++..
T Consensus       169 ~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~r~~~  247 (280)
T 3pgx_A          169 LKATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQP-NGFMT  247 (280)
T ss_dssp             TSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGGGGGSCCBTTBC-SSCBC
T ss_pred             ccCCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCchhhhhhhhcccCC-CCCCC
Confidence            999999999999999999999999999998 999999999999999875411      111111      1112 25789


Q ss_pred             chhhhccc
Q 027248          218 PSSLTLAV  225 (226)
Q Consensus       218 p~~~a~av  225 (226)
                      |+|+|+++
T Consensus       248 p~dvA~~v  255 (280)
T 3pgx_A          248 ADEVADVV  255 (280)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99999875

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=100.00  E-value=4.3e-45  Score=295.69  Aligned_cols=216  Identities=28%  Similarity=0.411  Sum_probs=191.9

Q ss_pred             cccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus         6 ~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      |+.+++||+++||||++|||++++++|+++|++|++++|+.+++++..+++   +.++.++.+|++++++++++++++.+
T Consensus         2 mm~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~   78 (259)
T 4e6p_A            2 MMKRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI---GPAAYAVQMDVTRQDSIDAAIAATVE   78 (259)
T ss_dssp             --CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCCceEEEeeCCCHHHHHHHHHHHHH
Confidence            345688999999999999999999999999999999999998888777766   45688999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc---CCEEEEEeccCCcCCCCCCchhhH
Q 027248           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGV  162 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~---~~~iv~~sS~~~~~~~~~~~~Y~~  162 (226)
                      ++|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|.+   +++||++||..+..+.++...|++
T Consensus        79 ~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  157 (259)
T 4e6p_A           79 HAGGLDILVNNAALFD-LAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCA  157 (259)
T ss_dssp             HSSSCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHH
T ss_pred             HcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCCChHHHH
Confidence            9999999999999876 578889999999999999999999999999999854   579999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccc----------cC---chhhhhhccCCCCCchhhhccc
Q 027248          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYIT----------SN---DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       163 sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~----------~~---~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ||+|+++|+++|+.|+++ ||+||+|+||+++|++.+...          ..   ..+....+.+++..|+|+|+++
T Consensus       158 sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v  234 (259)
T 4e6p_A          158 TKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMA  234 (259)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHHHHH
Confidence            999999999999999988 999999999999999876541          11   1133445677899999999875

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=100.00  E-value=1.3e-44  Score=291.04  Aligned_cols=216  Identities=26%  Similarity=0.378  Sum_probs=191.1

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      .+++||+++||||++|||++++++|+++|++|++++|++++++...+++...+.++.++.+|++++++++++++++.+.+
T Consensus         3 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~   82 (247)
T 2jah_A            3 SALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEAL   82 (247)
T ss_dssp             CTTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            35789999999999999999999999999999999999998888888887777788999999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc-CCEEEEEeccCCcCCCCCCchhhHhHHH
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-GSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~-~~~iv~~sS~~~~~~~~~~~~Y~~sKaa  166 (226)
                      +++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++ +++||++||..+..+.++...|++||+|
T Consensus        83 g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a  161 (247)
T 2jah_A           83 GGLDILVNNAGIML-LGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSKGTVVQMSSIAGRVNVRNAAVYQATKFG  161 (247)
T ss_dssp             SCCSEEEECCCCCC-CCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTCCCTTCHHHHHHHHH
T ss_pred             CCCCEEEECCCCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEccHHhcCCCCCCcHHHHHHHH
Confidence            99999999999875 577888999999999999999999999999999853 4899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCc--hhhhhhccCCC--CCchhhhccc
Q 027248          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND--GVVSSVSSLKL--SPPSSLTLAV  225 (226)
Q Consensus       167 ~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~--~~~~~~~~~~~--~~p~~~a~av  225 (226)
                      +++|+++|+.|+++ ||+||+|+||+++|++........  ......+ .++  .+|+|+|+++
T Consensus       162 ~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~-~~~~~~~pedvA~~v  224 (247)
T 2jah_A          162 VNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHTATKEMYEQRI-SQIRKLQAQDIAEAV  224 (247)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCCHHHHHHHHHHT-TTSCCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccchhhHHHHHhcc-cccCCCCHHHHHHHH
Confidence            99999999999988 999999999999999976542211  1111222 344  8999999875

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=100.00  E-value=5.2e-45  Score=300.21  Aligned_cols=219  Identities=28%  Similarity=0.413  Sum_probs=197.1

Q ss_pred             cccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcC-CcEEEEEeeCCCHHHHHHHHHHHH
Q 027248            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG-IEVIGVVCHVSNGQQRKNLINQTI   84 (226)
Q Consensus         6 ~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~   84 (226)
                      ++.+++||+++||||++|||++++++|+++|++|++++|+.++++...+++.+.+ .++.++.+|++++++++++++++.
T Consensus        35 ~m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  114 (293)
T 3rih_A           35 VMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVV  114 (293)
T ss_dssp             CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHH
Confidence            3457899999999999999999999999999999999999999999999888776 578999999999999999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCc-CCCCCCchhh
Q 027248           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGY-QPQSSMAMYG  161 (226)
Q Consensus        85 ~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~-~~~~~~~~Y~  161 (226)
                      ++++++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|++  .++||++||..+. .+.++...|+
T Consensus       115 ~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~~~~~~Y~  193 (293)
T 3rih_A          115 DAFGALDVVCANAGIFP-EARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYG  193 (293)
T ss_dssp             HHHSCCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBCTTCHHHH
T ss_pred             HHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCCCCCHHHH
Confidence            99999999999999876 577889999999999999999999999999999854  5899999999986 7889999999


Q ss_pred             HhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC--chhhhhhccCCCCCchhhhccc
Q 027248          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN--DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       162 ~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +||+|+++|+++|+.|+++ ||+||+|+||+++|++.......  ..+....+..++.+|+|+|+++
T Consensus       194 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v  260 (293)
T 3rih_A          194 ASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMGEEYISGMARSIPMGMLGSPVDIGHLA  260 (293)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTCHHHHHHHHTTSTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhccHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence            9999999999999999998 99999999999999987654321  2234556677889999999865

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=100.00  E-value=9.6e-45  Score=295.54  Aligned_cols=217  Identities=28%  Similarity=0.392  Sum_probs=191.6

Q ss_pred             cccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus         6 ~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      |+.+++||+++||||++|||++++++|+++|++|++++|++++++...+++   +.++.++.+|++++++++++++++.+
T Consensus         5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~   81 (271)
T 3tzq_B            5 MTAELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV---GRGAVHHVVDLTNEVSVRALIDFTID   81 (271)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCCeEEEECCCCCHHHHHHHHHHHHH
Confidence            456789999999999999999999999999999999999999988887776   56788899999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCC-CCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhH
Q 027248           86 KFGKIDVVVSNAAANPS-VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGV  162 (226)
Q Consensus        86 ~~~~id~li~nag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~  162 (226)
                      ++|++|+||||||+... ..++.+.+.++|++++++|+.|+++++++++|+|++  .++||++||..+..+.++...|++
T Consensus        82 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~a  161 (271)
T 3tzq_B           82 TFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYAC  161 (271)
T ss_dssp             HHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCSSCHHHHH
T ss_pred             HcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCCCChHHHH
Confidence            99999999999998732 556788999999999999999999999999999954  479999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC---chhhhhhccCCCCCchhhhccc
Q 027248          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN---DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       163 sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~---~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ||+|+++|+++|+.|+++ ||+||+|+||+++|++.+.....   ..+....+..++.+|+|+|+++
T Consensus       162 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~p~dvA~~v  228 (271)
T 3tzq_B          162 TKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQPIVDIFATHHLAGRIGEPHEIAELV  228 (271)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---CHHHHHHHHTTSTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            999999999999999998 99999999999999987633222   2234455667888999999875

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=100.00  E-value=1.5e-44  Score=294.65  Aligned_cols=220  Identities=24%  Similarity=0.355  Sum_probs=193.1

Q ss_pred             ccccccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHH
Q 027248            3 KMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQ   82 (226)
Q Consensus         3 ~~~~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   82 (226)
                      .|....+++||+++||||++|||++++++|+++|++|++++|+ +..++..+++.+.+.++.++.+|++++++++++ .+
T Consensus        22 ~m~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~-~~   99 (273)
T 3uf0_A           22 SMTGPFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADGGGSAEAVVADLADLEGAANV-AE   99 (273)
T ss_dssp             ---CTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTTTCEEEEEECCTTCHHHHHHH-HH
T ss_pred             hcccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHH-HH
Confidence            4444567899999999999999999999999999999999965 566777778877788899999999999999999 55


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchh
Q 027248           83 TIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMY  160 (226)
Q Consensus        83 ~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y  160 (226)
                      ..+.++++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|++  .++||++||..+..+.++...|
T Consensus       100 ~~~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y  178 (273)
T 3uf0_A          100 ELAATRRVDVLVNNAGIIA-RAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAY  178 (273)
T ss_dssp             HHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSCHHH
T ss_pred             HHHhcCCCcEEEECCCCCC-CCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCCCChhH
Confidence            5566799999999999876 578889999999999999999999999999999854  5799999999999999999999


Q ss_pred             hHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch----hhhhhccCCCCCchhhhccc
Q 027248          161 GVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG----VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       161 ~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~----~~~~~~~~~~~~p~~~a~av  225 (226)
                      ++||+|+++|+++|+.|+++ ||+||+|+||+++|++.........    +....+.+++..|+|+|+++
T Consensus       179 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v  248 (273)
T 3uf0_A          179 AASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARIPAGRWATPEDMVGPA  248 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHSTTSSCBCGGGGHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence            99999999999999999998 9999999999999999876544332    34556777899999999875

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=100.00  E-value=8.9e-45  Score=293.55  Aligned_cols=216  Identities=24%  Similarity=0.359  Sum_probs=194.0

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      +++||++|||||++|||++++++|+++|++|++++|+++++++..+++.+.+.++.++.+|++++++++++++++.+++|
T Consensus         3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   82 (257)
T 3imf_A            3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFG   82 (257)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            46799999999999999999999999999999999999999999888887778899999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhh-hc--CCEEEEEeccCCcCCCCCCchhhHhHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHL-QK--GSSVVLISSIAGYQPQSSMAMYGVTKT  165 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l-~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKa  165 (226)
                      ++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+| ++  .++||++||..+..+.++...|++||+
T Consensus        83 ~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa  161 (257)
T 3imf_A           83 RIDILINNAAGNF-ICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKA  161 (257)
T ss_dssp             CCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTTCHHHHHHHH
T ss_pred             CCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCCcHHHHHHHH
Confidence            9999999999876 5788999999999999999999999999999998 33  589999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhC-C-CeEEEEEecCceeCCcccccc-----cCchhhhhhccCCCCCchhhhccc
Q 027248          166 ALLGLTKALAAEMA-P-DTRVNCVAPGFVPTHFAEYIT-----SNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       166 a~~~~~~~la~e~~-~-~i~v~~v~Pg~v~t~~~~~~~-----~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      |+++|+++|+.|++ + ||+||+|+||+++|++.....     ....+....+..++.+|+|+|+++
T Consensus       162 a~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v  228 (257)
T 3imf_A          162 GVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPLGRLGTPEEIAGLA  228 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTSTTCSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            99999999999997 6 999999999999999754321     112344556677899999999875

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=100.00  E-value=7.3e-45  Score=299.14  Aligned_cols=218  Identities=23%  Similarity=0.385  Sum_probs=194.3

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchH-HHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNV-DEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      .+++||++|||||++|||++++++|+++|++|++++|+.+.. +...+.+.+.+.++.++.+|++++++++++++++.++
T Consensus        43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  122 (291)
T 3ijr_A           43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQ  122 (291)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999998754 4445555566778999999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHhHHH
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa  166 (226)
                      ++++|+||||||+.....++.+.+.++|++++++|+.|+++++++++|+|++.++||++||..+..+.++...|++||+|
T Consensus       123 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  202 (291)
T 3ijr_A          123 LGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNETLIDYSATKGA  202 (291)
T ss_dssp             HSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCCTTCHHHHHHHHH
T ss_pred             cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCCCCChhHHHHHHH
Confidence            99999999999987655678899999999999999999999999999999888999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch---hhhhhccCCCCCchhhhccc
Q 027248          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG---VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       167 ~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~---~~~~~~~~~~~~p~~~a~av  225 (226)
                      +++|+++|+.|+++ ||+||+|+||+++|++.........   +....+..++.+|+|+|+++
T Consensus       203 ~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v  265 (291)
T 3ijr_A          203 IVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQFGSNVPMQRPGQPYELAPAY  265 (291)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSCHHHHHHTTTTSTTSSCBCGGGTHHHH
T ss_pred             HHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCCHHHHHHHHccCCCCCCcCHHHHHHHH
Confidence            99999999999998 9999999999999998765443322   33455677889999999875

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=100.00  E-value=3.5e-45  Score=294.37  Aligned_cols=213  Identities=26%  Similarity=0.398  Sum_probs=191.1

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      +++||+++||||++|||++++++|+++|++|++++|+++++++..+++   +.++.++.+|++++++++++++++.+.+|
T Consensus         3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   79 (247)
T 3rwb_A            3 RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI---GKKARAIAADISDPGSVKALFAEIQALTG   79 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CTTEEECCCCTTCHHHHHHHHHHHHHHHS
T ss_pred             CcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence            578999999999999999999999999999999999998888777766   56788999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc---CCEEEEEeccCCcCCCCCCchhhHhHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKT  165 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~---~~~iv~~sS~~~~~~~~~~~~Y~~sKa  165 (226)
                      ++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++   .++||++||..+..+.++...|++||+
T Consensus        80 ~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa  158 (247)
T 3rwb_A           80 GIDILVNNASIVP-FVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKG  158 (247)
T ss_dssp             CCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTTCHHHHHHHH
T ss_pred             CCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCCchhhHHHHH
Confidence            9999999999876 678889999999999999999999999999999954   479999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch--hhhh-hccCCCCCchhhhccc
Q 027248          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG--VVSS-VSSLKLSPPSSLTLAV  225 (226)
Q Consensus       166 a~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~--~~~~-~~~~~~~~p~~~a~av  225 (226)
                      |+++|+++|+.|+++ ||+||+|+||+++|++.........  +... .+..++.+|+|+|+++
T Consensus       159 a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~pedva~~v  222 (247)
T 3rwb_A          159 GVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNEAFGFVEMLQAMKGKGQPEHIADVV  222 (247)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGGHHHHHHHSSSCSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhHHHHHHhcccccCCCcCHHHHHHHH
Confidence            999999999999998 9999999999999998766433221  1222 4566788999999875

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=6.1e-45  Score=298.05  Aligned_cols=220  Identities=22%  Similarity=0.361  Sum_probs=176.9

Q ss_pred             cccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEec-CcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHH
Q 027248            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSR-KQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTI   84 (226)
Q Consensus         6 ~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (226)
                      |+.+++||+++||||++|||++++++|+++|++|++++| +++.++...+++...+.++.++.+|++++++++++++++.
T Consensus        23 mm~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  102 (280)
T 4da9_A           23 MMTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVV  102 (280)
T ss_dssp             CCSCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHH
T ss_pred             hhhccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            345688999999999999999999999999999999995 6777888888888888889999999999999999999999


Q ss_pred             HHhCCCCEEEEcCCCC-CCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc-----CCEEEEEeccCCcCCCCCCc
Q 027248           85 EKFGKIDVVVSNAAAN-PSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-----GSSVVLISSIAGYQPQSSMA  158 (226)
Q Consensus        85 ~~~~~id~li~nag~~-~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~-----~~~iv~~sS~~~~~~~~~~~  158 (226)
                      ++++++|+||||||+. ....++.+.+.++|++++++|+.|+++++++++|+|++     .++||++||..+..+.++..
T Consensus       103 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~  182 (280)
T 4da9_A          103 AEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPERL  182 (280)
T ss_dssp             HHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------CCH
T ss_pred             HHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCCCcc
Confidence            9999999999999984 22567889999999999999999999999999999954     46999999999999999999


Q ss_pred             hhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCc--hhhh-hhccCCCCCchhhhccc
Q 027248          159 MYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND--GVVS-SVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       159 ~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~--~~~~-~~~~~~~~~p~~~a~av  225 (226)
                      .|++||+|+++|+++|+.|+++ ||+||+|+||+++|++........  .... ..+..++.+|+|+|+++
T Consensus       183 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v  253 (280)
T 4da9_A          183 DYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSGKYDGLIESGLVPMRRWGEPEDIGNIV  253 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC----------------------CCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcchhHHHHHhhcCCCcCCcCCHHHHHHHH
Confidence            9999999999999999999998 999999999999999987653321  1222 45667889999999875

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=100.00  E-value=7.4e-45  Score=296.39  Aligned_cols=214  Identities=24%  Similarity=0.325  Sum_probs=176.8

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      ++.+|++|||||++|||++++++|+++|++|++++|+.+++++..+++   +.++.++.+|++++++++++++++.+++|
T Consensus        25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  101 (272)
T 4dyv_A           25 KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI---GDDALCVPTDVTDPDSVRALFTATVEKFG  101 (272)
T ss_dssp             ---CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---TSCCEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999999999999999999999998888877776   35788999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc----CCEEEEEeccCCcCCCCCCchhhHhH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK----GSSVVLISSIAGYQPQSSMAMYGVTK  164 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~----~~~iv~~sS~~~~~~~~~~~~Y~~sK  164 (226)
                      ++|+||||||+.....++.+.+.++|++++++|+.|+++++++++|.|++    +++||++||..+..+.++...|++||
T Consensus       102 ~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asK  181 (272)
T 4dyv_A          102 RVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYTATK  181 (272)
T ss_dssp             CCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTTCHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCCchHHHHHH
Confidence            99999999998764578899999999999999999999999999999964    47999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC-chhhhhhccCCCCCchhhhccc
Q 027248          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN-DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       165 aa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +|+++|+++|+.|+++ ||+||+|+||+++|++.+..... .......+..++..|+|+|+++
T Consensus       182 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v  244 (272)
T 4dyv_A          182 HAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAGVPQADLSIKVEPVMDVAHVASAV  244 (272)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEEEECC------------------------CHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhcccchhhhhcccccCCCCHHHHHHHH
Confidence            9999999999999998 99999999999999998765432 1222344556788999999875

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=5.8e-45  Score=293.58  Aligned_cols=212  Identities=26%  Similarity=0.368  Sum_probs=181.5

Q ss_pred             cccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhc--C-CcEEEEEeeCCCHHHHHHHHHH
Q 027248            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--G-IEVIGVVCHVSNGQQRKNLINQ   82 (226)
Q Consensus         6 ~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~-~~~~~~~~Dv~~~~~v~~~~~~   82 (226)
                      |+.++++|+++||||++|||++++++|+++|++|++++|++++++...+++.+.  + .++.++.+|+++++++++++++
T Consensus         1 M~~~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   80 (250)
T 3nyw_A            1 MSLEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKD   80 (250)
T ss_dssp             ----CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CcccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHH
Confidence            445678999999999999999999999999999999999999999888888765  3 5788999999999999999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchh
Q 027248           83 TIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMY  160 (226)
Q Consensus        83 ~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y  160 (226)
                      +.++++++|+||||||+.. ..++ +.+.++|++++++|+.|+++++++++|+|++  .++||++||..+..+.++...|
T Consensus        81 ~~~~~g~iD~lvnnAg~~~-~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  158 (250)
T 3nyw_A           81 IHQKYGAVDILVNAAAMFM-DGSL-SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGIY  158 (250)
T ss_dssp             HHHHHCCEEEEEECCCCCC-CCCC-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------CCTTHH
T ss_pred             HHHhcCCCCEEEECCCcCC-CCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCCCCcch
Confidence            9999999999999999875 4555 7889999999999999999999999999953  5899999999999877779999


Q ss_pred             hHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          161 GVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       161 ~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ++||+|+++|+++|+.|+++ ||+||+|+||+++|++.+....      ..+..++.+|+|+|+++
T Consensus       159 ~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~------~~~~~~~~~p~dva~~v  218 (250)
T 3nyw_A          159 GSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKAGT------PFKDEEMIQPDDLLNTI  218 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHTTC------CSCGGGSBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhhcCC------CcccccCCCHHHHHHHH
Confidence            99999999999999999998 9999999999999998765432      23445688999999875

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=100.00  E-value=5.6e-45  Score=297.56  Aligned_cols=219  Identities=26%  Similarity=0.322  Sum_probs=196.5

Q ss_pred             ccccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHH
Q 027248            5 KMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTI   84 (226)
Q Consensus         5 ~~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (226)
                      +|..+++||+++||||++|||++++++|+++|++|++++|++++++...+++...+.++.++.+|++++++++.+++++.
T Consensus        26 ~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (275)
T 4imr_A           26 ETIFGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAE  105 (275)
T ss_dssp             HHHHCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHH
T ss_pred             cccCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHH
Confidence            44567899999999999999999999999999999999999999999999998888899999999999999999999998


Q ss_pred             HHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhH
Q 027248           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGV  162 (226)
Q Consensus        85 ~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~  162 (226)
                      +. +++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++  .++||++||..+..+.++...|++
T Consensus       106 ~~-g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~a  183 (275)
T 4imr_A          106 AI-APVDILVINASAQI-NATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKSVVTAYAA  183 (275)
T ss_dssp             HH-SCCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHH
T ss_pred             Hh-CCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCchhhHH
Confidence            87 99999999999876 578889999999999999999999999999999853  589999999999988888889999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC-----chhhhhh-ccCCCCCchhhhccc
Q 027248          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN-----DGVVSSV-SSLKLSPPSSLTLAV  225 (226)
Q Consensus       163 sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~-----~~~~~~~-~~~~~~~p~~~a~av  225 (226)
                      ||+|+++|+++|+.|+++ ||+||+|+||+++|++.......     ..+.... +..++.+|+|+|+++
T Consensus       184 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v  253 (275)
T 4imr_A          184 TKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWMGRAGRPEEMVGAA  253 (275)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHSTTCSCBCGGGGHHHH
T ss_pred             HHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcCccCCCcCHHHHHHHH
Confidence            999999999999999998 99999999999999987654321     1122333 677899999999875

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.3e-44  Score=296.21  Aligned_cols=218  Identities=23%  Similarity=0.354  Sum_probs=185.9

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEec-CcchHHHHHHHHHhc-CCcEEEEEeeCCCHHHHHHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSR-KQKNVDEAVVKLKAR-GIEVIGVVCHVSNGQQRKNLINQTI   84 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (226)
                      ..++++|+++||||++|||++++++|+++|++|++++| +.+.++...+++... +.++.++.+|++++++++++++++.
T Consensus        20 ~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   99 (281)
T 3v2h_A           20 FQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVA   99 (281)
T ss_dssp             --CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHH
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999 556677777777655 5678899999999999999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhH
Q 027248           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGV  162 (226)
Q Consensus        85 ~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~  162 (226)
                      +++|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++  .++||++||..+..+.++.+.|++
T Consensus       100 ~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  178 (281)
T 3v2h_A          100 DRFGGADILVNNAGVQF-VEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYVA  178 (281)
T ss_dssp             HHTSSCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             HHCCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCCCchHHHH
Confidence            99999999999999876 678889999999999999999999999999999954  479999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCc--------------hhhhhhccCCCCCchhhhccc
Q 027248          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND--------------GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       163 sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~--------------~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ||+|+++|+++|+.|+++ ||+||+|+||+++|++.+......              .+....+..++..|+|+|+++
T Consensus       179 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~v  256 (281)
T 3v2h_A          179 AKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQVASLA  256 (281)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------CCTTCSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCccCHHHHHHHH
Confidence            999999999999999998 999999999999999876543321              123345667889999999875

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=100.00  E-value=1.2e-44  Score=295.79  Aligned_cols=215  Identities=25%  Similarity=0.398  Sum_probs=191.1

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      .++++||+++||||++|||++++++|+++|++|++++|+++++++..+++   +.++.++.+|++++++++++++++.++
T Consensus        22 ~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~   98 (277)
T 4dqx_A           22 SMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI---GSKAFGVRVDVSSAKDAESMVEKTTAK   98 (277)
T ss_dssp             CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            35688999999999999999999999999999999999998887776664   567889999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhH
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTK  164 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sK  164 (226)
                      +|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++  .++||++||..+..+.++...|++||
T Consensus        99 ~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  177 (277)
T 4dqx_A           99 WGRVDVLVNNAGFGT-TGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADRTAYVASK  177 (277)
T ss_dssp             HSCCCEEEECCCCCC-CBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             cCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCCCChhHHHHH
Confidence            999999999999876 577889999999999999999999999999999965  46999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCceeCCccccccc-Cch-------hhhhhccCCCCCchhhhccc
Q 027248          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS-NDG-------VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       165 aa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~-~~~-------~~~~~~~~~~~~p~~~a~av  225 (226)
                      +|+++|+++|+.|+++ ||+||+|+||+++|++...... ...       +....+..++.+|+|+|+++
T Consensus       178 aa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v  247 (277)
T 4dqx_A          178 GAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEAM  247 (277)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTSTTCSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcCcccCCcCHHHHHHHH
Confidence            9999999999999998 9999999999999998433221 111       33445667788999999875

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=100.00  E-value=7e-45  Score=294.06  Aligned_cols=216  Identities=23%  Similarity=0.300  Sum_probs=174.0

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      +++++||+++||||++|||++++++|+++|++|++++|++++.++..+++   +.++.++.+|++++++++++++++.++
T Consensus         2 ~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~   78 (257)
T 3tpc_A            2 VMQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL---GAAVRFRNADVTNEADATAALAFAKQE   78 (257)
T ss_dssp             --CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC---------------CEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            35688999999999999999999999999999999999998887777665   456888999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCc---cccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--------CCEEEEEeccCCcCCCC
Q 027248           87 FGKIDVVVSNAAANPSVDS---ILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--------GSSVVLISSIAGYQPQS  155 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~---~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--------~~~iv~~sS~~~~~~~~  155 (226)
                      +|++|+||||||+......   ..+.+.++|++++++|+.|+++++++++|+|++        .++||++||..+..+.+
T Consensus        79 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~  158 (257)
T 3tpc_A           79 FGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQI  158 (257)
T ss_dssp             HSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCT
T ss_pred             cCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCC
Confidence            9999999999998753221   236788999999999999999999999999964        46899999999999999


Q ss_pred             CCchhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC--chhhhhhcc-CCCCCchhhhccc
Q 027248          156 SMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN--DGVVSSVSS-LKLSPPSSLTLAV  225 (226)
Q Consensus       156 ~~~~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~-~~~~~p~~~a~av  225 (226)
                      +...|++||+|+++|+++|+.|+++ ||+||+|+||+++|++.+.....  ..+....+. .++..|+|+|+++
T Consensus       159 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~r~~~~~dva~~v  232 (257)
T 3tpc_A          159 GQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQDVQDALAASVPFPPRLGRAEEYAALV  232 (257)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC--------------CCSSSSCSCBCHHHHHHHH
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCHHHHHHHHhcCCCCCCCCCHHHHHHHH
Confidence            9999999999999999999999998 99999999999999998665432  122334444 6789999999875

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=100.00  E-value=2.7e-44  Score=296.42  Aligned_cols=221  Identities=20%  Similarity=0.227  Sum_probs=192.2

Q ss_pred             cccccccCCCEEEEEcCCC--chhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHH
Q 027248            4 MKMAKRFQGKVAIVTASTQ--GIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLIN   81 (226)
Q Consensus         4 ~~~~~~~~gk~vlItGa~~--giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   81 (226)
                      |....+++||++|||||+|  |||++++++|+++|++|++++|+++..+...+...+ .+.+.++.+|++++++++++++
T Consensus        22 m~~~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~  100 (296)
T 3k31_A           22 MRTGMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAES-LGVKLTVPCDVSDAESVDNMFK  100 (296)
T ss_dssp             CCCCCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHH-HTCCEEEECCTTCHHHHHHHHH
T ss_pred             ccchhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHh-cCCeEEEEcCCCCHHHHHHHHH
Confidence            3445678999999999997  999999999999999999999997655444443333 3346789999999999999999


Q ss_pred             HHHHHhCCCCEEEEcCCCCCC---CCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCc
Q 027248           82 QTIEKFGKIDVVVSNAAANPS---VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMA  158 (226)
Q Consensus        82 ~~~~~~~~id~li~nag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~  158 (226)
                      ++.+++|++|+||||||+...   ..++.+.+.++|++++++|+.++++++++++|+|++.++||++||..+..+.++..
T Consensus       101 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~~~~~  180 (296)
T 3k31_A          101 VLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVVPHYN  180 (296)
T ss_dssp             HHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTTTT
T ss_pred             HHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCCCCch
Confidence            999999999999999998752   26778899999999999999999999999999998889999999999999999999


Q ss_pred             hhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCc----hhhhhhccCCCCCchhhhccc
Q 027248          159 MYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND----GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       159 ~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~----~~~~~~~~~~~~~p~~~a~av  225 (226)
                      .|++||+|+++|+++|+.|+++ ||+||+|+||+++|++........    ......+..++.+|+|+|+++
T Consensus       181 ~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v  252 (296)
T 3k31_A          181 VMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPLRRNTTLDDVGGAA  252 (296)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHHHSTTSSCCCHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence            9999999999999999999988 999999999999999876654322    233455677899999999875

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=100.00  E-value=1.7e-44  Score=288.37  Aligned_cols=204  Identities=18%  Similarity=0.240  Sum_probs=175.5

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      ++|+++||||++|||++++++|+++|++|++++|+++++++..+++.   .++.++.+|++++++++++++++.+++|++
T Consensus         2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   78 (235)
T 3l6e_A            2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLG---NAVIGIVADLAHHEDVDVAFAAAVEWGGLP   78 (235)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG---GGEEEEECCTTSHHHHHHHHHHHHHHHCSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc---CCceEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            46999999999999999999999999999999999998888877773   258899999999999999999999999999


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc-CCEEEEEeccCCcCCCCCCchhhHhHHHHHH
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-GSSVVLISSIAGYQPQSSMAMYGVTKTALLG  169 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~-~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~  169 (226)
                      |+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++ +++||++||..+..+.++...|++||+|+++
T Consensus        79 d~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asKaa~~~  157 (235)
T 3l6e_A           79 ELVLHCAGTGE-FGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVGKANESLYCASKWGMRG  157 (235)
T ss_dssp             SEEEEECCCC-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCSSCSSHHHHHHHHHHHHH
T ss_pred             cEEEECCCCCC-CCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcCCCCCCcHHHHHHHHHHH
Confidence            99999999875 677889999999999999999999999999999965 4599999999999999999999999999999


Q ss_pred             HHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          170 LTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       170 ~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      |+++|+.|+++ ||+||+|+||+++|++......       ....++.+|+|+|+++
T Consensus       158 ~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-------~~~~~~~~pedvA~~v  207 (235)
T 3l6e_A          158 FLESLRAELKDSPLRLVNLYPSGIRSEFWDNTDH-------VDPSGFMTPEDAAAYM  207 (235)
T ss_dssp             HHHHHHHHTTTSSEEEEEEEEEEECCCC------------------CBCHHHHHHHH
T ss_pred             HHHHHHHHhhccCCEEEEEeCCCccCcchhccCC-------CCCcCCCCHHHHHHHH
Confidence            99999999998 9999999999999998765432       1234788999999864

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=100.00  E-value=1e-44  Score=296.51  Aligned_cols=215  Identities=27%  Similarity=0.406  Sum_probs=192.6

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      ++||++|||||++|||++++++|+++|++|++++|++++++...+++...+.++.++.+|++++++++++++++.+++|+
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  101 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGP  101 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999999999999999999999999888888999999999999999999999999999


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhh--hhhc--CCEEEEEeccCCcCCCCCCchhhHhHH
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAP--HLQK--GSSVVLISSIAGYQPQSSMAMYGVTKT  165 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~--~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKa  165 (226)
                      +|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|  .|++  .++||++||..+..+.++...|++||+
T Consensus       102 id~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asKa  180 (279)
T 3sju_A          102 IGILVNSAGRNG-GGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKH  180 (279)
T ss_dssp             CCEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CcEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCCCChhHHHHHH
Confidence            999999999876 57888999999999999999999999999999  4643  479999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCceeCCccccccc---------C----chhhhhhccCCCCCchhhhccc
Q 027248          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS---------N----DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       166 a~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~---------~----~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      |+++|+++|+.|+++ ||+||+|+||+++|++.+....         .    ..+....+.+++.+|+|+|+++
T Consensus       181 a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v  254 (279)
T 3sju_A          181 GVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEEVAGLV  254 (279)
T ss_dssp             HHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence            999999999999998 9999999999999998765421         1    1233455667889999999875

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=100.00  E-value=2e-44  Score=294.94  Aligned_cols=217  Identities=23%  Similarity=0.358  Sum_probs=189.2

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecC------------cchHHHHHHHHHhcCCcEEEEEeeCCCHHH
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRK------------QKNVDEAVVKLKARGIEVIGVVCHVSNGQQ   75 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~------------~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   75 (226)
                      .+++||+++||||++|||++++++|+++|++|++++|+            .+.++...+++...+.++.++.+|++++++
T Consensus         6 ~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   85 (281)
T 3s55_A            6 ADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAA   85 (281)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHH
Confidence            36889999999999999999999999999999999997            445666667777778889999999999999


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCC
Q 027248           76 RKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQP  153 (226)
Q Consensus        76 v~~~~~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~  153 (226)
                      ++++++++.+.+|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++  .++||++||..+..+
T Consensus        86 v~~~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  164 (281)
T 3s55_A           86 LESFVAEAEDTLGGIDIAITNAGIST-IALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSA  164 (281)
T ss_dssp             HHHHHHHHHHHHTCCCEEEECCCCCC-CCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSC
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCC
Confidence            99999999999999999999999876 578889999999999999999999999999999854  579999999999999


Q ss_pred             CCCCchhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccc------c---Cchh--------hhhhccCCC
Q 027248          154 QSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYIT------S---NDGV--------VSSVSSLKL  215 (226)
Q Consensus       154 ~~~~~~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~------~---~~~~--------~~~~~~~~~  215 (226)
                      .++...|++||+|+++|+++|+.|+++ ||+||+|+||+++||+.....      .   ....        .......++
T Consensus       165 ~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (281)
T 3s55_A          165 NFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQYAPF  244 (281)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHHHHHHCSSSCSC
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHHHHhhhccCcCC
Confidence            999999999999999999999999988 999999999999999875311      0   0000        001112678


Q ss_pred             CCchhhhccc
Q 027248          216 SPPSSLTLAV  225 (226)
Q Consensus       216 ~~p~~~a~av  225 (226)
                      ..|+|+|+++
T Consensus       245 ~~p~dvA~~v  254 (281)
T 3s55_A          245 LKPEEVTRAV  254 (281)
T ss_dssp             BCHHHHHHHH
T ss_pred             CCHHHHHHHH
Confidence            8999999875

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=100.00  E-value=1.1e-44  Score=296.15  Aligned_cols=214  Identities=29%  Similarity=0.451  Sum_probs=190.4

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      .+++||+++||||++|||++++++|+++|++|++++|++++++...+++   +.++.++.+|++++++++++++++.+++
T Consensus        25 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  101 (277)
T 3gvc_A           25 PDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI---GCGAAACRVDVSDEQQIIAMVDACVAAF  101 (277)
T ss_dssp             --CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---CSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCcceEEEecCCCHHHHHHHHHHHHHHc
Confidence            4689999999999999999999999999999999999998888777766   5678899999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHH
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKT  165 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKa  165 (226)
                      +++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|++  .++||++||..+..+.++...|++||+
T Consensus       102 g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKa  180 (277)
T 3gvc_A          102 GGVDKLVANAGVVH-LASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKA  180 (277)
T ss_dssp             SSCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred             CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCchhHHHHHH
Confidence            99999999999876 577889999999999999999999999999999953  579999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC------chhhh---hhccCCCCCchhhhccc
Q 027248          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN------DGVVS---SVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       166 a~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~------~~~~~---~~~~~~~~~p~~~a~av  225 (226)
                      |+++|+++|+.|+++ ||+||+|+||+++|++.+.....      .....   ..+..++.+|+|+|+++
T Consensus       181 a~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v  250 (277)
T 3gvc_A          181 GIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIV  250 (277)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC------CCHHHHHHHHHSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhhHHHHhhhhhhhccccCCCCHHHHHHHH
Confidence            999999999999998 99999999999999987654321      11122   44567899999999875

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=100.00  E-value=1.1e-44  Score=291.29  Aligned_cols=215  Identities=27%  Similarity=0.484  Sum_probs=192.4

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecC-cchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRK-QKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      +.+|+++||||++|||++++++|+++|++|++++|+ .++.+...+++...+.++.++.+|++++++++++++++.++++
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   81 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFG   81 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            357999999999999999999999999999988874 5677788888888888899999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa  166 (226)
                      ++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++  .++||++||..+..+.++...|++||+|
T Consensus        82 ~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  160 (246)
T 3osu_A           82 SLDVLVNNAGITR-DNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAG  160 (246)
T ss_dssp             CCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHH
T ss_pred             CCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHHHH
Confidence            9999999999876 577889999999999999999999999999999843  5799999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC--chhhhhhccCCCCCchhhhccc
Q 027248          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN--DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       167 ~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +++|+++++.|+++ ||+||+|+||+++|++.+.....  ..+....+..++..|+|+|+++
T Consensus       161 ~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v  222 (246)
T 3osu_A          161 VIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQDTDIANTV  222 (246)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSCHHHHHHHHTTCTTCSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            99999999999988 99999999999999997665322  2233455667889999999875

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=3.2e-44  Score=294.45  Aligned_cols=213  Identities=22%  Similarity=0.355  Sum_probs=190.8

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcc-------hHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK-------NVDEAVVKLKARGIEVIGVVCHVSNGQQRKNL   79 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~-------~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   79 (226)
                      .++++||+++||||++|||++++++|+++|++|++++|+.+       .+++..+++.+.+.++.++.+|++++++++++
T Consensus         4 ~m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   83 (285)
T 3sc4_A            4 SMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAA   83 (285)
T ss_dssp             --CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            34578999999999999999999999999999999999987       56777778877788899999999999999999


Q ss_pred             HHHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCC-CC
Q 027248           80 INQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQ-SS  156 (226)
Q Consensus        80 ~~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~-~~  156 (226)
                      ++++.++++++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++  .++||++||..+..+. ++
T Consensus        84 ~~~~~~~~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~  162 (285)
T 3sc4_A           84 VAKTVEQFGGIDICVNNASAIN-LGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLR  162 (285)
T ss_dssp             HHHHHHHHSCCSEEEECCCCCC-CCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGGSC
T ss_pred             HHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCCCC
Confidence            9999999999999999999876 678889999999999999999999999999999964  4799999999988775 78


Q ss_pred             CchhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecC-ceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          157 MAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPG-FVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       157 ~~~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg-~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ...|++||+|+++|+++|+.|+++ ||+||+|+|| +++|++.+......     .+..++.+|+|+|+++
T Consensus       163 ~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~~~~~~~~-----~~~~r~~~pedvA~~~  228 (285)
T 3sc4_A          163 PTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQNLLGGD-----EAMARSRKPEVYADAA  228 (285)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHHHHHHTSC-----CCCTTCBCTHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHHHhhcccc-----ccccCCCCHHHHHHHH
Confidence            899999999999999999999998 9999999999 69999877654332     2456788999999875

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=100.00  E-value=2.3e-44  Score=291.81  Aligned_cols=219  Identities=26%  Similarity=0.449  Sum_probs=193.5

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      ..+++||+++||||++|||++++++|+++|++|++++|++++++...+++.+.+.++.++.+|++++++++++++++.+.
T Consensus         2 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (262)
T 1zem_A            2 SKKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRD   81 (262)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CcccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999998888888888777778899999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhH
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTK  164 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sK  164 (226)
                      ++++|+||||||+.....++.+.+.++|++++++|+.++++++++++|.|++  .++||++||..+..+.++...|++||
T Consensus        82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  161 (262)
T 1zem_A           82 FGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSK  161 (262)
T ss_dssp             HSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHH
T ss_pred             hCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCCchHHHHH
Confidence            9999999999998733577888999999999999999999999999999854  47999999999988889999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCceeCCccccc------------cc-Cch-----hhhhhccCCCCCchhhhccc
Q 027248          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYI------------TS-NDG-----VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       165 aa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~------------~~-~~~-----~~~~~~~~~~~~p~~~a~av  225 (226)
                      +++++|+++|+.|+++ ||+||+|+||+++|++....            .. ...     +....+..++.+|+|+|+++
T Consensus       162 ~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v  241 (262)
T 1zem_A          162 GAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVV  241 (262)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGGGSHHHH
T ss_pred             HHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            9999999999999988 99999999999999987552            11 111     22334567789999999875

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=6.7e-45  Score=298.76  Aligned_cols=219  Identities=21%  Similarity=0.304  Sum_probs=193.3

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCC---eEEEEecCcchHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGA---SVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLIN   81 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~---~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~   81 (226)
                      ..+++||+++||||++|||++++++|+++|+   +|++++|+.+++++..+++...  +.++.++.+|++++++++++++
T Consensus        28 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~  107 (287)
T 3rku_A           28 AERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIE  107 (287)
T ss_dssp             HHHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHH
T ss_pred             hhhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHH
Confidence            4568999999999999999999999999998   9999999999999988888765  5678899999999999999999


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCch
Q 027248           82 QTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAM  159 (226)
Q Consensus        82 ~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~  159 (226)
                      ++.+++|++|+||||||+.....++.+.+.++|++++++|+.|+++++++++|+|++  .++||++||..+..+.++...
T Consensus       108 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~  187 (287)
T 3rku_A          108 NLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSI  187 (287)
T ss_dssp             TSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHH
T ss_pred             HHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCCCCCch
Confidence            999999999999999998754567889999999999999999999999999999953  589999999999999999999


Q ss_pred             hhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC--chhhhhhccCCCCCchhhhccc
Q 027248          160 YGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN--DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       160 Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      |++||+|+++|+++|+.|+++ ||+||+|+||+++|++.......  ......+.......|+|+|+++
T Consensus       188 Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~pedvA~~v  256 (287)
T 3rku_A          188 YCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKDTTPLMADDVADLI  256 (287)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHHTTSCCEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHHHHhhcccCCCCHHHHHHHH
Confidence            999999999999999999998 99999999999999986443222  1222333444455899999875

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=100.00  E-value=5.4e-44  Score=289.30  Aligned_cols=218  Identities=31%  Similarity=0.482  Sum_probs=193.8

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      .++++||+++||||++|||++++++|+++|++|++++|++++++...+++...+.++.++.+|++++++++++++++.+.
T Consensus         4 ~~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (260)
T 2ae2_A            4 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANH   83 (260)
T ss_dssp             TTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999998888888888777778889999999999999999999999


Q ss_pred             h-CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHh
Q 027248           87 F-GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVT  163 (226)
Q Consensus        87 ~-~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~s  163 (226)
                      + +++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++  .++||++||..+..+.++...|++|
T Consensus        84 ~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  162 (260)
T 2ae2_A           84 FHGKLNILVNNAGIVI-YKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGAT  162 (260)
T ss_dssp             TTTCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             cCCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCcchHHHH
Confidence            9 89999999999875 567888999999999999999999999999999954  4799999999999888999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch-------hhhhhccCCCCCchhhhccc
Q 027248          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG-------VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       164 Kaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~-------~~~~~~~~~~~~p~~~a~av  225 (226)
                      |+++++|+++++.|+++ ||+||+|+||+++|++.........       +....+..++..|+|+|+++
T Consensus       163 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v  232 (260)
T 2ae2_A          163 KGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMV  232 (260)
T ss_dssp             HHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence            99999999999999988 9999999999999998765433221       22234556788999999865

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=100.00  E-value=1.4e-44  Score=293.80  Aligned_cols=215  Identities=23%  Similarity=0.414  Sum_probs=182.6

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      +.+++||+++||||++|||++++++|+++|++|++++|+++++++..+++   +.++.++.+|++++++++++++++.++
T Consensus        22 m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~   98 (266)
T 3grp_A           22 MFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL---GKDVFVFSANLSDRKSIKQLAEVAERE   98 (266)
T ss_dssp             TTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CSSEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceEEEEeecCCHHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999998887776554   567899999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhH
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTK  164 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sK  164 (226)
                      ++++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|++  .++||++||..+..+.++...|++||
T Consensus        99 ~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asK  177 (266)
T 3grp_A           99 MEGIDILVNNAGITR-DGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAAK  177 (266)
T ss_dssp             HTSCCEEEECCCCC------CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-------CHHHHHHHH
T ss_pred             cCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCCCchhHHHHH
Confidence            999999999999876 577888999999999999999999999999999854  57999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC--chhhhhhccCCCCCchhhhccc
Q 027248          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN--DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       165 aa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +|+++|+++|+.|+++ ||+||+|+||+++|++.+.....  ..+....+..++..|+|+|+++
T Consensus       178 aa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~v  241 (266)
T 3grp_A          178 AGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLNEKQKEAIMAMIPMKRMGIGEEIAFAT  241 (266)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCCHHHHHHHHTTCTTCSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhccCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            9999999999999998 99999999999999987765322  2234456677889999999875

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=100.00  E-value=2.6e-44  Score=293.82  Aligned_cols=218  Identities=24%  Similarity=0.320  Sum_probs=193.9

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhc-CCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      ...++||+++||||++|||++++++|+++|++|++++|+.+++++..+++.+. +.++.++.+|++++++++++++++.+
T Consensus        22 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  101 (277)
T 4fc7_A           22 PDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALK  101 (277)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            34589999999999999999999999999999999999999888888877543 66889999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHh
Q 027248           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVT  163 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~s  163 (226)
                      +++++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|.+  .++||++||..+..+.++...|++|
T Consensus       102 ~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  180 (277)
T 4fc7_A          102 EFGRIDILINCAAGNF-LCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSA  180 (277)
T ss_dssp             HHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCTTCHHHHHH
T ss_pred             HcCCCCEEEECCcCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCcHHHHHH
Confidence            9999999999999875 678889999999999999999999999999999843  6899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCccccccc-C----chhhhhhccCCCCCchhhhccc
Q 027248          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS-N----DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       164 Kaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~-~----~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      |+|+++|+++|+.|+++ ||+||+|+||+++|++...... .    .......+..++.+|+|+|+++
T Consensus       181 Kaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v  248 (277)
T 4fc7_A          181 KAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSV  248 (277)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTSTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCCCCCCcCHHHHHHHH
Confidence            99999999999999998 9999999999999986433221 1    1233455677899999999875

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=100.00  E-value=4.1e-44  Score=287.69  Aligned_cols=216  Identities=25%  Similarity=0.425  Sum_probs=196.5

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      ++++|+++||||++|||++++++|+++|++|++++|++++.+...+++.+.+.++.++.+|++++++++++++++.++++
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (247)
T 3lyl_A            2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENL   81 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            46799999999999999999999999999999999999999999999888888999999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa  166 (226)
                      ++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|.+  .++||++||..+..+.++...|++||+|
T Consensus        82 ~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  160 (247)
T 3lyl_A           82 AIDILVNNAGITR-DNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNYCAAKAG  160 (247)
T ss_dssp             CCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHH
T ss_pred             CCCEEEECCCCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCcHHHHHHHHH
Confidence            9999999999876 577888999999999999999999999999999854  5799999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCc--hhhhhhccCCCCCchhhhccc
Q 027248          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND--GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       167 ~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~--~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +++|+++|+.|+.+ ||+||+|+||+++|++.+......  .+....+..++..|+|+|+++
T Consensus       161 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i  222 (247)
T 3lyl_A          161 VIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLTDEQKSFIATKIPSGQIGEPKDIAAAV  222 (247)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSCHHHHHHHHTTSTTCCCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhccHHHHHHHhhcCCCCCCcCHHHHHHHH
Confidence            99999999999988 999999999999999987654321  233455667789999999875

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=100.00  E-value=9.8e-44  Score=289.82  Aligned_cols=217  Identities=29%  Similarity=0.467  Sum_probs=188.1

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      ++++||+++||||++|||++++++|+++|++|++++|++++++...+++.+.+.++.++.+|++++++++++++++.+.+
T Consensus        17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   96 (273)
T 1ae1_A           17 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVF   96 (273)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            45789999999999999999999999999999999999988888888887777788999999999999999999999999


Q ss_pred             -CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhH
Q 027248           88 -GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTK  164 (226)
Q Consensus        88 -~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sK  164 (226)
                       +++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|+|++  .++||++||..+..+.++...|++||
T Consensus        97 ~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  175 (273)
T 1ae1_A           97 DGKLNILVNNAGVVI-HKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASK  175 (273)
T ss_dssp             TSCCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCCcEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCCCcchhHHHH
Confidence             99999999999875 567888999999999999999999999999999954  57999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCceeCCccccccc----Cch----hhhhhccCCCCCchhhhccc
Q 027248          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS----NDG----VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       165 aa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~----~~~----~~~~~~~~~~~~p~~~a~av  225 (226)
                      +++++|+++++.|+++ ||+||+|+||+++|++......    ...    +....+..++.+|+|+|+++
T Consensus       176 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v  245 (273)
T 1ae1_A          176 GAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALI  245 (273)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            9999999999999988 9999999999999998765432    111    22334566788999999875

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=100.00  E-value=1.5e-43  Score=287.12  Aligned_cols=212  Identities=31%  Similarity=0.431  Sum_probs=184.8

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      .+++||+++||||++|||++++++|+++|++|++++|+.++++...+++.+.+.++.++.+|++++++++++++++.+.+
T Consensus        25 ~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~  104 (262)
T 3rkr_A           25 SSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAH  104 (262)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             hccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhc
Confidence            45789999999999999999999999999999999999999999999998888899999999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHH
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKT  165 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKa  165 (226)
                      +++|+||||||+.....++.+.+.++|++++++|+.|+++++++++|+|++  .++||++||..+..+.++...|++||+
T Consensus       105 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa  184 (262)
T 3rkr_A          105 GRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKW  184 (262)
T ss_dssp             SCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCTTCHHHHHHHH
T ss_pred             CCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCchHHHHHH
Confidence            999999999998544678889999999999999999999999999999853  589999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       166 a~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      |+++|+++|+.|+.+ ||+|++|+||+++|++.......      ....+..+|+|+|+++
T Consensus       185 a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~------~~~~~~~~p~dvA~~v  239 (262)
T 3rkr_A          185 GLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLSAK------KSALGAIEPDDIADVV  239 (262)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECCC----------------------CCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhcCcEEEEEecCCCcCCcccccccc------cccccCCCHHHHHHHH
Confidence            999999999999988 99999999999999987664332      2345678999999875

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=100.00  E-value=5.2e-44  Score=291.66  Aligned_cols=210  Identities=23%  Similarity=0.395  Sum_probs=183.1

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcch-------HHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHH
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN-------VDEAVVKLKARGIEVIGVVCHVSNGQQRKNLI   80 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   80 (226)
                      ++++||+++||||++|||++++++|+++|++|++++|+.++       ++...+++...+.++.++.+|+++++++++++
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   81 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAV   81 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence            35789999999999999999999999999999999999764       66677777777888999999999999999999


Q ss_pred             HHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCC--CCC
Q 027248           81 NQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQP--QSS  156 (226)
Q Consensus        81 ~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~--~~~  156 (226)
                      +++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++  .++||++||..+..+  .++
T Consensus        82 ~~~~~~~g~iD~lvnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~  160 (274)
T 3e03_A           82 AATVDTFGGIDILVNNASAIW-LRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGA  160 (274)
T ss_dssp             HHHHHHHSCCCEEEECCCCCC-CCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHHHHH
T ss_pred             HHHHHHcCCCCEEEECCCccc-CCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCCC
Confidence            999999999999999999876 578889999999999999999999999999999954  489999999998877  678


Q ss_pred             CchhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecC-ceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          157 MAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPG-FVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       157 ~~~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg-~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ...|++||+|+++|+++|+.|+++ ||+||+|+|| +++|++.+.....       ...++.+|+|+|+++
T Consensus       161 ~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~~~~~~-------~~~~~~~pedvA~~v  224 (274)
T 3e03_A          161 HTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAINMLPGV-------DAAACRRPEIMADAA  224 (274)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC-------CC-------CGGGSBCTHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhhhcccc-------cccccCCHHHHHHHH
Confidence            889999999999999999999998 9999999999 6999987443221       223477899999875

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=100.00  E-value=7.7e-44  Score=294.34  Aligned_cols=217  Identities=27%  Similarity=0.424  Sum_probs=191.3

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      .+++||+++||||++|||++++++|+++|++|++++|+.++++...+++...+.++.++.+|+++.++++++++++.+.+
T Consensus        27 ~~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  106 (301)
T 3tjr_A           27 SGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLL  106 (301)
T ss_dssp             CCSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             hccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhC
Confidence            35899999999999999999999999999999999999999999999998888889999999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc---CCEEEEEeccCCcCCCCCCchhhHhH
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTK  164 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~---~~~iv~~sS~~~~~~~~~~~~Y~~sK  164 (226)
                      +++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++   .++||++||..+..+.++.+.|++||
T Consensus       107 g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  185 (301)
T 3tjr_A          107 GGVDVVFSNAGIVV-AGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAK  185 (301)
T ss_dssp             SSCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             CCCCEEEECCCcCC-CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCchHHHHHH
Confidence            99999999999886 578889999999999999999999999999999854   47999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch------------hhhhhccCCCCCchhhhccc
Q 027248          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG------------VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       165 aa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~------------~~~~~~~~~~~~p~~~a~av  225 (226)
                      +|+++|+++|+.|+.+ ||+|++|+||+++|++.........            +..........+|+|+|+++
T Consensus       186 aa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i  259 (301)
T 3tjr_A          186 YGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVARLT  259 (301)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC----------------------CCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcccCcEEEEEECCccccccccccccccchhhccccChhhhccccccccCCCCHHHHHHHH
Confidence            9999999999999988 9999999999999998765321110            11111223467999999864

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=100.00  E-value=9.2e-44  Score=292.83  Aligned_cols=217  Identities=19%  Similarity=0.225  Sum_probs=185.2

Q ss_pred             cccCCCEEEEEcCC--CchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248            8 KRFQGKVAIVTAST--QGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus         8 ~~~~gk~vlItGa~--~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      .+++||++|||||+  +|||++++++|+++|++|++++|+++. .+..+++.+...++.++.+|++++++++++++++.+
T Consensus        27 ~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  105 (293)
T 3grk_A           27 GLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDAL-KKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEK  105 (293)
T ss_dssp             CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHH-HHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHH-HHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHH
Confidence            35889999999999  459999999999999999999999543 333444444445688999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCC---CCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhH
Q 027248           86 KFGKIDVVVSNAAANPS---VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGV  162 (226)
Q Consensus        86 ~~~~id~li~nag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~  162 (226)
                      ++|++|+||||||+...   ..++.+.+.++|++++++|+.++++++++++|+|++.++||++||..+..+.++...|++
T Consensus       106 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~Y~a  185 (293)
T 3grk_A          106 KWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVMPNYNVMGV  185 (293)
T ss_dssp             HTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBCTTTTHHHH
T ss_pred             hcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCCCchHHHHH
Confidence            99999999999998742   367788999999999999999999999999999988899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCc----hhhhhhccCCCCCchhhhccc
Q 027248          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND----GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       163 sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~----~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ||+|+++|+++|+.|+++ ||+||+|+||+++|++.+......    .+....+..++.+|+|+|+++
T Consensus       186 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v  253 (293)
T 3grk_A          186 AKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIDEVGDVG  253 (293)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHHHHHHHHHHHSTTSSCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence            999999999999999998 999999999999999877654322    233456777899999999875

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=100.00  E-value=7.9e-44  Score=288.52  Aligned_cols=213  Identities=18%  Similarity=0.209  Sum_probs=174.6

Q ss_pred             cccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus         6 ~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      .+++++||+++||||++|||++++++|+++|++|++++|++++..+...+.   +  +.++.+|++++++++++++++.+
T Consensus        21 ~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~Dv~~~~~v~~~~~~~~~   95 (260)
T 3gem_A           21 GHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQA---G--AVALYGDFSCETGIMAFIDLLKT   95 (260)
T ss_dssp             ------CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHH---T--CEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhc---C--CeEEECCCCCHHHHHHHHHHHHH
Confidence            346788999999999999999999999999999999999998764444333   2  67889999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcC--CEEEEEeccCCcCCCCCCchhhHh
Q 027248           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKG--SSVVLISSIAGYQPQSSMAMYGVT  163 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~--~~iv~~sS~~~~~~~~~~~~Y~~s  163 (226)
                      .++++|+||||||+... .. .+.+.++|++++++|+.|+++++++++|+|++.  ++||++||..+..+.++...|++|
T Consensus        96 ~~g~iD~lv~nAg~~~~-~~-~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~as  173 (260)
T 3gem_A           96 QTSSLRAVVHNASEWLA-ET-PGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYCAT  173 (260)
T ss_dssp             HCSCCSEEEECCCCCCC-CC-TTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCSSCHHHHHH
T ss_pred             hcCCCCEEEECCCccCC-CC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCcHhHHHH
Confidence            99999999999998752 33 567889999999999999999999999999653  799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCCCeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          164 KTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       164 Kaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      |+|+++|+++|+.|++++|+||+|+||+++|++.........+....+..++.+|+|+|+++
T Consensus       174 Kaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~~~~~~~~~~~~p~~r~~~~edva~~v  235 (260)
T 3gem_A          174 KAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKDDAAYRANALAKSALGIEPGAEVIYQSL  235 (260)
T ss_dssp             HHHHHHHHHHHHHHHTTTCEEEEEEECTTCC---------------CCSCCCCCTHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCCCHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence            99999999999999988999999999999999765333333445566777888999999875

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=100.00  E-value=1.7e-43  Score=287.12  Aligned_cols=220  Identities=20%  Similarity=0.264  Sum_probs=192.2

Q ss_pred             cccccCCCEEEEEcCC--CchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCC-cEEEEEeeCCCHHHHHHHHHH
Q 027248            6 MAKRFQGKVAIVTAST--QGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI-EVIGVVCHVSNGQQRKNLINQ   82 (226)
Q Consensus         6 ~~~~~~gk~vlItGa~--~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~   82 (226)
                      |+++++||+++||||+  +|||++++++|+++|++|++++|+....+...+...+.+. ++.++.+|+++++++++++++
T Consensus         1 M~~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   80 (266)
T 3oig_A            1 MNFSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFAS   80 (266)
T ss_dssp             CCSCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHH
T ss_pred             CccccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHH
Confidence            4457889999999999  6699999999999999999999997555544444444443 688999999999999999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCC---CCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCch
Q 027248           83 TIEKFGKIDVVVSNAAANPS---VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAM  159 (226)
Q Consensus        83 ~~~~~~~id~li~nag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~  159 (226)
                      +.++++++|+||||||+...   ..++.+.+.++|++++++|+.++++++++++|+|+++++||++||..+..+.++...
T Consensus        81 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  160 (266)
T 3oig_A           81 IKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVMPNYNV  160 (266)
T ss_dssp             HHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTTTHH
T ss_pred             HHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccccCCCcch
Confidence            99999999999999998752   356788999999999999999999999999999988899999999999999999999


Q ss_pred             hhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCc----hhhhhhccCCCCCchhhhccc
Q 027248          160 YGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND----GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       160 Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~----~~~~~~~~~~~~~p~~~a~av  225 (226)
                      |++||+|+++|+++|+.|+++ ||+||+|+||+++|++........    .+....+..++.+|+|+|+++
T Consensus       161 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~v  231 (266)
T 3oig_A          161 MGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPLRRTTTPEEVGDTA  231 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence            999999999999999999998 999999999999999887764422    233455667889999999875

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=100.00  E-value=7.3e-44  Score=286.34  Aligned_cols=215  Identities=30%  Similarity=0.507  Sum_probs=190.8

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEec-CcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSR-KQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      ++||+++||||++|||++++++|+++|++|++++| ++++++...+++.+.+.++.++.+|++++++++++++++.+.++
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFG   81 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            57899999999999999999999999999999999 77788888888877677888999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa  166 (226)
                      ++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|++  .++||++||..+..+.++...|++||++
T Consensus        82 ~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a  160 (246)
T 2uvd_A           82 QVDILVNNAGVTK-DNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAG  160 (246)
T ss_dssp             CCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTBHHHHHHHHH
T ss_pred             CCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCCCCchHHHHHHH
Confidence            9999999999875 567888999999999999999999999999999953  4799999999988888999999999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC--chhhhhhccCCCCCchhhhccc
Q 027248          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN--DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       167 ~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +++|+++|+.|+.+ ||+||+|+||+++|++.......  ..+....+..++.+|+|+|+++
T Consensus       161 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~  222 (246)
T 2uvd_A          161 VIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLDENIKAEMLKLIPAAQFGEAQDIANAV  222 (246)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCCTTHHHHHHHTCTTCSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            99999999999988 99999999999999987654221  1122334556789999999865

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=100.00  E-value=1.5e-43  Score=285.00  Aligned_cols=215  Identities=28%  Similarity=0.423  Sum_probs=178.9

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCc-chHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ-KNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      ..+++||+++||||++|||++++++|+++|++|++++|++ ++++.   ++.+.+.++.++.+|++++++++++++++.+
T Consensus         2 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (249)
T 2ew8_A            2 TQRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRNLGRRVLTVKCDVSQPGDVEAFGKQVIS   78 (249)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            3457899999999999999999999999999999999998 65554   3444466788999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHh
Q 027248           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVT  163 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~s  163 (226)
                      +++++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|++  .++||++||..+..+.++...|++|
T Consensus        79 ~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  157 (249)
T 2ew8_A           79 TFGRCDILVNNAGIYP-LIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYIST  157 (249)
T ss_dssp             HHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHH
T ss_pred             HcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCchhHHHH
Confidence            9999999999999875 567888999999999999999999999999999954  4799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCccc-ccccC-chhhhh--hccCCCCCchhhhccc
Q 027248          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAE-YITSN-DGVVSS--VSSLKLSPPSSLTLAV  225 (226)
Q Consensus       164 Kaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~-~~~~~-~~~~~~--~~~~~~~~p~~~a~av  225 (226)
                      |+++++|+++|+.|+++ ||+||+|+||+++|++.. ..... ......  .+..++.+|+|+|+++
T Consensus       158 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~~  224 (249)
T 2ew8_A          158 KAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAA  224 (249)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------CTTSSSCSCCCTHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccchhhHHHHhhCccCCCCCHHHHHHHH
Confidence            99999999999999988 999999999999999876 33211 111111  3456788999999865

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=100.00  E-value=3e-44  Score=291.88  Aligned_cols=213  Identities=23%  Similarity=0.287  Sum_probs=184.5

Q ss_pred             cccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus         6 ~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      |..++.+|+++||||++|||++++++|+++|++|++++|+.++++...      ..++.++.+|++++++++++++++.+
T Consensus        10 m~~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~------~~~~~~~~~Dv~d~~~v~~~~~~~~~   83 (266)
T 3p19_A           10 MGRGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALN------LPNTLCAQVDVTDKYTFDTAITRAEK   83 (266)
T ss_dssp             -----CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTC------CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhh------cCCceEEEecCCCHHHHHHHHHHHHH
Confidence            445678999999999999999999999999999999999876654321      23678899999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHh
Q 027248           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVT  163 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~s  163 (226)
                      .+|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|++  .++||++||..+..+.++...|++|
T Consensus        84 ~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~as  162 (266)
T 3p19_A           84 IYGPADAIVNNAGMML-LGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGT  162 (266)
T ss_dssp             HHCSEEEEEECCCCCC-CCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             HCCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCCCCchHHHH
Confidence            9999999999999876 578889999999999999999999999999999954  5899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch---hhh-hhccCCCCCchhhhccc
Q 027248          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG---VVS-SVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       164 Kaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~---~~~-~~~~~~~~~p~~~a~av  225 (226)
                      |+|+++|+++|+.|+++ ||+||+|+||+++|++.........   +.. ..+..++..|+|+|+++
T Consensus       163 K~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~av  229 (266)
T 3p19_A          163 KFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAWRVDMGGVLAADDVARAV  229 (266)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHHHHHHTTCCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhhhHHHHhhcccccCCCCHHHHHHHH
Confidence            99999999999999998 9999999999999999876543221   111 23567789999999875

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=1.7e-43  Score=287.68  Aligned_cols=219  Identities=31%  Similarity=0.461  Sum_probs=192.1

Q ss_pred             cccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHH-HhcCCcEEEEEeeCCCHHHHHHHHHHHH
Q 027248            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKL-KARGIEVIGVVCHVSNGQQRKNLINQTI   84 (226)
Q Consensus         6 ~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (226)
                      ...+++||+++||||++|||++++++|+++|++|++++|++++++...+++ ...+.++.++.+|++++++++++++++.
T Consensus        15 ~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   94 (267)
T 1vl8_A           15 EVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVK   94 (267)
T ss_dssp             --CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            345688999999999999999999999999999999999998888877777 4446678899999999999999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccC-CcCCCCCCchhh
Q 027248           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIA-GYQPQSSMAMYG  161 (226)
Q Consensus        85 ~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~-~~~~~~~~~~Y~  161 (226)
                      ++++++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|++  .++||++||.. +..+.++...|+
T Consensus        95 ~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~  173 (267)
T 1vl8_A           95 EKFGKLDTVVNAAGINR-RHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYA  173 (267)
T ss_dssp             HHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHH
T ss_pred             HHcCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCCCCChhHH
Confidence            99999999999999875 567888999999999999999999999999999965  47999999998 888888999999


Q ss_pred             HhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch----hhhhhccCCCCCchhhhccc
Q 027248          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG----VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       162 ~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~----~~~~~~~~~~~~p~~~a~av  225 (226)
                      +||+++++|+++++.|+++ ||+||+|+||+++|++.........    +....+..++.+|+|+|+++
T Consensus       174 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v  242 (267)
T 1vl8_A          174 ASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVA  242 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccChHHHHHHHhhCCCCCCcCHHHHHHHH
Confidence            9999999999999999988 9999999999999998765432222    22334556789999999865

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=100.00  E-value=2.1e-43  Score=285.75  Aligned_cols=215  Identities=26%  Similarity=0.422  Sum_probs=180.9

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      ++++||+++||||++|||++++++|+++|++|++++|+++++++..+++   +.++.++.+|+++.++++++++++.+++
T Consensus         5 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (261)
T 3n74_A            5 MSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI---GDAALAVAADISKEADVDAAVEAALSKF   81 (261)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHhc
Confidence            4678999999999999999999999999999999999998888877765   5578899999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc------CCEEEEEeccCCcCCCCCCchhh
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK------GSSVVLISSIAGYQPQSSMAMYG  161 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~------~~~iv~~sS~~~~~~~~~~~~Y~  161 (226)
                      +++|+||||||+.....++.+.+.++|++++++|+.++++++++++|+|++      .++||++||..+..+.++...|+
T Consensus        82 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  161 (261)
T 3n74_A           82 GKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYN  161 (261)
T ss_dssp             SCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTTCHHHH
T ss_pred             CCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCCccHHH
Confidence            999999999998764677888899999999999999999999999999954      45799999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC------chhhhhhccCCCCCchhhhccc
Q 027248          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN------DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       162 ~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~------~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +||+|+++|+++|+.|+++ ||+||+|+||+++|++...+...      ..+....+..++.+|+|+|+++
T Consensus       162 asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  232 (261)
T 3n74_A          162 ATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEAA  232 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------CTTSSCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHHHhhcCCcCCCcCHHHHHHHH
Confidence            9999999999999999998 99999999999999998765422      2234455667899999999875

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=100.00  E-value=1.8e-43  Score=287.31  Aligned_cols=218  Identities=24%  Similarity=0.366  Sum_probs=191.7

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      .+++||+++||||++|||++++++|+++|++|++++|++++++...+++.+.  +.++.++.+|++++++++++++++.+
T Consensus         9 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   88 (267)
T 1iy8_A            9 TRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTE   88 (267)
T ss_dssp             -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999998888887777665  56788999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHh
Q 027248           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVT  163 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~s  163 (226)
                      +++++|+||||||+.....++.+.+.++|++++++|+.|+++++++++|.|++  .++||++||..+..+.++...|++|
T Consensus        89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  168 (267)
T 1iy8_A           89 RFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAA  168 (267)
T ss_dssp             HHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHHH
T ss_pred             HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCCCCCccHHHH
Confidence            99999999999998753267888999999999999999999999999999954  5899999999999898999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCccccc--c-cCc-------hhhhhhccCCCCCchhhhccc
Q 027248          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYI--T-SND-------GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       164 Kaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~--~-~~~-------~~~~~~~~~~~~~p~~~a~av  225 (226)
                      |+++++|+++++.|+++ ||+||+|+||+++|++....  . .+.       .+....+..++.+|+|+|+++
T Consensus       169 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v  241 (267)
T 1iy8_A          169 KHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVV  241 (267)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccCCCCCCcCHHHHHHHH
Confidence            99999999999999988 99999999999999986543  1 111       122334556788999999865

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=100.00  E-value=2.7e-43  Score=288.44  Aligned_cols=214  Identities=30%  Similarity=0.437  Sum_probs=184.3

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      +++||+++||||++|||++++++|+++|++|++++|+.+++++..+++   +.++.++.+|++++++++++++++.++++
T Consensus         2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   78 (281)
T 3zv4_A            2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH---GGNAVGVVGDVRSLQDQKRAAERCLAAFG   78 (281)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---BTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHc---CCcEEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            468999999999999999999999999999999999988877665543   56788999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCcc----ccccHHHHHHHHHHHHHHHHHHHHHHhhhhh-cCCEEEEEeccCCcCCCCCCchhhHh
Q 027248           89 KIDVVVSNAAANPSVDSI----LQTKESVLDKLWDINVKSSILLLQDAAPHLQ-KGSSVVLISSIAGYQPQSSMAMYGVT  163 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~----~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~-~~~~iv~~sS~~~~~~~~~~~~Y~~s  163 (226)
                      ++|+||||||+.....++    .+.+.++|++++++|+.|+++++++++|+|+ ++++||++||..+..+.++...|++|
T Consensus        79 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  158 (281)
T 3zv4_A           79 KIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYPNGGGPLYTAT  158 (281)
T ss_dssp             CCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSSSSSCHHHHHH
T ss_pred             CCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccCCCCCchhHHH
Confidence            999999999986433333    3455678999999999999999999999985 46899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCCCeEEEEEecCceeCCccccccc------------CchhhhhhccCCCCCchhhhccc
Q 027248          164 KTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITS------------NDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       164 Kaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~~~~~~------------~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      |+|+++|+++|+.|++++|+||+|+||+++|+|......            ...+....+.+++.+|+|+|.++
T Consensus       159 Kaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v  232 (281)
T 3zv4_A          159 KHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEYTGAY  232 (281)
T ss_dssp             HHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCTTSSCCCGGGGSHHH
T ss_pred             HHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCCCCCCCCHHHHHHHH
Confidence            999999999999999888999999999999998653211            02234556778899999999864

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=100.00  E-value=3.1e-43  Score=284.75  Aligned_cols=218  Identities=44%  Similarity=0.741  Sum_probs=194.1

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      .+++||+++||||++|||++++++|+++|++|++++|++++++...+++.+.+.++.++.+|++++++++.+++++.+.+
T Consensus        10 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   89 (260)
T 2zat_A           10 KPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLH   89 (260)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            45789999999999999999999999999999999999988888888887777788899999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHH
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKT  165 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKa  165 (226)
                      +++|+||||||+.....++.+.+.++|++++++|+.++++++++++|+|++  .++||++||..+..+.++...|++||+
T Consensus        90 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  169 (260)
T 2zat_A           90 GGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKT  169 (260)
T ss_dssp             SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCCCchhHHHHHH
Confidence            999999999998643467788999999999999999999999999999954  479999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch----hhhhhccCCCCCchhhhccc
Q 027248          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG----VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       166 a~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~----~~~~~~~~~~~~p~~~a~av  225 (226)
                      ++++|+++++.|+++ ||+||+|+||+++|++.........    +....+..++..|+|+|+++
T Consensus       170 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v  234 (260)
T 2zat_A          170 ALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIV  234 (260)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSSHHHHHHHHHHHTCSSCBCGGGGHHHH
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccChHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence            999999999999988 9999999999999998765332221    23344567889999999875

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=100.00  E-value=2.9e-43  Score=285.81  Aligned_cols=218  Identities=28%  Similarity=0.432  Sum_probs=188.3

Q ss_pred             ccccCCCEEEEEcCC-CchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcC-CcEEEEEeeCCCHHHHHHHHHHHH
Q 027248            7 AKRFQGKVAIVTAST-QGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG-IEVIGVVCHVSNGQQRKNLINQTI   84 (226)
Q Consensus         7 ~~~~~gk~vlItGa~-~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~   84 (226)
                      ..+++||+++||||+ +|||++++++|+++|++|++++|+.++++...+++.+.+ .++.++.+|++++++++++++++.
T Consensus        17 ~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   96 (266)
T 3o38_A           17 HGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTV   96 (266)
T ss_dssp             CSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHH
Confidence            346889999999998 599999999999999999999999999999888886654 578999999999999999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc---CCEEEEEeccCCcCCCCCCchhh
Q 027248           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYG  161 (226)
Q Consensus        85 ~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~---~~~iv~~sS~~~~~~~~~~~~Y~  161 (226)
                      ++++++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|+|++   .++||++||..+..+.++...|+
T Consensus        97 ~~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~  175 (266)
T 3o38_A           97 EKAGRLDVLVNNAGLGG-QTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYA  175 (266)
T ss_dssp             HHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCTTCHHHH
T ss_pred             HHhCCCcEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCCCCchHH
Confidence            99999999999999876 578889999999999999999999999999999964   46899999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCc---hhhhhhccCCCCCchhhhccc
Q 027248          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND---GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       162 ~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +||+|+++|+++|+.|+++ ||+||+|+||+++|++.+......   .+....+..++.+|+|+|+++
T Consensus       176 ~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~~~dva~~i  243 (266)
T 3o38_A          176 AAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSSELLDRLASDEAFGRAAEPWEVAATI  243 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-----------------CCTTSSCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCcHHHHHHHHhcCCcCCCCCHHHHHHHH
Confidence            9999999999999999988 999999999999999977654332   233445567789999999875

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=100.00  E-value=2.7e-43  Score=285.23  Aligned_cols=215  Identities=28%  Similarity=0.440  Sum_probs=185.0

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcch-HHHHHHHHHhc-CCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN-VDEAVVKLKAR-GIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~-~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      ++||+++||||++|||++++++|+++|++|++++|++++ ++...+++.+. +.++.++.+|++++++++++++++.+.+
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   81 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            578999999999999999999999999999999999887 77777777654 6678889999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHH
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKT  165 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKa  165 (226)
                      +++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++  .++||++||..+..+.++...|++||+
T Consensus        82 g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  160 (260)
T 1x1t_A           82 GRIDILVNNAGIQH-TALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKH  160 (260)
T ss_dssp             SCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCCCCchHHHHHH
Confidence            99999999999875 567888999999999999999999999999999954  479999999999988899999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC---------ch----h-hhhhccCCCCCchhhhccc
Q 027248          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN---------DG----V-VSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       166 a~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~---------~~----~-~~~~~~~~~~~p~~~a~av  225 (226)
                      ++++|+++++.|+++ ||+||+|+||+++|++.+.....         ..    + ....+..++..|+|+|+++
T Consensus       161 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~  235 (260)
T 1x1t_A          161 GVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTA  235 (260)
T ss_dssp             HHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhccCCCCCCcCHHHHHHHH
Confidence            999999999999988 99999999999999987654220         11    1 2334556789999999875

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=100.00  E-value=1.4e-43  Score=287.23  Aligned_cols=218  Identities=28%  Similarity=0.485  Sum_probs=191.7

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhc-CCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      .++++||+++||||++|||++++++|+++|++|++++|++++++...+++.+. +.++.++.+|++++++++++++++.+
T Consensus         2 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (263)
T 3ai3_A            2 DMGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRS   81 (263)
T ss_dssp             CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999998888877777655 66788999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHh
Q 027248           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVT  163 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~s  163 (226)
                      .++++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|++  .++||++||..+..+.++...|++|
T Consensus        82 ~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  160 (263)
T 3ai3_A           82 SFGGADILVNNAGTGS-NETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVT  160 (263)
T ss_dssp             HHSSCSEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             HcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCcchHHHH
Confidence            9999999999999875 567888999999999999999999999999999853  4799999999999888999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCccccccc---------Cch----hhhh-hccCCCCCchhhhccc
Q 027248          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS---------NDG----VVSS-VSSLKLSPPSSLTLAV  225 (226)
Q Consensus       164 Kaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~---------~~~----~~~~-~~~~~~~~p~~~a~av  225 (226)
                      |+++++|+++++.|+++ ||+||+|+||+++|++......         ...    +... .+..++..|+|+|+++
T Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~  237 (263)
T 3ai3_A          161 KAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFF  237 (263)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCTTCSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCCCCCCcCHHHHHHHH
Confidence            99999999999999988 9999999999999998654321         111    1122 4556789999999875

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3e-43  Score=284.12  Aligned_cols=210  Identities=30%  Similarity=0.328  Sum_probs=184.4

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCC--CeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEG--ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      ||+++||||++|||++++++|+++|  ++|++++|++++++...+++   +.++.++.+|++++++++++++++.+++|+
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   78 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY---GDRFFYVVGDITEDSVLKQLVNAAVKGHGK   78 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH---GGGEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh---CCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            6999999999999999999999985  78999999998888777665   457889999999999999999999999999


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc-CCEEEEEeccCCcCCCCCCchhhHhHHHHH
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-GSSVVLISSIAGYQPQSSMAMYGVTKTALL  168 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~-~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~  168 (226)
                      +|+||||||+.....++.+.+.++|++++++|+.|+++++++++|+|++ +++||++||..+..+.++...|++||+|++
T Consensus        79 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~  158 (254)
T 3kzv_A           79 IDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTNGNVVFVSSDACNMYFSSWGAYGSSKAALN  158 (254)
T ss_dssp             CCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCSCCCCSSCCSHHHHHHHHHHH
T ss_pred             ccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEcCchhccCCCCcchHHHHHHHHH
Confidence            9999999998754578889999999999999999999999999999964 689999999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCeEEEEEecCceeCCcccccccC-----------chhhhhhccCCCCCchhhhccc
Q 027248          169 GLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSN-----------DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       169 ~~~~~la~e~~~~i~v~~v~Pg~v~t~~~~~~~~~-----------~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +|+++|+.|+ ++|+||+|+||+++|++.+.....           ..+....+..++..|+|+|+++
T Consensus       159 ~~~~~la~e~-~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~dva~~v  225 (254)
T 3kzv_A          159 HFAMTLANEE-RQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSSVPATVY  225 (254)
T ss_dssp             HHHHHHHHHC-TTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHTTC----CHHHHHHH
T ss_pred             HHHHHHHhhc-cCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHhcCCcCCcccHHHHH
Confidence            9999999998 799999999999999998765432           1134455677899999999875

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=1.3e-43  Score=289.70  Aligned_cols=216  Identities=26%  Similarity=0.378  Sum_probs=190.5

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      ++++||+++||||++|||++++++|+++|++|++++|+++++++..+++.+.+ ++.++.+|++++++++++++++.+.+
T Consensus        25 ~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~  103 (276)
T 2b4q_A           25 FSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG-DCQAIPADLSSEAGARRLAQALGELS  103 (276)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSS-CEEECCCCTTSHHHHHHHHHHHHHHC
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-ceEEEEeeCCCHHHHHHHHHHHHHhc
Confidence            45789999999999999999999999999999999999988888877776544 78889999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--C----CEEEEEeccCCcCCCCCCc-hh
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--G----SSVVLISSIAGYQPQSSMA-MY  160 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~----~~iv~~sS~~~~~~~~~~~-~Y  160 (226)
                      +++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|++  .    ++||++||..+..+.++.. .|
T Consensus       104 g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~~~~~~Y  182 (276)
T 2b4q_A          104 ARLDILVNNAGTSW-GAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAY  182 (276)
T ss_dssp             SCCSEEEECCCCCC-CCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCCCSCTTH
T ss_pred             CCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCCCCcccc
Confidence            99999999999876 467788999999999999999999999999999853  3    7999999999988888888 99


Q ss_pred             hHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC--chhhh--hhccCCCCCchhhhccc
Q 027248          161 GVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN--DGVVS--SVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       161 ~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~--~~~~~--~~~~~~~~~p~~~a~av  225 (226)
                      ++||+++++|+++++.|+++ ||+||+|+||+++|++.......  ..+..  ..+..++.+|+|+|+++
T Consensus       183 ~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v  252 (276)
T 2b4q_A          183 GPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIANDPQALEADSASIPMGRWGRPEEMAALA  252 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHHCHHHHHHHHHTSTTSSCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcchhHHHHHHhhcCCCCCCcCCHHHHHHHH
Confidence            99999999999999999988 99999999999999987654322  11222  44556789999999875

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=100.00  E-value=1.4e-43  Score=288.50  Aligned_cols=218  Identities=23%  Similarity=0.334  Sum_probs=189.5

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCc-chHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ-KNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      .++++||+++||||++|||++++++|+++|++|++++|+. +..+...+++.+.+.++.++.+|++++++++++++++.+
T Consensus        24 ~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~  103 (271)
T 4iin_A           24 AMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQ  103 (271)
T ss_dssp             CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            4568899999999999999999999999999999999954 455666677777788899999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHh
Q 027248           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVT  163 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~s  163 (226)
                      .++++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|+|++  .++||++||..+..+.++...|++|
T Consensus       104 ~~g~id~li~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  182 (271)
T 4iin_A          104 SDGGLSYLVNNAGVVR-DKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTNYSAS  182 (271)
T ss_dssp             HHSSCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHH
T ss_pred             hcCCCCEEEECCCcCC-CcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCCCchHhHHH
Confidence            9999999999999876 577888999999999999999999999999999954  4799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC--chhhhhhccCCCCCchhhhccc
Q 027248          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN--DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       164 Kaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      |+|+++|+++|+.|+++ +|+||+|+||+++|++.+.....  ..+....+..++.+|+|+|+++
T Consensus       183 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~i  247 (271)
T 4iin_A          183 KGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDELKADYVKNIPLNRLGSAKEVAEAV  247 (271)
T ss_dssp             HHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC------------CGGGCTTCSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcHHHHHHHHhcCCcCCCcCHHHHHHHH
Confidence            99999999999999987 99999999999999998765433  2344556777899999999875

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=100.00  E-value=2.5e-43  Score=285.37  Aligned_cols=216  Identities=23%  Similarity=0.363  Sum_probs=186.9

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      ++++||+++||||++|||++++++|+++|++|++++|++++++...+++...  +.++.++.+|++++++++.+++++.+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (260)
T 2z1n_A            3 LGIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARD   82 (260)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999998888877777643  33788899999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHh
Q 027248           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVT  163 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~s  163 (226)
                      +++ +|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|++  .++||++||..+..+.++...|++|
T Consensus        83 ~~g-id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  160 (260)
T 2z1n_A           83 LGG-ADILVYSTGGPR-PGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIM  160 (260)
T ss_dssp             TTC-CSEEEECCCCCC-CBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             hcC-CCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCchhHHH
Confidence            998 999999999865 567888999999999999999999999999999854  4799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCccc----------ccccC---chhhhhhccCCCCCchhhhccc
Q 027248          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAE----------YITSN---DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       164 Kaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~----------~~~~~---~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      |+++++|+++++.|+++ ||+||+|+||+++|++..          .....   ..+....+..++.+|+|+|+++
T Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v  236 (260)
T 2z1n_A          161 RLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELASVV  236 (260)
T ss_dssp             THHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------CCTTSSCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcCCCCCccCHHHHHHHH
Confidence            99999999999999988 999999999999999876          22111   1122334556788999999865

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=100.00  E-value=2.2e-43  Score=285.42  Aligned_cols=213  Identities=31%  Similarity=0.425  Sum_probs=189.1

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcch--HHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN--VDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      ||+++||||++|||++++++|+++|++|++++|++++  ++...+++...+.++.++.+|++++++++++++++.+.+++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG   81 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            6999999999999999999999999999999999887  77777777766778899999999999999999999999999


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--C-CEEEEEeccCCcCCCCCCchhhHhHHH
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--G-SSVVLISSIAGYQPQSSMAMYGVTKTA  166 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~-~~iv~~sS~~~~~~~~~~~~Y~~sKaa  166 (226)
                      +|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|+|++  . ++||++||..+..+.++...|++||++
T Consensus        82 iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  160 (258)
T 3a28_C           82 FDVLVNNAGIAQ-IKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFA  160 (258)
T ss_dssp             CCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCEEEECCCCCC-CCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCCCchhHHHHHHH
Confidence            999999999875 567888999999999999999999999999999853  4 899999999999899999999999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccc-------cC--ch----hhhhhccCCCCCchhhhccc
Q 027248          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYIT-------SN--DG----VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       167 ~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~-------~~--~~----~~~~~~~~~~~~p~~~a~av  225 (226)
                      +++|+++++.|+++ ||+||+|+||+++|++.+...       ..  ..    +....+..++.+|+|+|+++
T Consensus       161 ~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v  233 (258)
T 3a28_C          161 VRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLV  233 (258)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTCTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhcCCCCCccCHHHHHHHH
Confidence            99999999999988 999999999999999876532       11  11    22234556789999999875

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=100.00  E-value=3e-43  Score=284.31  Aligned_cols=213  Identities=30%  Similarity=0.421  Sum_probs=189.7

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id   91 (226)
                      +|+++||||++|||++++++|+++|++|++++|++++++...+++...+.++.++.+|++++++++++++++.+.++++|
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   81 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            68999999999999999999999999999999999888888888877777888999999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc---CCEEEEEeccCCcCCCCCCchhhHhHHHHH
Q 027248           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALL  168 (226)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~---~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~  168 (226)
                      +||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|++   .++||++||..+..+.++...|++||++++
T Consensus        82 ~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~  160 (256)
T 1geg_A           82 VIVNNAGVAP-STPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVR  160 (256)
T ss_dssp             EEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred             EEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCchhHHHHHHHHH
Confidence            9999999875 567888999999999999999999999999999854   479999999999988899999999999999


Q ss_pred             HHHHHHHHHhCC-CeEEEEEecCceeCCcccccc----------cC---chhhhhhccCCCCCchhhhccc
Q 027248          169 GLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYIT----------SN---DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       169 ~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~----------~~---~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +|+++|+.|+++ ||+||+|+||+++|++.....          ..   ..+....+..++.+|+|+|+++
T Consensus       161 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v  231 (256)
T 1geg_A          161 GLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACV  231 (256)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            999999999988 999999999999999865431          11   1122334556789999999865

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=100.00  E-value=2.9e-43  Score=289.56  Aligned_cols=213  Identities=27%  Similarity=0.344  Sum_probs=185.9

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEe-cCcchHHHHHHHHH-hcCCcEEEEEeeCCCHH------------
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSS-RKQKNVDEAVVKLK-ARGIEVIGVVCHVSNGQ------------   74 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~-r~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~------------   74 (226)
                      +++||+++||||++|||++++++|+++|++|++++ |++++++...+++. ..+.++.++.+|+++++            
T Consensus         6 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   85 (291)
T 1e7w_A            6 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAP   85 (291)
T ss_dssp             --CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCC
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccccc
Confidence            57899999999999999999999999999999999 99988888888876 55668899999999999            


Q ss_pred             -----HHHHHHHHHHHHhCCCCEEEEcCCCCCCCCcccccc--------------HHHHHHHHHHHHHHHHHHHHHHhhh
Q 027248           75 -----QRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTK--------------ESVLDKLWDINVKSSILLLQDAAPH  135 (226)
Q Consensus        75 -----~v~~~~~~~~~~~~~id~li~nag~~~~~~~~~~~~--------------~~~~~~~~~~N~~~~~~~~~~~~~~  135 (226)
                           +++++++++.+.++++|+||||||+.. ..++.+.+              .++|++++++|+.++++++++++|+
T Consensus        86 ~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  164 (291)
T 1e7w_A           86 VTLFTRCAELVAACYTHWGRCDVLVNNASSFY-PTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHR  164 (291)
T ss_dssp             BCHHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence                 999999999999999999999999875 46677788              8999999999999999999999999


Q ss_pred             hhc--------CCEEEEEeccCCcCCCCCCchhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCc--
Q 027248          136 LQK--------GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND--  204 (226)
Q Consensus       136 l~~--------~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~--  204 (226)
                      |++        .++||++||..+..+.++...|++||+++++|+++|+.|+++ ||+||+|+||+++|++ + . .+.  
T Consensus       165 m~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~-~-~~~~~  241 (291)
T 1e7w_A          165 VAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D-M-PPAVW  241 (291)
T ss_dssp             HHTSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-G-S-CHHHH
T ss_pred             HHhcCCCCCCCCcEEEEEechhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-c-C-CHHHH
Confidence            954        379999999999999999999999999999999999999998 9999999999999999 4 2 211  


Q ss_pred             -hhhhhhccC-CCCCchhhhccc
Q 027248          205 -GVVSSVSSL-KLSPPSSLTLAV  225 (226)
Q Consensus       205 -~~~~~~~~~-~~~~p~~~a~av  225 (226)
                       .+....+.. ++.+|+|+|+++
T Consensus       242 ~~~~~~~p~~~r~~~pedvA~~v  264 (291)
T 1e7w_A          242 EGHRSKVPLYQRDSSAAEVSDVV  264 (291)
T ss_dssp             HHHHTTCTTTTSCBCHHHHHHHH
T ss_pred             HHHHhhCCCCCCCCCHHHHHHHH
Confidence             122233445 788999999875

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=100.00  E-value=1.8e-43  Score=288.76  Aligned_cols=213  Identities=24%  Similarity=0.375  Sum_probs=183.2

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecC------------cchHHHHHHHHHhcCCcEEEEEeeCCCHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRK------------QKNVDEAVVKLKARGIEVIGVVCHVSNGQ   74 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~------------~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~   74 (226)
                      ..+++||++|||||++|||++++++|+++|++|++++|+            .+.++...+++...+.++.++.+|+++++
T Consensus         8 ~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   87 (278)
T 3sx2_A            8 EGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRE   87 (278)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHH
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHH
Confidence            346889999999999999999999999999999999987            56666777777777888999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc---CCEEEEEeccCCc
Q 027248           75 QRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGY  151 (226)
Q Consensus        75 ~v~~~~~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~---~~~iv~~sS~~~~  151 (226)
                      +++++++++.++++++|+||||||+... ..    +.++|++++++|+.|+++++++++|+|++   .++||++||..+.
T Consensus        88 ~v~~~~~~~~~~~g~id~lv~nAg~~~~-~~----~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~  162 (278)
T 3sx2_A           88 SLSAALQAGLDELGRLDIVVANAGIAPM-SA----GDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGL  162 (278)
T ss_dssp             HHHHHHHHHHHHHCCCCEEEECCCCCCC-SS----THHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGT
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCC-CC----CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhc
Confidence            9999999999999999999999998642 21    57899999999999999999999999854   5799999999988


Q ss_pred             CCC----CCCchhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCc-------------hhhhhhccC
Q 027248          152 QPQ----SSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND-------------GVVSSVSSL  213 (226)
Q Consensus       152 ~~~----~~~~~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~-------------~~~~~~~~~  213 (226)
                      .+.    ++...|++||+|+++|+++|+.|+++ ||+||+|+||+|+|++........             .+....+ .
T Consensus       163 ~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~  241 (278)
T 3sx2_A          163 AGVGSADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMP-V  241 (278)
T ss_dssp             SCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTTSCSSS-C
T ss_pred             CCCccCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhhhhhcC-c
Confidence            776    77888999999999999999999998 999999999999999876422111             1122233 5


Q ss_pred             CCCCchhhhccc
Q 027248          214 KLSPPSSLTLAV  225 (226)
Q Consensus       214 ~~~~p~~~a~av  225 (226)
                      ++..|+|+|+++
T Consensus       242 ~~~~p~dvA~~v  253 (278)
T 3sx2_A          242 EVLAPEDVANAV  253 (278)
T ss_dssp             SSBCHHHHHHHH
T ss_pred             CcCCHHHHHHHH
Confidence            788999999875

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=2.2e-43  Score=293.56  Aligned_cols=190  Identities=27%  Similarity=0.436  Sum_probs=175.9

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecC------------cchHHHHHHHHHhcCCcEEEEEeeCCCHHH
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRK------------QKNVDEAVVKLKARGIEVIGVVCHVSNGQQ   75 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~------------~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   75 (226)
                      .+++||++|||||++|||++++++|+++|++|++++|+            .+++++..+++.+.+.++.++.+|++++++
T Consensus        42 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~  121 (317)
T 3oec_A           42 NRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLAS  121 (317)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence            35789999999999999999999999999999999886            556667777777778889999999999999


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc---CCEEEEEeccCCcC
Q 027248           76 RKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQ  152 (226)
Q Consensus        76 v~~~~~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~---~~~iv~~sS~~~~~  152 (226)
                      ++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|++   +++||++||..+..
T Consensus       122 v~~~~~~~~~~~g~iD~lVnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~  200 (317)
T 3oec_A          122 LQAVVDEALAEFGHIDILVSNVGISN-QGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLR  200 (317)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSS
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcC
Confidence            99999999999999999999999876 577889999999999999999999999999999953   47899999999999


Q ss_pred             CCCCCchhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCccc
Q 027248          153 PQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAE  198 (226)
Q Consensus       153 ~~~~~~~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~  198 (226)
                      +.++...|++||+|+++|+++|+.|+++ ||+||+|+||+++|++..
T Consensus       201 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~  247 (317)
T 3oec_A          201 GAPGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMAL  247 (317)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHH
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCcccc
Confidence            9999999999999999999999999998 999999999999999864

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=100.00  E-value=3.9e-43  Score=284.46  Aligned_cols=219  Identities=22%  Similarity=0.278  Sum_probs=187.8

Q ss_pred             cccccCCCEEEEEcCC--CchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHH
Q 027248            6 MAKRFQGKVAIVTAST--QGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQT   83 (226)
Q Consensus         6 ~~~~~~gk~vlItGa~--~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   83 (226)
                      +..+++||+++||||+  +|||++++++|+++|++|++++|+++ .+...+++.+..+.+.++.+|++++++++++++++
T Consensus         2 ~~~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~   80 (261)
T 2wyu_A            2 LTVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEALGGALLFRADVTQDEELDALFAGV   80 (261)
T ss_dssp             EEECCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHH
T ss_pred             CccCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHH
Confidence            4556789999999999  99999999999999999999999875 44455555443334788999999999999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCC---CCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchh
Q 027248           84 IEKFGKIDVVVSNAAANPS---VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMY  160 (226)
Q Consensus        84 ~~~~~~id~li~nag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y  160 (226)
                      .+.++++|+||||||+...   ..++.+.+.++|++++++|+.++++++++++|.|+++++||++||..+..+.++...|
T Consensus        81 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  160 (261)
T 2wyu_A           81 KEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKYNVM  160 (261)
T ss_dssp             HHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTTCHHH
T ss_pred             HHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCCCCCchHH
Confidence            9999999999999998642   2567788999999999999999999999999999767899999999999888999999


Q ss_pred             hHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch----hhhhhccCCCCCchhhhccc
Q 027248          161 GVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG----VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       161 ~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~----~~~~~~~~~~~~p~~~a~av  225 (226)
                      ++||+++++|+++++.|+++ ||+||+|+||+++|++.........    +....+..++.+|+|+|+++
T Consensus       161 ~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~v  230 (261)
T 2wyu_A          161 AIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLG  230 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTHHHHHHHHHHHSTTSSCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccccHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence            99999999999999999988 9999999999999998765322111    22334556789999999875

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=100.00  E-value=1.9e-43  Score=287.29  Aligned_cols=215  Identities=28%  Similarity=0.407  Sum_probs=186.6

Q ss_pred             cccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcC--CcEEEEEeeCCCHHHHHHHHHHH
Q 027248            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG--IEVIGVVCHVSNGQQRKNLINQT   83 (226)
Q Consensus         6 ~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~   83 (226)
                      |+++++||+++||||++|||++++++|+++|++|++++|+++++++..+++...+  ..+..+.+|+++++++++++   
T Consensus         4 m~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~---   80 (267)
T 3t4x_A            4 MHMQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVI---   80 (267)
T ss_dssp             CCCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHH---
T ss_pred             cccccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHH---
Confidence            4457899999999999999999999999999999999999999998888887763  45778999999999887665   


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhh
Q 027248           84 IEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYG  161 (226)
Q Consensus        84 ~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~  161 (226)
                       ++++++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++  .++||++||..+..+.++...|+
T Consensus        81 -~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  158 (267)
T 3t4x_A           81 -EKYPKVDILINNLGIFE-PVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEMAHYS  158 (267)
T ss_dssp             -HHCCCCSEEEECCCCCC-CCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCTTCHHHH
T ss_pred             -HhcCCCCEEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCCcchHHH
Confidence             45789999999999876 577889999999999999999999999999999954  47999999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC---------chhh--------hhhccCCCCCchhhhc
Q 027248          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN---------DGVV--------SSVSSLKLSPPSSLTL  223 (226)
Q Consensus       162 ~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~---------~~~~--------~~~~~~~~~~p~~~a~  223 (226)
                      +||+|+++|+++|+.|+++ ||+||+|+||+++|++.+.....         ....        ...+.+++..|+|+|+
T Consensus       159 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~  238 (267)
T 3t4x_A          159 ATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPEEIAH  238 (267)
T ss_dssp             HHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSCBCTHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCcccccCccCHHHHHH
Confidence            9999999999999999998 99999999999999976543211         1111        1123478999999998


Q ss_pred             cc
Q 027248          224 AV  225 (226)
Q Consensus       224 av  225 (226)
                      ++
T Consensus       239 ~v  240 (267)
T 3t4x_A          239 LV  240 (267)
T ss_dssp             HH
T ss_pred             HH
Confidence            75

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=4.9e-43  Score=289.00  Aligned_cols=216  Identities=30%  Similarity=0.445  Sum_probs=190.8

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCC---cEEEEEeeCCCHHHHHHHHHHHHH
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI---EVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      +++||+++||||++|||++++++|+++|++|++++|++++++...+++.+.+.   ++.++.+|++++++++++++++.+
T Consensus        23 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  102 (297)
T 1xhl_A           23 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA  102 (297)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999988888888877665   788999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCc--cccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc-CCEEEEEeccCCcCCC-CCCchhh
Q 027248           86 KFGKIDVVVSNAAANPSVDS--ILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-GSSVVLISSIAGYQPQ-SSMAMYG  161 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~--~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~-~~~iv~~sS~~~~~~~-~~~~~Y~  161 (226)
                      +++++|+||||||+.. ..+  +.+.+.++|++++++|+.|+++++++++|.|++ +++||++||..+..+. ++...|+
T Consensus       103 ~~g~iD~lvnnAG~~~-~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~~Y~  181 (297)
T 1xhl_A          103 KFGKIDILVNNAGANL-ADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYA  181 (297)
T ss_dssp             HHSCCCEEEECCCCCC-CCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTSHHHH
T ss_pred             hcCCCCEEEECCCcCc-CCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCEEEEEcCchhccCCCCCcchHH
Confidence            9999999999999865 345  788999999999999999999999999999853 4899999999998887 8899999


Q ss_pred             HhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC-----------chhhhhhccCCCCCchhhhccc
Q 027248          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN-----------DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       162 ~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~-----------~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +||+|+++|+++++.|+++ ||+||+|+||+++|++.......           ..+....+..++.+|+|+|+++
T Consensus       182 asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v  257 (297)
T 1xhl_A          182 CAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANII  257 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            9999999999999999988 99999999999999987654201           0112224556789999999875

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=100.00  E-value=1.1e-42  Score=279.26  Aligned_cols=212  Identities=25%  Similarity=0.398  Sum_probs=189.7

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcC-CcEEEEEeeC--CCHHHHHHHHHHHH
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG-IEVIGVVCHV--SNGQQRKNLINQTI   84 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv--~~~~~v~~~~~~~~   84 (226)
                      ..++||+++||||++|||++++++|+++|++|++++|++++++...+++...+ .+..++.+|+  ++.++++++++++.
T Consensus        10 ~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~   89 (247)
T 3i1j_A           10 ELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVE   89 (247)
T ss_dssp             TTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHH
Confidence            45889999999999999999999999999999999999999999988887765 4667777877  99999999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhH
Q 027248           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGV  162 (226)
Q Consensus        85 ~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~  162 (226)
                      +.++++|+||||||+.....++.+.+.++|++++++|+.|+++++++++|+|++  .++||++||..+..+.++...|++
T Consensus        90 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  169 (247)
T 3i1j_A           90 HEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAYGV  169 (247)
T ss_dssp             HHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             HhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCCCcchhHH
Confidence            999999999999998755678899999999999999999999999999999965  479999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCC--CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          163 TKTALLGLTKALAAEMAP--DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       163 sKaa~~~~~~~la~e~~~--~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ||+|+++|+++|+.|+.+  +|+||+|+||+++|++.........      ..+...|+|+|+++
T Consensus       170 sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~------~~~~~~p~dva~~~  228 (247)
T 3i1j_A          170 SKFATEGLMQTLADELEGVTAVRANSINPGATRTGMRAQAYPDEN------PLNNPAPEDIMPVY  228 (247)
T ss_dssp             HHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHHHHSTTSC------GGGSCCGGGGTHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccchhcccccC------ccCCCCHHHHHHHH
Confidence            999999999999999953  9999999999999998766543322      23467899999865

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=6.2e-43  Score=286.02  Aligned_cols=216  Identities=29%  Similarity=0.430  Sum_probs=189.6

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCC---cEEEEEeeCCCHHHHHHHHHHHHH
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI---EVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      +++||+++||||++|||++++++|+++|++|++++|++++++...+++...+.   ++.++.+|++++++++++++++.+
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (280)
T 1xkq_A            3 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   82 (280)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHH
Confidence            46799999999999999999999999999999999999888888888876655   788999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCc----cccccHHHHHHHHHHHHHHHHHHHHHHhhhhh-cCCEEEEEeccCCcCCC-CCCch
Q 027248           86 KFGKIDVVVSNAAANPSVDS----ILQTKESVLDKLWDINVKSSILLLQDAAPHLQ-KGSSVVLISSIAGYQPQ-SSMAM  159 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~----~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~-~~~~iv~~sS~~~~~~~-~~~~~  159 (226)
                      +++++|+||||||+.. ..+    +.+.+.++|++++++|+.++++++++++|.|+ ++++||++||..+..+. ++...
T Consensus        83 ~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  161 (280)
T 1xkq_A           83 QFGKIDVLVNNAGAAI-PDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLY  161 (280)
T ss_dssp             HHSCCCEEEECCCCCC-CCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCCSSHH
T ss_pred             hcCCCCEEEECCCCCC-CCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCCCcEEEecCccccCCCCCcccH
Confidence            9999999999999875 344    77889999999999999999999999999985 34899999999998887 88999


Q ss_pred             hhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC-----------chhhhhhccCCCCCchhhhccc
Q 027248          160 YGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN-----------DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       160 Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~-----------~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      |++||+++++|+++++.|+++ ||+||+|+||+++|++.......           ..+....+..++.+|+|+|+++
T Consensus       162 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pedvA~~v  239 (280)
T 1xkq_A          162 YAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANII  239 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcCCCCCCCCCHHHHHHHH
Confidence            999999999999999999988 99999999999999987654101           0111223556789999999875

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=100.00  E-value=1.4e-42  Score=291.63  Aligned_cols=212  Identities=23%  Similarity=0.343  Sum_probs=190.3

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcch-------HHHHHHHHHhcCCcEEEEEeeCCCHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN-------VDEAVVKLKARGIEVIGVVCHVSNGQQRKNL   79 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   79 (226)
                      ..+++||+++||||++|||++++++|+++|++|++++|+.++       ++...+++.+.+.++.++.+|++++++++++
T Consensus        40 ~~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~  119 (346)
T 3kvo_A           40 TGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAA  119 (346)
T ss_dssp             CSTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHH
T ss_pred             CCCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHH
Confidence            457899999999999999999999999999999999999875       5677778888788999999999999999999


Q ss_pred             HHHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCC--CC
Q 027248           80 INQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQP--QS  155 (226)
Q Consensus        80 ~~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~--~~  155 (226)
                      ++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++  .++||++||..+..+  .+
T Consensus       120 ~~~~~~~~g~iDilVnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~~~  198 (346)
T 3kvo_A          120 VEKAIKKFGGIDILVNNASAIS-LTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFK  198 (346)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGGTS
T ss_pred             HHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCCCC
Confidence            9999999999999999999876 578889999999999999999999999999999965  379999999998877  78


Q ss_pred             CCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCc-eeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          156 SMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGF-VPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       156 ~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +...|++||+|+++|+++|+.|++.+|+||+|+||+ ++|++.+.+....      +..++.+|+|+|+++
T Consensus       199 ~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T~~~~~~~~~~------~~~r~~~pedvA~~v  263 (346)
T 3kvo_A          199 QHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHTAAMDMLGGPG------IESQCRKVDIIADAA  263 (346)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCCHHHHHHCC--------CGGGCBCTHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCccccHHHHhhcccc------ccccCCCHHHHHHHH
Confidence            899999999999999999999998899999999995 9999876543322      345678999999875

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=1.6e-43  Score=290.09  Aligned_cols=214  Identities=25%  Similarity=0.356  Sum_probs=184.9

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecC------------cchHHHHHHHHHhcCCcEEEEEeeCCCHHH
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRK------------QKNVDEAVVKLKARGIEVIGVVCHVSNGQQ   75 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~------------~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   75 (226)
                      .+++||+++||||++|||++++++|+++|++|++++|+            .+.++....++...+.++.++.+|++++++
T Consensus         6 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   85 (287)
T 3pxx_A            6 GRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAA   85 (287)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHH
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHH
Confidence            36789999999999999999999999999999999998            556667777777778889999999999999


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCC-
Q 027248           76 RKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQ-  154 (226)
Q Consensus        76 v~~~~~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~-  154 (226)
                      ++++++++.++++++|+||||||+... .  .+.+.++|++++++|+.|+++++++++|+|++.++||++||..+..+. 
T Consensus        86 v~~~~~~~~~~~g~id~lv~nAg~~~~-~--~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~  162 (287)
T 3pxx_A           86 VSRELANAVAEFGKLDVVVANAGICPL-G--AHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAA  162 (287)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCC-C--TTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCcCcc-c--CcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhccccc
Confidence            999999999999999999999998752 2  347889999999999999999999999999888999999999877554 


Q ss_pred             ----------CCCchhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCccccccc---------Cch---------
Q 027248          155 ----------SSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS---------NDG---------  205 (226)
Q Consensus       155 ----------~~~~~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~---------~~~---------  205 (226)
                                ++...|++||+++++|+++|+.|+++ ||+||+|+||+++|++.+....         ...         
T Consensus       163 ~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (287)
T 3pxx_A          163 QPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAFP  242 (287)
T ss_dssp             CCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHGG
T ss_pred             ccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccccchhHHHHhhhh
Confidence                      66788999999999999999999998 9999999999999998764210         000         


Q ss_pred             hhhhhccCCCCCchhhhccc
Q 027248          206 VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       206 ~~~~~~~~~~~~p~~~a~av  225 (226)
                      ....++ .++..|+|+|+++
T Consensus       243 ~~~~~~-~~~~~p~dva~~v  261 (287)
T 3pxx_A          243 AMQAMP-TPYVEASDISNAV  261 (287)
T ss_dssp             GGCSSS-CSCBCHHHHHHHH
T ss_pred             hhcccC-CCCCCHHHHHhhH
Confidence            112222 6788999999875

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=100.00  E-value=5.3e-43  Score=282.65  Aligned_cols=213  Identities=24%  Similarity=0.328  Sum_probs=186.0

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      +++||+++||||++|||++++++|+++|++|++++|++++++...+++   +.++.++.+|++++++++++++++.++++
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDAARYQHLDVTIEEDWQRVVAYAREEFG   78 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence            367899999999999999999999999999999999988777665554   44688899999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa  166 (226)
                      ++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|++  .++||++||..+..+.++...|++||++
T Consensus        79 ~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a  157 (254)
T 1hdc_A           79 SVDGLVNNAGIST-GMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWG  157 (254)
T ss_dssp             CCCEEEECCCCCC-CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCchhHHHHHHH
Confidence            9999999999875 567888999999999999999999999999999964  5799999999999888999999999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC--chhhhhhccCCCC-Cchhhhccc
Q 027248          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN--DGVVSSVSSLKLS-PPSSLTLAV  225 (226)
Q Consensus       167 ~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~-~p~~~a~av  225 (226)
                      +++|+++++.|+.+ ||+||+|+||+++|++.+.....  ..+....+..++. +|+|+|+++
T Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~~dvA~~v  220 (254)
T 1hdc_A          158 VRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAV  220 (254)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCSTTSCTTSTTSSCB-CHHHHHHHH
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEecccCcCccccccchhHHHHHHhcCCCCCCCCCHHHHHHHH
Confidence            99999999999988 99999999999999987653211  1122233445677 999999865

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=100.00  E-value=6.9e-43  Score=281.52  Aligned_cols=215  Identities=30%  Similarity=0.449  Sum_probs=163.8

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      ++++||+++||||++|||++++++|+++|++|++++|++++++...+++.+.+.++.++.+|++++++++++++++.+.+
T Consensus         5 ~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (253)
T 3qiv_A            5 MRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEF   84 (253)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            45789999999999999999999999999999999999999999999998888889999999999999999999999999


Q ss_pred             CCCCEEEEcCCCCC--CCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHh
Q 027248           88 GKIDVVVSNAAANP--SVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVT  163 (226)
Q Consensus        88 ~~id~li~nag~~~--~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~s  163 (226)
                      +++|+||||||+..  ...++.+.+.++|++++++|+.++++++++++|.|++  .++||++||..++   ++...|++|
T Consensus        85 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~---~~~~~Y~as  161 (253)
T 3qiv_A           85 GGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAW---LYSNYYGLA  161 (253)
T ss_dssp             SCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC--------------CC
T ss_pred             CCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCcccc---CCCchhHHH
Confidence            99999999999852  2445678899999999999999999999999999954  5799999999876   456789999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCc---hhhhhhccCCCCCchhhhccc
Q 027248          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND---GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       164 Kaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~p~~~a~av  225 (226)
                      |+|+++|+++|+.|+.+ ||+|++|+||+++|++.+......   .+.+..+..++.+|+|+|+++
T Consensus       162 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  227 (253)
T 3qiv_A          162 KVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPKEMVDDIVKGLPLSRMGTPDDLVGMC  227 (253)
T ss_dssp             HHHHHHHHHHHHHHTTTTTEEEEEEEC-------------------------------CCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcHHHHHHHhccCCCCCCCCHHHHHHHH
Confidence            99999999999999988 999999999999999877654332   234455666788999999865

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=100.00  E-value=1.2e-42  Score=281.50  Aligned_cols=212  Identities=25%  Similarity=0.372  Sum_probs=186.3

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      ..+++||+++||||++|||++++++|+++|++|++++|++++++...+++..   ++.++.+|++++++++++++++.++
T Consensus         2 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~D~~~~~~v~~~~~~~~~~   78 (260)
T 1nff_A            2 SGRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELAD---AARYVHLDVTQPAQWKAAVDTAVTA   78 (260)
T ss_dssp             CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGG---GEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc---CceEEEecCCCHHHHHHHHHHHHHH
Confidence            3457899999999999999999999999999999999998887776665532   4778999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhH
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTK  164 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sK  164 (226)
                      +|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|++  .++||++||..+..+.++...|++||
T Consensus        79 ~g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  157 (260)
T 1nff_A           79 FGGLHVLVNNAGILN-IGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATK  157 (260)
T ss_dssp             HSCCCEEEECCCCCC-CBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             cCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCCCchhHHHHH
Confidence            999999999999875 567788999999999999999999999999999954  57999999999998889999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       165 aa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +++++|+++++.|+++ ||+||+|+||+++|++.. . ....+. ..+..++.+|+|+|+++
T Consensus       158 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-~-~~~~~~-~~~~~~~~~~~dvA~~v  216 (260)
T 1nff_A          158 FAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD-W-VPEDIF-QTALGRAAEPVEVSNLV  216 (260)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT-T-SCTTCS-CCSSSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc-c-chhhHH-hCccCCCCCHHHHHHHH
Confidence            9999999999999988 999999999999999865 2 112221 33456788999999865

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=4.9e-43  Score=282.86  Aligned_cols=217  Identities=24%  Similarity=0.335  Sum_probs=192.5

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEe-cCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSS-RKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      ...++|+++||||++|||++++++|+++|++|++++ |+.++.+...+++.+.+.++.++.+|+++.++++++++++.++
T Consensus         9 ~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   88 (256)
T 3ezl_A            9 MVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAE   88 (256)
T ss_dssp             ----CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHh
Confidence            457899999999999999999999999999999888 7777888888888887888999999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhH
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTK  164 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sK  164 (226)
                      ++++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++  .++||++||..+..+.++...|++||
T Consensus        89 ~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  167 (256)
T 3ezl_A           89 VGEIDVLVNNAGITR-DVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAK  167 (256)
T ss_dssp             TCCEEEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCSCCHHHHHHH
T ss_pred             cCCCCEEEECCCCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCCCCcccHHHH
Confidence            999999999999876 567888999999999999999999999999999854  47999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC--chhhhhhccCCCCCchhhhccc
Q 027248          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN--DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       165 aa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +|+++|+++|+.|+.+ ||+|++|+||+++|++.+.....  ..+....+..++.+|+|+|+++
T Consensus       168 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  231 (256)
T 3ezl_A          168 AGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATIPVRRLGSPDEIGSIV  231 (256)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHHHSTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            9999999999999988 99999999999999988765322  2234455667888999999865

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=100.00  E-value=6.1e-43  Score=283.89  Aligned_cols=216  Identities=19%  Similarity=0.240  Sum_probs=185.3

Q ss_pred             ccCCCEEEEEcCC--CchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            9 RFQGKVAIVTAST--QGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         9 ~~~gk~vlItGa~--~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      +++||+++||||+  +|||++++++|+++|++|++++|++ +.++..+++.+..+...++.+|++++++++++++++.++
T Consensus         6 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   84 (265)
T 1qsg_A            6 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKV   84 (265)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHH
Confidence            4789999999999  9999999999999999999999988 455555555544334478899999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCC---CCcccc-ccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhH
Q 027248           87 FGKIDVVVSNAAANPS---VDSILQ-TKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGV  162 (226)
Q Consensus        87 ~~~id~li~nag~~~~---~~~~~~-~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~  162 (226)
                      ++++|+||||||+...   ..++.+ .+.++|++++++|+.++++++++++|+|+++++||++||..+..+.++...|++
T Consensus        85 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  164 (265)
T 1qsg_A           85 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGL  164 (265)
T ss_dssp             CSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTTTHHHH
T ss_pred             cCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCCCCchHHHH
Confidence            9999999999998642   256677 889999999999999999999999999977789999999999988899999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch----hhhhhccCCCCCchhhhccc
Q 027248          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG----VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       163 sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~----~~~~~~~~~~~~p~~~a~av  225 (226)
                      ||+++++|+++++.|+++ ||+||+|+||+++|++.+.......    +....+..++.+|+|+|+++
T Consensus       165 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~v  232 (265)
T 1qsg_A          165 AKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSA  232 (265)
T ss_dssp             HHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccccHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence            999999999999999988 9999999999999998765322111    12233556788999999875

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=1e-42  Score=279.58  Aligned_cols=210  Identities=23%  Similarity=0.366  Sum_probs=183.1

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      +++||+++||||++|||++++++|+++|++|++++|++++++...+++   +  +.++.+|++++++++++++++.++++
T Consensus         2 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~D~~~~~~~~~~~~~~~~~~g   76 (245)
T 1uls_A            2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV---G--AHPVVMDVADPASVERGFAEALAHLG   76 (245)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---T--CEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---C--CEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            357899999999999999999999999999999999987766655433   2  67889999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa  166 (226)
                      ++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|+|++  .++||++||.. ..+.++...|++||++
T Consensus        77 ~id~lvn~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~~~~~~~~Y~asK~a  154 (245)
T 1uls_A           77 RLDGVVHYAGITR-DNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGNLGQANYAASMAG  154 (245)
T ss_dssp             SCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCCTTCHHHHHHHHH
T ss_pred             CCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hcCCCCchhHHHHHHH
Confidence            9999999999875 567888999999999999999999999999999965  47999999998 7788899999999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC--chhhhhhccCCCCCchhhhccc
Q 027248          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN--DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       167 ~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +++|+++++.|+.+ ||+||+|+||+++|++.......  ..+....+..++.+|+|+|+++
T Consensus       155 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v  216 (245)
T 1uls_A          155 VVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVREKAIAATPLGRAGKPLEVAYAA  216 (245)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHHHHHHHTCTTCSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhcCHHHHHHHHhhCCCCCCcCHHHHHHHH
Confidence            99999999999988 99999999999999987653211  1122334556788999999865

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=100.00  E-value=6.9e-43  Score=284.21  Aligned_cols=215  Identities=22%  Similarity=0.349  Sum_probs=189.4

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEe-cCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSS-RKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      +++|+++||||++|||++++++|+++|++|++++ |+.+..+....++...+.++.++.+|+++.++++++++++.+.++
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  102 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFG  102 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999999999999999999998 555566666667766677899999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa  166 (226)
                      ++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|+|++  .++||++||..+..+.++.+.|++||+|
T Consensus       103 ~id~li~nAg~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  181 (269)
T 3gk3_A          103 KVDVLINNAGITR-DATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAG  181 (269)
T ss_dssp             CCSEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHHHH
T ss_pred             CCCEEEECCCcCC-CcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCCCcchHHHHHHH
Confidence            9999999999876 567888999999999999999999999999999843  5799999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCc---hhhhhhccCCCCCchhhhccc
Q 027248          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND---GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       167 ~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +++|+++|+.|+.+ ||+||+|+||+++|++.+......   .+....+..++.+|+|+|+++
T Consensus       182 ~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v  244 (269)
T 3gk3_A          182 IHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQDVLEAKILPQIPVGRLGRPDEVAALI  244 (269)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC-------CCSGGGCTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhchhHHHHHhhhcCCcCCccCHHHHHHHH
Confidence            99999999999988 999999999999999987654321   344556677888999999875

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=100.00  E-value=6.9e-43  Score=281.61  Aligned_cols=216  Identities=25%  Similarity=0.399  Sum_probs=193.7

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEE-ecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      .++||+++||||++|||++++++|+++|++|+++ .|+.+..+...+++...+.++.++.+|+++.++++.+++++.+.+
T Consensus         4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (255)
T 3icc_A            4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNEL   83 (255)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHh
Confidence            3679999999999999999999999999998875 777888888888888888889999999999999999999988876


Q ss_pred             C------CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhh
Q 027248           88 G------KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYG  161 (226)
Q Consensus        88 ~------~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~  161 (226)
                      +      ++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|+|++.++||++||..+..+.++...|+
T Consensus        84 ~~~~~~~~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  162 (255)
T 3icc_A           84 QNRTGSTKFDILINNAGIGP-GAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDFIAYS  162 (255)
T ss_dssp             HHHHSSSCEEEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSCCTTBHHHH
T ss_pred             cccccCCcccEEEECCCCCC-CCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccCCCCcchhH
Confidence            4      4999999999875 67788899999999999999999999999999998788999999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchh----hhhhccCCCCCchhhhccc
Q 027248          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGV----VSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       162 ~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~----~~~~~~~~~~~p~~~a~av  225 (226)
                      +||+|+++|+++|+.|+.+ ||+||+|+||+++|++.+........    ....+..++.+|+|+|+++
T Consensus       163 asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  231 (255)
T 3icc_A          163 MTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTA  231 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHHHHHHHHHTSTTSSCBCHHHHHHHH
T ss_pred             HhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHHHHHhhhccCCcCCCCCHHHHHHHH
Confidence            9999999999999999988 99999999999999998877655432    2334556788999999864

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=100.00  E-value=6e-43  Score=291.56  Aligned_cols=217  Identities=27%  Similarity=0.335  Sum_probs=190.9

Q ss_pred             cccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecC----------cchHHHHHHHHHhcCCcEEEEEeeCCCHHH
Q 027248            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRK----------QKNVDEAVVKLKARGIEVIGVVCHVSNGQQ   75 (226)
Q Consensus         6 ~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~----------~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   75 (226)
                      ++.+++||+++||||++|||++++++|+++|++|++++|+          .+.++...+++...+.++.++.+|++++++
T Consensus        21 ~m~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~  100 (322)
T 3qlj_A           21 SMGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQ  100 (322)
T ss_dssp             -CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHH
T ss_pred             hhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHH
Confidence            3456899999999999999999999999999999999998          778888888888888889999999999999


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--------CCEEEEEec
Q 027248           76 RKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--------GSSVVLISS  147 (226)
Q Consensus        76 v~~~~~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--------~~~iv~~sS  147 (226)
                      ++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++        +++||++||
T Consensus       101 v~~~~~~~~~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS  179 (322)
T 3qlj_A          101 AAGLIQTAVETFGGLDVLVNNAGIVR-DRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSS  179 (322)
T ss_dssp             HHHHHHHHHHHHSCCCEEECCCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcC
Confidence            99999999999999999999999976 578889999999999999999999999999999853        269999999


Q ss_pred             cCCcCCCCCCchhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          148 IAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       148 ~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ..+..+.++...|++||+|+++|+++|+.|+++ ||+||+|+|| ++|++........ ...........+|+|+|+++
T Consensus       180 ~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~-~~~~~~~~~~~~pedva~~v  256 (322)
T 3qlj_A          180 GAGLQGSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEM-MATQDQDFDAMAPENVSPLV  256 (322)
T ss_dssp             HHHHHCBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC---------CCTTCGGGTHHHH
T ss_pred             HHHccCCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhh-hhccccccCCCCHHHHHHHH
Confidence            999999999999999999999999999999998 9999999999 9999887654332 22233344567899999875

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=100.00  E-value=1e-42  Score=284.01  Aligned_cols=216  Identities=22%  Similarity=0.265  Sum_probs=186.8

Q ss_pred             ccCCCEEEEEcCC--CchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            9 RFQGKVAIVTAST--QGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         9 ~~~gk~vlItGa~--~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      +++||+++||||+  +|||++++++|+++|++|++++|+++ .+...+++.+..+.+.++.+|++++++++++++++.+.
T Consensus         3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   81 (275)
T 2pd4_A            3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKD   81 (275)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4678999999999  99999999999999999999999986 45555555544334778999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCC---CCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHh
Q 027248           87 FGKIDVVVSNAAANPS---VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVT  163 (226)
Q Consensus        87 ~~~id~li~nag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~s  163 (226)
                      ++++|+||||||+...   ..++.+.+.++|++++++|+.|+++++++++|.|+++++||++||..+..+.++...|++|
T Consensus        82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  161 (275)
T 2pd4_A           82 LGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLA  161 (275)
T ss_dssp             TSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTCHHHHHH
T ss_pred             cCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCCCCCchhhHHH
Confidence            9999999999998652   2567789999999999999999999999999999777899999999999898999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch----hhhhhccCCCCCchhhhccc
Q 027248          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG----VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       164 Kaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~----~~~~~~~~~~~~p~~~a~av  225 (226)
                      |+|+++|+++|+.|+++ ||+||+|+||+++|++.+.......    +....+..++.+|+|+|+++
T Consensus       162 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~  228 (275)
T 2pd4_A          162 KAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAG  228 (275)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccccHHHHHHHHhcCCcCCCCCHHHHHHHH
Confidence            99999999999999988 9999999999999998765432111    22234556788999999865

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=100.00  E-value=1.6e-42  Score=284.05  Aligned_cols=217  Identities=25%  Similarity=0.426  Sum_probs=189.0

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcch-HHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN-VDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      .+++||+++||||++|||++++++|+++|++|++++|+.++ .+...+++.+.+.++.++.+|+++.++++.+++++.+.
T Consensus        25 ~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  104 (283)
T 1g0o_A           25 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKI  104 (283)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999764 45566677776778999999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCC-CchhhHhHH
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSS-MAMYGVTKT  165 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~-~~~Y~~sKa  165 (226)
                      ++++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++.++||++||..+..+.++ ...|++||+
T Consensus       105 ~g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK~  183 (283)
T 1g0o_A          105 FGKLDIVCSNSGVVS-FGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKG  183 (283)
T ss_dssp             HSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCSSCHHHHHHHH
T ss_pred             cCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCCCCCCcchHHHHH
Confidence            999999999999875 567888999999999999999999999999999976789999999998877664 889999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCceeCCccccccc---------Cch----hhh--hhccCCCCCchhhhccc
Q 027248          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS---------NDG----VVS--SVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       166 a~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~---------~~~----~~~--~~~~~~~~~p~~~a~av  225 (226)
                      ++++|+++|+.|+++ ||+||+|+||+++|++......         ...    +..  ..+..++..|+|+|+++
T Consensus       184 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v  259 (283)
T 1g0o_A          184 AIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVV  259 (283)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCCCCCCcCHHHHHHHH
Confidence            999999999999988 9999999999999998654321         111    112  34556788999999875

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=100.00  E-value=1.3e-42  Score=289.25  Aligned_cols=192  Identities=27%  Similarity=0.435  Sum_probs=174.8

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCC--cEEEEEeeCCCHHHHHHHHHHHHH
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI--EVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      .+++||+++||||++|||++++++|+++|++|++++|+.++++...+++...+.  ++.++.+|++++++++.+++.+.+
T Consensus         4 ~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   83 (319)
T 3ioy_A            4 KDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEA   83 (319)
T ss_dssp             CCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999999999998888877665  789999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--------CCEEEEEeccCCcCCCCCC
Q 027248           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--------GSSVVLISSIAGYQPQSSM  157 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--------~~~iv~~sS~~~~~~~~~~  157 (226)
                      .++++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|.+        .++||++||.++..+.++.
T Consensus        84 ~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~~~  162 (319)
T 3ioy_A           84 RFGPVSILCNNAGVNL-FQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSP  162 (319)
T ss_dssp             HTCCEEEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCSSS
T ss_pred             hCCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCCCC
Confidence            9999999999999876 678899999999999999999999999999999843        6899999999999999999


Q ss_pred             chhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCccccc
Q 027248          158 AMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYI  200 (226)
Q Consensus       158 ~~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~  200 (226)
                      ..|++||+|+++|+++|+.|+.+ ||+|++|+||+|+|++....
T Consensus       163 ~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~  206 (319)
T 3ioy_A          163 GIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASD  206 (319)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-------
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCccccc
Confidence            99999999999999999999988 99999999999999987654

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=100.00  E-value=6e-43  Score=284.66  Aligned_cols=210  Identities=28%  Similarity=0.401  Sum_probs=182.8

Q ss_pred             ccccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHH
Q 027248            5 KMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTI   84 (226)
Q Consensus         5 ~~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (226)
                      ....+++||++|||||++|||++++++|+++|++|++++|+++..          ...+..+.+|++++++++++++++.
T Consensus         7 ~~~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~~~~   76 (269)
T 3vtz_A            7 HHMEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD----------VNVSDHFKIDVTNEEEVKEAVEKTT   76 (269)
T ss_dssp             ---CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C----------TTSSEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc----------cCceeEEEecCCCHHHHHHHHHHHH
Confidence            345678999999999999999999999999999999999988654          1245678999999999999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhH
Q 027248           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGV  162 (226)
Q Consensus        85 ~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~  162 (226)
                      ++++++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++  .++||++||..+..+.++...|++
T Consensus        77 ~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  155 (269)
T 3vtz_A           77 KKYGRIDILVNNAGIEQ-YSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVT  155 (269)
T ss_dssp             HHHSCCCEEEECCCCCC-CCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHH
T ss_pred             HHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCChhHHH
Confidence            99999999999999876 578889999999999999999999999999999854  579999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCcccccccC-------------chhhhhhccCCCCCchhhhccc
Q 027248          163 TKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSN-------------DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       163 sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~~~~~~~-------------~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ||+|+++|+++|+.|++++|+||+|+||+++|++.......             ..+....+..++..|+|+|+++
T Consensus       156 sKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v  231 (269)
T 3vtz_A          156 SKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVV  231 (269)
T ss_dssp             HHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHSTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            99999999999999998899999999999999987543210             1123445677889999999875

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=100.00  E-value=5.6e-43  Score=283.71  Aligned_cols=221  Identities=28%  Similarity=0.381  Sum_probs=187.8

Q ss_pred             CcccccccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHH
Q 027248            1 MEKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLI   80 (226)
Q Consensus         1 ~~~~~~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   80 (226)
                      |+.|+...+++||+++||||++|||++++++|+++|++|++++|++++++...+++.   .++.++.+|+++++++++++
T Consensus         1 ~~~m~~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~D~~d~~~v~~~~   77 (263)
T 3ak4_A            1 GSHMAGIFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLE---NGGFAVEVDVTKRASVDAAM   77 (263)
T ss_dssp             -----CTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCT---TCCEEEECCTTCHHHHHHHH
T ss_pred             CCCcccCcCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh---cCCeEEEEeCCCHHHHHHHH
Confidence            556666677899999999999999999999999999999999999877766554442   25778899999999999999


Q ss_pred             HHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc---CCEEEEEeccCCcCCCCCC
Q 027248           81 NQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSM  157 (226)
Q Consensus        81 ~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~---~~~iv~~sS~~~~~~~~~~  157 (226)
                      +++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|.|++   .++||++||..+..+.++.
T Consensus        78 ~~~~~~~g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  156 (263)
T 3ak4_A           78 QKAIDALGGFDLLCANAGVST-MRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLL  156 (263)
T ss_dssp             HHHHHHHTCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTC
T ss_pred             HHHHHHcCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCCCc
Confidence            999999999999999999875 567888999999999999999999999999999853   4899999999999888999


Q ss_pred             chhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccc-----c-----C---chhhhhhccCCCCCchhhhc
Q 027248          158 AMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYIT-----S-----N---DGVVSSVSSLKLSPPSSLTL  223 (226)
Q Consensus       158 ~~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~-----~-----~---~~~~~~~~~~~~~~p~~~a~  223 (226)
                      ..|++||+++++|+++++.|+++ ||+||+|+||+++|++.....     .     .   ..+....+..++..|+|+|+
T Consensus       157 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~  236 (263)
T 3ak4_A          157 AHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVAD  236 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCTTCSCBCHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcCCCCCCcCHHHHHH
Confidence            99999999999999999999988 999999999999999865432     0     0   11223345567899999998


Q ss_pred             cc
Q 027248          224 AV  225 (226)
Q Consensus       224 av  225 (226)
                      ++
T Consensus       237 ~v  238 (263)
T 3ak4_A          237 VV  238 (263)
T ss_dssp             HH
T ss_pred             HH
Confidence            65

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=100.00  E-value=9.1e-43  Score=283.16  Aligned_cols=219  Identities=21%  Similarity=0.224  Sum_probs=185.5

Q ss_pred             cccccCCCEEEEEcCC--CchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHH
Q 027248            6 MAKRFQGKVAIVTAST--QGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQT   83 (226)
Q Consensus         6 ~~~~~~gk~vlItGa~--~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   83 (226)
                      ...++++|+++||||+  +|||++++++|+++|++|++++|+... .+..+++.+..+++.++.+|++++++++.+++++
T Consensus         8 ~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   86 (271)
T 3ek2_A            8 HMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRF-KDRITEFAAEFGSELVFPCDVADDAQIDALFASL   86 (271)
T ss_dssp             -CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGG-HHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHH
T ss_pred             CccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhh-HHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHH
Confidence            3457889999999999  999999999999999999999999543 4445555555556889999999999999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCC---Ccccc-ccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCch
Q 027248           84 IEKFGKIDVVVSNAAANPSV---DSILQ-TKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAM  159 (226)
Q Consensus        84 ~~~~~~id~li~nag~~~~~---~~~~~-~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~  159 (226)
                      .++++++|+||||||+....   .++.+ .+.++|++++++|+.++++++++++|+|+++++||++||..+..+.++...
T Consensus        87 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  166 (271)
T 3ek2_A           87 KTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAIPNYNT  166 (271)
T ss_dssp             HHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTTTH
T ss_pred             HHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccCCCCccc
Confidence            99999999999999987521   44555 899999999999999999999999999988889999999999999999999


Q ss_pred             hhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch----hhhhhccCCCCCchhhhccc
Q 027248          160 YGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG----VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       160 Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~----~~~~~~~~~~~~p~~~a~av  225 (226)
                      |++||+|+++|+++|+.|+++ ||+||+|+||+++|++.+.......    +....+..++.+|+|+|+++
T Consensus       167 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pedva~~i  237 (271)
T 3ek2_A          167 MGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPLKRNVTIEQVGNAG  237 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHHHHHHHHHHHSTTSSCCCHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchHHHHHHHHhcCCcCCCCCHHHHHHHH
Confidence            999999999999999999988 9999999999999999876543222    33455667889999999875

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=100.00  E-value=4.3e-43  Score=285.11  Aligned_cols=207  Identities=26%  Similarity=0.381  Sum_probs=181.8

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      +.+++||+++||||++|||++++++|+++|++|++++|+.+..+.           ...+.+|+++.++++.+++++.+.
T Consensus        23 m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~-----------~~~~~~Dv~~~~~~~~~~~~~~~~   91 (266)
T 3uxy_A           23 MQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAA-----------DLHLPGDLREAAYADGLPGAVAAG   91 (266)
T ss_dssp             ---CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCC-----------SEECCCCTTSHHHHHHHHHHHHHH
T ss_pred             hhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHh-----------hhccCcCCCCHHHHHHHHHHHHHh
Confidence            457899999999999999999999999999999999998765321           234578999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhH
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTK  164 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sK  164 (226)
                      ++++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++  .++||++||..+..+.++...|++||
T Consensus        92 ~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  170 (266)
T 3uxy_A           92 LGRLDIVVNNAGVIS-RGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYCLTK  170 (266)
T ss_dssp             HSCCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCTTBHHHHHHH
T ss_pred             cCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCChHHHHHH
Confidence            999999999999986 578889999999999999999999999999999964  68999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC---------chhhhhhccCCCCCchhhhccc
Q 027248          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN---------DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       165 aa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~---------~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +|+++|+++|+.|+++ ||+||+|+||+++|++.+.....         ..+....+.+++.+|+|+|+++
T Consensus       171 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v  241 (266)
T 3uxy_A          171 AALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADVV  241 (266)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            9999999999999998 99999999999999987654322         2234455667889999999875

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.6e-42  Score=283.08  Aligned_cols=216  Identities=30%  Similarity=0.462  Sum_probs=178.6

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHH---HhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKL---KARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      +++||+++||||++|||++++++|+++|++|++++|++++++...+++   ...+.++.++.+|++++++++++++++.+
T Consensus         3 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (278)
T 1spx_A            3 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   82 (278)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999998888877777   33345688999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCccccc----cHHHHHHHHHHHHHHHHHHHHHHhhhhhc-CCEEEEEeccCC-cCCCCCCch
Q 027248           86 KFGKIDVVVSNAAANPSVDSILQT----KESVLDKLWDINVKSSILLLQDAAPHLQK-GSSVVLISSIAG-YQPQSSMAM  159 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~~~~~----~~~~~~~~~~~N~~~~~~~~~~~~~~l~~-~~~iv~~sS~~~-~~~~~~~~~  159 (226)
                      ++|++|+||||||+.. ..++.+.    +.++|++++++|+.|+++++++++|.|++ +++||++||..+ ..+.++...
T Consensus        83 ~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  161 (278)
T 1spx_A           83 KFGKLDILVNNAGAAI-PDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPY  161 (278)
T ss_dssp             HHSCCCEEEECCC--------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSCCTTSHH
T ss_pred             HcCCCCEEEECCCCCC-CcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEecccccccCCCCccH
Confidence            9999999999999865 4566677    89999999999999999999999999854 589999999998 888899999


Q ss_pred             hhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC-----------chhhhhhccCCCCCchhhhccc
Q 027248          160 YGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN-----------DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       160 Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~-----------~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      |++||+++++|+++++.|+++ ||+||+|+||+++|++.......           ..+....+..++.+|+|+|+++
T Consensus       162 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v  239 (278)
T 1spx_A          162 YSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVI  239 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCCCcCCCCHHHHHHHH
Confidence            999999999999999999988 99999999999999986543111           1112233456789999999875

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=100.00  E-value=1.6e-42  Score=279.92  Aligned_cols=213  Identities=27%  Similarity=0.400  Sum_probs=186.2

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      ++||+++||||++|||++++++|+++|++|++++|+++  +...+++.+.+.++.++.+|++++++++++++++.+++++
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   79 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGG   79 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999999999887  4556666655667888999999999999999999999999


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHHH
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~  167 (226)
                      +|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|++  .++||++||..+..+.++...|++||+++
T Consensus        80 id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~  158 (255)
T 2q2v_A           80 VDILVNNAGIQH-VAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGV  158 (255)
T ss_dssp             CSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred             CCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCCCchhHHHHHHHH
Confidence            999999999875 567788999999999999999999999999999954  37999999999998889999999999999


Q ss_pred             HHHHHHHHHHhCC-CeEEEEEecCceeCCccccccc---C---------chh-hhhhccCCCCCchhhhccc
Q 027248          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS---N---------DGV-VSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       168 ~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~---~---------~~~-~~~~~~~~~~~p~~~a~av  225 (226)
                      ++|+++++.|+.+ ||+||+|+||+++|++......   .         ..+ ....+..++..|+|+|+++
T Consensus       159 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~  230 (255)
T 2q2v_A          159 VGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELV  230 (255)
T ss_dssp             HHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTTCTTCCCBCHHHHHHHH
T ss_pred             HHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhccCCCCCCcCHHHHHHHH
Confidence            9999999999988 9999999999999998654321   0         111 2233556788999999865

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=100.00  E-value=3e-42  Score=274.90  Aligned_cols=207  Identities=24%  Similarity=0.330  Sum_probs=184.9

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHH-hcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLK-ARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      ++|+++||||++|||++++++|+++|++|++++|+.++++...+++. ..+.++.++.+|++++++++++++++.+.+++
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   80 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGD   80 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence            46999999999999999999999999999999999999988888876 44678999999999999999999999999999


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc-CCEEEEEeccCCcCCCCCCchhhHhHHHHH
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-GSSVVLISSIAGYQPQSSMAMYGVTKTALL  168 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~-~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~  168 (226)
                      +|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++ ++++|++||..+..+.++...|++||++++
T Consensus        81 id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sKaa~~  159 (235)
T 3l77_A           81 VDVVVANAGLGY-FKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLIPYGGGYVSTKWAAR  159 (235)
T ss_dssp             CSEEEECCCCCC-CCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSCCTTCHHHHHHHHHHH
T ss_pred             CCEEEECCcccc-ccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcccCCCcchHHHHHHHHH
Confidence            999999999876 678889999999999999999999999999999954 689999999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          169 GLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       169 ~~~~~la~e~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +|+++|..+ .++|+||+|+||+++|++.........      ..++.+|+|+|+++
T Consensus       160 ~~~~~l~~~-~~~i~v~~v~PG~v~T~~~~~~~~~~~------~~~~~~p~dva~~v  209 (235)
T 3l77_A          160 ALVRTFQIE-NPDVRFFELRPGAVDTYFGGSKPGKPK------EKGYLKPDEIAEAV  209 (235)
T ss_dssp             HHHHHHHHH-CTTSEEEEEEECSBSSSTTTCCSCCCG------GGTCBCHHHHHHHH
T ss_pred             HHHHHHhhc-CCCeEEEEEeCCccccccccccCCccc------ccCCCCHHHHHHHH
Confidence            999999555 349999999999999999876644322      22678999999875

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=100.00  E-value=1.8e-42  Score=282.92  Aligned_cols=216  Identities=29%  Similarity=0.445  Sum_probs=192.0

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      +++||+++||||++|||++++++|+++|++|++++|++++++...+++.+.+.++.++.+|++++++++++++++.+.++
T Consensus        19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   98 (277)
T 2rhc_B           19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYG   98 (277)
T ss_dssp             CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            47899999999999999999999999999999999999888888888877777889999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhh--hhc--CCEEEEEeccCCcCCCCCCchhhHhH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPH--LQK--GSSVVLISSIAGYQPQSSMAMYGVTK  164 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~--l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sK  164 (226)
                      ++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.  |++  .++||++||..+..+.++...|++||
T Consensus        99 ~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  177 (277)
T 2rhc_B           99 PVDVLVNNAGRPG-GGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASK  177 (277)
T ss_dssp             SCSEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCCCCCccHHHHH
Confidence            9999999999875 567888999999999999999999999999998  854  47999999999998889999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCceeCCccccccc----------C---chhhhhhccCCCCCchhhhccc
Q 027248          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS----------N---DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       165 aa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~----------~---~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +++++|+++++.|+.+ ||+||+|+||+++|++......          .   ..+....+..++..|+|+|+++
T Consensus       178 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v  252 (277)
T 2rhc_B          178 HGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMV  252 (277)
T ss_dssp             HHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            9999999999999998 9999999999999998654321          1   1122334556789999999875

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=100.00  E-value=2.5e-42  Score=283.51  Aligned_cols=216  Identities=26%  Similarity=0.330  Sum_probs=183.9

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCc-chHHHHHHHHH-hcCCcEEEEEeeCCC----HHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ-KNVDEAVVKLK-ARGIEVIGVVCHVSN----GQQRKNLI   80 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~-~~~~~~~~~~~-~~~~~~~~~~~Dv~~----~~~v~~~~   80 (226)
                      ..+++||+++||||++|||++++++|+++|++|++++|+. ++++...+++. +.+.++.++.+|+++    +++++.++
T Consensus        18 ~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~   97 (288)
T 2x9g_A           18 GSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEII   97 (288)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHH
Confidence            3457899999999999999999999999999999999998 88888877776 556678899999999    99999999


Q ss_pred             HHHHHHhCCCCEEEEcCCCCCCCCcc-----cc-----ccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--------CCEE
Q 027248           81 NQTIEKFGKIDVVVSNAAANPSVDSI-----LQ-----TKESVLDKLWDINVKSSILLLQDAAPHLQK--------GSSV  142 (226)
Q Consensus        81 ~~~~~~~~~id~li~nag~~~~~~~~-----~~-----~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--------~~~i  142 (226)
                      +++.+.++++|+||||||+.. ..++     .+     .+.++|++++++|+.++++++++++|.|++        .++|
T Consensus        98 ~~~~~~~g~iD~lvnnAG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~i  176 (288)
T 2x9g_A           98 NSCFRAFGRCDVLVNNASAFY-PTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSI  176 (288)
T ss_dssp             HHHHHHHSCCCEEEECCCCCC-CCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEE
T ss_pred             HHHHHhcCCCCEEEECCCCCC-CCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEE
Confidence            999999999999999999875 3455     56     888999999999999999999999999965        4699


Q ss_pred             EEEeccCCcCCCCCCchhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC--chhhhhhccCCC-CCc
Q 027248          143 VLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN--DGVVSSVSSLKL-SPP  218 (226)
Q Consensus       143 v~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~-~~p  218 (226)
                      |++||..+..+.++...|++||+|+++|+++|+.|+++ ||+||+|+||+++|++ + ....  ..+....+..++ .+|
T Consensus       177 v~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~-~~~~~~~~~~~~~p~~r~~~~p  254 (288)
T 2x9g_A          177 VNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A-MGEEEKDKWRRKVPLGRREASA  254 (288)
T ss_dssp             EEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T-SCHHHHHHHHHTCTTTSSCCCH
T ss_pred             EEEecccccCCCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-c-cChHHHHHHHhhCCCCCCCCCH
Confidence            99999999999999999999999999999999999988 9999999999999998 4 2111  112223455667 899


Q ss_pred             hhhhccc
Q 027248          219 SSLTLAV  225 (226)
Q Consensus       219 ~~~a~av  225 (226)
                      +|+|+++
T Consensus       255 edvA~~v  261 (288)
T 2x9g_A          255 EQIADAV  261 (288)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999875

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=100.00  E-value=1.7e-42  Score=282.20  Aligned_cols=216  Identities=24%  Similarity=0.349  Sum_probs=182.7

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEE-ecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      .++|+++||||++|||++++++|+++|++|+++ .|+.+.++...+++.+.+.++.++.+|++++++++++++++.++++
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  103 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFG  103 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            468999999999999999999999999999776 7788888888888888888899999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc-----CCEEEEEeccCCcCCCC-CCchhhH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-----GSSVVLISSIAGYQPQS-SMAMYGV  162 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~-----~~~iv~~sS~~~~~~~~-~~~~Y~~  162 (226)
                      ++|+||||||+.....++.+.+.++|++++++|+.|+++++++++|.|++     .++||++||..+..+.+ +...|++
T Consensus       104 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~a  183 (272)
T 4e3z_A          104 RLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYAA  183 (272)
T ss_dssp             CCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTTTCHHHHH
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCCCcchhHH
Confidence            99999999998764578889999999999999999999999999999854     57899999999887665 6788999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCc---hhhhhhccCCCCCchhhhccc
Q 027248          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND---GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       163 sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ||+|+++|+++|+.|+.+ ||+|++|+||+++|++........   ......+..++..|+|+|+++
T Consensus       184 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i  250 (272)
T 4e3z_A          184 SKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLPDRAREMAPSVPMQRAGMPEEVADAI  250 (272)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC------------------CCTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCChHHHHHHhhcCCcCCCcCHHHHHHHH
Confidence            999999999999999988 999999999999999876532222   233444556778899999875

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=4.5e-43  Score=284.55  Aligned_cols=212  Identities=28%  Similarity=0.425  Sum_probs=181.8

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      +++||+++||||++|||++++++|+++|++|++++|+++++++..+++   ..++.++.+|++++++++++++++.+.++
T Consensus         3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   79 (263)
T 2a4k_A            3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL---EAEAIAVVADVSDPKAVEAVFAEALEEFG   79 (263)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC---CSSEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---cCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            467899999999999999999999999999999999988776665544   25688899999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHhHHHHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALL  168 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~  168 (226)
                      ++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++.++||++||..+. +.++...|++||++++
T Consensus        80 ~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~-~~~~~~~Y~asK~a~~  157 (263)
T 2a4k_A           80 RLHGVAHFAGVAH-SALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-GAFGLAHYAAGKLGVV  157 (263)
T ss_dssp             CCCEEEEGGGGTT-TTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-CHHHHHHHHHCSSHHH
T ss_pred             CCcEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhc-CCCCcHHHHHHHHHHH
Confidence            9999999999875 5677889999999999999999999999999999446899999999998 7788899999999999


Q ss_pred             HHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC--chhhhhhccCCCCCchhhhccc
Q 027248          169 GLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN--DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       169 ~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +|+++++.|+++ ||+||+|+||+++|++.+.....  ..+....+..++.+|+|+|+++
T Consensus       158 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v  217 (263)
T 2a4k_A          158 GLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGASPLGRAGRPEEVAQAA  217 (263)
T ss_dssp             HHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHHHHHHHHHTSTTCSCBCHHHHHHHH
T ss_pred             HHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            999999999988 99999999999999987654211  1122334556788999999865

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.7e-42  Score=280.63  Aligned_cols=207  Identities=27%  Similarity=0.344  Sum_probs=181.5

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      +++++|+++||||++|||++++++|+++|++|++++|+.++..         ..++.++.+|++++++++++++++.+++
T Consensus        24 ~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---------~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   94 (260)
T 3un1_A           24 MRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA---------DPDIHTVAGDISKPETADRIVREGIERF   94 (260)
T ss_dssp             HHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS---------STTEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             hCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc---------cCceEEEEccCCCHHHHHHHHHHHHHHC
Confidence            4678999999999999999999999999999999999876532         2268889999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCC--CCCCchhhHh
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQP--QSSMAMYGVT  163 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~--~~~~~~Y~~s  163 (226)
                      |++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|++  .++||++||..+..+  .++...|++|
T Consensus        95 g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~s  173 (260)
T 3un1_A           95 GRIDSLVNNAGVFL-AKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSALASLT  173 (260)
T ss_dssp             SCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTTCCCHHHHHH
T ss_pred             CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCCCccHHHHHH
Confidence            99999999999876 578889999999999999999999999999999854  479999999887643  4456889999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       164 Kaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      |+|+++|+++|+.|+++ ||+||+|+||+++|++..... ...+....+..++..|+|+|+++
T Consensus       174 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~-~~~~~~~~p~~r~~~~~dva~av  235 (260)
T 3un1_A          174 KGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAET-HSTLAGLHPVGRMGEIRDVVDAV  235 (260)
T ss_dssp             HHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGGG-HHHHHTTSTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHHH-HHHHhccCCCCCCcCHHHHHHHH
Confidence            99999999999999998 999999999999999875421 12234455677899999999875

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=100.00  E-value=1.8e-42  Score=281.36  Aligned_cols=222  Identities=23%  Similarity=0.333  Sum_probs=191.2

Q ss_pred             ccccccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEE-EecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHH
Q 027248            3 KMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVV-SSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLIN   81 (226)
Q Consensus         3 ~~~~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   81 (226)
                      ++.+..++.+|+++||||++|||++++++|+++|++|++ ..|+.+..+...+++.+.+.++.++.+|++++++++++++
T Consensus        17 n~~~~~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~   96 (267)
T 4iiu_A           17 NLYFQSNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLE   96 (267)
T ss_dssp             --------CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             hhhhccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHH
Confidence            345556788999999999999999999999999999865 5677778888888888888899999999999999999999


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhh---cCCEEEEEeccCCcCCCCCCc
Q 027248           82 QTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ---KGSSVVLISSIAGYQPQSSMA  158 (226)
Q Consensus        82 ~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~---~~~~iv~~sS~~~~~~~~~~~  158 (226)
                      ++.+.++++|+||||||+.. ..++.+.+.++|++++++|+.+++++++++++.|.   +.++||++||..+..+.++..
T Consensus        97 ~~~~~~g~id~li~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  175 (267)
T 4iiu_A           97 HEIAQHGAWYGVVSNAGIAR-DAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQV  175 (267)
T ss_dssp             HHHHHHCCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCTTCH
T ss_pred             HHHHHhCCccEEEECCCCCC-CCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCCCCc
Confidence            99999999999999999876 57788899999999999999999999999998873   357999999999999999999


Q ss_pred             hhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC-chhhhhhccCCCCCchhhhccc
Q 027248          159 MYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN-DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       159 ~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      .|++||+|+++|+++|+.|+.+ ||+|++|+||+++|++.+..... .......+..++.+|+|+|+++
T Consensus       176 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~p~~~~~~~edva~~~  244 (267)
T 4iiu_A          176 NYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEMEESALKEAMSMIPMKRMGQAEEVAGLA  244 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCCHHHHHHHHHTCTTCSCBCHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCcccccHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            9999999999999999999988 99999999999999987654211 2234455667789999999875

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=100.00  E-value=1.4e-42  Score=280.73  Aligned_cols=216  Identities=21%  Similarity=0.295  Sum_probs=187.9

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHh---CCCeEEEEecCcchHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHH
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGL---EGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQT   83 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~---~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~   83 (226)
                      +++||+++||||++|||++++++|++   +|++|++++|++++++...+++.+.  +.++.++.+|++++++++++++++
T Consensus         3 ~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   82 (259)
T 1oaa_A            3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHH
Confidence            46799999999999999999999999   8999999999999888888887664  557889999999999999999999


Q ss_pred             HH--HhCCCC--EEEEcCCCCCC-CCcccc-ccHHHHHHHHHHHHHHHHHHHHHHhhhhhcC----CEEEEEeccCCcCC
Q 027248           84 IE--KFGKID--VVVSNAAANPS-VDSILQ-TKESVLDKLWDINVKSSILLLQDAAPHLQKG----SSVVLISSIAGYQP  153 (226)
Q Consensus        84 ~~--~~~~id--~li~nag~~~~-~~~~~~-~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~----~~iv~~sS~~~~~~  153 (226)
                      .+  .+|++|  +||||||+... ..++.+ .+.++|++++++|+.|+++++++++|.|++.    ++||++||..+..+
T Consensus        83 ~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~  162 (259)
T 1oaa_A           83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP  162 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC
T ss_pred             HhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCC
Confidence            88  678899  99999998642 245777 7899999999999999999999999999653    68999999999999


Q ss_pred             CCCCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCccccccc---Cch----hhhhhccCCCCCchhhhccc
Q 027248          154 QSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITS---NDG----VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       154 ~~~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~~~~~~---~~~----~~~~~~~~~~~~p~~~a~av  225 (226)
                      .++...|++||+|+++|+++|+.|+.+ |+||+|+||+++|+|.+....   ...    +....+..++.+|+|+|+++
T Consensus       163 ~~~~~~Y~asKaa~~~~~~~la~e~~~-i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v  240 (259)
T 1oaa_A          163 YKGWGLYCAGKAARDMLYQVLAAEEPS-VRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKL  240 (259)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHCTT-EEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHHHHHHHH
T ss_pred             CCCccHHHHHHHHHHHHHHHHHhhCCC-ceEEEecCCCcCcchHHHHhhccCChhHHHHHHHhhhcCCcCCHHHHHHHH
Confidence            999999999999999999999999975 999999999999998765421   111    22334567889999999875

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=100.00  E-value=7.5e-42  Score=280.28  Aligned_cols=216  Identities=24%  Similarity=0.293  Sum_probs=184.5

Q ss_pred             ccCCCEEEEEcCC--CchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            9 RFQGKVAIVTAST--QGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         9 ~~~gk~vlItGa~--~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      +++||+++||||+  +|||++++++|+++|++|++++|+++ .+...+++.+..+.+.++.+|++++++++++++++.+.
T Consensus        18 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   96 (285)
T 2p91_A           18 LLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEEN   96 (285)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4789999999999  99999999999999999999999985 44555555543334678899999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCC---CCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhh-cCCEEEEEeccCCcCCCCCCchhhH
Q 027248           87 FGKIDVVVSNAAANPS---VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ-KGSSVVLISSIAGYQPQSSMAMYGV  162 (226)
Q Consensus        87 ~~~id~li~nag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~-~~~~iv~~sS~~~~~~~~~~~~Y~~  162 (226)
                      ++++|+||||||+...   ..++.+.+.++|++++++|+.|+++++++++|.|+ ++++||++||..+..+.++...|++
T Consensus        97 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  176 (285)
T 2p91_A           97 WGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVVPHYNVMGI  176 (285)
T ss_dssp             TSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBCTTTTHHHH
T ss_pred             cCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCCCCccHHHH
Confidence            9999999999998642   25677889999999999999999999999999996 4689999999999988899999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch----hhhhhccCCCCCchhhhccc
Q 027248          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG----VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       163 sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~----~~~~~~~~~~~~p~~~a~av  225 (226)
                      ||+|+++|+++|+.|+++ ||+||+|+||+++|++.+.......    +....+..++.+|+|+|+++
T Consensus       177 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~  244 (285)
T 2p91_A          177 AKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPFGKPITIEDVGDTA  244 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTHHHHHHHHHHHSTTSSCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccchHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            999999999999999988 9999999999999998755322111    22234556788999999865

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.4e-42  Score=282.73  Aligned_cols=216  Identities=30%  Similarity=0.466  Sum_probs=186.7

Q ss_pred             cccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus         6 ~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      +..+++||+++||||++|||++++++|+++|++|++++|++++++...+++.    .+.++.+|++++++++++++++.+
T Consensus         3 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~Dv~d~~~v~~~~~~~~~   78 (270)
T 1yde_A            3 TGTRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP----GAVFILCDVTQEDDVKTLVSETIR   78 (270)
T ss_dssp             -CCTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT----TEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----CCeEEEcCCCCHHHHHHHHHHHHH
Confidence            3446789999999999999999999999999999999999887766655442    477899999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc-CCEEEEEeccCCcCCCCCCchhhHhH
Q 027248           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-GSSVVLISSIAGYQPQSSMAMYGVTK  164 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK  164 (226)
                      +++++|+||||||+.....++.+.+.++|++++++|+.++++++++++|+|++ .++||++||..+..+.++...|++||
T Consensus        79 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  158 (270)
T 1yde_A           79 RFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQAVPYVATK  158 (270)
T ss_dssp             HHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred             HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCCCCCcccHHHH
Confidence            99999999999998754467888999999999999999999999999999854 68999999998888888999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCceeCCccccccc---Cc--hh---hhhhccCCCCCchhhhccc
Q 027248          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS---ND--GV---VSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       165 aa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~---~~--~~---~~~~~~~~~~~p~~~a~av  225 (226)
                      +++++|+++++.|+++ ||+||+|+||+++|++.+....   ..  .+   ....+..++.+|+|+|+++
T Consensus       159 aa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v  228 (270)
T 1yde_A          159 GAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAA  228 (270)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCCCCCCcCHHHHHHHH
Confidence            9999999999999988 9999999999999998755321   11  01   1234556788999999865

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=4e-42  Score=277.76  Aligned_cols=210  Identities=27%  Similarity=0.400  Sum_probs=182.9

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      +++||+++||||++|||++++++|+++|++|++++|++++ +...+++.    + .++.+|++++++++++++++.+.++
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~----~-~~~~~D~~~~~~~~~~~~~~~~~~g   76 (256)
T 2d1y_A            3 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG----G-AFFQVDLEDERERVRFVEEAAYALG   76 (256)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT----C-EEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh----C-CEEEeeCCCHHHHHHHHHHHHHHcC
Confidence            4679999999999999999999999999999999999887 66555553    3 6789999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa  166 (226)
                      ++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|++  .++||++||..+..+.++...|++||++
T Consensus        77 ~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  155 (256)
T 2d1y_A           77 RVDVLVNNAAIAA-PGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGG  155 (256)
T ss_dssp             CCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHHH
T ss_pred             CCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCChhHHHHHHH
Confidence            9999999999875 567788999999999999999999999999999965  4799999999999888999999999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCceeCCccccc----c-cCc---hhhhhhccCCCCCchhhhccc
Q 027248          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYI----T-SND---GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       167 ~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~----~-~~~---~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +++|+++++.|+++ ||+||+|+||+++|++....    . ...   .+....+..++..|+|+|+++
T Consensus       156 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~  223 (256)
T 2d1y_A          156 LVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAV  223 (256)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            99999999999988 99999999999999986543    1 111   122334556788999999875

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=100.00  E-value=3.7e-42  Score=279.32  Aligned_cols=220  Identities=22%  Similarity=0.375  Sum_probs=191.4

Q ss_pred             ccccccCCCEEEEEcCC--CchhHHHHHHHHhCCCeEEEEecCcchH-HHHHHHHHhc-CCcEEEEEeeCCCHHHHHHHH
Q 027248            5 KMAKRFQGKVAIVTAST--QGIGFGIAERLGLEGASVVVSSRKQKNV-DEAVVKLKAR-GIEVIGVVCHVSNGQQRKNLI   80 (226)
Q Consensus         5 ~~~~~~~gk~vlItGa~--~giG~a~~~~l~~~g~~v~~~~r~~~~~-~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~   80 (226)
                      +...+++||+++||||+  +|||++++++|+++|++|++++|+.+.. ++..+++.+. +.++.++.+|+++++++++++
T Consensus        13 ~~~~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~   92 (267)
T 3gdg_A           13 LDQLSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLV   92 (267)
T ss_dssp             HHHHCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHH
T ss_pred             ccccCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHH
Confidence            33467899999999999  9999999999999999999999987765 5666666543 678999999999999999999


Q ss_pred             HHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCC--CC
Q 027248           81 NQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQ--SS  156 (226)
Q Consensus        81 ~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~--~~  156 (226)
                      +++.++++++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++  .++||++||..+..+.  ++
T Consensus        93 ~~~~~~~g~id~li~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  171 (267)
T 3gdg_A           93 KDVVADFGQIDAFIANAGATA-DSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQE  171 (267)
T ss_dssp             HHHHHHTSCCSEEEECCCCCC-CSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCSSSC
T ss_pred             HHHHHHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCCCCC
Confidence            999999999999999999876 567888999999999999999999999999999954  5899999999887765  57


Q ss_pred             CchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCcccccccC--chhhhhhccCCCCCchhhhccc
Q 027248          157 MAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSN--DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       157 ~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ...|++||+|+++|+++|+.|+++.|+||+|+||+++|++.+.....  ..+....+..++..|+|+|+++
T Consensus       172 ~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~r~~~~~dva~~~  242 (267)
T 3gdg_A          172 QTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDFVPKETQQLWHSMIPMGRDGLAKELKGAY  242 (267)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGGSCHHHHHHHHTTSTTSSCEETHHHHHHH
T ss_pred             CCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhhCCHHHHHHHHhcCCCCCCcCHHHHHhHh
Confidence            88999999999999999999998789999999999999998755322  2234455667788999999875

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=100.00  E-value=1.6e-42  Score=282.00  Aligned_cols=214  Identities=20%  Similarity=0.230  Sum_probs=182.1

Q ss_pred             cccCCCEEEEEcC--CCchhHHHHHHHHhCCCeEEEEecCcchH-HHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHH
Q 027248            8 KRFQGKVAIVTAS--TQGIGFGIAERLGLEGASVVVSSRKQKNV-DEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTI   84 (226)
Q Consensus         8 ~~~~gk~vlItGa--~~giG~a~~~~l~~~g~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (226)
                      .+++||+++||||  ++|||++++++|+++|++|++++|+.++. +...+++   +.++.++.+|++++++++++++++.
T Consensus         3 ~~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~   79 (269)
T 2h7i_A            3 GLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRL---PAKAPLLELDVQNEEHLASLAGRVT   79 (269)
T ss_dssp             CTTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTS---SSCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhc---CCCceEEEccCCCHHHHHHHHHHHH
Confidence            3578999999999  99999999999999999999999988652 3333222   4467788999999999999999999


Q ss_pred             HHhC---CCCEEEEcCCCCCC----CCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCC
Q 027248           85 EKFG---KIDVVVSNAAANPS----VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSM  157 (226)
Q Consensus        85 ~~~~---~id~li~nag~~~~----~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~  157 (226)
                      +.+|   ++|+||||||+...    ..++.+.+.++|++++++|+.++++++++++|+|+++++||++||..+ .+.+++
T Consensus        80 ~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~-~~~~~~  158 (269)
T 2h7i_A           80 EAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPS-RAMPAY  158 (269)
T ss_dssp             HHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCS-SCCTTT
T ss_pred             HHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccc-cccCch
Confidence            9999   99999999998642    357788999999999999999999999999999987789999999876 577889


Q ss_pred             chhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCccccccc---Cc-----------hhhhhhccC-CCCCchhh
Q 027248          158 AMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS---ND-----------GVVSSVSSL-KLSPPSSL  221 (226)
Q Consensus       158 ~~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~---~~-----------~~~~~~~~~-~~~~p~~~  221 (226)
                      ..|++||+++++|+++|+.|+++ ||+||+|+||+++|++.+....   .+           .+....+.. ++.+|+|+
T Consensus       159 ~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~rr~~~p~dv  238 (269)
T 2h7i_A          159 NWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPV  238 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCCHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhccCCcccCCCCHHHH
Confidence            99999999999999999999988 9999999999999998654321   11           122334555 68999999


Q ss_pred             hccc
Q 027248          222 TLAV  225 (226)
Q Consensus       222 a~av  225 (226)
                      |+++
T Consensus       239 A~~v  242 (269)
T 2h7i_A          239 AKTV  242 (269)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9875

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=100.00  E-value=3.8e-43  Score=283.86  Aligned_cols=212  Identities=23%  Similarity=0.329  Sum_probs=172.3

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      .++++||+++||||++|||++++++|+++|++|++++|+.+..   .++   .+.++.++.+|++++++++.+++.+.+ 
T Consensus         4 ~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~---~~~---~~~~~~~~~~D~~~~~~v~~~~~~~~~-   76 (257)
T 3tl3_A            4 SMEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDV---VAD---LGDRARFAAADVTDEAAVASALDLAET-   76 (257)
T ss_dssp             ------CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHH---HHH---TCTTEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             cceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHH---HHh---cCCceEEEECCCCCHHHHHHHHHHHHH-
Confidence            3467899999999999999999999999999999999965432   222   256788999999999999999998877 


Q ss_pred             hCCCCEEEEcCCCCCCCC---ccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc----------CCEEEEEeccCCcCC
Q 027248           87 FGKIDVVVSNAAANPSVD---SILQTKESVLDKLWDINVKSSILLLQDAAPHLQK----------GSSVVLISSIAGYQP  153 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~---~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~----------~~~iv~~sS~~~~~~  153 (226)
                      ++++|+||||||+.....   +..+.+.++|++++++|+.|+++++++++|+|++          .++||++||..+..+
T Consensus        77 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  156 (257)
T 3tl3_A           77 MGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDG  156 (257)
T ss_dssp             HSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CC
T ss_pred             hCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCC
Confidence            999999999999864211   1234889999999999999999999999999965          469999999999988


Q ss_pred             CCCCchhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC--chhhhhhcc-CCCCCchhhhccc
Q 027248          154 QSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN--DGVVSSVSS-LKLSPPSSLTLAV  225 (226)
Q Consensus       154 ~~~~~~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~-~~~~~p~~~a~av  225 (226)
                      .++...|++||+|+++|+++|+.|+++ ||+||+|+||+++|++.+.....  ..+....+. .++.+|+|+|+++
T Consensus       157 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~r~~~p~dva~~v  232 (257)
T 3tl3_A          157 QIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLPEEARASLGKQVPHPSRLGNPDEYGALA  232 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---CHHHHHHHHHTSSSSCSCBCHHHHHHHH
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhccHHHHHHHHhcCCCCCCccCHHHHHHHH
Confidence            889999999999999999999999998 99999999999999998765322  112334444 7889999999875

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=100.00  E-value=2.7e-42  Score=278.33  Aligned_cols=213  Identities=24%  Similarity=0.312  Sum_probs=186.6

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      +++||+++||||++|||++++++|+++|++|++++|+++++++..+++   +.++.++.+|++++++++++++++.+.++
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   79 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GERSMFVRHDVSSEADWTLVMAAVQRRLG   79 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            467999999999999999999999999999999999988877776666   55788899999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc-CCEEEEEeccCCcCCCCCCchhhHhHHHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-GSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~-~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~  167 (226)
                      ++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|++ +++||++||..+..+.++...|++||+++
T Consensus        80 ~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~  158 (253)
T 1hxh_A           80 TLNVLVNNAGILL-PGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIEQYAGYSASKAAV  158 (253)
T ss_dssp             SCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred             CCCEEEECCCCCC-CCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcCCEEEEEcchhhcCCCCCCccHHHHHHHH
Confidence            9999999999875 567888999999999999999999999999999964 48999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCC---CeEEEEEecCceeCCcccccccCch----hhh---hhccCCCCCchhhhccc
Q 027248          168 LGLTKALAAEMAP---DTRVNCVAPGFVPTHFAEYITSNDG----VVS---SVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       168 ~~~~~~la~e~~~---~i~v~~v~Pg~v~t~~~~~~~~~~~----~~~---~~~~~~~~~p~~~a~av  225 (226)
                      ++|+++++.|+++   ||+||+|+||+++|++.........    +..   ..+..++.+|+|+|+++
T Consensus       159 ~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~  226 (253)
T 1hxh_A          159 SALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLV  226 (253)
T ss_dssp             HHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHHHHHHHH
T ss_pred             HHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccchhhhHHHHhhhhccCccCCCCCHHHHHHHH
Confidence            9999999999864   7999999999999998765322211    112   33445678999999865

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=100.00  E-value=4.5e-42  Score=276.40  Aligned_cols=210  Identities=21%  Similarity=0.313  Sum_probs=173.9

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCE
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~   92 (226)
                      |+++||||++|||++++++|+++|++|++++|++++++...+++.   .++.++.+|++++++++++++++.+.++++|+
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   77 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG---DNLYIAQLDVRNRAAIEEMLASLPAEWCNIDI   77 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---TTEEEEECCTTCHHHHHHHHHTSCTTTCCCCE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc---CceEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            689999999999999999999999999999999888777766653   46888999999999999999999999999999


Q ss_pred             EEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHHHHHH
Q 027248           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLGL  170 (226)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~  170 (226)
                      ||||||+.....++.+.+.++|++++++|+.|+++++++++|+|++  .++||++||..+..+.++...|++||+++++|
T Consensus        78 lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~  157 (248)
T 3asu_A           78 LVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQF  157 (248)
T ss_dssp             EEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred             EEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCCCCCchHHHHHHHHHHH
Confidence            9999998643467888999999999999999999999999999953  58999999999999999999999999999999


Q ss_pred             HHHHHHHhCC-CeEEEEEecCcee-CCccccccc-Cc-hhhhhhccCCCCCchhhhccc
Q 027248          171 TKALAAEMAP-DTRVNCVAPGFVP-THFAEYITS-ND-GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       171 ~~~la~e~~~-~i~v~~v~Pg~v~-t~~~~~~~~-~~-~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +++|+.|+++ ||+||+|+||+++ |++...... .. ............+|+|+|+++
T Consensus       158 ~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v  216 (248)
T 3asu_A          158 SLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAV  216 (248)
T ss_dssp             HHHHHHHTTTSCCEEEEEEECSBCC----------------------CCBCHHHHHHHH
T ss_pred             HHHHHHHhhhcCcEEEEEeccccccCcchhhcccCchHHHHHHHhccCCCCHHHHHHHH
Confidence            9999999988 9999999999999 998653211 11 111112223456899999875

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=100.00  E-value=1e-41  Score=278.91  Aligned_cols=216  Identities=21%  Similarity=0.232  Sum_probs=189.2

Q ss_pred             cccCCCEEEEEcCC--CchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248            8 KRFQGKVAIVTAST--QGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus         8 ~~~~gk~vlItGa~--~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      .+++||+++||||+  +|||++++++|+++|++|++++|+.  .++..+++.+...++.++.+|++++++++++++++.+
T Consensus        22 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   99 (280)
T 3nrc_A           22 GFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGK   99 (280)
T ss_dssp             CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHH
Confidence            35789999999988  7899999999999999999999988  4455666666666788999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCC---CCcccc-ccHHHHHHHHHHHHHHHHHHHHHHhhhhh-cCCEEEEEeccCCcCCCCCCchh
Q 027248           86 KFGKIDVVVSNAAANPS---VDSILQ-TKESVLDKLWDINVKSSILLLQDAAPHLQ-KGSSVVLISSIAGYQPQSSMAMY  160 (226)
Q Consensus        86 ~~~~id~li~nag~~~~---~~~~~~-~~~~~~~~~~~~N~~~~~~~~~~~~~~l~-~~~~iv~~sS~~~~~~~~~~~~Y  160 (226)
                      .++++|+||||||+...   ..++.+ .+.++|++++++|+.++++++++++|+|+ +.++||++||..+..+.++...|
T Consensus       100 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  179 (280)
T 3nrc_A          100 VWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAMPSYNTM  179 (280)
T ss_dssp             HCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSCCTTTHHH
T ss_pred             HcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccCCCCchhh
Confidence            99999999999998752   144555 88999999999999999999999999986 46899999999999999999999


Q ss_pred             hHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch----hhhhhccCCCCCchhhhccc
Q 027248          161 GVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG----VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       161 ~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~----~~~~~~~~~~~~p~~~a~av  225 (226)
                      ++||+|+++|+++|+.|+++ ||+||+|+||+++|++.+.......    +....+..++.+|+|+|+++
T Consensus       180 ~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~pedvA~~v  249 (280)
T 3nrc_A          180 GVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPLKKNVDIMEVGNTV  249 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTHHHHHHHHHHHSTTCSCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcchHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence            99999999999999999998 9999999999999999877654322    23445667889999999875

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=4.2e-42  Score=280.08  Aligned_cols=215  Identities=20%  Similarity=0.298  Sum_probs=177.9

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      +++ |+++||||++|||++++++|+++|++|++++|++++++...+++... .++.++.+|++++++++.+++++.+.++
T Consensus        19 ~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   96 (272)
T 2nwq_A           19 HMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK-TRVLPLTLDVRDRAAMSAAVDNLPEEFA   96 (272)
T ss_dssp             --C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT-SCEEEEECCTTCHHHHHHHHHTCCGGGS
T ss_pred             CcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            455 99999999999999999999999999999999998888877777543 5688999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CC-EEEEEeccCCcCCCCCCchhhHhHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GS-SVVLISSIAGYQPQSSMAMYGVTKT  165 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~-~iv~~sS~~~~~~~~~~~~Y~~sKa  165 (226)
                      ++|+||||||+.....++.+.+.++|++++++|+.|+++++++++|.|++  .+ +||++||..+..+.++...|++||+
T Consensus        97 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~~~~~Y~asKa  176 (272)
T 2nwq_A           97 TLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKA  176 (272)
T ss_dssp             SCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCCCCchHHHHHH
Confidence            99999999998653367888999999999999999999999999999954  46 9999999999989899999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCceeCCccccccc-Cc-hhhhhhccCCCCCchhhhccc
Q 027248          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS-ND-GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       166 a~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~-~~-~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ++++|+++|+.|+++ ||+||+|+||+++|++...... .. ............+|+|+|+++
T Consensus       177 a~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v  239 (272)
T 2nwq_A          177 FVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQARYDKTYAGAHPIQPEDIAETI  239 (272)
T ss_dssp             HHHHHHHHHHTTCTTSCCEEEEEEECSBC--------------------CCCCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccccchHHHHHhhccCCCCCHHHHHHHH
Confidence            999999999999988 9999999999999998654221 11 111112223457999999865

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=100.00  E-value=6e-42  Score=279.41  Aligned_cols=214  Identities=27%  Similarity=0.349  Sum_probs=180.8

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEec-CcchHHHHHHHHHhc-CCcEEEEEeeCCCH----HHHHHHHHH
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSR-KQKNVDEAVVKLKAR-GIEVIGVVCHVSNG----QQRKNLINQ   82 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~----~~v~~~~~~   82 (226)
                      +++||+++||||++|||++++++|+++|++|++++| ++++++...+++.+. +.++.++.+|++++    ++++.++++
T Consensus         8 ~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   87 (276)
T 1mxh_A            8 ASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDC   87 (276)
T ss_dssp             ---CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHH
Confidence            467999999999999999999999999999999999 888888888877665 66788999999999    999999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCccccccH-----------HHHHHHHHHHHHHHHHHHHHHhhhhh-cC------CEEEE
Q 027248           83 TIEKFGKIDVVVSNAAANPSVDSILQTKE-----------SVLDKLWDINVKSSILLLQDAAPHLQ-KG------SSVVL  144 (226)
Q Consensus        83 ~~~~~~~id~li~nag~~~~~~~~~~~~~-----------~~~~~~~~~N~~~~~~~~~~~~~~l~-~~------~~iv~  144 (226)
                      +.+.++++|+||||||+.. ..++.+.+.           ++|++++++|+.++++++++++|.|+ +.      ++||+
T Consensus        88 ~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~  166 (276)
T 1mxh_A           88 SFRAFGRCDVLVNNASAYY-PTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVN  166 (276)
T ss_dssp             HHHHHSCCCEEEECCCCCC-CCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEE
T ss_pred             HHHhcCCCCEEEECCCCCC-CCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEE
Confidence            9999999999999999875 456777777           99999999999999999999999985 33      79999


Q ss_pred             EeccCCcCCCCCCchhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC--chhhhhhccCC-CCCchh
Q 027248          145 ISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN--DGVVSSVSSLK-LSPPSS  220 (226)
Q Consensus       145 ~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~-~~~p~~  220 (226)
                      +||..+..+.++...|++||+++++|+++|+.|+++ ||+||+|+||+++|+  ......  ..+....+..+ +.+|+|
T Consensus       167 isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~--~~~~~~~~~~~~~~~p~~r~~~~~~d  244 (276)
T 1mxh_A          167 LCDAMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP--PAMPQETQEEYRRKVPLGQSEASAAQ  244 (276)
T ss_dssp             ECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC--SSSCHHHHHHHHTTCTTTSCCBCHHH
T ss_pred             ECchhhcCCCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC--ccCCHHHHHHHHhcCCCCCCCCCHHH
Confidence            999999999999999999999999999999999988 999999999999999  222110  11222344456 889999


Q ss_pred             hhccc
Q 027248          221 LTLAV  225 (226)
Q Consensus       221 ~a~av  225 (226)
                      +|+++
T Consensus       245 va~~v  249 (276)
T 1mxh_A          245 IADAI  249 (276)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99875

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=100.00  E-value=4.4e-42  Score=278.43  Aligned_cols=219  Identities=19%  Similarity=0.214  Sum_probs=179.5

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHH-HHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVD-EAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      ..++.+|+++||||++|||++++++|+++|++|++++|+.+... ...+.+.+.+.++.++.+|++++++++++++++.+
T Consensus         2 ~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   81 (264)
T 3i4f_A            2 SLGRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMS   81 (264)
T ss_dssp             ----CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CcccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            34566899999999999999999999999999999988765544 44444444466799999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCC-CCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEecc-CC-cCCCCCCchh
Q 027248           86 KFGKIDVVVSNAAAN-PSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSI-AG-YQPQSSMAMY  160 (226)
Q Consensus        86 ~~~~id~li~nag~~-~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~-~~-~~~~~~~~~Y  160 (226)
                      +++++|+||||||+. ....++.+.+.++|++++++|+.|+++++++++|+|++  .++||++||. .+ ..+.++.+.|
T Consensus        82 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~Y  161 (264)
T 3i4f_A           82 HFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAF  161 (264)
T ss_dssp             HHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCCCTTCHHH
T ss_pred             HhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCCCCCCchh
Confidence            999999999999942 22567888999999999999999999999999999954  4799999998 33 4566788999


Q ss_pred             hHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCc--hhhhhhccCCCCCchhhhccc
Q 027248          161 GVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND--GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       161 ~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~--~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ++||+|+++|+++|+.|+++ ||+||+|+||+++|++.+......  ......+..++.+|+|+|+++
T Consensus       162 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v  229 (264)
T 3i4f_A          162 AAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQEARQLKEHNTPIGRSGTGEDIARTI  229 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCHHHHHHC--------CCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhccHHHHHHHhhcCCCCCCcCHHHHHHHH
Confidence            99999999999999999988 999999999999999987654321  123345667788999999875

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=100.00  E-value=1.9e-41  Score=274.10  Aligned_cols=218  Identities=28%  Similarity=0.367  Sum_probs=191.7

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEec-CcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSR-KQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      ..+++||+++||||++|||++++++|+++|++|++++| ++++++...+++...+.++.++.+|++++++++++++++.+
T Consensus         2 ~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (261)
T 1gee_A            2 YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIK   81 (261)
T ss_dssp             CGGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999 77777777777777677888999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc---CCEEEEEeccCCcCCCCCCchhhH
Q 027248           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGV  162 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~---~~~iv~~sS~~~~~~~~~~~~Y~~  162 (226)
                      .++++|+||||||... ..++.+.+.++|++++++|+.++++++++++|.|++   .++||++||..+..+.++...|++
T Consensus        82 ~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  160 (261)
T 1gee_A           82 EFGKLDVMINNAGLEN-PVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAA  160 (261)
T ss_dssp             HHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHH
T ss_pred             HcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCCCccHHHH
Confidence            9999999999999875 567788899999999999999999999999999865   479999999999988899999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchh----hhhhccCCCCCchhhhccc
Q 027248          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGV----VSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       163 sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~----~~~~~~~~~~~p~~~a~av  225 (226)
                      ||++++.+++.++.|+.+ +|++++++||+++|++..........    ....+..++.+|+|+|+++
T Consensus       161 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  228 (261)
T 1gee_A          161 SKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVA  228 (261)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccChhHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            999999999999999988 99999999999999987654322221    2233445688999999875

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=100.00  E-value=8.6e-42  Score=285.23  Aligned_cols=215  Identities=27%  Similarity=0.336  Sum_probs=185.6

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEe-cCcchHHHHHHHHH-hcCCcEEEEEeeCCCHH------------
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSS-RKQKNVDEAVVKLK-ARGIEVIGVVCHVSNGQ------------   74 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~-r~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~------------   74 (226)
                      +++||++|||||++|||++++++|+++|++|++++ |++++++...+++. ..+.++.++.+|+++++            
T Consensus        43 ~l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~  122 (328)
T 2qhx_A           43 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAP  122 (328)
T ss_dssp             --CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CC
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhccccccccccc
Confidence            37899999999999999999999999999999999 99988888888776 45667899999999999            


Q ss_pred             -----HHHHHHHHHHHHhCCCCEEEEcCCCCCCCCcccccc--------------HHHHHHHHHHHHHHHHHHHHHHhhh
Q 027248           75 -----QRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTK--------------ESVLDKLWDINVKSSILLLQDAAPH  135 (226)
Q Consensus        75 -----~v~~~~~~~~~~~~~id~li~nag~~~~~~~~~~~~--------------~~~~~~~~~~N~~~~~~~~~~~~~~  135 (226)
                           +++++++++.+.++++|+||||||+.. ..++.+.+              .++|++++++|+.++++++++++|.
T Consensus       123 ~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~-~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~  201 (328)
T 2qhx_A          123 VTLFTRCAELVAACYTHWGRCDVLVNNASSFY-PTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHR  201 (328)
T ss_dssp             BCHHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             cccHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                 999999999999999999999999875 46677777              8999999999999999999999999


Q ss_pred             hhc--------CCEEEEEeccCCcCCCCCCchhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC-ch
Q 027248          136 LQK--------GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN-DG  205 (226)
Q Consensus       136 l~~--------~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~-~~  205 (226)
                      |++        .++||++||..+..+.++...|++||+|+++|++.|+.|+++ ||+||+|+||+++|++ ...... ..
T Consensus       202 m~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~~~~~~~~~  280 (328)
T 2qhx_A          202 VAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-DMPPAVWEG  280 (328)
T ss_dssp             HHHSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-CSCHHHHHH
T ss_pred             HHhcCCcCCCCCcEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-cccHHHHHH
Confidence            953        479999999999999999999999999999999999999988 9999999999999998 432100 11


Q ss_pred             hhhhhccC-CCCCchhhhccc
Q 027248          206 VVSSVSSL-KLSPPSSLTLAV  225 (226)
Q Consensus       206 ~~~~~~~~-~~~~p~~~a~av  225 (226)
                      +....+.. ++.+|+|+|+++
T Consensus       281 ~~~~~p~~~r~~~pedvA~~v  301 (328)
T 2qhx_A          281 HRSKVPLYQRDSSAAEVSDVV  301 (328)
T ss_dssp             HHTTCTTTTSCBCHHHHHHHH
T ss_pred             HHhhCCCCCCCCCHHHHHHHH
Confidence            22233445 788999999875

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=100.00  E-value=6.3e-42  Score=280.08  Aligned_cols=217  Identities=24%  Similarity=0.343  Sum_probs=186.9

Q ss_pred             cccccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHH
Q 027248            4 MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQT   83 (226)
Q Consensus         4 ~~~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   83 (226)
                      |++..+++||++|||||++|||++++++|+++|++|++++|+.++++...+++   +.++.++.+|+++.++++++++++
T Consensus        22 m~~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~   98 (281)
T 3ppi_A           22 MVTIKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL---GNRAEFVSTNVTSEDSVLAAIEAA   98 (281)
T ss_dssp             --CCGGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             hhhhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHH
Confidence            34456789999999999999999999999999999999999998888877776   567899999999999999999999


Q ss_pred             HHHhCCCCEEEEc-CCCCCCCCcc-----ccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--------CCEEEEEeccC
Q 027248           84 IEKFGKIDVVVSN-AAANPSVDSI-----LQTKESVLDKLWDINVKSSILLLQDAAPHLQK--------GSSVVLISSIA  149 (226)
Q Consensus        84 ~~~~~~id~li~n-ag~~~~~~~~-----~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--------~~~iv~~sS~~  149 (226)
                       ++++++|++||| ||+.. ...+     .+.+.++|++++++|+.++++++++++|.+.+        .++||++||..
T Consensus        99 -~~~~~id~lv~~aag~~~-~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~  176 (281)
T 3ppi_A           99 -NQLGRLRYAVVAHGGFGV-AQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIA  176 (281)
T ss_dssp             -TTSSEEEEEEECCCCCCC-CCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGG
T ss_pred             -HHhCCCCeEEEccCcccc-cccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEeccc
Confidence             788999999999 55443 3333     46888999999999999999999999999853        47999999999


Q ss_pred             CcCCCCCCchhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC--chhhhhhcc-CCCCCchhhhccc
Q 027248          150 GYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN--DGVVSSVSS-LKLSPPSSLTLAV  225 (226)
Q Consensus       150 ~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~-~~~~~p~~~a~av  225 (226)
                      +..+.++...|++||+|+++|+++|+.|+.+ ||+||+|+||+++|++.+.....  ..+....+. .++..|+|+|+++
T Consensus       177 ~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v  256 (281)
T 3ppi_A          177 GYEGQIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVGEEALAKFAANIPFPKRLGTPDEFADAA  256 (281)
T ss_dssp             GTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTTCHHHHHHHHHTCCSSSSCBCHHHHHHHH
T ss_pred             ccCCCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcccHHHHHHHHhcCCCCCCCCCHHHHHHHH
Confidence            9999999999999999999999999999988 99999999999999988765332  112333344 6788999999875

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=100.00  E-value=2.1e-41  Score=272.72  Aligned_cols=206  Identities=22%  Similarity=0.334  Sum_probs=167.4

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      +++||+++||||++|||++++++|+++|++|++++|+++.        .+.  .+..+.+|++++++++++++++.++++
T Consensus         4 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~--------~~~--~~~~~~~D~~d~~~~~~~~~~~~~~~g   73 (250)
T 2fwm_X            4 DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ--------EQY--PFATEVMDVADAAQVAQVCQRLLAETE   73 (250)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS--------SCC--SSEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh--------hcC--CceEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4679999999999999999999999999999999998762        111  267889999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa  166 (226)
                      ++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|+|++  .++||++||..+..+.++...|++||++
T Consensus        74 ~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  152 (250)
T 2fwm_X           74 RLDALVNAAGILR-MGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAA  152 (250)
T ss_dssp             CCCEEEECCCCCC-CCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCCEEEECCCcCC-CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCCchHHHHHHH
Confidence            9999999999875 567888999999999999999999999999999954  5899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCc-----hhhh-------hhccCCCCCchhhhccc
Q 027248          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND-----GVVS-------SVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       167 ~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~-----~~~~-------~~~~~~~~~p~~~a~av  225 (226)
                      +++|+++++.|+++ ||+||+|+||+++|++........     .+..       ..+..++.+|+|+|+++
T Consensus       153 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v  224 (250)
T 2fwm_X          153 LKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTI  224 (250)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEECCC------------------------------------CHHHHHHHH
T ss_pred             HHHHHHHHHHHhCccCCEEEEEECCcccCccccccccChhHHHHHHhhhhhcccccCCCCCCcCHHHHHHHH
Confidence            99999999999988 999999999999999876532111     1211       34455688999999865

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=100.00  E-value=3.2e-41  Score=273.78  Aligned_cols=205  Identities=27%  Similarity=0.356  Sum_probs=180.9

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      +++||+++||||++|||++++++|+++|++|++++|++++           +.++.++.+|++++++++++++++.++++
T Consensus         5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   73 (264)
T 2dtx_A            5 DLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-----------EAKYDHIECDVTNPDQVKASIDHIFKEYG   73 (264)
T ss_dssp             GGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-----------SCSSEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-----------CCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4689999999999999999999999999999999998765           34678899999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa  166 (226)
                      ++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|++  .++||++||..+..+.++...|++||++
T Consensus        74 ~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  152 (264)
T 2dtx_A           74 SISVLVNNAGIES-YGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHA  152 (264)
T ss_dssp             CCCEEEECCCCCC-CBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred             CCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCCCchhHHHHHHH
Confidence            9999999999875 567888999999999999999999999999999964  4799999999999899999999999999


Q ss_pred             HHHHHHHHHHHhCCCeEEEEEecCceeCCcccccc------cC-------chhhhhhccCCCCCchhhhccc
Q 027248          167 LLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYIT------SN-------DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       167 ~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~~~~~------~~-------~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +++|+++|+.|+.+.|+||+|+||+++|++.....      ..       ..+....+..++..|+|+|+++
T Consensus       153 ~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v  224 (264)
T 2dtx_A          153 VIGLTKSIALDYAPLLRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAV  224 (264)
T ss_dssp             HHHHHHHHHHHHTTTSEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCcEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            99999999999976699999999999999876532      11       1122234556789999999875

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=100.00  E-value=9.5e-41  Score=270.41  Aligned_cols=213  Identities=23%  Similarity=0.375  Sum_probs=181.3

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      +++||+++||||++|||++++++|+++|++|++++|+.++++...+++   +.++.++.+|++++++++++++++.++++
T Consensus         9 ~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (265)
T 2o23_A            9 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL---GNNCVFAPADVTSEKDVQTALALAKGKFG   85 (265)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence            578999999999999999999999999999999999998888777666   45788999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCccc------cccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--------CCEEEEEeccCCcCCC
Q 027248           89 KIDVVVSNAAANPSVDSIL------QTKESVLDKLWDINVKSSILLLQDAAPHLQK--------GSSVVLISSIAGYQPQ  154 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~------~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--------~~~iv~~sS~~~~~~~  154 (226)
                      ++|+||||||.... .++.      +.+.++|++++++|+.+++++++++.|.|++        .++||++||..+..+.
T Consensus        86 ~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~  164 (265)
T 2o23_A           86 RVDVAVNCAGIAVA-SKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ  164 (265)
T ss_dssp             CCCEEEECCCCCCC-CCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC
T ss_pred             CCCEEEECCccCCC-CccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCC
Confidence            99999999998753 3333      4788999999999999999999999999854        3689999999998888


Q ss_pred             CCCchhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC--chhhhhhcc-CCCCCchhhhccc
Q 027248          155 SSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN--DGVVSSVSS-LKLSPPSSLTLAV  225 (226)
Q Consensus       155 ~~~~~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~-~~~~~p~~~a~av  225 (226)
                      ++...|++||+++++|++.++.|+.+ ||+||+|+||+++|++.+.....  ..+....+. .++.+|+|+|+++
T Consensus       165 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  239 (265)
T 2o23_A          165 VGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFPSRLGDPAEYAHLV  239 (265)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----------CHHHHTCSSSCSCBCHHHHHHHH
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccCHHHHHHHHHcCCCcCCCCCHHHHHHHH
Confidence            99999999999999999999999988 99999999999999987654221  122333444 6788999999864

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=100.00  E-value=1.2e-41  Score=274.76  Aligned_cols=206  Identities=24%  Similarity=0.449  Sum_probs=171.5

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      .++++|+++||||++|||++++++|+++|++|++++|++++++           .+.++.+|++++++++++++++.+.+
T Consensus        17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~Dl~d~~~v~~~~~~~~~~~   85 (253)
T 2nm0_A           17 RSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE-----------GFLAVKCDITDTEQVEQAYKEIEETH   85 (253)
T ss_dssp             ---CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-----------TSEEEECCTTSHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc-----------cceEEEecCCCHHHHHHHHHHHHHHc
Confidence            4577999999999999999999999999999999999886543           26688999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHH
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKT  165 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKa  165 (226)
                      +++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|++  .++||++||..+..+.++...|++||+
T Consensus        86 g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  164 (253)
T 2nm0_A           86 GPVEVLIANAGVTK-DQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAASKA  164 (253)
T ss_dssp             CSCSEEEEECSCCT-TTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHHHHHHHHHHHH
T ss_pred             CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCcHHHHHHHH
Confidence            99999999999875 567788889999999999999999999999999854  579999999999888788899999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC--chhhhhhccCCCCCchhhhccc
Q 027248          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN--DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       166 a~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ++++|++.|+.|+++ ||+||+|+||+++|++.......  ..+....+..++.+|+|+|+++
T Consensus       165 a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~i  227 (253)
T 2nm0_A          165 GLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLTDEQRANIVSQVPLGRYARPEEIAATV  227 (253)
T ss_dssp             HHHHHHHHHHHHHCSSSEEEEEEEECSBCC---------CHHHHHTTCTTCSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            999999999999998 99999999999999987653221  1122334556788999999865

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=100.00  E-value=2e-40  Score=267.76  Aligned_cols=219  Identities=25%  Similarity=0.350  Sum_probs=190.9

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      .+++++|+++||||++|||++++++|+++|++|++++|++++.+...+++...+.++.++.+|++++++++++++++.+.
T Consensus         8 ~~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (260)
T 3awd_A            8 KLRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQ   87 (260)
T ss_dssp             GGCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999998888888888777778999999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCC--chhhH
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSM--AMYGV  162 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~--~~Y~~  162 (226)
                      ++++|+||||||......++.+.+.++|++++++|+.+++++++++.|.|++  .++||++||..+..+.++.  ..|++
T Consensus        88 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~Y~~  167 (260)
T 3awd_A           88 EGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNA  167 (260)
T ss_dssp             HSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCCHHHHH
T ss_pred             cCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCCCCccccHH
Confidence            9999999999998653466788899999999999999999999999999853  5799999999988777777  89999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCccc-ccccCc---hhhhhhccCCCCCchhhhccc
Q 027248          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAE-YITSND---GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       163 sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~-~~~~~~---~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ||++++.|++.++.|+.+ ||++++|+||+++|++.. ....+.   .+....+..++..|+|+|+++
T Consensus       168 sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  235 (260)
T 3awd_A          168 SKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPMGRVGQPDEVASVV  235 (260)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCHHHHHHHHHTCTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCChHHHHHHHhcCCcCCCCCHHHHHHHH
Confidence            999999999999999988 999999999999999876 322111   112233455688999999875

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=100.00  E-value=2e-41  Score=274.25  Aligned_cols=216  Identities=24%  Similarity=0.304  Sum_probs=178.3

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH-h
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK-F   87 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~   87 (226)
                      +++||+++||||++|||++++++|+++|++|++++|++++++...+++...+.++.++.+|++++++++.+++++.+. +
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   81 (260)
T 2qq5_A            2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQ   81 (260)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            357899999999999999999999999999999999998888888888776778899999999999999999999886 8


Q ss_pred             CCCCEEEEcCCCCC------CCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCch
Q 027248           88 GKIDVVVSNAAANP------SVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAM  159 (226)
Q Consensus        88 ~~id~li~nag~~~------~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~  159 (226)
                      +++|+||||||...      ...++.+.+.++|++++++|+.++++++++++|.|++  .++||++||..+..+. +...
T Consensus        82 g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-~~~~  160 (260)
T 2qq5_A           82 GRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYM-FNVP  160 (260)
T ss_dssp             TCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSCC-SSHH
T ss_pred             CCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCCC-CCCc
Confidence            99999999995321      1356778888999999999999999999999999854  4899999999887643 4688


Q ss_pred             hhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchh-----hh--hhccCCCCCchhhhccc
Q 027248          160 YGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGV-----VS--SVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       160 Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~-----~~--~~~~~~~~~p~~~a~av  225 (226)
                      |++||+++++|+++|+.|+++ ||+||+|+||+++|++..........     ..  ..+..+..+|+|+|+++
T Consensus       161 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~v  234 (260)
T 2qq5_A          161 YGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELSGKCV  234 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC----------------------CHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccccccchhHHHHHHhhhccCCCHHHHHHHH
Confidence            999999999999999999988 99999999999999997654322111     00  01122346799998764

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=100.00  E-value=5.1e-41  Score=271.87  Aligned_cols=218  Identities=28%  Similarity=0.401  Sum_probs=183.3

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcC-------CcEEEEEeeCCCHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG-------IEVIGVVCHVSNGQQRKNL   79 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~Dv~~~~~v~~~   79 (226)
                      ..++++|+++||||++|||++++++|+++|++|++++|++++++...+++...+       .++.++.+|++++++++++
T Consensus         2 ~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   81 (264)
T 2pd6_A            2 QNRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCL   81 (264)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHH
Confidence            345689999999999999999999999999999999999888777766654443       5678899999999999999


Q ss_pred             HHHHHHHhCCC-CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc---CCEEEEEeccCCcCCCC
Q 027248           80 INQTIEKFGKI-DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQS  155 (226)
Q Consensus        80 ~~~~~~~~~~i-d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~---~~~iv~~sS~~~~~~~~  155 (226)
                      ++.+.+.++++ |+||||||... ..++.+.+.++|++++++|+.|++++++++.|.|++   .++||++||..+..+.+
T Consensus        82 ~~~~~~~~g~i~d~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  160 (264)
T 2pd6_A           82 LEQVQACFSRPPSVVVSCAGITQ-DEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNV  160 (264)
T ss_dssp             HHHHHHHHSSCCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCT
T ss_pred             HHHHHHHhCCCCeEEEECCCcCC-CcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCCC
Confidence            99999999998 99999999875 567788899999999999999999999999999854   46999999998888889


Q ss_pred             CCchhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC--chhhhhhccCCCCCchhhhccc
Q 027248          156 SMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN--DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       156 ~~~~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +...|++||++++.|++.++.|+.+ ||++++++||+++|++.......  ..+....+..++.+|+|+|+++
T Consensus       161 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  233 (264)
T 2pd6_A          161 GQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQKVVDKITEMIPMGHLGDPEDVADVV  233 (264)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC----------CTGGGCTTCSCBCHHHHHHHH
T ss_pred             CChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcCHHHHHHHHHhCCCCCCCCHHHHHHHH
Confidence            9999999999999999999999988 99999999999999987643221  1122333445678999999875

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=100.00  E-value=1.4e-41  Score=273.33  Aligned_cols=206  Identities=23%  Similarity=0.435  Sum_probs=171.5

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      .+++||+++||||++|||++++++|+++|++|++++|++++++..           ..+.+|++++++++++++++.+.+
T Consensus        11 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~-----------~~~~~D~~~~~~~~~~~~~~~~~~   79 (247)
T 1uzm_A           11 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGL-----------FGVEVDVTDSDAVDRAFTAVEEHQ   79 (247)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTS-----------EEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHh-----------cCeeccCCCHHHHHHHHHHHHHHc
Confidence            357899999999999999999999999999999999988654321           147899999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHH
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKT  165 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKa  165 (226)
                      +++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|++  .++||++||..+..+.++...|++||+
T Consensus        80 g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  158 (247)
T 1uzm_A           80 GPVEVLVSNAGLSA-DAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKA  158 (247)
T ss_dssp             SSCSEEEEECSCCC------CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHHH
T ss_pred             CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCCCChhHHHHHH
Confidence            99999999999875 567788999999999999999999999999999954  479999999999888899999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC--chhhhhhccCCCCCchhhhccc
Q 027248          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN--DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       166 a~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ++++|+++|+.|+++ ||+||+|+||+++|++.+.....  ..+....+..++.+|+|+|+++
T Consensus       159 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~  221 (247)
T 1uzm_A          159 GVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVV  221 (247)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHHHHHHHGGGCTTCSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            999999999999988 99999999999999987653211  1122334556788999999865

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=100.00  E-value=2.4e-41  Score=267.86  Aligned_cols=192  Identities=23%  Similarity=0.324  Sum_probs=171.4

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+                    +|+++++++++++++    ++
T Consensus         3 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~--------------------~D~~~~~~v~~~~~~----~g   58 (223)
T 3uce_A            3 GSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG--------------------LDISDEKSVYHYFET----IG   58 (223)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT--------------------CCTTCHHHHHHHHHH----HC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc--------------------cCCCCHHHHHHHHHH----hC
Confidence            467999999999999999999999999999999999875                    799999999988875    48


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHhHHHHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALL  168 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~  168 (226)
                      ++|+||||||+.....++.+.+.++|++++++|+.++++++++++|+|+++++||++||..+..+.++...|++||+|++
T Consensus        59 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~asK~a~~  138 (223)
T 3uce_A           59 AFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVVANTYVKAAINAAIE  138 (223)
T ss_dssp             SEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCCCCchHHHHHHHHHH
Confidence            99999999998754678899999999999999999999999999999988899999999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCeEEEEEecCceeCCcccccccCc------hhhhhhccCCCCCchhhhccc
Q 027248          169 GLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSND------GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       169 ~~~~~la~e~~~~i~v~~v~Pg~v~t~~~~~~~~~~------~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +|+++|+.|+++ |+||+|+||+++|++.+......      .+....+..++..|+|+|+++
T Consensus       139 ~~~~~la~e~~~-i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~  200 (223)
T 3uce_A          139 ATTKVLAKELAP-IRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPVGKVGEASDIAMAY  200 (223)
T ss_dssp             HHHHHHHHHHTT-SEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHSTTCSCBCHHHHHHHH
T ss_pred             HHHHHHHHhhcC-cEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCCCCCccCHHHHHHHH
Confidence            999999999988 99999999999999887654321      133455677889999999864

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=100.00  E-value=2.9e-40  Score=264.63  Aligned_cols=206  Identities=20%  Similarity=0.334  Sum_probs=186.4

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCC-------eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHH
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGA-------SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTI   84 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~-------~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (226)
                      +|+++||||++|||++++++|+++|+       +|++++|++++++...+++...+.++.++.+|++++++++++++++.
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV   81 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence            68999999999999999999999999       99999999988888888887667788999999999999999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhH
Q 027248           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGV  162 (226)
Q Consensus        85 ~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~  162 (226)
                      +.++++|+||||||... ..++.+.+.++|++++++|+.++++++++++|+|++  .++||++||..+..+.++...|++
T Consensus        82 ~~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  160 (244)
T 2bd0_A           82 ERYGHIDCLVNNAGVGR-FGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCM  160 (244)
T ss_dssp             HHTSCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             HhCCCCCEEEEcCCcCC-cCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCCCCCchhHH
Confidence            99999999999999875 567888899999999999999999999999999853  579999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       163 sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ||+++++|+++++.|+.+ ||++++|+||+++|++........       ..++.+|+|+|+++
T Consensus       161 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~-------~~~~~~~~dva~~~  217 (244)
T 2bd0_A          161 SKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDEM-------QALMMMPEDIAAPV  217 (244)
T ss_dssp             HHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCSTT-------GGGSBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhccccc-------cccCCCHHHHHHHH
Confidence            999999999999999988 999999999999999876542211       23678999998764

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=100.00  E-value=1.8e-40  Score=269.17  Aligned_cols=218  Identities=29%  Similarity=0.424  Sum_probs=168.4

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      .+++++|+++||||++|||++++++|+++|++|++++|++++++...+++...+.++.++.+|++++++++++++++.+.
T Consensus         9 ~~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   88 (266)
T 1xq1_A            9 RWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSM   88 (266)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999998888888888777778899999999999999999999999


Q ss_pred             h-CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHh
Q 027248           87 F-GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVT  163 (226)
Q Consensus        87 ~-~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~s  163 (226)
                      + +++|+||||||... ..++.+.+.++|++++++|+.++++++++++|.|++  .++||++||..+..+.++...|++|
T Consensus        89 ~~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  167 (266)
T 1xq1_A           89 FGGKLDILINNLGAIR-SKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSAT  167 (266)
T ss_dssp             HTTCCSEEEEECCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHHH
T ss_pred             hCCCCcEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCCCCchHHHH
Confidence            9 89999999999875 567778899999999999999999999999999854  5899999999998888899999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCc---hhhhhhccCCCCCchhhhccc
Q 027248          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND---GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       164 Kaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~p~~~a~av  225 (226)
                      |++++.|+++++.|+.+ ||++++|+||++.|++.+......   .+....+..++..|+|+|+++
T Consensus       168 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  233 (266)
T 1xq1_A          168 KGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLV  233 (266)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-------------------------CCGGGGHHHH
T ss_pred             HHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            99999999999999988 999999999999999876543211   122223445678999999875

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=100.00  E-value=1.6e-41  Score=272.29  Aligned_cols=203  Identities=23%  Similarity=0.264  Sum_probs=177.2

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHh-CCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGL-EGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~-~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      .++|+++||||++|||++++++|++ .|++|++.+|+++..          ...+.++.+|++++++++++++.+.  ++
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~~~~--~~   69 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS----------AENLKFIKADLTKQQDITNVLDIIK--NV   69 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC----------CTTEEEEECCTTCHHHHHHHHHHTT--TC
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc----------cccceEEecCcCCHHHHHHHHHHHH--hC
Confidence            3679999999999999999999999 789999999987521          2246789999999999999995443  78


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHhHHHHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALL  168 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~  168 (226)
                      ++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|+++++||++||..+..+.++...|++||+|++
T Consensus        70 ~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~asKaa~~  148 (244)
T 4e4y_A           70 SFDGIFLNAGILI-KGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAKPNSFAYTLSKGAIA  148 (244)
T ss_dssp             CEEEEEECCCCCC-CBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCCTTBHHHHHHHHHHH
T ss_pred             CCCEEEECCccCC-CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCCCCCchhHHHHHHHH
Confidence            9999999999876 578889999999999999999999999999999987789999999999999999999999999999


Q ss_pred             HHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC-------------chhhhhhccCCCCCchhhhccc
Q 027248          169 GLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN-------------DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       169 ~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~-------------~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +|+++|+.|+++ ||+||+|+||+++|++.+.....             .......+..++.+|+|+|+++
T Consensus       149 ~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v  219 (244)
T 4e4y_A          149 QMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELV  219 (244)
T ss_dssp             HHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTSTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCCCCCCcCHHHHHHHH
Confidence            999999999988 99999999999999987654321             1233445667789999999875

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=100.00  E-value=7.9e-41  Score=273.47  Aligned_cols=212  Identities=27%  Similarity=0.393  Sum_probs=182.3

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      +++|+++||||++|||++++++|+++|++|++++|+.++++...+++   +.++.++.+|++++++++++++++.+++++
T Consensus         3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~   79 (281)
T 3m1a_A            3 ESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY---PDRAEAISLDVTDGERIDVVAADVLARYGR   79 (281)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHC---TTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---cCCceEEEeeCCCHHHHHHHHHHHHHhCCC
Confidence            46899999999999999999999999999999999998887766543   457889999999999999999999999999


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHHH
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~  167 (226)
                      +|+||||||... ..++.+.+.++|++++++|+.|+++++++++|.|++  .++||++||..+..+.++...|++||+++
T Consensus        80 id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  158 (281)
T 3m1a_A           80 VDVLVNNAGRTQ-VGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAGFSAYSATKAAL  158 (281)
T ss_dssp             CSEEEECCCCEE-ECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHH
T ss_pred             CCEEEECCCcCC-CCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCCCchHHHHHHHHH
Confidence            999999999875 567888999999999999999999999999999954  57999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCC-CeEEEEEecCceeCCccccccc-----Cchh----------hhhhccCCCCCchhhhccc
Q 027248          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS-----NDGV----------VSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       168 ~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~-----~~~~----------~~~~~~~~~~~p~~~a~av  225 (226)
                      ++|+++|+.|+++ ||+|++|+||+++|++......     ...+          ........+..|+|+|+++
T Consensus       159 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~  232 (281)
T 3m1a_A          159 EQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDGSQPGDPAKAAAAI  232 (281)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC-----CBCHHHHHHHH
T ss_pred             HHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhccCCCCCCHHHHHHHH
Confidence            9999999999998 9999999999999998653211     0111          1112334578899999875

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=100.00  E-value=1.5e-41  Score=272.12  Aligned_cols=200  Identities=16%  Similarity=0.146  Sum_probs=175.0

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh-
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF-   87 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   87 (226)
                      ..++|+++||||++|||++++++|+++|++|++++|++++.+          ....++.+|++++++++++++++.+.+ 
T Consensus         4 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~----------~~~~~~~~D~~~~~~v~~~~~~~~~~~~   73 (241)
T 1dhr_A            4 SGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA----------SASVIVKMTDSFTEQADQVTAEVGKLLG   73 (241)
T ss_dssp             --CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS----------SEEEECCCCSCHHHHHHHHHHHHHHHHT
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc----------CCcEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            456899999999999999999999999999999999987542          135677899999999999999999999 


Q ss_pred             -CCCCEEEEcCCCCCCCCcc-ccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHhHH
Q 027248           88 -GKIDVVVSNAAANPSVDSI-LQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKT  165 (226)
Q Consensus        88 -~~id~li~nag~~~~~~~~-~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~sKa  165 (226)
                       +++|+||||||+.. ..++ .+.+.++|++++++|+.++++++++++|+|+++++||++||..+..+.++...|++||+
T Consensus        74 ~g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  152 (241)
T 1dhr_A           74 DQKVDAILCVAGGWA-GGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPGMIGYGMAKG  152 (241)
T ss_dssp             TCCEEEEEECCCCCC-CBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHH
T ss_pred             CCCCCEEEEcccccC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCCCCchHHHHHHH
Confidence             79999999999875 4556 78889999999999999999999999999977789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhC--C-CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          166 ALLGLTKALAAEMA--P-DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       166 a~~~~~~~la~e~~--~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ++++|+++|+.|++  + ||+||+|+||+++|++.........      .....+|+|+|+++
T Consensus       153 a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~------~~~~~~~~~vA~~v  209 (241)
T 1dhr_A          153 AVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPEAD------FSSWTPLEFLVETF  209 (241)
T ss_dssp             HHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTTSC------GGGSEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHhccCCCCeEEEEEecCcccCccccccCcchh------hccCCCHHHHHHHH
Confidence            99999999999998  7 9999999999999998765432221      12356789998764

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=100.00  E-value=1.6e-40  Score=267.79  Aligned_cols=218  Identities=27%  Similarity=0.424  Sum_probs=189.9

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecC-cchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRK-QKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      .+++||+++||||++|||++++++|+++|++|++++|+ +++++...+++...+.++.++.+|++++++++++++++.++
T Consensus         3 ~~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (258)
T 3afn_B            3 PDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAK   82 (258)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999 88888888888777778999999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc-C------CEEEEEeccCCcC-CCCCCc
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-G------SSVVLISSIAGYQ-PQSSMA  158 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~-~------~~iv~~sS~~~~~-~~~~~~  158 (226)
                      ++++|+||||||......++.+.+.++|++++++|+.++++++++++|.|++ +      ++||++||..+.. +.++..
T Consensus        83 ~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~  162 (258)
T 3afn_B           83 FGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAG  162 (258)
T ss_dssp             HSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCCTTCH
T ss_pred             cCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCCCCch
Confidence            9999999999997333567888999999999999999999999999999843 2      7999999998877 778899


Q ss_pred             hhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC--chhhhhhccCCCCCchhhhccc
Q 027248          159 MYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN--DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       159 ~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      .|++||++++.+++.++.|+.+ ||++++++||+++|++.......  ..+....+..++..|+|+|+++
T Consensus       163 ~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  232 (258)
T 3afn_B          163 LYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKTQDVRDRISNGIPMGRFGTAEEMAPAF  232 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTCCHHHHHHHHTTCTTCSCBCGGGTHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccccCHHHHHHHhccCCCCcCCCHHHHHHHH
Confidence            9999999999999999999988 99999999999999987653111  1122233445688999999865

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=100.00  E-value=1.5e-40  Score=266.65  Aligned_cols=218  Identities=26%  Similarity=0.437  Sum_probs=189.3

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHh-cCCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA-RGIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      ..+++||+++||||++|||++++++|+++|++|++++|++++++...+++.+ .+.++.++.+|++++++++++++++.+
T Consensus         2 ~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (248)
T 2pnf_A            2 EIKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYN   81 (248)
T ss_dssp             CCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            3457899999999999999999999999999999999998888777777655 356788999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHh
Q 027248           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVT  163 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~s  163 (226)
                      .++++|+||||||... ..++.+.+.++|++.+++|+.++++++++++|.|++  .++||++||..+..+.++...|++|
T Consensus        82 ~~~~~d~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  160 (248)
T 2pnf_A           82 LVDGIDILVNNAGITR-DKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTT  160 (248)
T ss_dssp             HSSCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHH
T ss_pred             hcCCCCEEEECCCCCC-CCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCCCCchHHHH
Confidence            9999999999999875 567788899999999999999999999999999854  4799999999888888889999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC--chhhhhhccCCCCCchhhhccc
Q 027248          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN--DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       164 Kaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      |++++.+++.++.|+.+ +|++++++||+++|++...+...  ..+....+..++..|+|+|+++
T Consensus       161 K~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  225 (248)
T 2pnf_A          161 KAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLSEEIKQKYKEQIPLGRFGSPEEVANVV  225 (248)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHTCTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhccHHHHHHHHhcCCCCCccCHHHHHHHH
Confidence            99999999999999988 99999999999999987653211  1122223456688999999864

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=100.00  E-value=5.3e-42  Score=286.64  Aligned_cols=190  Identities=18%  Similarity=0.185  Sum_probs=164.2

Q ss_pred             CCCEEEEEcCCC--chhHHHHHHHHhCCCeEEEEecCc---------chHHHHHHHHHhc---CCcEEEEEeeCCCH--H
Q 027248           11 QGKVAIVTASTQ--GIGFGIAERLGLEGASVVVSSRKQ---------KNVDEAVVKLKAR---GIEVIGVVCHVSNG--Q   74 (226)
Q Consensus        11 ~gk~vlItGa~~--giG~a~~~~l~~~g~~v~~~~r~~---------~~~~~~~~~~~~~---~~~~~~~~~Dv~~~--~   74 (226)
                      .+|++|||||++  |||++++++|+++|++|++++|++         ++.+.........   ...+.++.+|+++.  +
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   80 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence            379999999985  999999999999999999777654         2222222111111   22367889999988  8


Q ss_pred             ------------------HHHHHHHHHHHHhCCCCEEEEcCCCCC-CCCccccccHHHHHHHHHHHHHHHHHHHHHHhhh
Q 027248           75 ------------------QRKNLINQTIEKFGKIDVVVSNAAANP-SVDSILQTKESVLDKLWDINVKSSILLLQDAAPH  135 (226)
Q Consensus        75 ------------------~v~~~~~~~~~~~~~id~li~nag~~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~  135 (226)
                                        +++++++++.++++++|+||||||+.. ...++.+.+.++|++++++|+.|+++++++++|+
T Consensus        81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~  160 (329)
T 3lt0_A           81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             hhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence                              999999999999999999999999752 3578899999999999999999999999999999


Q ss_pred             hhcCCEEEEEeccCCcCCCCCCc-hhhHhHHHHHHHHHHHHHHhCC--CeEEEEEecCceeCCccccc
Q 027248          136 LQKGSSVVLISSIAGYQPQSSMA-MYGVTKTALLGLTKALAAEMAP--DTRVNCVAPGFVPTHFAEYI  200 (226)
Q Consensus       136 l~~~~~iv~~sS~~~~~~~~~~~-~Y~~sKaa~~~~~~~la~e~~~--~i~v~~v~Pg~v~t~~~~~~  200 (226)
                      |+++|+||++||..+..+.++.. .|++||+|+++|+++|+.|+++  ||+||+|+||+++|+|.+..
T Consensus       161 m~~~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~~~~  228 (329)
T 3lt0_A          161 MKPQSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAI  228 (329)
T ss_dssp             EEEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHTC
T ss_pred             HhhCCeEEEEeCccccCCCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhHhhh
Confidence            98889999999999999999986 9999999999999999999975  99999999999999998765

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=100.00  E-value=3.5e-40  Score=265.51  Aligned_cols=216  Identities=23%  Similarity=0.363  Sum_probs=186.4

Q ss_pred             ccccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcE-EEEEeeCCCHHHHHHHHHHH
Q 027248            5 KMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV-IGVVCHVSNGQQRKNLINQT   83 (226)
Q Consensus         5 ~~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~Dv~~~~~v~~~~~~~   83 (226)
                      +++++++||+++||||++|||++++++|+++|++|++++|++++++...+++   +.++ .++.+|++++++++++++++
T Consensus         4 ~~~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~   80 (254)
T 2wsb_A            4 RTVFRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL---GAAVAARIVADVTDAEAMTAAAAEA   80 (254)
T ss_dssp             TTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGGEEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---cccceeEEEEecCCHHHHHHHHHHH
Confidence            3445688999999999999999999999999999999999988877776665   3356 78899999999999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCC--ch
Q 027248           84 IEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSM--AM  159 (226)
Q Consensus        84 ~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~--~~  159 (226)
                      .+ ++++|+||||||... ..++.+.+.++|++++++|+.++++++++++|.|++  .++||++||..+..+.++.  ..
T Consensus        81 ~~-~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~  158 (254)
T 2wsb_A           81 EA-VAPVSILVNSAGIAR-LHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASS  158 (254)
T ss_dssp             HH-HSCCCEEEECCCCCC-CBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCBHH
T ss_pred             Hh-hCCCcEEEECCccCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCCCcchH
Confidence            88 899999999999875 467778899999999999999999999999999854  5799999999988777777  89


Q ss_pred             hhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchh----hhhhccCCCCCchhhhccc
Q 027248          160 YGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGV----VSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       160 Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~----~~~~~~~~~~~p~~~a~av  225 (226)
                      |++||++++.+++.++.|+.+ ||++++|+||+++|++.+........    ....+..++..|+|+|+++
T Consensus       159 Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  229 (254)
T 2wsb_A          159 YMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTPMGRCGEPSEIAAAA  229 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCHHHHHHHHHTSTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccChHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence            999999999999999999988 99999999999999987654322222    2223445688999999864

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=100.00  E-value=5.2e-40  Score=263.91  Aligned_cols=213  Identities=27%  Similarity=0.389  Sum_probs=185.9

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHH-HhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKL-KARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      +|+++||||++|||++++++|+++|++|++++|++++++...+++ ...+.++.++.+|++++++++++++++.++++++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI   81 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            689999999999999999999999999999999998888777776 4445578899999999999999999999999999


Q ss_pred             CEEEEcCCCCCCCCc---cccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHH
Q 027248           91 DVVVSNAAANPSVDS---ILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKT  165 (226)
Q Consensus        91 d~li~nag~~~~~~~---~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKa  165 (226)
                      |+||||||... ..+   +.+.+.++|++++++|+.++++++++++|.|++  .++||++||..+..+.++...|++||+
T Consensus        82 d~li~~Ag~~~-~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  160 (250)
T 2cfc_A           82 DVLVNNAGITG-NSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKG  160 (250)
T ss_dssp             CEEEECCCCCC-CTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CEEEECCCCCC-CCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCchhHHHHHH
Confidence            99999999865 344   778899999999999999999999999999854  479999999999988899999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchh----hhhhccCCCCCchhhhccc
Q 027248          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGV----VSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       166 a~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~----~~~~~~~~~~~p~~~a~av  225 (226)
                      +++.|++.++.|+.+ ||++++++||+++|++.........+    ....+..++..|+|+|+++
T Consensus       161 a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  225 (250)
T 2cfc_A          161 AVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQKEIGTAAQVADAV  225 (250)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSHHHHHHHHTTCTTCSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            999999999999988 99999999999999987652222222    2233455678999999864

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=100.00  E-value=2.9e-40  Score=264.24  Aligned_cols=204  Identities=30%  Similarity=0.470  Sum_probs=177.3

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id   91 (226)
                      +|+++||||++|||++++++|+++|++|++++|++++   ..+++   +  +..+.+|+++ ++++++++++.+.++++|
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~---~--~~~~~~D~~~-~~~~~~~~~~~~~~g~id   72 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE---AAQSL---G--AVPLPTDLEK-DDPKGLVKRALEALGGLH   72 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHH---T--CEEEECCTTT-SCHHHHHHHHHHHHTSCC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHhh---C--cEEEecCCch-HHHHHHHHHHHHHcCCCC
Confidence            6899999999999999999999999999999999865   22333   2  6778999999 999999999999999999


Q ss_pred             EEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCC--CCCchhhHhHHHH
Q 027248           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQ--SSMAMYGVTKTAL  167 (226)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~--~~~~~Y~~sKaa~  167 (226)
                      +||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|++  .++||++||..+..+.  ++...|++||+++
T Consensus        73 ~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a~  151 (239)
T 2ekp_A           73 VLVHAAAVNV-RKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTAL  151 (239)
T ss_dssp             EEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTSCCHHHHHHHHHH
T ss_pred             EEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCCCCCCccHHHHHHHH
Confidence            9999999875 567888999999999999999999999999999854  5799999999998877  8899999999999


Q ss_pred             HHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch----hhhhhccCCCCCchhhhccc
Q 027248          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG----VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       168 ~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~----~~~~~~~~~~~~p~~~a~av  225 (226)
                      ++|+++++.|+++ ||+||+|+||+++|++.........    +....+..++.+|+|+|+++
T Consensus       152 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~  214 (239)
T 2ekp_A          152 LGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARIPMGRWARPEEIARVA  214 (239)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHTTCTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            9999999999988 9999999999999998765421222    22234556788999999865

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=100.00  E-value=1.2e-40  Score=267.10  Aligned_cols=215  Identities=30%  Similarity=0.491  Sum_probs=168.2

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEE-ecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      ++||+++||||++|||++++++|+++|++|+++ .|+++.++...+++...+.++.++.+|++++++++++++++.+.++
T Consensus         3 l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (247)
T 2hq1_A            3 LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFG   82 (247)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            578999999999999999999999999999998 6777888888788777777899999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa  166 (226)
                      ++|+||||||... ..++.+.+.++|++.+++|+.++++++++++|.|++  .++||++||..+..+.++...|++||++
T Consensus        83 ~~d~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  161 (247)
T 2hq1_A           83 RIDILVNNAGITR-DTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKAG  161 (247)
T ss_dssp             CCCEEEECC----------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC---------CHHHHHHHHH
T ss_pred             CCCEEEECCCCCC-CCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcHhHHHHHH
Confidence            9999999999875 456777888999999999999999999999999854  4799999999888888899999999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC--chhhhhhccCCCCCchhhhccc
Q 027248          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN--DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       167 ~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ++.+++.++.|+.+ +|++|+++||+++|++.......  ..+....+..++..|+|+|+++
T Consensus       162 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  223 (247)
T 2hq1_A          162 LIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVLPDKVKEMYLNNIPLKRFGTPEEVANVV  223 (247)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHTTSTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhcchHHHHHHHhhCCCCCCCCHHHHHHHH
Confidence            99999999999988 99999999999999986543211  1122233456688999999864

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=100.00  E-value=6.9e-41  Score=266.34  Aligned_cols=200  Identities=21%  Similarity=0.273  Sum_probs=167.5

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCE
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~   92 (226)
                      |+++||||++|||++++++|+++|++|++++|++++++...+++   +.++.++.+|+++.++++++++++.+   .+|+
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~---~~d~   75 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL---SNNVGYRARDLASHQEVEQLFEQLDS---IPST   75 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC---SSCCCEEECCTTCHHHHHHHHHSCSS---CCSE
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH---hhccCeEeecCCCHHHHHHHHHHHhh---cCCE
Confidence            68999999999999999999999999999999998877766655   45678899999999999998887643   3499


Q ss_pred             EEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc-CCEEEEEeccCCcCCCCCCchhhHhHHHHHHHH
Q 027248           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLT  171 (226)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~-~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~  171 (226)
                      ||||||... ..++.+.+.++|++++++|+.|+++++++++|.|++ +++||++||..+..+.++.+.|++||+|+++|+
T Consensus        76 lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~  154 (230)
T 3guy_A           76 VVHSAGSGY-FGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPKAQESTYCAVKWAVKGLI  154 (230)
T ss_dssp             EEECCCCCC-CSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHH
T ss_pred             EEEeCCcCC-CCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCCCCCCchhHHHHHHHHHHH
Confidence            999999876 678889999999999999999999999999999965 459999999999999999999999999999999


Q ss_pred             HHHHHHhCC-CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          172 KALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       172 ~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ++|+.|+++ ||+||+|+||+++|++.+....      ..+..++.+|+|+|+++
T Consensus       155 ~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~------~~~~~~~~~~~dvA~~i  203 (230)
T 3guy_A          155 ESVRLELKGKPMKIIAVYPGGMATEFWETSGK------SLDTSSFMSAEDAALMI  203 (230)
T ss_dssp             HHHHHHTTTSSCEEEEEEECCC----------------------CCCHHHHHHHH
T ss_pred             HHHHHHHHhcCeEEEEEECCcccChHHHhcCC------CCCcccCCCHHHHHHHH
Confidence            999999998 9999999999999998766432      23456789999999875

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=4.9e-40  Score=268.57  Aligned_cols=216  Identities=25%  Similarity=0.430  Sum_probs=185.3

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcC--CcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG--IEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      +++||+++||||++|||++++++|+++|++|++++|+.++++...+++...+  .++.++.+|++++++++++++++.+.
T Consensus        29 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  108 (279)
T 1xg5_A           29 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ  108 (279)
T ss_dssp             GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence            5789999999999999999999999999999999999988888888877654  45788999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc-C---CEEEEEeccCCc--CCCCCCchh
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-G---SSVVLISSIAGY--QPQSSMAMY  160 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~-~---~~iv~~sS~~~~--~~~~~~~~Y  160 (226)
                      ++++|+||||||... ..++.+.+.++|++++++|+.+++.+++.++|.|++ +   ++||++||..+.  .+.++...|
T Consensus       109 ~g~iD~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y  187 (279)
T 1xg5_A          109 HSGVDICINNAGLAR-PDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFY  187 (279)
T ss_dssp             HCCCSEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHHH
T ss_pred             CCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCCCCCchh
Confidence            999999999999875 567778899999999999999999999999999864 2   799999999887  566778899


Q ss_pred             hHhHHHHHHHHHHHHHHhC--C-CeEEEEEecCceeCCcccccccC--chhhhhhccCCCCCchhhhccc
Q 027248          161 GVTKTALLGLTKALAAEMA--P-DTRVNCVAPGFVPTHFAEYITSN--DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       161 ~~sKaa~~~~~~~la~e~~--~-~i~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ++||+++++|++.++.|+.  + +|++++|+||+++|++.......  ..........++..|+|+|+++
T Consensus       188 ~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~i  257 (279)
T 1xg5_A          188 SATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCLKPEDVAEAV  257 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHHHC---CBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccChhHHhhhcccccCCCHHHHHHHH
Confidence            9999999999999999996  6 99999999999999985432221  1122233445678999999865

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=100.00  E-value=1.2e-40  Score=267.80  Aligned_cols=211  Identities=28%  Similarity=0.453  Sum_probs=168.0

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      ..++++|+++||||++|||++++++|+++|++|++++|+.++++...+++.   .++.++.+|+++.+++++++++    
T Consensus         9 ~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~----   81 (249)
T 3f9i_A            9 MIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK---DNYTIEVCNLANKEECSNLISK----   81 (249)
T ss_dssp             CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---SSEEEEECCTTSHHHHHHHHHT----
T ss_pred             cccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc---cCccEEEcCCCCHHHHHHHHHh----
Confidence            456789999999999999999999999999999999999988887776663   4688899999999998877764    


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhH
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTK  164 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sK  164 (226)
                      .+++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|++  .++||++||..+..+.++...|++||
T Consensus        82 ~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  160 (249)
T 3f9i_A           82 TSNLDILVCNAGITS-DTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASK  160 (249)
T ss_dssp             CSCCSEEEECCC--------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCSCSHHHHHHH
T ss_pred             cCCCCEEEECCCCCC-CCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCCCCchhHHHH
Confidence            478999999999876 466778888999999999999999999999999843  57999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC--chhhhhhccCCCCCchhhhccc
Q 027248          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN--DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       165 aa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +|+++|+++|+.|+.+ ||+|++|+||+++|++.+.....  ..+....+..++..|+|+|+++
T Consensus       161 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  224 (249)
T 3f9i_A          161 AGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNEKQREAIVQKIPLGTYGIPEDVAYAV  224 (249)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CCHHHHHHHHHHCTTCSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            9999999999999988 99999999999999998765432  2234455677889999999875

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=100.00  E-value=3.9e-40  Score=264.78  Aligned_cols=215  Identities=25%  Similarity=0.377  Sum_probs=186.3

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      ++++|+++||||++|||++++++|+++|++|++++|+++.++...+++... .++.++.+|++++++++++++++.+.++
T Consensus         3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (251)
T 1zk4_A            3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP-DQIQFFQHDSSDEDGWTKLFDATEKAFG   81 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT-TTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcc-CceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            467899999999999999999999999999999999988777766665432 5688999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcC---CEEEEEeccCCcCCCCCCchhhHhHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKG---SSVVLISSIAGYQPQSSMAMYGVTKT  165 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~---~~iv~~sS~~~~~~~~~~~~Y~~sKa  165 (226)
                      ++|+||||||... ..++.+.+.++|++++++|+.+++++++.++|.|++.   ++||++||..+..+.++...|++||+
T Consensus        82 ~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  160 (251)
T 1zk4_A           82 PVSTLVNNAGIAV-NKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKG  160 (251)
T ss_dssp             SCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCCEEEECCCCCC-CCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCCCCccchHHHH
Confidence            9999999999875 5677888999999999999999999999999998652   68999999999988899999999999


Q ss_pred             HHHHHHHHHHHHhC--C-CeEEEEEecCceeCCcccccccCch---hhhhhccCCCCCchhhhccc
Q 027248          166 ALLGLTKALAAEMA--P-DTRVNCVAPGFVPTHFAEYITSNDG---VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       166 a~~~~~~~la~e~~--~-~i~v~~v~Pg~v~t~~~~~~~~~~~---~~~~~~~~~~~~p~~~a~av  225 (226)
                      +++.+++.++.|+.  + +|++++|+||+++|++.........   +....+..++..|+|+|+++
T Consensus       161 a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  226 (251)
T 1zk4_A          161 AVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYIC  226 (251)
T ss_dssp             HHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcCchhhhHHHhhcCCCCCCcCHHHHHHHH
Confidence            99999999999986  6 9999999999999998765421111   11223445678999999864

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=100.00  E-value=2.8e-40  Score=270.96  Aligned_cols=217  Identities=27%  Similarity=0.422  Sum_probs=187.6

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      ..+++|+++||||++|||++++++|+++|++|++++|++++++...+++.+.+.++.++.+|++++++++++++++.+.+
T Consensus        40 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  119 (285)
T 2c07_A           40 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEH  119 (285)
T ss_dssp             CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhc
Confidence            35678999999999999999999999999999999999888888888887767788999999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHH
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKT  165 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKa  165 (226)
                      +++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|++  .++||++||..+..+.++...|++||+
T Consensus       120 ~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~  198 (285)
T 2c07_A          120 KNVDILVNNAGITR-DNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKA  198 (285)
T ss_dssp             SCCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHH
T ss_pred             CCCCEEEECCCCCC-CCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCCchHHHHHH
Confidence            99999999999875 567788899999999999999999999999999854  479999999998888899999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC--chhhhhhccCCCCCchhhhccc
Q 027248          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN--DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       166 a~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +++.|+++++.|+.+ ||+|++|+||+++|++.......  ..+....+..++..|+|+|+++
T Consensus       199 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~  261 (285)
T 2c07_A          199 GVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIISNIPAGRMGTPEEVANLA  261 (285)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHHHHTTCTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcCHHHHHHHHhhCCCCCCCCHHHHHHHH
Confidence            999999999999988 99999999999999987653211  1122334556788999999864

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=100.00  E-value=3.3e-40  Score=272.60  Aligned_cols=193  Identities=28%  Similarity=0.371  Sum_probs=168.6

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcC-CcEEEEEeeCCCH-HHHHHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG-IEVIGVVCHVSNG-QQRKNLINQTI   84 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~-~~v~~~~~~~~   84 (226)
                      ...+++|++|||||++|||++++++|+++|++|++++|+.+++++..+++.+.+ .++.++.+|++++ ++++.+++.+.
T Consensus         7 ~~~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~   86 (311)
T 3o26_A            7 NTVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIK   86 (311)
T ss_dssp             -----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHH
T ss_pred             CccCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHH
Confidence            345789999999999999999999999999999999999999999888887765 4688999999998 99999999999


Q ss_pred             HHhCCCCEEEEcCCCCCC-----------------------------CCccccccHHHHHHHHHHHHHHHHHHHHHHhhh
Q 027248           85 EKFGKIDVVVSNAAANPS-----------------------------VDSILQTKESVLDKLWDINVKSSILLLQDAAPH  135 (226)
Q Consensus        85 ~~~~~id~li~nag~~~~-----------------------------~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~  135 (226)
                      +.++++|+||||||+...                             ..++.+.+.++|++++++|+.|+++++++++|+
T Consensus        87 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  166 (311)
T 3o26_A           87 THFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPL  166 (311)
T ss_dssp             HHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             HhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHh
Confidence            999999999999998641                             124456788999999999999999999999999


Q ss_pred             hhc--CCEEEEEeccCCcCCC-------------------------------------------CCCchhhHhHHHHHHH
Q 027248          136 LQK--GSSVVLISSIAGYQPQ-------------------------------------------SSMAMYGVTKTALLGL  170 (226)
Q Consensus       136 l~~--~~~iv~~sS~~~~~~~-------------------------------------------~~~~~Y~~sKaa~~~~  170 (226)
                      |++  .++||++||..+..+.                                           ++...|++||+|+++|
T Consensus       167 l~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~  246 (311)
T 3o26_A          167 LQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAY  246 (311)
T ss_dssp             HTTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHH
T ss_pred             hccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHH
Confidence            964  4799999999876543                                           4567899999999999


Q ss_pred             HHHHHHHhCCCeEEEEEecCceeCCccccc
Q 027248          171 TKALAAEMAPDTRVNCVAPGFVPTHFAEYI  200 (226)
Q Consensus       171 ~~~la~e~~~~i~v~~v~Pg~v~t~~~~~~  200 (226)
                      ++.|+.|+.+ |+||+|+||+|+|+|....
T Consensus       247 ~~~la~e~~~-i~v~~v~PG~v~T~~~~~~  275 (311)
T 3o26_A          247 TRVLANKIPK-FQVNCVCPGLVKTEMNYGI  275 (311)
T ss_dssp             HHHHHHHCTT-SEEEEECCCSBCSGGGTTC
T ss_pred             HHHHHhhcCC-ceEEEecCCceecCCcCCC
Confidence            9999999864 9999999999999997654

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=3.5e-40  Score=268.63  Aligned_cols=209  Identities=22%  Similarity=0.344  Sum_probs=186.5

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      .++++|+++||||++|||++++++|+++|++|++++|++++++...+++.+.+.++.++.+|++++++++++++++.+.+
T Consensus        27 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  106 (272)
T 1yb1_A           27 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI  106 (272)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence            45789999999999999999999999999999999999988888888887777789999999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHH
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKT  165 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKa  165 (226)
                      +++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|++  .++||++||..+..+.++...|++||+
T Consensus       107 g~iD~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  185 (272)
T 1yb1_A          107 GDVSILVNNAGVVY-TSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKF  185 (272)
T ss_dssp             CCCSEEEECCCCCC-CCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHHHH
T ss_pred             CCCcEEEECCCcCC-CcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCchhHHHHHH
Confidence            99999999999875 567788889999999999999999999999999854  479999999999888888899999999


Q ss_pred             HHHHHHHHHHHHhC---C-CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          166 ALLGLTKALAAEMA---P-DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       166 a~~~~~~~la~e~~---~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ++++|++.++.|+.   + ||+|++|+||+++|++.+.        ...+..++.+|+|+|+++
T Consensus       186 a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~--------~~~~~~~~~~~~dva~~i  241 (272)
T 1yb1_A          186 AAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN--------PSTSLGPTLEPEEVVNRL  241 (272)
T ss_dssp             HHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC--------THHHHCCCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcccc--------ccccccCCCCHHHHHHHH
Confidence            99999999999994   4 9999999999999998542        112235678999998764

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=100.00  E-value=2.5e-40  Score=264.85  Aligned_cols=213  Identities=27%  Similarity=0.428  Sum_probs=186.6

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEE-EecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVV-SSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      ||+++||||++|||++++++|+++|++|++ .+|++++.+...+++...+.++.++.+|++++++++++++++.+.++++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI   80 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            689999999999999999999999999988 5888888877777777667788899999999999999999999999999


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHHHH
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALL  168 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~  168 (226)
                      |+||||||... ..++.+.+.++|++++++|+.+++++++++.|+|++  .++||++||..+..+.++...|++||++++
T Consensus        81 d~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  159 (244)
T 1edo_A           81 DVVVNNAGITR-DTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVI  159 (244)
T ss_dssp             SEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHH
T ss_pred             CEEEECCCCCC-CcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCCCCccchhhHHHHH
Confidence            99999999876 567788899999999999999999999999999853  579999999988888889999999999999


Q ss_pred             HHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC--chhhhhhccCCCCCchhhhccc
Q 027248          169 GLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN--DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       169 ~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ++++.++.|+.+ ||++++++||+++|++.......  ..+....+..++..|+|+|+++
T Consensus       160 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  219 (244)
T 1edo_A          160 GFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRTGQPENVAGLV  219 (244)
T ss_dssp             HHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHHHHHHHTSCTTCSCBCHHHHHHHH
T ss_pred             HHHHHHHHHhhhcCCEEEEEeeCccccchhhhcChHHHHHHhhcCCCCCCCCHHHHHHHH
Confidence            999999999987 99999999999999987654221  1122234456688999999865

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=100.00  E-value=4.9e-40  Score=274.09  Aligned_cols=187  Identities=23%  Similarity=0.294  Sum_probs=163.8

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecC-----cchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHH
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRK-----QKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTI   84 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (226)
                      +++|+++||||++|||++++++|+++|++|++++|+     .++++...+.+...+.++.++.+|++++++++++++++.
T Consensus         3 m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~   82 (324)
T 3u9l_A            3 MSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQII   82 (324)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence            468999999999999999999999999999988776     345555566666667789999999999999999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcC-CCCCCchhh
Q 027248           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQ-PQSSMAMYG  161 (226)
Q Consensus        85 ~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~-~~~~~~~Y~  161 (226)
                      +++|++|+||||||+.. .+++.+.+.++|++++++|+.|+++++++++|+|++  .++||++||..+.. +.++.+.|+
T Consensus        83 ~~~g~iD~lVnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~~~~~~Y~  161 (324)
T 3u9l_A           83 GEDGRIDVLIHNAGHMV-FGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPYLAPYF  161 (324)
T ss_dssp             HHHSCCSEEEECCCCCB-CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCCSSCHHHH
T ss_pred             HHcCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCCCcchhHH
Confidence            99999999999999876 678899999999999999999999999999999954  57999999999874 456788999


Q ss_pred             HhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcc
Q 027248          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFA  197 (226)
Q Consensus       162 ~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~  197 (226)
                      +||+|+++|+++|+.|+++ ||+|++|+||+++|++.
T Consensus       162 asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~  198 (324)
T 3u9l_A          162 AAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTN  198 (324)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC-----
T ss_pred             HHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCch
Confidence            9999999999999999988 99999999999998764

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=9.7e-41  Score=268.11  Aligned_cols=207  Identities=26%  Similarity=0.382  Sum_probs=175.0

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      +++||+++||||++|||++++++|+++|++|++++|++++++... ++    .++.++.+|++++++++    ++.+.++
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~----~~~~~~~~D~~~~~~~~----~~~~~~~   73 (246)
T 2ag5_A            3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KY----PGIQTRVLDVTKKKQID----QFANEVE   73 (246)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GS----TTEEEEECCTTCHHHHH----HHHHHCS
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hc----cCceEEEeeCCCHHHHH----HHHHHhC
Confidence            467999999999999999999999999999999999876654433 22    26788999999999987    4455678


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCC-CCchhhHhHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQS-SMAMYGVTKT  165 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~-~~~~Y~~sKa  165 (226)
                      ++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|+|++  .++||++||..+..+.+ +...|++||+
T Consensus        74 ~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~~sK~  152 (246)
T 2ag5_A           74 RLDVLFNVAGFVH-HGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKA  152 (246)
T ss_dssp             CCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHHH
T ss_pred             CCCEEEECCccCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCCCCCccHHHHHH
Confidence            9999999999876 567888999999999999999999999999999853  57999999999888877 8899999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCceeCCccccccc----Cc----hhhhhhccCCCCCchhhhccc
Q 027248          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS----ND----GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       166 a~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~----~~----~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ++++|+++++.|+++ ||+||+|+||+++|++......    ..    .+....+..++.+|+|+|+++
T Consensus       153 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v  221 (246)
T 2ag5_A          153 AVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLC  221 (246)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence            999999999999988 9999999999999998654211    01    122233556788999999865

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=100.00  E-value=6.5e-40  Score=265.38  Aligned_cols=218  Identities=26%  Similarity=0.351  Sum_probs=186.0

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhc-CCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      .+++++|+++||||++|||++++++|+++|++|++++|+.++.+...+++.+. +.++.++.+|++++++++++++++.+
T Consensus         9 ~~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   88 (265)
T 1h5q_A            9 TISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDA   88 (265)
T ss_dssp             EECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CcccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999887766666665432 56788999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc---CCEEEEEeccCCcCCCCC------
Q 027248           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSS------  156 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~---~~~iv~~sS~~~~~~~~~------  156 (226)
                      .++++|+||||||... ..++.+.+.++|++++++|+.++++++++++|.|.+   .++||++||..+..+.+.      
T Consensus        89 ~~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~  167 (265)
T 1h5q_A           89 DLGPISGLIANAGVSV-VKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSL  167 (265)
T ss_dssp             HSCSEEEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEEC
T ss_pred             hcCCCCEEEECCCcCC-CCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccccccccc
Confidence            9999999999999876 567788899999999999999999999999999853   379999999987765432      


Q ss_pred             -CchhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC--chhhhhhccCCCCCchhhhccc
Q 027248          157 -MAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN--DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       157 -~~~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~p~~~a~av  225 (226)
                       ...|++||+++++|++.++.|+.+ ||++++|+||+++|++.......  ..+....+..++..|+|+|+++
T Consensus       168 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  240 (265)
T 1h5q_A          168 TQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNIPLNRFAQPEEMTGQA  240 (265)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHTCTTSSCBCGGGGHHHH
T ss_pred             cccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccchhHHHHHHhcCcccCCCCHHHHHHHH
Confidence             778999999999999999999988 99999999999999987664211  1122334556788999999864

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=100.00  E-value=8.8e-40  Score=263.18  Aligned_cols=216  Identities=27%  Similarity=0.420  Sum_probs=189.0

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      .+++||+++||||++|||++++++|+++|++|++++|++++++...+++...+.++.++.+|++++++++++++++.+.+
T Consensus         7 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   86 (255)
T 1fmc_A            7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKL   86 (255)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            45789999999999999999999999999999999999988888888887777788899999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHH
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKT  165 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKa  165 (226)
                      +++|+||||||... ..++ +.+.++|++.+++|+.++++++++++|.|++  .++||++||..+..+.++...|++||+
T Consensus        87 ~~~d~vi~~Ag~~~-~~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  164 (255)
T 1fmc_A           87 GKVDILVNNAGGGG-PKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKA  164 (255)
T ss_dssp             SSCCEEEECCCCCC-CCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHH
T ss_pred             CCCCEEEECCCCCC-CCCC-CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCCcccHHHHH
Confidence            99999999999875 3444 6789999999999999999999999999854  479999999999888899999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCc---hhhhhhccCCCCCchhhhccc
Q 027248          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND---GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       166 a~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +++.+++.++.|+.+ +|++++++||++.|++.+....+.   ......+..++..|+|+|+++
T Consensus       165 a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  228 (255)
T 1fmc_A          165 AASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAA  228 (255)
T ss_dssp             HHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSSCSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccChHHHHHHHhcCCcccCCCHHHHHHHH
Confidence            999999999999987 999999999999999865532221   122233455688999999865

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=100.00  E-value=1.2e-39  Score=268.88  Aligned_cols=218  Identities=22%  Similarity=0.346  Sum_probs=187.8

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhc-CCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      ..+++||+++||||++|||++++++|+++|++|++++|+.++++...+++.+. +.++.++.+|++++++++++++++.+
T Consensus        21 ~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~  100 (302)
T 1w6u_A           21 PNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIK  100 (302)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999998888887777665 66789999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhh-c--CCEEEEEeccCCcCCCCCCchhhH
Q 027248           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ-K--GSSVVLISSIAGYQPQSSMAMYGV  162 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~-~--~~~iv~~sS~~~~~~~~~~~~Y~~  162 (226)
                      .++++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|. +  .++||++||..+..+.++...|++
T Consensus       101 ~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  179 (302)
T 1w6u_A          101 VAGHPNIVINNAAGNF-ISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSAS  179 (302)
T ss_dssp             HTCSCSEEEECCCCCC-CSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHH
T ss_pred             HcCCCCEEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCCCcchhHH
Confidence            9999999999999865 56778889999999999999999999999999985 2  479999999998888899999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCC-cccccccCc----hhhhhhccCCCCCchhhhccc
Q 027248          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTH-FAEYITSND----GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       163 sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~-~~~~~~~~~----~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ||+++++|++.++.|+.+ ||++++|+||+++|+ +........    .+....+..++..|+|+|+++
T Consensus       180 sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~  248 (302)
T 1w6u_A          180 AKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLA  248 (302)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCCcCCCCCHHHHHHHH
Confidence            999999999999999988 999999999999998 544432221    222334455688999999875

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=100.00  E-value=1.6e-39  Score=265.39  Aligned_cols=217  Identities=25%  Similarity=0.348  Sum_probs=186.3

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      ++++||+++||||++|||++++++|+++|++|++++|+.++.+...+++...+.++.++.+|++++++++++++++.+.+
T Consensus        30 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~  109 (279)
T 3ctm_A           30 FSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDF  109 (279)
T ss_dssp             GCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHh
Confidence            35789999999999999999999999999999999999988877777776667788899999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCccc-cccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCC--CCCCchhhH
Q 027248           88 GKIDVVVSNAAANPSVDSIL-QTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQP--QSSMAMYGV  162 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~-~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~--~~~~~~Y~~  162 (226)
                      +++|+||||||......++. +.+.++|++++++|+.+++++++.++|.|++  .++||++||..+..+  .++...|++
T Consensus       110 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~  189 (279)
T 3ctm_A          110 GTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPYNT  189 (279)
T ss_dssp             SCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC---CCHHHHHH
T ss_pred             CCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCCCCCcccHHH
Confidence            99999999999875325566 7889999999999999999999999999854  589999999998877  778899999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC--chhhhhhccCCCCCchhhhccc
Q 027248          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN--DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       163 sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ||++++.++++++.|+++ + +||+|+||+++|++.......  ..+....+..++..|+|+|+++
T Consensus       190 sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~  254 (279)
T 3ctm_A          190 AKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFASKDMKAKWWQLTPLGREGLTQELVGGY  254 (279)
T ss_dssp             HHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSCCHHHHHHHHHHSTTCSCBCGGGTHHHH
T ss_pred             HHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccccccChHHHHHHHHhCCccCCcCHHHHHHHH
Confidence            999999999999999988 9 999999999999987532111  1122334556788999999865

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1e-40  Score=266.40  Aligned_cols=198  Identities=23%  Similarity=0.216  Sum_probs=174.8

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh--C
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF--G   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--~   88 (226)
                      ++|+++||||++|||++++++|+++|++|++++|++++.+          ....++.+|++++++++++++++.+.+  +
T Consensus         2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g   71 (236)
T 1ooe_A            2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA----------DSNILVDGNKNWTEQEQSILEQTASSLQGS   71 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS----------SEEEECCTTSCHHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc----------cccEEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence            5799999999999999999999999999999999987642          135677899999999999999999999  7


Q ss_pred             CCCEEEEcCCCCCCCCcc-ccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHhHHHH
Q 027248           89 KIDVVVSNAAANPSVDSI-LQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~-~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~  167 (226)
                      ++|+||||||+.. ..++ .+.+.++|++++++|+.++++++++++|.|+++++||++||..+..+.++...|++||+++
T Consensus        72 ~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~  150 (236)
T 1ooe_A           72 QVDGVFCVAGGWA-GGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAAV  150 (236)
T ss_dssp             CEEEEEECCCCCC-CBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHH
T ss_pred             CCCEEEECCcccC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccCCCCcHHHHHHHHHH
Confidence            9999999999875 4555 6788999999999999999999999999997778999999999999999999999999999


Q ss_pred             HHHHHHHHHHhC--C-CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          168 LGLTKALAAEMA--P-DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       168 ~~~~~~la~e~~--~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ++|+++|+.|+.  + ||+||+|+||+++|++.........      ..+..+|+|+|+++
T Consensus       151 ~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~------~~~~~~~~dvA~~i  205 (236)
T 1ooe_A          151 HHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPNAD------HSSWTPLSFISEHL  205 (236)
T ss_dssp             HHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTTCC------GGGCBCHHHHHHHH
T ss_pred             HHHHHHHHHHhcccCCCeEEEEEecCcccCcchhhcCCCcc------ccccCCHHHHHHHH
Confidence            999999999997  7 9999999999999998765432221      13467899998764

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=4.4e-39  Score=265.70  Aligned_cols=220  Identities=27%  Similarity=0.423  Sum_probs=188.9

Q ss_pred             cccccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHh-----cCCcEEEEEeeCCCHHHHHH
Q 027248            4 MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA-----RGIEVIGVVCHVSNGQQRKN   78 (226)
Q Consensus         4 ~~~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~Dv~~~~~v~~   78 (226)
                      +.+...++||+++||||++|||++++++|+++|++|++++|+.++++...+++..     .+.++.++.+|++++++++.
T Consensus        10 ~~~~~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~   89 (303)
T 1yxm_A           10 YLAPGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNN   89 (303)
T ss_dssp             SBCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHH
T ss_pred             ccCcCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHH
Confidence            3445578899999999999999999999999999999999999888888888765     35678999999999999999


Q ss_pred             HHHHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhh-hc-CCEEEEEeccCCcCCCCC
Q 027248           79 LINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHL-QK-GSSVVLISSIAGYQPQSS  156 (226)
Q Consensus        79 ~~~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l-~~-~~~iv~~sS~~~~~~~~~  156 (226)
                      +++++.+.++++|+||||||... ..++.+.+.++|++++++|+.|+++++++++|.+ ++ .++||++||.. ..+.++
T Consensus        90 ~~~~~~~~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~~~~~  167 (303)
T 1yxm_A           90 LVKSTLDTFGKINFLVNNGGGQF-LSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KAGFPL  167 (303)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TTCCTT
T ss_pred             HHHHHHHHcCCCCEEEECCCCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-ccCCCc
Confidence            99999999999999999999765 5677888999999999999999999999999954 33 68999999998 777888


Q ss_pred             CchhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcc-ccccc--C---chhhhhhccCCCCCchhhhccc
Q 027248          157 MAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFA-EYITS--N---DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       157 ~~~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~-~~~~~--~---~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ...|+++|+++.+++++++.|+.+ ||++++|+||+++|++. .....  .   .......+..++..|+|+|+++
T Consensus       168 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~i  243 (303)
T 1yxm_A          168 AVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVV  243 (303)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHHHHH
T ss_pred             chhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhcCcccCCCCHHHHHHHH
Confidence            999999999999999999999988 99999999999999953 11111  1   1122334456788999999875

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=100.00  E-value=1.6e-40  Score=267.73  Aligned_cols=200  Identities=19%  Similarity=0.162  Sum_probs=176.2

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      .++.+|+++||||++|||++++++|+++|++|++++|++++.+            ...+.+|+++.++++++++++.+.+
T Consensus        18 ~~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~------------~~~~~~d~~d~~~v~~~~~~~~~~~   85 (251)
T 3orf_A           18 GSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA------------DHSFTIKDSGEEEIKSVIEKINSKS   85 (251)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS------------SEEEECSCSSHHHHHHHHHHHHTTT
T ss_pred             ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc------------ccceEEEeCCHHHHHHHHHHHHHHc
Confidence            3455899999999999999999999999999999999987542            1357889999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHhHHHH
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~  167 (226)
                      +++|+||||||+......+.+.+.++|++++++|+.|+++++++++|.|+++++||++||..+..+.++...|++||+|+
T Consensus        86 g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~  165 (251)
T 3orf_A           86 IKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRTSGMIAYGATKAAT  165 (251)
T ss_dssp             CCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHH
T ss_pred             CCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCCCCCchhHHHHHHH
Confidence            99999999999876444477888999999999999999999999999998888999999999999999999999999999


Q ss_pred             HHHHHHHHHHhC--C-CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          168 LGLTKALAAEMA--P-DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       168 ~~~~~~la~e~~--~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ++|+++++.|++  + +|+||+|+||+++|++.+......      +..++.+|+|+|+++
T Consensus       166 ~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~------~~~~~~~~~dva~~i  220 (251)
T 3orf_A          166 HHIIKDLASENGGLPAGSTSLGILPVTLDTPTNRKYMSDA------NFDDWTPLSEVAEKL  220 (251)
T ss_dssp             HHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHHHHHCTTS------CGGGSBCHHHHHHHH
T ss_pred             HHHHHHHHHHhcccCCCcEEEEEecCcCcCcchhhhcccc------cccccCCHHHHHHHH
Confidence            999999999986  6 999999999999999977654433      234678899999875

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=100.00  E-value=9.5e-41  Score=283.31  Aligned_cols=215  Identities=15%  Similarity=0.102  Sum_probs=180.0

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHh-CCCeEEEEecCcchHH------------HHHHHHHhcCCcEEEEEeeCCCHHHHH
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGL-EGASVVVSSRKQKNVD------------EAVVKLKARGIEVIGVVCHVSNGQQRK   77 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~-~g~~v~~~~r~~~~~~------------~~~~~~~~~~~~~~~~~~Dv~~~~~v~   77 (226)
                      .||++|||||++|||+++++.|++ .|++|++++|+.+..+            ...+++.+.+.++..+.+|++++++++
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~  139 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARA  139 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence            489999999999999999999999 9999999999876543            233556667888999999999999999


Q ss_pred             HHHHHHHHHh-CCCCEEEEcCCCC------------CCCCcc---------------------ccccHHHHHHHHHHHHH
Q 027248           78 NLINQTIEKF-GKIDVVVSNAAAN------------PSVDSI---------------------LQTKESVLDKLWDINVK  123 (226)
Q Consensus        78 ~~~~~~~~~~-~~id~li~nag~~------------~~~~~~---------------------~~~~~~~~~~~~~~N~~  123 (226)
                      ++++++.+.+ |++|+||||||..            ...+++                     .+.+.++|++++++|..
T Consensus       140 ~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~  219 (422)
T 3s8m_A          140 QVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGG  219 (422)
T ss_dssp             HHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhch
Confidence            9999999999 9999999999972            112333                     36789999999999999


Q ss_pred             HHH-HHHHHHhh-hh-hcCCEEEEEeccCCcCCCCCC--chhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcc
Q 027248          124 SSI-LLLQDAAP-HL-QKGSSVVLISSIAGYQPQSSM--AMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFA  197 (226)
Q Consensus       124 ~~~-~~~~~~~~-~l-~~~~~iv~~sS~~~~~~~~~~--~~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~  197 (226)
                      +.+ .+++++.+ .| +++|+||++||..+..+.|++  ++|++||+|+.+|+|+|+.|+++ |||||+|+||+++|++.
T Consensus       220 ~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~~~  299 (422)
T 3s8m_A          220 QDWELWIDALEGAGVLADGARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQAS  299 (422)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTG
T ss_pred             hHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccCCCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcChhh
Confidence            887 77888765 34 346899999999998887766  99999999999999999999998 99999999999999998


Q ss_pred             cccccCchhhh--hhccCCCCCchhhhccc
Q 027248          198 EYITSNDGVVS--SVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       198 ~~~~~~~~~~~--~~~~~~~~~p~~~a~av  225 (226)
                      ..+.....+..  ..+-.+...||++|+++
T Consensus       300 ~~ip~~~~~~~~~~~~m~r~G~pEdva~~v  329 (422)
T 3s8m_A          300 AAIPVMPLYISMVYKIMKEKGLHEGTIEQL  329 (422)
T ss_dssp             GGSTHHHHHHHHHHHHHHHTTCCCCHHHHH
T ss_pred             hcCCCChHHHHHHHhhhcCCcChHHHHHHH
Confidence            77643332221  12456788999999865

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=100.00  E-value=1.1e-40  Score=267.66  Aligned_cols=204  Identities=23%  Similarity=0.281  Sum_probs=175.2

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEE-e--cCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVS-S--RKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~-~--r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      ||+++||||++|||++++++|+++|++|+++ +  |++++++...+++  .+       .|+.++++++++++++.+.++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~--~~-------~~~~~~~~v~~~~~~~~~~~g   71 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN--PG-------TIALAEQKPERLVDATLQHGE   71 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS--TT-------EEECCCCCGGGHHHHHGGGSS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh--CC-------CcccCHHHHHHHHHHHHHHcC
Confidence            5899999999999999999999999999999 6  9988777766655  12       244588888899999999999


Q ss_pred             CCCEEEEcCCCCCCC---CccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHh
Q 027248           89 KIDVVVSNAAANPSV---DSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVT  163 (226)
Q Consensus        89 ~id~li~nag~~~~~---~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~s  163 (226)
                      ++|+||||||+.. .   .++.+.+.++|++++++|+.++++++++++|+|++  .++||++||..+..+.++...|++|
T Consensus        72 ~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~as  150 (244)
T 1zmo_A           72 AIDTIVSNDYIPR-PMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPA  150 (244)
T ss_dssp             CEEEEEECCCCCT-TGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTCTTHHHH
T ss_pred             CCCEEEECCCcCC-CCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCCCchHHHHH
Confidence            9999999999875 4   67888999999999999999999999999999954  4799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcc---cccccCc---hhhh-hhccCCCCCchhhhccc
Q 027248          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFA---EYITSND---GVVS-SVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       164 Kaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~---~~~~~~~---~~~~-~~~~~~~~~p~~~a~av  225 (226)
                      |+++++|+++|+.|+++ ||+||+|+||+++|++.   +....+.   .+.. ..+..++.+|+|+|+++
T Consensus       151 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe~vA~~v  220 (244)
T 1zmo_A          151 RAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENNPELRERVDRDVPLGRLGRPDEMGALI  220 (244)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHHCHHHHHHHHHHCTTCSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccchHHHHHHHhcCCCCCCCcCHHHHHHHH
Confidence            99999999999999988 99999999999999997   5432221   1222 34556789999999875

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=5.1e-40  Score=266.88  Aligned_cols=207  Identities=28%  Similarity=0.449  Sum_probs=176.6

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      ++||+++||||++|||++++++|+++|++|++++|+.++.+...+++.+.  +.++.++.+|++++++++++++++.+++
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   84 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999999999999988877777776543  3468889999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc-----CCEEEEEeccCCcCCCCCCchhhH
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-----GSSVVLISSIAGYQPQSSMAMYGV  162 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~-----~~~iv~~sS~~~~~~~~~~~~Y~~  162 (226)
                      +++|+||||||...         .++|++++++|+.+++.+++.++|.|++     .++||++||..+..+.++...|++
T Consensus        85 g~id~lv~~Ag~~~---------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  155 (267)
T 2gdz_A           85 GRLDILVNNAGVNN---------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCA  155 (267)
T ss_dssp             SCCCEEEECCCCCC---------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             CCCCEEEECCCCCC---------hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCCCchHHH
Confidence            99999999999752         3568999999999999999999999954     479999999999988899999999


Q ss_pred             hHHHHHHHHHHH--HHHhCC-CeEEEEEecCceeCCcccccccCch----------hhhhhccCCCCCchhhhccc
Q 027248          163 TKTALLGLTKAL--AAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG----------VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       163 sKaa~~~~~~~l--a~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~----------~~~~~~~~~~~~p~~~a~av  225 (226)
                      ||++++++++++  +.|+.+ ||+||+|+||+++|++.........          .........+.+|+|+|+++
T Consensus       156 sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v  231 (267)
T 2gdz_A          156 SKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGL  231 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccccccccchhhhHHHHHHHHhccccCCCHHHHHHHH
Confidence            999999999995  688877 9999999999999998655422111          01122334578999999875

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=7.7e-40  Score=292.62  Aligned_cols=205  Identities=26%  Similarity=0.333  Sum_probs=174.0

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      .+++||+++||||++|||++++++|+++|++|++.+|+  .+++..+++.+.+.++..+.+|++  ++.+++++++.+++
T Consensus       318 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~--~~~~~~~~i~~~g~~~~~~~~Dv~--~~~~~~~~~~~~~~  393 (604)
T 2et6_A          318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFK--DATKTVDEIKAAGGEAWPDQHDVA--KDSEAIIKNVIDKY  393 (604)
T ss_dssp             CCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSS--CCHHHHHHHHHTTCEEEEECCCHH--HHHHHHHHHHHHHH
T ss_pred             cccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCc--cHHHHHHHHHhcCCeEEEEEcChH--HHHHHHHHHHHHhc
Confidence            46889999999999999999999999999999999874  345666777766777777788884  55678899999999


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHH
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKT  165 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKa  165 (226)
                      |++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++  +|+||++||.++..+.++...|++||+
T Consensus       394 G~iDiLVnNAGi~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~~~~~Y~asKa  472 (604)
T 2et6_A          394 GTIDILVNNAGILR-DRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKA  472 (604)
T ss_dssp             SCCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTBHHHHHHHH
T ss_pred             CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCChhHHHHHH
Confidence            99999999999876 578889999999999999999999999999999954  489999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       166 a~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      |+.+|+++|+.|+++ ||+||+|+||+ +|+|........       .....+|+|+|.++
T Consensus       473 al~~lt~~la~El~~~gIrVn~v~PG~-~T~m~~~~~~~~-------~~~~~~pe~vA~~v  525 (604)
T 2et6_A          473 GILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTLSIMREQ-------DKNLYHADQVAPLL  525 (604)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC----------------CCSSCGGGTHHHH
T ss_pred             HHHHHHHHHHHHhCccCeEEEEEcCCC-CCccccccCchh-------hccCCCHHHHHHHH
Confidence            999999999999998 99999999996 999876532221       12345899998764

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=3.6e-40  Score=294.71  Aligned_cols=206  Identities=26%  Similarity=0.334  Sum_probs=178.0

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCc---------chHHHHHHHHHhcCCcEEEEEeeCCCHHHHHH
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ---------KNVDEAVVKLKARGIEVIGVVCHVSNGQQRKN   78 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~---------~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   78 (226)
                      .+++||+++||||++|||++++++|+++|++|++.+|+.         +.++...+++.+.+.+.   .+|+++.+++++
T Consensus         4 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~---~~d~~d~~~~~~   80 (604)
T 2et6_A            4 VDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVA---VADYNNVLDGDK   80 (604)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEE---EEECCCTTCHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeE---EEEcCCHHHHHH
Confidence            457899999999999999999999999999999998765         66777778887666554   369999888999


Q ss_pred             HHHHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCC
Q 027248           79 LINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSS  156 (226)
Q Consensus        79 ~~~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~  156 (226)
                      +++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|+|+++++++|+|++  .|+||++||.++..+.++
T Consensus        81 ~v~~~~~~~G~iDiLVnNAGi~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~~  159 (604)
T 2et6_A           81 IVETAVKNFGTVHVIINNAGILR-DASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFG  159 (604)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT
T ss_pred             HHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCC
Confidence            99999999999999999999875 578889999999999999999999999999999954  589999999999999999


Q ss_pred             CchhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          157 MAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       157 ~~~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ...|++||+|+.+|+++|+.|+++ ||+||+|+|| ++|+|......+ ..      ....+|+++|.++
T Consensus       160 ~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~m~~~~~~~-~~------~~~~~pe~vA~~v  221 (604)
T 2et6_A          160 QANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSRMTESIMPP-PM------LEKLGPEKVAPLV  221 (604)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCHHHHTTSCH-HH------HTTCSHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCccccccCCh-hh------hccCCHHHHHHHH
Confidence            999999999999999999999998 9999999998 699886543221 11      1235899998764

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=100.00  E-value=1.8e-39  Score=260.04  Aligned_cols=209  Identities=26%  Similarity=0.364  Sum_probs=178.4

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      ++++||+++||||++|||++++++|+++|++|++++|++++++...+++.    ...++.+|++++++++++++    .+
T Consensus         3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~----~~   74 (244)
T 3d3w_A            3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP----GIEPVCVDLGDWEATERALG----SV   74 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHT----TC
T ss_pred             cccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC----CCCEEEEeCCCHHHHHHHHH----Hc
Confidence            46789999999999999999999999999999999999877766554432    34567899999999888776    56


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc---CCEEEEEeccCCcCCCCCCchhhHhH
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTK  164 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~---~~~iv~~sS~~~~~~~~~~~~Y~~sK  164 (226)
                      +++|+||||||... ..++.+.+.++|++++++|+.+++++++++.|.|++   .++||++||..+..+.++...|++||
T Consensus        75 ~~id~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  153 (244)
T 3d3w_A           75 GPVDLLVNNAAVAL-LQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTK  153 (244)
T ss_dssp             CCCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             CCCCEEEECCccCC-CcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCCCCchHHHHH
Confidence            89999999999875 567788899999999999999999999999999853   47999999999998889999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch----hhhhhccCCCCCchhhhccc
Q 027248          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG----VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       165 aa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~----~~~~~~~~~~~~p~~~a~av  225 (226)
                      ++++.+++.++.|+++ +|++++|+||+++|++.+.......    +....+..++.+|+|+|+++
T Consensus       154 ~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  219 (244)
T 3d3w_A          154 GALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAI  219 (244)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHHHTCTTCSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHHHHHHHhhCCCCCCcCHHHHHHHH
Confidence            9999999999999987 9999999999999998764432222    22333556788999999865

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=100.00  E-value=9e-39  Score=260.48  Aligned_cols=217  Identities=29%  Similarity=0.390  Sum_probs=185.8

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+..+...+++.. ..++.++.+|++++++++++++++.+++
T Consensus        12 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   90 (278)
T 2bgk_A           12 NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS-PDVISFVHCDVTKDEDVRNLVDTTIAKH   90 (278)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCC-CCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            457899999999999999999999999999999999998777666666532 2368899999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCC-CCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCC-CCchhhHh
Q 027248           88 GKIDVVVSNAAANPS-VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQS-SMAMYGVT  163 (226)
Q Consensus        88 ~~id~li~nag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~-~~~~Y~~s  163 (226)
                      +++|+||||||.... ..++.+.+.++|++++++|+.++++++++++|.|++  .++||++||..+..+.+ +...|++|
T Consensus        91 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~~s  170 (278)
T 2bgk_A           91 GKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTAT  170 (278)
T ss_dssp             SCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHHHH
T ss_pred             CCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCCCCCcchHHH
Confidence            999999999998642 356778899999999999999999999999999864  57999999999988877 78899999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC-chhh----hh--hccCCCCCchhhhccc
Q 027248          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN-DGVV----SS--VSSLKLSPPSSLTLAV  225 (226)
Q Consensus       164 Kaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~-~~~~----~~--~~~~~~~~p~~~a~av  225 (226)
                      |++++++++.++.|+.+ ||++++|+||++.|++....... ....    ..  .+..++..|+|+|+++
T Consensus       171 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  240 (278)
T 2bgk_A          171 KHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAV  240 (278)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhcccccccccCCHHHHHHHH
Confidence            99999999999999988 99999999999999987655332 1111    11  1235688999999865

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=100.00  E-value=4.6e-39  Score=263.73  Aligned_cols=210  Identities=23%  Similarity=0.333  Sum_probs=182.6

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCC-cEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI-EVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      .+++||+++||||++|||++++++|+++|++|++++|++++++...+++.+.+. ++.++.+|++++++++++++++.+.
T Consensus        24 ~~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~  103 (286)
T 1xu9_A           24 EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKL  103 (286)
T ss_dssp             GGGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             hhcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999999988888877766554 6889999999999999999999999


Q ss_pred             hCCCCEEEEc-CCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc-CCEEEEEeccCCcCCCCCCchhhHhH
Q 027248           87 FGKIDVVVSN-AAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-GSSVVLISSIAGYQPQSSMAMYGVTK  164 (226)
Q Consensus        87 ~~~id~li~n-ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK  164 (226)
                      ++++|+|||| +|...  ..+.+.+.++|++++++|+.|+++++++++|.|++ .++||++||..+..+.++...|++||
T Consensus       104 ~g~iD~li~naag~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  181 (286)
T 1xu9_A          104 MGGLDMLILNHITNTS--LNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASK  181 (286)
T ss_dssp             HTSCSEEEECCCCCCC--CCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCTTCHHHHHHH
T ss_pred             cCCCCEEEECCccCCC--CccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccCCCCccHHHHHH
Confidence            9999999999 56543  34556789999999999999999999999999854 68999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHh--CC-CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          165 TALLGLTKALAAEM--AP-DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       165 aa~~~~~~~la~e~--~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +++++++++++.|+  .. +|++++|+||+++|++........      ......+|+++|+++
T Consensus       182 ~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~------~~~~~~~~~~vA~~i  239 (286)
T 1xu9_A          182 FALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGI------VHMQAAPKEECALEI  239 (286)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCGG------GGGGCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHHHhcccc------ccCCCCCHHHHHHHH
Confidence            99999999999998  45 999999999999999875432111      123467899998764

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=100.00  E-value=1.4e-39  Score=262.46  Aligned_cols=206  Identities=18%  Similarity=0.275  Sum_probs=172.1

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCe-EEEEecCcchHHHHHHHHHhc--CCcEEEEEeeCCCH-HHHHHHHHHHH
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNG-QQRKNLINQTI   84 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~-~~v~~~~~~~~   84 (226)
                      +++||+++||||++|||++++++|+++|++ |++++|+++.  ...+++.+.  +.++.++.+|++++ ++++++++++.
T Consensus         2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~--~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (254)
T 1sby_A            2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP--TALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIF   79 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH--HHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH--HHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHH
Confidence            467999999999999999999999999997 9999998743  222333332  44688999999998 99999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc-----CCEEEEEeccCCcCCCCCCch
Q 027248           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-----GSSVVLISSIAGYQPQSSMAM  159 (226)
Q Consensus        85 ~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~-----~~~iv~~sS~~~~~~~~~~~~  159 (226)
                      +.++++|+||||||+.         +.++|++++++|+.++++++++++|.|.+     .++||++||..+..+.++...
T Consensus        80 ~~~g~id~lv~~Ag~~---------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  150 (254)
T 1sby_A           80 DQLKTVDILINGAGIL---------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPV  150 (254)
T ss_dssp             HHHSCCCEEEECCCCC---------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHH
T ss_pred             HhcCCCCEEEECCccC---------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCCchH
Confidence            9999999999999974         24678999999999999999999999854     478999999999999999999


Q ss_pred             hhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCccccccc----CchhhhhhccCCCCCchhhhccc
Q 027248          160 YGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS----NDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       160 Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~----~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      |++||+++++|+++|+.|+.+ ||+|++|+||+++|++.+....    ............+.+|+|+|+++
T Consensus       151 Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~i  221 (254)
T 1sby_A          151 YSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNF  221 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCCEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHHhcCCCCCHHHHHHHH
Confidence            999999999999999999986 9999999999999998765321    11122222334556899998864

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=100.00  E-value=4.5e-39  Score=256.27  Aligned_cols=201  Identities=25%  Similarity=0.353  Sum_probs=169.2

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      .+|+++||||++|||++++++|+++|++|++++|++++++...+++.    ++.++.+|++++++++++++++.+.++++
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELE----GALPLPGDVREEGDWARAVAAMEEAFGEL   79 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh----hceEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999999999999877766655442    57788999999999999999999999999


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHHHH
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALL  168 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~  168 (226)
                      |+||||||... ..++.+.+.++|++++++|+.+++++++.++|.|++  .++||++||..+..+.++...|++||++++
T Consensus        80 d~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~  158 (234)
T 2ehd_A           80 SALVNNAGVGV-MKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLL  158 (234)
T ss_dssp             CEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCCTTCHHHHHHHHHHH
T ss_pred             CEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCCCCCchhhHHHHHHH
Confidence            99999999875 567888999999999999999999999999999965  479999999999988899999999999999


Q ss_pred             HHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          169 GLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       169 ~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      .+++.++.|+.+ ||++++|+||+++|++.....  ..+       ...+|+|+|+++
T Consensus       159 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~~-------~~~~~~dvA~~~  207 (234)
T 2ehd_A          159 GLAGAAMLDLREANVRVVNVLPGSVDTGFAGNTP--GQA-------WKLKPEDVAQAV  207 (234)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEECC-------------------------CCHHHHHHHH
T ss_pred             HHHHHHHHHHhhcCcEEEEEEeCCCcCCcccccc--ccc-------CCCCHHHHHHHH
Confidence            999999999988 999999999999999865421  111       147899999864

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=100.00  E-value=1.9e-39  Score=263.78  Aligned_cols=217  Identities=29%  Similarity=0.474  Sum_probs=189.2

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEec-CcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSR-KQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      +++++|+++||||++|||++++++|+++|++|++++| ++++++...+++...+.++.++.+|++++++++++++++.+.
T Consensus        17 ~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (274)
T 1ja9_A           17 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH   96 (274)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999 777777777777777778889999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCc-CCCCCCchhhHhHH
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY-QPQSSMAMYGVTKT  165 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~-~~~~~~~~Y~~sKa  165 (226)
                      ++++|+||||||... ..++.+.+.++|++++++|+.++++++++++|.|+++++||++||..+. .+.++...|++||+
T Consensus        97 ~~~~d~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~  175 (274)
T 1ja9_A           97 FGGLDFVMSNSGMEV-WCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPNHALYAGSKA  175 (274)
T ss_dssp             HSCEEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCCSCHHHHHHHH
T ss_pred             cCCCCEEEECCCCCC-CcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHhccCCCCCCchHHHHHH
Confidence            999999999999875 5677888999999999999999999999999998756899999999988 77888999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCceeCCccccccc----------C-chh----hhhhccCCCCCchhhhccc
Q 027248          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS----------N-DGV----VSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       166 a~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~----------~-~~~----~~~~~~~~~~~p~~~a~av  225 (226)
                      +++.+++.++.|+.+ +|++++++||+++|++......          . ...    ....+..++..|+|+|+++
T Consensus       176 a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i  251 (274)
T 1ja9_A          176 AVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAV  251 (274)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcCCCCCccCHHHHHHHH
Confidence            999999999999987 9999999999999998762110          1 111    1223445688999999865

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=100.00  E-value=2.1e-40  Score=275.78  Aligned_cols=220  Identities=22%  Similarity=0.270  Sum_probs=145.8

Q ss_pred             cccccCCCEEEEEcC--CCchhHHHHHHHHhCCCeEEEEecCc-----------chHH-----------HHHHHHHhcCC
Q 027248            6 MAKRFQGKVAIVTAS--TQGIGFGIAERLGLEGASVVVSSRKQ-----------KNVD-----------EAVVKLKARGI   61 (226)
Q Consensus         6 ~~~~~~gk~vlItGa--~~giG~a~~~~l~~~g~~v~~~~r~~-----------~~~~-----------~~~~~~~~~~~   61 (226)
                      |.++++||++|||||  ++|||++++++|+++|++|++++|++           ++++           +..+++.+.+.
T Consensus         3 ~~~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (319)
T 2ptg_A            3 LPVDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPV   82 (319)
T ss_dssp             CCCCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC------------------------------
T ss_pred             cccccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccc
Confidence            445678999999999  89999999999999999999998752           2222           12223322221


Q ss_pred             c---EEEEEee------------CCC--------HHHHHHHHHHHHHHhCCCCEEEEcCCCCC-CCCccccccHHHHHHH
Q 027248           62 E---VIGVVCH------------VSN--------GQQRKNLINQTIEKFGKIDVVVSNAAANP-SVDSILQTKESVLDKL  117 (226)
Q Consensus        62 ~---~~~~~~D------------v~~--------~~~v~~~~~~~~~~~~~id~li~nag~~~-~~~~~~~~~~~~~~~~  117 (226)
                      .   ...+.+|            +++        +++++.+++++.+++|++|+||||||+.. ...++.+.+.++|+++
T Consensus        83 ~~~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~  162 (319)
T 2ptg_A           83 DLVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAA  162 (319)
T ss_dssp             --CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHH
T ss_pred             cccccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHH
Confidence            1   2334443            333        45889999999999999999999999753 2467888999999999


Q ss_pred             HHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCC-chhhHhHHHHHHHHHHHHHHhC-C-CeEEEEEecCceeC
Q 027248          118 WDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSM-AMYGVTKTALLGLTKALAAEMA-P-DTRVNCVAPGFVPT  194 (226)
Q Consensus       118 ~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~-~~Y~~sKaa~~~~~~~la~e~~-~-~i~v~~v~Pg~v~t  194 (226)
                      +++|+.|+++++++++|+|+++++||++||..+..+.++. ..|++||+|+++|+++|+.|++ + ||+||+|+||+++|
T Consensus       163 ~~vN~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T  242 (319)
T 2ptg_A          163 VSSSSYSFVSLLQHFLPLMKEGGSALALSYIASEKVIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKS  242 (319)
T ss_dssp             HHHHTHHHHHHHHHHGGGEEEEEEEEEEEECC------------------THHHHHHHHHHHHHHHCCEEEEEEECCCC-
T ss_pred             HhHhhHHHHHHHHHHHHHHhcCceEEEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCccC
Confidence            9999999999999999999777899999999998888887 6899999999999999999997 3 99999999999999


Q ss_pred             CcccccccC--ch--------hhhhhccCCCCCchhhhccc
Q 027248          195 HFAEYITSN--DG--------VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       195 ~~~~~~~~~--~~--------~~~~~~~~~~~~p~~~a~av  225 (226)
                      +|.+.....  ..        +....+..++.+|+|+|+++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v  283 (319)
T 2ptg_A          243 RAASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGRAA  283 (319)
T ss_dssp             ------------------------------CCCHHHHHHHH
T ss_pred             hhhhhcccccchhhHHHHHHHHhccCCCCCCCCHHHHHHHH
Confidence            987654311  00        11234556788999999865

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=100.00  E-value=1.1e-39  Score=263.09  Aligned_cols=207  Identities=21%  Similarity=0.269  Sum_probs=176.5

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCE
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~   92 (226)
                      |+++||||++|||++++++|+++|++|++++|++++++...+ +...+.++..+     ++++++++++++.+.++++|+
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~~~~~~~~-----d~~~v~~~~~~~~~~~g~iD~   75 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAETYPQLKPM-----SEQEPAELIEAVTSAYGQVDV   75 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHHCTTSEEC-----CCCSHHHHHHHHHHHHSCCCE
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhcCCcEEEE-----CHHHHHHHHHHHHHHhCCCCE
Confidence            789999999999999999999999999999999988877655 65555555443     777888999999999999999


Q ss_pred             EEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHHHHHH
Q 027248           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLGL  170 (226)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~  170 (226)
                      ||||||+.....++.+.+.++|++++++|+.|+++++++++|+|++  .++||++||..+..+.++...|++||+++++|
T Consensus        76 lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~  155 (254)
T 1zmt_A           76 LVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTL  155 (254)
T ss_dssp             EEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHHH
T ss_pred             EEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCCCchHHHHHHHHHHHH
Confidence            9999998723577889999999999999999999999999999954  58999999999999999999999999999999


Q ss_pred             HHHHHHHhCC-CeEEEEEecCce---------eCCccccccc-CchhhhhhccCCCCCchhhhccc
Q 027248          171 TKALAAEMAP-DTRVNCVAPGFV---------PTHFAEYITS-NDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       171 ~~~la~e~~~-~i~v~~v~Pg~v---------~t~~~~~~~~-~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +++++.|+++ ||+||+|+||++         +|++...... ...+....+..++.+|+|+|+++
T Consensus       156 ~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v  221 (254)
T 1zmt_A          156 ANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELV  221 (254)
T ss_dssp             HHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHHHHHH
T ss_pred             HHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccChHHHHHHhccCCCCCCcCHHHHHHHH
Confidence            9999999988 999999999999         8877543110 01122334556788999999865

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=100.00  E-value=1.9e-39  Score=259.71  Aligned_cols=213  Identities=24%  Similarity=0.414  Sum_probs=185.7

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEE-ecCcchHHHHHHHHHhcCCcEEE-EEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIG-VVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~-~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      +|+++||||++|||++++++|+++|++|+++ +|++++.+...+++...+.++.. +.+|+++.++++++++++.+.+++
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG   80 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence            4889999999999999999999999999988 89988888887777776667766 899999999999999999999999


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHHH
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~  167 (226)
                      +|+||||||... ..++.+.+.++|++++++|+.++++++++++|.|++  .++||++||..+..+.++...|++||+++
T Consensus        81 ~d~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  159 (245)
T 2ph3_A           81 LDTLVNNAGITR-DTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAGL  159 (245)
T ss_dssp             CCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCSSBHHHHHHHHHH
T ss_pred             CCEEEECCCCCC-CCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCCCCcchHHHHHHH
Confidence            999999999875 567788899999999999999999999999999854  47999999998888888999999999999


Q ss_pred             HHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC--chhhhhhccCCCCCchhhhccc
Q 027248          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN--DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       168 ~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +++++.++.|+.+ ||++++++||+++|++.+.....  ..+....+..++..|+|+|+++
T Consensus       160 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  220 (245)
T 2ph3_A          160 IGFTRAVAKEYAQRGITVNAVAPGFIETEMTERLPQEVKEAYLKQIPAGRFGRPEEVAEAV  220 (245)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHHTCTTCSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            9999999999988 99999999999999987653211  1122233456678999999864

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=100.00  E-value=2.7e-39  Score=269.05  Aligned_cols=206  Identities=25%  Similarity=0.392  Sum_probs=177.5

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEE---------ecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHH
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVS---------SRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKN   78 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~---------~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   78 (226)
                      ++++||+++||||++|||++++++|+++|++|+++         +|+.++.+...+++...+..+   .+|+++.+++++
T Consensus         5 ~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~---~~D~~~~~~~~~   81 (319)
T 1gz6_A            5 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKA---VANYDSVEAGEK   81 (319)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEE---EEECCCGGGHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeE---EEeCCCHHHHHH
Confidence            46789999999999999999999999999999996         456777777778887665543   479999999999


Q ss_pred             HHHHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCC
Q 027248           79 LINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSS  156 (226)
Q Consensus        79 ~~~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~  156 (226)
                      +++++.+.++++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++  .++||++||..+..+.++
T Consensus        82 ~~~~~~~~~g~iD~lVnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~~  160 (319)
T 1gz6_A           82 LVKTALDTFGRIDVVVNNAGILR-DRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFG  160 (319)
T ss_dssp             HHHHHHHHTSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT
T ss_pred             HHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCC
Confidence            99999999999999999999876 467788999999999999999999999999999954  479999999988888889


Q ss_pred             CchhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          157 MAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       157 ~~~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ...|++||+|+++|++.|+.|+.+ ||+||+|+||++ |++.+..... ..      ....+|+++|.++
T Consensus       161 ~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~~~~~-~~------~~~~~p~dvA~~~  222 (319)
T 1gz6_A          161 QANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTETVMPE-DL------VEALKPEYVAPLV  222 (319)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGGGSCH-HH------HHHSCGGGTHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccccccCCh-hh------hccCCHHHHHHHH
Confidence            999999999999999999999988 999999999998 8876543221 11      1235788888653

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=100.00  E-value=7.8e-40  Score=271.94  Aligned_cols=218  Identities=23%  Similarity=0.265  Sum_probs=173.9

Q ss_pred             cccccCCCEEEEEcC--CCchhHHHHHHHHhCCCeEEEEecCcc-----------hHHHHHHHHHhcCCc---EEEEEee
Q 027248            6 MAKRFQGKVAIVTAS--TQGIGFGIAERLGLEGASVVVSSRKQK-----------NVDEAVVKLKARGIE---VIGVVCH   69 (226)
Q Consensus         6 ~~~~~~gk~vlItGa--~~giG~a~~~~l~~~g~~v~~~~r~~~-----------~~~~~~~~~~~~~~~---~~~~~~D   69 (226)
                      |.++++||+++||||  ++|||++++++|+++|++|++++|++.           +++.. +++. .+..   ..++.+|
T Consensus         3 ~~~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~d   80 (315)
T 2o2s_A            3 FPIDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDED-RKLP-DGSLIEFAGVYPLD   80 (315)
T ss_dssp             -CCCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHH-HBCT-TSCBCCCSCEEECC
T ss_pred             CcccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhh-hhhh-cccccccccccccc
Confidence            445678999999999  899999999999999999999998641           11111 1111 1111   2334444


Q ss_pred             ------------CC--------CHHHHHHHHHHHHHHhCCCCEEEEcCCCCC-CCCccccccHHHHHHHHHHHHHHHHHH
Q 027248           70 ------------VS--------NGQQRKNLINQTIEKFGKIDVVVSNAAANP-SVDSILQTKESVLDKLWDINVKSSILL  128 (226)
Q Consensus        70 ------------v~--------~~~~v~~~~~~~~~~~~~id~li~nag~~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~  128 (226)
                                  ++        ++++++.+++++.+++|++|+||||||+.. ...++.+.+.++|++++++|+.|++++
T Consensus        81 ~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l  160 (315)
T 2o2s_A           81 AAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSL  160 (315)
T ss_dssp             TTCSSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHH
T ss_pred             ccccccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHH
Confidence                        33        366899999999999999999999999763 246788899999999999999999999


Q ss_pred             HHHHhhhhhcCCEEEEEeccCCcCCCCCC-chhhHhHHHHHHHHHHHHHHhC--CCeEEEEEecCceeCCcccccccC--
Q 027248          129 LQDAAPHLQKGSSVVLISSIAGYQPQSSM-AMYGVTKTALLGLTKALAAEMA--PDTRVNCVAPGFVPTHFAEYITSN--  203 (226)
Q Consensus       129 ~~~~~~~l~~~~~iv~~sS~~~~~~~~~~-~~Y~~sKaa~~~~~~~la~e~~--~~i~v~~v~Pg~v~t~~~~~~~~~--  203 (226)
                      +++++|+|+++++||++||..+..+.++. ..|++||+|+++|+++|+.|++  .||+||+|+||+++|++.......  
T Consensus       161 ~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~~  240 (315)
T 2o2s_A          161 LQHFGPIMNEGGSAVTLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSGE  240 (315)
T ss_dssp             HHHHSTTEEEEEEEEEEEEGGGTSCCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTTCSSS
T ss_pred             HHHHHHHHhcCCEEEEEecccccccCCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhcccccc
Confidence            99999999777899999999998888887 5899999999999999999996  399999999999999987654311  


Q ss_pred             ch--------hhhhhccCCCCCchhhhccc
Q 027248          204 DG--------VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       204 ~~--------~~~~~~~~~~~~p~~~a~av  225 (226)
                      ..        +....+..++.+|+|+|+++
T Consensus       241 ~~~~~~~~~~~~~~~p~~r~~~pedvA~~v  270 (315)
T 2o2s_A          241 KSFIDYAIDYSYNNAPLRRDLHSDDVGGAA  270 (315)
T ss_dssp             SCHHHHHHHHHHHHSSSCCCCCHHHHHHHH
T ss_pred             chhHHHHHHHHhccCCCCCCCCHHHHHHHH
Confidence            11        11234667789999999865

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=100.00  E-value=1.7e-40  Score=266.51  Aligned_cols=207  Identities=23%  Similarity=0.287  Sum_probs=148.6

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      +++||+++||||++|||++++++|++ |++|++++|++++++...+     ...+.++.+|+++.++ ...+.+..+.++
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~-~~~~~~~~~~~~   74 (245)
T 3e9n_A            2 SLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE-----IEGVEPIESDIVKEVL-EEGGVDKLKNLD   74 (245)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT-----STTEEEEECCHHHHHH-TSSSCGGGTTCS
T ss_pred             CCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh-----hcCCcceecccchHHH-HHHHHHHHHhcC
Confidence            46789999999999999999999988 9999999999877655443     2357889999998877 444555556778


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc-CCEEEEEeccCCcCCCCCCchhhHhHHHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-GSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~-~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~  167 (226)
                      ++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|++ +++||++||..+..+.++...|++||+|+
T Consensus        75 ~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~  153 (245)
T 3e9n_A           75 HVDTLVHAAAVAR-DTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGCVIYINSGAGNGPHPGNTIYAASKHAL  153 (245)
T ss_dssp             CCSEEEECC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC----------CHHHHHHHHHH
T ss_pred             CCCEEEECCCcCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEcCcccccCCCCchHHHHHHHHH
Confidence            9999999999876 577888899999999999999999999999999854 68999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       168 ~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ++|+++|+.|+++ ||+||+|+||+++|++.+.......  ..+...++..|+|+|+++
T Consensus       154 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~--~~~~~~~~~~p~dvA~~i  210 (245)
T 3e9n_A          154 RGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMDSQG--TNFRPEIYIEPKEIANAI  210 (245)
T ss_dssp             HHHHHHHHHHHGGGTCEEEEEEECCC------------------CCGGGSCHHHHHHHH
T ss_pred             HHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhhhhhh--cccccccCCCHHHHHHHH
Confidence            9999999999988 9999999999999999877654322  234456678999999875

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=100.00  E-value=3.4e-39  Score=271.58  Aligned_cols=216  Identities=12%  Similarity=0.080  Sum_probs=180.2

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHh-CCCeEEEEecCcchHH------------HHHHHHHhcCCcEEEEEeeCCCHHHH
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGL-EGASVVVSSRKQKNVD------------EAVVKLKARGIEVIGVVCHVSNGQQR   76 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~-~g~~v~~~~r~~~~~~------------~~~~~~~~~~~~~~~~~~Dv~~~~~v   76 (226)
                      -.||++|||||++|||+++++.|++ +|++|++++|+.+..+            ...+++.+.+.++..+.+|+++++++
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v  124 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIK  124 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHH
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence            4689999999999999999999999 9999999999866532            23445566677889999999999999


Q ss_pred             HHHHHHHHHHhCCCCEEEEcCCCCC------------CCCcc---------------------ccccHHHHHHHHHHHHH
Q 027248           77 KNLINQTIEKFGKIDVVVSNAAANP------------SVDSI---------------------LQTKESVLDKLWDINVK  123 (226)
Q Consensus        77 ~~~~~~~~~~~~~id~li~nag~~~------------~~~~~---------------------~~~~~~~~~~~~~~N~~  123 (226)
                      +++++++.+.+|++|+||||||...            ..+++                     .+.+.++|++++++|..
T Consensus       125 ~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~  204 (405)
T 3zu3_A          125 QLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGG  204 (405)
T ss_dssp             HHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhch
Confidence            9999999999999999999999741            12344                     77899999999999999


Q ss_pred             HHH-HHHHHHhh-hh-hcCCEEEEEeccCCcCCCCCC--chhhHhHHHHHHHHHHHHHHhCC--CeEEEEEecCceeCCc
Q 027248          124 SSI-LLLQDAAP-HL-QKGSSVVLISSIAGYQPQSSM--AMYGVTKTALLGLTKALAAEMAP--DTRVNCVAPGFVPTHF  196 (226)
Q Consensus       124 ~~~-~~~~~~~~-~l-~~~~~iv~~sS~~~~~~~~~~--~~Y~~sKaa~~~~~~~la~e~~~--~i~v~~v~Pg~v~t~~  196 (226)
                      +.+ .+++++.+ .| +++|+||++||..+..+.|.+  +.|++||+|+++++|+|+.|+++  |||||+|+||+++|++
T Consensus       205 ~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i~T~~  284 (405)
T 3zu3_A          205 EDWQMWIDALLDAGVLAEGAQTTAFTYLGEKITHDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVVSQA  284 (405)
T ss_dssp             HHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCCCCHH
T ss_pred             hHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCcCCCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCCcCch
Confidence            998 77777764 44 346899999999999888887  99999999999999999999975  8999999999999998


Q ss_pred             ccccccCchhhh--hhccCCCCCchhhhccc
Q 027248          197 AEYITSNDGVVS--SVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       197 ~~~~~~~~~~~~--~~~~~~~~~p~~~a~av  225 (226)
                      ...+...+.+..  ...-++..+||++++++
T Consensus       285 s~~ip~~p~y~~~l~~~mkr~G~~Ed~a~~i  315 (405)
T 3zu3_A          285 SSAIPMMPLYLSLLFKVMKEKGTHEGCIEQV  315 (405)
T ss_dssp             HHTSTTHHHHHHHHHHHHHHHTCCCCHHHHH
T ss_pred             hhcCCCCcHHHHHHHHHHhcCCCcHHHHHHH
Confidence            876643322221  11355678899988765

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=100.00  E-value=3.3e-39  Score=265.98  Aligned_cols=217  Identities=22%  Similarity=0.245  Sum_probs=172.5

Q ss_pred             ccccCCCEEEEEcCC--CchhHHHHHHHHhCCCeEEEEecCcc-----------hHHHHHHHHHhcCC--c-EEEEEee-
Q 027248            7 AKRFQGKVAIVTAST--QGIGFGIAERLGLEGASVVVSSRKQK-----------NVDEAVVKLKARGI--E-VIGVVCH-   69 (226)
Q Consensus         7 ~~~~~gk~vlItGa~--~giG~a~~~~l~~~g~~v~~~~r~~~-----------~~~~~~~~~~~~~~--~-~~~~~~D-   69 (226)
                      .++++||+++||||+  +|||++++++|+++|++|++++|++.           +++.. +++.. +.  . ...+.+| 
T Consensus         3 ~~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~   80 (297)
T 1d7o_A            3 PIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQS-RVLPD-GSLMEIKKVYPLDA   80 (297)
T ss_dssp             CCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGG-GBCTT-SSBCCEEEEEEECT
T ss_pred             ccccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhh-hhhcc-ccccccccccccce
Confidence            446789999999999  99999999999999999999987631           11111 11111 11  1 2334444 


Q ss_pred             -------CC----C--------HHHHHHHHHHHHHHhCCCCEEEEcCCCCC-CCCccccccHHHHHHHHHHHHHHHHHHH
Q 027248           70 -------VS----N--------GQQRKNLINQTIEKFGKIDVVVSNAAANP-SVDSILQTKESVLDKLWDINVKSSILLL  129 (226)
Q Consensus        70 -------v~----~--------~~~v~~~~~~~~~~~~~id~li~nag~~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~  129 (226)
                             ++    +        +++++.+++++.++++++|+||||||+.. ...++.+.+.++|++++++|+.|+++++
T Consensus        81 ~~~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~  160 (297)
T 1d7o_A           81 VFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLL  160 (297)
T ss_dssp             TCCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             eccchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHH
Confidence                   22    2        56899999999999999999999999753 2467788999999999999999999999


Q ss_pred             HHHhhhhhcCCEEEEEeccCCcCCCCCC-chhhHhHHHHHHHHHHHHHHhC-C-CeEEEEEecCceeCCcccccccCch-
Q 027248          130 QDAAPHLQKGSSVVLISSIAGYQPQSSM-AMYGVTKTALLGLTKALAAEMA-P-DTRVNCVAPGFVPTHFAEYITSNDG-  205 (226)
Q Consensus       130 ~~~~~~l~~~~~iv~~sS~~~~~~~~~~-~~Y~~sKaa~~~~~~~la~e~~-~-~i~v~~v~Pg~v~t~~~~~~~~~~~-  205 (226)
                      ++++|+|+++++||++||..+..+.++. ..|++||+|+++|+++|+.|++ + ||+||+|+||+++|++.+....... 
T Consensus       161 ~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~  240 (297)
T 1d7o_A          161 SHFLPIMNPGGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTM  240 (297)
T ss_dssp             HHHGGGEEEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHHHH
T ss_pred             HHHHHHhccCceEEEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhccccHHH
Confidence            9999999777899999999998888887 6999999999999999999997 3 9999999999999998765321111 


Q ss_pred             ---hhhhhccCCCCCchhhhccc
Q 027248          206 ---VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       206 ---~~~~~~~~~~~~p~~~a~av  225 (226)
                         +....+..++.+|+|+|+++
T Consensus       241 ~~~~~~~~p~~r~~~pedvA~~v  263 (297)
T 1d7o_A          241 IEYSYNNAPIQKTLTADEVGNAA  263 (297)
T ss_dssp             HHHHHHHSSSCCCBCHHHHHHHH
T ss_pred             HHHhhccCCCCCCCCHHHHHHHH
Confidence               12234556788999999865

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=100.00  E-value=1.2e-39  Score=267.98  Aligned_cols=206  Identities=18%  Similarity=0.201  Sum_probs=165.6

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      .+++||+++||||++|||++++++|+++|++|++++|++++.+...+++   +.++.++.+|+++.++++++++++    
T Consensus        12 ~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~v~~~~~~~----   84 (291)
T 3rd5_A           12 PSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM---AGQVEVRELDLQDLSSVRRFADGV----   84 (291)
T ss_dssp             CCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS---SSEEEEEECCTTCHHHHHHHHHTC----
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---cCCeeEEEcCCCCHHHHHHHHHhc----
Confidence            4688999999999999999999999999999999999988877666554   567899999999999999888866    


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCC-------------C
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP-------------Q  154 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~-------------~  154 (226)
                      +++|+||||||+..   +..+.+.++|++++++|+.|+++++++++|.|.+  +||++||..+..+             .
T Consensus        85 ~~iD~lv~nAg~~~---~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--riv~isS~~~~~~~~~~~~~~~~~~~~  159 (291)
T 3rd5_A           85 SGADVLINNAGIMA---VPYALTVDGFESQIGTNHLGHFALTNLLLPRLTD--RVVTVSSMAHWPGRINLEDLNWRSRRY  159 (291)
T ss_dssp             CCEEEEEECCCCCS---CCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE--EEEEECCGGGTTCCCCSSCTTCSSSCC
T ss_pred             CCCCEEEECCcCCC---CcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh--heeEeechhhccCCCCcccccccccCC
Confidence            79999999999864   2356778899999999999999999999999976  9999999987754             3


Q ss_pred             CCCchhhHhHHHHHHHHHHHHHHhCC-C--eEEEEEecCceeCCcccccccCc-hhhhhhccCCC-CCchhhhccc
Q 027248          155 SSMAMYGVTKTALLGLTKALAAEMAP-D--TRVNCVAPGFVPTHFAEYITSND-GVVSSVSSLKL-SPPSSLTLAV  225 (226)
Q Consensus       155 ~~~~~Y~~sKaa~~~~~~~la~e~~~-~--i~v~~v~Pg~v~t~~~~~~~~~~-~~~~~~~~~~~-~~p~~~a~av  225 (226)
                      ++...|++||+|+++|++.|+.|+.+ |  |+||+|+||+++|++.+...... .........+. .+|+|+|.++
T Consensus       160 ~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~  235 (291)
T 3rd5_A          160 SPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKLGDALMSAATRVVATDADFGARQT  235 (291)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC--------------------CHHHHHHHHHH
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence            45678999999999999999999976 6  99999999999999987653221 11111222233 3499988764

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=100.00  E-value=1.8e-38  Score=254.05  Aligned_cols=211  Identities=24%  Similarity=0.342  Sum_probs=177.6

Q ss_pred             cccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus         6 ~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      |+.+++||+++||||++|||++++++|+++|++|++++|++++++...++.    ....++.+|++++++++++++    
T Consensus         1 m~~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~----   72 (244)
T 1cyd_A            1 MKLNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC----PGIEPVCVDLGDWDATEKALG----   72 (244)
T ss_dssp             --CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----TTCEEEECCTTCHHHHHHHHT----
T ss_pred             CccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----cCCCcEEecCCCHHHHHHHHH----
Confidence            345678999999999999999999999999999999999987766554432    235566999999999888776    


Q ss_pred             HhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc---CCEEEEEeccCCcCCCCCCchhhH
Q 027248           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGV  162 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~---~~~iv~~sS~~~~~~~~~~~~Y~~  162 (226)
                      .++++|+||||||... ..++.+.+.++|++++++|+.+++++++++.|.|++   .++||++||..+..+.++...|++
T Consensus        73 ~~~~id~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~  151 (244)
T 1cyd_A           73 GIGPVDLLVNNAALVI-MQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSS  151 (244)
T ss_dssp             TCCCCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHH
T ss_pred             HcCCCCEEEECCcccC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCCcchhHH
Confidence            5678999999999875 567788899999999999999999999999999853   479999999999988889999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchh----hhhhccCCCCCchhhhccc
Q 027248          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGV----VSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       163 sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~----~~~~~~~~~~~p~~~a~av  225 (226)
                      ||++++.+++.++.|+.+ +|++++++||++.|++.........+    ....+..++..|+|+|+++
T Consensus       152 sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  219 (244)
T 1cyd_A          152 TKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSI  219 (244)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccCHHHHHHHHhcCCccCCCCHHHHHHHH
Confidence            999999999999999987 99999999999999986543322222    2223456788999999865

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=3.1e-38  Score=253.03  Aligned_cols=199  Identities=21%  Similarity=0.302  Sum_probs=165.9

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCC--CeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEG--ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      ++|+++||||++|||++++++|+++|  ++|++++|+.++++...+ +  .+.++.++.+|++++++++++++++.+.++
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~-~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (250)
T 1yo6_A            2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS-I--KDSRVHVLPLTVTCDKSLDTFVSKVGEIVG   78 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT-C--CCTTEEEEECCTTCHHHHHHHHHHHHHHHG
T ss_pred             CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHh-c--cCCceEEEEeecCCHHHHHHHHHHHHHhcC
Confidence            47999999999999999999999999  999999999887765432 1  356788999999999999999999999998


Q ss_pred             --CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc-------------CCEEEEEeccCCcCC
Q 027248           89 --KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-------------GSSVVLISSIAGYQP  153 (226)
Q Consensus        89 --~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~-------------~~~iv~~sS~~~~~~  153 (226)
                        ++|+||||||......++.+.+.++|++++++|+.++++++++++|.|++             .++||++||..+..+
T Consensus        79 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~  158 (250)
T 1yo6_A           79 SDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSIT  158 (250)
T ss_dssp             GGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCST
T ss_pred             CCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccC
Confidence              99999999998753567788899999999999999999999999999842             579999999988776


Q ss_pred             C-------CCCchhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          154 Q-------SSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       154 ~-------~~~~~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      .       ++...|++||+++++|++.++.|+.+ ||++++|+||+++|++...             ....+|+++|+++
T Consensus       159 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-------------~~~~~~~~~a~~~  225 (250)
T 1yo6_A          159 DNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK-------------NAALTVEQSTAEL  225 (250)
T ss_dssp             TCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC--------------------------HHHHHHH
T ss_pred             CcccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC-------------CCCCCHHHHHHHH
Confidence            5       57889999999999999999999988 9999999999999998643             1356788877653

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=100.00  E-value=4.5e-39  Score=268.64  Aligned_cols=187  Identities=21%  Similarity=0.305  Sum_probs=161.1

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHh------cCCcEEEEEeeCCCHHHHHHHHHHHH
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA------RGIEVIGVVCHVSNGQQRKNLINQTI   84 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~------~~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (226)
                      +||+++||||++|||++++++|+++|++|++++|+.++++...+.+..      .+.++.++.+|++++++++++++++.
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   80 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT   80 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence            479999999999999999999999999999988876655444333322      13578899999999999999999873


Q ss_pred             HHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhH
Q 027248           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGV  162 (226)
Q Consensus        85 ~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~  162 (226)
                        ++++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++  .++||++||..+..+.++...|++
T Consensus        81 --~g~iD~lVnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~~~~~Y~a  157 (327)
T 1jtv_A           81 --EGRVDVLVCNAGLGL-LGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCA  157 (327)
T ss_dssp             --TSCCSEEEECCCCCC-CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHH
T ss_pred             --cCCCCEEEECCCcCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCCCChHHHH
Confidence              589999999999875 567888999999999999999999999999999953  579999999999998899999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCccccc
Q 027248          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYI  200 (226)
Q Consensus       163 sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~  200 (226)
                      ||+++++|+++|+.|+.+ ||+||+|+||+++|+|.+..
T Consensus       158 SK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~  196 (327)
T 1jtv_A          158 SKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKV  196 (327)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhh
Confidence            999999999999999988 99999999999999997654

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=100.00  E-value=1.9e-38  Score=275.15  Aligned_cols=214  Identities=25%  Similarity=0.339  Sum_probs=176.6

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      ..++||+++||||++|||++++++|+++|++|++++|+... +...+...+.  .+.++.+|+++.++++++++++.+++
T Consensus       209 ~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~-~~l~~~~~~~--~~~~~~~Dvtd~~~v~~~~~~~~~~~  285 (454)
T 3u0b_A          209 KPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAA-EDLKRVADKV--GGTALTLDVTADDAVDKITAHVTEHH  285 (454)
T ss_dssp             STTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGH-HHHHHHHHHH--TCEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred             cCCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccH-HHHHHHHHHc--CCeEEEEecCCHHHHHHHHHHHHHHc
Confidence            34689999999999999999999999999999999997532 2222222222  24578999999999999999999999


Q ss_pred             CC-CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhh--cCCEEEEEeccCCcCCCCCCchhhHhH
Q 027248           88 GK-IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTK  164 (226)
Q Consensus        88 ~~-id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~--~~~~iv~~sS~~~~~~~~~~~~Y~~sK  164 (226)
                      +. +|+||||||+.. ...+.+.+.++|++++++|+.|++++.+++.|.|+  +.++||++||..+..+.++.+.|++||
T Consensus       286 g~~id~lV~nAGv~~-~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g~~~YaasK  364 (454)
T 3u0b_A          286 GGKVDILVNNAGITR-DKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTK  364 (454)
T ss_dssp             TTCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred             CCCceEEEECCcccC-CCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCCCHHHHHHH
Confidence            76 999999999986 57889999999999999999999999999999885  358999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCc--hhhhhhccCCCCCchhhhccc
Q 027248          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND--GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       165 aa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~--~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +++++|+++|+.|+.+ ||+||+|+||+++|+|.+......  ......+..+..+|+|+|+++
T Consensus       365 aal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~l~r~g~pedvA~~v  428 (454)
T 3u0b_A          365 AGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLATREVGRRLNSLFQGGQPVDVAELI  428 (454)
T ss_dssp             HHHHHHHHHHHHHHHTTTCEEEEEEECSBCC----------CHHHHHSBTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchhhHHHHHhhccccCCCCHHHHHHHH
Confidence            9999999999999988 999999999999999987654322  122333455678999999875

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=100.00  E-value=5.4e-38  Score=254.58  Aligned_cols=204  Identities=20%  Similarity=0.249  Sum_probs=175.5

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCC---CeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEG---ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQT   83 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g---~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   83 (226)
                      ..++++|+++||||++|||++++++|+++|   ++|++++|+.++.+.. +++.+.+.++.++.+|++++++++++++++
T Consensus        16 ~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~-~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~   94 (267)
T 1sny_A           16 PRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL-EDLAKNHSNIHILEIDLRNFDAYDKLVADI   94 (267)
T ss_dssp             ----CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHH-HHHHHHCTTEEEEECCTTCGGGHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHH-HHhhccCCceEEEEecCCChHHHHHHHHHH
Confidence            356789999999999999999999999999   9999999998876643 445444668899999999999999999999


Q ss_pred             HHHhC--CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc-------------CCEEEEEecc
Q 027248           84 IEKFG--KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-------------GSSVVLISSI  148 (226)
Q Consensus        84 ~~~~~--~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~-------------~~~iv~~sS~  148 (226)
                      .+.++  ++|+||||||+.....++.+.+.++|++++++|+.++++++++++|.|++             .++||++||.
T Consensus        95 ~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~  174 (267)
T 1sny_A           95 EGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSI  174 (267)
T ss_dssp             HHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCG
T ss_pred             HHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecc
Confidence            99998  89999999998753467788899999999999999999999999999853             4799999999


Q ss_pred             CCcCCCC---CCchhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhcc
Q 027248          149 AGYQPQS---SMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLA  224 (226)
Q Consensus       149 ~~~~~~~---~~~~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~a  224 (226)
                      .+..+.+   +...|++||+++++|++.++.|+.+ +|++++|+||+++|++...             ....+|+++|+.
T Consensus       175 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-------------~~~~~~~~~a~~  241 (267)
T 1sny_A          175 LGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS-------------SAPLDVPTSTGQ  241 (267)
T ss_dssp             GGCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT-------------TCSBCHHHHHHH
T ss_pred             cccccCCCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC-------------CCCCCHHHHHHH
Confidence            8876653   7788999999999999999999988 9999999999999998643             134667777654

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-38  Score=256.36  Aligned_cols=205  Identities=24%  Similarity=0.384  Sum_probs=168.9

Q ss_pred             ccccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHH
Q 027248            5 KMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTI   84 (226)
Q Consensus         5 ~~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (226)
                      .....++||+++||||++|||++++++|+++|++|++++|+++..    +++   + .+.++ +|+  .++++.+++++ 
T Consensus        12 ~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~----~~~---~-~~~~~-~D~--~~~~~~~~~~~-   79 (249)
T 1o5i_A           12 HMELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELL----KRS---G-HRYVV-CDL--RKDLDLLFEKV-   79 (249)
T ss_dssp             ----CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH----HHT---C-SEEEE-CCT--TTCHHHHHHHS-
T ss_pred             hHHhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHH----Hhh---C-CeEEE-eeH--HHHHHHHHHHh-
Confidence            345678999999999999999999999999999999999987332    222   2 56666 999  55566666544 


Q ss_pred             HHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhH
Q 027248           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGV  162 (226)
Q Consensus        85 ~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~  162 (226)
                         .++|+||||||... ..++.+.+.++|++++++|+.++++++++++|.|++  .++||++||..+..+.++...|++
T Consensus        80 ---~~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  155 (249)
T 1o5i_A           80 ---KEVDILVLNAGGPK-AGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNS  155 (249)
T ss_dssp             ---CCCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHH
T ss_pred             ---cCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCCCCchHHH
Confidence               48999999999875 567888999999999999999999999999999954  479999999999999899999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCc---hhhhhhccCCCCCchhhhccc
Q 027248          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND---GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       163 sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ||+++++|+++++.|+.+ ||+||+|+||+++|++........   .+....+..++.+|+|+|+++
T Consensus       156 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~i  222 (249)
T 1o5i_A          156 ARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVV  222 (249)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccchhhHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            999999999999999988 999999999999999875432211   222334556788999999875

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=100.00  E-value=4.4e-38  Score=255.45  Aligned_cols=200  Identities=24%  Similarity=0.258  Sum_probs=173.0

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHh-CCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGL-EGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~-~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      ++|+++||||++|||++++++|++ +|++|++++|+.++.+...+++...+.++.++.+|+++.++++.+++++.+.+++
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   82 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG   82 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            579999999999999999999999 9999999999998888888888777778889999999999999999999999999


Q ss_pred             CCEEEEcCCCCCCCCcccccc-HHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCC---------------
Q 027248           90 IDVVVSNAAANPSVDSILQTK-ESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP---------------  153 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~-~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~---------------  153 (226)
                      +|+||||||.... .. .+.+ .++|++++++|+.|+++++++++|.|++.++||++||..+..+               
T Consensus        83 id~li~~Ag~~~~-~~-~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~  160 (276)
T 1wma_A           83 LDVLVNNAGIAFK-VA-DPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSE  160 (276)
T ss_dssp             EEEEEECCCCCCC-TT-CCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCS
T ss_pred             CCEEEECCccccc-CC-CccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhcccc
Confidence            9999999998652 22 2333 5899999999999999999999999977789999999876521               


Q ss_pred             --------------------------CCCCchhhHhHHHHHHHHHHHHHHhCC-----CeEEEEEecCceeCCccccccc
Q 027248          154 --------------------------QSSMAMYGVTKTALLGLTKALAAEMAP-----DTRVNCVAPGFVPTHFAEYITS  202 (226)
Q Consensus       154 --------------------------~~~~~~Y~~sKaa~~~~~~~la~e~~~-----~i~v~~v~Pg~v~t~~~~~~~~  202 (226)
                                                ..+...|++||++++.|++.++.|+.+     ||+|++|+||+++|++...   
T Consensus       161 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~---  237 (276)
T 1wma_A          161 TITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP---  237 (276)
T ss_dssp             SCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT---
T ss_pred             ccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc---
Confidence                                      012378999999999999999999854     8999999999999998653   


Q ss_pred             CchhhhhhccCCCCCchhhhccc
Q 027248          203 NDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       203 ~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                                ..+.+|+++|+++
T Consensus       238 ----------~~~~~~~~~a~~~  250 (276)
T 1wma_A          238 ----------KATKSPEEGAETP  250 (276)
T ss_dssp             ----------TCSBCHHHHTHHH
T ss_pred             ----------cccCChhHhhhhH
Confidence                      2356788877654

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=100.00  E-value=2.5e-38  Score=283.66  Aligned_cols=211  Identities=26%  Similarity=0.353  Sum_probs=165.0

Q ss_pred             ccccccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEec---------CcchHHHHHHHHHhcCCcEEEEEeeCCCH
Q 027248            3 KMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSR---------KQKNVDEAVVKLKARGIEVIGVVCHVSNG   73 (226)
Q Consensus         3 ~~~~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   73 (226)
                      +.+...+++||+++||||++|||++++++|+++|++|++++|         +.+.++...+++...+..+   .+|+++.
T Consensus        10 ~~~~~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~D~~d~   86 (613)
T 3oml_A           10 SSDGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEA---VADYNSV   86 (613)
T ss_dssp             -----CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCE---EECCCCG
T ss_pred             CcccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeE---EEEeCCH
Confidence            344556789999999999999999999999999999999988         7778888888888776654   3799999


Q ss_pred             HHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCc
Q 027248           74 QQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGY  151 (226)
Q Consensus        74 ~~v~~~~~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~  151 (226)
                      ++++++++++.+.++++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++  .++||++||.++.
T Consensus        87 ~~~~~~~~~~~~~~g~iDiLVnnAGi~~-~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~  165 (613)
T 3oml_A           87 IDGAKVIETAIKAFGRVDILVNNAGILR-DRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGI  165 (613)
T ss_dssp             GGHHHHHC----------CEECCCCCCC-CCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHH
T ss_pred             HHHHHHHHHHHHHCCCCcEEEECCCCCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHc
Confidence            9999999999999999999999999986 578889999999999999999999999999999965  3799999999999


Q ss_pred             CCCCCCchhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          152 QPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       152 ~~~~~~~~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      .+.++...|++||+|+++|+++|+.|+++ ||+||+|+||++ |+|........ .      ....+|+++|.++
T Consensus       166 ~~~~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~-t~~~~~~~~~~-~------~~~~~pedvA~~v  232 (613)
T 3oml_A          166 YGNFGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA-SRMTEGILPDI-L------FNELKPKLIAPVV  232 (613)
T ss_dssp             HCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------CCCCCHH-H------HTTCCGGGTHHHH
T ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC-Chhhhhccchh-h------hhcCCHHHHHHHH
Confidence            99999999999999999999999999998 999999999975 66665543221 1      2345899998765

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=1.8e-37  Score=247.69  Aligned_cols=200  Identities=24%  Similarity=0.309  Sum_probs=170.4

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id   91 (226)
                      +|+++||||++|||++++++|+++|++|++++|+++ .           .++.++.+|++++++++++++++ +.++++|
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~-----------~~~~~~~~D~~~~~~~~~~~~~~-~~~~~~d   68 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G-----------EDLIYVEGDVTREEDVRRAVARA-QEEAPLF   68 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S-----------SSSEEEECCTTCHHHHHHHHHHH-HHHSCEE
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c-----------cceEEEeCCCCCHHHHHHHHHHH-HhhCCce
Confidence            689999999999999999999999999999999875 1           13478899999999999999999 8889999


Q ss_pred             EEEEcCCCCCCCCccccc----cHHHHHHHHHHHHHHHHHHHHHHhhhhhcCC--------EEEEEeccCCcCCCCCCch
Q 027248           92 VVVSNAAANPSVDSILQT----KESVLDKLWDINVKSSILLLQDAAPHLQKGS--------SVVLISSIAGYQPQSSMAM  159 (226)
Q Consensus        92 ~li~nag~~~~~~~~~~~----~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~--------~iv~~sS~~~~~~~~~~~~  159 (226)
                      +||||||... ..++.+.    +.++|++++++|+.+++++++++.|.|++.+        +||++||..+..+.++...
T Consensus        69 ~li~~ag~~~-~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~  147 (242)
T 1uay_A           69 AVVSAAGVGL-AEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAA  147 (242)
T ss_dssp             EEEECCCCCC-CCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHH
T ss_pred             EEEEcccccC-cccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCch
Confidence            9999999875 3444443    3459999999999999999999999986533        9999999999888889999


Q ss_pred             hhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC--chhhhhhcc-CCCCCchhhhccc
Q 027248          160 YGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN--DGVVSSVSS-LKLSPPSSLTLAV  225 (226)
Q Consensus       160 Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~-~~~~~p~~~a~av  225 (226)
                      |++||++++.+++.++.|+.+ ||++++|+||+++|++.......  ..+....+. .++..|+|+|+++
T Consensus       148 Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  217 (242)
T 1uay_A          148 YAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPRLGRPEEYAALV  217 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHHHHHTTCCSSCSCCCHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccchhHHHHHHhhCCCcccCCCHHHHHHHH
Confidence            999999999999999999988 99999999999999987654221  112223344 6678999999864

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=100.00  E-value=1.1e-36  Score=260.10  Aligned_cols=216  Identities=13%  Similarity=0.120  Sum_probs=177.3

Q ss_pred             cCCCEEEEEcCCCchhHH--HHHHHHhCCCeEEEEecCcch------------HHHHHHHHHhcCCcEEEEEeeCCCHHH
Q 027248           10 FQGKVAIVTASTQGIGFG--IAERLGLEGASVVVSSRKQKN------------VDEAVVKLKARGIEVIGVVCHVSNGQQ   75 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a--~~~~l~~~g~~v~~~~r~~~~------------~~~~~~~~~~~~~~~~~~~~Dv~~~~~   75 (226)
                      ..||+++||||++|||++  +++.|+++|++|++++|+.+.            .+...+...+.+.++..+.+|++++++
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~  137 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNET  137 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHH
Confidence            579999999999999999  999999999999999998654            244444555667789999999999999


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCC------------CCCcc---------------------ccccHHHHHHHHHHHH
Q 027248           76 RKNLINQTIEKFGKIDVVVSNAAANP------------SVDSI---------------------LQTKESVLDKLWDINV  122 (226)
Q Consensus        76 v~~~~~~~~~~~~~id~li~nag~~~------------~~~~~---------------------~~~~~~~~~~~~~~N~  122 (226)
                      ++++++++.+.+|++|+||||||...            ..+++                     .+.+.++|++++++|.
T Consensus       138 v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~  217 (418)
T 4eue_A          138 KDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMG  217 (418)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhh
Confidence            99999999999999999999999741            12333                     4568999999999999


Q ss_pred             HHHH-HHHHHHhhh-h-hcCCEEEEEeccCCcCCCCCC--chhhHhHHHHHHHHHHHHHHhCC--CeEEEEEecCceeCC
Q 027248          123 KSSI-LLLQDAAPH-L-QKGSSVVLISSIAGYQPQSSM--AMYGVTKTALLGLTKALAAEMAP--DTRVNCVAPGFVPTH  195 (226)
Q Consensus       123 ~~~~-~~~~~~~~~-l-~~~~~iv~~sS~~~~~~~~~~--~~Y~~sKaa~~~~~~~la~e~~~--~i~v~~v~Pg~v~t~  195 (226)
                      .+.+ .+++++.+. + +++++||++||..+..+.|.+  +.|++||+|+++|+++|+.|+++  ||+||+|+||+++|+
T Consensus       218 ~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v~T~  297 (418)
T 4eue_A          218 GEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTYKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKALVTK  297 (418)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCCCCH
T ss_pred             HHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcCcCh
Confidence            9887 777777653 3 346899999999999888888  99999999999999999999986  999999999999999


Q ss_pred             cccccccCchhhh--hhccCCCCCchhhhccc
Q 027248          196 FAEYITSNDGVVS--SVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       196 ~~~~~~~~~~~~~--~~~~~~~~~p~~~a~av  225 (226)
                      +...+.....+..  ...-.+..+||++++++
T Consensus       298 ~s~~ip~~p~y~~~~~~~mk~~G~~E~v~e~~  329 (418)
T 4eue_A          298 ASAYIPTFPLYAAILYKVMKEKNIHENCIMQI  329 (418)
T ss_dssp             HHHTSTTHHHHHHHHHHHHHHTTCCCCHHHHH
T ss_pred             hhhcCCCCcHHHHHHHHHHhhcCChHHHHHHH
Confidence            8876643222111  11223467888888764

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=100.00  E-value=2.3e-35  Score=229.69  Aligned_cols=183  Identities=20%  Similarity=0.274  Sum_probs=161.9

Q ss_pred             CC-EEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           12 GK-VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        12 gk-~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      || +++||||+||||++++++|+ +|++|++++|+++                 .+.+|++++++++++++++    +++
T Consensus         2 ~kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-----------------~~~~D~~~~~~~~~~~~~~----~~~   59 (202)
T 3d7l_A            2 NAMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-----------------DVTVDITNIDSIKKMYEQV----GKV   59 (202)
T ss_dssp             CSCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-----------------SEECCTTCHHHHHHHHHHH----CCE
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-----------------ceeeecCCHHHHHHHHHHh----CCC
Confidence            45 79999999999999999999 9999999999875                 3679999999999888764    799


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHhHHHHHHH
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGL  170 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~  170 (226)
                      |+||||||... ..++.+.+.++|++.+++|+.+++++++++.|.|+++++||++||..+..+.++...|++||++++.+
T Consensus        60 d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~~  138 (202)
T 3d7l_A           60 DAIVSATGSAT-FSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMEDPIVQGASAAMANGAVTAF  138 (202)
T ss_dssp             EEEEECCCCCC-CCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred             CEEEECCCCCC-CCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcCCCCccHHHHHHHHHHHHH
Confidence            99999999865 56778889999999999999999999999999987678999999999988889999999999999999


Q ss_pred             HHHHHHHhCC-CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          171 TKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       171 ~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ++.++.|+ + ||++++++||++.|++...       ....+...+.+|+|+|+++
T Consensus       139 ~~~~~~e~-~~gi~v~~v~pg~v~~~~~~~-------~~~~~~~~~~~~~dva~~~  186 (202)
T 3d7l_A          139 AKSAAIEM-PRGIRINTVSPNVLEESWDKL-------EPFFEGFLPVPAAKVARAF  186 (202)
T ss_dssp             HHHHTTSC-STTCEEEEEEECCBGGGHHHH-------GGGSTTCCCBCHHHHHHHH
T ss_pred             HHHHHHHc-cCCeEEEEEecCccCCchhhh-------hhhccccCCCCHHHHHHHH
Confidence            99999999 6 9999999999999997532       1223345678999999764

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=100.00  E-value=2e-36  Score=244.02  Aligned_cols=189  Identities=21%  Similarity=0.272  Sum_probs=147.0

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCE
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~   92 (226)
                      |+++||||++|||++++++|+++|++|++++|++++++.          .   +.+|+++.++++++++++   .+++|+
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~----------~---~~~Dl~~~~~v~~~~~~~---~~~id~   65 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA----------D---LSTAEGRKQAIADVLAKC---SKGMDG   65 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC----------C---TTSHHHHHHHHHHHHTTC---TTCCSE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc----------c---cccCCCCHHHHHHHHHHh---CCCCCE
Confidence            689999999999999999999999999999999865421          1   568999999988887743   379999


Q ss_pred             EEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcC--CEEEEEeccCCc-------------------
Q 027248           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKG--SSVVLISSIAGY-------------------  151 (226)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~--~~iv~~sS~~~~-------------------  151 (226)
                      ||||||+....        +.|++++++|+.++++++++++|+|++.  ++||++||..+.                   
T Consensus        66 lv~~Ag~~~~~--------~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~  137 (257)
T 1fjh_A           66 LVLCAGLGPQT--------KVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEA  137 (257)
T ss_dssp             EEECCCCCTTC--------SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHH
T ss_pred             EEECCCCCCCc--------ccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchh
Confidence            99999975411        2389999999999999999999999654  899999999887                   


Q ss_pred             ---------CCCCCCchhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCc---hhhh--hhccCCCC
Q 027248          152 ---------QPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND---GVVS--SVSSLKLS  216 (226)
Q Consensus       152 ---------~~~~~~~~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~---~~~~--~~~~~~~~  216 (226)
                               .+.++...|++||++++.|++.++.|+.+ ||+||+|+||+++|++.+......   .+..  ..+..++.
T Consensus       138 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (257)
T 1fjh_A          138 KARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRRA  217 (257)
T ss_dssp             HHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCCSTTSCC
T ss_pred             hhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccchhHHHHHHhcccccCCCC
Confidence                     34457789999999999999999999987 999999999999999976542211   1111  23445689


Q ss_pred             Cchhhhccc
Q 027248          217 PPSSLTLAV  225 (226)
Q Consensus       217 ~p~~~a~av  225 (226)
                      +|+|+|+++
T Consensus       218 ~~~dvA~~~  226 (257)
T 1fjh_A          218 EPSEMASVI  226 (257)
T ss_dssp             CTHHHHHHH
T ss_pred             CHHHHHHHH
Confidence            999999875

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=100.00  E-value=1.2e-34  Score=226.16  Aligned_cols=191  Identities=18%  Similarity=0.246  Sum_probs=162.2

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCE
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~   92 (226)
                      |+++||||+||||++++++|+++  +|++++|++++++...+++..     .++.+|+++++++++++++    ++++|+
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~-----~~~~~D~~~~~~~~~~~~~----~~~id~   69 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGA-----RALPADLADELEAKALLEE----AGPLDL   69 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTC-----EECCCCTTSHHHHHHHHHH----HCSEEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccC-----cEEEeeCCCHHHHHHHHHh----cCCCCE
Confidence            57999999999999999999999  999999998877776665531     6788999999999998876    789999


Q ss_pred             EEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHhHHHHHHHHH
Q 027248           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTK  172 (226)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~  172 (226)
                      ||||||... ..++.+.+.++|++++++|+.+++++++++..  .+.++||++||..+..+.++...|++||++++.+++
T Consensus        70 vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~  146 (207)
T 2yut_A           70 LVHAVGKAG-RASVREAGRDLVEEMLAAHLLTAAFVLKHARF--QKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAYLE  146 (207)
T ss_dssp             EEECCCCCC-CBCSCC---CHHHHHHHHHHHHHHHHHHHCCE--EEEEEEEEECCCHHHHSSTTBHHHHHHHHHHHHHHH
T ss_pred             EEECCCcCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHh--cCCcEEEEEcChhhccCCCCcchHHHHHHHHHHHHH
Confidence            999999875 56777888999999999999999999999922  234799999999998888999999999999999999


Q ss_pred             HHHHHhCC-CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          173 ALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       173 ~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      .++.|+.+ ||++++++||++.|++.....        .+..++..|+|+|+++
T Consensus       147 ~~~~~~~~~gi~v~~v~pg~v~t~~~~~~~--------~~~~~~~~~~dva~~~  192 (207)
T 2yut_A          147 AARKELLREGVHLVLVRLPAVATGLWAPLG--------GPPKGALSPEEAARKV  192 (207)
T ss_dssp             HHHHHHHTTTCEEEEECCCCBCSGGGGGGT--------SCCTTCBCHHHHHHHH
T ss_pred             HHHHHHhhhCCEEEEEecCcccCCCccccC--------CCCCCCCCHHHHHHHH
Confidence            99999987 999999999999999843211        1235688999998864

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=100.00  E-value=5.3e-34  Score=274.23  Aligned_cols=214  Identities=19%  Similarity=0.222  Sum_probs=175.1

Q ss_pred             cccCCCEEEEEcCCCc-hhHHHHHHHHhCCCeEEEE-ecCcchHHHHHHHHHh----cCCcEEEEEeeCCCHHHHHHHHH
Q 027248            8 KRFQGKVAIVTASTQG-IGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKA----RGIEVIGVVCHVSNGQQRKNLIN   81 (226)
Q Consensus         8 ~~~~gk~vlItGa~~g-iG~a~~~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~~~   81 (226)
                      ++++||++|||||++| ||+++++.|+++|++|+++ +|+.++++...+++.+    .+.++.++.+|+++.++++.+++
T Consensus       671 m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~  750 (1887)
T 2uv8_A          671 VTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIE  750 (1887)
T ss_dssp             BCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHH
Confidence            4688999999999998 9999999999999999998 6777777766666533    25678899999999999999999


Q ss_pred             HHHHH-----hC-CCCEEEEcCCCCCCCC-cccccc--HHHHHHHHHHHHHHHHHHHHHH--hhhhhcC--CEEEEEecc
Q 027248           82 QTIEK-----FG-KIDVVVSNAAANPSVD-SILQTK--ESVLDKLWDINVKSSILLLQDA--APHLQKG--SSVVLISSI  148 (226)
Q Consensus        82 ~~~~~-----~~-~id~li~nag~~~~~~-~~~~~~--~~~~~~~~~~N~~~~~~~~~~~--~~~l~~~--~~iv~~sS~  148 (226)
                      ++.+.     +| ++|+||||||+.. .. ++.+.+  .++|++++++|+.+++.+++.+  +|.|++.  ++||++||.
T Consensus       751 ~i~~~~~~~G~G~~LDiLVNNAGi~~-~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~  829 (1887)
T 2uv8_A          751 FIYDTEKNGGLGWDLDAIIPFAAIPE-QGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPN  829 (1887)
T ss_dssp             HHHSCTTTTSCCCCCSEEEECCCCCC-CSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSC
T ss_pred             HHHHhccccccCCCCeEEEECCCcCC-CCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcCh
Confidence            99988     66 9999999999875 45 788888  8999999999999999999998  7888653  699999999


Q ss_pred             CCcCCCCCCchhhHhHHHHHHH-HHHHHHHhCCCeEEEEEecCcee-CCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          149 AGYQPQSSMAMYGVTKTALLGL-TKALAAEMAPDTRVNCVAPGFVP-THFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       149 ~~~~~~~~~~~Y~~sKaa~~~~-~~~la~e~~~~i~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      .+..+  +...|++||+|+++| ++.++.|+++.|+||+|+||+++ |+|..............+. +..+|+|+|.++
T Consensus       830 ag~~g--g~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~tT~m~~~~~~~~~~~~~~pl-r~~sPEEVA~av  905 (1887)
T 2uv8_A          830 HGTFG--GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSANNIIAEGIEKMGV-RTFSQKEMAFNL  905 (1887)
T ss_dssp             TTCSS--CBTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEECC-----CCTTHHHHHTTSC-CCEEHHHHHHHH
T ss_pred             HhccC--CCchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEecccccccccccchhHHHHHHhcCC-CCCCHHHHHHHH
Confidence            98876  678999999999999 89999998777999999999999 8886541111112222222 456899998764

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=100.00  E-value=4e-34  Score=251.91  Aligned_cols=207  Identities=15%  Similarity=0.166  Sum_probs=174.3

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCe-EEEE-ecC-------------cchHHHHHHHHHhcCCcEEEEEeeCCCHHH
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGAS-VVVS-SRK-------------QKNVDEAVVKLKARGIEVIGVVCHVSNGQQ   75 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~-v~~~-~r~-------------~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   75 (226)
                      .+|++|||||++|||++++++|+++|++ |+++ +|+             .+.+++..+++.+.+.++.++.||++|.++
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~  329 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEA  329 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHH
Confidence            5899999999999999999999999987 7777 898             355677788888888899999999999999


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc---CCEEEEEeccCCcC
Q 027248           76 RKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQ  152 (226)
Q Consensus        76 v~~~~~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~---~~~iv~~sS~~~~~  152 (226)
                      ++.+++++. +++++|+||||||+.. ...+.+.+.++|++++++|+.|++++.+++.+.+++   .++||++||.++..
T Consensus       330 v~~~~~~i~-~~g~id~vVh~AGv~~-~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~  407 (525)
T 3qp9_A          330 AARLLAGVS-DAHPLSAVLHLPPTVD-SEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIW  407 (525)
T ss_dssp             HHHHHHTSC-TTSCEEEEEECCCCCC-CCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTT
T ss_pred             HHHHHHHHH-hcCCCcEEEECCcCCC-CCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcC
Confidence            999999988 7899999999999986 578889999999999999999999999999999854   47999999999999


Q ss_pred             CCCCCchhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          153 PQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       153 ~~~~~~~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +.++.+.|+++|+++++|+    .++.. ||++++|+||+++|+|.........+.+  ......+|+++++++
T Consensus       408 g~~g~~~YaaaKa~l~~lA----~~~~~~gi~v~sI~pG~~~tgm~~~~~~~~~~~~--~g~~~l~pee~a~~l  475 (525)
T 3qp9_A          408 GGAGQGAYAAGTAFLDALA----GQHRADGPTVTSVAWSPWEGSRVTEGATGERLRR--LGLRPLAPATALTAL  475 (525)
T ss_dssp             CCTTCHHHHHHHHHHHHHH----TSCCSSCCEEEEEEECCBTTSGGGSSHHHHHHHH--TTBCCBCHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHH----HHHHhCCCCEEEEECCccccccccchhhHHHHHh--cCCCCCCHHHHHHHH
Confidence            9999999999999999874    55666 9999999999999999743211111111  122457888888764

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=9.1e-35  Score=272.36  Aligned_cols=216  Identities=19%  Similarity=0.216  Sum_probs=178.1

Q ss_pred             cccccCCCEEEEEcCCCc-hhHHHHHHHHhCCCeEEEE-ecCcchHHHHHHHHHhc----CCcEEEEEeeCCCHHHHHHH
Q 027248            6 MAKRFQGKVAIVTASTQG-IGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKAR----GIEVIGVVCHVSNGQQRKNL   79 (226)
Q Consensus         6 ~~~~~~gk~vlItGa~~g-iG~a~~~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~   79 (226)
                      +.++++||++|||||++| ||++++++|+++|++|+++ +|+.++++...+++.+.    +.++.++.+|+++.++++.+
T Consensus       470 ~~msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaL  549 (1688)
T 2pff_A          470 XXVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEAL  549 (1688)
T ss_dssp             SCCCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHH
T ss_pred             cccccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHH
Confidence            345688999999999998 9999999999999999988 67777776666666332    55788999999999999999


Q ss_pred             HHHHHHH-----hC-CCCEEEEcCCCCCCCC-cccccc--HHHHHHHHHHHHHHHHHHHHHH--hhhhhcC--CEEEEEe
Q 027248           80 INQTIEK-----FG-KIDVVVSNAAANPSVD-SILQTK--ESVLDKLWDINVKSSILLLQDA--APHLQKG--SSVVLIS  146 (226)
Q Consensus        80 ~~~~~~~-----~~-~id~li~nag~~~~~~-~~~~~~--~~~~~~~~~~N~~~~~~~~~~~--~~~l~~~--~~iv~~s  146 (226)
                      ++++.+.     +| ++|+||||||+.. .. ++.+.+  .++|++++++|+.+++.+++++  .|.|++.  ++||++|
T Consensus       550 Ve~I~e~~~~~GfG~~IDILVNNAGI~~-~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnIS  628 (1688)
T 2pff_A          550 IEFIYDTEKNGGLGWDLDAIIPFAAIPE-QGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMS  628 (1688)
T ss_dssp             HHHHHSCTTSSSCCCCCCEEECCCCCCC-CSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCC
T ss_pred             HHHHHHhccccccCCCCeEEEECCCcCC-CCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEE
Confidence            9999988     77 9999999999875 44 777887  8999999999999999999999  7888654  6999999


Q ss_pred             ccCCcCCCCCCchhhHhHHHHHHH-HHHHHHHhCCCeEEEEEecCcee-CCcccccccCchhhhhhccCCCCCchhhhcc
Q 027248          147 SIAGYQPQSSMAMYGVTKTALLGL-TKALAAEMAPDTRVNCVAPGFVP-THFAEYITSNDGVVSSVSSLKLSPPSSLTLA  224 (226)
Q Consensus       147 S~~~~~~~~~~~~Y~~sKaa~~~~-~~~la~e~~~~i~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~a  224 (226)
                      |.++..+  +...|++||+|+++| ++.++.|+++.|+||+|+||+++ |+|..............+. +..+|+|+|.+
T Consensus       629 SiAG~~G--g~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~TT~M~~~~e~~~~~l~~ipl-R~~sPEEVA~a  705 (1688)
T 2pff_A          629 PNHGTFG--GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSANNIIAEGIEKMGV-RTFSQKEMAFN  705 (1688)
T ss_dssp             SCTTTSS--CBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCCCSSSCTTTTCSTTTSSSSC-CCCCCCTTHHH
T ss_pred             ChHhccC--CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcCCcccCCchHHHHHHHhCCC-CCCCHHHHHHH
Confidence            9998766  678999999999999 78888888778999999999999 7886531111112222222 45689999986


Q ss_pred             c
Q 027248          225 V  225 (226)
Q Consensus       225 v  225 (226)
                      +
T Consensus       706 I  706 (1688)
T 2pff_A          706 L  706 (1688)
T ss_dssp             H
T ss_pred             H
Confidence            5

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=100.00  E-value=3.6e-33  Score=268.07  Aligned_cols=215  Identities=20%  Similarity=0.221  Sum_probs=174.7

Q ss_pred             ccccCCCEEEEEcCCCc-hhHHHHHHHHhCCCeEEEEe-cCcchHHHHHHHHH----hcCCcEEEEEeeCCCHHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQG-IGFGIAERLGLEGASVVVSS-RKQKNVDEAVVKLK----ARGIEVIGVVCHVSNGQQRKNLI   80 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~g-iG~a~~~~l~~~g~~v~~~~-r~~~~~~~~~~~~~----~~~~~~~~~~~Dv~~~~~v~~~~   80 (226)
                      .++++||++|||||++| ||+++++.|+++|++|++++ |+.++++...+++.    ..+.++.++.||+++.++++.++
T Consensus       647 ~m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv  726 (1878)
T 2uv9_A          647 GLTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALV  726 (1878)
T ss_dssp             CBCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHH
Confidence            34688999999999999 99999999999999999985 66666665555543    23667899999999999999999


Q ss_pred             HHHHHH---hC-CCCEEEEcCCCCCCCC-cccccc--HHHHHHHHHHHHHHHHHHHHH--HhhhhhcC--CEEEEEeccC
Q 027248           81 NQTIEK---FG-KIDVVVSNAAANPSVD-SILQTK--ESVLDKLWDINVKSSILLLQD--AAPHLQKG--SSVVLISSIA  149 (226)
Q Consensus        81 ~~~~~~---~~-~id~li~nag~~~~~~-~~~~~~--~~~~~~~~~~N~~~~~~~~~~--~~~~l~~~--~~iv~~sS~~  149 (226)
                      +++.+.   +| ++|+||||||+.. .. ++.+.+  .++|++++++|+.+++++++.  ++|.|.+.  ++||++||..
T Consensus       727 ~~i~~~~~~~G~~IDiLVnNAGi~~-~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~a  805 (1878)
T 2uv9_A          727 NYIYDTKNGLGWDLDYVVPFAAIPE-NGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNH  805 (1878)
T ss_dssp             HHHHCSSSSCCCCCSEEEECCCCCC-TTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCS
T ss_pred             HHHHHhhcccCCCCcEEEeCccccc-CCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchh
Confidence            999988   88 9999999999875 44 778888  899999999999999999987  67887543  6999999999


Q ss_pred             CcCCCCCCchhhHhHHHHHHHHHHHHHH-hCCCeEEEEEecCcee-CCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          150 GYQPQSSMAMYGVTKTALLGLTKALAAE-MAPDTRVNCVAPGFVP-THFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       150 ~~~~~~~~~~Y~~sKaa~~~~~~~la~e-~~~~i~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +..+  +...|++||+|+++|++.++.+ ++++|+||+|+||+++ |+|..............+. +..+|+|+|.++
T Consensus       806 g~~g--g~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m~~~~~~~~~~~~~~pl-r~~sPeEVA~av  880 (1878)
T 2uv9_A          806 GTFG--NDGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGLMSANNLVAEGVEKLGV-RTFSQQEMAFNL  880 (1878)
T ss_dssp             SSSS--CCSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTSCSHHHHTHHHHHTTTC-CCBCHHHHHHHH
T ss_pred             hccC--CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCcccccchhhHHHHHhcCC-CCCCHHHHHHHH
Confidence            8876  5778999999999998876554 6667999999999999 9986542111112222222 455899998764

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.98  E-value=7.8e-32  Score=235.26  Aligned_cols=179  Identities=22%  Similarity=0.199  Sum_probs=160.0

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCc---chHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQ---KNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      +|+++||||++|||++++++|+++|+ +|++++|+.   +..++..+++.+.+.++.++.||++|+++++.+++++.+. 
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~-  317 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPED-  317 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTT-
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHh-
Confidence            49999999999999999999999998 799999974   4567778888888889999999999999999999988776 


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHhHHHH
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~  167 (226)
                      +++|+||||||+.....++.+.+.++|++++++|+.|++++.+.+.+..  .++||++||.++..+.++...|+++|+++
T Consensus       318 g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~--~~~iV~~SS~a~~~g~~g~~~YaAaKa~l  395 (496)
T 3mje_A          318 APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLD--LDAFVLFSSGAAVWGSGGQPGYAAANAYL  395 (496)
T ss_dssp             SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSC--CSEEEEEEEHHHHTTCTTCHHHHHHHHHH
T ss_pred             CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccC--CCEEEEEeChHhcCCCCCcHHHHHHHHHH
Confidence            7899999999997336788999999999999999999999999988864  45999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCeEEEEEecCceeCCc
Q 027248          168 LGLTKALAAEMAPDTRVNCVAPGFVPTHF  196 (226)
Q Consensus       168 ~~~~~~la~e~~~~i~v~~v~Pg~v~t~~  196 (226)
                      ++|++.++..   ||++++|+||++.++.
T Consensus       396 dala~~~~~~---Gi~v~sV~pG~w~~~g  421 (496)
T 3mje_A          396 DALAEHRRSL---GLTASSVAWGTWGEVG  421 (496)
T ss_dssp             HHHHHHHHHT---TCCCEEEEECEESSSC
T ss_pred             HHHHHHHHhc---CCeEEEEECCcccCCc
Confidence            9998865533   8999999999886653

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.97  E-value=1.2e-31  Score=268.16  Aligned_cols=216  Identities=15%  Similarity=0.133  Sum_probs=166.5

Q ss_pred             ccccCCCEEEEEcCCCc-hhHHHHHHHHhCCCeEEEEecCcch-----HHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQG-IGFGIAERLGLEGASVVVSSRKQKN-----VDEAVVKLKARGIEVIGVVCHVSNGQQRKNLI   80 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~g-iG~a~~~~l~~~g~~v~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   80 (226)
                      ...++||++|||||++| ||+++++.|+++|++|++++|+.+.     +++..+++...+.++..+.+|++++++++.++
T Consensus      2131 ~~~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv 2210 (3089)
T 3zen_D         2131 XXXXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLV 2210 (3089)
T ss_dssp             TCCCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHH
T ss_pred             cccCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHH
Confidence            34589999999999999 9999999999999999999999877     66666676666778889999999999999999


Q ss_pred             HHHHH----HhCCCCEEEEcCCCC----CCCCccccccHHHH----HHHHHHHHHHHHHHHHHHhhhhhcCC------EE
Q 027248           81 NQTIE----KFGKIDVVVSNAAAN----PSVDSILQTKESVL----DKLWDINVKSSILLLQDAAPHLQKGS------SV  142 (226)
Q Consensus        81 ~~~~~----~~~~id~li~nag~~----~~~~~~~~~~~~~~----~~~~~~N~~~~~~~~~~~~~~l~~~~------~i  142 (226)
                      +++.+    .+|++|+||||||+.    .......+.+.++|    +..+++|+.+++.+++.+.|.|++.+      .|
T Consensus      2211 ~~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii 2290 (3089)
T 3zen_D         2211 EWVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVV 2290 (3089)
T ss_dssp             HHHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEE
T ss_pred             HHHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEE
Confidence            99998    899999999999972    11122223344444    44599999999999999999985431      23


Q ss_pred             EEEeccCCcCCCCCCchhhHhHHHHHHHHHHHHHH--hCCCeEEEEEecCcee-CCcccccccCchhhhhhccCCCCCch
Q 027248          143 VLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAE--MAPDTRVNCVAPGFVP-THFAEYITSNDGVVSSVSSLKLSPPS  219 (226)
Q Consensus       143 v~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e--~~~~i~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~p~  219 (226)
                      +..|+..+.  .++...|++||+|+++|+|+|+.|  ++++|+||+++||+|+ |++................ +...|+
T Consensus      2291 ~~~ss~~g~--~g~~~aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~PG~v~tT~l~~~~~~~~~~~~~~~~-r~~~Pe 2367 (3089)
T 3zen_D         2291 LPGSPNRGM--FGGDGAYGEAKSALDALENRWSAEKSWAERVSLAHALIGWTKGTGLMGQNDAIVSAVEEAGV-TTYTTD 2367 (3089)
T ss_dssp             EEECSSTTS--CSSCSSHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEECCCEECSTTTTTTTTTHHHHGGGSC-BCEEHH
T ss_pred             EECCccccc--CCCchHHHHHHHHHHHHHHHHHhccccCCCeEEEEEeecccCCCcccccchhHHHHHHhcCC-CCCCHH
Confidence            333433332  345678999999999999999999  7779999999999999 7765432222222222322 334899


Q ss_pred             hhhccc
Q 027248          220 SLTLAV  225 (226)
Q Consensus       220 ~~a~av  225 (226)
                      |+|.+|
T Consensus      2368 EIA~av 2373 (3089)
T 3zen_D         2368 EMAAML 2373 (3089)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999865

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.97  E-value=4.1e-32  Score=217.91  Aligned_cols=189  Identities=23%  Similarity=0.288  Sum_probs=154.8

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCE
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~   92 (226)
                      |+++||||+||||++++++|+++|++|++++|++++.+.             .+.+|++++++++++++++   .+++|+
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------------~~~~D~~~~~~~~~~~~~~---~~~~d~   65 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA-------------DLSTPGGRETAVAAVLDRC---GGVLDG   65 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------------CTTSHHHHHHHHHHHHHHH---TTCCSE
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc-------------cccCCcccHHHHHHHHHHc---CCCccE
Confidence            679999999999999999999999999999998865321             1567999999988887754   379999


Q ss_pred             EEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcC--CEEEEEeccCCcCCC----------------
Q 027248           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKG--SSVVLISSIAGYQPQ----------------  154 (226)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~--~~iv~~sS~~~~~~~----------------  154 (226)
                      ||||||....        .++|++.+++|+.+++++++++.+.|++.  ++||++||..+..+.                
T Consensus        66 vi~~Ag~~~~--------~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~  137 (255)
T 2dkn_A           66 LVCCAGVGVT--------AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEA  137 (255)
T ss_dssp             EEECCCCCTT--------SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHH
T ss_pred             EEECCCCCCc--------chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchh
Confidence            9999997541        12478999999999999999999998654  899999999887654                


Q ss_pred             ----------CCCchhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC---chhhhhh--ccCCCCCc
Q 027248          155 ----------SSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN---DGVVSSV--SSLKLSPP  218 (226)
Q Consensus       155 ----------~~~~~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~---~~~~~~~--~~~~~~~p  218 (226)
                                ++...|+.||++++.+++.++.|+.+ ||++++++||++.|++.......   ......+  +..++..|
T Consensus       138 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (255)
T 2dkn_A          138 RAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRYGESTRRFVAPLGRGSEP  217 (255)
T ss_dssp             HHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCTTTHHHHHSCCCTTSSCBCH
T ss_pred             hhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccchhhHHHHHHHHHHhcCCCCH
Confidence                      56778999999999999999999876 99999999999999987654222   1112222  44568899


Q ss_pred             hhhhccc
Q 027248          219 SSLTLAV  225 (226)
Q Consensus       219 ~~~a~av  225 (226)
                      +|+|+++
T Consensus       218 ~dva~~~  224 (255)
T 2dkn_A          218 REVAEAI  224 (255)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999864

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.97  E-value=1.2e-31  Score=246.16  Aligned_cols=178  Identities=22%  Similarity=0.270  Sum_probs=161.1

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHH-hCCC-eEEEEecC---cchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248           11 QGKVAIVTASTQGIGFGIAERLG-LEGA-SVVVSSRK---QKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~-~~g~-~v~~~~r~---~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      .+|+++||||++|||++++++|+ ++|+ +|++++|+   .+..++..+++...+.++.++.||++++++++++++++.+
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~  608 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPD  608 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            58999999999999999999999 7999 59999999   5667788888888899999999999999999999999887


Q ss_pred             HhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHhHH
Q 027248           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKT  165 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~sKa  165 (226)
                      .+ ++|+||||||+.. ...+.+.+.++|++++++|+.|++++.+++.|.|    +||++||.++..+.++++.|++||+
T Consensus       609 ~~-~id~lVnnAGv~~-~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l----~iV~~SS~ag~~g~~g~~~YaAaka  682 (795)
T 3slk_A          609 EH-PLTAVVHAAGVLD-DGVSESLTVERLDQVLRPKVDGARNLLELIDPDV----ALVLFSSVSGVLGSGGQGNYAAANS  682 (795)
T ss_dssp             TS-CEEEEEECCCCCC-CCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS----EEEEEEETHHHHTCSSCHHHHHHHH
T ss_pred             hC-CCEEEEECCCcCC-CCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC----EEEEEccHHhcCCCCCCHHHHHHHH
Confidence            76 9999999999986 5789999999999999999999999999998888    8999999999999999999999997


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCceeCCccc
Q 027248          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAE  198 (226)
Q Consensus       166 a~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~  198 (226)
                          |+++|+.++.+ ||++|+|+||+++|++..
T Consensus       683 ----~~~alA~~~~~~Gi~v~sI~pG~v~t~g~~  712 (795)
T 3slk_A          683 ----FLDALAQQRQSRGLPTRSLAWGPWAEHGMA  712 (795)
T ss_dssp             ----HHHHHHHHHHHTTCCEEEEEECCCSCCCHH
T ss_pred             ----HHHHHHHHHHHcCCeEEEEECCeECcchhh
Confidence                55555666655 999999999999987543

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.97  E-value=4.4e-29  Score=219.09  Aligned_cols=202  Identities=22%  Similarity=0.248  Sum_probs=168.1

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcc---hHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQK---NVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      .+|+++||||+||||++++++|+++|+ +|++++|+..   ..++..+++...+.++.++.||++|.++++++++.    
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~----  333 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTA----  333 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHH----
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhc----
Confidence            479999999999999999999999999 5999999864   45677777877788899999999999999988876    


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHhHHH
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa  166 (226)
                       +++|+||||||+.. ...+.+.+.++|++++++|+.|++++.+.+.+. .+.++||++||..+..+.++...|+++|++
T Consensus       334 -~~ld~VVh~AGv~~-~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~-~~~~~~V~~SS~a~~~g~~g~~~YaaaKa~  410 (511)
T 2z5l_A          334 -YPPNAVFHTAGILD-DAVIDTLSPESFETVRGAKVCGAELLHQLTADI-KGLDAFVLFSSVTGTWGNAGQGAYAAANAA  410 (511)
T ss_dssp             -SCCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSC-TTCCCEEEEEEGGGTTCCTTBHHHHHHHHH
T ss_pred             -CCCcEEEECCcccC-CcccccCCHHHHHHHHHHHHHHHHHHHHHHhhc-cCCCEEEEEeCHHhcCCCCCCHHHHHHHHH
Confidence             68999999999876 567888999999999999999999999887653 245789999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCeEEEEEecCce-eCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          167 LLGLTKALAAEMAPDTRVNCVAPGFV-PTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       167 ~~~~~~~la~e~~~~i~v~~v~Pg~v-~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ++.|++.++.   .|+++++|+||++ +|+|...... ..+.  .......+|+++++++
T Consensus       411 ld~la~~~~~---~gi~v~sv~pG~~~~tgm~~~~~~-~~~~--~~g~~~l~~e~~a~~l  464 (511)
T 2z5l_A          411 LDALAERRRA---AGLPATSVAWGLWGGGGMAAGAGE-ESLS--RRGLRAMDPDAAVDAL  464 (511)
T ss_dssp             HHHHHHHHHT---TTCCCEEEEECCBCSTTCCCCHHH-HHHH--HHTBCCBCHHHHHHHH
T ss_pred             HHHHHHHHHH---cCCcEEEEECCcccCCcccccccH-HHHH--hcCCCCCCHHHHHHHH
Confidence            9999987642   3899999999998 8888754311 1111  1123467888887754

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.97  E-value=1.6e-29  Score=220.88  Aligned_cols=205  Identities=21%  Similarity=0.205  Sum_probs=165.9

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCe-EEEEecCcc---hHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQK---NVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~-v~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      .+++++||||+||||++++++|+++|++ |++++|+..   ..++..+++...+.++.++.||++|.++++.+++.+ +.
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i-~~  303 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI-GD  303 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS-CT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHH-Hh
Confidence            4799999999999999999999999995 999999875   456777778777888999999999999999999988 55


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHhHHH
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa  166 (226)
                      ++++|+||||||+.. ...+.+.+.++|++++++|+.|++++.+++.+.  +.++||++||.++..+.++...|+++|++
T Consensus       304 ~g~ld~VIh~AG~~~-~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~--~~~~~V~~SS~a~~~g~~g~~~Yaaaka~  380 (486)
T 2fr1_A          304 DVPLSAVFHAAATLD-DGTVDTLTGERIERASRAKVLGARNLHELTREL--DLTAFVLFSSFASAFGAPGLGGYAPGNAY  380 (486)
T ss_dssp             TSCEEEEEECCCCCC-CCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS--CCSEEEEEEEHHHHTCCTTCTTTHHHHHH
T ss_pred             cCCCcEEEECCccCC-CCccccCCHHHHHHHHHHHHHHHHHHHHHhCcC--CCCEEEEEcChHhcCCCCCCHHHHHHHHH
Confidence            689999999999876 577888999999999999999999999988764  45799999999998899999999999999


Q ss_pred             HHHHHHHHHHHhCCCeEEEEEecCceeCC-cccccccCchhhhhhccCCCCCchhhhccc
Q 027248          167 LLGLTKALAAEMAPDTRVNCVAPGFVPTH-FAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       167 ~~~~~~~la~e~~~~i~v~~v~Pg~v~t~-~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ++.|++.++..   |+++++|+||++.++ |...... ..+.+  .....++|+++++++
T Consensus       381 l~~la~~~~~~---gi~v~~i~pG~~~~~gm~~~~~~-~~~~~--~g~~~i~~e~~a~~l  434 (486)
T 2fr1_A          381 LDGLAQQRRSD---GLPATAVAWGTWAGSGMAEGPVA-DRFRR--HGVIEMPPETACRAL  434 (486)
T ss_dssp             HHHHHHHHHHT---TCCCEEEEECCBC-------------CTT--TTEECBCHHHHHHHH
T ss_pred             HHHHHHHHHhc---CCeEEEEECCeeCCCcccchhHH-HHHHh--cCCCCCCHHHHHHHH
Confidence            99987765432   899999999999876 5432211 11110  112357888877654

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.95  E-value=4e-28  Score=196.79  Aligned_cols=156  Identities=18%  Similarity=0.195  Sum_probs=132.1

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id   91 (226)
                      +|+++||||+||||++++++|+++|++|++++|++.+..         +.++.++.+|++++++++++++       ++|
T Consensus         3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~-------~~D   66 (267)
T 3rft_A            3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA---------GPNEECVQCDLADANAVNAMVA-------GCD   66 (267)
T ss_dssp             EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC---------CTTEEEEECCTTCHHHHHHHHT-------TCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc---------CCCCEEEEcCCCCHHHHHHHHc-------CCC
Confidence            589999999999999999999999999999999986543         4578899999999999888776       799


Q ss_pred             EEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCc------------CCCCCCch
Q 027248           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY------------QPQSSMAM  159 (226)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~------------~~~~~~~~  159 (226)
                      +||||||...         .++|++++++|+.|++++++++...  +.++||++||..++            .+.++...
T Consensus        67 ~vi~~Ag~~~---------~~~~~~~~~~N~~g~~~l~~a~~~~--~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~~  135 (267)
T 3rft_A           67 GIVHLGGISV---------EKPFEQILQGNIIGLYNLYEAARAH--GQPRIVFASSNHTIGYYPQTERLGPDVPARPDGL  135 (267)
T ss_dssp             EEEECCSCCS---------CCCHHHHHHHHTHHHHHHHHHHHHT--TCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCSH
T ss_pred             EEEECCCCcC---------cCCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcchHHhCCCCCCCCCCCCCCCCCCCh
Confidence            9999999842         2457899999999999999999653  34799999998876            34456788


Q ss_pred             hhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCc
Q 027248          160 YGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHF  196 (226)
Q Consensus       160 Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~  196 (226)
                      |+.||++++.+++.++.++  +++++.|.||.+.+++
T Consensus       136 Y~~sK~~~e~~~~~~a~~~--g~~~~~vr~~~v~~~~  170 (267)
T 3rft_A          136 YGVSKCFGENLARMYFDKF--GQETALVRIGSCTPEP  170 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHH--CCCEEEEEECBCSSSC
T ss_pred             HHHHHHHHHHHHHHHHHHh--CCeEEEEEeecccCCC
Confidence            9999999999999999887  5667777777666653

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.94  E-value=8.6e-27  Score=185.38  Aligned_cols=184  Identities=20%  Similarity=0.177  Sum_probs=140.6

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcE-EEEEeeCCCHHHHHHHHHHHHHH
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV-IGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      .+++||+++||||+|+||++++++|+++|++|++++|++++.+....    .  .+ .++.+|++         +.+.+.
T Consensus        17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~----~--~~~~~~~~Dl~---------~~~~~~   81 (236)
T 3e8x_A           17 LYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE----R--GASDIVVANLE---------EDFSHA   81 (236)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----T--TCSEEEECCTT---------SCCGGG
T ss_pred             cCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh----C--CCceEEEcccH---------HHHHHH
Confidence            45789999999999999999999999999999999999987665432    1  46 78899999         233445


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCC---CCCchhhHh
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQ---SSMAMYGVT  163 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~---~~~~~Y~~s  163 (226)
                      ++.+|+||||||...         .+++++.+++|+.+++++++++...  +.++||++||..+..+.   +....|+.+
T Consensus        82 ~~~~D~vi~~ag~~~---------~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~iv~~SS~~~~~~~~~~~~~~~Y~~s  150 (236)
T 3e8x_A           82 FASIDAVVFAAGSGP---------HTGADKTILIDLWGAIKTIQEAEKR--GIKRFIMVSSVGTVDPDQGPMNMRHYLVA  150 (236)
T ss_dssp             GTTCSEEEECCCCCT---------TSCHHHHHHTTTHHHHHHHHHHHHH--TCCEEEEECCTTCSCGGGSCGGGHHHHHH
T ss_pred             HcCCCEEEECCCCCC---------CCCccccchhhHHHHHHHHHHHHHc--CCCEEEEEecCCCCCCCCChhhhhhHHHH
Confidence            669999999999754         1457899999999999999999653  34699999998776554   467899999


Q ss_pred             HHHHHHHHHHHHHHhCCCeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          164 KTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       164 Kaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      |++++.+.+      ..+|+++.++||++.++..........  ..-....+..++|+|+++
T Consensus       151 K~~~e~~~~------~~gi~~~~lrpg~v~~~~~~~~~~~~~--~~~~~~~~i~~~Dva~~~  204 (236)
T 3e8x_A          151 KRLADDELK------RSSLDYTIVRPGPLSNEESTGKVTVSP--HFSEITRSITRHDVAKVI  204 (236)
T ss_dssp             HHHHHHHHH------HSSSEEEEEEECSEECSCCCSEEEEES--SCSCCCCCEEHHHHHHHH
T ss_pred             HHHHHHHHH------HCCCCEEEEeCCcccCCCCCCeEEecc--CCCcccCcEeHHHHHHHH
Confidence            999999876      238999999999999986543221111  001134577788888764

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.94  E-value=1.1e-27  Score=191.04  Aligned_cols=189  Identities=16%  Similarity=0.096  Sum_probs=142.4

Q ss_pred             cccccCCCEEEEEcCCCchhHHHHHHHHhCCC--eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHH
Q 027248            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQT   83 (226)
Q Consensus         6 ~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   83 (226)
                      ++..+++|+++||||+|+||++++++|+++|+  +|++++|++++.+...      ...+.++.+|++++++++++++  
T Consensus        12 ~~~~m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~------~~~~~~~~~D~~d~~~~~~~~~--   83 (242)
T 2bka_A           12 EDFRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA------YKNVNQEVVDFEKLDDYASAFQ--   83 (242)
T ss_dssp             HHHHHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG------GGGCEEEECCGGGGGGGGGGGS--
T ss_pred             hhhhhcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc------cCCceEEecCcCCHHHHHHHhc--
Confidence            33446789999999999999999999999999  9999999987543221      1246788999999988776654  


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHh
Q 027248           84 IEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVT  163 (226)
Q Consensus        84 ~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~s  163 (226)
                           ++|+||||||...        ..+++++.+++|+.+++++++++...  ..++||++||..+..  ++...|+.+
T Consensus        84 -----~~d~vi~~ag~~~--------~~~~~~~~~~~n~~~~~~~~~~~~~~--~~~~iv~~SS~~~~~--~~~~~Y~~s  146 (242)
T 2bka_A           84 -----GHDVGFCCLGTTR--------GKAGAEGFVRVDRDYVLKSAELAKAG--GCKHFNLLSSKGADK--SSNFLYLQV  146 (242)
T ss_dssp             -----SCSEEEECCCCCH--------HHHHHHHHHHHHTHHHHHHHHHHHHT--TCCEEEEECCTTCCT--TCSSHHHHH
T ss_pred             -----CCCEEEECCCccc--------ccCCcccceeeeHHHHHHHHHHHHHC--CCCEEEEEccCcCCC--CCcchHHHH
Confidence                 7999999999642        12457889999999999999887653  246999999998764  345689999


Q ss_pred             HHHHHHHHHHHHHHhCCCe-EEEEEecCceeCCcccccccCc---hhhhhhc----cCCCCCchhhhccc
Q 027248          164 KTALLGLTKALAAEMAPDT-RVNCVAPGFVPTHFAEYITSND---GVVSSVS----SLKLSPPSSLTLAV  225 (226)
Q Consensus       164 Kaa~~~~~~~la~e~~~~i-~v~~v~Pg~v~t~~~~~~~~~~---~~~~~~~----~~~~~~p~~~a~av  225 (226)
                      |++++.+++.+      ++ ++++|+||++.|++........   ......+    ..++..|+|+|+++
T Consensus       147 K~~~e~~~~~~------~~~~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  210 (242)
T 2bka_A          147 KGEVEAKVEEL------KFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAM  210 (242)
T ss_dssp             HHHHHHHHHTT------CCSEEEEEECCEEECTTGGGSHHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHH
T ss_pred             HHHHHHHHHhc------CCCCeEEEcCceecCCCCCCcHHHHHHHHhhcccCccccCCcccCHHHHHHHH
Confidence            99999998754      45 7999999999999643211110   0111111    34567888988764

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.93  E-value=7.1e-26  Score=226.88  Aligned_cols=177  Identities=18%  Similarity=0.211  Sum_probs=142.0

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCe-EEEEecCcchH---HHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQKNV---DEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~-v~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      .+|+++||||++|||+++++.|+++|++ |++++|+..+.   ....+++...+.++.++.||+++.++++++++++. .
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~-~ 1961 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEAT-Q 1961 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHH-H
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHH-h
Confidence            6899999999999999999999999997 88999987654   34455666667789999999999999999999986 4


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHhHHH
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa  166 (226)
                      ++++|+||||||+.. ..++.+.+.++|++++++|+.|++++.+++.+.+.+.++||++||.++..+.++...|++||++
T Consensus      1962 ~g~id~lVnnAgv~~-~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~~g~~~Y~aaKaa 2040 (2512)
T 2vz8_A         1962 LGPVGGVFNLAMVLR-DAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGNAGQANYGFANSA 2040 (2512)
T ss_dssp             HSCEEEEEECCCC-----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTCTTCHHHHHHHHH
T ss_pred             cCCCcEEEECCCcCC-CCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCCCCcHHHHHHHHH
Confidence            799999999999875 5778899999999999999999999999999988777899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCeEEEEEecCce
Q 027248          167 LLGLTKALAAEMAPDTRVNCVAPGFV  192 (226)
Q Consensus       167 ~~~~~~~la~e~~~~i~v~~v~Pg~v  192 (226)
                      +++|++.++.+   |+...++..|.+
T Consensus      2041 l~~l~~~rr~~---Gl~~~a~~~g~~ 2063 (2512)
T 2vz8_A         2041 MERICEKRRHD---GLPGLAVQWGAI 2063 (2512)
T ss_dssp             HHHHHHHHHHT---TSCCCEEEECCB
T ss_pred             HHHHHHHHHHC---CCcEEEEEccCc
Confidence            99999987776   555556666543

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.93  E-value=5.9e-25  Score=183.62  Aligned_cols=192  Identities=15%  Similarity=0.066  Sum_probs=158.2

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHH-hCCCeEEEEecCcch------------HHHHHHHHHhcCCcEEEEEeeCCCHHH
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLG-LEGASVVVSSRKQKN------------VDEAVVKLKARGIEVIGVVCHVSNGQQ   75 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~-~~g~~v~~~~r~~~~------------~~~~~~~~~~~~~~~~~~~~Dv~~~~~   75 (226)
                      ...+|++|||||++|||+|++..|+ +.|+.++++.+..+.            .....+++.+.|.+...+.||+++++.
T Consensus        47 ~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~  126 (401)
T 4ggo_A           47 AKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEI  126 (401)
T ss_dssp             SCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHH
T ss_pred             cCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHH
Confidence            3568999999999999999999998 689999999887543            234556677779999999999999999


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCCCC------------Cc---------------------cccccH---HHHHHHHH
Q 027248           76 RKNLINQTIEKFGKIDVVVSNAAANPSV------------DS---------------------ILQTKE---SVLDKLWD  119 (226)
Q Consensus        76 v~~~~~~~~~~~~~id~li~nag~~~~~------------~~---------------------~~~~~~---~~~~~~~~  119 (226)
                      ++++++++.+.+|++|+||||+|.....            ++                     +...+.   +.+..+|.
T Consensus       127 i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vMg  206 (401)
T 4ggo_A          127 KAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVMG  206 (401)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHHHh
Confidence            9999999999999999999999976311            11                     111233   45566777


Q ss_pred             HHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCC--CchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCcc
Q 027248          120 INVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSS--MAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFA  197 (226)
Q Consensus       120 ~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~--~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~  197 (226)
                      ...++.+...+...++|.++++++.+|+..+...+|.  .+.++++|++|+..++.|+.|+++ ++++.+.||.+.|.-.
T Consensus       207 ~s~~s~w~~al~~a~lla~G~siva~SYiGse~t~P~Y~~G~mG~AKaaLEa~~r~La~eL~~-~~a~v~v~~a~vT~As  285 (401)
T 4ggo_A          207 GEDWERWIKQLSKEGLLEEGCITLAYSYIGPEATQALYRKGTIGKAKEHLEATAHRLNKENPS-IRAFVSVNKGLVTRAS  285 (401)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGHHHHTTSHHHHHHHHHHHHHHHHHHHCTT-EEEEEEECCCCCCTTG
T ss_pred             hhHHHHHHHHHHhhhcccCCceEEEEeccCcceeecCCCccHHHHHHHHHHHHHHHHHHhcCC-CcEEEEEcCccccchh
Confidence            7888888889999999999999999999988655554  458999999999999999999975 8999999999999865


Q ss_pred             cccc
Q 027248          198 EYIT  201 (226)
Q Consensus       198 ~~~~  201 (226)
                      ..+.
T Consensus       286 saIP  289 (401)
T 4ggo_A          286 AVIP  289 (401)
T ss_dssp             GGSS
T ss_pred             hcCC
Confidence            4443

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.93  E-value=3.8e-25  Score=184.56  Aligned_cols=175  Identities=15%  Similarity=0.032  Sum_probs=138.8

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHH-HHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDE-AVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      +||+++||||+|+||++++++|+++|++|++++|++++.+. ..+++. ...++.++.+|++++++++++++..     +
T Consensus         2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~-----~   75 (345)
T 2z1m_A            2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELG-IENDVKIIHMDLLEFSNIIRTIEKV-----Q   75 (345)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTT-CTTTEEECCCCTTCHHHHHHHHHHH-----C
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhcc-ccCceeEEECCCCCHHHHHHHHHhc-----C
Confidence            47899999999999999999999999999999998765432 112211 1246788899999999998888765     7


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCc-----------CCCCCCc
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY-----------QPQSSMA  158 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~-----------~~~~~~~  158 (226)
                      +|+|||+||...     .+.+.+++++.+++|+.+++++++++... ...++||++||.+.+           .+.++..
T Consensus        76 ~d~vih~A~~~~-----~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~~  149 (345)
T 2z1m_A           76 PDEVYNLAAQSF-----VGVSFEQPILTAEVDAIGVLRILEALRTV-KPDTKFYQASTSEMFGKVQEIPQTEKTPFYPRS  149 (345)
T ss_dssp             CSEEEECCCCCC-----HHHHTTSHHHHHHHHTHHHHHHHHHHHHH-CTTCEEEEEEEGGGGCSCSSSSBCTTSCCCCCS
T ss_pred             CCEEEECCCCcc-----hhhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEEechhhcCCCCCCCCCccCCCCCCC
Confidence            999999999753     12334568899999999999999999863 213799999998643           2345577


Q ss_pred             hhhHhHHHHHHHHHHHHHHhC---C-CeEEEEEecCceeCCcc
Q 027248          159 MYGVTKTALLGLTKALAAEMA---P-DTRVNCVAPGFVPTHFA  197 (226)
Q Consensus       159 ~Y~~sKaa~~~~~~~la~e~~---~-~i~v~~v~Pg~v~t~~~  197 (226)
                      .|+.||++.+.+++.++.++.   . .+.++.+.||...|++.
T Consensus       150 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~  192 (345)
T 2z1m_A          150 PYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVT  192 (345)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHH
T ss_pred             hhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchh
Confidence            899999999999999999975   3 56778889998887753

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.93  E-value=1.7e-24  Score=181.66  Aligned_cols=170  Identities=16%  Similarity=0.153  Sum_probs=142.5

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhC-CC-eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLE-GA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~-g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      ..+++|+++||||+|+||++++++|+++ |+ +|++++|++.+.+...+++.  ...+.++.+|++|.++++++++    
T Consensus        17 ~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~v~~~~~Dl~d~~~l~~~~~----   90 (344)
T 2gn4_A           17 NMLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN--DPRMRFFIGDVRDLERLNYALE----   90 (344)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC--CTTEEEEECCTTCHHHHHHHTT----
T ss_pred             HhhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc--CCCEEEEECCCCCHHHHHHHHh----
Confidence            3467899999999999999999999999 97 99999999877766665553  3468889999999998877664    


Q ss_pred             HhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHhHH
Q 027248           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKT  165 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~sKa  165 (226)
                         .+|+|||+||...  .+   ....+..+.+++|+.|+.++++++.+.-  .+++|++||..+..+   ...|+.||+
T Consensus        91 ---~~D~Vih~Aa~~~--~~---~~~~~~~~~~~~Nv~gt~~l~~aa~~~~--v~~~V~~SS~~~~~p---~~~Y~~sK~  157 (344)
T 2gn4_A           91 ---GVDICIHAAALKH--VP---IAEYNPLECIKTNIMGASNVINACLKNA--ISQVIALSTDKAANP---INLYGATKL  157 (344)
T ss_dssp             ---TCSEEEECCCCCC--HH---HHHHSHHHHHHHHHHHHHHHHHHHHHTT--CSEEEEECCGGGSSC---CSHHHHHHH
T ss_pred             ---cCCEEEECCCCCC--CC---chhcCHHHHHHHHHHHHHHHHHHHHhCC--CCEEEEecCCccCCC---ccHHHHHHH
Confidence               7999999999753  11   1233457899999999999999998863  359999999876543   578999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCceeCCc
Q 027248          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHF  196 (226)
Q Consensus       166 a~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~  196 (226)
                      +++.+++.++.++.+ +++++++.||.+.++.
T Consensus       158 ~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~  189 (344)
T 2gn4_A          158 CSDKLFVSANNFKGSSQTQFSVVRYGNVVGSR  189 (344)
T ss_dssp             HHHHHHHHGGGCCCSSCCEEEEECCCEETTCT
T ss_pred             HHHHHHHHHHHHhCCCCcEEEEEEeccEECCC
Confidence            999999999998877 9999999999999864

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.92  E-value=1.1e-24  Score=181.64  Aligned_cols=179  Identities=18%  Similarity=0.153  Sum_probs=144.3

Q ss_pred             cccccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhc-CCcEEEE-EeeCCCHHHHHHHHH
Q 027248            4 MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGV-VCHVSNGQQRKNLIN   81 (226)
Q Consensus         4 ~~~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~-~~Dv~~~~~v~~~~~   81 (226)
                      ..|...+++|+++||||+|+||++++++|+++|++|++++|+.++.+...+.+... +.++.++ .+|+++.++++++++
T Consensus         3 ~~~~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~   82 (342)
T 1y1p_A            3 IDNAVLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK   82 (342)
T ss_dssp             STTCSSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT
T ss_pred             CCcccCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHc
Confidence            34556678999999999999999999999999999999999987766555544332 3467777 799999988776654


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcC-CC------
Q 027248           82 QTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ-PQ------  154 (226)
Q Consensus        82 ~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~-~~------  154 (226)
                             .+|+|||+||.... .       +++++.+++|+.++.++++++.+. ...++||++||..++. +.      
T Consensus        83 -------~~d~vih~A~~~~~-~-------~~~~~~~~~n~~g~~~ll~~~~~~-~~~~~iv~~SS~~~~~~~~~~~~~~  146 (342)
T 1y1p_A           83 -------GAAGVAHIASVVSF-S-------NKYDEVVTPAIGGTLNALRAAAAT-PSVKRFVLTSSTVSALIPKPNVEGI  146 (342)
T ss_dssp             -------TCSEEEECCCCCSC-C-------SCHHHHHHHHHHHHHHHHHHHHTC-TTCCEEEEECCGGGTCCCCTTCCCC
T ss_pred             -------CCCEEEEeCCCCCC-C-------CCHHHHHHHHHHHHHHHHHHHHhC-CCCcEEEEeccHHHhcCCCCCCCCc
Confidence                   79999999997542 1       245789999999999999999863 1246999999987652 21      


Q ss_pred             ------------------------CCCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCccc
Q 027248          155 ------------------------SSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAE  198 (226)
Q Consensus       155 ------------------------~~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~~  198 (226)
                                              .+...|+.||++.+.+++.++.++.++++++.+.||.+.++...
T Consensus       147 ~~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~  214 (342)
T 1y1p_A          147 YLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFD  214 (342)
T ss_dssp             EECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSC
T ss_pred             ccCccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCC
Confidence                                    12367999999999999999999877999999999999998754

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.92  E-value=3.7e-24  Score=179.83  Aligned_cols=177  Identities=20%  Similarity=0.103  Sum_probs=144.4

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      .+++++++||||+|+||++++++|+++|++|++++|+.++.+.....+. ...++.++.+|++++++++++++..     
T Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~-----   79 (357)
T 1rkx_A            6 FWQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR-VADGMQSEIGDIRDQNKLLESIREF-----   79 (357)
T ss_dssp             HHTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT-TTTTSEEEECCTTCHHHHHHHHHHH-----
T ss_pred             hhCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc-cCCceEEEEccccCHHHHHHHHHhc-----
Confidence            3578999999999999999999999999999999998876544443332 2346788999999999988888755     


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcC------------CCCC
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ------------PQSS  156 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~------------~~~~  156 (226)
                      ++|+|||+||...     .+.+.+++++.+++|+.++.++++++.+. .+.++||++||...+.            +..+
T Consensus        80 ~~d~vih~A~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~  153 (357)
T 1rkx_A           80 QPEIVFHMAAQPL-----VRLSYSEPVETYSTNVMGTVYLLEAIRHV-GGVKAVVNITSDKCYDNKEWIWGYRENEAMGG  153 (357)
T ss_dssp             CCSEEEECCSCCC-----HHHHHHCHHHHHHHHTHHHHHHHHHHHHH-CCCCEEEEECCGGGBCCCCSSSCBCTTSCBCC
T ss_pred             CCCEEEECCCCcc-----cccchhCHHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEecCHHHhCCCCcCCCCCCCCCCCC
Confidence            7999999999632     12345678899999999999999999874 2246999999986431            2345


Q ss_pred             CchhhHhHHHHHHHHHHHHHHhC------C-CeEEEEEecCceeCCcc
Q 027248          157 MAMYGVTKTALLGLTKALAAEMA------P-DTRVNCVAPGFVPTHFA  197 (226)
Q Consensus       157 ~~~Y~~sKaa~~~~~~~la~e~~------~-~i~v~~v~Pg~v~t~~~  197 (226)
                      ...|+.||++.+.+++.++.++.      + +++++.+.||.+.+|..
T Consensus       154 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~  201 (357)
T 1rkx_A          154 YDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGD  201 (357)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTC
T ss_pred             CCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCC
Confidence            67899999999999999999984      3 99999999999998753

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.92  E-value=2.2e-23  Score=174.11  Aligned_cols=172  Identities=15%  Similarity=0.050  Sum_probs=139.3

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCc-chHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCC
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ-KNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id   91 (226)
                      |+++||||+|+||++++++|+++|++|++++|+. .......+.+.. ..++.++.+|++++++++++++..     ++|
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~-~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d   75 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS-LGNFEFVHGDIRNKNDVTRLITKY-----MPD   75 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT-TCCCEEEECCTTCHHHHHHHHHHH-----CCS
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhcc-CCceEEEEcCCCCHHHHHHHHhcc-----CCC
Confidence            5699999999999999999999999999999864 333333344433 345788899999999988887752     799


Q ss_pred             EEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcC-------------------
Q 027248           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ-------------------  152 (226)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~-------------------  152 (226)
                      +|||+||...     .+.+.+++++.+++|+.++.++++++.+... .++||++||.+.+.                   
T Consensus        76 ~vih~A~~~~-----~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~  149 (347)
T 1orr_A           76 SCFHLAGQVA-----MTTSIDNPCMDFEINVGGTLNLLEAVRQYNS-NCNIIYSSTNKVYGDLEQYKYNETETRYTCVDK  149 (347)
T ss_dssp             EEEECCCCCC-----HHHHHHCHHHHHHHHHHHHHHHHHHHHHHCT-TCEEEEEEEGGGGTTCTTSCEEECSSCEEETTC
T ss_pred             EEEECCcccC-----hhhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-CceEEEeccHHHhCCCCcCCccccccccccccc
Confidence            9999999743     1234567889999999999999999998753 26999999986542                   


Q ss_pred             --------CCCCCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCccc
Q 027248          153 --------PQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAE  198 (226)
Q Consensus       153 --------~~~~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~~  198 (226)
                              +.++...|+.||++.+.+++.++.++  +++++.+.||++.++...
T Consensus       150 ~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--gi~~~ilrp~~v~g~~~~  201 (347)
T 1orr_A          150 PNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF--GLNTVVFRHSSMYGGRQF  201 (347)
T ss_dssp             TTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH--CCEEEEEEECCEECTTCC
T ss_pred             ccCccccCCCCCCCchHHHHHHHHHHHHHHHHHh--CCcEEEEccCceeCcCCC
Confidence                    22356789999999999999999887  799999999999998643

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.92  E-value=4.6e-24  Score=176.60  Aligned_cols=170  Identities=16%  Similarity=0.113  Sum_probs=136.5

Q ss_pred             cccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus         6 ~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      .+...+-++++||||+|+||++++++|+++|++|++++|+... +.    +     .+.++.+|++++++++++++.   
T Consensus         6 ~~~~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l-----~~~~~~~Dl~d~~~~~~~~~~---   72 (321)
T 2pk3_A            6 HHHHHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P-----NVEMISLDIMDSQRVKKVISD---   72 (321)
T ss_dssp             -------CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T-----TEEEEECCTTCHHHHHHHHHH---
T ss_pred             cccccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c-----eeeEEECCCCCHHHHHHHHHh---
Confidence            3445567899999999999999999999999999999998765 21    1     577889999999998888775   


Q ss_pred             HhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCC------------
Q 027248           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP------------  153 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~------------  153 (226)
                        +++|+|||+||....     ..+.+++++.+++|+.++.++++++ +.+.+.++||++||.+.+..            
T Consensus        73 --~~~d~vih~A~~~~~-----~~~~~~~~~~~~~Nv~g~~~l~~a~-~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~  144 (321)
T 2pk3_A           73 --IKPDYIFHLAAKSSV-----KDSWLNKKGTFSTNVFGTLHVLDAV-RDSNLDCRILTIGSSEEYGMILPEESPVSEEN  144 (321)
T ss_dssp             --HCCSEEEECCSCCCH-----HHHTTCHHHHHHHHHHHHHHHHHHH-HHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTS
T ss_pred             --cCCCEEEEcCcccch-----hhhhhcHHHHHHHHHHHHHHHHHHH-HHhCCCCeEEEEccHHhcCCCCCCCCCCCCCC
Confidence              379999999997531     1233467899999999999999999 55544579999999976533            


Q ss_pred             -CCCCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCccc
Q 027248          154 -QSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAE  198 (226)
Q Consensus       154 -~~~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~~  198 (226)
                       .++...|+.||++.+.+++.++.++  |++++.+.||.+.+|...
T Consensus       145 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--gi~~~ilrp~~v~g~~~~  188 (321)
T 2pk3_A          145 QLRPMSPYGVSKASVGMLARQYVKAY--GMDIIHTRTFNHIGPGQS  188 (321)
T ss_dssp             CCBCCSHHHHHHHHHHHHHHHHHHHH--CCEEEEEEECEEECTTCC
T ss_pred             CCCCCCccHHHHHHHHHHHHHHHHHc--CCCEEEEEeCcccCcCCC
Confidence             2457789999999999999999886  899999999999988653

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.92  E-value=3.5e-24  Score=168.67  Aligned_cols=169  Identities=8%  Similarity=0.016  Sum_probs=127.3

Q ss_pred             CEEEEEcCCCchhHHHHHHHH-hCCCeEEEEecCcc-hHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           13 KVAIVTASTQGIGFGIAERLG-LEGASVVVSSRKQK-NVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~-~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      |+++||||+|+||++++++|+ ++|++|++++|+++ +++...    .....+.++.+|++++++++++++       .+
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----IDHERVTVIEGSFQNPGXLEQAVT-------NA   74 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----HTSTTEEEEECCTTCHHHHHHHHT-------TC
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----cCCCceEEEECCCCCHHHHHHHHc-------CC
Confidence            789999999999999999999 89999999999977 554432    345678899999999999888775       78


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCc----------
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMA----------  158 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~----------  158 (226)
                      |+||||||..                    |+.     ++.+++.+++  .++||++||..+..+.+...          
T Consensus        75 d~vv~~ag~~--------------------n~~-----~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~~~~~~~~  129 (221)
T 3r6d_A           75 EVVFVGAMES--------------------GSD-----MASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFDNLPI  129 (221)
T ss_dssp             SEEEESCCCC--------------------HHH-----HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHHHHHTSCH
T ss_pred             CEEEEcCCCC--------------------Chh-----HHHHHHHHHhcCCCeEEEEeeceecCCCCccccccccccccc
Confidence            9999999852                    222     5666666654  36999999999877655444          


Q ss_pred             hhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCC-cccccccCchhhhhhccCCCCCchhhhccc
Q 027248          159 MYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTH-FAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       159 ~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~-~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      .|+.+|.+++.+.+.      .+|+++.|+||++.++ ....+....  ..........+|+|+|+++
T Consensus       130 ~y~~~K~~~e~~~~~------~~i~~~~vrpg~v~~~~~~~~~~~~~--~~~~~~~~~~~~~dvA~~~  189 (221)
T 3r6d_A          130 SYVQGERQARNVLRE------SNLNYTILRLTWLYNDPEXTDYELIP--EGAQFNDAQVSREAVVKAI  189 (221)
T ss_dssp             HHHHHHHHHHHHHHH------SCSEEEEEEECEEECCTTCCCCEEEC--TTSCCCCCEEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHh------CCCCEEEEechhhcCCCCCcceeecc--CCccCCCceeeHHHHHHHH
Confidence            899999999988763      4899999999999887 322221100  0111122367788888764

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.91  E-value=3.3e-23  Score=172.85  Aligned_cols=173  Identities=20%  Similarity=0.147  Sum_probs=139.9

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhc-CCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      .+++++||||+|+||++++++|+++|++|++++|+.+......+++... +..+.++.+|+++++++++++++     ++
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~   78 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA-----HP   78 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH-----SC
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc-----cC
Confidence            4589999999999999999999999999999999887766666555433 45688899999999999888875     48


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcC-----------CCCCCc
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ-----------PQSSMA  158 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~-----------~~~~~~  158 (226)
                      +|+||||||... .    ....++..+.+++|+.+++++++++...  ..++||++||.+.+.           +..+..
T Consensus        79 ~d~vih~A~~~~-~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~  151 (341)
T 3enk_A           79 ITAAIHFAALKA-V----GESVAKPIEYYRNNLDSLLSLLRVMRER--AVKRIVFSSSATVYGVPERSPIDETFPLSATN  151 (341)
T ss_dssp             CCEEEECCCCCC-H----HHHHHCHHHHHHHHHHHHHHHHHHHHHT--TCCEEEEEEEGGGBCSCSSSSBCTTSCCBCSS
T ss_pred             CcEEEECccccc-c----CccccChHHHHHHHHHHHHHHHHHHHhC--CCCEEEEEecceEecCCCCCCCCCCCCCCCCC
Confidence            999999999754 1    1233445678899999999998877553  246999999977652           223457


Q ss_pred             hhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCc
Q 027248          159 MYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHF  196 (226)
Q Consensus       159 ~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~  196 (226)
                      .|+.||++.+.+++.++.++. +++++.+.|+.+..|.
T Consensus       152 ~Y~~sK~~~e~~~~~~~~~~~-~~~~~~lRp~~v~G~~  188 (341)
T 3enk_A          152 PYGQTKLMAEQILRDVEAADP-SWRVATLRYFNPVGAH  188 (341)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCT-TCEEEEEEECEEECCC
T ss_pred             hhHHHHHHHHHHHHHHhhcCC-CceEEEEeeccccCCc
Confidence            899999999999999998863 6999999999988764

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.91  E-value=1.9e-24  Score=180.05  Aligned_cols=169  Identities=17%  Similarity=0.153  Sum_probs=131.9

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      ..++++++++||||+|+||++++++|+++|++|++++|+........+++    .++.++.+|+++.++++++++++   
T Consensus        15 ~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l----~~v~~~~~Dl~d~~~~~~~~~~~---   87 (330)
T 2pzm_A           15 VPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPV----AGLSVIEGSVTDAGLLERAFDSF---   87 (330)
T ss_dssp             CSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSC----TTEEEEECCTTCHHHHHHHHHHH---
T ss_pred             cccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhcc----CCceEEEeeCCCHHHHHHHHhhc---
Confidence            45678999999999999999999999999999999999765432111111    35788999999999998888765   


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCC-----C------
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQ-----S------  155 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~-----~------  155 (226)
                        ++|+||||||.... .     +.++++  +++|+.+++++++++...  ..++||++||.+.+...     +      
T Consensus        88 --~~D~vih~A~~~~~-~-----~~~~~~--~~~N~~~~~~l~~a~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~E~~~  155 (330)
T 2pzm_A           88 --KPTHVVHSAAAYKD-P-----DDWAED--AATNVQGSINVAKAASKA--GVKRLLNFQTALCYGRPATVPIPIDSPTA  155 (330)
T ss_dssp             --CCSEEEECCCCCSC-T-----TCHHHH--HHHHTHHHHHHHHHHHHH--TCSEEEEEEEGGGGCSCSSSSBCTTCCCC
T ss_pred             --CCCEEEECCccCCC-c-----cccChh--HHHHHHHHHHHHHHHHHc--CCCEEEEecCHHHhCCCccCCCCcCCCCC
Confidence              89999999997642 1     345555  999999999999999853  34699999999776443     2      


Q ss_pred             CCchhhHhHHHHHHHHHHHHHHhCC-CeE-EEEEecCceeCCcc
Q 027248          156 SMAMYGVTKTALLGLTKALAAEMAP-DTR-VNCVAPGFVPTHFA  197 (226)
Q Consensus       156 ~~~~Y~~sKaa~~~~~~~la~e~~~-~i~-v~~v~Pg~v~t~~~  197 (226)
                      +...|+.||++++.+++.+  ++.. .|| ++.+.||. .|++.
T Consensus       156 ~~~~Y~~sK~~~e~~~~~~--~~~~~~iR~~~v~gp~~-~~~~~  196 (330)
T 2pzm_A          156 PFTSYGISKTAGEAFLMMS--DVPVVSLRLANVTGPRL-AIGPI  196 (330)
T ss_dssp             CCSHHHHHHHHHHHHHHTC--SSCEEEEEECEEECTTC-CSSHH
T ss_pred             CCChHHHHHHHHHHHHHHc--CCCEEEEeeeeeECcCC-CCCHH
Confidence            5678999999999999887  4444 567 67777875 45543

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.91  E-value=4.2e-24  Score=170.67  Aligned_cols=193  Identities=12%  Similarity=0.044  Sum_probs=138.3

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhC--CCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLE--GASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      ++|+++||||+|+||++++++|+++  |++|++++|++++.+..       ...+.++.+|++++++++++++       
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~D~~d~~~~~~~~~-------   68 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-------GGEADVFIGDITDADSINPAFQ-------   68 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-------TCCTTEEECCTTSHHHHHHHHT-------
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-------CCCeeEEEecCCCHHHHHHHHc-------
Confidence            4689999999999999999999999  89999999987654322       3356678999999998887765       


Q ss_pred             CCCEEEEcCCCCCCCC--------ccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCch-
Q 027248           89 KIDVVVSNAAANPSVD--------SILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAM-  159 (226)
Q Consensus        89 ~id~li~nag~~~~~~--------~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~-  159 (226)
                      .+|+||||||......        ...+...+++.+.+++|+.++.++++++...  +.++||++||..+..+.++... 
T Consensus        69 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~iv~~SS~~~~~~~~~~~~~  146 (253)
T 1xq6_A           69 GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA--GVKHIVVVGSMGGTNPDHPLNKL  146 (253)
T ss_dssp             TCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH--TCSEEEEEEETTTTCTTCGGGGG
T ss_pred             CCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc--CCCEEEEEcCccCCCCCCccccc
Confidence            6999999999753111        0122334455678899999999999988764  2469999999987655444433 


Q ss_pred             ----hhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCcccccccCchhhhhh--ccCCCCCchhhhccc
Q 027248          160 ----YGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVVSSV--SSLKLSPPSSLTLAV  225 (226)
Q Consensus       160 ----Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~--~~~~~~~p~~~a~av  225 (226)
                          |+.+|++++.+++.      .+++++.++||++.++.......-......+  ....+..++|+|+++
T Consensus       147 ~~~~y~~sK~~~e~~~~~------~~i~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dva~~~  212 (253)
T 1xq6_A          147 GNGNILVWKRKAEQYLAD------SGTPYTIIRAGGLLDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVC  212 (253)
T ss_dssp             GGCCHHHHHHHHHHHHHT------SSSCEEEEEECEEECSCSSSSCEEEESTTGGGGSSCCEEEHHHHHHHH
T ss_pred             cchhHHHHHHHHHHHHHh------CCCceEEEecceeecCCcchhhhhccCCcCCcCCCCcEEcHHHHHHHH
Confidence                55699999988752      4899999999999998542110000000111  123456778887654

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.91  E-value=1.4e-22  Score=172.74  Aligned_cols=182  Identities=13%  Similarity=0.085  Sum_probs=137.3

Q ss_pred             cccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHH----------------HHHHHH-HhcCCcEEEEEe
Q 027248            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVD----------------EAVVKL-KARGIEVIGVVC   68 (226)
Q Consensus         6 ~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~----------------~~~~~~-~~~~~~~~~~~~   68 (226)
                      .+....+.+|+||||+|.||++++++|+++|++|++++|+.....                ....++ ...+.++.++.+
T Consensus         5 ~~~~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~   84 (404)
T 1i24_A            5 HHHHHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVG   84 (404)
T ss_dssp             -------CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEES
T ss_pred             cccccCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEEC
Confidence            345677899999999999999999999999999999998653321                111111 112456788899


Q ss_pred             eCCCHHHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEecc
Q 027248           69 HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (226)
Q Consensus        69 Dv~~~~~v~~~~~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~  148 (226)
                      |++++++++++++..     ++|+|||+||...  ......+.+++...+++|+.|+.++++++.+.-. ..+||++||.
T Consensus        85 Dl~d~~~~~~~~~~~-----~~D~Vih~A~~~~--~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-~~~~V~~SS~  156 (404)
T 1i24_A           85 DICDFEFLAESFKSF-----EPDSVVHFGEQRS--APYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGE-ECHLVKLGTM  156 (404)
T ss_dssp             CTTSHHHHHHHHHHH-----CCSEEEECCSCCC--HHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCT-TCEEEEECCG
T ss_pred             CCCCHHHHHHHHhcc-----CCCEEEECCCCCC--ccchhhCccchhhhHHHHHHHHHHHHHHHHHhCC-CcEEEEeCcH
Confidence            999999988887754     7999999999753  1122235667788999999999999999976521 1499999998


Q ss_pred             CCcC------------------------CCCCCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCcc
Q 027248          149 AGYQ------------------------PQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFA  197 (226)
Q Consensus       149 ~~~~------------------------~~~~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~  197 (226)
                      +.+.                        +..+...|+.||++.+.+++.++.++  +++++.+.||.+.+|..
T Consensus       157 ~vyg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--gi~~~ivrp~~v~Gp~~  227 (404)
T 1i24_A          157 GEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW--GIRATDLNQGVVYGVKT  227 (404)
T ss_dssp             GGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH--CCEEEEEEECEEECSCC
T ss_pred             HHhCCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc--CCeEEEEecceeeCCCC
Confidence            6542                        23346789999999999999998887  89999999999998854

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.90  E-value=2.4e-23  Score=173.56  Aligned_cols=172  Identities=18%  Similarity=0.104  Sum_probs=129.8

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhc---CCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR---GIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      .++|+++||||+|+||++++++|+++|++|+++.|+.+....... +.+.   ..++.++.+|++++++++++++     
T Consensus         3 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   76 (337)
T 2c29_D            3 SQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKH-LLDLPKAETHLTLWKADLADEGSFDEAIK-----   76 (337)
T ss_dssp             ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHH-HHTSTTHHHHEEEEECCTTSTTTTHHHHT-----
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHH-HHhcccCCCeEEEEEcCCCCHHHHHHHHc-----
Confidence            467999999999999999999999999999999998775433221 1111   1247788999999988777664     


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCC------------
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQ------------  154 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~------------  154 (226)
                        .+|+|||+|+...    ...  .+..++.+++|+.|+.++++++.+.. ..++||++||..+..+.            
T Consensus        77 --~~d~Vih~A~~~~----~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~-~~~riV~~SS~~~~~~~~~~~~~~~E~~~  147 (337)
T 2c29_D           77 --GCTGVFHVATPMD----FES--KDPENEVIKPTIEGMLGIMKSCAAAK-TVRRLVFTSSAGTVNIQEHQLPVYDESCW  147 (337)
T ss_dssp             --TCSEEEECCCCCC----SSC--SSHHHHTHHHHHHHHHHHHHHHHHHS-CCCEEEEECCGGGTSCSSSCCSEECTTCC
T ss_pred             --CCCEEEEeccccC----CCC--CChHHHHHHHHHHHHHHHHHHHHhCC-CccEEEEeeeHhhcccCCCCCcccCcccC
Confidence              6899999998642    111  12335789999999999999998753 13599999998743221            


Q ss_pred             ----------CCCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCccc
Q 027248          155 ----------SSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAE  198 (226)
Q Consensus       155 ----------~~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~~  198 (226)
                                ++...|+.||++.+.+++.++.+.  +++++.+.|+.+.+|...
T Consensus       148 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--gi~~~~lrp~~v~Gp~~~  199 (337)
T 2c29_D          148 SDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKEN--NIDFITIIPTLVVGPFIM  199 (337)
T ss_dssp             CCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHH--TCCEEEEEECEEESCCSC
T ss_pred             CchhhhcccCCccchHHHHHHHHHHHHHHHHHHc--CCcEEEEeCCceECCCCC
Confidence                      123469999999999988877654  899999999999998643

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.90  E-value=8.8e-23  Score=171.23  Aligned_cols=175  Identities=17%  Similarity=0.033  Sum_probs=139.6

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcch----HHHHHHHHHhc-CCcEEEEEeeCCCHHHHHHHHHH
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN----VDEAVVKLKAR-GIEVIGVVCHVSNGQQRKNLINQ   82 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~----~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~   82 (226)
                      .++++++++||||+|+||++++++|+++|++|++++|+...    ++...+++... ..++.++.+|+++.++++++++ 
T Consensus        23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-  101 (352)
T 1sb8_A           23 LPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA-  101 (352)
T ss_dssp             HHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT-
T ss_pred             cCccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc-
Confidence            44678999999999999999999999999999999998653    22222221110 2467889999999998877765 


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCC-------
Q 027248           83 TIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQS-------  155 (226)
Q Consensus        83 ~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~-------  155 (226)
                            .+|+|||+||....     ..+.+++++.+++|+.++.++++++.+.  +.++||++||...+.+.+       
T Consensus       102 ------~~d~vih~A~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~v~~SS~~~~~~~~~~~~~E~  168 (352)
T 1sb8_A          102 ------GVDYVLHQAALGSV-----PRSINDPITSNATNIDGFLNMLIAARDA--KVQSFTYAASSSTYGDHPGLPKVED  168 (352)
T ss_dssp             ------TCSEEEECCSCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHT--TCSEEEEEEEGGGGTTCCCSSBCTT
T ss_pred             ------CCCEEEECCcccCc-----hhhhhCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEeccHHhcCCCCCCCCCCC
Confidence                  89999999997531     1245678899999999999999999764  346999999987764332       


Q ss_pred             ----CCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCccc
Q 027248          156 ----SMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAE  198 (226)
Q Consensus       156 ----~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~~  198 (226)
                          +...|+.+|++.+.+++.++.++  +++++.+.||.+.+|...
T Consensus       169 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~--g~~~~ilRp~~v~G~~~~  213 (352)
T 1sb8_A          169 TIGKPLSPYAVTKYVNELYADVFSRCY--GFSTIGLRYFNVFGRRQD  213 (352)
T ss_dssp             CCCCCCSHHHHHHHHHHHHHHHHHHHH--CCCCEEEEECCEECTTCC
T ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHc--CCCEEEEEECceeCcCCC
Confidence                46789999999999999999887  789999999999988643

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.90  E-value=7.1e-23  Score=170.50  Aligned_cols=169  Identities=18%  Similarity=0.068  Sum_probs=134.9

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCC--CeEEEEecCcc--hHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEG--ASVVVSSRKQK--NVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g--~~v~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      +++++||||+|+||++++++|+++|  ++|++++|+..  ..+.. +++. ...++.++.+|+++++++++++       
T Consensus         3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~d~~~~~~~~-------   73 (336)
T 2hun_A            3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANL-KDLE-DDPRYTFVKGDVADYELVKELV-------   73 (336)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGG-TTTT-TCTTEEEEECCTTCHHHHHHHH-------
T ss_pred             CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHH-hhhc-cCCceEEEEcCCCCHHHHHHHh-------
Confidence            3569999999999999999999997  89999998742  22111 1111 1346888999999999888776       


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcC-----------CCCC
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ-----------PQSS  156 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~-----------~~~~  156 (226)
                      +++|+|||+||...     .+.+.+++++.+++|+.++.++++++.+. ...++||++||.+.+.           +.++
T Consensus        74 ~~~d~vih~A~~~~-----~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~  147 (336)
T 2hun_A           74 RKVDGVVHLAAESH-----VDRSISSPEIFLHSNVIGTYTLLESIRRE-NPEVRFVHVSTDEVYGDILKGSFTENDRLMP  147 (336)
T ss_dssp             HTCSEEEECCCCCC-----HHHHHHCTHHHHHHHHHHHHHHHHHHHHH-CTTSEEEEEEEGGGGCCCSSSCBCTTBCCCC
T ss_pred             hCCCEEEECCCCcC-----hhhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEeccHHHHCCCCCCCcCCCCCCCC
Confidence            28999999999753     12345677889999999999999999987 2236999999976432           3345


Q ss_pred             CchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCcc
Q 027248          157 MAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFA  197 (226)
Q Consensus       157 ~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~  197 (226)
                      ...|+.||++.+.+++.++.++  +++++.+.||.+.+|..
T Consensus       148 ~~~Y~~sK~~~e~~~~~~~~~~--~~~~~ilrp~~v~g~~~  186 (336)
T 2hun_A          148 SSPYSATKAASDMLVLGWTRTY--NLNASITRCTNNYGPYQ  186 (336)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHT--TCEEEEEEECEEESTTC
T ss_pred             CCccHHHHHHHHHHHHHHHHHh--CCCEEEEeeeeeeCcCC
Confidence            6789999999999999999886  79999999999999864

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.90  E-value=9.3e-24  Score=170.79  Aligned_cols=154  Identities=18%  Similarity=0.209  Sum_probs=126.6

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCE
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~   92 (226)
                      |+++||||+|+||++++++|+++|++|++++|++++..         ...+.++.+|++++++++++++       .+|+
T Consensus         3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~-------~~d~   66 (267)
T 3ay3_A            3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA---------EAHEEIVACDLADAQAVHDLVK-------DCDG   66 (267)
T ss_dssp             EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC---------CTTEEECCCCTTCHHHHHHHHT-------TCSE
T ss_pred             ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc---------CCCccEEEccCCCHHHHHHHHc-------CCCE
Confidence            67999999999999999999999999999999876421         1246788899999998877765       6999


Q ss_pred             EEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCC------------CCchh
Q 027248           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQS------------SMAMY  160 (226)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~------------~~~~Y  160 (226)
                      ||||||...         .+++++.+++|+.++.++++++.+.  ..++||++||..++...+            +...|
T Consensus        67 vi~~a~~~~---------~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~~Y  135 (267)
T 3ay3_A           67 IIHLGGVSV---------ERPWNDILQANIIGAYNLYEAARNL--GKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLY  135 (267)
T ss_dssp             EEECCSCCS---------CCCHHHHHHHTHHHHHHHHHHHHHT--TCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCSHH
T ss_pred             EEECCcCCC---------CCCHHHHHHHHHHHHHHHHHHHHHh--CCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCChH
Confidence            999999752         2346789999999999999998763  346999999987654322            35789


Q ss_pred             hHhHHHHHHHHHHHHHHhCCCeEEEEEecCce-eCC
Q 027248          161 GVTKTALLGLTKALAAEMAPDTRVNCVAPGFV-PTH  195 (226)
Q Consensus       161 ~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v-~t~  195 (226)
                      +.||++++.+++.++.+.  +++++.+.||++ .++
T Consensus       136 ~~sK~~~e~~~~~~~~~~--gi~~~~lrp~~v~~~~  169 (267)
T 3ay3_A          136 GLSKCFGEDLASLYYHKF--DIETLNIRIGSCFPKP  169 (267)
T ss_dssp             HHHHHHHHHHHHHHHHTT--CCCEEEEEECBCSSSC
T ss_pred             HHHHHHHHHHHHHHHHHc--CCCEEEEeceeecCCC
Confidence            999999999999886543  899999999997 554

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.90  E-value=6.6e-22  Score=168.28  Aligned_cols=171  Identities=20%  Similarity=0.135  Sum_probs=134.9

Q ss_pred             CEEEEEcCCCchhHHHHHHHH-hCCCeEEEEecCcch---------HHHHHHHHHhcC-----Cc---EEEEEeeCCCHH
Q 027248           13 KVAIVTASTQGIGFGIAERLG-LEGASVVVSSRKQKN---------VDEAVVKLKARG-----IE---VIGVVCHVSNGQ   74 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~-~~g~~v~~~~r~~~~---------~~~~~~~~~~~~-----~~---~~~~~~Dv~~~~   74 (226)
                      .+++||||+|+||++++++|+ ++|++|++++|+...         .+...+.+.+..     ..   +.++.+|+++++
T Consensus         3 m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~   82 (397)
T 1gy8_A            3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNED   82 (397)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCHH
Confidence            479999999999999999999 999999999998654         333333233221     13   788999999999


Q ss_pred             HHHHHHHHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCC
Q 027248           75 QRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQ  154 (226)
Q Consensus        75 ~v~~~~~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~  154 (226)
                      ++++++++    ++++|+|||+||.... .    .+.+++++.+++|+.+++++++++...  +.++||++||.+.+...
T Consensus        83 ~~~~~~~~----~~~~d~vih~A~~~~~-~----~~~~~~~~~~~~Nv~g~~~ll~a~~~~--~~~~iv~~SS~~v~g~~  151 (397)
T 1gy8_A           83 FLNGVFTR----HGPIDAVVHMCAFLAV-G----ESVRDPLKYYDNNVVGILRLLQAMLLH--KCDKIIFSSSAAIFGNP  151 (397)
T ss_dssp             HHHHHHHH----SCCCCEEEECCCCCCH-H----HHHHCHHHHHHHHHHHHHHHHHHHHHT--TCCEEEEEEEGGGTBSC
T ss_pred             HHHHHHHh----cCCCCEEEECCCccCc-C----cchhhHHHHHHHHhHHHHHHHHHHHHh--CCCEEEEECCHHHhCCC
Confidence            98777653    4569999999997531 1    245677899999999999999987653  23699999997654322


Q ss_pred             C------------------CCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCc
Q 027248          155 S------------------SMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHF  196 (226)
Q Consensus       155 ~------------------~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~  196 (226)
                      .                  +...|+.||++.+.+++.++.++  +++++.+.|+.+..+.
T Consensus       152 ~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~--gi~~~ilRp~~v~G~~  209 (397)
T 1gy8_A          152 TMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY--GIKGICLRYFNACGAH  209 (397)
T ss_dssp             CC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH--CCEEEEEEECEEECCC
T ss_pred             CcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH--CCcEEEEeccceeCCC
Confidence            1                  25789999999999999999987  8999999999997664

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.90  E-value=1.4e-23  Score=164.97  Aligned_cols=172  Identities=15%  Similarity=0.177  Sum_probs=135.9

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCC-HHHHHHHHHHHHHHhCCCCE
Q 027248           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN-GQQRKNLINQTIEKFGKIDV   92 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~~~id~   92 (226)
                      +++||||+|+||++++++|+++|++|++++|++++.+..        ..+.++.+|+++ +++++++++       .+|+
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--------~~~~~~~~D~~d~~~~~~~~~~-------~~d~   66 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY--------NNVKAVHFDVDWTPEEMAKQLH-------GMDA   66 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC--------TTEEEEECCTTSCHHHHHTTTT-------TCSE
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc--------CCceEEEecccCCHHHHHHHHc-------CCCE
Confidence            489999999999999999999999999999998764332        468899999999 888777654       7999


Q ss_pred             EEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCC-------CchhhHhHH
Q 027248           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSS-------MAMYGVTKT  165 (226)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~-------~~~Y~~sKa  165 (226)
                      ||||||...             .+.+++|+.++.++++++...  ..++||++||..+..+.+.       ...|+.+|+
T Consensus        67 vi~~ag~~~-------------~~~~~~n~~~~~~l~~a~~~~--~~~~iv~~SS~~~~~~~~~~e~~~~~~~~Y~~sK~  131 (219)
T 3dqp_A           67 IINVSGSGG-------------KSLLKVDLYGAVKLMQAAEKA--EVKRFILLSTIFSLQPEKWIGAGFDALKDYYIAKH  131 (219)
T ss_dssp             EEECCCCTT-------------SSCCCCCCHHHHHHHHHHHHT--TCCEEEEECCTTTTCGGGCCSHHHHHTHHHHHHHH
T ss_pred             EEECCcCCC-------------CCcEeEeHHHHHHHHHHHHHh--CCCEEEEECcccccCCCcccccccccccHHHHHHH
Confidence            999999764             126789999999999988543  2359999999988766555       789999999


Q ss_pred             HHHHHHHHHHHHhCCCeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          166 ALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       166 a~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +.+.+.+     -..+++++.+.||++.++........     .-....+..++|+|+++
T Consensus       132 ~~e~~~~-----~~~~i~~~ilrp~~v~g~~~~~~~~~-----~~~~~~~i~~~Dva~~i  181 (219)
T 3dqp_A          132 FADLYLT-----KETNLDYTIIQPGALTEEEATGLIDI-----NDEVSASNTIGDVADTI  181 (219)
T ss_dssp             HHHHHHH-----HSCCCEEEEEEECSEECSCCCSEEEE-----SSSCCCCEEHHHHHHHH
T ss_pred             HHHHHHH-----hccCCcEEEEeCceEecCCCCCcccc-----CCCcCCcccHHHHHHHH
Confidence            9999886     13389999999999988754332211     12334567788887764

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.90  E-value=1.3e-22  Score=170.55  Aligned_cols=170  Identities=13%  Similarity=0.074  Sum_probs=136.7

Q ss_pred             EEEEEcCCCchhHHHHHHHHhC-CCeEEEEecCc--chHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           14 VAIVTASTQGIGFGIAERLGLE-GASVVVSSRKQ--KNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~-g~~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      +++||||+|+||++++++|++. |++|++++|+.  ...+.. .++. ...++.++.+|+++.+++++++++.     ++
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~   74 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDIS-ESNRYNFEHADICDSAEITRIFEQY-----QP   74 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTTT-TCTTEEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhh-hhhh-cCCCeEEEECCCCCHHHHHHHHhhc-----CC
Confidence            3899999999999999999998 79999999875  222221 1111 1346888999999999988887752     89


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc-------CCEEEEEeccCCcC-----------
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-------GSSVVLISSIAGYQ-----------  152 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~-------~~~iv~~sS~~~~~-----------  152 (226)
                      |+|||+||...     .+.+.+++++.+++|+.+++++++++.+.|.+       +++||++||.+.+.           
T Consensus        75 d~vih~A~~~~-----~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~  149 (361)
T 1kew_A           75 DAVMHLAAESH-----VDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENS  149 (361)
T ss_dssp             SEEEECCSCCC-----HHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTT
T ss_pred             CEEEECCCCcC-----hhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCccccccccc
Confidence            99999999753     12345677899999999999999999998643       25999999975331           


Q ss_pred             ----------CCCCCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCcc
Q 027248          153 ----------PQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFA  197 (226)
Q Consensus       153 ----------~~~~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~  197 (226)
                                +.++...|+.||++++.+++.++.++  +++++.+.||.+.+|..
T Consensus       150 ~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--gi~~~~vrp~~v~G~~~  202 (361)
T 1kew_A          150 VTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY--GLPTIVTNCSNNYGPYH  202 (361)
T ss_dssp             SCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH--CCCEEEEEECEEESTTC
T ss_pred             ccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh--CCcEEEEeeceeECCCC
Confidence                      23456789999999999999999887  79999999999999874

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.89  E-value=2e-22  Score=168.76  Aligned_cols=174  Identities=14%  Similarity=0.026  Sum_probs=141.7

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcC-----CcEEEEEeeCCCHHHHHHHHHH
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG-----IEVIGVVCHVSNGQQRKNLINQ   82 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~   82 (226)
                      +.+++|+|+||||+|+||++++++|+++|++|++++|+..........+....     .++.++.+|++++++++++++ 
T Consensus        21 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   99 (351)
T 3ruf_A           21 LIFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK-   99 (351)
T ss_dssp             HHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT-
T ss_pred             CCCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc-
Confidence            44568999999999999999999999999999999998776555555554331     468899999999998877765 


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCC--------
Q 027248           83 TIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQ--------  154 (226)
Q Consensus        83 ~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~--------  154 (226)
                            .+|+|||+||....     ..+.+++...+++|+.++.++++++...-  -+++|++||...+...        
T Consensus       100 ------~~d~Vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~~~--~~~~v~~SS~~vyg~~~~~~~~E~  166 (351)
T 3ruf_A          100 ------GVDHVLHQAALGSV-----PRSIVDPITTNATNITGFLNILHAAKNAQ--VQSFTYAASSSTYGDHPALPKVEE  166 (351)
T ss_dssp             ------TCSEEEECCCCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHTT--CSEEEEEEEGGGGTTCCCSSBCTT
T ss_pred             ------CCCEEEECCccCCc-----chhhhCHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEEecHHhcCCCCCCCCccC
Confidence                  89999999997531     23456678899999999999999987642  3499999998765332        


Q ss_pred             ---CCCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCcc
Q 027248          155 ---SSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFA  197 (226)
Q Consensus       155 ---~~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~  197 (226)
                         .+...|+.+|.+.+.+++.++.+.  +++++.+.|+.+..|..
T Consensus       167 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~--g~~~~ilRp~~v~G~~~  210 (351)
T 3ruf_A          167 NIGNPLSPYAVTKYVNEIYAQVYARTY--GFKTIGLRYFNVFGRRQ  210 (351)
T ss_dssp             CCCCCCSHHHHHHHHHHHHHHHHHHHH--CCCCEEEEECSEESTTC
T ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHh--CCCEEEEeeCceeCcCC
Confidence               235789999999999999999887  78899999999987754

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.89  E-value=9.6e-23  Score=169.98  Aligned_cols=159  Identities=14%  Similarity=0.129  Sum_probs=125.5

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCEE
Q 027248           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVV   93 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~l   93 (226)
                      +++||||+|+||++++++|+++|++|++++|+.++.+..    ..  ..+.++.+|++++++++++++       .+|+|
T Consensus        15 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l----~~--~~~~~~~~Dl~d~~~~~~~~~-------~~d~v   81 (342)
T 2x4g_A           15 KYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRL----AY--LEPECRVAEMLDHAGLERALR-------GLDGV   81 (342)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGG----GG--GCCEEEECCTTCHHHHHHHTT-------TCSEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhh----cc--CCeEEEEecCCCHHHHHHHHc-------CCCEE
Confidence            799999999999999999999999999999988764322    11  256788999999998877665       79999


Q ss_pred             EEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCC----------------C
Q 027248           94 VSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSS----------------M  157 (226)
Q Consensus        94 i~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~----------------~  157 (226)
                      ||+||...       .+.+++++.+++|+.++.++++++.+.  ..+++|++||...+...+.                .
T Consensus        82 ih~a~~~~-------~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~~~~  152 (342)
T 2x4g_A           82 IFSAGYYP-------SRPRRWQEEVASALGQTNPFYAACLQA--RVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGK  152 (342)
T ss_dssp             EEC-------------------CHHHHHHHHHHHHHHHHHHH--TCSCEEEECCGGGSCCCTTSSCBCTTCCCSSCCTTS
T ss_pred             EECCccCc-------CCCCCHHHHHHHHHHHHHHHHHHHHHc--CCCeEEEECCHHhhCcCCCCCCCCCCCCCCcccccc
Confidence            99999643       234577889999999999999999875  3368999999987654443                6


Q ss_pred             chhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCcc
Q 027248          158 AMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFA  197 (226)
Q Consensus       158 ~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~  197 (226)
                      ..|+.+|++.+.+++.++.+   +++++.+.||++.++..
T Consensus       153 ~~Y~~sK~~~e~~~~~~~~~---g~~~~ilrp~~v~g~~~  189 (342)
T 2x4g_A          153 SSYVLCKWALDEQAREQARN---GLPVVIGIPGMVLGELD  189 (342)
T ss_dssp             CHHHHHHHHHHHHHHHHHHT---TCCEEEEEECEEECSCC
T ss_pred             ChHHHHHHHHHHHHHHHhhc---CCcEEEEeCCceECCCC
Confidence            78999999999999998863   79999999999998865

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.89  E-value=3.2e-23  Score=163.50  Aligned_cols=156  Identities=10%  Similarity=0.021  Sum_probs=125.9

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCE
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~   92 (226)
                      ++++||||+|+||++++++|+++|++|++++|++++.+..       ...+.++.+|++++++++++++       .+|+
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~Dl~d~~~~~~~~~-------~~d~   70 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE-------NEHLKVKKADVSSLDEVCEVCK-------GADA   70 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC-------CTTEEEECCCTTCHHHHHHHHT-------TCSE
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc-------cCceEEEEecCCCHHHHHHHhc-------CCCE
Confidence            5799999999999999999999999999999998764321       2468899999999999887766       7999


Q ss_pred             EEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCC----------CCCchhhH
Q 027248           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQ----------SSMAMYGV  162 (226)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~----------~~~~~Y~~  162 (226)
                      |||+||....           ..+.+++|+.++.++++++...-  .+++|++||..+..+.          .+...|+.
T Consensus        71 vi~~a~~~~~-----------~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~Y~~  137 (227)
T 3dhn_A           71 VISAFNPGWN-----------NPDIYDETIKVYLTIIDGVKKAG--VNRFLMVGGAGSLFIAPGLRLMDSGEVPENILPG  137 (227)
T ss_dssp             EEECCCC-----------------CCSHHHHHHHHHHHHHHHTT--CSEEEEECCSTTSEEETTEEGGGTTCSCGGGHHH
T ss_pred             EEEeCcCCCC-----------ChhHHHHHHHHHHHHHHHHHHhC--CCEEEEeCChhhccCCCCCccccCCcchHHHHHH
Confidence            9999986421           12378899999999999987642  3489999998865433          23678999


Q ss_pred             hHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCcc
Q 027248          163 TKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFA  197 (226)
Q Consensus       163 sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~  197 (226)
                      +|++.+.+.+.++.+.  +++++.+.||++.++..
T Consensus       138 sK~~~e~~~~~~~~~~--~~~~~ilrp~~v~g~~~  170 (227)
T 3dhn_A          138 VKALGEFYLNFLMKEK--EIDWVFFSPAADMRPGV  170 (227)
T ss_dssp             HHHHHHHHHHTGGGCC--SSEEEEEECCSEEESCC
T ss_pred             HHHHHHHHHHHHhhcc--CccEEEEeCCcccCCCc
Confidence            9999999998887643  89999999999987643

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.89  E-value=5.3e-22  Score=165.97  Aligned_cols=171  Identities=16%  Similarity=0.099  Sum_probs=134.3

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcch------HHHHHHHHHh-cCCcEEEEEeeCCCHHHHHHHHHHHH
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN------VDEAVVKLKA-RGIEVIGVVCHVSNGQQRKNLINQTI   84 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~------~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (226)
                      +|+++||||+|+||++++++|+++|++|++++|+...      .....+++.. .+.++.++.+|+++++++++++++. 
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~-   80 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY-   80 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC-
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhc-
Confidence            4789999999999999999999999999999986543      2223333332 2446788899999999988877642 


Q ss_pred             HHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCC-----------
Q 027248           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP-----------  153 (226)
Q Consensus        85 ~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~-----------  153 (226)
                          ++|+|||+||.... .    .+.+++++.+++|+.++.++++++...  ..++||++||...+..           
T Consensus        81 ----~~d~vih~A~~~~~-~----~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~iv~~SS~~~~g~~~~~~~~E~~~  149 (348)
T 1ek6_A           81 ----SFMAVIHFAGLKAV-G----ESVQKPLDYYRVNLTGTIQLLEIMKAH--GVKNLVFSSSATVYGNPQYLPLDEAHP  149 (348)
T ss_dssp             ----CEEEEEECCSCCCH-H----HHHHCHHHHHHHHHHHHHHHHHHHHHT--TCCEEEEEEEGGGGCSCSSSSBCTTSC
T ss_pred             ----CCCEEEECCCCcCc-c----chhhchHHHHHHHHHHHHHHHHHHHHh--CCCEEEEECcHHHhCCCCCCCcCCCCC
Confidence                79999999997531 1    134667889999999999999987553  2369999999876521           


Q ss_pred             -CCCCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCC
Q 027248          154 -QSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTH  195 (226)
Q Consensus       154 -~~~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~  195 (226)
                       .|....|+.||++++.+++.++.+ .+++++..+.|+.+-.|
T Consensus       150 ~~p~~~~Y~~sK~~~e~~~~~~~~~-~~~~~~~~lR~~~v~G~  191 (348)
T 1ek6_A          150 TGGCTNPYGKSKFFIEEMIRDLCQA-DKTWNAVLLRYFNPTGA  191 (348)
T ss_dssp             CCCCSSHHHHHHHHHHHHHHHHHHH-CTTCEEEEEEECEEECC
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHhc-CCCcceEEEeeccccCC
Confidence             123678999999999999999988 45799999999988765

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.89  E-value=1.8e-22  Score=168.55  Aligned_cols=171  Identities=20%  Similarity=0.199  Sum_probs=136.5

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCC-------CeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEG-------ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNL   79 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g-------~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   79 (226)
                      +.++++++++||||+|+||++++++|+++|       ++|++++|+.+....      ....++.++.+|++++++++++
T Consensus         9 ~~~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~------~~~~~~~~~~~Dl~d~~~~~~~   82 (342)
T 2hrz_A            9 NLYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA------GFSGAVDARAADLSAPGEAEKL   82 (342)
T ss_dssp             CSCCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT------TCCSEEEEEECCTTSTTHHHHH
T ss_pred             CCCccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc------ccCCceeEEEcCCCCHHHHHHH
Confidence            345678999999999999999999999999       799999998754321      1245678899999999988877


Q ss_pred             HHHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc---CCEEEEEeccCCcCCC-C
Q 027248           80 INQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQ-S  155 (226)
Q Consensus        80 ~~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~---~~~iv~~sS~~~~~~~-~  155 (226)
                      ++      +.+|+|||+||...      ..+.+++++.+++|+.++.++++++.+..++   .++||++||.+.+.+. +
T Consensus        83 ~~------~~~d~vih~A~~~~------~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~  150 (342)
T 2hrz_A           83 VE------ARPDVIFHLAAIVS------GEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLP  150 (342)
T ss_dssp             HH------TCCSEEEECCCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCC
T ss_pred             Hh------cCCCEEEECCccCc------ccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCC
Confidence            65      48999999999743      1345678999999999999999999875421   4699999999765432 2


Q ss_pred             ----------CCchhhHhHHHHHHHHHHHHHHhCC---CeEEEEEe--cCceeCC
Q 027248          156 ----------SMAMYGVTKTALLGLTKALAAEMAP---DTRVNCVA--PGFVPTH  195 (226)
Q Consensus       156 ----------~~~~Y~~sKaa~~~~~~~la~e~~~---~i~v~~v~--Pg~v~t~  195 (226)
                                +...|+.||++.+.+++.++.+..-   .+|++.+.  ||...++
T Consensus       151 ~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~  205 (342)
T 2hrz_A          151 YPIPDEFHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAA  205 (342)
T ss_dssp             SSBCTTCCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCS
T ss_pred             CCcCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcch
Confidence                      5678999999999999999887532   46777777  8876554

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.88  E-value=2.2e-22  Score=169.42  Aligned_cols=168  Identities=17%  Similarity=0.108  Sum_probs=126.5

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHh--CCCeEEEEecCcchHHHHH-------HHHHhcCCcEEEEEeeCCCHHHHHH
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGL--EGASVVVSSRKQKNVDEAV-------VKLKARGIEVIGVVCHVSNGQQRKN   78 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~--~g~~v~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~Dv~~~~~v~~   78 (226)
                      +++++|+|+||||+|+||++++++|++  .|++|++++|+........       ......+..+.++.+|++++++++.
T Consensus         6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~   85 (362)
T 3sxp_A            6 DELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRR   85 (362)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHH
T ss_pred             hhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHH
Confidence            467899999999999999999999999  9999999999765211100       0011123456889999999998877


Q ss_pred             HHHHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCC----
Q 027248           79 LINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQ----  154 (226)
Q Consensus        79 ~~~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~----  154 (226)
                      +      ...++|+|||+||...       .+.++++..+++|+.++.++++++...   +.+||++||.+.+...    
T Consensus        86 ~------~~~~~D~vih~A~~~~-------~~~~~~~~~~~~Nv~gt~~ll~aa~~~---~~~~V~~SS~~vyg~~~~~~  149 (362)
T 3sxp_A           86 L------EKLHFDYLFHQAAVSD-------TTMLNQELVMKTNYQAFLNLLEIARSK---KAKVIYASSAGVYGNTKAPN  149 (362)
T ss_dssp             H------TTSCCSEEEECCCCCG-------GGCCCHHHHHHHHTHHHHHHHHHHHHT---TCEEEEEEEGGGGCSCCSSB
T ss_pred             h------hccCCCEEEECCccCC-------ccccCHHHHHHHHHHHHHHHHHHHHHc---CCcEEEeCcHHHhCCCCCCC
Confidence            6      2358999999999643       244567899999999999999999553   4569999996554221    


Q ss_pred             ------CCCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCC
Q 027248          155 ------SSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTH  195 (226)
Q Consensus       155 ------~~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~  195 (226)
                            .+...|+.||++.+.+++.++.+    +.+..+.|+.+..|
T Consensus       150 ~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~----~~~~~lR~~~v~Gp  192 (362)
T 3sxp_A          150 VVGKNESPENVYGFSKLCMDEFVLSHSND----NVQVGLRYFNVYGP  192 (362)
T ss_dssp             CTTSCCCCSSHHHHHHHHHHHHHHHTTTT----SCEEEEEECSEEST
T ss_pred             CCCCCCCCCChhHHHHHHHHHHHHHHhcc----CCEEEEEeCceeCc
Confidence                  23456999999999999998877    45566666655544

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.88  E-value=3.4e-22  Score=171.99  Aligned_cols=168  Identities=13%  Similarity=0.045  Sum_probs=129.3

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcc---hHHHHHHHHHh---------cCCcEEEEEeeCCCHHHHH
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK---NVDEAVVKLKA---------RGIEVIGVVCHVSNGQQRK   77 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~---~~~~~~~~~~~---------~~~~~~~~~~Dv~~~~~v~   77 (226)
                      ..+|+|+||||+|+||++++++|++.|++|++++|+++   ..+...+.+..         ...++.++.+|+++++.+.
T Consensus        67 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~  146 (427)
T 4f6c_A           67 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV  146 (427)
T ss_dssp             CCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC
T ss_pred             CCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC
Confidence            45789999999999999999999999999999999987   33333333322         1357889999999988776


Q ss_pred             HHHHHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCC-------
Q 027248           78 NLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG-------  150 (226)
Q Consensus        78 ~~~~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~-------  150 (226)
                              ..+++|+||||||...        ..+++++.+++|+.++.++++++.+   ..+++|++||..+       
T Consensus       147 --------~~~~~d~Vih~A~~~~--------~~~~~~~~~~~Nv~g~~~l~~aa~~---~~~~~v~~SS~~~G~~~~~~  207 (427)
T 4f6c_A          147 --------LPENMDTIIHAGARTD--------HFGDDDEFEKVNVQGTVDVIRLAQQ---HHARLIYVSTISVGTYFDID  207 (427)
T ss_dssp             --------CSSCCSEEEECCCCC---------------CHHHHHHHHHHHHHHHHHH---TTCEEEEEEEGGGGSEECSS
T ss_pred             --------CcCCCCEEEECCcccC--------CCCCHHHHHHHHHHHHHHHHHHHHh---cCCcEEEECchHhCCCccCC
Confidence                    4579999999999753        1356788999999999999999988   4569999999887       


Q ss_pred             -----------cCCCCCCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCcccc
Q 027248          151 -----------YQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEY  199 (226)
Q Consensus       151 -----------~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~~~  199 (226)
                                 ..+..+...|+.||++.+.+++.++.   .|++++.+.||.+..+....
T Consensus       208 ~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~g~~~~ivRpg~v~G~~~~~  264 (427)
T 4f6c_A          208 TEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN---NGLDGRIVRVGNLTSPYNGR  264 (427)
T ss_dssp             CSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHH---TTCCEEEEEECCEESCSSSC
T ss_pred             CCCccccccccccCCCCCCchHHHHHHHHHHHHHHHH---cCCCEEEEeCCeeecCCCCC
Confidence                       01123678899999999999998764   38999999999999876544

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.88  E-value=3.4e-22  Score=165.34  Aligned_cols=169  Identities=17%  Similarity=0.040  Sum_probs=122.8

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEec-Ccch---HHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSR-KQKN---VDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r-~~~~---~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      ||+++||||+|+||++++++|+++|++|+++.| +++.   .... .++.....++.++.+|++++++++++++      
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   73 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFL-TNLPGASEKLHFFNADLSNPDSFAAAIE------   73 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHH-HTSTTHHHHEEECCCCTTCGGGGHHHHT------
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHH-HhhhccCCceEEEecCCCCHHHHHHHHc------
Confidence            689999999999999999999999999999988 6532   1111 1111001246788899999998877765      


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHH-HHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCC-----------
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESV-LDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQS-----------  155 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~-~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~-----------  155 (226)
                       .+|+|||+|+...       .+.++ +++++++|+.|++++++++.+.. ..++||++||..+..+.+           
T Consensus        74 -~~d~vih~A~~~~-------~~~~~~~~~~~~~nv~gt~~l~~aa~~~~-~~~~iV~~SS~~~~~~~~~~~~~~~e~~~  144 (322)
T 2p4h_X           74 -GCVGIFHTASPID-------FAVSEPEEIVTKRTVDGALGILKACVNSK-TVKRFIYTSSGSAVSFNGKDKDVLDESDW  144 (322)
T ss_dssp             -TCSEEEECCCCC---------------CHHHHHHHHHHHHHHHHHTTCS-SCCEEEEEEEGGGTSCSSSCCSEECTTCC
T ss_pred             -CCCEEEEcCCccc-------CCCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEeccHHHcccCCCCCeecCCccc
Confidence             6899999996421       11222 45689999999999999998762 246999999987542211           


Q ss_pred             -----------CCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCccc
Q 027248          156 -----------SMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAE  198 (226)
Q Consensus       156 -----------~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~~  198 (226)
                                 ....|+.||++.+.+++.++.+.  +++++.+.||++.+|+..
T Consensus       145 ~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~--gi~~~~lrp~~v~g~~~~  196 (322)
T 2p4h_X          145 SDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQN--GIDVVTLILPFIVGRFVC  196 (322)
T ss_dssp             CCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHT--TCCEEEEEECEEESCCCS
T ss_pred             cchhhhcccCcccccHHHHHHHHHHHHHHHHHhc--CCcEEEEcCCceECCCCC
Confidence                       11169999998888777666543  899999999999998654

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.88  E-value=1.5e-21  Score=163.26  Aligned_cols=158  Identities=19%  Similarity=0.144  Sum_probs=127.3

Q ss_pred             cccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus         6 ~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      ...+.++|+|+||||+|+||++++++|+++|++|++++|+++.            ..+.++.+|+++.++++++++    
T Consensus        13 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~------------~~~~~~~~Dl~d~~~~~~~~~----   76 (347)
T 4id9_A           13 GLVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG------------TGGEEVVGSLEDGQALSDAIM----   76 (347)
T ss_dssp             --------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS------------SCCSEEESCTTCHHHHHHHHT----
T ss_pred             cccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC------------CCccEEecCcCCHHHHHHHHh----
Confidence            3456778999999999999999999999999999999998865            356678999999998887765    


Q ss_pred             HhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcC-------------
Q 027248           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ-------------  152 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~-------------  152 (226)
                         .+|+|||+||...       .+.++++..+++|+.++.++++++...  ..++||++||...+.             
T Consensus        77 ---~~d~vih~A~~~~-------~~~~~~~~~~~~nv~~~~~ll~a~~~~--~~~~~V~~SS~~vyg~~~~~~~~~~E~~  144 (347)
T 4id9_A           77 ---GVSAVLHLGAFMS-------WAPADRDRMFAVNVEGTRRLLDAASAA--GVRRFVFASSGEVYPENRPEFLPVTEDH  144 (347)
T ss_dssp             ---TCSEEEECCCCCC-------SSGGGHHHHHHHHTHHHHHHHHHHHHT--TCSEEEEEEEGGGTTTTSCSSSSBCTTS
T ss_pred             ---CCCEEEECCcccC-------cchhhHHHHHHHHHHHHHHHHHHHHHc--CCCeEEEECCHHHhCCCCCCCCCcCCCC
Confidence               8999999999754       223445899999999999999998763  235999999965542             


Q ss_pred             CCCCCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCcee
Q 027248          153 PQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVP  193 (226)
Q Consensus       153 ~~~~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~  193 (226)
                      +..+...|+.+|.+.+.+++.++.+.  +++++.+.|+++.
T Consensus       145 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilRp~~v~  183 (347)
T 4id9_A          145 PLCPNSPYGLTKLLGEELVRFHQRSG--AMETVILRFSHTQ  183 (347)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHS--SSEEEEEEECEEE
T ss_pred             CCCCCChHHHHHHHHHHHHHHHHHhc--CCceEEEccceEe
Confidence            23456789999999999999998885  8999999999988

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.88  E-value=9.6e-22  Score=152.37  Aligned_cols=178  Identities=11%  Similarity=0.042  Sum_probs=130.9

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id   91 (226)
                      +++++||||+|+||++++++|+++|++|++++|++++.+..      ...++.++.+|++++++++++++       .+|
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~~-------~~d   69 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE------GPRPAHVVVGDVLQAADVDKTVA-------GQD   69 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS------SCCCSEEEESCTTSHHHHHHHHT-------TCS
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc------cCCceEEEEecCCCHHHHHHHHc-------CCC
Confidence            37899999999999999999999999999999998654221      13467889999999998877665       689


Q ss_pred             EEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCC----CCchhhHhHHHH
Q 027248           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQS----SMAMYGVTKTAL  167 (226)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~----~~~~Y~~sKaa~  167 (226)
                      ++||+||.... .   +        ..++|+.++.++++++...  +.+++|++||.......+    +...|+.+|+++
T Consensus        70 ~vi~~a~~~~~-~---~--------~~~~n~~~~~~~~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~y~~~K~~~  135 (206)
T 1hdo_A           70 AVIVLLGTRND-L---S--------PTTVMSEGARNIVAAMKAH--GVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRM  135 (206)
T ss_dssp             EEEECCCCTTC-C---S--------CCCHHHHHHHHHHHHHHHH--TCCEEEEECCGGGTSCTTCSCGGGHHHHHHHHHH
T ss_pred             EEEECccCCCC-C---C--------ccchHHHHHHHHHHHHHHh--CCCeEEEEeeeeeccCcccccccchhHHHHHHHH
Confidence            99999997542 1   1        1247888999988888764  345999999997665444    567899999999


Q ss_pred             HHHHHHHHHHhCCCeEEEEEecCce-eCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          168 LGLTKALAAEMAPDTRVNCVAPGFV-PTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       168 ~~~~~~la~e~~~~i~v~~v~Pg~v-~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +.+.+.      .+++++.+.||++ +++....+...  + ...+...+..++|+|+++
T Consensus       136 e~~~~~------~~i~~~~lrp~~~~~~~~~~~~~~~--~-~~~~~~~~i~~~Dva~~~  185 (206)
T 1hdo_A          136 HKVLRE------SGLKYVAVMPPHIGDQPLTGAYTVT--L-DGRGPSRVISKHDLGHFM  185 (206)
T ss_dssp             HHHHHH------TCSEEEEECCSEEECCCCCSCCEEE--S-SSCSSCSEEEHHHHHHHH
T ss_pred             HHHHHh------CCCCEEEEeCCcccCCCCCcceEec--c-cCCCCCCccCHHHHHHHH
Confidence            998742      3899999999998 44432221110  0 001113567788887764

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.88  E-value=2.5e-21  Score=163.25  Aligned_cols=169  Identities=17%  Similarity=0.026  Sum_probs=124.3

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHH-HHHHHHHh----cCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVD-EAVVKLKA----RGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~-~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      +|+++||||+|+||++++++|+++|++|++++|+.+... ...+++.+    .+.++.++.+|++++++++++++..   
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   77 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV---   77 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc---
Confidence            378999999999999999999999999999999865421 11122211    1346788899999999998888765   


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhh-cCCEEEEEeccCCcCC-----------C
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ-KGSSVVLISSIAGYQP-----------Q  154 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~-~~~~iv~~sS~~~~~~-----------~  154 (226)
                        ++|+||||||....     ..+.+++++.+++|+.++.++++++.+... +.++||++||.+.+..           .
T Consensus        78 --~~d~vih~A~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~~~E~~~~  150 (372)
T 1db3_A           78 --QPDEVYNLGAMSHV-----AVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPF  150 (372)
T ss_dssp             --CCSEEEECCCCCTT-----TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCC
T ss_pred             --CCCEEEECCcccCc-----cccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCCCCccCCC
Confidence              79999999997542     123456788999999999999999988653 2369999999865432           2


Q ss_pred             CCCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCce
Q 027248          155 SSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFV  192 (226)
Q Consensus       155 ~~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v  192 (226)
                      .+...|+.||++++.+++.++.++  ++.+..+.|..+
T Consensus       151 ~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~r~~~~  186 (372)
T 1db3_A          151 YPRSPYAVAKLYAYWITVNYRESY--GMYACNGILFNH  186 (372)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHH--CCCEEEEEECCE
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHh--CCCeEEEEECCc
Confidence            346789999999999999999887  344444555443

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.88  E-value=3.3e-21  Score=162.89  Aligned_cols=171  Identities=14%  Similarity=0.018  Sum_probs=130.9

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcch-----HHHHHHHHHh-cCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN-----VDEAVVKLKA-RGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~-----~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      |+++||||+|+||++++++|+++|++|++++|+.+.     ++...++... ....+.++.+|++++++++++++..   
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---  101 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV---  101 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH---
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhc---
Confidence            689999999999999999999999999999998653     2221111110 1345788899999999988887765   


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhh-cCCEEEEEeccCCcCC-----------C
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ-KGSSVVLISSIAGYQP-----------Q  154 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~-~~~~iv~~sS~~~~~~-----------~  154 (226)
                        ++|+|||+||....     ..+.+++++.+++|+.++.++++++.+... +.++||++||...+..           .
T Consensus       102 --~~d~vih~A~~~~~-----~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~  174 (375)
T 1t2a_A          102 --KPTEIYNLGAQSHV-----KISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPF  174 (375)
T ss_dssp             --CCSEEEECCSCCCH-----HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCC
T ss_pred             --CCCEEEECCCcccc-----cccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCCCCccCCC
Confidence              79999999997531     124567889999999999999999988653 2369999999876532           2


Q ss_pred             CCCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCC
Q 027248          155 SSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTH  195 (226)
Q Consensus       155 ~~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~  195 (226)
                      .+...|+.||++++.+++.++.++  ++.+..+.|+.+..|
T Consensus       175 ~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~i~r~~~~~gp  213 (375)
T 1t2a_A          175 YPRSPYGAAKLYAYWIVVNFREAY--NLFAVNGILFNHESP  213 (375)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHH--CCEEEEEEECCEECT
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHh--CCCEEEEecccccCC
Confidence            346789999999999999999887  566666777655544

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.87  E-value=7.4e-22  Score=167.23  Aligned_cols=171  Identities=12%  Similarity=-0.027  Sum_probs=134.3

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCC-CeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEG-ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      ..+++++++||||+|+||++++++|+++| ++|++++|+.......   +. ...++.++.+|++++++++++++     
T Consensus        28 ~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~---l~-~~~~v~~~~~Dl~d~~~l~~~~~-----   98 (377)
T 2q1s_A           28 SKLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKIN---VP-DHPAVRFSETSITDDALLASLQD-----   98 (377)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGG---SC-CCTTEEEECSCTTCHHHHHHCCS-----
T ss_pred             HHhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhh---cc-CCCceEEEECCCCCHHHHHHHhh-----
Confidence            45788999999999999999999999999 9999999986542211   10 13468889999999988766554     


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcC--------------
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ--------------  152 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~--------------  152 (226)
                        .+|+|||+||....     ..+.+++++.+++|+.++.++++++...- ..+++|++||...+.              
T Consensus        99 --~~d~Vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~~V~~SS~~vyg~~~~~~~~~~E~~~  170 (377)
T 2q1s_A           99 --EYDYVFHLATYHGN-----QSSIHDPLADHENNTLTTLKLYERLKHFK-RLKKVVYSAAGCSIAEKTFDDAKATEETD  170 (377)
T ss_dssp             --CCSEEEECCCCSCH-----HHHHHCHHHHHHHHTHHHHHHHHHHTTCS-SCCEEEEEEEC--------------CCCC
T ss_pred             --CCCEEEECCCccCc-----hhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEeCCHHHcCCCCCCCcCcccccc
Confidence              89999999997531     13345678899999999999999986530 224899999976431              


Q ss_pred             --CC-CCCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCcc
Q 027248          153 --PQ-SSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFA  197 (226)
Q Consensus       153 --~~-~~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~  197 (226)
                        +. .+...|+.+|++.+.+++.++.++  +++++.+.||.+..+..
T Consensus       171 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--gi~~~ilRp~~v~G~~~  216 (377)
T 2q1s_A          171 IVSLHNNDSPYSMSKIFGEFYSVYYHKQH--QLPTVRARFQNVYGPGE  216 (377)
T ss_dssp             CCCSSCCCSHHHHHHHHHHHHHHHHHHHH--CCCEEEEEECCEECTTC
T ss_pred             cccccCCCCchHHHHHHHHHHHHHHHHHh--CCCEEEEeeccEECCCC
Confidence              22 456789999999999999998876  79999999999988754

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.87  E-value=1.3e-21  Score=163.67  Aligned_cols=166  Identities=18%  Similarity=0.095  Sum_probs=132.5

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhC--CCeEEEEecCcch-HHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           13 KVAIVTASTQGIGFGIAERLGLE--GASVVVSSRKQKN-VDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~--g~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      |+++||||+|+||++++++|+++  |++|++++|+... ......++  ....+.++.+|++++++++++++       .
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~-------~   75 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI--LGDRVELVVGDIADAELVDKLAA-------K   75 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGG--CSSSEEEEECCTTCHHHHHHHHT-------T
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhh--ccCCeEEEECCCCCHHHHHHHhh-------c
Confidence            67999999999999999999999  8999999997531 11111111  12468889999999998877765       5


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcC-----------------
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ-----------------  152 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~-----------------  152 (226)
                      +|+|||+||...     .+.+.+++++.+++|+.++.++++++.+.   +.+||++||.+.+.                 
T Consensus        76 ~d~vih~A~~~~-----~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~~~~v~~SS~~vyg~~~~~~~~~~~~~~~~~  147 (348)
T 1oc2_A           76 ADAIVHYAAESH-----NDNSLNDPSPFIHTNFIGTYTLLEAARKY---DIRFHHVSTDEVYGDLPLREDLPGHGEGPGE  147 (348)
T ss_dssp             CSEEEECCSCCC-----HHHHHHCCHHHHHHHTHHHHHHHHHHHHH---TCEEEEEEEGGGGCCBCCGGGSTTTTCSTTS
T ss_pred             CCEEEECCcccC-----ccchhhCHHHHHHHHHHHHHHHHHHHHHh---CCeEEEecccceeCCCcccccccccccccCC
Confidence            699999999753     12344567889999999999999999886   34999999976431                 


Q ss_pred             ------CCCCCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCcc
Q 027248          153 ------PQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFA  197 (226)
Q Consensus       153 ------~~~~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~  197 (226)
                            +.++...|+.||++.+.+++.++.++  +++++.+.||.+.+|..
T Consensus       148 ~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--gi~~~ilrp~~v~G~~~  196 (348)
T 1oc2_A          148 KFTAETNYNPSSPYSSTKAASDLIVKAWVRSF--GVKATISNCSNNYGPYQ  196 (348)
T ss_dssp             SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH--CCEEEEEEECCEESTTC
T ss_pred             CcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh--CCCEEEEeeceeeCCCC
Confidence                  23456789999999999999999887  79999999999998864

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.87  E-value=8.1e-22  Score=162.57  Aligned_cols=164  Identities=17%  Similarity=0.091  Sum_probs=129.6

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCEE
Q 027248           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVV   93 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~l   93 (226)
                      +++||||+|+||++++++|+++|++|++++|.......      .....+.++.+|+++++++++++++.     .+|++
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~------~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~v   70 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRE------NVPKGVPFFRVDLRDKEGVERAFREF-----RPTHV   70 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGG------GSCTTCCEECCCTTCHHHHHHHHHHH-----CCSEE
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchh------hcccCeEEEECCCCCHHHHHHHHHhc-----CCCEE
Confidence            58999999999999999999999999999985432111      01124567889999999988877642     79999


Q ss_pred             EEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEecc-CCcC------------CCCCCchh
Q 027248           94 VSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI-AGYQ------------PQSSMAMY  160 (226)
Q Consensus        94 i~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~-~~~~------------~~~~~~~Y  160 (226)
                      ||+||....     ..+.+++++.+++|+.+++++++++...  ..++||++||. ..+.            +..+...|
T Consensus        71 i~~a~~~~~-----~~~~~~~~~~~~~N~~g~~~l~~a~~~~--~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~~Y  143 (311)
T 2p5y_A           71 SHQAAQASV-----KVSVEDPVLDFEVNLLGGLNLLEACRQY--GVEKLVFASTGGAIYGEVPEGERAEETWPPRPKSPY  143 (311)
T ss_dssp             EECCSCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHT--TCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCSHH
T ss_pred             EECccccCc-----hhhhhCHHHHHHHHHHHHHHHHHHHHHh--CCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCChH
Confidence            999997431     2345678899999999999999998753  23599999998 2211            11246789


Q ss_pred             hHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCcc
Q 027248          161 GVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFA  197 (226)
Q Consensus       161 ~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~  197 (226)
                      +.||++++.+++.++.++  +++++.+.||.+.+|..
T Consensus       144 ~~sK~~~e~~~~~~~~~~--~~~~~~lrp~~v~Gp~~  178 (311)
T 2p5y_A          144 AASKAAFEHYLSVYGQSY--GLKWVSLRYGNVYGPRQ  178 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHH--CCCEEEEEECEEECTTC
T ss_pred             HHHHHHHHHHHHHHHHHc--CCCEEEEeeccccCcCC
Confidence            999999999999999886  79999999999998854

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.87  E-value=2.1e-21  Score=164.64  Aligned_cols=167  Identities=17%  Similarity=0.057  Sum_probs=134.0

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      .++++++||||+|+||++++++|+++|++|++++|+..+....      ....+.++.+|+++.++++++++       .
T Consensus        27 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~v~~~~~Dl~d~~~~~~~~~-------~   93 (379)
T 2c5a_A           27 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE------DMFCDEFHLVDLRVMENCLKVTE-------G   93 (379)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG------GGTCSEEEECCTTSHHHHHHHHT-------T
T ss_pred             ccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh------ccCCceEEECCCCCHHHHHHHhC-------C
Confidence            3568999999999999999999999999999999987653211      12356788999999998877764       8


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcC-----------------
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ-----------------  152 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~-----------------  152 (226)
                      +|+|||+||.... ..   ...+++++.+++|+.++.++++++...  ..++||++||...+.                 
T Consensus        94 ~d~Vih~A~~~~~-~~---~~~~~~~~~~~~Nv~g~~~ll~a~~~~--~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~  167 (379)
T 2c5a_A           94 VDHVFNLAADMGG-MG---FIQSNHSVIMYNNTMISFNMIEAARIN--GIKRFFYASSACIYPEFKQLETTNVSLKESDA  167 (379)
T ss_dssp             CSEEEECCCCCCC-HH---HHTTCHHHHHHHHHHHHHHHHHHHHHT--TCSEEEEEEEGGGSCGGGSSSSSSCEECGGGG
T ss_pred             CCEEEECceecCc-cc---ccccCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEeehheeCCCCCCCccCCCcCcccC
Confidence            9999999997531 11   113457889999999999999999754  235999999986543                 


Q ss_pred             -CCCCCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCcc
Q 027248          153 -PQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFA  197 (226)
Q Consensus       153 -~~~~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~  197 (226)
                       +..+...|+.+|++.+.+++.++.++  +++++.+.||++.+|..
T Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--gi~~~ilrp~~v~G~~~  211 (379)
T 2c5a_A          168 WPAEPQDAFGLEKLATEELCKHYNKDF--GIECRIGRFHNIYGPFG  211 (379)
T ss_dssp             SSBCCSSHHHHHHHHHHHHHHHHHHHH--CCEEEEEEECCEECTTS
T ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHH--CCCEEEEEeCceeCcCC
Confidence             23346789999999999999998876  79999999999998754

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.87  E-value=4.4e-21  Score=162.52  Aligned_cols=157  Identities=18%  Similarity=0.114  Sum_probs=124.0

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcch-----HHHHHHHHHhcCC-cEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN-----VDEAVVKLKARGI-EVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~-----~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      |+++||||+|+||.+++++|+++|++|++++|+.++     ++....+....+. .+.++.+|+++.++++++++..   
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---  105 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI---  105 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH---
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhc---
Confidence            789999999999999999999999999999998754     2222222211123 6788899999999988888765   


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc---CCEEEEEeccCCcC----------C
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQ----------P  153 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~---~~~iv~~sS~~~~~----------~  153 (226)
                        ++|+|||+||....     ..+.++++..+++|+.++.++++++.+...+   .++||++||...+.          +
T Consensus       106 --~~d~Vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~E~~~  178 (381)
T 1n7h_A          106 --KPDEVYNLAAQSHV-----AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTP  178 (381)
T ss_dssp             --CCSEEEECCSCCCH-----HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSC
T ss_pred             --CCCEEEECCcccCc-----cccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCCCCCCC
Confidence              79999999997531     2345678899999999999999999987643   46999999987543          2


Q ss_pred             CCCCchhhHhHHHHHHHHHHHHHHhC
Q 027248          154 QSSMAMYGVTKTALLGLTKALAAEMA  179 (226)
Q Consensus       154 ~~~~~~Y~~sKaa~~~~~~~la~e~~  179 (226)
                      ..+...|+.+|++.+.+++.++.++.
T Consensus       179 ~~~~~~Y~~sK~~~E~~~~~~~~~~~  204 (381)
T 1n7h_A          179 FHPRSPYAASKCAAHWYTVNYREAYG  204 (381)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHhC
Confidence            34567899999999999999998874

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.87  E-value=3.9e-21  Score=159.85  Aligned_cols=171  Identities=12%  Similarity=-0.057  Sum_probs=131.1

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHH-HHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVD-EAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      .+++|+||||+|+||++++++|+++|++|++++|+.+... ...+.+ .....+.++.+|+++.++++++++..     +
T Consensus        13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~   86 (335)
T 1rpn_A           13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLREL-GIEGDIQYEDGDMADACSVQRAVIKA-----Q   86 (335)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHT-TCGGGEEEEECCTTCHHHHHHHHHHH-----C
T ss_pred             cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhc-cccCceEEEECCCCCHHHHHHHHHHc-----C
Confidence            4689999999999999999999999999999999876421 111111 12346788899999999988887755     7


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCC-----------CCCc
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQ-----------SSMA  158 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~-----------~~~~  158 (226)
                      +|+|||+||....     ..+.+++++.+++|+.++.++++++.+.-. .+++|++||.+.+...           .+..
T Consensus        87 ~d~Vih~A~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~~  160 (335)
T 1rpn_A           87 PQEVYNLAAQSFV-----GASWNQPVTTGVVDGLGVTHLLEAIRQFSP-ETRFYQASTSEMFGLIQAERQDENTPFYPRS  160 (335)
T ss_dssp             CSEEEECCSCCCH-----HHHTTSHHHHHHHHTHHHHHHHHHHHHHCT-TSEEEEEEEGGGGCSCSSSSBCTTSCCCCCS
T ss_pred             CCEEEECccccch-----hhhhhChHHHHHHHHHHHHHHHHHHHHhCC-CCeEEEEeCHHHhCCCCCCCCCcccCCCCCC
Confidence            9999999996431     122345688999999999999999976411 2699999998665322           2356


Q ss_pred             hhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCC
Q 027248          159 MYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTH  195 (226)
Q Consensus       159 ~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~  195 (226)
                      .|+.||++.+.+++.++.++  ++.+..+.|+.+..|
T Consensus       161 ~Y~~sK~~~e~~~~~~~~~~--~~~~~i~r~~~v~Gp  195 (335)
T 1rpn_A          161 PYGVAKLYGHWITVNYRESF--GLHASSGILFNHESP  195 (335)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH--CCCEEEEEECCEECT
T ss_pred             hhHHHHHHHHHHHHHHHHHc--CCcEEEEeeCcccCC
Confidence            89999999999999998876  566777888777655

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.87  E-value=2.6e-21  Score=161.67  Aligned_cols=174  Identities=14%  Similarity=0.063  Sum_probs=129.8

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCC--CeEEEEecCcchH-HHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEG--ASVVVSSRKQKNV-DEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g--~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      ...+++|+||||+|+||.+++++|+++|  ++|+..+|..... ......+ .....+.++.+|++++++++++++..  
T Consensus        21 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~--   97 (346)
T 4egb_A           21 QSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSI-QDHPNYYFVKGEIQNGELLEHVIKER--   97 (346)
T ss_dssp             ---CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTT-TTCTTEEEEECCTTCHHHHHHHHHHH--
T ss_pred             ccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhh-ccCCCeEEEEcCCCCHHHHHHHHhhc--
Confidence            3567899999999999999999999999  6677777764211 1111111 11246889999999999998888753  


Q ss_pred             HhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCC-----------
Q 027248           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQ-----------  154 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~-----------  154 (226)
                         ++|+|||+||....     ..+.+++++.+++|+.++.++++++...  ..+++|++||...+...           
T Consensus        98 ---~~d~Vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~~--~~~~~v~~SS~~vy~~~~~~~~~~E~~~  167 (346)
T 4egb_A           98 ---DVQVIVNFAAESHV-----DRSIENPIPFYDTNVIGTVTLLELVKKY--PHIKLVQVSTDEVYGSLGKTGRFTEETP  167 (346)
T ss_dssp             ---TCCEEEECCCCC--------------CHHHHHHTHHHHHHHHHHHHS--TTSEEEEEEEGGGGCCCCSSCCBCTTSC
T ss_pred             ---CCCEEEECCcccch-----hhhhhCHHHHHHHHHHHHHHHHHHHHhc--CCCEEEEeCchHHhCCCCcCCCcCCCCC
Confidence               79999999997642     1245677889999999999999999775  23589999998655332           


Q ss_pred             -CCCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCcc
Q 027248          155 -SSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFA  197 (226)
Q Consensus       155 -~~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~  197 (226)
                       .+...|+.+|.+.+.+++.++.+.  +++++.+.|+.+..|..
T Consensus       168 ~~p~~~Y~~sK~~~E~~~~~~~~~~--g~~~~ilRp~~v~G~~~  209 (346)
T 4egb_A          168 LAPNSPYSSSKASADMIALAYYKTY--QLPVIVTRCSNNYGPYQ  209 (346)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHH--CCCEEEEEECEEESTTC
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHh--CCCEEEEeecceeCcCC
Confidence             234789999999999999998886  78999999999988753

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.87  E-value=8.5e-22  Score=162.32  Aligned_cols=162  Identities=22%  Similarity=0.127  Sum_probs=131.0

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCE
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~   92 (226)
                      ++++||||+|+||++++++|+++|++|++++|+.+......      ...+.++.+|+++.+ +.++++       . |+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------~~~~~~~~~Dl~d~~-~~~~~~-------~-d~   65 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV------NPSAELHVRDLKDYS-WGAGIK-------G-DV   65 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS------CTTSEEECCCTTSTT-TTTTCC-------C-SE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc------CCCceEEECccccHH-HHhhcC-------C-CE
Confidence            36999999999999999999999999999999876533221      345778899999987 655443       3 99


Q ss_pred             EEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcC-----------CCCCCchhh
Q 027248           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ-----------PQSSMAMYG  161 (226)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~-----------~~~~~~~Y~  161 (226)
                      |||+||...     ...+.++++..+++|+.++.++++++...  ..++||++||...+.           +..+...|+
T Consensus        66 vih~A~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~  138 (312)
T 3ko8_A           66 VFHFAANPE-----VRLSTTEPIVHFNENVVATFNVLEWARQT--GVRTVVFASSSTVYGDADVIPTPEEEPYKPISVYG  138 (312)
T ss_dssp             EEECCSSCS-----SSGGGSCHHHHHHHHHHHHHHHHHHHHHH--TCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHH
T ss_pred             EEECCCCCC-----chhhhhCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCChHH
Confidence            999999643     12445667889999999999999998654  245999999987652           234567899


Q ss_pred             HhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCccc
Q 027248          162 VTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAE  198 (226)
Q Consensus       162 ~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~~  198 (226)
                      .||++.+.+++.++.++  +++++.+.||.+.+|...
T Consensus       139 ~sK~~~e~~~~~~~~~~--g~~~~~lrp~~v~g~~~~  173 (312)
T 3ko8_A          139 AAKAAGEVMCATYARLF--GVRCLAVRYANVVGPRLR  173 (312)
T ss_dssp             HHHHHHHHHHHHHHHHH--CCEEEEEEECEEECTTCC
T ss_pred             HHHHHHHHHHHHHHHHh--CCCEEEEeeccccCcCCC
Confidence            99999999999999987  899999999999988643

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.87  E-value=3.2e-21  Score=160.65  Aligned_cols=166  Identities=17%  Similarity=0.075  Sum_probs=131.4

Q ss_pred             EEEEEcCCCchhHHHHHHHHhC---C---CeEEEEecCcc--hHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248           14 VAIVTASTQGIGFGIAERLGLE---G---ASVVVSSRKQK--NVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~---g---~~v~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      +++||||+|+||++++++|+++   |   ++|++++|+..  ..+.. .++. ...++.++.+|+++++++++++     
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~d~~~~~~~~-----   74 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANL-APVD-ADPRLRFVHGDIRDAGLLAREL-----   74 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGG-GGGT-TCTTEEEEECCTTCHHHHHHHT-----
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhh-hhcc-cCCCeEEEEcCCCCHHHHHHHh-----
Confidence            4899999999999999999997   8   89999999652  11111 1111 1346888999999998877765     


Q ss_pred             HhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcC-----------CC
Q 027248           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ-----------PQ  154 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~-----------~~  154 (226)
                        +++|+|||+||....     +.+.+++++.+++|+.++.++++++.+..  .++||++||.+.+.           +.
T Consensus        75 --~~~d~Vih~A~~~~~-----~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~--~~~~v~~SS~~vyg~~~~~~~~E~~~~  145 (337)
T 1r6d_A           75 --RGVDAIVHFAAESHV-----DRSIAGASVFTETNVQGTQTLLQCAVDAG--VGRVVHVSTNQVYGSIDSGSWTESSPL  145 (337)
T ss_dssp             --TTCCEEEECCSCCCH-----HHHHHCCHHHHHHHTHHHHHHHHHHHHTT--CCEEEEEEEGGGGCCCSSSCBCTTSCC
T ss_pred             --cCCCEEEECCCccCc-----hhhhhCHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEecchHHhCCCCCCCCCCCCCC
Confidence              489999999997531     23345678899999999999999998863  35999999976432           23


Q ss_pred             CCCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCcc
Q 027248          155 SSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFA  197 (226)
Q Consensus       155 ~~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~  197 (226)
                      .+...|+.||++.+.+++.++.++  +++++.+.||.+.+|..
T Consensus       146 ~~~~~Y~~sK~~~e~~~~~~~~~~--g~~~~ilrp~~v~G~~~  186 (337)
T 1r6d_A          146 EPNSPYAASKAGSDLVARAYHRTY--GLDVRITRCCNNYGPYQ  186 (337)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHH--CCCEEEEEECEEECTTC
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHH--CCCEEEEEeeeeECCCC
Confidence            456789999999999999999886  78999999999998764

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.86  E-value=9.8e-22  Score=162.26  Aligned_cols=154  Identities=19%  Similarity=0.167  Sum_probs=96.2

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id   91 (226)
                      +|+++||||+|+||++++++|+++|++|++++|+.+.         .   .  ++.+|++++++++++++..     ++|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~---------~---~--~~~~Dl~d~~~~~~~~~~~-----~~d   62 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR---------P---K--FEQVNLLDSNAVHHIIHDF-----QPH   62 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC--------------------------------CHHHHHHH-----CCS
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC---------C---C--eEEecCCCHHHHHHHHHhh-----CCC
Confidence            5789999999999999999999999999999987643         0   1  5778999999888887754     799


Q ss_pred             EEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCC----------CCCCchhh
Q 027248           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP----------QSSMAMYG  161 (226)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~----------~~~~~~Y~  161 (226)
                      +|||+||....     ..+.+++++.+++|+.++.++++++.+.   +.++|++||...+.+          ..+...|+
T Consensus        63 ~vih~A~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~v~~SS~~v~~~~~~~~~E~~~~~~~~~Y~  134 (315)
T 2ydy_A           63 VIVHCAAERRP-----DVVENQPDAASQLNVDASGNLAKEAAAV---GAFLIYISSDYVFDGTNPPYREEDIPAPLNLYG  134 (315)
T ss_dssp             EEEECC------------------------CHHHHHHHHHHHHH---TCEEEEEEEGGGSCSSSCSBCTTSCCCCCSHHH
T ss_pred             EEEECCcccCh-----hhhhcCHHHHHHHHHHHHHHHHHHHHHc---CCeEEEEchHHHcCCCCCCCCCCCCCCCcCHHH
Confidence            99999997531     1245678999999999999999999874   359999999986543          34567899


Q ss_pred             HhHHHHHHHHHHHHHHhCCCeEEEEEecCceeC
Q 027248          162 VTKTALLGLTKALAAEMAPDTRVNCVAPGFVPT  194 (226)
Q Consensus       162 ~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t  194 (226)
                      .+|++.+.+++.++.++ ..+|++.|. |..++
T Consensus       135 ~sK~~~e~~~~~~~~~~-~~lR~~~v~-G~~~~  165 (315)
T 2ydy_A          135 KTKLDGEKAVLENNLGA-AVLRIPILY-GEVEK  165 (315)
T ss_dssp             HHHHHHHHHHHHHCTTC-EEEEECSEE-CSCSS
T ss_pred             HHHHHHHHHHHHhCCCe-EEEeeeeee-CCCCc
Confidence            99999999999875432 145555555 54444

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.86  E-value=1.2e-20  Score=156.55  Aligned_cols=164  Identities=18%  Similarity=0.139  Sum_probs=132.0

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCE
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~   92 (226)
                      ++++||||+|+||++++++|+++|++|++++|+......   .+   ...+.++.+|+++.+++++++++     .++|+
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~---~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   70 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHED---AI---TEGAKFYNGDLRDKAFLRDVFTQ-----ENIEA   70 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG---GS---CTTSEEEECCTTCHHHHHHHHHH-----SCEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchh---hc---CCCcEEEECCCCCHHHHHHHHhh-----cCCCE
Confidence            569999999999999999999999999999997654321   11   12577889999999998887764     48999


Q ss_pred             EEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCC-----------CCCCchhh
Q 027248           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP-----------QSSMAMYG  161 (226)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~-----------~~~~~~Y~  161 (226)
                      |||+||....     ..+.+++++.+++|+.++.++++++...  +.+++|++||...+..           ..+...|+
T Consensus        71 vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~Y~  143 (330)
T 2c20_A           71 VMHFAADSLV-----GVSMEKPLQYYNNNVYGALCLLEVMDEF--KVDKFIFSSTAATYGEVDVDLITEETMTNPTNTYG  143 (330)
T ss_dssp             EEECCCCCCH-----HHHHHSHHHHHHHHHHHHHHHHHHHHHT--TCCEEEEECCGGGGCSCSSSSBCTTSCCCCSSHHH
T ss_pred             EEECCcccCc-----cccccCHHHHHHHHhHHHHHHHHHHHHc--CCCEEEEeCCceeeCCCCCCCCCcCCCCCCCChHH
Confidence            9999997531     1245677899999999999999988653  2358999999876432           23467899


Q ss_pred             HhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCc
Q 027248          162 VTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHF  196 (226)
Q Consensus       162 ~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~  196 (226)
                      .+|++.+.+++.++.++  +++++.+.|+.+..+.
T Consensus       144 ~sK~~~e~~~~~~~~~~--~~~~~ilrp~~v~G~~  176 (330)
T 2c20_A          144 ETKLAIEKMLHWYSQAS--NLRYKIFRYFNVAGAT  176 (330)
T ss_dssp             HHHHHHHHHHHHHHHTS--SCEEEEEECSEEECCC
T ss_pred             HHHHHHHHHHHHHHHHh--CCcEEEEecCcccCCC
Confidence            99999999999998876  8999999999988774

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.86  E-value=1.8e-20  Score=156.14  Aligned_cols=167  Identities=17%  Similarity=0.176  Sum_probs=125.8

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHh-cCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCE
Q 027248           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA-RGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~   92 (226)
                      +++||||+|+||++++++|+++|++|++++|.........+++.+ .+.++.++.+|++++++++++++.     .++|+
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~~D~   76 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHD-----HAIDT   76 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHH-----TTCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhc-----cCCCE
Confidence            589999999999999999999999999998754321122222222 134577889999999998887764     26999


Q ss_pred             EEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcC-----------CC-CCCchh
Q 027248           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ-----------PQ-SSMAMY  160 (226)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~-----------~~-~~~~~Y  160 (226)
                      |||+||... ..    .+.+++.+.+++|+.+++++++++...  ..++||++||.+.+.           +. ++...|
T Consensus        77 vih~A~~~~-~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~~Y  149 (338)
T 1udb_A           77 VIHFAGLKA-VG----ESVQKPLEYYDNNVNGTLRLISAMRAA--NVKNFIFSSSATVYGDNPKIPYVESFPTGTPQSPY  149 (338)
T ss_dssp             EEECCSCCC-HH----HHHHCHHHHHHHHHHHHHHHHHHHHHH--TCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHH
T ss_pred             EEECCccCc-cc----cchhcHHHHHHHHHHHHHHHHHHHHhc--CCCeEEEEccHHHhCCCCCCCcCcccCCCCCCChH
Confidence            999999753 11    123456788999999999999876542  236999999986542           11 236789


Q ss_pred             hHhHHHHHHHHHHHHHHhCCCeEEEEEecCcee
Q 027248          161 GVTKTALLGLTKALAAEMAPDTRVNCVAPGFVP  193 (226)
Q Consensus       161 ~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~  193 (226)
                      +.||++++.+++.++.+. +++++..+.|+.+-
T Consensus       150 ~~sK~~~e~~~~~~~~~~-~~~~~~ilR~~~v~  181 (338)
T 1udb_A          150 GKSKLMVEQILTDLQKAQ-PDWSIALLRYFNPV  181 (338)
T ss_dssp             HHHHHHHHHHHHHHHHHS-TTCEEEEEEECEEE
T ss_pred             HHHHHHHHHHHHHHHHhc-CCCceEEEeeceec
Confidence            999999999999999884 47888888876554

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.86  E-value=9.1e-23  Score=159.41  Aligned_cols=152  Identities=13%  Similarity=0.091  Sum_probs=123.3

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCC--eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      .+++++||||+|+||++++++|+++|+  +|++++|++++          ....+.++.+|+++++++++++        
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~----------~~~~~~~~~~D~~~~~~~~~~~--------   65 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------EHPRLDNPVGPLAELLPQLDGS--------   65 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------CCTTEECCBSCHHHHGGGCCSC--------
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc----------cCCCceEEeccccCHHHHHHhh--------
Confidence            358899999999999999999999998  99999999875          1245777888998877655443        


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHhHHHHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALL  168 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~  168 (226)
                       +|+|||+||...       .+.+++++.+++|+.++..+++++.+.  ..+++|++||.....  ++...|+.+|++++
T Consensus        66 -~d~vi~~a~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~--~~~~~y~~sK~~~e  133 (215)
T 2a35_A           66 -IDTAFCCLGTTI-------KEAGSEEAFRAVDFDLPLAVGKRALEM--GARHYLVVSALGADA--KSSIFYNRVKGELE  133 (215)
T ss_dssp             -CSEEEECCCCCH-------HHHSSHHHHHHHHTHHHHHHHHHHHHT--TCCEEEEECCTTCCT--TCSSHHHHHHHHHH
T ss_pred             -hcEEEECeeecc-------ccCCCHHHHHHhhHHHHHHHHHHHHHc--CCCEEEEECCcccCC--CCccHHHHHHHHHH
Confidence             899999999643       123467889999999999999998764  235899999988764  34568999999999


Q ss_pred             HHHHHHHHHhCCCeE-EEEEecCceeCCccc
Q 027248          169 GLTKALAAEMAPDTR-VNCVAPGFVPTHFAE  198 (226)
Q Consensus       169 ~~~~~la~e~~~~i~-v~~v~Pg~v~t~~~~  198 (226)
                      .+++.+      +++ ++.+.||++.++...
T Consensus       134 ~~~~~~------~~~~~~~vrp~~v~g~~~~  158 (215)
T 2a35_A          134 QALQEQ------GWPQLTIARPSLLFGPREE  158 (215)
T ss_dssp             HHHTTS------CCSEEEEEECCSEESTTSC
T ss_pred             HHHHHc------CCCeEEEEeCceeeCCCCc
Confidence            887642      788 999999999988543

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.86  E-value=7.4e-21  Score=158.44  Aligned_cols=161  Identities=19%  Similarity=0.079  Sum_probs=121.4

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      .+++++++||||+|+||++++++|+++|++|++++|+.........+    ..++.++.+|++++++++++++.     +
T Consensus        18 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~----~~~~~~~~~Dl~d~~~~~~~~~~-----~   88 (333)
T 2q1w_A           18 GSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKD----HPNLTFVEGSIADHALVNQLIGD-----L   88 (333)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCC----CTTEEEEECCTTCHHHHHHHHHH-----H
T ss_pred             cCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhh----cCCceEEEEeCCCHHHHHHHHhc-----c
Confidence            45678999999999999999999999999999999986432111110    13578899999999998888764     2


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcC----CC--------CC
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ----PQ--------SS  156 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~----~~--------~~  156 (226)
                      ++|+|||+||.... .     +.++++  +++|+.++.++++++.+.  ..++||++||...+.    ..        .+
T Consensus        89 ~~D~vih~A~~~~~-~-----~~~~~~--~~~N~~~~~~l~~a~~~~--~~~~iV~~SS~~~~g~~~~~~~~~~~E~~~p  158 (333)
T 2q1w_A           89 QPDAVVHTAASYKD-P-----DDWYND--TLTNCVGGSNVVQAAKKN--NVGRFVYFQTALCYGVKPIQQPVRLDHPRNP  158 (333)
T ss_dssp             CCSEEEECCCCCSC-T-----TCHHHH--HHHHTHHHHHHHHHHHHT--TCSEEEEEEEGGGGCSCCCSSSBCTTSCCCC
T ss_pred             CCcEEEECceecCC-C-----ccCChH--HHHHHHHHHHHHHHHHHh--CCCEEEEECcHHHhCCCcccCCCCcCCCCCC
Confidence            79999999997642 1     234444  899999999999999874  346999999987653    21        23


Q ss_pred             C-chhhHhHHHHHHHHHH-HHHHhCCCeEEEEEecCceeCC
Q 027248          157 M-AMYGVTKTALLGLTKA-LAAEMAPDTRVNCVAPGFVPTH  195 (226)
Q Consensus       157 ~-~~Y~~sKaa~~~~~~~-la~e~~~~i~v~~v~Pg~v~t~  195 (226)
                      . ..|+.+|++++.+++. ++       ++..+.|+.+..|
T Consensus       159 ~~~~Y~~sK~~~E~~~~~s~~-------~~~ilR~~~v~gp  192 (333)
T 2q1w_A          159 ANSSYAISKSANEDYLEYSGL-------DFVTFRLANVVGP  192 (333)
T ss_dssp             TTCHHHHHHHHHHHHHHHHTC-------CEEEEEESEEEST
T ss_pred             CCCchHHHHHHHHHHHHhhhC-------CeEEEeeceEECc
Confidence            3 7899999999999987 65       3455666655544

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.86  E-value=5.4e-22  Score=165.38  Aligned_cols=170  Identities=16%  Similarity=0.103  Sum_probs=124.6

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHH--HHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEA--VVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~--~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      +|+++||||+|+||++++++|+++|++|+++.|+.++.+..  ...+. ...++.++.+|++++++++++++       .
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~-------~   80 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQ-ELGDLKIFRADLTDELSFEAPIA-------G   80 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHG-GGSCEEEEECCTTTSSSSHHHHT-------T
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcC-CCCcEEEEecCCCChHHHHHHHc-------C
Confidence            68999999999999999999999999999999987643211  12222 23457788999999988776654       6


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcC-----CC----------
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ-----PQ----------  154 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~-----~~----------  154 (226)
                      +|+|||+||... .   .  ..+..++.+++|+.|++++++++.+.. .-++||++||.++..     +.          
T Consensus        81 ~D~Vih~A~~~~-~---~--~~~~~~~~~~~nv~gt~~ll~aa~~~~-~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~  153 (338)
T 2rh8_A           81 CDFVFHVATPVH-F---A--SEDPENDMIKPAIQGVVNVMKACTRAK-SVKRVILTSSAAAVTINQLDGTGLVVDEKNWT  153 (338)
T ss_dssp             CSEEEEESSCCC-C--------------CHHHHHHHHHHHHHHHHCT-TCCEEEEECCHHHHHHHHHTCSCCCCCTTTTT
T ss_pred             CCEEEEeCCccC-C---C--CCCcHHHHHHHHHHHHHHHHHHHHHcC-CcCEEEEEecHHHeecCCcCCCCcccChhhcc
Confidence            899999998642 1   1  112224589999999999999998753 135999999976311     00          


Q ss_pred             ------C---CCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCccc
Q 027248          155 ------S---SMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAE  198 (226)
Q Consensus       155 ------~---~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~~  198 (226)
                            +   ....|+.||++.+.+++.++.+.  |++++.+.||.+.+|...
T Consensus       154 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--gi~~~~lrp~~v~Gp~~~  204 (338)
T 2rh8_A          154 DIEFLTSAKPPTWGYPASKTLAEKAAWKFAEEN--NIDLITVIPTLMAGSSLT  204 (338)
T ss_dssp             CC-------CCCCCCTTSCCHHHHHHHHHHHHH--TCCEEEEEECEEESCCSS
T ss_pred             chhhccccCCccchHHHHHHHHHHHHHHHHHHc--CCcEEEEeCCceECCCCC
Confidence                  0   11259999999999888877654  799999999999998643

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.85  E-value=3.5e-21  Score=153.09  Aligned_cols=169  Identities=9%  Similarity=0.047  Sum_probs=112.0

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCC-CeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEG-ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      .|+++||||+|+||++++++|+++| ++|++++|++++++..      ....+.++.+|++++++++++++       .+
T Consensus        23 mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~------~~~~~~~~~~Dl~d~~~~~~~~~-------~~   89 (236)
T 3qvo_A           23 MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP------YPTNSQIIMGDVLNHAALKQAMQ-------GQ   89 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS------CCTTEEEEECCTTCHHHHHHHHT-------TC
T ss_pred             ccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc------ccCCcEEEEecCCCHHHHHHHhc-------CC
Confidence            4789999999999999999999999 8999999998764331      12368889999999999888776       78


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCc---------h
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMA---------M  159 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~---------~  159 (226)
                      |+||||+|...         .   .           ..++.+++.+++  .++||++||..++.+.++..         .
T Consensus        90 D~vv~~a~~~~---------~---~-----------~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~~~~  146 (236)
T 3qvo_A           90 DIVYANLTGED---------L---D-----------IQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAVIGE  146 (236)
T ss_dssp             SEEEEECCSTT---------H---H-----------HHHHHHHHHHHHTTCCEEEEECCCCC----------------CG
T ss_pred             CEEEEcCCCCc---------h---h-----------HHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhcccc
Confidence            99999998521         0   0           123455666643  36999999998765544321         1


Q ss_pred             hhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          160 YGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       160 Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +...+...+       ..+.+ +|+++.|+||++.++........  ........++..|+|+|+++
T Consensus       147 ~~~~~~~~~-------~~l~~~gi~~~~vrPg~i~~~~~~~~~~~--~~~~~~~~~~i~~~DvA~~i  204 (236)
T 3qvo_A          147 PLKPFRRAA-------DAIEASGLEYTILRPAWLTDEDIIDYELT--SRNEPFKGTIVSRKSVAALI  204 (236)
T ss_dssp             GGHHHHHHH-------HHHHTSCSEEEEEEECEEECCSCCCCEEE--CTTSCCSCSEEEHHHHHHHH
T ss_pred             hHHHHHHHH-------HHHHHCCCCEEEEeCCcccCCCCcceEEe--ccCCCCCCcEECHHHHHHHH
Confidence            112222111       11224 99999999999998754432110  01111224567899998865

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.85  E-value=6.1e-21  Score=157.44  Aligned_cols=160  Identities=19%  Similarity=0.189  Sum_probs=125.8

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCE
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~   92 (226)
                      |+++||||+|+||++++++|+++|..|++..|+....+.       ....+.++.+|+++ +++.++++       .+|+
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~-------~~~~~~~~~~Dl~~-~~~~~~~~-------~~d~   66 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEF-------VNEAARLVKADLAA-DDIKDYLK-------GAEE   66 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGG-------SCTTEEEECCCTTT-SCCHHHHT-------TCSE
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhh-------cCCCcEEEECcCCh-HHHHHHhc-------CCCE
Confidence            469999999999999999999999555555555443221       13457889999998 77766654       8999


Q ss_pred             EEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcC-----------CCCCCchhh
Q 027248           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ-----------PQSSMAMYG  161 (226)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~-----------~~~~~~~Y~  161 (226)
                      +||+|+...     ...+.+++++.+++|+.++.++++++...  ..+++|++||...+.           +..+...|+
T Consensus        67 vih~a~~~~-----~~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~  139 (313)
T 3ehe_A           67 VWHIAANPD-----VRIGAENPDEIYRNNVLATYRLLEAMRKA--GVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYG  139 (313)
T ss_dssp             EEECCCCCC-----CC-CCCCHHHHHHHHHHHHHHHHHHHHHH--TCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHHH
T ss_pred             EEECCCCCC-----hhhhhhCHHHHHHHHHHHHHHHHHHHHHc--CCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHHH
Confidence            999999643     12345567899999999999999987653  346999999987652           344577899


Q ss_pred             HhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCc
Q 027248          162 VTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHF  196 (226)
Q Consensus       162 ~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~  196 (226)
                      .||++.+.+++.++.++  +++++.+.|+.+..|.
T Consensus       140 ~sK~~~e~~~~~~~~~~--g~~~~ilRp~~v~G~~  172 (313)
T 3ehe_A          140 ASKLACEALIESYCHTF--DMQAWIYRFANVIGRR  172 (313)
T ss_dssp             HHHHHHHHHHHHHHHHT--TCEEEEEECSCEESTT
T ss_pred             HHHHHHHHHHHHHHHhc--CCCEEEEeeccccCcC
Confidence            99999999999999887  8999999999998874

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.85  E-value=3.2e-20  Score=145.86  Aligned_cols=178  Identities=13%  Similarity=0.078  Sum_probs=125.3

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCEE
Q 027248           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVV   93 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~l   93 (226)
                      +++||||+|+||++++++|+++|++|++++|++++++...      ...+.++.+|++++++         +.++.+|+|
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~------~~~~~~~~~D~~d~~~---------~~~~~~d~v   66 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL------GATVATLVKEPLVLTE---------ADLDSVDAV   66 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT------CTTSEEEECCGGGCCH---------HHHTTCSEE
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccccc------CCCceEEecccccccH---------hhcccCCEE
Confidence            3999999999999999999999999999999987654321      2467889999999987         234589999


Q ss_pred             EEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCC--------------Cch
Q 027248           94 VSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSS--------------MAM  159 (226)
Q Consensus        94 i~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~--------------~~~  159 (226)
                      |||||......            ...+|+.++.++++++...   ++++|++||.++..+.+.              ...
T Consensus        67 i~~ag~~~~~~------------~~~~n~~~~~~l~~a~~~~---~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (224)
T 3h2s_A           67 VDALSVPWGSG------------RGYLHLDFATHLVSLLRNS---DTLAVFILGSASLAMPGADHPMILDFPESAASQPW  131 (224)
T ss_dssp             EECCCCCTTSS------------CTHHHHHHHHHHHHTCTTC---CCEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTT
T ss_pred             EECCccCCCcc------------hhhHHHHHHHHHHHHHHHc---CCcEEEEecceeeccCCCCccccccCCCCCccchh
Confidence            99999862111            1356888877777766543   379999999876554433              678


Q ss_pred             hhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCccccccc--CchhhhhhccCCCCCchhhhccc
Q 027248          160 YGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS--NDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       160 Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~--~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      |+.+|++.+.+ +.+.   .. +++++.+.||++.++.......  ...+...-....++.++|+|+++
T Consensus       132 y~~sK~~~e~~-~~~~---~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~~  196 (224)
T 3h2s_A          132 YDGALYQYYEY-QFLQ---MNANVNWIGISPSEAFPSGPATSYVAGKDTLLVGEDGQSHITTGNMALAI  196 (224)
T ss_dssp             HHHHHHHHHHH-HHHT---TCTTSCEEEEEECSBCCCCCCCCEEEESSBCCCCTTSCCBCCHHHHHHHH
T ss_pred             hHHHHHHHHHH-HHHH---hcCCCcEEEEcCccccCCCcccCceecccccccCCCCCceEeHHHHHHHH
Confidence            99999998854 2222   23 8999999999998872211100  00000011123468888888764

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.85  E-value=6.9e-21  Score=153.94  Aligned_cols=177  Identities=15%  Similarity=0.178  Sum_probs=129.2

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCEE
Q 027248           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVV   93 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~l   93 (226)
                      +++||||+|+||++++++|++ |++|++++|+++..         .+     +.+|++++++++++++..     ++|+|
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~~---------~~-----~~~Dl~~~~~~~~~~~~~-----~~d~v   61 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEIQ---------GG-----YKLDLTDFPRLEDFIIKK-----RPDVI   61 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCCT---------TC-----EECCTTSHHHHHHHHHHH-----CCSEE
T ss_pred             EEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcCC---------CC-----ceeccCCHHHHHHHHHhc-----CCCEE
Confidence            489999999999999999994 89999999987531         11     789999999998888764     79999


Q ss_pred             EEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCC----------CCchhhHh
Q 027248           94 VSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQS----------SMAMYGVT  163 (226)
Q Consensus        94 i~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~----------~~~~Y~~s  163 (226)
                      |||||....     +.+.+++++.+++|+.++.++++++.+.   ++++|++||..++.+.+          +...|+.+
T Consensus        62 i~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~iv~~SS~~~~~~~~~~~~e~~~~~~~~~Y~~s  133 (273)
T 2ggs_A           62 INAAAMTDV-----DKCEIEKEKAYKINAEAVRHIVRAGKVI---DSYIVHISTDYVFDGEKGNYKEEDIPNPINYYGLS  133 (273)
T ss_dssp             EECCCCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHT---TCEEEEEEEGGGSCSSSCSBCTTSCCCCSSHHHHH
T ss_pred             EECCcccCh-----hhhhhCHHHHHHHhHHHHHHHHHHHHHh---CCeEEEEecceeEcCCCCCcCCCCCCCCCCHHHHH
Confidence            999997531     2345678999999999999999999763   45999999998764432          35789999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCccccccc---Cchhhhhh-ccCCCCCchhhhccc
Q 027248          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS---NDGVVSSV-SSLKLSPPSSLTLAV  225 (226)
Q Consensus       164 Kaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~---~~~~~~~~-~~~~~~~p~~~a~av  225 (226)
                      |++++.+++.    ... .+|++.|+ |  ++++...+..   ........ ....+..++|+|+++
T Consensus       134 K~~~e~~~~~----~~~~~iR~~~v~-G--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i  193 (273)
T 2ggs_A          134 KLLGETFALQ----DDSLIIRTSGIF-R--NKGFPIYVYKTLKEGKTVFAFKGYYSPISARKLASAI  193 (273)
T ss_dssp             HHHHHHHHCC----TTCEEEEECCCB-S--SSSHHHHHHHHHHTTCCEEEESCEECCCBHHHHHHHH
T ss_pred             HHHHHHHHhC----CCeEEEeccccc-c--ccHHHHHHHHHHHcCCCEEeecCCCCceEHHHHHHHH
Confidence            9999999887    322 56666666 4  3443322210   00000000 034578888888764

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.85  E-value=1.8e-20  Score=154.23  Aligned_cols=162  Identities=20%  Similarity=0.176  Sum_probs=130.6

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhC--CCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLE--GASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      +++++||||+|+||++++++|+++  |++|++++|+....+     +..   .+.++.+|+++.+++++++++.     .
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----~~~---~~~~~~~D~~d~~~~~~~~~~~-----~   68 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-----VVN---SGPFEVVNALDFNQIEHLVEVH-----K   68 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-----HHH---SSCEEECCTTCHHHHHHHHHHT-----T
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-----ccC---CCceEEecCCCHHHHHHHHhhc-----C
Confidence            367999999999999999999999  899999999876532     111   3557889999999988877643     7


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCC------------CCC
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQ------------SSM  157 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~------------~~~  157 (226)
                      +|+|||+||....      ...+++++.+++|+.++.++++++.+.  ..+++|++||...+...            .+.
T Consensus        69 ~d~vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~  140 (312)
T 2yy7_A           69 ITDIYLMAALLSA------TAEKNPAFAWDLNMNSLFHVLNLAKAK--KIKKIFWPSSIAVFGPTTPKENTPQYTIMEPS  140 (312)
T ss_dssp             CCEEEECCCCCHH------HHHHCHHHHHHHHHHHHHHHHHHHHTT--SCSEEECCEEGGGCCTTSCSSSBCSSCBCCCC
T ss_pred             CCEEEECCccCCC------chhhChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEeccHHHhCCCCCCCCccccCcCCCC
Confidence            9999999997431      123567889999999999999998763  23599999998765331            236


Q ss_pred             chhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCc
Q 027248          158 AMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHF  196 (226)
Q Consensus       158 ~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~  196 (226)
                      ..|+.+|++.+.+++.++.++  +++++.+.|+.+..+.
T Consensus       141 ~~Y~~sK~~~e~~~~~~~~~~--~~~~~~lrp~~v~g~~  177 (312)
T 2yy7_A          141 TVYGISKQAGERWCEYYHNIY--GVDVRSIRYPGLISWS  177 (312)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHH--CCEEECEEECEEECSS
T ss_pred             chhHHHHHHHHHHHHHHHHhc--CCcEEEEeCCeEecCC
Confidence            789999999999999998876  7999999999988753

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.84  E-value=6.1e-21  Score=160.27  Aligned_cols=168  Identities=18%  Similarity=0.220  Sum_probs=128.2

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCC-CeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEG-ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      ++++++++||||+|+||++++++|+++| ++|++++|+.....  ...+.    .+. +.+|+++++.++.+++.  ..+
T Consensus        43 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~----~~~-~~~d~~~~~~~~~~~~~--~~~  113 (357)
T 2x6t_A           43 GIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLV----DLN-IADYMDKEDFLIQIMAG--EEF  113 (357)
T ss_dssp             -----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG--GGGTT----TSC-CSEEEEHHHHHHHHHTT--CCC
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch--hhccc----Cce-EeeecCcHHHHHHHHhh--ccc
Confidence            4568999999999999999999999999 89999999875421  01111    122 66899999888777653  124


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCC-----------C
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQS-----------S  156 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~-----------~  156 (226)
                      +++|+|||+||....       +.+++++.+++|+.++.++++++.+.  .. ++|++||...+...+           +
T Consensus       114 ~~~d~Vih~A~~~~~-------~~~~~~~~~~~n~~~~~~ll~a~~~~--~~-r~V~~SS~~v~g~~~~~~~~E~~~~~p  183 (357)
T 2x6t_A          114 GDVEAIFHEGACSST-------TEWDGKYMMDNNYQYSKELLHYCLER--EI-PFLYASSAATYGGRTSDFIESREYEKP  183 (357)
T ss_dssp             SSCCEEEECCSCCCT-------TCCCHHHHHHHTHHHHHHHHHHHHHH--TC-CEEEEEEGGGGCSCSSCCCSSGGGCCC
T ss_pred             CCCCEEEECCcccCC-------ccCCHHHHHHHHHHHHHHHHHHHHHc--CC-eEEEEcchHHhCCCCCCCcCCcCCCCC
Confidence            579999999997541       23456889999999999999999874  33 899999987654332           2


Q ss_pred             CchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCcc
Q 027248          157 MAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFA  197 (226)
Q Consensus       157 ~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~  197 (226)
                      ...|+.+|++.+.+++.++.++  +++++.+.||.+..|..
T Consensus       184 ~~~Y~~sK~~~E~~~~~~~~~~--g~~~~ilRp~~v~Gp~~  222 (357)
T 2x6t_A          184 LNVFGYSKFLFDEYVRQILPEA--NSQIVGFRYFNVYGPRE  222 (357)
T ss_dssp             SSHHHHHHHHHHHHHHHHGGGC--SSCEEEEEECEEESSSC
T ss_pred             CChhHHHHHHHHHHHHHHHHHc--CCCEEEEecCeEECCCC
Confidence            6689999999999999998775  78999999999987753

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.84  E-value=2.2e-20  Score=157.60  Aligned_cols=165  Identities=12%  Similarity=0.076  Sum_probs=132.7

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhC-CCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCC-CHHHHHHHHHHHHHHh
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLE-GASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS-NGQQRKNLINQTIEKF   87 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~-~~~~v~~~~~~~~~~~   87 (226)
                      +++++|+||||+|+||++++++|+++ |++|++++|+.++......     ...+.++.+|++ +.+.++++++      
T Consensus        22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-----~~~v~~~~~Dl~~d~~~~~~~~~------   90 (372)
T 3slg_A           22 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK-----HERMHFFEGDITINKEWVEYHVK------   90 (372)
T ss_dssp             -CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG-----STTEEEEECCTTTCHHHHHHHHH------
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc-----CCCeEEEeCccCCCHHHHHHHhc------
Confidence            45689999999999999999999998 9999999999866543221     246889999999 8998887776      


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCC-------------
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQ-------------  154 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~-------------  154 (226)
                       .+|+|||+||....     ....++..+.+++|+.++.++++++...-   .++|++||...+...             
T Consensus        91 -~~d~Vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~~~---~~~v~~SS~~vyg~~~~~~~~e~~~~~~  161 (372)
T 3slg_A           91 -KCDVILPLVAIATP-----ATYVKQPLRVFELDFEANLPIVRSAVKYG---KHLVFPSTSEVYGMCADEQFDPDASALT  161 (372)
T ss_dssp             -HCSEEEECBCCCCH-----HHHHHCHHHHHHHHTTTTHHHHHHHHHHT---CEEEEECCGGGGBSCCCSSBCTTTCCEE
T ss_pred             -cCCEEEEcCccccH-----HHHhhCHHHHHHHHHHHHHHHHHHHHHhC---CcEEEeCcHHHhCCCCCCCCCccccccc
Confidence             68999999997541     12345567889999999999999987652   699999997654221             


Q ss_pred             -----CCCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCcc
Q 027248          155 -----SSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFA  197 (226)
Q Consensus       155 -----~~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~  197 (226)
                           .+...|+.+|.+.+.+++.++.+   +++++.+.|+.+..|..
T Consensus       162 ~~p~~~p~~~Y~~sK~~~E~~~~~~~~~---g~~~~ilRp~~v~G~~~  206 (372)
T 3slg_A          162 YGPINKPRWIYACSKQLMDRVIWGYGME---GLNFTLFRPFNWIGPGL  206 (372)
T ss_dssp             ECCTTCTTHHHHHHHHHHHHHHHHHHTT---TCEEEEEEECSEECSSC
T ss_pred             cCCCCCCCCcHHHHHHHHHHHHHHHHHC---CCCEEEEccccccCCCc
Confidence                 23447999999999999998877   89999999999987753

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.84  E-value=7.2e-20  Score=166.56  Aligned_cols=177  Identities=18%  Similarity=0.146  Sum_probs=132.6

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHh-cCCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA-RGIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      ..++++|+|+||||+|+||++++++|+++|++|++++|+........+++.. ....+.++.+|+++++++++++++.  
T Consensus         6 ~~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~--   83 (699)
T 1z45_A            6 QSESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY--   83 (699)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS--
T ss_pred             ccccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhC--
Confidence            3456789999999999999999999999999999999986543332222221 1345778899999999988877642  


Q ss_pred             HhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCC------------
Q 027248           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP------------  153 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~------------  153 (226)
                         ++|+|||+||... ..    ...+...+.+++|+.++.++++++...  +.++||++||.+.+..            
T Consensus        84 ---~~D~Vih~A~~~~-~~----~~~~~~~~~~~~Nv~gt~~ll~a~~~~--~~~~iV~~SS~~vyg~~~~~~~~~~~~E  153 (699)
T 1z45_A           84 ---KIDSVIHFAGLKA-VG----ESTQIPLRYYHNNILGTVVLLELMQQY--NVSKFVFSSSATVYGDATRFPNMIPIPE  153 (699)
T ss_dssp             ---CCCEEEECCSCCC-HH----HHHHSHHHHHHHHHHHHHHHHHHHHHH--TCCEEEEEEEGGGGCCGGGSTTCCSBCT
T ss_pred             ---CCCEEEECCcccC-cC----ccccCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEECcHHHhCCCccccccCCccc
Confidence               7999999999753 11    112334678999999999998877653  2469999999865421            


Q ss_pred             ---CCCCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCC
Q 027248          154 ---QSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTH  195 (226)
Q Consensus       154 ---~~~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~  195 (226)
                         ..+...|+.||++++.+++.++.+...++++..+.|+.+-.+
T Consensus       154 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~  198 (699)
T 1z45_A          154 ECPLGPTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGA  198 (699)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECC
T ss_pred             cCCCCCCChHHHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCC
Confidence               123568999999999999999988644899999999877654

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.84  E-value=7.9e-20  Score=152.36  Aligned_cols=163  Identities=14%  Similarity=0.050  Sum_probs=128.1

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhC-CCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCH-HHHHHHHHHHHHHhCCC
Q 027248           13 KVAIVTASTQGIGFGIAERLGLE-GASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNG-QQRKNLINQTIEKFGKI   90 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~~~i   90 (226)
                      ++++||||+|+||++++++|+++ |++|++++|+.++.+...     ....+.++.+|+++. +.++++++       .+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~-------~~   68 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-----NHPHFHFVEGDISIHSEWIEYHVK-------KC   68 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-----TCTTEEEEECCTTTCSHHHHHHHH-------HC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhh-----cCCCeEEEeccccCcHHHHHhhcc-------CC
Confidence            36999999999999999999998 899999999887643321     124678899999984 55665554       68


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCC---------------
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQS---------------  155 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~---------------  155 (226)
                      |+|||+||.... .    ...+++++.+++|+.++.++++++...   ++++|++||...+...+               
T Consensus        69 d~vih~A~~~~~-~----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~  140 (345)
T 2bll_A           69 DVVLPLVAIATP-I----EYTRNPLRVFELDFEENLRIIRYCVKY---RKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGP  140 (345)
T ss_dssp             SEEEECBCCCCH-H----HHHHSHHHHHHHHTHHHHHHHHHHHHT---TCEEEEECCGGGGBTCCCSSBCTTTCCCBCCC
T ss_pred             CEEEEcccccCc-c----chhcCHHHHHHHHHHHHHHHHHHHHHh---CCeEEEEecHHHcCCCCCCCcCCcccccccCc
Confidence            999999997531 1    123467789999999999999998764   26999999976542211               


Q ss_pred             ---CCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCcc
Q 027248          156 ---SMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFA  197 (226)
Q Consensus       156 ---~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~  197 (226)
                         +...|+.+|++.+.+++.++.+.  +++++.+.||.+..|..
T Consensus       141 ~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~ilrp~~v~G~~~  183 (345)
T 2bll_A          141 VNKPRWIYSVSKQLLDRVIWAYGEKE--GLQFTLFRPFNWMGPRL  183 (345)
T ss_dssp             TTCGGGHHHHHHHHHHHHHHHHHHHH--CCCEEEEEECSEECSSC
T ss_pred             ccCcccccHHHHHHHHHHHHHHHHhc--CCCEEEEcCCcccCCCc
Confidence               22379999999999999998876  78999999999987754

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.84  E-value=3.2e-20  Score=145.41  Aligned_cols=178  Identities=13%  Similarity=0.098  Sum_probs=118.6

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCEE
Q 027248           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVV   93 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~l   93 (226)
                      +++||||+|+||++++++|+++|++|++++|++++++...       ..+.++.+|++++++         +.++.+|+|
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-------~~~~~~~~D~~d~~~---------~~~~~~d~v   65 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-------KDINILQKDIFDLTL---------SDLSDQNVV   65 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-------SSSEEEECCGGGCCH---------HHHTTCSEE
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-------CCCeEEeccccChhh---------hhhcCCCEE
Confidence            4899999999999999999999999999999987654332       457889999999887         234589999


Q ss_pred             EEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCC------------CCchhh
Q 027248           94 VSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQS------------SMAMYG  161 (226)
Q Consensus        94 i~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~------------~~~~Y~  161 (226)
                      ||+||....              ...+|+.++..+++++...  ..+++|++||..+..+.+            +...|+
T Consensus        66 i~~ag~~~~--------------~~~~~~~~~~~l~~a~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~  129 (221)
T 3ew7_A           66 VDAYGISPD--------------EAEKHVTSLDHLISVLNGT--VSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYP  129 (221)
T ss_dssp             EECCCSSTT--------------TTTSHHHHHHHHHHHHCSC--CSSEEEEECCCC-------------------CCCSC
T ss_pred             EECCcCCcc--------------ccchHHHHHHHHHHHHHhc--CCceEEEEecceEEEcCCCCccccccCCCCCHHHHH
Confidence            999998431              1345777776666666442  246999999998754332            346699


Q ss_pred             HhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCccc--ccccC-chhhhhhccCCCCCchhhhccc
Q 027248          162 VTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAE--YITSN-DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       162 ~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~~--~~~~~-~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      .+|++.+.+. .+..+ ..+++++.+.||++.++...  .+... ..+...-.....+.++|+|+++
T Consensus       130 ~~k~~~e~~~-~~~~~-~~gi~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  194 (221)
T 3ew7_A          130 TARAQAKQLE-HLKSH-QAEFSWTYISPSAMFEPGERTGDYQIGKDHLLFGSDGNSFISMEDYAIAV  194 (221)
T ss_dssp             CHHHHHHHHH-HHHTT-TTTSCEEEEECSSCCCCC---------------------CCCHHHHHHHH
T ss_pred             HHHHHHHHHH-HHHhh-ccCccEEEEeCcceecCCCccCceEeccccceecCCCCceEeHHHHHHHH
Confidence            9999998873 33321 23899999999999886211  11100 0000000112367788888764

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.83  E-value=5.8e-20  Score=153.48  Aligned_cols=167  Identities=15%  Similarity=0.061  Sum_probs=125.9

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      ..+++++++||||+|+||++++++|+++|++|++++|+..........+. ...++.++.+|+.++.            +
T Consensus        23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~------------~   89 (343)
T 2b69_A           23 MEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWI-GHENFELINHDVVEPL------------Y   89 (343)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGT-TCTTEEEEECCTTSCC------------C
T ss_pred             cccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhc-cCCceEEEeCccCChh------------h
Confidence            34568999999999999999999999999999999997543221111111 1346788899998763            3


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcC---------------
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ---------------  152 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~---------------  152 (226)
                      ..+|+|||+||.... ..    ..+++++.+++|+.++.++++++...   +.++|++||...+.               
T Consensus        90 ~~~d~vih~A~~~~~-~~----~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~v~~SS~~v~g~~~~~~~~E~~~~~~  161 (343)
T 2b69_A           90 IEVDQIYHLASPASP-PN----YMYNPIKTLKTNTIGTLNMLGLAKRV---GARLLLASTSEVYGDPEVHPQSEDYWGHV  161 (343)
T ss_dssp             CCCSEEEECCSCCSH-HH----HTTCHHHHHHHHHHHHHHHHHHHHHH---TCEEEEEEEGGGGBSCSSSSBCTTCCCBC
T ss_pred             cCCCEEEECccccCc-hh----hhhCHHHHHHHHHHHHHHHHHHHHHh---CCcEEEECcHHHhCCCCCCCCcccccccC
Confidence            589999999997531 11    12345788999999999999998764   34899999986542               


Q ss_pred             -CCCCCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCcc
Q 027248          153 -PQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFA  197 (226)
Q Consensus       153 -~~~~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~  197 (226)
                       +..+...|+.||++.+.+++.++.+.  +++++.+.||.+..|..
T Consensus       162 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilrp~~v~G~~~  205 (343)
T 2b69_A          162 NPIGPRACYDEGKRVAETMCYAYMKQE--GVEVRVARIFNTFGPRM  205 (343)
T ss_dssp             CSSSTTHHHHHHHHHHHHHHHHHHHHH--CCCEEEEEECCEECTTC
T ss_pred             CCCCCCCchHHHHHHHHHHHHHHHHHh--CCcEEEEEEcceeCcCC
Confidence             22345679999999999999998776  78999999999988753

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.83  E-value=1.1e-19  Score=150.05  Aligned_cols=154  Identities=21%  Similarity=0.246  Sum_probs=123.7

Q ss_pred             EEEEEcCCCchhHHHHHHHHhC--CCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCC
Q 027248           14 VAIVTASTQGIGFGIAERLGLE--GASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id   91 (226)
                      +++||||+|+||++++++|+++  |++|++++|+....+           .+.++.+|+++++++++++++     ..+|
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----------~~~~~~~D~~d~~~~~~~~~~-----~~~d   64 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG-----------GIKFITLDVSNRDEIDRAVEK-----YSID   64 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT-----------TCCEEECCTTCHHHHHHHHHH-----TTCC
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc-----------CceEEEecCCCHHHHHHHHhh-----cCCc
Confidence            3899999999999999999998  899999999865432           345788999999998887764     2799


Q ss_pred             EEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCC------------CCCch
Q 027248           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQ------------SSMAM  159 (226)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~------------~~~~~  159 (226)
                      +|||+||...   .   ...+++++.+++|+.++.++++++...  ..+++|++||...+.+.            .+...
T Consensus        65 ~vih~a~~~~---~---~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~~~  136 (317)
T 3ajr_A           65 AIFHLAGILS---A---KGEKDPALAYKVNMNGTYNILEAAKQH--RVEKVVIPSTIGVFGPETPKNKVPSITITRPRTM  136 (317)
T ss_dssp             EEEECCCCCH---H---HHHHCHHHHHHHHHHHHHHHHHHHHHT--TCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCCSH
T ss_pred             EEEECCcccC---C---ccccChHHHhhhhhHHHHHHHHHHHHc--CCCEEEEecCHHHhCCCCCCCCccccccCCCCch
Confidence            9999999743   1   124567889999999999999998764  23599999998765432            14678


Q ss_pred             hhHhHHHHHHHHHHHHHHhCCCeEEEEEecCcee
Q 027248          160 YGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVP  193 (226)
Q Consensus       160 Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~  193 (226)
                      |+.||++.+.+++.++.+.  +++++.+.|+.+-
T Consensus       137 Y~~sK~~~e~~~~~~~~~~--~~~~~~lR~~~~~  168 (317)
T 3ajr_A          137 FGVTKIAAELLGQYYYEKF--GLDVRSLRYPGII  168 (317)
T ss_dssp             HHHHHHHHHHHHHHHHHHH--CCEEEEEEECEEE
T ss_pred             HHHHHHHHHHHHHHHHHhc--CCeEEEEecCcEe
Confidence            9999999999999988765  7899999755443

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.83  E-value=1.5e-19  Score=157.73  Aligned_cols=166  Identities=17%  Similarity=0.122  Sum_probs=128.3

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhC---CCeEEEEecCcchHHHHHHHHHh----------------cCCcEEEEEee
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLE---GASVVVSSRKQKNVDEAVVKLKA----------------RGIEVIGVVCH   69 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~---g~~v~~~~r~~~~~~~~~~~~~~----------------~~~~~~~~~~D   69 (226)
                      ..++|+|+||||+|+||++++++|+++   |++|++++|+++...... .+.+                ...++.++.+|
T Consensus        70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~D  148 (478)
T 4dqv_A           70 SPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARR-RLEKTFDSGDPELLRHFKELAADRLEVVAGD  148 (478)
T ss_dssp             CSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHH-HHHGGGCSSCHHHHHHHHHHHTTTEEEEECC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHH-HHHHHHHhcchhhhhhhhhhccCceEEEEeE
Confidence            457899999999999999999999999   899999999987543222 1111                13578999999


Q ss_pred             CC------CHHHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEE
Q 027248           70 VS------NGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVV  143 (226)
Q Consensus        70 v~------~~~~v~~~~~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv  143 (226)
                      ++      +.+.++.+++       .+|+|||+||....         +.+++.+++|+.++.++++++...  +.+++|
T Consensus       149 l~~~~~gld~~~~~~~~~-------~~D~Vih~Aa~~~~---------~~~~~~~~~Nv~gt~~ll~aa~~~--~~~~~V  210 (478)
T 4dqv_A          149 KSEPDLGLDQPMWRRLAE-------TVDLIVDSAAMVNA---------FPYHELFGPNVAGTAELIRIALTT--KLKPFT  210 (478)
T ss_dssp             TTSGGGGCCHHHHHHHHH-------HCCEEEECCSSCSB---------SSCCEEHHHHHHHHHHHHHHHTSS--SCCCEE
T ss_pred             CCCcccCCCHHHHHHHHc-------CCCEEEECccccCC---------cCHHHHHHHHHHHHHHHHHHHHhC--CCCeEE
Confidence            99      5555555554       78999999998641         233567899999999999998764  234899


Q ss_pred             EEeccCCcCCCCC----------------------CchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCC
Q 027248          144 LISSIAGYQPQSS----------------------MAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTH  195 (226)
Q Consensus       144 ~~sS~~~~~~~~~----------------------~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~  195 (226)
                      ++||.+.+.....                      ...|+.||.+.+.+++.++.+.  +++++.+.||.|-.+
T Consensus       211 ~iSS~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--gi~~~ivRpg~v~G~  282 (478)
T 4dqv_A          211 YVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC--ALPVAVFRCGMILAD  282 (478)
T ss_dssp             EEEEGGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH--CCCEEEEEECEEECC
T ss_pred             EEeehhhcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHh--CCCeEEEECceeeCC
Confidence            9999765432111                      1349999999999999998865  789999999999765

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.82  E-value=3e-19  Score=147.61  Aligned_cols=153  Identities=13%  Similarity=0.164  Sum_probs=124.2

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id   91 (226)
                      +++++||||+|+||++++++|+++|++|++++|+.                    .+|+++.++++++++..     .+|
T Consensus         3 ~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~--------------------~~D~~d~~~~~~~~~~~-----~~d   57 (321)
T 1e6u_A            3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD--------------------ELNLLDSRAVHDFFASE-----RID   57 (321)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT--------------------TCCTTCHHHHHHHHHHH-----CCS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc--------------------cCCccCHHHHHHHHHhc-----CCC
Confidence            47899999999999999999999999999988863                    25999999888877654     799


Q ss_pred             EEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCC----------------CC
Q 027248           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP----------------QS  155 (226)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~----------------~~  155 (226)
                      +|||+||....    .....++.++.+++|+.++.++++++...  ..+++|++||...+..                .|
T Consensus        58 ~vih~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p  131 (321)
T 1e6u_A           58 QVYLAAAKVGG----IVANNTYPADFIYQNMMIESNIIHAAHQN--DVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEP  131 (321)
T ss_dssp             EEEECCCCCCC----HHHHHHCHHHHHHHHHHHHHHHHHHHHHT--TCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCG
T ss_pred             EEEEcCeecCC----cchhhhCHHHHHHHHHHHHHHHHHHHHHh--CCCeEEEEccHHHcCCCCCCCcCccccccCCCCC
Confidence            99999997531    11234556788999999999999998764  2359999999876521                11


Q ss_pred             CCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCcc
Q 027248          156 SMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFA  197 (226)
Q Consensus       156 ~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~  197 (226)
                      ....|+.+|.+.+.+++.++.+.  +++++.+.||++..|..
T Consensus       132 ~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilrp~~v~G~~~  171 (321)
T 1e6u_A          132 TNEPYAIAKIAGIKLCESYNRQY--GRDYRSVMPTNLYGPHD  171 (321)
T ss_dssp             GGHHHHHHHHHHHHHHHHHHHHH--CCEEEEEEECEEESTTC
T ss_pred             CCCccHHHHHHHHHHHHHHHHHh--CCCEEEEEeCCcCCcCC
Confidence            13589999999999999998776  79999999999987754

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.82  E-value=2.7e-19  Score=147.48  Aligned_cols=156  Identities=19%  Similarity=0.129  Sum_probs=124.7

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCE
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~   92 (226)
                      ++++||||+|.||++++++|+++|++|++++|++...+  .+       .+.++.+|++ .++++++++       ++|+
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~-------~~~~~~~Dl~-~~~~~~~~~-------~~d~   65 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA--IN-------DYEYRVSDYT-LEDLINQLN-------DVDA   65 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC--------------CCEEEECCCC-HHHHHHHTT-------TCSE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc--CC-------ceEEEEcccc-HHHHHHhhc-------CCCE
Confidence            67999999999999999999999999999999954432  11       5778999999 888776655       8999


Q ss_pred             EEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCC-----------CCCCchhh
Q 027248           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP-----------QSSMAMYG  161 (226)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~-----------~~~~~~Y~  161 (226)
                      |||+||.....         +..+.+++|+.++.++++++...  .-+++|++||...+..           ..+...|+
T Consensus        66 Vih~a~~~~~~---------~~~~~~~~n~~~~~~ll~a~~~~--~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~  134 (311)
T 3m2p_A           66 VVHLAATRGSQ---------GKISEFHDNEILTQNLYDACYEN--NISNIVYASTISAYSDETSLPWNEKELPLPDLMYG  134 (311)
T ss_dssp             EEECCCCCCSS---------SCGGGTHHHHHHHHHHHHHHHHT--TCCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSHHH
T ss_pred             EEEccccCCCC---------ChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEccHHHhCCCCCCCCCCCCCCCCCchhH
Confidence            99999986521         34567889999999999998764  2348999999765422           22457899


Q ss_pred             HhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCccc
Q 027248          162 VTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAE  198 (226)
Q Consensus       162 ~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~~  198 (226)
                      .+|.+.+.+++.++.+.  +++++.+.|+.+..+...
T Consensus       135 ~sK~~~E~~~~~~~~~~--g~~~~ilRp~~v~G~~~~  169 (311)
T 3m2p_A          135 VSKLACEHIGNIYSRKK--GLCIKNLRFAHLYGFNEK  169 (311)
T ss_dssp             HHHHHHHHHHHHHHHHS--CCEEEEEEECEEECSCC-
T ss_pred             HHHHHHHHHHHHHHHHc--CCCEEEEeeCceeCcCCC
Confidence            99999999999988864  899999999999877543

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.81  E-value=3.7e-19  Score=145.26  Aligned_cols=144  Identities=21%  Similarity=0.225  Sum_probs=117.3

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id   91 (226)
                      -++++||||+|+||++++++|+++|++|++++|+                     .+|++++++++++++..     ++|
T Consensus        12 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~---------------------~~Dl~d~~~~~~~~~~~-----~~d   65 (292)
T 1vl0_A           12 HMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ---------------------DLDITNVLAVNKFFNEK-----KPN   65 (292)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT---------------------TCCTTCHHHHHHHHHHH-----CCS
T ss_pred             cceEEEECCCChHHHHHHHHHHhCCCeEEeccCc---------------------cCCCCCHHHHHHHHHhc-----CCC
Confidence            5789999999999999999999999999999996                     26999999988887754     799


Q ss_pred             EEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCC-----------CCchh
Q 027248           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQS-----------SMAMY  160 (226)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~-----------~~~~Y  160 (226)
                      +|||+||....     +.+.+++++.+++|+.++.++++++.+.   +.++|++||.+.+.+.+           +...|
T Consensus        66 ~vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~a~~~~---~~~iv~~SS~~v~~~~~~~~~~E~~~~~~~~~Y  137 (292)
T 1vl0_A           66 VVINCAAHTAV-----DKCEEQYDLAYKINAIGPKNLAAAAYSV---GAEIVQISTDYVFDGEAKEPITEFDEVNPQSAY  137 (292)
T ss_dssp             EEEECCCCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHH---TCEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHH
T ss_pred             EEEECCccCCH-----HHHhcCHHHHHHHHHHHHHHHHHHHHHc---CCeEEEechHHeECCCCCCCCCCCCCCCCccHH
Confidence            99999997431     2345678899999999999999999874   24999999987653322           46789


Q ss_pred             hHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCC
Q 027248          161 GVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTH  195 (226)
Q Consensus       161 ~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~  195 (226)
                      +.+|++.+.+++.++.+      +..+.|+.+..+
T Consensus       138 ~~sK~~~E~~~~~~~~~------~~~lR~~~v~G~  166 (292)
T 1vl0_A          138 GKTKLEGENFVKALNPK------YYIVRTAWLYGD  166 (292)
T ss_dssp             HHHHHHHHHHHHHHCSS------EEEEEECSEESS
T ss_pred             HHHHHHHHHHHHhhCCC------eEEEeeeeeeCC
Confidence            99999999999887542      556677766644

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.81  E-value=5.7e-19  Score=159.71  Aligned_cols=166  Identities=13%  Similarity=0.048  Sum_probs=130.9

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhC-CCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHH-HHHHHHHHHHHh
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLE-GASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQ-RKNLINQTIEKF   87 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-v~~~~~~~~~~~   87 (226)
                      +++++++||||+|+||++++++|+++ |++|++++|+.++.+...     ...++.++.+|+++.++ ++.+++      
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~-----~~~~v~~v~~Dl~d~~~~~~~~~~------  381 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-----NHPHFHFVEGDISIHSEWIEYHVK------  381 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGT-----TCTTEEEEECCTTTCHHHHHHHHH------
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhc-----cCCceEEEECCCCCcHHHHHHhhc------
Confidence            46789999999999999999999998 899999999876543211     13468889999999765 554443      


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCC-------------
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQ-------------  154 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~-------------  154 (226)
                       ++|+|||+||.... .    ...+++++.+++|+.++.++++++...   ++++|++||...+...             
T Consensus       382 -~~D~Vih~Aa~~~~-~----~~~~~~~~~~~~Nv~gt~~ll~aa~~~---~~r~V~~SS~~vyg~~~~~~~~E~~~~~~  452 (660)
T 1z7e_A          382 -KCDVVLPLVAIATP-I----EYTRNPLRVFELDFEENLRIIRYCVKY---RKRIIFPSTSEVYGMCSDKYFDEDHSNLI  452 (660)
T ss_dssp             -HCSEEEECCCCCCT-H----HHHHSHHHHHHHHTHHHHHHHHHHHHT---TCEEEEECCGGGGBTCCSSSBCTTTCCEE
T ss_pred             -CCCEEEECceecCc-c----ccccCHHHHHHhhhHHHHHHHHHHHHh---CCEEEEEecHHHcCCCCCcccCCCccccc
Confidence             68999999997541 1    123466889999999999999998774   2699999998664221             


Q ss_pred             -----CCCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCcc
Q 027248          155 -----SSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFA  197 (226)
Q Consensus       155 -----~~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~  197 (226)
                           .+...|+.||.+.+.+++.++.+.  +++++.+.||.+..+..
T Consensus       453 ~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~--gi~~~ilRpg~v~Gp~~  498 (660)
T 1z7e_A          453 VGPVNKPRWIYSVSKQLLDRVIWAYGEKE--GLQFTLFRPFNWMGPRL  498 (660)
T ss_dssp             ECCTTCTTHHHHHHHHHHHHHHHHHHHHH--CCCEEEEEECSEESTTS
T ss_pred             cCcccCCCCCcHHHHHHHHHHHHHHHHHc--CCCEEEECCCcccCCCc
Confidence                 123379999999999999998876  79999999999988754

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.80  E-value=5.4e-19  Score=145.19  Aligned_cols=163  Identities=18%  Similarity=0.195  Sum_probs=125.0

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCC-CeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCE
Q 027248           14 VAIVTASTQGIGFGIAERLGLEG-ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~   92 (226)
                      +++||||+|+||++++++|+++| ++|++++|+.....  ...+.  ...   +.+|+++.+.++.+++...  ++++|+
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~--~~~---~~~d~~~~~~~~~~~~~~~--~~~~d~   71 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLV--DLN---IADYMDKEDFLIQIMAGEE--FGDVEA   71 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG--GHHHH--TSC---CSEEEEHHHHHHHHHTTCC--CSSCCE
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch--hhhcC--cce---eccccccHHHHHHHHhccc--cCCCcE
Confidence            38999999999999999999999 89999999876431  11121  111   5689998888776654110  136999


Q ss_pred             EEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCC-----------CCCchhh
Q 027248           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQ-----------SSMAMYG  161 (226)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~-----------~~~~~Y~  161 (226)
                      |||+||....       +.+++++.+++|+.++.++++++...  .. ++|++||...+...           .+...|+
T Consensus        72 vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~a~~~~--~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~  141 (310)
T 1eq2_A           72 IFHEGACSST-------TEWDGKYMMDNNYQYSKELLHYCLER--EI-PFLYASSAATYGGRTSDFIESREYEKPLNVYG  141 (310)
T ss_dssp             EEECCSCCCT-------TCCCHHHHHHHTHHHHHHHHHHHHHH--TC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHH
T ss_pred             EEECcccccC-------cccCHHHHHHHHHHHHHHHHHHHHHc--CC-eEEEEeeHHHhCCCCCCCCCCCCCCCCCChhH
Confidence            9999997541       22356788999999999999999764  23 89999998654322           2256899


Q ss_pred             HhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCcc
Q 027248          162 VTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFA  197 (226)
Q Consensus       162 ~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~  197 (226)
                      .+|.+.+.+++.++.+.  +++++.+.||++..|..
T Consensus       142 ~sK~~~e~~~~~~~~~~--g~~~~~lrp~~v~G~~~  175 (310)
T 1eq2_A          142 YSKFLFDEYVRQILPEA--NSQIVGFRYFNVYGPRE  175 (310)
T ss_dssp             HHHHHHHHHHHHHGGGC--SSCEEEEEECEEESSSC
T ss_pred             HHHHHHHHHHHHHHHHc--CCCEEEEeCCcEECcCC
Confidence            99999999999988764  79999999999988754

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.78  E-value=1.5e-18  Score=141.24  Aligned_cols=145  Identities=8%  Similarity=0.012  Sum_probs=115.4

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhC--CCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           13 KVAIVTASTQGIGFGIAERLGLE--GASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      |+++||||+|+||++++++|+++  |++|++++|++++.+...    .  ..+.++.+|++++++++++++       .+
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~----~--~~~~~~~~D~~d~~~l~~~~~-------~~   67 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLA----D--QGVEVRHGDYNQPESLQKAFA-------GV   67 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHH----H--TTCEEEECCTTCHHHHHHHTT-------TC
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHh----h--cCCeEEEeccCCHHHHHHHHh-------cC
Confidence            46999999999999999999999  999999999987654432    1  246788999999998877655       68


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHhHHHHHHH
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGL  170 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~  170 (226)
                      |++||+||...        . +      ++|+.++.++++++...  .-+++|++||..+..   ....|+.+|.+.+.+
T Consensus        68 d~vi~~a~~~~--------~-~------~~n~~~~~~l~~a~~~~--~~~~~v~~Ss~~~~~---~~~~y~~~K~~~E~~  127 (287)
T 2jl1_A           68 SKLLFISGPHY--------D-N------TLLIVQHANVVKAARDA--GVKHIAYTGYAFAEE---SIIPLAHVHLATEYA  127 (287)
T ss_dssp             SEEEECCCCCS--------C-H------HHHHHHHHHHHHHHHHT--TCSEEEEEEETTGGG---CCSTHHHHHHHHHHH
T ss_pred             CEEEEcCCCCc--------C-c------hHHHHHHHHHHHHHHHc--CCCEEEEECCCCCCC---CCCchHHHHHHHHHH
Confidence            99999998521        1 1      57899999999888653  235999999987642   234799999999998


Q ss_pred             HHHHHHHhCCCeEEEEEecCceeCCc
Q 027248          171 TKALAAEMAPDTRVNCVAPGFVPTHF  196 (226)
Q Consensus       171 ~~~la~e~~~~i~v~~v~Pg~v~t~~  196 (226)
                      .+.      .+++++.+.||++.++.
T Consensus       128 ~~~------~~~~~~ilrp~~~~~~~  147 (287)
T 2jl1_A          128 IRT------TNIPYTFLRNALYTDFF  147 (287)
T ss_dssp             HHH------TTCCEEEEEECCBHHHH
T ss_pred             HHH------cCCCeEEEECCEecccc
Confidence            753      37899999999887764

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.78  E-value=5.5e-18  Score=139.13  Aligned_cols=159  Identities=18%  Similarity=0.102  Sum_probs=119.9

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      ++++++++||||+|+||++++++|+++|+      +....           ...+..+.+|++++++++++++..     
T Consensus         3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~~-----------~~~~~~~~~D~~d~~~~~~~~~~~-----   60 (319)
T 4b8w_A            3 YFQSMRILVTGGSGLVGKAIQKVVADGAG------LPGED-----------WVFVSSKDADLTDTAQTRALFEKV-----   60 (319)
T ss_dssp             CCCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTCE-----------EEECCTTTCCTTSHHHHHHHHHHS-----
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhcCC------ccccc-----------ccccCceecccCCHHHHHHHHhhc-----
Confidence            35678999999999999999999999997      11100           011223467999999988887742     


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCC---------------
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP---------------  153 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~---------------  153 (226)
                      ++|+|||+||....    ...+.++..+.+++|+.++.++++++...-  -+++|++||...+..               
T Consensus        61 ~~d~Vih~A~~~~~----~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~--~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~  134 (319)
T 4b8w_A           61 QPTHVIHLAAMVGG----LFRNIKYNLDFWRKNVHMNDNVLHSAFEVG--ARKVVSCLSTCIFPDKTTYPIDETMIHNGP  134 (319)
T ss_dssp             CCSEEEECCCCCCC----HHHHTTCHHHHHHHHHHHHHHHHHHHHHTT--CSEEEEECCGGGSCSSCCSSBCGGGGGBSC
T ss_pred             CCCEEEECceeccc----ccccccCHHHHHHHHHHHHHHHHHHHHHcC--CCeEEEEcchhhcCCCCCCCccccccccCC
Confidence            69999999997431    112234557789999999999999986642  348999999865421               


Q ss_pred             -CCCCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCcc
Q 027248          154 -QSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFA  197 (226)
Q Consensus       154 -~~~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~  197 (226)
                       .|....|+.||.+.+.+++.++.+.  +++++.+.|+.+..|..
T Consensus       135 ~~p~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilRp~~v~Gp~~  177 (319)
T 4b8w_A          135 PHNSNFGYSYAKRMIDVQNRAYFQQY--GCTFTAVIPTNVFGPHD  177 (319)
T ss_dssp             CCSSSHHHHHHHHHHHHHHHHHHHHH--CCEEEEEEECEEECTTC
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHhh--CCCEEEEeeccccCCCC
Confidence             1222369999999999999998876  78999999999987754

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.78  E-value=1.4e-18  Score=141.40  Aligned_cols=143  Identities=19%  Similarity=0.237  Sum_probs=117.4

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCEE
Q 027248           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVV   93 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~l   93 (226)
                      +++||||+|+||++++++|+++|++|++++|.                     .+|+++.+++++++++.     ++|+|
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~---------------------~~D~~d~~~~~~~~~~~-----~~d~v   60 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKK---------------------LLDITNISQVQQVVQEI-----RPHII   60 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTT---------------------TSCTTCHHHHHHHHHHH-----CCSEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeccc---------------------ccCCCCHHHHHHHHHhc-----CCCEE
Confidence            69999999999999999999999999999992                     26999999988888765     79999


Q ss_pred             EEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCC-----------CCCCchhhH
Q 027248           94 VSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP-----------QSSMAMYGV  162 (226)
Q Consensus        94 i~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~-----------~~~~~~Y~~  162 (226)
                      ||+||....     ..+.+++++.+++|+.++.++++++...   +.++|++||...+.+           ..+...|+.
T Consensus        61 i~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~  132 (287)
T 3sc6_A           61 IHCAAYTKV-----DQAEKERDLAYVINAIGARNVAVASQLV---GAKLVYISTDYVFQGDRPEGYDEFHNPAPINIYGA  132 (287)
T ss_dssp             EECCCCCCH-----HHHTTCHHHHHHHHTHHHHHHHHHHHHH---TCEEEEEEEGGGSCCCCSSCBCTTSCCCCCSHHHH
T ss_pred             EECCcccCh-----HHHhcCHHHHHHHHHHHHHHHHHHHHHc---CCeEEEEchhhhcCCCCCCCCCCCCCCCCCCHHHH
Confidence            999997541     1223567889999999999999998764   348999999876532           234678999


Q ss_pred             hHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCc
Q 027248          163 TKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHF  196 (226)
Q Consensus       163 sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~  196 (226)
                      +|.+.+.+++.++.      ++..+.|+.+..|.
T Consensus       133 sK~~~E~~~~~~~~------~~~ilR~~~v~G~~  160 (287)
T 3sc6_A          133 SKYAGEQFVKELHN------KYFIVRTSWLYGKY  160 (287)
T ss_dssp             HHHHHHHHHHHHCS------SEEEEEECSEECSS
T ss_pred             HHHHHHHHHHHhCC------CcEEEeeeeecCCC
Confidence            99999999988655      35788899887764

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.78  E-value=2.2e-18  Score=151.35  Aligned_cols=166  Identities=13%  Similarity=0.047  Sum_probs=127.2

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchH---HHHHHHHH---------hcCCcEEEEEeeCCCHHHHHHH
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNV---DEAVVKLK---------ARGIEVIGVVCHVSNGQQRKNL   79 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~---~~~~~~~~---------~~~~~~~~~~~Dv~~~~~v~~~   79 (226)
                      .++|+||||+|+||++++++|.+.|++|++++|+....   ....+.+.         ....++.++.+|+++++.+.  
T Consensus       150 ~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~--  227 (508)
T 4f6l_B          150 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV--  227 (508)
T ss_dssp             CEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC--
T ss_pred             CCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC--
Confidence            47999999999999999999999999999999998732   22222221         12457899999999987766  


Q ss_pred             HHHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCC--cC-----
Q 027248           80 INQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG--YQ-----  152 (226)
Q Consensus        80 ~~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~--~~-----  152 (226)
                            ....+|+|||+||...        ...+++..+++|+.++.++++++..   +..++|++||...  ..     
T Consensus       228 ------~~~~~D~Vih~Aa~~~--------~~~~~~~~~~~Nv~gt~~ll~~a~~---~~~~~v~iSS~~vG~~~~~~~~  290 (508)
T 4f6l_B          228 ------LPENMDTIIHAGARTD--------HFGDDDEFEKVNVQGTVDVIRLAQQ---HHARLIYVSTISVGTYFDIDTE  290 (508)
T ss_dssp             ------CSSCCSEEEECCCC----------------CCHHHHHHHHHHHHHHHHT---TTCEEEEEEESCTTSEECTTCS
T ss_pred             ------CccCCCEEEECCceec--------CCCCHHHHhhhHHHHHHHHHHHHHh---CCCcEEEeCChhhccCCccCCc
Confidence                  3468999999999753        1235678889999999999999987   3568999999887  10     


Q ss_pred             -----------CCCCCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCcccc
Q 027248          153 -----------PQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEY  199 (226)
Q Consensus       153 -----------~~~~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~~~  199 (226)
                                 +..+...|+.||.+.+.+++.++.   .|++++.+.||.+..+....
T Consensus       291 ~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~gi~~~ilRp~~v~G~~~~~  345 (508)
T 4f6l_B          291 DVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN---NGLDGRIVRVGNLTSPYNGR  345 (508)
T ss_dssp             CCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHH---TTCEEEEEEECCEESCSSSC
T ss_pred             CcccccccccccccCCCcHHHHHHHHHHHHHHHHH---cCCCEEEEecceeccCCCCC
Confidence                       012567899999999999988654   38999999999998775443

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.77  E-value=3e-18  Score=140.25  Aligned_cols=147  Identities=18%  Similarity=0.153  Sum_probs=118.6

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCEE
Q 027248           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVV   93 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~l   93 (226)
                      +++||||+|+||++++++|+ +|++|++++|+..                 .+.+|++++++++++++..     ++|+|
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-----------------~~~~D~~d~~~~~~~~~~~-----~~d~v   58 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-----------------EFCGDFSNPKGVAETVRKL-----RPDVI   58 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-----------------SSCCCTTCHHHHHHHHHHH-----CCSEE
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-----------------cccccCCCHHHHHHHHHhc-----CCCEE
Confidence            59999999999999999999 8999999999862                 2468999999988877753     79999


Q ss_pred             EEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCC-----------CCCchhhH
Q 027248           94 VSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQ-----------SSMAMYGV  162 (226)
Q Consensus        94 i~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~-----------~~~~~Y~~  162 (226)
                      ||+||....     ..+.+++++.+++|+.++.++++++...   +.++|++||...+.+.           .+...|+.
T Consensus        59 ih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~  130 (299)
T 1n2s_A           59 VNAAAHTAV-----DKAESEPELAQLLNATSVEAIAKAANET---GAWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGK  130 (299)
T ss_dssp             EECCCCCCH-----HHHTTCHHHHHHHHTHHHHHHHHHHTTT---TCEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHH
T ss_pred             EECcccCCH-----hhhhcCHHHHHHHHHHHHHHHHHHHHHc---CCcEEEEecccEEeCCCCCCCCCCCCCCCccHHHH
Confidence            999997531     1223456788999999999999998763   3489999998765332           23568999


Q ss_pred             hHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCcc
Q 027248          163 TKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFA  197 (226)
Q Consensus       163 sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~  197 (226)
                      +|++.+.+++.++.      +++.+.|+++..+..
T Consensus       131 sK~~~E~~~~~~~~------~~~ilRp~~v~G~~~  159 (299)
T 1n2s_A          131 TKLAGEKALQDNCP------KHLIFRTSWVYAGKG  159 (299)
T ss_dssp             HHHHHHHHHHHHCS------SEEEEEECSEECSSS
T ss_pred             HHHHHHHHHHHhCC------CeEEEeeeeecCCCc
Confidence            99999999887653      688999999988753

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.75  E-value=4.1e-19  Score=146.50  Aligned_cols=162  Identities=18%  Similarity=-0.011  Sum_probs=114.1

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHh--cCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA--RGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      ++.+++|+||||+|+||++++++|+++|++|++++|+..........+..  ....+.++.+|++               
T Consensus         4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~---------------   68 (321)
T 3vps_A            4 NTLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS---------------   68 (321)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT---------------
T ss_pred             ccCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc---------------
Confidence            35578999999999999999999999999999999987521000000000  0112223333443               


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCC-----------C
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQ-----------S  155 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~-----------~  155 (226)
                        .+|+|||+||.... .    ...++....++ |+.++.++++++...-  -+++|++||...+...           .
T Consensus        69 --~~d~vi~~a~~~~~-~----~~~~~~~~~~~-n~~~~~~ll~a~~~~~--v~~~v~~SS~~v~~~~~~~~~~E~~~~~  138 (321)
T 3vps_A           69 --DVRLVYHLASHKSV-P----RSFKQPLDYLD-NVDSGRHLLALCTSVG--VPKVVVGSTCEVYGQADTLPTPEDSPLS  138 (321)
T ss_dssp             --TEEEEEECCCCCCH-H----HHTTSTTTTHH-HHHHHHHHHHHHHHHT--CCEEEEEEEGGGGCSCSSSSBCTTSCCC
T ss_pred             --cCCEEEECCccCCh-H----HHHhCHHHHHH-HHHHHHHHHHHHHHcC--CCeEEEecCHHHhCCCCCCCCCCCCCCC
Confidence              89999999997541 1    11122244566 9999999999987652  3599999998764322           2


Q ss_pred             CCchhhHhHHHHHHHHHHHHHHhCCCe-EEEEEecCceeCCcc
Q 027248          156 SMAMYGVTKTALLGLTKALAAEMAPDT-RVNCVAPGFVPTHFA  197 (226)
Q Consensus       156 ~~~~Y~~sKaa~~~~~~~la~e~~~~i-~v~~v~Pg~v~t~~~  197 (226)
                      +...|+.+|.+.+.+++.++.+.  ++ +++.+.|+.+..|..
T Consensus       139 p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~ilRp~~v~G~~~  179 (321)
T 3vps_A          139 PRSPYAASKVGLEMVAGAHQRAS--VAPEVGIVRFFNVYGPGE  179 (321)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHSS--SSCEEEEEEECEEECTTC
T ss_pred             CCChhHHHHHHHHHHHHHHHHHc--CCCceEEEEeccccCcCC
Confidence            36789999999999999988774  78 999999999987753

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.75  E-value=1.7e-17  Score=135.92  Aligned_cols=155  Identities=15%  Similarity=-0.014  Sum_probs=112.5

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCC-CeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEG-ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      .|+++||||+|+||++++++|+++| ++|++++|++++...  ..+...  .+.++.+|++|+++++.+++       .+
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~~~--~~~~~~~D~~d~~~l~~~~~-------~~   73 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELRLQ--GAEVVQGDQDDQVIMELALN-------GA   73 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHHHT--TCEEEECCTTCHHHHHHHHT-------TC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHHHC--CCEEEEecCCCHHHHHHHHh-------cC
Confidence            4789999999999999999999999 999999999876432  223322  46778899999998877765       69


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcC--CCCCCchhhHhHHHHH
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ--PQSSMAMYGVTKTALL  168 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~--~~~~~~~Y~~sKaa~~  168 (226)
                      |+|||++|....      .       ....|+.+...+++++...  .-++||++||.....  .......|..+|.+++
T Consensus        74 d~vi~~a~~~~~------~-------~~~~~~~~~~~~~~aa~~~--gv~~iv~~S~~~~~~~~~~~~~~~y~~sK~~~e  138 (299)
T 2wm3_A           74 YATFIVTNYWES------C-------SQEQEVKQGKLLADLARRL--GLHYVVYSGLENIKKLTAGRLAAAHFDGKGEVE  138 (299)
T ss_dssp             SEEEECCCHHHH------T-------CHHHHHHHHHHHHHHHHHH--TCSEEEECCCCCHHHHTTTSCCCHHHHHHHHHH
T ss_pred             CEEEEeCCCCcc------c-------cchHHHHHHHHHHHHHHHc--CCCEEEEEcCccccccCCCcccCchhhHHHHHH
Confidence            999999985310      0       1234555666666655432  235899966543221  1122467999999999


Q ss_pred             HHHHHHHHHhCCCeEEEEEecCceeCCccc
Q 027248          169 GLTKALAAEMAPDTRVNCVAPGFVPTHFAE  198 (226)
Q Consensus       169 ~~~~~la~e~~~~i~v~~v~Pg~v~t~~~~  198 (226)
                      .+.+.      .+++++.+.||++.+++..
T Consensus       139 ~~~~~------~gi~~~ilrp~~~~~~~~~  162 (299)
T 2wm3_A          139 EYFRD------IGVPMTSVRLPCYFENLLS  162 (299)
T ss_dssp             HHHHH------HTCCEEEEECCEEGGGGGT
T ss_pred             HHHHH------CCCCEEEEeecHHhhhchh
Confidence            88764      2789999999999887654

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.74  E-value=1.2e-17  Score=135.65  Aligned_cols=142  Identities=8%  Similarity=0.063  Sum_probs=107.8

Q ss_pred             EEEEEcCCCchhHHHHHHHHhC--CCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCC
Q 027248           14 VAIVTASTQGIGFGIAERLGLE--GASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id   91 (226)
                      +++||||+|+||++++++|+++  |++|++++|++++.+...    .  ..+.++.+|++++++++++++       .+|
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~----~--~~~~~~~~D~~d~~~~~~~~~-------~~d   67 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALA----A--QGITVRQADYGDEAALTSALQ-------GVE   67 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHH----H--TTCEEEECCTTCHHHHHHHTT-------TCS
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhh----c--CCCeEEEcCCCCHHHHHHHHh-------CCC
Confidence            3899999999999999999998  999999999987654432    1  246778999999998777654       789


Q ss_pred             EEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHhHHHHHHHH
Q 027248           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLT  171 (226)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~  171 (226)
                      +|||+||...                 ..|+.++.++++++...  .-+++|++||..+.   +....|+.+|.+.+.+.
T Consensus        68 ~vi~~a~~~~-----------------~~~~~~~~~l~~a~~~~--~~~~~v~~Ss~~~~---~~~~~y~~sK~~~e~~~  125 (286)
T 2zcu_A           68 KLLLISSSEV-----------------GQRAPQHRNVINAAKAA--GVKFIAYTSLLHAD---TSPLGLADEHIETEKML  125 (286)
T ss_dssp             EEEECC-------------------------CHHHHHHHHHHHH--TCCEEEEEEETTTT---TCCSTTHHHHHHHHHHH
T ss_pred             EEEEeCCCCc-----------------hHHHHHHHHHHHHHHHc--CCCEEEEECCCCCC---CCcchhHHHHHHHHHHH
Confidence            9999998521                 02566777777776543  23599999998775   23357999999999987


Q ss_pred             HHHHHHhCCCeEEEEEecCceeCCc
Q 027248          172 KALAAEMAPDTRVNCVAPGFVPTHF  196 (226)
Q Consensus       172 ~~la~e~~~~i~v~~v~Pg~v~t~~  196 (226)
                      +.      .+++++.+.||++.+++
T Consensus       126 ~~------~~~~~~ilrp~~~~~~~  144 (286)
T 2zcu_A          126 AD------SGIVYTLLRNGWYSENY  144 (286)
T ss_dssp             HH------HCSEEEEEEECCBHHHH
T ss_pred             HH------cCCCeEEEeChHHhhhh
Confidence            63      27999999999887764

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.73  E-value=7.1e-18  Score=137.39  Aligned_cols=150  Identities=15%  Similarity=0.071  Sum_probs=115.9

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id   91 (226)
                      +++++||| +|+||++++++|+++|++|++++|+.+++          ...+.++.+|+++.++++++++      +++|
T Consensus         3 ~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~----------~~~~~~~~~Dl~d~~~~~~~~~------~~~d   65 (286)
T 3gpi_A            3 LSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM----------PAGVQTLIADVTRPDTLASIVH------LRPE   65 (286)
T ss_dssp             CCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC----------CTTCCEEECCTTCGGGCTTGGG------GCCS
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc----------ccCCceEEccCCChHHHHHhhc------CCCC
Confidence            46799999 59999999999999999999999987752          2457788999999998777655      3699


Q ss_pred             EEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCC-----------CCCCchh
Q 027248           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP-----------QSSMAMY  160 (226)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~-----------~~~~~~Y  160 (226)
                      +|||+||..          ..+.+..+++|+.++.++++++...  ..+++|++||...+..           ..+...|
T Consensus        66 ~vih~a~~~----------~~~~~~~~~~n~~~~~~ll~a~~~~--~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y  133 (286)
T 3gpi_A           66 ILVYCVAAS----------EYSDEHYRLSYVEGLRNTLSALEGA--PLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFS  133 (286)
T ss_dssp             EEEECHHHH----------HHC-----CCSHHHHHHHHHHTTTS--CCCEEEEEEEGGGCCCCCSSEECTTSCCCCCSHH
T ss_pred             EEEEeCCCC----------CCCHHHHHHHHHHHHHHHHHHHhhC--CCCEEEEEcccEEEcCCCCCCCCCCCCCCCCChh
Confidence            999999852          2445778899999999999998742  2369999999876432           2246789


Q ss_pred             hHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCccc
Q 027248          161 GVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAE  198 (226)
Q Consensus       161 ~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~~  198 (226)
                      +.+|.+.+.+ +..       ++++.+.|+.+..+...
T Consensus       134 ~~sK~~~E~~-~~~-------~~~~ilR~~~v~G~~~~  163 (286)
T 3gpi_A          134 GKRMLEAEAL-LAA-------YSSTILRFSGIYGPGRL  163 (286)
T ss_dssp             HHHHHHHHHH-GGG-------SSEEEEEECEEEBTTBC
T ss_pred             hHHHHHHHHH-Hhc-------CCeEEEecccccCCCch
Confidence            9999999988 542       77889999998876543

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.72  E-value=1.7e-16  Score=133.30  Aligned_cols=151  Identities=15%  Similarity=0.040  Sum_probs=112.8

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEee-CCCHHHHHHHHHHHHHHhCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH-VSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D-v~~~~~v~~~~~~~~~~~~~   89 (226)
                      ++++++||||+|+||++++++|+++|++|++++|++++..  .+++.. ...+.++.+| ++++++++++++       .
T Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~l~~-~~~v~~v~~D~l~d~~~l~~~~~-------~   73 (352)
T 1xgk_A            4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQA-IPNVTLFQGPLLNNVPLMDTLFE-------G   73 (352)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHT-STTEEEEESCCTTCHHHHHHHHT-------T
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh--HHHHhh-cCCcEEEECCccCCHHHHHHHHh-------c
Confidence            3578999999999999999999999999999999987652  122322 2357788999 999998877665       6


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc-CCEEEEEeccC-CcCCCCCCchhhHhHHHH
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-GSSVVLISSIA-GYQPQSSMAMYGVTKTAL  167 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~-~~~iv~~sS~~-~~~~~~~~~~Y~~sKaa~  167 (226)
                      +|++|||++...  .              ..|..+ .++++++...  . -+++|++||.. ...+.+....|+.||++.
T Consensus        74 ~d~Vi~~a~~~~--~--------------~~~~~~-~~l~~aa~~~--g~v~~~V~~SS~~~~~~~~~~~~~y~~sK~~~  134 (352)
T 1xgk_A           74 AHLAFINTTSQA--G--------------DEIAIG-KDLADAAKRA--GTIQHYIYSSMPDHSLYGPWPAVPMWAPKFTV  134 (352)
T ss_dssp             CSEEEECCCSTT--S--------------CHHHHH-HHHHHHHHHH--SCCSEEEEEECCCGGGTSSCCCCTTTHHHHHH
T ss_pred             CCEEEEcCCCCC--c--------------HHHHHH-HHHHHHHHHc--CCccEEEEeCCccccccCCCCCccHHHHHHHH
Confidence            899999997532  0              225554 5556555442  2 25999999986 333334557899999999


Q ss_pred             HHHHHHHHHHhCCCeEEEEEecCceeCCc
Q 027248          168 LGLTKALAAEMAPDTRVNCVAPGFVPTHF  196 (226)
Q Consensus       168 ~~~~~~la~e~~~~i~v~~v~Pg~v~t~~  196 (226)
                      +.+++.+      +++++.+.||++-+..
T Consensus       135 E~~~~~~------gi~~~ivrpg~~g~~~  157 (352)
T 1xgk_A          135 ENYVRQL------GLPSTFVYAGIYNNNF  157 (352)
T ss_dssp             HHHHHTS------SSCEEEEEECEEGGGC
T ss_pred             HHHHHHc------CCCEEEEecceecCCc
Confidence            9988752      7889999999876544

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.68  E-value=4.4e-16  Score=130.15  Aligned_cols=151  Identities=13%  Similarity=0.067  Sum_probs=110.9

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHH---HHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDE---AVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~---~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      .++|+||||+|+||++++++|++.|++|++++|++.....   ..+++..  ..+.++.+|++|.+++.+++++.     
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~--~~v~~~~~Dl~d~~~l~~~~~~~-----   82 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALED--KGAIIVYGLINEQEAMEKILKEH-----   82 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHH--TTCEEEECCTTCHHHHHHHHHHT-----
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHh--CCcEEEEeecCCHHHHHHHHhhC-----
Confidence            5789999999999999999999999999999998732211   2223332  35778899999999988877653     


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCc----CCCCCCchhhHhH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY----QPQSSMAMYGVTK  164 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~----~~~~~~~~Y~~sK  164 (226)
                      .+|+|||++|..                    |+.+..++++++...- .-.++|+ |+....    .+.++...|+.+|
T Consensus        83 ~~d~Vi~~a~~~--------------------n~~~~~~l~~aa~~~g-~v~~~v~-S~~g~~~~e~~~~~p~~~y~~sK  140 (346)
T 3i6i_A           83 EIDIVVSTVGGE--------------------SILDQIALVKAMKAVG-TIKRFLP-SEFGHDVNRADPVEPGLNMYREK  140 (346)
T ss_dssp             TCCEEEECCCGG--------------------GGGGHHHHHHHHHHHC-CCSEEEC-SCCSSCTTTCCCCTTHHHHHHHH
T ss_pred             CCCEEEECCchh--------------------hHHHHHHHHHHHHHcC-CceEEee-cccCCCCCccCcCCCcchHHHHH
Confidence            899999999861                    6777778888776542 0236665 443321    1224567899999


Q ss_pred             HHHHHHHHHHHHHhCCCeEEEEEecCceeCCcc
Q 027248          165 TALLGLTKALAAEMAPDTRVNCVAPGFVPTHFA  197 (226)
Q Consensus       165 aa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~  197 (226)
                      .+++.+.+.      .++.++.+.||++...+.
T Consensus       141 ~~~e~~l~~------~g~~~tivrpg~~~g~~~  167 (346)
T 3i6i_A          141 RRVRQLVEE------SGIPFTYICCNSIASWPY  167 (346)
T ss_dssp             HHHHHHHHH------TTCCBEEEECCEESSCCC
T ss_pred             HHHHHHHHH------cCCCEEEEEecccccccC
Confidence            998887764      378899999998877553

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.67  E-value=1.6e-15  Score=124.39  Aligned_cols=148  Identities=12%  Similarity=0.107  Sum_probs=104.0

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCc-------chHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHH
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ-------KNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTI   84 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~-------~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (226)
                      +++++||||+|+||++++++|+++|++|++++|+.       ++.+. .+++...  .+.++.+|+++++++.++++   
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~-~~~l~~~--~v~~v~~D~~d~~~l~~~~~---   75 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEEL-IDNYQSL--GVILLEGDINDHETLVKAIK---   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHH-HHHHHHT--TCEEEECCTTCHHHHHHHHT---
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHH-HHHHHhC--CCEEEEeCCCCHHHHHHHHh---
Confidence            46799999999999999999999999999999987       33332 2333332  46788999999998877665   


Q ss_pred             HHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcC------CCCCCc
Q 027248           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ------PQSSMA  158 (226)
Q Consensus        85 ~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~------~~~~~~  158 (226)
                          .+|+|||++|...                    +.+..++++++...- .-+++|+  |..+..      ..|...
T Consensus        76 ----~~d~vi~~a~~~~--------------------~~~~~~l~~aa~~~g-~v~~~v~--S~~g~~~~~~~~~~p~~~  128 (307)
T 2gas_A           76 ----QVDIVICAAGRLL--------------------IEDQVKIIKAIKEAG-NVKKFFP--SEFGLDVDRHDAVEPVRQ  128 (307)
T ss_dssp             ----TCSEEEECSSSSC--------------------GGGHHHHHHHHHHHC-CCSEEEC--SCCSSCTTSCCCCTTHHH
T ss_pred             ----CCCEEEECCcccc--------------------cccHHHHHHHHHhcC-CceEEee--cccccCcccccCCCcchh
Confidence                7999999999642                    223344555543321 0246763  443321      123356


Q ss_pred             hhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCcccc
Q 027248          159 MYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEY  199 (226)
Q Consensus       159 ~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~~~  199 (226)
                      .| .+|++++.+.+.    .  +++++.+.||++.+++...
T Consensus       129 ~y-~sK~~~e~~~~~----~--~i~~~~lrp~~~~~~~~~~  162 (307)
T 2gas_A          129 VF-EEKASIRRVIEA----E--GVPYTYLCCHAFTGYFLRN  162 (307)
T ss_dssp             HH-HHHHHHHHHHHH----H--TCCBEEEECCEETTTTGGG
T ss_pred             HH-HHHHHHHHHHHH----c--CCCeEEEEcceeecccccc
Confidence            79 999999887753    2  7889999999998876543

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.67  E-value=7.9e-16  Score=129.04  Aligned_cols=159  Identities=18%  Similarity=0.160  Sum_probs=116.3

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCC-----CeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEG-----ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g-----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      |++++||||+|+||++++++|+++|     ++|++++|+.....       ....++.++.+|++++++++++++..   
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-------~~~~~~~~~~~Dl~d~~~~~~~~~~~---   70 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-------HEDNPINYVQCDISDPDDSQAKLSPL---   70 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-------CCSSCCEEEECCTTSHHHHHHHHTTC---
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-------cccCceEEEEeecCCHHHHHHHHhcC---
Confidence            4789999999999999999999999     99999999876532       12345778899999999877766521   


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEE-------EEeccCCcCC------
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVV-------LISSIAGYQP------  153 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv-------~~sS~~~~~~------  153 (226)
                       +.+|+|||+||...          ++.++.+++|+.++.++++++.+...+-.++|       ++||...+..      
T Consensus        71 -~~~d~vih~a~~~~----------~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~  139 (364)
T 2v6g_A           71 -TDVTHVFYVTWANR----------STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDP  139 (364)
T ss_dssp             -TTCCEEEECCCCCC----------SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCCCS
T ss_pred             -CCCCEEEECCCCCc----------chHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccCCC
Confidence             24999999999752          13577889999999999999988632234676       7888754321      


Q ss_pred             --------CCCCchhhHhHHHHHHHHHHHHHHhCCC-eEEEEEecCceeCCcc
Q 027248          154 --------QSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNCVAPGFVPTHFA  197 (226)
Q Consensus       154 --------~~~~~~Y~~sKaa~~~~~~~la~e~~~~-i~v~~v~Pg~v~t~~~  197 (226)
                              .+....|    .+.+.+.+.++.+  .+ +++..+.|+.+..+..
T Consensus       140 ~~~E~~~~~~~~~~y----~~~E~~~~~~~~~--~~~~~~~ilRp~~v~G~~~  186 (364)
T 2v6g_A          140 PYTEDLPRLKYMNFY----YDLEDIMLEEVEK--KEGLTWSVHRPGNIFGFSP  186 (364)
T ss_dssp             SBCTTSCCCSSCCHH----HHHHHHHHHHHTT--STTCEEEEEEESSEECCCT
T ss_pred             CCCccccCCccchhh----HHHHHHHHHHhhc--CCCceEEEECCCceeCCCC
Confidence                    1223456    2345555544432  25 9999999999987644

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.66  E-value=4.9e-16  Score=126.54  Aligned_cols=145  Identities=11%  Similarity=0.020  Sum_probs=103.1

Q ss_pred             EEEEEcCCCchhHHHHHHHHhC-CCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCE
Q 027248           14 VAIVTASTQGIGFGIAERLGLE-GASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~   92 (226)
                      +|+||||+|+||++++++|.+. |++|++++|++++....      ....+.++.+|++|+++++++++       .+|+
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~------~~~~v~~~~~D~~d~~~l~~~~~-------~~d~   68 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD------WRGKVSVRQLDYFNQESMVEAFK-------GMDT   68 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG------GBTTBEEEECCTTCHHHHHHHTT-------TCSE
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh------hhCCCEEEEcCCCCHHHHHHHHh-------CCCE
Confidence            3899999999999999999998 99999999998764322      12357889999999998877664       8999


Q ss_pred             EEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHhHHHHHHHHH
Q 027248           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTK  172 (226)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~  172 (226)
                      |||+||....        .       ..|+.++..+++++...  .-++||++||......    ..|..++...  +. 
T Consensus        69 vi~~a~~~~~--------~-------~~~~~~~~~l~~aa~~~--gv~~iv~~Ss~~~~~~----~~~~~~~~~~--~~-  124 (289)
T 3e48_A           69 VVFIPSIIHP--------S-------FKRIPEVENLVYAAKQS--GVAHIIFIGYYADQHN----NPFHMSPYFG--YA-  124 (289)
T ss_dssp             EEECCCCCCS--------H-------HHHHHHHHHHHHHHHHT--TCCEEEEEEESCCSTT----CCSTTHHHHH--HH-
T ss_pred             EEEeCCCCcc--------c-------hhhHHHHHHHHHHHHHc--CCCEEEEEcccCCCCC----CCCccchhHH--HH-
Confidence            9999997531        0       12566666666666542  2258999999754322    2233333211  22 


Q ss_pred             HHHHHhCC-CeEEEEEecCceeCCcc
Q 027248          173 ALAAEMAP-DTRVNCVAPGFVPTHFA  197 (226)
Q Consensus       173 ~la~e~~~-~i~v~~v~Pg~v~t~~~  197 (226)
                        ...+.. +++++.+.||++.+++.
T Consensus       125 --e~~~~~~g~~~~ilrp~~~~~~~~  148 (289)
T 3e48_A          125 --SRLLSTSGIDYTYVRMAMYMDPLK  148 (289)
T ss_dssp             --HHHHHHHCCEEEEEEECEESTTHH
T ss_pred             --HHHHHHcCCCEEEEeccccccccH
Confidence              222223 89999999999998864

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.62  E-value=1.3e-15  Score=128.37  Aligned_cols=136  Identities=18%  Similarity=0.113  Sum_probs=110.5

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCE
Q 027248           14 VAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~   92 (226)
                      +|+||||+|+||++++++|+++|+ +|+..+|+                         +++++++++++       .+|+
T Consensus         2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~-------------------------~d~~~l~~~~~-------~~d~   49 (369)
T 3st7_A            2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ-------------------------TKEEELESALL-------KADF   49 (369)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT-------------------------CCHHHHHHHHH-------HCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC-------------------------CCHHHHHHHhc-------cCCE
Confidence            499999999999999999999998 77777774                         66777777665       5999


Q ss_pred             EEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHhHHHHHHHHH
Q 027248           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTK  172 (226)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~  172 (226)
                      |||+||....         +++.+.+++|+.++.++++++...- .+.++|++||.....    ...|+.+|.+.+.+.+
T Consensus        50 Vih~a~~~~~---------~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~v~~Ss~~~~~----~~~Y~~sK~~~E~~~~  115 (369)
T 3st7_A           50 IVHLAGVNRP---------EHDKEFSLGNVSYLDHVLDILTRNT-KKPAILLSSSIQATQ----DNPYGESKLQGEQLLR  115 (369)
T ss_dssp             EEECCCSBCT---------TCSTTCSSSCCBHHHHHHHHHTTCS-SCCEEEEEEEGGGGS----CSHHHHHHHHHHHHHH
T ss_pred             EEECCcCCCC---------CCHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEeCchhhcC----CCCchHHHHHHHHHHH
Confidence            9999997542         1335567889999999999886531 124899999997654    6789999999999999


Q ss_pred             HHHHHhCCCeEEEEEecCceeCCcc
Q 027248          173 ALAAEMAPDTRVNCVAPGFVPTHFA  197 (226)
Q Consensus       173 ~la~e~~~~i~v~~v~Pg~v~t~~~  197 (226)
                      .++.+.  ++++..+.|+.+..+..
T Consensus       116 ~~~~~~--g~~~~i~R~~~v~G~~~  138 (369)
T 3st7_A          116 EYAEEY--GNTVYIYRWPNLFGKWC  138 (369)
T ss_dssp             HHHHHH--CCCEEEEEECEEECTTC
T ss_pred             HHHHHh--CCCEEEEECCceeCCCC
Confidence            998886  68889999999887643

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.62  E-value=1.5e-14  Score=117.42  Aligned_cols=142  Identities=11%  Similarity=0.029  Sum_probs=104.5

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCE
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~   92 (226)
                      ++++|||| |.||++++++|+++|++|++++|++++.+....      ..+.++.+|+++.+            ...+|+
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~D~~d~~------------~~~~d~   66 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA------SGAEPLLWPGEEPS------------LDGVTH   66 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH------TTEEEEESSSSCCC------------CTTCCE
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh------CCCeEEEecccccc------------cCCCCE
Confidence            57999998 999999999999999999999999877654332      35788899999833            458999


Q ss_pred             EEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCC-----------CCCCchhh
Q 027248           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP-----------QSSMAMYG  161 (226)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~-----------~~~~~~Y~  161 (226)
                      |||+||......        ..          ...+.+++...-.+-+++|++||...+..           ..+...|+
T Consensus        67 vi~~a~~~~~~~--------~~----------~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y~  128 (286)
T 3ius_A           67 LLISTAPDSGGD--------PV----------LAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARG  128 (286)
T ss_dssp             EEECCCCBTTBC--------HH----------HHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHHH
T ss_pred             EEECCCcccccc--------HH----------HHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCCCHHH
Confidence            999999754210        00          11233333321122368999999865422           22355799


Q ss_pred             HhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCc
Q 027248          162 VTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHF  196 (226)
Q Consensus       162 ~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~  196 (226)
                      .+|.+.+.+.+.+     .+++++.+.|+.+..+.
T Consensus       129 ~sK~~~E~~~~~~-----~~~~~~ilRp~~v~G~~  158 (286)
T 3ius_A          129 RWRVMAEQQWQAV-----PNLPLHVFRLAGIYGPG  158 (286)
T ss_dssp             HHHHHHHHHHHHS-----TTCCEEEEEECEEEBTT
T ss_pred             HHHHHHHHHHHhh-----cCCCEEEEeccceECCC
Confidence            9999999988876     57899999999998764

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.61  E-value=4.3e-15  Score=122.63  Aligned_cols=144  Identities=15%  Similarity=0.128  Sum_probs=99.5

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCE
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~   92 (226)
                      |+++||||+|+||++++++|+++|++|++++|+.+......+++...  .+.++.+|++|++++.++++       .+|+
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~--~v~~v~~Dl~d~~~l~~a~~-------~~d~   82 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSL--GAIIVKGELDEHEKLVELMK-------KVDV   82 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHT--TCEEEECCTTCHHHHHHHHT-------TCSE
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcC--CCEEEEecCCCHHHHHHHHc-------CCCE
Confidence            67999999999999999999999999999999985322333333332  46778999999998877765       6999


Q ss_pred             EEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc-CCEEEEEeccCCcCC------CCCCchhhHhHH
Q 027248           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-GSSVVLISSIAGYQP------QSSMAMYGVTKT  165 (226)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~-~~~iv~~sS~~~~~~------~~~~~~Y~~sKa  165 (226)
                      |||+++...                    +.+..++++++...  . -+++|+ |+ .+...      .|....| .+|.
T Consensus        83 vi~~a~~~~--------------------~~~~~~l~~aa~~~--g~v~~~v~-S~-~g~~~~~~~~~~p~~~~y-~sK~  137 (318)
T 2r6j_A           83 VISALAFPQ--------------------ILDQFKILEAIKVA--GNIKRFLP-SD-FGVEEDRINALPPFEALI-ERKR  137 (318)
T ss_dssp             EEECCCGGG--------------------STTHHHHHHHHHHH--CCCCEEEC-SC-CSSCTTTCCCCHHHHHHH-HHHH
T ss_pred             EEECCchhh--------------------hHHHHHHHHHHHhc--CCCCEEEe-ec-cccCcccccCCCCcchhH-HHHH
Confidence            999998531                    22233444444332  1 247764 43 33211      1223568 9999


Q ss_pred             HHHHHHHHHHHHhCCCeEEEEEecCceeCCc
Q 027248          166 ALLGLTKALAAEMAPDTRVNCVAPGFVPTHF  196 (226)
Q Consensus       166 a~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~  196 (226)
                      +++.+.+.      .++.++.+.||++...+
T Consensus       138 ~~e~~~~~------~~~~~~~lr~~~~~~~~  162 (318)
T 2r6j_A          138 MIRRAIEE------ANIPYTYVSANCFASYF  162 (318)
T ss_dssp             HHHHHHHH------TTCCBEEEECCEEHHHH
T ss_pred             HHHHHHHh------cCCCeEEEEcceehhhh
Confidence            98887763      26777888998876543

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.60  E-value=1e-14  Score=119.82  Aligned_cols=151  Identities=15%  Similarity=0.137  Sum_probs=105.3

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchH--H--HHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNV--D--EAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~--~--~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      ++++||||+|+||++++++|+++|++|++++|+....  +  ....++.  ...+.++.+|+++++++.++++       
T Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~l~~~~~-------   75 (313)
T 1qyd_A            5 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFK--QLGAKLIEASLDDHQRLVDALK-------   75 (313)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHH--TTTCEEECCCSSCHHHHHHHHT-------
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHH--hCCeEEEeCCCCCHHHHHHHHh-------
Confidence            5799999999999999999999999999999985421  1  1122232  2357788999999998877665       


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcC-----C-CCCCchhhH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ-----P-QSSMAMYGV  162 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~-----~-~~~~~~Y~~  162 (226)
                      .+|+|||++|.... .               .|+.+..++++++...- +-+++|+ |+.....     + .|....| .
T Consensus        76 ~~d~vi~~a~~~~~-~---------------~~~~~~~~l~~aa~~~g-~v~~~v~-S~~g~~~~~~~~~~~p~~~~y-~  136 (313)
T 1qyd_A           76 QVDVVISALAGGVL-S---------------HHILEQLKLVEAIKEAG-NIKRFLP-SEFGMDPDIMEHALQPGSITF-I  136 (313)
T ss_dssp             TCSEEEECCCCSSS-S---------------TTTTTHHHHHHHHHHSC-CCSEEEC-SCCSSCTTSCCCCCSSTTHHH-H
T ss_pred             CCCEEEECCccccc-h---------------hhHHHHHHHHHHHHhcC-CCceEEe-cCCcCCccccccCCCCCcchH-H
Confidence            79999999997531 1               15566666676665421 0247774 4332111     1 2345678 9


Q ss_pred             hHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCcc
Q 027248          163 TKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFA  197 (226)
Q Consensus       163 sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~  197 (226)
                      +|.+++.+.+.      .+++++.+.||++.+++.
T Consensus       137 sK~~~e~~~~~------~g~~~~ilrp~~~~~~~~  165 (313)
T 1qyd_A          137 DKRKVRRAIEA------ASIPYTYVSSNMFAGYFA  165 (313)
T ss_dssp             HHHHHHHHHHH------TTCCBCEEECCEEHHHHT
T ss_pred             HHHHHHHHHHh------cCCCeEEEEeceeccccc
Confidence            99999887752      267888899998866443

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.59  E-value=1.4e-14  Score=127.44  Aligned_cols=154  Identities=16%  Similarity=0.132  Sum_probs=112.3

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id   91 (226)
                      +++|+||||+|.||++++++|+++|++|++++|+..+.+              .+.+|+.+..         .+.+..+|
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~--------------~v~~d~~~~~---------~~~l~~~D  203 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPG--------------KRFWDPLNPA---------SDLLDGAD  203 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTT--------------CEECCTTSCC---------TTTTTTCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCcc--------------ceeecccchh---------HHhcCCCC
Confidence            578999999999999999999999999999999987531              1566876431         22235899


Q ss_pred             EEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcC-----------CCCCCchh
Q 027248           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ-----------PQSSMAMY  160 (226)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~-----------~~~~~~~Y  160 (226)
                      +|||+||.... .   ..+.+..+..+++|+.++.++++++... ...+++|++||...+.           ..++...|
T Consensus       204 ~Vih~A~~~~~-~---~~~~~~~~~~~~~Nv~gt~~ll~a~a~~-~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~~~~~y  278 (516)
T 3oh8_A          204 VLVHLAGEPIF-G---RFNDSHKEAIRESRVLPTKFLAELVAES-TQCTTMISASAVGFYGHDRGDEILTEESESGDDFL  278 (516)
T ss_dssp             EEEECCCC---------CCGGGHHHHHHHTHHHHHHHHHHHHHC-SSCCEEEEEEEGGGGCSEEEEEEECTTSCCCSSHH
T ss_pred             EEEECCCCccc-c---ccchhHHHHHHHHHHHHHHHHHHHHHhc-CCCCEEEEeCcceEecCCCCCCccCCCCCCCcChH
Confidence            99999997531 1   2344567889999999999999974422 1235899999976543           11245678


Q ss_pred             hHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCc
Q 027248          161 GVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHF  196 (226)
Q Consensus       161 ~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~  196 (226)
                      +.+|...+.+.+.+. +  .|++++.+.||.+..+.
T Consensus       279 ~~~~~~~E~~~~~~~-~--~gi~~~ilRp~~v~Gp~  311 (516)
T 3oh8_A          279 AEVCRDWEHATAPAS-D--AGKRVAFIRTGVALSGR  311 (516)
T ss_dssp             HHHHHHHHHTTHHHH-H--TTCEEEEEEECEEEBTT
T ss_pred             HHHHHHHHHHHHHHH-h--CCCCEEEEEeeEEECCC
Confidence            888887776544321 1  28999999999998874

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.58  E-value=1.9e-14  Score=118.82  Aligned_cols=144  Identities=13%  Similarity=0.105  Sum_probs=99.2

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCc-c----hHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ-K----NVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~-~----~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      ++++||||+|+||++++++|+++|++|++++|+. .    .......++..  ..+.++.+|++|++++.++++      
T Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~--~~v~~v~~D~~d~~~l~~a~~------   76 (321)
T 3c1o_A            5 EKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRS--MGVTIIEGEMEEHEKMVSVLK------   76 (321)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHH--TTCEEEECCTTCHHHHHHHHT------
T ss_pred             cEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhc--CCcEEEEecCCCHHHHHHHHc------
Confidence            5699999999999999999999999999999986 2    11222223332  347788999999998877765      


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc-CCEEEEEeccCCcC-----C-CCCCchh
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-GSSVVLISSIAGYQ-----P-QSSMAMY  160 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~-~~~iv~~sS~~~~~-----~-~~~~~~Y  160 (226)
                       .+|+|||++|...                    +.+..++++++...  . -+++|  .|..+..     + .|....|
T Consensus        77 -~~d~vi~~a~~~~--------------------~~~~~~l~~aa~~~--g~v~~~v--~S~~g~~~~~~~~~~p~~~~y  131 (321)
T 3c1o_A           77 -QVDIVISALPFPM--------------------ISSQIHIINAIKAA--GNIKRFL--PSDFGCEEDRIKPLPPFESVL  131 (321)
T ss_dssp             -TCSEEEECCCGGG--------------------SGGGHHHHHHHHHH--CCCCEEE--CSCCSSCGGGCCCCHHHHHHH
T ss_pred             -CCCEEEECCCccc--------------------hhhHHHHHHHHHHh--CCccEEe--ccccccCccccccCCCcchHH
Confidence             6999999998631                    22334444444332  1 24776  3443321     1 1224579


Q ss_pred             hHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCc
Q 027248          161 GVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHF  196 (226)
Q Consensus       161 ~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~  196 (226)
                       .+|++++.+.+.    .  +++++.+.||++..++
T Consensus       132 -~sK~~~e~~~~~----~--~~~~~~lrp~~~~~~~  160 (321)
T 3c1o_A          132 -EKKRIIRRAIEA----A--ALPYTYVSANCFGAYF  160 (321)
T ss_dssp             -HHHHHHHHHHHH----H--TCCBEEEECCEEHHHH
T ss_pred             -HHHHHHHHHHHH----c--CCCeEEEEeceecccc
Confidence             999999988763    2  6777788899876653

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.55  E-value=5.9e-14  Score=115.03  Aligned_cols=146  Identities=13%  Similarity=0.111  Sum_probs=99.6

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchH--HHH---HHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNV--DEA---VVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~--~~~---~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      ++++||||+|+||++++++|+++|++|++++|+....  ...   ..++.  ...+.++.+|+++++++.++++      
T Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~--~~~v~~v~~D~~d~~~l~~~~~------   76 (308)
T 1qyc_A            5 SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK--ASGANIVHGSIDDHASLVEAVK------   76 (308)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH--TTTCEEECCCTTCHHHHHHHHH------
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHH--hCCCEEEEeccCCHHHHHHHHc------
Confidence            6799999999999999999999999999999986432  111   22232  2357788999999998877766      


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcC----C-CCCCchhhH
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ----P-QSSMAMYGV  162 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~----~-~~~~~~Y~~  162 (226)
                       .+|+|||++|...                    +.+...+++++...- +-+++|+ |+.....    + .|....| .
T Consensus        77 -~~d~vi~~a~~~~--------------------~~~~~~l~~aa~~~g-~v~~~v~-S~~g~~~~~~~~~~p~~~~y-~  132 (308)
T 1qyc_A           77 -NVDVVISTVGSLQ--------------------IESQVNIIKAIKEVG-TVKRFFP-SEFGNDVDNVHAVEPAKSVF-E  132 (308)
T ss_dssp             -TCSEEEECCCGGG--------------------SGGGHHHHHHHHHHC-CCSEEEC-SCCSSCTTSCCCCTTHHHHH-H
T ss_pred             -CCCEEEECCcchh--------------------hhhHHHHHHHHHhcC-CCceEee-cccccCccccccCCcchhHH-H
Confidence             6999999998531                    222344445444321 0247763 4432111    1 1224578 9


Q ss_pred             hHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCc
Q 027248          163 TKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHF  196 (226)
Q Consensus       163 sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~  196 (226)
                      +|++++.+.+.    .  +++++.+.||++.+++
T Consensus       133 sK~~~e~~~~~----~--~~~~~~~r~~~~~~~~  160 (308)
T 1qyc_A          133 VKAKVRRAIEA----E--GIPYTYVSSNCFAGYF  160 (308)
T ss_dssp             HHHHHHHHHHH----H--TCCBEEEECCEEHHHH
T ss_pred             HHHHHHHHHHh----c--CCCeEEEEeceecccc
Confidence            99999887764    2  6778888999886643

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.54  E-value=1.1e-15  Score=124.92  Aligned_cols=110  Identities=23%  Similarity=0.277  Sum_probs=86.1

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      +++||+++||||+||+|+++++.|++.|++|++++|+.++.++..+++... ..+.++.+|++++++++++++       
T Consensus       116 ~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~-~~~~~~~~D~~~~~~~~~~~~-------  187 (287)
T 1lu9_A          116 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR-FKVNVTAAETADDASRAEAVK-------  187 (287)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH-HTCCCEEEECCSHHHHHHHTT-------
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEecCCCHHHHHHHHH-------
Confidence            468999999999999999999999999999999999998888887777543 135567889999998776655       


Q ss_pred             CCCEEEEcCCCCCCCCccccccH-HHHHHHHHHHHHHHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKE-SVLDKLWDINVKSSI  126 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~-~~~~~~~~~N~~~~~  126 (226)
                      .+|+||||+|......+..+.+. ++|..++++|+.+++
T Consensus       188 ~~DvlVn~ag~g~~~~~~~~~~~~~~~~~~~dvn~~~~~  226 (287)
T 1lu9_A          188 GAHFVFTAGAIGLELLPQAAWQNESSIEIVADYNAQPPL  226 (287)
T ss_dssp             TCSEEEECCCTTCCSBCHHHHTTCTTCCEEEECCCSSSC
T ss_pred             hCCEEEECCCccccCCChhHcCchHHHHHHHHhhhhhhH
Confidence            58999999986432223333333 556668888888776

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.39  E-value=1.1e-11  Score=101.29  Aligned_cols=150  Identities=21%  Similarity=0.239  Sum_probs=101.7

Q ss_pred             EEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCEEE
Q 027248           15 AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVV   94 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~li   94 (226)
                      |+||||||.||++++++|.++|++|+++.|++...            .   +..|    +.       ..+....+|.+|
T Consensus         3 ILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~------------~---~~~~----~~-------~~~~l~~~d~vi   56 (298)
T 4b4o_A            3 VLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG------------R---ITWD----EL-------AASGLPSCDAAV   56 (298)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT------------E---EEHH----HH-------HHHCCCSCSEEE
T ss_pred             EEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC------------e---eecc----hh-------hHhhccCCCEEE
Confidence            89999999999999999999999999999986531            1   1111    11       112346899999


Q ss_pred             EcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCC-----------CCCCchhhHh
Q 027248           95 SNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP-----------QSSMAMYGVT  163 (226)
Q Consensus        95 ~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~-----------~~~~~~Y~~s  163 (226)
                      |.||... .......+.+..+..++.|+.++.++.+++...-.+..++|+.||...+.+           ......|+..
T Consensus        57 hla~~~i-~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~~~~~  135 (298)
T 4b4o_A           57 NLAGENI-LNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDFFSNL  135 (298)
T ss_dssp             ECCCCCS-SCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSHHHHH
T ss_pred             EeccCcc-cchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccCCccccchhHHH
Confidence            9998542 233333456667788899999998888877665444456888888765422           1233445555


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCc
Q 027248          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHF  196 (226)
Q Consensus       164 Kaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~  196 (226)
                      |...+..     ..... ++++..+.||.+..|-
T Consensus       136 ~~~~e~~-----~~~~~~~~~~~~~r~~~v~g~~  164 (298)
T 4b4o_A          136 VTKWEAA-----ARLPGDSTRQVVVRSGVVLGRG  164 (298)
T ss_dssp             HHHHHHH-----HCCSSSSSEEEEEEECEEECTT
T ss_pred             HHHHHHH-----HHhhccCCceeeeeeeeEEcCC
Confidence            5443321     11233 8999999999987763

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.29  E-value=7.9e-12  Score=103.80  Aligned_cols=149  Identities=15%  Similarity=0.123  Sum_probs=102.9

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCCC-------eEEEEecCc--chHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHH
Q 027248           14 VAIVTASTQGIGFGIAERLGLEGA-------SVVVSSRKQ--KNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTI   84 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (226)
                      +++||||+|.||..++..|+++|.       +|+++++.+  ++.+.....+.......  . .|+++.++..+.+    
T Consensus         6 kVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~--~-~di~~~~~~~~a~----   78 (327)
T 1y7t_A            6 RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPL--L-AGLEATDDPKVAF----   78 (327)
T ss_dssp             EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTT--E-EEEEEESCHHHHT----
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcccccc--c-CCeEeccChHHHh----
Confidence            599999999999999999999996       799999875  22333233343221122  2 4666544433333    


Q ss_pred             HHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCC--------cC-CCC
Q 027248           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG--------YQ-PQS  155 (226)
Q Consensus        85 ~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~--------~~-~~~  155 (226)
                         ...|++||.||....  +  ..+   ..+.+++|+.++..+.+++..+-..+.+++++|+...        .. +.+
T Consensus        79 ---~~~D~Vih~Ag~~~~--~--~~~---~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~~~~~~~~~~~~  148 (327)
T 1y7t_A           79 ---KDADYALLVGAAPRK--A--GME---RRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALIAYKNAPGLN  148 (327)
T ss_dssp             ---TTCSEEEECCCCCCC--T--TCC---HHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTTSC
T ss_pred             ---CCCCEEEECCCcCCC--C--CCC---HHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhHHHHHHHcCCCC
Confidence               379999999997642  1  122   2567899999999999998775212357888887541        11 244


Q ss_pred             CCchhhHhHHHHHHHHHHHHHHhC
Q 027248          156 SMAMYGVTKTALLGLTKALAAEMA  179 (226)
Q Consensus       156 ~~~~Y~~sKaa~~~~~~~la~e~~  179 (226)
                      +...|+.+|...+.+.+.++.++.
T Consensus       149 p~~~yg~tkl~~er~~~~~a~~~g  172 (327)
T 1y7t_A          149 PRNFTAMTRLDHNRAKAQLAKKTG  172 (327)
T ss_dssp             GGGEEECCHHHHHHHHHHHHHHHT
T ss_pred             hhheeccchHHHHHHHHHHHHHhC
Confidence            566799999999999988888763

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=99.21  E-value=6.1e-11  Score=92.81  Aligned_cols=79  Identities=18%  Similarity=0.198  Sum_probs=62.0

Q ss_pred             ccCCCEEEEEcC----------------CCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCC
Q 027248            9 RFQGKVAIVTAS----------------TQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN   72 (226)
Q Consensus         9 ~~~gk~vlItGa----------------~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~   72 (226)
                      +++||+++||||                +||+|++++++|+++|++|++++++.. ++.      ..  .+  -.+|+++
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~~------~~--g~--~~~dv~~   73 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LPT------PP--FV--KRVDVMT   73 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CCC------CT--TE--EEEECCS
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-ccc------CC--CC--eEEccCc
Confidence            478999999999                689999999999999999999988652 110      11  12  2468888


Q ss_pred             HHHHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 027248           73 GQQRKNLINQTIEKFGKIDVVVSNAAANP  101 (226)
Q Consensus        73 ~~~v~~~~~~~~~~~~~id~li~nag~~~  101 (226)
                      .++   +++.+.+.++++|++|||||+..
T Consensus        74 ~~~---~~~~v~~~~~~~Dili~~Aav~d   99 (226)
T 1u7z_A           74 ALE---MEAAVNASVQQQNIFIGCAAVAD   99 (226)
T ss_dssp             HHH---HHHHHHHHGGGCSEEEECCBCCS
T ss_pred             HHH---HHHHHHHhcCCCCEEEECCcccC
Confidence            554   66777788899999999999864

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=99.09  E-value=7.8e-11  Score=92.41  Aligned_cols=93  Identities=17%  Similarity=0.187  Sum_probs=67.1

Q ss_pred             CCCEEEEEcC----------------CCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHH
Q 027248           11 QGKVAIVTAS----------------TQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQ   74 (226)
Q Consensus        11 ~gk~vlItGa----------------~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~   74 (226)
                      +||+++||||                +|++|+++|++|+++|++|++++|......       .....+.  ..|+.   
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~-------~~~~~~~--~~~v~---   69 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP-------EPHPNLS--IREIT---   69 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC-------CCCTTEE--EEECC---
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-------cCCCCeE--EEEHh---
Confidence            5899999999                788999999999999999999999753210       0011222  23454   


Q ss_pred             HHHHHHHHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHH
Q 027248           75 QRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDK  116 (226)
Q Consensus        75 ~v~~~~~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~  116 (226)
                      +++++++.+.+.++.+|++|+|||+.. ..+....+.+++..
T Consensus        70 s~~em~~~v~~~~~~~Dili~aAAvsD-~~p~~~~~~e~~~~  110 (232)
T 2gk4_A           70 NTKDLLIEMQERVQDYQVLIHSMAVSD-YTPVYMTGLEEVQA  110 (232)
T ss_dssp             SHHHHHHHHHHHGGGCSEEEECSBCCS-EEEEEEEEHHHHHH
T ss_pred             HHHHHHHHHHHhcCCCCEEEEcCcccc-ccchhhcchhhhhc
Confidence            566677777888899999999999875 45555555555543

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.00  E-value=1.6e-09  Score=75.81  Aligned_cols=74  Identities=19%  Similarity=0.102  Sum_probs=60.8

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCC-CeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEG-ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      +++++|+|+ |++|+++++.|.+.| ++|++++|++++.+...      ...+..+.+|+++.++++++++       .+
T Consensus         5 ~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~~-------~~   70 (118)
T 3ic5_A            5 RWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN------RMGVATKQVDAKDEAGLAKALG-------GF   70 (118)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH------TTTCEEEECCTTCHHHHHHHTT-------TC
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH------hCCCcEEEecCCCHHHHHHHHc-------CC
Confidence            478999999 999999999999999 88999999987765543      2245667889999887766653       89


Q ss_pred             CEEEEcCCC
Q 027248           91 DVVVSNAAA   99 (226)
Q Consensus        91 d~li~nag~   99 (226)
                      |++|++++.
T Consensus        71 d~vi~~~~~   79 (118)
T 3ic5_A           71 DAVISAAPF   79 (118)
T ss_dssp             SEEEECSCG
T ss_pred             CEEEECCCc
Confidence            999999963

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.96  E-value=7e-10  Score=85.22  Aligned_cols=103  Identities=17%  Similarity=0.241  Sum_probs=73.7

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      .|++++||||+||||+++++.+...|++|++++|++++.+..    .+.+...   .+|.++.+..+.+.+...  .+.+
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~----~~~g~~~---~~d~~~~~~~~~~~~~~~--~~~~  108 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML----SRLGVEY---VGDSRSVDFADEILELTD--GYGV  108 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH----HTTCCSE---EEETTCSTHHHHHHHHTT--TCCE
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HHcCCCE---EeeCCcHHHHHHHHHHhC--CCCC
Confidence            589999999999999999999999999999999987765443    2234332   248877654444333221  1369


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccC
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~  149 (226)
                      |++|+|+|..                           ..+.+++.++++|++|.+++..
T Consensus       109 D~vi~~~g~~---------------------------~~~~~~~~l~~~G~~v~~g~~~  140 (198)
T 1pqw_A          109 DVVLNSLAGE---------------------------AIQRGVQILAPGGRFIELGKKD  140 (198)
T ss_dssp             EEEEECCCTH---------------------------HHHHHHHTEEEEEEEEECSCGG
T ss_pred             eEEEECCchH---------------------------HHHHHHHHhccCCEEEEEcCCC
Confidence            9999999720                           0345566777789999998764

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.96  E-value=7.4e-10  Score=82.24  Aligned_cols=79  Identities=16%  Similarity=0.128  Sum_probs=66.3

Q ss_pred             CCchhHHHHHHHHhCCCeEEEEecCcchHH---HHHHHHHhcCCcEEEEEeeCCCH--HHHHHHHHHHHHHhCCCCEEEE
Q 027248           21 TQGIGFGIAERLGLEGASVVVSSRKQKNVD---EAVVKLKARGIEVIGVVCHVSNG--QQRKNLINQTIEKFGKIDVVVS   95 (226)
Q Consensus        21 ~~giG~a~~~~l~~~g~~v~~~~r~~~~~~---~~~~~~~~~~~~~~~~~~Dv~~~--~~v~~~~~~~~~~~~~id~li~   95 (226)
                      ++-++.+.++.|++.|++|++..|+.+...   ...+.+.+.|.++..+.+|++++  ++++++++.+.+.+|+ |+|||
T Consensus        25 s~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVLVn  103 (157)
T 3gxh_A           25 SGLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVLVH  103 (157)
T ss_dssp             EBCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEEEE
T ss_pred             cCCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEEEE
Confidence            345789999999999999999988765432   23555666688888999999999  9999999999998999 99999


Q ss_pred             cCCCC
Q 027248           96 NAAAN  100 (226)
Q Consensus        96 nag~~  100 (226)
                      |||+.
T Consensus       104 nAgg~  108 (157)
T 3gxh_A          104 CLANY  108 (157)
T ss_dssp             CSBSH
T ss_pred             CCCCC
Confidence            99974

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.89  E-value=3.2e-09  Score=88.10  Aligned_cols=104  Identities=13%  Similarity=0.249  Sum_probs=75.1

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      .|++++||||+||||.++++.+...|++|++++|++++++.+ +++   +...   .+|.++.+++.+.+.++..  +.+
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~---g~~~---~~d~~~~~~~~~~~~~~~~--~~~  215 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQI---GFDA---AFNYKTVNSLEEALKKASP--DGY  215 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT---TCSE---EEETTSCSCHHHHHHHHCT--TCE
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-Hhc---CCcE---EEecCCHHHHHHHHHHHhC--CCC
Confidence            589999999999999999999999999999999988776555 333   3332   3488774444444444332  589


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCC
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG  150 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~  150 (226)
                      |++|+|+|.            +               ..+.++..++++|+++.+++..+
T Consensus       216 d~vi~~~g~------------~---------------~~~~~~~~l~~~G~~v~~g~~~~  248 (333)
T 1v3u_A          216 DCYFDNVGG------------E---------------FLNTVLSQMKDFGKIAICGAISV  248 (333)
T ss_dssp             EEEEESSCH------------H---------------HHHHHHTTEEEEEEEEECCCCC-
T ss_pred             eEEEECCCh------------H---------------HHHHHHHHHhcCCEEEEEecccc
Confidence            999999982            0               02345566677889999886543

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.89  E-value=4.4e-09  Score=88.61  Aligned_cols=108  Identities=14%  Similarity=0.171  Sum_probs=77.2

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      .+++++++|+|+ |+||+++++.+...|++|++++|++++++...+.+   +..   +.+|.++.+++++++.       
T Consensus       163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~---g~~---~~~~~~~~~~l~~~~~-------  228 (369)
T 2eez_A          163 GVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF---GGR---VITLTATEANIKKSVQ-------  228 (369)
T ss_dssp             BBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---TTS---EEEEECCHHHHHHHHH-------
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc---Cce---EEEecCCHHHHHHHHh-------
Confidence            478999999999 99999999999999999999999987766554333   333   4568888877666553       


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCC
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG  150 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~  150 (226)
                      ..|++|+++|.... .                   .+..+.+..++.|++++.||++++..+
T Consensus       229 ~~DvVi~~~g~~~~-~-------------------~~~li~~~~l~~mk~gg~iV~v~~~~g  270 (369)
T 2eez_A          229 HADLLIGAVLVPGA-K-------------------APKLVTRDMLSLMKEGAVIVDVAVDQG  270 (369)
T ss_dssp             HCSEEEECCC---------------------------CCSCHHHHTTSCTTCEEEECC----
T ss_pred             CCCEEEECCCCCcc-c-------------------cchhHHHHHHHhhcCCCEEEEEecCCC
Confidence            78999999986421 0                   112335667778888889999998753

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=98.88  E-value=1.2e-12  Score=112.86  Aligned_cols=45  Identities=31%  Similarity=0.352  Sum_probs=39.6

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHH
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAV   53 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~   53 (226)
                      ..+.||+++|||++ +||+++++.|...|++|+++++++.+.....
T Consensus       261 ~~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa  305 (488)
T 3ond_A          261 VMIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQAT  305 (488)
T ss_dssp             CCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CcccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence            45889999999987 9999999999999999999999887655544

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.88  E-value=1.3e-08  Score=86.82  Aligned_cols=81  Identities=20%  Similarity=0.283  Sum_probs=70.1

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCC---CeEEEEecCcchHHHHHHHHHhcC-CcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEG---ASVVVSSRKQKNVDEAVVKLKARG-IEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g---~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      ++++|+|+ |++|+++++.|++.|   .+|++++|+.++++...+++...+ .++..+.+|+++.+++++++++.     
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~-----   75 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV-----   75 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH-----
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh-----
Confidence            46899999 899999999999998   389999999999988888876542 35778899999999999988865     


Q ss_pred             CCCEEEEcCCC
Q 027248           89 KIDVVVSNAAA   99 (226)
Q Consensus        89 ~id~li~nag~   99 (226)
                      ++|+|||++|.
T Consensus        76 ~~DvVin~ag~   86 (405)
T 4ina_A           76 KPQIVLNIALP   86 (405)
T ss_dssp             CCSEEEECSCG
T ss_pred             CCCEEEECCCc
Confidence            79999999985

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.85  E-value=6.9e-09  Score=86.59  Aligned_cols=104  Identities=13%  Similarity=0.145  Sum_probs=77.6

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      .|++++|+|++||||+++++.+...|++|++++|++++++... +   .+...   ..|.++.+++.+.+.++..  +.+
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~-~---~g~~~---~~d~~~~~~~~~~~~~~~~--~~~  239 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFR-S---IGGEV---FIDFTKEKDIVGAVLKATD--GGA  239 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHH-H---TTCCE---EEETTTCSCHHHHHHHHHT--SCE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHH-H---cCCce---EEecCccHhHHHHHHHHhC--CCC
Confidence            5899999999999999999999999999999999988764432 2   23332   2488865555555555433  279


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccC
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~  149 (226)
                      |++|+|+|..                          ...+.+++.++++|+++.+++..
T Consensus       240 D~vi~~~g~~--------------------------~~~~~~~~~l~~~G~iv~~g~~~  272 (347)
T 2hcy_A          240 HGVINVSVSE--------------------------AAIEASTRYVRANGTTVLVGMPA  272 (347)
T ss_dssp             EEEEECSSCH--------------------------HHHHHHTTSEEEEEEEEECCCCT
T ss_pred             CEEEECCCcH--------------------------HHHHHHHHHHhcCCEEEEEeCCC
Confidence            9999999841                          03466677777889999998765

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.76  E-value=2.5e-08  Score=82.72  Aligned_cols=103  Identities=18%  Similarity=0.185  Sum_probs=73.8

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      .|++++|+||+||||.++++.+...|++|++++|++++++.+. ++   +.+.   ..|.++.+..+.+.+...  ...+
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~---g~~~---~~d~~~~~~~~~i~~~~~--~~~~  215 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETAR-KL---GCHH---TINYSTQDFAEVVREITG--GKGV  215 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH---TCSE---EEETTTSCHHHHHHHHHT--TCCE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc---CCCE---EEECCCHHHHHHHHHHhC--CCCC
Confidence            5899999999999999999999999999999999987766543 23   3332   247777654444433221  1369


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccC
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~  149 (226)
                      |++|+|+|. .                          ..+.++..++++|+++.+++..
T Consensus       216 d~vi~~~g~-~--------------------------~~~~~~~~l~~~G~iv~~g~~~  247 (333)
T 1wly_A          216 DVVYDSIGK-D--------------------------TLQKSLDCLRPRGMCAAYGHAS  247 (333)
T ss_dssp             EEEEECSCT-T--------------------------THHHHHHTEEEEEEEEECCCTT
T ss_pred             eEEEECCcH-H--------------------------HHHHHHHhhccCCEEEEEecCC
Confidence            999999984 1                          1334455666778998887654

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.75  E-value=2.5e-09  Score=87.06  Aligned_cols=82  Identities=11%  Similarity=0.212  Sum_probs=61.0

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      .+++||+++|||++ |+|+++++.|++.| +|++++|+.++.+...+++...+.....+.+|+++.          .+.+
T Consensus       124 ~~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~----------~~~~  191 (287)
T 1nvt_A          124 GRVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGL----------DVDL  191 (287)
T ss_dssp             CCCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECT----------TCCC
T ss_pred             CCcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeH----------HHhh
Confidence            35789999999997 99999999999999 999999999888887777654210000112354441          2345


Q ss_pred             CCCCEEEEcCCCCC
Q 027248           88 GKIDVVVSNAAANP  101 (226)
Q Consensus        88 ~~id~li~nag~~~  101 (226)
                      +.+|+||||+|...
T Consensus       192 ~~~DilVn~ag~~~  205 (287)
T 1nvt_A          192 DGVDIIINATPIGM  205 (287)
T ss_dssp             TTCCEEEECSCTTC
T ss_pred             CCCCEEEECCCCCC
Confidence            78999999999754

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.75  E-value=1.3e-08  Score=84.19  Aligned_cols=104  Identities=16%  Similarity=0.151  Sum_probs=75.1

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      .|++++|+||+||||.++++.+...|++|++++|++++++.+.+ +   +.+.   .+|.++.+..+.+.+...  ...+
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~-~---g~~~---~~~~~~~~~~~~~~~~~~--~~~~  210 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-A---GAWQ---VINYREEDLVERLKEITG--GKKV  210 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-H---TCSE---EEETTTSCHHHHHHHHTT--TCCE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c---CCCE---EEECCCccHHHHHHHHhC--CCCc
Confidence            58999999999999999999999999999999999877655433 3   3332   247777655444433221  1369


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCC
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG  150 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~  150 (226)
                      |++|+|+|. .                          ..+.++..++++|+++.+++..+
T Consensus       211 D~vi~~~g~-~--------------------------~~~~~~~~l~~~G~iv~~g~~~~  243 (327)
T 1qor_A          211 RVVYDSVGR-D--------------------------TWERSLDCLQRRGLMVSFGNSSG  243 (327)
T ss_dssp             EEEEECSCG-G--------------------------GHHHHHHTEEEEEEEEECCCTTC
T ss_pred             eEEEECCch-H--------------------------HHHHHHHHhcCCCEEEEEecCCC
Confidence            999999982 1                          03455666777899999987654

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.70  E-value=2.2e-09  Score=94.50  Aligned_cols=100  Identities=15%  Similarity=0.151  Sum_probs=67.3

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      +++||+++|||| ||+|++++..|++.|++|++++|+.++++...+++.   .++.    ++.+   ++.+      ..+
T Consensus       361 ~l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~---~~~~----~~~d---l~~~------~~~  423 (523)
T 2o7s_A          361 PLASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAIG---GKAL----SLTD---LDNY------HPE  423 (523)
T ss_dssp             -----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTT---C-CE----ETTT---TTTC--------C
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC---Ccee----eHHH---hhhc------ccc
Confidence            467899999999 599999999999999999999999988877766652   2221    2322   1100      113


Q ss_pred             CCCEEEEcCCCCCCC----CccccccHHHHHHHHHHHHHHH
Q 027248           89 KIDVVVSNAAANPSV----DSILQTKESVLDKLWDINVKSS  125 (226)
Q Consensus        89 ~id~li~nag~~~~~----~~~~~~~~~~~~~~~~~N~~~~  125 (226)
                      .+|+||||+|+....    .++.+.+.++|..++++|+.+.
T Consensus       424 ~~DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~  464 (523)
T 2o7s_A          424 DGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPR  464 (523)
T ss_dssp             CSEEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSS
T ss_pred             CceEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCc
Confidence            589999999975311    3455566677888999998765

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.68  E-value=3.2e-08  Score=85.42  Aligned_cols=77  Identities=14%  Similarity=0.116  Sum_probs=61.3

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id   91 (226)
                      +|+++|+| +|++|+++++.|++.|++|++++|+.++.+...+++    ..+..+.+|+++.++++++++       .+|
T Consensus         3 ~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~----~~~~~~~~Dv~d~~~l~~~l~-------~~D   70 (450)
T 1ff9_A            3 TKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV----QHSTPISLDVNDDAALDAEVA-------KHD   70 (450)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTC----TTEEEEECCTTCHHHHHHHHT-------TSS
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhc----CCceEEEeecCCHHHHHHHHc-------CCc
Confidence            68899998 799999999999999999999999876654443222    236678899999988776653       799


Q ss_pred             EEEEcCCCC
Q 027248           92 VVVSNAAAN  100 (226)
Q Consensus        92 ~li~nag~~  100 (226)
                      +|||+++..
T Consensus        71 vVIn~a~~~   79 (450)
T 1ff9_A           71 LVISLIPYT   79 (450)
T ss_dssp             EEEECCC--
T ss_pred             EEEECCccc
Confidence            999999864

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.68  E-value=3.3e-08  Score=82.72  Aligned_cols=103  Identities=17%  Similarity=0.209  Sum_probs=72.9

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      .|++++|+||+||||.++++.+...|++|++++|++++++.+ +++   +.+.   .+|.++.+..+.+.+...  .+.+
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~---g~~~---~~~~~~~~~~~~~~~~~~--~~~~  232 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKL---GAAA---GFNYKKEDFSEATLKFTK--GAGV  232 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH---TCSE---EEETTTSCHHHHHHHHTT--TSCE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc---CCcE---EEecCChHHHHHHHHHhc--CCCc
Confidence            589999999999999999999999999999999998777655 333   3332   347776554433332211  1369


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccC
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~  149 (226)
                      |++|+|+|...                           .+.++..++++|+++.++...
T Consensus       233 d~vi~~~G~~~---------------------------~~~~~~~l~~~G~iv~~G~~~  264 (354)
T 2j8z_A          233 NLILDCIGGSY---------------------------WEKNVNCLALDGRWVLYGLMG  264 (354)
T ss_dssp             EEEEESSCGGG---------------------------HHHHHHHEEEEEEEEECCCTT
T ss_pred             eEEEECCCchH---------------------------HHHHHHhccCCCEEEEEeccC
Confidence            99999998410                           233445566788999887654

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.66  E-value=2.9e-08  Score=82.39  Aligned_cols=103  Identities=18%  Similarity=0.260  Sum_probs=74.7

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      .|++++|+|++|+||.+.++.+...|++|++++|++++++.+.+++   +.+.   ..|.++.+..+.+.+..   .+.+
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~~~~~---~~~~  219 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEEL---GFDG---AIDYKNEDLAAGLKREC---PKGI  219 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT---CCSE---EEETTTSCHHHHHHHHC---TTCE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCCE---EEECCCHHHHHHHHHhc---CCCc
Confidence            5899999999999999999999999999999999987766553333   3332   24776655443333322   2479


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccC
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~  149 (226)
                      |++|+|+|..                           ..+.++..++++|+++.++...
T Consensus       220 d~vi~~~g~~---------------------------~~~~~~~~l~~~G~iv~~G~~~  251 (336)
T 4b7c_A          220 DVFFDNVGGE---------------------------ILDTVLTRIAFKARIVLCGAIS  251 (336)
T ss_dssp             EEEEESSCHH---------------------------HHHHHHTTEEEEEEEEECCCGG
T ss_pred             eEEEECCCcc---------------------------hHHHHHHHHhhCCEEEEEeecc
Confidence            9999999830                           1345556677789999988765

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.66  E-value=2.2e-07  Score=76.31  Aligned_cols=84  Identities=15%  Similarity=0.263  Sum_probs=64.8

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecC---cchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHH
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRK---QKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQT   83 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~---~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   83 (226)
                      .+++||+++|+|+ ||+|++++..|++.|+ +|.+++|+   .++.+++.+++....+ +.+...++.+.+++.+.+.  
T Consensus       150 ~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~-~~~~~~~~~~~~~l~~~l~--  225 (315)
T 3tnl_A          150 HDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTD-CKAQLFDIEDHEQLRKEIA--  225 (315)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSS-CEEEEEETTCHHHHHHHHH--
T ss_pred             CCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcC-CceEEeccchHHHHHhhhc--
Confidence            4678999999997 7999999999999998 79999999   7777777777765432 2333457777665544433  


Q ss_pred             HHHhCCCCEEEEcCCCC
Q 027248           84 IEKFGKIDVVVSNAAAN  100 (226)
Q Consensus        84 ~~~~~~id~li~nag~~  100 (226)
                           ..|+|||+....
T Consensus       226 -----~aDiIINaTp~G  237 (315)
T 3tnl_A          226 -----ESVIFTNATGVG  237 (315)
T ss_dssp             -----TCSEEEECSSTT
T ss_pred             -----CCCEEEECccCC
Confidence                 789999987653

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.60  E-value=1.1e-07  Score=82.28  Aligned_cols=80  Identities=18%  Similarity=0.196  Sum_probs=62.3

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhC-CCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLE-GASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      .++++|+++|+|+ |++|++++..|++. |++|++++|+.++.+.+.++     ..+..+.+|+++.+++.++++     
T Consensus        19 ~~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~-----~~~~~~~~D~~d~~~l~~~l~-----   87 (467)
T 2axq_A           19 GRHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP-----SGSKAISLDVTDDSALDKVLA-----   87 (467)
T ss_dssp             ----CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG-----GTCEEEECCTTCHHHHHHHHH-----
T ss_pred             cCCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh-----cCCcEEEEecCCHHHHHHHHc-----
Confidence            4567899999997 99999999999998 78899999998776655433     134566789999888776654     


Q ss_pred             hCCCCEEEEcCCCC
Q 027248           87 FGKIDVVVSNAAAN  100 (226)
Q Consensus        87 ~~~id~li~nag~~  100 (226)
                        .+|+|||+++..
T Consensus        88 --~~DvVIn~tp~~   99 (467)
T 2axq_A           88 --DNDVVISLIPYT   99 (467)
T ss_dssp             --TSSEEEECSCGG
T ss_pred             --CCCEEEECCchh
Confidence              799999999863

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.59  E-value=2.5e-08  Score=83.41  Aligned_cols=103  Identities=16%  Similarity=0.220  Sum_probs=72.7

Q ss_pred             CC--CEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248           11 QG--KVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus        11 ~g--k~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      .|  ++++|+||+||||.++++.+...|+ +|+++++++++++.+.+++   +.+.   .+|.++.+..+.    +.+..
T Consensus       158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~---g~~~---~~d~~~~~~~~~----~~~~~  227 (357)
T 2zb4_A          158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSEL---GFDA---AINYKKDNVAEQ----LRESC  227 (357)
T ss_dssp             TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTS---CCSE---EEETTTSCHHHH----HHHHC
T ss_pred             CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc---CCce---EEecCchHHHHH----HHHhc
Confidence            47  9999999999999999999999999 9999999887765554323   3332   347776443332    22222


Q ss_pred             -CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCC
Q 027248           88 -GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG  150 (226)
Q Consensus        88 -~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~  150 (226)
                       +.+|++|+|+|.            +               ..+.++..++++|+++.++....
T Consensus       228 ~~~~d~vi~~~G~------------~---------------~~~~~~~~l~~~G~iv~~G~~~~  264 (357)
T 2zb4_A          228 PAGVDVYFDNVGG------------N---------------ISDTVISQMNENSHIILCGQISQ  264 (357)
T ss_dssp             TTCEEEEEESCCH------------H---------------HHHHHHHTEEEEEEEEECCCGGG
T ss_pred             CCCCCEEEECCCH------------H---------------HHHHHHHHhccCcEEEEECCccc
Confidence             379999999982            0               12345566677889998876543

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=98.58  E-value=1.8e-07  Score=78.22  Aligned_cols=103  Identities=17%  Similarity=0.235  Sum_probs=74.0

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      .|++++|+||+|++|.+.++.+...|++|+++++++++++.+.+ +   +.+..   .|..+.+..+.+.+..   .+.+
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l---Ga~~~---~~~~~~~~~~~~~~~~---~~g~  236 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACER-L---GAKRG---INYRSEDFAAVIKAET---GQGV  236 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-H---TCSEE---EETTTSCHHHHHHHHH---SSCE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c---CCCEE---EeCCchHHHHHHHHHh---CCCc
Confidence            58999999999999999999999999999999999887765432 3   33332   3666655444333322   3579


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCC
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG  150 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~  150 (226)
                      |++|+++|..                           ..+.++..++++|+++.+++..+
T Consensus       237 Dvvid~~g~~---------------------------~~~~~~~~l~~~G~iv~~g~~~~  269 (353)
T 4dup_A          237 DIILDMIGAA---------------------------YFERNIASLAKDGCLSIIAFLGG  269 (353)
T ss_dssp             EEEEESCCGG---------------------------GHHHHHHTEEEEEEEEECCCTTC
T ss_pred             eEEEECCCHH---------------------------HHHHHHHHhccCCEEEEEEecCC
Confidence            9999999841                           02344556677889998886654

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.55  E-value=4.4e-07  Score=75.19  Aligned_cols=150  Identities=11%  Similarity=0.100  Sum_probs=100.1

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCC-------eEEEEecC----cchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHH
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGA-------SVVVSSRK----QKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLIN   81 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~-------~v~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   81 (226)
                      .+|+||||+|.+|..++..|+..|.       +|++++++    +++++....++........   .|+....+..+.  
T Consensus         6 ~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~---~~i~~~~~~~~a--   80 (329)
T 1b8p_A            6 MRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLL---AGMTAHADPMTA--   80 (329)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTE---EEEEEESSHHHH--
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhccccc---CcEEEecCcHHH--
Confidence            4699999999999999999999885       79999998    5555554555554211121   244333332232  


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCC--------cC-
Q 027248           82 QTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG--------YQ-  152 (226)
Q Consensus        82 ~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~--------~~-  152 (226)
                           +...|++|+.||.....    ..+.   .+.+..|+.....+.+.+..+-..++++|++|....        .. 
T Consensus        81 -----l~~aD~Vi~~ag~~~~~----g~~r---~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~~t~~~~~~~~  148 (329)
T 1b8p_A           81 -----FKDADVALLVGARPRGP----GMER---KDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTNAYIAMKSAP  148 (329)
T ss_dssp             -----TTTCSEEEECCCCCCCT----TCCH---HHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCT
T ss_pred             -----hCCCCEEEEeCCCCCCC----CCCH---HHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHHHHHHHHHHcC
Confidence                 34889999999975421    1233   345788999888888888776324568999987442        12 


Q ss_pred             CCCCCchhhHhHHHHHHHHHHHHHHhC
Q 027248          153 PQSSMAMYGVTKTALLGLTKALAAEMA  179 (226)
Q Consensus       153 ~~~~~~~Y~~sKaa~~~~~~~la~e~~  179 (226)
                      +.|....|+.++.--..+.+.++..+.
T Consensus       149 ~~p~~~v~g~t~Ld~~r~~~~la~~lg  175 (329)
T 1b8p_A          149 SLPAKNFTAMLRLDHNRALSQIAAKTG  175 (329)
T ss_dssp             TSCGGGEEECCHHHHHHHHHHHHHHHT
T ss_pred             CCCHHHEEEeecHHHHHHHHHHHHHhC
Confidence            334444588887666667777777764

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.55  E-value=1.2e-07  Score=76.46  Aligned_cols=77  Identities=12%  Similarity=0.161  Sum_probs=58.8

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      .+++||+++|+|+ ||+|++++..|++.|++|++++|+.++.+.+.+++...+ .+     +..+.+++       .+  
T Consensus       115 ~~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~-~~-----~~~~~~~~-------~~--  178 (271)
T 1nyt_A          115 FIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG-SI-----QALSMDEL-------EG--  178 (271)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS-SE-----EECCSGGG-------TT--
T ss_pred             cCcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccC-Ce-----eEecHHHh-------cc--
Confidence            3578999999998 799999999999999999999999988888777664422 22     22222221       11  


Q ss_pred             CCCCEEEEcCCCC
Q 027248           88 GKIDVVVSNAAAN  100 (226)
Q Consensus        88 ~~id~li~nag~~  100 (226)
                      +..|+|||++|..
T Consensus       179 ~~~DivVn~t~~~  191 (271)
T 1nyt_A          179 HEFDLIINATSSG  191 (271)
T ss_dssp             CCCSEEEECCSCG
T ss_pred             CCCCEEEECCCCC
Confidence            5899999999974

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=98.53  E-value=2.4e-07  Score=79.80  Aligned_cols=109  Identities=17%  Similarity=0.235  Sum_probs=76.5

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEee--CC---------CHHHHHHH
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH--VS---------NGQQRKNL   79 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D--v~---------~~~~v~~~   79 (226)
                      .|++++|+|++|+||.+.++.+...|++|+++++++++++.+ +   +.+.+..+-..|  +.         +.++.+.+
T Consensus       220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~-~---~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  295 (447)
T 4a0s_A          220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV-R---ALGCDLVINRAELGITDDIADDPRRVVETGRKL  295 (447)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-H---HTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-H---hcCCCEEEecccccccccccccccccchhhhHH
Confidence            589999999999999999999999999999999888776544 2   234433221111  11         12445556


Q ss_pred             HHHHHHHhC-CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCC
Q 027248           80 INQTIEKFG-KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG  150 (226)
Q Consensus        80 ~~~~~~~~~-~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~  150 (226)
                      .+++.+..+ .+|++|+++|..            .               .+.++..++++|++|.+++..+
T Consensus       296 ~~~v~~~~g~g~Dvvid~~G~~------------~---------------~~~~~~~l~~~G~iv~~G~~~~  340 (447)
T 4a0s_A          296 AKLVVEKAGREPDIVFEHTGRV------------T---------------FGLSVIVARRGGTVVTCGSSSG  340 (447)
T ss_dssp             HHHHHHHHSSCCSEEEECSCHH------------H---------------HHHHHHHSCTTCEEEESCCTTC
T ss_pred             HHHHHHHhCCCceEEEECCCch------------H---------------HHHHHHHHhcCCEEEEEecCCC
Confidence            677766554 699999999831            0               1445566777899999987654

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=98.53  E-value=1.9e-07  Score=77.75  Aligned_cols=102  Identities=17%  Similarity=0.187  Sum_probs=73.1

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhC-CCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh--
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLE-GASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF--   87 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--   87 (226)
                      .|++++|+|++++||..+++.+... |++|+++++++++++.+. ++   +.+.   ..|.++.+..+.    +.+..  
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~-~~---g~~~---~~~~~~~~~~~~----~~~~~~~  238 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-RA---GADY---VINASMQDPLAE----IRRITES  238 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH-HH---TCSE---EEETTTSCHHHH----HHHHTTT
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hh---CCCE---EecCCCccHHHH----HHHHhcC
Confidence            5899999999999999999999999 999999999987765542 33   3332   237666543332    22222  


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccC
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~  149 (226)
                      +.+|++|+++|..                          ...+.++..++++|+++.++...
T Consensus       239 ~~~d~vi~~~g~~--------------------------~~~~~~~~~l~~~G~iv~~g~~~  274 (347)
T 1jvb_A          239 KGVDAVIDLNNSE--------------------------KTLSVYPKALAKQGKYVMVGLFG  274 (347)
T ss_dssp             SCEEEEEESCCCH--------------------------HHHTTGGGGEEEEEEEEECCSSC
T ss_pred             CCceEEEECCCCH--------------------------HHHHHHHHHHhcCCEEEEECCCC
Confidence            5899999999841                          12345566677788999887654

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=98.50  E-value=4.4e-07  Score=75.46  Aligned_cols=102  Identities=16%  Similarity=0.242  Sum_probs=73.3

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh--C
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF--G   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--~   88 (226)
                      .|++++|+|++|++|...++.+...|++|+++++++++++.+. ++   +.+.   .+|.++++..    +++.+..  .
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~---ga~~---~~d~~~~~~~----~~~~~~~~~~  234 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-AL---GADE---TVNYTHPDWP----KEVRRLTGGK  234 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH---TCSE---EEETTSTTHH----HHHHHHTTTT
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hc---CCCE---EEcCCcccHH----HHHHHHhCCC
Confidence            5899999999999999999999999999999999987776553 33   3332   2477765432    2333322  3


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCC
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG  150 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~  150 (226)
                      .+|++|+++| ..                          ..+.++..++++|+++.+++...
T Consensus       235 ~~d~vi~~~g-~~--------------------------~~~~~~~~l~~~G~~v~~g~~~~  269 (343)
T 2eih_A          235 GADKVVDHTG-AL--------------------------YFEGVIKATANGGRIAIAGASSG  269 (343)
T ss_dssp             CEEEEEESSC-SS--------------------------SHHHHHHHEEEEEEEEESSCCCS
T ss_pred             CceEEEECCC-HH--------------------------HHHHHHHhhccCCEEEEEecCCC
Confidence            7999999998 21                          02444556677889999887654

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.48  E-value=1.4e-07  Score=78.53  Aligned_cols=104  Identities=16%  Similarity=0.270  Sum_probs=74.3

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      .|++++|+|++|+||.++++.+...|++|++++|++++++.+.+++   +...   .+|.++.+++.+.+.++..  +.+
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~---g~~~---~~d~~~~~~~~~~~~~~~~--~~~  226 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKF---GFDD---AFNYKEESDLTAALKRCFP--NGI  226 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTS---CCSE---EEETTSCSCSHHHHHHHCT--TCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCce---EEecCCHHHHHHHHHHHhC--CCC
Confidence            5899999999999999999999999999999999987765544232   4332   2377765444444443321  479


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccC
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~  149 (226)
                      |++|+|+|. .                          ..+.++..++++|+++.++...
T Consensus       227 d~vi~~~g~-~--------------------------~~~~~~~~l~~~G~~v~~G~~~  258 (345)
T 2j3h_A          227 DIYFENVGG-K--------------------------MLDAVLVNMNMHGRIAVCGMIS  258 (345)
T ss_dssp             EEEEESSCH-H--------------------------HHHHHHTTEEEEEEEEECCCGG
T ss_pred             cEEEECCCH-H--------------------------HHHHHHHHHhcCCEEEEEcccc
Confidence            999999983 0                          1345566667788999887654

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=98.48  E-value=2.7e-07  Score=76.40  Aligned_cols=102  Identities=16%  Similarity=0.290  Sum_probs=72.6

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh--C
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF--G   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--~   88 (226)
                      .|++++|+||+|++|.+.++.+...|++|+++++++++++.+ ++   .+.+..   .|..+.+..+    ++.+..  .
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~---~ga~~~---~~~~~~~~~~----~~~~~~~~~  216 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIA-KE---YGAEYL---INASKEDILR----QVLKFTNGK  216 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HH---TTCSEE---EETTTSCHHH----HHHHHTTTS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HH---cCCcEE---EeCCCchHHH----HHHHHhCCC
Confidence            589999999999999999999999999999999988776633 22   243332   3666544333    333332  3


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCC
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG  150 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~  150 (226)
                      .+|++|+++|..                           ..+.++..++++|+++.++...+
T Consensus       217 g~D~vid~~g~~---------------------------~~~~~~~~l~~~G~iv~~G~~~~  251 (334)
T 3qwb_A          217 GVDASFDSVGKD---------------------------TFEISLAALKRKGVFVSFGNASG  251 (334)
T ss_dssp             CEEEEEECCGGG---------------------------GHHHHHHHEEEEEEEEECCCTTC
T ss_pred             CceEEEECCChH---------------------------HHHHHHHHhccCCEEEEEcCCCC
Confidence            699999999841                           12344566677899999887643

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=98.47  E-value=2.4e-07  Score=76.48  Aligned_cols=102  Identities=18%  Similarity=0.188  Sum_probs=73.8

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh--C
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF--G   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--~   88 (226)
                      .|++++|+||+|++|.+.++.+...|++|+++++++++++.+. ++   +.+..   .|.++.+..+.    +.+..  .
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~---Ga~~~---~~~~~~~~~~~----~~~~~~~~  208 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-AL---GAWET---IDYSHEDVAKR----VLELTDGK  208 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HH---TCSEE---EETTTSCHHHH----HHHHTTTC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc---CCCEE---EeCCCccHHHH----HHHHhCCC
Confidence            5899999999999999999999999999999999988776543 33   33322   36665544333    33332  3


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCC
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG  150 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~  150 (226)
                      .+|++|+++|..                           ..+.++..++++|+++.++...+
T Consensus       209 g~Dvvid~~g~~---------------------------~~~~~~~~l~~~G~iv~~g~~~~  243 (325)
T 3jyn_A          209 KCPVVYDGVGQD---------------------------TWLTSLDSVAPRGLVVSFGNASG  243 (325)
T ss_dssp             CEEEEEESSCGG---------------------------GHHHHHTTEEEEEEEEECCCTTC
T ss_pred             CceEEEECCChH---------------------------HHHHHHHHhcCCCEEEEEecCCC
Confidence            799999999841                           12344666777899999987654

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=98.44  E-value=1.3e-06  Score=72.78  Aligned_cols=103  Identities=11%  Similarity=0.100  Sum_probs=72.6

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id   91 (226)
                      +++++|+||+|++|...++.+...|++|+++++++++++.+. ++   +.+..   .|..+.+..+.+.+....  ..+|
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~~---Ga~~~---~~~~~~~~~~~v~~~~~~--~g~D  235 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK-DI---GAAHV---LNEKAPDFEATLREVMKA--EQPR  235 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH-HH---TCSEE---EETTSTTHHHHHHHHHHH--HCCC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc---CCCEE---EECCcHHHHHHHHHHhcC--CCCc
Confidence            489999999999999999999999999999999998876553 33   43332   366554443333332221  2799


Q ss_pred             EEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCC
Q 027248           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG  150 (226)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~  150 (226)
                      ++|+++|..            .               .+.++..++++|+++.+++..+
T Consensus       236 ~vid~~g~~------------~---------------~~~~~~~l~~~G~iv~~G~~~~  267 (349)
T 3pi7_A          236 IFLDAVTGP------------L---------------ASAIFNAMPKRARWIIYGRLDP  267 (349)
T ss_dssp             EEEESSCHH------------H---------------HHHHHHHSCTTCEEEECCCSCC
T ss_pred             EEEECCCCh------------h---------------HHHHHhhhcCCCEEEEEeccCC
Confidence            999999841            0               1234566777899999986554

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.44  E-value=4.5e-07  Score=65.50  Aligned_cols=74  Identities=16%  Similarity=0.282  Sum_probs=58.2

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id   91 (226)
                      .++++|+|+ |.+|+++++.|.+.|++|+++++++++.+...+    .+  ..++.+|.++++.++++      .....|
T Consensus         6 ~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~----~~--~~~~~gd~~~~~~l~~~------~~~~~d   72 (141)
T 3llv_A            6 RYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED----EG--FDAVIADPTDESFYRSL------DLEGVS   72 (141)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----TT--CEEEECCTTCHHHHHHS------CCTTCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----CC--CcEEECCCCCHHHHHhC------CcccCC
Confidence            467999998 779999999999999999999999877655443    22  45678999999876543      124789


Q ss_pred             EEEEcCC
Q 027248           92 VVVSNAA   98 (226)
Q Consensus        92 ~li~nag   98 (226)
                      ++|.+.+
T Consensus        73 ~vi~~~~   79 (141)
T 3llv_A           73 AVLITGS   79 (141)
T ss_dssp             EEEECCS
T ss_pred             EEEEecC
Confidence            9997766

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.43  E-value=5.2e-07  Score=75.35  Aligned_cols=77  Identities=13%  Similarity=0.239  Sum_probs=57.7

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh--C
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF--G   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--~   88 (226)
                      .|++++|+||+||+|.++++.+...|++|++++|++++++.. ++   .+.+.   .+|..+.+..+.+    .+..  .
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~---~ga~~---~~d~~~~~~~~~~----~~~~~~~  238 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-LQ---NGAHE---VFNHREVNYIDKI----KKYVGEK  238 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HH---TTCSE---EEETTSTTHHHHH----HHHHCTT
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH-HH---cCCCE---EEeCCCchHHHHH----HHHcCCC
Confidence            589999999999999999999999999999999998776633 22   24332   2477765544333    3332  2


Q ss_pred             CCCEEEEcCC
Q 027248           89 KIDVVVSNAA   98 (226)
Q Consensus        89 ~id~li~nag   98 (226)
                      .+|++|+|+|
T Consensus       239 ~~D~vi~~~G  248 (351)
T 1yb5_A          239 GIDIIIEMLA  248 (351)
T ss_dssp             CEEEEEESCH
T ss_pred             CcEEEEECCC
Confidence            7999999998

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=98.42  E-value=8.3e-07  Score=74.47  Aligned_cols=99  Identities=16%  Similarity=0.193  Sum_probs=69.8

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCc---chHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ---KNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      +|++++|+|+ |++|...++.+...|++|+++++++   ++++.+ +++   +.+  .+  | .+ +..+.+.+  . . 
T Consensus       180 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~-~~~---ga~--~v--~-~~-~~~~~~~~--~-~-  244 (366)
T 2cdc_A          180 NCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVI-EET---KTN--YY--N-SS-NGYDKLKD--S-V-  244 (366)
T ss_dssp             TTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHH-HHH---TCE--EE--E-CT-TCSHHHHH--H-H-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHH-HHh---CCc--ee--c-hH-HHHHHHHH--h-C-
Confidence            3999999999 9999999999999999999999998   665332 333   322  22  5 54 22222222  1 2 


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHH-HHHhhhhhcCCEEEEEeccCC
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLL-QDAAPHLQKGSSVVLISSIAG  150 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~-~~~~~~l~~~~~iv~~sS~~~  150 (226)
                      +.+|++|+++|...                          .+ +.+++.++++|++|+++...+
T Consensus       245 ~~~d~vid~~g~~~--------------------------~~~~~~~~~l~~~G~iv~~g~~~~  282 (366)
T 2cdc_A          245 GKFDVIIDATGADV--------------------------NILGNVIPLLGRNGVLGLFGFSTS  282 (366)
T ss_dssp             CCEEEEEECCCCCT--------------------------HHHHHHGGGEEEEEEEEECSCCCS
T ss_pred             CCCCEEEECCCChH--------------------------HHHHHHHHHHhcCCEEEEEecCCC
Confidence            68999999998521                          13 566777777889999876543

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.41  E-value=1.8e-07  Score=67.48  Aligned_cols=77  Identities=16%  Similarity=0.193  Sum_probs=56.3

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      +++++++|+|+ |++|+.+++.|.+.|++|+++++++++.+..    .+.+  ...+.+|.++.+.++++      ..+.
T Consensus         4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~----~~~~--~~~~~~d~~~~~~l~~~------~~~~   70 (144)
T 2hmt_A            4 IKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAY----ASYA--THAVIANATEENELLSL------GIRN   70 (144)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTT----TTTC--SEEEECCTTCHHHHHTT------TGGG
T ss_pred             CcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HHhC--CEEEEeCCCCHHHHHhc------CCCC
Confidence            34678999998 9999999999999999999999987654332    2222  34567899887654432      1347


Q ss_pred             CCEEEEcCCC
Q 027248           90 IDVVVSNAAA   99 (226)
Q Consensus        90 id~li~nag~   99 (226)
                      .|++|++++.
T Consensus        71 ~d~vi~~~~~   80 (144)
T 2hmt_A           71 FEYVIVAIGA   80 (144)
T ss_dssp             CSEEEECCCS
T ss_pred             CCEEEECCCC
Confidence            9999998874

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=98.41  E-value=1e-06  Score=71.44  Aligned_cols=82  Identities=13%  Similarity=0.087  Sum_probs=61.6

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      .+++||+++|+|+ ||+|++++..|++.|+ +|.+++|+.++.+.+.+++......+.+...+..+.   ++.+.     
T Consensus       123 ~~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l---~~~l~-----  193 (283)
T 3jyo_A          123 PNAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGI---EDVIA-----  193 (283)
T ss_dssp             TTCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTH---HHHHH-----
T ss_pred             cCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHH---HHHHh-----
Confidence            3678999999998 7999999999999998 699999999999988888875543333333444332   22222     


Q ss_pred             hCCCCEEEEcCCCC
Q 027248           87 FGKIDVVVSNAAAN  100 (226)
Q Consensus        87 ~~~id~li~nag~~  100 (226)
                        ..|+|||+....
T Consensus       194 --~~DiVInaTp~G  205 (283)
T 3jyo_A          194 --AADGVVNATPMG  205 (283)
T ss_dssp             --HSSEEEECSSTT
T ss_pred             --cCCEEEECCCCC
Confidence              679999987653

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=98.41  E-value=3.6e-07  Score=75.90  Aligned_cols=102  Identities=18%  Similarity=0.226  Sum_probs=72.0

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh--C
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF--G   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--~   88 (226)
                      .|++++|+|+++++|...++.+...|++|+++++++++++.+.+ +   +.+..   .|..+.+..+    .+.+..  .
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l---ga~~~---~~~~~~~~~~----~~~~~~~~~  212 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR-L---GAAYV---IDTSTAPLYE----TVMELTNGI  212 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-H---TCSEE---EETTTSCHHH----HHHHHTTTS
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-C---CCcEE---EeCCcccHHH----HHHHHhCCC
Confidence            58999999999999999999999999999999999988765543 3   33332   3666544333    333332  3


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCC
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG  150 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~  150 (226)
                      .+|++|+++|...                           ....+..++++|+++.++...+
T Consensus       213 g~Dvvid~~g~~~---------------------------~~~~~~~l~~~G~iv~~G~~~~  247 (340)
T 3gms_A          213 GADAAIDSIGGPD---------------------------GNELAFSLRPNGHFLTIGLLSG  247 (340)
T ss_dssp             CEEEEEESSCHHH---------------------------HHHHHHTEEEEEEEEECCCTTS
T ss_pred             CCcEEEECCCChh---------------------------HHHHHHHhcCCCEEEEEeecCC
Confidence            7999999998410                           0112245667899999987654

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=98.39  E-value=9.1e-07  Score=73.55  Aligned_cols=101  Identities=19%  Similarity=0.298  Sum_probs=67.7

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC--
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG--   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~--   88 (226)
                      .|++++|+||+|++|...++.+...|++|+++++++++++.+.+ +   +.+..   .|.. .+    +.+++.+..+  
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~---ga~~v---~~~~-~~----~~~~v~~~~~~~  226 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKS-V---GADIV---LPLE-EG----WAKAVREATGGA  226 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-H---TCSEE---EESS-TT----HHHHHHHHTTTS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c---CCcEE---ecCc-hh----HHHHHHHHhCCC
Confidence            58999999999999999999999999999999999988754433 3   33332   2444 22    3334444332  


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCC
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG  150 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~  150 (226)
                      .+|++|+++|...                           .+.++..++++|+++.++...+
T Consensus       227 g~Dvvid~~g~~~---------------------------~~~~~~~l~~~G~iv~~G~~~~  261 (342)
T 4eye_A          227 GVDMVVDPIGGPA---------------------------FDDAVRTLASEGRLLVVGFAAG  261 (342)
T ss_dssp             CEEEEEESCC--C---------------------------HHHHHHTEEEEEEEEEC-----
T ss_pred             CceEEEECCchhH---------------------------HHHHHHhhcCCCEEEEEEccCC
Confidence            6999999998411                           2244556677889998876543

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=98.37  E-value=1.8e-06  Score=72.42  Aligned_cols=106  Identities=13%  Similarity=0.116  Sum_probs=72.1

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      +++++++|+|+ |++|+++++.+...|++|++++|++++++.+.+....   .+   ..+..+.+++.+.+       ..
T Consensus       165 l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~---~~---~~~~~~~~~~~~~~-------~~  230 (361)
T 1pjc_A          165 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS---RV---ELLYSNSAEIETAV-------AE  230 (361)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG---GS---EEEECCHHHHHHHH-------HT
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCc---ee---EeeeCCHHHHHHHH-------cC
Confidence            67899999999 9999999999999999999999999887776554422   12   12233444433322       27


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccC
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~  149 (226)
                      .|++|++++......+                    ..+.+..+..|++++.|+.+++..
T Consensus       231 ~DvVI~~~~~~~~~~~--------------------~li~~~~~~~~~~g~~ivdv~~~~  270 (361)
T 1pjc_A          231 ADLLIGAVLVPGRRAP--------------------ILVPASLVEQMRTGSVIVDVAVDQ  270 (361)
T ss_dssp             CSEEEECCCCTTSSCC--------------------CCBCHHHHTTSCTTCEEEETTCTT
T ss_pred             CCEEEECCCcCCCCCC--------------------eecCHHHHhhCCCCCEEEEEecCC
Confidence            9999999986431111                    011223445566778888888764

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=98.35  E-value=1.2e-06  Score=73.84  Aligned_cols=107  Identities=14%  Similarity=0.166  Sum_probs=75.3

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      .+.|++++|+|+ |+||+++++.+...|++|++.+|++++++...+.+   +..+   ..+..+.+++++++.       
T Consensus       165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~---g~~~---~~~~~~~~~l~~~l~-------  230 (377)
T 2vhw_A          165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF---CGRI---HTRYSSAYELEGAVK-------  230 (377)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---TTSS---EEEECCHHHHHHHHH-------
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhc---CCee---EeccCCHHHHHHHHc-------
Confidence            478999999998 99999999999999999999999988766554433   2222   234455555544432       


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccC
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~  149 (226)
                      ..|++|++++.... .    ..               ..+.+..++.|++++.||++++..
T Consensus       231 ~aDvVi~~~~~p~~-~----t~---------------~li~~~~l~~mk~g~~iV~va~~~  271 (377)
T 2vhw_A          231 RADLVIGAVLVPGA-K----AP---------------KLVSNSLVAHMKPGAVLVDIAIDQ  271 (377)
T ss_dssp             HCSEEEECCCCTTS-C----CC---------------CCBCHHHHTTSCTTCEEEEGGGGT
T ss_pred             CCCEEEECCCcCCC-C----Cc---------------ceecHHHHhcCCCCcEEEEEecCC
Confidence            68999999886431 1    10               112345566777788999998654

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=98.34  E-value=3.8e-06  Score=68.90  Aligned_cols=84  Identities=12%  Similarity=0.224  Sum_probs=61.7

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecC---cchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHH
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRK---QKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQT   83 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~---~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   83 (226)
                      .+++||+++|+|+ ||.|++++..|++.|+ +|.++.|+   .++.+++.+++....+ ..+...+..+.+...+.+.  
T Consensus       144 ~~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~-~~v~~~~~~~l~~~~~~l~--  219 (312)
T 3t4e_A          144 FDMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTD-CVVTVTDLADQHAFTEALA--  219 (312)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSS-CEEEEEETTCHHHHHHHHH--
T ss_pred             CCcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccC-cceEEechHhhhhhHhhcc--
Confidence            4678999999997 8999999999999998 79999999   7777777777765432 2233446666433222222  


Q ss_pred             HHHhCCCCEEEEcCCCC
Q 027248           84 IEKFGKIDVVVSNAAAN  100 (226)
Q Consensus        84 ~~~~~~id~li~nag~~  100 (226)
                           ..|+|||+....
T Consensus       220 -----~~DiIINaTp~G  231 (312)
T 3t4e_A          220 -----SADILTNGTKVG  231 (312)
T ss_dssp             -----HCSEEEECSSTT
T ss_pred             -----CceEEEECCcCC
Confidence                 679999987654

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=98.32  E-value=1.1e-06  Score=73.54  Aligned_cols=102  Identities=17%  Similarity=0.189  Sum_probs=71.0

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh-CC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF-GK   89 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-~~   89 (226)
                      .|++++|+||+|++|...++.+...|++|+++++++++++.+.+    .+.+..   .|..+.+. .   +.+.+.. +.
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~----~Ga~~~---~~~~~~~~-~---~~~~~~~~~g  231 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS----LGCDRP---INYKTEPV-G---TVLKQEYPEG  231 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTCSEE---EETTTSCH-H---HHHHHHCTTC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH----cCCcEE---EecCChhH-H---HHHHHhcCCC
Confidence            58999999999999999999999999999999998877655432    344332   35554332 2   2222222 47


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCC
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG  150 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~  150 (226)
                      +|++|+++|..                           ..+.++..++++|+++.+++..+
T Consensus       232 ~D~vid~~g~~---------------------------~~~~~~~~l~~~G~iv~~g~~~~  265 (362)
T 2c0c_A          232 VDVVYESVGGA---------------------------MFDLAVDALATKGRLIVIGFISG  265 (362)
T ss_dssp             EEEEEECSCTH---------------------------HHHHHHHHEEEEEEEEECCCGGG
T ss_pred             CCEEEECCCHH---------------------------HHHHHHHHHhcCCEEEEEeCCCC
Confidence            99999999830                           12345556667889999887653

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=98.30  E-value=2.7e-06  Score=70.59  Aligned_cols=102  Identities=21%  Similarity=0.295  Sum_probs=71.4

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      .|++++|+|+ |++|...++.+...|++|+.+++++++++.+. +   .+.+.   ..|.++.+..+.+    .+..+.+
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~---lGa~~---~~d~~~~~~~~~~----~~~~~~~  231 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-E---LGADL---VVNPLKEDAAKFM----KEKVGGV  231 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-H---TTCSE---EECTTTSCHHHHH----HHHHSSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-H---CCCCE---EecCCCccHHHHH----HHHhCCC
Confidence            5899999999 88999999999999999999999987776543 2   34332   2477654332222    2222689


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCC
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG  150 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~  150 (226)
                      |++|+++|...                          ..+.++..++++|+++.+++...
T Consensus       232 d~vid~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~~~  265 (339)
T 1rjw_A          232 HAAVVTAVSKP--------------------------AFQSAYNSIRRGGACVLVGLPPE  265 (339)
T ss_dssp             EEEEESSCCHH--------------------------HHHHHHHHEEEEEEEEECCCCSS
T ss_pred             CEEEECCCCHH--------------------------HHHHHHHHhhcCCEEEEecccCC
Confidence            99999998410                          23455566677889998876543

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=98.27  E-value=2.3e-05  Score=64.68  Aligned_cols=115  Identities=16%  Similarity=0.131  Sum_probs=73.0

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCC--CeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEG--ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      .+++||||+|.+|..++..|+.+|  .+|++++++++  +....++........+ .. ++...+.++.       +...
T Consensus         9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~~~~~~v-~~-~~~t~d~~~a-------l~ga   77 (326)
T 1smk_A            9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHMDTGAVV-RG-FLGQQQLEAA-------LTGM   77 (326)
T ss_dssp             EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTSCSSCEE-EE-EESHHHHHHH-------HTTC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhcccccceE-EE-EeCCCCHHHH-------cCCC
Confidence            469999999999999999999998  78999998876  3333334432221111 11 2223333333       3489


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEe
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~s  146 (226)
                      |++|+.||......    .+.   ...+.+|+.+...+.+.+...- .++.|+++|
T Consensus        78 DvVi~~ag~~~~~g----~~r---~dl~~~N~~~~~~i~~~i~~~~-p~~~viv~S  125 (326)
T 1smk_A           78 DLIIVPAGVPRKPG----MTR---DDLFKINAGIVKTLCEGIAKCC-PRAIVNLIS  125 (326)
T ss_dssp             SEEEECCCCCCCSS----CCC---SHHHHHHHHHHHHHHHHHHHHC-TTSEEEECC
T ss_pred             CEEEEcCCcCCCCC----CCH---HHHHHHHHHHHHHHHHHHHhhC-CCeEEEEEC
Confidence            99999999754211    122   2347789888888888887653 234444433

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=98.27  E-value=3.2e-06  Score=68.91  Aligned_cols=97  Identities=16%  Similarity=0.298  Sum_probs=66.6

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCC-HHHHHHHHHHHHHHhCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN-GQQRKNLINQTIEKFGK   89 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~~~   89 (226)
                      .|++++|+|++|++|...++.+...|++|+.+++++++++.+. +   .+.+..   .|..+ .+..    +++    +.
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~---~ga~~~---~~~~~~~~~~----~~~----~~  189 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-A---LGAEEA---ATYAEVPERA----KAW----GG  189 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-H---TTCSEE---EEGGGHHHHH----HHT----TS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-h---cCCCEE---EECCcchhHH----HHh----cC
Confidence            5899999999999999999999999999999999988876543 2   243322   36554 3322    222    58


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCC
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG  150 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~  150 (226)
                      +|++|+ +|. . .                         .+.++..++++|+++.++....
T Consensus       190 ~d~vid-~g~-~-~-------------------------~~~~~~~l~~~G~~v~~g~~~~  222 (302)
T 1iz0_A          190 LDLVLE-VRG-K-E-------------------------VEESLGLLAHGGRLVYIGAAEG  222 (302)
T ss_dssp             EEEEEE-CSC-T-T-------------------------HHHHHTTEEEEEEEEEC-----
T ss_pred             ceEEEE-CCH-H-H-------------------------HHHHHHhhccCCEEEEEeCCCC
Confidence            999999 874 1 0                         2445566677889988876543

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=98.26  E-value=1.7e-06  Score=74.71  Aligned_cols=109  Identities=17%  Similarity=0.211  Sum_probs=77.5

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEe--e--------CCCHHHHHHHH
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC--H--------VSNGQQRKNLI   80 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~--D--------v~~~~~v~~~~   80 (226)
                      .|++++|+|++|++|...++.+...|++|+++++++++++.+ +++   |.+..+-..  |        ..+.++.+.+.
T Consensus       228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~-~~l---Ga~~vi~~~~~d~~~~~~~~~~~~~~~~~~~  303 (456)
T 3krt_A          228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEIC-RAM---GAEAIIDRNAEGYRFWKDENTQDPKEWKRFG  303 (456)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHH---TCCEEEETTTTTCCSEEETTEECHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHH-Hhh---CCcEEEecCcCcccccccccccchHHHHHHH
Confidence            589999999999999999999999999999999888776544 333   433322111  1        23456667777


Q ss_pred             HHHHHHhC--CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCC
Q 027248           81 NQTIEKFG--KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG  150 (226)
Q Consensus        81 ~~~~~~~~--~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~  150 (226)
                      +++.+..+  .+|++|.++|. .                          ..+.++..++++|+++.+++..+
T Consensus       304 ~~i~~~t~g~g~Dvvid~~G~-~--------------------------~~~~~~~~l~~~G~iv~~G~~~~  348 (456)
T 3krt_A          304 KRIRELTGGEDIDIVFEHPGR-E--------------------------TFGASVFVTRKGGTITTCASTSG  348 (456)
T ss_dssp             HHHHHHHTSCCEEEEEECSCH-H--------------------------HHHHHHHHEEEEEEEEESCCTTC
T ss_pred             HHHHHHhCCCCCcEEEEcCCc-h--------------------------hHHHHHHHhhCCcEEEEEecCCC
Confidence            88877653  79999999883 1                          12344556677889998887654

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=98.22  E-value=4e-06  Score=70.34  Aligned_cols=100  Identities=18%  Similarity=0.208  Sum_probs=71.2

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      .|++++|+|+ |++|...++.+...|++|+++++++++++.+.+++   +.+.   ..|..+.+.++       +..+.+
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~l---Ga~~---v~~~~~~~~~~-------~~~~~~  252 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNF---GADS---FLVSRDQEQMQ-------AAAGTL  252 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTS---CCSE---EEETTCHHHHH-------HTTTCE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---CCce---EEeccCHHHHH-------HhhCCC
Confidence            6899999996 99999999999999999999999988876554333   4332   23666654332       223589


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCC
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG  150 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~  150 (226)
                      |++|+++|...                          .++.+++.++++|+++.+++...
T Consensus       253 D~vid~~g~~~--------------------------~~~~~~~~l~~~G~iv~~g~~~~  286 (366)
T 1yqd_A          253 DGIIDTVSAVH--------------------------PLLPLFGLLKSHGKLILVGAPEK  286 (366)
T ss_dssp             EEEEECCSSCC--------------------------CSHHHHHHEEEEEEEEECCCCSS
T ss_pred             CEEEECCCcHH--------------------------HHHHHHHHHhcCCEEEEEccCCC
Confidence            99999998532                          02234455667789999887653

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=98.20  E-value=4.3e-06  Score=67.35  Aligned_cols=78  Identities=13%  Similarity=0.167  Sum_probs=58.7

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      .++++|+++|+|+ ||+|++++..|++.|++|++.+|+.++.+.+.+++...+ .+.  ..|+.   ++.       +  
T Consensus       115 ~~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~-~~~--~~~~~---~~~-------~--  178 (272)
T 1p77_A          115 WLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG-NIQ--AVSMD---SIP-------L--  178 (272)
T ss_dssp             CCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS-CEE--EEEGG---GCC-------C--
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccC-CeE--EeeHH---Hhc-------c--
Confidence            3578999999998 799999999999999999999999998888887775432 222  23431   110       1  


Q ss_pred             CCCCEEEEcCCCCC
Q 027248           88 GKIDVVVSNAAANP  101 (226)
Q Consensus        88 ~~id~li~nag~~~  101 (226)
                      +..|+|||+++...
T Consensus       179 ~~~DivIn~t~~~~  192 (272)
T 1p77_A          179 QTYDLVINATSAGL  192 (272)
T ss_dssp             SCCSEEEECCCC--
T ss_pred             CCCCEEEECCCCCC
Confidence            48999999998753

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=98.13  E-value=2e-05  Score=64.67  Aligned_cols=146  Identities=14%  Similarity=0.096  Sum_probs=90.2

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCCC--eEEEEec--CcchHHHHHHHHHhc----CCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248           14 VAIVTASTQGIGFGIAERLGLEGA--SVVVSSR--KQKNVDEAVVKLKAR----GIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g~--~v~~~~r--~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      +++||||+|.+|..++..|+..|.  ++.++++  ++++++....++...    +.++.+...|    +++.       +
T Consensus         2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l~-------~   70 (313)
T 1hye_A            2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES----DENL-------R   70 (313)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTCG-------G
T ss_pred             EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC----cchH-------H
Confidence            489999999999999999998884  5888998  665454433333221    1222222212    0111       1


Q ss_pred             HhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCc--------CCCCCC
Q 027248           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY--------QPQSSM  157 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~--------~~~~~~  157 (226)
                      .+...|++|+.||......    .+.   ...+..|+.++..+.+++..+-  ++.++++|.....        .+.|..
T Consensus        71 al~gaD~Vi~~Ag~~~~~g----~~r---~dl~~~N~~i~~~i~~~i~~~~--~~~vlv~SNPv~~~t~~~~k~~~~p~~  141 (313)
T 1hye_A           71 IIDESDVVIITSGVPRKEG----MSR---MDLAKTNAKIVGKYAKKIAEIC--DTKIFVITNPVDVMTYKALVDSKFERN  141 (313)
T ss_dssp             GGTTCSEEEECCSCCCCTT----CCH---HHHHHHHHHHHHHHHHHHHHHC--CCEEEECSSSHHHHHHHHHHHHCCCTT
T ss_pred             HhCCCCEEEECCCCCCCCC----CcH---HHHHHHHHHHHHHHHHHHHHhC--CeEEEEecCcHHHHHHHHHHhhCcChh
Confidence            2348999999999754211    223   3458899999999999998864  4445554443321        224444


Q ss_pred             chhhH-hHHHHHHHHHHHHHHhC
Q 027248          158 AMYGV-TKTALLGLTKALAAEMA  179 (226)
Q Consensus       158 ~~Y~~-sKaa~~~~~~~la~e~~  179 (226)
                      ..++. +..--..+...++..+.
T Consensus       142 rviG~gt~LD~~r~~~~la~~lg  164 (313)
T 1hye_A          142 QVFGLGTHLDSLRFKVAIAKFFG  164 (313)
T ss_dssp             SEEECTTHHHHHHHHHHHHHHHT
T ss_pred             cEEEeCccHHHHHHHHHHHHHhC
Confidence            55666 55555566666777664

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=98.12  E-value=3.9e-06  Score=68.46  Aligned_cols=78  Identities=15%  Similarity=0.195  Sum_probs=57.4

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|++.+|+.++.+.+.+++......+    .+   .++       +.+..
T Consensus       138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~----~~---~~~-------~~~~~  202 (297)
T 2egg_A          138 TLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAY----FS---LAE-------AETRL  202 (297)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCE----EC---HHH-------HHHTG
T ss_pred             CCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCce----ee---HHH-------HHhhh
Confidence            578999999997 7999999999999998 89999999988877776653211111    11   122       22334


Q ss_pred             CCCCEEEEcCCCCC
Q 027248           88 GKIDVVVSNAAANP  101 (226)
Q Consensus        88 ~~id~li~nag~~~  101 (226)
                      ...|+|||+.+...
T Consensus       203 ~~aDivIn~t~~~~  216 (297)
T 2egg_A          203 AEYDIIINTTSVGM  216 (297)
T ss_dssp             GGCSEEEECSCTTC
T ss_pred             ccCCEEEECCCCCC
Confidence            58999999998653

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=98.09  E-value=1.9e-05  Score=66.39  Aligned_cols=99  Identities=14%  Similarity=0.172  Sum_probs=66.8

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      .|++++|+||+|++|...++.+...|++|+.++ ++++.+.+ +   +.+.+..   .|..+.+..+    ++.+ .+.+
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~-~---~lGa~~v---~~~~~~~~~~----~~~~-~~g~  249 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELV-R---KLGADDV---IDYKSGSVEE----QLKS-LKPF  249 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHH-H---HTTCSEE---EETTSSCHHH----HHHT-SCCB
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHH-H---HcCCCEE---EECCchHHHH----HHhh-cCCC
Confidence            589999999999999999999889999998888 44554332 2   3344432   3665543322    2222 3579


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEec
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISS  147 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS  147 (226)
                      |++|+++|...                         ...+..+..++++|+++.+++
T Consensus       250 D~vid~~g~~~-------------------------~~~~~~~~~l~~~G~iv~~g~  281 (375)
T 2vn8_A          250 DFILDNVGGST-------------------------ETWAPDFLKKWSGATYVTLVT  281 (375)
T ss_dssp             SEEEESSCTTH-------------------------HHHGGGGBCSSSCCEEEESCC
T ss_pred             CEEEECCCChh-------------------------hhhHHHHHhhcCCcEEEEeCC
Confidence            99999998421                         112344556677889988764

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.08  E-value=2.1e-05  Score=57.51  Aligned_cols=77  Identities=12%  Similarity=0.102  Sum_probs=56.5

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCc-chHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ-KNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      .+.++|+|+ |.+|+.+++.|.+.|++|+++++++ ++.+...... .  ..+.++..|.++++.+++.      .....
T Consensus         3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~-~--~~~~~i~gd~~~~~~l~~a------~i~~a   72 (153)
T 1id1_A            3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL-G--DNADVIPGDSNDSSVLKKA------GIDRC   72 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH-C--TTCEEEESCTTSHHHHHHH------TTTTC
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh-c--CCCeEEEcCCCCHHHHHHc------ChhhC
Confidence            467888986 9999999999999999999999985 4443433322 1  2366788999998875443      12478


Q ss_pred             CEEEEcCC
Q 027248           91 DVVVSNAA   98 (226)
Q Consensus        91 d~li~nag   98 (226)
                      |.+|...+
T Consensus        73 d~vi~~~~   80 (153)
T 1id1_A           73 RAILALSD   80 (153)
T ss_dssp             SEEEECSS
T ss_pred             CEEEEecC
Confidence            99987665

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.07  E-value=1.3e-05  Score=57.25  Aligned_cols=74  Identities=11%  Similarity=0.225  Sum_probs=54.5

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCE
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~   92 (226)
                      .+++|+|+ |.+|..+++.|.+.|++|++++|+++..+...++.     .+..+..|.++.+.+...      .....|+
T Consensus         5 m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~-----~~~~~~~d~~~~~~l~~~------~~~~~d~   72 (140)
T 1lss_A            5 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI-----DALVINGDCTKIKTLEDA------GIEDADM   72 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-----SSEEEESCTTSHHHHHHT------TTTTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhc-----CcEEEEcCCCCHHHHHHc------CcccCCE
Confidence            56889987 99999999999999999999999887655443221     234567788887654321      1347899


Q ss_pred             EEEcCC
Q 027248           93 VVSNAA   98 (226)
Q Consensus        93 li~nag   98 (226)
                      +|.+.+
T Consensus        73 vi~~~~   78 (140)
T 1lss_A           73 YIAVTG   78 (140)
T ss_dssp             EEECCS
T ss_pred             EEEeeC
Confidence            998864

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.04  E-value=6.8e-06  Score=60.31  Aligned_cols=81  Identities=21%  Similarity=0.184  Sum_probs=56.5

Q ss_pred             cccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus         6 ~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      |..+..+++++|+|+ |.+|..+++.|.+.|++|++++|++++.+.+..   ..+  ...+..|.++.+.++..      
T Consensus        13 ~~~~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~---~~g--~~~~~~d~~~~~~l~~~------   80 (155)
T 2g1u_A           13 MSKKQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS---EFS--GFTVVGDAAEFETLKEC------   80 (155)
T ss_dssp             ----CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT---TCC--SEEEESCTTSHHHHHTT------
T ss_pred             hhcccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh---cCC--CcEEEecCCCHHHHHHc------
Confidence            455677899999996 999999999999999999999999877543221   112  34566788776543321      


Q ss_pred             HhCCCCEEEEcCC
Q 027248           86 KFGKIDVVVSNAA   98 (226)
Q Consensus        86 ~~~~id~li~nag   98 (226)
                      .....|++|.+.+
T Consensus        81 ~~~~ad~Vi~~~~   93 (155)
T 2g1u_A           81 GMEKADMVFAFTN   93 (155)
T ss_dssp             TGGGCSEEEECSS
T ss_pred             CcccCCEEEEEeC
Confidence            1236899998776

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=98.04  E-value=1.4e-05  Score=66.51  Aligned_cols=102  Identities=19%  Similarity=0.264  Sum_probs=71.0

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh--
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF--   87 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--   87 (226)
                      .|++++|+|+ |++|...++.+...|+ +|+.+++++++++.+. ++   +.+..   .|..+++    +.+++.+..  
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~~---Ga~~~---~~~~~~~----~~~~v~~~~~g  234 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK-KV---GADYV---INPFEED----VVKEVMDITDG  234 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHH-HH---TCSEE---ECTTTSC----HHHHHHHHTTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh---CCCEE---ECCCCcC----HHHHHHHHcCC
Confidence            7899999999 9999999999999999 8999999987665443 33   33322   3555433    223333332  


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCC
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG  150 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~  150 (226)
                      ..+|++|+++|..                          ...+.+++.++++|+++.+++...
T Consensus       235 ~g~D~vid~~g~~--------------------------~~~~~~~~~l~~~G~iv~~g~~~~  271 (348)
T 2d8a_A          235 NGVDVFLEFSGAP--------------------------KALEQGLQAVTPAGRVSLLGLYPG  271 (348)
T ss_dssp             SCEEEEEECSCCH--------------------------HHHHHHHHHEEEEEEEEECCCCSS
T ss_pred             CCCCEEEECCCCH--------------------------HHHHHHHHHHhcCCEEEEEccCCC
Confidence            2699999999841                          123455666677889999887653

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=98.03  E-value=7.9e-06  Score=67.88  Aligned_cols=100  Identities=13%  Similarity=0.177  Sum_probs=66.9

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      .|++++|+||+|++|...++.+...|++|+++ +++++++.+ +++   +.+.    +| .+.+..+.+ .+.. ....+
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~-~~l---Ga~~----i~-~~~~~~~~~-~~~~-~~~g~  217 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYV-RDL---GATP----ID-ASREPEDYA-AEHT-AGQGF  217 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHH-HHH---TSEE----EE-TTSCHHHHH-HHHH-TTSCE
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHH-HHc---CCCE----ec-cCCCHHHHH-HHHh-cCCCc
Confidence            58999999999999999999999999999988 777665433 333   4332    35 333322222 2211 12379


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccC
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~  149 (226)
                      |++|+++|..                           ..+.++..++++|+++.++...
T Consensus       218 D~vid~~g~~---------------------------~~~~~~~~l~~~G~iv~~g~~~  249 (343)
T 3gaz_A          218 DLVYDTLGGP---------------------------VLDASFSAVKRFGHVVSCLGWG  249 (343)
T ss_dssp             EEEEESSCTH---------------------------HHHHHHHHEEEEEEEEESCCCS
T ss_pred             eEEEECCCcH---------------------------HHHHHHHHHhcCCeEEEEcccC
Confidence            9999999830                           1334455667788999887654

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=98.03  E-value=2.2e-05  Score=63.47  Aligned_cols=76  Identities=18%  Similarity=0.267  Sum_probs=58.6

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      .+++||+++|+|+ ||.|++++..|++.|+ +|.+..|+.++.+++.+++...+ .+...  +..+..            
T Consensus       122 ~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~-~~~~~--~~~~l~------------  185 (281)
T 3o8q_A          122 VLLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYG-EVKAQ--AFEQLK------------  185 (281)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGS-CEEEE--EGGGCC------------
T ss_pred             CCccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccC-CeeEe--eHHHhc------------
Confidence            4678999999998 6999999999999996 89999999999988888876543 33332  221110            


Q ss_pred             hCCCCEEEEcCCCC
Q 027248           87 FGKIDVVVSNAAAN  100 (226)
Q Consensus        87 ~~~id~li~nag~~  100 (226)
                       ...|+|||+....
T Consensus       186 -~~aDiIInaTp~g  198 (281)
T 3o8q_A          186 -QSYDVIINSTSAS  198 (281)
T ss_dssp             -SCEEEEEECSCCC
T ss_pred             -CCCCEEEEcCcCC
Confidence             3789999987654

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=98.01  E-value=5.4e-05  Score=61.85  Aligned_cols=111  Identities=14%  Similarity=0.022  Sum_probs=72.9

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCCC--eEEEEec--CcchHHHHHHHHHhc---CCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248           14 VAIVTASTQGIGFGIAERLGLEGA--SVVVSSR--KQKNVDEAVVKLKAR---GIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g~--~v~~~~r--~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      +++||||+|.+|..++..|+..|.  +++++++  ++++++....++...   ..++.+.. +  +.+           .
T Consensus         2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~~~-----------a   67 (303)
T 1o6z_A            2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--GYE-----------D   67 (303)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--CGG-----------G
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--CHH-----------H
Confidence            489999999999999999998885  6889999  776655444444332   22333322 2  211           1


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEe
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~s  146 (226)
                      +...|++|+.||.....    ..+.+   ..+..|+.+...+.+.+..+ ..++.|+++|
T Consensus        68 ~~~aDvVi~~ag~~~~~----g~~r~---dl~~~N~~i~~~i~~~i~~~-~p~~~viv~S  119 (303)
T 1o6z_A           68 TAGSDVVVITAGIPRQP----GQTRI---DLAGDNAPIMEDIQSSLDEH-NDDYISLTTS  119 (303)
T ss_dssp             GTTCSEEEECCCCCCCT----TCCHH---HHHHHHHHHHHHHHHHHHTT-CSCCEEEECC
T ss_pred             hCCCCEEEEcCCCCCCC----CCCHH---HHHHHHHHHHHHHHHHHHHH-CCCcEEEEeC
Confidence            34899999999975421    12333   34788999888888888765 2334455443

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.98  E-value=9.2e-05  Score=61.79  Aligned_cols=105  Identities=15%  Similarity=0.151  Sum_probs=72.7

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCe-EEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh--
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF--   87 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--   87 (226)
                      .|++++|+|+ |++|...++.....|++ |+.+++++++++.+. ++   ...+.....|-.+.++   +.+++.+..  
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l---~~~~~~~~~~~~~~~~---~~~~v~~~t~g  250 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAK-EI---CPEVVTHKVERLSAEE---SAKKIVESFGG  250 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHH-HH---CTTCEEEECCSCCHHH---HHHHHHHHTSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh---chhcccccccccchHH---HHHHHHHHhCC
Confidence            5889999998 99999999888889998 999999988776544 33   2234334445444444   344444443  


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccC
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~  149 (226)
                      ..+|++|.+.|..                          ...+.++..++++|+++.++...
T Consensus       251 ~g~Dvvid~~g~~--------------------------~~~~~~~~~l~~~G~iv~~G~~~  286 (363)
T 3m6i_A          251 IEPAVALECTGVE--------------------------SSIAAAIWAVKFGGKVFVIGVGK  286 (363)
T ss_dssp             CCCSEEEECSCCH--------------------------HHHHHHHHHSCTTCEEEECCCCC
T ss_pred             CCCCEEEECCCCh--------------------------HHHHHHHHHhcCCCEEEEEccCC
Confidence            3799999998841                          01344556677789999887644

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.94  E-value=1.8e-05  Score=63.64  Aligned_cols=75  Identities=13%  Similarity=0.138  Sum_probs=57.2

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      .+++||+++|+|+ ||.|++++..|++.|+ +|.+++|+.++.+++.+++..  ..+...  +..+.+          + 
T Consensus       116 ~~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~--~~~~~~--~~~~l~----------~-  179 (272)
T 3pwz_A          116 EPLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH--SRLRIS--RYEALE----------G-  179 (272)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC--TTEEEE--CSGGGT----------T-
T ss_pred             CCccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc--CCeeEe--eHHHhc----------c-
Confidence            4678999999998 6999999999999996 899999999998888887754  233332  222111          0 


Q ss_pred             hCCCCEEEEcCCC
Q 027248           87 FGKIDVVVSNAAA   99 (226)
Q Consensus        87 ~~~id~li~nag~   99 (226)
                       ...|+|||+...
T Consensus       180 -~~~DivInaTp~  191 (272)
T 3pwz_A          180 -QSFDIVVNATSA  191 (272)
T ss_dssp             -CCCSEEEECSSG
T ss_pred             -cCCCEEEECCCC
Confidence             378999998764

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=97.94  E-value=2.8e-05  Score=64.96  Aligned_cols=108  Identities=16%  Similarity=0.152  Sum_probs=67.7

Q ss_pred             CC-CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH---
Q 027248           11 QG-KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK---   86 (226)
Q Consensus        11 ~g-k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~---   86 (226)
                      .| ++++|+||+|++|...++.....|++++.++++.+++++..+.+.+.|.+..+   |..+. ..+++.+++.+.   
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi---~~~~~-~~~~~~~~i~~~t~~  241 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVI---TEDQN-NSREFGPTIKEWIKQ  241 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEE---EHHHH-HCGGGHHHHHHHHHH
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEEE---ecCcc-chHHHHHHHHHHhhc
Confidence            47 99999999999999998888888999999988776633322233333444322   32210 001233333332   


Q ss_pred             -hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccC
Q 027248           87 -FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (226)
Q Consensus        87 -~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~  149 (226)
                       .+.+|++|.+.|...                          .. .++..++++|+++.++...
T Consensus       242 ~~~g~Dvvid~~G~~~--------------------------~~-~~~~~l~~~G~~v~~g~~~  278 (364)
T 1gu7_A          242 SGGEAKLALNCVGGKS--------------------------ST-GIARKLNNNGLMLTYGGMS  278 (364)
T ss_dssp             HTCCEEEEEESSCHHH--------------------------HH-HHHHTSCTTCEEEECCCCS
T ss_pred             cCCCceEEEECCCchh--------------------------HH-HHHHHhccCCEEEEecCCC
Confidence             247999999988310                          01 2345567789999887644

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.92  E-value=2.4e-05  Score=64.37  Aligned_cols=98  Identities=17%  Similarity=0.161  Sum_probs=64.2

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCEE
Q 027248           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVV   93 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~l   93 (226)
                      +++|+|++|++|...++.+...|++|+.+++++++++.+. +   .+.+..   .|..+.+  .+.+.++  ..+.+|++
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~-~---lGa~~~---i~~~~~~--~~~~~~~--~~~~~d~v  220 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-V---LGAKEV---LAREDVM--AERIRPL--DKQRWAAA  220 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-H---TTCSEE---EECC-----------C--CSCCEEEE
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-H---cCCcEE---EecCCcH--HHHHHHh--cCCcccEE
Confidence            7999999999999999999899999999999988876553 2   343332   3554432  1222222  12479999


Q ss_pred             EEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccC
Q 027248           94 VSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (226)
Q Consensus        94 i~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~  149 (226)
                      |+++|...                           .+.++..++++|+++.++...
T Consensus       221 id~~g~~~---------------------------~~~~~~~l~~~G~~v~~G~~~  249 (328)
T 1xa0_A          221 VDPVGGRT---------------------------LATVLSRMRYGGAVAVSGLTG  249 (328)
T ss_dssp             EECSTTTT---------------------------HHHHHHTEEEEEEEEECSCCS
T ss_pred             EECCcHHH---------------------------HHHHHHhhccCCEEEEEeecC
Confidence            99998411                           233445566778898887654

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.92  E-value=7.6e-05  Score=62.05  Aligned_cols=104  Identities=16%  Similarity=0.187  Sum_probs=68.2

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCC-HHHHHHHHHHHHH-HhC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN-GQQRKNLINQTIE-KFG   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~-~~~   88 (226)
                      .|++++|+|+ |++|...++.+...|++|+++++++++++.+.    +.+.+..   .|.++ .+..+.+.+...+ ..+
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~----~lGa~~~---~~~~~~~~~~~~i~~~~~~~~g~  239 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK----NCGADVT---LVVDPAKEEESSIIERIRSAIGD  239 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH----HTTCSEE---EECCTTTSCHHHHHHHHHHHSSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH----HhCCCEE---EcCcccccHHHHHHHHhccccCC
Confidence            5899999997 89999999988889999999999887765442    2344422   35553 3322222221110 013


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEecc
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~  148 (226)
                      .+|++|+++|...                          ..+.++..++++|+++.++..
T Consensus       240 g~D~vid~~g~~~--------------------------~~~~~~~~l~~~G~iv~~G~~  273 (352)
T 1e3j_A          240 LPNVTIDCSGNEK--------------------------CITIGINITRTGGTLMLVGMG  273 (352)
T ss_dssp             CCSEEEECSCCHH--------------------------HHHHHHHHSCTTCEEEECSCC
T ss_pred             CCCEEEECCCCHH--------------------------HHHHHHHHHhcCCEEEEEecC
Confidence            7999999998410                          134455666778999988753

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.92  E-value=4.7e-05  Score=63.68  Aligned_cols=101  Identities=18%  Similarity=0.244  Sum_probs=69.5

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh--C
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF--G   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--~   88 (226)
                      .|++++|+| +|++|...++.+...|++|+++++++++++.+ +++   +.+..   .| .+.+++   .+++.+..  .
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~l---Ga~~v---i~-~~~~~~---~~~v~~~~~g~  256 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRA-FAL---GADHG---IN-RLEEDW---VERVYALTGDR  256 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH---TCSEE---EE-TTTSCH---HHHHHHHHTTC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHH-HHc---CCCEE---Ec-CCcccH---HHHHHHHhCCC
Confidence            589999999 89999999999989999999999998776653 333   43332   25 443332   22333322  2


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCC
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG  150 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~  150 (226)
                      .+|++|+++|...                           .+.++..++++|+++.++...+
T Consensus       257 g~D~vid~~g~~~---------------------------~~~~~~~l~~~G~iv~~G~~~~  291 (363)
T 3uog_A          257 GADHILEIAGGAG---------------------------LGQSLKAVAPDGRISVIGVLEG  291 (363)
T ss_dssp             CEEEEEEETTSSC---------------------------HHHHHHHEEEEEEEEEECCCSS
T ss_pred             CceEEEECCChHH---------------------------HHHHHHHhhcCCEEEEEecCCC
Confidence            7999999998311                           2344556677899999987654

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.88  E-value=4.3e-05  Score=63.42  Aligned_cols=100  Identities=14%  Similarity=0.263  Sum_probs=69.4

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh-CC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF-GK   89 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-~~   89 (226)
                      .|++++|+||+|++|...++.+...|++|+.+++++++++.+.+ +   +.+..   .|..+  +   +.+++.+.. +.
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-l---Ga~~v---i~~~~--~---~~~~~~~~~~~g  217 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK-M---GADIV---LNHKE--S---LLNQFKTQGIEL  217 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH-H---TCSEE---ECTTS--C---HHHHHHHHTCCC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c---CCcEE---EECCc--c---HHHHHHHhCCCC
Confidence            68999999999999999999999999999999998877655443 3   43322   24433  1   233333333 47


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEecc
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~  148 (226)
                      +|++++++|..                          ...+.++..++++|++|.+++.
T Consensus       218 ~Dvv~d~~g~~--------------------------~~~~~~~~~l~~~G~iv~~~~~  250 (346)
T 3fbg_A          218 VDYVFCTFNTD--------------------------MYYDDMIQLVKPRGHIATIVAF  250 (346)
T ss_dssp             EEEEEESSCHH--------------------------HHHHHHHHHEEEEEEEEESSCC
T ss_pred             ccEEEECCCch--------------------------HHHHHHHHHhccCCEEEEECCC
Confidence            99999998741                          1124455566778899877653

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=97.88  E-value=0.00011  Score=60.75  Aligned_cols=101  Identities=15%  Similarity=0.215  Sum_probs=70.6

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      .|++++|+|+ |++|...++.+...|++|+.+++++++++.+    .+.+.+..   .|..+.+..+    .+.+..+.+
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~----~~lGa~~~---i~~~~~~~~~----~~~~~~g~~  233 (340)
T 3s2e_A          166 PGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLA----RRLGAEVA---VNARDTDPAA----WLQKEIGGA  233 (340)
T ss_dssp             TTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHH----HHTTCSEE---EETTTSCHHH----HHHHHHSSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH----HHcCCCEE---EeCCCcCHHH----HHHHhCCCC
Confidence            5899999997 8999999998888999999999998776543    22344432   3655544333    333344689


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccC
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~  149 (226)
                      |++|.++|..           +               ..+.++..++++|+++.++...
T Consensus       234 d~vid~~g~~-----------~---------------~~~~~~~~l~~~G~iv~~G~~~  266 (340)
T 3s2e_A          234 HGVLVTAVSP-----------K---------------AFSQAIGMVRRGGTIALNGLPP  266 (340)
T ss_dssp             EEEEESSCCH-----------H---------------HHHHHHHHEEEEEEEEECSCCS
T ss_pred             CEEEEeCCCH-----------H---------------HHHHHHHHhccCCEEEEeCCCC
Confidence            9999998731           1               1344556667788999887654

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.87  E-value=4.2e-05  Score=64.08  Aligned_cols=75  Identities=15%  Similarity=0.213  Sum_probs=56.3

Q ss_pred             ccCCC--EEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            9 RFQGK--VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         9 ~~~gk--~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      +++||  +|+|.|| |++|+.+++.|++ .++|.+.+|+.++++...       ..+..+.+|+.|.++++++++     
T Consensus        11 ~~~g~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~-------~~~~~~~~d~~d~~~l~~~~~-----   76 (365)
T 3abi_A           11 HIEGRHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVK-------EFATPLKVDASNFDKLVEVMK-----   76 (365)
T ss_dssp             -----CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHT-------TTSEEEECCTTCHHHHHHHHT-----
T ss_pred             cccCCccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHh-------ccCCcEEEecCCHHHHHHHHh-----
Confidence            34455  5889998 9999999999875 578999999987765542       234567889999998877765     


Q ss_pred             hCCCCEEEEcCCC
Q 027248           87 FGKIDVVVSNAAA   99 (226)
Q Consensus        87 ~~~id~li~nag~   99 (226)
                        ..|+||++++.
T Consensus        77 --~~DvVi~~~p~   87 (365)
T 3abi_A           77 --EFELVIGALPG   87 (365)
T ss_dssp             --TCSEEEECCCG
T ss_pred             --CCCEEEEecCC
Confidence              78999998875

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.86  E-value=8.2e-05  Score=62.39  Aligned_cols=74  Identities=22%  Similarity=0.267  Sum_probs=55.0

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      .|++++|+|+ |++|...++.+...|++|+.+++++++++.+. ++   +.+..   .|..+.+.+++    +.   +.+
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~-~l---Ga~~v---i~~~~~~~~~~----~~---~g~  258 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK-AL---GADEV---VNSRNADEMAA----HL---KSF  258 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HH---TCSEE---EETTCHHHHHT----TT---TCE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc---CCcEE---eccccHHHHHH----hh---cCC
Confidence            5889999997 89999999988889999999999998876554 33   33322   36666543322    21   589


Q ss_pred             CEEEEcCCC
Q 027248           91 DVVVSNAAA   99 (226)
Q Consensus        91 d~li~nag~   99 (226)
                      |++|+++|.
T Consensus       259 Dvvid~~g~  267 (369)
T 1uuf_A          259 DFILNTVAA  267 (369)
T ss_dssp             EEEEECCSS
T ss_pred             CEEEECCCC
Confidence            999999985

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.86  E-value=7.7e-05  Score=59.19  Aligned_cols=81  Identities=15%  Similarity=0.218  Sum_probs=59.5

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCc-------------------chHHHHHHHHHhcCCc--EEEE
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQ-------------------KNVDEAVVKLKARGIE--VIGV   66 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~~~~~~~~--~~~~   66 (226)
                      .+++++|+|.|+ ||+|.++++.|++.|. ++.+++++.                   .+.+.+.+.+.+..+.  +..+
T Consensus        28 ~l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~  106 (249)
T 1jw9_B           28 ALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPV  106 (249)
T ss_dssp             HHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEE
Confidence            356789999986 7999999999999997 799999997                   7788887877765544  4444


Q ss_pred             EeeCCCHHHHHHHHHHHHHHhCCCCEEEEcCC
Q 027248           67 VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAA   98 (226)
Q Consensus        67 ~~Dv~~~~~v~~~~~~~~~~~~~id~li~nag   98 (226)
                      ..+++ ++.+++++       ...|++|.+..
T Consensus       107 ~~~~~-~~~~~~~~-------~~~DvVi~~~d  130 (249)
T 1jw9_B          107 NALLD-DAELAALI-------AEHDLVLDCTD  130 (249)
T ss_dssp             CSCCC-HHHHHHHH-------HTSSEEEECCS
T ss_pred             eccCC-HhHHHHHH-------hCCCEEEEeCC
Confidence            44454 33333333       27899997754

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.85  E-value=4.4e-05  Score=62.40  Aligned_cols=92  Identities=16%  Similarity=0.118  Sum_probs=63.2

Q ss_pred             ccCCCE-EEEEcCCC-----------------c-hhHHHHHHHHhCCCeEEEEecCcchHHHH---------HHHHHh--
Q 027248            9 RFQGKV-AIVTASTQ-----------------G-IGFGIAERLGLEGASVVVSSRKQKNVDEA---------VVKLKA--   58 (226)
Q Consensus         9 ~~~gk~-vlItGa~~-----------------g-iG~a~~~~l~~~g~~v~~~~r~~~~~~~~---------~~~~~~--   58 (226)
                      ++.||+ ||||+|+.                 | .|.++|++++++|+.|+++.+... +...         .+.+..  
T Consensus        33 ~l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~s-l~p~~r~~~~~~~~~~~~~~~  111 (313)
T 1p9o_A           33 GAQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARS-AFPYAHRFPPQTWLSALRPSG  111 (313)
T ss_dssp             HHTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTS-CCTTGGGSCHHHHHHHCEECC
T ss_pred             hhcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCC-cCcchhccCccchhhhhcccc
Confidence            578888 99998865                 5 999999999999999999988532 1110         111100  


Q ss_pred             -cCCcEEEEEeeCCCHHHHHHHHHHHH------------------------------HHhCCCCEEEEcCCCCC
Q 027248           59 -RGIEVIGVVCHVSNGQQRKNLINQTI------------------------------EKFGKIDVVVSNAAANP  101 (226)
Q Consensus        59 -~~~~~~~~~~Dv~~~~~v~~~~~~~~------------------------------~~~~~id~li~nag~~~  101 (226)
                       ....+..+..|+...+++.+.+.+..                              +.++..|++|.+|++..
T Consensus       112 ~~~~~~~~i~v~v~sa~~m~~av~~~~~~~~~~~l~~i~f~tv~eyl~~L~~~~~~l~~~~~~di~i~aAAVsD  185 (313)
T 1p9o_A          112 PALSGLLSLEAEENALPGFAEALRSYQEAAAAGTFLVVEFTTLADYLHLLQAAAQALNPLGPSAMFYLAAAVSD  185 (313)
T ss_dssp             C-CCSEEEEEEETTTSTTHHHHHHHHHHHHHHTCEEEEEECBHHHHHHHHHHHHHHHGGGGGGEEEEECSBCCS
T ss_pred             ccccccceeeeccccHHHHHHHHHHHhhhhccccceeeccccHHHHHHHHHHhhHHhhccCCCCEEEECCchhh
Confidence             11224456678877777766665442                              33578999999999875

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.85  E-value=1.1e-05  Score=58.42  Aligned_cols=71  Identities=18%  Similarity=0.248  Sum_probs=53.1

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id   91 (226)
                      +++++|.|+ |++|+.+++.|.+.|++|.+.+|++++.+.+.+++.   ..  .  .+..+.+   ++++       ..|
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~---~~--~--~~~~~~~---~~~~-------~~D   82 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYE---YE--Y--VLINDID---SLIK-------NND   82 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHT---CE--E--EECSCHH---HHHH-------TCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhC---Cc--e--EeecCHH---HHhc-------CCC
Confidence            899999996 999999999999999999999999988877666653   11  1  1233322   2222       789


Q ss_pred             EEEEcCCCC
Q 027248           92 VVVSNAAAN  100 (226)
Q Consensus        92 ~li~nag~~  100 (226)
                      ++|++.+..
T Consensus        83 ivi~at~~~   91 (144)
T 3oj0_A           83 VIITATSSK   91 (144)
T ss_dssp             EEEECSCCS
T ss_pred             EEEEeCCCC
Confidence            999888753

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=97.83  E-value=0.00013  Score=61.18  Aligned_cols=103  Identities=14%  Similarity=0.193  Sum_probs=69.6

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCC-HHHHHHHHHHHHHHhC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN-GQQRKNLINQTIEKFG   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~~   88 (226)
                      .|++++|+|+ |++|...++.+...|+ +|+.+++++++++.+. +   .+.+..   .|..+ .+++.+.+.++.  .+
T Consensus       192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~---lGa~~v---i~~~~~~~~~~~~~~~~~--~~  261 (374)
T 1cdo_A          192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-V---FGATDF---VNPNDHSEPISQVLSKMT--NG  261 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-H---TTCCEE---ECGGGCSSCHHHHHHHHH--TS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-H---hCCceE---EeccccchhHHHHHHHHh--CC
Confidence            5889999995 9999999998888999 7999999988876543 2   243322   35443 122333333322  24


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcC-CEEEEEeccC
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKG-SSVVLISSIA  149 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~-~~iv~~sS~~  149 (226)
                      .+|++|+++|..                          ...+.++..++++ |+++.++...
T Consensus       262 g~D~vid~~g~~--------------------------~~~~~~~~~l~~~~G~iv~~G~~~  297 (374)
T 1cdo_A          262 GVDFSLECVGNV--------------------------GVMRNALESCLKGWGVSVLVGWTD  297 (374)
T ss_dssp             CBSEEEECSCCH--------------------------HHHHHHHHTBCTTTCEEEECSCCS
T ss_pred             CCCEEEECCCCH--------------------------HHHHHHHHHhhcCCcEEEEEcCCC
Confidence            799999999841                          1134555666778 9999887654

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.83  E-value=2.4e-05  Score=64.93  Aligned_cols=100  Identities=14%  Similarity=0.180  Sum_probs=67.5

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      .|++++|+|+ |++|...++.+...|+ +|+.+++++++++.+.+ +    .+.   ..|..+++ +.+.+.++.  .+.
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~-l----a~~---v~~~~~~~-~~~~~~~~~--~~g  231 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARP-Y----ADR---LVNPLEED-LLEVVRRVT--GSG  231 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTT-T----CSE---EECTTTSC-HHHHHHHHH--SSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h----HHh---ccCcCccC-HHHHHHHhc--CCC
Confidence            7899999999 9999999998888999 89999998876543322 1    111   23555433 222222222  347


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEecc
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~  148 (226)
                      +|++|+++|..                          ...+.++..++++|+++.+++.
T Consensus       232 ~D~vid~~g~~--------------------------~~~~~~~~~l~~~G~iv~~g~~  264 (343)
T 2dq4_A          232 VEVLLEFSGNE--------------------------AAIHQGLMALIPGGEARILGIP  264 (343)
T ss_dssp             EEEEEECSCCH--------------------------HHHHHHHHHEEEEEEEEECCCC
T ss_pred             CCEEEECCCCH--------------------------HHHHHHHHHHhcCCEEEEEecC
Confidence            99999999841                          1134455666778899988764

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=97.82  E-value=3.3e-05  Score=64.51  Aligned_cols=101  Identities=21%  Similarity=0.195  Sum_probs=68.4

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCH-HHHHHHHHHHHHHhCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNG-QQRKNLINQTIEKFGK   89 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~~~   89 (226)
                      .|++++|+|+ |++|...++.+...|++|+.+++++++++.+. ++   +.+..   .|..+. +.    .+++.   +.
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~-~l---Ga~~v---~~~~~~~~~----~~~~~---~~  243 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM-KM---GADHY---IATLEEGDW----GEKYF---DT  243 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HH---TCSEE---EEGGGTSCH----HHHSC---SC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-Hc---CCCEE---EcCcCchHH----HHHhh---cC
Confidence            5899999999 99999999988889999999999998876554 33   33322   254443 22    22222   58


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCC
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG  150 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~  150 (226)
                      +|++|.++|...  .                      ...+.++..++++|+++.++....
T Consensus       244 ~D~vid~~g~~~--~----------------------~~~~~~~~~l~~~G~iv~~g~~~~  280 (360)
T 1piw_A          244 FDLIVVCASSLT--D----------------------IDFNIMPKAMKVGGRIVSISIPEQ  280 (360)
T ss_dssp             EEEEEECCSCST--T----------------------CCTTTGGGGEEEEEEEEECCCCCS
T ss_pred             CCEEEECCCCCc--H----------------------HHHHHHHHHhcCCCEEEEecCCCC
Confidence            999999998620  0                      002234455666788888876543

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=97.75  E-value=6.1e-05  Score=62.80  Aligned_cols=99  Identities=20%  Similarity=0.218  Sum_probs=67.6

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      .|++++|+|+ |++|...++.+...|++|+.+++++++++.+.+++   +.+..   .|..+.+.++       +..+.+
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~l---Ga~~v---i~~~~~~~~~-------~~~~g~  245 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDL---GADDY---VIGSDQAKMS-------ELADSL  245 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTS---CCSCE---EETTCHHHHH-------HSTTTE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHc---CCcee---eccccHHHHH-------HhcCCC
Confidence            6899999995 99999999988889999999999988765544232   43322   2555543322       223579


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccC
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~  149 (226)
                      |++|.++|....                          .+.++..++++|+++.++...
T Consensus       246 D~vid~~g~~~~--------------------------~~~~~~~l~~~G~iv~~G~~~  278 (357)
T 2cf5_A          246 DYVIDTVPVHHA--------------------------LEPYLSLLKLDGKLILMGVIN  278 (357)
T ss_dssp             EEEEECCCSCCC--------------------------SHHHHTTEEEEEEEEECSCCS
T ss_pred             CEEEECCCChHH--------------------------HHHHHHHhccCCEEEEeCCCC
Confidence            999999985320                          123344556678888887654

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.73  E-value=0.00013  Score=52.41  Aligned_cols=73  Identities=18%  Similarity=0.169  Sum_probs=56.1

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCE
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~   92 (226)
                      ++++|.|+ |.+|..+++.|.+.|++|+++++++++.+...+    .  .+.++..|.++++.++++      .....|.
T Consensus         8 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~----~--g~~~i~gd~~~~~~l~~a------~i~~ad~   74 (140)
T 3fwz_A            8 NHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE----R--GVRAVLGNAANEEIMQLA------HLECAKW   74 (140)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----T--TCEEEESCTTSHHHHHHT------TGGGCSE
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----c--CCCEEECCCCCHHHHHhc------CcccCCE
Confidence            56788886 889999999999999999999999987665432    2  345678899999865543      1237888


Q ss_pred             EEEcCC
Q 027248           93 VVSNAA   98 (226)
Q Consensus        93 li~nag   98 (226)
                      +|...+
T Consensus        75 vi~~~~   80 (140)
T 3fwz_A           75 LILTIP   80 (140)
T ss_dssp             EEECCS
T ss_pred             EEEECC
Confidence            886655

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=97.73  E-value=0.00023  Score=59.59  Aligned_cols=103  Identities=16%  Similarity=0.237  Sum_probs=68.4

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCC-HHHHHHHHHHHHHHhC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN-GQQRKNLINQTIEKFG   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~~   88 (226)
                      .|++++|+|+ |++|...++.+...|+ +|+.+++++++++.+. ++   +.+..   .|..+ .+++.+.+.++.  .+
T Consensus       190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~-~l---Ga~~v---i~~~~~~~~~~~~v~~~~--~~  259 (373)
T 2fzw_A          190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK-EF---GATEC---INPQDFSKPIQEVLIEMT--DG  259 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HH---TCSEE---ECGGGCSSCHHHHHHHHT--TS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hc---CCceE---eccccccccHHHHHHHHh--CC
Confidence            5889999996 9999999988888999 7999999988876543 33   33322   25443 122222222221  24


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcC-CEEEEEeccC
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKG-SSVVLISSIA  149 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~-~~iv~~sS~~  149 (226)
                      .+|++|+++|..                          ...+.++..++++ |+++.++...
T Consensus       260 g~D~vid~~g~~--------------------------~~~~~~~~~l~~~~G~iv~~G~~~  295 (373)
T 2fzw_A          260 GVDYSFECIGNV--------------------------KVMRAALEACHKGWGVSVVVGVAA  295 (373)
T ss_dssp             CBSEEEECSCCH--------------------------HHHHHHHHTBCTTTCEEEECSCCC
T ss_pred             CCCEEEECCCcH--------------------------HHHHHHHHhhccCCcEEEEEecCC
Confidence            799999999841                          1134455666778 9999887554

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=97.73  E-value=0.00028  Score=59.10  Aligned_cols=101  Identities=16%  Similarity=0.211  Sum_probs=67.3

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCC-HHHHHHHHHHHHHHhC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN-GQQRKNLINQTIEKFG   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~~   88 (226)
                      .|++++|+|+ |++|...++.+...|+ +|+.+++++++++.+. ++   +.+..   .|..+ .+++.+.+.++.  .+
T Consensus       195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l---Ga~~v---i~~~~~~~~~~~~v~~~~--~~  264 (376)
T 1e3i_A          195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK-AL---GATDC---LNPRELDKPVQDVITELT--AG  264 (376)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT---TCSEE---ECGGGCSSCHHHHHHHHH--TS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hh---CCcEE---EccccccchHHHHHHHHh--CC
Confidence            5889999995 9999999998888999 7999999988876542 22   43322   25443 122222222221  24


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcC-CEEEEEec
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKG-SSVVLISS  147 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~-~~iv~~sS  147 (226)
                      .+|++|.++|..                          ...+.++..++++ |+++.++.
T Consensus       265 g~Dvvid~~G~~--------------------------~~~~~~~~~l~~~~G~iv~~G~  298 (376)
T 1e3i_A          265 GVDYSLDCAGTA--------------------------QTLKAAVDCTVLGWGSCTVVGA  298 (376)
T ss_dssp             CBSEEEESSCCH--------------------------HHHHHHHHTBCTTTCEEEECCC
T ss_pred             CccEEEECCCCH--------------------------HHHHHHHHHhhcCCCEEEEECC
Confidence            899999999841                          1134455666778 99998876

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=97.72  E-value=0.00011  Score=61.74  Aligned_cols=102  Identities=12%  Similarity=0.149  Sum_probs=69.4

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCC-CeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCC--CHHHHHHHHHHHHHHh
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEG-ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS--NGQQRKNLINQTIEKF   87 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~--~~~~v~~~~~~~~~~~   87 (226)
                      .|++++|+| +|++|...++.+...| ++|+.+++++++++.+. +   .+.+..   .|..  +.++   +.+++.+..
T Consensus       195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~-~---lGa~~v---i~~~~~~~~~---~~~~v~~~~  263 (380)
T 1vj0_A          195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-E---IGADLT---LNRRETSVEE---RRKAIMDIT  263 (380)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-H---TTCSEE---EETTTSCHHH---HHHHHHHHT
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH-H---cCCcEE---EeccccCcch---HHHHHHHHh
Confidence            488999999 8999999999888899 59999999987765543 2   343322   2544  1333   334444433


Q ss_pred             C--CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccC
Q 027248           88 G--KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (226)
Q Consensus        88 ~--~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~  149 (226)
                      +  .+|++|+++|...                          ..+.++..++++|+++.++...
T Consensus       264 ~g~g~Dvvid~~g~~~--------------------------~~~~~~~~l~~~G~iv~~G~~~  301 (380)
T 1vj0_A          264 HGRGADFILEATGDSR--------------------------ALLEGSELLRRGGFYSVAGVAV  301 (380)
T ss_dssp             TTSCEEEEEECSSCTT--------------------------HHHHHHHHEEEEEEEEECCCCS
T ss_pred             CCCCCcEEEECCCCHH--------------------------HHHHHHHHHhcCCEEEEEecCC
Confidence            2  6999999998521                          1234455666788999887654

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=97.72  E-value=8.2e-05  Score=61.75  Aligned_cols=93  Identities=20%  Similarity=0.250  Sum_probs=66.3

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      .|++++|+|+ |++|...++.+...|++|+.+++++++.+.+.    +.+.+..+     ++.+.+++          .+
T Consensus       176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~----~lGa~~v~-----~~~~~~~~----------~~  235 (348)
T 3two_A          176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDAL----SMGVKHFY-----TDPKQCKE----------EL  235 (348)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHH----HTTCSEEE-----SSGGGCCS----------CE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH----hcCCCeec-----CCHHHHhc----------CC
Confidence            5899999997 99999999988889999999999998876443    23444333     33332211          79


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccC
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~  149 (226)
                      |++|.++|...                          ..+.++..++++|+++.++...
T Consensus       236 D~vid~~g~~~--------------------------~~~~~~~~l~~~G~iv~~G~~~  268 (348)
T 3two_A          236 DFIISTIPTHY--------------------------DLKDYLKLLTYNGDLALVGLPP  268 (348)
T ss_dssp             EEEEECCCSCC--------------------------CHHHHHTTEEEEEEEEECCCCC
T ss_pred             CEEEECCCcHH--------------------------HHHHHHHHHhcCCEEEEECCCC
Confidence            99999998531                          1234555666778888886544

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=97.71  E-value=0.0001  Score=61.14  Aligned_cols=101  Identities=18%  Similarity=0.228  Sum_probs=67.9

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhC--CCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLE--GASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      .|++++|+|+ |++|...++.+...  |++|+.+++++++++.+. ++   +.+..   .|..+.   ++.++++.+ ..
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~-~l---Ga~~v---i~~~~~---~~~~~~~~~-g~  237 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFAL-EL---GADYV---SEMKDA---ESLINKLTD-GL  237 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHH-HH---TCSEE---ECHHHH---HHHHHHHHT-TC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHH-Hh---CCCEE---eccccc---hHHHHHhhc-CC
Confidence            7899999999 89999999888888  999999999887765543 33   33322   233320   122333322 22


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccC
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~  149 (226)
                      .+|++|.++|..                          ...+.++..++++|+++.++...
T Consensus       238 g~D~vid~~g~~--------------------------~~~~~~~~~l~~~G~iv~~g~~~  272 (344)
T 2h6e_A          238 GASIAIDLVGTE--------------------------ETTYNLGKLLAQEGAIILVGMEG  272 (344)
T ss_dssp             CEEEEEESSCCH--------------------------HHHHHHHHHEEEEEEEEECCCCS
T ss_pred             CccEEEECCCCh--------------------------HHHHHHHHHhhcCCEEEEeCCCC
Confidence            799999999841                          11344555667788999887654

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=97.71  E-value=0.00061  Score=56.63  Aligned_cols=100  Identities=20%  Similarity=0.257  Sum_probs=66.9

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCC--CHHHHHHHHHHHHHHh
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS--NGQQRKNLINQTIEKF   87 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~--~~~~v~~~~~~~~~~~   87 (226)
                      .|++++|+|+ |++|...++.+...|+ +|+.+++++++++.+. +   .+.+. +  .|..  +.++   +.+++.+..
T Consensus       171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~---lGa~~-v--i~~~~~~~~~---~~~~i~~~~  239 (356)
T 1pl8_A          171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-E---IGADL-V--LQISKESPQE---IARKVEGQL  239 (356)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-H---TTCSE-E--EECSSCCHHH---HHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-H---hCCCE-E--EcCcccccch---HHHHHHHHh
Confidence            5889999996 8999999988888999 8999999887665432 2   34432 2  2554  2222   233333322


Q ss_pred             -CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEec
Q 027248           88 -GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISS  147 (226)
Q Consensus        88 -~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS  147 (226)
                       +.+|++|.++|...                          ..+.++..++++|+++.++.
T Consensus       240 ~~g~D~vid~~g~~~--------------------------~~~~~~~~l~~~G~iv~~G~  274 (356)
T 1pl8_A          240 GCKPEVTIECTGAEA--------------------------SIQAGIYATRSGGTLVLVGL  274 (356)
T ss_dssp             TSCCSEEEECSCCHH--------------------------HHHHHHHHSCTTCEEEECSC
T ss_pred             CCCCCEEEECCCChH--------------------------HHHHHHHHhcCCCEEEEEec
Confidence             47999999998410                          12344556677899998875

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=97.71  E-value=0.00028  Score=59.13  Aligned_cols=103  Identities=14%  Similarity=0.182  Sum_probs=68.2

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCC-HHHHHHHHHHHHHHhC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN-GQQRKNLINQTIEKFG   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~~   88 (226)
                      .|++++|+|+ |++|...++.+...|+ +|+.+++++++++.+. ++   +.+..   .|..+ .+++.+.+.++.  .+
T Consensus       191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~l---Ga~~v---i~~~~~~~~~~~~~~~~~--~~  260 (374)
T 2jhf_A          191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK-EV---GATEC---VNPQDYKKPIQEVLTEMS--NG  260 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT---TCSEE---ECGGGCSSCHHHHHHHHT--TS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hh---CCceE---ecccccchhHHHHHHHHh--CC
Confidence            5889999995 9999999998888999 7999999988876542 22   43322   25443 122222222221  14


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcC-CEEEEEeccC
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKG-SSVVLISSIA  149 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~-~~iv~~sS~~  149 (226)
                      .+|++|+++|..                          ...+.++..++++ |+++.++...
T Consensus       261 g~D~vid~~g~~--------------------------~~~~~~~~~l~~~~G~iv~~G~~~  296 (374)
T 2jhf_A          261 GVDFSFEVIGRL--------------------------DTMVTALSCCQEAYGVSVIVGVPP  296 (374)
T ss_dssp             CBSEEEECSCCH--------------------------HHHHHHHHHBCTTTCEEEECSCCC
T ss_pred             CCcEEEECCCCH--------------------------HHHHHHHHHhhcCCcEEEEeccCC
Confidence            799999999841                          1133455566778 9999887543

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.71  E-value=3.9e-05  Score=57.65  Aligned_cols=78  Identities=10%  Similarity=0.128  Sum_probs=56.8

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhC-CCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLE-GASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      +..+++++|+| .|.+|..+++.|.+. |++|+++++++++.+...    +.+  +.++.+|.++++.++++     ...
T Consensus        36 ~~~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~----~~g--~~~~~gd~~~~~~l~~~-----~~~  103 (183)
T 3c85_A           36 NPGHAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQHR----SEG--RNVISGDATDPDFWERI-----LDT  103 (183)
T ss_dssp             CCTTCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHH----HTT--CCEEECCTTCHHHHHTB-----CSC
T ss_pred             CCCCCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHH----HCC--CCEEEcCCCCHHHHHhc-----cCC
Confidence            45577889998 599999999999999 999999999987665433    333  34566798887654332     012


Q ss_pred             CCCCEEEEcCC
Q 027248           88 GKIDVVVSNAA   98 (226)
Q Consensus        88 ~~id~li~nag   98 (226)
                      ...|++|.+.+
T Consensus       104 ~~ad~vi~~~~  114 (183)
T 3c85_A          104 GHVKLVLLAMP  114 (183)
T ss_dssp             CCCCEEEECCS
T ss_pred             CCCCEEEEeCC
Confidence            47899997665

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=97.69  E-value=0.00011  Score=61.41  Aligned_cols=100  Identities=12%  Similarity=0.149  Sum_probs=67.2

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHh-CCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH-hC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGL-EGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK-FG   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~-~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~~   88 (226)
                      .|++++|+||+|++|...++.+.. .|++|+.+++++++++.+.    +.+.+..   .|..+  +   +.+++.+. .+
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~----~lGad~v---i~~~~--~---~~~~v~~~~~~  238 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVK----SLGAHHV---IDHSK--P---LAAEVAALGLG  238 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHH----HTTCSEE---ECTTS--C---HHHHHHTTCSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHH----HcCCCEE---EeCCC--C---HHHHHHHhcCC
Confidence            588999999999999988876665 5899999999887765543    2344432   24443  1   23333332 24


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEecc
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~  148 (226)
                      .+|+++.++|..                          ...+.++..++++|+++.+.+.
T Consensus       239 g~Dvvid~~g~~--------------------------~~~~~~~~~l~~~G~iv~~g~~  272 (363)
T 4dvj_A          239 APAFVFSTTHTD--------------------------KHAAEIADLIAPQGRFCLIDDP  272 (363)
T ss_dssp             CEEEEEECSCHH--------------------------HHHHHHHHHSCTTCEEEECSCC
T ss_pred             CceEEEECCCch--------------------------hhHHHHHHHhcCCCEEEEECCC
Confidence            799999988741                          1234455666778999988543

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=97.66  E-value=0.00065  Score=55.67  Aligned_cols=117  Identities=16%  Similarity=0.131  Sum_probs=72.2

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCC--CeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCC
Q 027248           14 VAIVTASTQGIGFGIAERLGLEG--ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id   91 (226)
                      +|.|+||+|.+|..++..|+..|  .+|+++++++  .+....++.+......+... . ...+.++.       +...|
T Consensus         2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~~~~~l~~~-~-~t~d~~~a-------~~~aD   70 (314)
T 1mld_A            2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIETRATVKGY-L-GPEQLPDC-------LKGCD   70 (314)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSSSCEEEEE-E-SGGGHHHH-------HTTCS
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccCcCceEEEe-c-CCCCHHHH-------hCCCC
Confidence            48899999999999999999988  6799999987  33444444432211111100 0 01112222       34899


Q ss_pred             EEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccC
Q 027248           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (226)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~  149 (226)
                      ++|+.+|.....+    .+..   +.+..|+.....+.+.+..+- .+++++++|-..
T Consensus        71 vVvi~ag~~~~~g----~~r~---dl~~~n~~i~~~i~~~i~~~~-p~a~viv~sNPv  120 (314)
T 1mld_A           71 VVVIPAGVPRKPG----MTRD---DLFNTNATIVATLTAACAQHC-PDAMICIISNPV  120 (314)
T ss_dssp             EEEECCSCCCCTT----CCGG---GGHHHHHHHHHHHHHHHHHHC-TTSEEEECSSCH
T ss_pred             EEEECCCcCCCCC----CcHH---HHHHHHHHHHHHHHHHHHhhC-CCeEEEEECCCc
Confidence            9999999864221    1221   236777777777776666543 457888876543

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=97.64  E-value=7.4e-05  Score=62.64  Aligned_cols=102  Identities=20%  Similarity=0.285  Sum_probs=68.8

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH---H
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE---K   86 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~---~   86 (226)
                      .|++++|+|+ |++|...++.+...|+ +|+.+++++++.+. .+++   |.+..   .|.++.+..    +.+.+   .
T Consensus       182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~-a~~l---Ga~~v---i~~~~~~~~----~~i~~~~~~  249 (370)
T 4ej6_A          182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRL-AEEV---GATAT---VDPSAGDVV----EAIAGPVGL  249 (370)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHH-HHHH---TCSEE---ECTTSSCHH----HHHHSTTSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH-HHHc---CCCEE---ECCCCcCHH----HHHHhhhhc
Confidence            5899999998 8999999988888999 78889888876653 3333   43322   355554332    23332   1


Q ss_pred             -hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCC
Q 027248           87 -FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG  150 (226)
Q Consensus        87 -~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~  150 (226)
                       .+.+|++|.++|..                          ...+.++..++++|+++.++....
T Consensus       250 ~~gg~Dvvid~~G~~--------------------------~~~~~~~~~l~~~G~vv~~G~~~~  288 (370)
T 4ej6_A          250 VPGGVDVVIECAGVA--------------------------ETVKQSTRLAKAGGTVVILGVLPQ  288 (370)
T ss_dssp             STTCEEEEEECSCCH--------------------------HHHHHHHHHEEEEEEEEECSCCCT
T ss_pred             cCCCCCEEEECCCCH--------------------------HHHHHHHHHhccCCEEEEEeccCC
Confidence             24799999998741                          123445566677889998876544

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.63  E-value=8.8e-05  Score=57.39  Aligned_cols=72  Identities=18%  Similarity=0.182  Sum_probs=55.9

Q ss_pred             EEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCEEE
Q 027248           15 AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVV   94 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~li   94 (226)
                      ++|+|+ |.+|..+++.|.+.|++|+++++++++.+...++.     ...++..|.++++.++++      .....|++|
T Consensus         3 iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~-----~~~~i~gd~~~~~~l~~a------~i~~ad~vi   70 (218)
T 3l4b_C            3 VIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL-----KATIIHGDGSHKEILRDA------EVSKNDVVV   70 (218)
T ss_dssp             EEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS-----SSEEEESCTTSHHHHHHH------TCCTTCEEE
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc-----CCeEEEcCCCCHHHHHhc------CcccCCEEE
Confidence            889996 89999999999999999999999988766544322     355788999998876543      124788888


Q ss_pred             EcCC
Q 027248           95 SNAA   98 (226)
Q Consensus        95 ~nag   98 (226)
                      ...+
T Consensus        71 ~~~~   74 (218)
T 3l4b_C           71 ILTP   74 (218)
T ss_dssp             ECCS
T ss_pred             EecC
Confidence            6654

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=97.63  E-value=0.00067  Score=54.65  Aligned_cols=42  Identities=19%  Similarity=0.182  Sum_probs=36.3

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHH
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK   55 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~   55 (226)
                      +++.|.|+ |.+|.+++..|++.|++|++.+|+++.++...+.
T Consensus         5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~   46 (283)
T 4e12_A            5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKR   46 (283)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHH
Confidence            56777875 7899999999999999999999999887776654

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=97.62  E-value=5.9e-05  Score=62.86  Aligned_cols=103  Identities=16%  Similarity=0.231  Sum_probs=64.5

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh---
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF---   87 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~---   87 (226)
                      .|++++|+||+|++|...++.....|++++++.++.++.++..+...+.|.+..+   |..+. .    .+++.+..   
T Consensus       167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi---~~~~~-~----~~~~~~~~~~~  238 (357)
T 1zsy_A          167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVI---TEEEL-R----RPEMKNFFKDM  238 (357)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEE---EHHHH-H----SGGGGGTTSSS
T ss_pred             CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEE---ecCcc-h----HHHHHHHHhCC
Confidence            5899999999999999998888888999888877655433333334444544322   32111 1    11222211   


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEecc
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~  148 (226)
                      +.+|++|.+.|...                           ....+..++++|+++.++..
T Consensus       239 ~~~Dvvid~~g~~~---------------------------~~~~~~~l~~~G~iv~~G~~  272 (357)
T 1zsy_A          239 PQPRLALNCVGGKS---------------------------STELLRQLARGGTMVTYGGM  272 (357)
T ss_dssp             CCCSEEEESSCHHH---------------------------HHHHHTTSCTTCEEEECCCC
T ss_pred             CCceEEEECCCcHH---------------------------HHHHHHhhCCCCEEEEEecC
Confidence            25899999987310                           11234566778999988654

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=97.59  E-value=0.00046  Score=57.77  Aligned_cols=102  Identities=18%  Similarity=0.212  Sum_probs=68.0

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCC-HHHHHHHHHHHHHHh-
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN-GQQRKNLINQTIEKF-   87 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~-   87 (226)
                      .|++++|+|+ |++|...++.+...|+ +|+.+++++++++.+. +   .+.+..   .|..+ .+++   .+++.+.. 
T Consensus       191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~---lGa~~v---i~~~~~~~~~---~~~i~~~t~  259 (373)
T 1p0f_A          191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-E---LGATEC---LNPKDYDKPI---YEVICEKTN  259 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-H---TTCSEE---ECGGGCSSCH---HHHHHHHTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-H---cCCcEE---EecccccchH---HHHHHHHhC
Confidence            5889999995 9999999988888898 7999999988876543 2   243322   24432 1122   22333322 


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcC-CEEEEEeccC
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKG-SSVVLISSIA  149 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~-~~iv~~sS~~  149 (226)
                      +.+|++|.++|..                          ...+.++..++++ |+++.++...
T Consensus       260 gg~Dvvid~~g~~--------------------------~~~~~~~~~l~~~~G~iv~~G~~~  296 (373)
T 1p0f_A          260 GGVDYAVECAGRI--------------------------ETMMNALQSTYCGSGVTVVLGLAS  296 (373)
T ss_dssp             SCBSEEEECSCCH--------------------------HHHHHHHHTBCTTTCEEEECCCCC
T ss_pred             CCCCEEEECCCCH--------------------------HHHHHHHHHHhcCCCEEEEEccCC
Confidence            4799999999841                          1134555666778 9999887543

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.59  E-value=0.00018  Score=61.09  Aligned_cols=73  Identities=27%  Similarity=0.358  Sum_probs=54.3

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      ++.|++++|.|+ |++|+.+++.|...|+ +|++++|+.++.+...+++   +..  .  .+.   +++.+.+       
T Consensus       164 ~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~---g~~--~--~~~---~~l~~~l-------  225 (404)
T 1gpj_A          164 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL---GGE--A--VRF---DELVDHL-------  225 (404)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH---TCE--E--CCG---GGHHHHH-------
T ss_pred             cccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc---CCc--e--ecH---HhHHHHh-------
Confidence            468999999998 9999999999999998 8999999988776666555   222  1  122   2232222       


Q ss_pred             CCCCEEEEcCCC
Q 027248           88 GKIDVVVSNAAA   99 (226)
Q Consensus        88 ~~id~li~nag~   99 (226)
                      ...|++|++.|.
T Consensus       226 ~~aDvVi~at~~  237 (404)
T 1gpj_A          226 ARSDVVVSATAA  237 (404)
T ss_dssp             HTCSEEEECCSS
T ss_pred             cCCCEEEEccCC
Confidence            278999998764

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=97.57  E-value=0.00061  Score=54.56  Aligned_cols=66  Identities=18%  Similarity=0.214  Sum_probs=51.5

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id   91 (226)
                      +|+++|.|+ ||.|++++..|.+.|.+|.+..|+.++.+.+. ++.     +...  +..+.              ...|
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~~-----~~~~--~~~~l--------------~~~D  174 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RLG-----CDCF--MEPPK--------------SAFD  174 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HHT-----CEEE--SSCCS--------------SCCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCC-----CeEe--cHHHh--------------ccCC
Confidence            899999996 89999999999999988999999999988877 552     2211  22221              1789


Q ss_pred             EEEEcCCCC
Q 027248           92 VVVSNAAAN  100 (226)
Q Consensus        92 ~li~nag~~  100 (226)
                      ++||+....
T Consensus       175 iVInaTp~G  183 (269)
T 3phh_A          175 LIINATSAS  183 (269)
T ss_dssp             EEEECCTTC
T ss_pred             EEEEcccCC
Confidence            999987654

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.56  E-value=1.5e-05  Score=64.20  Aligned_cols=45  Identities=16%  Similarity=0.194  Sum_probs=39.0

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHH
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAV   53 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~   53 (226)
                      .+++||+++|+|+ ||.|++++..|.+.|+ +|.++.|+.++.+.+.
T Consensus       113 ~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la  158 (277)
T 3don_A          113 EGIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWS  158 (277)
T ss_dssp             TTGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCC
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHH
Confidence            4578999999997 7999999999999998 7999999988765443

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=97.56  E-value=0.00013  Score=60.74  Aligned_cols=99  Identities=12%  Similarity=0.143  Sum_probs=66.6

Q ss_pred             CCCEEEEEcCCCchhHHH-HHHH-HhCCCe-EEEEecCcc---hHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHH
Q 027248           11 QGKVAIVTASTQGIGFGI-AERL-GLEGAS-VVVSSRKQK---NVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTI   84 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~-~~~l-~~~g~~-v~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (226)
                      ++++++|+|+ |++|... ++.+ ...|++ |+.++++++   +++.+ +++   +.+  .+  |..+++ +.+ +.++ 
T Consensus       172 ~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~-~~l---Ga~--~v--~~~~~~-~~~-i~~~-  239 (357)
T 2b5w_A          172 DPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDII-EEL---DAT--YV--DSRQTP-VED-VPDV-  239 (357)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHH-HHT---TCE--EE--ETTTSC-GGG-HHHH-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHH-HHc---CCc--cc--CCCccC-HHH-HHHh-
Confidence            3499999999 9999999 7777 678997 999999987   66543 232   332  22  555433 222 3333 


Q ss_pred             HHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccC
Q 027248           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (226)
Q Consensus        85 ~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~  149 (226)
                        .+.+|++|.++|...                          ..+.++..++++|+++.++...
T Consensus       240 --~gg~Dvvid~~g~~~--------------------------~~~~~~~~l~~~G~iv~~g~~~  276 (357)
T 2b5w_A          240 --YEQMDFIYEATGFPK--------------------------HAIQSVQALAPNGVGALLGVPS  276 (357)
T ss_dssp             --SCCEEEEEECSCCHH--------------------------HHHHHHHHEEEEEEEEECCCCC
T ss_pred             --CCCCCEEEECCCChH--------------------------HHHHHHHHHhcCCEEEEEeCCC
Confidence              347999999988410                          1234455666788999888664

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=97.55  E-value=0.00035  Score=59.23  Aligned_cols=77  Identities=16%  Similarity=0.296  Sum_probs=54.6

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh-C
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF-G   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-~   88 (226)
                      .|++++|+|+ |++|...++.+...|+ +|+.+++++++++.+ +++   |.+..   .|..+.+    +.+++.+.. +
T Consensus       213 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~-~~l---Ga~~v---i~~~~~~----~~~~i~~~t~g  280 (404)
T 3ip1_A          213 PGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLA-KEL---GADHV---IDPTKEN----FVEAVLDYTNG  280 (404)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-HHH---TCSEE---ECTTTSC----HHHHHHHHTTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHc---CCCEE---EcCCCCC----HHHHHHHHhCC
Confidence            5889999998 8999999988888999 799999988776543 333   43322   2554443    333444433 2


Q ss_pred             -CCCEEEEcCCC
Q 027248           89 -KIDVVVSNAAA   99 (226)
Q Consensus        89 -~id~li~nag~   99 (226)
                       .+|++|.++|.
T Consensus       281 ~g~D~vid~~g~  292 (404)
T 3ip1_A          281 LGAKLFLEATGV  292 (404)
T ss_dssp             CCCSEEEECSSC
T ss_pred             CCCCEEEECCCC
Confidence             69999999985

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=97.50  E-value=0.0003  Score=59.11  Aligned_cols=81  Identities=17%  Similarity=0.283  Sum_probs=56.9

Q ss_pred             cCCCEEEEEc-CCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248           10 FQGKVAIVTA-STQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus        10 ~~gk~vlItG-a~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      -.|++++|.| |+|++|...++.+...|++|+.+++++++++.+.    +.+.+..   .|..+.+..+.+.+....  .
T Consensus       169 ~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~----~lGa~~~---~~~~~~~~~~~v~~~t~~--~  239 (379)
T 3iup_A          169 LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLK----AQGAVHV---CNAASPTFMQDLTEALVS--T  239 (379)
T ss_dssp             HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHH----HTTCSCE---EETTSTTHHHHHHHHHHH--H
T ss_pred             cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH----hCCCcEE---EeCCChHHHHHHHHHhcC--C
Confidence            3688999997 8999999999988889999999999887765543    2344332   355554433333332222  2


Q ss_pred             CCCEEEEcCCC
Q 027248           89 KIDVVVSNAAA   99 (226)
Q Consensus        89 ~id~li~nag~   99 (226)
                      .+|++|.+.|.
T Consensus       240 g~d~v~d~~g~  250 (379)
T 3iup_A          240 GATIAFDATGG  250 (379)
T ss_dssp             CCCEEEESCEE
T ss_pred             CceEEEECCCc
Confidence            79999999985

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=97.50  E-value=0.00012  Score=60.60  Aligned_cols=117  Identities=15%  Similarity=0.148  Sum_probs=73.8

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCC--e-----EEEEecCc--chHHHHHHHHHhcC-CcEEEEEeeCCCHHHHHHHHHH
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGA--S-----VVVSSRKQ--KNVDEAVVKLKARG-IEVIGVVCHVSNGQQRKNLINQ   82 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~--~-----v~~~~r~~--~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~   82 (226)
                      .+++||||+|.||..++..|+..|.  +     ++++++++  +.++....++.... +....  ..+++  ...     
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~~--~~~~~--~~~-----   74 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKD--VIATD--KEE-----   74 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEE--EEEES--CHH-----
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccCC--EEEcC--CcH-----
Confidence            4699999999999999999998874  4     99999975  35555555665532 22211  11221  111     


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCC-EEEEEecc
Q 027248           83 TIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGS-SVVLISSI  148 (226)
Q Consensus        83 ~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~-~iv~~sS~  148 (226)
                        +.+...|++|+.||.....+    .+.   .+.++.|......+...+..+- .++ +++.+|..
T Consensus        75 --~~~~daDvVvitAg~prkpG----~tR---~dll~~N~~i~~~i~~~i~~~~-~~~~~vivvsNP  131 (333)
T 5mdh_A           75 --IAFKDLDVAILVGSMPRRDG----MER---KDLLKANVKIFKCQGAALDKYA-KKSVKVIVVGNP  131 (333)
T ss_dssp             --HHTTTCSEEEECCSCCCCTT----CCT---TTTHHHHHHHHHHHHHHHHHHS-CTTCEEEECSSS
T ss_pred             --HHhCCCCEEEEeCCCCCCCC----CCH---HHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEcCCc
Confidence              12348999999998754211    122   3456778777777766666552 234 57777654

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=97.50  E-value=0.00042  Score=58.11  Aligned_cols=102  Identities=16%  Similarity=0.218  Sum_probs=68.4

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCC-HHHHHHHHHHHHHH-h
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN-GQQRKNLINQTIEK-F   87 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~-~   87 (226)
                      .|++++|+|+ |++|...++.+...|+ +|+.+++++++++.+ +   +.+.+..   .|..+ .+++   .+.+.+. .
T Consensus       193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a-~---~lGa~~v---i~~~~~~~~~---~~~i~~~~~  261 (378)
T 3uko_A          193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETA-K---KFGVNEF---VNPKDHDKPI---QEVIVDLTD  261 (378)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHH-H---TTTCCEE---ECGGGCSSCH---HHHHHHHTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-H---HcCCcEE---EccccCchhH---HHHHHHhcC
Confidence            5889999998 9999999998888999 799999999887643 2   2343332   24442 1222   2233332 2


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcC-CEEEEEeccC
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKG-SSVVLISSIA  149 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~-~~iv~~sS~~  149 (226)
                      +.+|++|.++|..                          ...+.++..++++ |+++.++...
T Consensus       262 gg~D~vid~~g~~--------------------------~~~~~~~~~l~~g~G~iv~~G~~~  298 (378)
T 3uko_A          262 GGVDYSFECIGNV--------------------------SVMRAALECCHKGWGTSVIVGVAA  298 (378)
T ss_dssp             SCBSEEEECSCCH--------------------------HHHHHHHHTBCTTTCEEEECSCCC
T ss_pred             CCCCEEEECCCCH--------------------------HHHHHHHHHhhccCCEEEEEcccC
Confidence            4899999998841                          1234455666775 8999887643

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=97.44  E-value=0.0005  Score=57.02  Aligned_cols=117  Identities=14%  Similarity=0.156  Sum_probs=71.8

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCC--CeEEEEecCcchHHHHHHHHHhcC---CcEEEEEeeCCCHHHHHHHHHHHH
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEG--ASVVVSSRKQKNVDEAVVKLKARG---IEVIGVVCHVSNGQQRKNLINQTI   84 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~   84 (226)
                      +.+++|.|+|++|.+|..++..++..|  .+|+++++++++++....++....   .++.+ .   ++.   .       
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~-t---~d~---~-------   71 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTF-T---SDI---K-------   71 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEE-E---SCH---H-------
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEE-c---CCH---H-------
Confidence            346789999999999999999999998  479999999887776655555431   11111 0   111   1       


Q ss_pred             HHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCE-EEEEecc
Q 027248           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSS-VVLISSI  148 (226)
Q Consensus        85 ~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~-iv~~sS~  148 (226)
                      +.+..-|++|..||....  +  ..+.   .+.+..|..-...+.+.+..+- .++. ++.+|..
T Consensus        72 ~al~dADvVvitaG~p~k--p--G~~R---~dLl~~N~~I~~~i~~~i~~~~-p~a~~vlvvsNP  128 (343)
T 3fi9_A           72 EALTDAKYIVSSGGAPRK--E--GMTR---EDLLKGNAEIAAQLGKDIKSYC-PDCKHVIIIFNP  128 (343)
T ss_dssp             HHHTTEEEEEECCC-----------CH---HHHHHHHHHHHHHHHHHHHHHC-TTCCEEEECSSS
T ss_pred             HHhCCCCEEEEccCCCCC--C--CCCH---HHHHHHHHHHHHHHHHHHHHhc-cCcEEEEEecCc
Confidence            123478999999997431  1  1222   3445677655555555555442 3453 6666644

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=97.42  E-value=0.0039  Score=52.29  Aligned_cols=84  Identities=13%  Similarity=0.122  Sum_probs=57.4

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeC-----------CCHHHHHH
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHV-----------SNGQQRKN   78 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv-----------~~~~~v~~   78 (226)
                      +.+++++|+|+ |.+|...++.+...|++|++.+|+.++++.+.+ +   +.++  +..|+           ..++....
T Consensus       182 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~-l---Ga~~--~~l~~~~~~~~gya~~~~~~~~~~  254 (381)
T 3p2y_A          182 VKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS-V---GAQW--LDLGIDAAGEGGYARELSEAERAQ  254 (381)
T ss_dssp             ECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH-T---TCEE--CCCC-------------CHHHHHH
T ss_pred             cCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c---CCeE--EeccccccccccchhhhhHHHHhh
Confidence            47889999998 799999999999999999999999988766543 2   3221  11111           11122223


Q ss_pred             HHHHHHHHhCCCCEEEEcCCCC
Q 027248           79 LINQTIEKFGKIDVVVSNAAAN  100 (226)
Q Consensus        79 ~~~~~~~~~~~id~li~nag~~  100 (226)
                      -.+.+.+.....|++|+++.+.
T Consensus       255 ~~~~l~e~l~~aDIVI~tv~iP  276 (381)
T 3p2y_A          255 QQQALEDAITKFDIVITTALVP  276 (381)
T ss_dssp             HHHHHHHHHTTCSEEEECCCCT
T ss_pred             hHHHHHHHHhcCCEEEECCCCC
Confidence            3344445557999999887553

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.39  E-value=0.001  Score=54.81  Aligned_cols=117  Identities=12%  Similarity=0.051  Sum_probs=68.7

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCC--eEEEEecCcchHHHHHHHHHhcC---CcEEEEEeeCCCHHHHHHHHHHH
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKARG---IEVIGVVCHVSNGQQRKNLINQT   83 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~   83 (226)
                      +..++++.|+|+ |.+|.+++..|+..|.  ++++.++++++++....++....   ..+.+. .|  +.          
T Consensus         6 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~-~~--~~----------   71 (326)
T 3vku_A            6 DKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIY-SA--EY----------   71 (326)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEE-EC--CG----------
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEE-EC--cH----------
Confidence            445678999996 9999999999999986  79999999888877666665432   122222 12  11          


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEecc
Q 027248           84 IEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (226)
Q Consensus        84 ~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~  148 (226)
                       +.+..-|++|..||.....+    .+.   ...++.|..-...+.+.+..+ ..++.++++|..
T Consensus        72 -~a~~~aDiVvi~ag~~~kpG----~tR---~dL~~~N~~I~~~i~~~i~~~-~p~a~ilvvtNP  127 (326)
T 3vku_A           72 -SDAKDADLVVITAGAPQKPG----ETR---LDLVNKNLKILKSIVDPIVDS-GFNGIFLVAANP  127 (326)
T ss_dssp             -GGGTTCSEEEECCCCC-----------------------CHHHHHHHHHTT-TCCSEEEECSSS
T ss_pred             -HHhcCCCEEEECCCCCCCCC----chH---HHHHHHHHHHHHHHHHHHHhc-CCceEEEEccCc
Confidence             12348999999999753211    122   344566665555555555443 235677777654

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=97.38  E-value=0.0003  Score=58.39  Aligned_cols=101  Identities=18%  Similarity=0.256  Sum_probs=67.9

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC-
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG-   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~-   88 (226)
                      .|++++|+|+ |++|...++.+...|+ +|+.+++++++++.+ +++   +.+..   .|..+.+    +.+++.+..+ 
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~-~~l---Ga~~v---i~~~~~~----~~~~v~~~t~g  233 (352)
T 3fpc_A          166 LGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIA-LEY---GATDI---INYKNGD----IVEQILKATDG  233 (352)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHH-HHH---TCCEE---ECGGGSC----HHHHHHHHTTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHh---CCceE---EcCCCcC----HHHHHHHHcCC
Confidence            5889999985 9999999988888999 799999988766433 333   33322   2444433    3334444332 


Q ss_pred             -CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccC
Q 027248           89 -KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (226)
Q Consensus        89 -~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~  149 (226)
                       .+|++|.++|...                          ..+.++..++++|+++.++...
T Consensus       234 ~g~D~v~d~~g~~~--------------------------~~~~~~~~l~~~G~~v~~G~~~  269 (352)
T 3fpc_A          234 KGVDKVVIAGGDVH--------------------------TFAQAVKMIKPGSDIGNVNYLG  269 (352)
T ss_dssp             CCEEEEEECSSCTT--------------------------HHHHHHHHEEEEEEEEECCCCC
T ss_pred             CCCCEEEECCCChH--------------------------HHHHHHHHHhcCCEEEEecccC
Confidence             6999999988521                          1334555667788998887654

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=97.38  E-value=0.0013  Score=55.09  Aligned_cols=78  Identities=12%  Similarity=0.087  Sum_probs=54.7

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh-C
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF-G   88 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-~   88 (226)
                      -.|++++|+|++|++|...++.....|++|+.+. ++++++ ..++   .|.+..   .|..+.+.    .+++.+.. +
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~-~~~~---lGa~~v---i~~~~~~~----~~~v~~~t~g  230 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFD-LAKS---RGAEEV---FDYRAPNL----AQTIRTYTKN  230 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHH-HHHH---TTCSEE---EETTSTTH----HHHHHHHTTT
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHH-HHHH---cCCcEE---EECCCchH----HHHHHHHccC
Confidence            4689999999999999999999999999988876 565554 3333   344332   36655443    33344332 4


Q ss_pred             CCCEEEEcCCC
Q 027248           89 KIDVVVSNAAA   99 (226)
Q Consensus        89 ~id~li~nag~   99 (226)
                      ++|+++.+.|.
T Consensus       231 ~~d~v~d~~g~  241 (371)
T 3gqv_A          231 NLRYALDCITN  241 (371)
T ss_dssp             CCCEEEESSCS
T ss_pred             CccEEEECCCc
Confidence            69999999985

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=97.34  E-value=0.0012  Score=52.29  Aligned_cols=81  Identities=15%  Similarity=0.263  Sum_probs=55.4

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCc-------------------chHHHHHHHHHhcCCcEE--EE
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQ-------------------KNVDEAVVKLKARGIEVI--GV   66 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~~~~~~~~~~--~~   66 (226)
                      .+++++|+|.|+ ||+|.++++.|+..|. ++.+++++.                   .+.+.+.+.+.+..+.+.  .+
T Consensus        25 ~l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~  103 (251)
T 1zud_1           25 KLLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTAL  103 (251)
T ss_dssp             HHHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEE
Confidence            356789999997 6799999999999997 588887653                   566677777776555543  33


Q ss_pred             EeeCCCHHHHHHHHHHHHHHhCCCCEEEEcCC
Q 027248           67 VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAA   98 (226)
Q Consensus        67 ~~Dv~~~~~v~~~~~~~~~~~~~id~li~nag   98 (226)
                      ..+++ .+.++++++       ..|+||++..
T Consensus       104 ~~~~~-~~~~~~~~~-------~~DvVi~~~d  127 (251)
T 1zud_1          104 QQRLT-GEALKDAVA-------RADVVLDCTD  127 (251)
T ss_dssp             CSCCC-HHHHHHHHH-------HCSEEEECCS
T ss_pred             eccCC-HHHHHHHHh-------cCCEEEECCC
Confidence            33333 334444433       6789987643

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=97.33  E-value=0.00076  Score=56.15  Aligned_cols=77  Identities=14%  Similarity=0.222  Sum_probs=54.1

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhC-CCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC-
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLE-GASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG-   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~-   88 (226)
                      .|++++|+|+ |++|...++.+... |++|+.+++++++++.+. +   .|.+..   .|..++  +.+.+.++.  .+ 
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~-~---lGa~~v---i~~~~~--~~~~v~~~~--~g~  253 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-R---LGADHV---VDARRD--PVKQVMELT--RGR  253 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-H---TTCSEE---EETTSC--HHHHHHHHT--TTC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-H---hCCCEE---Eeccch--HHHHHHHHh--CCC
Confidence            5899999999 89999999888888 999999999887765543 2   343332   365554  222222221  13 


Q ss_pred             CCCEEEEcCCC
Q 027248           89 KIDVVVSNAAA   99 (226)
Q Consensus        89 ~id~li~nag~   99 (226)
                      .+|++|.++|.
T Consensus       254 g~Dvvid~~G~  264 (359)
T 1h2b_A          254 GVNVAMDFVGS  264 (359)
T ss_dssp             CEEEEEESSCC
T ss_pred             CCcEEEECCCC
Confidence            69999999984

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=97.33  E-value=0.00032  Score=54.78  Aligned_cols=72  Identities=6%  Similarity=-0.041  Sum_probs=53.4

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id   91 (226)
                      .+.++|.|+ |.+|+.+++.|.+.|+ |++++++++..+...     .  .+.++.+|.++++.++++      .....|
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-----~--~~~~i~gd~~~~~~l~~a------~i~~ad   73 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR-----S--GANFVHGDPTRVSDLEKA------NVRGAR   73 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-----T--TCEEEESCTTCHHHHHHT------TCTTCS
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-----c--CCeEEEcCCCCHHHHHhc------Ccchhc
Confidence            367899997 8999999999999999 999999987765443     2  366788899888765443      123677


Q ss_pred             EEEEcCC
Q 027248           92 VVVSNAA   98 (226)
Q Consensus        92 ~li~nag   98 (226)
                      .+|...+
T Consensus        74 ~vi~~~~   80 (234)
T 2aef_A           74 AVIVDLE   80 (234)
T ss_dssp             EEEECCS
T ss_pred             EEEEcCC
Confidence            7776543

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=97.32  E-value=0.0049  Score=50.49  Aligned_cols=113  Identities=15%  Similarity=0.105  Sum_probs=71.6

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCC--eEEEEecCcchHHHHHHHHHhc---C-CcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKAR---G-IEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~---~-~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      .+|.|+|+ |.+|..++..|+..|.  +|++.++++++++....++...   . .++.+. .|  +.+           .
T Consensus         7 ~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~-~~--~~~-----------a   71 (317)
T 3d0o_A            7 NKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVK-AG--EYS-----------D   71 (317)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEE-EC--CGG-----------G
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEE-eC--CHH-----------H
Confidence            46889998 9999999999998884  7999999987776544444321   1 223222 22  211           1


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEecc
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~  148 (226)
                      +..-|++|..+|.....    ..+..   ..+..|..-...+.+.+..+ ..++.++++|..
T Consensus        72 ~~~aDvVvi~ag~~~~~----g~~r~---dl~~~n~~i~~~i~~~i~~~-~p~a~viv~tNP  125 (317)
T 3d0o_A           72 CHDADLVVICAGAAQKP----GETRL---DLVSKNLKIFKSIVGEVMAS-KFDGIFLVATNP  125 (317)
T ss_dssp             GTTCSEEEECCCCCCCT----TCCHH---HHHHHHHHHHHHHHHHHHHT-TCCSEEEECSSS
T ss_pred             hCCCCEEEECCCCCCCC----CCcHH---HHHHHHHHHHHHHHHHHHHh-CCCcEEEEecCc
Confidence            34899999999975421    12232   34566665555555555555 446777776543

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=97.32  E-value=0.00089  Score=55.94  Aligned_cols=101  Identities=10%  Similarity=0.166  Sum_probs=67.6

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh-C
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF-G   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-~   88 (226)
                      .|++++|+|+ |++|...++.+...|+ +|+.+++++++++.+ +++   +.+..   .|..+.+.    .+++.+.. +
T Consensus       190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a-~~l---Ga~~v---i~~~~~~~----~~~~~~~~~g  257 (371)
T 1f8f_A          190 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA-KQL---GATHV---INSKTQDP----VAAIKEITDG  257 (371)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HHH---TCSEE---EETTTSCH----HHHHHHHTTS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHc---CCCEE---ecCCccCH----HHHHHHhcCC
Confidence            5889999995 8999999988888898 699999988776544 333   33322   25544332    23333322 3


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccC
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~  149 (226)
                      .+|++|.++|..                          ...+.++..++++|+++.++...
T Consensus       258 g~D~vid~~g~~--------------------------~~~~~~~~~l~~~G~iv~~G~~~  292 (371)
T 1f8f_A          258 GVNFALESTGSP--------------------------EILKQGVDALGILGKIAVVGAPQ  292 (371)
T ss_dssp             CEEEEEECSCCH--------------------------HHHHHHHHTEEEEEEEEECCCCS
T ss_pred             CCcEEEECCCCH--------------------------HHHHHHHHHHhcCCEEEEeCCCC
Confidence            799999999841                          01344556667788999887654

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=97.32  E-value=0.0012  Score=54.61  Aligned_cols=101  Identities=17%  Similarity=0.159  Sum_probs=67.7

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhC-CCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC-
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLE-GASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG-   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~-   88 (226)
                      .|++++|+|+ |++|...++.+... |.+|+.+++++++++.+.    +.+.+..+   |-.+ +    +.+++.+..+ 
T Consensus       171 ~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~----~lGa~~~i---~~~~-~----~~~~v~~~t~g  237 (345)
T 3jv7_A          171 PGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALAR----EVGADAAV---KSGA-G----AADAIRELTGG  237 (345)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHH----HTTCSEEE---ECST-T----HHHHHHHHHGG
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH----HcCCCEEE---cCCC-c----HHHHHHHHhCC
Confidence            5899999998 99999988877777 688999999987765442    23444322   3332 2    2333433322 


Q ss_pred             -CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCC
Q 027248           89 -KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG  150 (226)
Q Consensus        89 -~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~  150 (226)
                       .+|+++.+.|..                          ...+.++..++++|+++.++...+
T Consensus       238 ~g~d~v~d~~G~~--------------------------~~~~~~~~~l~~~G~iv~~G~~~~  274 (345)
T 3jv7_A          238 QGATAVFDFVGAQ--------------------------STIDTAQQVVAVDGHISVVGIHAG  274 (345)
T ss_dssp             GCEEEEEESSCCH--------------------------HHHHHHHHHEEEEEEEEECSCCTT
T ss_pred             CCCeEEEECCCCH--------------------------HHHHHHHHHHhcCCEEEEECCCCC
Confidence             799999998841                          124455566677889998876544

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.31  E-value=0.0014  Score=53.01  Aligned_cols=88  Identities=14%  Similarity=0.151  Sum_probs=63.9

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCc------------------chHHHHHHHHHhcCCc--EEEEE
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQ------------------KNVDEAVVKLKARGIE--VIGVV   67 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~------------------~~~~~~~~~~~~~~~~--~~~~~   67 (226)
                      .+++++|+|.|+ ||+|.++++.|+..|. ++.++|.+.                  .+.+.+.+.+.+.++.  +..+.
T Consensus        33 kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~  111 (292)
T 3h8v_A           33 KIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHN  111 (292)
T ss_dssp             GGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEec
Confidence            456789999975 7999999999999995 699999886                  5666777777766654  44555


Q ss_pred             eeCCCHHHHHHHHHHHHHH----hCCCCEEEEcC
Q 027248           68 CHVSNGQQRKNLINQTIEK----FGKIDVVVSNA   97 (226)
Q Consensus        68 ~Dv~~~~~v~~~~~~~~~~----~~~id~li~na   97 (226)
                      .++++.+.++.+++.+...    ....|+||.+.
T Consensus       112 ~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~  145 (292)
T 3h8v_A          112 YNITTVENFQHFMDRISNGGLEEGKPVDLVLSCV  145 (292)
T ss_dssp             CCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECC
T ss_pred             ccCCcHHHHHHHhhhhcccccccCCCCCEEEECC
Confidence            5677767777666544321    13789998654

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=97.28  E-value=0.013  Score=48.45  Aligned_cols=120  Identities=12%  Similarity=0.105  Sum_probs=71.0

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCC-------eEEEEecCcc--hHHHHHHHHHhcCC--cEEEEEeeCCCHHHHHH
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGA-------SVVVSSRKQK--NVDEAVVKLKARGI--EVIGVVCHVSNGQQRKN   78 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~-------~v~~~~r~~~--~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~   78 (226)
                      .+.-+|.|+||+|+||..++..|++...       ++.+.+..+.  .++...-++..-..  ...+...  ++..    
T Consensus        22 ~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~--~~~~----   95 (345)
T 4h7p_A           22 MSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVT--ADPR----   95 (345)
T ss_dssp             CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEE--SCHH----
T ss_pred             CCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEc--CChH----
Confidence            3455899999999999999999987542       6899998764  33444444544321  1222211  1221    


Q ss_pred             HHHHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEecc
Q 027248           79 LINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (226)
Q Consensus        79 ~~~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~  148 (226)
                            +.+..-|++|..||.....    ..+.+|   .++.|..-.-.+.+.+..+-.++..|+.+|..
T Consensus        96 ------~a~~~advVvi~aG~prkp----GmtR~D---Ll~~Na~I~~~~~~~i~~~a~~~~~vlvvsNP  152 (345)
T 4h7p_A           96 ------VAFDGVAIAIMCGAFPRKA----GMERKD---LLEMNARIFKEQGEAIAAVAASDCRVVVVGNP  152 (345)
T ss_dssp             ------HHTTTCSEEEECCCCCCCT----TCCHHH---HHHHHHHHHHHHHHHHHHHSCTTCEEEECSSS
T ss_pred             ------HHhCCCCEEEECCCCCCCC----CCCHHH---HHHHhHHHHHHHHHHHHhhccCceEEEEeCCC
Confidence                  1245899999999986532    234444   46677655544554444432234556666543

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=97.28  E-value=0.0014  Score=55.55  Aligned_cols=43  Identities=12%  Similarity=0.093  Sum_probs=38.5

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHH
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEA   52 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~   52 (226)
                      .+.|++++|+|+ |.+|+..++.+...|++|+++++++++++..
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~  211 (401)
T 1x13_A          169 KVPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV  211 (401)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            367999999996 8999999999999999999999999877664

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.23  E-value=0.004  Score=51.25  Aligned_cols=115  Identities=16%  Similarity=0.060  Sum_probs=75.0

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCC--eEEEEecCcchHHHHHHHHHhcC----CcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKARG----IEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      .+++.|+|+ |.+|.+++..|+..|.  +|+++++++++++....++....    ..+.+...|   .           +
T Consensus         5 ~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~---~-----------~   69 (326)
T 3pqe_A            5 VNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT---Y-----------E   69 (326)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC---G-----------G
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc---H-----------H
Confidence            467899996 9999999999999986  89999999888777665565431    223333222   1           1


Q ss_pred             HhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccC
Q 027248           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~  149 (226)
                      .+..-|++|..+|.....    ..+.   ...+..|..-...+.+.+..+ ..++.++++|...
T Consensus        70 a~~~aDvVvi~ag~p~kp----G~~R---~dL~~~N~~Iv~~i~~~I~~~-~p~a~vlvvtNPv  125 (326)
T 3pqe_A           70 DCKDADIVCICAGANQKP----GETR---LELVEKNLKIFKGIVSEVMAS-GFDGIFLVATNPV  125 (326)
T ss_dssp             GGTTCSEEEECCSCCCCT----TCCH---HHHHHHHHHHHHHHHHHHHHT-TCCSEEEECSSSH
T ss_pred             HhCCCCEEEEecccCCCC----CccH---HHHHHHHHHHHHHHHHHHHHh-cCCeEEEEcCChH
Confidence            234889999999975321    1233   234666765555555555543 2456777777543

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=97.22  E-value=0.0029  Score=53.47  Aligned_cols=45  Identities=11%  Similarity=0.079  Sum_probs=39.1

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHH
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVV   54 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~   54 (226)
                      .+.+.+++|+|+ |.+|...++.+...|++|++.++++++++...+
T Consensus       187 ~v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~  231 (405)
T 4dio_A          187 TVPAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVAS  231 (405)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHH
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence            356889999998 799999999999999999999999987666543

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=97.18  E-value=0.0049  Score=50.78  Aligned_cols=118  Identities=10%  Similarity=0.099  Sum_probs=77.6

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCC--eEEEEecCcchHHHHHHHHHhcC---CcEEEEEeeCCCHHHHHHHHHHHH
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKARG---IEVIGVVCHVSNGQQRKNLINQTI   84 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~   84 (226)
                      ...+.+.|+|+ |.+|.+++..|+..|.  +|++.++++++++....++....   ........+  +.+          
T Consensus        17 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~--d~~----------   83 (331)
T 4aj2_A           17 VPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSK--DYS----------   83 (331)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECS--SGG----------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcC--CHH----------
Confidence            45678999997 9999999999999986  79999999888877766666431   111222121  211          


Q ss_pred             HHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccC
Q 027248           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (226)
Q Consensus        85 ~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~  149 (226)
                       .+..-|++|..||.....+    .+.   .+.++.|.--...+.+.+..+ ..++.++++|...
T Consensus        84 -~~~~aDiVvi~aG~~~kpG----~tR---~dL~~~N~~I~~~i~~~i~~~-~p~a~vlvvtNPv  139 (331)
T 4aj2_A           84 -VTANSKLVIITAGARQQEG----ESR---LNLVQRNVNIFKFIIPNVVKY-SPQCKLLIVSNPV  139 (331)
T ss_dssp             -GGTTEEEEEECCSCCCCTT----CCG---GGGHHHHHHHHHHHHHHHHHH-CTTCEEEECSSSH
T ss_pred             -HhCCCCEEEEccCCCCCCC----ccH---HHHHHHHHHHHHHHHHHHHHH-CCCeEEEEecChH
Confidence             1348999999999754211    222   235566765555556555554 4467788777553

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=97.17  E-value=0.0081  Score=48.65  Aligned_cols=112  Identities=9%  Similarity=-0.046  Sum_probs=69.2

Q ss_pred             EEEEcCCCchhHHHHHHHHhCCC--eEEEEecCcchHHHHHHHHHhc----CCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248           15 AIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKAR----GIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      +.|+|+ |.+|.+++..|+..|.  +|++.++++++++....++.+.    .....+...  +|.+.           +.
T Consensus         3 I~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~a-----------~~   68 (294)
T 1oju_A            3 LGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYSL-----------LK   68 (294)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGGG-----------GT
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CCHHH-----------hC
Confidence            788999 9999999999999997  8999999998876433333221    122222211  12221           24


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEecc
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~  148 (226)
                      .-|++|..+|.....    ..+..+   .+..|..-...+.+.+..+ ..++.++.+|..
T Consensus        69 ~aDiVViaag~~~kp----G~~R~d---l~~~N~~i~~~i~~~i~~~-~p~a~iivvsNP  120 (294)
T 1oju_A           69 GSEIIVVTAGLARKP----GMTRLD---LAHKNAGIIKDIAKKIVEN-APESKILVVTNP  120 (294)
T ss_dssp             TCSEEEECCCCCCCS----SCCHHH---HHHHHHHHHHHHHHHHHTT-STTCEEEECSSS
T ss_pred             CCCEEEECCCCCCCC----CCcHHH---HHHHHHHHHHHHHHHHHhh-CCCeEEEEeCCc
Confidence            789999999975422    123333   3566655554555555444 345677777744

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=97.11  E-value=0.00034  Score=56.42  Aligned_cols=46  Identities=17%  Similarity=0.204  Sum_probs=39.8

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHH
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVV   54 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~   54 (226)
                      .+++||+++|+|+ ||.|++++..|.+.|+ +|.++.|+.++.+.+.+
T Consensus       118 ~~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~  164 (282)
T 3fbt_A          118 VEIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYG  164 (282)
T ss_dssp             CCCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCT
T ss_pred             CCccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence            4578999999997 6999999999999998 79999999887666544

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=97.11  E-value=0.00082  Score=55.02  Aligned_cols=74  Identities=20%  Similarity=0.270  Sum_probs=51.2

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      .|++++|+||+|++|...++.+...|++|+.+++++ +. +..+++   +.+..   .|..+.+...+       ....+
T Consensus       152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~-~~-~~~~~l---Ga~~~---i~~~~~~~~~~-------~~~g~  216 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKR-NH-AFLKAL---GAEQC---INYHEEDFLLA-------ISTPV  216 (321)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHH-HH-HHHHHH---TCSEE---EETTTSCHHHH-------CCSCE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccc-hH-HHHHHc---CCCEE---EeCCCcchhhh-------hccCC
Confidence            589999999999999999999999999998887533 32 333333   44432   35555442211       12489


Q ss_pred             CEEEEcCCC
Q 027248           91 DVVVSNAAA   99 (226)
Q Consensus        91 d~li~nag~   99 (226)
                      |+++.+.|.
T Consensus       217 D~v~d~~g~  225 (321)
T 3tqh_A          217 DAVIDLVGG  225 (321)
T ss_dssp             EEEEESSCH
T ss_pred             CEEEECCCc
Confidence            999999883

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=97.09  E-value=0.0094  Score=48.96  Aligned_cols=116  Identities=17%  Similarity=0.116  Sum_probs=71.2

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhc----CCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKAR----GIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      .+.+.|+|+ |.+|.+++..|+..|. +|++.++++++++....++.+.    +....+...+  +.+           .
T Consensus         7 ~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~--d~~-----------a   72 (324)
T 3gvi_A            7 RNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGAN--DYA-----------A   72 (324)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEES--SGG-----------G
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeC--CHH-----------H
Confidence            467899998 9999999999999998 9999999998876544444332    1112121111  111           2


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccC
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~  149 (226)
                      +..-|++|..+|.....+    .+.   .+.+..|..-...+.+.+..+ ..++.++++|...
T Consensus        73 ~~~aDiVIiaag~p~k~G----~~R---~dl~~~N~~i~~~i~~~i~~~-~p~a~iivvtNPv  127 (324)
T 3gvi_A           73 IEGADVVIVTAGVPRKPG----MSR---DDLLGINLKVMEQVGAGIKKY-APEAFVICITNPL  127 (324)
T ss_dssp             GTTCSEEEECCSCCCC------------CHHHHHHHHHHHHHHHHHHHH-CTTCEEEECCSSH
T ss_pred             HCCCCEEEEccCcCCCCC----CCH---HHHHHhhHHHHHHHHHHHHHH-CCCeEEEecCCCc
Confidence            348899999999754211    122   234455655555555555444 2456777777543

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=97.02  E-value=0.0042  Score=51.28  Aligned_cols=89  Identities=9%  Similarity=0.056  Sum_probs=57.1

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCc-------------------chHHHHHHHHHhcCCcEEEEEe
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQ-------------------KNVDEAVVKLKARGIEVIGVVC   68 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~   68 (226)
                      .+++++|+|.|+ ||+|.++++.|+..|. ++.+++++.                   .+.+.+.+.+.+..+.+.+...
T Consensus        31 kL~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v~~~  109 (340)
T 3rui_A           31 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV  109 (340)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred             HHhCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEEEEE
Confidence            356889999986 7999999999999996 588988864                   4566677777776665554433


Q ss_pred             e--C-------CCHHHHHHHHHHHHHHhCCCCEEEEcCC
Q 027248           69 H--V-------SNGQQRKNLINQTIEKFGKIDVVVSNAA   98 (226)
Q Consensus        69 D--v-------~~~~~v~~~~~~~~~~~~~id~li~nag   98 (226)
                      +  +       ++.+....-.+.+.+.+...|+||++.-
T Consensus       110 ~~~i~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~tD  148 (340)
T 3rui_A          110 KLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVD  148 (340)
T ss_dssp             CCCCCCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECCS
T ss_pred             eccccccCcccchhhhhcCCHHHHHhhhccCCEEEecCC
Confidence            3  3       1211111111222223347899987654

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=97.02  E-value=0.00054  Score=63.10  Aligned_cols=98  Identities=15%  Similarity=0.211  Sum_probs=64.1

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh--C
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF--G   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--~   88 (226)
                      .|++++|.||+||+|.+.++.....|++|+.+++++ +.+...     .+.+..   .|-++.+    +.+++.+..  .
T Consensus       345 ~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~-k~~~l~-----lga~~v---~~~~~~~----~~~~i~~~t~g~  411 (795)
T 3slk_A          345 PGESLLVHSAAGGVGMAAIQLARHLGAEVYATASED-KWQAVE-----LSREHL---ASSRTCD----FEQQFLGATGGR  411 (795)
T ss_dssp             TTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGG-GGGGSC-----SCGGGE---ECSSSST----HHHHHHHHSCSS
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChH-Hhhhhh-----cChhhe---eecCChh----HHHHHHHHcCCC
Confidence            589999999999999999988888999999988765 332211     222222   2444443    233444433  2


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEecc
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~  148 (226)
                      .+|+++++.|...                           .+..+..++++|++|.++..
T Consensus       412 GvDvVld~~gg~~---------------------------~~~~l~~l~~~Gr~v~iG~~  444 (795)
T 3slk_A          412 GVDVVLNSLAGEF---------------------------ADASLRMLPRGGRFLELGKT  444 (795)
T ss_dssp             CCSEEEECCCTTT---------------------------THHHHTSCTTCEEEEECCST
T ss_pred             CeEEEEECCCcHH---------------------------HHHHHHHhcCCCEEEEeccc
Confidence            6999999876411                           12344556677888887654

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=97.02  E-value=0.00031  Score=55.83  Aligned_cols=43  Identities=14%  Similarity=0.135  Sum_probs=36.5

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHH
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAV   53 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~   53 (226)
                      +++| +++|.|+ ||.|++++..|.+.|+ +|.+.+|+.++.+.+.
T Consensus       106 ~~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la  149 (253)
T 3u62_A          106 EVKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALD  149 (253)
T ss_dssp             CCCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCC
T ss_pred             CCCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH
Confidence            4577 8999987 8999999999999998 7999999987655443

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=97.01  E-value=0.0043  Score=48.91  Aligned_cols=77  Identities=12%  Similarity=0.081  Sum_probs=56.9

Q ss_pred             EEEEEcCCCchhHHHHHHHHhC-CCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCE
Q 027248           14 VAIVTASTQGIGFGIAERLGLE-GASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~   92 (226)
                      +++|.|++|.+|+.+++.+.+. +++++.+....+.++....    ...+   +..|++.++.+...++...+.  .+++
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~----~~~D---vvIDfT~p~a~~~~~~~a~~~--g~~~   72 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTD----GNTE---VVIDFTHPDVVMGNLEFLIDN--GIHA   72 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHH----TTCC---EEEECSCTTTHHHHHHHHHHT--TCEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhc----cCCc---EEEEccChHHHHHHHHHHHHc--CCCE
Confidence            4889999999999999999876 8897755544444443322    2334   345999999988888877765  7889


Q ss_pred             EEEcCCC
Q 027248           93 VVSNAAA   99 (226)
Q Consensus        93 li~nag~   99 (226)
                      ||...|.
T Consensus        73 VigTTG~   79 (245)
T 1p9l_A           73 VVGTTGF   79 (245)
T ss_dssp             EECCCCC
T ss_pred             EEcCCCC
Confidence            9887774

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=97.01  E-value=0.016  Score=47.53  Aligned_cols=114  Identities=17%  Similarity=0.136  Sum_probs=72.6

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhc----CCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKAR----GIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      +++.|+| +|.+|.+++..|+..|. +|++.++++++++....++.+.    +....+...+  +.+           .+
T Consensus         6 ~kI~iiG-aG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~--d~~-----------a~   71 (321)
T 3p7m_A            6 KKITLVG-AGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTN--DYK-----------DL   71 (321)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEES--CGG-----------GG
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcC--CHH-----------HH
Confidence            5688889 49999999999999887 9999999998877655555432    1122221111  111           23


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEecc
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~  148 (226)
                      ..-|++|..+|.....+    .+..   +.+..|..-...+.+.+..+- .++.++++|-.
T Consensus        72 ~~aDvVIi~ag~p~k~G----~~R~---dl~~~N~~i~~~i~~~i~~~~-p~a~vivvtNP  124 (321)
T 3p7m_A           72 ENSDVVIVTAGVPRKPG----MSRD---DLLGINIKVMQTVGEGIKHNC-PNAFVICITNP  124 (321)
T ss_dssp             TTCSEEEECCSCCCCTT----CCHH---HHHHHHHHHHHHHHHHHHHHC-TTCEEEECCSS
T ss_pred             CCCCEEEEcCCcCCCCC----CCHH---HHHHHhHHHHHHHHHHHHHHC-CCcEEEEecCc
Confidence            47899999999754222    2333   345567655555555555442 45677777644

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=97.00  E-value=0.0058  Score=50.01  Aligned_cols=114  Identities=19%  Similarity=0.171  Sum_probs=71.8

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecC--cchHHHHHHHHHhc------CCcEEEEEeeCCCHHHHHHHHH
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRK--QKNVDEAVVKLKAR------GIEVIGVVCHVSNGQQRKNLIN   81 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~--~~~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~v~~~~~   81 (226)
                      +.+++.|+|+ |.+|.+++..|+..|. +|++.+++  +++.+....++...      ..++..  .+  +.        
T Consensus         7 ~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~--t~--d~--------   73 (315)
T 3tl2_A            7 KRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIG--TS--DY--------   73 (315)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEE--ES--CG--------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEE--cC--CH--------
Confidence            3578999996 9999999999999999 99999999  44544433333221      112221  11  11        


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEecc
Q 027248           82 QTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (226)
Q Consensus        82 ~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~  148 (226)
                         +.+...|++|..+|.....    ..+.   .+.+..|..-...+.+.+..+ ..++.++++|..
T Consensus        74 ---~a~~~aDvVIiaag~p~kp----g~~R---~dl~~~N~~i~~~i~~~i~~~-~p~a~vlvvsNP  129 (315)
T 3tl2_A           74 ---ADTADSDVVVITAGIARKP----GMSR---DDLVATNSKIMKSITRDIAKH-SPNAIIVVLTNP  129 (315)
T ss_dssp             ---GGGTTCSEEEECCSCCCCT----TCCH---HHHHHHHHHHHHHHHHHHHHH-CTTCEEEECCSS
T ss_pred             ---HHhCCCCEEEEeCCCCCCC----CCCH---HHHHHHHHHHHHHHHHHHHHh-CCCeEEEECCCh
Confidence               1235899999999975422    1233   334566765555555555544 345677777744

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=96.97  E-value=0.0012  Score=50.57  Aligned_cols=42  Identities=26%  Similarity=0.431  Sum_probs=36.7

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHH
Q 027248           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK   55 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~   55 (226)
                      +++|+||+|.+|.++++.|++.|++|.+.+|++++.+...++
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~   43 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAE   43 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHH
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            478999999999999999999999999999998877665544

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=96.97  E-value=0.0053  Score=50.31  Aligned_cols=113  Identities=13%  Similarity=0.082  Sum_probs=69.2

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCC--eEEEEecCcchHHHHHHHHHhcCC---cEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKARGI---EVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      .+|.|+|+ |.+|..++..|+..|.  +|++.+.++++++....++.+...   ++.+. .  .+.           +.+
T Consensus         8 ~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~--~~~-----------~a~   72 (318)
T 1y6j_A            8 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLY-A--GDY-----------SDV   72 (318)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CG-----------GGG
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEE-E--CCH-----------HHh
Confidence            45888998 9999999999999986  899999998877765555544321   22211 1  111           124


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEecc
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~  148 (226)
                      ..-|++|..+|....  +  ..+..   +.+..|+.-...+.+.+..+ ..++.++++|-.
T Consensus        73 ~~aDvVii~~g~p~k--~--g~~r~---dl~~~n~~i~~~i~~~i~~~-~p~a~viv~tNP  125 (318)
T 1y6j_A           73 KDCDVIVVTAGANRK--P--GETRL---DLAKKNVMIAKEVTQNIMKY-YNHGVILVVSNP  125 (318)
T ss_dssp             TTCSEEEECCCC----------CHH---HHHHHHHHHHHHHHHHHHHH-CCSCEEEECSSS
T ss_pred             CCCCEEEEcCCCCCC--C--CcCHH---HHHHhhHHHHHHHHHHHHHh-CCCcEEEEecCc
Confidence            589999999997531  1  12222   34667776666666666665 346677775433

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=96.97  E-value=0.0082  Score=48.81  Aligned_cols=112  Identities=15%  Similarity=0.104  Sum_probs=66.6

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCCC--eEEEEecCcchHHHHHHHHHhcC---CcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248           14 VAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKARG---IEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      ++.|+|+ |.+|..++..|+..|.  +|++.++++++++....++....   ....+. .+  +.+           .+.
T Consensus         2 kI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~-~~--~~~-----------a~~   66 (304)
T 2v6b_A            2 KVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVW-HG--GHS-----------ELA   66 (304)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEE-EE--CGG-----------GGT
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEE-EC--CHH-----------HhC
Confidence            4888998 9999999999999998  89999999877765444443321   112221 11  211           134


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEecc
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~  148 (226)
                      ..|++|..+|.....+    .+.   .+.+..|+.-...+.+.+.++ ..++.++++|-.
T Consensus        67 ~aDvVIi~~~~~~~~g----~~r---~dl~~~n~~i~~~i~~~i~~~-~p~~~vi~~tNP  118 (304)
T 2v6b_A           67 DAQVVILTAGANQKPG----ESR---LDLLEKNADIFRELVPQITRA-APDAVLLVTSNP  118 (304)
T ss_dssp             TCSEEEECC-------------------CHHHHHHHHHHHHHHHHHH-CSSSEEEECSSS
T ss_pred             CCCEEEEcCCCCCCCC----CcH---HHHHHhHHHHHHHHHHHHHHh-CCCeEEEEecCc
Confidence            8899999998643111    111   234566666666666666665 345666665433

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=96.94  E-value=0.0023  Score=51.97  Aligned_cols=73  Identities=21%  Similarity=0.308  Sum_probs=51.8

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      .++.||+++|.|+ |++|+++++.|...|++|++.+|+.++.+...    +.+.+  .+  +.   ++++++       .
T Consensus       153 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~----~~g~~--~~--~~---~~l~~~-------l  213 (300)
T 2rir_A          153 YTIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARIT----EMGLV--PF--HT---DELKEH-------V  213 (300)
T ss_dssp             SCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HTTCE--EE--EG---GGHHHH-------S
T ss_pred             CCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH----HCCCe--EE--ch---hhHHHH-------h
Confidence            4688999999996 89999999999999999999999886544332    22322  11  21   222222       2


Q ss_pred             CCCCEEEEcCCC
Q 027248           88 GKIDVVVSNAAA   99 (226)
Q Consensus        88 ~~id~li~nag~   99 (226)
                      ...|++|+....
T Consensus       214 ~~aDvVi~~~p~  225 (300)
T 2rir_A          214 KDIDICINTIPS  225 (300)
T ss_dssp             TTCSEEEECCSS
T ss_pred             hCCCEEEECCCh
Confidence            478999988764

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=96.90  E-value=0.0027  Score=52.38  Aligned_cols=115  Identities=14%  Similarity=0.071  Sum_probs=68.0

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhc----C--CcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKAR----G--IEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~----~--~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      .+|.|+|+ |.+|.+++..|+..|. +|++.++++++++.....+...    .  .++.. .   +|.+   +.      
T Consensus        10 ~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-t---~d~~---ea------   75 (331)
T 1pzg_A           10 KKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-E---YSYE---AA------   75 (331)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-E---CSHH---HH------
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEE-e---CCHH---HH------
Confidence            46899998 9999999999999997 9999999998887644333221    1  12221 1   2222   11      


Q ss_pred             HhCCCCEEEEcCCCCCCCCccccc---cHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEecc
Q 027248           86 KFGKIDVVVSNAAANPSVDSILQT---KESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~~~~~---~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~  148 (226)
                       ...-|++|..+|.....+ . +.   +.   ......|..-...+.+.+..+. +++.++++|-.
T Consensus        76 -~~~aDiVi~a~g~p~~~g-~-~~~~~~r---~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~tNP  134 (331)
T 1pzg_A           76 -LTGADCVIVTAGLTKVPG-K-PDSEWSR---NDLLPFNSKIIREIGQNIKKYC-PKTFIIVVTNP  134 (331)
T ss_dssp             -HTTCSEEEECCSCSSCTT-C-CGGGCCG---GGGHHHHHHHHHHHHHHHHHHC-TTCEEEECCSS
T ss_pred             -hCCCCEEEEccCCCCCCC-c-ccCCCCH---HHHHHHHHHHHHHHHHHHHHHC-CCcEEEEEcCc
Confidence             237899999998754211 1 00   11   1224445444445555554442 34556555433

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=96.89  E-value=0.0025  Score=53.61  Aligned_cols=44  Identities=11%  Similarity=0.073  Sum_probs=39.0

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHH
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAV   53 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~   53 (226)
                      .+.|++++|+|+ |++|+..++.+...|++|++.+|++++++...
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~  212 (384)
T 1l7d_A          169 TVPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVE  212 (384)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            568999999996 89999999999999999999999988776543

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=96.89  E-value=0.015  Score=47.52  Aligned_cols=113  Identities=14%  Similarity=0.124  Sum_probs=69.1

Q ss_pred             EEEEcCCCchhHHHHHHHHhCCC--eEEEEecCcchHHHHHHHHHhc----CCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248           15 AIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKAR----GIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      +.|+|+ |.+|.+++..|+..|.  +|++.++++++++....++...    ..+..+...|.  .           +.+.
T Consensus         3 v~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~--~-----------~a~~   68 (314)
T 3nep_X            3 VTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTND--Y-----------GPTE   68 (314)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESS--S-----------GGGT
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECCC--H-----------HHhC
Confidence            788996 9999999999999886  8999999998877555444432    11222221221  1           1234


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccC
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~  149 (226)
                      .-|++|..+|.....+    .+.   .+.+..|..-...+.+.+..+ ..++.++++|...
T Consensus        69 ~aDvVii~ag~~~kpG----~~R---~dl~~~N~~i~~~i~~~i~~~-~p~a~vivvtNPv  121 (314)
T 3nep_X           69 DSDVCIITAGLPRSPG----MSR---DDLLAKNTEIVGGVTEQFVEG-SPDSTIIVVANPL  121 (314)
T ss_dssp             TCSEEEECCCC-----------C---HHHHHHHHHHHHHHHHHHHTT-CTTCEEEECCSSH
T ss_pred             CCCEEEECCCCCCCCC----CCH---HHHHHhhHHHHHHHHHHHHHh-CCCcEEEecCCch
Confidence            8999999999754211    222   344566765555555555443 3456777777543

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=96.86  E-value=0.017  Score=47.43  Aligned_cols=116  Identities=14%  Similarity=0.067  Sum_probs=74.3

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCC--eEEEEecCcchHHHHHHHHHhc---CCcEEEE-EeeCCCHHHHHHHHHHHH
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKAR---GIEVIGV-VCHVSNGQQRKNLINQTI   84 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~-~~Dv~~~~~v~~~~~~~~   84 (226)
                      ..+++.|+|+ |.+|..++..|+..|.  +|++.++++++++....++...   .....+. ..|..+            
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~------------   86 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV------------   86 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS------------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH------------
Confidence            3578999998 9999999999999996  7999999988877665555432   1111222 223321            


Q ss_pred             HHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccC
Q 027248           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (226)
Q Consensus        85 ~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~  149 (226)
                        +..-|++|..||.....+    .+.   .+.+..|..-.-.+.+.+..+ ..++.++++|...
T Consensus        87 --~~daDiVIitaG~p~kpG----~tR---~dll~~N~~I~k~i~~~I~k~-~P~a~ilvvtNPv  141 (330)
T 3ldh_A           87 --SAGSKLVVITAGARQQEG----ESR---LNLVQRNVNIFKFIIPNIVKH-SPDCLKELHPELG  141 (330)
T ss_dssp             --CSSCSEEEECCSCCCCSS----CCT---TGGGHHHHHHHHHHHHHHHHH-CTTCEEEECSSSH
T ss_pred             --hCCCCEEEEeCCCCCCCC----CCH---HHHHHhhHHHHHHHHHHHHhh-CCCceEEeCCCcc
Confidence              248899999999864222    122   234455654444555555554 4467777777543

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=96.84  E-value=0.028  Score=45.87  Aligned_cols=116  Identities=16%  Similarity=0.118  Sum_probs=71.8

Q ss_pred             EEEEEcCCCchhHHHHHHHHhC-C--CeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           14 VAIVTASTQGIGFGIAERLGLE-G--ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~-g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      +|.|+||+|.+|.+++..|..+ +  .+++++++++ +.+...-++........+....-++..          +.+...
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~~~~~~v~~~~~~~~~----------~~~~~a   70 (312)
T 3hhp_A            2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGEDAT----------PALEGA   70 (312)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTSCSSEEEEEECSSCCH----------HHHTTC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCCCCCceEEEecCCCcH----------HHhCCC
Confidence            3789999999999999999875 5  4699999987 555445555543322222211001211          123489


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEecc
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~  148 (226)
                      |++|..||.....    ..+.   .+.++.|..-...+.+.+..+ ..++.++++|..
T Consensus        71 Divii~ag~~rkp----G~~R---~dll~~N~~I~~~i~~~i~~~-~p~a~vlvvtNP  120 (312)
T 3hhp_A           71 DVVLISAGVARKP----GMDR---SDLFNVNAGIVKNLVQQVAKT-CPKACIGIITNP  120 (312)
T ss_dssp             SEEEECCSCSCCT----TCCH---HHHHHHHHHHHHHHHHHHHHH-CTTSEEEECSSC
T ss_pred             CEEEEeCCCCCCC----CCCH---HHHHHHHHHHHHHHHHHHHHH-CCCcEEEEecCc
Confidence            9999999975421    2333   445566766666666665554 345677777643

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=96.82  E-value=0.0025  Score=51.24  Aligned_cols=41  Identities=10%  Similarity=0.106  Sum_probs=36.3

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHH
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAV   53 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~   53 (226)
                      .++.|.|++|.+|.++++.|.+.|++|++.+|++++.+...
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~   52 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQ   52 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH
Confidence            46999999999999999999999999999999987766554

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=96.78  E-value=0.016  Score=47.64  Aligned_cols=114  Identities=12%  Similarity=0.063  Sum_probs=72.6

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCC--eEEEEecCcchHHHHHHHHHhcC---CcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKARG---IEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      .+|.|+|+ |.+|..++..|+..+.  ++++.++++++++....++....   .++.+. .|  +.+           .+
T Consensus        10 ~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~~--~~~-----------a~   74 (326)
T 2zqz_A           10 QKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIY-SA--EYS-----------DA   74 (326)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEE-EC--CGG-----------GG
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEE-EC--CHH-----------Hh
Confidence            57999998 9999999999998885  79999999888877666665431   223222 22  111           13


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccC
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~  149 (226)
                      ..-|++|..+|.....    ..+..   ..+..|..-...+.+.+..+ ..++.|+++|-..
T Consensus        75 ~~aDvVii~ag~~~k~----g~~R~---dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~tNPv  128 (326)
T 2zqz_A           75 KDADLVVITAGAPQKP----GETRL---DLVNKNLKILKSIVDPIVDS-GFNGIFLVAANPV  128 (326)
T ss_dssp             GGCSEEEECCCCC---------CHH---HHHHHHHHHHHHHHHHHHHH-TCCSEEEECSSSH
T ss_pred             CCCCEEEEcCCCCCCC----CCCHH---HHHHHHHHHHHHHHHHHHHH-CCCeEEEEeCCcH
Confidence            4889999999975421    12232   34566665555555555444 3467788775443

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=96.78  E-value=0.013  Score=47.95  Aligned_cols=114  Identities=11%  Similarity=0.077  Sum_probs=70.9

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCC--eEEEEecCcchHHHHHHHHHhcC---CcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKARG---IEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      .+|.|+|+ |.+|.+++..|+..+.  ++++.++++++++....++....   .++.+. .|  +.+           .+
T Consensus         6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~-~~--~~~-----------a~   70 (318)
T 1ez4_A            6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIY-SG--EYS-----------DC   70 (318)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEE-EC--CGG-----------GG
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEE-EC--CHH-----------Hh
Confidence            46999998 9999999999998885  79999999888877666665431   223222 22  111           23


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccC
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~  149 (226)
                      ..-|++|..+|.....+    .+.   .+.+..|..-...+.+.+..+ ..++.++++|-..
T Consensus        71 ~~aDvVii~ag~~~~~g----~~R---~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~tNPv  124 (318)
T 1ez4_A           71 KDADLVVITAGAPQKPG----ESR---LDLVNKNLNILSSIVKPVVDS-GFDGIFLVAANPV  124 (318)
T ss_dssp             TTCSEEEECCCC-----------------CHHHHHHHHHHHHHHHHHT-TCCSEEEECSSSH
T ss_pred             CCCCEEEECCCCCCCCC----CCH---HHHHHHHHHHHHHHHHHHHHh-CCCeEEEEeCCcH
Confidence            58999999999754211    112   234556655555555555444 3467788775443

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=96.77  E-value=0.0021  Score=53.64  Aligned_cols=47  Identities=23%  Similarity=0.355  Sum_probs=41.6

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHH
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKL   56 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~   56 (226)
                      +++||+++|.|. |.+|..+++.|.+.|++|++.+++.++++...+++
T Consensus       170 ~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~  216 (364)
T 1leh_A          170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE  216 (364)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             CCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence            689999999986 78999999999999999999999988777666654

>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36

Probab=96.76  E-value=0.009  Score=45.35  Aligned_cols=108  Identities=14%  Similarity=0.061  Sum_probs=71.6

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHh-------------cCCcEEEEEeeCCCHHHHH
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA-------------RGIEVIGVVCHVSNGQQRK   77 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-------------~~~~~~~~~~Dv~~~~~v~   77 (226)
                      .+++||-.|++.|.   .+..|+++|++|+.++.+++.++.+.+....             ...++.++.+|+.+...-+
T Consensus        22 ~~~~vLD~GCG~G~---~~~~la~~g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~   98 (203)
T 1pjz_A           22 PGARVLVPLCGKSQ---DMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARD   98 (203)
T ss_dssp             TTCEEEETTTCCSH---HHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHH
T ss_pred             CCCEEEEeCCCCcH---hHHHHHHCCCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCccc
Confidence            57899999988764   3455667799999999999988877765432             1356889999998764211


Q ss_pred             HHHHHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEecc
Q 027248           78 NLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (226)
Q Consensus        78 ~~~~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~  148 (226)
                               .+.+|+++.+.....       .+.++..           .+++.+...|+++|++++++..
T Consensus        99 ---------~~~fD~v~~~~~l~~-------l~~~~~~-----------~~l~~~~r~LkpgG~~~l~~~~  142 (203)
T 1pjz_A           99 ---------IGHCAAFYDRAAMIA-------LPADMRE-----------RYVQHLEALMPQACSGLLITLE  142 (203)
T ss_dssp             ---------HHSEEEEEEESCGGG-------SCHHHHH-----------HHHHHHHHHSCSEEEEEEEEES
T ss_pred             ---------CCCEEEEEECcchhh-------CCHHHHH-----------HHHHHHHHHcCCCcEEEEEEEe
Confidence                     138999997664422       2222222           2345666677778885555433

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=96.75  E-value=0.0038  Score=53.63  Aligned_cols=81  Identities=21%  Similarity=0.212  Sum_probs=55.5

Q ss_pred             cccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus         6 ~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      +..+++||+++|.|. |+.|.+.|+.|.++|++|...+++........+.+.+.+..+.  ...-  ++.   .      
T Consensus         3 ~~~~~~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~~--~g~~--~~~---~------   68 (451)
T 3lk7_A            3 TITTFENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVV--CGSH--PLE---L------   68 (451)
T ss_dssp             -CCTTTTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCEEE--ESCC--CGG---G------
T ss_pred             chhhcCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCEEE--ECCC--hHH---h------
Confidence            334678999999998 7899999999999999999999976433344455665554332  1111  111   1      


Q ss_pred             HhCC-CCEEEEcCCCCC
Q 027248           86 KFGK-IDVVVSNAAANP  101 (226)
Q Consensus        86 ~~~~-id~li~nag~~~  101 (226)
                       ... .|.+|.++|+..
T Consensus        69 -~~~~~d~vv~spgi~~   84 (451)
T 3lk7_A           69 -LDEDFCYMIKNPGIPY   84 (451)
T ss_dssp             -GGSCEEEEEECTTSCT
T ss_pred             -hcCCCCEEEECCcCCC
Confidence             124 899999998854

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=96.74  E-value=0.023  Score=46.25  Aligned_cols=112  Identities=16%  Similarity=0.178  Sum_probs=65.5

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhc----CCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKAR----GIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      ++|.|+|+ |.+|..++..|+..|. +|++.++++++++....++.+.    .....+...  ++.+           .+
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~-----------a~   68 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NNYA-----------DT   68 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGG-----------GG
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEEC--CCHH-----------HH
Confidence            45899998 9999999999999996 8999999998887655555432    112111111  1211           13


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEe
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~s  146 (226)
                      ...|++|..+|.....+    .+.   ......|..-...+.+.+..+- .++.++++|
T Consensus        69 ~~aD~Vi~a~g~p~~~g----~~r---~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~t  119 (309)
T 1ur5_A           69 ANSDVIVVTSGAPRKPG----MSR---EDLIKVNADITRACISQAAPLS-PNAVIIMVN  119 (309)
T ss_dssp             TTCSEEEECCCC---------------CHHHHHHHHHHHHHHHHHGGGC-TTCEEEECC
T ss_pred             CCCCEEEEcCCCCCCCC----CCH---HHHHHHHHHHHHHHHHHHHhhC-CCeEEEEcC
Confidence            47899999999754211    111   1234455544445555554442 345555544

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.74  E-value=0.0023  Score=51.34  Aligned_cols=42  Identities=29%  Similarity=0.339  Sum_probs=37.5

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcch
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN   48 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~   48 (226)
                      ..+++||+++|.|+++-+|+.++..|...|++|.++.|+...
T Consensus       155 ~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~~  196 (285)
T 3p2o_A          155 EIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKD  196 (285)
T ss_dssp             TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSC
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCchh
Confidence            356899999999999999999999999999999999886543

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=96.71  E-value=0.013  Score=48.20  Aligned_cols=80  Identities=14%  Similarity=0.075  Sum_probs=51.8

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCe-EEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      -.|++++|+|+ |++|...++.+...|++ ++.+++++++++.+ +   +.|.+..+   |..+.+.. +..+.+ ...+
T Consensus       159 ~~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a-~---~lGa~~~i---~~~~~~~~-~~~~~~-~~~~  228 (346)
T 4a2c_A          159 CENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLALA-K---SFGAMQTF---NSSEMSAP-QMQSVL-RELR  228 (346)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-H---HTTCSEEE---ETTTSCHH-HHHHHH-GGGC
T ss_pred             CCCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHHHHH-H---HcCCeEEE---eCCCCCHH-HHHHhh-cccC
Confidence            36899999987 89999999988899987 46777777665432 2   23444332   54443322 222222 2235


Q ss_pred             CCCEEEEcCCC
Q 027248           89 KIDVVVSNAAA   99 (226)
Q Consensus        89 ~id~li~nag~   99 (226)
                      ..|+++.+.|.
T Consensus       229 g~d~v~d~~G~  239 (346)
T 4a2c_A          229 FNQLILETAGV  239 (346)
T ss_dssp             SSEEEEECSCS
T ss_pred             Ccccccccccc
Confidence            78999988874

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=96.70  E-value=0.006  Score=49.91  Aligned_cols=88  Identities=15%  Similarity=0.140  Sum_probs=58.1

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHH-------HHhcCCcEEEEEeeCCCHHHHHHHHH-
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK-------LKARGIEVIGVVCHVSNGQQRKNLIN-   81 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~-------~~~~~~~~~~~~~Dv~~~~~v~~~~~-   81 (226)
                      ...++|.|.|. |.+|..+++.|++.|++|.+.+|++++.+.+.+.       ..+.-.+..++..=+.++..++.++. 
T Consensus        29 ~~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~  107 (320)
T 4dll_A           29 PYARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVVSMLENGAVVQDVLFA  107 (320)
T ss_dssp             CCCSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEECCSSHHHHHHHHTT
T ss_pred             cCCCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEEECCCHHHHHHHHcc
Confidence            34457888865 8999999999999999999999998877665432       11100112233345566677777776 


Q ss_pred             -HHHHHhCCCCEEEEcCC
Q 027248           82 -QTIEKFGKIDVVVSNAA   98 (226)
Q Consensus        82 -~~~~~~~~id~li~nag   98 (226)
                       .+.+...+-.++|+...
T Consensus       108 ~~~~~~l~~~~~vi~~st  125 (320)
T 4dll_A          108 QGVAAAMKPGSLFLDMAS  125 (320)
T ss_dssp             TCHHHHCCTTCEEEECSC
T ss_pred             hhHHhhCCCCCEEEecCC
Confidence             56555545556666654

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=96.68  E-value=0.0092  Score=52.85  Aligned_cols=89  Identities=9%  Similarity=0.053  Sum_probs=58.3

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCc-------------------chHHHHHHHHHhcCCcEEEEEe
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQ-------------------KNVDEAVVKLKARGIEVIGVVC   68 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~   68 (226)
                      .+++++|+|.|+ ||+|.++++.|+..|. ++.+++.+.                   .+.+.+.+.+.+..+.+.+...
T Consensus       323 kL~~arVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP~V~v~~~  401 (615)
T 4gsl_A          323 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV  401 (615)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCCCcEEEEe
Confidence            467889999986 6999999999999996 599999874                   4666777777776665544333


Q ss_pred             --eC-------CCHHHHHHHHHHHHHHhCCCCEEEEcCC
Q 027248           69 --HV-------SNGQQRKNLINQTIEKFGKIDVVVSNAA   98 (226)
Q Consensus        69 --Dv-------~~~~~v~~~~~~~~~~~~~id~li~nag   98 (226)
                        ++       ++++....-.+.+.+.+...|+||++..
T Consensus       402 ~~~Ipm~gh~v~~e~~~~l~~~~l~~ll~~~DlVvd~tD  440 (615)
T 4gsl_A          402 KLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVD  440 (615)
T ss_dssp             CCCCCCTTCCCSCHHHHHHHHHHHHHHHHHCSEEEECCS
T ss_pred             eccccccCccccchhhhcCCHHHHHHHhhcCCEEEecCC
Confidence              33       2221111111222233347899997764

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=96.66  E-value=0.0018  Score=53.07  Aligned_cols=100  Identities=20%  Similarity=0.201  Sum_probs=64.5

Q ss_pred             CC-EEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           12 GK-VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        12 gk-~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      |+ +++|+|++|++|...++.+...|++|+.+++++++++.+. ++   +.+..   .|..+.+  .+.+.++  ..+.+
T Consensus       150 g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~-~l---Ga~~v---~~~~~~~--~~~~~~~--~~~~~  218 (330)
T 1tt7_A          150 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLK-QL---GASEV---ISREDVY--DGTLKAL--SKQQW  218 (330)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHH-HH---TCSEE---EEHHHHC--SSCCCSS--CCCCE
T ss_pred             CCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc---CCcEE---EECCCch--HHHHHHh--hcCCc
Confidence            44 7999999999999999998889999999999988876543 33   33322   2322110  0001111  11368


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccC
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~  149 (226)
                      |++|+++|..            .               .+.++..++++|+++.++...
T Consensus       219 d~vid~~g~~------------~---------------~~~~~~~l~~~G~iv~~G~~~  250 (330)
T 1tt7_A          219 QGAVDPVGGK------------Q---------------LASLLSKIQYGGSVAVSGLTG  250 (330)
T ss_dssp             EEEEESCCTH------------H---------------HHHHHTTEEEEEEEEECCCSS
T ss_pred             cEEEECCcHH------------H---------------HHHHHHhhcCCCEEEEEecCC
Confidence            9999998730            0               224455566778888877543

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.65  E-value=0.0023  Score=54.40  Aligned_cols=72  Identities=13%  Similarity=0.081  Sum_probs=51.1

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCE
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~   92 (226)
                      ..++|.|. |-+|..+++.|.+.|.+|++++++++..+...+    .+  +.++.+|.++++.++.+      ...+.|+
T Consensus         5 ~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~----~g--~~vi~GDat~~~~L~~a------gi~~A~~   71 (413)
T 3l9w_A            5 MRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK----FG--MKVFYGDATRMDLLESA------GAAKAEV   71 (413)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH----TT--CCCEESCTTCHHHHHHT------TTTTCSE
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh----CC--CeEEEcCCCCHHHHHhc------CCCccCE
Confidence            45888986 789999999999999999999999987665542    22  33566777777755443      1125566


Q ss_pred             EEEcC
Q 027248           93 VVSNA   97 (226)
Q Consensus        93 li~na   97 (226)
                      +|.+.
T Consensus        72 viv~~   76 (413)
T 3l9w_A           72 LINAI   76 (413)
T ss_dssp             EEECC
T ss_pred             EEECC
Confidence            65444

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=96.62  E-value=0.0016  Score=53.31  Aligned_cols=85  Identities=20%  Similarity=0.112  Sum_probs=55.7

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      ..++.||+++|.|++.-+|+.+++.|+..|++|.+++|+..++.....++....  ........++++++++.+.     
T Consensus       172 g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~--~~~t~~~~t~~~~L~e~l~-----  244 (320)
T 1edz_A          172 GNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNK--HHVEDLGEYSEDLLKKCSL-----  244 (320)
T ss_dssp             TCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCC--CEEEEEEECCHHHHHHHHH-----
T ss_pred             CCCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhc--ccccccccccHhHHHHHhc-----
Confidence            347899999999999889999999999999999999887433211111111100  1111111244455555555     


Q ss_pred             hCCCCEEEEcCCCC
Q 027248           87 FGKIDVVVSNAAAN  100 (226)
Q Consensus        87 ~~~id~li~nag~~  100 (226)
                        .-|+||...|..
T Consensus       245 --~ADIVIsAtg~p  256 (320)
T 1edz_A          245 --DSDVVITGVPSE  256 (320)
T ss_dssp             --HCSEEEECCCCT
T ss_pred             --cCCEEEECCCCC
Confidence              789999888853

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=96.62  E-value=0.0011  Score=55.87  Aligned_cols=115  Identities=16%  Similarity=0.176  Sum_probs=69.2

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh--
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF--   87 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--   87 (226)
                      .|++++|+|+ |++|...++.....|+ +|+.+++++++++.+. +   .|.+  .  .|.++.+.   +.+++.+..  
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~-~---lGa~--~--i~~~~~~~---~~~~v~~~t~g  252 (398)
T 1kol_A          185 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAK-A---QGFE--I--ADLSLDTP---LHEQIAALLGE  252 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-H---TTCE--E--EETTSSSC---HHHHHHHHHSS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHH-H---cCCc--E--EccCCcch---HHHHHHHHhCC
Confidence            5889999995 9999999988888998 6889999887765442 2   3443  2  35554332   223333332  


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEecc
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~  148 (226)
                      ..+|++|.++|........ +..          |...+-...+.++..++++|+++.++..
T Consensus       253 ~g~Dvvid~~G~~~~~~~~-~~~----------~~~~~~~~~~~~~~~l~~~G~iv~~G~~  302 (398)
T 1kol_A          253 PEVDCAVDAVGFEARGHGH-EGA----------KHEAPATVLNSLMQVTRVAGKIGIPGLY  302 (398)
T ss_dssp             SCEEEEEECCCTTCBCSST-TGG----------GSBCTTHHHHHHHHHEEEEEEEEECSCC
T ss_pred             CCCCEEEECCCCccccccc-ccc----------cccchHHHHHHHHHHHhcCCEEEEeccc
Confidence            2699999999863200000 000          0000111234555666778899887754

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=96.62  E-value=0.032  Score=45.55  Aligned_cols=74  Identities=16%  Similarity=0.104  Sum_probs=51.7

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCC--eEEEEecCcchHHHHHHHHHhcCC----cEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKARGI----EVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      +++.|+|+ |.+|..++..|+..|.  +|++.++++++++....++.....    ++.+. .|  +.+           .
T Consensus         7 ~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~-~~--~~~-----------a   71 (316)
T 1ldn_A            7 ARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIW-HG--DYD-----------D   71 (316)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEE-EC--CGG-----------G
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEE-cC--cHH-----------H
Confidence            57999998 9999999999998874  799999998766654444443221    23332 12  111           1


Q ss_pred             hCCCCEEEEcCCCCC
Q 027248           87 FGKIDVVVSNAAANP  101 (226)
Q Consensus        87 ~~~id~li~nag~~~  101 (226)
                      +..-|++|..+|...
T Consensus        72 l~~aDvViia~~~~~   86 (316)
T 1ldn_A           72 CRDADLVVICAGANQ   86 (316)
T ss_dssp             TTTCSEEEECCSCCC
T ss_pred             hCCCCEEEEcCCCCC
Confidence            348899999999865

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=96.60  E-value=0.0044  Score=51.25  Aligned_cols=99  Identities=12%  Similarity=0.178  Sum_probs=58.2

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCC-CeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEG-ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      .|++++|+|++|++|...++.....| .+|+.++ +.++.+...     .+.+..   .| .+.+..+.+ .++  ..+.
T Consensus       142 ~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-----~ga~~~---~~-~~~~~~~~~-~~~--~~~g  208 (349)
T 4a27_A          142 EGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-----DSVTHL---FD-RNADYVQEV-KRI--SAEG  208 (349)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-----GGSSEE---EE-TTSCHHHHH-HHH--CTTC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-----cCCcEE---Ec-CCccHHHHH-HHh--cCCC
Confidence            58999999999999999888776665 6777776 444443322     233322   24 333322222 222  1247


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccC
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~  149 (226)
                      +|++|.+.|...                           ++.++..++++|+++.++...
T Consensus       209 ~Dvv~d~~g~~~---------------------------~~~~~~~l~~~G~~v~~G~~~  241 (349)
T 4a27_A          209 VDIVLDCLCGDN---------------------------TGKGLSLLKPLGTYILYGSSN  241 (349)
T ss_dssp             EEEEEEECC----------------------------------CTTEEEEEEEEEEC---
T ss_pred             ceEEEECCCchh---------------------------HHHHHHHhhcCCEEEEECCCc
Confidence            999999987421                           123456677789999887643

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=96.59  E-value=0.019  Score=46.85  Aligned_cols=113  Identities=14%  Similarity=0.057  Sum_probs=73.5

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCC--CeEEEEecCcchHHHHHHHHHhcC---CcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248           14 VAIVTASTQGIGFGIAERLGLEG--ASVVVSSRKQKNVDEAVVKLKARG---IEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      +|.|+|+ |.+|.+++..|+..+  .++++.++++++++....++....   .++.+. .|  +.+.           +.
T Consensus         2 KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~-~~--~~~a-----------~~   66 (310)
T 2xxj_A            2 KVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVW-AG--SYGD-----------LE   66 (310)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEE-EC--CGGG-----------GT
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEE-EC--CHHH-----------hC
Confidence            5889998 999999999999887  579999999888876666665431   222322 22  2221           34


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccC
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~  149 (226)
                      .-|++|..+|.....    ..+..   ..+..|..-...+.+.+..+ ..++.++++|-..
T Consensus        67 ~aD~Vii~ag~~~~~----g~~r~---dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~tNPv  119 (310)
T 2xxj_A           67 GARAVVLAAGVAQRP----GETRL---QLLDRNAQVFAQVVPRVLEA-APEAVLLVATNPV  119 (310)
T ss_dssp             TEEEEEECCCCCCCT----TCCHH---HHHHHHHHHHHHHHHHHHHH-CTTCEEEECSSSH
T ss_pred             CCCEEEECCCCCCCC----CcCHH---HHHHhhHHHHHHHHHHHHHH-CCCcEEEEecCch
Confidence            899999999975422    22333   23556655555555555544 3467788775543

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=96.58  E-value=0.0037  Score=52.74  Aligned_cols=78  Identities=18%  Similarity=0.217  Sum_probs=53.6

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh-C
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF-G   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-~   88 (226)
                      .|++++|+|+ |++|...++.+...|+ +|+.+++++++++.+.    +.+.+  +  .|..+.+..   .+++.+.. +
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~----~lGa~--~--i~~~~~~~~---~~~~~~~~~g  252 (398)
T 2dph_A          185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLLS----DAGFE--T--IDLRNSAPL---RDQIDQILGK  252 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH----TTTCE--E--EETTSSSCH---HHHHHHHHSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH----HcCCc--E--EcCCCcchH---HHHHHHHhCC
Confidence            5889999996 9999999888888899 8999999887765432    23432  2  365543321   22223222 2


Q ss_pred             -CCCEEEEcCCCC
Q 027248           89 -KIDVVVSNAAAN  100 (226)
Q Consensus        89 -~id~li~nag~~  100 (226)
                       .+|++|.++|..
T Consensus       253 ~g~Dvvid~~g~~  265 (398)
T 2dph_A          253 PEVDCGVDAVGFE  265 (398)
T ss_dssp             SCEEEEEECSCTT
T ss_pred             CCCCEEEECCCCc
Confidence             699999999853

>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*

Probab=96.57  E-value=0.0096  Score=47.03  Aligned_cols=108  Identities=12%  Similarity=0.063  Sum_probs=72.3

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHh------------------cCCcEEEEEeeCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA------------------RGIEVIGVVCHVSN   72 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~------------------~~~~~~~~~~Dv~~   72 (226)
                      .+.+||..|++.|.   .+..|++.|++|+.++.++..++.+.++...                  .+.++.++.+|+.+
T Consensus        68 ~~~~vLD~GCG~G~---~~~~La~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~  144 (252)
T 2gb4_A           68 SGLRVFFPLCGKAI---EMKWFADRGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFD  144 (252)
T ss_dssp             CSCEEEETTCTTCT---HHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTT
T ss_pred             CCCeEEEeCCCCcH---HHHHHHHCCCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcccc
Confidence            67899999987764   3466788899999999999888777554421                  23578899999987


Q ss_pred             HHHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEecc
Q 027248           73 GQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (226)
Q Consensus        73 ~~~v~~~~~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~  148 (226)
                      ...-         ..+.+|+++.+..... .      +.++.           -.+++.+...|+++|+++.++..
T Consensus       145 l~~~---------~~~~FD~V~~~~~l~~-l------~~~~~-----------~~~l~~~~~~LkpGG~l~l~~~~  193 (252)
T 2gb4_A          145 LPRA---------NIGKFDRIWDRGALVA-I------NPGDH-----------DRYADIILSLLRKEFQYLVAVLS  193 (252)
T ss_dssp             GGGG---------CCCCEEEEEESSSTTT-S------CGGGH-----------HHHHHHHHHTEEEEEEEEEEEEE
T ss_pred             CCcc---------cCCCEEEEEEhhhhhh-C------CHHHH-----------HHHHHHHHHHcCCCeEEEEEEEe
Confidence            5420         1158999998765433 1      11111           12345666677778887655433

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=96.55  E-value=0.0027  Score=52.24  Aligned_cols=71  Identities=6%  Similarity=-0.026  Sum_probs=52.9

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id   91 (226)
                      .+.++|.|+ |.+|+.++++|.++|. |++++++++..+ ..+      ....++.+|.++++.++++      ...+.|
T Consensus       115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~------~~~~~i~gd~~~~~~L~~a------~i~~a~  179 (336)
T 1lnq_A          115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VLR------SGANFVHGDPTRVSDLEKA------NVRGAR  179 (336)
T ss_dssp             -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH------TTCEEEESCTTSHHHHHHT------CSTTEE
T ss_pred             cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh------CCcEEEEeCCCCHHHHHhc------Chhhcc
Confidence            467999996 8999999999999999 999999998776 322      2466788899988876543      112566


Q ss_pred             EEEEcC
Q 027248           92 VVVSNA   97 (226)
Q Consensus        92 ~li~na   97 (226)
                      .+|...
T Consensus       180 ~vi~~~  185 (336)
T 1lnq_A          180 AVIVDL  185 (336)
T ss_dssp             EEEECC
T ss_pred             EEEEcC
Confidence            666543

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=96.55  E-value=0.003  Score=51.60  Aligned_cols=98  Identities=16%  Similarity=0.167  Sum_probs=65.7

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id   91 (226)
                      |+ ++|+|++|++|...++.+...|++|+.+++++++.+.+. ++   +.+..+   |..+.+.    ++++  ..+.+|
T Consensus       148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~-~l---Ga~~vi---~~~~~~~----~~~~--~~~~~d  213 (324)
T 3nx4_A          148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLK-SL---GANRIL---SRDEFAE----SRPL--EKQLWA  213 (324)
T ss_dssp             CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH-HH---TCSEEE---EGGGSSC----CCSS--CCCCEE
T ss_pred             Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hc---CCCEEE---ecCCHHH----HHhh--cCCCcc
Confidence            45 999999999999999999999999999999988876553 23   433322   3332221    1111  124789


Q ss_pred             EEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCC
Q 027248           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG  150 (226)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~  150 (226)
                      +++.+.|..                           ..+.++..++++|+++.++....
T Consensus       214 ~v~d~~g~~---------------------------~~~~~~~~l~~~G~iv~~G~~~~  245 (324)
T 3nx4_A          214 GAIDTVGDK---------------------------VLAKVLAQMNYGGCVAACGLAGG  245 (324)
T ss_dssp             EEEESSCHH---------------------------HHHHHHHTEEEEEEEEECCCTTC
T ss_pred             EEEECCCcH---------------------------HHHHHHHHHhcCCEEEEEecCCC
Confidence            999887620                           12344556677889998876543

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.53  E-value=0.0081  Score=48.21  Aligned_cols=85  Identities=13%  Similarity=0.064  Sum_probs=57.2

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHH-------HHhcCCcEEEEEeeCCCHHHHHHHH---HH
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK-------LKARGIEVIGVVCHVSNGQQRKNLI---NQ   82 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~-------~~~~~~~~~~~~~Dv~~~~~v~~~~---~~   82 (226)
                      +++.|.| .|.+|..+++.|++.|++|++.+|++++.+...+.       ..+.-.+..++..=+.++..++.++   +.
T Consensus         2 ~~i~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~   80 (287)
T 3pef_A            2 QKFGFIG-LGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGKHG   80 (287)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTC
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCcch
Confidence            4678887 48999999999999999999999999887765431       0000001223334556667778777   66


Q ss_pred             HHHHhCCCCEEEEcCC
Q 027248           83 TIEKFGKIDVVVSNAA   98 (226)
Q Consensus        83 ~~~~~~~id~li~nag   98 (226)
                      +.+...+=.++|+..+
T Consensus        81 l~~~l~~~~~vi~~st   96 (287)
T 3pef_A           81 VLEGIGEGRGYVDMST   96 (287)
T ss_dssp             HHHHCCTTCEEEECSC
T ss_pred             HhhcCCCCCEEEeCCC
Confidence            6665444456776644

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=96.53  E-value=0.014  Score=47.73  Aligned_cols=112  Identities=13%  Similarity=0.097  Sum_probs=68.7

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCCC--eEEEEecCcchHHHHHHHHHhc---CCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248           14 VAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKAR---GIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      ++.|+|+ |.+|.+++..|++.|.  +|++.++++++++.....+...   .....+. .  ++.+.           ..
T Consensus         2 kI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~-~--~d~~~-----------~~   66 (319)
T 1a5z_A            2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIY-A--GDYAD-----------LK   66 (319)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEE-E--CCGGG-----------GT
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEE-e--CCHHH-----------hC
Confidence            4788998 9999999999999998  9999999988777655444321   1111111 1  23221           23


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEecc
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~  148 (226)
                      ..|++|.+++.....    ..+..   .....|.--...+.+.+.++ .+++.++++|..
T Consensus        67 ~aDvViiav~~~~~~----g~~r~---dl~~~n~~i~~~i~~~i~~~-~~~~~ii~~tNp  118 (319)
T 1a5z_A           67 GSDVVIVAAGVPQKP----GETRL---QLLGRNARVMKEIARNVSKY-APDSIVIVVTNP  118 (319)
T ss_dssp             TCSEEEECCCCCCCS----SCCHH---HHHHHHHHHHHHHHHHHHHH-CTTCEEEECSSS
T ss_pred             CCCEEEEccCCCCCC----CCCHH---HHHHHHHHHHHHHHHHHHhh-CCCeEEEEeCCc
Confidence            789999999875411    11121   23455555555555555554 245666665443

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=96.53  E-value=0.0061  Score=48.68  Aligned_cols=40  Identities=15%  Similarity=0.213  Sum_probs=36.0

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchH
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNV   49 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~   49 (226)
                      ++||+++|.|+++-+|+.+++.|...|++|.++.|+...+
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t~~L  187 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKTKDI  187 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCH
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCcccH
Confidence            8999999999999999999999999999999998765433

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=96.50  E-value=0.0084  Score=47.46  Aligned_cols=87  Identities=15%  Similarity=0.117  Sum_probs=55.5

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCe-EEEEecCcchHHHHHHHHH--------hcCCcEEEEEeeCCCHHHHHHHHHH
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQKNVDEAVVKLK--------ARGIEVIGVVCHVSNGQQRKNLINQ   82 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~-v~~~~r~~~~~~~~~~~~~--------~~~~~~~~~~~Dv~~~~~v~~~~~~   82 (226)
                      +.++.|.|+ |.+|..+++.|.+.|++ |.+.+|++++.+...+++.        +.-.++.++. --..+..+++++++
T Consensus        10 ~m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi-~av~~~~~~~v~~~   87 (266)
T 3d1l_A           10 DTPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYI-VSLKDSAFAELLQG   87 (266)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEE-ECCCHHHHHHHHHH
T ss_pred             CCeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEE-EecCHHHHHHHHHH
Confidence            456888986 89999999999999998 8899999888776655421        1001111111 12334456777776


Q ss_pred             HHHHhCCCCEEEEcCCCC
Q 027248           83 TIEKFGKIDVVVSNAAAN  100 (226)
Q Consensus        83 ~~~~~~~id~li~nag~~  100 (226)
                      +.+....=.++|++.+..
T Consensus        88 l~~~~~~~~ivv~~s~~~  105 (266)
T 3d1l_A           88 IVEGKREEALMVHTAGSI  105 (266)
T ss_dssp             HHTTCCTTCEEEECCTTS
T ss_pred             HHhhcCCCcEEEECCCCC
Confidence            654332334677776543

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=96.50  E-value=0.048  Score=44.78  Aligned_cols=112  Identities=18%  Similarity=0.143  Sum_probs=66.7

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhc------CCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKAR------GIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      +++.|+|+ |.+|.+++..|+..|. +|++.++++++++.....+.+.      ..++.. ..|   .+           
T Consensus        15 ~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~-t~d---~~-----------   78 (328)
T 2hjr_A           15 KKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFG-ENN---YE-----------   78 (328)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEE-ESC---GG-----------
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEE-CCC---HH-----------
Confidence            57999998 9999999999999998 9999999998877543333221      112221 122   11           


Q ss_pred             HhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEecc
Q 027248           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~  148 (226)
                      .+..-|++|..+|.....+.    +..   .....|..-...+.+.+..+. .++.++++|-.
T Consensus        79 al~~aD~VI~avg~p~k~g~----tr~---dl~~~n~~i~~~i~~~i~~~~-p~a~viv~tNP  133 (328)
T 2hjr_A           79 YLQNSDVVIITAGVPRKPNM----TRS---DLLTVNAKIVGSVAENVGKYC-PNAFVICITNP  133 (328)
T ss_dssp             GGTTCSEEEECCSCCCCTTC----CSG---GGHHHHHHHHHHHHHHHHHHC-TTCEEEECCSS
T ss_pred             HHCCCCEEEEcCCCCCCCCC----chh---hHHhhhHHHHHHHHHHHHHHC-CCeEEEEecCc
Confidence            13488999999987542111    111   123344443444444444432 35566655543

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=96.49  E-value=0.048  Score=44.35  Aligned_cols=113  Identities=12%  Similarity=0.094  Sum_probs=70.5

Q ss_pred             EEEEEcCCCchhHHHHHHHHhC--CCeEEEEecCcchHHHHHHHHHhc----CCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248           14 VAIVTASTQGIGFGIAERLGLE--GASVVVSSRKQKNVDEAVVKLKAR----GIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      ++.|+|+ |.+|..++..|++.  |.+|++.++++++++....++...    .....+...  ++.+.           .
T Consensus         2 kI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t--~d~~~-----------l   67 (310)
T 1guz_A            2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYAD-----------T   67 (310)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGGG-----------G
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEEC--CCHHH-----------H
Confidence            4788998 99999999999985  789999999998877554333321    111111111  22211           2


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEecc
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~  148 (226)
                      ...|++|.+++....  +  ..+.   ...+..|..-...+.+.+.++ .+++.++.+|..
T Consensus        68 ~~aDvViiav~~p~~--~--g~~r---~dl~~~n~~i~~~i~~~i~~~-~~~~~viv~tNP  120 (310)
T 1guz_A           68 ANSDIVIITAGLPRK--P--GMTR---EDLLMKNAGIVKEVTDNIMKH-SKNPIIIVVSNP  120 (310)
T ss_dssp             TTCSEEEECCSCCCC--T--TCCH---HHHHHHHHHHHHHHHHHHHHH-CSSCEEEECCSS
T ss_pred             CCCCEEEEeCCCCCC--C--CCCH---HHHHHHHHHHHHHHHHHHHHh-CCCcEEEEEcCc
Confidence            478999999986431  1  1112   245556766666666666666 356677776543

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=96.48  E-value=0.0034  Score=54.18  Aligned_cols=70  Identities=19%  Similarity=0.167  Sum_probs=54.6

Q ss_pred             EEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCEEE
Q 027248           15 AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVV   94 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~li   94 (226)
                      ++|.|+ |.+|+.+++.|.++|++|++++++++.++.+.+++     .+.++.+|-++++.++++=      ...-|++|
T Consensus         6 iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~-----~~~~i~Gd~~~~~~L~~Ag------i~~ad~~i   73 (461)
T 4g65_A            6 IIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY-----DLRVVNGHASHPDVLHEAG------AQDADMLV   73 (461)
T ss_dssp             EEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS-----SCEEEESCTTCHHHHHHHT------TTTCSEEE
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc-----CcEEEEEcCCCHHHHHhcC------CCcCCEEE
Confidence            777776 68999999999999999999999998887765544     4667888999988765541      13677777


Q ss_pred             Ec
Q 027248           95 SN   96 (226)
Q Consensus        95 ~n   96 (226)
                      ..
T Consensus        74 a~   75 (461)
T 4g65_A           74 AV   75 (461)
T ss_dssp             EC
T ss_pred             EE
Confidence            43

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=96.46  E-value=0.06  Score=42.99  Aligned_cols=159  Identities=14%  Similarity=0.193  Sum_probs=91.5

Q ss_pred             EEEEEcCCCchhHHHHHHHHh-CCCeEE-EEecCcchH--HHH----------------HHHHHhcCCcEEEEEeeCCCH
Q 027248           14 VAIVTASTQGIGFGIAERLGL-EGASVV-VSSRKQKNV--DEA----------------VVKLKARGIEVIGVVCHVSNG   73 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~-~g~~v~-~~~r~~~~~--~~~----------------~~~~~~~~~~~~~~~~Dv~~~   73 (226)
                      +++|+|++|.+|+.+++.+.+ .|++|+ +++++.++.  ...                .+++.. ..++   ..|++.+
T Consensus         7 kV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~-~~Dv---VIDft~p   82 (273)
T 1dih_A            7 RVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKD-DFDV---FIDFTRP   82 (273)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTT-SCSE---EEECSCH
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHhc-CCCE---EEEcCCh
Confidence            599999999999999999885 467766 566654321  000                011111 2333   3499999


Q ss_pred             HHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHH-------------HHHHHHHHHHHHHHHhhhhhcCC
Q 027248           74 QQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKL-------------WDINVKSSILLLQDAAPHLQKGS  140 (226)
Q Consensus        74 ~~v~~~~~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~-------------~~~N~~~~~~~~~~~~~~l~~~~  140 (226)
                      +.....+....+.  .+++++-+.|...       ...+.+.+.             +.+|+  .+.+++.+.+.|.++-
T Consensus        83 ~~~~~~~~~a~~~--G~~vVigTtG~~~-------e~~~~L~~~a~~~~vv~a~N~siGvn~--~~~l~~~aa~~~~~~~  151 (273)
T 1dih_A           83 EGTLNHLAFCRQH--GKGMVIGTTGFDE-------AGKQAIRDAAADIAIVFAANFSVGVNV--MLKLLEKAAKVMGDYT  151 (273)
T ss_dssp             HHHHHHHHHHHHT--TCEEEECCCCCCH-------HHHHHHHHHTTTSCEEECSCCCHHHHH--HHHHHHHHHHHHTTTS
T ss_pred             HHHHHHHHHHHhC--CCCEEEECCCCCH-------HHHHHHHHhcCCCCEEEEecCcHHHHH--HHHHHHHHHHhcCCCC
Confidence            9988888877776  7778887776421       111222221             11222  3444455555553221


Q ss_pred             EEEEEeccCCcCCCCCCchhhHhHHHHHHHHHHHHHHh---------------CC-CeEEEEEecC
Q 027248          141 SVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEM---------------AP-DTRVNCVAPG  190 (226)
Q Consensus       141 ~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~---------------~~-~i~v~~v~Pg  190 (226)
                      .|=.+=.   .+...-..+|+.++.-.+.+.+.+...+               .+ +|.+.++.-|
T Consensus       152 dieiiE~---Hh~~K~DaPSGTA~~~ae~i~~~~~~~~~~~~~~~r~~~~~~r~~~~i~i~s~R~g  214 (273)
T 1dih_A          152 DIEIIEA---HHRHKVDAPSGTALAMGEAIAHALDKDLKDCAVYSREGHTGERVPGTIGFATVRAG  214 (273)
T ss_dssp             EEEEEEE---ECTTCCSSSCHHHHHHHHHHHHHTTCCGGGTEECCCCSCCCSCCTTCEEEEEEECT
T ss_pred             CEEEEEe---ecCCCCCCCCHHHHHHHHHHHHhhCCCccccccccccCccCCCCCCcceEEEEeCC
Confidence            2211111   2233445678999998888877665431               13 6888888843

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=96.45  E-value=0.012  Score=47.55  Aligned_cols=85  Identities=9%  Similarity=0.001  Sum_probs=58.9

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHH-------HHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK-------LKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~-------~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      +++.|.| .|.+|..+++.|++.|++|++.+|++++.+.+.+.       ..+... ..++..=+.++..++.+++.+.+
T Consensus        16 ~~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~~vp~~~~~~~v~~~l~~   93 (296)
T 3qha_A           16 LKLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAA-ADLIHITVLDDAQVREVVGELAG   93 (296)
T ss_dssp             CCEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEECCSSHHHHHHHHHHHHT
T ss_pred             CeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEEECCChHHHHHHHHHHHH
Confidence            4577787 68999999999999999999999999887765432       111111 23344456677778888877766


Q ss_pred             HhCCCCEEEEcCCC
Q 027248           86 KFGKIDVVVSNAAA   99 (226)
Q Consensus        86 ~~~~id~li~nag~   99 (226)
                      ...+-.++|+...+
T Consensus        94 ~l~~g~ivv~~st~  107 (296)
T 3qha_A           94 HAKPGTVIAIHSTI  107 (296)
T ss_dssp             TCCTTCEEEECSCC
T ss_pred             hcCCCCEEEEeCCC
Confidence            54444567766543

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=96.44  E-value=0.0059  Score=49.03  Aligned_cols=41  Identities=27%  Similarity=0.353  Sum_probs=36.8

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcch
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN   48 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~   48 (226)
                      .+++||+++|.|.++-+|+.++..|...|++|.++.++...
T Consensus       157 i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T~~  197 (286)
T 4a5o_A          157 ADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTRD  197 (286)
T ss_dssp             CCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTCSC
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCCcC
Confidence            56899999999999999999999999999999998876543

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=96.43  E-value=0.05  Score=41.21  Aligned_cols=98  Identities=11%  Similarity=0.184  Sum_probs=67.3

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCC--cEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI--EVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      .+++++-.|++.|.   ++..+++.+.+|+.++.+++.++.+.+.....+.  ++.++..|+.+.-          ...+
T Consensus        55 ~~~~vLDlGcG~G~---~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~----------~~~~  121 (204)
T 3njr_A           55 RGELLWDIGGGSGS---VSVEWCLAGGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAAL----------ADLP  121 (204)
T ss_dssp             TTCEEEEETCTTCH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGG----------TTSC
T ss_pred             CCCEEEEecCCCCH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhc----------ccCC
Confidence            47789999987653   3344445588999999999988888777766553  5888888986521          1124


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEe
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~s  146 (226)
                      .+|+++.+.+.          .              .- +++.+...++++|++++.+
T Consensus       122 ~~D~v~~~~~~----------~--------------~~-~l~~~~~~LkpgG~lv~~~  154 (204)
T 3njr_A          122 LPEAVFIGGGG----------S--------------QA-LYDRLWEWLAPGTRIVANA  154 (204)
T ss_dssp             CCSEEEECSCC----------C--------------HH-HHHHHHHHSCTTCEEEEEE
T ss_pred             CCCEEEECCcc----------c--------------HH-HHHHHHHhcCCCcEEEEEe
Confidence            79999976632          0              11 3556666677788887655

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=96.38  E-value=0.024  Score=43.32  Aligned_cols=77  Identities=18%  Similarity=0.179  Sum_probs=51.4

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      ..+..+++.|.| .|.+|.++++.|++.|++|.+.+|+++         .....++.++  -+- ...++.+++++....
T Consensus        15 ~~~~~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~~---------~~~~aD~vi~--av~-~~~~~~v~~~l~~~~   81 (209)
T 2raf_A           15 LYFQGMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKDQ---------ATTLGEIVIM--AVP-YPALAALAKQYATQL   81 (209)
T ss_dssp             -----CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTCC---------CSSCCSEEEE--CSC-HHHHHHHHHHTHHHH
T ss_pred             cccCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHH---------HhccCCEEEE--cCC-cHHHHHHHHHHHHhc
Confidence            345677899999 799999999999999999999999876         1112344443  333 667778888776555


Q ss_pred             CCCCEEEEcCC
Q 027248           88 GKIDVVVSNAA   98 (226)
Q Consensus        88 ~~id~li~nag   98 (226)
                      . =.++|+.+.
T Consensus        82 ~-~~~vi~~~~   91 (209)
T 2raf_A           82 K-GKIVVDITN   91 (209)
T ss_dssp             T-TSEEEECCC
T ss_pred             C-CCEEEEECC
Confidence            4 235665543

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}

Probab=96.38  E-value=0.042  Score=44.72  Aligned_cols=112  Identities=14%  Similarity=0.195  Sum_probs=69.3

Q ss_pred             EEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhc----CCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           15 AIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKAR----GIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      +.|+|+ |.+|..++..|+..|. +|++.++++++++....++...    .....+...  .+.+           .+..
T Consensus         2 I~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~-----------a~~~   67 (308)
T 2d4a_B            2 ITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGS--NSYE-----------DMRG   67 (308)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE--SCGG-----------GGTT
T ss_pred             EEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEEC--CCHH-----------HhCC
Confidence            778998 9999999999998887 6999999998887655555432    222222221  1111           1348


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEecc
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~  148 (226)
                      .|++|..+|.....+    .+..   ..+..|..-...+.+.+..+ ..++.++++|-.
T Consensus        68 aD~Vi~~ag~~~k~G----~~r~---dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~tNP  118 (308)
T 2d4a_B           68 SDIVLVTAGIGRKPG----MTRE---QLLEANANTMADLAEKIKAY-AKDAIVVITTNP  118 (308)
T ss_dssp             CSEEEECCSCCCCSS----CCTH---HHHHHHHHHHHHHHHHHHHH-CTTCEEEECCSS
T ss_pred             CCEEEEeCCCCCCCC----CcHH---HHHHHHHHHHHHHHHHHHHH-CCCeEEEEeCCc
Confidence            999999999764222    2332   23455554444444444443 245677777543

>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}

Probab=96.37  E-value=0.007  Score=48.92  Aligned_cols=94  Identities=15%  Similarity=0.161  Sum_probs=63.1

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      .+.||++.|.|. |.||+++++.|...|++|+..+|+.+..+.           ..    ...   +.+++++       
T Consensus       119 ~l~g~tvGIIGl-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~-----------~~----~~~---~l~ell~-------  172 (290)
T 3gvx_A          119 LLYGKALGILGY-GGIGRRVAHLAKAFGMRVIAYTRSSVDQNV-----------DV----ISE---SPADLFR-------  172 (290)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSCCCTTC-----------SE----ECS---SHHHHHH-------
T ss_pred             eeecchheeecc-CchhHHHHHHHHhhCcEEEEEecccccccc-----------cc----ccC---ChHHHhh-------
Confidence            578999999974 899999999999999999999998765321           00    111   2333333       


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccC
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~  149 (226)
                      .-|+++...........+  +                   ....++.|+++..+|++|...
T Consensus       173 ~aDiV~l~~P~t~~t~~l--i-------------------~~~~l~~mk~gailIN~aRG~  212 (290)
T 3gvx_A          173 QSDFVLIAIPLTDKTRGM--V-------------------NSRLLANARKNLTIVNVARAD  212 (290)
T ss_dssp             HCSEEEECCCCCTTTTTC--B-------------------SHHHHTTCCTTCEEEECSCGG
T ss_pred             ccCeEEEEeeccccchhh--h-------------------hHHHHhhhhcCceEEEeehhc
Confidence            678988777643211111  1                   134456777778888887654

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=96.36  E-value=0.0057  Score=49.08  Aligned_cols=40  Identities=20%  Similarity=0.233  Sum_probs=36.0

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCc
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ   46 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~   46 (226)
                      ..+++||+++|.|+++-+|+.++..|...|++|.++.|+.
T Consensus       156 ~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t  195 (285)
T 3l07_A          156 GIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFT  195 (285)
T ss_dssp             TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             CCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc
Confidence            3568999999999999999999999999999998887754

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=96.35  E-value=0.088  Score=42.52  Aligned_cols=112  Identities=9%  Similarity=-0.043  Sum_probs=68.6

Q ss_pred             EEEEcCCCchhHHHHHHHHhCC--CeEEEEecCcchHHHHHHHHHhc----CCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248           15 AIVTASTQGIGFGIAERLGLEG--ASVVVSSRKQKNVDEAVVKLKAR----GIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      |.|+|+ |+||..++..|+.++  .++++.+.++++.+....++.+.    .....+...+  +.+           ...
T Consensus         3 V~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~--d~~-----------~~~   68 (294)
T 2x0j_A            3 LGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGA--DYS-----------LLK   68 (294)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEES--CGG-----------GGT
T ss_pred             EEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCC--CHH-----------HhC
Confidence            677895 999999999999887  36999999987776666556542    2223333221  111           134


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEecc
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~  148 (226)
                      .-|++|..||.....    ..+.+   +.++.|..=.-.+.+.+..+ ..++.++.+|..
T Consensus        69 ~aDvVvitAG~prkp----GmtR~---dLl~~Na~I~~~i~~~i~~~-~p~aivlvvsNP  120 (294)
T 2x0j_A           69 GSEIIVVTAGLARKP----GMTRL---DLAHKNAGIIKDIAKKIVEN-APESKILVVTNP  120 (294)
T ss_dssp             TCSEEEECCCCCCCS----SSCHH---HHHHHHHHHHHHHHHHHHTT-STTCEEEECSSS
T ss_pred             CCCEEEEecCCCCCC----CCchH---HHHHHHHHHHHHHHHHHHhc-CCceEEEEecCc
Confidence            789999999986532    23443   34566765444444444333 224556665544

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=96.34  E-value=0.035  Score=44.42  Aligned_cols=84  Identities=17%  Similarity=0.084  Sum_probs=58.3

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCC---eEEEEecCcchHHHHHHHHH----------hcCCcEEEEEeeCCCHHHHHHH
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGA---SVVVSSRKQKNVDEAVVKLK----------ARGIEVIGVVCHVSNGQQRKNL   79 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~---~v~~~~r~~~~~~~~~~~~~----------~~~~~~~~~~~Dv~~~~~v~~~   79 (226)
                      +++.|.|+ |.+|.++++.|.+.|+   +|.+.+|++++++...+++.          -...++.++-+   .++.++++
T Consensus         4 ~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav---~p~~~~~v   79 (280)
T 3tri_A            4 SNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAV---KPHQIKMV   79 (280)
T ss_dssp             SCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECS---CGGGHHHH
T ss_pred             CEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEe---CHHHHHHH
Confidence            45788877 8999999999999998   89999999988877665321          01233433322   45667788


Q ss_pred             HHHHHHH-hCCCCEEEEcCCCC
Q 027248           80 INQTIEK-FGKIDVVVSNAAAN  100 (226)
Q Consensus        80 ~~~~~~~-~~~id~li~nag~~  100 (226)
                      ++++... ...=.++|++++..
T Consensus        80 l~~l~~~~l~~~~iiiS~~agi  101 (280)
T 3tri_A           80 CEELKDILSETKILVISLAVGV  101 (280)
T ss_dssp             HHHHHHHHHTTTCEEEECCTTC
T ss_pred             HHHHHhhccCCCeEEEEecCCC
Confidence            8887765 43323788776543

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=96.33  E-value=0.0075  Score=48.76  Aligned_cols=41  Identities=24%  Similarity=0.271  Sum_probs=36.7

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcc
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK   47 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~   47 (226)
                      ..+++||+++|.|.++-+|+.++..|...|++|.++.|+..
T Consensus       160 ~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~  200 (300)
T 4a26_A          160 GIEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTS  200 (300)
T ss_dssp             TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSC
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCC
Confidence            35689999999999999999999999999999999988543

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=96.33  E-value=0.006  Score=50.73  Aligned_cols=80  Identities=16%  Similarity=0.272  Sum_probs=56.7

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCc-------------------chHHHHHHHHHhcCCc--EEEE
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQ-------------------KNVDEAVVKLKARGIE--VIGV   66 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~~~~~~~~--~~~~   66 (226)
                      .+++++|+|.|+ ||+|.++++.|+..|. ++.+++++.                   .+.+.+.+.+.+..+.  +..+
T Consensus       115 ~L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~  193 (353)
T 3h5n_A          115 KLKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEI  193 (353)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEe
Confidence            356789999987 7999999999999996 599998873                   3555666666665554  4555


Q ss_pred             EeeCCCHHHHHHHHHHHHHHhCCCCEEEEcC
Q 027248           67 VCHVSNGQQRKNLINQTIEKFGKIDVVVSNA   97 (226)
Q Consensus        67 ~~Dv~~~~~v~~~~~~~~~~~~~id~li~na   97 (226)
                      ..+++....+.       + +...|++|.+.
T Consensus       194 ~~~i~~~~~~~-------~-~~~~DlVvd~~  216 (353)
T 3h5n_A          194 ALNINDYTDLH-------K-VPEADIWVVSA  216 (353)
T ss_dssp             ECCCCSGGGGG-------G-SCCCSEEEECC
T ss_pred             ecccCchhhhh-------H-hccCCEEEEec
Confidence            55666554222       1 35889988765

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=96.31  E-value=0.0034  Score=50.30  Aligned_cols=72  Identities=21%  Similarity=0.302  Sum_probs=51.3

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      +++|++++|.|+ |++|+++++.|.+.|++|.+.+|+.++.+.+.+++   +  +     ++.+  +.++.       ..
T Consensus       126 ~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~---g--~-----~~~~--~~~~~-------~~  185 (275)
T 2hk9_A          126 EVKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKF---P--L-----EVVN--SPEEV-------ID  185 (275)
T ss_dssp             TGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTS---C--E-----EECS--CGGGT-------GG
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHc---C--C-----eeeh--hHHhh-------hc
Confidence            567899999996 79999999999999999999999987665544322   1  2     1221  11111       23


Q ss_pred             CCCEEEEcCCCC
Q 027248           89 KIDVVVSNAAAN  100 (226)
Q Consensus        89 ~id~li~nag~~  100 (226)
                      ..|++|++....
T Consensus       186 ~aDiVi~atp~~  197 (275)
T 2hk9_A          186 KVQVIVNTTSVG  197 (275)
T ss_dssp             GCSEEEECSSTT
T ss_pred             CCCEEEEeCCCC
Confidence            789999988754

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=96.30  E-value=0.0094  Score=47.89  Aligned_cols=44  Identities=25%  Similarity=0.275  Sum_probs=38.5

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVD   50 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~   50 (226)
                      ..+++||+++|.|++.-+|+.+++.|...|++|.++.++...+.
T Consensus       154 ~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~  197 (288)
T 1b0a_A          154 NIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLR  197 (288)
T ss_dssp             TCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHH
T ss_pred             CCCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCchhHH
Confidence            34689999999999999999999999999999999987765443

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=96.27  E-value=0.0096  Score=48.37  Aligned_cols=92  Identities=11%  Similarity=0.030  Sum_probs=57.8

Q ss_pred             cccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHH-------hcCCcEEEEEeeCCCHHHHHH
Q 027248            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLK-------ARGIEVIGVVCHVSNGQQRKN   78 (226)
Q Consensus         6 ~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~-------~~~~~~~~~~~Dv~~~~~v~~   78 (226)
                      |......+++.|.| .|.+|.++++.|++.|++|++.+|++++.+.+.+.-.       +.-.+..++..=+.++..++.
T Consensus         3 m~~~~~~~~IgiIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~   81 (306)
T 3l6d_A            3 LSDESFEFDVSVIG-LGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAAGAHLCESVKAALSASPATIFVLLDNHATHE   81 (306)
T ss_dssp             CCCCCCSCSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTCEECSSHHHHHHHSSEEEECCSSHHHHHH
T ss_pred             CCcccCCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEeCCHHHHHH
Confidence            33344456788886 6899999999999999999999999987766543210       000012233345566666777


Q ss_pred             HHH--HHHHHhCCCCEEEEcCCC
Q 027248           79 LIN--QTIEKFGKIDVVVSNAAA   99 (226)
Q Consensus        79 ~~~--~~~~~~~~id~li~nag~   99 (226)
                      ++.  .+.. ..+-.++|+...+
T Consensus        82 v~~~~~l~~-~~~g~ivid~st~  103 (306)
T 3l6d_A           82 VLGMPGVAR-ALAHRTIVDYTTN  103 (306)
T ss_dssp             HHTSTTHHH-HTTTCEEEECCCC
T ss_pred             Hhcccchhh-ccCCCEEEECCCC
Confidence            665  4432 2344466666543

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=96.26  E-value=0.075  Score=43.49  Aligned_cols=75  Identities=13%  Similarity=0.016  Sum_probs=51.8

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhc----CCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKAR----GIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      ++|.|+|+ |.+|..++..|+..|. +|++.++++++++.....+...    .....+...  ++.+           .+
T Consensus         5 ~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t--~d~~-----------al   70 (322)
T 1t2d_A            5 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGS--NTYD-----------DL   70 (322)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEE--CCGG-----------GG
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEEC--CCHH-----------Hh
Confidence            46888998 9999999999999997 8999999998887655444321    111111110  1211           13


Q ss_pred             CCCCEEEEcCCCCC
Q 027248           88 GKIDVVVSNAAANP  101 (226)
Q Consensus        88 ~~id~li~nag~~~  101 (226)
                      ..-|++|..+|...
T Consensus        71 ~~aD~Vi~a~g~p~   84 (322)
T 1t2d_A           71 AGADVVIVTAGFTK   84 (322)
T ss_dssp             TTCSEEEECCSCSS
T ss_pred             CCCCEEEEeCCCCC
Confidence            48899999998753

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=96.24  E-value=0.0062  Score=51.00  Aligned_cols=75  Identities=17%  Similarity=0.107  Sum_probs=53.5

Q ss_pred             cccccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHH
Q 027248            4 MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQT   83 (226)
Q Consensus         4 ~~~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   83 (226)
                      |+++..+.+|+++|.|+ |.+|+.+++.+.+.|++|++++.+++....   .+    .+ ..+..|..|.+.+.++++  
T Consensus         4 ~~~~~~~~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~p~~---~~----ad-~~~~~~~~d~~~l~~~~~--   72 (377)
T 3orq_A            4 MNFNKLKFGATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDCPCR---YV----AH-EFIQAKYDDEKALNQLGQ--   72 (377)
T ss_dssp             SSCCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTTG---GG----SS-EEEECCTTCHHHHHHHHH--
T ss_pred             cccccCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChhh---hh----CC-EEEECCCCCHHHHHHHHH--
Confidence            34444567899999985 579999999999999999999887653211   01    11 245678999888777765  


Q ss_pred             HHHhCCCCEEE
Q 027248           84 IEKFGKIDVVV   94 (226)
Q Consensus        84 ~~~~~~id~li   94 (226)
                           .+|+++
T Consensus        73 -----~~dvi~   78 (377)
T 3orq_A           73 -----KCDVIT   78 (377)
T ss_dssp             -----HCSEEE
T ss_pred             -----hCCcce
Confidence                 367764

>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}

Probab=96.24  E-value=0.11  Score=35.15  Aligned_cols=80  Identities=23%  Similarity=0.329  Sum_probs=64.1

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcch--HHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN--VDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      ...++.....-|=..+++.+.++|.+|+++..+++.  ..+..+++..+|.++.    -+.+.+....-+..+.++|+.+
T Consensus         3 qifvvfssdpeilkeivreikrqgvrvvllysdqdekrrrerleefekqgvdvr----tvedkedfrenireiwerypql   78 (162)
T 2l82_A            3 QIFVVFSSDPEILKEIVREIKRQGVRVVLLYSDQDEKRRRERLEEFEKQGVDVR----TVEDKEDFRENIREIWERYPQL   78 (162)
T ss_dssp             EEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCSCHHHHHHHHHHHHTTTCEEE----ECCSHHHHHHHHHHHHHHCTTC
T ss_pred             eEEEEecCCHHHHHHHHHHHHhCCeEEEEEecCchHHHHHHHHHHHHHcCCcee----eeccHHHHHHHHHHHHHhCCCC
Confidence            346777778888999999999999999999887653  3455677777776654    4678888888899999999999


Q ss_pred             CEEEEc
Q 027248           91 DVVVSN   96 (226)
Q Consensus        91 d~li~n   96 (226)
                      |+++..
T Consensus        79 dvvviv   84 (162)
T 2l82_A           79 DVVVIV   84 (162)
T ss_dssp             CEEEEE
T ss_pred             cEEEEE
Confidence            998743

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	226
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	3e-49
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	1e-48
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	6e-48
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	7e-48
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	2e-47
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	6e-47
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	1e-45
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	3e-45
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	5e-44
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	2e-43
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	2e-43
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	5e-43
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	5e-43
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	3e-42
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	4e-41
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	7e-41
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	2e-40
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	2e-40
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	3e-40
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	4e-40
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	7e-40
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	2e-39
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	3e-39
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	3e-39
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	4e-39
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	1e-38
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	1e-38
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	2e-38
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	3e-38
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	6e-38
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	5e-37
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	7e-37
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	7e-37
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	1e-36
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	4e-36
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	4e-35
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	6e-35
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	1e-34
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	1e-34
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	1e-34
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	2e-33
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	2e-33
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	8e-33
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	3e-32
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	4e-32
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	5e-32
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	9e-32
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	8e-31
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	1e-30
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	1e-30
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	3e-30
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	3e-30
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	4e-30
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	4e-30
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	1e-29
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	7e-29
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	3e-28
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-27
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	8e-23
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	1e-20
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	9e-16
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-15
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	1e-14
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	8e-14
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	9e-13
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	6e-12
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	6e-11
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	6e-11
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	2e-05
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	0.002

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  159 bits (404), Expect = 3e-49
 Identities = 62/199 (31%), Positives = 103/199 (51%), Gaps = 6/199 (3%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
           R+ GKV +VT   +GIG GI       GA VV+  + +         L+      + ++C
Sbjct: 3   RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDE----SGGRALEQELPGAVFILC 58

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
            V+     K L+++TI +FG++D VV+NA  +P      +T      +L ++N+  +  L
Sbjct: 59  DVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTL 118

Query: 129 LQDAAPHLQKGS-SVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RVNC 186
            + A P+L+K   +V+ ISS+ G   Q+    Y  TK A+  +TKALA + +P   RVNC
Sbjct: 119 TKLALPYLRKSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNC 178

Query: 187 VAPGFVPTHFAEYITSNDG 205
           ++PG + T   E + +   
Sbjct: 179 ISPGNIWTPLWEELAALMP 197

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  158 bits (400), Expect = 1e-48
 Identities = 61/205 (29%), Positives = 99/205 (48%), Gaps = 9/205 (4%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIE---VIG 65
           RF  KVAI+T S+ GIG   A     EGA V ++ R  + ++E   ++ A G+    V  
Sbjct: 2   RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNS 61

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAA---NPSVDSILQTKESVLDKLWDINV 122
           VV  V+    +  +++ T+ KFGK+D++V+NA A   +    +         D   ++N+
Sbjct: 62  VVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNL 121

Query: 123 KSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP 180
           +S I L + A PHL   KG  V + S  +G         Y + K A+   T+  A ++  
Sbjct: 122 RSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQ 181

Query: 181 D-TRVNCVAPGFVPTHFAEYITSND 204
              RVN ++PG V T F   +   +
Sbjct: 182 HGIRVNSISPGLVATGFGSAMGMPE 206

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score =  156 bits (395), Expect = 6e-48
 Identities = 52/193 (26%), Positives = 92/193 (47%), Gaps = 10/193 (5%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
            F GK  +VT   +GIG  IA+    EGA V +   + +  +       A  I       
Sbjct: 2   LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEV------AEAIGGAFFQV 55

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
            + + ++R   + +     G++DV+V+NAA      S L  +     ++ ++N+ + + L
Sbjct: 56  DLEDERERVRFVEEAAYALGRVDVLVNNAAIAAP-GSALTVRLPEWRRVLEVNLTAPMHL 114

Query: 129 LQDAAPHLQKG--SSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RVN 185
              AA  ++K    ++V ++S+ G   +   A Y  +K  L+ LT++LA ++AP   RVN
Sbjct: 115 SALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVN 174

Query: 186 CVAPGFVPTHFAE 198
            VAPG + T    
Sbjct: 175 AVAPGAIATEAVL 187

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  155 bits (393), Expect = 7e-48
 Identities = 43/197 (21%), Positives = 84/197 (42%), Gaps = 7/197 (3%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
           K   G++ ++T +  GIG   A       + +V+    +  ++E   K K  G +V   V
Sbjct: 3   KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFV 62

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
              SN +   +   +   + G + ++V N A       +  T++  ++K +++NV +   
Sbjct: 63  VDCSNREDIYSSAKKVKAEIGDVSILV-NNAGVVYTSDLFATQDPQIEKTFEVNVLAHFW 121

Query: 128 LLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT--- 182
             +   P +       +V ++S AG+     +  Y  +K A +G  K L  E+A      
Sbjct: 122 TTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITG 181

Query: 183 -RVNCVAPGFVPTHFAE 198
            +  C+ P FV T F +
Sbjct: 182 VKTTCLCPNFVNTGFIK 198

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score =  155 bits (392), Expect = 2e-47
 Identities = 56/193 (29%), Positives = 91/193 (47%), Gaps = 6/193 (3%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
           R + K+A++T    GIG  IAER  +EGA + ++        EA   ++  G  V+ V C
Sbjct: 2   RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPA--PEAEAAIRNLGRRVLTVKC 59

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
            VS     +    Q I  FG+ D++V+NA   P +    +       K ++INV S  L+
Sbjct: 60  DVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIP-FDELTFEQWKKTFEINVDSGFLM 118

Query: 129 LQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVN 185
            +   P +       ++ ++S   +    +   Y  TK A +G T+ALA+++  D   VN
Sbjct: 119 AKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITVN 178

Query: 186 CVAPGFVPTHFAE 198
            +AP  V T   E
Sbjct: 179 AIAPSLVRTATTE 191

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  153 bits (389), Expect = 6e-47
 Identities = 52/208 (25%), Positives = 104/208 (50%), Gaps = 12/208 (5%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI--EVIG 65
           +R++ ++A+VT ++ GIG  +A  L  +G  VV  +R   N++E   + K+ G    +I 
Sbjct: 6   ERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIP 65

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSS 125
             C +SN +   ++ +    +   +D+ ++NA      D++L    S    ++++NV + 
Sbjct: 66  YRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLAR-PDTLLSGSTSGWKDMFNVNVLAL 124

Query: 126 ILLLQDAAPHLQK----GSSVVLISSIAGYQ--PQSSMAMYGVTKTALLGLTKALAAEMA 179
            +  ++A   +++       ++ I+S++G++  P S    Y  TK A+  LT+ L  E+ 
Sbjct: 125 SICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELR 184

Query: 180 PDT---RVNCVAPGFVPTHFAEYITSND 204
                 R  C++PG V T FA  +   D
Sbjct: 185 EAQTHIRATCISPGVVETQFAFKLHDKD 212

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  150 bits (381), Expect = 1e-45
 Identities = 64/205 (31%), Positives = 101/205 (49%), Gaps = 9/205 (4%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI---EVIG 65
           RF  K  I+T S+ GIG   A     EGA+V ++ R  + ++E    +   G+   +V  
Sbjct: 2   RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNS 61

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAA---NPSVDSILQTKESVLDKLWDINV 122
           VV  V+    +  +IN T+++FGKIDV+V+NA A   +    +       +  K   +N+
Sbjct: 62  VVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNL 121

Query: 123 KSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP 180
           ++ I + +   PHL    G  V + S +AG Q Q     Y + K AL   T++ A ++A 
Sbjct: 122 QAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAK 181

Query: 181 D-TRVNCVAPGFVPTHFAEYITSND 204
              RVN V+PG V T F   +   D
Sbjct: 182 FGIRVNSVSPGMVETGFTNAMGMPD 206

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score =  149 bits (377), Expect = 3e-45
 Identities = 69/218 (31%), Positives = 110/218 (50%), Gaps = 7/218 (3%)

Query: 7   AKRF--QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVI 64
           A R+  +G  A+VT  ++GIG+GI E L   GASV   SR QK +++ + + +++G +V 
Sbjct: 1   AGRWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVE 60

Query: 65  GVVCHVSNGQQRKNLINQTIEKF-GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVK 123
             VC +S+  +R+ L+N     F GK++++V+NA                   +  IN +
Sbjct: 61  ASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIY-KEAKDYTVEDYSLIMSINFE 119

Query: 124 SSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD 181
           ++  L   A P L   +  +VV ISS++G       A+YG TK A+  LT+ LA E A D
Sbjct: 120 AAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKD 179

Query: 182 T-RVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPP 218
             RVN V PG + T   E    +     +++ L     
Sbjct: 180 NIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCA 217

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score =  146 bits (369), Expect = 5e-44
 Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 8/202 (3%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
           R  GKVAI+T  T GIG  IA +   EGA V+++ R     ++A   +     ++     
Sbjct: 3   RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPD-QIQFFQH 61

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
             S+      L + T + FG +  +V+NA       S+ +T  +   KL  +N+      
Sbjct: 62  DSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAV-NKSVEETTTAEWRKLLAVNLDGVFFG 120

Query: 129 LQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT--- 182
            +     ++    G+S++ +SSI G+    S+  Y  +K A+  ++K+ A + A      
Sbjct: 121 TRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDV 180

Query: 183 RVNCVAPGFVPTHFAEYITSND 204
           RVN V PG++ T   + +   +
Sbjct: 181 RVNTVHPGYIKTPLVDDLPGAE 202

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  144 bits (365), Expect = 2e-43
 Identities = 63/204 (30%), Positives = 101/204 (49%), Gaps = 7/204 (3%)

Query: 7   AKRF--QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVI 64
           ++R+  + K  +VT  T+GIG  I E     GA +   +R +  ++E + K + +G +V 
Sbjct: 1   SQRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVT 60

Query: 65  GVVCHVSNGQQRKNLINQTIEKF-GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVK 123
           G VC  S   +R+ L+      F GK+D++++N  A  S    L             N++
Sbjct: 61  GSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRS-KPTLDYTAEDFSFHISTNLE 119

Query: 124 SSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD 181
           S+  L Q A P L+     +++ +SSIAG    S  ++Y  TK AL  L + LA E A D
Sbjct: 120 SAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASD 179

Query: 182 T-RVNCVAPGFVPTHFAEYITSND 204
             R N VAP  + T  AE +  ++
Sbjct: 180 GIRANAVAPAVIATPLAEAVYDDE 203

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  144 bits (364), Expect = 2e-43
 Identities = 49/194 (25%), Positives = 86/194 (44%), Gaps = 8/194 (4%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
           R QGKVA+VT    G+G  + + L  EGA V  S   +    +   +L   G   + V  
Sbjct: 3   RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GERSMFVRH 59

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
            VS+      ++     + G ++V+V+NA      D +   +     +L  IN +S  + 
Sbjct: 60  DVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGD-METGRLEDFSRLLKINTESVFIG 118

Query: 129 LQDAAPHLQK-GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT---RV 184
            Q     +++ G S++ ++S++ + P    A Y  +K A+  LT+A A          RV
Sbjct: 119 CQQGIAAMKETGGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRV 178

Query: 185 NCVAPGFVPTHFAE 198
           N + P  + T   +
Sbjct: 179 NSIHPDGIYTPMMQ 192

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  144 bits (364), Expect = 5e-43
 Identities = 62/197 (31%), Positives = 96/197 (48%), Gaps = 7/197 (3%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIE---VIG 65
           RF GK  I+T S+ GIG   A     EGA V ++ R +  ++E   ++   G+    +  
Sbjct: 1   RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINA 60

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVD-SILQTKESVLDKLWDINVKS 124
           VV  V+    + ++IN T+ KFGKID++V+NA AN +   +       +  K + +N ++
Sbjct: 61  VVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQA 120

Query: 125 SILLLQDAAPHLQKGSSVV--LISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT 182
            I + Q    HL K    +  + S +AG Q  S    Y   K AL   T+  A ++    
Sbjct: 121 VIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHG 180

Query: 183 -RVNCVAPGFVPTHFAE 198
            RVN V+PG V T F  
Sbjct: 181 VRVNSVSPGAVATGFMG 197

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score =  144 bits (363), Expect = 5e-43
 Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 8/202 (3%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
           + +G+  ++T    G+G  + +R   EGA V V  +  + + E        G  V+G+V 
Sbjct: 2   KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELE---TDHGDNVLGIVG 58

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLD----KLWDINVKS 124
            V + + +K   ++ + +FGKID ++ NA       +++   E  LD    +++ INVK 
Sbjct: 59  DVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKG 118

Query: 125 SILLLQDAAPHLQK-GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTR 183
            I  ++   P L     +V+   S AG+ P     +Y   K A++GL + LA E+AP  R
Sbjct: 119 YIHAVKACLPALVASRGNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAFELAPYVR 178

Query: 184 VNCVAPGFVPTHFAEYITSNDG 205
           VN V  G + +      +   G
Sbjct: 179 VNGVGSGGINSDLRGPSSLGMG 200

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score =  141 bits (357), Expect = 3e-42
 Identities = 52/194 (26%), Positives = 100/194 (51%), Gaps = 3/194 (1%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
           K+F GKV +VT +   IG   A RL  EG ++ +    ++ +++A   ++ +G+E    V
Sbjct: 1   KKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYV 60

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
           C V++ +     ++  +  FGKID + +NA    +   +         ++  INV  +  
Sbjct: 61  CDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFH 120

Query: 128 LLQDAAPHLQKGS--SVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RV 184
           +L+  +  +   +   +V  +S+AG +   +MA YG +K A++ LT+  A ++AP   RV
Sbjct: 121 VLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRV 180

Query: 185 NCVAPGFVPTHFAE 198
           N ++PG++   F  
Sbjct: 181 NAISPGYMGPGFMW 194

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score =  138 bits (349), Expect = 4e-41
 Identities = 59/195 (30%), Positives = 95/195 (48%), Gaps = 5/195 (2%)

Query: 9   RF--QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGV 66
           R+  +G  A+VT  ++GIG+ I E L   GA V   SR +K +DE +   + +G+ V G 
Sbjct: 1   RWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGS 60

Query: 67  VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSI 126
           VC + +  +R  L+      F     ++ N A            E   + +   N +++ 
Sbjct: 61  VCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAY 120

Query: 127 LLLQ--DAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-R 183
            L Q         +  +V+ +SSIAG+    S+++Y  +K A+  +TK+LA E A D  R
Sbjct: 121 HLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIR 180

Query: 184 VNCVAPGFVPTHFAE 198
           VN VAPG + T   E
Sbjct: 181 VNSVAPGVILTPLVE 195

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score =  138 bits (349), Expect = 7e-41
 Identities = 60/202 (29%), Positives = 97/202 (48%), Gaps = 6/202 (2%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
           R Q KVAI+T    GIG   A+     GA VV++     +  +    + +  + +  V C
Sbjct: 3   RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDV-ISFVHC 61

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVD-SILQTKESVLDKLWDINVKSSIL 127
            V+  +  +NL++ TI K GK+D++  N     +   SIL+       ++ DINV  + L
Sbjct: 62  DVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFL 121

Query: 128 LLQDAAPH--LQKGSSVVLISSIAGYQP-QSSMAMYGVTKTALLGLTKALAAEMAPDT-R 183
           + + AA      K  S+V  +SI+ +   +    +Y  TK A+LGLT +L  E+     R
Sbjct: 122 VAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIR 181

Query: 184 VNCVAPGFVPTHFAEYITSNDG 205
           VNCV+P  V +     +   D 
Sbjct: 182 VNCVSPYIVASPLLTDVFGVDS 203

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  136 bits (344), Expect = 2e-40
 Identities = 58/204 (28%), Positives = 99/204 (48%), Gaps = 19/204 (9%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCH 69
           GKVA+VT + QGIG   AE L L+GA V +     +   +    L  +    + + + C 
Sbjct: 3   GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCD 62

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLL 129
           V++ QQ ++   + ++ FG++D++V+NA  N   +          +K   IN+ S I   
Sbjct: 63  VADQQQLRDTFRKVVDHFGRLDILVNNAGVNNEKN---------WEKTLQINLVSVISGT 113

Query: 130 QDAAPHLQK-----GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTK--ALAAEMAPD- 181
                ++ K     G  ++ +SS+AG  P +   +Y  +K  ++G T+  ALAA +    
Sbjct: 114 YLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNSG 173

Query: 182 TRVNCVAPGFVPTHFAEYITSNDG 205
            R+N + PGFV T   E I   + 
Sbjct: 174 VRLNAICPGFVNTAILESIEKEEN 197

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  138 bits (348), Expect = 2e-40
 Identities = 50/198 (25%), Positives = 86/198 (43%), Gaps = 16/198 (8%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVS---------SRKQKNVDEAVVKLKAR 59
           RF G+V +VT +  G+G   A      GA VVV+          +     D+ V +++ R
Sbjct: 4   RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR 63

Query: 60  GIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWD 119
           G + +     V  G++   L+   ++ FG+IDVVV+NA       S  +  +   D +  
Sbjct: 64  GGKAVANYDSVEAGEK---LVKTALDTFGRIDVVVNNAGILRD-RSFSRISDEDWDIIQR 119

Query: 120 INVKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAE 177
           ++++ S  + + A  H+  Q    +++ +S +G       A Y   K  LLGL   L  E
Sbjct: 120 VHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVIE 179

Query: 178 MAPDT-RVNCVAPGFVPT 194
              +    N +AP     
Sbjct: 180 GRKNNIHCNTIAPNAGSR 197

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score =  136 bits (343), Expect = 3e-40
 Identities = 49/192 (25%), Positives = 81/192 (42%), Gaps = 7/192 (3%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
             GK  I+T   +G+G   A +    GA VV++    +       +L   G         
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDAARYQHLD 59

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLL 129
           V+  +  + ++    E+FG +D +V N A   +   +         K+ +IN+    + +
Sbjct: 60  VTIEEDWQRVVAYAREEFGSVDGLV-NNAGISTGMFLETESVERFRKVVEINLTGVFIGM 118

Query: 130 QDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RVNC 186
           +   P +    G S+V ISS AG    +  + YG +K  + GL+K  A E+  D  RVN 
Sbjct: 119 KTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNS 178

Query: 187 VAPGFVPTHFAE 198
           V PG   T    
Sbjct: 179 VHPGMTYTPMTA 190

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score =  135 bits (342), Expect = 4e-40
 Identities = 57/202 (28%), Positives = 98/202 (48%), Gaps = 4/202 (1%)

Query: 3   KMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIE 62
           K       + KVA+VT + +GIG  IA+ L    + V+  SR QK+ D  V ++K+ G E
Sbjct: 1   KENYYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYE 60

Query: 63  VIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINV 122
             G    VS  ++   +IN+ + +   +D++V+NA        + + K    + +   N+
Sbjct: 61  SSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFL-RMKNDEWEDVLRTNL 119

Query: 123 KSSILLLQDAAPH--LQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP 180
            S   + Q  +      +   ++ ISSI G       A Y  +K  ++G TK+LA E+A 
Sbjct: 120 NSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELAS 179

Query: 181 DT-RVNCVAPGFVPTHFAEYIT 201
               VN +APGF+ +   + I+
Sbjct: 180 RNITVNAIAPGFISSDMTDKIS 201

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  135 bits (341), Expect = 7e-40
 Identities = 48/196 (24%), Positives = 89/196 (45%), Gaps = 6/196 (3%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKL-KARGIEVIGV 66
           +  QGK  IVT +++GIG  +A  L   GA VVV++R ++ + + V    +        +
Sbjct: 10  EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYI 69

Query: 67  VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSI 126
              + +    +  + Q  +  G +D+++ N   N S++ +       + K  ++N  S +
Sbjct: 70  AGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLN-LFHDDIHHVRKSMEVNFLSYV 128

Query: 127 LLLQDAAPHL-QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT--- 182
           +L   A P L Q   S+V++SS+AG      +A Y  +K AL G   ++  E +      
Sbjct: 129 VLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNV 188

Query: 183 RVNCVAPGFVPTHFAE 198
            +     G + T  A 
Sbjct: 189 SITLCVLGLIDTETAM 204

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  134 bits (338), Expect = 2e-39
 Identities = 62/194 (31%), Positives = 100/194 (51%), Gaps = 4/194 (2%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGV 66
           K   GKVA+ T + +GIG GIA  LG  GASVVV+     K  +E V +LK  G + + +
Sbjct: 2   KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAI 61

Query: 67  VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSI 126
              +S   +   L ++ +  FG +D V+SN+      D  L+  + + DK++++N +   
Sbjct: 62  QADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCD-ELEVTQELFDKVFNLNTRGQF 120

Query: 127 LLLQDAAPHLQKGSSVVLISSIAG-YQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RV 184
            + Q    H ++G  ++L SSIA       + A+Y  +K A+ G  +A A +       V
Sbjct: 121 FVAQQGLKHCRRGGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTV 180

Query: 185 NCVAPGFVPTHFAE 198
           NC+APG V T   +
Sbjct: 181 NCIAPGGVKTDMFD 194

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score =  134 bits (337), Expect = 3e-39
 Identities = 53/210 (25%), Positives = 82/210 (39%), Gaps = 15/210 (7%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKL-KARGIE 62
             +   F  K  IVT   +GIG      +   GA+V V  R   +  E   K+ K  G++
Sbjct: 3   FTI--SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVK 60

Query: 63  VIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINV 122
                C VSN       I Q     G I  +++NA  +  V    +        ++D+NV
Sbjct: 61  TKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSV-VKPATELTHEDFAFVYDVNV 119

Query: 123 KSSILLLQDAAPH---LQKGSSVVLIS-------SIAGYQPQSSMAMYGVTKTALLGLTK 172
                  +  A      Q+  S+V+ S       + +      +   Y  +K A   L K
Sbjct: 120 FGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVK 179

Query: 173 ALAAEMAPD-TRVNCVAPGFVPTHFAEYIT 201
            LAAE A    RVN ++PG+V T    ++ 
Sbjct: 180 GLAAEWASAGIRVNALSPGYVNTDQTAHMD 209

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  133 bits (336), Expect = 3e-39
 Identities = 50/208 (24%), Positives = 90/208 (43%), Gaps = 13/208 (6%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
            F G  A+VT + +GIG    + L   GA VV  +R     +  +V L      +  V  
Sbjct: 2   NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRT----NSDLVSLAKECPGIEPVCV 57

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
            + +         + +   G +D++V+NAA        L+  +   D+ + +N++S   +
Sbjct: 58  DLGDWDA----TEKALGGIGPVDLLVNNAALVIM-QPFLEVTKEAFDRSFSVNLRSVFQV 112

Query: 129 LQDAAPHLQKGSS---VVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRV 184
            Q  A  +        +V +SS+  +    ++  Y  TK A+  LTKA+A E+ P   RV
Sbjct: 113 SQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRV 172

Query: 185 NCVAPGFVPTHFAEYITSNDGVVSSVSS 212
           N V P  V T   + ++++      +  
Sbjct: 173 NSVNPTVVLTDMGKKVSADPEFARKLKE 200

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  133 bits (335), Expect = 4e-39
 Identities = 43/195 (22%), Positives = 84/195 (43%), Gaps = 8/195 (4%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
           R + K  ++T +  GIG    E    EGA +V    ++  + EA     A  +    VV 
Sbjct: 2   RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREA-----AEAVGAHPVVM 56

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
            V++    +    + +   G++D VV  A      +   +      + +  +N+  S L+
Sbjct: 57  DVADPASVERGFAEALAHLGRLDGVVHYAGITR-DNFHWKMPLEDWELVLRVNLTGSFLV 115

Query: 129 LQDAAPHLQKGSSVVLI-SSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNC 186
            + A+  +++ +   ++ ++   Y      A Y  +   ++GLT+ LA E+     RVN 
Sbjct: 116 AKAASEAMREKNPGSIVLTASRVYLGNLGQANYAASMAGVVGLTRTLALELGRWGIRVNT 175

Query: 187 VAPGFVPTHFAEYIT 201
           +APGF+ T     + 
Sbjct: 176 LAPGFIETRMTAKVP 190

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  132 bits (332), Expect = 1e-38
 Identities = 54/203 (26%), Positives = 94/203 (46%), Gaps = 13/203 (6%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
           M     G+  +VT + +GIG G  + L   GA VV  SR Q ++D  V +       +  
Sbjct: 1   MELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG----IEP 56

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSS 125
           V   + + +       + +   G +D++V N AA   +   L+  +   D+ +++N+++ 
Sbjct: 57  VCVDLGDWEA----TERALGSVGPVDLLV-NNAAVALLQPFLEVTKEAFDRSFEVNLRAV 111

Query: 126 ILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD- 181
           I + Q  A  L       ++V +SS    +  ++ ++Y  TK AL  LTK +A E+ P  
Sbjct: 112 IQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHK 171

Query: 182 TRVNCVAPGFVPTHFAEYITSND 204
            RVN V P  V T   +   S+ 
Sbjct: 172 IRVNAVNPTVVMTSMGQATWSDP 194

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score =  132 bits (333), Expect = 1e-38
 Identities = 38/218 (17%), Positives = 72/218 (33%), Gaps = 17/218 (7%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDE-AVVKLKARGIEVIGVV 67
               K  I  A+  GIG   +  L        V   + +N    A +K     + +    
Sbjct: 2   DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHT 61

Query: 68  CHVSN-GQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSI 126
             V+    + K L+ +  ++   +D++++ A             +  +++   IN    +
Sbjct: 62  YDVTVPVAESKKLLKKIFDQLKTVDILINGAG---------ILDDHQIERTIAINFTGLV 112

Query: 127 LLLQDAAPHLQ-----KGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD 181
                            G  +  I S+ G+     + +Y  +K A++  T +LA      
Sbjct: 113 NTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPIT 172

Query: 182 -TRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPP 218
                 + PG   T       S   V   V+ L LS P
Sbjct: 173 GVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHP 210

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  132 bits (334), Expect = 2e-38
 Identities = 51/201 (25%), Positives = 90/201 (44%), Gaps = 8/201 (3%)

Query: 5   KMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA-----R 59
                 QG+VAIVT    GIG  I + L   G++VV++SRK + +  A  +L+A     +
Sbjct: 5   LAPGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTK 64

Query: 60  GIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWD 119
              VI + C++ N ++  NL+  T++ FGKI+ +V+N      +             + +
Sbjct: 65  QARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQF-LSPAEHISSKGWHAVLE 123

Query: 120 INVKSSILLLQDAAPHLQ-KGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEM 178
            N+  +  + +        +    ++   +            G  +  +  LTK+LA E 
Sbjct: 124 TNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHSGAARAGVYNLTKSLALEW 183

Query: 179 APDT-RVNCVAPGFVPTHFAE 198
           A    R+NCVAPG + +  A 
Sbjct: 184 ACSGIRINCVAPGVIYSQTAV 204

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score =  131 bits (330), Expect = 3e-38
 Identities = 51/195 (26%), Positives = 89/195 (45%), Gaps = 5/195 (2%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKL--KARGIEVIGV 66
           RF  +V ++T    G+G   A RL  EGA + +     + ++ +   +   A   EV+  
Sbjct: 1   RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTT 60

Query: 67  VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSI 126
           V  VS+  Q +  +  T E+FG+ID   +NA      +       +  DK+  IN++   
Sbjct: 61  VADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVF 120

Query: 127 LLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TR 183
           L L+     +++     VV  +S+ G +   + + Y   K  ++GLT+  A E      R
Sbjct: 121 LGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIR 180

Query: 184 VNCVAPGFVPTHFAE 198
           +N +APG + T   E
Sbjct: 181 INAIAPGAIWTPMVE 195

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score =  130 bits (328), Expect = 6e-38
 Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 9/207 (4%)

Query: 1   MEKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG 60
            + +    R  GK AI+T +  GIG  IA      GASVVVS       +  V +++  G
Sbjct: 4   SDNL----RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLG 59

Query: 61  IEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDI 120
            +     C +++ Q+   L +  I K GK+D++V+NA              +   + +++
Sbjct: 60  GQAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGG--PKPFDMPMADFRRAYEL 117

Query: 121 NVKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEM 178
           NV S   L Q  AP +    G  ++ I+S+A      +M  Y  +K A   L + +A ++
Sbjct: 118 NVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDL 177

Query: 179 APDT-RVNCVAPGFVPTHFAEYITSND 204
                RVN +APG + T   + + + +
Sbjct: 178 GEKNIRVNGIAPGAILTDALKSVITPE 204

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score =  128 bits (322), Expect = 5e-37
 Identities = 58/192 (30%), Positives = 95/192 (49%), Gaps = 6/192 (3%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
            +VA+VT +T GIG  IA RLG EG  V V +R ++ +   + +L+  G+E  G  C V 
Sbjct: 2   SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVR 61

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQD 131
           +  + + L+   +E++G +DV+V+N A  P   +  +  + +   + + N+     + + 
Sbjct: 62  SVPEIEALVAAVVERYGPVDVLVNN-AGRPGGGATAELADELWLDVVETNLTGVFRVTKQ 120

Query: 132 AAPHL----QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNC 186
                    +    +V I+S  G Q     A Y  +K  ++G TKAL  E+A     VN 
Sbjct: 121 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNA 180

Query: 187 VAPGFVPTHFAE 198
           V PGFV T  A 
Sbjct: 181 VCPGFVETPMAA 192

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score =  127 bits (320), Expect = 7e-37
 Identities = 60/193 (31%), Positives = 95/193 (49%), Gaps = 6/193 (3%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
           R  GK  +VT +  GIG    +    EGAS+V   R+++ + EAV  L+A   E I VV 
Sbjct: 2   RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEA---EAIAVVA 58

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
            VS+ +  + +  + +E+FG++  V   A    S  S     E   +K+  +N+  S L+
Sbjct: 59  DVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLE-AWEKVLRVNLTGSFLV 117

Query: 129 LQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNCV 187
            + A   L++G S+VL  S+AG         Y   K  ++GL + LA E+A    RVN +
Sbjct: 118 ARKAGEVLEEGGSLVLTGSVAGLGAFGLAH-YAAGKLGVVGLARTLALELARKGVRVNVL 176

Query: 188 APGFVPTHFAEYI 200
            PG + T     +
Sbjct: 177 LPGLIQTPMTAGL 189

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score =  127 bits (320), Expect = 7e-37
 Identities = 63/208 (30%), Positives = 103/208 (49%), Gaps = 6/208 (2%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKL-KARGIEVIGVVC 68
            +G+VA+VT  ++G+GFGIA+ L   G SVVV+SR  +   EA  KL +  G+E +   C
Sbjct: 3   LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRC 62

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
            VSN ++ K L+    EKFGK+D VV+ A  N       +       ++ ++N+  +  +
Sbjct: 63  DVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINR-RHPAEEFPLDEFRQVIEVNLFGTYYV 121

Query: 129 LQDAA---PHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRV 184
            ++A          S + + S         +++ Y  +K  +  LTKALA E      RV
Sbjct: 122 CREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIRV 181

Query: 185 NCVAPGFVPTHFAEYITSNDGVVSSVSS 212
           N +APG+  T   E + S+   +  +  
Sbjct: 182 NVIAPGWYRTKMTEAVFSDPEKLDYMLK 209

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  127 bits (321), Expect = 1e-36
 Identities = 53/202 (26%), Positives = 93/202 (46%), Gaps = 4/202 (1%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK-LKARGIEVI 64
            +   +GKVA+VT + +GIG  +A  LG  G  V+V+        E VV  +K  G +  
Sbjct: 12  QSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAA 71

Query: 65  GVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKS 124
            V  +V   +    +  + ++ FGK+D+V  + +   S   +        D+++ IN + 
Sbjct: 72  CVKANVGVVEDIVRMFEEAVKIFGKLDIVC-SNSGVVSFGHVKDVTPEEFDRVFTINTRG 130

Query: 125 SILLLQDAAPHLQKGSSVVLISSIAGYQPQSSM-AMYGVTKTALLGLTKALAAEMAPD-T 182
              + ++A  HL+ G  ++L+ SI G        A+Y  +K A+    + +A +MA    
Sbjct: 131 QFFVAREAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKI 190

Query: 183 RVNCVAPGFVPTHFAEYITSND 204
            VN VAPG + T     +    
Sbjct: 191 TVNVVAPGGIKTDMYHAVCREY 212

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score =  126 bits (318), Expect = 4e-36
 Identities = 45/208 (21%), Positives = 88/208 (42%), Gaps = 4/208 (1%)

Query: 2   EKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-G 60
           + M     FQGKVA +T    G+G G+   L   GA  V++SRK   +     ++ ++ G
Sbjct: 15  KAMLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTG 74

Query: 61  IEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDI 120
            +V  + C V +    +N +++ I+  G  ++V++NAA N    +   +  +       +
Sbjct: 75  NKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIV 134

Query: 121 NVKSSILLLQDAAPHLQKGSSVVLI--SSIAGYQPQSSMAMYGVTKTALLGLTKALAAEM 178
              ++ + L+     ++       +  ++I        +      K  +  ++K+LAAE 
Sbjct: 135 LNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEW 194

Query: 179 APD-TRVNCVAPGFVPTHFAEYITSNDG 205
                R N + PG + T  A       G
Sbjct: 195 GKYGMRFNVIQPGPIKTKGAFSRLDPTG 222

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  122 bits (308), Expect = 4e-35
 Identities = 52/195 (26%), Positives = 88/195 (45%), Gaps = 7/195 (3%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
           R  GKVA+V+   +G+G      +  EGA VV      +       +L         V  
Sbjct: 3   RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAA---RYVHL 59

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
            V+   Q K  ++  +  FG + V+V N A   ++ +I     +   ++ D+N+    L 
Sbjct: 60  DVTQPAQWKAAVDTAVTAFGGLHVLV-NNAGILNIGTIEDYALTEWQRILDVNLTGVFLG 118

Query: 129 LQDAAPHLQKG--SSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVN 185
           ++     +++    S++ ISSI G     +   Y  TK A+ GLTK+ A E+ P   RVN
Sbjct: 119 IRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVN 178

Query: 186 CVAPGFVPTHFAEYI 200
            + PG V T   +++
Sbjct: 179 SIHPGLVKTPMTDWV 193

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score =  122 bits (307), Expect = 6e-35
 Identities = 39/194 (20%), Positives = 66/194 (34%), Gaps = 9/194 (4%)

Query: 15  AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQ 74
           AIVT      G G A RL   G +V       K  DE                    + Q
Sbjct: 3   AIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDEL------EAFAETYPQLKPMSEQ 56

Query: 75  QRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAP 134
           +   LI      +G++DV+VSN    P    I +          +        L+   A 
Sbjct: 57  EPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVAS 116

Query: 135 HL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNCVAPGF 191
            +  +K   ++ I+S   + P   ++ Y   +     L  AL+ E+      V  + P +
Sbjct: 117 QMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNY 176

Query: 192 VPTHFAEYITSNDG 205
           + +  + Y    + 
Sbjct: 177 LHSEDSPYFYPTEP 190

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score =  121 bits (305), Expect = 1e-34
 Identities = 41/199 (20%), Positives = 81/199 (40%), Gaps = 11/199 (5%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGAS-------VVVSSRKQKNVDEAVVKLKARGIEVIG 65
            + ++T + +GIG  IA                +V+SSR   ++++  ++ +A G     
Sbjct: 2   HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDT 61

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSS 125
           +   +S+    + L    +E++G ID +V N A      ++    E   D   + N+K +
Sbjct: 62  ITADISDMADVRRLTTHIVERYGHIDCLV-NNAGVGRFGALSDLTEEDFDYTMNTNLKGT 120

Query: 126 ILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT- 182
             L Q     +  Q    +  I+S+A  +     ++Y ++K    GL + +         
Sbjct: 121 FFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNV 180

Query: 183 RVNCVAPGFVPTHFAEYIT 201
           R+  V PG V T     + 
Sbjct: 181 RITDVQPGAVYTPMWGKVD 199

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  121 bits (305), Expect = 1e-34
 Identities = 46/197 (23%), Positives = 84/197 (42%), Gaps = 7/197 (3%)

Query: 6   MAKRFQGKVAIVT--ASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV 63
           +     GK A+V    + + +GF IA +L   GA V +S + ++   EA    +A G  +
Sbjct: 2   LTVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGAL 61

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAA---ANPSVDSILQTKESVLDKLWDI 120
           +     V+  ++   L     E FG +D +V   A           + T+        ++
Sbjct: 62  L-FRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEV 120

Query: 121 NVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP 180
           +  S + + + A P L++G  +V ++  A  +      +  + K AL    + LA E+ P
Sbjct: 121 SAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAYELGP 180

Query: 181 D-TRVNCVAPGFVPTHF 196
              RVN ++ G V T  
Sbjct: 181 KGVRVNAISAGPVRTVA 197

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score =  121 bits (304), Expect = 1e-34
 Identities = 52/190 (27%), Positives = 95/190 (50%), Gaps = 7/190 (3%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
           F+GK+A+VT +++GIG  IAE L   GA V+ ++  +         L A G    G++ +
Sbjct: 2   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANG---KGLMLN 58

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLL 129
           V++    ++++ +   +FG++D++V+NA        +    E   + + + N+ S   L 
Sbjct: 59  VTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEW-NDIIETNLSSVFRLS 117

Query: 130 QDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNC 186
           +     +  ++   ++ I S+ G       A Y   K  L+G +K+LA E+A     VN 
Sbjct: 118 KAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNV 177

Query: 187 VAPGFVPTHF 196
           VAPGF+ T  
Sbjct: 178 VAPGFIETDM 187

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  119 bits (299), Expect = 2e-33
 Identities = 48/233 (20%), Positives = 84/233 (36%), Gaps = 48/233 (20%)

Query: 13  KVAIVTASTQGIGFGIAERLG-LEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
            VA+VT   +GIG  I   L  L    VV+++R       AV +L+A G+        + 
Sbjct: 4   HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDID 63

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQD 131
           + Q  + L +   +++G +DV+V+NA     V +         +     N   +  +  +
Sbjct: 64  DLQSIRALRDFLRKEYGGLDVLVNNAGIAFKV-ADPTPFHIQAEVTMKTNFFGTRDVCTE 122

Query: 132 AAPHLQKGSSVVLISSIAGYQPQSSMAM-------------------------------- 159
             P ++    VV +SSI   +   S +                                 
Sbjct: 123 LLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVH 182

Query: 160 ---------YGVTKTALLGLTKALAAEMAPDT-----RVNCVAPGFVPTHFAE 198
                    YGVTK  +  L++  A +++         +N   PG+V T  A 
Sbjct: 183 QKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAG 235

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score =  118 bits (297), Expect = 2e-33
 Identities = 61/212 (28%), Positives = 103/212 (48%), Gaps = 6/212 (2%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK-LKARGIEVI 64
           M K  +GKV ++T S+ G+G  +A R   E A VVV+ R +++   +V++ +K  G E I
Sbjct: 1   MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAI 60

Query: 65  GVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKS 124
            V   V+      NL+   I++FGK+DV+++NA     V    +   S  +K+ D N+  
Sbjct: 61  AVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVS-SHEMSLSDWNKVIDTNLTG 119

Query: 125 SILLLQDAAP---HLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD 181
           + L  ++A           +V+ +SS+    P      Y  +K  +  +T+ LA E AP 
Sbjct: 120 AFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPK 179

Query: 182 T-RVNCVAPGFVPTHFAEYITSNDGVVSSVSS 212
             RVN + PG + T       ++    + V S
Sbjct: 180 GIRVNNIGPGAINTPINAEKFADPEQRADVES 211

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score =  117 bits (293), Expect = 8e-33
 Identities = 48/199 (24%), Positives = 96/199 (48%), Gaps = 8/199 (4%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
           R  GK A++T S +GIG   AE    EGA V ++    +       ++   G     +  
Sbjct: 2   RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI---GPAACAIAL 58

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
            V++       + + ++++G ID++V+NAA    +  I++      D+L+ INV  ++ +
Sbjct: 59  DVTDQASIDRCVAELLDRWGSIDILVNNAALFD-LAPIVEITRESYDRLFAINVSGTLFM 117

Query: 129 LQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RV 184
           +Q  A  +     G  ++ ++S AG + ++ + +Y  TK A++ LT++    +      V
Sbjct: 118 MQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINV 177

Query: 185 NCVAPGFVPTHFAEYITSN 203
           N +APG V     + + + 
Sbjct: 178 NAIAPGVVDGEHWDGVDAK 196

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  115 bits (289), Expect = 3e-32
 Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 14/201 (6%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
           R  GKV I+TA+ QGIG   A     EGA V+ +   +  + E       +   +   V 
Sbjct: 3   RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQEL-----EKYPGIQTRVL 57

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
            V+     K  I+Q   +  ++DV+  N A      ++L  +E   D   ++NV+S  L+
Sbjct: 58  DVTK----KKQIDQFANEVERLDVLF-NVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLM 112

Query: 129 LQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RV 184
           ++   P +     G+ + + S  +  +   +  +Y  TK A++GLTK++AA+      R 
Sbjct: 113 IKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRC 172

Query: 185 NCVAPGFVPTHFAEYITSNDG 205
           NCV PG V T   +      G
Sbjct: 173 NCVCPGTVDTPSLQERIQARG 193

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score =  115 bits (288), Expect = 4e-32
 Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 6/193 (3%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK--LKARGIEVIGVVC 68
           +GKVA+VT ST GIG GIA  L  +GA +V++        E V        G++V+    
Sbjct: 3   KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGA 62

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
            +S G+  + L++  + + G+ID++V N A       I        D +  +N+ +    
Sbjct: 63  DLSKGEAVRGLVDNAVRQMGRIDILV-NNAGIQHTALIEDFPTEKWDAILALNLSAVFHG 121

Query: 129 LQDAAPHLQKGS--SVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVN 185
              A PH++K     ++ I+S  G    ++ + Y   K  ++G TK  A E A      N
Sbjct: 122 TAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITAN 181

Query: 186 CVAPGFVPTHFAE 198
            + PG+V T   E
Sbjct: 182 AICPGWVRTPLVE 194

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score =  114 bits (287), Expect = 5e-32
 Identities = 55/190 (28%), Positives = 93/190 (48%), Gaps = 5/190 (2%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
            V +VT +++GIG  IA  LG  G  V+V+ +R  K  +E   +++A G + I     VS
Sbjct: 2   PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVS 61

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQD 131
                + ++   I+ +G IDVVV+N A       +++ K+S  D++ D+N+    L  Q 
Sbjct: 62  KEADVEAMMKTAIDAWGTIDVVVNN-AGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQA 120

Query: 132 AAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNCVA 188
           A   +  ++   ++ I+S+ G       A Y   K  ++G +K  A E A     VN V 
Sbjct: 121 ATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVC 180

Query: 189 PGFVPTHFAE 198
           PGF+ +    
Sbjct: 181 PGFIASDMTA 190

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  114 bits (286), Expect = 9e-32
 Identities = 42/214 (19%), Positives = 85/214 (39%), Gaps = 16/214 (7%)

Query: 7   AKRFQGKVAIVTASTQGIGFGIAERL---GLEGASVVVSSRKQKNVDEAVVKLKAR--GI 61
           A      V ++T +++G G  +A +L      G+ ++VS+R +  + +   +L A+   +
Sbjct: 1   ADGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDL 60

Query: 62  EVIGVVCHVSNGQQRKNLINQTIE----KFGKIDVVVSNA--AANPSVDSILQTKESVLD 115
           +V+     +      + L++   E    +  +  ++++NA    + S   +     + ++
Sbjct: 61  KVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVN 120

Query: 116 KLWDINVKSSILLLQDAAPHLQKGSSVVLI----SSIAGYQPQSSMAMYGVTKTALLGLT 171
             W +N+ S + L        Q    +       SS+   QP     +Y   K A   L 
Sbjct: 121 NYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLY 180

Query: 172 KALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDG 205
           + LAAE  P  RV   APG +     +       
Sbjct: 181 QVLAAE-EPSVRVLSYAPGPLDNDMQQLARETSK 213

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  111 bits (279), Expect = 8e-31
 Identities = 39/211 (18%), Positives = 81/211 (38%), Gaps = 28/211 (13%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVV--SSRKQKNVDEAVVKLKARGIEVIGVVCH 69
               +VT + +GIG G+ ++L  +     +  ++R  +   E       +   V  +   
Sbjct: 3   PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELK---SIKDSRVHVLPLT 59

Query: 70  VSNGQQRKNLINQTIEKFGK--IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
           V+  +     +++  E  G   + ++++NA    S  +  +   +V+ +  D+N  S +L
Sbjct: 60  VTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVL 119

Query: 128 LLQDAAPHLQKG--------------------SSVVLISSIAGYQPQSSMAMYGVTKTAL 167
           L Q   P L+                      S +  I+       Q  +  Y ++K A+
Sbjct: 120 LTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAI 179

Query: 168 LGLTKALAAEMAPD-TRVNCVAPGFVPTHFA 197
               + LA ++  D   V    PG+V T+  
Sbjct: 180 NMFGRTLAVDLKDDNVLVVNFCPGWVQTNLG 210

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  112 bits (281), Expect = 1e-30
 Identities = 39/195 (20%), Positives = 75/195 (38%), Gaps = 12/195 (6%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVV------SSRKQKNVDEAVVKLKARGIEVIGV 66
            V ++T  + GIG  +A RL  + +            + Q  + EA   L      +  +
Sbjct: 3   TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETL 62

Query: 67  VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSI 126
              V + +       +  E    +   +   A    +  +    E  +  + D+NV  ++
Sbjct: 63  QLDVRDSKSVAAARERVTEGRVDV---LVCNAGLGLLGPLEALGEDAVASVLDVNVVGTV 119

Query: 127 LLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TR 183
            +LQ   P +  +    V++  S+ G        +Y  +K AL GL ++LA  + P    
Sbjct: 120 RMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVH 179

Query: 184 VNCVAPGFVPTHFAE 198
           ++ +  G V T F E
Sbjct: 180 LSLIECGPVHTAFME 194

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score =  111 bits (278), Expect = 1e-30
 Identities = 60/192 (31%), Positives = 90/192 (46%), Gaps = 5/192 (2%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           KVA+VT + QGIG  IA RL  +G +V ++            ++   G   + V   VS+
Sbjct: 2   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD 61

Query: 73  GQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDA 132
             Q    + Q  +  G  DV+V+NA   PS   I      ++DK+++INVK  I  +Q A
Sbjct: 62  RDQVFAAVEQARKTLGGFDVIVNNAGVAPSTP-IESITPEIVDKVYNINVKGVIWGIQAA 120

Query: 133 APHLQKGSSVVLISS---IAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RVNCVA 188
               +K      I +    AG+     +A+Y  +K A+ GLT+  A ++AP    VN   
Sbjct: 121 VEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYC 180

Query: 189 PGFVPTHFAEYI 200
           PG V T     I
Sbjct: 181 PGIVKTPMWAEI 192

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  110 bits (275), Expect = 3e-30
 Identities = 43/195 (22%), Positives = 84/195 (43%), Gaps = 15/195 (7%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
           F  +  +VT   +GIG  IA+RL  +G  V V+ R                  + GV   
Sbjct: 5   FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGS-----------GAPKGLFGVEVD 53

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLL 129
           V++            E  G ++V+V + A   +   +++  E   +K+ + N+  +  + 
Sbjct: 54  VTDSDAVDRAFTAVEEHQGPVEVLV-SNAGLSADAFLMRMTEEKFEKVINANLTGAFRVA 112

Query: 130 QDAAP--HLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RVNC 186
           Q A+      K   ++ I S++G     + A Y  +K  ++G+ +++A E++      N 
Sbjct: 113 QRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTANV 172

Query: 187 VAPGFVPTHFAEYIT 201
           VAPG++ T     + 
Sbjct: 173 VAPGYIDTDMTRALD 187

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  109 bits (274), Expect = 3e-30
 Identities = 32/189 (16%), Positives = 66/189 (34%), Gaps = 15/189 (7%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHV 70
           + +  +V      +G    +        V      +     A V +K             
Sbjct: 1   EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVK----------MTD 50

Query: 71  SNGQQRKNLINQTIEKFG--KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
           S  +Q   +  +  +  G  K+D ++  A      ++  ++     D +W  ++ +S + 
Sbjct: 51  SFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTIS 110

Query: 129 LQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMA---PDTRVN 185
              A  HL++G  + L  + A       M  YG+ K A+  L ++LA + +         
Sbjct: 111 SHLATKHLKEGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAI 170

Query: 186 CVAPGFVPT 194
            V P  + T
Sbjct: 171 AVLPVTLDT 179

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score =  109 bits (274), Expect = 4e-30
 Identities = 46/196 (23%), Positives = 85/196 (43%), Gaps = 19/196 (9%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHV 70
           + K  +V A+++GIG  +A+ L  EGA V + +R ++ +  +  +          VVC +
Sbjct: 3   RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRY---------VVCDL 53

Query: 71  SNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQ 130
                    ++   EK  ++D++V   A  P      +       +  D    + I +++
Sbjct: 54  R------KDLDLLFEKVKEVDILV-LNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVR 106

Query: 131 --DAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RVNCV 187
               A   +    +V I+S +   P  ++      + AL G  K L+ E+AP    VNCV
Sbjct: 107 NYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNCV 166

Query: 188 APGFVPTHFAEYITSN 203
           APG+  T   + + S 
Sbjct: 167 APGWTETERVKELLSE 182

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score =  109 bits (274), Expect = 4e-30
 Identities = 42/193 (21%), Positives = 80/193 (41%), Gaps = 8/193 (4%)

Query: 9   RFQGKVAIVT--ASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGV 66
              GK  +VT  AS   I +GIA+ +  EGA +  + +  K +   V +  A+    I +
Sbjct: 2   FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDK-LKGRVEEFAAQLGSDIVL 60

Query: 67  VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANP----SVDSILQTKESVLDKLWDINV 122
            C V+       +  +  + + K D  V +    P      D +            DI+ 
Sbjct: 61  QCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISS 120

Query: 123 KSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT 182
            S + + +     L  GS+++ +S +   +   +  + G+ K +L    + +A  M P+ 
Sbjct: 121 YSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEG 180

Query: 183 -RVNCVAPGFVPT 194
            RVN ++ G + T
Sbjct: 181 VRVNAISAGPIRT 193

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score =  108 bits (271), Expect = 1e-29
 Identities = 42/195 (21%), Positives = 77/195 (39%), Gaps = 23/195 (11%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           + A+VT    G+G   A  L   G  VVV   +++            G ++I V   V+ 
Sbjct: 2   RSALVTGGASGLGRAAALALKARGYRVVVLDLRRE------------GEDLIYVEGDVTR 49

Query: 73  GQQRKNLINQTIEKFGKIDVVVSN--AAANPSVDSILQTKESVLDKLWDINVKSSILLLQ 130
            +  +  + +  E+     VV +     A   +            ++ ++N+  +  +L+
Sbjct: 50  EEDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLR 109

Query: 131 DAAPHL--------QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD- 181
            AA  +         +   +V  +S+A ++ Q   A Y  +K  ++ LT   A E+A   
Sbjct: 110 LAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGWG 169

Query: 182 TRVNCVAPGFVPTHF 196
            RV  VAPG   T  
Sbjct: 170 IRVVTVAPGLFDTPL 184

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  106 bits (265), Expect = 7e-29
 Identities = 41/205 (20%), Positives = 80/205 (39%), Gaps = 11/205 (5%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
           +  +G VA++T    G+G   AERL  +GAS V+        +    KL    +     V
Sbjct: 1   RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADV 60

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDS--ILQTKESVLDKLWDINVKSS 125
               + Q    L      +          A A+ + +             ++ D+N+  +
Sbjct: 61  TSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGT 120

Query: 126 ILLLQDAAPHL--------QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAE 177
             +++  A  +         +   ++  +S+A ++ Q   A Y  +K  ++G+T  +A +
Sbjct: 121 FNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARD 180

Query: 178 MAPD-TRVNCVAPGFVPTHFAEYIT 201
           +AP   RV  +APG   T     + 
Sbjct: 181 LAPIGIRVMTIAPGLFGTPLLTSLP 205

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  104 bits (261), Expect = 3e-28
 Identities = 42/186 (22%), Positives = 67/186 (36%), Gaps = 12/186 (6%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
           GKV IV      +G  I E     G +V+                    I V G      
Sbjct: 3   GKV-IVYGGKGALGSAILEFFKKNGYTVLNIDLSAN-------DQADSNILVDGNKNWTE 54

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQD 131
             Q        +  +  ++D V   A       +  +      D +   +V SS +  + 
Sbjct: 55  QEQSILEQT-ASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKL 113

Query: 132 AAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMA---PDTRVNCVA 188
           A  HL+ G  + L  + A   P  SM  YG+ K A+  LT +LAA+ +    ++ V  + 
Sbjct: 114 ATTHLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIM 173

Query: 189 PGFVPT 194
           P  + T
Sbjct: 174 PVTLDT 179

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score =  103 bits (257), Expect = 2e-27
 Identities = 54/208 (25%), Positives = 90/208 (43%), Gaps = 24/208 (11%)

Query: 14  VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK--LKARGIEVIGVVCHVS 71
            A++T   + IG  IA RL  +G  VVV  R  +   + +V     AR    +     +S
Sbjct: 3   AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLS 62

Query: 72  NGQQR----KNLINQTIEKFGKIDVVVSNAAANPSV----------DSILQTKESVLDKL 117
                    +++I+ +   FG+ DV+V+NA+A               +  +  ++ + +L
Sbjct: 63  LSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAEL 122

Query: 118 WDINVKSSILLLQDAAPHLQKGSS-------VVLISSIAGYQPQSSMAMYGVTKTALLGL 170
           +  N  + + L++  A    +G +       VV +       P     +Y + K AL GL
Sbjct: 123 FGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGGL 182

Query: 171 TKALAAEMAPD-TRVNCVAPGFVPTHFA 197
           T+A A E+AP   RVN VAPG      A
Sbjct: 183 TRAAALELAPRHIRVNAVAPGLSLLPPA 210

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 90.9 bits (224), Expect = 8e-23
 Identities = 37/208 (17%), Positives = 72/208 (34%), Gaps = 23/208 (11%)

Query: 13  KVAIVTASTQGIGFGIAERL---GLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
              ++T   +G+G G+ + L         +  + R ++   + +  L      +  +   
Sbjct: 3   NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQA-KELEDLAKNHSNIHILEID 61

Query: 70  VSNGQ--QRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
           + N     +     + + K   ++V+ +NA   P    I   +   L      N    I+
Sbjct: 62  LRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIM 121

Query: 128 LLQDAAPHLQKGSSVVLIS-------------SIAGYQ---PQSSMAMYGVTKTALLGLT 171
           L +   P L+K +                   SI G         M  Y  +K+AL   T
Sbjct: 122 LAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAAT 181

Query: 172 KALAAEMAPD-TRVNCVAPGFVPTHFAE 198
           K+L+ ++ P       + PG+V T    
Sbjct: 182 KSLSVDLYPQRIMCVSLHPGWVKTDMGG 209

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score = 85.1 bits (209), Expect = 1e-20
 Identities = 47/202 (23%), Positives = 90/202 (44%), Gaps = 7/202 (3%)

Query: 9   RFQGKVAIVT--ASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGV 66
             +GK  ++   A+ + I +GIA+    +GA++  +   +  +++ V  +          
Sbjct: 2   FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNSPYVY 60

Query: 67  VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPS---VDSILQTKESVLDKLWDINVK 123
              VS  +  K+L N   +  G +D +V + A  P      S+L+T +S  +   +I+V 
Sbjct: 61  ELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVY 120

Query: 124 SSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-T 182
           S I L     P L  G+SV+ +S +   +  +   + G+ K AL    + LA ++     
Sbjct: 121 SLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYLAVDLGKHHI 180

Query: 183 RVNCVAPGFVPTHFAEYITSND 204
           RVN ++ G + T  +  I    
Sbjct: 181 RVNALSAGPIRTLASSGIADFR 202

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 71.2 bits (173), Expect = 9e-16
 Identities = 27/193 (13%), Positives = 61/193 (31%), Gaps = 4/193 (2%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           +VA++   T  +G G+A RL   G  +VV SR+++  +    + +    +         +
Sbjct: 2   RVALLGG-TGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNED 60

Query: 73  GQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLD-KLWDINVKSSILLLQD 131
             +  ++   TI     ID              +          K +  + + S   +  
Sbjct: 61  AAEACDIAVLTIPWEHAIDTARDLKNILREKIVVSPLVPVSRGAKGFTYSSERSAAEIVA 120

Query: 132 AAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RVNCVAPG 190
                +K  S +     A +        + V        +K +   +  +   +  +  G
Sbjct: 121 EVLESEKVVSALHTIPAARFANLDEKFDWDVPVCGDDDESKKVVMSLISEIDGLRPLDAG 180

Query: 191 FVPT-HFAEYITS 202
            +      E +T 
Sbjct: 181 PLSNSRLVESLTP 193

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score = 70.8 bits (172), Expect = 2e-15
 Identities = 43/213 (20%), Positives = 79/213 (37%), Gaps = 40/213 (18%)

Query: 14  VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK-LKARG------------ 60
           VA+VT + + +G  IAE L  EG +V +   +      A+   L AR             
Sbjct: 4   VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 63

Query: 61  ------IEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKE--- 111
                 +        V+   +   L+      +G+ DV+V+NA++      +   ++   
Sbjct: 64  NVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHE 123

Query: 112 ----------SVLDKLWDINVKSSILLL------QDAAPHLQKGSSVVLISSIAGY--QP 153
                     +    L+  N  +   L+          P   +G++  +I+ +     QP
Sbjct: 124 PCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP 183

Query: 154 QSSMAMYGVTKTALLGLTKALAAEMAPDTRVNC 186
                +Y + K AL GLT++ A E+AP      
Sbjct: 184 LLGYTIYTMAKGALEGLTRSAALELAPLQIRVN 216

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 69.5 bits (168), Expect = 1e-14
 Identities = 37/232 (15%), Positives = 76/232 (32%), Gaps = 38/232 (16%)

Query: 11  QGKVAIVT--ASTQGIGFGIAERLGLEGASVVVSSR-----------KQKNVDEAVVKLK 57
              +  +     T G G+GIA+ L      ++               K    D  ++  K
Sbjct: 1   NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDK 60

Query: 58  ARGIEVIGVV---------------------CHVSNGQQRKNLINQTIEKFGKIDVVV-S 95
            + + ++ ++                      ++      +++ N   +K+GKI+++V S
Sbjct: 61  DKKMNILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHS 120

Query: 96  NAAANPSVDSILQTKESVLDKLWDINVKSSILLLQ-DAAPHLQKGSSVVLISSIAGYQPQ 154
            A A      +L T           +  S I L +        + S + L    +     
Sbjct: 121 LANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSIISLTYHASQKVVP 180

Query: 155 SSMAMYGVTKTALLGLTKALAAEMAPDT--RVNCVAPGFVPTHFAEYITSND 204
                    K AL   T+ LA  +  +   R+N ++ G + +  A  I   +
Sbjct: 181 GYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLN 232

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 66.5 bits (161), Expect = 8e-14
 Identities = 36/224 (16%), Positives = 62/224 (27%), Gaps = 57/224 (25%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
            + +++    GIG    + L   G  +V    +                    V+  +S 
Sbjct: 2   SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE-----------------VIADLST 44

Query: 73  GQQRKNLINQTIEKFGK-IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQD 131
            + RK  I   + K  K +D +V  A   P           VL  +  +N   +  L+  
Sbjct: 45  AEGRKQAIADVLAKCSKGMDGLVLCAGLGPQTK--------VLGNVVSVNYFGATELMDA 96

Query: 132 AAPH-----------------------------LQKGSSVVLISSIAGYQ-PQSSMAMYG 161
             P                                +        +I  +   Q     Y 
Sbjct: 97  FLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYA 156

Query: 162 VTKTALLGLTKALA-AEMAPDTRVNCVAPGFVPTHFAEYITSND 204
            +K AL    +  A A      R+N +APG   T   +    + 
Sbjct: 157 GSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDP 200

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score = 63.6 bits (153), Expect = 9e-13
 Identities = 33/197 (16%), Positives = 58/197 (29%), Gaps = 7/197 (3%)

Query: 9   RFQGKVAIVT--ASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK-LKARGIEVIG 65
              GK  +V+   +   I F IA     +GA +V++   +  + + +   L A+   +  
Sbjct: 3   LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLEL 62

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSS 125
            V +  +       + + I    K+D VV +    P     +              +  S
Sbjct: 63  DVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHIS 122

Query: 126 ILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAA----EMAPD 181
                  A  L    +         + P  +M  Y     A   L               
Sbjct: 123 AYSYASMAKALLPIMNPGGSIVGMDFDPSRAMPAYNWMTVAKSALESVNRFVAREAGKYG 182

Query: 182 TRVNCVAPGFVPTHFAE 198
            R N VA G + T    
Sbjct: 183 VRSNLVAAGPIRTLAMS 199

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 61.2 bits (147), Expect = 6e-12
 Identities = 29/187 (15%), Positives = 55/187 (29%), Gaps = 4/187 (2%)

Query: 9   RFQ-GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
            ++     +VT  T G+G  IA  L   GA  ++   +     +   +L A    +    
Sbjct: 5   EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGART 64

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
              +     +  + + +   G    + +   A  ++D       +          K    
Sbjct: 65  TVAACDVTDRESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGA 124

Query: 128 LLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCV 187
                       ++ VL SS A       +  Y      L GL +   ++  P      V
Sbjct: 125 RNLHELTRELDLTAFVLFSSFASAFGAPGLGGYAPGNAYLDGLAQQRRSDGLP---ATAV 181

Query: 188 APGFVPT 194
           A G    
Sbjct: 182 AWGTWAG 188

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 57.6 bits (138), Expect = 6e-11
 Identities = 25/183 (13%), Positives = 45/183 (24%), Gaps = 17/183 (9%)

Query: 3   KMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIE 62
                   +GK A+V A T  +G   A  L  EGA VV+  RK      A   +  R   
Sbjct: 14  VKAAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFK- 72

Query: 63  VIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINV 122
           V       ++   R                V +  A    +       ++       I +
Sbjct: 73  VNVTAAETADDASRAEA-------VKGAHFVFTAGAIGLELLP-----QAAWQNESSIEI 120

Query: 123 KSSILLLQDAAP---HLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMA 179
            +                            G      +    + +  +  L ++      
Sbjct: 121 VADYNAQPPLGIGGIDATDKGKEYGGKRAFGALGIGGLK-LKLHRACIAKLFESSEGVFD 179

Query: 180 PDT 182
            + 
Sbjct: 180 AEE 182

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 58.6 bits (140), Expect = 6e-11
 Identities = 11/59 (18%), Positives = 23/59 (38%), Gaps = 4/59 (6%)

Query: 4  MKMAKRFQGKVAIVT--ASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG 60
          + +    +GK A +   A   G G+ +A+ L   GA ++V +             + + 
Sbjct: 2  LPI--DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKF 58

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 42.5 bits (99), Expect = 2e-05
 Identities = 31/171 (18%), Positives = 57/171 (33%), Gaps = 27/171 (15%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVV-----SSRKQKNVDEAVVKLKARGIEVIGVV 67
           KVA++T  T   G  +AE L  +G  V       SS   + VD           +     
Sbjct: 2   KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHY 61

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
             +S+     + + + + +  + D V +  A +    S    +        D++   ++ 
Sbjct: 62  GDLSD----TSNLTRILREV-QPDEVYNLGAMSHVAVSFESPEY-----TADVDAMGTLR 111

Query: 128 LLQDAAPH-LQKGSSVVLISSIAGY-----------QPQSSMAMYGVTKTA 166
           LL+      L+K +     S+   Y            P    + Y V K  
Sbjct: 112 LLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLY 162

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.6 bits (84), Expect = 0.002
 Identities = 31/194 (15%), Positives = 66/194 (34%), Gaps = 49/194 (25%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVV----SSRKQKNVDEAVVKLKARGIEVIGVVC 68
           K  ++T     +G  + ++L ++G  V V     + +++NV+  +               
Sbjct: 2   KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWI--------------- 46

Query: 69  HVSNGQQRKNLINQTI--EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSI 126
               G +   LIN  +    + ++D +  + A+  S  + +        K    N   ++
Sbjct: 47  ----GHENFELINHDVVEPLYIEVDQIY-HLASPASPPNYMYNPI----KTLKTNTIGTL 97

Query: 127 LLLQDAAPHLQKGSSVVLISSIAGY----------------QPQSSMAMYGVTKTALLGL 170
            +L  A    + G+ ++L S+   Y                 P    A Y   K     +
Sbjct: 98  NMLGLAK---RVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETM 154

Query: 171 TKALAAEMAPDTRV 184
             A   +   + RV
Sbjct: 155 CYAYMKQEGVEVRV 168

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	226
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	100.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	100.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	100.0
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	100.0
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	100.0
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	100.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	100.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	100.0
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	100.0
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	100.0
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	100.0
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	100.0
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	100.0
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	100.0
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	100.0
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	100.0
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	100.0
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	100.0
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	100.0
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	100.0
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	100.0
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	100.0
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	100.0
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	100.0
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	100.0
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	100.0
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	100.0
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	100.0
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.98
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.85
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.85
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.79
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.77
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.77
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.77
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.75
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.72
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.71
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.71
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.7
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.7
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.69
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.69
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.69
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.67
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.67
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.67
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.67
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.65
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.64
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.61
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.6
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.57
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.35
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.34
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.34
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.19
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.16
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.1
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	99.1
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.09
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	98.5
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	98.41
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	98.38
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	98.33
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	98.29
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	98.28
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	98.28
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.2
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	98.19
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	98.0
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	98.0
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.99
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.95
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.95
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.93
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.89
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.88
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.82
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.8
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.79
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.77
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.64
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	97.62
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.6
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.6
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.54
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.54
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.5
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	97.45
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.41
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	97.35
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.33
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.33
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.3
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	97.27
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	97.24
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	97.21
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.21
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	97.19
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.17
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	97.17
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	97.14
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.13
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.13
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.1
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	97.09
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	97.08
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	97.08
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.06
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	97.03
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	97.01
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	97.0
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.99
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	96.98
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.97
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.96
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.94
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	96.93
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	96.93
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	96.91
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	96.9
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.9
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	96.77
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	96.71
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	96.71
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	96.68
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	96.66
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.64
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	96.61
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	96.59
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	96.53
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	96.44
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	96.43
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	96.42
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	96.38
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.34
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	96.33
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	96.32
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	96.32
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	96.24
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	96.21
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	96.19
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	96.19
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	96.17
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	96.11
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.1
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	96.09
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	96.06
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	95.97
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	95.96
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	95.95
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	95.94
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	95.9
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	95.88
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	95.86
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	95.85
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	95.72
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	95.72
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	95.71
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	95.69
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	95.48
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	95.48
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	95.41
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.4
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	95.38
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	95.35
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	95.23
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	95.01
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	95.01
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	94.89
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	94.87
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	94.8
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	94.66
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	94.66
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	94.65
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	94.55
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	94.42
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	94.39
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	94.38
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	94.33
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	94.22
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	94.21
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	94.12
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	94.0
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	93.96
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	93.81
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	93.73
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	93.67
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	93.66
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	93.66
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	93.65
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	93.52
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	93.34
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	93.19
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	92.95
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	92.9
d2fr1a2	209	Erythromycin synthase, eryAI, 1st ketoreductase mo	92.85
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	92.84
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	92.79
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	92.74
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	92.69
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	92.66
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	92.56
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	92.48
d2gh1a1	281	Methyltransferase BC2162 {Bacillus cereus [TaxId:	92.36
d2q4oa1	183	Hypothetical protein At2g37210/T2N18.3 {Thale cres	92.35
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	92.31
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	92.19
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	92.19
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	92.17
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	92.02
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	91.93
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	91.91
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	91.83
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	91.79
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	91.37
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	91.26
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	91.26
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	91.25
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	91.18
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	91.16
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	91.08
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	91.01
d1m1na_	477	Nitrogenase iron-molybdenum protein, alpha chain {	90.97
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	90.96
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	90.88
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	90.74
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	90.71
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	90.64
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	90.62
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	90.52
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	90.47
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	90.05
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	90.03
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	90.01
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	89.95
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	89.76
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	89.76
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	89.71
d1t35a_	179	Hypothetical protein YvdD {Bacillus subtilis [TaxI	89.67
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	89.41
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	89.37
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	89.34
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	89.29
d1wg8a2	182	TM0872, methyltransferase domain {Thermus thermoph	89.03
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	88.82
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	88.82
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	88.67
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	88.37
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	88.35
d2f5va1	379	Pyranose 2-oxidase {White-rot fungus (Peniophora s	88.19
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	88.08
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	88.03
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	87.58
d1ydhb_	181	Hypothetical protein At5g11950 {Thale cress (Arabi	87.54
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	87.1
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	86.9
d1peya_	119	Sporulation response regulator Spo0F {Bacillus sub	86.61
d2ex4a1	222	Adrenal gland protein AD-003 (C9orf32) {Human (Hom	86.55
d1trba2	126	Thioredoxin reductase {Escherichia coli [TaxId: 56	86.33
d1vdca2	130	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	86.31
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	86.14
d1qkia1	203	Glucose 6-phosphate dehydrogenase, N-terminal doma	85.9
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	85.9
d2b3ta1	274	N5-glutamine methyltransferase, HemK {Escherichia	85.85
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	85.84
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	85.84
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	85.65
d1w4xa2	235	Phenylacetone monooxygenase {Thermobifida fusca [T	85.53
d1fl2a2	126	Alkyl hydroperoxide reductase subunit F (AhpF), C-	85.53
d1susa1	227	Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag	85.17
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	85.1
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	84.96
d1pn3a_	391	TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi	84.77
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	84.74
d1h9aa1	195	Glucose 6-phosphate dehydrogenase, N-terminal doma	84.72
d2gmha1	380	Electron transfer flavoprotein-ubiquinone oxidored	84.47
d2fhpa1	182	Putative methylase EF2452 {Enterococcus faecalis [	84.47
d2cl5a1	214	Catechol O-methyltransferase, COMT {Rat (Rattus no	84.42
d2o14a2	208	Hypothetical protein YxiM {Bacillus subtilis [TaxI	84.01
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	83.87
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	83.84
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	83.58
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	83.48
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	83.3
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	83.17
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	83.05
d1mioa_	525	Nitrogenase iron-molybdenum protein, alpha chain {	82.67
d1v71a1	318	Hypothetical protein C320.14 (SPCC320.14, SPCC330.	82.51
d1pvva2	163	Ornithine transcarbamoylase {Archaeon Pyrococcus f	82.5
d1miob_	457	Nitrogenase iron-molybdenum protein, beta chain {C	82.49
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	82.13
d1tw3a2	253	Carminomycin 4-O-methyltransferase {Streptomyces p	82.11
d3lada1	229	Dihydrolipoamide dehydrogenase {Azotobacter vinela	82.09
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	81.87
d1zx0a1	229	Guanidinoacetate methyltransferase {Human (Homo sa	81.76
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	81.73
d1c4oa2	174	Nucleotide excision repair enzyme UvrB {Thermus th	81.63
d1wbha1	213	KDPG aldolase {Escherichia coli [TaxId: 562]}	81.43
d2afhe1	289	Nitrogenase iron protein {Azotobacter vinelandii [	80.52
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	80.29
d1kpia_	291	CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}	80.2
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	80.07

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=2.6e-52  Score=334.51  Aligned_cols=219  Identities=27%  Similarity=0.415  Sum_probs=198.4

Q ss_pred             cccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus         6 ~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      ..++++||++|||||++|||++++++|+++|++|++++|+++++++..+++.+.+.++..+.+|++++++++++++++.+
T Consensus         4 ~~f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   83 (251)
T d2c07a1           4 YYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILT   83 (251)
T ss_dssp             CCCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999999999999999998888999999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHh
Q 027248           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVT  163 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~s  163 (226)
                      ++|++|+||||||... ..++.+.+.++|++++++|+.++++++++++|+|++  .|+||++||..+..+.++.++|++|
T Consensus        84 ~~g~iDilvnnag~~~-~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~as  162 (251)
T d2c07a1          84 EHKNVDILVNNAGITR-DNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSS  162 (251)
T ss_dssp             HCSCCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHH
T ss_pred             hcCCceeeeecccccc-ccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCCCHHHHHH
Confidence            9999999999999876 678899999999999999999999999999999953  5899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC--chhhhhhccCCCCCchhhhccc
Q 027248          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN--DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       164 Kaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      |+|+++|+|+|+.|+++ |||||+|+||+++|+|.+...++  ..+...++.+++.+|+|+|.++
T Consensus       163 Kaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v  227 (251)
T d2c07a1         163 KAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIISNIPAGRMGTPEEVANLA  227 (251)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHHHHTTCTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccccCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            99999999999999999 99999999999999998776432  3345667788899999999875

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=6.4e-52  Score=332.89  Aligned_cols=217  Identities=27%  Similarity=0.418  Sum_probs=199.7

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      ++.|+||+++||||++|||++++++|+++|++|++++|+++++++..+++.+.+.++.++++|++++++++++++++.++
T Consensus         6 ~m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~   85 (255)
T d1fmca_           6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISK   85 (255)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            35689999999999999999999999999999999999999999999999998889999999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhH
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTK  164 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sK  164 (226)
                      +|++|+||||||+.. ..++ +.+.++|++++++|+.|+++++++++|+|++  +++||++||.++..+.++.++|++||
T Consensus        86 ~g~iDilvnnAG~~~-~~~~-e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~~~~~Y~asK  163 (255)
T d1fmca_          86 LGKVDILVNNAGGGG-PKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSK  163 (255)
T ss_dssp             HSSCCEEEECCCCCC-CCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHH
T ss_pred             cCCCCEeeeCCcCCC-CCcc-cCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccccccccchhHH
Confidence            999999999999875 3444 7899999999999999999999999999965  56899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCc---hhhhhhccCCCCCchhhhccc
Q 027248          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND---GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       165 aa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +|+.+|+|+|+.|+++ |||||+|+||+++|++.+....++   .+.+..+..++..|+|+|.++
T Consensus       164 aal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA~~v  228 (255)
T d1fmca_         164 AAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAA  228 (255)
T ss_dssp             HHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSSCSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            9999999999999998 999999999999999987765443   345566778899999999875

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1.7e-51  Score=329.65  Aligned_cols=217  Identities=31%  Similarity=0.471  Sum_probs=197.6

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhc-CCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      ++++||++|||||++|||+++++.|+++|++|++++|+++++++..+++.+. +.++.++.+|++++++++++++++.++
T Consensus         1 f~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (251)
T d1vl8a_           1 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK   80 (251)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999999999999988887544 678899999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCC-cCCCCCCchhhHh
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAG-YQPQSSMAMYGVT  163 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~-~~~~~~~~~Y~~s  163 (226)
                      +|++|+||||||+.. ..++.+.+.++|++++++|+.++++++|+++|+|++  .|+||+++|..+ ..+.++..+|++|
T Consensus        81 ~g~iDiLVnnAG~~~-~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~~~~~Y~as  159 (251)
T d1vl8a_          81 FGKLDTVVNAAGINR-RHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAAS  159 (251)
T ss_dssp             HSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHHH
T ss_pred             cCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCccccchHHH
Confidence            999999999999875 689999999999999999999999999999999965  579999999765 4477889999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch----hhhhhccCCCCCchhhhccc
Q 027248          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG----VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       164 Kaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~----~~~~~~~~~~~~p~~~a~av  225 (226)
                      |+|+.+|+|+|+.|+++ |||||+|+||+++|+|.+....+.+    +.+..+.+++.+|+|+|+++
T Consensus       160 Kaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v  226 (251)
T d1vl8a_         160 KGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVA  226 (251)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHHHH
T ss_pred             HHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence            99999999999999999 9999999999999999987765533    44566778899999999875

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=1.5e-51  Score=331.56  Aligned_cols=217  Identities=31%  Similarity=0.472  Sum_probs=200.9

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      ++++||++|||||++|||+++++.|+++|++|++++|+++++++..+++.+.+.++.++.+|++++++++++++++.+++
T Consensus         4 f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (259)
T d2ae2a_           4 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHF   83 (259)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHh
Confidence            57899999999999999999999999999999999999999999999999988899999999999999999999999998


Q ss_pred             C-CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhH
Q 027248           88 G-KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTK  164 (226)
Q Consensus        88 ~-~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sK  164 (226)
                      + ++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|+|++  .|+||++||..+..+.|+...|++||
T Consensus        84 ~~~idilvnnAG~~~-~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asK  162 (259)
T d2ae2a_          84 HGKLNILVNNAGIVI-YKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATK  162 (259)
T ss_dssp             TTCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCceEEEECCceec-cCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccccccccchHHHH
Confidence            6 7999999999876 678999999999999999999999999999999954  58999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCc-------hhhhhhccCCCCCchhhhccc
Q 027248          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND-------GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       165 aa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~-------~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +|+++|+|+|+.|+++ |||||+|+||+|+|+|.+......       .+....+.+++.+|+|+|+++
T Consensus       163 aal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~pedvA~~v  231 (259)
T d2ae2a_         163 GAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMV  231 (259)
T ss_dssp             HHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            9999999999999999 999999999999999987765542       234556778899999999875

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=1.8e-51  Score=331.22  Aligned_cols=219  Identities=28%  Similarity=0.375  Sum_probs=199.6

Q ss_pred             cccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcc-hHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHH
Q 027248            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK-NVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTI   84 (226)
Q Consensus         6 ~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (226)
                      |..+|+||+++||||++|||++++++|+++|++|++++|+.+ .++...+++.+.+.++..+++|++++++++++++++.
T Consensus         1 M~~dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~   80 (261)
T d1geea_           1 MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAI   80 (261)
T ss_dssp             CCGGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            345799999999999999999999999999999999999865 6778888888888899999999999999999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc---CCEEEEEeccCCcCCCCCCchhh
Q 027248           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYG  161 (226)
Q Consensus        85 ~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~---~~~iv~~sS~~~~~~~~~~~~Y~  161 (226)
                      +++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|+|++   +++||++||.++..+.|+..+|+
T Consensus        81 ~~~G~iDiLVnnAG~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~~~~Y~  159 (261)
T d1geea_          81 KEFGKLDVMINNAGLEN-PVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYA  159 (261)
T ss_dssp             HHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHH
T ss_pred             HHhCCCCEeeccceecC-CcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCccccccc
Confidence            99999999999999876 678999999999999999999999999999999954   24699999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch----hhhhhccCCCCCchhhhccc
Q 027248          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG----VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       162 ~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~----~~~~~~~~~~~~p~~~a~av  225 (226)
                      +||+|+.+|+|+|+.|+++ |||||+|+||+++||+.......++    +....+..++.+|+|+|+++
T Consensus       160 asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v  228 (261)
T d1geea_         160 ASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVA  228 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHHH
T ss_pred             cCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence            9999999999999999999 9999999999999999877654433    44556778899999999875

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=5.2e-52  Score=331.22  Aligned_cols=213  Identities=26%  Similarity=0.460  Sum_probs=196.3

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      ||+||+++||||++|||+++++.|+++|++|++++|+++++++..+++.   .+...+.+|++++++++++++++.+++|
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   77 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLG---ANGKGLMLNVTDPASIESVLEKIRAEFG   77 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG---GGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC---CCCcEEEEEecCHHHhhhhhhhhhcccC
Confidence            5899999999999999999999999999999999999999998888774   4677889999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa  166 (226)
                      ++|+||||||... .+++.+.+.++|++++++|+.++++++|+++|+|++  .|+||++||..+..+.++.++|++||+|
T Consensus        78 ~iDilVnnAg~~~-~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaa  156 (243)
T d1q7ba_          78 EVDILVNNAGITR-DNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAG  156 (243)
T ss_dssp             SCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHH
T ss_pred             Ccceehhhhhhcc-ccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCCCHHHHHHHHH
Confidence            9999999999876 688999999999999999999999999999999943  6899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC--chhhhhhccCCCCCchhhhccc
Q 027248          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN--DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       167 ~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +++|+|+|+.|+++ |||||+|+||+++|+|.+...++  ..+....+.+++.+|+|+|+++
T Consensus       157 l~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v  218 (243)
T d1q7ba_         157 LIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGRLGGAQEIANAV  218 (243)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHTTCTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHhCccCeEEEEEecceEechhhhhhhhhHHHHHHhcCCCCCCCCHHHHHHHH
Confidence            99999999999999 99999999999999998776543  2345667788899999999875

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=1.5e-51  Score=331.22  Aligned_cols=217  Identities=24%  Similarity=0.365  Sum_probs=196.8

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      .|+||++|||||++|||+++++.|+++|++|++++|+++++++..+++.+.  +.++..+++|++++++++++++++.++
T Consensus         1 rl~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   80 (258)
T d1iy8a_           1 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER   80 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHH
Confidence            378999999999999999999999999999999999999999998888765  346889999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhh--cCCEEEEEeccCCcCCCCCCchhhHhH
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTK  164 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~--~~~~iv~~sS~~~~~~~~~~~~Y~~sK  164 (226)
                      +|++|+||||||+.....++.+.+.++|++++++|+.++++++|+++|+|+  +.|+||++||..+..+.|+..+|++||
T Consensus        81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asK  160 (258)
T d1iy8a_          81 FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAK  160 (258)
T ss_dssp             HSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHHHH
T ss_pred             hCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCCCchHHHHHH
Confidence            999999999999876567899999999999999999999999999999985  468999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC----------chhhhhhccCCCCCchhhhccc
Q 027248          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN----------DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       165 aa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~----------~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +|+.+|+|+|+.|+++ |||||+|+||+++|||.+.....          +.+....+.+++.+|+|+|+++
T Consensus       161 aal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~p~dvA~~v  232 (258)
T d1iy8a_         161 HGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVV  232 (258)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            9999999999999999 99999999999999987655321          1234455778899999999875

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=3.1e-51  Score=329.60  Aligned_cols=218  Identities=29%  Similarity=0.424  Sum_probs=172.5

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      .++++||++|||||++|||+++++.|+++|++|++++|+++++++..+++.+.+.++..+.+|++++++++++++++.++
T Consensus         3 ~F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (259)
T d1xq1a_           3 RWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSM   82 (259)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHH
Confidence            35679999999999999999999999999999999999999999999999988889999999999999999999999999


Q ss_pred             h-CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHh
Q 027248           87 F-GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVT  163 (226)
Q Consensus        87 ~-~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~s  163 (226)
                      + |++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++  .|+||++||..+..+.++..+|++|
T Consensus        83 ~~g~idilvnnAG~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~as  161 (259)
T d1xq1a_          83 FGGKLDILINNLGAIR-SKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSAT  161 (259)
T ss_dssp             HTTCCSEEEEECCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHHH
T ss_pred             hCCCcccccccccccC-CCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccccccccccccccccccccccccccccc
Confidence            8 68999999999876 688999999999999999999999999999999953  5899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCc---hhhhhhccCCCCCchhhhccc
Q 027248          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND---GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       164 Kaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~p~~~a~av  225 (226)
                      |+|+.+|+|+|+.|+++ |||||+|+||+++|||.+....++   .+....+.+++.+|+|+|.++
T Consensus       162 Kaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v  227 (259)
T d1xq1a_         162 KGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLV  227 (259)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-------------------------CCGGGGHHHH
T ss_pred             ccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchHHHHHHHHhCCCCCCCcCHHHHHHHH
Confidence            99999999999999999 999999999999999988765443   244566778899999999875

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=2.4e-51  Score=330.58  Aligned_cols=217  Identities=25%  Similarity=0.449  Sum_probs=198.7

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      .|+||++|||||++|||+++++.|+++|++|++++|+++++++..+++.+.+.++..+.+|++++++++++++++.+++|
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFG   81 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            47899999999999999999999999999999999999999999999998888999999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhh--cCCEEEEEeccCCcCCCCCCchhhHhHHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~--~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa  166 (226)
                      ++|+||||||......++.+.+.++|++++++|+.++++++++++|+|+  +.|+||++||..+..+.|+.++|++||+|
T Consensus        82 ~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaa  161 (260)
T d1zema1          82 KIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGA  161 (260)
T ss_dssp             CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHHHH
T ss_pred             CCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcchHHHHHHHHH
Confidence            9999999999876567899999999999999999999999999999984  46899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCceeCCccccccc-------------C-----chhhhhhccCCCCCchhhhccc
Q 027248          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS-------------N-----DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       167 ~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~-------------~-----~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +.+|+|+|+.|+++ |||||+|+||+|+|+|......             .     ..+...++.+++.+|+|+|.++
T Consensus       162 l~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedvA~~v  239 (260)
T d1zema1         162 IIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVV  239 (260)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGGGSHHHH
T ss_pred             HHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            99999999999999 9999999999999998643211             0     1234556788899999999875

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=1.3e-50  Score=323.82  Aligned_cols=214  Identities=28%  Similarity=0.398  Sum_probs=182.3

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      .|+||+++||||++|||+++++.|+++|++|++++|++.+  ...+.+.+.+.++.++.+|++++++++++++++.+++|
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~--~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G   79 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAP--EAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFG   79 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCH--HHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchH--HHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999999999999999998764  34455666678899999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa  166 (226)
                      ++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|+|++  .|+||++||..+..+.++.++|++||+|
T Consensus        80 ~iDilVnnAG~~~-~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaa  158 (247)
T d2ew8a1          80 RCDILVNNAGIYP-LIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAA  158 (247)
T ss_dssp             CCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHHHH
T ss_pred             CCCEEEECCCCCC-CCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCcccccchhhhcc
Confidence            9999999999876 788999999999999999999999999999999954  5899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchhh----hhhccCCCCCchhhhccc
Q 027248          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVV----SSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       167 ~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~----~~~~~~~~~~p~~~a~av  225 (226)
                      +.+|+|+|+.|+++ |||||+|+||+++|++.+....+....    ...+.+++.+|+|+|.++
T Consensus       159 l~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~l~r~~~pedvA~~v  222 (247)
T d2ew8a1         159 NIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAA  222 (247)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECCC------------------CTTSSSCSCCCTHHHHHHH
T ss_pred             HHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccchhHHHHHHHhccCCCCCCHHHHHHHH
Confidence            99999999999999 999999999999999987665443221    122456789999999875

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=3.9e-51  Score=328.96  Aligned_cols=213  Identities=29%  Similarity=0.444  Sum_probs=196.3

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id   91 (226)
                      ||++|||||++|||++++++|+++|++|++++|+++++++..+++.+.+.++.++++|++++++++++++++.+++|++|
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iD   81 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVD   81 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            89999999999999999999999999999999999999999999998888999999999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhh--hc--CCEEEEEeccCCcCCCCCCchhhHhHHHH
Q 027248           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHL--QK--GSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (226)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l--~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~  167 (226)
                      +||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|  ++  .++||++||..+..+.++..+|++||+|+
T Consensus        82 ilVnnAG~~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~~~~Y~asKaal  160 (257)
T d2rhca1          82 VLVNNAGRPG-GGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGV  160 (257)
T ss_dssp             EEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred             EEEecccccC-CCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccccchhHHHHHHHH
Confidence            9999999876 6889999999999999999999999999999974  22  47999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC-------------chhhhhhccCCCCCchhhhccc
Q 027248          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN-------------DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       168 ~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~-------------~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      .+|+|+|+.|+++ |||||+|+||+++|||.+.....             +.+...++.+++.+|+|+|.++
T Consensus       161 ~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~PlgR~~~pedia~~v  232 (257)
T d2rhca1         161 VGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMV  232 (257)
T ss_dssp             HHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            9999999999999 99999999999999997664321             2234566778899999999875

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=9.8e-51  Score=327.12  Aligned_cols=215  Identities=28%  Similarity=0.437  Sum_probs=189.1

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCc-chHHHHHHHHHhc-CCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ-KNVDEAVVKLKAR-GIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~-~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      ++||++|||||++|||++++++|+++|++|++++|++ +.+++..+++.+. +.++.++.+|++++++++++++++.+++
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            5899999999999999999999999999999999975 5677777777554 6689999999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHH
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKT  165 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKa  165 (226)
                      |++|+||||||+.. ..++.+.+.++|+++|++|+.++++++++++|+|++  .|+||++||..+..+.|+.++|++||+
T Consensus        82 G~iDiLVnnAG~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKa  160 (260)
T d1x1ta1          82 GRIDILVNNAGIQH-TALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKH  160 (260)
T ss_dssp             SCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCCcEEEeeccccc-CCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccCCcchhhhhhh
Confidence            99999999999876 688999999999999999999999999999999964  579999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC--------------chhhhhhccCCCCCchhhhccc
Q 027248          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN--------------DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       166 a~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~--------------~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      |+.+|+|+|+.|+++ ||+||+|+||+++|||.+.....              +.+....+.+++.+|+|+|+++
T Consensus       161 al~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v  235 (260)
T d1x1ta1         161 GVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTA  235 (260)
T ss_dssp             HHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHHHHHHH
T ss_pred             hHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            999999999999998 99999999999999998765421              2245667788999999999875

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=9.7e-51  Score=323.70  Aligned_cols=210  Identities=26%  Similarity=0.382  Sum_probs=193.2

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      .|+||+++||||++|||+++++.|+++|++|++++|+++++++..+++.   .++.++++|++++++++++++++.+++|
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   79 (244)
T d1nffa_           3 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA---DAARYVHLDVTQPAQWKAAVDTAVTAFG   79 (244)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG---GGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh---CcceEEEeecCCHHHHHHHHHHHHHHhC
Confidence            5889999999999999999999999999999999999998888877764   4678899999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa  166 (226)
                      ++|+||||||... ..++.+.+.++|++++++|+.+++++++++.|+|++  .|+||++||..+..+.++..+|++||+|
T Consensus        80 ~idilinnAG~~~-~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaa  158 (244)
T d1nffa_          80 GLHVLVNNAGILN-IGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFA  158 (244)
T ss_dssp             CCCEEEECCCCCC-CBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred             CCeEEEECCcccC-CCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccccccchhhHHHH
Confidence            9999999999876 688999999999999999999999999999999954  5899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       167 ~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +++|+|+|+.|+++ |||||+|+||+++|||.+.....   ....+..++.+|+|+|+++
T Consensus       159 l~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~---~~~~pl~R~~~p~diA~~v  215 (244)
T d1nffa_         159 VRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPED---IFQTALGRAAEPVEVSNLV  215 (244)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTT---CSCCSSSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhHH---HHhccccCCCCHHHHHHHH
Confidence            99999999999999 99999999999999998765332   3456778899999999875

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=9.7e-51  Score=325.51  Aligned_cols=213  Identities=24%  Similarity=0.328  Sum_probs=193.5

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      +|+||++|||||++|||++++++|+++|++|++++|+++++++..+++   +.++.++++|++++++++++++++.+++|
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   78 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDAARYQHLDVTIEEDWQRVVAYAREEFG   78 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCceEEEEcccCCHHHHHHHHHHHHHHcC
Confidence            689999999999999999999999999999999999998887776665   45788999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa  166 (226)
                      ++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|+|++  .|+||++||..+..+.++.++|++||+|
T Consensus        79 ~iDilVnnAg~~~-~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaa  157 (254)
T d1hdca_          79 SVDGLVNNAGIST-GMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWG  157 (254)
T ss_dssp             CCCEEEECCCCCC-CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CccEEEecCcccc-ccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccccchhhHHHHHHH
Confidence            9999999999876 688999999999999999999999999999999854  6899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC--chhhhhhccCCCC-Cchhhhccc
Q 027248          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN--DGVVSSVSSLKLS-PPSSLTLAV  225 (226)
Q Consensus       167 ~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~-~p~~~a~av  225 (226)
                      +.+|+|+|+.|+++ |||||+|+||+++|+|......+  ....+..+..++. +|+|||.++
T Consensus       158 l~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~g~~PedvA~~v  220 (254)
T d1hdca_         158 VRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAV  220 (254)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCSTTSCTTSTTSSCB-CHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCceEEEEeeeCcccCccchhcCHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence            99999999999998 99999999999999998766543  2344556666775 799999875

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.5e-51  Score=326.33  Aligned_cols=213  Identities=30%  Similarity=0.446  Sum_probs=191.6

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      .|+||++|||||++|||+++++.|+++|++|++++|+++.+++..+++    .++.++.+|++++++++++++++.+++|
T Consensus         3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~----~~~~~~~~Dvs~~~~v~~~~~~~~~~~g   78 (250)
T d1ydea1           3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL----PGAVFILCDVTQEDDVKTLVSETIRRFG   78 (250)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC----TTEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc----CCCeEEEccCCCHHHHHHHHHHHHHhcC
Confidence            478999999999999999999999999999999999988877766554    4678899999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc-CCEEEEEeccCCcCCCCCCchhhHhHHHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-GSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~-~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~  167 (226)
                      ++|+||||||......++++.+.++|++++++|+.++++++++++|+|++ +|+||++||..+..+.++..+|++||+|+
T Consensus        79 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal  158 (250)
T d1ydea1          79 RLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQAVPYVATKGAV  158 (250)
T ss_dssp             CCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTTCHHHHHHHHHH
T ss_pred             CCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccccccccccCcchhHHHHhhH
Confidence            99999999998765677889999999999999999999999999999965 58999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCc--------hhhhhhccCCCCCchhhhccc
Q 027248          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND--------GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       168 ~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~--------~~~~~~~~~~~~~p~~~a~av  225 (226)
                      .+|+|+|+.|+++ |||||+|+||+|+|||.+......        ......+..++.+|+|+|+++
T Consensus       159 ~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eva~~v  225 (250)
T d1ydea1         159 TAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAA  225 (250)
T ss_dssp             HHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence            9999999999999 999999999999999987654321        122344667899999999875

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=1.5e-50  Score=325.03  Aligned_cols=212  Identities=30%  Similarity=0.429  Sum_probs=195.5

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCE
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~   92 (226)
                      |++|||||++|||++++++|+++|++|++++|+++++++..+++.+.+.++.++++|++++++++++++++.+++|++|+
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV   81 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            78899999999999999999999999999999999999999999998889999999999999999999999999999999


Q ss_pred             EEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc---CCEEEEEeccCCcCCCCCCchhhHhHHHHHH
Q 027248           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALLG  169 (226)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~---~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~  169 (226)
                      ||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|.+   .++|+++||.++..+.|+.+.|++||+|+.+
T Consensus        82 lVnnAG~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~  160 (255)
T d1gega_          82 IVNNAGVAP-STPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRG  160 (255)
T ss_dssp             EEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred             EEecccccc-cCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcccccchhCHHHHHh
Confidence            999999876 688999999999999999999999999999998743   4689999999999999999999999999999


Q ss_pred             HHHHHHHHhCC-CeEEEEEecCceeCCcccccccC-------------chhhhhhccCCCCCchhhhccc
Q 027248          170 LTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN-------------DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       170 ~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~-------------~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      |+|+|+.|+++ |||||+|+||+++|||.......             ..+.+.++.+++.+|+|+|+++
T Consensus       161 ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v  230 (255)
T d1gega_         161 LTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACV  230 (255)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHH
T ss_pred             hHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            99999999999 99999999999999987665321             2234566788999999999875

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=2e-50  Score=324.47  Aligned_cols=213  Identities=24%  Similarity=0.419  Sum_probs=193.6

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      .|+||+++||||++|||+++++.|+++|++|++++|+++++++..+++   +.++..+.+|++++++++++++++.+++|
T Consensus         2 ~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~---~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g   78 (256)
T d1k2wa_           2 RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI---GPAACAIALDVTDQASIDRCVAELLDRWG   78 (256)
T ss_dssp             TTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCceEEEEeeCCCHHHHHHHHHHHHHHhC
Confidence            378999999999999999999999999999999999999888888776   56788999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhh-h--cCCEEEEEeccCCcCCCCCCchhhHhHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHL-Q--KGSSVVLISSIAGYQPQSSMAMYGVTKT  165 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l-~--~~~~iv~~sS~~~~~~~~~~~~Y~~sKa  165 (226)
                      ++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.| +  +.|+||++||..+..+.++.++|++||+
T Consensus        79 ~iDilVnnAg~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKa  157 (256)
T d1k2wa_          79 SIDILVNNAALFD-LAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKA  157 (256)
T ss_dssp             CCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CccEEEeeccccc-ccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccccccchhhhhh
Confidence            9999999999876 6889999999999999999999999999999976 3  2579999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC-------------chhhhhhccCCCCCchhhhccc
Q 027248          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN-------------DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       166 a~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~-------------~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      |+.+|+|+|+.|+++ |||||+|+||+++||+.+.....             ..+...++.+++.+|+|+|.++
T Consensus       158 al~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~p~evA~~v  231 (256)
T d1k2wa_         158 AVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMA  231 (256)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            999999999999999 99999999999999997654321             2234556778999999999875

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=4.3e-50  Score=321.57  Aligned_cols=215  Identities=24%  Similarity=0.377  Sum_probs=195.1

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      .|+||++|||||++|||+++++.|+++|++|++++|+++.+++..+++.. +.++.++.+|++++++++++++++.+++|
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT-PDQIQFFQHDSSDEDGWTKLFDATEKAFG   81 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC-CCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            38899999999999999999999999999999999999999888888754 45788999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcC---CEEEEEeccCCcCCCCCCchhhHhHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKG---SSVVLISSIAGYQPQSSMAMYGVTKT  165 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~---~~iv~~sS~~~~~~~~~~~~Y~~sKa  165 (226)
                      ++|+||||||... .+++.+.+.++|++++++|+.++++++++++|+|++.   ++||++||..+..+.|+..+|++||+
T Consensus        82 ~iDiLVnnAg~~~-~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~~~~Y~asKa  160 (251)
T d1zk4a1          82 PVSTLVNNAGIAV-NKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKG  160 (251)
T ss_dssp             SCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CceEEEecccccc-ccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCCchhHHHHHH
Confidence            9999999999986 6889999999999999999999999999999999652   48999999999999999999999999


Q ss_pred             HHHHHHHHHHHH--hCC-CeEEEEEecCceeCCcccccccCch---hhhhhccCCCCCchhhhccc
Q 027248          166 ALLGLTKALAAE--MAP-DTRVNCVAPGFVPTHFAEYITSNDG---VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       166 a~~~~~~~la~e--~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~---~~~~~~~~~~~~p~~~a~av  225 (226)
                      |+.+|+|+|+.|  +.+ |||||+|+||+++|+|.+.....+.   .....+.+++.+|+|+|+++
T Consensus       161 al~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v  226 (251)
T d1zk4a1         161 AVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYIC  226 (251)
T ss_dssp             HHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCTTSSCBCHHHHHHHH
T ss_pred             HHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCHHHHHHHHhCCCCCCCcCHHHHHHHH
Confidence            999999999999  456 9999999999999999887665433   23445677899999999875

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=8.2e-50  Score=317.89  Aligned_cols=205  Identities=20%  Similarity=0.339  Sum_probs=190.7

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCe-------EEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGAS-------VVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~-------v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      +++|||||++|||++++++|+++|++       |++.+|+++++++..+++.+.+.++.++.+|++++++++++++++.+
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE   81 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            46899999999999999999999998       99999999999999999998888999999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHh
Q 027248           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVT  163 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~s  163 (226)
                      ++|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++  +|+||++||.++..+.|+.+.|++|
T Consensus        82 ~~g~iDilvnnAg~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~as  160 (240)
T d2bd0a1          82 RYGHIDCLVNNAGVGR-FGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMS  160 (240)
T ss_dssp             HTSCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             HcCCcceeeccccccc-CCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCCCChHHHHH
Confidence            9999999999999876 689999999999999999999999999999999954  5899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       164 Kaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      |+|+.+|+|+|+.|+++ |||||+|+||+++|+|.+......       ..++.+|+|+|++|
T Consensus       161 K~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~~~~-------~~~~~~PedvA~~v  216 (240)
T d2bd0a1         161 KFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDEM-------QALMMMPEDIAAPV  216 (240)
T ss_dssp             HHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCSTT-------GGGSBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcCHhh-------HhcCCCHHHHHHHH
Confidence            99999999999999999 999999999999999987764332       23567899999875

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=1.9e-50  Score=322.30  Aligned_cols=212  Identities=27%  Similarity=0.428  Sum_probs=194.3

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEe-cCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCC
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSS-RKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id   91 (226)
                      +++|||||++|||++++++|+++|++|++.+ |+++.+++..+++...+.++.++++|++++++++++++++.+++|++|
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   81 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            7899999999999999999999999998875 566778888888888888999999999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhh--cCCEEEEEeccCCcCCCCCCchhhHhHHHHHH
Q 027248           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTALLG  169 (226)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~--~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~  169 (226)
                      +||||||... ..++.+.+.++|++++++|+.|+++++++++|+|+  ++|+||++||..+..+.++.++|++||+|+.+
T Consensus        82 iLVnnAg~~~-~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~~  160 (244)
T d1edoa_          82 VVVNNAGITR-DTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIG  160 (244)
T ss_dssp             EEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHH
T ss_pred             cccccccccc-ccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCCCHHHHHHHHHHHH
Confidence            9999999876 68899999999999999999999999999999994  46899999999999999999999999999999


Q ss_pred             HHHHHHHHhCC-CeEEEEEecCceeCCcccccccC--chhhhhhccCCCCCchhhhccc
Q 027248          170 LTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN--DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       170 ~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      |+|+|+.|+++ |||||+|+||+++|+|.+.+..+  +.+....+.+++.+|+|+|.++
T Consensus       161 ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~R~~~p~dvA~~v  219 (244)
T d1edoa_         161 FSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRTGQPENVAGLV  219 (244)
T ss_dssp             HHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHHHHHHHTSCTTCSCBCHHHHHHHH
T ss_pred             ChHHHHHHHhhhCcEEEEEecceeccHHHHHhhHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            99999999998 99999999999999998776433  2345566778899999999875

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1e-49  Score=317.72  Aligned_cols=210  Identities=23%  Similarity=0.352  Sum_probs=187.0

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      +++||++|||||++|||++++++|+++|++|++++|+++++++..+++     +..++.+|++++++++++++++.+++|
T Consensus         2 ~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~g   76 (242)
T d1ulsa_           2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-----GAHPVVMDVADPASVERGFAEALAHLG   76 (242)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----TCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCeEEEEecCCHHHHHHHHHHHHHhcC
Confidence            478999999999999999999999999999999999998887776654     356789999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcC--CEEEEEeccCCcCCCCCCchhhHhHHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKG--SSVVLISSIAGYQPQSSMAMYGVTKTA  166 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~--~~iv~~sS~~~~~~~~~~~~Y~~sKaa  166 (226)
                      ++|+||||||+.. ..++.+.+.++|++++++|+.|+++++|+++|+|+++  +.|+++|| .+..+.++..+|++||+|
T Consensus        77 ~iDilVnnAG~~~-~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss-~~~~~~~~~~~Y~asKaa  154 (242)
T d1ulsa_          77 RLDGVVHYAGITR-DNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTAS-RVYLGNLGQANYAASMAG  154 (242)
T ss_dssp             SCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECC-GGGGCCTTCHHHHHHHHH
T ss_pred             CceEEEECCcccc-cCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeecc-ccccCCCCCcchHHHHHH
Confidence            9999999999876 6889999999999999999999999999999999653  45555555 567788999999999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC--chhhhhhccCCCCCchhhhccc
Q 027248          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN--DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       167 ~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +.+|+|+|+.|+++ |||||+|+||+++|++.+.....  +.+....+.+++.+|+|+|.+|
T Consensus       155 l~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v  216 (242)
T d1ulsa_         155 VVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVREKAIAATPLGRAGKPLEVAYAA  216 (242)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHHHHHHHTCTTCSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCCHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence            99999999999999 99999999999999998776432  3355667888999999999875

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.5e-49  Score=317.70  Aligned_cols=210  Identities=26%  Similarity=0.386  Sum_probs=187.1

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      .|+||++|||||++|||++++++|+++|++|++++|+++..+ ..+++     ...++++|++++++++++++++.+++|
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~-~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~G   75 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKE-VAEAI-----GGAFFQVDLEDERERVRFVEEAAYALG   75 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHH-HHHHH-----TCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHc-----CCeEEEEeCCCHHHHHHHHHHHHHhcC
Confidence            478999999999999999999999999999999999987643 33333     245689999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa  166 (226)
                      ++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++  .|+||++||..+..+.++..+|++||+|
T Consensus        76 ~iDiLVnnAG~~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaa  154 (248)
T d2d1ya1          76 RVDVLVNNAAIAA-PGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGG  154 (248)
T ss_dssp             CCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHHH
T ss_pred             CCCeEEEeCcCCC-CCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccccccchhHHHHHH
Confidence            9999999999876 688999999999999999999999999999999965  5799999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC--------chhhhhhccCCCCCchhhhccc
Q 027248          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN--------DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       167 ~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~--------~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +.+|+|+|+.|+++ |||||+|+||+++||+.+.....        ..+....+.+++.+|+|+|+++
T Consensus       155 l~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v  222 (248)
T d2d1ya1         155 LVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAV  222 (248)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            99999999999999 99999999999999987654321        2244556778899999999875

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=4.4e-49  Score=316.83  Aligned_cols=217  Identities=30%  Similarity=0.476  Sum_probs=193.8

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      ++++||++|||||++|||++++++|+++|++|++++|+++++++..+++.+.+.++.++.+|++++++++++++++.+++
T Consensus         2 f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   81 (258)
T d1ae1a_           2 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVF   81 (258)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHh
Confidence            57899999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             -CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhH
Q 027248           88 -GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTK  164 (226)
Q Consensus        88 -~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sK  164 (226)
                       +.+|+||||||... ..++.+.+.++|++++++|+.+++.+++++.|.|++  .|+||++||..+..+.++..+|+++|
T Consensus        82 ~g~idilinnag~~~-~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK  160 (258)
T d1ae1a_          82 DGKLNILVNNAGVVI-HKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASK  160 (258)
T ss_dssp             TSCCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCcEEEeccccccc-cCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccccccchhHHHHH
Confidence             68999999999886 678999999999999999999999999999999854  68999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC--------chhhhhhccCCCCCchhhhccc
Q 027248          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN--------DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       165 aa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~--------~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +|+++|+|.|+.|+++ |||||+|+||+++|||.+.....        ..+....+.+++.+|+|+|.++
T Consensus       161 ~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plgR~~~pediA~~v  230 (258)
T d1ae1a_         161 GAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALI  230 (258)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            9999999999999999 99999999999999998776543        2244556778899999999875

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1.2e-49  Score=316.34  Aligned_cols=205  Identities=23%  Similarity=0.439  Sum_probs=179.0

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      +|+||++|||||++|||++++++|+++|++|++++|+++..           .++..+++|++++++++++++++.+++|
T Consensus         4 sl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~-----------~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   72 (237)
T d1uzma1           4 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP-----------KGLFGVEVDVTDSDAVDRAFTAVEEHQG   72 (237)
T ss_dssp             CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC-----------TTSEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchh-----------cCceEEEEecCCHHHHHHHHHHHHHhcC
Confidence            68999999999999999999999999999999999998754           2466789999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa  166 (226)
                      ++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|+|++  .++||++||..+..+.++..+|++||+|
T Consensus        73 ~iDiLVnnAG~~~-~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa  151 (237)
T d1uzma1          73 PVEVLVSNAGLSA-DAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAG  151 (237)
T ss_dssp             SCSEEEEECSCCC------CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHHHH
T ss_pred             CceEEEeeecccc-cccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCcccHHHHHHHHH
Confidence            9999999999876 688999999999999999999999999999999954  4699999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC--chhhhhhccCCCCCchhhhccc
Q 027248          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN--DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       167 ~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +++|+|+|+.|+++ |||||+|+||+++|+|.+.+.+.  +...+.++..++.+|+|+|+++
T Consensus       152 l~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v  213 (237)
T d1uzma1         152 VIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVV  213 (237)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHHHHHHHGGGCTTCSCBCHHHHHHHH
T ss_pred             HHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            99999999999998 99999999999999998765432  3356677888999999999875

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=6.7e-49  Score=317.01  Aligned_cols=217  Identities=30%  Similarity=0.473  Sum_probs=182.5

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcC---CcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG---IEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      .|+||++|||||++|||++++++|+++|++|++++|+++++++..+++.+.+   .++.++.+|++++++++++++++.+
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   81 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999999999999999998764   3588999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCC---CCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc-CCEEEEEeccC-CcCCCCCCchh
Q 027248           86 KFGKIDVVVSNAAANPS---VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-GSSVVLISSIA-GYQPQSSMAMY  160 (226)
Q Consensus        86 ~~~~id~li~nag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~-~~~iv~~sS~~-~~~~~~~~~~Y  160 (226)
                      ++|++|+||||||+...   ...+.+.+.++|++++++|+.++++++++++|+|++ ++++|+++|.. +..+.|+.++|
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~~~~~~~~Y  161 (264)
T d1spxa_          82 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPYY  161 (264)
T ss_dssp             HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSCCTTSHHH
T ss_pred             HhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeeccccccCCCchhh
Confidence            99999999999998632   335667789999999999999999999999999965 57777777765 56788999999


Q ss_pred             hHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch-----------hhhhhccCCCCCchhhhccc
Q 027248          161 GVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG-----------VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       161 ~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~-----------~~~~~~~~~~~~p~~~a~av  225 (226)
                      ++||+|+++|+|+|+.|+++ |||||+|+||+++|+|.+.....+.           +.+..+.+++.+|+|+|+++
T Consensus       162 ~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedvA~~v  238 (264)
T d1spxa_         162 SIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVI  238 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCHHHHHHHH
T ss_pred             hhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            99999999999999999999 9999999999999999876543321           23556778999999999875

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=2e-49  Score=318.00  Aligned_cols=213  Identities=23%  Similarity=0.300  Sum_probs=191.1

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      .|+||++|||||++|||+++++.|+++|++|++++|+++++++..+++   +.+..++++|++++++++++++++.+++|
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g   79 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GERSMFVRHDVSSEADWTLVMAAVQRRLG   79 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCCeEEEEeecCCHHHHHHHHHHHHHHhC
Confidence            478999999999999999999999999999999999999988888777   45688899999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc-CCEEEEEeccCCcCCCCCCchhhHhHHHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-GSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~-~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~  167 (226)
                      ++|+||||||+.. ..++.+.+.++|++++++|+.++|+++++++|+|++ +|+||++||..+..+.++.++|++||+|+
T Consensus        80 ~iDilVnnAG~~~-~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal  158 (253)
T d1hxha_          80 TLNVLVNNAGILL-PGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIEQYAGYSASKAAV  158 (253)
T ss_dssp             SCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred             CCCeEEecccccC-CCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhcCccccccccchhHHH
Confidence            9999999999876 678999999999999999999999999999999965 68999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCC---CeEEEEEecCceeCCcccccccCchhh-------hhhccCCCCCchhhhccc
Q 027248          168 LGLTKALAAEMAP---DTRVNCVAPGFVPTHFAEYITSNDGVV-------SSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       168 ~~~~~~la~e~~~---~i~v~~v~Pg~v~t~~~~~~~~~~~~~-------~~~~~~~~~~p~~~a~av  225 (226)
                      .+|+|+|+.|+++   +||||+|+||+++|++.+...++....       ...+.+++.+|+|+|.++
T Consensus       159 ~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v  226 (253)
T d1hxha_         159 SALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLV  226 (253)
T ss_dssp             HHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHHHHHHHH
T ss_pred             HHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhHHHHHhCccccccCCCCCHHHHHHHH
Confidence            9999999999975   499999999999999987665443221       112334678899999875

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-49  Score=315.92  Aligned_cols=209  Identities=22%  Similarity=0.343  Sum_probs=190.8

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      .+++||+++||||++|||++++++|+++|++|++++|+++++++..+++...+.++.++.||++++++++.+++++.+++
T Consensus         3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   82 (244)
T d1yb1a_           3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI   82 (244)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999999999999999999999999999989999999999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHH
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKT  165 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKa  165 (226)
                      |.+|+||||||... ...+.+.+.++|++++++|+.|+++++++++|+|++  .|+||++||..+..+.|++++|++||+
T Consensus        83 g~idilinnag~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKa  161 (244)
T d1yb1a_          83 GDVSILVNNAGVVY-TSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKF  161 (244)
T ss_dssp             CCCSEEEECCCCCC-CCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHHHH
T ss_pred             CCCceeEeeccccc-cccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCCCcHHHHHHHH
Confidence            99999999999987 577889999999999999999999999999999955  479999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC----CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          166 ALLGLTKALAAEMAP----DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       166 a~~~~~~~la~e~~~----~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      |+.+|+++|+.|+++    ||+||+|+||+|+|+|.+...        ....+..+|+++|+.+
T Consensus       162 al~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~~--------~~~~~~~~pe~va~~i  217 (244)
T d1yb1a_         162 AAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPS--------TSLGPTLEPEEVVNRL  217 (244)
T ss_dssp             HHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCTH--------HHHCCCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCcC--------ccccCCCCHHHHHHHH
Confidence            999999999999742    899999999999999876531        1234567888888754

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=9.6e-49  Score=315.43  Aligned_cols=219  Identities=26%  Similarity=0.348  Sum_probs=194.7

Q ss_pred             cccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhc-CCcEEEEEeeCCCHHHHHHHHHHHH
Q 027248            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCHVSNGQQRKNLINQTI   84 (226)
Q Consensus         6 ~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (226)
                      |+++|+||++|||||++|||+++++.|+++|++|++++|+++++++..+++.+. +.++.++++|++++++++++++++.
T Consensus         3 ~~m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~   82 (260)
T d1h5qa_           3 FTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQID   82 (260)
T ss_dssp             EEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHH
Confidence            566899999999999999999999999999999999999999999888887554 6789999999999999999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc---CCEEEEEeccCCcC-------CC
Q 027248           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQ-------PQ  154 (226)
Q Consensus        85 ~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~---~~~iv~~sS~~~~~-------~~  154 (226)
                      +++|++|+||||||+.. ..++.+.+.++|++++++|+.|++++++++.|+|.+   .++|++.+|.....       +.
T Consensus        83 ~~~g~iDilVnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~~~  161 (260)
T d1h5qa_          83 ADLGPISGLIANAGVSV-VKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGS  161 (260)
T ss_dssp             HHSCSEEEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEE
T ss_pred             HHhCCCcEecccccccc-cCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccccccC
Confidence            99999999999999876 688999999999999999999999999999999832   45777777776543       23


Q ss_pred             CCCchhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC--chhhhhhccCCCCCchhhhccc
Q 027248          155 SSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN--DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       155 ~~~~~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ++..+|++||+|+.+|+|+|+.|+++ |||||+|+||+++|++......+  +.+...++.+++.+|+|+|.++
T Consensus       162 ~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~R~g~pedvA~~v  235 (260)
T d1h5qa_         162 LTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNIPLNRFAQPEEMTGQA  235 (260)
T ss_dssp             CSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHTCTTSSCBCGGGGHHHH
T ss_pred             ccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            57789999999999999999999998 99999999999999998776432  2355667788999999999875

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=3.8e-48  Score=313.22  Aligned_cols=216  Identities=29%  Similarity=0.410  Sum_probs=190.4

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      .|+||++|||||++|||++++++|+++|++|++++|+++++++..+++...+ .+.++.+|++++++++++++++.+++|
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPD-VISFVHCDVTKDEDVRNLVDTTIAKHG   81 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTT-TEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCC-ceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999999999999999999999999999999988886543 577889999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCC-CccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCC-chhhHhH
Q 027248           89 KIDVVVSNAAANPSV-DSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSM-AMYGVTK  164 (226)
Q Consensus        89 ~id~li~nag~~~~~-~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~-~~Y~~sK  164 (226)
                      ++|+||||||+.... ..+.+.+.++|++++++|+.|+++++|+++|+|++  .|+||++||..+..+.++. .+|++||
T Consensus        82 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~~Y~asK  161 (268)
T d2bgka1          82 KLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATK  161 (268)
T ss_dssp             CCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHHHHH
T ss_pred             CcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccccccccccchhH
Confidence            999999999986532 35788999999999999999999999999999954  5799999999998876664 4899999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchhh-------hhhccCCCCCchhhhccc
Q 027248          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVV-------SSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       165 aa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~-------~~~~~~~~~~p~~~a~av  225 (226)
                      +|+++|+|+|+.|+++ |||||+|+||+++|||...........       ...+..++.+|+|||+++
T Consensus       162 aal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v  230 (268)
T d2bgka1         162 HAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAV  230 (268)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHH
T ss_pred             HHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccccCCCCcCHHHHHHHH
Confidence            9999999999999999 999999999999999988776543211       122456799999999875

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=2.5e-48  Score=315.15  Aligned_cols=217  Identities=30%  Similarity=0.449  Sum_probs=193.0

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCC---cEEEEEeeCCCHHHHHHHHHHHHH
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI---EVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      .|+||+++||||++|||++++++|+++|++|++++|+++++++..+++.+.+.   ++..+.+|++++++++++++++.+
T Consensus         1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (274)
T d1xhla_           1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA   80 (274)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHH
Confidence            37899999999999999999999999999999999999999999999987643   588999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCC-CCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhH
Q 027248           86 KFGKIDVVVSNAAANPS-VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGV  162 (226)
Q Consensus        86 ~~~~id~li~nag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~  162 (226)
                      ++|++|+||||||.... .....+.+.++|++++++|+.++++++++++|+|++  +++|+++||.++..+.++.++|++
T Consensus        81 ~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~~~~~Y~a  160 (274)
T d1xhla_          81 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYAC  160 (274)
T ss_dssp             HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTSHHHHH
T ss_pred             HcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCCCCceehh
Confidence            99999999999997642 335566788999999999999999999999999954  468888888888889999999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch-----------hhhhhccCCCCCchhhhccc
Q 027248          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG-----------VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       163 sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~-----------~~~~~~~~~~~~p~~~a~av  225 (226)
                      ||+|+.+|+|+|+.|+++ |||||+|+||+|+||+.........           ....++.+++.+|+|+|.++
T Consensus       161 sKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPlgR~g~pediA~~v  235 (274)
T d1xhla_         161 AKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANII  235 (274)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCCCCCcCHHHHHHHH
Confidence            999999999999999999 9999999999999998876543321           12345778899999999875

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-48  Score=312.06  Aligned_cols=211  Identities=27%  Similarity=0.373  Sum_probs=188.3

Q ss_pred             cccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus         6 ~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      |+..++||++|||||++|||++++++|+++|++|++++|++++++++.+++.    .+..+.+|+++++++++++    +
T Consensus         1 M~~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~----~~~~~~~Dv~d~~~v~~~~----~   72 (244)
T d1pr9a_           1 MELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP----GIEPVCVDLGDWEATERAL----G   72 (244)
T ss_dssp             CCCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHH----T
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC----CCeEEEEeCCCHHHHHHHH----H
Confidence            4567899999999999999999999999999999999999988887776653    4678899999999987665    4


Q ss_pred             HhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhh-hc--CCEEEEEeccCCcCCCCCCchhhH
Q 027248           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHL-QK--GSSVVLISSIAGYQPQSSMAMYGV  162 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l-~~--~~~iv~~sS~~~~~~~~~~~~Y~~  162 (226)
                      ++|++|+||||||... ..++.+.+.++|++++++|+.++++++++++|.| ++  .|+||++||..+..+.|+..+|++
T Consensus        73 ~~g~iDilVnnAg~~~-~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~a  151 (244)
T d1pr9a_          73 SVGPVDLLVNNAAVAL-LQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCS  151 (244)
T ss_dssp             TCCCCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHH
T ss_pred             HhCCceEEEecccccc-ccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccchhhhhh
Confidence            5799999999999976 6899999999999999999999999999999975 32  589999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch----hhhhhccCCCCCchhhhccc
Q 027248          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG----VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       163 sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~----~~~~~~~~~~~~p~~~a~av  225 (226)
                      ||+|+++|+|+|+.|+++ |||||+|+||+++|++.+....+..    +...++.+++.+|+|+|+++
T Consensus       152 sKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v  219 (244)
T d1pr9a_         152 TKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAI  219 (244)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTTCSCBCHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            999999999999999999 9999999999999999887765543    34556778899999999875

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=3.5e-48  Score=314.00  Aligned_cols=217  Identities=30%  Similarity=0.439  Sum_probs=190.4

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcC---CcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG---IEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      .|+||++|||||++|||+++++.|+++|++|++++|+++++++..+++.+.+   .++.++.+|++++++++++++++.+
T Consensus         2 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~   81 (272)
T d1xkqa_           2 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   81 (272)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            3789999999999999999999999999999999999999999999998764   3688999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCC---CCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc-CCEEEEEec-cCCcCCCCCCchh
Q 027248           86 KFGKIDVVVSNAAANPS---VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-GSSVVLISS-IAGYQPQSSMAMY  160 (226)
Q Consensus        86 ~~~~id~li~nag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~-~~~iv~~sS-~~~~~~~~~~~~Y  160 (226)
                      ++|++|+||||||....   .....+.+.++|++++++|+.++++++++++|+|++ ++++|+++| .++..+.++..+|
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~~~~~~~Y  161 (272)
T d1xkqa_          82 QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYY  161 (272)
T ss_dssp             HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCCSSHHH
T ss_pred             HhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccccCCCCcchh
Confidence            99999999999998753   123356778899999999999999999999999954 466666666 5678899999999


Q ss_pred             hHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch-----------hhhhhccCCCCCchhhhccc
Q 027248          161 GVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG-----------VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       161 ~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~-----------~~~~~~~~~~~~p~~~a~av  225 (226)
                      ++||+|+.+|+|+|+.|+++ |||||+|+||+|+|+|.+.....+.           ....++.+++.+|+|+|.++
T Consensus       162 ~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pediA~~v  238 (272)
T d1xkqa_         162 AIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANII  238 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCCCCCcCHHHHHHHH
Confidence            99999999999999999998 9999999999999999877654432           22345677899999999875

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=4e-48  Score=311.21  Aligned_cols=220  Identities=23%  Similarity=0.268  Sum_probs=187.5

Q ss_pred             ccccccCCCEEEEEcCCC--chhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHH
Q 027248            5 KMAKRFQGKVAIVTASTQ--GIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQ   82 (226)
Q Consensus         5 ~~~~~~~gk~vlItGa~~--giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   82 (226)
                      ||+.+++||++|||||+|  |||++++++|+++|++|++.+|+++..+. .++....+.+..++++|+++++++++++++
T Consensus         1 M~~~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   79 (256)
T d1ulua_           1 MLTVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPE-AEKLAEALGGALLFRADVTQDEELDALFAG   79 (256)
T ss_dssp             CEEECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHHHHHHTTCCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHH-HHHhhhccCcccccccccCCHHHHHHHHHH
Confidence            577899999999999987  99999999999999999999998755444 444555556777899999999999999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCC---CCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCch
Q 027248           83 TIEKFGKIDVVVSNAAANPS---VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAM  159 (226)
Q Consensus        83 ~~~~~~~id~li~nag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~  159 (226)
                      +.+++|++|+||||||+...   ..++.+.+.++|+..+++|+.+++.+++++.|+|+++|+||++||..+..+.|+..+
T Consensus        80 ~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~~~~~~  159 (256)
T d1ulua_          80 VKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKYNV  159 (256)
T ss_dssp             HHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTTCHH
T ss_pred             HHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCCCCCchH
Confidence            99999999999999998642   335678889999999999999999999999999998999999999999999999999


Q ss_pred             hhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch----hhhhhccCCCCCchhhhccc
Q 027248          160 YGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG----VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       160 Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~----~~~~~~~~~~~~p~~~a~av  225 (226)
                      |++||+|+++|+|+|+.|+++ |||||+|+||+++|++.......+.    +.+..+.+++.+|+|+|+++
T Consensus       160 Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v  230 (256)
T d1ulua_         160 MAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLG  230 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHHHHHHHHHHSTTSSCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            999999999999999999999 9999999999999998877654433    44566788899999999875

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2e-48  Score=310.17  Aligned_cols=208  Identities=24%  Similarity=0.352  Sum_probs=186.1

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      +|+||++|||||++|||++++++|+++|++|++++|+++++++..+++    ..+..+.+|+++++++++++    +++|
T Consensus         2 dl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~----~~~~~~~~Dv~~~~~v~~~~----~~~g   73 (242)
T d1cyda_           2 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC----PGIEPVCVDLGDWDATEKAL----GGIG   73 (242)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----TTCEEEECCTTCHHHHHHHH----TTCC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc----CCCeEEEEeCCCHHHHHHHH----HHcC
Confidence            589999999999999999999999999999999999998877766654    35778899999999887665    4579


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhh-hc--CCEEEEEeccCCcCCCCCCchhhHhHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHL-QK--GSSVVLISSIAGYQPQSSMAMYGVTKT  165 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l-~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKa  165 (226)
                      ++|+||||||+.. ..++.+.+.++|++++++|+.+++++++++.|.| ++  +|+||++||..+..+.|+..+|++||+
T Consensus        74 ~iDilVnnAg~~~-~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asKa  152 (242)
T d1cyda_          74 PVDLLVNNAALVI-MQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKG  152 (242)
T ss_dssp             CCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred             CCeEEEECCcccc-chhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCccccccchHH
Confidence            9999999999876 6899999999999999999999999999999975 32  479999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch----hhhhhccCCCCCchhhhccc
Q 027248          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG----VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       166 a~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~----~~~~~~~~~~~~p~~~a~av  225 (226)
                      |+.+|+|+|+.|+++ |||||+|+||+++|+|.+.....++    +....+.+++.+|+|+|+++
T Consensus       153 al~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeva~~v  217 (242)
T d1cyda_         153 AMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSI  217 (242)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            999999999999999 9999999999999999888766543    34556778899999999875

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=1.3e-47  Score=311.16  Aligned_cols=214  Identities=26%  Similarity=0.413  Sum_probs=188.0

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      .++||++|||||++|||++++++|+++|++|++++|+++++++..+++   +.++..+.+|++++++++++++++.+++|
T Consensus         2 ~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g   78 (276)
T d1bdba_           2 KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH---GDNVLGIVGDVRSLEDQKQAASRCVARFG   78 (276)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---CCCeeEEecccccHHHHHHHHHHHHHHhC
Confidence            478999999999999999999999999999999999998888777665   45788999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCc----cccccHHHHHHHHHHHHHHHHHHHHHHhhhhh-cCCEEEEEeccCCcCCCCCCchhhHh
Q 027248           89 KIDVVVSNAAANPSVDS----ILQTKESVLDKLWDINVKSSILLLQDAAPHLQ-KGSSVVLISSIAGYQPQSSMAMYGVT  163 (226)
Q Consensus        89 ~id~li~nag~~~~~~~----~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~-~~~~iv~~sS~~~~~~~~~~~~Y~~s  163 (226)
                      ++|+||||||+......    ..+.+.++|++++++|+.|+++++++++|+|+ ++|+||+++|..+..+.++.+.|++|
T Consensus        79 ~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~g~iI~i~S~~~~~~~~~~~~Y~as  158 (276)
T d1bdba_          79 KIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFYPNGGGPLYTAA  158 (276)
T ss_dssp             CCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSTTSSCHHHHHH
T ss_pred             CcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcCCCceeeeechhccCCCCCchHHHH
Confidence            99999999998653222    34455678999999999999999999999995 46899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCCCeEEEEEecCceeCCcccccccC------------chhhhhhccCCCCCchhhhccc
Q 027248          164 KTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSN------------DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       164 Kaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~~~~~~~------------~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      |+|+.+|+|+|+.|++++||||+|+||+|+|+|.......            +.+...++.+++.+|+|+|.++
T Consensus       159 Kaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeva~~v  232 (276)
T d1bdba_         159 KHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEYTGAY  232 (276)
T ss_dssp             HHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTTSSCCCGGGGSHHH
T ss_pred             HHHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            9999999999999999899999999999999986543321            1234556778899999999865

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-47  Score=312.43  Aligned_cols=220  Identities=27%  Similarity=0.403  Sum_probs=195.2

Q ss_pred             cccccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhc-----CCcEEEEEeeCCCHHHHHH
Q 027248            4 MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-----GIEVIGVVCHVSNGQQRKN   78 (226)
Q Consensus         4 ~~~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~   78 (226)
                      |.-+..|+||++|||||++|||++++++|+++|++|++++|+++++++..+++.+.     +.++..+.+|+++++++++
T Consensus         4 y~~~g~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~   83 (297)
T d1yxma1           4 YLAPGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNN   83 (297)
T ss_dssp             SBCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHH
T ss_pred             CCCCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHH
Confidence            33445689999999999999999999999999999999999999999999888753     5578999999999999999


Q ss_pred             HHHHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCC
Q 027248           79 LINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSS  156 (226)
Q Consensus        79 ~~~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~  156 (226)
                      +++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|++  .++||++|| .+..+.|+
T Consensus        84 ~~~~~~~~~G~iDiLVnnAg~~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss-~~~~~~~~  161 (297)
T d1yxma1          84 LVKSTLDTFGKINFLVNNGGGQF-LSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIV-PTKAGFPL  161 (297)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECC-CCTTCCTT
T ss_pred             HHHHHHHHhCCeEEEEeeccccc-cCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccc-cccccccc
Confidence            99999999999999999999876 688999999999999999999999999999999854  577888865 45567899


Q ss_pred             CchhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC------chhhhhhccCCCCCchhhhccc
Q 027248          157 MAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN------DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       157 ~~~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~------~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ...|++||+|+.+|+|+|+.|+++ |||||+|+||+|+|++.......      +.....++.+++.+|+|+|.+|
T Consensus       162 ~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~plgR~g~pedvA~~v  237 (297)
T d1yxma1         162 AVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVV  237 (297)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHHHHH
T ss_pred             cccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            999999999999999999999998 99999999999999987654432      2234556778899999999875

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-47  Score=305.63  Aligned_cols=217  Identities=25%  Similarity=0.424  Sum_probs=193.9

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcC--CcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG--IEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      .+|+||++|||||++|||+++++.|+++|++|++++|++++++++.+++.+.+  .++.+++||++++++++++++++.+
T Consensus         6 ~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~   85 (257)
T d1xg5a_           6 ERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRS   85 (257)
T ss_dssp             GGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            35899999999999999999999999999999999999999999999998875  4688999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc----CCEEEEEeccCCcCC--CCCCch
Q 027248           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK----GSSVVLISSIAGYQP--QSSMAM  159 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~----~~~iv~~sS~~~~~~--~~~~~~  159 (226)
                      ++|++|+||||||... .+++.+.+.++|++.+++|+.++++++++++|.|++    +|+||++||.++...  .++...
T Consensus        86 ~~g~iD~lVnnAg~~~-~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~~~~~~  164 (257)
T d1xg5a_          86 QHSGVDICINNAGLAR-PDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHF  164 (257)
T ss_dssp             HHCCCSEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHH
T ss_pred             hcCCCCEEEecccccC-CCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCCcccHH
Confidence            9999999999999876 688999999999999999999999999999998843    489999999988654  455677


Q ss_pred             hhHhHHHHHHHHHHHHHHh--CC-CeEEEEEecCceeCCcccccccC--chhhhhhccCCCCCchhhhccc
Q 027248          160 YGVTKTALLGLTKALAAEM--AP-DTRVNCVAPGFVPTHFAEYITSN--DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       160 Y~~sKaa~~~~~~~la~e~--~~-~i~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      |++||+|+.+|+|+|+.|+  ++ ||+||+|+||+++|++.......  +......+..++.+|+|+|+++
T Consensus       165 Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v  235 (257)
T d1xg5a_         165 YSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCLKPEDVAEAV  235 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHHHC---CBCHHHHHHHH
T ss_pred             HHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChhhHHHHHhcCCCCCCcCHHHHHHHH
Confidence            9999999999999999998  56 99999999999999998776544  3456777888999999999875

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=1.4e-47  Score=308.40  Aligned_cols=216  Identities=30%  Similarity=0.483  Sum_probs=193.3

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEec-CcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSR-KQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      .++||++|||||++|||++++++|+++|++|+++++ +++.++...+++.+.+.++.++.+|++++++++++++++.+++
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF   82 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHc
Confidence            588999999999999999999999999999998755 5556788888998889999999999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcC-CCCCCchhhHhHHH
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ-PQSSMAMYGVTKTA  166 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~-~~~~~~~Y~~sKaa  166 (226)
                      |++|+||||||... ..++.+.+.++|++++++|+.++++++++++|+|++++++++++|..+.. +.+++..|++||+|
T Consensus        83 g~idilinnag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~~~~~~~~Y~asK~a  161 (259)
T d1ja9a_          83 GGLDFVMSNSGMEV-WCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPNHALYAGSKAA  161 (259)
T ss_dssp             SCEEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCCSCHHHHHHHHH
T ss_pred             CCCcEEEecccccc-ccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccccCCCCchhHHHHHHH
Confidence            99999999999876 68899999999999999999999999999999998888888888876654 68999999999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC---------------chhhhhhccCCCCCchhhhccc
Q 027248          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN---------------DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       167 ~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~---------------~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +.+|+|+|+.|+++ |||||+|+||+++|+|.+.....               +.+....+..++..|+|||+++
T Consensus       162 l~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eVa~~v  236 (259)
T d1ja9a_         162 VEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAV  236 (259)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCCCCcCHHHHHHHH
Confidence            99999999999999 99999999999999987554321               2234566778899999999875

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=100.00  E-value=1.2e-47  Score=305.61  Aligned_cols=212  Identities=28%  Similarity=0.413  Sum_probs=184.9

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      .|+||++|||||++|||++++++|+++|++|++++|+.+++++..++   .+.++.++++|++++++++++++++.+++|
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g   78 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAA---LEAEAIAVVADVSDPKAVEAVFAEALEEFG   78 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT---CCSSEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH---cCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            47899999999999999999999999999999999999877655544   467889999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHhHHHHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALL  168 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~  168 (226)
                      ++|+||||||... ..++.+.+.++|++++++|+.+++.++++++|+|++++.|+++||.+. .+.|++..|+++|+|++
T Consensus        79 ~iDiLinnAg~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~-~~~~~~~~Y~~sK~al~  156 (241)
T d2a4ka1          79 RLHGVAHFAGVAH-SALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAG-LGAFGLAHYAAGKLGVV  156 (241)
T ss_dssp             CCCEEEEGGGGTT-TTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTT-CCHHHHHHHHHCSSHHH
T ss_pred             CccEecccccccc-ccchhhhhccccccccccccccccccccccccccccccceeecccccc-ccccCccccchhhHHHH
Confidence            9999999999876 688999999999999999999999999999999988777776666654 45588999999999999


Q ss_pred             HHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC--chhhhhhccCCCCCchhhhccc
Q 027248          169 GLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN--DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       169 ~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +|+|+|+.|+++ |||||+|+||+++|+|.+...+.  ..+....+..++.+|+|||+++
T Consensus       157 ~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v  216 (241)
T d2a4ka1         157 GLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGASPLGRAGRPEEVAQAA  216 (241)
T ss_dssp             HHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHHHHHHHHHTSTTCSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhhhHhHHHHHHhCCCCCCCcCHHHHHHHH
Confidence            999999999999 99999999999999998765432  2345667788899999999875

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-47  Score=307.43  Aligned_cols=206  Identities=29%  Similarity=0.457  Sum_probs=185.1

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      .||++|||||++|||++++++|+++|++|++++|+.+++++..+++.+.  +.++.++.+|++++++++++++++.+++|
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            5999999999999999999999999999999999999999999888765  44788999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc-----CCEEEEEeccCCcCCCCCCchhhHh
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-----GSSVVLISSIAGYQPQSSMAMYGVT  163 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~-----~~~iv~~sS~~~~~~~~~~~~Y~~s  163 (226)
                      ++|+||||||...         .++|++++++|+.+++++++.++|+|++     +|+||++||..+..+.++.++|++|
T Consensus        82 ~iDilVnnAg~~~---------~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~as  152 (254)
T d2gdza1          82 RLDILVNNAGVNN---------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCAS  152 (254)
T ss_dssp             CCCEEEECCCCCC---------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             CcCeecccccccc---------cccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCCccchHHH
Confidence            9999999999864         2458999999999999999999999954     3689999999999999999999999


Q ss_pred             HHHHHHHHHH--HHHHhCC-CeEEEEEecCceeCCcccccccCc----------hhhhhhccCCCCCchhhhccc
Q 027248          164 KTALLGLTKA--LAAEMAP-DTRVNCVAPGFVPTHFAEYITSND----------GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       164 Kaa~~~~~~~--la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~----------~~~~~~~~~~~~~p~~~a~av  225 (226)
                      |+|+.+|+|+  |+.|+++ |||||+|+||+|+|+|.+.+....          .+...++..++.+|+|+|+++
T Consensus       153 Kaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v  227 (254)
T d2gdza1         153 KHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGL  227 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            9999999997  7889988 999999999999999987765432          233455677899999999875

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=1.7e-46  Score=304.17  Aligned_cols=218  Identities=26%  Similarity=0.431  Sum_probs=195.6

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCc-chHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ-KNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      ..+++||++|||||++|||+++++.|+++|++|++++|+. +.+++..+++.+.+.++.++.+|++++++++++++++.+
T Consensus        13 ~~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~   92 (272)
T d1g0oa_          13 SASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVK   92 (272)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHH
Confidence            4679999999999999999999999999999999998874 567778888888899999999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCc-CCCCCCchhhHhH
Q 027248           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY-QPQSSMAMYGVTK  164 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~-~~~~~~~~Y~~sK  164 (226)
                      .+|++|++|||+|... ..++.+.+.++|++++++|+.++++++++++|+|++++++++++|..+. .+.++...|++||
T Consensus        93 ~~g~idilV~nag~~~-~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~~~~~~~~Y~asK  171 (272)
T d1g0oa_          93 IFGKLDIVCSNSGVVS-FGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSK  171 (272)
T ss_dssp             HHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCSSCHHHHHHH
T ss_pred             HhCCCCccccccccch-hhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccccccccccccchhhHHHHH
Confidence            9999999999999876 6889999999999999999999999999999999999999999888754 4567788899999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCc---------------hhhhhhccCCCCCchhhhccc
Q 027248          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND---------------GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       165 aa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~---------------~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +|+++|+|+|+.|+++ |||||+|+||+++|++.+....+.               ......+.+++..|+|||.++
T Consensus       172 aal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~peevA~~v  248 (272)
T d1g0oa_         172 GAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVV  248 (272)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCCCCCcCHHHHHHHH
Confidence            9999999999999998 999999999999999876654321               123455678999999999875

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=6.1e-47  Score=303.46  Aligned_cols=206  Identities=21%  Similarity=0.265  Sum_probs=184.4

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCEE
Q 027248           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVV   93 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~l   93 (226)
                      |+|||||++|||+++++.|+++|++|++.+|+.+.++++......      +.++|++++++++++++++.+++|++|+|
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~------~~~~dv~~~~~~~~~~~~~~~~~G~iDiL   75 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAET------YPQLKPMSEQEPAELIEAVTSAYGQVDVL   75 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHH------CTTSEECCCCSHHHHHHHHHHHHSCCCEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCc------EEEeccCCHHHHHHHHHHHHHHcCCCCEE
Confidence            799999999999999999999999999999999888776544332      23579999999999999999999999999


Q ss_pred             EEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHHHHHHH
Q 027248           94 VSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLT  171 (226)
Q Consensus        94 i~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~  171 (226)
                      |||||+....+++.+.+.++|++++++|+.++|+++++++|+|++  .|+||++||.++..+.++..+|++||+|+.+|+
T Consensus        76 VnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~~~~~Y~asKaal~~lt  155 (252)
T d1zmta1          76 VSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLA  155 (252)
T ss_dssp             EEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHHHH
T ss_pred             EECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccccccccccccccccHHHHH
Confidence            999998765678999999999999999999999999999999954  689999999999999999999999999999999


Q ss_pred             HHHHHHhCC-CeEEEEEecCceeCCcccccccC----------chhhhhhccCCCCCchhhhccc
Q 027248          172 KALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN----------DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       172 ~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~----------~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      |+|+.|+++ |||||+|+||+++|++.+.+...          ..+.+..+..++..|+|+|.++
T Consensus       156 ~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA~~v  220 (252)
T d1zmta1         156 NALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELV  220 (252)
T ss_dssp             HHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHHHHHH
T ss_pred             HHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            999999999 99999999999999998765432          1234566778899999999875

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=100.00  E-value=3.8e-46  Score=298.95  Aligned_cols=208  Identities=16%  Similarity=0.215  Sum_probs=179.5

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhc-CCcEEEEEeeCC-CHHHHHHHHHHHHHH
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCHVS-NGQQRKNLINQTIEK   86 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~-~~~~v~~~~~~~~~~   86 (226)
                      +++||+++||||++|||+++|++|+++|++|++++|+.++.+...+..... +.++.++.+|++ +.++++++++++.++
T Consensus         2 ~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   81 (254)
T d1sbya1           2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQ   81 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHH
Confidence            689999999999999999999999999999999999988876654433333 447889999998 567899999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc-----CCEEEEEeccCCcCCCCCCchhh
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-----GSSVVLISSIAGYQPQSSMAMYG  161 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~-----~~~iv~~sS~~~~~~~~~~~~Y~  161 (226)
                      +|++|+||||||..         +.++|++++++|+.|+++++++++|+|.+     .++||++||..+..+.+++..|+
T Consensus        82 ~g~iDilvnnAG~~---------~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~  152 (254)
T d1sbya1          82 LKTVDILINGAGIL---------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYS  152 (254)
T ss_dssp             HSCCCEEEECCCCC---------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHHH
T ss_pred             cCCCCEEEeCCCCC---------CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCCCHHHH
Confidence            99999999999964         35779999999999999999999999943     37899999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch----hhhhhccCCCCCchhhhccc
Q 027248          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG----VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       162 ~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~----~~~~~~~~~~~~p~~~a~av  225 (226)
                      +||+|+.+|+++|+.|+.+ |||||+|+||+|+|+|.+.+.....    +.+.....+..+||++|+++
T Consensus       153 asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~~  221 (254)
T d1sbya1         153 ASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNF  221 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCCEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHHHHhccccCCCCCHHHHHHHH
Confidence            9999999999999999988 9999999999999998776543322    33444556688899998653

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.4e-45  Score=296.67  Aligned_cols=216  Identities=22%  Similarity=0.267  Sum_probs=189.7

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHh---CCCeEEEEecCcchHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHH
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGL---EGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQT   83 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~---~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~   83 (226)
                      .++||++|||||++|||++++++|++   +|++|++++|++++++++.+++...  +.++.++.||++++++++++++.+
T Consensus         3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~   82 (259)
T d1oaaa_           3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence            57899999999999999999999986   7999999999999999999998765  347889999999999999999988


Q ss_pred             HHH----hCCCCEEEEcCCCCC--CCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcC----CEEEEEeccCCcCC
Q 027248           84 IEK----FGKIDVVVSNAAANP--SVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKG----SSVVLISSIAGYQP  153 (226)
Q Consensus        84 ~~~----~~~id~li~nag~~~--~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~----~~iv~~sS~~~~~~  153 (226)
                      .+.    ++.+|++|||||...  ...++.+.+.++|++++++|+.++++++++++|+|++.    ++||++||..+..+
T Consensus        83 ~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~  162 (259)
T d1oaaa_          83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP  162 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC
T ss_pred             HHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCC
Confidence            773    457899999999764  24568899999999999999999999999999999653    58999999999999


Q ss_pred             CCCCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCccccccc---Cc----hhhhhhccCCCCCchhhhccc
Q 027248          154 QSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITS---ND----GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       154 ~~~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~~~~~~~---~~----~~~~~~~~~~~~~p~~~a~av  225 (226)
                      .++++.|++||+|+++|+|+|+.| .+|||||+|+||+|+|+|.+....   ..    .+.+..+..++.+|+|+|+++
T Consensus       163 ~~~~~~Y~asKaal~~lt~~la~e-~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~evA~~i  240 (259)
T d1oaaa_         163 YKGWGLYCAGKAARDMLYQVLAAE-EPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKL  240 (259)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHH-CTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHHHHHHHH
T ss_pred             CccchHHHHHHHHHHHHHHHHHhC-CCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence            999999999999999999999999 459999999999999998765432   11    234445677899999999864

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1e-45  Score=303.19  Aligned_cols=207  Identities=25%  Similarity=0.360  Sum_probs=181.5

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecC---------cchHHHHHHHHHhcCCcEEEEEeeCCCHHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRK---------QKNVDEAVVKLKARGIEVIGVVCHVSNGQQRK   77 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~---------~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~   77 (226)
                      +++|+||++|||||++|||++++++|+++|++|++.+|+         .+.+++..+++...+.   ...+|+++.++++
T Consensus         2 Pm~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~d~~~~~~~~   78 (302)
T d1gz6a_           2 PLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGG---KAVANYDSVEAGE   78 (302)
T ss_dssp             CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTC---EEEEECCCGGGHH
T ss_pred             CcCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhccc---ccccccchHHHHH
Confidence            356899999999999999999999999999999998765         3455666667665543   4568999999999


Q ss_pred             HHHHHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCC
Q 027248           78 NLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQS  155 (226)
Q Consensus        78 ~~~~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~  155 (226)
                      ++++++.+++|++|+||||||+.. .+++.+.+.++|++++++|+.|+++++++++|+|++  .|+||++||..+..+.+
T Consensus        79 ~~v~~~~~~~G~iDiLVnNAGi~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~  157 (302)
T d1gz6a_          79 KLVKTALDTFGRIDVVVNNAGILR-DRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNF  157 (302)
T ss_dssp             HHHHHHHHHTSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT
T ss_pred             HHHHHHHHHcCCCCEEEECCccCC-CCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCCC
Confidence            999999999999999999999986 689999999999999999999999999999999954  58999999999999999


Q ss_pred             CCchhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          156 SMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       156 ~~~~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +...|++||+|+.+|+++|+.|+++ ||+||+|+||++.|++......  ..      .+..+|+|+|.++
T Consensus       158 ~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~~~--~~------~~~~~PedvA~~v  220 (302)
T d1gz6a_         158 GQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVMPE--DL------VEALKPEYVAPLV  220 (302)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGSCH--HH------HHHSCGGGTHHHH
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcCcH--hh------HhcCCHHHHHHHH
Confidence            9999999999999999999999998 9999999999998887554422  11      2345799999865

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=3.1e-45  Score=290.44  Aligned_cols=200  Identities=26%  Similarity=0.405  Sum_probs=176.3

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      ++||++|||||++|||++++++|+++|++|++++|+++.+++       .+  ..++.+|+++.      ++.+.+++++
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~-------~~--~~~~~~Dv~~~------~~~~~~~~g~   66 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKR-------SG--HRYVVCDLRKD------LDLLFEKVKE   66 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-------TC--SEEEECCTTTC------HHHHHHHSCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHh-------cC--CcEEEcchHHH------HHHHHHHhCC
Confidence            689999999999999999999999999999999999765433       22  34567999864      4556778899


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHhHHHH
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~  167 (226)
                      +|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|+|++  .|+||+++|..+..+.++...|++||+|+
T Consensus        67 iD~lVnnAG~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~~~~~Y~asKaal  145 (234)
T d1o5ia_          67 VDILVLNAGGPK-AGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMAL  145 (234)
T ss_dssp             CSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred             CcEEEecccccC-CcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccccccccchhHHHHH
Confidence            999999999875 678999999999999999999999999999999964  57999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCc---hhhhhhccCCCCCchhhhccc
Q 027248          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND---GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       168 ~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~p~~~a~av  225 (226)
                      .+|+|+|+.|+++ |||||+|+||+++|++.+....+.   .+.+..+..++.+|+|+|.++
T Consensus       146 ~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v  207 (234)
T d1o5ia_         146 TGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVV  207 (234)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHhcccCeEEeecccCccchhhhhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            9999999999999 999999999999999987765442   345667888999999999875

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-45  Score=298.71  Aligned_cols=211  Identities=22%  Similarity=0.306  Sum_probs=174.2

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEE---EEecCcchHHH---HHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVV---VSSRKQKNVDE---AVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~---~~~r~~~~~~~---~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      -|++|||||++|||++++++|+++|++|+   ++.|+.+..+.   ..+++...+.++..+.+|++++++++.+++++.+
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   81 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence            37899999999999999999999998854   44555444443   3444445577899999999999999999988753


Q ss_pred             HhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCcCCCCCCchhhHh
Q 027248           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVT  163 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~~~~~~~~~Y~~s  163 (226)
                        |.+|+||||||... ..++.+.+.++|++++++|+.|+++++++++|+|++  .|+||++||.++..+.|+.+.|++|
T Consensus        82 --g~idilvnnag~~~-~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~~~~~Y~as  158 (285)
T d1jtva_          82 --GRVDVLVCNAGLGL-LGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCAS  158 (285)
T ss_dssp             --SCCSEEEECCCCCC-CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHHH
T ss_pred             --cchhhhhhcccccc-cccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCCCchHHHHH
Confidence              79999999999886 688899999999999999999999999999999954  5899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch-------------h------hhhhccCCCCCchhhhc
Q 027248          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG-------------V------VSSVSSLKLSPPSSLTL  223 (226)
Q Consensus       164 Kaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~-------------~------~~~~~~~~~~~p~~~a~  223 (226)
                      |+|+.+|+++|+.|+++ ||+||+|+||+|+|+|.+.......             +      .+..+..+..+|||||+
T Consensus       159 Kaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PeeVA~  238 (285)
T d1jtva_         159 KFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAE  238 (285)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhhcccCCCHHHHHH
Confidence            99999999999999999 9999999999999999877654321             0      12233456889999998


Q ss_pred             cc
Q 027248          224 AV  225 (226)
Q Consensus       224 av  225 (226)
                      +|
T Consensus       239 ~v  240 (285)
T d1jtva_         239 VF  240 (285)
T ss_dssp             HH
T ss_pred             HH
Confidence            75

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-44  Score=290.44  Aligned_cols=208  Identities=24%  Similarity=0.323  Sum_probs=185.9

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhc-CCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      ++||++|||||++|||++++++|+++|++|++++|+++++++..+++.+. +..+..+.+|+++.+.++.+.+.+.+.++
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   91 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG   91 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhC
Confidence            89999999999999999999999999999999999999999998887654 55688999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc-CCEEEEEeccCCcCCCCCCchhhHhHHHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-GSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~-~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~  167 (226)
                      .+|+++||||... ..++.+.+.++|++++++|+.|++.+++.++|+|++ +|+||++||.++..+.|+.+.|++||+|+
T Consensus        92 ~~~~li~nag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~~~~p~~~~Y~asKaal  170 (269)
T d1xu9a_          92 GLDMLILNHITNT-SLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFAL  170 (269)
T ss_dssp             SCSEEEECCCCCC-CCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCTTCHHHHHHHHHH
T ss_pred             Ccccccccccccc-ccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhcCCCCCchHHHHHHHHH
Confidence            9999999999876 677888999999999999999999999999999964 78999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCC---CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhcc
Q 027248          168 LGLTKALAAEMAP---DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLA  224 (226)
Q Consensus       168 ~~~~~~la~e~~~---~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~a  224 (226)
                      ++|+++|+.|+++   ||+||+|+||+|+|+|........      ......+|+++|+.
T Consensus       171 ~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~~~~~~------~~~~~~~~e~~a~~  224 (269)
T d1xu9a_         171 DGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGI------VHMQAAPKEECALE  224 (269)
T ss_dssp             HHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCGG------GGGGCBCHHHHHHH
T ss_pred             HHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHHhccCC------ccccCCCHHHHHHH
Confidence            9999999999863   799999999999999876543221      12234567777653

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.4e-45  Score=296.21  Aligned_cols=187  Identities=24%  Similarity=0.270  Sum_probs=169.0

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhC-CCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCC
Q 027248           13 KVAIVTASTQGIGFGIAERLGLE-GASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id   91 (226)
                      +++|||||++|||++++++|+++ |++|++++|+++++++..+++...+.++.++.||+++.++++++++++.+++|++|
T Consensus         4 rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~iD   83 (275)
T d1wmaa1           4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLD   83 (275)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred             eEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCCcE
Confidence            45599999999999999999986 89999999999999999999999988999999999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcC-------------------
Q 027248           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ-------------------  152 (226)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~-------------------  152 (226)
                      +||||||+.. .....+.+.++|++++++|++|+++++++++|+|++.|+||++||..+..                   
T Consensus        84 iLVnNAGi~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~~~~~y~~~k~~~~~~~  162 (275)
T d1wmaa1          84 VLVNNAGIAF-KVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETIT  162 (275)
T ss_dssp             EEEECCCCCC-CTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCC
T ss_pred             EEEEcCCcCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccceeccccccchhhhhhhcccccc
Confidence            9999999986 56777788899999999999999999999999999889999999976532                   


Q ss_pred             ----------------------CCCCCchhhHhHHHHHHHHHHHHHHhC----C-CeEEEEEecCceeCCccccc
Q 027248          153 ----------------------PQSSMAMYGVTKTALLGLTKALAAEMA----P-DTRVNCVAPGFVPTHFAEYI  200 (226)
Q Consensus       153 ----------------------~~~~~~~Y~~sKaa~~~~~~~la~e~~----~-~i~v~~v~Pg~v~t~~~~~~  200 (226)
                                            ...+..+|++||+++.+|++.++.|++    . +|+||+|+||+|+|+|....
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~~~  237 (275)
T d1wmaa1         163 EEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPK  237 (275)
T ss_dssp             HHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCTT
T ss_pred             hhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcccCc
Confidence                                  122345799999999999999999874    2 89999999999999997654

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=100.00  E-value=7.7e-44  Score=291.45  Aligned_cols=218  Identities=23%  Similarity=0.336  Sum_probs=191.0

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhc-CCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      ..+|+||++|||||++|||++++++|+++|++|++++|+.+++++..+++... +.++.++.+|++++++++.+++.+.+
T Consensus        20 ~~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~   99 (294)
T d1w6ua_          20 PNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIK   99 (294)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhh
Confidence            46899999999999999999999999999999999999999999988887654 66788999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhh---cCCEEEEEeccCCcCCCCCCchhhH
Q 027248           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ---KGSSVVLISSIAGYQPQSSMAMYGV  162 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~---~~~~iv~~sS~~~~~~~~~~~~Y~~  162 (226)
                      +++++|+||||||... ..++...+.++|++.+.+|+.+.+.+.+...+.+.   ..+.+++++|..+..+.++..+|++
T Consensus       100 ~~g~iDilvnnAg~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~~~~Ysa  178 (294)
T d1w6ua_         100 VAGHPNIVINNAAGNF-ISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSAS  178 (294)
T ss_dssp             HTCSCSEEEECCCCCC-CSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHH
T ss_pred             hccccchhhhhhhhcc-ccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcccccchHHH
Confidence            9999999999999876 67888999999999999999999999998887663   2467888999888888999999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCc-----hhhhhhccCCCCCchhhhccc
Q 027248          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND-----GVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       163 sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~-----~~~~~~~~~~~~~p~~~a~av  225 (226)
                      ||+|+.+|+|.|+.|+++ |||||+|+||+|+|++........     .+.+.++.+++.+|+|+|.+|
T Consensus       179 sKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v  247 (294)
T d1w6ua_         179 AKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLA  247 (294)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCCCCCCCHHHHHHHH
Confidence            999999999999999999 999999999999999987665432     234566778999999999875

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.1e-43  Score=280.51  Aligned_cols=214  Identities=23%  Similarity=0.367  Sum_probs=184.7

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      +++||++|||||++|||++++++|+++|++|++++|+++++++..+++   +.+.....+|+.+.+.++.....+....+
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL---GNNCVFAPADVTSEKDVQTALALAKGKFG   78 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCCcccccccccccccccccccccccccc
Confidence            689999999999999999999999999999999999999998888777   45678889999999999999999999999


Q ss_pred             CCCEEEEcCCCCCC-----CCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--------CCEEEEEeccCCcCCCC
Q 027248           89 KIDVVVSNAAANPS-----VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--------GSSVVLISSIAGYQPQS  155 (226)
Q Consensus        89 ~id~li~nag~~~~-----~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--------~~~iv~~sS~~~~~~~~  155 (226)
                      .+|.+++|+++...     ..+..+.+.++|++++++|+.+++++++++.|+|..        +|+||++||..+..+.|
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~  158 (248)
T d2o23a1          79 RVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQV  158 (248)
T ss_dssp             CCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCT
T ss_pred             cccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCCC
Confidence            99999999876542     345677888999999999999999999999998732        46899999999999999


Q ss_pred             CCchhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC--chhhhhhcc-CCCCCchhhhccc
Q 027248          156 SMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN--DGVVSSVSS-LKLSPPSSLTLAV  225 (226)
Q Consensus       156 ~~~~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~-~~~~~p~~~a~av  225 (226)
                      +.++|++||+|+++|+|+|+.|+++ |||||+|+||+++|+|...+..+  +.+...++. .++.+|+|||.++
T Consensus       159 ~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~~R~g~peevA~~v  232 (248)
T d2o23a1         159 GQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFPSRLGDPAEYAHLV  232 (248)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----------CHHHHTCSSSCSCBCHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCCHHHHHHHHhcCCCCCCCcCHHHHHHHH
Confidence            9999999999999999999999999 99999999999999998876543  223444443 7799999999875

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-43  Score=283.34  Aligned_cols=206  Identities=25%  Similarity=0.361  Sum_probs=177.0

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      |+||++|||||++|||+++++.|+++|++|++++|+++++++..+     ...+....+|+.+.+.++.    ..+.+++
T Consensus         4 l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~-----~~~~~~~~~d~~~~~~~~~----~~~~~~~   74 (245)
T d2ag5a1           4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK-----YPGIQTRVLDVTKKKQIDQ----FANEVER   74 (245)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGG-----STTEEEEECCTTCHHHHHH----HHHHCSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-----ccCCceeeeeccccccccc----ccccccc
Confidence            889999999999999999999999999999999999877654432     2346677889888766554    4556789


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCc-CCCCCCchhhHhHHH
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGY-QPQSSMAMYGVTKTA  166 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~-~~~~~~~~Y~~sKaa  166 (226)
                      +|+||||||... .+++.+.+.++|++.+++|+.+++.+++++.|+|.+  .|+||++||..+. .+.++..+|+++|+|
T Consensus        75 id~lVn~ag~~~-~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~~Y~~sKaa  153 (245)
T d2ag5a1          75 LDVLFNVAGFVH-HGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAA  153 (245)
T ss_dssp             CSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHHHH
T ss_pred             ceeEEecccccC-CCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCccchhHHHHHHHH
Confidence            999999999886 678999999999999999999999999999998854  5799999998775 578899999999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccC--------chhhhhhccCCCCCchhhhccc
Q 027248          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN--------DGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       167 ~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~--------~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +++|+|+|+.|+++ |||||+|+||+++||+.......        ..+....+..++.+|+|+|+++
T Consensus       154 l~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedva~~v  221 (245)
T d2ag5a1         154 VIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLC  221 (245)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHH
T ss_pred             HHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            99999999999999 99999999999999987654321        2244567788899999999875

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=1.3e-42  Score=277.61  Aligned_cols=187  Identities=21%  Similarity=0.309  Sum_probs=167.3

Q ss_pred             CEEEEEcCCCchhHHHHHHHH---hCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH--Hh
Q 027248           13 KVAIVTASTQGIGFGIAERLG---LEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE--KF   87 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~---~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~--~~   87 (226)
                      |+||||||++|||++++++|+   ++|++|++++|++++++++. ++.+.+.++.++.+|++++++++++++++.+  .+
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   81 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELE-DLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD   81 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHH-HHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-HHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence            889999999999999999996   57999999999999988765 4445567899999999999999999999854  67


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc-------------CCEEEEEeccCCcC--
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-------------GSSVVLISSIAGYQ--  152 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~-------------~~~iv~~sS~~~~~--  152 (226)
                      +++|+||||||+......+.+.+.++|++++++|+.|++.++++++|+|++             .+++|+++|..+..  
T Consensus        82 ~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~~  161 (248)
T d1snya_          82 QGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQG  161 (248)
T ss_dssp             GCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTT
T ss_pred             CCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccCC
Confidence            899999999998765667889999999999999999999999999999953             47899999998764  


Q ss_pred             -CCCCCchhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCccccc
Q 027248          153 -PQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYI  200 (226)
Q Consensus       153 -~~~~~~~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~  200 (226)
                       +.++..+|++||+|+++|+++|+.|+++ ||+||+|+||+|+|+|....
T Consensus       162 ~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~~~~  211 (248)
T d1snya_         162 NTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSS  211 (248)
T ss_dssp             CCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCTT
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCccccc
Confidence             3566779999999999999999999998 99999999999999998654

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.8e-41  Score=271.23  Aligned_cols=186  Identities=22%  Similarity=0.333  Sum_probs=156.4

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCC--eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      +.|+||||||++|||++++++|+++|+  +|++++|+.++++++.+   ..+.++.++.+|++++++++++++++.+.++
T Consensus         2 ~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~---~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~   78 (250)
T d1yo6a1           2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS---IKDSRVHVLPLTVTCDKSLDTFVSKVGEIVG   78 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT---CCCTTEEEEECCTTCHHHHHHHHHHHHHHHG
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHH---hhCCceEEEEEecCCHHHHHHHHHHHHHHhC
Confidence            359999999999999999999999996  68999999988776543   2345789999999999999999999999876


Q ss_pred             --CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc-------------CCEEEEEeccCCcCC
Q 027248           89 --KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-------------GSSVVLISSIAGYQP  153 (226)
Q Consensus        89 --~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~-------------~~~iv~~sS~~~~~~  153 (226)
                        .+|+||||||+.....++.+.+.++|++++++|+.|+++++++++|+|++             .+++++++|..+...
T Consensus        79 ~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~  158 (250)
T d1yo6a1          79 SDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSIT  158 (250)
T ss_dssp             GGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCST
T ss_pred             CCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceecccccccccccccc
Confidence              49999999998765677889999999999999999999999999999953             267999988765432


Q ss_pred             -------CCCCchhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccc
Q 027248          154 -------QSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEY  199 (226)
Q Consensus       154 -------~~~~~~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~  199 (226)
                             ..+..+|++||+|+++|+++|+.|+++ ||+||+|+||+|+|+|...
T Consensus       159 ~~~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~~  212 (250)
T d1yo6a1         159 DNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK  212 (250)
T ss_dssp             TCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-------
T ss_pred             CCcccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCCC
Confidence                   233457999999999999999999988 9999999999999998754

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.7e-41  Score=269.24  Aligned_cols=199  Identities=17%  Similarity=0.177  Sum_probs=173.4

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC--
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG--   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~--   88 (226)
                      +||++|||||++|||++++++|+++|++|+++++++...          ........+|..+.++++.+...+.+.++  
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE----------ASASVIVKMTDSFTEQADQVTAEVGKLLGDQ   70 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT----------SSEEEECCCCSCHHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc----------ccccceeecccCcHHHHHHHHHHHHHHhCCC
Confidence            589999999999999999999999999999999987541          22445667888889999888888877654  


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHhHHHHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALL  168 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~  168 (226)
                      ++|+||||||.......+.+.+.++|++++++|+.++++++++++|+|+++|+||++||.++..+.++..+|++||+|++
T Consensus        71 ~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~  150 (236)
T d1dhra_          71 KVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPGMIGYGMAKGAVH  150 (236)
T ss_dssp             CEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHHH
T ss_pred             CceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCccCCcccHHHHHHHH
Confidence            69999999997654567778888999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhC--C-CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          169 GLTKALAAEMA--P-DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       169 ~~~~~la~e~~--~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +|+|+|+.|++  + ||+||+|+||+++|||.+...+...+      .++.+|+++|..+
T Consensus       151 ~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~------~~~~~pe~va~~~  204 (236)
T d1dhra_         151 QLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPEADF------SSWTPLEFLVETF  204 (236)
T ss_dssp             HHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTTSCG------GGSEEHHHHHHHH
T ss_pred             HHHHHHHHHhccCCCcEEEEEEEeccCcCCcchhhCccchh------hcCCCHHHHHHHH
Confidence            99999999997  4 99999999999999998766544332      3567899988753

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.3e-40  Score=264.87  Aligned_cols=216  Identities=19%  Similarity=0.238  Sum_probs=188.0

Q ss_pred             ccCCCEEEEEcCCC--chhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            9 RFQGKVAIVTASTQ--GIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         9 ~~~gk~vlItGa~~--giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      -|+||++|||||++  |||+++++.|+++|++|++++|+++..+. .+++............|+++..+++..++++.+.
T Consensus         2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (258)
T d1qsga_           2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGR-VEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKV   80 (258)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHH-HHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred             cCCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HHHHHhhcCCcceeecccchHHHHHHHHHHhhhc
Confidence            37899999999998  89999999999999999999999765444 4555555556778889999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCC----CCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhH
Q 027248           87 FGKIDVVVSNAAANPS----VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGV  162 (226)
Q Consensus        87 ~~~id~li~nag~~~~----~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~  162 (226)
                      ++++|++|||++....    .........+.|...+.+|+.+.+.+.+++.|.+++++.|+++||..+..+.|+...|++
T Consensus        81 ~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~~~~~~~Y~~  160 (258)
T d1qsga_          81 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGL  160 (258)
T ss_dssp             CSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTTTHHHH
T ss_pred             ccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccCCCCcHHHHH
Confidence            9999999999998642    112345667789999999999999999999999988889999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch----hhhhhccCCCCCchhhhccc
Q 027248          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG----VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       163 sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~----~~~~~~~~~~~~p~~~a~av  225 (226)
                      ||+|+++|+|+++.|+++ |||||+|+||+|+|++.+.......    .....+.+++.+|||+|+++
T Consensus       161 sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeia~~v  228 (258)
T d1qsga_         161 AKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSA  228 (258)
T ss_dssp             HHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhhhHHHHHHhCCCCCCCcCHHHHHHHH
Confidence            999999999999999999 9999999999999999887654433    34567788999999999865

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=4.6e-40  Score=260.75  Aligned_cols=198  Identities=22%  Similarity=0.203  Sum_probs=169.5

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH--hCC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK--FGK   89 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~--~~~   89 (226)
                      +++||||||++|||++++++|+++|++|++++|+++..          ........+|+.+.+..+...+.+.+.  +++
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   71 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ----------ADSNILVDGNKNWTEQEQSILEQTASSLQGSQ   71 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT----------SSEEEECCTTSCHHHHHHHHHHHHHHHHTTCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhc----------ccccceeccccCchhHHHHHHHHHHHHhcCCC
Confidence            45679999999999999999999999999999987642          123445667888888888877777664  588


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHhHHHHHH
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLG  169 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~  169 (226)
                      +|+||||||+.....+..+.+.++|+.++++|+.+++.++++++|+|+++++||++||..+..+.++..+|++||+|+++
T Consensus        72 iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~  151 (235)
T d1ooea_          72 VDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHH  151 (235)
T ss_dssp             EEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHHHH
T ss_pred             eeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCcccccchHHHHHHHHH
Confidence            99999999986545566777788999999999999999999999999988999999999999999999999999999999


Q ss_pred             HHHHHHHHhC--C-CeEEEEEecCceeCCcccccccCchhhhhhccCCCCCchhhhccc
Q 027248          170 LTKALAAEMA--P-DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       170 ~~~~la~e~~--~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      |+++|+.|++  + +|+||+|+||+++|++.+...++..      ..+..+|+++|+++
T Consensus       152 l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~~~~~~------~~~~~~~~~va~~~  204 (235)
T d1ooea_         152 LTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPNAD------HSSWTPLSFISEHL  204 (235)
T ss_dssp             HHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTTCC------GGGCBCHHHHHHHH
T ss_pred             HHHHHHHHhccCCCceEEEEEecCcCcCcchhhhCcCCc------cccCCCHHHHHHHH
Confidence            9999999997  4 8999999999999999877654433      23567899988753

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=1.3e-38  Score=263.96  Aligned_cols=186  Identities=17%  Similarity=0.165  Sum_probs=158.1

Q ss_pred             CCEEEEEc--CCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhc------------CCcEEEEE----------
Q 027248           12 GKVAIVTA--STQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR------------GIEVIGVV----------   67 (226)
Q Consensus        12 gk~vlItG--a~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~------------~~~~~~~~----------   67 (226)
                      +|++||||  +++|||+++++.|+++|++|++++++............+.            ........          
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND   81 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGG
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhcc
Confidence            69999999  5589999999999999999999999876655444333221            01112222          


Q ss_pred             ----------eeCCCHHHHHHHHHHHHHHhCCCCEEEEcCCCCCC-CCccccccHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 027248           68 ----------CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPS-VDSILQTKESVLDKLWDINVKSSILLLQDAAPHL  136 (226)
Q Consensus        68 ----------~Dv~~~~~v~~~~~~~~~~~~~id~li~nag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l  136 (226)
                                +|+++.++++.+++++.+.+|++|+||||+|.... .+++.+.+.++|++++++|+++++.++|+++|+|
T Consensus        82 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m  161 (329)
T d1uh5a_          82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM  161 (329)
T ss_dssp             CCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred             cchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhc
Confidence                      36678888999999999999999999999997643 3578899999999999999999999999999999


Q ss_pred             hcCCEEEEEeccCCcCCCCC-CchhhHhHHHHHHHHHHHHHHhCC--CeEEEEEecCceeCCcc
Q 027248          137 QKGSSVVLISSIAGYQPQSS-MAMYGVTKTALLGLTKALAAEMAP--DTRVNCVAPGFVPTHFA  197 (226)
Q Consensus       137 ~~~~~iv~~sS~~~~~~~~~-~~~Y~~sKaa~~~~~~~la~e~~~--~i~v~~v~Pg~v~t~~~  197 (226)
                      +++|+||++||.++..+.|+ ...|++||+|+++|+|+|+.|+++  |||||+|+||+|+|+..
T Consensus       162 ~~~GsIv~iss~~~~~~~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~a~  225 (329)
T d1uh5a_         162 KPQSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAA  225 (329)
T ss_dssp             EEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCTTG
T ss_pred             ccccccccceeehhcccccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccchhh
Confidence            98899999999999988887 567999999999999999999974  99999999999999543

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=100.00  E-value=3.5e-38  Score=256.06  Aligned_cols=212  Identities=26%  Similarity=0.330  Sum_probs=166.1

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCc-chHHHHHHHHHhcCC-cEEEE-----------------EeeCCCH
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ-KNVDEAVVKLKARGI-EVIGV-----------------VCHVSNG   73 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~-~~~~~~~~~~~~~~~-~~~~~-----------------~~Dv~~~   73 (226)
                      .++|||||++|||++++++|+++|++|++++|+. +..+...+++...+. ....+                 .+|++++
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~   82 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF   82 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCH
Confidence            5799999999999999999999999999887764 456666777765432 34444                 4569999


Q ss_pred             HHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHH--------------HHHHHHHHHHHHHHHHHhhhh---
Q 027248           74 QQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLD--------------KLWDINVKSSILLLQDAAPHL---  136 (226)
Q Consensus        74 ~~v~~~~~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~--------------~~~~~N~~~~~~~~~~~~~~l---  136 (226)
                      ++++++++++.+++|++|+||||||+.. ..++.+.+.++|+              .++.+|+.+++++.+.+.+.+   
T Consensus        83 ~~v~~~~~~~~~~~G~iDiLVnnAG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~  161 (284)
T d1e7wa_          83 TRCAELVAACYTHWGRCDVLVNNASSFY-PTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGT  161 (284)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHhCCCCEEEecCCccC-CCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhh
Confidence            9999999999999999999999999876 4566666655544              578999999999999987754   


Q ss_pred             ---hc--CCEEEEEeccCCcCCCCCCchhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchhhhhh
Q 027248          137 ---QK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVVSSV  210 (226)
Q Consensus       137 ---~~--~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~  210 (226)
                         ++  .++|++++|.....+.++..+|++||+|+.+|+|+|+.|+++ |||||+|+||++.+.....-...+.+....
T Consensus       162 ~~~~~~~~~~ii~~~s~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~~~~~~~~~~~~~~~  241 (284)
T d1e7wa_         162 PAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPPAVWEGHRSKV  241 (284)
T ss_dssp             CGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGGGSCHHHHHHHHTTC
T ss_pred             HHHhcCCCCcccccccccccCCccceeeeccccccchhhhHHHHHHhCCccccccccccccccccccCCHHHHHHHHhcC
Confidence               22  358999999999999999999999999999999999999999 999999999986654321111112233444


Q ss_pred             c-cCCCCCchhhhccc
Q 027248          211 S-SLKLSPPSSLTLAV  225 (226)
Q Consensus       211 ~-~~~~~~p~~~a~av  225 (226)
                      + .+++.+|+|+|+++
T Consensus       242 pl~~R~~~peeiA~~v  257 (284)
T d1e7wa_         242 PLYQRDSSAAEVSDVV  257 (284)
T ss_dssp             TTTTSCBCHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHH
Confidence            4 37789999999875

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=100.00  E-value=6e-38  Score=253.70  Aligned_cols=216  Identities=22%  Similarity=0.265  Sum_probs=180.9

Q ss_pred             ccCCCEEEEEcCCC--chhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            9 RFQGKVAIVTASTQ--GIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         9 ~~~gk~vlItGa~~--giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      .++||++|||||+|  |||+++|++|+++|++|++++|++ ++++..+++.+.+....++.+|++++++++++++++.+.
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~-~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   80 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNE-SLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKD   80 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESST-TTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHH
Confidence            47899999999865  999999999999999999999995 455566777777778888999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCC---CccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHh
Q 027248           87 FGKIDVVVSNAAANPSV---DSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVT  163 (226)
Q Consensus        87 ~~~id~li~nag~~~~~---~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~s  163 (226)
                      +|++|++|||+|.....   ....+..++.+...+.++..+.+...+...+..+.++.|+++||.+...+.++...|+++
T Consensus        81 ~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~~~~~y~as  160 (274)
T d2pd4a1          81 LGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLA  160 (274)
T ss_dssp             TSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTCHHHHHH
T ss_pred             cCCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeecccccccccccchhhhHH
Confidence            99999999999987532   233444456666666677777777777777766656678888888888888899999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch----hhhhhccCCCCCchhhhccc
Q 027248          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG----VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       164 Kaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~----~~~~~~~~~~~~p~~~a~av  225 (226)
                      |+|+.+|+|+++.|+++ |||||+|+||+++|++.......+.    .....+..++.+|+|+|.+|
T Consensus       161 K~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedIA~~v  227 (274)
T d2pd4a1         161 KAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAG  227 (274)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHH
T ss_pred             HHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHHHHHHHhhhhhccCCcCHHHHHHHH
Confidence            99999999999999999 9999999999999999877655333    34556778899999999875

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=3e-38  Score=258.15  Aligned_cols=220  Identities=20%  Similarity=0.212  Sum_probs=176.9

Q ss_pred             cccccCCCEEEEEcCCC--chhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhc---------C--Cc-EEEEEee--
Q 027248            6 MAKRFQGKVAIVTASTQ--GIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR---------G--IE-VIGVVCH--   69 (226)
Q Consensus         6 ~~~~~~gk~vlItGa~~--giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~---------~--~~-~~~~~~D--   69 (226)
                      |+++++||++|||||++  |||+++++.|+++|++|++.+|++.............         +  .. .....+|  
T Consensus         2 ~~~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (297)
T d1d7oa_           2 LPIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAV   81 (297)
T ss_dssp             CCCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTT
T ss_pred             CCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhh
Confidence            67789999999999876  9999999999999999999999865433332222111         0  01 1233333  


Q ss_pred             ------------------CCCHHHHHHHHHHHHHHhCCCCEEEEcCCCCCC-CCccccccHHHHHHHHHHHHHHHHHHHH
Q 027248           70 ------------------VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPS-VDSILQTKESVLDKLWDINVKSSILLLQ  130 (226)
Q Consensus        70 ------------------v~~~~~v~~~~~~~~~~~~~id~li~nag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~  130 (226)
                                        .++...++++++++.+++|++|+||||||.... ..++.+.+.++|++++++|+.+++.+++
T Consensus        82 ~~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~  161 (297)
T d1d7oa_          82 FDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLS  161 (297)
T ss_dssp             CCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             ccccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhh
Confidence                              345566788999999999999999999998632 4678999999999999999999999999


Q ss_pred             HHhhhhhcCCEEEEEeccCCcC-CCCCCchhhHhHHHHHHHHHHHHHHhC-C-CeEEEEEecCceeCCcccccccCch--
Q 027248          131 DAAPHLQKGSSVVLISSIAGYQ-PQSSMAMYGVTKTALLGLTKALAAEMA-P-DTRVNCVAPGFVPTHFAEYITSNDG--  205 (226)
Q Consensus       131 ~~~~~l~~~~~iv~~sS~~~~~-~~~~~~~Y~~sKaa~~~~~~~la~e~~-~-~i~v~~v~Pg~v~t~~~~~~~~~~~--  205 (226)
                      +++|+++++++++.+++..... ..+....|+++|+++.++++.++.|++ + |||||+|+||+++|++.+.....+.  
T Consensus       162 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~  241 (297)
T d1d7oa_         162 HFLPIMNPGGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMI  241 (297)
T ss_dssp             HHGGGEEEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHHHHH
T ss_pred             HHHHHhhcCCcceeeeehhhcccccccccceecccccccccccccchhccccceEEecccccccccchhhhhccCCHHHH
Confidence            9999998888877777776553 457788899999999999999999996 5 9999999999999999876544333  


Q ss_pred             --hhhhhccCCCCCchhhhccc
Q 027248          206 --VVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       206 --~~~~~~~~~~~~p~~~a~av  225 (226)
                        ..+..+.+++.+|+|+|.++
T Consensus       242 ~~~~~~~PlgR~~~peevA~~v  263 (297)
T d1d7oa_         242 EYSYNNAPIQKTLTADEVGNAA  263 (297)
T ss_dssp             HHHHHHSSSCCCBCHHHHHHHH
T ss_pred             HHHHhCCCCCCCCCHHHHHHHH
Confidence              44556778899999999875

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=6.8e-37  Score=242.74  Aligned_cols=201  Identities=23%  Similarity=0.292  Sum_probs=168.0

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id   91 (226)
                      .|++|||||++|||++++++|+++|++|++++|+++.            .+...+.+|+++......+.....+.. ..+
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~------------~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~   67 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG------------EDLIYVEGDVTREEDVRRAVARAQEEA-PLF   67 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS------------SSSEEEECCTTCHHHHHHHHHHHHHHS-CEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc------------ccceEeeccccchhhhHHHHHhhhccc-ccc
Confidence            4999999999999999999999999999999998764            356678999999999999888877664 555


Q ss_pred             EEEEcCCCCCC---CCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhh--------cCCEEEEEeccCCcCCCCCCchh
Q 027248           92 VVVSNAAANPS---VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--------KGSSVVLISSIAGYQPQSSMAMY  160 (226)
Q Consensus        92 ~li~nag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~--------~~~~iv~~sS~~~~~~~~~~~~Y  160 (226)
                      .++++++....   .......+.+.|++++++|+.+++.+++.+.+.+.        +.|+||++||..+..+.++..+|
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~~Y  147 (241)
T d1uaya_          68 AVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAY  147 (241)
T ss_dssp             EEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHH
T ss_pred             chhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCCchhh
Confidence            66666665431   33455677899999999999999999999988742        24799999999999999999999


Q ss_pred             hHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch--hhhhhc-cCCCCCchhhhccc
Q 027248          161 GVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG--VVSSVS-SLKLSPPSSLTLAV  225 (226)
Q Consensus       161 ~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~--~~~~~~-~~~~~~p~~~a~av  225 (226)
                      ++||+|+.+|+|+|+.|+++ |||||+|+||+++|++.........  .....+ ..++.+|+|+|.++
T Consensus       148 ~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~R~g~pedvA~~v  216 (241)
T d1uaya_         148 AASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPRLGRPEEYAALV  216 (241)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHHHHHTTCCSSCSCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhhhhHHHHHHhcCCCCCCCcCHHHHHHHH
Confidence            99999999999999999999 9999999999999998877654322  223333 36789999999875

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=100.00  E-value=6.6e-36  Score=240.32  Aligned_cols=213  Identities=26%  Similarity=0.320  Sum_probs=170.7

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcch-HHHHHHHHHhc-CCcEEEEEeeCCC----HHHHHHHHHHHHHH
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN-VDEAVVKLKAR-GIEVIGVVCHVSN----GQQRKNLINQTIEK   86 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~-~~~~~~~~~~~-~~~~~~~~~Dv~~----~~~v~~~~~~~~~~   86 (226)
                      .++|||||++|||++++++|+++|++|++++|+.++ .+++.+++.+. +.+...+.+|+.+    ++.++++++++.++
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA   81 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence            479999999999999999999999999999999765 45666677655 4566677766544    56677888889999


Q ss_pred             hCCCCEEEEcCCCCCCCC----------ccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc-------CCEEEEEeccC
Q 027248           87 FGKIDVVVSNAAANPSVD----------SILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-------GSSVVLISSIA  149 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~----------~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~-------~~~iv~~sS~~  149 (226)
                      +|++|+||||||+.....          ...+...+.+...+.+|+.+++...+...+.+..       .+.+++++|..
T Consensus        82 ~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (266)
T d1mxha_          82 FGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAM  161 (266)
T ss_dssp             HSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGG
T ss_pred             hCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhcc
Confidence            999999999999875221          1223345667888999999999999988887632       35788999999


Q ss_pred             CcCCCCCCchhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchhhhhhccCC-CCCchhhhccc
Q 027248          150 GYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVVSSVSSLK-LSPPSSLTLAV  225 (226)
Q Consensus       150 ~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~-~~~p~~~a~av  225 (226)
                      +..+.|++..|++||+|+++|+|+|+.|+++ |||||+|+||+++|++...-...+.+.+.++..+ +.+|+|+|.++
T Consensus       162 ~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~pl~r~~~~peeva~~v  239 (266)
T d1mxha_         162 TDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMPQETQEEYRRKVPLGQSEASAAQIADAI  239 (266)
T ss_dssp             GGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSCHHHHHHHHTTCTTTSCCBCHHHHHHHH
T ss_pred             ccccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCCHHHHHHHHhcCCCCCCCCCHHHHHHHH
Confidence            9999999999999999999999999999999 9999999999999987654333344555555544 47999999875

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=100.00  E-value=6e-36  Score=240.98  Aligned_cols=214  Identities=18%  Similarity=0.188  Sum_probs=174.7

Q ss_pred             ccCCCEEEEEcC--CCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            9 RFQGKVAIVTAS--TQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         9 ~~~gk~vlItGa--~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      -++||++|||||  ++|||++++++|+++|++|++++|+.+++.+...+  +.+.+...+.+|++++++++.+++.+.+.
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~--~~~~~~~~~~~dv~~~~~~~~~~~~v~~~   80 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITD--RLPAKAPLLELDVQNEEHLASLAGRVTEA   80 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHT--TSSSCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHH--HcCCceeeEeeecccccccccccchhhhc
Confidence            468999999994  57999999999999999999999998765433222  23556778899999999999999999876


Q ss_pred             h---CCCCEEEEcCCCCCC----CCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCch
Q 027248           87 F---GKIDVVVSNAAANPS----VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAM  159 (226)
Q Consensus        87 ~---~~id~li~nag~~~~----~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~  159 (226)
                      +   +.+|++|||+|+...    ..++.+.+.++|.+.+.+|+.+.+...+...+++.+.+ +++++|.....+.|++..
T Consensus        81 ~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~s~~~~~~~p~~~~  159 (268)
T d2h7ma1          81 IGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGG-SIVGMDFDPSRAMPAYNW  159 (268)
T ss_dssp             HCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEE-EEEEEECCCSSCCTTTHH
T ss_pred             cccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhccccc-ccccccccccccCcccch
Confidence            5   579999999997531    34667888999999999999999999999998875544 556666777778899999


Q ss_pred             hhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCch--------------hhhhhcc-CCCCCchhhhc
Q 027248          160 YGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG--------------VVSSVSS-LKLSPPSSLTL  223 (226)
Q Consensus       160 Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~--------------~~~~~~~-~~~~~p~~~a~  223 (226)
                      |+++|+|+.+|+|+++.|+++ |||||+|+||+++|++.+.+.....              +....+. .++..|+|+|+
T Consensus       160 y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~rr~~~p~dva~  239 (268)
T d2h7ma1         160 MTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAK  239 (268)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCCHHHHH
T ss_pred             hhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCCCCCCCCHHHHHH
Confidence            999999999999999999999 9999999999999998765543211              1122333 34899999998


Q ss_pred             cc
Q 027248          224 AV  225 (226)
Q Consensus       224 av  225 (226)
                      ++
T Consensus       240 ~v  241 (268)
T d2h7ma1         240 TV  241 (268)
T ss_dssp             HH
T ss_pred             HH
Confidence            75

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=100.00  E-value=5.7e-34  Score=228.45  Aligned_cols=204  Identities=21%  Similarity=0.213  Sum_probs=164.7

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCc---chHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQ---KNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      ++++|||||++|||++++++|+++|+ +|++++|+.   +..++..+++...+.++.++.||++++++++.+++.+.+. 
T Consensus         9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~-   87 (259)
T d2fr1a1           9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD-   87 (259)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT-
T ss_pred             cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccccc-
Confidence            57999999999999999999999998 589999874   4566777888888889999999999999999999987654 


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHhHHHH
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~  167 (226)
                      +.+|.+|||+|+.. ..++.+.+.++|+.++++|+.+++++.+.+.+.  +.++||++||..+..+.++.+.|+++|+++
T Consensus        88 ~~i~~vv~~ag~~~-~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~--~~~~iv~~SS~a~~~g~~~~~~YaAaka~l  164 (259)
T d2fr1a1          88 VPLSAVFHAAATLD-DGTVDTLTGERIERASRAKVLGARNLHELTREL--DLTAFVLFSSFASAFGAPGLGGYAPGNAYL  164 (259)
T ss_dssp             SCEEEEEECCCCCC-CCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS--CCSEEEEEEEHHHHTCCTTCTTTHHHHHHH
T ss_pred             cccccccccccccc-ccccccccHHHHHHHhhhhccchhHHHHHhhcc--CCceEeeecchhhccCCcccHHHHHHHHhH
Confidence            68999999999987 688999999999999999999999998876653  457999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCeEEEEEecCceeCC-cccccccCchhhhhhccCCCCCchhhhccc
Q 027248          168 LGLTKALAAEMAPDTRVNCVAPGFVPTH-FAEYITSNDGVVSSVSSLKLSPPSSLTLAV  225 (226)
Q Consensus       168 ~~~~~~la~e~~~~i~v~~v~Pg~v~t~-~~~~~~~~~~~~~~~~~~~~~~p~~~a~av  225 (226)
                      +.|++.++.+   |+++++|+||.+.++ |...... +.+.+.  -....+|+++++++
T Consensus       165 ~~la~~~~~~---Gi~v~~I~pg~~~~~g~~~~~~~-~~~~~~--G~~~~~~~~~~~~l  217 (259)
T d2fr1a1         165 DGLAQQRRSD---GLPATAVAWGTWAGSGMAEGPVA-DRFRRH--GVIEMPPETACRAL  217 (259)
T ss_dssp             HHHHHHHHHT---TCCCEEEEECCBC-------------CTTT--TEECBCHHHHHHHH
T ss_pred             HHHHHHHHhC---CCCEEECCCCcccCCccccchHH-HHHHhc--CCCCCCHHHHHHHH
Confidence            9988877655   899999999987543 4332111 111100  01246788877654

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.98  E-value=3.3e-32  Score=217.57  Aligned_cols=188  Identities=23%  Similarity=0.291  Sum_probs=138.1

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH-hCCCC
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK-FGKID   91 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~~~id   91 (226)
                      |+||||||++|||++++++|+++|++|++++|++++                 ..+|+.+.+..+....+...+ .+.+|
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~-----------------~~~d~~~~~~~~~~~~~~~~~~~~~id   64 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE-----------------VIADLSTAEGRKQAIADVLAKCSKGMD   64 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS-----------------EECCTTSHHHHHHHHHHHHTTCTTCCS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH-----------------HHHHhcCHHHHHHHHHHHHHHhCCCCc
Confidence            899999999999999999999999999999998653                 356999999988877666554 46799


Q ss_pred             EEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCEEEEEeccCCc------------------
Q 027248           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGY------------------  151 (226)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~iv~~sS~~~~------------------  151 (226)
                      ++|||||+...        .+.|.....+|..+...+.+...+.+.+  ...+.++++....                  
T Consensus        65 ~lv~~Ag~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  136 (257)
T d1fjha_          65 GLVLCAGLGPQ--------TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEE  136 (257)
T ss_dssp             EEEECCCCCTT--------CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCH
T ss_pred             EEEEcCCCCCc--------HHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcE
Confidence            99999997542        2346788899999999999998887754  2345554443321                  


Q ss_pred             ---------C-CCCCCchhhHhHHHHHHHHHHHHHHhCC-CeEEEEEecCceeCCcccccccCchhhh-----hhccCCC
Q 027248          152 ---------Q-PQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVVS-----SVSSLKL  215 (226)
Q Consensus       152 ---------~-~~~~~~~Y~~sKaa~~~~~~~la~e~~~-~i~v~~v~Pg~v~t~~~~~~~~~~~~~~-----~~~~~~~  215 (226)
                               . ..++..+|++||+|+++|+|+|+.|+++ |||||+|+||+++||+.+....+....+     ..+.+++
T Consensus       137 ~~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~PlgR~  216 (257)
T d1fjha_         137 AKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRR  216 (257)
T ss_dssp             HHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCCSTTSC
T ss_pred             EEEeeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCHHHHHHHHhcCCCCCCC
Confidence                     1 1223457999999999999999999998 9999999999999999887665544322     2466789


Q ss_pred             CCchhhhccc
Q 027248          216 SPPSSLTLAV  225 (226)
Q Consensus       216 ~~p~~~a~av  225 (226)
                      .+|+|+|+++
T Consensus       217 g~p~eva~~v  226 (257)
T d1fjha_         217 AEPSEMASVI  226 (257)
T ss_dssp             CCTHHHHHHH
T ss_pred             cCHHHHHHHH
Confidence            9999999875

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.85  E-value=2.9e-20  Score=154.42  Aligned_cols=173  Identities=17%  Similarity=0.039  Sum_probs=129.6

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcc-----hHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK-----NVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      .|+||||||+|.||..++++|+++|++|+.++|...     +++....+......++.++++|++|.++++++++..   
T Consensus         1 ~K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   77 (357)
T d1db3a_           1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV---   77 (357)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhcc---
Confidence            489999999999999999999999999999999643     233333333333557889999999999999988865   


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhh-hcCCEEEEEeccCCcC-----------CC
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHL-QKGSSVVLISSIAGYQ-----------PQ  154 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l-~~~~~iv~~sS~~~~~-----------~~  154 (226)
                        .+|+++|.|+.....     .+.++.+..+++|+.|+.++++++...- ++..++|++||...+.           +.
T Consensus        78 --~~d~v~h~aa~~~~~-----~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~  150 (357)
T d1db3a_          78 --QPDEVYNLGAMSHVA-----VSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPF  150 (357)
T ss_dssp             --CCSEEEECCCCCTTT-----TTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCC
T ss_pred             --CCCEEEEeecccccc-----hhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCCCCC
Confidence              899999999986422     2234457788999999999999987653 4456899999976431           12


Q ss_pred             CCCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCc
Q 027248          155 SSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHF  196 (226)
Q Consensus       155 ~~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~  196 (226)
                      .+...|+.||.+.+.+++.++..+  ++.+..+.|+.+..|.
T Consensus       151 ~P~~~Y~~sK~~~E~~~~~~~~~~--~l~~~ilR~~~vyGp~  190 (357)
T d1db3a_         151 YPRSPYAVAKLYAYWITVNYRESY--GMYACNGILFNHESPR  190 (357)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHH--CCCEEEEEECCEECTT
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHh--CCCEEEEEeccccCCC
Confidence            346789999999999999998876  6778888888777663

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.85  E-value=1.2e-22  Score=155.01  Aligned_cols=154  Identities=16%  Similarity=0.104  Sum_probs=114.4

Q ss_pred             cccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus         6 ~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      +..+++||+++||||++|||+++++.|+++|++|++++|+.++++...+++.+.. ++.+..+|+++.+++++++     
T Consensus        17 ~~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~-----   90 (191)
T d1luaa1          17 AGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF-KVNVTAAETADDASRAEAV-----   90 (191)
T ss_dssp             TTSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH-TCCCEEEECCSHHHHHHHT-----
T ss_pred             cCCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhcc-chhhhhhhcccHHHHHHHh-----
Confidence            3468999999999999999999999999999999999999999999888887643 3456788999999887664     


Q ss_pred             HhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc-CCEEEEEeccCCcCC-CCCCchhhHh
Q 027248           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-GSSVVLISSIAGYQP-QSSMAMYGVT  163 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~-~~~iv~~sS~~~~~~-~~~~~~Y~~s  163 (226)
                        +++|+||||||+..     ...+.++|++.+++|+.+.++....+.+.+.. ......+++..+..+ ..+...|+.+
T Consensus        91 --~~iDilin~Ag~g~-----~~~~~e~~~~~~~~nv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~y~~s  163 (191)
T d1luaa1          91 --KGAHFVFTAGAIGL-----ELLPQAAWQNESSIEIVADYNAQPPLGIGGIDATDKGKEYGGKRAFGALGIGGLKLKLH  163 (191)
T ss_dssp             --TTCSEEEECCCTTC-----CCBCHHHHHTCTTCCEEEECCCSSSCSBTTCCTTCEEEEETTEEEECHHHHHHHHHHHH
T ss_pred             --cCcCeeeecCcccc-----ccCCHHHHHhhhcceeehhHhhHHHHHHHhhhhccCcEEecceEEEeccCcCcHHHHHH
Confidence              58999999999742     34678999999999988877655444333211 112222222221111 1234569999


Q ss_pred             HHHHHHHHH
Q 027248          164 KTALLGLTK  172 (226)
Q Consensus       164 Kaa~~~~~~  172 (226)
                      |+++..+++
T Consensus       164 k~a~~~l~~  172 (191)
T d1luaa1         164 RACIAKLFE  172 (191)
T ss_dssp             HHHHHHHTS
T ss_pred             HHHHHHHHh
Confidence            999987764

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.79  E-value=6e-18  Score=139.56  Aligned_cols=172  Identities=17%  Similarity=0.118  Sum_probs=128.5

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcch-HHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN-VDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      .|+||||||+|.||..++++|+++|++|+++++.... .+.....-.....++.++.+|++|.+.++.+++..     ++
T Consensus         1 ~K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~-----~~   75 (347)
T d1z45a2           1 SKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY-----KI   75 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS-----CC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhcc-----CC
Confidence            3899999999999999999999999999998864332 22222222222345778899999999998887643     89


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcC---------------CCC
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ---------------PQS  155 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~---------------~~~  155 (226)
                      |++||.|+....     ....+.-...+.+|+.++.++.+++...-  -.++|++||...+.               +..
T Consensus        76 d~VihlAa~~~~-----~~~~~~~~~~~~~N~~~t~~ll~~~~~~~--i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~  148 (347)
T d1z45a2          76 DSVIHFAGLKAV-----GESTQIPLRYYHNNILGTVVLLELMQQYN--VSKFVFSSSATVYGDATRFPNMIPIPEECPLG  148 (347)
T ss_dssp             CEEEECCSCCCH-----HHHHHSHHHHHHHHHHHHHHHHHHHHHHT--CCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCC
T ss_pred             CEEEEccccccc-----cccccCcccccccchhhhHHHHHHHHhcc--cceEEeecceeeecCcccCCCCCccccccCCC
Confidence            999999997531     11233446788899999999999987642  24899999976542               122


Q ss_pred             CCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCC
Q 027248          156 SMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTH  195 (226)
Q Consensus       156 ~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~  195 (226)
                      +...|+.||.+.+.+.+.+..+...++.+..+.|+.+-.+
T Consensus       149 p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~  188 (347)
T d1z45a2         149 PTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGA  188 (347)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECC
T ss_pred             CCChhHhHHHHHHHHHHHHHHhhccCCcEEEEeecceEee
Confidence            4567999999999999999887655788888887766543

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.77  E-value=3.5e-18  Score=140.85  Aligned_cols=177  Identities=20%  Similarity=0.166  Sum_probs=133.4

Q ss_pred             ccccccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHH
Q 027248            3 KMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLI   80 (226)
Q Consensus         3 ~~~~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~   80 (226)
                      +|+++--..||+|+||||+|.||..++++|+++|++|+.+.|+.++...........  ......+..|+++.++++.++
T Consensus         2 ~~~~~~~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   81 (342)
T d1y1pa1           2 KIDNAVLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVI   81 (342)
T ss_dssp             CSTTCSSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTT
T ss_pred             CCCCCCCCCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhc
Confidence            456665667999999999999999999999999999999999887665544333222  223445778999998876655


Q ss_pred             HHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCC-------
Q 027248           81 NQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP-------  153 (226)
Q Consensus        81 ~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~-------  153 (226)
                      .       ..|+++|+++....     ..+   ....+.+|+.|+.++++++...- .-.++|++||..+...       
T Consensus        82 ~-------~~~~v~~~a~~~~~-----~~~---~~~~~~~nv~gt~~ll~~~~~~~-~v~~~i~~SS~~~~~~~~~~~~~  145 (342)
T d1y1pa1          82 K-------GAAGVAHIASVVSF-----SNK---YDEVVTPAIGGTLNALRAAAATP-SVKRFVLTSSTVSALIPKPNVEG  145 (342)
T ss_dssp             T-------TCSEEEECCCCCSC-----CSC---HHHHHHHHHHHHHHHHHHHHTCT-TCCEEEEECCGGGTCCCCTTCCC
T ss_pred             c-------cchhhhhhcccccc-----ccc---ccccccchhhhHHHHHHhhhccc-ccccccccccceeeccCCCCCCC
Confidence            4       78999999986531     122   24567789999999999887641 2348999999754211       


Q ss_pred             ------------------------CCCCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCC
Q 027248          154 ------------------------QSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTH  195 (226)
Q Consensus       154 ------------------------~~~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~  195 (226)
                                              ..+...|+.||.+.+.+++.+.++...++++..++|+.+--|
T Consensus       146 ~~~~e~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp  211 (342)
T d1y1pa1         146 IYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGT  211 (342)
T ss_dssp             CEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECC
T ss_pred             ccccccccccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCC
Confidence                                    112346999999999999999999877888889999887655

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.77  E-value=3.1e-17  Score=137.41  Aligned_cols=175  Identities=14%  Similarity=0.099  Sum_probs=129.7

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecC----------------cchHHHHHHHHH-hcCCcEEEEEeeCCCHH
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRK----------------QKNVDEAVVKLK-ARGIEVIGVVCHVSNGQ   74 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~----------------~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~   74 (226)
                      |++|+||||+|.||.+++++|+++|++|++++.-                ............ ..+.++.++.+|++|.+
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~   80 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE   80 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence            7889999999999999999999999999998621                111222222222 22456889999999999


Q ss_pred             HHHHHHHHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcC--
Q 027248           75 QRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ--  152 (226)
Q Consensus        75 ~v~~~~~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~--  152 (226)
                      .++++++..     ++|+|+|.|+...  ......+.+.....+.+|+.|+.++++++...- ...++++.||.....  
T Consensus        81 ~l~~~~~~~-----~~d~ViHlAa~~~--~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~-~~~~~i~~ss~~~~~~~  152 (393)
T d1i24a_          81 FLAESFKSF-----EPDSVVHFGEQRS--APYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFG-EECHLVKLGTMGEYGTP  152 (393)
T ss_dssp             HHHHHHHHH-----CCSEEEECCSCCC--HHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEECCGGGGCCC
T ss_pred             HHHHHHHhh-----cchheeccccccc--cccccccccccccccccccccccHHHHHHHHhc-cccceeecccccccccc
Confidence            999888865     8999999998753  233344556677889999999999999887642 123677777765431  


Q ss_pred             ----------------------CCCCCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCc
Q 027248          153 ----------------------PQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHF  196 (226)
Q Consensus       153 ----------------------~~~~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~  196 (226)
                                            +..+...|+.||.+.+.+++.+..++  ++.+..+.|+.+.-+.
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~--~l~~~~lR~~~v~G~~  216 (393)
T d1i24a_         153 NIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW--GIRATDLNQGVVYGVK  216 (393)
T ss_dssp             SSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH--CCEEEEEEECEEECSC
T ss_pred             ccccccccccccccccccccccccccccHHHHHhhhhccccccccccc--ceeeeecccccccCCC
Confidence                                  12334579999999999999888776  6788888888776653

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.77  E-value=1.9e-17  Score=136.16  Aligned_cols=169  Identities=16%  Similarity=0.139  Sum_probs=128.3

Q ss_pred             EEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHH-hcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCEE
Q 027248           15 AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLK-ARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVV   93 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~l   93 (226)
                      ||||||+|.||..+++.|+++|++|++++|............. ....++.++++|++|.+.++++++..     ++|++
T Consensus         3 iLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~d~V   77 (338)
T d1udca_           3 VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDH-----AIDTV   77 (338)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHT-----TCSEE
T ss_pred             EEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhcc-----CCCEE
Confidence            9999999999999999999999999999874433222222211 12346888999999999988877753     79999


Q ss_pred             EEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCC------------CCCCchhh
Q 027248           94 VSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP------------QSSMAMYG  161 (226)
Q Consensus        94 i~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~------------~~~~~~Y~  161 (226)
                      ||.|+....     ..+.++..+.+++|+.|+.++++++...-  -.++|++||...+.+            ..+...|+
T Consensus        78 iHlAa~~~~-----~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~--v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~~~Y~  150 (338)
T d1udca_          78 IHFAGLKAV-----GESVQKPLEYYDNNVNGTLRLISAMRAAN--VKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYG  150 (338)
T ss_dssp             EECCSCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHHHHT--CCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHH
T ss_pred             EECCCccch-----hhHHhCHHHHHHhHHHHHHHHHHHHHHhC--CCEEEecCcceEEccccccccccccccCCCcchHH
Confidence            999996431     12334557889999999999999997752  348999999876522            13467899


Q ss_pred             HhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCc
Q 027248          162 VTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHF  196 (226)
Q Consensus       162 ~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~  196 (226)
                      .+|.+.+.+.+....+. .++.+..+.|+.+-.+.
T Consensus       151 ~sK~~~e~~~~~~~~~~-~~~~~~ilR~~~v~G~~  184 (338)
T d1udca_         151 KSKLMVEQILTDLQKAQ-PDWSIALLRYFNPVGAH  184 (338)
T ss_dssp             HHHHHHHHHHHHHHHHS-TTCEEEEEEECEEECCC
T ss_pred             HHHhhhhHHHHHHHhhc-cCCeEEEEeeccEEecc
Confidence            99999999998877774 36778788888777653

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=4.8e-17  Score=133.75  Aligned_cols=171  Identities=14%  Similarity=0.027  Sum_probs=126.0

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcch-----HHHHHHHHH-hcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN-----VDEAVVKLK-ARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~-----~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      |++|||||+|.||.+++++|+++|++|+.++|....     ++....... ....++.++.+|++|.+.++.++...   
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   78 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV---   78 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH---
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhc---
Confidence            445999999999999999999999999999996532     222111111 11236789999999999998888765   


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhh-hcCCEEEEEeccCCcC-----------CC
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHL-QKGSSVVLISSIAGYQ-----------PQ  154 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l-~~~~~iv~~sS~~~~~-----------~~  154 (226)
                        .+++++|.++....     ..+.+.....+++|+.|+.++.+++...- .+..++|++||.+.+.           +.
T Consensus        79 --~~~~v~~~~a~~~~-----~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~  151 (347)
T d1t2aa_          79 --KPTEIYNLGAQSHV-----KISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPF  151 (347)
T ss_dssp             --CCSEEEECCSCCCH-----HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCC
T ss_pred             --ccceeeeeeecccc-----chhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCCCCC
Confidence              88899999886431     23344556778999999999999987764 3346899999976531           12


Q ss_pred             CCCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCC
Q 027248          155 SSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTH  195 (226)
Q Consensus       155 ~~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~  195 (226)
                      .+...|+.||.+.+.+++.+..++  ++.+..+.|+.+.-|
T Consensus       152 ~P~~~Yg~sK~~aE~~~~~~~~~~--~~~~~ilr~~~vyGp  190 (347)
T d1t2aa_         152 YPRSPYGAAKLYAYWIVVNFREAY--NLFAVNGILFNHESP  190 (347)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHH--CCEEEEEEECCEECT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHh--CCCEEEEEecceeCC
Confidence            345689999999999999888776  677777888766554

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.72  E-value=4.8e-17  Score=135.03  Aligned_cols=169  Identities=12%  Similarity=0.047  Sum_probs=125.6

Q ss_pred             EEEEcCCCchhHHHHHHHHhCCCeEE-EEecCcchH-HHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCE
Q 027248           15 AIVTASTQGIGFGIAERLGLEGASVV-VSSRKQKNV-DEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g~~v~-~~~r~~~~~-~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~   92 (226)
                      ||||||+|.||.+++++|++.|++++ .+++..... ......+ ....++.++.+|++|.+.++++++..     .+|+
T Consensus         3 ILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~d~   76 (361)
T d1kewa_           3 ILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDI-SESNRYNFEHADICDSAEITRIFEQY-----QPDA   76 (361)
T ss_dssp             EEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTT-TTCTTEEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred             EEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhh-hhcCCcEEEEccCCCHHHHHHHHHhC-----CCCE
Confidence            89999999999999999999999854 455432111 0111111 11346889999999999998887754     8999


Q ss_pred             EEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc-------CCEEEEEeccCCcCC------------
Q 027248           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-------GSSVVLISSIAGYQP------------  153 (226)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~-------~~~iv~~sS~~~~~~------------  153 (226)
                      |||.|+....     ..+.++...++++|+.|+.++.+++.....+       ..++|++||...+..            
T Consensus        77 VihlAa~~~~-----~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~  151 (361)
T d1kewa_          77 VMHLAAESHV-----DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVT  151 (361)
T ss_dssp             EEECCSCCCH-----HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSC
T ss_pred             EEECccccch-----hhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccC
Confidence            9999996431     1233445778999999999999998775422       358999999875421            


Q ss_pred             ---------CCCCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCc
Q 027248          154 ---------QSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHF  196 (226)
Q Consensus       154 ---------~~~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~  196 (226)
                               ..+.+.|+.||.+.+.+++.+...+  ++.+..+.|+.+--|.
T Consensus       152 ~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~--~i~~~~lR~~~vyGp~  201 (361)
T d1kewa_         152 LPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY--GLPTIVTNCSNNYGPY  201 (361)
T ss_dssp             CCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH--CCCEEEEEECEEESTT
T ss_pred             CCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh--CCCEEEEecCceECcC
Confidence                     1235669999999999999998877  6888888888877653

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.71  E-value=1.5e-16  Score=129.38  Aligned_cols=170  Identities=13%  Similarity=-0.032  Sum_probs=125.5

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHH-HHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCC
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVD-EAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id   91 (226)
                      |+||||||+|.||++++++|+++|++|+.++|...... ...+++. ...++.++.+|++|.+.+++++...     ..+
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~~   74 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG-IEGDIQYEDGDMADACSVQRAVIKA-----QPQ   74 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT-CGGGEEEEECCTTCHHHHHHHHHHH-----CCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhc-ccCCcEEEEccccChHHhhhhhccc-----ccc
Confidence            78999999999999999999999999999999764321 1122221 1246889999999999988877754     788


Q ss_pred             EEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCc-----------CCCCCCchh
Q 027248           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY-----------QPQSSMAMY  160 (226)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~-----------~~~~~~~~Y  160 (226)
                      ++++.|+....     ....++..+.+.+|+.|+.+++.++...-. ..++++.||....           .+..+...|
T Consensus        75 ~~~~~a~~~~~-----~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~-~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~~~Y  148 (321)
T d1rpna_          75 EVYNLAAQSFV-----GASWNQPVTTGVVDGLGVTHLLEAIRQFSP-ETRFYQASTSEMFGLIQAERQDENTPFYPRSPY  148 (321)
T ss_dssp             EEEECCSCCCH-----HHHTTSHHHHHHHHTHHHHHHHHHHHHHCT-TSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHH
T ss_pred             ccccccccccc-----cccccchHHHHhhhhhchHHHHHHHHHhCC-CcccccccchhhcCcccCCCCCCCCCccccChh
Confidence            88888876541     112234578889999999999998876421 2367777765432           122356789


Q ss_pred             hHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCc
Q 027248          161 GVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHF  196 (226)
Q Consensus       161 ~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~  196 (226)
                      +.+|.+.+.+.+.+..++  ++.+..+.|+.+.-|.
T Consensus       149 ~~sK~~~E~~~~~~~~~~--~~~~~~lr~~~vyGp~  182 (321)
T d1rpna_         149 GVAKLYGHWITVNYRESF--GLHASSGILFNHESPL  182 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHH--CCCEEEEEECCEECTT
T ss_pred             HHHHHHHHHHHHHHHhhc--CCcEEEEEEecccCCC
Confidence            999999999999988886  5677777777665553

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.71  E-value=2.8e-16  Score=127.52  Aligned_cols=151  Identities=13%  Similarity=0.143  Sum_probs=118.8

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCE
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~   92 (226)
                      |+||||||+|.||.+++++|+++|+.++++++..+                    +|+.+.+.++.++..     ..+|+
T Consensus         3 kkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~~--------------------~~~~~~~~~~~~~~~-----~~~d~   57 (315)
T d1e6ua_           3 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE--------------------LNLLDSRAVHDFFAS-----ERIDQ   57 (315)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTT--------------------CCTTCHHHHHHHHHH-----HCCSE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCchh--------------------ccccCHHHHHHHHhh-----cCCCE
Confidence            68999999999999999999999999887765432                    499999998887653     28999


Q ss_pred             EEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCC----------------CC
Q 027248           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQ----------------SS  156 (226)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~----------------~~  156 (226)
                      ++|.|+.... .   .....+..+.+++|+.|+.++++++...-  -.++|++||.+.+.+.                +.
T Consensus        58 v~~~a~~~~~-~---~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~--v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~  131 (315)
T d1e6ua_          58 VYLAAAKVGG-I---VANNTYPADFIYQNMMIESNIIHAAHQND--VNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPT  131 (315)
T ss_dssp             EEECCCCCCC-H---HHHHHCHHHHHHHHHHHHHHHHHHHHHTT--CCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGG
T ss_pred             EEEcchhccc-c---ccchhhHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEECCceEcCCCCCCCccCCccccCCCCCC
Confidence            9999976531 1   12234446678899999999999987652  2489999998865321                12


Q ss_pred             CchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCc
Q 027248          157 MAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHF  196 (226)
Q Consensus       157 ~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~  196 (226)
                      ...|+.||.+.+.+++.+..+.  |+++..+.|+.+--|.
T Consensus       132 ~~~Y~~sK~~~E~~~~~~~~~~--gl~~~ilR~~~vyGp~  169 (315)
T d1e6ua_         132 NEPYAIAKIAGIKLCESYNRQY--GRDYRSVMPTNLYGPH  169 (315)
T ss_dssp             GHHHHHHHHHHHHHHHHHHHHH--CCEEEEEEECEEESTT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHh--CCCEEEEeeccEECCC
Confidence            3579999999999999998887  7899999998887654

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.70  E-value=5.4e-16  Score=127.34  Aligned_cols=170  Identities=16%  Similarity=0.025  Sum_probs=127.6

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHH-----hcCCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLK-----ARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~-----~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      .-|++|||||+|.||.+++++|.++|++|+.++|....-........     ....++.++.+|+.|.........    
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~----   90 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA----   90 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT----
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccc----
Confidence            45899999999999999999999999999999874332222211111     113467889999999887554433    


Q ss_pred             HhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCC-----------C
Q 027248           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP-----------Q  154 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~-----------~  154 (226)
                         ..+.++|.++....     ..+.++....+++|+.|+.++++++...  +-.++|++||...+..           .
T Consensus        91 ---~~~~v~~~~a~~~~-----~~~~~~~~~~~~~Nv~gt~~ll~~~~~~--~~~~~i~~SS~~vyg~~~~~~~~E~~~~  160 (341)
T d1sb8a_          91 ---GVDYVLHQAALGSV-----PRSINDPITSNATNIDGFLNMLIAARDA--KVQSFTYAASSSTYGDHPGLPKVEDTIG  160 (341)
T ss_dssp             ---TCSEEEECCSCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHT--TCSEEEEEEEGGGGTTCCCSSBCTTCCC
T ss_pred             ---cccccccccccccc-----cccccCccchhheeehhHHHHHHHHHhc--CCceEEEcccceeeCCCCCCCccCCCCC
Confidence               78899988876431     2245667889999999999999998764  2348999999876522           2


Q ss_pred             CCCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCc
Q 027248          155 SSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHF  196 (226)
Q Consensus       155 ~~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~  196 (226)
                      .+.+.|+.||.+.+.+++.+..+.  ++++..+.|+.+..+.
T Consensus       161 ~p~~~Y~~sK~~~E~~~~~~~~~~--~i~~~ilR~~~v~G~~  200 (341)
T d1sb8a_         161 KPLSPYAVTKYVNELYADVFSRCY--GFSTIGLRYFNVFGRR  200 (341)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHH--CCCCEEEEECCEECTT
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHh--CCCeEEEEeceeeccC
Confidence            345789999999999999988776  5777788888776553

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.70  E-value=5e-16  Score=127.08  Aligned_cols=172  Identities=16%  Similarity=0.048  Sum_probs=126.8

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcc-----hHHHHHHHHHh-cCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK-----NVDEAVVKLKA-RGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~-----~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      |++|||||+|.||.+++++|+++|++|+.++|...     +++........ ....+.++.+|+++.+.++..++..   
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~---   78 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI---   78 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH---
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhh---
Confidence            89999999999999999999999999999999543     22222111111 1345778899999999988887754   


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc---CCEEEEEeccCCc----------CC
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGY----------QP  153 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~---~~~iv~~sS~~~~----------~~  153 (226)
                        ++|++||.|+....     ..+.++....+.+|..+...+..++.....+   ..++++.||....          .+
T Consensus        79 --~~D~Vih~Aa~~~~-----~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~E~~~  151 (339)
T d1n7ha_          79 --KPDEVYNLAAQSHV-----AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTP  151 (339)
T ss_dssp             --CCSEEEECCSCCCH-----HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSC
T ss_pred             --ccchhhhccccccc-----cccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCCCCCC
Confidence              89999999997541     1233455778899999999998888754322   2356666665432          12


Q ss_pred             CCCCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCc
Q 027248          154 QSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHF  196 (226)
Q Consensus       154 ~~~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~  196 (226)
                      ..+...|+.+|.+.+.++..+.+++  ++.+..+.|+.+--|.
T Consensus       152 ~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~vyGp~  192 (339)
T d1n7ha_         152 FHPRSPYAASKCAAHWYTVNYREAY--GLFACNGILFNHESPR  192 (339)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHH--CCEEEEEEECCEECTT
T ss_pred             CCCcchhhHHHHHHHHHHHHHHHHh--CCCEEEEEEccccCCC
Confidence            3356789999999999999888876  6888899998876653

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=4.5e-16  Score=119.12  Aligned_cols=150  Identities=12%  Similarity=0.062  Sum_probs=106.2

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id   91 (226)
                      .|+|+||||||+||++++++|+++|++|.++.|++++++..      ....+.++.+|+++.++++++++       ..|
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~------~~~~~~~~~gD~~d~~~l~~al~-------~~d   69 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE------GPRPAHVVVGDVLQAADVDKTVA-------GQD   69 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS------SCCCSEEEESCTTSHHHHHHHHT-------TCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc------cccccccccccccchhhHHHHhc-------CCC
Confidence            37899999999999999999999999999999998774322      12357789999999998777665       789


Q ss_pred             EEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCC----CchhhHhHHHH
Q 027248           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSS----MAMYGVTKTAL  167 (226)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~----~~~Y~~sKaa~  167 (226)
                      ++|+++|......+            .+++..++.++++++...  .-.++|++||.......+.    ...|...|...
T Consensus        70 ~vi~~~g~~~~~~~------------~~~~~~~~~~l~~aa~~~--~v~r~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~  135 (205)
T d1hdoa_          70 AVIVLLGTRNDLSP------------TTVMSEGARNIVAAMKAH--GVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRM  135 (205)
T ss_dssp             EEEECCCCTTCCSC------------CCHHHHHHHHHHHHHHHH--TCCEEEEECCGGGTSCTTCSCGGGHHHHHHHHHH
T ss_pred             EEEEEeccCCchhh------------hhhhHHHHHHHHHHHHhc--CCCeEEEEeeeeccCCCccccccccccchHHHHH
Confidence            99999987542111            123445566666665442  1248999998765433222    23455566555


Q ss_pred             HHHHHHHHHHhCCCeEEEEEecCceeC
Q 027248          168 LGLTKALAAEMAPDTRVNCVAPGFVPT  194 (226)
Q Consensus       168 ~~~~~~la~e~~~~i~v~~v~Pg~v~t  194 (226)
                      +.+.+      ..+++...|.||++..
T Consensus       136 e~~l~------~~~~~~tiirp~~~~~  156 (205)
T d1hdoa_         136 HKVLR------ESGLKYVAVMPPHIGD  156 (205)
T ss_dssp             HHHHH------HTCSEEEEECCSEEEC
T ss_pred             HHHHH------hcCCceEEEecceecC
Confidence            54432      1389999999998854

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.69  E-value=5.1e-16  Score=127.82  Aligned_cols=175  Identities=20%  Similarity=0.108  Sum_probs=131.5

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      .++||+||||||+|.||.+++++|+++|++|+.++|+..+.....+... ....+..+.+|++|++.+.++++..     
T Consensus         5 ~~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~-~~~~i~~~~~Dl~d~~~l~~~~~~~-----   78 (356)
T d1rkxa_           5 FWQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR-VADGMQSEIGDIRDQNKLLESIREF-----   78 (356)
T ss_dssp             HHTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT-TTTTSEEEECCTTCHHHHHHHHHHH-----
T ss_pred             hhCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhh-cccCCeEEEeeccChHhhhhhhhhc-----
Confidence            3799999999999999999999999999999999998876544433322 2335888999999999988877754     


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcC------------CCCC
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ------------PQSS  156 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~------------~~~~  156 (226)
                      .+|+++|.|+...     ...+.+.....+.+|+.|+.++++++...- ....+++.||.....            +..+
T Consensus        79 ~~~~v~~~aa~~~-----~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p  152 (356)
T d1rkxa_          79 QPEIVFHMAAQPL-----VRLSYSEPVETYSTNVMGTVYLLEAIRHVG-GVKAVVNITSDKCYDNKEWIWGYRENEAMGG  152 (356)
T ss_dssp             CCSEEEECCSCCC-----HHHHHHCHHHHHHHHTHHHHHHHHHHHHHC-CCCEEEEECCGGGBCCCCSSSCBCTTSCBCC
T ss_pred             hhhhhhhhhcccc-----ccccccCCccccccccccchhhhhhhhccc-cccccccccccccccccccccccccccccCC
Confidence            8999999998643     123345567889999999999999887642 123455555444321            1224


Q ss_pred             CchhhHhHHHHHHHHHHHHHHhC------C-CeEEEEEecCceeCC
Q 027248          157 MAMYGVTKTALLGLTKALAAEMA------P-DTRVNCVAPGFVPTH  195 (226)
Q Consensus       157 ~~~Y~~sKaa~~~~~~~la~e~~------~-~i~v~~v~Pg~v~t~  195 (226)
                      ...|+.+|...+.+.+.++.++.      . ++.+..+.|+.+.-|
T Consensus       153 ~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp  198 (356)
T d1rkxa_         153 YDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGG  198 (356)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECT
T ss_pred             CCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCC
Confidence            56799999999999998888753      2 678888888876544

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.69  E-value=2.1e-15  Score=122.85  Aligned_cols=155  Identities=15%  Similarity=0.054  Sum_probs=112.9

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCEE
Q 027248           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVV   93 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~l   93 (226)
                      +||||||+|.||.+++++|+++|++|+.+++-........-+......++.++.+|+++.+.++++++..     ++|++
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~-----~~d~V   76 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKY-----MPDSC   76 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHH-----CCSEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhc-----CCceE
Confidence            4899999999999999999999999999876433222221122233457888999999999988887754     79999


Q ss_pred             EEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCC--------------------
Q 027248           94 VSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP--------------------  153 (226)
Q Consensus        94 i~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~--------------------  153 (226)
                      ||+|+....     ....++....+++|+.|+.++++++...  +..+.++.||.....+                    
T Consensus        77 ih~aa~~~~-----~~~~~~~~~~~~~Nv~gt~nll~~~~~~--~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (338)
T d1orra_          77 FHLAGQVAM-----TTSIDNPCMDFEINVGGTLNLLEAVRQY--NSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKP  149 (338)
T ss_dssp             EECCCCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCT
T ss_pred             Eeecccccc-----cccccChHHHHHHHHHHHHHHHHhhhcc--cccccccccccccccccccccccccccccccccccc
Confidence            999987541     1223445788999999999999987664  2224444444432211                    


Q ss_pred             --------CCCCchhhHhHHHHHHHHHHHHHHhCC
Q 027248          154 --------QSSMAMYGVTKTALLGLTKALAAEMAP  180 (226)
Q Consensus       154 --------~~~~~~Y~~sKaa~~~~~~~la~e~~~  180 (226)
                              ..+...|+.+|...+.+.......+..
T Consensus       150 ~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~~  184 (338)
T d1orra_         150 NGYDESTQLDFHSPYGCSKGAADQYMLDYARIFGL  184 (338)
T ss_dssp             TCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             cCcccCCccccccccccccchhhhhhhhhhhccCc
Confidence                    124577999999999999988888743

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=2.1e-17  Score=134.59  Aligned_cols=161  Identities=16%  Similarity=0.090  Sum_probs=115.3

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCE
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~   92 (226)
                      |+|+||||+|.||++++++|+++|++|+.++|............ ....++.....|+.+.     +       +.++|+
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~-----~-------~~~~d~   68 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHW-IGHENFELINHDVVEP-----L-------YIEVDQ   68 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGG-TTCTTEEEEECCTTSC-----C-------CCCCSE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHh-cCCCceEEEehHHHHH-----H-------HcCCCE
Confidence            78999999999999999999999999999987432211111111 1122344444444322     1       237999


Q ss_pred             EEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcC----------------CCCC
Q 027248           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ----------------PQSS  156 (226)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~----------------~~~~  156 (226)
                      |||.|+....  .   .+.++..+.+++|+.|+.++++++...   +.++|++||.+.+.                +..+
T Consensus        69 VihlAa~~~~--~---~~~~~~~~~~~~Nv~g~~~ll~~~~~~---~~k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p  140 (312)
T d2b69a1          69 IYHLASPASP--P---NYMYNPIKTLKTNTIGTLNMLGLAKRV---GARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGP  140 (312)
T ss_dssp             EEECCSCCSH--H---HHTTCHHHHHHHHHHHHHHHHHHHHHH---TCEEEEEEEGGGGBSCSSSSBCTTCCCBCCSSST
T ss_pred             EEECcccCCc--h---hHHhCHHHHHHHHHHHHHHHHHHHHHc---CCcEEEEEChheecCCCCCCCCccccCCCCCCCC
Confidence            9999996531  1   122344678899999999999987653   34899999976542                1234


Q ss_pred             CchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCc
Q 027248          157 MAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHF  196 (226)
Q Consensus       157 ~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~  196 (226)
                      ...|+.||.+.+.+++.++.++  ++++..+.|+.+--|.
T Consensus       141 ~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~lR~~~vyGp~  178 (312)
T d2b69a1         141 RACYDEGKRVAETMCYAYMKQE--GVEVRVARIFNTFGPR  178 (312)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHH--CCCEEEEEECCEECTT
T ss_pred             ccHHHHHHHHHHHHHHHHHHHh--CCcEEEEEeeeEECCC
Confidence            6789999999999999999887  7888899999887654

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=4.8e-17  Score=127.01  Aligned_cols=164  Identities=16%  Similarity=0.117  Sum_probs=119.7

Q ss_pred             cccccccccCCCEEEEEcCCCchhHHHHHHHHhCCC--eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHH
Q 027248            2 EKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNL   79 (226)
Q Consensus         2 ~~~~~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   79 (226)
                      .+++.+...++|+|+||||||.||++++++|+++|.  +|++++|++.+...      .....+....+|+.+.+++.+.
T Consensus         4 ~~~~~~~~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~------~~~~~i~~~~~D~~~~~~~~~~   77 (232)
T d2bkaa1           4 SKLREDFRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE------EAYKNVNQEVVDFEKLDDYASA   77 (232)
T ss_dssp             HHHHHHHHHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCS------GGGGGCEEEECCGGGGGGGGGG
T ss_pred             HHHHHHhCCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcc------cccceeeeeeeccccccccccc
Confidence            455566667789999999999999999999999995  79999998754322      1123466667788776654433


Q ss_pred             HHHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCch
Q 027248           80 INQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAM  159 (226)
Q Consensus        80 ~~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~  159 (226)
                             +...|++||++|...        ......+..++|+.++..+++++...-  -.++|++||.....  .....
T Consensus        78 -------~~~~d~vi~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~a~~~~--v~~fi~~Ss~~~~~--~~~~~  138 (232)
T d2bkaa1          78 -------FQGHDVGFCCLGTTR--------GKAGAEGFVRVDRDYVLKSAELAKAGG--CKHFNLLSSKGADK--SSNFL  138 (232)
T ss_dssp             -------GSSCSEEEECCCCCH--------HHHHHHHHHHHHTHHHHHHHHHHHHTT--CCEEEEECCTTCCT--TCSSH
T ss_pred             -------ccccccccccccccc--------cccchhhhhhhcccccceeeecccccC--ccccccCCcccccc--Cccch
Confidence                   347999999998642        234456678899999999998886532  24899999987653  34567


Q ss_pred             hhHhHHHHHHHHHHHHHHhCCCe-EEEEEecCceeCCc
Q 027248          160 YGVTKTALLGLTKALAAEMAPDT-RVNCVAPGFVPTHF  196 (226)
Q Consensus       160 Y~~sKaa~~~~~~~la~e~~~~i-~v~~v~Pg~v~t~~  196 (226)
                      |+.+|...+...+.    +  +. ++..+.||++-.+.
T Consensus       139 Y~~~K~~~E~~l~~----~--~~~~~~IlRP~~i~G~~  170 (232)
T d2bkaa1         139 YLQVKGEVEAKVEE----L--KFDRYSVFRPGVLLCDR  170 (232)
T ss_dssp             HHHHHHHHHHHHHT----T--CCSEEEEEECCEEECTT
T ss_pred             hHHHHHHhhhcccc----c--cccceEEecCceeecCC
Confidence            99999987765433    2  33 57788999987764

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.67  E-value=9.6e-16  Score=126.78  Aligned_cols=164  Identities=17%  Similarity=0.039  Sum_probs=124.1

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id   91 (226)
                      +.+||||||+|.||.+++++|.++|++|+.+++......      ...-....+..+|+++.+.+..+++       .+|
T Consensus        15 nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~------~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d   81 (363)
T d2c5aa1          15 NLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM------TEDMFCDEFHLVDLRVMENCLKVTE-------GVD   81 (363)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSS------CGGGTCSEEEECCTTSHHHHHHHHT-------TCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccch------hhhcccCcEEEeechhHHHHHHHhh-------cCC
Confidence            456999999999999999999999999999987654310      1111234677789999887655443       899


Q ss_pred             EEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCC------------------
Q 027248           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP------------------  153 (226)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~------------------  153 (226)
                      .+||.|+.... .   ....+.....+.+|+.++.+++.++...-.  .++|++||......                  
T Consensus        82 ~Vih~a~~~~~-~---~~~~~~~~~~~~~n~~gt~~ll~~~~~~~v--k~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~  155 (363)
T d2c5aa1          82 HVFNLAADMGG-M---GFIQSNHSVIMYNNTMISFNMIEAARINGI--KRFFYASSACIYPEFKQLETTNVSLKESDAWP  155 (363)
T ss_dssp             EEEECCCCCCC-H---HHHTTCHHHHHHHHHHHHHHHHHHHHHTTC--SEEEEEEEGGGSCGGGSSSSSSCEECGGGGSS
T ss_pred             eEeeccccccc-c---cccccccccccccccchhhHHHHhHHhhCc--cccccccccccccccccccccccccccccCCc
Confidence            99999987542 1   122334577888999999999999877532  48999999876421                  


Q ss_pred             CCCCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCc
Q 027248          154 QSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHF  196 (226)
Q Consensus       154 ~~~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~  196 (226)
                      ..+...|+.||.+.+.+++.+..++  ++.+..+.|+.+..+.
T Consensus       156 ~~p~~~Yg~sK~~~E~~~~~~~~~~--gl~~~ilR~~~vyG~~  196 (363)
T d2c5aa1         156 AEPQDAFGLEKLATEELCKHYNKDF--GIECRIGRFHNIYGPF  196 (363)
T ss_dssp             BCCSSHHHHHHHHHHHHHHHHHHHH--CCEEEEEEECCEECTT
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHh--CCCEEEEEeeeEeccC
Confidence            1235679999999999999988876  7888889998887653

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=2.5e-15  Score=123.41  Aligned_cols=170  Identities=16%  Similarity=0.073  Sum_probs=123.7

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecC------cchHHHHHHHHH-hcCCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRK------QKNVDEAVVKLK-ARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~------~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      |+||||||+|.||.+++++|++.|++|+.+++.      ........+.+. ....++.++.+|++|.+.++.++..   
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~---   79 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKK---   79 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH---
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccccc---
Confidence            789999999999999999999999999998742      111112222221 1245788999999999998887764   


Q ss_pred             HhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCC------------
Q 027248           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP------------  153 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~------------  153 (226)
                        ..+++++|.|+....     ..+.++..+.+++|+.|+.++.+++...-  -.+++++||......            
T Consensus        80 --~~~~~i~h~Aa~~~~-----~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~--v~~~i~~ss~~~~~~~~~~~~~~~~~~  150 (346)
T d1ek6a_          80 --YSFMAVIHFAGLKAV-----GESVQKPLDYYRVNLTGTIQLLEIMKAHG--VKNLVFSSSATVYGNPQYLPLDEAHPT  150 (346)
T ss_dssp             --CCEEEEEECCSCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHHHTT--CCEEEEEEEGGGGCSCSSSSBCTTSCC
T ss_pred             --cccccccccccccCc-----HhhHhCHHHHHHhhhcccccccchhhhcC--cccccccccceeeeccccccccccccc
Confidence              378899999997541     22334456788999999999998886542  237999988865421            


Q ss_pred             CCCCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCC
Q 027248          154 QSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTH  195 (226)
Q Consensus       154 ~~~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~  195 (226)
                      ......|+.+|...+...+.++... .++....+.|+.+..+
T Consensus       151 ~~~~~~Y~~~k~~~e~~~~~~~~~~-~~~~~~~lR~~~v~G~  191 (346)
T d1ek6a_         151 GGCTNPYGKSKFFIEEMIRDLCQAD-KTWNAVLLRYFNPTGA  191 (346)
T ss_dssp             CCCSSHHHHHHHHHHHHHHHHHHHC-TTCEEEEEEECEEECC
T ss_pred             cccCChHHHHHHHHHHHHHHHHHhc-cCCceEEEeecceecc
Confidence            2345679999999999888876542 2667777777766554

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.65  E-value=8.1e-16  Score=126.54  Aligned_cols=166  Identities=19%  Similarity=0.094  Sum_probs=120.4

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHH-hcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCC
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLK-ARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id   91 (226)
                      |.||||||+|.||.+++++|+++|++|.+++++.-........+. ....++.++.+|++|.+.+..++.       ..|
T Consensus         3 mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~-------~~~   75 (346)
T d1oc2a_           3 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAA-------KAD   75 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHT-------TCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHh-------hhh
Confidence            669999999999999999999999876555543210000000001 124578899999999998877754       788


Q ss_pred             EEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcC-------------------
Q 027248           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ-------------------  152 (226)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~-------------------  152 (226)
                      .++|.|+....     ..+..+..+.+++|+.|+.+++.++...   +.++|++||...+.                   
T Consensus        76 ~v~~~a~~~~~-----~~~~~~~~~~~~~N~~g~~nll~~~~~~---~~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~  147 (346)
T d1oc2a_          76 AIVHYAAESHN-----DNSLNDPSPFIHTNFIGTYTLLEAARKY---DIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKF  147 (346)
T ss_dssp             EEEECCSCCCH-----HHHHHCCHHHHHHHTHHHHHHHHHHHHH---TCEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSB
T ss_pred             hhhhhhhcccc-----cchhhCcccceeeehHhHHhhhhhhccc---cccccccccceEecccCccccccccccCccccc
Confidence            89999987541     1222344678899999999999887664   34788888776542                   


Q ss_pred             ----CCCCCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCC
Q 027248          153 ----PQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTH  195 (226)
Q Consensus       153 ----~~~~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~  195 (226)
                          +..+.+.|+.+|.+.+.+++.+..+.  ++++..+.|+.+.-|
T Consensus       148 ~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~--~i~~~ilR~~~vyGp  192 (346)
T d1oc2a_         148 TAETNYNPSSPYSSTKAASDLIVKAWVRSF--GVKATISNCSNNYGP  192 (346)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHHHHHHHHHH--CCEEEEEEECCEEST
T ss_pred             ccCCCCCCCCHHHHHHHHHHHHHHHHHHHc--CCCEEEEeecceeCC
Confidence                11235679999999999999988776  789999999888765

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.64  E-value=4.6e-15  Score=121.59  Aligned_cols=161  Identities=14%  Similarity=0.058  Sum_probs=120.7

Q ss_pred             EEEEcCCCchhHHHHHHHHhCC-CeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCEE
Q 027248           15 AIVTASTQGIGFGIAERLGLEG-ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVV   93 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~l   93 (226)
                      ||||||+|.||++++++|+++| ++|+.+++.........     ...++.++++|+++.+++.+.+.   +   .+|++
T Consensus         3 ILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~-----~~~~~~~i~~Di~~~~~~~~~~~---~---~~d~V   71 (342)
T d2blla1           3 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-----NHPHFHFVEGDISIHSEWIEYHV---K---KCDVV   71 (342)
T ss_dssp             EEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-----TCTTEEEEECCTTTCSHHHHHHH---H---HCSEE
T ss_pred             EEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhc-----cCCCeEEEECccCChHHHHHHHH---h---CCCcc
Confidence            8999999999999999999999 57999988765433322     14578999999998876544322   1   69999


Q ss_pred             EEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCC------------------C
Q 027248           94 VSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQ------------------S  155 (226)
Q Consensus        94 i~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~------------------~  155 (226)
                      ||+|+....     ....++....+.+|+.|+.++++++...   +.+.++.||...+...                  .
T Consensus        72 ih~a~~~~~-----~~~~~~~~~~~~~nv~gt~~ll~~~~~~---~~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (342)
T d2blla1          72 LPLVAIATP-----IEYTRNPLRVFELDFEENLRIIRYCVKY---RKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNK  143 (342)
T ss_dssp             EECBCCCCH-----HHHHHSHHHHHHHHTHHHHHHHHHHHHT---TCEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTC
T ss_pred             ccccccccc-----cccccCCccccccccccccccccccccc---cccccccccccccccccccccccccccccccccCC
Confidence            999997541     1223344678999999999999998653   3467777776643211                  2


Q ss_pred             CCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCCc
Q 027248          156 SMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHF  196 (226)
Q Consensus       156 ~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~  196 (226)
                      +...|+.||.+.+.+++.+.+++  ++.+..+.|..+-.+.
T Consensus       144 p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~i~r~~~~~g~~  182 (342)
T d2blla1         144 PRWIYSVSKQLLDRVIWAYGEKE--GLQFTLFRPFNWMGPR  182 (342)
T ss_dssp             GGGHHHHHHHHHHHHHHHHHHHH--CCCEEEEEECSEECSS
T ss_pred             Ccchhhhcccchhhhhhhhhccc--CceeEEeecccccccc
Confidence            34679999999999999998887  6778888887777653

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.61  E-value=5.1e-14  Score=117.12  Aligned_cols=168  Identities=21%  Similarity=0.143  Sum_probs=123.1

Q ss_pred             EEEEcCCCchhHHHHHHHHh-CCCeEEEEec---------CcchHHHHHHHHHhc--------CCcEEEEEeeCCCHHHH
Q 027248           15 AIVTASTQGIGFGIAERLGL-EGASVVVSSR---------KQKNVDEAVVKLKAR--------GIEVIGVVCHVSNGQQR   76 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~-~g~~v~~~~r---------~~~~~~~~~~~~~~~--------~~~~~~~~~Dv~~~~~v   76 (226)
                      ||||||+|.||..++++|++ .|++|+++++         ..+..+.....+...        .....++.+|++|.+.+
T Consensus         5 VLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l   84 (383)
T d1gy8a_           5 VLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNEDFL   84 (383)
T ss_dssp             EEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHHHH
T ss_pred             EEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCHHHh
Confidence            89999999999999999986 6899999874         122333333333222        22467889999999988


Q ss_pred             HHHHHHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcC----
Q 027248           77 KNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ----  152 (226)
Q Consensus        77 ~~~~~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~----  152 (226)
                      +++++.    ...+|+++|.|+....     ....+.....+++|+.++..++.++...-.  .++++.||.....    
T Consensus        85 ~~~~~~----~~~~d~ViH~Aa~~~~-----~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~--~~~~~~~s~~~~~~~~~  153 (383)
T d1gy8a_          85 NGVFTR----HGPIDAVVHMCAFLAV-----GESVRDPLKYYDNNVVGILRLLQAMLLHKC--DKIIFSSSAAIFGNPTM  153 (383)
T ss_dssp             HHHHHH----SCCCCEEEECCCCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHHHTTC--CEEEEEEEGGGTBSCCC
T ss_pred             hhhhhc----cceeehhhcccccccc-----cccccccccccccccccccccchhhhccCC--ccccccccccccccccc
Confidence            777754    4578999999997541     122344567888999999999988876532  3777777765432    


Q ss_pred             --------------CCCCCchhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCC
Q 027248          153 --------------PQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTH  195 (226)
Q Consensus       153 --------------~~~~~~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~  195 (226)
                                    +..+...|+.||.+.+.+++.+...+  |+.+.++.|+.+.-|
T Consensus       154 ~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~--gl~~~~lR~~~vyG~  208 (383)
T d1gy8a_         154 GSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY--GIKGICLRYFNACGA  208 (383)
T ss_dssp             -----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH--CCEEEEEEECEEECC
T ss_pred             ccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHh--CCCEEEEecceeecc
Confidence                          12346789999999999999988776  688888888776654

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.60  E-value=7.8e-15  Score=119.41  Aligned_cols=165  Identities=16%  Similarity=0.034  Sum_probs=120.4

Q ss_pred             EEEEcCCCchhHHHHHHHHhCCCeEE------EEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248           15 AIVTASTQGIGFGIAERLGLEGASVV------VSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g~~v~------~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      |+||||+|.||.+++++|+++|+.|.      ..++.................++.++..|.++........       .
T Consensus         3 IlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-------~   75 (322)
T d1r6da_           3 LLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLAREL-------R   75 (322)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHT-------T
T ss_pred             EEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhccc-------c
Confidence            89999999999999999999997543      3332211110100011122456889999999998766443       3


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCC-----------CCCC
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP-----------QSSM  157 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~-----------~~~~  157 (226)
                      .+|.++|.|+....     ........+.+++|+.++.++++++...  +..++|++||.+.+.+           ..+.
T Consensus        76 ~~d~vi~~a~~~~~-----~~~~~~~~~~~~~N~~gt~~ll~~~~~~--~~~~~I~~Ss~~~yg~~~~~~~~E~~~~~p~  148 (322)
T d1r6da_          76 GVDAIVHFAAESHV-----DRSIAGASVFTETNVQGTQTLLQCAVDA--GVGRVVHVSTNQVYGSIDSGSWTESSPLEPN  148 (322)
T ss_dssp             TCCEEEECCSCCCH-----HHHHHCCHHHHHHHTHHHHHHHHHHHHT--TCCEEEEEEEGGGGCCCSSSCBCTTSCCCCC
T ss_pred             ccceEEeecccccc-----cccccchHHHhhhhHHHHHHHHHHHHHc--CCceEEEeecceeecCCCCCCCCCCCCCCCC
Confidence            89999999987541     2233445677899999999999998764  2348999999876532           2345


Q ss_pred             chhhHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCC
Q 027248          158 AMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTH  195 (226)
Q Consensus       158 ~~Y~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~  195 (226)
                      +.|+.||.+.+.+++.+++++  ++++..+.|+.+--|
T Consensus       149 ~~Y~~sK~~~E~~~~~~~~~~--~~~~~~lR~~~vyGp  184 (322)
T d1r6da_         149 SPYAASKAGSDLVARAYHRTY--GLDVRITRCCNNYGP  184 (322)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHH--CCCEEEEEECEEECT
T ss_pred             CHHHHHHHHHHHHHHHHHHHh--CCCEEEEEeeeEECc
Confidence            689999999999999998886  788889999888765

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.57  E-value=1.2e-14  Score=112.34  Aligned_cols=166  Identities=13%  Similarity=0.079  Sum_probs=111.1

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCe--EEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGAS--VVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      ++|+||||+|.||++++++|+++|++  |+...|++++.+.       ....+.++.+|+++.+...++++       .+
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~-------~~   69 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK-------IGGEADVFIGDITDADSINPAFQ-------GI   69 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHH-------TTCCTTEEECCTTSHHHHHHHHT-------TC
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHh-------ccCCcEEEEeeeccccccccccc-------cc
Confidence            78999999999999999999999976  5566777654322       23356688899999998776654       79


Q ss_pred             CEEEEcCCCCCCCC--------ccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhH
Q 027248           91 DVVVSNAAANPSVD--------SILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGV  162 (226)
Q Consensus        91 d~li~nag~~~~~~--------~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~  162 (226)
                      |.+||+++......        .........+.....+|+.+...+........  .+...+.|+.....+......+..
T Consensus        70 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~s~~~~~~~~~~~~~~~~  147 (252)
T d2q46a1          70 DALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG--VKHIVVVGSMGGTNPDHPLNKLGN  147 (252)
T ss_dssp             SEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT--CSEEEEEEETTTTCTTCGGGGGGG
T ss_pred             eeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeecccccccc--ccccccccccccCCCCcccccccc
Confidence            99999998653111        11122223445666789999888887776653  347788887766555443333333


Q ss_pred             hHH-HHHHHHHHHHHHhCCCeEEEEEecCceeCCc
Q 027248          163 TKT-ALLGLTKALAAEMAPDTRVNCVAPGFVPTHF  196 (226)
Q Consensus       163 sKa-a~~~~~~~la~e~~~~i~v~~v~Pg~v~t~~  196 (226)
                      ++. ........+..+  .++++..+.||++-.+.
T Consensus       148 ~~~~~~~~~~~~~~~~--~~~~~~ilRp~~v~g~~  180 (252)
T d2q46a1         148 GNILVWKRKAEQYLAD--SGTPYTIIRAGGLLDKE  180 (252)
T ss_dssp             CCHHHHHHHHHHHHHH--SSSCEEEEEECEEECSC
T ss_pred             cchhhhhhhhhhhhhc--ccccceeecceEEECCC
Confidence            332 222222333333  37889999999987664

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.35  E-value=4.1e-12  Score=101.04  Aligned_cols=128  Identities=22%  Similarity=0.211  Sum_probs=94.1

Q ss_pred             EEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCEEE
Q 027248           15 AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVV   94 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~li   94 (226)
                      ||||||+|-||.+++++|.++|..| .++++...                 +.+|+++.+.++++++..     ++|+||
T Consensus         3 ILItG~tGfiG~~l~~~L~~~g~~v-~~~~~~~~-----------------~~~Dl~~~~~~~~~i~~~-----~~D~Vi   59 (298)
T d1n2sa_           3 ILLFGKTGQVGWELQRSLAPVGNLI-ALDVHSKE-----------------FCGDFSNPKGVAETVRKL-----RPDVIV   59 (298)
T ss_dssp             EEEECTTSHHHHHHHHHTTTTSEEE-EECTTCSS-----------------SCCCTTCHHHHHHHHHHH-----CCSEEE
T ss_pred             EEEECCCCHHHHHHHHHHHhCCCEE-EEECCCcc-----------------ccCcCCCHHHHHHHHHHc-----CCCEEE
Confidence            8999999999999999999998644 44554322                 246999999988888765     799999


Q ss_pred             EcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCC-----------CCCCchhhHh
Q 027248           95 SNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP-----------QSSMAMYGVT  163 (226)
Q Consensus        95 ~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~-----------~~~~~~Y~~s  163 (226)
                      |.||.... .    .+.+.-...+.+|+.++..+..++...   +.+++++||.....+           ..+...|+.+
T Consensus        60 h~Aa~~~~-~----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y~~~  131 (298)
T d1n2sa_          60 NAAAHTAV-D----KAESEPELAQLLNATSVEAIAKAANET---GAWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKT  131 (298)
T ss_dssp             ECCCCCCH-H----HHTTCHHHHHHHHTHHHHHHHHHHTTT---TCEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHH
T ss_pred             Eecccccc-c----ccccCccccccccccccccchhhhhcc---ccccccccccccccCCCCCCCccccccCCCchHhhh
Confidence            99997541 1    112233667789999999998888653   457888888764321           2245689999


Q ss_pred             HHHHHHHHHH
Q 027248          164 KTALLGLTKA  173 (226)
Q Consensus       164 Kaa~~~~~~~  173 (226)
                      |.+.+.+.+.
T Consensus       132 k~~~e~~~~~  141 (298)
T d1n2sa_         132 KLAGEKALQD  141 (298)
T ss_dssp             HHHHHHHHHH
T ss_pred             hhhhhhhHHh
Confidence            9988776554

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.34  E-value=2.7e-11  Score=95.62  Aligned_cols=141  Identities=21%  Similarity=0.250  Sum_probs=102.5

Q ss_pred             EEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCEEE
Q 027248           15 AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVV   94 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~li   94 (226)
                      |+||||||.||.+++++|.++|++|+.++|++                     +|++|.++++++++..     .+|++|
T Consensus         4 IlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~---------------------~D~~d~~~~~~~l~~~-----~~d~vi   57 (281)
T d1vl0a_           4 ILITGANGQLGREIQKQLKGKNVEVIPTDVQD---------------------LDITNVLAVNKFFNEK-----KPNVVI   57 (281)
T ss_dssp             EEEESTTSHHHHHHHHHHTTSSEEEEEECTTT---------------------CCTTCHHHHHHHHHHH-----CCSEEE
T ss_pred             EEEECCCCHHHHHHHHHHHhCCCEEEEeechh---------------------ccCCCHHHHHHHHHHc-----CCCEEE
Confidence            89999999999999999999999999999864                     4999999988887754     889999


Q ss_pred             EcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCc-----------CCCCCCchhhHh
Q 027248           95 SNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY-----------QPQSSMAMYGVT  163 (226)
Q Consensus        95 ~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~-----------~~~~~~~~Y~~s  163 (226)
                      |+|+....     +.+.......+..|......+.......   ...+++.||....           .+..+...|+.+
T Consensus        58 h~a~~~~~-----~~~~~~~~~~~~~n~~~~~~~~~~~~~~---~~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~~~~  129 (281)
T d1vl0a_          58 NCAAHTAV-----DKCEEQYDLAYKINAIGPKNLAAAAYSV---GAEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKT  129 (281)
T ss_dssp             ECCCCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHH---TCEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHH
T ss_pred             eecccccc-----ccccccchhhcccccccccccccccccc---cccccccccceeeeccccccccccccccchhhhhhh
Confidence            99886531     1223334566677877777776665543   3467777766443           123456679999


Q ss_pred             HHHHHHHHHHHHHHhCCCeEEEEEecCceeCC
Q 027248          164 KTALLGLTKALAAEMAPDTRVNCVAPGFVPTH  195 (226)
Q Consensus       164 Kaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~  195 (226)
                      |...+.+.+.    .  +.+...+.|+++.-+
T Consensus       130 k~~~e~~~~~----~--~~~~~i~R~~~vyG~  155 (281)
T d1vl0a_         130 KLEGENFVKA----L--NPKYYIVRTAWLYGD  155 (281)
T ss_dssp             HHHHHHHHHH----H--CSSEEEEEECSEESS
T ss_pred             hhHHHHHHHH----h--CCCccccceeEEeCC
Confidence            9887766543    2  345667888888654

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.34  E-value=2.4e-12  Score=98.23  Aligned_cols=149  Identities=13%  Similarity=0.100  Sum_probs=102.2

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCC--eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      .|+|+||||||.||++++++|+++|+  +|+...|++...          ..+   +..+..+..++..      ...+.
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~----------~~~---~~~~~~d~~~~~~------~~~~~   62 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE----------HPR---LDNPVGPLAELLP------QLDGS   62 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC----------CTT---EECCBSCHHHHGG------GCCSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh----------ccc---ccccccchhhhhh------ccccc
Confidence            58999999999999999999999997  577777765321          112   2334555443211      12357


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHhHHHHHH
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLG  169 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~  169 (226)
                      +|.+|+++|....       ....-+...++|+.++..+++++...  .-.+++++||..+..  .....|..+|...+.
T Consensus        63 ~d~vi~~~g~~~~-------~~~~~~~~~~~~~~~~~~~~~~a~~~--~v~~~i~~Ss~~~~~--~~~~~y~~~K~~~E~  131 (212)
T d2a35a1          63 IDTAFCCLGTTIK-------EAGSEEAFRAVDFDLPLAVGKRALEM--GARHYLVVSALGADA--KSSIFYNRVKGELEQ  131 (212)
T ss_dssp             CSEEEECCCCCHH-------HHSSHHHHHHHHTHHHHHHHHHHHHT--TCCEEEEECCTTCCT--TCSSHHHHHHHHHHH
T ss_pred             hheeeeeeeeecc-------ccccccccccchhhhhhhcccccccc--ccccccccccccccc--ccccchhHHHHHHhh
Confidence            9999999986421       11122567788999999999887653  234899999887643  346679999987776


Q ss_pred             HHHHHHHHhCCCe-EEEEEecCceeCCc
Q 027248          170 LTKALAAEMAPDT-RVNCVAPGFVPTHF  196 (226)
Q Consensus       170 ~~~~la~e~~~~i-~v~~v~Pg~v~t~~  196 (226)
                      +.+    +.  +. ++..+.|+.+.-+.
T Consensus       132 ~l~----~~--~~~~~~I~Rp~~v~G~~  153 (212)
T d2a35a1         132 ALQ----EQ--GWPQLTIARPSLLFGPR  153 (212)
T ss_dssp             HHT----TS--CCSEEEEEECCSEESTT
T ss_pred             hcc----cc--ccccceeeCCcceeCCc
Confidence            443    21  33 57788999987653

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.19  E-value=1.5e-10  Score=92.33  Aligned_cols=154  Identities=12%  Similarity=0.049  Sum_probs=91.0

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHH--HHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVD--EAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      ++||||||||.||++++++|+++|++|+++.|+.....  ............+.++.+|+++.+.+...+.       ..
T Consensus         4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~-------~~   76 (312)
T d1qyda_           4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALK-------QV   76 (312)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHT-------TC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhcc-------Cc
Confidence            34999999999999999999999999999999865322  1111111123457788999999988766554       78


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCC-CCCchhhHhHHHHHH
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQ-SSMAMYGVTKTALLG  169 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~-~~~~~Y~~sKaa~~~  169 (226)
                      +.++++++.....                .|..+...+..++...  ...+.++.||....... .....|..++.....
T Consensus        77 ~~~~~~~~~~~~~----------------~~~~~~~~~l~~a~~~--~~~~~v~~Ss~g~~~~~~~~~~~~~~~~~~~~~  138 (312)
T d1qyda_          77 DVVISALAGGVLS----------------HHILEQLKLVEAIKEA--GNIKRFLPSEFGMDPDIMEHALQPGSITFIDKR  138 (312)
T ss_dssp             SEEEECCCCSSSS----------------TTTTTHHHHHHHHHHS--CCCSEEECSCCSSCTTSCCCCCSSTTHHHHHHH
T ss_pred             chhhhhhhhcccc----------------cchhhhhHHHHHHHHh--cCCcEEEEeeccccCCCcccccchhhhhhHHHH
Confidence            8888888754311                2223333344444332  23456666765433211 111223333333333


Q ss_pred             HHHHHHHHhCCCeEEEEEecCcee
Q 027248          170 LTKALAAEMAPDTRVNCVAPGFVP  193 (226)
Q Consensus       170 ~~~~la~e~~~~i~v~~v~Pg~v~  193 (226)
                      ....+..+.  ++.+..+.|+.+.
T Consensus       139 ~~~~~~~~~--~~~~~i~r~~~~~  160 (312)
T d1qyda_         139 KVRRAIEAA--SIPYTYVSSNMFA  160 (312)
T ss_dssp             HHHHHHHHT--TCCBCEEECCEEH
T ss_pred             HHHHhhccc--ccceEEeccceee
Confidence            333333332  5666677777664

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.16  E-value=3.4e-10  Score=89.53  Aligned_cols=152  Identities=10%  Similarity=0.028  Sum_probs=94.5

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHH--HHHHH-hcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEA--VVKLK-ARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~--~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      |+||||||||.||++++++|++.|++|++++|+.......  ...+. .....+.++.+|+.+.+.....++       .
T Consensus         4 kKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~   76 (307)
T d1qyca_           4 SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK-------N   76 (307)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH-------T
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhh-------h
Confidence            7799999999999999999999999999999986543221  11111 113356778899999988766655       7


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHhHHHHHH
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLG  169 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~  169 (226)
                      .+.++++++....                    .+...+.+++...  ...++++.||............+...+.....
T Consensus        77 ~~~vi~~~~~~~~--------------------~~~~~~~~a~~~~--~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~  134 (307)
T d1qyca_          77 VDVVISTVGSLQI--------------------ESQVNIIKAIKEV--GTVKRFFPSEFGNDVDNVHAVEPAKSVFEVKA  134 (307)
T ss_dssp             CSEEEECCCGGGS--------------------GGGHHHHHHHHHH--CCCSEEECSCCSSCTTSCCCCTTHHHHHHHHH
T ss_pred             ceeeeeccccccc--------------------chhhHHHHHHHHh--ccccceeeeccccccccccccccccccccccc
Confidence            8899988875321                    1111222333222  12357777766544333344444444444444


Q ss_pred             HHHHHHHHhCCCeEEEEEecCceeCC
Q 027248          170 LTKALAAEMAPDTRVNCVAPGFVPTH  195 (226)
Q Consensus       170 ~~~~la~e~~~~i~v~~v~Pg~v~t~  195 (226)
                      ....+..+.  ++....+.|+.+-.+
T Consensus       135 ~~~~~~~~~--~~~~~i~r~~~v~g~  158 (307)
T d1qyca_         135 KVRRAIEAE--GIPYTYVSSNCFAGY  158 (307)
T ss_dssp             HHHHHHHHH--TCCBEEEECCEEHHH
T ss_pred             cccchhhcc--CCCceecccceecCC
Confidence            444333333  566677888777543

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.10  E-value=1.9e-09  Score=87.80  Aligned_cols=148  Identities=14%  Similarity=0.038  Sum_probs=95.4

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHH-HHHHHHHHHHhCCC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQR-KNLINQTIEKFGKI   90 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v-~~~~~~~~~~~~~i   90 (226)
                      -|+|+||||||.||.+++++|+++|++|+++.|+..+...  .++ .....+.++++|++++.+. +.+       +...
T Consensus         3 kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~--~~~-~~~~~v~~~~gD~~d~~~~~~~a-------~~~~   72 (350)
T d1xgka_           3 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EEL-QAIPNVTLFQGPLLNNVPLMDTL-------FEGA   72 (350)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHH-HTSTTEEEEESCCTTCHHHHHHH-------HTTC
T ss_pred             CCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhh--hhh-cccCCCEEEEeeCCCcHHHHHHH-------hcCC
Confidence            4899999999999999999999999999999998876432  222 2234688899999997653 222       3478


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCC--CCCCchhhHhHHHHH
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP--QSSMAMYGVTKTALL  168 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~--~~~~~~Y~~sKaa~~  168 (226)
                      |.++++......                 .|+....+++.++...  ...+++..||......  ......|..+|...+
T Consensus        73 ~~~~~~~~~~~~-----------------~~~~~~~~~~~aa~~a--gv~~~v~~Ss~~~~~~~~~~~~~~~~~~k~~~~  133 (350)
T d1xgka_          73 HLAFINTTSQAG-----------------DEIAIGKDLADAAKRA--GTIQHYIYSSMPDHSLYGPWPAVPMWAPKFTVE  133 (350)
T ss_dssp             SEEEECCCSTTS-----------------CHHHHHHHHHHHHHHH--SCCSEEEEEECCCGGGTSSCCCCTTTHHHHHHH
T ss_pred             ceEEeecccccc-----------------hhhhhhhHHHHHHHHh--CCCceEEEeeccccccCCcccchhhhhhHHHHH
Confidence            888766543220                 1222333444444332  1236777787655432  233456777887666


Q ss_pred             HHHHHHHHHhCCCeEEEEEecCceeC
Q 027248          169 GLTKALAAEMAPDTRVNCVAPGFVPT  194 (226)
Q Consensus       169 ~~~~~la~e~~~~i~v~~v~Pg~v~t  194 (226)
                      .+.+.+      ++....+.|++...
T Consensus       134 ~~~~~~------~~~~~~vr~~~~~~  153 (350)
T d1xgka_         134 NYVRQL------GLPSTFVYAGIYNN  153 (350)
T ss_dssp             HHHHTS------SSCEEEEEECEEGG
T ss_pred             HHHHhh------ccCceeeeeceeec
Confidence            654432      45666777776544

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.10  E-value=1.1e-15  Score=115.31  Aligned_cols=48  Identities=23%  Similarity=0.380  Sum_probs=42.7

Q ss_pred             EEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCc
Q 027248           15 AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIE   62 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~   62 (226)
                      +.|+||+|++|+++++.|++.|++|++.+|+++++++..+++.+....
T Consensus         3 i~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~~~~   50 (212)
T d1jaya_           3 VALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGD   50 (212)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSS
T ss_pred             EEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCC
Confidence            667788899999999999999999999999999999999888766443

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.09  E-value=6e-10  Score=88.46  Aligned_cols=158  Identities=18%  Similarity=0.205  Sum_probs=98.1

Q ss_pred             EEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH--HhCCCC
Q 027248           15 AIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE--KFGKID   91 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~--~~~~id   91 (226)
                      ||||||+|.||..++++|+++|+ .|+.+++-...... . .+.+.      ..+|..+.+.   +......  .+..++
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~-~-~~~~~------~~~~~~~~~~---~~~~~~~~~~~~~~~   70 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-V-NLVDL------NIADYMDKED---FLIQIMAGEEFGDVE   70 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGG-H-HHHTS------CCSEEEEHHH---HHHHHHTTCCCSSCC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchh-h-ccccc------chhhhccchH---HHHHHhhhhcccchh
Confidence            89999999999999999999996 58777643322111 1 11110      1123333332   3333332  235788


Q ss_pred             EEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCC-----------CCCCchh
Q 027248           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP-----------QSSMAMY  160 (226)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~-----------~~~~~~Y  160 (226)
                      +++|.|+.....    ..   +.......|+.+...+.+++...-   -++++.||.....+           .++...|
T Consensus        71 ~i~~~aa~~~~~----~~---~~~~~~~~~~~~~~~~l~~~~~~~---i~~v~~ss~~~~~~~~~~~~~~~~~~~~~~~Y  140 (307)
T d1eq2a_          71 AIFHEGACSSTT----EW---DGKYMMDNNYQYSKELLHYCLERE---IPFLYASSAATYGGRTSDFIESREYEKPLNVY  140 (307)
T ss_dssp             EEEECCSCCCTT----CC---CHHHHHHHTHHHHHHHHHHHHHHT---CCEEEEEEGGGGTTCCSCBCSSGGGCCCSSHH
T ss_pred             hhhhhccccccc----cc---cccccccccccccccccccccccc---cccccccccccccccccccccccccccccccc
Confidence            899988754311    11   224566777888888877766542   24555555544321           2456789


Q ss_pred             hHhHHHHHHHHHHHHHHhCCCeEEEEEecCceeCC
Q 027248          161 GVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTH  195 (226)
Q Consensus       161 ~~sKaa~~~~~~~la~e~~~~i~v~~v~Pg~v~t~  195 (226)
                      +.+|.+.+.+++.+..++  ++.+..+.|..+.-|
T Consensus       141 ~~~K~~~e~~~~~~~~~~--~~~~~~~r~~~vyGp  173 (307)
T d1eq2a_         141 GYSKFLFDEYVRQILPEA--NSQIVGFRYFNVYGP  173 (307)
T ss_dssp             HHHHHHHHHHHHHHGGGC--SSCEEEEEECEEESS
T ss_pred             ccccchhhhhcccccccc--ccccccccceeEeec
Confidence            999999999999887775  456666666655544

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=98.50  E-value=1.7e-07  Score=69.61  Aligned_cols=112  Identities=17%  Similarity=0.164  Sum_probs=74.9

Q ss_pred             CCCEEEE-EcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH-HhC
Q 027248           11 QGKVAIV-TASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE-KFG   88 (226)
Q Consensus        11 ~gk~vlI-tGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~-~~~   88 (226)
                      .|.+++| +||+|++|.+.++.....|++|+.+.|+.+..++..+.+.+.+.+..+. .|-.+..+....+.++.+ ..+
T Consensus        28 ~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad~vi~-~~~~~~~~~~~~v~~~~~~~g~  106 (189)
T d1gu7a2          28 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVIT-EDQNNSREFGPTIKEWIKQSGG  106 (189)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEE-HHHHHCGGGHHHHHHHHHHHTC
T ss_pred             CCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccccEEEe-ccccchhHHHHHHHHHHhhccC
Confidence            3555555 6999999999998888899999999999988888887777777665432 221111222333333333 445


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCC
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG  150 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~  150 (226)
                      .+|+++++.|..            .               +...+..++++|++|.+++.++
T Consensus       107 ~vdvv~D~vg~~------------~---------------~~~~~~~l~~~G~~v~~G~~~~  141 (189)
T d1gu7a2         107 EAKLALNCVGGK------------S---------------STGIARKLNNNGLMLTYGGMSF  141 (189)
T ss_dssp             CEEEEEESSCHH------------H---------------HHHHHHTSCTTCEEEECCCCSS
T ss_pred             CceEEEECCCcc------------h---------------hhhhhhhhcCCcEEEEECCccC
Confidence            799999887631            0               1233455677899998876544

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.41  E-value=5.1e-07  Score=66.24  Aligned_cols=106  Identities=17%  Similarity=0.144  Sum_probs=71.4

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      -+|.++||+||+||+|...++-....|++|+.+++++++.+...    +.+.+..+   |-.+.  .++....+  ..+.
T Consensus        30 ~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~----~lGa~~vi---~~~~~--~~~~~~~~--~~~g   98 (176)
T d1xa0a2          30 PERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR----VLGAKEVL---AREDV--MAERIRPL--DKQR   98 (176)
T ss_dssp             GGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH----HTTCSEEE---ECC-----------C--CSCC
T ss_pred             CCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHH----hcccceee---ecchh--HHHHHHHh--hccC
Confidence            35889999999999999999988899999999999998865443    23444432   32221  11111111  1247


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCC
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP  153 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~  153 (226)
                      +|+++.+.|...                           ....+..++.+|+++.++...+..+
T Consensus        99 vD~vid~vgg~~---------------------------~~~~l~~l~~~Griv~~G~~~g~~~  135 (176)
T d1xa0a2          99 WAAAVDPVGGRT---------------------------LATVLSRMRYGGAVAVSGLTGGAEV  135 (176)
T ss_dssp             EEEEEECSTTTT---------------------------HHHHHHTEEEEEEEEECSCCSSSCC
T ss_pred             cCEEEEcCCchh---------------------------HHHHHHHhCCCceEEEeecccCccc
Confidence            999999998532                           2344556677899999998876543

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=98.38  E-value=3.3e-07  Score=67.55  Aligned_cols=104  Identities=14%  Similarity=0.240  Sum_probs=72.9

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      +|.+++|+||+|++|.+.++.....|++|+.+++++++.+.    +.+.+.+..+   |-.+++..+...+..  ..+.+
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~----~~~~Ga~~vi---~~~~~~~~~~~~~~~--~~~Gv   99 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAY----LKQIGFDAAF---NYKTVNSLEEALKKA--SPDGY   99 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHH----HHHTTCSEEE---ETTSCSCHHHHHHHH--CTTCE
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHH----HHhhhhhhhc---ccccccHHHHHHHHh--hcCCC
Confidence            48999999999999999999999999999999998766433    3333544433   444444443333322  12479


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCC
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG  150 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~  150 (226)
                      |+++++.|..                           ..+..+..++++|+++.+.....
T Consensus       100 d~v~D~vG~~---------------------------~~~~~~~~l~~~G~~v~~G~~~~  132 (182)
T d1v3va2         100 DCYFDNVGGE---------------------------FLNTVLSQMKDFGKIAICGAISV  132 (182)
T ss_dssp             EEEEESSCHH---------------------------HHHHHGGGEEEEEEEEECCCGGG
T ss_pred             ceeEEecCch---------------------------hhhhhhhhccCCCeEEeecceee
Confidence            9999988731                           13456677778899998876544

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=98.33  E-value=3e-06  Score=62.32  Aligned_cols=85  Identities=14%  Similarity=0.275  Sum_probs=65.6

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHH---HHhcCCcEEEEEeeCCCHHHHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVK---LKARGIEVIGVVCHVSNGQQRKNLINQ   82 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~---~~~~~~~~~~~~~Dv~~~~~v~~~~~~   82 (226)
                      ..+++||+|+|.|+ ||.|++++..|.+.|. ++.++.|+.++.++....   +.... .......|+.+.+....... 
T Consensus        13 ~~~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-   89 (182)
T d1vi2a1          13 GFDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENT-DCVVTVTDLADQQAFAEALA-   89 (182)
T ss_dssp             TCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHS-SCEEEEEETTCHHHHHHHHH-
T ss_pred             CCCcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhc-CcceEeeecccccchhhhhc-
Confidence            45789999999998 6999999999999997 599999998877765543   33322 34455789999887665544 


Q ss_pred             HHHHhCCCCEEEEcCCCC
Q 027248           83 TIEKFGKIDVVVSNAAAN  100 (226)
Q Consensus        83 ~~~~~~~id~li~nag~~  100 (226)
                            ..|++||+....
T Consensus        90 ------~~diiIN~Tp~G  101 (182)
T d1vi2a1          90 ------SADILTNGTKVG  101 (182)
T ss_dssp             ------TCSEEEECSSTT
T ss_pred             ------ccceeccccCCc
Confidence                  889999998654

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.29  E-value=5.5e-07  Score=66.20  Aligned_cols=77  Identities=18%  Similarity=0.303  Sum_probs=56.0

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh--C
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF--G   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--~   88 (226)
                      +|++++|+||+|++|...++.....|++|+++++++++.+.    +.+.+.+..   .|-.+++-.    +++.+..  .
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~----l~~~Ga~~v---i~~~~~~~~----~~v~~~t~~~   93 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREM----LSRLGVEYV---GDSRSVDFA----DEILELTDGY   93 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHH----HHTTCCSEE---EETTCSTHH----HHHHHHTTTC
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeecccccccc----ccccccccc---ccCCccCHH----HHHHHHhCCC
Confidence            47899999999999999999888899999999998766533    334455432   255555433    3444433  3


Q ss_pred             CCCEEEEcCC
Q 027248           89 KIDVVVSNAA   98 (226)
Q Consensus        89 ~id~li~nag   98 (226)
                      .+|+++++.|
T Consensus        94 g~d~v~d~~g  103 (183)
T d1pqwa_          94 GVDVVLNSLA  103 (183)
T ss_dssp             CEEEEEECCC
T ss_pred             CEEEEEeccc
Confidence            6999999887

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=98.28  E-value=5.6e-06  Score=59.87  Aligned_cols=105  Identities=16%  Similarity=0.203  Sum_probs=71.3

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh-CC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF-GK   89 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-~~   89 (226)
                      .|.+++|+| +|++|...++.+...|++|+++++++++++.+.+    .+.+..+ ..| ...++.....+++.+.. +.
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~----~ga~~~~-~~~-~~~~~~~~~~~~~~~~~g~g   98 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN----CGADVTL-VVD-PAKEEESSIIERIRSAIGDL   98 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----TTCSEEE-ECC-TTTSCHHHHHHHHHHHSSSC
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHH----cCCcEEE-ecc-ccccccchhhhhhhcccccC
Confidence            578999997 6899999999888999999999999987654433    2333332 222 22233444555665554 36


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEecc
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~  148 (226)
                      +|++|.++|...                          ..+.++..++++|+++.++-.
T Consensus        99 ~D~vid~~g~~~--------------------------~~~~a~~~~~~~G~iv~~G~~  131 (170)
T d1e3ja2          99 PNVTIDCSGNEK--------------------------CITIGINITRTGGTLMLVGMG  131 (170)
T ss_dssp             CSEEEECSCCHH--------------------------HHHHHHHHSCTTCEEEECSCC
T ss_pred             CceeeecCCChH--------------------------HHHHHHHHHhcCCceEEEecC
Confidence            999999998511                          133444556778999988744

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=98.28  E-value=9.2e-07  Score=64.74  Aligned_cols=105  Identities=16%  Similarity=0.181  Sum_probs=71.8

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      .|++++|+||+|++|...++.....|++|+.+++++++.+... ++   |.+..   .|-++++-.+++.+..  ....+
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~-~l---Ga~~v---i~~~~~d~~~~v~~~t--~g~g~   98 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL-KA---GAWQV---INYREEDLVERLKEIT--GGKKV   98 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HH---TCSEE---EETTTSCHHHHHHHHT--TTCCE
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHH-hc---CCeEE---EECCCCCHHHHHHHHh--CCCCe
Confidence            4899999999999999999999899999999999998875543 23   44432   3766655444332211  12368


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCc
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY  151 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~  151 (226)
                      |+++.+.|...                           .+.....++++|+++.++.....
T Consensus        99 d~v~d~~g~~~---------------------------~~~~~~~l~~~G~~v~~g~~~~~  132 (179)
T d1qora2          99 RVVYDSVGRDT---------------------------WERSLDCLQRRGLMVSFGNSSGA  132 (179)
T ss_dssp             EEEEECSCGGG---------------------------HHHHHHTEEEEEEEEECCCTTCC
T ss_pred             EEEEeCccHHH---------------------------HHHHHHHHhcCCeeeecccccCC
Confidence            99998887411                           12334456677888887766543

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.20  E-value=2.8e-06  Score=61.64  Aligned_cols=75  Identities=16%  Similarity=0.128  Sum_probs=56.2

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      ++|.|+|.|| |.+|+.+++.|+++|++|++++|+.++.+.+.+++    ........+.......+..+.       ..
T Consensus         1 ~~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~----~~~~~~~~~~~~~~~~~~~i~-------~~   68 (182)
T d1e5qa1           1 ATKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV----QHSTPISLDVNDDAALDAEVA-------KH   68 (182)
T ss_dssp             CCCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTC----TTEEEEECCTTCHHHHHHHHT-------TS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcc----cccccccccccchhhhHhhhh-------cc
Confidence            3699999987 99999999999999999999999998877665433    345555566666665555443       66


Q ss_pred             CEEEEcC
Q 027248           91 DVVVSNA   97 (226)
Q Consensus        91 d~li~na   97 (226)
                      |.++...
T Consensus        69 ~~~i~~~   75 (182)
T d1e5qa1          69 DLVISLI   75 (182)
T ss_dssp             SEEEECS
T ss_pred             ceeEeec
Confidence            7776544

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.19  E-value=2.4e-06  Score=62.22  Aligned_cols=102  Identities=14%  Similarity=0.204  Sum_probs=69.3

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      +|++++|+||+|++|...++.....|++|+.+++++++.+.+    .+.+.+..   .|.++++..+++.+...  ...+
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~----~~~Ga~~v---i~~~~~~~~~~i~~~t~--~~g~   98 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV----LQNGAHEV---FNHREVNYIDKIKKYVG--EKGI   98 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH----HHTTCSEE---EETTSTTHHHHHHHHHC--TTCE
T ss_pred             CCCEEEEEeccccccccccccccccCcccccccccccccccc----cccCcccc---cccccccHHHHhhhhhc--cCCc
Confidence            589999999999999999999989999999999887665433    23344432   37776654443333221  1369


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEecc
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~  148 (226)
                      |+++.+.|.            +.               .+..+..++++|++|.++..
T Consensus        99 d~v~d~~g~------------~~---------------~~~~~~~l~~~G~iv~~G~~  129 (174)
T d1yb5a2          99 DIIIEMLAN------------VN---------------LSKDLSLLSHGGRVIVVGSR  129 (174)
T ss_dssp             EEEEESCHH------------HH---------------HHHHHHHEEEEEEEEECCCC
T ss_pred             eEEeecccH------------HH---------------HHHHHhccCCCCEEEEEecC
Confidence            999988762            00               23334556778999998643

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.00  E-value=2.6e-06  Score=62.88  Aligned_cols=104  Identities=17%  Similarity=0.255  Sum_probs=64.5

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEE-EEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVV-VSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      +++|+|+||+||+|...++-....|++++ .+++++++......++   +.+..   .|.++++..+. ++++.  ...+
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~---gad~v---i~~~~~~~~~~-~~~~~--~~Gv  101 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSEL---GFDAA---VNYKTGNVAEQ-LREAC--PGGV  101 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHS---CCSEE---EETTSSCHHHH-HHHHC--TTCE
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcc---cceEE---eeccchhHHHH-HHHHh--ccCc
Confidence            48999999999999999988888998754 4566665555544443   33332   26665543332 22222  2369


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCc
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY  151 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~  151 (226)
                      |+++.+.|.            +.               .+..+..++++|+++.+.+.++.
T Consensus       102 Dvv~D~vGg------------~~---------------~~~~~~~l~~~G~iv~~G~~s~~  135 (187)
T d1vj1a2         102 DVYFDNVGG------------DI---------------SNTVISQMNENSHIILCGQISQY  135 (187)
T ss_dssp             EEEEESSCH------------HH---------------HHHHHTTEEEEEEEEEC------
T ss_pred             eEEEecCCc------------hh---------------HHHHhhhccccccEEEecccccc
Confidence            999998873            11               23455667778999988776553

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.00  E-value=0.00011  Score=52.90  Aligned_cols=103  Identities=18%  Similarity=0.249  Sum_probs=69.0

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh-C
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF-G   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-~   88 (226)
                      .|.+++|.|+ |++|...+..+...|+ +|+++++++++++.+. ++   |.+.. +..+-.+..+   ..+.+.... .
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~-~~---Ga~~~-~~~~~~~~~~---~~~~~~~~~g~   96 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EI---GADLV-LQISKESPQE---IARKVEGQLGC   96 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HT---TCSEE-EECSSCCHHH---HHHHHHHHHTS
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHH-Hh---CCccc-cccccccccc---ccccccccCCC
Confidence            4789999986 9999999999999998 6999999988776442 33   43332 2223333333   333333333 4


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEecc
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~  148 (226)
                      .+|++|.+.|...                          ..+.++..++++|++++++-.
T Consensus        97 g~Dvvid~~G~~~--------------------------~~~~a~~~~~~gG~iv~~G~~  130 (171)
T d1pl8a2          97 KPEVTIECTGAEA--------------------------SIQAGIYATRSGGTLVLVGLG  130 (171)
T ss_dssp             CCSEEEECSCCHH--------------------------HHHHHHHHSCTTCEEEECSCC
T ss_pred             CceEEEeccCCch--------------------------hHHHHHHHhcCCCEEEEEecC
Confidence            7999999998521                          134455566778999988744

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.99  E-value=1.2e-05  Score=57.68  Aligned_cols=73  Identities=26%  Similarity=0.318  Sum_probs=56.1

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      ++++|+++|.|+ |++|..+++.|...|+ ++.++.|+.++.+.+.+++.   .++    .++   +++.+.       .
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~---~~~----~~~---~~~~~~-------l   82 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG---GEA----VRF---DELVDH-------L   82 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT---CEE----CCG---GGHHHH-------H
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhh---ccc----ccc---hhHHHH-------h
Confidence            678999999998 9999999999999998 59999999988888877763   221    122   222222       2


Q ss_pred             CCCCEEEEcCCC
Q 027248           88 GKIDVVVSNAAA   99 (226)
Q Consensus        88 ~~id~li~nag~   99 (226)
                      ...|++|++.+.
T Consensus        83 ~~~Divi~atss   94 (159)
T d1gpja2          83 ARSDVVVSATAA   94 (159)
T ss_dssp             HTCSEEEECCSS
T ss_pred             ccCCEEEEecCC
Confidence            389999998875

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.95  E-value=1.1e-05  Score=59.01  Aligned_cols=102  Identities=13%  Similarity=0.167  Sum_probs=68.3

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh--
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF--   87 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--   87 (226)
                      +|.+++|+|+ |++|...++.+...|+ +|+++++++++++.+ +++   |.+..+   |.++.+ ..+..+.+.+..  
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a-~~l---Ga~~vi---~~~~~~-~~~~~~~i~~~~~~   98 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLA-EEI---GADLTL---NRRETS-VEERRKAIMDITHG   98 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH-HHT---TCSEEE---ETTTSC-HHHHHHHHHHHTTT
T ss_pred             CCCEEEEECC-Cccchhheeccccccccccccccccccccccc-ccc---cceEEE---eccccc-hHHHHHHHHHhhCC
Confidence            5899999987 8999999999999998 699999999877544 333   433322   444332 223344444433  


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEec
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISS  147 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS  147 (226)
                      ..+|++|.+.|...                          ..+.++..++++|+++.++-
T Consensus        99 ~g~Dvvid~vG~~~--------------------------~~~~a~~~l~~~G~iv~~G~  132 (182)
T d1vj0a2          99 RGADFILEATGDSR--------------------------ALLEGSELLRRGGFYSVAGV  132 (182)
T ss_dssp             SCEEEEEECSSCTT--------------------------HHHHHHHHEEEEEEEEECCC
T ss_pred             CCceEEeecCCchh--------------------------HHHHHHHHhcCCCEEEEEee
Confidence            25999999988532                          12344455667889888763

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.95  E-value=8.9e-06  Score=56.37  Aligned_cols=71  Identities=11%  Similarity=0.236  Sum_probs=55.9

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCEE
Q 027248           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVV   93 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~l   93 (226)
                      +|+|.|+ |.+|+.+++.|.+.|++|++++++++..+...+++     ...++..|.++++..+++      .....|.+
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~-----~~~vi~Gd~~~~~~l~~~------~i~~a~~v   69 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI-----DALVINGDCTKIKTLEDA------GIEDADMY   69 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-----SSEEEESCTTSHHHHHHT------TTTTCSEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhh-----hhhhccCcccchhhhhhc------Chhhhhhh
Confidence            3888997 99999999999999999999999998877654432     356788999999976554      12367777


Q ss_pred             EEc
Q 027248           94 VSN   96 (226)
Q Consensus        94 i~n   96 (226)
                      +..
T Consensus        70 v~~   72 (132)
T d1lssa_          70 IAV   72 (132)
T ss_dssp             EEC
T ss_pred             ccc
Confidence            753

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.93  E-value=2.1e-05  Score=56.76  Aligned_cols=103  Identities=15%  Similarity=0.155  Sum_probs=68.4

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      .|.+++|+|++|++|...+..+...|. +|+++++++++++.+.+ +   +.+..   .|-++++..++..+...  .+.
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~-~---Ga~~~---i~~~~~~~~~~~~~~~~--~~~   97 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR-A---GADYV---INASMQDPLAEIRRITE--SKG   97 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH-H---TCSEE---EETTTSCHHHHHHHHTT--TSC
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHH-c---CCcee---eccCCcCHHHHHHHHhh--ccc
Confidence            578999999999999999999998895 78899998876654432 2   43332   25555444333332211  236


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEecc
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~  148 (226)
                      +|++|.++|...               .           .+.++..++++|+|+.++-.
T Consensus        98 ~d~vid~~g~~~---------------~-----------~~~a~~~l~~~G~iv~~G~~  130 (170)
T d1jvba2          98 VDAVIDLNNSEK---------------T-----------LSVYPKALAKQGKYVMVGLF  130 (170)
T ss_dssp             EEEEEESCCCHH---------------H-----------HTTGGGGEEEEEEEEECCSS
T ss_pred             chhhhcccccch---------------H-----------HHhhhhhcccCCEEEEeccc
Confidence            999999987521               1           12345566778899988643

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.89  E-value=9.6e-06  Score=50.71  Aligned_cols=44  Identities=23%  Similarity=0.194  Sum_probs=38.5

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHH
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAV   53 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~   53 (226)
                      -+|++++|+||+||+|....+.+...|++|+.+.+++++.+...
T Consensus        30 ~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~   73 (77)
T d1o8ca2          30 PQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLK   73 (77)
T ss_dssp             GGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH
T ss_pred             cCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHHH
Confidence            35789999999999999999988889999999999998875543

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.88  E-value=1.3e-05  Score=58.02  Aligned_cols=78  Identities=12%  Similarity=0.170  Sum_probs=58.9

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      ..+++||.++|.|+ ||-+++++..|.+.|.++.++.|+.++.+...+.+.+.+ .+..+  +..+.            .
T Consensus        13 ~~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~-~~~~~--~~~~~------------~   76 (170)
T d1nyta1          13 SFIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG-SIQAL--SMDEL------------E   76 (170)
T ss_dssp             TCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS-SEEEC--CSGGG------------T
T ss_pred             CCCCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcc-ccccc--ccccc------------c
Confidence            45688999999997 788999999999999999999999999988888776544 22222  22111            1


Q ss_pred             hCCCCEEEEcCCCC
Q 027248           87 FGKIDVVVSNAAAN  100 (226)
Q Consensus        87 ~~~id~li~nag~~  100 (226)
                      ....|++||+....
T Consensus        77 ~~~~dliIN~Tp~G   90 (170)
T d1nyta1          77 GHEFDLIINATSSG   90 (170)
T ss_dssp             TCCCSEEEECCSCG
T ss_pred             ccccceeecccccC
Confidence            13789999987543

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.82  E-value=4.2e-05  Score=55.30  Aligned_cols=98  Identities=17%  Similarity=0.322  Sum_probs=64.2

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      +|++++|+||+|++|...++.....|++|+.+++++++.+...    +.+.+..+   |..+..      +++ .....+
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~----~lGa~~~i---~~~~~~------~~~-~~~~g~   92 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL----ALGAEEAA---TYAEVP------ERA-KAWGGL   92 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH----HTTCSEEE---EGGGHH------HHH-HHTTSE
T ss_pred             CCCEEEEEeccccchhhhhhhhccccccccccccccccccccc----ccccceee---ehhhhh------hhh-hccccc
Confidence            6899999999999999999988889999999999887765543    23444332   443221      122 234579


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCC
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG  150 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~  150 (226)
                      |+++.+.|- .                           +...+..++++|+++.++...+
T Consensus        93 D~v~d~~G~-~---------------------------~~~~~~~l~~~G~~v~~G~~~g  124 (171)
T d1iz0a2          93 DLVLEVRGK-E---------------------------VEESLGLLAHGGRLVYIGAAEG  124 (171)
T ss_dssp             EEEEECSCT-T---------------------------HHHHHTTEEEEEEEEEC-----
T ss_pred             cccccccch-h---------------------------HHHHHHHHhcCCcEEEEeCCCC
Confidence            999986651 0                           1123455667889998875443

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.80  E-value=5.7e-05  Score=54.64  Aligned_cols=78  Identities=14%  Similarity=0.195  Sum_probs=59.4

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      +.+++||+++|.|+ ||-+++++..|.+.+.+|.++.|+.++.+...+.+.... ++.....|..              .
T Consensus        13 ~~~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~-~~~~~~~~~~--------------~   76 (171)
T d1p77a1          13 NWLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG-NIQAVSMDSI--------------P   76 (171)
T ss_dssp             TCCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS-CEEEEEGGGC--------------C
T ss_pred             CCCCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhcc-ccchhhhccc--------------c
Confidence            45788999999876 778999999999988889999999999998888886543 3444333321              1


Q ss_pred             hCCCCEEEEcCCCC
Q 027248           87 FGKIDVVVSNAAAN  100 (226)
Q Consensus        87 ~~~id~li~nag~~  100 (226)
                      ....|++||+....
T Consensus        77 ~~~~diiIN~tp~g   90 (171)
T d1p77a1          77 LQTYDLVINATSAG   90 (171)
T ss_dssp             CSCCSEEEECCCC-
T ss_pred             ccccceeeeccccc
Confidence            24799999998754

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.79  E-value=7.2e-05  Score=53.76  Aligned_cols=75  Identities=20%  Similarity=0.250  Sum_probs=54.4

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      .|.+++|.|+ |++|...++.+...|++++++++++++.+. .+++   +.+..   .|..+++....       ..+.+
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~-a~~l---Gad~~---i~~~~~~~~~~-------~~~~~   94 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREA-AKAL---GADEV---VNSRNADEMAA-------HLKSF   94 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHHH---TCSEE---EETTCHHHHHT-------TTTCE
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHH-Hhcc---CCcEE---EECchhhHHHH-------hcCCC
Confidence            5899999986 899999998888899999999998887643 3344   43332   36666554321       22479


Q ss_pred             CEEEEcCCCC
Q 027248           91 DVVVSNAAAN  100 (226)
Q Consensus        91 d~li~nag~~  100 (226)
                      |++|.+.|..
T Consensus        95 D~vid~~g~~  104 (168)
T d1uufa2          95 DFILNTVAAP  104 (168)
T ss_dssp             EEEEECCSSC
T ss_pred             ceeeeeeecc
Confidence            9999999853

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.77  E-value=2.2e-05  Score=57.02  Aligned_cols=77  Identities=19%  Similarity=0.243  Sum_probs=53.6

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh--
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF--   87 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--   87 (226)
                      +|.+++|.|+ |++|...++.+...|+ +|+.+++++++++... ++   |.+..   +|..+++..    +++.+..  
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~-~l---Ga~~~---i~~~~~~~~----~~v~~~t~g   94 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAK-FY---GATDI---LNYKNGHIE----DQVMKLTNG   94 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHH-HH---TCSEE---ECGGGSCHH----HHHHHHTTT
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHH-hh---Ccccc---ccccchhHH----HHHHHHhhc
Confidence            4789999986 8999999999998997 5999999887765443 33   33222   255544333    3344433  


Q ss_pred             CCCCEEEEcCCC
Q 027248           88 GKIDVVVSNAAA   99 (226)
Q Consensus        88 ~~id~li~nag~   99 (226)
                      ..+|++|.++|.
T Consensus        95 ~G~D~vid~~g~  106 (174)
T d1jqba2          95 KGVDRVIMAGGG  106 (174)
T ss_dssp             SCEEEEEECSSC
T ss_pred             cCcceEEEccCC
Confidence            259999999985

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.64  E-value=1.9e-05  Score=54.70  Aligned_cols=73  Identities=15%  Similarity=0.179  Sum_probs=54.2

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCE
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~   92 (226)
                      |.++|.|. |-+|+.+++.|.+.|++|++++.+++..+.+.    ..+.  ..+.+|.++++.++++      .....|.
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~----~~~~--~~~~gd~~~~~~l~~a------~i~~a~~   67 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA----SYAT--HAVIANATEENELLSL------GIRNFEY   67 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTT----TTCS--EEEECCTTCTTHHHHH------TGGGCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHH----HhCC--cceeeecccchhhhcc------CCccccE
Confidence            56788876 79999999999999999999999998766553    3332  3566899998876554      1126777


Q ss_pred             EEEcCC
Q 027248           93 VVSNAA   98 (226)
Q Consensus        93 li~nag   98 (226)
                      +|...+
T Consensus        68 vi~~~~   73 (134)
T d2hmva1          68 VIVAIG   73 (134)
T ss_dssp             EEECCC
T ss_pred             EEEEcC
Confidence            775544

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=97.62  E-value=0.00029  Score=50.76  Aligned_cols=100  Identities=11%  Similarity=0.168  Sum_probs=64.7

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeE-EEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh-C
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASV-VVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF-G   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v-~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-~   88 (226)
                      .|.+++|.|+ |++|...++.+...|+++ +++++++++++.+ +++   +... +  .|..+++.    .+++.+.. +
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a-~~~---Ga~~-~--i~~~~~~~----~~~i~~~t~g   95 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA-KQL---GATH-V--INSKTQDP----VAAIKEITDG   95 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HHH---TCSE-E--EETTTSCH----HHHHHHHTTS
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHH-HHc---CCeE-E--EeCCCcCH----HHHHHHHcCC
Confidence            4789999987 899999999888889874 5667777665443 334   3322 2  25555443    33343332 5


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEecc
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~  148 (226)
                      .+|++|.+.|...                          ..+.++..++++|+++.++..
T Consensus        96 g~D~vid~~G~~~--------------------------~~~~~~~~~~~~G~i~~~G~~  129 (174)
T d1f8fa2          96 GVNFALESTGSPE--------------------------ILKQGVDALGILGKIAVVGAP  129 (174)
T ss_dssp             CEEEEEECSCCHH--------------------------HHHHHHHTEEEEEEEEECCCC
T ss_pred             CCcEEEEcCCcHH--------------------------HHHHHHhcccCceEEEEEeec
Confidence            7999999998521                          122334456678899988754

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.60  E-value=0.00012  Score=49.03  Aligned_cols=47  Identities=13%  Similarity=0.149  Sum_probs=41.1

Q ss_pred             CcccccccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcch
Q 027248            1 MEKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN   48 (226)
Q Consensus         1 ~~~~~~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~   48 (226)
                      |+.+.+-.+++||+++|.|++ .+|.+.++.|++.|++|++++.....
T Consensus         1 M~~~Pi~l~l~~k~vlVvG~G-~va~~ka~~ll~~ga~v~v~~~~~~~   47 (113)
T d1pjqa1           1 MDHLPIFCQLRDRDCLIVGGG-DVAERKARLLLEAGARLTVNALTFIP   47 (113)
T ss_dssp             CCCEEEEECCBTCEEEEECCS-HHHHHHHHHHHHTTBEEEEEESSCCH
T ss_pred             CCccceEEEeCCCEEEEECCC-HHHHHHHHHHHHCCCeEEEEeccCCh
Confidence            777888889999999999975 59999999999999999988876543

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.60  E-value=0.00047  Score=48.27  Aligned_cols=112  Identities=11%  Similarity=0.077  Sum_probs=65.2

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCC--CeEEEEecCcchHHHHHHHHHhc---CCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEG--ASVVVSSRKQKNVDEAVVKLKAR---GIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      .+++.|.|+ |.+|..++..|+.+|  .+|+++++++++.+....++...   .....+...|.   +           .
T Consensus         5 ~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~---~-----------~   69 (146)
T d1ez4a1           5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY---S-----------D   69 (146)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG---G-----------G
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH---H-----------H
Confidence            357888895 999999999999988  57999999998776655555432   22233333343   1           1


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEe
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~s  146 (226)
                      ...-|++|..+|....  +     .++-.+.+..|..-.-.+.+.+..+ ..++.++++|
T Consensus        70 ~~~adivvitag~~~~--~-----g~~r~~l~~~N~~i~~~~~~~i~~~-~p~aivivvt  121 (146)
T d1ez4a1          70 CKDADLVVITAGAPQK--P-----GESRLDLVNKNLNILSSIVKPVVDS-GFDGIFLVAA  121 (146)
T ss_dssp             GTTCSEEEECCCC-----------------CHHHHHHHHHHHHHHHHHT-TCCSEEEECS
T ss_pred             hccccEEEEecccccC--C-----CCCHHHHHHHHHHHHHHHHHHHhhc-CCCcEEEEeC
Confidence            2378999999997541  1     1122444556654333333333332 1235555555

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.54  E-value=0.00015  Score=52.46  Aligned_cols=42  Identities=24%  Similarity=0.217  Sum_probs=37.0

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHH
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVV   54 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~   54 (226)
                      +|++.|.|+ |.+|.+++..|++.|++|.+.+|++++.+...+
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~   42 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQD   42 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence            488999998 899999999999999999999999877665543

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.54  E-value=0.0002  Score=53.88  Aligned_cols=80  Identities=18%  Similarity=0.159  Sum_probs=55.9

Q ss_pred             cccCCCEEEEEcC----------------CCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCC
Q 027248            8 KRFQGKVAIVTAS----------------TQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS   71 (226)
Q Consensus         8 ~~~~gk~vlItGa----------------~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~   71 (226)
                      .+++||+||||+|                ||..|.++|+++..+|++|.++.-.....         ....+..  ..+.
T Consensus         2 ~dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~---------~p~~~~~--~~~~   70 (223)
T d1u7za_           2 NDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLP---------TPPFVKR--VDVM   70 (223)
T ss_dssp             CTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCC---------CCTTEEE--EECC
T ss_pred             cccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccC---------ccccccc--ceeh
Confidence            3789999999986                57789999999999999998776643210         0112322  3555


Q ss_pred             CHHHHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 027248           72 NGQQRKNLINQTIEKFGKIDVVVSNAAANP  101 (226)
Q Consensus        72 ~~~~v~~~~~~~~~~~~~id~li~nag~~~  101 (226)
                      ..+++..   .+.+.+...|++|++|++..
T Consensus        71 t~~~m~~---~~~~~~~~~D~~i~aAAvsD   97 (223)
T d1u7za_          71 TALEMEA---AVNASVQQQNIFIGCAAVAD   97 (223)
T ss_dssp             SHHHHHH---HHHHHGGGCSEEEECCBCCS
T ss_pred             hhHHHHH---HHHhhhccceeEeeeechhh
Confidence            5555444   44444567899999999864

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.50  E-value=0.00044  Score=48.53  Aligned_cols=114  Identities=14%  Similarity=0.071  Sum_probs=69.5

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCC--eEEEEecCcchHHHHHHHHHhc----CCcEEEEEeeCCCHHHHHHHHHHHH
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKAR----GIEVIGVVCHVSNGQQRKNLINQTI   84 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (226)
                      .++++.|+|+ |.+|..++..|+.+|.  ++++.++++++++....++...    .....+...|.   +          
T Consensus         5 ~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~---~----------   70 (148)
T d1ldna1           5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY---D----------   70 (148)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG---G----------
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH---H----------
Confidence            4678999996 9999999999999883  6999999998877666666543    22233333332   1          


Q ss_pred             HHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEec
Q 027248           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISS  147 (226)
Q Consensus        85 ~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS  147 (226)
                       ....-|++|..+|......    .+.   .+.+..|..-.-.+.+.+..+ ..++.++++|-
T Consensus        71 -~l~daDvvvitag~~~~~~----~~R---~dl~~~N~~i~~~i~~~i~~~-~p~a~~ivvtN  124 (148)
T d1ldna1          71 -DCRDADLVVICAGANQKPG----ETR---LDLVDKNIAIFRSIVESVMAS-GFQGLFLVATN  124 (148)
T ss_dssp             -GTTTCSEEEECCSCCCCTT----TCS---GGGHHHHHHHHHHHHHHHHHH-TCCSEEEECSS
T ss_pred             -HhccceeEEEecccccccC----cch---hHHHHHHHHHHHHHHHHHHhh-CCCceEEEecC
Confidence             1237899999999764221    111   223344543333333333332 23466666653

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=97.45  E-value=0.0022  Score=46.13  Aligned_cols=116  Identities=13%  Similarity=0.058  Sum_probs=64.3

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCC-------eEEEEecCcc--hHHHHHHHHHhcCC-cEEEEEeeCCCHHHHHHHHHH
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGA-------SVVVSSRKQK--NVDEAVVKLKARGI-EVIGVVCHVSNGQQRKNLINQ   82 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~-------~v~~~~r~~~--~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~   82 (226)
                      .+|.||||+|.||..++..|++.+.       .+.+.+..+.  .++...-++..... ....+..- ++..        
T Consensus        25 ~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~-~~~~--------   95 (175)
T d7mdha1          25 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIG-IDPY--------   95 (175)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE-SCHH--------
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCcccc-ccch--------
Confidence            4699999999999999999987431       3556666543  33333334433221 22211111 2222        


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEe
Q 027248           83 TIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (226)
Q Consensus        83 ~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~s  146 (226)
                        +.+...|++|..+|.....    ..+.   .+.+..|..-.-.+.+++..+-.+...|+.+|
T Consensus        96 --~~~~~aDvVvi~ag~~rkp----g~tR---~Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~  150 (175)
T d7mdha1          96 --EVFEDVDWALLIGAKPRGP----GMER---AALLDINGQIFADQGKALNAVASKNVKVLVVG  150 (175)
T ss_dssp             --HHTTTCSEEEECCCCCCCT----TCCH---HHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             --hhccCCceEEEeeccCCCC----CCcH---HHHHHHHHHHHHHHHHHHHhhCCCCcEEEEec
Confidence              2245899999999986421    2333   44555675444444444444433345565554

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.41  E-value=7.7e-05  Score=53.73  Aligned_cols=101  Identities=20%  Similarity=0.199  Sum_probs=68.5

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH--hC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK--FG   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~--~~   88 (226)
                      +|++|||+||+||+|...++.....|++|+.+.+++++.+.+.+    .+.+..+   |-   +   +...+..+.  .+
T Consensus        23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~----lGad~vi---~~---~---~~~~~~~~~~~~~   89 (167)
T d1tt7a2          23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQ----LGASEVI---SR---E---DVYDGTLKALSKQ   89 (167)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHH----HTCSEEE---EH---H---HHCSSCCCSSCCC
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHh----hcccceE---ec---c---chhchhhhcccCC
Confidence            46789999999999999998877889999999999988765433    2444322   21   1   111111111  24


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCc
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY  151 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~  151 (226)
                      .+|+++.+.|..                           .....+..++++|++|.+....+.
T Consensus        90 gvd~vid~vgg~---------------------------~~~~~~~~l~~~G~iv~~G~~~g~  125 (167)
T d1tt7a2          90 QWQGAVDPVGGK---------------------------QLASLLSKIQYGGSVAVSGLTGGG  125 (167)
T ss_dssp             CEEEEEESCCTH---------------------------HHHHHHTTEEEEEEEEECCCSSCS
T ss_pred             CceEEEecCcHH---------------------------HHHHHHHHhccCceEEEeeccCCC
Confidence            799999988741                           123455666778999998877764

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=97.35  E-value=0.00014  Score=52.35  Aligned_cols=99  Identities=12%  Similarity=0.201  Sum_probs=63.7

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCe-EEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      .|.+++|.|+ |++|...++.+...|+. |+.+++++++++...    +.+....   .|-.+ +..+...+..  ....
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~----~~ga~~~---i~~~~-~~~~~~~~~~--~~~g  100 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE----RLGADHV---VDARR-DPVKQVMELT--RGRG  100 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH----HTTCSEE---EETTS-CHHHHHHHHT--TTCC
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHh----hccccee---ecCcc-cHHHHHHHhh--CCCC
Confidence            4789999885 99999999988888864 677888876654433    2343322   24333 3333333221  1236


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEe
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~s  146 (226)
                      +|++|.++|...                          ..+..+..++++|+++.++
T Consensus       101 ~d~vid~~g~~~--------------------------~~~~a~~~l~~~G~iv~~G  131 (172)
T d1h2ba2         101 VNVAMDFVGSQA--------------------------TVDYTPYLLGRMGRLIIVG  131 (172)
T ss_dssp             EEEEEESSCCHH--------------------------HHHHGGGGEEEEEEEEECC
T ss_pred             ceEEEEecCcch--------------------------HHHHHHHHHhCCCEEEEEe
Confidence            999999998521                          1244556677889999876

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.33  E-value=0.0011  Score=46.25  Aligned_cols=116  Identities=18%  Similarity=0.135  Sum_probs=67.7

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCCC--eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCC
Q 027248           14 VAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id   91 (226)
                      ++.|+||+|.+|.+++..|+.+|.  ++++++.++.+.+  ...+....... ....-+ ...+..+.       ...-|
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~--a~Dl~~~~~~~-~~~~~~-~~~~~~~~-------~~~aD   70 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGV--AADLSHIETRA-TVKGYL-GPEQLPDC-------LKGCD   70 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHH--HHHHTTSSSSC-EEEEEE-SGGGHHHH-------HTTCS
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchh--hHHHhhhhhhc-CCCeEE-cCCChHHH-------hCCCC
Confidence            478999999999999999999884  5999998764322  23343222111 111112 22222222       23899


Q ss_pred             EEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEecc
Q 027248           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (226)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~  148 (226)
                      ++|..||.....+    .+.   .+.++.|..-.-.+.+.+..+ ..++.++.+|..
T Consensus        71 ivVitag~~~~~g----~sR---~~ll~~N~~i~~~i~~~i~~~-~p~~iiivvtNP  119 (144)
T d1mlda1          71 VVVIPAGVPRKPG----MTR---DDLFNTNATIVATLTAACAQH-CPDAMICIISNP  119 (144)
T ss_dssp             EEEECCSCCCCTT----CCG---GGGHHHHHHHHHHHHHHHHHH-CTTSEEEECSSC
T ss_pred             EEEECCCcCCCCC----CCc---chHHHHHHHHHHHHHHHHHhc-CCCeEEEEecCc
Confidence            9999999754211    122   234566765555555555444 235667666643

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.33  E-value=0.001  Score=46.42  Aligned_cols=74  Identities=15%  Similarity=0.143  Sum_probs=52.1

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCC--CeEEEEecCcchHHHHHHHHHhc----CCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEG--ASVVVSSRKQKNVDEAVVKLKAR----GIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      |.+.|+|+ |.+|..++..|+.+|  .++++.++++++++....++.+.    ..+......|   .+.           
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d---~~~-----------   66 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIND---WAA-----------   66 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESC---GGG-----------
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccC---HHH-----------
Confidence            67888995 999999999999988  47999999998876665555533    2223332222   221           


Q ss_pred             hCCCCEEEEcCCCCC
Q 027248           87 FGKIDVVVSNAAANP  101 (226)
Q Consensus        87 ~~~id~li~nag~~~  101 (226)
                      ...-|++|..||...
T Consensus        67 l~~adiVVitaG~~~   81 (146)
T d1hyha1          67 LADADVVISTLGNIK   81 (146)
T ss_dssp             GTTCSEEEECCSCGG
T ss_pred             hccccEEEEeccccc
Confidence            237899999999753

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.30  E-value=0.00014  Score=52.76  Aligned_cols=101  Identities=16%  Similarity=0.183  Sum_probs=65.9

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      ++++++|+||+||+|...++.....|++|+.++|++++.+.+ +++   +.+.. +  |-.+++..+    .+.  ....
T Consensus        31 ~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~-~~l---Gad~v-i--~~~~~~~~~----~l~--~~~~   97 (177)
T d1o89a2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL-KSL---GASRV-L--PRDEFAESR----PLE--KQVW   97 (177)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH-HHH---TEEEE-E--EGGGSSSCC----SSC--CCCE
T ss_pred             CCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHH-Hhh---ccccc-c--ccccHHHHH----HHH--hhcC
Confidence            346899999999999999998888999999999999886544 333   33322 2  222211110    110  1246


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCc
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY  151 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~  151 (226)
                      |.+|.+.|..                           .....++.++.+|+||.++...+.
T Consensus        98 ~~vvD~Vgg~---------------------------~~~~~l~~l~~~Griv~~G~~~~~  131 (177)
T d1o89a2          98 AGAIDTVGDK---------------------------VLAKVLAQMNYGGCVAACGLAGGF  131 (177)
T ss_dssp             EEEEESSCHH---------------------------HHHHHHHTEEEEEEEEECCCTTCS
T ss_pred             CeeEEEcchH---------------------------HHHHHHHHhccccceEeecccCCc
Confidence            7777766520                           134556667778999999877664

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.27  E-value=0.0015  Score=45.90  Aligned_cols=115  Identities=17%  Similarity=0.159  Sum_probs=63.5

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCCC---------eEEEEecCcchHHHHHHHHHhcC-CcEEEEEeeCCCHHHHHHHHHHH
Q 027248           14 VAIVTASTQGIGFGIAERLGLEGA---------SVVVSSRKQKNVDEAVVKLKARG-IEVIGVVCHVSNGQQRKNLINQT   83 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g~---------~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~   83 (226)
                      .|.|+||+|.+|..++..|+..+.         +++...++.+.++....++.... .....+...-.+.+         
T Consensus         6 KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------   76 (154)
T d1y7ta1           6 RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKV---------   76 (154)
T ss_dssp             EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHH---------
T ss_pred             EEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCCchhh---------
Confidence            699999999999999999988652         23334444455554444444332 22333322222221         


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEe
Q 027248           84 IEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (226)
Q Consensus        84 ~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~s  146 (226)
                        .+..-|++|..+|....    ...+.+   +.+..|..-.-.+.+.+..+-.+.+.|+.+|
T Consensus        77 --~~~~advViitaG~~~~----pg~~r~---dl~~~N~~i~~~~~~~i~k~a~~~~~vivvs  130 (154)
T d1y7ta1          77 --AFKDADYALLVGAAPRK----AGMERR---DLLQVNGKIFTEQGRALAEVAKKDVKVLVVG  130 (154)
T ss_dssp             --HTTTCSEEEECCCCCCC----TTCCHH---HHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             --hcccccEEEeecCcCCC----CCCcHH---HHHHHHHHHHHHHHHHHHHhCCCCcEEEEec
Confidence              23489999999998542    223443   3345565444444444433322234555554

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=97.24  E-value=0.00022  Score=51.44  Aligned_cols=79  Identities=14%  Similarity=0.218  Sum_probs=53.3

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCC-HHHHHHHHHHHHHHhC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN-GQQRKNLINQTIEKFG   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~~   88 (226)
                      .|.+++|.|+ +|+|...+.++...|+ +|+++++++++.+... ++   +....+   |..+ ++.++...+...  .+
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~-~~---Ga~~~i---~~~~~~~~~~~~~~~~~--~~   97 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK-EV---GATECV---NPQDYKKPIQEVLTEMS--NG   97 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT---TCSEEE---CGGGCSSCHHHHHHHHT--TS
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHH-Hh---CCeeEE---ecCCchhHHHHHHHHHh--cC
Confidence            5789999999 6899999999999985 6899999998865443 22   333222   3222 222333333322  25


Q ss_pred             CCCEEEEcCCC
Q 027248           89 KIDVVVSNAAA   99 (226)
Q Consensus        89 ~id~li~nag~   99 (226)
                      .+|++|.+.|.
T Consensus        98 G~D~vid~~G~  108 (176)
T d2jhfa2          98 GVDFSFEVIGR  108 (176)
T ss_dssp             CBSEEEECSCC
T ss_pred             CCCEEEecCCc
Confidence            89999999885

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=97.21  E-value=0.0032  Score=43.60  Aligned_cols=108  Identities=13%  Similarity=0.159  Sum_probs=63.4

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCC-CeEEEEecCcchHHHHHHHHHhc----CCcEEEEEe-eCCCHHHHHHHHHHHHHH
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEG-ASVVVSSRKQKNVDEAVVKLKAR----GIEVIGVVC-HVSNGQQRKNLINQTIEK   86 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~-Dv~~~~~v~~~~~~~~~~   86 (226)
                      |++.|+|+ |.+|.+++..|+.++ .++++++.+++..+.....+...    .....+..+ |..+              
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~~--------------   66 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYAD--------------   66 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGG--------------
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcHHH--------------
Confidence            56777886 999999999999888 57999999998776655555322    112222212 2211              


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc---CCEEEEEe
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLIS  146 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~---~~~iv~~s  146 (226)
                      ...-|++|.+||.....    ..+   -.+.+..|.    .+.+...+.+.+   ++.++.+|
T Consensus        67 ~~~advvvitag~~~~~----~~~---r~dl~~~N~----~i~~~i~~~i~k~~p~aivivvt  118 (142)
T d1uxja1          67 TANSDVIVVTSGAPRKP----GMS---REDLIKVNA----DITRACISQAAPLSPNAVIIMVN  118 (142)
T ss_dssp             GTTCSEEEECCSCC----------------CHHHHH----HHHHHHHHHHGGGCTTCEEEECS
T ss_pred             hcCCCEEEEeeeccCCc----Ccc---hhHHHhHHH----HHHHHHHHHHhccCCCceEEEeC
Confidence            23789999999975421    111   233445564    355555555543   45555544

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.21  E-value=0.00074  Score=48.72  Aligned_cols=79  Identities=10%  Similarity=0.188  Sum_probs=54.1

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHH-HHHHHHHHHHHhC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQ-RKNLINQTIEKFG   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-v~~~~~~~~~~~~   88 (226)
                      .|.+++|+|+ ||+|...++.+...|+ +|+.+++++++++... ++   +.+..+   |-.+.+. .+...+..  ..+
T Consensus        29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak-~~---GA~~~i---n~~~~~~~~~~~~~~~--~g~   98 (176)
T d1d1ta2          29 PGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAM-AV---GATECI---SPKDSTKPISEVLSEM--TGN   98 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HH---TCSEEE---CGGGCSSCHHHHHHHH--HTS
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHH-hc---CCcEEE---CccccchHHHHHHHHh--ccc
Confidence            5889999986 8999999999999995 7999999999886443 33   333322   3333222 22222221  234


Q ss_pred             CCCEEEEcCCC
Q 027248           89 KIDVVVSNAAA   99 (226)
Q Consensus        89 ~id~li~nag~   99 (226)
                      .+|++|.+.|.
T Consensus        99 G~d~vi~~~g~  109 (176)
T d1d1ta2          99 NVGYTFEVIGH  109 (176)
T ss_dssp             CCCEEEECSCC
T ss_pred             cceEEEEeCCc
Confidence            79999998885

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=97.19  E-value=0.00068  Score=47.60  Aligned_cols=75  Identities=11%  Similarity=0.042  Sum_probs=58.2

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCEE
Q 027248           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVV   93 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~l   93 (226)
                      .++|.|. |.+|+.++++|.++|.++++++.++++.....++....  .+.++.+|.++++..+++-      ..+.|.+
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~--~~~vi~Gd~~d~~~L~~a~------i~~a~~v   75 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGD--NADVIPGDSNDSSVLKKAG------IDRCRAI   75 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCT--TCEEEESCTTSHHHHHHHT------TTTCSEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcC--CcEEEEccCcchHHHHHhc------cccCCEE
Confidence            5788887 69999999999999999999999998776666665543  4677889999998755541      2367788


Q ss_pred             EEcC
Q 027248           94 VSNA   97 (226)
Q Consensus        94 i~na   97 (226)
                      |...
T Consensus        76 i~~~   79 (153)
T d1id1a_          76 LALS   79 (153)
T ss_dssp             EECS
T ss_pred             EEcc
Confidence            7654

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.17  E-value=0.00019  Score=46.27  Aligned_cols=39  Identities=15%  Similarity=0.221  Sum_probs=34.5

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcc
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK   47 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~   47 (226)
                      .+++||+++|.|. |.-|+++++.|.++|++|.+.+.+..
T Consensus         1 ~~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~   39 (93)
T d2jfga1           1 ADYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT   39 (93)
T ss_dssp             CCCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred             CCcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence            3689999999998 56799999999999999999998765

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=97.17  E-value=0.0019  Score=44.87  Aligned_cols=110  Identities=14%  Similarity=0.064  Sum_probs=60.9

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCCC--eEEEEecCcchHHHHHHHHHhcC---CcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248           14 VAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKARG---IEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      .+.|+|+ |.+|..++..++.++.  ++++++++++.++....++....   ........|   .+           ...
T Consensus         3 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~---~~-----------~~~   67 (142)
T d1y6ja1           3 KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGD---YS-----------DVK   67 (142)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--C---GG-----------GGT
T ss_pred             eEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCc---HH-----------HhC
Confidence            4666786 9999999999999884  69999999987766666665431   122222111   11           134


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEe
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~s  146 (226)
                      .-|++|..||....  +  ..+.   ...+..|..-.-.+.+.+..+ ..++.++.+|
T Consensus        68 ~adivvitag~~~~--~--~~~r---~~l~~~N~~i~~~i~~~i~~~-~p~ai~ivvt  117 (142)
T d1y6ja1          68 DCDVIVVTAGANRK--P--GETR---LDLAKKNVMIAKEVTQNIMKY-YNHGVILVVS  117 (142)
T ss_dssp             TCSEEEECCCC----------CH---HHHHHHHHHHHHHHHHHHHHH-CCSCEEEECS
T ss_pred             CCceEEEecccccC--c--Ccch---hHHhhHHHHHHHHHHHHhhcc-CCCceEEEec
Confidence            78999999997542  1  1222   344556654433343333332 1245566555

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=97.14  E-value=0.0055  Score=42.30  Aligned_cols=110  Identities=13%  Similarity=0.100  Sum_probs=66.1

Q ss_pred             EEEEcCCCchhHHHHHHHHhCC--CeEEEEecCcchHHHHHHHHHhc----CCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248           15 AIVTASTQGIGFGIAERLGLEG--ASVVVSSRKQKNVDEAVVKLKAR----GIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      +.|+|+ |.+|..++..|+..|  .++++.++++++++.....+...    ..+..+...+  +.+.           +.
T Consensus         3 I~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~--~~~~-----------~~   68 (142)
T d1guza1           3 ITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSN--DYAD-----------TA   68 (142)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEES--CGGG-----------GT
T ss_pred             EEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEecC--CHHH-----------hc
Confidence            677796 999999999999988  47999999998876555444332    2233333222  2221           23


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEe
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~s  146 (226)
                      .-|++|..+|.....+    .+.   ...+..|..-...+.+.+..+ .+++.++++|
T Consensus        69 dadvvvitag~~~~~g----~~r---~~l~~~N~~i~~~i~~~i~~~-~p~aivivvt  118 (142)
T d1guza1          69 NSDIVIITAGLPRKPG----MTR---EDLLMKNAGIVKEVTDNIMKH-SKNPIIIVVS  118 (142)
T ss_dssp             TCSEEEECCSCCCCTT----CCH---HHHHHHHHHHHHHHHHHHHHH-CSSCEEEECC
T ss_pred             CCeEEEEEEecCCCCC----Cch---HHHHHHHHHHHHHHHHHhhcc-CCCeEEEEec
Confidence            7899999999754221    222   233455554444444444332 2345666655

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.13  E-value=0.0035  Score=44.28  Aligned_cols=112  Identities=12%  Similarity=0.159  Sum_probs=68.5

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCC--eEEEEecCcchHHHHHHHHHhcC---CcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKARG---IEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      +...+.|+|+ |.+|..++..|..+|.  ++++++++++.+.....++....   .....+..+  +.+           
T Consensus        18 ~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~--d~~-----------   83 (159)
T d2ldxa1          18 SRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGK--DYN-----------   83 (159)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEES--SGG-----------
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEecc--chh-----------
Confidence            3346788886 9999999999999984  69999999888776666666432   122222221  121           


Q ss_pred             HhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc---CCEEEEEec
Q 027248           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISS  147 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~---~~~iv~~sS  147 (226)
                      ....-|++|..||......    .+.   .+.++.|    ..+.+...+.+++   ++.++.+|.
T Consensus        84 ~~~~adivvitag~~~~~~----~~R---~dll~~N----~~i~~~i~~~i~~~~p~~ivivvtN  137 (159)
T d2ldxa1          84 VSANSKLVIITAGARMVSG----QTR---LDLLQRN----VAIMKAIVPGVIQNSPDCKIIVVTN  137 (159)
T ss_dssp             GGTTEEEEEECCSCCCCTT----TCS---SCTTHHH----HHHHHHHTTTHHHHSTTCEEEECSS
T ss_pred             hhccccEEEEecccccCCC----CCH---HHHHHHH----HHHHHHHHHHHhccCCCeEEEEeCC
Confidence            1247899999999764221    111   1123334    3445566665543   466666664

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.13  E-value=0.0009  Score=46.83  Aligned_cols=80  Identities=13%  Similarity=0.087  Sum_probs=53.9

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id   91 (226)
                      =|++.|.||.|-+|..+++.|.+.|++|.+.+|++........    ...+..+.   ......+...+.++......=.
T Consensus         9 ~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~~----~~~~~v~~---~~~~~~~~~v~~~~~~~~~~~~   81 (152)
T d2pv7a2           9 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESIL----ANADVVIV---SVPINLTLETIERLKPYLTENM   81 (152)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHH----TTCSEEEE---CSCGGGHHHHHHHHGGGCCTTS
T ss_pred             CCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchhh----hhcccccc---ccchhhheeeeecccccccCCc
Confidence            3789999999999999999999999999999999876544322    23344333   3334455556666655433333


Q ss_pred             EEEEcCC
Q 027248           92 VVVSNAA   98 (226)
Q Consensus        92 ~li~nag   98 (226)
                      +++..+.
T Consensus        82 iiiD~~S   88 (152)
T d2pv7a2          82 LLADLTS   88 (152)
T ss_dssp             EEEECCS
T ss_pred             eEEEecc
Confidence            5555543

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.10  E-value=0.0057  Score=43.17  Aligned_cols=114  Identities=12%  Similarity=0.089  Sum_probs=70.2

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCC--eEEEEecCcchHHHHHHHHHhc---CCcEEEEEeeCCCHHHHHHHHHHHH
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKAR---GIEVIGVVCHVSNGQQRKNLINQTI   84 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (226)
                      ...+.+.|.|+ |.+|..++..|+.+|.  ++++++++++..+.....+...   .........  .+.++         
T Consensus        18 ~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~--~d~~~---------   85 (160)
T d1i0za1          18 VPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVAD--KDYSV---------   85 (160)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEEC--SSGGG---------
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEec--cchhh---------
Confidence            34578888996 9999999999999984  6999999988876666666542   111222211  12221         


Q ss_pred             HHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc---CCEEEEEecc
Q 027248           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSI  148 (226)
Q Consensus        85 ~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~---~~~iv~~sS~  148 (226)
                        ...-|++|..||.....+    .+.   .+.+..|.    .+.+.+.+.+++   ++-++++|..
T Consensus        86 --~~~adiVVitAg~~~~~g----~tR---~~l~~~N~----~i~~~i~~~i~~~~p~aiiivvtNP  139 (160)
T d1i0za1          86 --TANSKIVVVTAGVRQQEG----ESR---LNLVQRNV----NVFKFIIPQIVKYSPDCIIIVVSNP  139 (160)
T ss_dssp             --GTTCSEEEECCSCCCCTT----CCG---GGGHHHHH----HHHHHHHHHHHHHCTTCEEEECSSS
T ss_pred             --cccccEEEEecCCccccC----cch---HHHHHHHH----HHHHHHHHHHHhcCCCcEEEEeCCc
Confidence              247899999999764211    122   23334454    345555555533   4566666643

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=97.09  E-value=0.0021  Score=46.08  Aligned_cols=85  Identities=14%  Similarity=0.166  Sum_probs=62.5

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHH---------------HhcCCcEEEEEeeCCCHHHHH
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKL---------------KARGIEVIGVVCHVSNGQQRK   77 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~---------------~~~~~~~~~~~~Dv~~~~~v~   77 (226)
                      +.|-|.|- |-+|.++++.|++.|++|++.+|++++.+.+.++-               .+.......+...+.+.+.+.
T Consensus         3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~~~~v~   81 (176)
T d2pgda2           3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVD   81 (176)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHH
T ss_pred             CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEecCchHHHH
Confidence            34667765 89999999999999999999999999888765431               111222344556788888888


Q ss_pred             HHHHHHHHHhCCCCEEEEcCC
Q 027248           78 NLINQTIEKFGKIDVVVSNAA   98 (226)
Q Consensus        78 ~~~~~~~~~~~~id~li~nag   98 (226)
                      ++.+.+......=+++|...-
T Consensus        82 ~v~~~l~~~~~~g~iiid~sT  102 (176)
T d2pgda2          82 NFIEKLVPLLDIGDIIIDGGN  102 (176)
T ss_dssp             HHHHHHHHHCCTTCEEEECSC
T ss_pred             HHHHHHHhccccCcEEEecCc
Confidence            888888876655567776553

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=97.08  E-value=0.00086  Score=49.22  Aligned_cols=117  Identities=14%  Similarity=0.151  Sum_probs=68.0

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      .|.+++|.|+ |++|...+......|+ +|+++++++++++.+.    +.+....   .|-.+.+..++..+ +. ....
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~----~~Ga~~~---~~~~~~~~~~~i~~-~t-~g~g   94 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAK----AQGFEIA---DLSLDTPLHEQIAA-LL-GEPE   94 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH----HTTCEEE---ETTSSSCHHHHHHH-HH-SSSC
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhh----hccccEE---EeCCCcCHHHHHHH-Hh-CCCC
Confidence            4889999986 8999888888877887 6888999887765432    2243321   13333332222222 21 2236


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEecc
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~  148 (226)
                      +|++|.+.|.-....+....           +..+.-..++.+...++++|+|+.+.-.
T Consensus        95 ~D~vid~vG~~~~~~~~~~~-----------~~~~~~~~l~~~~~~~r~gG~v~~~G~~  142 (195)
T d1kola2          95 VDCAVDAVGFEARGHGHEGA-----------KHEAPATVLNSLMQVTRVAGKIGIPGLY  142 (195)
T ss_dssp             EEEEEECCCTTCBCSSTTGG-----------GSBCTTHHHHHHHHHEEEEEEEEECSCC
T ss_pred             cEEEEECccccccCCcccce-----------eecCcHHHHHHHHHHHhcCCEEEEeeec
Confidence            99999998854311111101           1112222345555566778899888743

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=97.08  E-value=0.0053  Score=42.46  Aligned_cols=108  Identities=14%  Similarity=0.066  Sum_probs=65.3

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCCC--eEEEEecCc--chHHHHHHHHHh---cCCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248           14 VAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQ--KNVDEAVVKLKA---RGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g~--~v~~~~r~~--~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      ++.|+|++|.+|.+++..+..+|.  ++++.+.+.  +..+....++..   ...+..+...|.   ++           
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~---~~-----------   67 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGY---ED-----------   67 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCG---GG-----------
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCH---HH-----------
Confidence            478999999999999999999983  699998643  333333334432   233344333332   21           


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc---CCEEEEEe
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLIS  146 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~---~~~iv~~s  146 (226)
                      ...-|++|..||....  +  ..+.   .+.++.|.    .+.+...+.+++   ++.++.+|
T Consensus        68 ~~~aDiVvitaG~~~~--~--g~~R---~dl~~~N~----~I~~~i~~~i~~~~p~~i~ivvt  119 (142)
T d1o6za1          68 TAGSDVVVITAGIPRQ--P--GQTR---IDLAGDNA----PIMEDIQSSLDEHNDDYISLTTS  119 (142)
T ss_dssp             GTTCSEEEECCCCCCC--T--TCCH---HHHHHHHH----HHHHHHHHHHHTTCSCCEEEECC
T ss_pred             hhhcCEEEEecccccc--c--CCch---hhHHHHHH----HHHHHHHHHHHhcCCCceEEEec
Confidence            2378999999997542  1  1233   44556665    444555555543   35566655

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.06  E-value=0.0005  Score=49.12  Aligned_cols=100  Identities=21%  Similarity=0.175  Sum_probs=65.1

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      .|.+++|.|+ |++|...++.+...|++|+++++++++++.+. ++   |.+..+   |-.+++.   ..   .+..+.+
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~-~l---Ga~~~i---~~~~~~~---~~---~~~~~~~   92 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM-KM---GADHYI---ATLEEGD---WG---EKYFDTF   92 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HH---TCSEEE---EGGGTSC---HH---HHSCSCE
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhh-cc---CCcEEe---eccchHH---HH---Hhhhccc
Confidence            5899999986 89999988888788999999999998876543 33   433322   3222211   11   1223579


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEecc
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~  148 (226)
                      |+++.+.|.... ..+                       ...+..++++|+++.++-.
T Consensus        93 d~vi~~~~~~~~-~~~-----------------------~~~~~~l~~~G~iv~~G~~  126 (168)
T d1piwa2          93 DLIVVCASSLTD-IDF-----------------------NIMPKAMKVGGRIVSISIP  126 (168)
T ss_dssp             EEEEECCSCSTT-CCT-----------------------TTGGGGEEEEEEEEECCCC
T ss_pred             ceEEEEecCCcc-chH-----------------------HHHHHHhhccceEEEeccc
Confidence            999988775431 110                       1234556677889888643

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=97.03  E-value=0.0046  Score=43.37  Aligned_cols=119  Identities=14%  Similarity=0.044  Sum_probs=67.9

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCC-CeEEEEecCcchHHHHHHHHHhc----CCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEG-ASVVVSSRKQKNVDEAVVKLKAR----GIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      .+++.|.|+ |.+|..++..++..+ .++++.+.+++.++.....+...    +.......  -.+.++   .       
T Consensus         7 ~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~--~~~~~~---~-------   73 (154)
T d1pzga1           7 RKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA--EYSYEA---A-------   73 (154)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE--ECSHHH---H-------
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEec--cCchhh---h-------
Confidence            367888897 999999999888888 57999999998877666655432    11221111  111111   1       


Q ss_pred             hCCCCEEEEcCCCCCCCC-ccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEec
Q 027248           87 FGKIDVVVSNAAANPSVD-SILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISS  147 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~-~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS  147 (226)
                      ...-|++|..+|.....+ +-.+.+.   .+.+..|..-...+.+.+..+ ..++.++.+|.
T Consensus        74 ~~~adiVvitag~~~~~g~~~~~~tR---~~l~~~n~~iv~~i~~~i~~~-~p~aiviivsN  131 (154)
T d1pzga1          74 LTGADCVIVTAGLTKVPGKPDSEWSR---NDLLPFNSKIIREIGQNIKKY-CPKTFIIVVTN  131 (154)
T ss_dssp             HTTCSEEEECCSCSSCTTCCGGGCCG---GGGHHHHHHHHHHHHHHHHHH-CTTCEEEECCS
T ss_pred             hcCCCeEEEecccccCCCCCCcccch---hhhhhhhHHHHHHHHHHHHhc-CCCcEEEEeCC
Confidence            238899999999865322 1111222   223444544333333333322 12456665553

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.01  E-value=0.01  Score=41.03  Aligned_cols=103  Identities=15%  Similarity=0.061  Sum_probs=61.3

Q ss_pred             EEEEcCCCchhHHHHHHHHhCC--CeEEEEecCcc--hHHHHHHHHHhc----CCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248           15 AIVTASTQGIGFGIAERLGLEG--ASVVVSSRKQK--NVDEAVVKLKAR----GIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g--~~v~~~~r~~~--~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      +.|+||+|.+|.+++..|+.+|  .++++++++++  +++....++...    .....+...--.+.+           .
T Consensus         3 V~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~~-----------~   71 (145)
T d1hyea1           3 VTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLR-----------I   71 (145)
T ss_dssp             EEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGG-----------G
T ss_pred             EEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchHH-----------H
Confidence            8899999999999999999998  47999999864  333344444431    222222211111111           1


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhh
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPH  135 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~  135 (226)
                      ...-|++|.+||.....    ..+.   .+.++.|..-.-.+.+.+.++
T Consensus        72 l~~aDvVVitAG~~~~~----g~sR---~dl~~~Na~iv~~i~~~i~~~  113 (145)
T d1hyea1          72 IDESDVVIITSGVPRKE----GMSR---MDLAKTNAKIVGKYAKKIAEI  113 (145)
T ss_dssp             GTTCSEEEECCSCCCCT----TCCH---HHHHHHHHHHHHHHHHHHHHH
T ss_pred             hccceEEEEecccccCC----CCCh---hhhhhhhHHHHHHHHHHHhcc
Confidence            24789999999975421    1233   344556755444444444443

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.00  E-value=0.0029  Score=44.67  Aligned_cols=99  Identities=15%  Similarity=0.228  Sum_probs=64.5

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      .|.+++|.|+ |++|...++.+...|++|+.+++++++++...    +.+.+..   .|.++.+..+.+    .+..+..
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~----~~Ga~~~---i~~~~~~~~~~~----~~~~~g~   94 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELAR----KLGASLT---VNARQEDPVEAI----QRDIGGA   94 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH----HTTCSEE---EETTTSCHHHHH----HHHHSSE
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhh----ccCcccc---ccccchhHHHHH----HHhhcCC
Confidence            4789999886 99999999888889999999999987765432    3344332   255555544433    3333456


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEec
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISS  147 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS  147 (226)
                      |..|.+++..           +.               .+..+..++++|+++.++-
T Consensus        95 ~~~i~~~~~~-----------~~---------------~~~~~~~l~~~G~iv~~G~  125 (166)
T d1llua2          95 HGVLVTAVSN-----------SA---------------FGQAIGMARRGGTIALVGL  125 (166)
T ss_dssp             EEEEECCSCH-----------HH---------------HHHHHTTEEEEEEEEECCC
T ss_pred             cccccccccc-----------hH---------------HHHHHHHhcCCcEEEEEEe
Confidence            6666555431           11               2234556677889988763

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.99  E-value=0.00071  Score=48.48  Aligned_cols=79  Identities=14%  Similarity=0.215  Sum_probs=51.1

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCe-EEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCC-HHHHHHHHHHHHHHhC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN-GQQRKNLINQTIEKFG   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~~   88 (226)
                      .|.+++|.|+ ||+|...++.+...|++ |+.+++++++++ ..+++   |.+..+   |..+ .+.+++.++..  ..+
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~-~ak~l---Ga~~~i---~~~~~~~~~~~~~~~~--~~~   97 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFA-RAKEF---GATECI---NPQDFSKPIQEVLIEM--TDG   97 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHH-HHHHH---TCSEEE---CGGGCSSCHHHHHHHH--TTS
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHH-HHHHh---CCcEEE---eCCchhhHHHHHHHHH--cCC
Confidence            5889999998 59999999999999975 667777776654 44444   333322   3322 22333333322  124


Q ss_pred             CCCEEEEcCCC
Q 027248           89 KIDVVVSNAAA   99 (226)
Q Consensus        89 ~id~li~nag~   99 (226)
                      .+|++|.+.|.
T Consensus        98 g~D~vid~~G~  108 (176)
T d2fzwa2          98 GVDYSFECIGN  108 (176)
T ss_dssp             CBSEEEECSCC
T ss_pred             CCcEeeecCCC
Confidence            79999999884

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.98  E-value=0.00036  Score=48.97  Aligned_cols=43  Identities=14%  Similarity=0.286  Sum_probs=36.9

Q ss_pred             cccccccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecC
Q 027248            2 EKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRK   45 (226)
Q Consensus         2 ~~~~~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~   45 (226)
                      ..+.+-..++||++||+|| |.+|..-++.|++.|++|.+++-.
T Consensus         3 ~~lpl~~~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1           3 KSLQLAHQLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             CCEEEEECCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             ccchhheeeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            3455667899999999999 569999999999999999888654

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.97  E-value=0.00055  Score=49.01  Aligned_cols=45  Identities=16%  Similarity=0.169  Sum_probs=39.6

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHH
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKL   56 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~   56 (226)
                      ++|.|+|.|+ ||.+++++..|.+.|+ ++.++.|+.++.+.+.+.+
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~   61 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY   61 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhh
Confidence            6789999987 8999999999999997 5999999998888777655

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.96  E-value=0.0011  Score=47.55  Aligned_cols=79  Identities=19%  Similarity=0.247  Sum_probs=53.6

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHH-HHHHHHHHHHHHhC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQ-QRKNLINQTIEKFG   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~v~~~~~~~~~~~~   88 (226)
                      .|.+++|.|+ ||+|...++.+...|+ +|+.+++++++++... ++   +.+..+   |.++.+ .+++.....  ..+
T Consensus        27 ~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~-~l---Ga~~~i---~~~~~d~~~~~~~~~~--~~~   96 (174)
T d1p0fa2          27 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-EL---GATECL---NPKDYDKPIYEVICEK--TNG   96 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HT---TCSEEE---CGGGCSSCHHHHHHHH--TTS
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHH-Hc---CCcEEE---cCCCchhHHHHHHHHh--cCC
Confidence            5889999986 8999999999999997 5889999998875553 22   433332   433322 122222221  224


Q ss_pred             CCCEEEEcCCC
Q 027248           89 KIDVVVSNAAA   99 (226)
Q Consensus        89 ~id~li~nag~   99 (226)
                      .+|++|.+.|.
T Consensus        97 G~d~vid~~g~  107 (174)
T d1p0fa2          97 GVDYAVECAGR  107 (174)
T ss_dssp             CBSEEEECSCC
T ss_pred             CCcEEEEcCCC
Confidence            79999998875

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.94  E-value=0.0018  Score=45.85  Aligned_cols=80  Identities=20%  Similarity=0.169  Sum_probs=53.0

Q ss_pred             EEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHH--------h--cCCcEEEEEeeCCCHHHHHHHHHHHH
Q 027248           15 AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLK--------A--RGIEVIGVVCHVSNGQQRKNLINQTI   84 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~--------~--~~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (226)
                      +.|.|. |-+|.++++.|.+.|++|+..+|+++..+.+.+.-.        +  ...++.++  - ...+.++++++++.
T Consensus         3 I~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIil--a-vp~~~~~~vl~~l~   78 (165)
T d2f1ka2           3 IGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFL--C-TPIQLILPTLEKLI   78 (165)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEE--C-SCHHHHHHHHHHHG
T ss_pred             EEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeecccccccccccc--c-CcHhhhhhhhhhhh
Confidence            566655 999999999999999999999999877766544211        0  02233332  1 23567888888876


Q ss_pred             HHhCCCCEEEEcCC
Q 027248           85 EKFGKIDVVVSNAA   98 (226)
Q Consensus        85 ~~~~~id~li~nag   98 (226)
                      .....=.++++.++
T Consensus        79 ~~l~~~~iv~~~~s   92 (165)
T d2f1ka2          79 PHLSPTAIVTDVAS   92 (165)
T ss_dssp             GGSCTTCEEEECCS
T ss_pred             hhcccccceeeccc
Confidence            65544445555544

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=96.93  E-value=0.01  Score=41.04  Aligned_cols=111  Identities=14%  Similarity=0.115  Sum_probs=65.6

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCCC--eEEEEecCcchHHHHHHHHHhc---CCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248           14 VAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKAR---GIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      .+.|+|+ |.+|.+++..++.+|.  +++++++++++.+.....+...   .....+...+-  .+.           ..
T Consensus         3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~~--~~~-----------~~   68 (143)
T d1llda1           3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDD--PEI-----------CR   68 (143)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESC--GGG-----------GT
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCCC--HHH-----------hh
Confidence            4667786 9999999999999884  6999999998776655555532   22233332221  111           12


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEe
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~s  146 (226)
                      .-|++|..||....  +  ..+..   +.+..|..-.-.+.+.+..+ ..++.++.+|
T Consensus        69 daDvVVitaG~~~~--~--g~~R~---dl~~~N~~i~~~i~~~i~~~-~p~ai~ivvt  118 (143)
T d1llda1          69 DADMVVITAGPRQK--P--GQSRL---ELVGATVNILKAIMPNLVKV-APNAIYMLIT  118 (143)
T ss_dssp             TCSEEEECCCCCCC--T--TCCHH---HHHHHHHHHHHHHHHHHHHH-CTTSEEEECC
T ss_pred             CCcEEEEecccccC--C--CCchh---hhhhhhHHHHHHHHHHHHhh-CCCeEEEEeC
Confidence            67999999997542  1  22332   34556654333333333332 2245555555

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.93  E-value=0.0069  Score=41.72  Aligned_cols=106  Identities=16%  Similarity=0.150  Sum_probs=64.7

Q ss_pred             EEEEcCCCchhHHHHHHHHhCC--CeEEEEecCcchHHHHHHHHHhc---CCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           15 AIVTASTQGIGFGIAERLGLEG--ASVVVSSRKQKNVDEAVVKLKAR---GIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      +.|.|+ |.+|..++..++.++  .++++.++++++++....++...   .........|   .++           ...
T Consensus         3 I~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~---~~~-----------~~~   67 (140)
T d1a5za1           3 IGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD---YAD-----------LKG   67 (140)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC---GGG-----------GTT
T ss_pred             EEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCc---HHH-----------hcC
Confidence            667796 899999999999887  46999999988777655555432   2233333222   221           237


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc---CCEEEEEe
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLIS  146 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~---~~~iv~~s  146 (226)
                      -|++|..||.....+    .+.   .+.+..|.    .+.+...+.+.+   ++.++++|
T Consensus        68 adivvitag~~~~~g----~~r---~dl~~~N~----~I~~~i~~~i~~~~p~aivivvt  116 (140)
T d1a5za1          68 SDVVIVAAGVPQKPG----ETR---LQLLGRNA----RVMKEIARNVSKYAPDSIVIVVT  116 (140)
T ss_dssp             CSEEEECCCCCCCSS----CCH---HHHHHHHH----HHHHHHHHHHHHHCTTCEEEECS
T ss_pred             CCEEEEecccccCCC----cch---hhhhcccc----chHHHHHHHHHhcCCCcEEEEeC
Confidence            899999999764221    222   23344454    344555555433   45566555

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.91  E-value=0.0057  Score=42.71  Aligned_cols=75  Identities=13%  Similarity=0.023  Sum_probs=51.4

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCC-CeEEEEecCcchHHHHHHHHHhc----CCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEG-ASVVVSSRKQKNVDEAVVKLKAR----GIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      ..+.|.|+ |.+|.+++..|...+ .++++.+++++..+....++...    +.+..+...+.  .+           ..
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~~--~~-----------~~   69 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNT--YD-----------DL   69 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECC--GG-----------GG
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEeccc--cc-----------cc
Confidence            35777895 999999998888887 46999999998877665555432    23333333221  11           12


Q ss_pred             CCCCEEEEcCCCCC
Q 027248           88 GKIDVVVSNAAANP  101 (226)
Q Consensus        88 ~~id~li~nag~~~  101 (226)
                      ..-|++|..+|...
T Consensus        70 ~~advvvitag~~~   83 (150)
T d1t2da1          70 AGADVVIVTAGFTK   83 (150)
T ss_dssp             TTCSEEEECCSCSS
T ss_pred             CCCcEEEEeccccc
Confidence            47899999999764

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.90  E-value=0.00072  Score=48.75  Aligned_cols=50  Identities=12%  Similarity=0.304  Sum_probs=43.0

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhc
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR   59 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~   59 (226)
                      .+++||.++|.|+ ||.+++++..|.+.| +|.+..|+.++.+...+.+...
T Consensus        14 ~~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~   63 (177)
T d1nvta1          14 GRVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEK   63 (177)
T ss_dssp             CCCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHh
Confidence            4689999999976 678999999998777 8999999999999888877643

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.90  E-value=0.00087  Score=49.08  Aligned_cols=44  Identities=20%  Similarity=0.276  Sum_probs=38.2

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHH
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLK   57 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~   57 (226)
                      |+|.|.|+ |-+|..+|..++..|++|++.+++++.++...+.+.
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~   48 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIE   48 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHH
Confidence            78999998 779999999999999999999999988776655443

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.77  E-value=0.016  Score=40.07  Aligned_cols=114  Identities=17%  Similarity=0.132  Sum_probs=65.6

Q ss_pred             EEEEcCCCchhHHHHHHHHhC-C--CeEEEEecCcchHHHHHHHHHhcCCcEEEEE-eeCCCHHHHHHHHHHHHHHhCCC
Q 027248           15 AIVTASTQGIGFGIAERLGLE-G--ASVVVSSRKQKNVDEAVVKLKARGIEVIGVV-CHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~-g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      +.|+|++|.+|.+++..|..+ +  .++++.+..+ ..+...-++.........-. ..-.+.+.    +       ..-
T Consensus         3 V~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~~~~~~~~~~~~~~~~~----~-------~~a   70 (145)
T d2cmda1           3 VAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGEDATPA----L-------EGA   70 (145)
T ss_dssp             EEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSCSSCEEEEECSSCCHHH----H-------TTC
T ss_pred             EEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCccccCCcEEEcCCCccc----c-------CCC
Confidence            789999999999999888643 4  6799999864 44444445554322222111 12222221    1       267


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEecc
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~  148 (226)
                      |++|..||....  +  ..+.   .+.+..|..-.-.+.+.+..+- .++.++.+|..
T Consensus        71 DvvvitaG~~~k--~--g~~R---~dl~~~N~~i~~~v~~~i~~~~-p~aivivvtNP  120 (145)
T d2cmda1          71 DVVLISAGVRRK--P--GMDR---SDLFNVNAGIVKNLVQQVAKTC-PKACIGIITNP  120 (145)
T ss_dssp             SEEEECCSCCCC--T--TCCG---GGGHHHHHHHHHHHHHHHHHHC-TTSEEEECSSS
T ss_pred             CEEEECCCccCC--C--Ccch---hhHHHHHHHHHHHHHHHHHhhC-CCcEEEEccCC
Confidence            999999997542  1  1222   3345667554444454444432 34566666644

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.71  E-value=0.0021  Score=45.39  Aligned_cols=99  Identities=18%  Similarity=0.267  Sum_probs=62.7

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      .|.+++|.|+ |++|...+..+...|++|+++++++++++...    +.+.+..   .|-++.+..    +.+.+.....
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k----~~Ga~~~---~~~~~~~~~----~~~~~~~~~~   94 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK----ELGADLV---VNPLKEDAA----KFMKEKVGGV   94 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH----HTTCSEE---ECTTTSCHH----HHHHHHHSSE
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhhh----hcCccee---cccccchhh----hhcccccCCC
Confidence            5789999875 99999998888889999999999988765442    2344432   244443322    2233333456


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEec
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISS  147 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS  147 (226)
                      |.+|.+++..           +               .....+..++++|+++.++-
T Consensus        95 ~~~v~~~~~~-----------~---------------~~~~a~~~l~~~G~i~~~g~  125 (168)
T d1rjwa2          95 HAAVVTAVSK-----------P---------------AFQSAYNSIRRGGACVLVGL  125 (168)
T ss_dssp             EEEEESSCCH-----------H---------------HHHHHHHHEEEEEEEEECCC
T ss_pred             ceEEeecCCH-----------H---------------HHHHHHHHhccCCceEeccc
Confidence            6666666531           1               13445555667788887753

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=96.71  E-value=0.0019  Score=48.67  Aligned_cols=106  Identities=17%  Similarity=0.157  Sum_probs=75.5

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      ...+++||=.|++.|.   ++..|+++|.+|+.++.+++-++.+.+.....+.++.++..|+.+.+.           .+
T Consensus        35 ~~~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d~~~~~~-----------~~  100 (246)
T d1y8ca_          35 NLVFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNI-----------NR  100 (246)
T ss_dssp             TCCTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCC-----------SC
T ss_pred             CCCCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhccccccccCccceeeccchhhhcc-----------cc
Confidence            3567899999998875   788889999999999999998888888777777788888888865431           24


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEE
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVL  144 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~  144 (226)
                      ++|++++..+....     -.+.++...           +++.+..+|+++|.+|+
T Consensus       101 ~fD~i~~~~~~~~~-----~~~~~~~~~-----------~l~~~~~~LkpgG~~i~  140 (246)
T d1y8ca_         101 KFDLITCCLDSTNY-----IIDSDDLKK-----------YFKAVSNHLKEGGVFIF  140 (246)
T ss_dssp             CEEEEEECTTGGGG-----CCSHHHHHH-----------HHHHHHTTEEEEEEEEE
T ss_pred             cccccceeeeeeec-----cCCHHHHHH-----------HHHHHHHhCCCCeEEEE
Confidence            79999875443210     122334333           34566666677776664

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=96.68  E-value=0.0061  Score=43.61  Aligned_cols=125  Identities=14%  Similarity=0.076  Sum_probs=77.4

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhc-------------CCcEEEEEeeCCCHHHH
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-------------GIEVIGVVCHVSNGQQR   76 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~Dv~~~~~v   76 (226)
                      ..|++||..|++.|   ..+..|+++|++|+.++.+++.++.+.+.....             +..+.++.+|..+....
T Consensus        19 ~~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~   95 (201)
T d1pjza_          19 VPGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTAR   95 (201)
T ss_dssp             CTTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHH
T ss_pred             CCCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccccccccc
Confidence            46889999998877   367789999999999999999888887766433             23456777887765431


Q ss_pred             HHHHHHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCC
Q 027248           77 KNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSS  156 (226)
Q Consensus        77 ~~~~~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~  156 (226)
                      ..         ...|.++......       .+..+++..           ..+.+...++++|+++...-... ...+.
T Consensus        96 ~~---------~~~D~i~~~~~l~-------~l~~~~~~~-----------~~~~i~~~LkpgG~l~l~~~~~~-~~~~~  147 (201)
T d1pjza_          96 DI---------GHCAAFYDRAAMI-------ALPADMRER-----------YVQHLEALMPQACSGLLITLEYD-QALLE  147 (201)
T ss_dssp             HH---------HSEEEEEEESCGG-------GSCHHHHHH-----------HHHHHHHHSCSEEEEEEEEESSC-SSSSS
T ss_pred             cc---------cceeEEEEEeeeE-------ecchhhhHH-----------HHHHHHHhcCCCcEEEEEEcccc-cccCC
Confidence            11         2678777654332       133333333           34556666777777655443322 22233


Q ss_pred             CchhhHhHH
Q 027248          157 MAMYGVTKT  165 (226)
Q Consensus       157 ~~~Y~~sKa  165 (226)
                      ...|..++.
T Consensus       148 ~p~~~~~~~  156 (201)
T d1pjza_         148 GPPFSVPQT  156 (201)
T ss_dssp             SCCCCCCHH
T ss_pred             CccccCCHH
Confidence            334555543

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=96.66  E-value=0.0036  Score=45.21  Aligned_cols=38  Identities=32%  Similarity=0.267  Sum_probs=33.9

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcc
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK   47 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~   47 (226)
                      .+.||++.|.|.+ .||+.+++.+...|++|...+|++.
T Consensus        39 ~l~gk~vgIiG~G-~IG~~va~~l~~~g~~v~~~d~~~~   76 (181)
T d1qp8a1          39 LIQGEKVAVLGLG-EIGTRVGKILAALGAQVRGFSRTPK   76 (181)
T ss_dssp             CCTTCEEEEESCS-THHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             cccCceEEEeccc-cccccceeeeecccccccccccccc
Confidence            4789999999865 5999999999999999999999764

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.64  E-value=0.0025  Score=45.75  Aligned_cols=79  Identities=16%  Similarity=0.215  Sum_probs=53.0

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCe-EEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCC-HHHHHHHHHHHHHHhC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN-GQQRKNLINQTIEKFG   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~~   88 (226)
                      .|.+++|.|+ |+||...++.+...|++ |+++++++++++.. +++   +.+..+   |... ++.++...+..  ..+
T Consensus        28 ~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a-~~~---Ga~~~i---~~~~~~~~~~~~~~~~--~~~   97 (174)
T d1e3ia2          28 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKA-KAL---GATDCL---NPRELDKPVQDVITEL--TAG   97 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHT---TCSEEE---CGGGCSSCHHHHHHHH--HTS
T ss_pred             CCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHH-HHh---CCCccc---CCccchhhhhhhHhhh--hcC
Confidence            5789999975 99999999999999985 78889888876333 333   333322   3322 22333333332  235


Q ss_pred             CCCEEEEcCCC
Q 027248           89 KIDVVVSNAAA   99 (226)
Q Consensus        89 ~id~li~nag~   99 (226)
                      .+|++|.+.|.
T Consensus        98 G~d~vie~~G~  108 (174)
T d1e3ia2          98 GVDYSLDCAGT  108 (174)
T ss_dssp             CBSEEEESSCC
T ss_pred             CCcEEEEeccc
Confidence            89999999985

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=96.61  E-value=0.037  Score=43.27  Aligned_cols=118  Identities=19%  Similarity=0.184  Sum_probs=75.6

Q ss_pred             ccCCCEEEEEcCC-CchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCC-cEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248            9 RFQGKVAIVTAST-QGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI-EVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus         9 ~~~gk~vlItGa~-~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      ..+|++||=.++. |+++.+    ++..+.+|+.++.++..++.+.+.+...+. ++.++..|..+      +.+.+.+.
T Consensus       143 ~~~g~rVLDl~~gtG~~s~~----~a~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~------~~~~~~~~  212 (318)
T d1wxxa2         143 RFRGERALDVFSYAGGFALH----LALGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFD------LLRRLEKE  212 (318)
T ss_dssp             GCCEEEEEEETCTTTHHHHH----HHHHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHH------HHHHHHHT
T ss_pred             HhCCCeeeccCCCCcHHHHH----HHhcCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHH------HhhhhHhh
Confidence            4578888877765 555544    344567899999999999888887776664 57777777633      33344445


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEec
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISS  147 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS  147 (226)
                      .+++|++|.++......+.    ....   .    ......+...+..+++++|.+++.|-
T Consensus       213 ~~~fD~Vi~DpP~~~~~~~----~~~~---~----~~~~~~l~~~a~~lLkpGG~Lv~~sc  262 (318)
T d1wxxa2         213 GERFDLVVLDPPAFAKGKK----DVER---A----YRAYKEVNLRAIKLLKEGGILATASC  262 (318)
T ss_dssp             TCCEEEEEECCCCSCCSTT----SHHH---H----HHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             hcCCCEEEEcCCccccchH----HHHH---H----HHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence            5689999999865432111    1111   1    11223566777777888887666543

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.59  E-value=0.0068  Score=44.46  Aligned_cols=104  Identities=14%  Similarity=0.043  Sum_probs=72.6

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      ++.+||=.|++.|.   ++..|++.|++|+.++.+++.++.+.+.....+..+..+..|..+...          ..+..
T Consensus        37 ~~~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~~l~~----------~~~~f  103 (226)
T d1ve3a1          37 KRGKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSF----------EDKTF  103 (226)
T ss_dssp             SCCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCS----------CTTCE
T ss_pred             CCCEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhccccccccccccccccccc----------cCcCc
Confidence            34578999998876   667888899999999999998888888777777777777788766431          11489


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEE
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLI  145 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~  145 (226)
                      |+++++..+..       .+.+++.+.           ++.+...|+++|++++.
T Consensus       104 D~I~~~~~l~~-------~~~~d~~~~-----------l~~i~~~LkpgG~lii~  140 (226)
T d1ve3a1         104 DYVIFIDSIVH-------FEPLELNQV-----------FKEVRRVLKPSGKFIMY  140 (226)
T ss_dssp             EEEEEESCGGG-------CCHHHHHHH-----------HHHHHHHEEEEEEEEEE
T ss_pred             eEEEEecchhh-------CChhHHHHH-----------HHHHHHHcCcCcEEEEE
Confidence            99987754422       233333333           44556666778876543

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.53  E-value=0.021  Score=39.26  Aligned_cols=107  Identities=11%  Similarity=0.039  Sum_probs=64.1

Q ss_pred             EEEEcCCCchhHHHHHHHHhCC--CeEEEEecCcchHHHHHHHHHhc----CCcEEEEEe-eCCCHHHHHHHHHHHHHHh
Q 027248           15 AIVTASTQGIGFGIAERLGLEG--ASVVVSSRKQKNVDEAVVKLKAR----GIEVIGVVC-HVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~-Dv~~~~~v~~~~~~~~~~~   87 (226)
                      +.|+|+ |.+|.+++..++.+|  .++++++++++..+....++.+.    .....+... |.   +.           .
T Consensus         3 I~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~---~~-----------~   67 (142)
T d1ojua1           3 LGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADY---SL-----------L   67 (142)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCG---GG-----------G
T ss_pred             EEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCH---HH-----------h
Confidence            667786 999999999999888  35999999988876655555432    222233322 32   11           2


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhc---CCEEEEEec
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISS  147 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~---~~~iv~~sS  147 (226)
                      ..-|++|..||.....+    .+.   .+.+..|..    +.+...+.+++   ++.++.+|-
T Consensus        68 ~~adiVvitag~~~~~g----~~r---~~l~~~n~~----i~~~i~~~i~~~~p~aivivvtN  119 (142)
T d1ojua1          68 KGSEIIVVTAGLARKPG----MTR---LDLAHKNAG----IIKDIAKKIVENAPESKILVVTN  119 (142)
T ss_dssp             TTCSEEEECCCCCCCSS----CCH---HHHHHHHHH----HHHHHHHHHHTTSTTCEEEECSS
T ss_pred             ccccEEEEeccccCCCC----Cch---HHHHHHhhH----HHHHHHHHHHhhCCCcEEEEecC
Confidence            47899999999754221    222   334445543    34444444433   355555553

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.44  E-value=0.015  Score=40.52  Aligned_cols=77  Identities=14%  Similarity=0.185  Sum_probs=44.7

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCCC-------eEEEEecCcch--HHHHHHHHHhc-CCcEEEEEeeCCCHHHHHHHHHHH
Q 027248           14 VAIVTASTQGIGFGIAERLGLEGA-------SVVVSSRKQKN--VDEAVVKLKAR-GIEVIGVVCHVSNGQQRKNLINQT   83 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g~-------~v~~~~r~~~~--~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~   83 (226)
                      .|.|+||+|.+|.+++..|+..+.       .+++.+.++..  ++...-++... ......+  ..++...        
T Consensus         5 KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~--------   74 (154)
T d5mdha1           5 RVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDV--IATDKEE--------   74 (154)
T ss_dssp             EEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEE--EEESCHH--------
T ss_pred             EEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhccccccccccc--ccCcccc--------
Confidence            589999999999999999986542       35555554432  22222222222 1222222  2221111        


Q ss_pred             HHHhCCCCEEEEcCCCCC
Q 027248           84 IEKFGKIDVVVSNAAANP  101 (226)
Q Consensus        84 ~~~~~~id~li~nag~~~  101 (226)
                       +.+...|++|..+|...
T Consensus        75 -~~~~~~dvVVitag~~~   91 (154)
T d5mdha1          75 -IAFKDLDVAILVGSMPR   91 (154)
T ss_dssp             -HHTTTCSEEEECCSCCC
T ss_pred             -cccCCceEEEEecccCC
Confidence             12348999999999764

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.43  E-value=0.0065  Score=45.53  Aligned_cols=103  Identities=19%  Similarity=0.093  Sum_probs=71.6

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      .+++||=.|++.|   .++..|+++|++|+.++.++.-++.+.+...+.+.++.++..|+.+.+.           -+..
T Consensus        41 ~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~~~l~~-----------~~~f  106 (251)
T d1wzna1          41 EVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAF-----------KNEF  106 (251)
T ss_dssp             CCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCC-----------CSCE
T ss_pred             CCCEEEEeCCCCC---ccchhhcccceEEEEEeeccccccccccccccccccchheehhhhhccc-----------cccc
Confidence            4678999998876   4566788999999999999988888888887777788899999866431           1478


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEE
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVL  144 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~  144 (226)
                      |++++.-+...      -.+.++..+.           ++.+...|+++|.+++
T Consensus       107 D~I~~~~~~~~------~~~~~~~~~~-----------L~~~~~~LkpgG~lii  143 (251)
T d1wzna1         107 DAVTMFFSTIM------YFDEEDLRKL-----------FSKVAEALKPGGVFIT  143 (251)
T ss_dssp             EEEEECSSGGG------GSCHHHHHHH-----------HHHHHHHEEEEEEEEE
T ss_pred             chHhhhhhhhh------cCChHHHHHH-----------HHHHHHHcCCCcEEEE
Confidence            98887543221      1223333333           4455556666776654

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.42  E-value=0.0093  Score=40.38  Aligned_cols=72  Identities=14%  Similarity=0.141  Sum_probs=53.7

Q ss_pred             EEEEcCCCchhHHHHHHHHhCCCeEE-EEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCEE
Q 027248           15 AIVTASTQGIGFGIAERLGLEGASVV-VSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVV   93 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g~~v~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~l   93 (226)
                      +.|.|++|-.|+++++.+.++|++++ .++++....      +  ...++   ..|++.++...+.++...+.  ++-++
T Consensus         3 i~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~~------~--~~~DV---vIDFS~p~~~~~~l~~~~~~--~~p~V   69 (128)
T d1vm6a3           3 YGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVEE------L--DSPDV---VIDFSSPEALPKTVDLCKKY--RAGLV   69 (128)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEEE------C--SCCSE---EEECSCGGGHHHHHHHHHHH--TCEEE
T ss_pred             EEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHHH------h--ccCCE---EEEecCHHHHHHHHHHHHhc--CCCEE
Confidence            88999999999999999999999865 445543211      0  12343   45999999999999988776  56678


Q ss_pred             EEcCCC
Q 027248           94 VSNAAA   99 (226)
Q Consensus        94 i~nag~   99 (226)
                      +-..|.
T Consensus        70 iGTTG~   75 (128)
T d1vm6a3          70 LGTTAL   75 (128)
T ss_dssp             ECCCSC
T ss_pred             EEcCCC
Confidence            766664

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=96.38  E-value=0.0027  Score=46.66  Aligned_cols=44  Identities=20%  Similarity=0.314  Sum_probs=38.3

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHH
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEA   52 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~   52 (226)
                      .+++||+++|-| -|.+|..+++.|.+.|++|++.+.+.+.+...
T Consensus        23 ~~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~   66 (201)
T d1c1da1          23 GSLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHA   66 (201)
T ss_dssp             CCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHH
Confidence            468999999997 77899999999999999999999887765543

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=96.34  E-value=0.005  Score=43.62  Aligned_cols=46  Identities=24%  Similarity=0.260  Sum_probs=39.9

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEA   52 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~   52 (226)
                      ..+++||+++|.|.+.-+|+.++..|.++|+.|.++.+....+...
T Consensus        32 ~i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l~~~   77 (166)
T d1b0aa1          32 NIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHH   77 (166)
T ss_dssp             TCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHHH
T ss_pred             CcccccceEEEEeccccccHHHHHHHHHhhccccccccccchhHHH
Confidence            3468999999999999999999999999999999888877665443

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.33  E-value=0.007  Score=43.69  Aligned_cols=40  Identities=28%  Similarity=0.218  Sum_probs=34.7

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcch
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN   48 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~   48 (226)
                      ..+.||++.|.| .|.||+++++.+...|++|+..++...+
T Consensus        40 ~~l~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~   79 (184)
T d1ygya1          40 TEIFGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSP   79 (184)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCH
T ss_pred             ccccceeeeecc-ccchhHHHHHHhhhccceEEeecCCCCh
Confidence            347899999887 6899999999999999999999987654

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=96.32  E-value=0.0044  Score=45.21  Aligned_cols=40  Identities=18%  Similarity=0.194  Sum_probs=35.0

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcch
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN   48 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~   48 (226)
                      ..+.||++.|.| -|.||+++++.+...|++|+..++....
T Consensus        45 ~eL~gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~   84 (193)
T d1mx3a1          45 ARIRGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLSD   84 (193)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCT
T ss_pred             eeeeCceEEEec-cccccccceeeeeccccceeeccCcccc
Confidence            458899999996 5799999999999999999999987654

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=96.32  E-value=0.0076  Score=45.84  Aligned_cols=74  Identities=16%  Similarity=0.189  Sum_probs=56.0

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      ...|++|+=.|+++|+   ++..+++.|++|+.++.++..++.+.+.....+.+..++..|+.+      .+     ..+
T Consensus       118 ~~~g~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~~A~~na~~n~~~~~~~~~d~~~------~~-----~~~  183 (254)
T d2nxca1         118 LRPGDKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEA------AL-----PFG  183 (254)
T ss_dssp             CCTTCEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHH------HG-----GGC
T ss_pred             cCccCEEEEcccchhH---HHHHHHhcCCEEEEEECChHHHHHHHHHHHHcCCceeEEeccccc------cc-----ccc
Confidence            4578999999998886   334567789999999999999998888777777777777666421      11     236


Q ss_pred             CCCEEEEc
Q 027248           89 KIDVVVSN   96 (226)
Q Consensus        89 ~id~li~n   96 (226)
                      +.|+++.|
T Consensus       184 ~fD~V~an  191 (254)
T d2nxca1         184 PFDLLVAN  191 (254)
T ss_dssp             CEEEEEEE
T ss_pred             ccchhhhc
Confidence            89999977

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=96.24  E-value=0.0022  Score=46.55  Aligned_cols=43  Identities=19%  Similarity=0.315  Sum_probs=37.1

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHH
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKL   56 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~   56 (226)
                      |++.|.|+ |-+|..++..++..|++|++.+++++.++...+.+
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i   47 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEA   47 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhh
Confidence            56888988 77999999999999999999999998877665544

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.21  E-value=0.017  Score=42.10  Aligned_cols=78  Identities=21%  Similarity=0.221  Sum_probs=59.9

Q ss_pred             cccccCCCEEEEEcCCCc-hhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHH
Q 027248            6 MAKRFQGKVAIVTASTQG-IGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQT   83 (226)
Q Consensus         6 ~~~~~~gk~vlItGa~~g-iG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   83 (226)
                      ...+++|++|+=.|++.| +|.    .++..|+ +|+.++.+++.++.+.+.+...+.+..++..|+...          
T Consensus        41 ~~~dl~g~~vLDlg~GtG~l~i----~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~~~~~~~~~~d~~~~----------  106 (201)
T d1wy7a1          41 SLGDIEGKVVADLGAGTGVLSY----GALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEF----------  106 (201)
T ss_dssp             HTTSSTTCEEEEETCTTCHHHH----HHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGC----------
T ss_pred             hcCCCCCCEEEECcCcchHHHH----HHHHcCCCEEEEEcCcHHHHHHHHHHHHHcCCCceEEECchhhh----------
Confidence            345689999999998765 443    3456775 799999999988888777777777888888887443          


Q ss_pred             HHHhCCCCEEEEcCCCC
Q 027248           84 IEKFGKIDVVVSNAAAN  100 (226)
Q Consensus        84 ~~~~~~id~li~nag~~  100 (226)
                         .+++|++|.|+-+.
T Consensus       107 ---~~~fD~Vi~nPP~~  120 (201)
T d1wy7a1         107 ---NSRVDIVIMNPPFG  120 (201)
T ss_dssp             ---CCCCSEEEECCCCS
T ss_pred             ---CCcCcEEEEcCccc
Confidence               35899999999764

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=96.19  E-value=0.0088  Score=42.42  Aligned_cols=79  Identities=11%  Similarity=0.183  Sum_probs=51.2

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHH-HHHHHHHHHHHhC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQ-RKNLINQTIEKFG   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-v~~~~~~~~~~~~   88 (226)
                      .|.+++|.|+ ||+|...+.++...|. +|+.+++++++++...    +.|.+..+   |..+++. +++..+..  ..+
T Consensus        28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~----~~GAd~~i---n~~~~~~~~~~~~~~~--~~~   97 (175)
T d1cdoa2          28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK----VFGATDFV---NPNDHSEPISQVLSKM--TNG   97 (175)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH----HTTCCEEE---CGGGCSSCHHHHHHHH--HTS
T ss_pred             CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHH----HcCCcEEE---cCCCcchhHHHHHHhh--ccC
Confidence            5789999985 7788888888888886 5888999888875543    23433322   4333322 22222222  124


Q ss_pred             CCCEEEEcCCC
Q 027248           89 KIDVVVSNAAA   99 (226)
Q Consensus        89 ~id~li~nag~   99 (226)
                      .+|+++.+.|.
T Consensus        98 G~d~vid~~G~  108 (175)
T d1cdoa2          98 GVDFSLECVGN  108 (175)
T ss_dssp             CBSEEEECSCC
T ss_pred             CcceeeeecCC
Confidence            79999999985

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.19  E-value=0.0072  Score=42.46  Aligned_cols=82  Identities=17%  Similarity=0.149  Sum_probs=54.1

Q ss_pred             EEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHh-------cCCcEEEEEeeCCCHHHHHHHH---HHHH
Q 027248           15 AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA-------RGIEVIGVVCHVSNGQQRKNLI---NQTI   84 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~Dv~~~~~v~~~~---~~~~   84 (226)
                      |-|.| .|-+|.++++.|++.|++|++.+|++++.+.+.+....       ...++.++..=+.+++.++.++   +.+.
T Consensus         3 IgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii~~v~~~~~v~~v~~~~~~~~   81 (161)
T d1vpda2           3 VGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGII   81 (161)
T ss_dssp             EEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHH
T ss_pred             EEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhcccHHHHHhCCCeEEEEcCCHHHHHHHHhCCcchh
Confidence            45554 58999999999999999999999999887765542100       0012334455677888888876   3344


Q ss_pred             HHhCCCCEEEEcC
Q 027248           85 EKFGKIDVVVSNA   97 (226)
Q Consensus        85 ~~~~~id~li~na   97 (226)
                      ....+=+++|...
T Consensus        82 ~~~~~g~iiid~s   94 (161)
T d1vpda2          82 EGAKPGTVLIDMS   94 (161)
T ss_dssp             HHCCTTCEEEECS
T ss_pred             hccCCCCEEEECC
Confidence            4443445566544

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=96.17  E-value=0.0066  Score=44.35  Aligned_cols=40  Identities=20%  Similarity=0.145  Sum_probs=34.6

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcch
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN   48 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~   48 (226)
                      ..+.||++.|.| -|.||+.+++.+...|++|+..++....
T Consensus        39 ~el~gk~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~~~   78 (197)
T d1j4aa1          39 REVRDQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRNP   78 (197)
T ss_dssp             CCGGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCH
T ss_pred             ccccCCeEEEec-ccccchhHHHhHhhhcccccccCccccc
Confidence            357899999997 5799999999999999999998877543

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=96.11  E-value=0.039  Score=38.86  Aligned_cols=106  Identities=13%  Similarity=0.126  Sum_probs=75.8

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      +.-+++|.|+ |-.|++-++.....|++|.+.+.+.+++++....+...   +   ..-..+++.+++.+.       .-
T Consensus        31 ~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~---~---~~~~~~~~~l~~~~~-------~a   96 (168)
T d1pjca1          31 KPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSR---V---ELLYSNSAEIETAVA-------EA   96 (168)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGG---S---EEEECCHHHHHHHHH-------TC
T ss_pred             CCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhccc---c---eeehhhhhhHHHhhc-------cC
Confidence            4567888875 56788999999999999999999999988877666432   2   234566666655554       78


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCC
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG  150 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~  150 (226)
                      |++|..+-+... +...-                   +.+..+..|+++.-||-++...+
T Consensus        97 DivI~aalipG~-~aP~l-------------------It~~mv~~Mk~GSVIVDvaidqG  136 (168)
T d1pjca1          97 DLLIGAVLVPGR-RAPIL-------------------VPASLVEQMRTGSVIVDVAVDQG  136 (168)
T ss_dssp             SEEEECCCCTTS-SCCCC-------------------BCHHHHTTSCTTCEEEETTCTTC
T ss_pred             cEEEEeeecCCc-ccCee-------------------ecHHHHhhcCCCcEEEEeecCCC
Confidence            999999877652 32222                   34455667788888888877654

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.10  E-value=0.0053  Score=43.73  Aligned_cols=45  Identities=22%  Similarity=0.320  Sum_probs=40.0

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDE   51 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~   51 (226)
                      ..+++||.++|.|.|.-+|+.++..|+++|+.|.++.+....+.+
T Consensus        34 ~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~~   78 (170)
T d1a4ia1          34 GVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDE   78 (170)
T ss_dssp             TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHH
T ss_pred             CcccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHHH
Confidence            356899999999999999999999999999999999987766543

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=96.09  E-value=0.13  Score=39.93  Aligned_cols=115  Identities=12%  Similarity=0.112  Sum_probs=70.8

Q ss_pred             CCCEEEEEcC-CCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhcC---CcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248           11 QGKVAIVTAS-TQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARG---IEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus        11 ~gk~vlItGa-~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      +|++||=..+ +|+++.+    .+..|+ +|+.++.++..++...+.+...+   .++.++..|+      -+.++...+
T Consensus       144 ~g~~VLdlf~~~G~~sl~----aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~------~~~l~~~~~  213 (317)
T d2b78a2         144 AGKTVLNLFSYTAAFSVA----AAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDV------FDYFKYARR  213 (317)
T ss_dssp             BTCEEEEETCTTTHHHHH----HHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCH------HHHHHHHHH
T ss_pred             CCCceeecCCCCcHHHHH----HHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccH------HHHHHHHHh
Confidence            5888875554 5666544    345676 59999999999888877776553   3577887776      334555555


Q ss_pred             HhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEe
Q 027248           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~s  146 (226)
                      +..++|++|..+-.....+. ...+.          ......+.+.++++++++|.+++.|
T Consensus       214 ~~~~fD~Ii~DPP~f~~~~~-~~~~~----------~~~~~~L~~~a~~ll~pgG~l~~~s  263 (317)
T d2b78a2         214 HHLTYDIIIIDPPSFARNKK-EVFSV----------SKDYHKLIRQGLEILSENGLIIAST  263 (317)
T ss_dssp             TTCCEEEEEECCCCC------CCCCH----------HHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             hcCCCCEEEEcChhhccchh-HHHHH----------HHHHHHHHHHHHHHcCCCCEEEEEe
Confidence            56689999998764432111 00110          1122345677778887777665544

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.06  E-value=0.026  Score=38.39  Aligned_cols=76  Identities=12%  Similarity=0.112  Sum_probs=53.0

Q ss_pred             EEEEEcCCCchhHHHHHHHHhC-CCeEE-EEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCC
Q 027248           14 VAIVTASTQGIGFGIAERLGLE-GASVV-VSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~-g~~v~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id   91 (226)
                      ++.|.|++|-.|+++++...+. +++++ .+++.. .+.    .+.....++.   .|++.++.+...++...+.  .+-
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~-~~~----~~~~~~~Dvv---IDFS~p~~~~~~~~~~~~~--~~~   70 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGD-PLS----LLTDGNTEVV---IDFTHPDVVMGNLEFLIDN--GIH   70 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTC-CTH----HHHTTTCSEE---EECCCTTTHHHHHHHHHHT--TCE
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCC-chh----hhccccCCEE---EEcccHHHHHHHHHHHHhc--CCC
Confidence            4789999999999999988765 57754 444433 222    2222344443   5999999999998888775  666


Q ss_pred             EEEEcCCC
Q 027248           92 VVVSNAAA   99 (226)
Q Consensus        92 ~li~nag~   99 (226)
                      +++-..|+
T Consensus        71 ~ViGTTG~   78 (135)
T d1yl7a1          71 AVVGTTGF   78 (135)
T ss_dssp             EEECCCCC
T ss_pred             EEEecccc
Confidence            77755554

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=95.97  E-value=0.035  Score=38.91  Aligned_cols=83  Identities=10%  Similarity=0.037  Sum_probs=54.5

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCC--eEEEEecCcchHHHHHHHHHh------------cCCcEEEEEeeCCCHHHHHH
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKA------------RGIEVIGVVCHVSNGQQRKN   78 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~------------~~~~~~~~~~Dv~~~~~v~~   78 (226)
                      |+++|.|. |-+|.++++.|.+.|+  +|+..+++++.++.+.+.-.-            ...++.++   -+.++.+.+
T Consensus         2 k~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIil---a~p~~~~~~   77 (171)
T d2g5ca2           2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVML---SSPVRTFRE   77 (171)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEE---CSCHHHHHH
T ss_pred             CEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhccccccccc---cCCchhhhh
Confidence            46888875 8999999999999996  588889988777665543110            01122221   233566788


Q ss_pred             HHHHHHHHhCCCCEEEEcCCC
Q 027248           79 LINQTIEKFGKIDVVVSNAAA   99 (226)
Q Consensus        79 ~~~~~~~~~~~id~li~nag~   99 (226)
                      +++++......=.+++..+++
T Consensus        78 vl~~l~~~~~~~~ii~d~~s~   98 (171)
T d2g5ca2          78 IAKKLSYILSEDATVTDQGSV   98 (171)
T ss_dssp             HHHHHHHHSCTTCEEEECCSC
T ss_pred             hhhhhhccccccccccccccc
Confidence            888877765544566655554

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=95.96  E-value=0.012  Score=42.49  Aligned_cols=41  Identities=17%  Similarity=0.167  Sum_probs=35.3

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcch
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN   48 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~   48 (226)
                      ...+.|+++.|.| .|.||+++++.|...|++|...++....
T Consensus        39 ~~~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~   79 (188)
T d2naca1          39 AYDLEAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRLP   79 (188)
T ss_dssp             CCCCTTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCC
T ss_pred             ceeccccceeecc-ccccchhhhhhhhccCceEEEEeecccc
Confidence            3467899999987 5789999999999999999999987644

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.95  E-value=0.043  Score=43.00  Aligned_cols=117  Identities=16%  Similarity=0.171  Sum_probs=74.9

Q ss_pred             CCCEEEEEcCC-CchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhcCC--cEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248           11 QGKVAIVTAST-QGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGI--EVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus        11 ~gk~vlItGa~-~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      .|++||=.++. |+++.++    +..|+ +|+.++.+++.++.+.+.+...+.  ++.++..|+.      +....+...
T Consensus       145 ~g~~VLDl~~g~G~~si~~----a~~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~------~~~~~~~~~  214 (324)
T d2as0a2         145 PGDRVLDVFTYTGGFAIHA----AIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAF------EEMEKLQKK  214 (324)
T ss_dssp             TTCEEEETTCTTTHHHHHH----HHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHH------HHHHHHHHT
T ss_pred             CCCeeecccCcccchhhhh----hhcCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhh------hhhHHHHhc
Confidence            37888877764 5555544    35575 699999999998888777766654  4667766653      234444455


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEecc
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~  148 (226)
                      ..++|++|.++......+       .+....    ......+...+.+.++++|.+++.|..
T Consensus       215 ~~~fD~Vi~DpP~~~~~~-------~~~~~~----~~~y~~l~~~a~~ll~pGG~lv~~s~s  265 (324)
T d2as0a2         215 GEKFDIVVLDPPAFVQHE-------KDLKAG----LRAYFNVNFAGLNLVKDGGILVTCSCS  265 (324)
T ss_dssp             TCCEEEEEECCCCSCSSG-------GGHHHH----HHHHHHHHHHHHTTEEEEEEEEEEECC
T ss_pred             cCCCCchhcCCccccCCH-------HHHHHH----HHHHHHHHHHHHHHcCCCcEEEEEeCC
Confidence            568999999887543211       111111    122345667788888888877766533

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=95.94  E-value=0.02  Score=43.04  Aligned_cols=81  Identities=15%  Similarity=0.210  Sum_probs=55.1

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecC-------------------cchHHHHHHHHHhcCCcEEEEEe
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRK-------------------QKNVDEAVVKLKARGIEVIGVVC   68 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~-------------------~~~~~~~~~~~~~~~~~~~~~~~   68 (226)
                      .+++++|+|.| .||+|..+++.|++.|. ++.++|.+                   ..+.+.+.+.+.+..+.+.+...
T Consensus        27 kL~~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~  105 (247)
T d1jw9b_          27 ALKDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPV  105 (247)
T ss_dssp             HHHHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhh
Confidence            36778999999 67899999999999997 58898866                   23555666667766666655555


Q ss_pred             eCC-CHHHHHHHHHHHHHHhCCCCEEEEcC
Q 027248           69 HVS-NGQQRKNLINQTIEKFGKIDVVVSNA   97 (226)
Q Consensus        69 Dv~-~~~~v~~~~~~~~~~~~~id~li~na   97 (226)
                      +.. +.+......       ...|++|...
T Consensus       106 ~~~~~~~~~~~~~-------~~~divid~~  128 (247)
T d1jw9b_         106 NALLDDAELAALI-------AEHDLVLDCT  128 (247)
T ss_dssp             CSCCCHHHHHHHH-------HTSSEEEECC
T ss_pred             hhhhhhccccccc-------cccceeeecc
Confidence            543 223322222       2678887543

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.90  E-value=0.011  Score=43.85  Aligned_cols=127  Identities=12%  Similarity=0.042  Sum_probs=75.6

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhc------------------CCcEEEEEeeCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR------------------GIEVIGVVCHVSN   72 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~------------------~~~~~~~~~Dv~~   72 (226)
                      .|++||..|++.|   ..+..|+++|++|+.++-+++.++.+.++....                  +.++.++.+|+.+
T Consensus        45 ~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~  121 (229)
T d2bzga1          45 SGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCCSIFD  121 (229)
T ss_dssp             CSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCGGG
T ss_pred             CCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEcchhh
Confidence            6789999998876   458888999999999999998887766654321                  3356777777754


Q ss_pred             HHHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcC
Q 027248           73 GQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ  152 (226)
Q Consensus        73 ~~~v~~~~~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~  152 (226)
                      ....         ..+..|+++.......       ...++....           .+.+...++++|+++.++-.....
T Consensus       122 l~~~---------~~~~fd~i~~~~~l~~-------~~~~~r~~~-----------~~~~~~~LkpgG~~~l~~~~~~~~  174 (229)
T d2bzga1         122 LPRT---------NIGKFDMIWDRGALVA-------INPGDRKCY-----------ADTMFSLLGKKFQYLLCVLSYDPT  174 (229)
T ss_dssp             GGGS---------CCCCEEEEEESSSTTT-------SCGGGHHHH-----------HHHHHHTEEEEEEEEEEEEECCTT
T ss_pred             cccc---------ccCceeEEEEEEEEEe-------ccchhhHHH-----------HHHHHhhcCCcceEEEEEcccCCC
Confidence            4320         1136777765554432       222222222           344555667778765554333221


Q ss_pred             CCCCCchhhHhHHHHH
Q 027248          153 PQSSMAMYGVTKTALL  168 (226)
Q Consensus       153 ~~~~~~~Y~~sKaa~~  168 (226)
                      . ...+.|..++.-+.
T Consensus       175 ~-~~gpp~~~~~~el~  189 (229)
T d2bzga1         175 K-HPGPPFYVPHAEIE  189 (229)
T ss_dssp             T-CCCSSCCCCHHHHH
T ss_pred             C-CCCCCCCCCHHHHH
Confidence            1 22234666665333

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=95.88  E-value=0.0087  Score=43.52  Aligned_cols=81  Identities=15%  Similarity=0.084  Sum_probs=59.9

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCEE
Q 027248           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVV   93 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~l   93 (226)
                      ++=+|-|+||.-.++.+.+ . +.+|+.++++++.++...+.+...+.++.++..++.+...+   +...  ..+.+|.+
T Consensus        27 ~lD~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~~~~~~---~~~~--~~~~vdgI   99 (192)
T d1m6ya2          27 ILDCTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFL---LKTL--GIEKVDGI   99 (192)
T ss_dssp             EEETTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHH---HHHT--TCSCEEEE
T ss_pred             EEEecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhccccccccchhHHHhhHHHH---HHHc--CCCCccee
Confidence            3335667777777887776 3 46899999999999888888877777899999988775442   2211  13589999


Q ss_pred             EEcCCCCC
Q 027248           94 VSNAAANP  101 (226)
Q Consensus        94 i~nag~~~  101 (226)
                      +...|+..
T Consensus       100 l~DlGvSs  107 (192)
T d1m6ya2         100 LMDLGVST  107 (192)
T ss_dssp             EEECSCCH
T ss_pred             eeccchhH
Confidence            99999853

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=95.86  E-value=0.005  Score=43.16  Aligned_cols=34  Identities=18%  Similarity=0.028  Sum_probs=31.0

Q ss_pred             EEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchH
Q 027248           15 AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNV   49 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~   49 (226)
                      |+|.|+ |.+|..++..|++.|++|.+++|+++..
T Consensus         3 I~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~   36 (167)
T d1ks9a2           3 ITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPY   36 (167)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSE
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHh
Confidence            788888 9999999999999999999999998654

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.85  E-value=0.0042  Score=50.99  Aligned_cols=35  Identities=20%  Similarity=0.347  Sum_probs=29.9

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecC
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRK   45 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~   45 (226)
                      +++.+|+|.|+ ||+|.++++.|+..|. ++.+++.+
T Consensus        35 l~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D   70 (426)
T d1yovb1          35 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMD   70 (426)
T ss_dssp             HHHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCC
T ss_pred             HhcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECC
Confidence            34567999998 6799999999999997 59998886

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=95.72  E-value=0.021  Score=41.32  Aligned_cols=41  Identities=12%  Similarity=0.090  Sum_probs=34.7

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchH
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNV   49 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~   49 (226)
                      ..+.||++.|.| -|.||+++++.+...|++|+..++.....
T Consensus        43 ~~l~g~tvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~   83 (191)
T d1gdha1          43 EKLDNKTLGIYG-FGSIGQALAKRAQGFDMDIDYFDTHRASS   83 (191)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSCCCH
T ss_pred             ceecccceEEee-cccchHHHHHHHHhhcccccccccccccc
Confidence            356799999987 57999999999999999999998876543

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=95.72  E-value=0.0057  Score=41.30  Aligned_cols=70  Identities=10%  Similarity=0.060  Sum_probs=49.5

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCE
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~   92 (226)
                      |.++|.|. |.+|+.+++.|.  |.++++++.+++..+...    ..  .+.++.+|.++++..+++      ...+.+.
T Consensus         1 kHivI~G~-g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~----~~--~~~~i~Gd~~~~~~L~~a------~i~~A~~   65 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLRELR--GSEVFVLAEDENVRKKVL----RS--GANFVHGDPTRVSDLEKA------NVRGARA   65 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTSC--GGGEEEEESCTTHHHHHH----HT--TCEEEESCTTSHHHHHHT------TCTTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHc--CCCCEEEEcchHHHHHHH----hc--CccccccccCCHHHHHHh------hhhcCcE
Confidence            56888875 789999999994  556888888887765442    22  356788999999876553      1236677


Q ss_pred             EEEcC
Q 027248           93 VVSNA   97 (226)
Q Consensus        93 li~na   97 (226)
                      +|...
T Consensus        66 vi~~~   70 (129)
T d2fy8a1          66 VIVNL   70 (129)
T ss_dssp             EEECC
T ss_pred             EEEec
Confidence            77433

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=95.71  E-value=0.016  Score=38.13  Aligned_cols=72  Identities=15%  Similarity=0.166  Sum_probs=54.2

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      ...+.++.|.| +|-+|+-++....+.|+++++.+.+++......        .-.++..|..|.+.+.++...-     
T Consensus         8 ~~~~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~PA~~v--------a~~~i~~~~~d~~~l~~~~~~~-----   73 (111)
T d1kjqa2           8 RPAATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADAPAMHV--------AHRSHVINMLDGDALRRVVELE-----   73 (111)
T ss_dssp             STTCCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTCGGGGG--------SSEEEECCTTCHHHHHHHHHHH-----
T ss_pred             CCCCCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCCchhhc--------CCeEEECCCCCHHHHHHHHHhh-----
Confidence            34456799998 678999999999999999999999876432111        1246778999999988876642     


Q ss_pred             CCCEEE
Q 027248           89 KIDVVV   94 (226)
Q Consensus        89 ~id~li   94 (226)
                      .+|++-
T Consensus        74 ~~DviT   79 (111)
T d1kjqa2          74 KPHYIV   79 (111)
T ss_dssp             CCSEEE
T ss_pred             CCceEE
Confidence            788884

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=95.69  E-value=0.04  Score=38.98  Aligned_cols=78  Identities=19%  Similarity=0.186  Sum_probs=53.0

Q ss_pred             CCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcC------------------CcEEEEEeeCCCHHHHHHHHH
Q 027248           20 STQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG------------------IEVIGVVCHVSNGQQRKNLIN   81 (226)
Q Consensus        20 a~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~------------------~~~~~~~~Dv~~~~~v~~~~~   81 (226)
                      |.|-+|.++++.|++.|++|.+.+|++++.+.+.++.....                  .....+..-+.....+...+.
T Consensus         8 GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (178)
T d1pgja2           8 GLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAATDSTIE   87 (178)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHHHHHHHH
T ss_pred             eehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHHhcccceEEEEeecCcchhhhhhh
Confidence            57899999999999999999999999998887776543211                  111233344555566666666


Q ss_pred             HHHHHhCCCCEEEEcC
Q 027248           82 QTIEKFGKIDVVVSNA   97 (226)
Q Consensus        82 ~~~~~~~~id~li~na   97 (226)
                      .+...+..=+++|+..
T Consensus        88 ~~~~~~~~~~iii~~s  103 (178)
T d1pgja2          88 QLKKVFEKGDILVDTG  103 (178)
T ss_dssp             HHHHHCCTTCEEEECC
T ss_pred             hhhhhccccceecccC
Confidence            6666554555665543

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=95.48  E-value=0.0055  Score=44.48  Aligned_cols=41  Identities=22%  Similarity=0.154  Sum_probs=33.5

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHH
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVV   54 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~   54 (226)
                      +.|.|.|+ |..|.+++..|++.|++|.+.+|+++..+...+
T Consensus         8 ~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~   48 (189)
T d1n1ea2           8 NKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVNE   48 (189)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHH
T ss_pred             ceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhh
Confidence            34778875 569999999999999999999999877665543

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.48  E-value=0.059  Score=37.54  Aligned_cols=84  Identities=15%  Similarity=0.046  Sum_probs=53.7

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHH-------hcCCcEEEEEeeCCCHHHHHHHHHH---H
Q 027248           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLK-------ARGIEVIGVVCHVSNGQQRKNLINQ---T   83 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~-------~~~~~~~~~~~Dv~~~~~v~~~~~~---~   83 (226)
                      +|-+. |.|-+|.++++.|++.|++|.+.+|++++.+.+...-.       +......++..-+.+.+.++.++..   +
T Consensus         3 kIg~I-GlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~~~~~v~~~~~~~   81 (162)
T d3cuma2           3 QIAFI-GLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL   81 (162)
T ss_dssp             EEEEE-CCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCHHHHHHHHHSTTCH
T ss_pred             EEEEE-EEHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccchhhHHHHHhccccc
Confidence            45566 56899999999999999999999999887666543211       1111233455567777777777643   3


Q ss_pred             HHHhCCCCEEEEcCC
Q 027248           84 IEKFGKIDVVVSNAA   98 (226)
Q Consensus        84 ~~~~~~id~li~nag   98 (226)
                      .....+=+++|...-
T Consensus        82 ~~~l~~g~iiid~st   96 (162)
T d3cuma2          82 LAHIAPGTLVLECST   96 (162)
T ss_dssp             HHHSCTTCEEEECSC
T ss_pred             cccCCCCCEEEECCC
Confidence            333333345554443

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=95.41  E-value=0.22  Score=38.52  Aligned_cols=118  Identities=10%  Similarity=0.001  Sum_probs=69.8

Q ss_pred             CCCEEEEEcC-CCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcC---CcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248           11 QGKVAIVTAS-TQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG---IEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus        11 ~gk~vlItGa-~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      +|++||=..+ +|+++.+    +++.|++|+.++.++..++.+.+.+...+   .++.++..|+      -+++++..++
T Consensus       132 ~~~rVLdlf~~tG~~sl~----aa~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~------~~~l~~~~~~  201 (309)
T d2igta1         132 RPLKVLNLFGYTGVASLV----AAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDA------MKFIQREERR  201 (309)
T ss_dssp             SCCEEEEETCTTCHHHHH----HHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCH------HHHHHHHHHH
T ss_pred             CCCeEEEecCCCcHHHHH----HHhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCH------HHhHHHHhhc
Confidence            5677775554 5555544    45679999999999998888777555432   2467776665      3445555566


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEecc
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~  148 (226)
                      ..++|++|.++-.....+.-.....   +..+.       .+.+.+..++..+|.++++++.
T Consensus       202 ~~~fD~IilDPP~f~~~~~~~~~~~---~~~~~-------~l~~~~~~ll~~~g~~ll~t~~  253 (309)
T d2igta1         202 GSTYDIILTDPPKFGRGTHGEVWQL---FDHLP-------LMLDICREILSPKALGLVLTAY  253 (309)
T ss_dssp             TCCBSEEEECCCSEEECTTCCEEEH---HHHHH-------HHHHHHHHTBCTTCCEEEEEEC
T ss_pred             CCCCCEEEECCCcccccccchhHHH---HHHHH-------HHHHHHHHhcCCCCCEEEEecC
Confidence            6789999998764321111111111   11111       2345566666667765555544

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.40  E-value=0.012  Score=41.84  Aligned_cols=39  Identities=28%  Similarity=0.363  Sum_probs=35.4

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCc
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ   46 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~   46 (226)
                      .+++||.++|.|-|.=+|+-++..|+++|+.|..+.++.
T Consensus        25 ~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~   63 (171)
T d1edza1          25 NRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNN   63 (171)
T ss_dssp             CTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSE
T ss_pred             CCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEecccc
Confidence            378999999999999999999999999999998877653

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.38  E-value=0.013  Score=41.19  Aligned_cols=42  Identities=31%  Similarity=0.372  Sum_probs=36.8

Q ss_pred             cccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcch
Q 027248            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN   48 (226)
Q Consensus         6 ~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~   48 (226)
                      ++..+.||+++|.|- |-||+.+|+.+...|++|++.+.++-+
T Consensus        18 t~~~l~Gk~v~V~Gy-G~iG~g~A~~~rg~G~~V~v~e~dp~~   59 (163)
T d1li4a1          18 TDVMIAGKVAVVAGY-GDVGKGCAQALRGFGARVIITEIDPIN   59 (163)
T ss_dssp             HCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             hCceecCCEEEEecc-ccccHHHHHHHHhCCCeeEeeecccch
Confidence            455689999999985 589999999999999999999998744

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.35  E-value=0.05  Score=39.06  Aligned_cols=106  Identities=10%  Similarity=0.108  Sum_probs=69.9

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCC-cEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI-EVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      +++++||=.|++.|.   .+..|+++|++|+.++.+++.++.+.+...+.+. .+.+...|+.+..-           -+
T Consensus        29 ~~~grvLDiGcG~G~---~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~~~-----------~~   94 (198)
T d2i6ga1          29 VAPGRTLDLGCGNGR---NSLYLAANGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTLTF-----------DG   94 (198)
T ss_dssp             SCSCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTCCC-----------CC
T ss_pred             CCCCcEEEECCCCCH---HHHHHHHHhhhhccccCcHHHHHHHHHHhhhccccchhhhheecccccc-----------cc
Confidence            356789999986543   5668889999999999999988887776666554 46677777765431           14


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEec
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISS  147 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS  147 (226)
                      .+|+++.+.-+..       .+.+++..           +.+.+...++++|.+++...
T Consensus        95 ~fD~I~~~~~~~~-------~~~~~~~~-----------~l~~~~~~L~pgG~~~~~~~  135 (198)
T d2i6ga1          95 EYDFILSTVVMMF-------LEAQTIPG-----------LIANMQRCTKPGGYNLIVAA  135 (198)
T ss_dssp             CEEEEEEESCGGG-------SCTTHHHH-----------HHHHHHHTEEEEEEEEEEEE
T ss_pred             cccEEEEeeeeec-------CCHHHHHH-----------HHHHHHHHcCCCcEEEEEEe
Confidence            7899987664432       22233333           24445555666777666543

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=95.23  E-value=0.25  Score=34.56  Aligned_cols=75  Identities=8%  Similarity=0.030  Sum_probs=42.2

Q ss_pred             EEEEEcCCCchhHH-HHHHHHhC-----CCeEEEEecCcchHHHHHHHHHhc----CCcEEEEEeeCCCHHHHHHHHHHH
Q 027248           14 VAIVTASTQGIGFG-IAERLGLE-----GASVVVSSRKQKNVDEAVVKLKAR----GIEVIGVVCHVSNGQQRKNLINQT   83 (226)
Q Consensus        14 ~vlItGa~~giG~a-~~~~l~~~-----g~~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~   83 (226)
                      .+.|.||++ +|.. +...++..     +.++++.+.++++++.....+...    +....+...  +|..+        
T Consensus         5 KI~iIGaGs-v~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~~e--------   73 (167)
T d1u8xx1           5 SIVIAGGGS-TFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT--TDPEE--------   73 (167)
T ss_dssp             EEEEECTTS-SSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE--SCHHH--------
T ss_pred             eEEEECCCh-hhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEec--CChhh--------
Confidence            477788855 4433 33344332     237999999999887544333221    333322211  12211        


Q ss_pred             HHHhCCCCEEEEcCCCCC
Q 027248           84 IEKFGKIDVVVSNAAANP  101 (226)
Q Consensus        84 ~~~~~~id~li~nag~~~  101 (226)
                        ....-|++|+.+|...
T Consensus        74 --al~~AD~Vvitag~~~   89 (167)
T d1u8xx1          74 --AFTDVDFVMAHIRVGK   89 (167)
T ss_dssp             --HHSSCSEEEECCCTTH
T ss_pred             --ccCCCCEEEECCCcCC
Confidence              2348999999999753

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=95.01  E-value=0.15  Score=36.05  Aligned_cols=99  Identities=17%  Similarity=0.256  Sum_probs=67.1

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcC--CcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG--IEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      +|.+++=.|+++|   .++..|++.+.+|+.++.+++.++.+.+.+.+.+  .++.++.+|..+          .....+
T Consensus        33 ~g~~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~~----------~~~~~~   99 (186)
T d1l3ia_          33 KNDVAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE----------ALCKIP   99 (186)
T ss_dssp             TTCEEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH----------HHTTSC
T ss_pred             CCCEEEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECchhh----------cccccC
Confidence            4788888898766   3344566677899999999999998888887765  468888887411          112235


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEE
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLI  145 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~  145 (226)
                      .+|.++.+.+...         .   .           .+.+.+...++++|+++..
T Consensus       100 ~~D~v~~~~~~~~---------~---~-----------~~~~~~~~~LkpgG~lvi~  133 (186)
T d1l3ia_         100 DIDIAVVGGSGGE---------L---Q-----------EILRIIKDKLKPGGRIIVT  133 (186)
T ss_dssp             CEEEEEESCCTTC---------H---H-----------HHHHHHHHTEEEEEEEEEE
T ss_pred             CcCEEEEeCcccc---------c---h-----------HHHHHHHHHhCcCCEEEEE
Confidence            8999987754321         1   1           1345566667778877643

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=95.01  E-value=0.057  Score=37.18  Aligned_cols=36  Identities=28%  Similarity=0.332  Sum_probs=29.9

Q ss_pred             CCEEEEE-cCCCchhHHHHHHHHhCCCeEEEEecCcc
Q 027248           12 GKVAIVT-ASTQGIGFGIAERLGLEGASVVVSSRKQK   47 (226)
Q Consensus        12 gk~vlIt-Ga~~giG~a~~~~l~~~g~~v~~~~r~~~   47 (226)
                      ++.++|. .+++-||.++|..|++.|.+|.++.+.+.
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~   75 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL   75 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred             CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence            4555555 46688999999999999999999999764

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=94.89  E-value=0.018  Score=39.86  Aligned_cols=41  Identities=12%  Similarity=0.180  Sum_probs=34.0

Q ss_pred             EEEEcCCCchhHHHHHHHHhCC-CeEEEEecCcchHHHHHHHH
Q 027248           15 AIVTASTQGIGFGIAERLGLEG-ASVVVSSRKQKNVDEAVVKL   56 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g-~~v~~~~r~~~~~~~~~~~~   56 (226)
                      +.+.|+ |-+|.++++.|.+.| ++|.+.+|++++.+.+.++.
T Consensus         3 I~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~   44 (152)
T d1yqga2           3 VYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKEL   44 (152)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHT
T ss_pred             EEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhc
Confidence            566765 999999999999888 78999999998877766553

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.87  E-value=0.076  Score=34.72  Aligned_cols=35  Identities=17%  Similarity=0.182  Sum_probs=31.0

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcc
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK   47 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~   47 (226)
                      .|.++|.|| |-+|.++|..|.+.|.+|.++.|.+.
T Consensus        22 p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          22 PKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECC-CccceeeeeeecccccEEEEEEecce
Confidence            478888875 68999999999999999999998774

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=94.80  E-value=0.0079  Score=43.93  Aligned_cols=75  Identities=25%  Similarity=0.178  Sum_probs=53.7

Q ss_pred             cccccCCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHH
Q 027248            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTI   84 (226)
Q Consensus         6 ~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (226)
                      +..+++||+|+=.|+++|+   ++..++..|+ +|+.++.+++.++.+.+.    ..++.++.+|+.+.           
T Consensus        43 ~~~dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~N----~~~~~~~~~D~~~l-----------  104 (197)
T d1ne2a_          43 NDGNIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKRN----CGGVNFMVADVSEI-----------  104 (197)
T ss_dssp             HHTSSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHHH----CTTSEEEECCGGGC-----------
T ss_pred             HcCCCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHHc----cccccEEEEehhhc-----------
Confidence            3467899999999988773   3344666775 599999998776554432    34577888898543           


Q ss_pred             HHhCCCCEEEEcCCCC
Q 027248           85 EKFGKIDVVVSNAAAN  100 (226)
Q Consensus        85 ~~~~~id~li~nag~~  100 (226)
                        .+++|++|.|+-+.
T Consensus       105 --~~~fD~Vi~NPPfg  118 (197)
T d1ne2a_         105 --SGKYDTWIMNPPFG  118 (197)
T ss_dssp             --CCCEEEEEECCCC-
T ss_pred             --CCcceEEEeCcccc
Confidence              25899999998753

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=94.66  E-value=0.032  Score=41.53  Aligned_cols=49  Identities=22%  Similarity=0.356  Sum_probs=41.8

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKL   56 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~   56 (226)
                      +.+++||+++|-| -|.+|..+++.|.+.|++|+..+.+...++....+.
T Consensus        34 ~~~l~g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~   82 (230)
T d1leha1          34 SDSLEGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE   82 (230)
T ss_dssp             SCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhc
Confidence            3568999999886 578999999999999999999999888777666554

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=94.66  E-value=0.069  Score=40.69  Aligned_cols=77  Identities=22%  Similarity=0.276  Sum_probs=52.1

Q ss_pred             CEEEEEcCCCc-hhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCC--cEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           13 KVAIVTASTQG-IGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI--EVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        13 k~vlItGa~~g-iG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      ++++-.|+++| |+.+++ +  ...++|+.++.+++.++-+.+-....+.  .+.+...|+.+.         ..+..++
T Consensus       112 ~~vld~g~GsG~i~~~la-~--~~~~~v~a~Dis~~Al~~A~~Na~~~~~~~~~~i~~~~~~~~---------~~~~~~~  179 (271)
T d1nv8a_         112 KTVADIGTGSGAIGVSVA-K--FSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP---------FKEKFAS  179 (271)
T ss_dssp             CEEEEESCTTSHHHHHHH-H--HSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG---------GGGGTTT
T ss_pred             cEEEEeeeeeehhhhhhh-h--cccceeeechhhhhHHHHHHHHHHHcCCCceeEEeecccccc---------cccccCc
Confidence            45665665555 454443 2  3467899999999998887776665543  456667777543         2233479


Q ss_pred             CCEEEEcCCCCC
Q 027248           90 IDVVVSNAAANP  101 (226)
Q Consensus        90 id~li~nag~~~  101 (226)
                      +|++|.|+-+..
T Consensus       180 fDlIVsNPPYI~  191 (271)
T d1nv8a_         180 IEMILSNPPYVK  191 (271)
T ss_dssp             CCEEEECCCCBC
T ss_pred             ccEEEEcccccC
Confidence            999999998764

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=94.65  E-value=0.031  Score=40.24  Aligned_cols=39  Identities=18%  Similarity=0.036  Sum_probs=34.0

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcc
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK   47 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~   47 (226)
                      ..+.|+++.|. |.|.||+.+++.+...|++|+..++...
T Consensus        40 ~~l~~~~vgii-G~G~IG~~va~~l~~fg~~v~~~d~~~~   78 (188)
T d1sc6a1          40 FEARGKKLGII-GYGHIGTQLGILAESLGMYVYFYDIENK   78 (188)
T ss_dssp             CCSTTCEEEEE-CCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             ccccceEEEEe-ecccchhhhhhhcccccceEeecccccc
Confidence            35789999998 4689999999999999999999998654

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=94.55  E-value=0.054  Score=39.58  Aligned_cols=102  Identities=17%  Similarity=0.119  Sum_probs=69.8

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcC-CcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG-IEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      +++||=.|++.|.-   +..|++.|.+|+.++-+++-++.+.+.+...+ .++.+...|..+..-          ..+.+
T Consensus        16 ~~rVLDiGcG~G~~---~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~l~~----------~~~~f   82 (231)
T d1vl5a_          16 NEEVLDVATGGGHV---ANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPF----------TDERF   82 (231)
T ss_dssp             CCEEEEETCTTCHH---HHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCS----------CTTCE
T ss_pred             cCEEEEecccCcHH---HHHHHHhCCEEEEEECCHHHHhhhhhcccccccccccccccccccccc----------ccccc
Confidence            57899999887743   46678889999999999988877766665554 468888888876421          12489


Q ss_pred             CEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEe
Q 027248           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (226)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~s  146 (226)
                      |+++++..+... .     +.   +           .+++.+...|+++|++++..
T Consensus        83 D~v~~~~~l~~~-~-----d~---~-----------~~l~~~~r~LkpgG~l~i~~  118 (231)
T d1vl5a_          83 HIVTCRIAAHHF-P-----NP---A-----------SFVSEAYRVLKKGGQLLLVD  118 (231)
T ss_dssp             EEEEEESCGGGC-S-----CH---H-----------HHHHHHHHHEEEEEEEEEEE
T ss_pred             cccccccccccc-C-----CH---H-----------HHHHHHHHhcCCCcEEEEEe
Confidence            999988765431 1     11   1           23455666677788877653

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=94.42  E-value=0.061  Score=38.98  Aligned_cols=39  Identities=21%  Similarity=0.075  Sum_probs=33.9

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcc
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK   47 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~   47 (226)
                      ..+.||++.|.| .|.||+.+++.+...|++|+..++...
T Consensus        41 ~~l~~ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~   79 (199)
T d1dxya1          41 KELGQQTVGVMG-TGHIGQVAIKLFKGFGAKVIAYDPYPM   79 (199)
T ss_dssp             CCGGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             ccccceeeeeee-cccccccccccccccceeeeccCCccc
Confidence            357899999997 468999999999999999999998654

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.39  E-value=0.081  Score=35.00  Aligned_cols=35  Identities=17%  Similarity=0.169  Sum_probs=30.9

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcc
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK   47 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~   47 (226)
                      .|.++|.|| |-||.++|..|.+.|.+|.++.+.+.
T Consensus        23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~~   57 (122)
T d1v59a2          23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQPQ   57 (122)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCeEEEECC-CchHHHHHHHHHhhCcceeEEEeccc
Confidence            478888875 68999999999999999999998764

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.38  E-value=0.056  Score=35.96  Aligned_cols=35  Identities=17%  Similarity=0.191  Sum_probs=30.9

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcc
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK   47 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~   47 (226)
                      .|+++|.||+ -||.++|..|.+.|.+|.++.|++.
T Consensus        22 pk~vvIvGgG-~iG~E~A~~l~~~G~~Vtlv~~~~~   56 (125)
T d3grsa2          22 PGRSVIVGAG-YIAVEMAGILSALGSKTSLMIRHDK   56 (125)
T ss_dssp             CSEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCEEEEEcCC-ccHHHHHHHHhcCCcEEEEEeeccc
Confidence            4789999875 6999999999999999999999753

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=94.33  E-value=0.28  Score=33.68  Aligned_cols=52  Identities=19%  Similarity=0.072  Sum_probs=35.5

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCC--CeEEEEecCcchHHHHHHHHHhcCCcEEE
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEG--ASVVVSSRKQKNVDEAVVKLKARGIEVIG   65 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~   65 (226)
                      |++.|.|+||.||.....-+.+..  ++|+.+.-+. +.+.+.++..+..++..+
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~-N~~~L~~q~~~f~pk~v~   55 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGK-NVTRMVEQCLEFSPRYAV   55 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESS-CHHHHHHHHHHHCCSEEE
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecC-cHHHHHHHHHHHhhcccc
Confidence            679999999999999999888763  6766544332 334555555555555543

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=94.22  E-value=0.031  Score=38.68  Aligned_cols=41  Identities=12%  Similarity=0.124  Sum_probs=34.4

Q ss_pred             EEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHH
Q 027248           15 AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKL   56 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~   56 (226)
                      +.+. |.|-+|.++++.|.+.|+++++.+|+.++.++..+++
T Consensus         3 Ig~I-G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~   43 (152)
T d2ahra2           3 IGII-GVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL   43 (152)
T ss_dssp             EEEE-CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH
T ss_pred             EEEE-eccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc
Confidence            3444 6789999999999999999999999998877766655

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=94.21  E-value=0.3  Score=34.62  Aligned_cols=103  Identities=13%  Similarity=0.153  Sum_probs=67.9

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhc---CCcEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR---GIEVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      ..+++|+=.|++.|   .++..+++.+.+|..++.++...+.+.+.+...   ..++.++..|+.+.-.           
T Consensus        51 ~~~~~VLDiGcG~G---~~~~~la~~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~~~~~-----------  116 (194)
T d1dusa_          51 DKDDDILDLGCGYG---VIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVK-----------  116 (194)
T ss_dssp             CTTCEEEEETCTTS---HHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCT-----------
T ss_pred             CCCCeEEEEeecCC---hhHHHHHhhccccceeeeccccchhHHHHHHHhCCccceEEEEEcchhhhhc-----------
Confidence            35789999998766   344566778889999999988877776655543   2357888888754211           


Q ss_pred             hCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEE
Q 027248           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLI  145 (226)
Q Consensus        87 ~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~  145 (226)
                      -+.+|+++.|..+..        ..+..+           .+++.+...|+++|.++++
T Consensus       117 ~~~fD~Ii~~~p~~~--------~~~~~~-----------~~l~~~~~~LkpgG~l~i~  156 (194)
T d1dusa_         117 DRKYNKIITNPPIRA--------GKEVLH-----------RIIEEGKELLKDNGEIWVV  156 (194)
T ss_dssp             TSCEEEEEECCCSTT--------CHHHHH-----------HHHHHHHHHEEEEEEEEEE
T ss_pred             cCCceEEEEcccEEe--------cchhhh-----------hHHHHHHHhcCcCcEEEEE
Confidence            148999999876532        111111           2355566667777876553

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=94.12  E-value=0.033  Score=41.11  Aligned_cols=33  Identities=33%  Similarity=0.310  Sum_probs=28.6

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCc
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ   46 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~   46 (226)
                      |.|+|.|| |-.|.+.|..|+++|++|.+++|+.
T Consensus         7 ~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           7 KRVVVLGS-GVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            67888875 5779999999999999999999864

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=94.00  E-value=0.099  Score=34.30  Aligned_cols=35  Identities=14%  Similarity=0.111  Sum_probs=30.4

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcc
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK   47 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~   47 (226)
                      .|+++|.|| |-+|.++|..|++.|.+|.++.|...
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~   56 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGNR   56 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhcc
Confidence            478888875 68999999999999999999999753

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=93.96  E-value=0.33  Score=31.53  Aligned_cols=81  Identities=15%  Similarity=0.221  Sum_probs=56.2

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHH-HHHHHHHHHHHHhCCC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQ-QRKNLINQTIEKFGKI   90 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~v~~~~~~~~~~~~~i   90 (226)
                      ||+|+|.=-..-+...+...|.+.|++|+..+.+..   ++.+.+.+..+++.++  |+.-++ +=-++++++++....+
T Consensus         1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~~---~al~~~~~~~~dliil--D~~mp~~~G~e~~~~ir~~~~~~   75 (118)
T d1u0sy_           1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGR---EAVEKYKELKPDIVTM--DITMPEMNGIDAIKEIMKIDPNA   75 (118)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHH---HHHHHHHHHCCSEEEE--ECSCGGGCHHHHHHHHHHHCTTC
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCHH---HHHHHHHhccCCEEEE--ecCCCCCCHHHHHHHHHHhCCCC
Confidence            789999999999999999999999999876655443   3344444445566554  655443 2335677777776677


Q ss_pred             CEEEEcC
Q 027248           91 DVVVSNA   97 (226)
Q Consensus        91 d~li~na   97 (226)
                      -+++..+
T Consensus        76 pvi~ls~   82 (118)
T d1u0sy_          76 KIIVCSA   82 (118)
T ss_dssp             CEEEEEC
T ss_pred             cEEEEEc
Confidence            7776653

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.81  E-value=0.095  Score=40.28  Aligned_cols=24  Identities=25%  Similarity=0.130  Sum_probs=20.7

Q ss_pred             CchhHHHHHHHHhCCCeEEEEecC
Q 027248           22 QGIGFGIAERLGLEGASVVVSSRK   45 (226)
Q Consensus        22 ~giG~a~~~~l~~~g~~v~~~~r~   45 (226)
                      |..|.++|+.|..+|+.|+++.+.
T Consensus        46 Gk~G~alA~~~~~~Ga~V~li~g~   69 (290)
T d1p9oa_          46 GRRGATSAEAFLAAGYGVLFLYRA   69 (290)
T ss_dssp             CHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             hHHHHHHHHHHHHcCCEEEEEecC
Confidence            457999999999999999988654

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=93.73  E-value=0.059  Score=35.70  Aligned_cols=36  Identities=14%  Similarity=0.209  Sum_probs=31.5

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcch
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN   48 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~   48 (226)
                      +|+++|.|| |-+|.++|..|.+.|.+|.++.+.+.-
T Consensus        30 ~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~~   65 (121)
T d1d7ya2          30 QSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPRL   65 (121)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred             CCeEEEECc-chhHHHHHHHhhcccceEEEEeecccc
Confidence            688888774 799999999999999999999998754

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=93.67  E-value=0.063  Score=35.61  Aligned_cols=37  Identities=22%  Similarity=0.208  Sum_probs=31.8

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcc
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK   47 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~   47 (226)
                      -++|+++|.| +|.+|.++|..|.+.|.+|.++.+.+.
T Consensus        28 ~~~k~vvViG-gG~iG~E~A~~l~~~g~~Vtlie~~~~   64 (123)
T d1nhpa2          28 PEVNNVVVIG-SGYIGIEAAEAFAKAGKKVTVIDILDR   64 (123)
T ss_dssp             TTCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             cCCCEEEEEC-ChHHHHHHHHHhhccceEEEEEEecCc
Confidence            3578888886 569999999999999999999988764

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=93.66  E-value=0.21  Score=35.44  Aligned_cols=112  Identities=13%  Similarity=0.175  Sum_probs=69.5

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCC---------------HHHH
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN---------------GQQR   76 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~---------------~~~v   76 (226)
                      .-.++|.|| |-.|+.-++-....|++|.+.+.+.+++++..+...    +.  +..+..+               ++..
T Consensus        29 pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~~----~~--i~~~~~~~~~~~~~~gyA~~~s~~~~  101 (183)
T d1l7da1          29 PARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGG----KF--ITVDDEAMKTAETAGGYAKEMGEEFR  101 (183)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTC----EE--CCC-----------------------
T ss_pred             CcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhhc----ce--EEEeccccccccccccchhhcCHHHH
Confidence            347788875 567888888889999999999999988777654332    11  1111111               1112


Q ss_pred             HHHHHHHHHHhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCC
Q 027248           77 KNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG  150 (226)
Q Consensus        77 ~~~~~~~~~~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~  150 (226)
                      +..-+.+.+....-|++|..+-+... +...                   .+.+..+..|+++.-||-++...+
T Consensus       102 ~~~~~~l~~~l~~aDlVI~talipG~-~aP~-------------------lit~~mv~~Mk~GSVIVDvaidqG  155 (183)
T d1l7da1         102 KKQAEAVLKELVKTDIAITTALIPGK-PAPV-------------------LITEEMVTKMKPGSVIIDLAVEAG  155 (183)
T ss_dssp             CCHHHHHHHHHTTCSEEEECCCCTTS-CCCC-------------------CSCHHHHTTSCTTCEEEETTGGGT
T ss_pred             HHHHHHHHHHHHhhhhheeeeecCCc-ccce-------------------eehHHHHHhcCCCcEEEEEeecCC
Confidence            22233444455689999998877652 2222                   234556667787888888876644

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=93.66  E-value=0.02  Score=40.96  Aligned_cols=41  Identities=15%  Similarity=0.185  Sum_probs=31.7

Q ss_pred             EEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHh
Q 027248           15 AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA   58 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~   58 (226)
                      |.|.|+ |..|.+++..|++.|++|.+.+|..+.  +..+.+.+
T Consensus         3 I~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~--~~~~~i~~   43 (180)
T d1txga2           3 VSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDT--EILKSISA   43 (180)
T ss_dssp             EEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGH--HHHHHHHT
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEEecccH--HHHHHHhh
Confidence            567765 799999999999999999999996553  33444443

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=93.65  E-value=0.13  Score=35.51  Aligned_cols=54  Identities=15%  Similarity=0.164  Sum_probs=39.4

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhC--CCeEEEEecCcchHHHHHHHHHhcCCcEEEE
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLE--GASVVVSSRKQKNVDEAVVKLKARGIEVIGV   66 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~   66 (226)
                      .|++.|.|+||.||.....-+.+.  .++|+.+.-+. +.+.+.++..+..++..++
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~-N~~~L~~q~~ef~Pk~v~i   57 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR-NVKDLADAAKRTNAKRAVI   57 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS-CHHHHHHHHHHTTCSEEEE
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCC-CHHHHHHHHHhhcccccee
Confidence            489999999999999999988775  47776655443 4456666666666766543

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=93.52  E-value=0.15  Score=33.40  Aligned_cols=36  Identities=22%  Similarity=0.121  Sum_probs=31.3

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcc
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK   47 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~   47 (226)
                      ..|.++|.|| |-||.++|..|++.|.+|.++.++..
T Consensus        21 ~p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~~   56 (119)
T d3lada2          21 VPGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMDK   56 (119)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeecc
Confidence            3588898875 69999999999999999999998764

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=93.34  E-value=0.17  Score=32.91  Aligned_cols=36  Identities=14%  Similarity=0.037  Sum_probs=30.7

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcch
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN   48 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~   48 (226)
                      .|.++|.| +|-+|.++|..|.+.|.+|.++.|.+.-
T Consensus        21 p~~vvIiG-gG~ig~E~A~~l~~~G~~Vtlve~~~~~   56 (116)
T d1gesa2          21 PERVAVVG-AGYIGVELGGVINGLGAKTHLFEMFDAP   56 (116)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred             CCEEEEEC-CChhhHHHHHHhhccccEEEEEeecchh
Confidence            47788776 4689999999999999999999998643

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=93.19  E-value=0.12  Score=34.12  Aligned_cols=35  Identities=26%  Similarity=0.244  Sum_probs=30.1

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcc
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK   47 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~   47 (226)
                      +|.++|.| +|-+|.++|..|.+.|.+|.++.|.+.
T Consensus        32 ~~~vvIiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~~   66 (122)
T d1xhca2          32 SGEAIIIG-GGFIGLELAGNLAEAGYHVKLIHRGAM   66 (122)
T ss_dssp             HSEEEEEE-CSHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred             CCcEEEEC-CcHHHHHHHHHhhcccceEEEEecccc
Confidence            47788776 479999999999999999999998763

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=92.95  E-value=0.047  Score=42.05  Aligned_cols=39  Identities=23%  Similarity=0.209  Sum_probs=33.4

Q ss_pred             ccccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEec
Q 027248            5 KMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSR   44 (226)
Q Consensus         5 ~~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r   44 (226)
                      .+..+++||+++|-|- |.+|..+++.|.+.|++|+.++-
T Consensus        29 gl~~~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vsD   67 (293)
T d1hwxa1          29 GMTPGFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVGE   67 (293)
T ss_dssp             TCCSSSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             cCCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEEc
Confidence            3456789999999985 79999999999999999887664

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=92.90  E-value=0.26  Score=33.29  Aligned_cols=87  Identities=14%  Similarity=-0.020  Sum_probs=58.1

Q ss_pred             CCCEEEEEcCC---CchhHHHHHHHHhCCCeEEEEecCcchHHH--HHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248           11 QGKVAIVTAST---QGIGFGIAERLGLEGASVVVSSRKQKNVDE--AVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus        11 ~gk~vlItGa~---~giG~a~~~~l~~~g~~v~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      +.|++.|.|+|   +..|..+.+.|.+.|++|+.+.-+.+....  ....+.+-...+.. ..=+..++.+..+++++.+
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~G~~~~~sl~dlp~~iD~-v~i~vp~~~~~~~~~e~~~   96 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDIPDKIEV-VDLFVKPKLTMEYVEQAIK   96 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGCSSCCSE-EEECSCHHHHHHHHHHHHH
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccCCCcccccccccCccceE-EEEEeCHHHHHHHHHHHHH
Confidence            57999999998   679999999999999999888766443221  01111111111111 1124667888888998887


Q ss_pred             HhCCCCEEEEcCCCC
Q 027248           86 KFGKIDVVVSNAAAN  100 (226)
Q Consensus        86 ~~~~id~li~nag~~  100 (226)
                      .  .+..++...|..
T Consensus        97 ~--g~k~v~~~~G~~  109 (139)
T d2d59a1          97 K--GAKVVWFQYNTY  109 (139)
T ss_dssp             H--TCSEEEECTTCC
T ss_pred             h--CCCEEEEecccc
Confidence            6  567888777754

>d2fr1a2 c.2.1.2 (A:1448-1656) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=92.85  E-value=1.1  Score=31.88  Aligned_cols=143  Identities=15%  Similarity=0.118  Sum_probs=77.9

Q ss_pred             CCCEEEEEcCC--CchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248           11 QGKVAIVTAST--QGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus        11 ~gk~vlItGa~--~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      .|+++++....  ...+.++...|...|..++.+.-+.+.                       +.+   .+.+ .....+
T Consensus        24 ~g~~lv~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~-----------------------~~~---~l~~-~~~~~~   76 (209)
T d2fr1a2          24 DGTWLVAKYAGTADETSTAAREALESAGARVRELVVDARC-----------------------GRD---ELAE-RLRSVG   76 (209)
T ss_dssp             CSEEEEEECTTSSHHHHHHHHHHHHTTSCEEEEEECCTTC-----------------------CHH---HHHH-HHTTSC
T ss_pred             CCcEEEEeCCCCchHHHHHHHHHHHhCCCeEEEecCCCcc-----------------------CHH---HHHH-HhhccC
Confidence            34444444332  236667777888888776655443321                       111   1222 223346


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEeccCCcCCCCCCchhhHhHHHHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALL  168 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~  168 (226)
                      .++.+|+-.+.........+..        ...+...+.++|++...- ...++.+++...... .+....-+...+++.
T Consensus        77 ~~~~vv~l~~~~~~~~~~~~~~--------~~~~~~~l~l~qal~~~~-~~~~l~~vT~~a~~~-~~~d~~~~p~~A~l~  146 (209)
T d2fr1a2          77 EVAGVLSLLAVDEAEPEEAPLA--------LASLADTLSLVQAMVSAE-LGCPLWTVTESAVAT-GPFERVRNAAHGALW  146 (209)
T ss_dssp             CCSEEEECTTTTCCCCSSCGGG--------CHHHHHHHHHHHHHHHTT-CCCCEEEEEESCSCS-STTSCCSCGGGHHHH
T ss_pred             CCCeEEEeCCCCCCCCcchhHH--------HHHHHHHHHHHHHHHhCC-CCCcEEEEEcCCccc-CCCcccCCHhHHhHH
Confidence            7888998876543211111111        122445566666665432 235677766554322 233344567899999


Q ss_pred             HHHHHHHHHhCC-CeEEEEEecC
Q 027248          169 GLTKALAAEMAP-DTRVNCVAPG  190 (226)
Q Consensus       169 ~~~~~la~e~~~-~i~v~~v~Pg  190 (226)
                      +|.|+++.|+.. .+++..+.+.
T Consensus       147 Gl~r~~~~E~P~l~~~~vDl~~~  169 (209)
T d2fr1a2         147 GVGRVIALENPAVWGGLVDVPAG  169 (209)
T ss_dssp             HHHHHHHHHCGGGEEEEEEECTT
T ss_pred             HHHHHHHHhCCCceEEEEECCCC
Confidence            999999999755 4555555443

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=92.84  E-value=0.13  Score=33.88  Aligned_cols=36  Identities=22%  Similarity=0.225  Sum_probs=31.5

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcch
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN   48 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~   48 (226)
                      .|.++|.|| |-||.++|..|.+.|.+|.++.|++.-
T Consensus        25 p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~~   60 (123)
T d1dxla2          25 PKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASEI   60 (123)
T ss_dssp             CSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred             CCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEcccc
Confidence            578888875 699999999999999999999998753

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=92.79  E-value=0.2  Score=36.62  Aligned_cols=78  Identities=19%  Similarity=0.172  Sum_probs=60.3

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcC-CcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG-IEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      +|.+||-.|+++|--.++.-++.  |.+|+.+.++++-.+.+.+.+.+.+ .++.++..|..+-.          ...+.
T Consensus        78 ~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~g~----------~~~~p  145 (215)
T d1jg1a_          78 PGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGF----------PPKAP  145 (215)
T ss_dssp             TTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC----------GGGCC
T ss_pred             ccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHcCCceeEEEECccccCC----------cccCc
Confidence            46789999999998888877776  4679999999888877777777765 56888888875421          12358


Q ss_pred             CCEEEEcCCCC
Q 027248           90 IDVVVSNAAAN  100 (226)
Q Consensus        90 id~li~nag~~  100 (226)
                      .|.++.+++..
T Consensus       146 fD~Iiv~~a~~  156 (215)
T d1jg1a_         146 YDVIIVTAGAP  156 (215)
T ss_dssp             EEEEEECSBBS
T ss_pred             ceeEEeecccc
Confidence            99999888874

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=92.74  E-value=0.057  Score=34.88  Aligned_cols=43  Identities=12%  Similarity=0.130  Sum_probs=34.1

Q ss_pred             cccccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcc
Q 027248            4 MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK   47 (226)
Q Consensus         4 ~~~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~   47 (226)
                      ++-..+|+||+|+|.|++ .=|..++..|++.+.++++..|+..
T Consensus        24 y~~~~~f~gK~VlVVG~g-~Sa~dia~~l~~~ak~v~~~~~r~~   66 (107)
T d2gv8a2          24 FREPELFVGESVLVVGGA-SSANDLVRHLTPVAKHPIYQSLLGG   66 (107)
T ss_dssp             CCCGGGGTTCCEEEECSS-HHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred             CcchhhcCCCeEEEECCC-CCHHHHHHHHHHhcCEEEEEEecCc
Confidence            455677999999999976 5577899999998888777777654

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=92.69  E-value=0.16  Score=33.47  Aligned_cols=34  Identities=21%  Similarity=0.129  Sum_probs=29.1

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCc
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ   46 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~   46 (226)
                      .|.++|.|| |-||.++|..|.+.|.+|.++.|++
T Consensus        20 P~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~~   53 (122)
T d1h6va2          20 PGKTLVVGA-SYVALECAGFLAGIGLDVTVMVRSI   53 (122)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             CCeEEEECC-CccHHHHHHHHhhcCCeEEEEEech
Confidence            467888875 6999999999999999999998763

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.66  E-value=0.066  Score=38.75  Aligned_cols=37  Identities=16%  Similarity=0.097  Sum_probs=31.0

Q ss_pred             EEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHH
Q 027248           15 AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEA   52 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~   52 (226)
                      |.|. |.|-+|..++..|++.|++|+..+.+++..+..
T Consensus         3 I~Vi-GlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~l   39 (202)
T d1mv8a2           3 ISIF-GLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLI   39 (202)
T ss_dssp             EEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             EEEE-CCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHh
Confidence            4555 688999999999999999999999988665443

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=92.56  E-value=0.37  Score=33.63  Aligned_cols=81  Identities=10%  Similarity=0.054  Sum_probs=50.8

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      .+|+++|=.|+++|.   ++.+.+++|++|+.++.+++..+.+.+.+...+....+..   .+.+.   +........++
T Consensus        40 ~~g~~vLDl~~G~G~---~~i~a~~~ga~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~---~~~d~---~~~~~~~~~~~  110 (171)
T d1ws6a1          40 PRRGRFLDPFAGSGA---VGLEAASEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVA---LPVEV---FLPEAKAQGER  110 (171)
T ss_dssp             TTCCEEEEETCSSCH---HHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEEC---SCHHH---HHHHHHHTTCC
T ss_pred             cCCCeEEEeccccch---hhhhhhhccchhhhcccCHHHHhhhhHHHHhhccccceee---eehhc---ccccccccCCc
Confidence            367777766655442   3345667899999999999988877776665554433322   22222   23333334468


Q ss_pred             CCEEEEcCCC
Q 027248           90 IDVVVSNAAA   99 (226)
Q Consensus        90 id~li~nag~   99 (226)
                      .|+++.++-+
T Consensus       111 fD~If~DPPY  120 (171)
T d1ws6a1         111 FTVAFMAPPY  120 (171)
T ss_dssp             EEEEEECCCT
T ss_pred             cceeEEcccc
Confidence            9999988754

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=92.48  E-value=0.1  Score=35.75  Aligned_cols=38  Identities=18%  Similarity=0.098  Sum_probs=30.7

Q ss_pred             EEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHH
Q 027248           15 AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAV   53 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~   53 (226)
                      |-|. |.|-+|.++++.|.++|++|+..++++.+.....
T Consensus         3 IgiI-G~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~   40 (152)
T d1i36a2           3 VGFI-GFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIER   40 (152)
T ss_dssp             EEEE-SCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHH
T ss_pred             EEEE-cHHHHHHHHHHHHHHCCCeEEEEcCchhHHHHHh
Confidence            4455 4599999999999999999999988877655443

>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: BC2162-like
domain: Methyltransferase BC2162
species: Bacillus cereus [TaxId: 1396]

Probab=92.36  E-value=0.09  Score=40.02  Aligned_cols=102  Identities=13%  Similarity=0.052  Sum_probs=69.2

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHh---CCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGL---EGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~---~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      ++++||=.|++.|   .++..|++   .|.+|+.++.++..++.+.+.....+.++.+...|+.+.+.           .
T Consensus        27 ~~~~ILDiGcG~G---~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~f~~~d~~~~~~-----------~   92 (281)
T d2gh1a1          27 KPVHIVDYGCGYG---YLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIEL-----------N   92 (281)
T ss_dssp             SCCEEEEETCTTT---HHHHHHTTTSCTTCEEEEEECCHHHHHHHHHHHHSSSSEEEEEESCTTTCCC-----------S
T ss_pred             CcCEEEEecCcCC---HHHHHHHHhCCCCCEEEEEecchhHhhhhhcccccccccccccccccccccc-----------c
Confidence            4678998997665   23334443   47889999999998888888777777788888888876431           1


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEe
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~s  146 (226)
                      +.+|+++++..... ..     ++              -.+++.+...++++|.++...
T Consensus        93 ~~fD~v~~~~~l~~-~~-----d~--------------~~~l~~~~~~LkpgG~lii~~  131 (281)
T d2gh1a1          93 DKYDIAICHAFLLH-MT-----TP--------------ETMLQKMIHSVKKGGKIICFE  131 (281)
T ss_dssp             SCEEEEEEESCGGG-CS-----SH--------------HHHHHHHHHTEEEEEEEEEEE
T ss_pred             CCceEEEEehhhhc-CC-----CH--------------HHHHHHHHHHcCcCcEEEEEE
Confidence            47999998765532 11     11              123456666777788777654

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=92.31  E-value=0.12  Score=33.79  Aligned_cols=37  Identities=14%  Similarity=0.139  Sum_probs=31.9

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcc
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK   47 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~   47 (226)
                      ..+|.++|.| +|-+|.++|..|.+.|.+|.++.|.+.
T Consensus        20 ~~~~~vvVvG-gG~ig~E~A~~l~~~g~~vt~i~~~~~   56 (121)
T d1mo9a2          20 EPGSTVVVVG-GSKTAVEYGCFFNATGRRTVMLVRTEP   56 (121)
T ss_dssp             CCCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhcchhheEeeccch
Confidence            3578898876 478999999999999999999999764

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.19  E-value=0.34  Score=37.18  Aligned_cols=76  Identities=17%  Similarity=0.199  Sum_probs=52.4

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHH
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQTI   84 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (226)
                      ..++||+||-.|++.|+   ++..+++.|+ +|+.++.++... .+.+...+.  ..++.++..|+.+...         
T Consensus        32 ~~~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~~-~a~~~~~~~~~~~~i~~~~~~~~~l~~---------   98 (311)
T d2fyta1          32 HIFKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEILY-QAMDIIRLNKLEDTITLIKGKIEEVHL---------   98 (311)
T ss_dssp             GGTTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHHH-HHHHHHHHTTCTTTEEEEESCTTTSCC---------
T ss_pred             ccCCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHHH-HHHHHHHHhCCCccceEEEeeHHHhcC---------
Confidence            34789999999998875   5666777886 599999887543 333333333  3468888888876532         


Q ss_pred             HHhCCCCEEEEcC
Q 027248           85 EKFGKIDVVVSNA   97 (226)
Q Consensus        85 ~~~~~id~li~na   97 (226)
                       ..+++|+++...
T Consensus        99 -~~~~~D~Ivse~  110 (311)
T d2fyta1          99 -PVEKVDVIISEW  110 (311)
T ss_dssp             -SCSCEEEEEECC
T ss_pred             -ccccceEEEEee
Confidence             124899998754

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=92.19  E-value=0.28  Score=33.60  Aligned_cols=81  Identities=9%  Similarity=0.037  Sum_probs=52.3

Q ss_pred             EEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhc------CCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248           15 AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR------GIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      |-+.|- |-+|..+++.|++.|+.+ ...|+.++.....++....      -.+...+...+.+.+.+......+.+...
T Consensus         3 Ig~IGl-G~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~~~~   80 (156)
T d2cvza2           3 VAFIGL-GAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYLR   80 (156)
T ss_dssp             EEEECC-STTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTCC
T ss_pred             EEEEeH-HHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhcccccccc
Confidence            555665 899999999999988754 5778777766665554211      11233444567777888877777766544


Q ss_pred             CCCEEEEcC
Q 027248           89 KIDVVVSNA   97 (226)
Q Consensus        89 ~id~li~na   97 (226)
                      +-..+|...
T Consensus        81 ~~~~iid~s   89 (156)
T d2cvza2          81 EGTYWVDAT   89 (156)
T ss_dssp             TTEEEEECS
T ss_pred             ccccccccc
Confidence            444555444

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=92.17  E-value=0.084  Score=39.40  Aligned_cols=34  Identities=24%  Similarity=0.258  Sum_probs=28.6

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCc
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ   46 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~   46 (226)
                      ||+|+|+||+ -=|+..|.+|++.|++|.++.+++
T Consensus         1 ~KkV~IIGaG-~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGAG-VSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECCS-HHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECcC-HHHHHHHHHHHhCCCCEEEEeCCC
Confidence            6889999764 457888999999999999998764

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=92.02  E-value=0.075  Score=40.11  Aligned_cols=36  Identities=25%  Similarity=0.377  Sum_probs=32.0

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEe
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSS   43 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~   43 (226)
                      ..+++||+++|-| .|.+|..+++.|.+.|++|+.++
T Consensus        31 ~~~l~g~~v~IQG-fGnVG~~~a~~L~e~Gakvvavs   66 (255)
T d1bgva1          31 NDTLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLS   66 (255)
T ss_dssp             TCCSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEe
Confidence            4578999999998 68999999999999999987664

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=91.93  E-value=0.065  Score=38.59  Aligned_cols=32  Identities=16%  Similarity=0.105  Sum_probs=28.2

Q ss_pred             CEEEEEcCCCchhHH-----HHHHHHhCCCeEEEEec
Q 027248           13 KVAIVTASTQGIGFG-----IAERLGLEGASVVVSSR   44 (226)
Q Consensus        13 k~vlItGa~~giG~a-----~~~~l~~~g~~v~~~~r   44 (226)
                      |++.|||.++|+|+.     ++..|+++|++|.+++-
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id~   38 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYKP   38 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEECS
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEECc
Confidence            789999999999986     67889999999998863

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=91.91  E-value=0.098  Score=39.41  Aligned_cols=39  Identities=21%  Similarity=0.184  Sum_probs=33.2

Q ss_pred             cCCCEEEEEcCCCchhHHH-----HHHHHhCCCeEEEEecCcch
Q 027248           10 FQGKVAIVTASTQGIGFGI-----AERLGLEGASVVVSSRKQKN   48 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~-----~~~l~~~g~~v~~~~r~~~~   48 (226)
                      -.|+.++|+.|-||+|+..     +..|+++|.+|.+++-+++.
T Consensus        17 ~~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~~   60 (279)
T d1ihua2          17 RNEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPAA   60 (279)
T ss_dssp             TTSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC-
T ss_pred             cCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence            3577888888899999986     78999999999999999763

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=91.83  E-value=0.27  Score=35.64  Aligned_cols=80  Identities=21%  Similarity=0.215  Sum_probs=56.9

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCC-cEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI-EVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      .|.+||-.|+++|--.++.-++...+.+|+.++.+++.++.+.+.+...+. ++.++..|..+..          ...+.
T Consensus        75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~~~----------~~~~~  144 (213)
T d1dl5a1          75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGV----------PEFSP  144 (213)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC----------GGGCC
T ss_pred             ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchHHcc----------ccccc
Confidence            477999999888776665555555566899999999988888888776644 4666666654311          11257


Q ss_pred             CCEEEEcCCCC
Q 027248           90 IDVVVSNAAAN  100 (226)
Q Consensus        90 id~li~nag~~  100 (226)
                      +|.++.+++..
T Consensus       145 fD~I~~~~~~~  155 (213)
T d1dl5a1         145 YDVIFVTVGVD  155 (213)
T ss_dssp             EEEEEECSBBS
T ss_pred             hhhhhhhccHH
Confidence            99999888753

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=91.79  E-value=0.13  Score=35.82  Aligned_cols=42  Identities=19%  Similarity=0.239  Sum_probs=36.7

Q ss_pred             cccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcch
Q 027248            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN   48 (226)
Q Consensus         6 ~~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~   48 (226)
                      ++.-+.||+++|.| =|-+|+.+|+.|...|++|+++.+++-+
T Consensus        17 t~~~laGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DPi~   58 (163)
T d1v8ba1          17 TDFLISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPIC   58 (163)
T ss_dssp             HCCCCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHH
T ss_pred             hCceecCCEEEEec-ccccchhHHHHHHhCCCEEEEEecCchh
Confidence            35568999999997 4679999999999999999999998854

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=91.37  E-value=0.17  Score=36.87  Aligned_cols=105  Identities=10%  Similarity=0.036  Sum_probs=68.0

Q ss_pred             CCCEEEEEcCCC-chhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCC--cEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248           11 QGKVAIVTASTQ-GIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI--EVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus        11 ~gk~vlItGa~~-giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      .+.+||=.|++. .+...+++++...|++|+.++-+++-++.+.+.+.+.+.  .+.....|..+.+            +
T Consensus        39 ~~~~vLDlGCGtG~~~~~l~~~~~~~~~~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~d~~~~~------------~  106 (225)
T d1im8a_          39 ADSNVYDLGCSRGAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIAAYHSEIPVEILCNDIRHVE------------I  106 (225)
T ss_dssp             TTCEEEEESCTTCHHHHHHHHTCCCSSCEEEEECSCHHHHHHHHHHHHTSCCSSCEEEECSCTTTCC------------C
T ss_pred             CCCEEEEeccchhhHHHHHHHhhcCCCCceEEeCCCHHHHHHHHHHhHhhcccchhhhccchhhccc------------c
Confidence            567899999764 456677777667789999999999998888877765543  3445555554322            2


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEE
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLI  145 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~  145 (226)
                      +..|+++.+-....       .+.++...           +++.+...|+++|.+++.
T Consensus       107 ~~~d~i~~~~~l~~-------~~~~d~~~-----------~l~~i~~~LkpgG~li~~  146 (225)
T d1im8a_         107 KNASMVILNFTLQF-------LPPEDRIA-----------LLTKIYEGLNPNGVLVLS  146 (225)
T ss_dssp             CSEEEEEEESCGGG-------SCGGGHHH-----------HHHHHHHHEEEEEEEEEE
T ss_pred             ccceeeEEeeeccc-------cChhhHHH-----------HHHHHHHhCCCCceeecc
Confidence            35677766544322       22233332           355666677778877764

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=91.26  E-value=0.12  Score=37.71  Aligned_cols=35  Identities=20%  Similarity=0.372  Sum_probs=30.4

Q ss_pred             CCEEEEEcCCCchhHH-----HHHHHHhCCCeEEEEecCc
Q 027248           12 GKVAIVTASTQGIGFG-----IAERLGLEGASVVVSSRKQ   46 (226)
Q Consensus        12 gk~vlItGa~~giG~a-----~~~~l~~~g~~v~~~~r~~   46 (226)
                      ||+|.|+|+-||.|+.     ++..|++.|.+|.+++-+.
T Consensus         2 ~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D~   41 (237)
T d1g3qa_           2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDL   41 (237)
T ss_dssp             CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred             CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            6899999999999986     6777888999999999663

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=91.26  E-value=0.17  Score=32.84  Aligned_cols=35  Identities=20%  Similarity=0.232  Sum_probs=30.3

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcc
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK   47 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~   47 (226)
                      .|.++|.| +|-+|.++|..|.+.|.+|.++.+.+.
T Consensus        21 p~~vvIiG-gG~~G~E~A~~l~~~g~~Vtlve~~~~   55 (115)
T d1lvla2          21 PQHLVVVG-GGYIGLELGIAYRKLGAQVSVVEARER   55 (115)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEEC-CCHHHHHHHHHHhhcccceEEEeeecc
Confidence            57888776 579999999999999999999998764

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=91.25  E-value=0.1  Score=39.00  Aligned_cols=31  Identities=26%  Similarity=0.188  Sum_probs=27.2

Q ss_pred             EEEEcCCCchhHHHHHHHHhCCCeEEEEecCc
Q 027248           15 AIVTASTQGIGFGIAERLGLEGASVVVSSRKQ   46 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~   46 (226)
                      |+|+| +|-.|.++|.+|+++|.+|++++++.
T Consensus         7 vvIIG-aGi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIG-GGIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            67776 46889999999999999999999975

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=91.18  E-value=0.33  Score=36.79  Aligned_cols=112  Identities=16%  Similarity=0.049  Sum_probs=64.1

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCc-----EEEEEeeCCCHHHHHHHHHHHHH
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIE-----VIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~-----~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      .+++||=.|++.|.   ++..|+++|++|+.++.+++-++.+.+.....+..     ..+..+|....+.      . ..
T Consensus        56 ~~~~vLD~GcG~G~---~~~~la~~g~~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~-~~  125 (292)
T d1xvaa_          56 GCHRVLDVACGTGV---DSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDK------D-VP  125 (292)
T ss_dssp             TCCEEEESSCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHH------H-SC
T ss_pred             CCCEEEEecCCCcH---HHHHHHHcCCeeeeccCchHHHHHHHHHHHhcccccccceeeeeecccccccc------c-cC
Confidence            36789999987765   46667788999999999999888777666554332     2233333322221      0 00


Q ss_pred             HhCCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEE
Q 027248           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVL  144 (226)
Q Consensus        86 ~~~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~  144 (226)
                      ..+..|.+++...... .-+....+.++...           +++.+...|+++|.+|+
T Consensus       126 ~~~~fd~v~~~~~~~~-~~~~~~~~~~~~~~-----------~l~~~~~~LkpgG~li~  172 (292)
T d1xvaa_         126 AGDGFDAVICLGNSFA-HLPDSKGDQSEHRL-----------ALKNIASMVRPGGLLVI  172 (292)
T ss_dssp             CTTCEEEEEECSSCGG-GSCCTTSSSHHHHH-----------HHHHHHHTEEEEEEEEE
T ss_pred             CCCCceEEEEecCchh-hcCCcccChHHHHH-----------HHHHHHHHcCcCcEEEE
Confidence            1246888886543321 11111112233322           35666677777787665

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.16  E-value=0.056  Score=45.31  Aligned_cols=35  Identities=17%  Similarity=0.234  Sum_probs=29.3

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecC
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRK   45 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~   45 (226)
                      +++.+|+|.|+ ||+|.++++.|+..|. ++.+++.+
T Consensus        23 L~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d   58 (529)
T d1yova1          23 LESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGN   58 (529)
T ss_dssp             HHHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCS
T ss_pred             HhCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCC
Confidence            44578999986 7999999999999996 58888765

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=91.08  E-value=0.14  Score=38.27  Aligned_cols=36  Identities=25%  Similarity=0.259  Sum_probs=31.8

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEec
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSR   44 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r   44 (226)
                      .+++||+++|-| .|.+|..+++.|.+.|++|+.++-
T Consensus        27 ~~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD   62 (242)
T d1v9la1          27 GGIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSD   62 (242)
T ss_dssp             SCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEEC
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEeec
Confidence            478999999996 889999999999999999876654

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=91.01  E-value=0.11  Score=36.60  Aligned_cols=35  Identities=11%  Similarity=0.088  Sum_probs=29.7

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCe-EEEEecCcc
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQK   47 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~-v~~~~r~~~   47 (226)
                      +|+|+|.|| |-.|...|..|+++|++ |.++.|+..
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            588899985 57899999999999985 989888753

>d1m1na_ c.92.2.3 (A:) Nitrogenase iron-molybdenum protein, alpha chain {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: Chelatase-like
superfamily: "Helical backbone" metal receptor
family: Nitrogenase iron-molybdenum protein
domain: Nitrogenase iron-molybdenum protein, alpha chain
species: Azotobacter vinelandii [TaxId: 354]

Probab=90.97  E-value=0.43  Score=39.11  Aligned_cols=80  Identities=16%  Similarity=0.144  Sum_probs=53.0

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      ..+.||++.|.|+ +....++++.|.+.|++|+.++......+.........+....  ..|-.+..++++.+++.    
T Consensus       341 ~~l~Gkrv~i~~~-~~~~~~l~~~l~elGmevv~~~~~~~~~~d~~~~~~~~~~~~~--i~~d~~~~el~~~i~~~----  413 (477)
T d1m1na_         341 PRLEGKRVMLYIG-GLRPRHVIGAYEDLGMEVVGTGYEFAHNDDYDRTMKEMGDSTL--LYDDVTGYEFEEFVKRI----  413 (477)
T ss_dssp             HHHTTCEEEECBS-SSHHHHTHHHHHTTTCEEEEEEESSCCHHHHHTTTTTSCTTCE--EEESCBHHHHHHHHHHH----
T ss_pred             HhhcCCcEEEecC-chhHHHHHHHHHHCCCEEEEEeecCCChHHHHHHHHhcCCCcE--EecCCCHHHHHHHHHhc----
Confidence            4578999999876 4688999999999999988877654433222222212222222  24666777777777755    


Q ss_pred             CCCCEEEE
Q 027248           88 GKIDVVVS   95 (226)
Q Consensus        88 ~~id~li~   95 (226)
                       ++|+++-
T Consensus       414 -~pDL~ig  420 (477)
T d1m1na_         414 -KPDLIGS  420 (477)
T ss_dssp             -CCSEEEE
T ss_pred             -CCCEEEE
Confidence             8999983

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=90.96  E-value=0.84  Score=30.89  Aligned_cols=77  Identities=13%  Similarity=0.140  Sum_probs=53.0

Q ss_pred             ccCCCEEEEEcCCCc-hhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhcC--CcEEEEEeeCCCHHHHHHHHHHHH
Q 027248            9 RFQGKVAIVTASTQG-IGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARG--IEVIGVVCHVSNGQQRKNLINQTI   84 (226)
Q Consensus         9 ~~~gk~vlItGa~~g-iG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~   84 (226)
                      +++|+++|=.|+++| +|.    +.+++|+ +|+.++.+++..+...+.+...+  .++.+++.|...      +++   
T Consensus        12 ~~~g~~vlDl~~GtG~~~i----ea~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D~~~------~l~---   78 (152)
T d2esra1          12 YFNGGRVLDLFAGSGGLAI----EAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAER------AID---   78 (152)
T ss_dssp             CCCSCEEEEETCTTCHHHH----HHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHH------HHH---
T ss_pred             hCCCCeEEEcCCccCHHHH----HHHHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhcccccc------ccc---
Confidence            578999987776544 555    4456786 69999999988887777666554  347788777422      222   


Q ss_pred             HHhCCCCEEEEcCC
Q 027248           85 EKFGKIDVVVSNAA   98 (226)
Q Consensus        85 ~~~~~id~li~nag   98 (226)
                      ...++.|+++.++.
T Consensus        79 ~~~~~fDiIf~DPP   92 (152)
T d2esra1          79 CLTGRFDLVFLDPP   92 (152)
T ss_dssp             HBCSCEEEEEECCS
T ss_pred             ccccccceeEechh
Confidence            22358999987764

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=90.88  E-value=0.48  Score=31.42  Aligned_cols=91  Identities=22%  Similarity=0.185  Sum_probs=57.1

Q ss_pred             cccccCCCEEEEEcCC---CchhHHHHHHHHhCC-CeEEEEecCcchHHH--HHHHHHhc--CCcEEEEEeeCCCHHHHH
Q 027248            6 MAKRFQGKVAIVTAST---QGIGFGIAERLGLEG-ASVVVSSRKQKNVDE--AVVKLKAR--GIEVIGVVCHVSNGQQRK   77 (226)
Q Consensus         6 ~~~~~~gk~vlItGa~---~giG~a~~~~l~~~g-~~v~~~~r~~~~~~~--~~~~~~~~--~~~~~~~~~Dv~~~~~v~   77 (226)
                      |+.-|..|+|.|.|+|   +..|..+.+.|.+.| .+|+.+..+.+....  ....+.+-  ..+..+   =...++.+.
T Consensus         2 L~~lf~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i~G~~~y~sl~dlp~~vDlvv---i~vp~~~~~   78 (129)
T d2csua1           2 LDYFFNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEVQGVKAYKSVKDIPDEIDLAI---IVVPKRFVK   78 (129)
T ss_dssp             CCTTTSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEETTEECBSSTTSCSSCCSEEE---ECSCHHHHH
T ss_pred             hhHhCCCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCccccCCeEeecchhhcCCCCceEE---EecChHHhH
Confidence            4455788999999998   889999999988766 578887766543211  01111111  122222   245678888


Q ss_pred             HHHHHHHHHhCCCCEEEEcCCCC
Q 027248           78 NLINQTIEKFGKIDVVVSNAAAN  100 (226)
Q Consensus        78 ~~~~~~~~~~~~id~li~nag~~  100 (226)
                      +++++..+. |.--+++..+|+.
T Consensus        79 ~~~~~~~~~-g~~~~vi~s~Gf~  100 (129)
T d2csua1          79 DTLIQCGEK-GVKGVVIITAGFG  100 (129)
T ss_dssp             HHHHHHHHH-TCCEEEECCCSST
T ss_pred             HHHHHHHHc-CCCEEEEeccccc
Confidence            888888876 2333555566654

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=90.74  E-value=1.7  Score=29.99  Aligned_cols=75  Identities=15%  Similarity=0.145  Sum_probs=44.2

Q ss_pred             EEEEEcCCCchhHH--HHHHHHhC----CCeEEEEecCcchHHHHHHHHHh----cCCcEEEEEeeCCCHHHHHHHHHHH
Q 027248           14 VAIVTASTQGIGFG--IAERLGLE----GASVVVSSRKQKNVDEAVVKLKA----RGIEVIGVVCHVSNGQQRKNLINQT   83 (226)
Q Consensus        14 ~vlItGa~~giG~a--~~~~l~~~----g~~v~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~~~~~   83 (226)
                      .+.|.|| |.+|..  +...++..    +.++++.++++++++.....+.+    .+....+...  +|.++   .    
T Consensus         4 KI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~--td~~e---a----   73 (171)
T d1obba1           4 KIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKT--MNLDD---V----   73 (171)
T ss_dssp             EEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEE--SCHHH---H----
T ss_pred             EEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEe--CChhh---c----
Confidence            3778886 666654  44445543    35899999999887654433332    2333333222  22222   2    


Q ss_pred             HHHhCCCCEEEEcCCCCC
Q 027248           84 IEKFGKIDVVVSNAAANP  101 (226)
Q Consensus        84 ~~~~~~id~li~nag~~~  101 (226)
                         +...|++|+.++...
T Consensus        74 ---L~dad~Vv~~~~~g~   88 (171)
T d1obba1          74 ---IIDADFVINTAMVGG   88 (171)
T ss_dssp             ---HTTCSEEEECCCTTH
T ss_pred             ---ccCCCeEeeeccccc
Confidence               348999999998753

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=90.71  E-value=0.4  Score=31.03  Aligned_cols=35  Identities=11%  Similarity=0.108  Sum_probs=27.7

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHh---CCCeEEEEecCcc
Q 027248           12 GKVAIVTASTQGIGFGIAERLGL---EGASVVVSSRKQK   47 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~---~g~~v~~~~r~~~   47 (226)
                      +|.++|.|| |.+|.++|..|.+   +|.+|.++.|.+.
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~~   57 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGEM   57 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccch
Confidence            588999987 8999999976655   4567999988664

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=90.64  E-value=0.12  Score=35.64  Aligned_cols=35  Identities=17%  Similarity=0.213  Sum_probs=29.2

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCC--eEEEEecCc
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQ   46 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~--~v~~~~r~~   46 (226)
                      +||+|+|.||+ -.|..++..|.+.+.  +|+++.+++
T Consensus         1 ~gkrivIvGgG-~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGGG-TGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECCS-HHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECcc-HHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            58999999874 668999999999884  688888775

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.62  E-value=0.14  Score=36.89  Aligned_cols=31  Identities=19%  Similarity=0.218  Sum_probs=26.8

Q ss_pred             EEEEcCCCchhHHHHHHHHhCCCeEEEEecCc
Q 027248           15 AIVTASTQGIGFGIAERLGLEGASVVVSSRKQ   46 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~   46 (226)
                      |+|.| +|--|...|..|+++|.+|.++.++.
T Consensus         8 viViG-aG~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLG-TGITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            78887 45668999999999999999999975

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=90.52  E-value=0.1  Score=39.65  Aligned_cols=35  Identities=20%  Similarity=0.201  Sum_probs=29.8

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCc
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ   46 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~   46 (226)
                      ..|.|+|+||+ --|...|..|+++|++|.++.+++
T Consensus        29 ~pkkV~IIGaG-~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          29 NPKHVVIVGAG-MAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             SCCEEEEECCB-HHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCeEEEECCC-HHHHHHHHHHHHCCCCEEEEeCCC
Confidence            45889999875 448899999999999999999865

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=90.47  E-value=0.21  Score=35.40  Aligned_cols=38  Identities=18%  Similarity=0.183  Sum_probs=32.4

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcc
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK   47 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~   47 (226)
                      ..++|.|+|.|| |--|.+.|..|+++|++|.+..+++.
T Consensus        40 ~~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~~   77 (179)
T d1ps9a3          40 AVQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHSE   77 (179)
T ss_dssp             CSSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccCc
Confidence            346799999986 46689999999999999999999764

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=90.05  E-value=0.22  Score=36.56  Aligned_cols=37  Identities=22%  Similarity=0.098  Sum_probs=30.2

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcc
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK   47 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~   47 (226)
                      .+.++|+|.||+ --|..+|..|+++|.+|+++.|+++
T Consensus         2 ~~~~kV~IiGaG-~aGl~~A~~L~~~G~~v~v~Er~~~   38 (265)
T d2voua1           2 PTTDRIAVVGGS-ISGLTAALMLRDAGVDVDVYERSPQ   38 (265)
T ss_dssp             CCCSEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCCCcEEEECcC-HHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            356789999864 5578888899999999999998754

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=90.03  E-value=1.5  Score=28.25  Aligned_cols=84  Identities=11%  Similarity=0.086  Sum_probs=52.9

Q ss_pred             CEEEEEcCC---CchhHHHHHHHHhCCCeEEEEecCcchHHH--HHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248           13 KVAIVTAST---QGIGFGIAERLGLEGASVVVSSRKQKNVDE--AVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus        13 k~vlItGa~---~giG~a~~~~l~~~g~~v~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      |++.|.|+|   +..|..+.+.|.+.|++|+.+..+.+....  ....+.+-...+.. ..=...++.+.+++++..+. 
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~i~G~~~y~sl~~lp~~~D~-vvi~vp~~~~~~~l~~~~~~-   79 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIEGLKCYRSVRELPKDVDV-IVFVVPPKVGLQVAKEAVEA-   79 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGSCTTCCE-EEECSCHHHHHHHHHHHHHT-
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccccccccCccccccchhccccceE-EEEEeCHHHHHHHHHHHHhc-
Confidence            789999998   568999999999999998887655433211  01111111111111 11245677788888888775 


Q ss_pred             CCCCEEEEcCCC
Q 027248           88 GKIDVVVSNAAA   99 (226)
Q Consensus        88 ~~id~li~nag~   99 (226)
                       .+..++...|.
T Consensus        80 -g~k~v~~~~g~   90 (116)
T d1y81a1          80 -GFKKLWFQPGA   90 (116)
T ss_dssp             -TCCEEEECTTS
T ss_pred             -CCceEEeccch
Confidence             45566666654

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.01  E-value=0.5  Score=34.47  Aligned_cols=80  Identities=23%  Similarity=0.132  Sum_probs=59.7

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcC------CcEEEEEeeCCCHHHHHHHHHHHH
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG------IEVIGVVCHVSNGQQRKNLINQTI   84 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~Dv~~~~~v~~~~~~~~   84 (226)
                      .|.+||-.|+++|--.++.-++.....+|+.++++++-++.+.+.+.+.+      .++.+...|..+..          
T Consensus        76 ~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~~----------  145 (224)
T d1i1na_          76 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGY----------  145 (224)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCC----------
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeeccccc----------
Confidence            47799999999998888888888878899999999988887777665432      35666667754211          


Q ss_pred             HHhCCCCEEEEcCCCC
Q 027248           85 EKFGKIDVVVSNAAAN  100 (226)
Q Consensus        85 ~~~~~id~li~nag~~  100 (226)
                      ...+.+|.++.+++..
T Consensus       146 ~~~~~fD~I~~~~~~~  161 (224)
T d1i1na_         146 AEEAPYDAIHVGAAAP  161 (224)
T ss_dssp             GGGCCEEEEEECSBBS
T ss_pred             chhhhhhhhhhhcchh
Confidence            1134799999888764

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=89.95  E-value=0.43  Score=35.83  Aligned_cols=103  Identities=12%  Similarity=-0.004  Sum_probs=67.4

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhC-CCeEEEEecCcchHHHHHHHHHhcC--CcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLE-GASVVVSSRKQKNVDEAVVKLKARG--IEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      .|.+||=.|++.|.   ++..|+++ |++|+.++-++..++.+.+.....+  .++.+..+|..+...          ..
T Consensus        67 ~~~~vLDiGcG~G~---~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~~l~~----------~~  133 (282)
T d2o57a1          67 RQAKGLDLGAGYGG---AARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPC----------ED  133 (282)
T ss_dssp             TTCEEEEETCTTSH---HHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSS----------CT
T ss_pred             CCCEEEEeCCCCcH---HHhhhhccCCcEEEEEeccchhhhhhhcccccccccccccccccccccccc----------cc
Confidence            57899999987552   34445543 8899999999888777766666553  468899999876421          12


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEe
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~s  146 (226)
                      +.+|+++..-.+..    +  .+.              -.+++.+...|+++|++++..
T Consensus       134 ~sfD~V~~~~~l~h----~--~d~--------------~~~l~~~~~~LkpgG~l~~~~  172 (282)
T d2o57a1         134 NSYDFIWSQDAFLH----S--PDK--------------LKVFQECARVLKPRGVMAITD  172 (282)
T ss_dssp             TCEEEEEEESCGGG----C--SCH--------------HHHHHHHHHHEEEEEEEEEEE
T ss_pred             cccchhhccchhhh----c--cCH--------------HHHHHHHHHhcCCCcEEEEEE
Confidence            47999987654322    1  111              123566677777788877654

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=89.76  E-value=0.27  Score=36.38  Aligned_cols=36  Identities=19%  Similarity=0.075  Sum_probs=30.3

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHh-CCCeEEEEe
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGL-EGASVVVSS   43 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~-~g~~v~~~~   43 (226)
                      ..+++||+++|-| .|.+|+.+++.|.+ .|++|+.++
T Consensus        26 ~~~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vs   62 (234)
T d1b26a1          26 GIDPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVS   62 (234)
T ss_dssp             TCCTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             CCCcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEee
Confidence            3578999999886 88999999999975 599987665

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=89.76  E-value=0.27  Score=32.51  Aligned_cols=35  Identities=11%  Similarity=0.096  Sum_probs=30.8

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcc
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK   47 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~   47 (226)
                      .|.++|.|| |-||.++|..|.+.|.+|.++.+.+.
T Consensus        26 p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~~   60 (125)
T d1ojta2          26 PGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMDG   60 (125)
T ss_dssp             CSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeecc
Confidence            588888875 69999999999999999999988753

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=89.71  E-value=0.29  Score=32.67  Aligned_cols=37  Identities=14%  Similarity=0.091  Sum_probs=32.0

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcch
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN   48 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~   48 (226)
                      .+|+++|.| +|-+|.++|..|.+.|.+|.++.+.+.-
T Consensus        34 ~~k~v~VIG-gG~iG~E~A~~l~~~g~~Vtvie~~~~~   70 (133)
T d1q1ra2          34 ADNRLVVIG-GGYIGLEVAATAIKANMHVTLLDTAARV   70 (133)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred             cCCEEEEEC-CchHHHHHHHHHHhhCcceeeeeecccc
Confidence            468888886 5799999999999999999999997653

>d1t35a_ c.129.1.1 (A:) Hypothetical protein YvdD {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: MCP/YpsA-like
superfamily: MCP/YpsA-like
family: MoCo carrier protein-like
domain: Hypothetical protein YvdD
species: Bacillus subtilis [TaxId: 1423]

Probab=89.67  E-value=1.4  Score=30.85  Aligned_cols=87  Identities=10%  Similarity=0.017  Sum_probs=40.5

Q ss_pred             hHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHH-----------HHHHHHHHHHHhCCCCEE
Q 027248           25 GFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQ-----------RKNLINQTIEKFGKIDVV   93 (226)
Q Consensus        25 G~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-----------v~~~~~~~~~~~~~id~l   93 (226)
                      .+.+++.|++.|+.++.-+-..---....+...+.+.++..+....-...+           ++.+.++-......=|.+
T Consensus        22 a~~lg~~la~~g~~lv~GGG~~GlMga~a~ga~~~gg~v~gv~~~~l~~~~~~~~~~~~~~~~~~~~~Rk~~m~~~sdaf  101 (179)
T d1t35a_          22 AAELGVYMAEQGIGLVYGGSRVGLMGTIADAIMENGGTAIGVMPSGLFSGEVVHQNLTELIEVNGMHERKAKMSELADGF  101 (179)
T ss_dssp             HHHHHHHHHHTTCEEEECCCCSHHHHHHHHHHHTTTCCEEEEEETTCCHHHHTTCCCSEEEEESHHHHHHHHHHHHCSEE
T ss_pred             HHHHHHHHHHCCCeEEECCCchHHHHHHhcchhhcCCceeccccchhhccccccccceeeeeeccHHHHHHHHHHhcCeE
Confidence            445556666666665555544332233333334444444433332211111           122333322223356889


Q ss_pred             EEcCCCCCCCCccccccHHHHHHHHH
Q 027248           94 VSNAAANPSVDSILQTKESVLDKLWD  119 (226)
Q Consensus        94 i~nag~~~~~~~~~~~~~~~~~~~~~  119 (226)
                      |..+|..+        +.+++-+++.
T Consensus       102 I~lPGG~G--------TLdEl~e~l~  119 (179)
T d1t35a_         102 ISMPGGFG--------TYEELFEVLC  119 (179)
T ss_dssp             EECSCCHH--------HHHHHHHHHH
T ss_pred             EEecCccc--------hhhHHHHHHH
Confidence            98888754        3455555544

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=89.41  E-value=0.2  Score=36.65  Aligned_cols=36  Identities=14%  Similarity=0.113  Sum_probs=30.8

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCc
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ   46 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~   46 (226)
                      -.+|.++|.||+ --|...|.+|+++|++|.++.++.
T Consensus        47 ~~~k~VvIIGaG-pAGl~aA~~l~~~G~~v~l~E~~~   82 (233)
T d1djqa3          47 KNKDSVLIVGAG-PSGSEAARVLMESGYTVHLTDTAE   82 (233)
T ss_dssp             SSCCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cCCceEEEEccc-HHHHHHHHHHHHhccceeeEeecc
Confidence            467999999875 458999999999999999998875

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=89.37  E-value=0.19  Score=36.48  Aligned_cols=35  Identities=17%  Similarity=0.244  Sum_probs=30.2

Q ss_pred             CEEEEEcCCCchhHH-----HHHHHHhCCCeEEEEecCcc
Q 027248           13 KVAIVTASTQGIGFG-----IAERLGLEGASVVVSSRKQK   47 (226)
Q Consensus        13 k~vlItGa~~giG~a-----~~~~l~~~g~~v~~~~r~~~   47 (226)
                      |+|.|+++-||.|+.     +|..|+++|.+|.+++-+..
T Consensus         2 kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~~   41 (232)
T d1hyqa_           2 RTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADIT   41 (232)
T ss_dssp             EEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCCS
T ss_pred             EEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence            789999999999986     56778889999999988753

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=89.34  E-value=2.3  Score=29.25  Aligned_cols=75  Identities=4%  Similarity=-0.024  Sum_probs=42.2

Q ss_pred             EEEEcC-CCchhHHHHHHHHhCC----CeEEEEecCcch--HHHHHH---H-HHhcCCcEEEEEeeCCCHHHHHHHHHHH
Q 027248           15 AIVTAS-TQGIGFGIAERLGLEG----ASVVVSSRKQKN--VDEAVV---K-LKARGIEVIGVVCHVSNGQQRKNLINQT   83 (226)
Q Consensus        15 vlItGa-~~giG~a~~~~l~~~g----~~v~~~~r~~~~--~~~~~~---~-~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   83 (226)
                      +.|.|| +.|.+.+++.-+....    -++++.+.+++.  ++....   . +...+.+..+.  .-+|..+        
T Consensus         4 I~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~--~~td~~~--------   73 (169)
T d1s6ya1           4 IATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIH--LTLDRRR--------   73 (169)
T ss_dssp             EEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEE--EESCHHH--------
T ss_pred             EEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceee--ecCCchh--------
Confidence            677886 4566666666555432    379999998865  222211   1 12223333322  3344322        


Q ss_pred             HHHhCCCCEEEEcCCCCC
Q 027248           84 IEKFGKIDVVVSNAAANP  101 (226)
Q Consensus        84 ~~~~~~id~li~nag~~~  101 (226)
                        ....-|++|+.+|...
T Consensus        74 --al~gaDvVv~ta~~~~   89 (169)
T d1s6ya1          74 --ALDGADFVTTQFRVGG   89 (169)
T ss_dssp             --HHTTCSEEEECCCTTH
T ss_pred             --hcCCCCEEEEccccCC
Confidence              1237899999999754

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=89.29  E-value=0.57  Score=34.27  Aligned_cols=76  Identities=18%  Similarity=0.029  Sum_probs=53.0

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      .|.+||-.|+++|---+   .|++.+.+|+.+.++++..+.+.+.+. ...++.++..|...--          ...+++
T Consensus        70 ~g~~VLdIG~GsGy~ta---~La~l~~~V~aiE~~~~~~~~A~~~~~-~~~nv~~~~~d~~~g~----------~~~~pf  135 (224)
T d1vbfa_          70 KGQKVLEIGTGIGYYTA---LIAEIVDKVVSVEINEKMYNYASKLLS-YYNNIKLILGDGTLGY----------EEEKPY  135 (224)
T ss_dssp             TTCEEEEECCTTSHHHH---HHHHHSSEEEEEESCHHHHHHHHHHHT-TCSSEEEEESCGGGCC----------GGGCCE
T ss_pred             ccceEEEecCCCCHHHH---HHHHHhcccccccccHHHHHHHHHHHh-cccccccccCchhhcc----------hhhhhH
Confidence            47789999998885444   455556789999999887776655443 4567888888875411          113579


Q ss_pred             CEEEEcCCCC
Q 027248           91 DVVVSNAAAN  100 (226)
Q Consensus        91 d~li~nag~~  100 (226)
                      |.++.+++..
T Consensus       136 D~Iiv~~a~~  145 (224)
T d1vbfa_         136 DRVVVWATAP  145 (224)
T ss_dssp             EEEEESSBBS
T ss_pred             HHHHhhcchh
Confidence            9999888753

>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermus thermophilus [TaxId: 274]

Probab=89.03  E-value=0.78  Score=32.33  Aligned_cols=75  Identities=12%  Similarity=0.049  Sum_probs=49.6

Q ss_pred             EcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCEEEEcC
Q 027248           18 TASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNA   97 (226)
Q Consensus        18 tGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~li~na   97 (226)
                      .-+|-|-|-. .+.+++++.+|+.++|+++.+......   ....+.++..+.++.+.   .+...  ..+.+|.++..-
T Consensus        23 vD~T~G~GGh-s~~iL~~~~~viaiD~D~~ai~~a~~~---~~~~~~~~~~~f~~~~~---~l~~~--~~~~vdgIl~DL   93 (182)
T d1wg8a2          23 VDATLGGAGH-ARGILERGGRVIGLDQDPEAVARAKGL---HLPGLTVVQGNFRHLKR---HLAAL--GVERVDGILADL   93 (182)
T ss_dssp             EETTCTTSHH-HHHHHHTTCEEEEEESCHHHHHHHHHT---CCTTEEEEESCGGGHHH---HHHHT--TCSCEEEEEEEC
T ss_pred             EEeCCCCcHH-HHHHhcccCcEEEEhhhhhHHHHHhhc---cccceeEeehHHHHHHH---HHHHc--CCCccCEEEEEc
Confidence            3455555554 456666778999999999877655432   24467888888776443   22222  135899999999


Q ss_pred             CCCC
Q 027248           98 AANP  101 (226)
Q Consensus        98 g~~~  101 (226)
                      |+..
T Consensus        94 GvSs   97 (182)
T d1wg8a2          94 GVSS   97 (182)
T ss_dssp             SCCH
T ss_pred             cCCH
Confidence            9864

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=88.82  E-value=0.18  Score=37.70  Aligned_cols=34  Identities=21%  Similarity=0.303  Sum_probs=28.9

Q ss_pred             CEEEEEcCCCchhHHH-----HHHHHhCCCeEEEEecCcc
Q 027248           13 KVAIVTASTQGIGFGI-----AERLGLEGASVVVSSRKQK   47 (226)
Q Consensus        13 k~vlItGa~~giG~a~-----~~~l~~~g~~v~~~~r~~~   47 (226)
                      |+|.|+| -||+|+..     +..|++.|.+|.++|-+++
T Consensus         2 r~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~q   40 (269)
T d1cp2a_           2 RQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPK   40 (269)
T ss_dssp             EEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTT
T ss_pred             CEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCCC
Confidence            6788898 99999874     5588999999999999864

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=88.82  E-value=0.76  Score=35.20  Aligned_cols=76  Identities=25%  Similarity=0.227  Sum_probs=51.8

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      .++||+||-.|++.|+   ++..+++.|+ +|+.++.++. ...+.+.....  ..++.++..|+.+.+.          
T Consensus        31 ~~~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~~-~~~a~~~~~~n~~~~~v~~~~~~~~~~~~----------   96 (316)
T d1oria_          31 LFKDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSSI-SDYAVKIVKANKLDHVVTIIKGKVEEVEL----------   96 (316)
T ss_dssp             HHTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECSTT-HHHHHHHHHHTTCTTTEEEEESCTTTCCC----------
T ss_pred             cCCcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcHH-HhhhhhHHHHhCCccccceEeccHHHccc----------
Confidence            4689999999998875   4566777886 5999998764 44444433333  3458888888877532          


Q ss_pred             HhCCCCEEEEcCC
Q 027248           86 KFGKIDVVVSNAA   98 (226)
Q Consensus        86 ~~~~id~li~nag   98 (226)
                      ..+++|+++...-
T Consensus        97 ~~~~~D~ivs~~~  109 (316)
T d1oria_          97 PVEKVDIIISEWM  109 (316)
T ss_dssp             SSSCEEEEEECCC
T ss_pred             ccceeEEEeeeee
Confidence            1247999987643

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=88.67  E-value=0.12  Score=36.16  Aligned_cols=80  Identities=9%  Similarity=0.094  Sum_probs=52.1

Q ss_pred             EEEEEcCCCchhHHHHHHHHhC-CCeEE-EEecCcch-HHHHH-----------------HHHHhcCCcEEEEEeeCCCH
Q 027248           14 VAIVTASTQGIGFGIAERLGLE-GASVV-VSSRKQKN-VDEAV-----------------VKLKARGIEVIGVVCHVSNG   73 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~-g~~v~-~~~r~~~~-~~~~~-----------------~~~~~~~~~~~~~~~Dv~~~   73 (226)
                      ++.|.|++|-+|+++++...+. +++++ .++|.... ...-.                 ++.. ...+   +..|++.+
T Consensus         6 kI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~-~~~D---ViIDFs~p   81 (162)
T d1diha1           6 RVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVK-DDFD---VFIDFTRP   81 (162)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTT-TSCS---EEEECSCH
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeeccHHHHh-cccc---eEEEeccH
Confidence            4899999999999999999876 56643 44443211 00000                 0000 0122   34699999


Q ss_pred             HHHHHHHHHHHHHhCCCCEEEEcCCC
Q 027248           74 QQRKNLINQTIEKFGKIDVVVSNAAA   99 (226)
Q Consensus        74 ~~v~~~~~~~~~~~~~id~li~nag~   99 (226)
                      +.....++...+.  ++.+|+-..|+
T Consensus        82 ~~~~~~~~~a~~~--~~~~ViGTTG~  105 (162)
T d1diha1          82 EGTLNHLAFCRQH--GKGMVIGTTGF  105 (162)
T ss_dssp             HHHHHHHHHHHHT--TCEEEECCCCC
T ss_pred             HHHHHHHHHHHhc--cceeEEecCCC
Confidence            9999998877765  77788866664

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=88.37  E-value=0.42  Score=35.40  Aligned_cols=35  Identities=23%  Similarity=0.323  Sum_probs=28.9

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHh-CCCeEEEEec
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGL-EGASVVVSSR   44 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~-~g~~v~~~~r   44 (226)
                      +++||+++|-|- |.+|..+++.|.+ .|++|+.+.-
T Consensus        29 ~l~g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~vsD   64 (239)
T d1gtma1          29 TLKGKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAVSD   64 (239)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHhcCcceeeccc
Confidence            589999999986 6699999999986 4898776554

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=88.35  E-value=0.26  Score=37.63  Aligned_cols=34  Identities=26%  Similarity=0.334  Sum_probs=24.0

Q ss_pred             CEEEEEcCCCc--h--hHHHHHHHHhCCCeEEEEecCc
Q 027248           13 KVAIVTASTQG--I--GFGIAERLGLEGASVVVSSRKQ   46 (226)
Q Consensus        13 k~vlItGa~~g--i--G~a~~~~l~~~g~~v~~~~r~~   46 (226)
                      |+|+|++|+.|  +  ..+++++|.++|++|.+++...
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~~   38 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTAD   38 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeCC
Confidence            55666665433  2  3469999999999998877543

>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Pyranose 2-oxidase
species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]

Probab=88.19  E-value=0.18  Score=39.08  Aligned_cols=29  Identities=21%  Similarity=0.135  Sum_probs=25.2

Q ss_pred             EEEEcCCCchhHHHHHHHHhCCCeEEEEec
Q 027248           15 AIVTASTQGIGFGIAERLGLEGASVVVSSR   44 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g~~v~~~~r   44 (226)
                      ++|.|++-+ |..+|.+|++.|.+|+++.+
T Consensus         7 viIVGsG~a-G~v~A~~La~~G~kVlvLEa   35 (379)
T d2f5va1           7 VVIVGSGPI-GCTYARELVGAGYKVAMFDI   35 (379)
T ss_dssp             EEEECCSHH-HHHHHHHHHHTTCEEEEECS
T ss_pred             EEEECcCHH-HHHHHHHHhhCCCeEEEEec
Confidence            788887655 89999999999999999876

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=88.08  E-value=0.88  Score=31.27  Aligned_cols=73  Identities=8%  Similarity=-0.143  Sum_probs=39.9

Q ss_pred             EEEEcCCCchhHHHHHH-HHh-C----CCeEEEEecCcchHHHHHHHHHhc-CCcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248           15 AIVTASTQGIGFGIAER-LGL-E----GASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus        15 vlItGa~~giG~a~~~~-l~~-~----g~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      +.|.||++ +|...+-. +++ .    +.++++.+.++++++......... .....+ ..- ++.+   +.       .
T Consensus         3 IaiIGaGs-~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~-~~t-~~~~---~~-------l   69 (162)
T d1up7a1           3 IAVIGGGS-SYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKV-LIS-DTFE---GA-------V   69 (162)
T ss_dssp             EEEETTTC-TTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEE-EEC-SSHH---HH-------H
T ss_pred             EEEECCCH-HHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceE-EEe-cCcc---cc-------c
Confidence            77888854 66554432 222 1    357999999998876443222211 111111 111 2222   11       2


Q ss_pred             CCCCEEEEcCCCC
Q 027248           88 GKIDVVVSNAAAN  100 (226)
Q Consensus        88 ~~id~li~nag~~  100 (226)
                      ..-|++|..+|..
T Consensus        70 ~~aDvVVita~~~   82 (162)
T d1up7a1          70 VDAKYVIFQFRPG   82 (162)
T ss_dssp             TTCSEEEECCCTT
T ss_pred             CCCCEEEEecccC
Confidence            4789999999874

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=88.03  E-value=0.33  Score=37.33  Aligned_cols=36  Identities=17%  Similarity=0.254  Sum_probs=29.2

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcc
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK   47 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~   47 (226)
                      +.|.|+|.||+ --|..+|..|++.|++|.++.++..
T Consensus         1 k~KKI~IIGaG-~sGL~aA~~L~k~G~~V~viEk~~~   36 (314)
T d2bi7a1           1 KSKKILIVGAG-FSGAVIGRQLAEKGHQVHIIDQRDH   36 (314)
T ss_dssp             CCCEEEEECCS-HHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHhCCCCEEEEECCCC
Confidence            46889999864 4578888999999999999888763

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=87.58  E-value=2  Score=28.25  Aligned_cols=77  Identities=13%  Similarity=0.130  Sum_probs=50.1

Q ss_pred             CCCEEEEEcCC-Cch---------hHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHH
Q 027248           11 QGKVAIVTAST-QGI---------GFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLI   80 (226)
Q Consensus        11 ~gk~vlItGa~-~gi---------G~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   80 (226)
                      .-|.++|.|++ --|         +...++.|.+.|++++++..|++....-...    . +  -+...=-..+.+.+.+
T Consensus         6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d~----a-D--~lYfePlt~e~v~~Ii   78 (127)
T d1a9xa3           6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPEM----A-D--ATYIEPIHWEVVRKII   78 (127)
T ss_dssp             SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGGG----S-S--EEECSCCCHHHHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChhh----c-c--eeeeecCCHHHHHHHH
Confidence            45889999985 333         5678889999999999999999875332110    1 1  1222334455555555


Q ss_pred             HHHHHHhCCCCEEEEcCCC
Q 027248           81 NQTIEKFGKIDVVVSNAAA   99 (226)
Q Consensus        81 ~~~~~~~~~id~li~nag~   99 (226)
                      ++     +++|.++-..|.
T Consensus        79 ~~-----E~pd~il~~~GG   92 (127)
T d1a9xa3          79 EK-----ERPDAVLPTMGG   92 (127)
T ss_dssp             HH-----HCCSEEECSSSH
T ss_pred             HH-----hCcCCeEEEeee
Confidence            53     399999866664

>d1ydhb_ c.129.1.1 (B:) Hypothetical protein At5g11950 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: MCP/YpsA-like
superfamily: MCP/YpsA-like
family: MoCo carrier protein-like
domain: Hypothetical protein At5g11950
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=87.54  E-value=1.8  Score=30.34  Aligned_cols=25  Identities=4%  Similarity=0.009  Sum_probs=16.2

Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHH
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDIN  121 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N  121 (226)
                      .=|.+|.-+|..+        +.+++-+++..+
T Consensus        98 ~sdafIvlPGG~G--------TLdEl~e~l~l~  122 (181)
T d1ydhb_          98 EAEAFIALPGGYG--------TMEELLEMITWS  122 (181)
T ss_dssp             HCSEEEECSCSHH--------HHHHHHHHHHHH
T ss_pred             hCeeEEEeCCccc--------hHHHHHHHHHHH
Confidence            5689998888754        355655555443

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=87.10  E-value=0.32  Score=35.48  Aligned_cols=33  Identities=27%  Similarity=0.246  Sum_probs=27.8

Q ss_pred             EEEEcCCCchhHHHHHHHHhCCCeEEEEecCcch
Q 027248           15 AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN   48 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~   48 (226)
                      |+|.||+ --|...|..|+++|.+|+++.+++.-
T Consensus         5 ViIIGaG-~aGl~aA~~la~~G~~V~liEk~~~~   37 (251)
T d2i0za1           5 VIVIGGG-PSGLMAAIGAAEEGANVLLLDKGNKL   37 (251)
T ss_dssp             EEEECCS-HHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred             EEEECcC-HHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence            7788765 56888999999999999999987653

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=86.90  E-value=0.55  Score=31.41  Aligned_cols=87  Identities=13%  Similarity=0.019  Sum_probs=53.3

Q ss_pred             CCCEEEEEcCC---CchhHHHHHHHHhCCCeEEEEecCcc--hHHH--HHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHH
Q 027248           11 QGKVAIVTAST---QGIGFGIAERLGLEGASVVVSSRKQK--NVDE--AVVKLKARGIEVIGVVCHVSNGQQRKNLINQT   83 (226)
Q Consensus        11 ~gk~vlItGa~---~giG~a~~~~l~~~g~~v~~~~r~~~--~~~~--~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   83 (226)
                      +.|++.|.|+|   +..|..+.+.|.+.|++++.+.-++.  ....  ....+.+....+.. ..=...++.+..++++.
T Consensus        12 ~pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~~~~~~i~g~~~~~~l~~i~~~iD~-v~v~~p~~~v~~~v~~~   90 (136)
T d1iuka_          12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGEELFGEEAVASLLDLKEPVDI-LDVFRPPSALMDHLPEV   90 (136)
T ss_dssp             HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTTSEETTEECBSSGGGCCSCCSE-EEECSCHHHHTTTHHHH
T ss_pred             CCCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEeccccceeeceecccchhhccCCCce-EEEeccHHHHHHHHHHH
Confidence            57999999998   56899999999999999887765432  1100  00111111111111 11245577788888887


Q ss_pred             HHHhCCCCEEEEcCCCC
Q 027248           84 IEKFGKIDVVVSNAAAN  100 (226)
Q Consensus        84 ~~~~~~id~li~nag~~  100 (226)
                      .+.  .+..++...|..
T Consensus        91 ~~~--g~k~i~~q~G~~  105 (136)
T d1iuka_          91 LAL--RPGLVWLQSGIR  105 (136)
T ss_dssp             HHH--CCSCEEECTTCC
T ss_pred             Hhh--CCCeEEEecCcc
Confidence            766  455666667653

>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Sporulation response regulator Spo0F
species: Bacillus subtilis [TaxId: 1423]

Probab=86.61  E-value=2.7  Score=26.88  Aligned_cols=79  Identities=11%  Similarity=0.148  Sum_probs=53.7

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCH--HHHHHHHHHHHHHhCC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNG--QQRKNLINQTIEKFGK   89 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~--~~v~~~~~~~~~~~~~   89 (226)
                      +|+|+|.=-...+...+.+.|.+.|++|.....-.    ++.+.+.+..+++.++  |+.-+  +. -++++++++....
T Consensus         1 NkrILvVDD~~~~~~~l~~~L~~~g~~v~~a~~g~----eal~~~~~~~~dlill--D~~mP~~~G-~el~~~lr~~~~~   73 (119)
T d1peya_           1 NEKILIVDDQSGIRILLNEVFNKEGYQTFQAANGL----QALDIVTKERPDLVLL--DMKIPGMDG-IEILKRMKVIDEN   73 (119)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHH----HHHHHHHHHCCSEEEE--ESCCTTCCH-HHHHHHHHHHCTT
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCEEEEeCCHH----HHHHHHHhCCCCEEEE--eccCCCCCH-HHHHHHHHHhCCC
Confidence            58899999899999999999999999988655433    3334444445565554  65543  33 3567777776666


Q ss_pred             CCEEEEcC
Q 027248           90 IDVVVSNA   97 (226)
Q Consensus        90 id~li~na   97 (226)
                      +-+++..+
T Consensus        74 ~pvi~lt~   81 (119)
T d1peya_          74 IRVIIMTA   81 (119)
T ss_dssp             CEEEEEES
T ss_pred             CcEEEEec
Confidence            66776554

>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Adrenal gland protein AD-003 (C9orf32)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.55  E-value=0.44  Score=34.39  Aligned_cols=107  Identities=16%  Similarity=0.123  Sum_probs=67.0

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhC-CCeEEEEecCcchHHHHHHHHHhcCC-cEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLE-GASVVVSSRKQKNVDEAVVKLKARGI-EVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      .++++|=.|++.|.   ++..|++. +.+|..++-+++-++.+.+.+...+. ++.++.+|+.+...          ..+
T Consensus        60 ~~~~vLDiGcG~G~---~~~~l~~~~~~~v~~vD~s~~~l~~ak~~~~~~~~~~~~f~~~d~~~~~~----------~~~  126 (222)
T d2ex4a1          60 GTSCALDCGAGIGR---ITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTP----------EPD  126 (222)
T ss_dssp             CCSEEEEETCTTTH---HHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCC----------CSS
T ss_pred             CCCEEEEeccCCCH---hhHHHHHhcCCEEEEeecCHHHhhcccccccccccccccccccccccccc----------ccc
Confidence            45788989887664   44444444 45799999999888887776655443 46788888765421          124


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEecc
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~sS~  148 (226)
                      ..|+++....+..       ++.+++.+.           ++.+...++++|.+++....
T Consensus       127 ~fD~I~~~~~l~h-------~~~~~~~~~-----------l~~i~~~Lk~~G~~~i~~~~  168 (222)
T d2ex4a1         127 SYDVIWIQWVIGH-------LTDQHLAEF-----------LRRCKGSLRPNGIIVIKDNM  168 (222)
T ss_dssp             CEEEEEEESCGGG-------SCHHHHHHH-----------HHHHHHHEEEEEEEEEEEEE
T ss_pred             ccccccccccccc-------chhhhhhhH-----------HHHHHHhcCCcceEEEEEcc
Confidence            7899887654422       333333222           44555666677877765443

>d1trba2 c.3.1.5 (A:119-244) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=86.33  E-value=0.53  Score=30.99  Aligned_cols=38  Identities=13%  Similarity=0.083  Sum_probs=32.6

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcc
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK   47 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~   47 (226)
                      .++||.++|.|+ |.-+..-|..|.+...+|.++.|.++
T Consensus        24 ~~~~k~V~VvGg-GdsA~e~A~~L~~~a~~V~li~r~~~   61 (126)
T d1trba2          24 FYRNQKVAVIGG-GNTAVEEALYLSNIASEVHLIHRRDG   61 (126)
T ss_dssp             GGTTSEEEEECS-SHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred             HhCCCEEEEECC-CHHHHHHHHHHhhcCCcEEEEeeccc
Confidence            379999999998 67778888899998889999999764

>d1vdca2 c.3.1.5 (A:118-243) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=86.31  E-value=1.2  Score=29.47  Aligned_cols=38  Identities=21%  Similarity=0.202  Sum_probs=30.3

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcc
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK   47 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~   47 (226)
                      .|+||.++|.|+ |.=+..-|..|++.-.+|.++.|..+
T Consensus        31 ~frgk~V~VvGg-GdsA~e~A~~L~~~a~~V~li~r~~~   68 (130)
T d1vdca2          31 IFRNKPLAVIGG-GDSAMEEANFLTKYGSKVYIIHRRDA   68 (130)
T ss_dssp             GGTTSEEEEECC-SHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred             HhCCCEEEEEcC-chHHHHHHHHHhCCCCcEEEEEeccc
Confidence            478999999998 44556667778888888999988764

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=86.14  E-value=0.35  Score=33.40  Aligned_cols=32  Identities=13%  Similarity=0.081  Sum_probs=25.2

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEe
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSS   43 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~   43 (226)
                      +++.|+|.|| |.+|.+++..|.+.|.++.++.
T Consensus         2 ~~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~~   33 (185)
T d1q1ra1           2 ANDNVVIVGT-GLAGVEVAFGLRASGWEGNIRL   33 (185)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCCSEEEE
T ss_pred             CCCCEEEECC-cHHHHHHHHHHHHcCCceEEEE
Confidence            4678888874 6899999999999998754443

>d1qkia1 c.2.1.3 (A:12-199,A:435-449) Glucose 6-phosphate dehydrogenase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose 6-phosphate dehydrogenase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.90  E-value=0.37  Score=34.79  Aligned_cols=74  Identities=11%  Similarity=0.016  Sum_probs=48.9

Q ss_pred             CCEEEEEcCCCchhHH-HHHH---HHhC-----CCeEEEEecCcchHHHHHHHHH--------------hcCCcEEEEEe
Q 027248           12 GKVAIVTASTQGIGFG-IAER---LGLE-----GASVVVSSRKQKNVDEAVVKLK--------------ARGIEVIGVVC   68 (226)
Q Consensus        12 gk~vlItGa~~giG~a-~~~~---l~~~-----g~~v~~~~r~~~~~~~~~~~~~--------------~~~~~~~~~~~   68 (226)
                      .-++||.||||.+.+. +--.   |...     +.+++.++|++-..++..+.+.              .....+.++.+
T Consensus        20 ~~t~VIFGatGDLA~RKL~PALf~L~~~g~Lp~~~~Iig~aR~~~s~e~fr~~~~~~~~~~~~~~~~~~~f~~~~~Y~~~   99 (203)
T d1qkia1          20 THIFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTVADIRKQSEPFFKATPEEKLKLEDFFARNSYVAG   99 (203)
T ss_dssp             CEEEEEETTTSHHHHHTHHHHHHHHHHTTCSCSSEEEEEEBSSCCSCHHHHHHHSCCTTCCGGGHHHHHHHHTTEECCBC
T ss_pred             CcEEEEECcccHHHHhHHHHHHHHHHHcCCCCCCcEEEEEECCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHhhccccC
Confidence            4579999999999765 2222   2333     4669999998755444443332              12335677888


Q ss_pred             eCCCHHHHHHHHHHHHH
Q 027248           69 HVSNGQQRKNLINQTIE   85 (226)
Q Consensus        69 Dv~~~~~v~~~~~~~~~   85 (226)
                      |++++++.+++-+.+.+
T Consensus       100 d~~~~~~~~~L~~~l~~  116 (203)
T d1qkia1         100 QYDDAASYQRLNSHMNA  116 (203)
T ss_dssp             CTTCHHHHHHHHHHHHH
T ss_pred             cCCChhhHHHHHHHHHH
Confidence            99999888887766654

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=85.90  E-value=1.5  Score=33.51  Aligned_cols=76  Identities=16%  Similarity=0.211  Sum_probs=51.2

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCC-eEEEEecCcchHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHH
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQTIE   85 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (226)
                      .++||+||-.|++.|+   ++..+++.|+ +|+.++.++ ....+.+...+.  ..++.++..|+.+.+.          
T Consensus        36 ~~~~~~VLDlGcGtG~---ls~~aa~~Ga~~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~~~l~~----------  101 (328)
T d1g6q1_          36 LFKDKIVLDVGCGTGI---LSMFAAKHGAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLEDVHL----------  101 (328)
T ss_dssp             HHTTCEEEEETCTTSH---HHHHHHHTCCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCC----------
T ss_pred             cCCcCEEEEeCCCCCH---HHHHHHHhCCCEEEEEeCCH-HHHHHHHHHHHhCccccceEEEeehhhccC----------
Confidence            4689999999998774   4556677887 588888775 444444444433  3468888888876531          


Q ss_pred             HhCCCCEEEEcCC
Q 027248           86 KFGKIDVVVSNAA   98 (226)
Q Consensus        86 ~~~~id~li~nag   98 (226)
                      ..+++|+++...-
T Consensus       102 ~~~~~D~i~se~~  114 (328)
T d1g6q1_         102 PFPKVDIIISEWM  114 (328)
T ss_dssp             SSSCEEEEEECCC
T ss_pred             cccceeEEEEEec
Confidence            1147899987653

>d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Escherichia coli [TaxId: 562]

Probab=85.85  E-value=0.67  Score=35.00  Aligned_cols=76  Identities=13%  Similarity=0.076  Sum_probs=55.1

Q ss_pred             CEEEEEcC-CCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCC-cEEEEEeeCCCHHHHHHHHHHHHHHhCCC
Q 027248           13 KVAIVTAS-TQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI-EVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (226)
Q Consensus        13 k~vlItGa-~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~~~i   90 (226)
                      ..++=.|+ ||.||.++++.+  ...+|+.++.++..++.+.+-....+. ++.+++.|+.+.-.           .+++
T Consensus       110 ~~vlDlGtGSG~I~i~la~~~--p~~~v~avDis~~Al~~A~~Na~~~~~~~v~~~~~d~~~~~~-----------~~~f  176 (274)
T d2b3ta1         110 CRILDLGTGTGAIALALASER--PDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALA-----------GQQF  176 (274)
T ss_dssp             CEEEEETCTTSHHHHHHHHHC--TTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGGT-----------TCCE
T ss_pred             cceeeeehhhhHHHHHHHhhC--CcceeeeccchhHHHhHHHHHHHHhCcccceeeecccccccC-----------CCce
Confidence            44666664 566777776654  346899999999998887777666554 58899999865421           2489


Q ss_pred             CEEEEcCCCCC
Q 027248           91 DVVVSNAAANP  101 (226)
Q Consensus        91 d~li~nag~~~  101 (226)
                      |++|+|+-+..
T Consensus       177 DlIvsNPPYi~  187 (274)
T d2b3ta1         177 AMIVSNPPYID  187 (274)
T ss_dssp             EEEEECCCCBC
T ss_pred             eEEEecchhhh
Confidence            99999998754

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=85.84  E-value=0.68  Score=31.41  Aligned_cols=34  Identities=18%  Similarity=0.012  Sum_probs=26.0

Q ss_pred             CEEEEEcCCCchhHHHHHHHHhCC----CeEEEEecCc
Q 027248           13 KVAIVTASTQGIGFGIAERLGLEG----ASVVVSSRKQ   46 (226)
Q Consensus        13 k~vlItGa~~giG~a~~~~l~~~g----~~v~~~~r~~   46 (226)
                      |.|.|.||||-.|..+.+.|+++.    .++++..++.
T Consensus         2 kkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~   39 (146)
T d1t4ba1           2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQ   39 (146)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSS
T ss_pred             cEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccc
Confidence            458889999999999999887653    3466666554

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=85.84  E-value=0.34  Score=34.87  Aligned_cols=32  Identities=13%  Similarity=0.239  Sum_probs=27.2

Q ss_pred             EEEEcCCCchhHHHHHHHHhCCCeEEEEecCcc
Q 027248           15 AIVTASTQGIGFGIAERLGLEGASVVVSSRKQK   47 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~   47 (226)
                      ++|.||+.. |+..|.++++.|.+|+++.+...
T Consensus         8 viVIG~GpA-Gl~aA~~aa~~G~kV~lie~~~~   39 (233)
T d1v59a1           8 VVIIGGGPA-GYVAAIKAAQLGFNTACVEKRGK   39 (233)
T ss_dssp             EEEECCSHH-HHHHHHHHHHTTCCEEEEESSSS
T ss_pred             EEEECCCHH-HHHHHHHHHHCCCcEEEEEecCC
Confidence            788888544 99999999999999999987643

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=85.65  E-value=0.38  Score=36.28  Aligned_cols=31  Identities=16%  Similarity=0.280  Sum_probs=26.1

Q ss_pred             EEEEcCCCchhHHHHHHHHhCCC-eEEEEecCc
Q 027248           15 AIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQ   46 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g~-~v~~~~r~~   46 (226)
                      |+|.|| |-+|.++|.+|+++|. +|.+++|+.
T Consensus         4 ViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           4 IVIIGA-GIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            677765 5889999999999997 599998874

>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=85.53  E-value=0.39  Score=34.53  Aligned_cols=40  Identities=18%  Similarity=0.312  Sum_probs=33.2

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcc
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK   47 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~   47 (226)
                      ..+++||+|+|.|++.. |..++..+++.+.+++.+.|+..
T Consensus        27 ~~~~~gK~V~VvG~G~S-a~dia~~~~~~~~~~~~~~~~~~   66 (235)
T d1w4xa2          27 PVDFSGQRVGVIGTGSS-GIQVSPQIAKQAAELFVFQRTPH   66 (235)
T ss_dssp             CCCCBTCEEEEECCSHH-HHHHHHHHHHHBSEEEEEESSCC
T ss_pred             CCCCCCCEEEEECCCcc-HHHHHHHHHhhhccccccccccc
Confidence            35689999999987643 78899999999999888888753

>d1fl2a2 c.3.1.5 (A:326-451) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=85.53  E-value=1.2  Score=29.12  Aligned_cols=38  Identities=21%  Similarity=0.123  Sum_probs=30.0

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcc
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK   47 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~   47 (226)
                      .++||.++|.|+ |.-...-|..|++...+|.++.|.++
T Consensus        27 ~~~gk~V~VvGg-G~sA~~~A~~L~~~a~~V~li~r~~~   64 (126)
T d1fl2a2          27 LFKGKRVAVIGG-GNSGVEAAIDLAGIVEHVTLLEFAPE   64 (126)
T ss_dssp             GGBTCEEEEECC-SHHHHHHHHHHHTTBSEEEEECSSSS
T ss_pred             hcCCceEEEEeC-CHHHHHHHHhhhccCCceEEEecccc
Confidence            488999999997 45555666788888778999988753

>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Caffeoyl-CoA O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=85.17  E-value=5.2  Score=28.86  Aligned_cols=85  Identities=13%  Similarity=0.147  Sum_probs=54.7

Q ss_pred             cCCCEEEEEcCCCchhHH-HHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCC--cEEEEEeeCCCHHHHHHHHHHHHHH
Q 027248           10 FQGKVAIVTASTQGIGFG-IAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI--EVIGVVCHVSNGQQRKNLINQTIEK   86 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a-~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (226)
                      ...|+||=+|...|..-. +++.+. .+.+|+.+..+++..+.+.+-+.+.+.  ++.++..|.  .+.++++.+. ...
T Consensus        58 ~~~k~iLEiGT~~GyStl~la~al~-~~g~v~tie~~~~~~~~A~~~~~~~g~~~~i~~~~g~a--~~~L~~l~~~-~~~  133 (227)
T d1susa1          58 INAKNTMEIGVYTGYSLLATALAIP-EDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPA--LPVLDEMIKD-EKN  133 (227)
T ss_dssp             HTCCEEEEECCGGGHHHHHHHHHSC-TTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCH--HHHHHHHHHC-GGG
T ss_pred             cCCCcEEEecchhhhhHHHHHhhCC-CCcEEEEEeccchhHHHHHHHHHHhccccceeeeehHH--HHHHHHHHhc-ccc
Confidence            356899999987766544 444543 456999999999988888877776654  355554443  2223333221 112


Q ss_pred             hCCCCEEEEcCC
Q 027248           87 FGKIDVVVSNAA   98 (226)
Q Consensus        87 ~~~id~li~nag   98 (226)
                      .+.+|+++..|-
T Consensus       134 ~~~fD~iFiDa~  145 (227)
T d1susa1         134 HGSYDFIFVDAD  145 (227)
T ss_dssp             TTCBSEEEECSC
T ss_pred             CCceeEEEeccc
Confidence            358999998764

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=85.10  E-value=2.6  Score=31.54  Aligned_cols=102  Identities=11%  Similarity=0.002  Sum_probs=63.3

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhC-CCeEEEEecCcchHHHHHHHHHhcCC--cEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLE-GASVVVSSRKQKNVDEAVVKLKARGI--EVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      .|.+||=.|++-|   .++..+++. |++|+.++.+++..+.+.+...+.+.  .+.+...|..+.             -
T Consensus        52 ~g~~VLDiGCG~G---~~a~~~a~~~g~~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~~~d~~~~-------------~  115 (280)
T d2fk8a1          52 PGMTLLDIGCGWG---TTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDF-------------A  115 (280)
T ss_dssp             TTCEEEEESCTTS---HHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGC-------------C
T ss_pred             CCCEEEEecCCch---HHHHHHHHhCceeEEEecchHHHHHHHHHHHHhhccccchhhhhhhhhhh-------------c
Confidence            3789999998855   234455544 89999999999988888777776654  344444454332             1


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEe
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~s  146 (226)
                      ++.|.++..--+-.       ...+.+.           .+++.+...|+++|+++.-+
T Consensus       116 ~~fD~i~si~~~eh-------~~~~~~~-----------~~f~~i~~~LkpgG~~~i~~  156 (280)
T d2fk8a1         116 EPVDRIVSIEAFEH-------FGHENYD-----------DFFKRCFNIMPADGRMTVQS  156 (280)
T ss_dssp             CCCSEEEEESCGGG-------TCGGGHH-----------HHHHHHHHHSCTTCEEEEEE
T ss_pred             cchhhhhHhhHHHH-------hhhhhHH-----------HHHHHHHhccCCCceEEEEE
Confidence            47888875543321       2111112           22455566677788876644

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=84.96  E-value=0.58  Score=33.74  Aligned_cols=76  Identities=12%  Similarity=0.197  Sum_probs=52.1

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCC
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id   91 (226)
                      |.+||=.|++.|.-......+...| +|+.++.+++.++.+.+..... .++.++..|..++..-...       .+.+|
T Consensus        57 g~~VLDlGcG~G~~~~~la~~v~~g-~V~gvDis~~~i~~a~~~a~~~-~ni~~i~~d~~~~~~~~~~-------~~~vd  127 (209)
T d1nt2a_          57 DERVLYLGAASGTTVSHLADIVDEG-IIYAVEYSAKPFEKLLELVRER-NNIIPLLFDASKPWKYSGI-------VEKVD  127 (209)
T ss_dssp             SCEEEEETCTTSHHHHHHHHHTTTS-EEEEECCCHHHHHHHHHHHHHC-SSEEEECSCTTCGGGTTTT-------CCCEE
T ss_pred             CCEEEEeCCcCCHHHHHHHHhccCC-eEEEEeCCHHHHHHHHHHhhcc-CCceEEEeeccCccccccc-------cceEE
Confidence            7899999998775444333444445 8999999999888877766554 4788888888876642221       23566


Q ss_pred             EEEEc
Q 027248           92 VVVSN   96 (226)
Q Consensus        92 ~li~n   96 (226)
                      +++++
T Consensus       128 ~v~~~  132 (209)
T d1nt2a_         128 LIYQD  132 (209)
T ss_dssp             EEEEC
T ss_pred             EEEec
Confidence            66654

>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-epi-vancosaminyltransferase GtfA
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=84.77  E-value=1.2  Score=33.96  Aligned_cols=80  Identities=18%  Similarity=0.178  Sum_probs=44.3

Q ss_pred             CEEEEEcCCC-ch--hHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCC----------------H
Q 027248           13 KVAIVTASTQ-GI--GFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN----------------G   73 (226)
Q Consensus        13 k~vlItGa~~-gi--G~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~----------------~   73 (226)
                      |+++.+|||+ -|  -.+++++|.++|++|.+++.  +......   .+.+-.+..+..+...                .
T Consensus         2 ril~~~~gt~Ghi~P~laLA~~L~~rGh~V~~~~~--~~~~~~v---~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (391)
T d1pn3a_           2 RVLITGCGSRGDTEPLVALAARLRELGADARMCLP--PDYVERC---AEVGVPMVPVGRAVRAGAREPGELPPGAAEVVT   76 (391)
T ss_dssp             EEEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEEC--GGGHHHH---HHHTCCEEECSSCSSGGGSCTTCCCTTCGGGHH
T ss_pred             EEEEEcCCChhHHHHHHHHHHHHHHCCCEEEEEEC--hhhHhHH---HHCCCeEEECCccHHHHhhChhhhhHHHHHHHH
Confidence            4555566663 34  45699999999999988874  2222222   2223233222222110                2


Q ss_pred             HHHHHHHHHHHHHhCCCCEEEEcC
Q 027248           74 QQRKNLINQTIEKFGKIDVVVSNA   97 (226)
Q Consensus        74 ~~v~~~~~~~~~~~~~id~li~na   97 (226)
                      ..++..++.+.+....+|.+|...
T Consensus        77 ~~~~~~~~~l~~~~~~~D~vi~~~  100 (391)
T d1pn3a_          77 EVVAEWFDKVPAAIEGCDAVVTTG  100 (391)
T ss_dssp             HHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred             HHHHHHHHHHHHHhcCCCeEEEcc
Confidence            234555566666666789888643

>d1h9aa1 c.2.1.3 (A:1-181,A:413-426) Glucose 6-phosphate dehydrogenase, N-terminal domain {Leuconostoc mesenteroides [TaxId: 1245]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose 6-phosphate dehydrogenase, N-terminal domain
species: Leuconostoc mesenteroides [TaxId: 1245]

Probab=84.72  E-value=1.6  Score=30.91  Aligned_cols=69  Identities=12%  Similarity=-0.029  Sum_probs=40.4

Q ss_pred             EEEEcCCCchhHHH-HHHH---HhC-----CCeEEEEecCcchHHHHHHHHHhc--------------CCcEEEEEeeCC
Q 027248           15 AIVTASTQGIGFGI-AERL---GLE-----GASVVVSSRKQKNVDEAVVKLKAR--------------GIEVIGVVCHVS   71 (226)
Q Consensus        15 vlItGa~~giG~a~-~~~l---~~~-----g~~v~~~~r~~~~~~~~~~~~~~~--------------~~~~~~~~~Dv~   71 (226)
                      +||.||||.+.+.- --.|   ...     ..+++.++|++-..++..+.+.+.              -..+..+..|+.
T Consensus         8 lVIFGaTGDLa~RKL~PAL~~L~~~g~lp~~~~Iig~aR~~~~~e~f~~~v~~~l~~~~~~~~~~~~~~~~~~y~~~~~~   87 (195)
T d1h9aa1           8 VTFFGGTGDLAKRKLYPSVFNLYKKGYLQKHFAIVGTARQALNDDEFKQLVRDSIKDFTDDQAQAEAFIEHFSYRAHDVT   87 (195)
T ss_dssp             EEEETTTSHHHHHTHHHHHHHHHHTTSSCSSEEEEEEESSCCCHHHHHHHHHHHHGGGCSCHHHHHHHHTTEEEEECCTT
T ss_pred             EEEECcccHHHHhHHHHHHHHHHHcCCCCCCCEEEEEECCcCcHHHHHHHHHHHHhhccchHhhHHHHhhccceeeEeec
Confidence            45889999998752 2122   222     356899999876555443332211              224566777777


Q ss_pred             CHHHHHHHHHHH
Q 027248           72 NGQQRKNLINQT   83 (226)
Q Consensus        72 ~~~~v~~~~~~~   83 (226)
                      ++++...+.+.+
T Consensus        88 ~~~~~~~l~~~l   99 (195)
T d1h9aa1          88 DAASYAVLKEAI   99 (195)
T ss_dssp             CTTTHHHHHHHH
T ss_pred             cHhhHHHHHHHH
Confidence            776655554444

>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=84.47  E-value=0.41  Score=37.87  Aligned_cols=40  Identities=18%  Similarity=0.305  Sum_probs=30.1

Q ss_pred             CcccccccccCCCEEEEEcCCCchhHHHHHHHHh------CCCeEEEEecCc
Q 027248            1 MEKMKMAKRFQGKVAIVTASTQGIGFGIAERLGL------EGASVVVSSRKQ   46 (226)
Q Consensus         1 ~~~~~~~~~~~gk~vlItGa~~giG~a~~~~l~~------~g~~v~~~~r~~   46 (226)
                      |+++.|.+|     |+|.||+ -=|...|..|++      .|.+|.++.+..
T Consensus        26 m~~~~~e~D-----ViIVGgG-PAGlsaA~~LA~l~~~~~~Gl~VlllEK~~   71 (380)
T d2gmha1          26 MERFAEEAD-----VVIVGAG-PAGLSAATRLKQLAAQHEKDLRVCLVEKAA   71 (380)
T ss_dssp             CCCCEEECS-----EEEECCS-HHHHHHHHHHHHHHHHTTCCCCEEEECSSS
T ss_pred             cccccccCC-----EEEECCC-HHHHHHHHHHHhhhhhhcCCCEEEEEcCCC
Confidence            666766666     7888765 346677777776      899999999874

>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase EF2452
species: Enterococcus faecalis [TaxId: 1351]

Probab=84.47  E-value=3.2  Score=28.76  Aligned_cols=81  Identities=11%  Similarity=0.096  Sum_probs=55.5

Q ss_pred             ccCCCEEEEEc-CCCchhHHHHHHHHhCCCe-EEEEecCcchHHHHHHHHHhcC--CcEEEEEeeCCCHHHHHHHHHHHH
Q 027248            9 RFQGKVAIVTA-STQGIGFGIAERLGLEGAS-VVVSSRKQKNVDEAVVKLKARG--IEVIGVVCHVSNGQQRKNLINQTI   84 (226)
Q Consensus         9 ~~~gk~vlItG-a~~giG~a~~~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~   84 (226)
                      .+.|+++|=.. |+|++|.+    .+++|+. |+.++.+++..+.+.+.+...+  .++.++..|+      .+++++..
T Consensus        39 ~~~~~~vLDlfaGsG~~g~e----a~srGa~~v~~ve~~~~a~~~~~~N~~~~~~~~~~~i~~~D~------~~~l~~~~  108 (182)
T d2fhpa1          39 YFDGGMALDLYSGSGGLAIE----AVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDA------NRALEQFY  108 (182)
T ss_dssp             CCSSCEEEETTCTTCHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCH------HHHHHHHH
T ss_pred             hcCCCEEEEcccccccccce----eeecchhHHHHHHHHHHHHHHHHHHhhhhhcccccccccccc------hhhhhhhc
Confidence            46788877554 46667775    4557875 9999999988887776665433  3577777776      33455555


Q ss_pred             HHhCCCCEEEEcCCC
Q 027248           85 EKFGKIDVVVSNAAA   99 (226)
Q Consensus        85 ~~~~~id~li~nag~   99 (226)
                      ....+.|+++..+-+
T Consensus       109 ~~~~~fDlIflDPPY  123 (182)
T d2fhpa1         109 EEKLQFDLVLLDPPY  123 (182)
T ss_dssp             HTTCCEEEEEECCCG
T ss_pred             ccCCCcceEEechhh
Confidence            555689999977643

>d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Catechol O-methyltransferase, COMT
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=84.42  E-value=2.4  Score=30.32  Aligned_cols=81  Identities=17%  Similarity=0.178  Sum_probs=53.1

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCC--cEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI--EVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      .+.|+||=+|...|......-.....+.+|+.++.+++..+.+.+.+...+.  ++.++..|..+      ++.++.+.+
T Consensus        55 ~kpk~ILEiGt~~G~Sti~la~al~~~g~v~sid~~~~~~~~a~~~~~~~gl~~~i~l~~Gd~~e------~l~~l~~~~  128 (214)
T d2cl5a1          55 YSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEMNPDYAAITQQMLNFAGLQDKVTILNGASQD------LIPQLKKKY  128 (214)
T ss_dssp             HCCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHH------HGGGHHHHS
T ss_pred             hCCCEEEEEccCchhHHHHHHHhCCCccEEEEEeccHHHHHHHHHHHHHcCCCccceeeeccccc------cccchhhcc
Confidence            4568999999877765433222234567999999999888877777766553  57777666532      334444443


Q ss_pred             --CCCCEEEEc
Q 027248           88 --GKIDVVVSN   96 (226)
Q Consensus        88 --~~id~li~n   96 (226)
                        +.+|+++.-
T Consensus       129 ~~~~~D~ifiD  139 (214)
T d2cl5a1         129 DVDTLDMVFLD  139 (214)
T ss_dssp             CCCCEEEEEEC
T ss_pred             cccccceeeec
Confidence              468888754

>d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: YxiM C-terminal domain-like
domain: Hypothetical protein YxiM
species: Bacillus subtilis [TaxId: 1423]

Probab=84.01  E-value=3.5  Score=28.61  Aligned_cols=70  Identities=7%  Similarity=-0.027  Sum_probs=38.8

Q ss_pred             cCCCEEEEEcCCCc-------------hhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHH
Q 027248           10 FQGKVAIVTASTQG-------------IGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQR   76 (226)
Q Consensus        10 ~~gk~vlItGa~~g-------------iG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   76 (226)
                      +++|++++.|=|--             -+.-+.+.|-..+.+|+-.+.+-.........                     
T Consensus         1 ~~~~ti~~~GDS~~~g~~~~~~~~~~Gw~~~L~~~l~~~~~~v~N~gi~G~t~~~~~~~---------------------   59 (208)
T d2o14a2           1 VTNRTIYVGGDSTVCNYYPLNSSKQAGWGQMLPHYIDKHTFQVRNMASGGQIARGFRND---------------------   59 (208)
T ss_dssp             CCCCEEEEEECTTTSCCSSTTTCSBCCHHHHGGGTSCTTTCEEEECCCTTCCHHHHHHS---------------------
T ss_pred             CCCCEEEEEEcccccCcCCCCCCCCCCHHHHHHHHhCCCceEEEeCeechhhhccHhhh---------------------
Confidence            47899999997632             33444555544566666555544333222110                     


Q ss_pred             HHHHHHHHHHhCCCCEEEEcCCCCC
Q 027248           77 KNLINQTIEKFGKIDVVVSNAAANP  101 (226)
Q Consensus        77 ~~~~~~~~~~~~~id~li~nag~~~  101 (226)
                       ....++.....+.|++|...|...
T Consensus        60 -~~~~~~~~~~~~~D~vvi~~G~ND   83 (208)
T d2o14a2          60 -GQLEAILKYIKPGDYFMLQLGIND   83 (208)
T ss_dssp             -SHHHHHHTTCCTTCEEEEECCTGG
T ss_pred             -hhHHHHHHhcCCCCEEEEEcCCCc
Confidence             012233333446799998888754

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=83.87  E-value=2.2  Score=28.95  Aligned_cols=82  Identities=13%  Similarity=0.220  Sum_probs=48.4

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeC---CCHHHHHHHHHHHHHHh
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHV---SNGQQRKNLINQTIEKF   87 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv---~~~~~v~~~~~~~~~~~   87 (226)
                      +|+++.|.+.+||.|--.+..+.+.|.++.-  -+++..+++.+.+... .. .-=..|+   .+.+...++++.+.+ .
T Consensus         2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l~~--l~~~t~~~L~~~lp~~-~~-~~NPlD~~~~~~~~~~~~~l~~~~~-d   76 (163)
T d2csua3           2 RGNKVAIMTNAGGPGVLTADELDKRGLKLAT--LEEKTIEELRSFLPPM-AA-VKNPVDMIASARGEDYYRTAKLLLQ-D   76 (163)
T ss_dssp             SSSEEEEEESCHHHHHHHHHHHHTTTCEECC--CCHHHHHHHHHHSCTT-CE-ESSEEECCTTCCHHHHHHHHHHHHH-S
T ss_pred             CCCeEEEEECChHHHHHHHHHHHHcCCccCC--CCHHHHHHHHHhCCCc-cc-CCCcccccCCCCHHHHHHHHHHHHc-C
Confidence            6899999999999999999999999966532  2332222322222211 11 0011244   345556666655554 3


Q ss_pred             CCCCEEEEcC
Q 027248           88 GKIDVVVSNA   97 (226)
Q Consensus        88 ~~id~li~na   97 (226)
                      +.+|.++...
T Consensus        77 ~~vd~v~v~~   86 (163)
T d2csua3          77 PNVDMLIAIC   86 (163)
T ss_dssp             TTCSEEEEEE
T ss_pred             CCcCEEEEee
Confidence            5788765433

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=83.84  E-value=0.43  Score=35.16  Aligned_cols=31  Identities=19%  Similarity=0.260  Sum_probs=26.6

Q ss_pred             EEEEcCCCchhHHHHHHHHhCCCeEEEEecCc
Q 027248           15 AIVTASTQGIGFGIAERLGLEGASVVVSSRKQ   46 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~   46 (226)
                      |+|.|| |--|+..|..|+++|++|.++.++.
T Consensus         3 V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           3 VAVVGG-GISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             EEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            788887 5568999999999999999998864

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=83.58  E-value=2.6  Score=26.69  Aligned_cols=35  Identities=20%  Similarity=0.183  Sum_probs=27.7

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHh---CCCeEEEEecCcc
Q 027248           12 GKVAIVTASTQGIGFGIAERLGL---EGASVVVSSRKQK   47 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~---~g~~v~~~~r~~~   47 (226)
                      .|.++|.|| |-+|.++|..|.+   .|.+|.++.|.+.
T Consensus        18 p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~~   55 (117)
T d1feca2          18 PKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGDM   55 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSSS
T ss_pred             CCeEEEECC-ChHHHHHHHHhHhhcccccccceeccccc
Confidence            588998875 6899999976654   4889999998764

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=83.48  E-value=0.51  Score=33.40  Aligned_cols=37  Identities=16%  Similarity=0.179  Sum_probs=29.3

Q ss_pred             EEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHH
Q 027248           15 AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAV   53 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~   53 (226)
                      +.|.| .|-+|+.++..|+ +|++|+..+.++++.+.+.
T Consensus         3 I~ViG-lG~vGl~~a~~~a-~g~~V~g~Din~~~v~~l~   39 (196)
T d1dlja2           3 IAVAG-SGYVGLSLGVLLS-LQNEVTIVDILPSKVDKIN   39 (196)
T ss_dssp             EEEEC-CSHHHHHHHHHHT-TTSEEEEECSCHHHHHHHH
T ss_pred             EEEEC-CChhHHHHHHHHH-CCCcEEEEECCHHHHHHHh
Confidence            55565 7999999998665 6999999999987765543

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=83.30  E-value=0.72  Score=31.14  Aligned_cols=32  Identities=13%  Similarity=0.157  Sum_probs=25.5

Q ss_pred             EEEEcCCCchhHHHHHHHHhCC---CeEEEEecCc
Q 027248           15 AIVTASTQGIGFGIAERLGLEG---ASVVVSSRKQ   46 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g---~~v~~~~r~~   46 (226)
                      |.|.||||-.|.++.+.|.+++   .++..++.+.
T Consensus         5 VaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~   39 (144)
T d2hjsa1           5 VAVVGATGSVGEALVGLLDERDFPLHRLHLLASAE   39 (144)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTT
T ss_pred             EEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecc
Confidence            8899999999999999998654   3566655543

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=83.17  E-value=0.31  Score=34.36  Aligned_cols=32  Identities=19%  Similarity=0.123  Sum_probs=25.3

Q ss_pred             EEEEEcCCCchhHHHHHHHHhCC-CeEEEEecC
Q 027248           14 VAIVTASTQGIGFGIAERLGLEG-ASVVVSSRK   45 (226)
Q Consensus        14 ~vlItGa~~giG~a~~~~l~~~g-~~v~~~~r~   45 (226)
                      +|.|.||||-.|.++.+.|.++. .++..+..+
T Consensus         3 kVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~   35 (176)
T d1vkna1           3 RAGIIGATGYTGLELVRLLKNHPEAKITYLSSR   35 (176)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHCTTEEEEEEECS
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCCceEEEeecc
Confidence            48899999999999999999875 455544433

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=83.05  E-value=0.46  Score=35.49  Aligned_cols=32  Identities=16%  Similarity=0.217  Sum_probs=28.3

Q ss_pred             EEEEcCCCchhHHHHHHHHhCCCeEEEEecCcc
Q 027248           15 AIVTASTQGIGFGIAERLGLEGASVVVSSRKQK   47 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~   47 (226)
                      |+|.||+ =.|+.+|..|.+.|.+|+++.++++
T Consensus         5 V~IvGaG-p~Gl~~A~~L~~~G~~v~vlE~~~~   36 (292)
T d1k0ia1           5 VAIIGAG-PSGLLLGQLLHKAGIDNVILERQTP   36 (292)
T ss_dssp             EEEECCS-HHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred             EEEECcC-HHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            7888876 7789999999999999999999764

>d1mioa_ c.92.2.3 (A:) Nitrogenase iron-molybdenum protein, alpha chain {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: Chelatase-like
superfamily: "Helical backbone" metal receptor
family: Nitrogenase iron-molybdenum protein
domain: Nitrogenase iron-molybdenum protein, alpha chain
species: Clostridium pasteurianum [TaxId: 1501]

Probab=82.67  E-value=3.4  Score=33.97  Aligned_cols=36  Identities=19%  Similarity=0.191  Sum_probs=30.5

Q ss_pred             cccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEec
Q 027248            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSR   44 (226)
Q Consensus         8 ~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r   44 (226)
                      ..++||++.|.|++. ...++++.|.+.|.+++.++.
T Consensus       331 ~~L~GKrv~i~~g~~-~~~~~~~~l~elGmevv~~g~  366 (525)
T d1mioa_         331 EKLQGKTACLYVGGS-RSHTYMNMLKSFGVDSLVAGF  366 (525)
T ss_dssp             HHHTTCEEEEEESSS-HHHHHHHHHHHHTCEEEEEEE
T ss_pred             HhhCCCceEEecCch-HHHHHHHHHHHcCCeEEEeee
Confidence            468899999998766 788999999999999887664

>d1v71a1 c.79.1.1 (A:6-323) Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c)
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=82.51  E-value=7.4  Score=29.07  Aligned_cols=84  Identities=15%  Similarity=0.124  Sum_probs=45.5

Q ss_pred             EEEEcCCCchhHHHHHHHHhCCCeEE-EEecCcchHHHHHHHHHhcCCcEEEEEeeC----------------------C
Q 027248           15 AIVTASTQGIGFGIAERLGLEGASVV-VSSRKQKNVDEAVVKLKARGIEVIGVVCHV----------------------S   71 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g~~v~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv----------------------~   71 (226)
                      .++++.+|.-|.+++..-...|.+++ ++..+...  .....+...|.++..+..+.                      .
T Consensus        71 ~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~--~k~~~l~~~Ga~vi~~~~~~~~~~~~a~~~a~~~g~~~~~~~~  148 (318)
T d1v71a1          71 GVLTFSSGNHAQAIALSAKILGIPAKIIMPLDAPE--AKVAATKGYGGQVIMYDRYKDDREKMAKEISEREGLTIIPPYD  148 (318)
T ss_dssp             CEEECCSSHHHHHHHHHHHHTTCCEEEEEETTCCH--HHHHHHHHTTCEEEEECTTTTCHHHHHHHHHHHHTCBCCCSSS
T ss_pred             eeeeeccchhhHHHHHhhcccccceeecccccccH--HHHHHHHHcCCcEEeccCCchHHHHHHHHHHHhcCCEecCCcc
Confidence            47778888888888888777776633 33333221  22333444444443332222                      1


Q ss_pred             CHHH---HHHHHHHHHHHhCCCCEEEEcCCCC
Q 027248           72 NGQQ---RKNLINQTIEKFGKIDVVVSNAAAN  100 (226)
Q Consensus        72 ~~~~---v~~~~~~~~~~~~~id~li~nag~~  100 (226)
                      ++..   ......++.++.+.+|++|...|..
T Consensus       149 ~~~~~~g~~t~~~Ei~~q~~~~d~vvv~~G~G  180 (318)
T d1v71a1         149 HPHVLAGQGTAAKELFEEVGPLDALFVCLGGG  180 (318)
T ss_dssp             SHHHHHHHTHHHHHHHHHHCCCSEEEEECSSS
T ss_pred             ccccccccchHHHHHHHhcCCCCEEEEcCCch
Confidence            2221   1123445556667788888877754

>d1pvva2 c.78.1.1 (A:151-313) Ornithine transcarbamoylase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=82.50  E-value=1  Score=30.90  Aligned_cols=37  Identities=16%  Similarity=0.214  Sum_probs=32.8

Q ss_pred             ccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecC
Q 027248            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRK   45 (226)
Q Consensus         9 ~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~   45 (226)
                      +++|++|++.|-.+.+..++++.+...|+++.+++=.
T Consensus         1 sl~gl~Ia~VGD~~nv~~Sli~~l~~~g~~v~~~~P~   37 (163)
T d1pvva2           1 TIKGVKVVYVGDGNNVAHSLMIAGTKLGADVVVATPE   37 (163)
T ss_dssp             CCTTCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCT
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEeccc
Confidence            4689999999999999999999999999998877653

>d1miob_ c.92.2.3 (B:) Nitrogenase iron-molybdenum protein, beta chain {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: Chelatase-like
superfamily: "Helical backbone" metal receptor
family: Nitrogenase iron-molybdenum protein
domain: Nitrogenase iron-molybdenum protein, beta chain
species: Clostridium pasteurianum [TaxId: 1501]

Probab=82.49  E-value=1.9  Score=34.71  Aligned_cols=83  Identities=17%  Similarity=0.107  Sum_probs=49.2

Q ss_pred             ccccCCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecC--cchHHHH-HHHHHhcCCcEEEEEeeCCCHHHHHHHHHHH
Q 027248            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRK--QKNVDEA-VVKLKARGIEVIGVVCHVSNGQQRKNLINQT   83 (226)
Q Consensus         7 ~~~~~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~--~~~~~~~-~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   83 (226)
                      ...+.||+++|.|. .....++++.|.+.|..+..+.-.  .....+. .+.+.+.+... ....+-.|..++.+.+.+.
T Consensus       306 ~~~l~Gkrv~I~~~-~~~~~~l~~~L~elg~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~v~~~~d~~e~~~~i~~~  383 (457)
T d1miob_         306 QQYLQGKKVALLGD-PDEIIALSKFIIELGAIPKYVVTGTPGMKFQKEIDAMLAEAGIEG-SKVKVEGDFFDVHQWIKNE  383 (457)
T ss_dssp             HHHHTTCEEEEEEC-HHHHHHHHHHHHTTTCEEEEEEESSCCHHHHHHHHHHHHTTTCCS-CEEEESCBHHHHHHHHHHS
T ss_pred             HHHhCCCEEEEEcC-cHHHHHHHHHHHHcCCeeeeeecCCCCHHHHHHHHHHHHhcCCCC-CEEEeCCCHHHHHHHHHhc
Confidence            34578999999875 458889999999999885544332  2233333 33333333221 1123445666665555432


Q ss_pred             HHHhCCCCEEEEc
Q 027248           84 IEKFGKIDVVVSN   96 (226)
Q Consensus        84 ~~~~~~id~li~n   96 (226)
                           ++|++|-+
T Consensus       384 -----~pDLvig~  391 (457)
T d1miob_         384 -----GVDLLISN  391 (457)
T ss_dssp             -----CCSEEEES
T ss_pred             -----CCCEEEEC
Confidence                 89999854

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=82.13  E-value=1.7  Score=31.47  Aligned_cols=80  Identities=16%  Similarity=0.083  Sum_probs=55.9

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHh-CC----CeEEEEecCcchHHHHHHHHHhc------CCcEEEEEeeCCCHHHHHHH
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGL-EG----ASVVVSSRKQKNVDEAVVKLKAR------GIEVIGVVCHVSNGQQRKNL   79 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~-~g----~~v~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~v~~~   79 (226)
                      +|.+||..|+++|--.++.-+++. .|    .+|+.+.++++-.+.+.+.+...      ..++.+...|..+..     
T Consensus        80 ~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~~~~-----  154 (223)
T d1r18a_          80 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGY-----  154 (223)
T ss_dssp             TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCC-----
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEeccccccc-----
Confidence            478999999999988887777764 45    47999999987666554443221      236778888865321     


Q ss_pred             HHHHHHHhCCCCEEEEcCCCC
Q 027248           80 INQTIEKFGKIDVVVSNAAAN  100 (226)
Q Consensus        80 ~~~~~~~~~~id~li~nag~~  100 (226)
                           ...+.+|.++.+++..
T Consensus       155 -----~~~~~fD~Iiv~~a~~  170 (223)
T d1r18a_         155 -----PPNAPYNAIHVGAAAP  170 (223)
T ss_dssp             -----GGGCSEEEEEECSCBS
T ss_pred             -----ccccceeeEEEEeech
Confidence                 1235899999888864

>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Carminomycin 4-O-methyltransferase
species: Streptomyces peucetius [TaxId: 1950]

Probab=82.11  E-value=6  Score=28.66  Aligned_cols=101  Identities=19%  Similarity=0.120  Sum_probs=61.4

Q ss_pred             CCEEEEEcCCCchhHHHHHHHHhC--CCeEEEEecCcchHHHHHHHHHhcC--CcEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248           12 GKVAIVTASTQGIGFGIAERLGLE--GASVVVSSRKQKNVDEAVVKLKARG--IEVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      .+++|=.|++.|.   ++..|+++  +.+++.++. ++.++...+.+.+.+  .++.++..|+.+..            .
T Consensus        81 ~~~VLDvGcG~G~---~~~~la~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~rv~~~~~D~~~~~------------~  144 (253)
T d1tw3a2          81 VRHVLDVGGGKGG---FAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEPL------------P  144 (253)
T ss_dssp             CSEEEEETCTTSH---HHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSCC------------S
T ss_pred             CCEEEEeCCCCCH---HHHHHHHhcceeEEEEccC-HHHHHHHHHHHHHhhcccchhhccccchhhc------------c
Confidence            4789988887663   33344444  456777776 555666666665553  46888989986532            1


Q ss_pred             CCCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEEe
Q 027248           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (226)
Q Consensus        88 ~~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~s  146 (226)
                      +..|+++.+.-.       +..+.++..           .+++.+...|+.+|+++..-
T Consensus       145 ~~~D~v~~~~vl-------h~~~d~~~~-----------~~L~~~~~~LkPGG~l~i~e  185 (253)
T d1tw3a2         145 RKADAIILSFVL-------LNWPDHDAV-----------RILTRCAEALEPGGRILIHE  185 (253)
T ss_dssp             SCEEEEEEESCG-------GGSCHHHHH-----------HHHHHHHHTEEEEEEEEEEE
T ss_pred             cchhheeecccc-------ccCCchhhH-----------HHHHHHHHhcCCCcEEEEEe
Confidence            367888755433       223333332           34566667777788887654

>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=82.09  E-value=0.54  Score=33.48  Aligned_cols=31  Identities=16%  Similarity=0.144  Sum_probs=26.0

Q ss_pred             EEEEcCCCchhHHHHHHHHhCCCeEEEEecCc
Q 027248           15 AIVTASTQGIGFGIAERLGLEGASVVVSSRKQ   46 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~   46 (226)
                      ++|+||+ -=|+..|.++++.|.+|+++.+.+
T Consensus         6 viIIGgG-pAGl~aA~~aar~G~~V~viE~~~   36 (229)
T d3lada1           6 VIVIGAG-PGGYVAAIKSAQLGLKTALIEKYK   36 (229)
T ss_dssp             EEEECCS-HHHHHHHHHHHHHTCCEEEEECCB
T ss_pred             EEEECcC-HHHHHHHHHHHHCCCeEEEEeccc
Confidence            6778775 449999999999999999998754

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=81.87  E-value=2.7  Score=30.08  Aligned_cols=102  Identities=12%  Similarity=0.044  Sum_probs=68.9

Q ss_pred             CCCEEEEEcCCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcC-CcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG-IEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        11 ~gk~vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      .|.+||=.|++.|.   ++..|++.+.+|+.++-+++-++.+.+.....+ .++.++..|..+..- .         .+.
T Consensus        16 ~~~rILDiGcGtG~---~~~~la~~~~~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~~~~~~-~---------~~~   82 (234)
T d1xxla_          16 AEHRVLDIGAGAGH---TALAFSPYVQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPF-P---------DDS   82 (234)
T ss_dssp             TTCEEEEESCTTSH---HHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCS-C---------TTC
T ss_pred             CCCEEEEeCCcCcH---HHHHHHHhCCeEEEEeCChhhhhhhhhhhcccccccccccccccccccc-c---------ccc
Confidence            36789999988774   445667788999999999988887777666554 358888888865321 0         148


Q ss_pred             CCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEE
Q 027248           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLI  145 (226)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~  145 (226)
                      +|+++++-.+.. ..     +.              ..+++.+...|+.+|++++.
T Consensus        83 fD~v~~~~~l~~-~~-----d~--------------~~~l~~~~r~LkpgG~~~~~  118 (234)
T d1xxla_          83 FDIITCRYAAHH-FS-----DV--------------RKAVREVARVLKQDGRFLLV  118 (234)
T ss_dssp             EEEEEEESCGGG-CS-----CH--------------HHHHHHHHHHEEEEEEEEEE
T ss_pred             cceeeeeceeec-cc-----CH--------------HHHHHHHHHeeCCCcEEEEE
Confidence            998887654432 11     11              13355666667777877664

>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Guanidinoacetate methyltransferase
domain: Guanidinoacetate methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.76  E-value=0.98  Score=32.72  Aligned_cols=110  Identities=10%  Similarity=0.013  Sum_probs=65.0

Q ss_pred             cCCCEEEEEcCCCchhHHHHHHHHhCC-CeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Q 027248           10 FQGKVAIVTASTQGIGFGIAERLGLEG-ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (226)
Q Consensus        10 ~~gk~vlItGa~~giG~a~~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   88 (226)
                      .+|+.||=.|++.|+   .+..+++.+ .+|+.++.+++-++.+.+........+..+..|.   ..   ....+  ..+
T Consensus        52 ~~g~~VLdIGcG~G~---~a~~~a~~~~~~v~~id~s~~~~~~a~~~~~~~~~~~~~~~~~~---~~---~~~~~--~~~  120 (229)
T d1zx0a1          52 SKGGRVLEVGFGMAI---AASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLW---ED---VAPTL--PDG  120 (229)
T ss_dssp             TTCEEEEEECCTTSH---HHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCH---HH---HGGGS--CTT
T ss_pred             cCCCeEEEeeccchH---HHHHHHHcCCCeEEEeCCCHHHHHHHHHHhhhcccccccccccc---cc---ccccc--ccc
Confidence            478899999988774   455666665 6799999999888777766666555565554442   11   11111  124


Q ss_pred             CCCEEEEcCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCEEEEE
Q 027248           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLI  145 (226)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~iv~~  145 (226)
                      .+|.++..+-...  ......  .+           .-.+.+.+...|+.+|.+++.
T Consensus       121 ~fD~i~fD~~~~~--~~~~~~--~~-----------~~~~~~~~~r~LkpGG~~~~~  162 (229)
T d1zx0a1         121 HFDGILYDTYPLS--EETWHT--HQ-----------FNFIKNHAFRLLKPGGVLTYC  162 (229)
T ss_dssp             CEEEEEECCCCCB--GGGTTT--HH-----------HHHHHHTHHHHEEEEEEEEEC
T ss_pred             cccceeecccccc--cccccc--cC-----------HHHHHHHHHHHcCCCcEEEEE
Confidence            7888876553321  111111  11           112445566667778877663

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=81.73  E-value=0.2  Score=34.05  Aligned_cols=37  Identities=14%  Similarity=-0.111  Sum_probs=26.4

Q ss_pred             CCCchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHH
Q 027248           20 STQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKL   56 (226)
Q Consensus        20 a~~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~   56 (226)
                      |+|-+|+++++.|.+.+..+.+.+|++++.+.+.++.
T Consensus         6 G~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~   42 (153)
T d2i76a2           6 GTGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVY   42 (153)
T ss_dssp             SCCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHT
T ss_pred             eCcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhcc
Confidence            5678999999988664443568899998888876654

>d1c4oa2 c.37.1.19 (A:410-583) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Tandem AAA-ATPase domain
domain: Nucleotide excision repair enzyme UvrB
species: Thermus thermophilus [TaxId: 274]

Probab=81.63  E-value=3.4  Score=28.62  Aligned_cols=65  Identities=18%  Similarity=0.179  Sum_probs=50.9

Q ss_pred             HhCCCeEEEEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCCCEEEEcCCCC
Q 027248           33 GLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAAN  100 (226)
Q Consensus        33 ~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~id~li~nag~~  100 (226)
                      .+.|.++++.+.+....+.+.+.+.+.|.++..+..++.+.+ -++.++++..  |.+++||+.--..
T Consensus        28 ~~~g~r~lvfc~t~~~~~~l~~~L~~~Gi~a~~~Hg~~~~~e-R~~~l~~F~~--G~~~vLVaT~v~~   92 (174)
T d1c4oa2          28 AARGERTLVTVLTVRMAEELTSFLVEHGIRARYLHHELDAFK-RQALIRDLRL--GHYDCLVGINLLR   92 (174)
T ss_dssp             HHTTCEEEEECSSHHHHHHHHHHHHHTTCCEEEECTTCCHHH-HHHHHHHHHT--TSCSEEEESCCCC
T ss_pred             HhcCCcEEEEEcchhHHHHHHHHHHhcCCceEEEecccchHH-HHHHHHHHHC--CCeEEEEeeeeee
Confidence            456889999999999999999999999999988888876554 3455555543  7999999876443

>d1wbha1 c.1.10.1 (A:1-213) KDPG aldolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Aldolase
family: Class I aldolase
domain: KDPG aldolase
species: Escherichia coli [TaxId: 562]

Probab=81.43  E-value=6.6  Score=28.05  Aligned_cols=76  Identities=20%  Similarity=0.190  Sum_probs=56.0

Q ss_pred             CCE-EEEEcCCCchhHHHHHHHHhCCCeEE-EEecCcchHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Q 027248           12 GKV-AIVTASTQGIGFGIAERLGLEGASVV-VSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (226)
Q Consensus        12 gk~-vlItGa~~giG~a~~~~l~~~g~~v~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   89 (226)
                      ++. .+|++-+-.-...+++.|.+.|.+++ ++-|++. ..+..+++.+..+++.+=..-+.+.++++.+.+.      .
T Consensus        15 ~~iipvlr~~~~~~a~~~~~al~~~Gi~~iEitl~tp~-a~~~I~~l~~~~p~~~vGaGTV~~~~~~~~a~~a------G   87 (213)
T d1wbha1          15 GPVVPVIVVKKLEHAVPMAKALVAGGVRVLNVTLRTEC-AVDAIRAIAKEVPEAIVGAGTVLNPQQLAEVTEA------G   87 (213)
T ss_dssp             CSEEEEECCSSGGGHHHHHHHHHHTTCCEEEEESCSTT-HHHHHHHHHHHCTTSEEEEESCCSHHHHHHHHHH------T
T ss_pred             CCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEeCCChh-HHHHHHHHHHHCCCCeeeccccccHHHHHHHHHC------C
Confidence            455 47788888899999999999998854 5556554 4566666666666777777889999998877652      5


Q ss_pred             CCEEE
Q 027248           90 IDVVV   94 (226)
Q Consensus        90 id~li   94 (226)
                      .+++|
T Consensus        88 a~Fiv   92 (213)
T d1wbha1          88 AQFAI   92 (213)
T ss_dssp             CSCEE
T ss_pred             CcEEE
Confidence            55555

>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Azotobacter vinelandii [TaxId: 354]

Probab=80.52  E-value=0.8  Score=34.37  Aligned_cols=34  Identities=21%  Similarity=0.326  Sum_probs=28.8

Q ss_pred             CEEEEEcCCCchhHH-----HHHHHHhCCCeEEEEecCcc
Q 027248           13 KVAIVTASTQGIGFG-----IAERLGLEGASVVVSSRKQK   47 (226)
Q Consensus        13 k~vlItGa~~giG~a-----~~~~l~~~g~~v~~~~r~~~   47 (226)
                      |+|+|.| =||.|+.     ++..|++.|.+|.++|-+++
T Consensus         3 r~Iaisg-KGGVGKTT~a~NLA~~LA~~G~rVLlID~DpQ   41 (289)
T d2afhe1           3 RQCAIYG-KGGIGKSTTTQNLVAALAEMGKKVMIVGCDPK   41 (289)
T ss_dssp             EEEEEEE-CTTSSHHHHHHHHHHHHHHTTCCEEEEEECSS
T ss_pred             cEEEEEC-CCCCCHHHHHHHHHHHHHHCCCCEEEEecCCC
Confidence            5677887 8999987     57888999999999999865

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.29  E-value=1.2  Score=29.50  Aligned_cols=35  Identities=20%  Similarity=0.163  Sum_probs=27.6

Q ss_pred             CCEEEEEcCCCchhHHHHHHHH----hCCCeEEEEecCcc
Q 027248           12 GKVAIVTASTQGIGFGIAERLG----LEGASVVVSSRKQK   47 (226)
Q Consensus        12 gk~vlItGa~~giG~a~~~~l~----~~g~~v~~~~r~~~   47 (226)
                      +|+++|.|| |.+|.+++..|.    +.|.+|.++.+.+.
T Consensus        37 ~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~~   75 (137)
T d1m6ia2          37 VKSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEKG   75 (137)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEeccccc
Confidence            688998875 788888888775    45889999888654

>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA2
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=80.20  E-value=8.1  Score=28.85  Aligned_cols=73  Identities=8%  Similarity=-0.093  Sum_probs=48.3

Q ss_pred             CCCEEEEEcCC-CchhHHHHHHHHhCCCeEEEEecCcchHHHHHHHHHhcCC--cEEEEEeeCCCHHHHHHHHHHHHHHh
Q 027248           11 QGKVAIVTAST-QGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI--EVIGVVCHVSNGQQRKNLINQTIEKF   87 (226)
Q Consensus        11 ~gk~vlItGa~-~giG~a~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (226)
                      .|.+||=.|++ ||+...+++.   .|++|+.++.+++..+...+...+.+.  .+.+...|....             -
T Consensus        61 ~G~~VLDiGCG~G~~~~~~a~~---~g~~v~git~s~~q~~~a~~~~~~~~l~~~v~~~~~d~~~~-------------~  124 (291)
T d1kpia_          61 PGMTLLDIGCGWGSTMRHAVAE---YDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF-------------D  124 (291)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHH---HCCEEEEEESCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC-------------C
T ss_pred             CCCEEEEecCcchHHHHHHHHh---cCcceeeccchHHHHHHHHHHHHhhccchhhhhhhhccccc-------------c
Confidence            47889999987 5554444443   489999999999887777776666543  344444443211             2


Q ss_pred             CCCCEEEEcCCC
Q 027248           88 GKIDVVVSNAAA   99 (226)
Q Consensus        88 ~~id~li~nag~   99 (226)
                      ++.|.+++.--+
T Consensus       125 ~~fD~i~sie~~  136 (291)
T d1kpia_         125 EPVDRIVSLGAF  136 (291)
T ss_dssp             CCCSEEEEESCG
T ss_pred             cccceEeechhH
Confidence            589999866544

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=80.07  E-value=0.92  Score=32.18  Aligned_cols=31  Identities=16%  Similarity=0.203  Sum_probs=27.1

Q ss_pred             EEEEcCCCchhHHHHHHHHhCCCeEEEEecCc
Q 027248           15 AIVTASTQGIGFGIAERLGLEGASVVVSSRKQ   46 (226)
Q Consensus        15 vlItGa~~giG~a~~~~l~~~g~~v~~~~r~~   46 (226)
                      ++|.|| |-.|.+.+.++++.|.+|.++.++.
T Consensus         5 vvVIG~-G~aG~~aA~~a~~~G~kV~iiE~~~   35 (217)
T d1gesa1           5 YIAIGG-GSGGIASINRAAMYGQKCALIEAKE   35 (217)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEeccC
Confidence            678887 6789999999999999999998853