Your job contains 1 sequence.
>027250
MKMEWPNFQQGGEMERQFQQDGGDTSNGLCVKVMTDEQMELLRKQIAVYAMICEQLVQMH
KVFSAQNEIAGMRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQ
KIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQNP
ESIQSLEDSAPPPRDEDIYPQSPDLGNKFFCFNVLLNKYKLIFSHM
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 027250
(226 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2127968 - symbol:WOX13 "AT4G35550" species:370... 518 9.5e-50 1
TAIR|locus:2030467 - symbol:WOX14 "AT1G20700" species:370... 422 1.4e-39 1
TAIR|locus:2030487 - symbol:WOX10 "AT1G20710" species:370... 388 5.7e-36 1
UNIPROTKB|Q33DK1 - symbol:WOX3 "WUSCHEL-related homeobox ... 154 3.5e-11 1
TAIR|locus:2088550 - symbol:WOX1 "WUSCHEL related homeobo... 160 2.9e-10 1
TAIR|locus:2065484 - symbol:PRS "PRESSED FLOWER" species:... 153 8.8e-10 1
TAIR|locus:2096429 - symbol:WOX11 "AT3G03660" species:370... 154 1.6e-09 1
TAIR|locus:2825767 - symbol:WOX4 "WUSCHEL related homeobo... 149 4.2e-09 1
TAIR|locus:2060902 - symbol:WUS "AT2G17950" species:3702 ... 149 7.8e-09 1
TAIR|locus:2049547 - symbol:PFS2 "PRETTY FEW SEEDS 2" spe... 148 8.0e-09 1
TAIR|locus:2161353 - symbol:WOX8 "AT5G45980" species:3702... 148 1.4e-08 1
TAIR|locus:2057614 - symbol:HB-3 "homeobox-3" species:370... 149 1.5e-08 1
TAIR|locus:2168504 - symbol:WOX2 "WUSCHEL related homeobo... 145 1.7e-08 1
TAIR|locus:2074638 - symbol:WOX5 "WUSCHEL related homeobo... 131 5.6e-08 1
TAIR|locus:2166434 - symbol:WOX7 "AT5G05770" species:3702... 125 7.0e-08 1
UNIPROTKB|Q33DK0 - symbol:WOX1B "WUSCHEL-related homeobox... 139 1.5e-07 1
TAIR|locus:2175941 - symbol:WOX12 "AT5G17810" species:370... 135 4.0e-07 1
UNIPROTKB|P15142 - symbol:CHOX-7 "Homeobox protein CHOX-7... 116 7.7e-07 1
TAIR|locus:2161388 - symbol:AT5G46010 species:3702 "Arabi... 97 0.00011 1
UNIPROTKB|Q91898 - symbol:hesx1-b "Homeobox expressed in ... 108 0.00025 1
UNIPROTKB|E1BF87 - symbol:PRRX2 "Uncharacterized protein"... 104 0.00045 1
UNIPROTKB|F1NL46 - symbol:MIXL1 "Uncharacterized protein"... 91 0.00051 1
RGD|1308265 - symbol:Dmbx1 "diencephalon/mesencephalon ho... 111 0.00066 1
UNIPROTKB|F1NZI9 - symbol:PRRX2 "Paired mesoderm homeobox... 102 0.00078 1
UNIPROTKB|Q90963 - symbol:PRRX2 "Paired mesoderm homeobox... 102 0.00078 1
>TAIR|locus:2127968 [details] [associations]
symbol:WOX13 "AT4G35550" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AL161587 EMBL:AL031135 HOGENOM:HOG000070737 EMBL:AY251404
EMBL:AY048268 EMBL:BT000538 IPI:IPI00543316 PIR:T04660
RefSeq:NP_195280.1 UniGene:At.2408 UniGene:At.50397
ProteinModelPortal:O81788 SMR:O81788 PRIDE:O81788
EnsemblPlants:AT4G35550.1 GeneID:829707 KEGG:ath:AT4G35550
TAIR:At4g35550 eggNOG:NOG283530 InParanoid:O81788 OMA:VEMHKTL
PhylomeDB:O81788 ProtClustDB:CLSN2916183 Genevestigator:O81788
GermOnline:AT4G35550 Uniprot:O81788
Length = 268
Score = 518 (187.4 bits), Expect = 9.5e-50, P = 9.5e-50
Identities = 110/196 (56%), Positives = 130/196 (66%)
Query: 3 MEWPN-FQQGGEMERQFQQ---DGGD-TSNGLCVKVMTDEQMELLRKQIAVYAMICEQLV 57
MEW N Q Q +GG G+ VKVMTDEQ E LRKQIA+Y ICE+LV
Sbjct: 2 MEWDNQLQPNNHHSSNLQGIDVNGGSGAGGGMYVKVMTDEQYETLRKQIAIYGTICERLV 61
Query: 58 QMHKVFSAQNEIAGMRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTP 117
+MHK +AQ ++AG RMG Y DP ++S K+TARQRWTPTP QLQILE ++D+ GTP
Sbjct: 62 EMHKTLTAQQDLAGGRMGGLYADPMMSSLGHKMTARQRWTPTPVQLQILERIFDQGTGTP 121
Query: 118 RKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQSGVVP---NNAESEAETVTHA- 173
KQKI+D+T EL++HGQI+E NVYNWFQNRRAR KRKQ G NN ESE ET A
Sbjct: 122 SKQKIKDITEELSQHGQIAEQNVYNWFQNRRARSKRKQHGGGSSGNNNGESEVETEVEAL 181
Query: 174 -ESRKQNPESIQSLED 188
E R PES+ L D
Sbjct: 182 NEKRVVRPESLLGLPD 197
>TAIR|locus:2030467 [details] [associations]
symbol:WOX14 "AT1G20700" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0010072 "primary shoot apical meristem
specification" evidence=IMP] [GO:0009691 "cytokinin biosynthetic
process" evidence=RCA] InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0043565
EMBL:AC069251 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0010072 HOGENOM:HOG000070737
ProtClustDB:CLSN2914683 eggNOG:NOG283530 EMBL:AJ441297
IPI:IPI00533426 RefSeq:NP_173493.2 UniGene:At.41695
ProteinModelPortal:Q9LM84 SMR:Q9LM84 EnsemblPlants:AT1G20700.1
GeneID:838660 KEGG:ath:AT1G20700 TAIR:At1g20700 InParanoid:Q9LM84
OMA:SHRISTR PhylomeDB:Q9LM84 Genevestigator:Q9LM84
GermOnline:AT1G20700 Uniprot:Q9LM84
Length = 211
Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
Identities = 94/198 (47%), Positives = 126/198 (63%)
Query: 13 EMERQFQQDGGDTSNGLCV-KVMTDEQMELLRKQIAVYAMICEQLVQMHKVFSAQNEIA- 70
E ++ ++ + NG +VMT+EQME+LRKQIAVYA+IC+QLV +H S+ + ++
Sbjct: 9 EKSKEIEEMDREIQNGAYSGRVMTEEQMEILRKQIAVYAVICDQLVLLHNSLSSYHPLSS 68
Query: 71 GMR-MGNPYFDPFVASGSQ-KLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAE 128
G+R M YFDP AS S +++ R RWTPT QLQILE +YDE GTP +++I+++ E
Sbjct: 69 GVRPMVGGYFDPMGASSSSHRISTRHRWTPTSTQLQILESIYDEGSGTPNRRRIREIATE 128
Query: 129 LAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQNPESIQSLED 188
L++HGQI+ETNVYNWFQNRRAR KRKQ N +++ VT E R S D
Sbjct: 129 LSEHGQITETNVYNWFQNRRARSKRKQPQTTTANGQADDVAVTTEERR--------SCGD 180
Query: 189 SAPPPRDEDIYPQSPDLG 206
S E I SPDLG
Sbjct: 181 SGGLESYEHILFPSPDLG 198
>TAIR|locus:2030487 [details] [associations]
symbol:WOX10 "AT1G20710" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0043565
EMBL:AC069251 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 IPI:IPI00538890 PIR:G86339 RefSeq:NP_173494.1
UniGene:At.51695 ProteinModelPortal:Q9LM83 SMR:Q9LM83
EnsemblPlants:AT1G20710.1 GeneID:838661 KEGG:ath:AT1G20710
TAIR:At1g20710 eggNOG:NOG325202 HOGENOM:HOG000070737
InParanoid:Q9LM83 OMA:NPRRIKE PhylomeDB:Q9LM83
ProtClustDB:CLSN2914683 Genevestigator:Q9LM83 Uniprot:Q9LM83
Length = 197
Score = 388 (141.6 bits), Expect = 5.7e-36, P = 5.7e-36
Identities = 90/195 (46%), Positives = 123/195 (63%)
Query: 32 KVMTDEQMELLRKQIAVYAMICEQLVQMHKVFSAQNEIA-GMR-MGNPYFDPFVASGSQK 89
+VMTDEQME LRKQIA+YA++C+QLV +H S+ ++ GM M YFDP VAS S
Sbjct: 13 RVMTDEQMETLRKQIAIYAVLCDQLVFLHNSLSSVPLLSSGMNPMRGEYFDPMVASSSAH 72
Query: 90 -LTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRR 148
++ R RWTPT QLQILE++Y E GTP ++I+++T EL++HGQI E NVY+WFQNRR
Sbjct: 73 GMSTRPRWTPTTTQLQILENIYKEGSGTPNPRRIKEITMELSEHGQIMEKNVYHWFQNRR 132
Query: 149 ARLKRKQSGVVP-NNAESEAETVTHAESRKQNPESIQSLEDSAPPPRDEDIYPQSPDLGN 207
AR KRKQ +++++ VT E R + + E + ++P SPDLG
Sbjct: 133 ARSKRKQPPTTTITSSQADDAAVTTTEERGRCGDDSGGFESY-----EHILFP-SPDLGI 186
Query: 208 KFFCFNVLLNKYKLI 222
+ LLN+ K I
Sbjct: 187 EH-----LLNRDKFI 196
>UNIPROTKB|Q33DK1 [details] [associations]
symbol:WOX3 "WUSCHEL-related homeobox 3" species:39947
"Oryza sativa Japonica Group" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 EMBL:DP000010 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:CM000148
EMBL:DP000011 eggNOG:NOG302146 EMBL:AB218893 EMBL:AM234748
ProteinModelPortal:Q33DK1 IntAct:Q33DK1
EnsemblPlants:LOC_Os11g01130.1 EnsemblPlants:LOC_Os12g01120.1
Gramene:Q33DK1 OMA:SNQLEEW Uniprot:Q33DK1
Length = 203
Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 30/64 (46%), Positives = 40/64 (62%)
Query: 91 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR 150
T RW PTP QL ILE +Y TP +IQ +TA LA +G+I NV+ WFQN +AR
Sbjct: 4 TPSTRWCPTPEQLMILEEMYRSGVRTPNAAEIQQITAHLAYYGRIEGKNVFYWFQNHKAR 63
Query: 151 LKRK 154
+++
Sbjct: 64 ERQR 67
>TAIR|locus:2088550 [details] [associations]
symbol:WOX1 "WUSCHEL related homeobox 1" species:3702
"Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048513 "organ development"
evidence=IGI] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005829 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0048513
EMBL:AB019230 EMBL:AY251394 IPI:IPI00529632 RefSeq:NP_188428.3
UniGene:At.49388 ProteinModelPortal:Q6X7K0 SMR:Q6X7K0 PaxDb:Q6X7K0
PRIDE:Q6X7K0 EnsemblPlants:AT3G18010.1 GeneID:821325
KEGG:ath:AT3G18010 TAIR:At3g18010 eggNOG:NOG308045
HOGENOM:HOG000090885 InParanoid:Q6X7K0 OMA:DEGELQH PhylomeDB:Q6X7K0
ProtClustDB:CLSN2920267 Genevestigator:Q6X7K0 Uniprot:Q6X7K0
Length = 350
Score = 160 (61.4 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 34/85 (40%), Positives = 49/85 (57%)
Query: 95 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 154
RW PTP QL++LE +Y + TP IQ +TA+L ++G+I NV+ WFQN +AR ++K
Sbjct: 76 RWNPTPDQLRVLEELYRQGTRTPSADHIQQITAQLRRYGKIEGKNVFYWFQNHKARERQK 135
Query: 155 QSGVVPNNAESEAETVTHAESRKQN 179
+ + E ETV S N
Sbjct: 136 RRRQMETGHE---ETVLSTASLVSN 157
>TAIR|locus:2065484 [details] [associations]
symbol:PRS "PRESSED FLOWER" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0009908 "flower development" evidence=IMP]
[GO:0009943 "adaxial/abaxial axis specification" evidence=IMP]
[GO:0009947 "centrolateral axis specification" evidence=IMP]
[GO:0010865 "stipule development" evidence=IMP] [GO:0048513 "organ
development" evidence=IGI] InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0030154 EMBL:CP002685 GO:GO:0008283
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009908 EMBL:AC007171 EMBL:AB058920
EMBL:AY251397 IPI:IPI00536433 PIR:A84687 RefSeq:NP_180429.1
UniGene:At.28458 ProteinModelPortal:Q9SIB4 SMR:Q9SIB4 STRING:Q9SIB4
PRIDE:Q9SIB4 EnsemblPlants:AT2G28610.1 GeneID:817410
KEGG:ath:AT2G28610 TAIR:At2g28610 eggNOG:NOG302146
InParanoid:Q9SIB4 OMA:PVASTRW ProtClustDB:CLSN2913193
Genevestigator:Q9SIB4 GO:GO:0009943 GO:GO:0009947 GO:GO:0010865
Uniprot:Q9SIB4
Length = 244
Score = 153 (58.9 bits), Expect = 8.8e-10, P = 8.8e-10
Identities = 31/63 (49%), Positives = 40/63 (63%)
Query: 92 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARL 151
A RW PTP QL ILE +Y TP +IQ +TA LA +G+I NV+ WFQN +AR
Sbjct: 5 ASTRWCPTPEQLMILEEMYRSGIRTPNAVQIQQITAHLAFYGRIEGKNVFYWFQNHKARD 64
Query: 152 KRK 154
++K
Sbjct: 65 RQK 67
>TAIR|locus:2096429 [details] [associations]
symbol:WOX11 "AT3G03660" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0016114 "terpenoid biosynthetic process" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002686 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AC009327
HOGENOM:HOG000064623 ProtClustDB:CLSN2680059 IPI:IPI00891503
RefSeq:NP_001118563.1 UniGene:At.40942 ProteinModelPortal:B3H5D3
SMR:B3H5D3 EnsemblPlants:AT3G03660.2 GeneID:821196
KEGG:ath:AT3G03660 OMA:ILESIFH ArrayExpress:B3H5D3
Genevestigator:B3H5D3 Uniprot:B3H5D3
Length = 297
Score = 154 (59.3 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 34/92 (36%), Positives = 50/92 (54%)
Query: 81 PFVASGSQKLT-ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETN 139
P ASGS R RW+P P Q+ ILE ++ P K++ + L K G + + N
Sbjct: 18 PSSASGSTSAEPVRSRWSPKPEQILILESIFHSGMVNPPKEETVRIRKMLEKFGAVGDAN 77
Query: 140 VYNWFQNRRARLKRKQSGVVPNNAESEAETVT 171
V+ WFQNRR+R +R+Q + A ++A T T
Sbjct: 78 VFYWFQNRRSRSRRRQRQLQAAAAAADATTNT 109
>TAIR|locus:2825767 [details] [associations]
symbol:WOX4 "WUSCHEL related homeobox 4" species:3702
"Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEP] [GO:0010067 "procambium histogenesis"
evidence=IMP] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0007165 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AC083835 GO:GO:0010067 EMBL:AY251396 EMBL:BT010692
EMBL:BT010974 IPI:IPI00536109 PIR:F96511 RefSeq:NP_175145.2
UniGene:At.38691 ProteinModelPortal:Q6X7J9 SMR:Q6X7J9 IntAct:Q6X7J9
EnsemblPlants:AT1G46480.1 GeneID:841113 KEGG:ath:AT1G46480
GeneFarm:3104 TAIR:At1g46480 eggNOG:NOG268206 HOGENOM:HOG000272700
InParanoid:Q6X7J9 OMA:ENEYKRT PhylomeDB:Q6X7J9
ProtClustDB:CLSN2680403 Genevestigator:Q6X7J9 Uniprot:Q6X7J9
Length = 251
Score = 149 (57.5 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 95 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 154
RW PT Q+ ILE +Y TP Q+I+ +T +L K+G+I NV+ WFQN +AR ++K
Sbjct: 90 RWNPTQEQIGILEMLYKGGMRTPNAQQIEHITLQLGKYGKIEGKNVFYWFQNHKARERQK 149
Query: 155 Q 155
Q
Sbjct: 150 Q 150
>TAIR|locus:2060902 [details] [associations]
symbol:WUS "AT2G17950" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0048653 "anther development" evidence=IMP] [GO:0080166 "stomium
development" evidence=IMP] [GO:0010492 "maintenance of shoot apical
meristem identity" evidence=IGI] [GO:0009827 "plant-type cell wall
modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=RCA] [GO:0010093 "specification of floral organ identity"
evidence=RCA] [GO:0048440 "carpel development" evidence=RCA]
[GO:0019827 "stem cell maintenance" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 EMBL:CP002685
GO:GO:0043565 GO:GO:0048477 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010492 EMBL:AC006201
EMBL:AJ012310 EMBL:AY086385 IPI:IPI00522840 PIR:D84558 PIR:T00829
RefSeq:NP_565429.1 UniGene:At.51 ProteinModelPortal:Q9SB92
SMR:Q9SB92 IntAct:Q9SB92 STRING:Q9SB92 EnsemblPlants:AT2G17950.1
GeneID:816305 KEGG:ath:AT2G17950 GeneFarm:4830 TAIR:At2g17950
eggNOG:NOG286377 InParanoid:Q9SB92 OMA:GEDHING PhylomeDB:Q9SB92
ProtClustDB:CLSN2688215 Genevestigator:Q9SB92 GO:GO:0080166
Uniprot:Q9SB92
Length = 292
Score = 149 (57.5 bits), Expect = 7.8e-09, P = 7.8e-09
Identities = 37/102 (36%), Positives = 56/102 (54%)
Query: 85 SGSQKLTARQ---RWTPTPAQLQILEHVY-DECKGTPRKQKIQDMTAELAKHGQISETNV 140
SGS T RQ RWTPT Q++IL+ +Y + +P +IQ +TA L + G+I NV
Sbjct: 25 SGSGGYTCRQTSTRWTPTTEQIKILKELYYNNAIRSPTADQIQKITARLRQFGKIEGKNV 84
Query: 141 YNWFQNRRARLKRKQ--SGVVPNNAESEAETVTHAESRKQNP 180
+ WFQN +AR ++K+ +G S +V A + +P
Sbjct: 85 FYWFQNHKARERQKKRFNGTNMTTPSSSPNSVMMAANDHYHP 126
>TAIR|locus:2049547 [details] [associations]
symbol:PFS2 "PRETTY FEW SEEDS 2" species:3702
"Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;NAS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009409 "response
to cold" evidence=NAS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048482 "ovule morphogenesis" evidence=IMP]
[GO:0009965 "leaf morphogenesis" evidence=IMP] [GO:0016049 "cell
growth" evidence=IMP] [GO:0048314 "embryo sac morphogenesis"
evidence=IMP] [GO:0048353 "primary endosperm nucleus" evidence=IDA]
[GO:0048366 "leaf development" evidence=IMP] [GO:0048437 "floral
organ development" evidence=IMP] [GO:0048446 "petal morphogenesis"
evidence=RCA;IMP] [GO:0051301 "cell division" evidence=IMP]
[GO:0048445 "carpel morphogenesis" evidence=RCA] InterPro:IPR001356
InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0030154 EMBL:CP002685 GO:GO:0051301
GO:GO:0016049 GO:GO:0043565 GO:GO:0048477 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009965
EMBL:AC005560 GO:GO:0048446 GO:GO:0048482 EMBL:AY251399
EMBL:AY885222 EMBL:AY085832 IPI:IPI00544402 PIR:E84425
RefSeq:NP_565263.1 UniGene:At.42485 ProteinModelPortal:Q9ZVF5
SMR:Q9ZVF5 STRING:Q9ZVF5 PRIDE:Q9ZVF5 EnsemblPlants:AT2G01500.1
GeneID:814678 KEGG:ath:AT2G01500 TAIR:At2g01500 eggNOG:NOG239725
OMA:CDINGND PhylomeDB:Q9ZVF5 ProtClustDB:CLSN2916958
Genevestigator:Q9ZVF5 GO:GO:0048353 GO:GO:0048314 Uniprot:Q9ZVF5
Length = 271
Score = 148 (57.2 bits), Expect = 8.0e-09, P = 8.0e-09
Identities = 29/66 (43%), Positives = 42/66 (63%)
Query: 92 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR- 150
A RW PTP Q+ LE +Y TP ++IQ + ++L K+G+I NV+ WFQN +AR
Sbjct: 58 ATLRWNPTPEQITTLEELYRSGTRTPTTEQIQQIASKLRKYGRIEGKNVFYWFQNHKARE 117
Query: 151 -LKRKQ 155
LKR++
Sbjct: 118 RLKRRR 123
>TAIR|locus:2161353 [details] [associations]
symbol:WOX8 "AT5G45980" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IGI] [GO:0009793 "embryo development ending
in seed dormancy" evidence=IGI;IMP] [GO:0048825 "cotyledon
development" evidence=IGI;IMP] [GO:0030010 "establishment of cell
polarity" evidence=IMP] [GO:0090451 "cotyledon boundary formation"
evidence=IGI] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0008284 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AB006698 GO:GO:0030010 GO:GO:0048825 GO:GO:0090451
EMBL:AY251400 IPI:IPI00530694 RefSeq:NP_199410.2 UniGene:At.23155
ProteinModelPortal:Q6X7J5 SMR:Q6X7J5 PRIDE:Q6X7J5
EnsemblPlants:AT5G45980.1 GeneID:834638 KEGG:ath:AT5G45980
TAIR:At5g45980 eggNOG:NOG319740 HOGENOM:HOG000154860 OMA:EIQRIRI
PhylomeDB:Q6X7J5 ProtClustDB:CLSN2680017 Genevestigator:Q6X7J5
GermOnline:AT5G45980 Uniprot:Q6X7J5
Length = 325
Score = 148 (57.2 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 25/62 (40%), Positives = 41/62 (66%)
Query: 93 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 152
+ RW P P Q++ILE +++ P +++IQ + L ++GQI + NV+ WFQNR++R K
Sbjct: 53 KPRWNPKPEQIRILESIFNSGTINPPREEIQRIRIRLQEYGQIGDANVFYWFQNRKSRAK 112
Query: 153 RK 154
K
Sbjct: 113 HK 114
>TAIR|locus:2057614 [details] [associations]
symbol:HB-3 "homeobox-3" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0010075 "regulation of meristem
growth" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA;IMP] [GO:0009735 "response to cytokinin stimulus"
evidence=IGI] [GO:0009737 "response to abscisic acid stimulus"
evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0010093 "specification of floral organ identity" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0048440
"carpel development" evidence=RCA] [GO:0048507 "meristem
development" evidence=RCA] InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0005737 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0009735 GO:GO:0008284 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0009793 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:U78721 GO:GO:0010075 HOGENOM:HOG000154860
ProtClustDB:CLSN2680017 EMBL:AY251401 EMBL:AK118501 EMBL:BT005296
IPI:IPI00546241 PIR:G84750 RefSeq:NP_180944.2 UniGene:At.14699
ProteinModelPortal:Q6X7J4 SMR:Q6X7J4 IntAct:Q6X7J4
EnsemblPlants:AT2G33880.1 GeneID:817958 KEGG:ath:AT2G33880
TAIR:At2g33880 eggNOG:NOG331259 InParanoid:Q6X7J4 OMA:QHGASYY
PhylomeDB:Q6X7J4 Genevestigator:Q6X7J4 GermOnline:AT2G33880
Uniprot:Q6X7J4
Length = 378
Score = 149 (57.5 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 24/62 (38%), Positives = 43/62 (69%)
Query: 93 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 152
+ RW P P Q++ILE +++ P +++I+ + A+L ++GQ+ + NV+ WFQNR++R K
Sbjct: 53 KPRWNPKPEQIRILEAIFNSGMVNPPREEIRRIRAQLQEYGQVGDANVFYWFQNRKSRSK 112
Query: 153 RK 154
K
Sbjct: 113 HK 114
>TAIR|locus:2168504 [details] [associations]
symbol:WOX2 "WUSCHEL related homeobox 2" species:3702
"Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009880 "embryonic pattern specification"
evidence=IMP] [GO:0009942 "longitudinal axis specification"
evidence=IMP] [GO:0010654 "apical cell fate commitment"
evidence=IMP] [GO:0008284 "positive regulation of cell
proliferation" evidence=IGI] [GO:0048825 "cotyledon development"
evidence=IGI;IMP] [GO:0080167 "response to karrikin" evidence=IEP]
[GO:0090451 "cotyledon boundary formation" evidence=IGI]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0008284 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0080167 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009942 GO:GO:0048825 EMBL:AB016890 EMBL:AY251392
EMBL:AY251393 IPI:IPI00526689 RefSeq:NP_200742.2 UniGene:At.49429
ProteinModelPortal:Q6X7K1 SMR:Q6X7K1 EnsemblPlants:AT5G59340.1
GeneID:836053 KEGG:ath:AT5G59340 TAIR:At5g59340 eggNOG:NOG294844
HOGENOM:HOG000090362 InParanoid:Q6X7K1 OMA:RAYGHIE PhylomeDB:Q6X7K1
ProtClustDB:CLSN2681679 Genevestigator:Q6X7K1 GermOnline:AT5G59340
GO:GO:0010654 GO:GO:0090451 Uniprot:Q6X7K1
Length = 260
Score = 145 (56.1 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 27/61 (44%), Positives = 38/61 (62%)
Query: 95 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 154
RW PT Q+ +LE++Y E TP +IQ +T L +G I NV+ WFQN +AR ++K
Sbjct: 14 RWNPTKDQITLLENLYKEGIRTPSADQIQQITGRLRAYGHIEGKNVFYWFQNHKARQRQK 73
Query: 155 Q 155
Q
Sbjct: 74 Q 74
>TAIR|locus:2074638 [details] [associations]
symbol:WOX5 "WUSCHEL related homeobox 5" species:3702
"Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0009733 "response to auxin stimulus"
evidence=IEP] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009733
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 EMBL:AC073395 EMBL:AY251398 EMBL:AY150812
IPI:IPI00524533 RefSeq:NP_187735.2 UniGene:At.39787
ProteinModelPortal:Q8H1D2 SMR:Q8H1D2 STRING:Q8H1D2
EnsemblPlants:AT3G11260.1 GeneID:820297 KEGG:ath:AT3G11260
TAIR:At3g11260 eggNOG:NOG241769 HOGENOM:HOG000238479
InParanoid:Q8H1D2 OMA:TGTKCGR PhylomeDB:Q8H1D2
ProtClustDB:CLSN2690857 Genevestigator:Q8H1D2 Uniprot:Q8H1D2
Length = 182
Score = 131 (51.2 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 25/61 (40%), Positives = 39/61 (63%)
Query: 95 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 154
RW PT QL+IL ++ TP +IQ ++ EL+ +G+I NV+ WFQN +AR ++K
Sbjct: 24 RWNPTVEQLKILTDLFRAGLRTPTTDQIQKISTELSFYGKIESKNVFYWFQNHKARERQK 83
Query: 155 Q 155
+
Sbjct: 84 R 84
>TAIR|locus:2166434 [details] [associations]
symbol:WOX7 "AT5G05770" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AB005237
eggNOG:NOG241769 EMBL:AB493739 IPI:IPI00518458 RefSeq:NP_196196.1
UniGene:At.54734 ProteinModelPortal:Q9FFK0 SMR:Q9FFK0
EnsemblPlants:AT5G05770.1 GeneID:830462 KEGG:ath:AT5G05770
TAIR:At5g05770 InParanoid:Q9FFK0 PhylomeDB:Q9FFK0
Genevestigator:Q9FFK0 Uniprot:Q9FFK0
Length = 122
Score = 125 (49.1 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 23/60 (38%), Positives = 38/60 (63%)
Query: 95 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 154
RW PT Q+++L ++ TP +IQ ++ EL+ +G+I NV+ WFQN +AR ++K
Sbjct: 29 RWNPTVEQVKLLTDLFKAGLRTPSTDQIQKISMELSFYGKIESKNVFYWFQNHKARERQK 88
>UNIPROTKB|Q33DK0 [details] [associations]
symbol:WOX1B "WUSCHEL-related homeobox 1B" species:39947
"Oryza sativa Japonica Group" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:CM000141 EMBL:AB218894
ProteinModelPortal:Q33DK0 IntAct:Q33DK0 Gramene:Q33DK0
Uniprot:Q33DK0
Length = 289
Score = 139 (54.0 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 26/62 (41%), Positives = 41/62 (66%)
Query: 95 RWTPTPAQLQILEHVYDECK-GTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKR 153
RWTPT Q++IL +Y C +P ++IQ + A L ++G+I NV+ WFQN +AR ++
Sbjct: 35 RWTPTTEQIKILRELYYSCGIRSPNSEQIQRIAAMLRQYGRIEGKNVFYWFQNHKARERQ 94
Query: 154 KQ 155
K+
Sbjct: 95 KK 96
>TAIR|locus:2175941 [details] [associations]
symbol:WOX12 "AT5G17810" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AB006706
EMBL:AY251403 EMBL:AK117910 EMBL:BT006232 IPI:IPI00524309
RefSeq:NP_001190327.1 RefSeq:NP_197283.2 UniGene:At.31506
ProteinModelPortal:Q8GY25 SMR:Q8GY25 IntAct:Q8GY25
EnsemblPlants:AT5G17810.1 EnsemblPlants:AT5G17810.2 GeneID:831649
KEGG:ath:AT5G17810 TAIR:At5g17810 eggNOG:NOG256790
HOGENOM:HOG000064623 InParanoid:Q8GY25 OMA:NNGMENL PhylomeDB:Q8GY25
ProtClustDB:CLSN2680059 Genevestigator:Q8GY25 Uniprot:Q8GY25
Length = 268
Score = 135 (52.6 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 29/85 (34%), Positives = 46/85 (54%)
Query: 93 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 152
R RW+P P Q+ ILE +++ P K + + L K G + + NV+ WFQNRR+R +
Sbjct: 19 RARWSPKPEQILILESIFNSGTVNPPKDETVRIRKMLEKFGAVGDANVFYWFQNRRSRSR 78
Query: 153 RKQSGVVPNNAESEAETVTHAESRK 177
R+ ++ A + A T AE +
Sbjct: 79 RRHRQLLA--ATTAAATSIGAEDHQ 101
>UNIPROTKB|P15142 [details] [associations]
symbol:CHOX-7 "Homeobox protein CHOX-7" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 EMBL:X16159 IPI:IPI00683482 PIR:S05005
UniGene:Gga.190 ProteinModelPortal:P15142 SMR:P15142
HOVERGEN:HBG100178 Uniprot:P15142
Length = 124
Score = 116 (45.9 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 43/128 (33%), Positives = 64/128 (50%)
Query: 71 GMRMGNPYFD-PFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMT--A 127
G G P + P SG+ K + R+R T QL LE + CK K +T +
Sbjct: 4 GKGKGGPAAEQPPPGSGAGK-SRRRRTAFTSEQLLELEKEF-HCK------KYLSLTERS 55
Query: 128 ELAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQNPESIQSLE 187
++A ++SE V WFQNRRA+ KR ++G V N + E V + + + +P + QSL
Sbjct: 56 QIAHALKLSEVQVKIWFQNRRAKWKRIKAGNVSNRS---GEPVRNPKIVRAHPGARQSLR 112
Query: 188 DSAPPPRD 195
+ P P D
Sbjct: 113 RAQPAPAD 120
>TAIR|locus:2161388 [details] [associations]
symbol:AT5G46010 species:3702 "Arabidopsis thaliana"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005773 "vacuole" evidence=IDA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 SMART:SM00389
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005773
GO:GO:0043565 GO:GO:0003700 SUPFAM:SSF46689 EMBL:AB006698
IPI:IPI00544220 RefSeq:NP_199413.1 UniGene:At.55398
ProteinModelPortal:Q9FNM1 SMR:Q9FNM1 EnsemblPlants:AT5G46010.1
GeneID:834641 KEGG:ath:AT5G46010 TAIR:At5g46010 InParanoid:Q9FNM1
PhylomeDB:Q9FNM1 Genevestigator:Q9FNM1 Uniprot:Q9FNM1
Length = 122
Score = 97 (39.2 bits), Expect = 0.00011, P = 0.00011
Identities = 20/63 (31%), Positives = 32/63 (50%)
Query: 93 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQ-ISETNVYNWFQNRRARL 151
+ W P Q QILE ++ P I+ +T +L +G+ + + +VY WF NR+
Sbjct: 52 KPEWKPNQHQAQILEELFIGGTVNPSLTSIKQITIKLQSYGEEVDDADVYKWFHNRKYSR 111
Query: 152 KRK 154
K K
Sbjct: 112 KPK 114
>UNIPROTKB|Q91898 [details] [associations]
symbol:hesx1-b "Homeobox expressed in ES cells 1-B"
species:8355 "Xenopus laevis" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0030900 "forebrain development" evidence=IMP]
[GO:0045664 "regulation of neuron differentiation" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0060061 "Spemann organizer formation"
evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045664 GO:GO:0043565
GO:GO:0030900 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000122 HOVERGEN:HBG004226 KO:K09354 GO:GO:0060061
EMBL:X60099 EMBL:X70282 PIR:S31859 RefSeq:NP_001156042.1
UniGene:Xl.131 ProteinModelPortal:Q91898 IntAct:Q91898
GeneID:397950 KEGG:xla:397950 CTD:397950 Xenbase:XB-GENE-864952
Uniprot:Q91898
Length = 187
Score = 108 (43.1 bits), Expect = 0.00025, P = 0.00025
Identities = 36/113 (31%), Positives = 57/113 (50%)
Query: 45 QIAVYAMICEQLVQMHKVFSAQNEIAGMRMGNPYFDPFVASGSQKLT----ARQRWTPTP 100
QI V A C+ +Q+H V ++ E +R+ + D + ++L+ R R T
Sbjct: 62 QIPVIA--CDLPIQVHAVHRSEEEETKIRLEKCFGDEDRLTYKRELSWYRGRRPRTAFTR 119
Query: 101 AQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKR 153
+Q++ILE+V+ P D+ ELA + E + WFQNRRA+LKR
Sbjct: 120 SQIEILENVF-RVNSYPGI----DVREELASKLALDEDRIQIWFQNRRAKLKR 167
>UNIPROTKB|E1BF87 [details] [associations]
symbol:PRRX2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051216 "cartilage
development" evidence=IEA] [GO:0048844 "artery morphogenesis"
evidence=IEA] [GO:0048701 "embryonic cranial skeleton
morphogenesis" evidence=IEA] [GO:0045880 "positive regulation of
smoothened signaling pathway" evidence=IEA] [GO:0042474 "middle ear
morphogenesis" evidence=IEA] [GO:0042472 "inner ear morphogenesis"
evidence=IEA] [GO:0030326 "embryonic limb morphogenesis"
evidence=IEA] [GO:0002053 "positive regulation of mesenchymal cell
proliferation" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0042472
GO:GO:0030326 GO:GO:0051216 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GO:GO:0048844 GO:GO:0048701
GeneTree:ENSGT00700000104279 GO:GO:0002053 GO:GO:0045880
GO:GO:0042474 OMA:GVSMANS EMBL:DAAA02032213 EMBL:DAAA02032214
EMBL:DAAA02032215 IPI:IPI00713783 Ensembl:ENSBTAT00000003817
Uniprot:E1BF87
Length = 166
Score = 104 (41.7 bits), Expect = 0.00045, P = 0.00045
Identities = 28/82 (34%), Positives = 42/82 (51%)
Query: 84 ASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNW 143
A+ +K R R T +QLQ LE V++ T + ELA+ +SE V W
Sbjct: 10 AAKRKKKQRRNRTTFNSSQLQALERVFER---THYPDAF--VREELARRVNLSEARVQVW 64
Query: 144 FQNRRARLKRKQSGVVPNNAES 165
FQNRRA+ +R + ++ N + S
Sbjct: 65 FQNRRAKFRRNERAMLANRSAS 86
>UNIPROTKB|F1NL46 [details] [associations]
symbol:MIXL1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GeneTree:ENSGT00700000104128 IPI:IPI00572899
EMBL:AADN02012178 EMBL:AADN02012179 Ensembl:ENSGALT00000038806
OMA:AFPAGRW ArrayExpress:F1NL46 Uniprot:F1NL46
Length = 122
Score = 91 (37.1 bits), Expect = 0.00051, P = 0.00051
Identities = 29/77 (37%), Positives = 40/77 (51%)
Query: 81 PFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNV 140
P A G+ R+R + T AQL+ LE V+ + P I + LA QI E+ +
Sbjct: 48 PPAAEGAPSAQRRKRTSFTAAQLETLELVFQDTM-YP---DIY-LRERLADATQIPESRI 102
Query: 141 YNWFQNRRARLKRKQSG 157
WFQNRRA+ R+Q G
Sbjct: 103 QVWFQNRRAK-SRRQRG 118
>RGD|1308265 [details] [associations]
symbol:Dmbx1 "diencephalon/mesencephalon homeobox 1"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISO] [GO:0005667 "transcription factor complex"
evidence=IEA;ISO] [GO:0007420 "brain development" evidence=IEA]
[GO:0008343 "adult feeding behavior" evidence=IEA;ISO] [GO:0008344
"adult locomotory behavior" evidence=IEA;ISO] [GO:0042803 "protein
homodimerization activity" evidence=IEA;ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046982 "protein heterodimerization activity" evidence=IEA;ISO]
[GO:0048589 "developmental growth" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:1308265 GO:GO:0007420
GO:GO:0043565 GO:GO:0008344 GO:GO:0008343 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000122
GO:GO:0048589 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104128 OrthoDB:EOG4BCDNN IPI:IPI00764573
Ensembl:ENSRNOT00000057055 UCSC:RGD:1308265 Uniprot:D3ZMA3
Length = 381
Score = 111 (44.1 bits), Expect = 0.00066, P = 0.00066
Identities = 33/109 (30%), Positives = 49/109 (44%)
Query: 86 GSQ-KLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWF 144
GSQ + R R T QL+ LE + + T + M LA + E V WF
Sbjct: 65 GSQHRKQRRSRTAFTAQQLEALEKTFQK---THYPDVV--MRERLAMCTNLPEARVQVWF 119
Query: 145 QNRRARLKRKQSGVVPNNAESEAETV-THAESRKQNPESIQSLEDSAPP 192
+NRRA+ ++KQ + + + E +H E + + P S LE PP
Sbjct: 120 KNRRAKFRKKQRSLQKEQLQKQKEAEGSHGEGKMETPASNTQLEAEQPP 168
>UNIPROTKB|F1NZI9 [details] [associations]
symbol:PRRX2 "Paired mesoderm homeobox protein 2"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0002053 "positive regulation of mesenchymal cell
proliferation" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0042472 "inner ear morphogenesis"
evidence=IEA] [GO:0042474 "middle ear morphogenesis" evidence=IEA]
[GO:0045880 "positive regulation of smoothened signaling pathway"
evidence=IEA] [GO:0048701 "embryonic cranial skeleton
morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GeneTree:ENSGT00700000104279 GO:GO:0002053
GO:GO:0045880 IPI:IPI00579776 OMA:GVSMANS EMBL:AADN02026599
Ensembl:ENSGALT00000006733 Uniprot:F1NZI9
Length = 165
Score = 102 (41.0 bits), Expect = 0.00078, P = 0.00078
Identities = 27/78 (34%), Positives = 40/78 (51%)
Query: 88 QKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNR 147
+K R R T +QLQ LE V++ T + ELA+ +SE V WFQNR
Sbjct: 13 KKKQRRNRTTFNSSQLQALERVFER---THYPDAF--VREELARRVNLSEARVQVWFQNR 67
Query: 148 RARLKRKQSGVVPNNAES 165
RA+ +R + ++ N + S
Sbjct: 68 RAKFRRNERAMLANRSAS 85
>UNIPROTKB|Q90963 [details] [associations]
symbol:PRRX2 "Paired mesoderm homeobox protein 2"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 HOVERGEN:HBG021349 OrthoDB:EOG4RR6J8 EMBL:X79695
IPI:IPI00579776 PIR:S49440 UniGene:Gga.53985
ProteinModelPortal:Q90963 SMR:Q90963 STRING:Q90963 eggNOG:NOG309174
InParanoid:Q90963 Uniprot:Q90963
Length = 165
Score = 102 (41.0 bits), Expect = 0.00078, P = 0.00078
Identities = 27/78 (34%), Positives = 40/78 (51%)
Query: 88 QKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNR 147
+K R R T +QLQ LE V++ T + ELA+ +SE V WFQNR
Sbjct: 13 KKKQRRNRTTFNSSQLQALERVFER---THYPDAF--VREELARRVNLSEARVQVWFQNR 67
Query: 148 RARLKRKQSGVVPNNAES 165
RA+ +R + ++ N + S
Sbjct: 68 RAKFRRNERAMLANRSAS 85
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.130 0.388 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 226 226 0.00078 113 3 11 22 0.41 33
32 0.41 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 25
No. of states in DFA: 614 (65 KB)
Total size of DFA: 196 KB (2111 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.70u 0.48s 23.18t Elapsed: 00:00:02
Total cpu time: 22.70u 0.48s 23.18t Elapsed: 00:00:02
Start: Fri May 10 06:54:04 2013 End: Fri May 10 06:54:06 2013