BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027255
(226 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LSV0|GLYR1_ARATH Glyoxylate/succinic semialdehyde reductase 1 OS=Arabidopsis
thaliana GN=GLYR1 PE=1 SV=1
Length = 289
Score = 241 bits (614), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 118/150 (78%), Positives = 130/150 (86%)
Query: 1 MEVGFLGLGIMGKAISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTIT 60
MEVGFLGLGIMGKA+SMNLL+NGFKVTVWNRTLSKCDELV HGA+V SPAEVIKKC T
Sbjct: 1 MEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYT 60
Query: 61 IGMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPV 120
I ML+DP AALSVVFDKGGVLEQIC GKGYIDMSTVD ETS+KI+ AIT KGG F+E PV
Sbjct: 61 IAMLSDPCAALSVVFDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGGRFVEGPV 120
Query: 121 SGSKQPAETGQLVILSAGEKDLGGIANPMF 150
SGSK+PAE GQL+IL+AG+K L + P F
Sbjct: 121 SGSKKPAEDGQLIILAAGDKALFEESIPAF 150
Score = 142 bits (359), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 68/80 (85%), Positives = 73/80 (91%)
Query: 141 DLGGIANPMFKGKGPTMLQSNYAPAFPLKHQQKDMRLALALGDENAVSMPIAAAANEAFK 200
DLG + NPMFKGKGP+M +S+Y PAFPLKHQQKDMRLALALGDENAVSMP+AAAANEAFK
Sbjct: 206 DLGAMTNPMFKGKGPSMNKSSYPPAFPLKHQQKDMRLALALGDENAVSMPVAAAANEAFK 265
Query: 201 KARSLGLGDNDFSAVFEVVK 220
KARSLGLGD DFSAV E VK
Sbjct: 266 KARSLGLGDLDFSAVIEAVK 285
>sp|F4I907|GLYR2_ARATH Glyoxylate/succinic semialdehyde reductase 2, chloroplastic
OS=Arabidopsis thaliana GN=GLYR2 PE=1 SV=1
Length = 358
Score = 157 bits (398), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 80/150 (53%), Positives = 99/150 (66%)
Query: 1 MEVGFLGLGIMGKAISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTIT 60
+ +GFLG+GIMG ++ NL++ G VTVWNRT SKCD LV GA SP EV C +T
Sbjct: 67 VSIGFLGMGIMGSPMAQNLIKAGCDVTVWNRTKSKCDPLVGLGAKYKSSPEEVTATCDLT 126
Query: 61 IGMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPV 120
MLADP +A+ V K G + I GKGY+D+STVD +SI IS+ I G FLEAPV
Sbjct: 127 FAMLADPESAIDVACGKNGAIFGISSGKGYVDVSTVDVASSILISKQIKDTGALFLEAPV 186
Query: 121 SGSKQPAETGQLVILSAGEKDLGGIANPMF 150
SGSK+PAE GQL+ L+AG+K L A P
Sbjct: 187 SGSKKPAEDGQLIFLTAGDKPLYEKAAPFL 216
Score = 99.8 bits (247), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 58/81 (71%)
Query: 143 GGIANPMFKGKGPTMLQSNYAPAFPLKHQQKDMRLALALGDENAVSMPIAAAANEAFKKA 202
G I PM+ KGP+M++S Y AFPLKHQQKDMRLAL L + + S PIAAAANE +K A
Sbjct: 274 GAINAPMYSLKGPSMIKSVYPTAFPLKHQQKDMRLALGLAESVSQSTPIAAAANELYKVA 333
Query: 203 RSLGLGDNDFSAVFEVVKDLK 223
+S GL D DFSAV E +K K
Sbjct: 334 KSYGLSDEDFSAVIEALKAAK 354
>sp|Q5RKN4|GLYR1_DANRE Putative oxidoreductase GLYR1 OS=Danio rerio GN=glyr1 PE=2 SV=1
Length = 462
Score = 157 bits (396), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 77/155 (49%), Positives = 104/155 (67%)
Query: 2 EVGFLGLGIMGKAISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITI 61
+GFLGLG+MG + NLL+ G VTVWNRT KCD + GA +G +PAEV+ C IT
Sbjct: 177 RIGFLGLGLMGSGVVSNLLKMGHVVTVWNRTAEKCDLFIQEGARLGRTPAEVVSMCDITF 236
Query: 62 GMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVS 121
++DP AA +V GVL+ I PGK Y++MSTVD ET ++S+ ITS+GG FLEAPVS
Sbjct: 237 SCVSDPKAARDLVLGPSGVLQGIRPGKCYVEMSTVDPETITELSQVITSRGGRFLEAPVS 296
Query: 122 GSKQPAETGQLVILSAGEKDLGGIANPMFKGKGPT 156
GS+Q + G LVI++AG++ + + F+ G T
Sbjct: 297 GSQQLSNDGMLVIVAAGDRSVYEDCSSCFQAMGKT 331
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 60/110 (54%), Gaps = 10/110 (9%)
Query: 113 GHFLEAPVSGSKQPAETGQ-----LVILSAGEKDLGGIANPMFKGKGPTMLQSNYAPAFP 167
G F+ G TGQ L IL G+ +A+ K +LQ N+ P +
Sbjct: 354 GSFMATIAEGLTLAQATGQSQQTFLDILCQGQ-----MASTFVDQKCQNILQGNFKPDYY 408
Query: 168 LKHQQKDMRLALALGDENAVSMPIAAAANEAFKKARSLGLGDNDFSAVFE 217
LKH QKD+RLA+++GD P+AAAANE +K+A++L DND SAV+
Sbjct: 409 LKHIQKDLRLAISMGDSVNHPTPMAAAANEVYKRAKALDQSDNDMSAVYR 458
>sp|Q5RKH0|GLYR1_RAT Putative oxidoreductase GLYR1 OS=Rattus norvegicus GN=Glyr1 PE=2
SV=1
Length = 552
Score = 157 bits (396), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 77/155 (49%), Positives = 104/155 (67%)
Query: 2 EVGFLGLGIMGKAISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITI 61
++GFLGLG+MG I NLL+ G VTVWNRT KCD + GA +G +PAEV+ C IT
Sbjct: 268 KIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARLGRTPAEVVSTCDITF 327
Query: 62 GMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVS 121
++DP AA +V GVL+ I PGK Y+DMSTVD +T ++++ I S+GG FLEAPVS
Sbjct: 328 ACVSDPKAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVS 387
Query: 122 GSKQPAETGQLVILSAGEKDLGGIANPMFKGKGPT 156
G++Q + G LVIL+AG++ L + F+ G T
Sbjct: 388 GNQQLSNDGMLVILAAGDRGLYEDCSSCFQAMGKT 422
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 49/75 (65%)
Query: 143 GGIANPMFKGKGPTMLQSNYAPAFPLKHQQKDMRLALALGDENAVSMPIAAAANEAFKKA 202
G +A+ K +LQ N+ P F LK+ QKD+RLA+ALGD P+AAAANE +K+A
Sbjct: 474 GQLASIFLDQKCQNILQGNFKPDFYLKYIQKDLRLAIALGDAVNHPTPMAAAANEVYKRA 533
Query: 203 RSLGLGDNDFSAVFE 217
++L DND SAV+
Sbjct: 534 KALDQSDNDMSAVYR 548
>sp|Q49A26|GLYR1_HUMAN Putative oxidoreductase GLYR1 OS=Homo sapiens GN=GLYR1 PE=1 SV=3
Length = 553
Score = 157 bits (396), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 77/155 (49%), Positives = 104/155 (67%)
Query: 2 EVGFLGLGIMGKAISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITI 61
++GFLGLG+MG I NLL+ G VTVWNRT KCD + GA +G +PAEV+ C IT
Sbjct: 269 KIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARLGRTPAEVVSTCDITF 328
Query: 62 GMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVS 121
++DP AA +V GVL+ I PGK Y+DMSTVD +T ++++ I S+GG FLEAPVS
Sbjct: 329 ACVSDPKAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVS 388
Query: 122 GSKQPAETGQLVILSAGEKDLGGIANPMFKGKGPT 156
G++Q + G LVIL+AG++ L + F+ G T
Sbjct: 389 GNQQLSNDGMLVILAAGDRGLYEDCSSCFQAMGKT 423
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 49/75 (65%)
Query: 143 GGIANPMFKGKGPTMLQSNYAPAFPLKHQQKDMRLALALGDENAVSMPIAAAANEAFKKA 202
G +A+ K +LQ N+ P F LK+ QKD+RLA+ALGD P+AAAANE +K+A
Sbjct: 475 GQLASIFLDQKCQNILQGNFKPDFYLKYIQKDLRLAIALGDAVNHPTPMAAAANEVYKRA 534
Query: 203 RSLGLGDNDFSAVFE 217
++L DND SAV+
Sbjct: 535 KALDQSDNDMSAVYR 549
>sp|Q5ZLS7|GLYR1_CHICK Putative oxidoreductase GLYR1 OS=Gallus gallus GN=GLYR1 PE=2 SV=1
Length = 553
Score = 157 bits (396), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 77/155 (49%), Positives = 104/155 (67%)
Query: 2 EVGFLGLGIMGKAISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITI 61
++GFLGLG+MG I NLL+ G VTVWNRT KCD + GA +G +PAEV+ C IT
Sbjct: 269 KIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARLGRTPAEVVSTCDITF 328
Query: 62 GMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVS 121
++DP AA +V GVL+ I PGK Y+DMSTVD +T ++++ I S+GG FLEAPVS
Sbjct: 329 ACVSDPKAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVS 388
Query: 122 GSKQPAETGQLVILSAGEKDLGGIANPMFKGKGPT 156
G++Q + G LVIL+AG++ L + F+ G T
Sbjct: 389 GNQQLSNDGMLVILAAGDRGLYEDCSSCFQAMGKT 423
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 49/75 (65%)
Query: 143 GGIANPMFKGKGPTMLQSNYAPAFPLKHQQKDMRLALALGDENAVSMPIAAAANEAFKKA 202
G +A+ K +LQ N+ P F LK+ QKD+RLA+ALGD P+AAAANE +K+A
Sbjct: 475 GQLASIFLDQKCQNILQGNFKPDFYLKYIQKDLRLAIALGDSVNHPTPMAAAANEVYKRA 534
Query: 203 RSLGLGDNDFSAVFE 217
++L DND SAV+
Sbjct: 535 KALDQSDNDMSAVYR 549
>sp|A4FUF0|GLYR1_BOVIN Putative oxidoreductase GLYR1 OS=Bos taurus GN=GLYR1 PE=2 SV=1
Length = 553
Score = 156 bits (395), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 77/155 (49%), Positives = 104/155 (67%)
Query: 2 EVGFLGLGIMGKAISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITI 61
++GFLGLG+MG I NLL+ G VTVWNRT KCD + GA +G +PAEV+ C IT
Sbjct: 269 KIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARLGRTPAEVVSTCDITF 328
Query: 62 GMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVS 121
++DP AA +V GVL+ I PGK Y+DMSTVD +T ++++ I S+GG FLEAPVS
Sbjct: 329 ACVSDPKAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVS 388
Query: 122 GSKQPAETGQLVILSAGEKDLGGIANPMFKGKGPT 156
G++Q + G LVIL+AG++ L + F+ G T
Sbjct: 389 GNQQLSNDGMLVILAAGDRGLYEDCSSCFQAMGKT 423
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 49/75 (65%)
Query: 143 GGIANPMFKGKGPTMLQSNYAPAFPLKHQQKDMRLALALGDENAVSMPIAAAANEAFKKA 202
G +A+ K +LQ N+ P F LK+ QKD+RLA+ALGD P+AAAANE +K+A
Sbjct: 475 GQLASIFLDQKCQNILQGNFKPDFYLKYIQKDLRLAIALGDAVNHPTPMAAAANEVYKRA 534
Query: 203 RSLGLGDNDFSAVFE 217
++L DND SAV+
Sbjct: 535 KALDQSDNDMSAVYR 549
>sp|Q562D5|GLYR1_XENTR Putative oxidoreductase GLYR1 OS=Xenopus tropicalis GN=glyr1 PE=2
SV=1
Length = 534
Score = 154 bits (390), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 75/139 (53%), Positives = 98/139 (70%)
Query: 2 EVGFLGLGIMGKAISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITI 61
++GFLGLG+MG I NLL+ G VTVWNRT KCD + GA +G +PAEV+ C IT
Sbjct: 250 KIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGAHMGRTPAEVVSTCDITF 309
Query: 62 GMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVS 121
+ADP AA +V GVL+ I PGK Y+DMSTVD ET ++++ I S+GG FLEAPVS
Sbjct: 310 ACVADPKAAKDLVLGPSGVLQGIRPGKCYVDMSTVDPETVAELAQVIVSRGGRFLEAPVS 369
Query: 122 GSKQPAETGQLVILSAGEK 140
G++Q + G LVIL+AG++
Sbjct: 370 GNQQLSNDGMLVILAAGDQ 388
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 61/110 (55%), Gaps = 10/110 (9%)
Query: 113 GHFLEAPVSGSKQPAETGQ-----LVILSAGEKDLGGIANPMFKGKGPTMLQSNYAPAFP 167
G F+ G TGQ L IL+ G+ +A+ K +LQ N+ P F
Sbjct: 426 GSFMATIAEGMTLAQVTGQSQQTLLDILNQGQ-----LASIFLDQKCQNILQGNFKPDFY 480
Query: 168 LKHQQKDMRLALALGDENAVSMPIAAAANEAFKKARSLGLGDNDFSAVFE 217
LK+ QKD+RLA+ALGD P+AAAANE +K+A++L DND SAV+
Sbjct: 481 LKYIQKDLRLAIALGDSVNHPTPMAAAANEVYKRAKALDQSDNDMSAVYR 530
>sp|Q5R7T2|GLYR1_PONAB Putative oxidoreductase GLYR1 OS=Pongo abelii GN=GLYR1 PE=2 SV=2
Length = 553
Score = 152 bits (384), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/155 (48%), Positives = 103/155 (66%)
Query: 2 EVGFLGLGIMGKAISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITI 61
++GFLGLG+MG I NLL+ G VTVW+RT KCD + GA +G +PAEV+ C IT
Sbjct: 269 KIGFLGLGLMGSGIVSNLLKMGHTVTVWDRTAEKCDLFIQEGARLGRTPAEVVSTCDITF 328
Query: 62 GMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVS 121
++DP AA +V GVL+ I P K Y+DMSTVD +T ++++ I S+GG FLEAPVS
Sbjct: 329 ACVSDPKAAKDLVLGPSGVLQGIRPRKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVS 388
Query: 122 GSKQPAETGQLVILSAGEKDLGGIANPMFKGKGPT 156
G++Q + G LVIL+AG++ L + F+ G T
Sbjct: 389 GNQQLSNDGMLVILAAGDRGLYEDCSSCFQAMGKT 423
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 49/75 (65%)
Query: 143 GGIANPMFKGKGPTMLQSNYAPAFPLKHQQKDMRLALALGDENAVSMPIAAAANEAFKKA 202
G +A+ K +LQ N+ P F LK+ QKD+RLA+ALGD P+AAAANE +K+A
Sbjct: 475 GQLASIFLDQKCQNILQGNFKPDFYLKYIQKDLRLAIALGDAVNHPTPMAAAANEVYKRA 534
Query: 203 RSLGLGDNDFSAVFE 217
++L DND SAV+
Sbjct: 535 KALDQSDNDMSAVYR 549
>sp|Q922P9|GLYR1_MOUSE Putative oxidoreductase GLYR1 OS=Mus musculus GN=Glyr1 PE=2 SV=1
Length = 546
Score = 144 bits (362), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 75/155 (48%), Positives = 101/155 (65%), Gaps = 6/155 (3%)
Query: 2 EVGFLGLGIMGKAISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITI 61
++GFLGLG+MG I NLL+ G VTVWNRT K GA +G +PAEV+ C IT
Sbjct: 268 KIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEK------EGARLGRTPAEVVSTCDITF 321
Query: 62 GMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVS 121
++DP AA +V GVL+ I PGK Y+DMSTVD +T ++++ I S+GG FLEAPVS
Sbjct: 322 ACVSDPKAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVS 381
Query: 122 GSKQPAETGQLVILSAGEKDLGGIANPMFKGKGPT 156
G++Q + G LVIL+AG++ L + F+ G T
Sbjct: 382 GNQQLSNDGMLVILAAGDRGLYEDCSSCFQAMGKT 416
>sp|Q175F8|GLYR1_AEDAE Putative oxidoreductase GLYR1 homolog OS=Aedes aegypti
GN=AAEL006684 PE=3 SV=1
Length = 559
Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/142 (47%), Positives = 91/142 (64%)
Query: 1 MEVGFLGLGIMGKAISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTIT 60
++ GFLGLGIMG + NLL +G V VWNRT +KC + GA V +P++VI+ +T
Sbjct: 274 LKFGFLGLGIMGCGMVKNLLNSGHSVVVWNRTATKCRKFQEAGAEVADTPSDVIEMTDVT 333
Query: 61 IGMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPV 120
+ADP A +VF GV+ GKGY++M+ VD ETS I+ I +KGG +LEA +
Sbjct: 334 FSCVADPQVAKELVFGNCGVMSANLVGKGYVEMTGVDPETSHDIAEQIIAKGGRYLEAQI 393
Query: 121 SGSKQPAETGQLVILSAGEKDL 142
GSK AE G L+IL+AGE+ L
Sbjct: 394 QGSKNQAEEGTLIILAAGERLL 415
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 47/76 (61%)
Query: 141 DLGGIANPMFKGKGPTMLQSNYAPAFPLKHQQKDMRLALALGDENAVSMPIAAAANEAFK 200
+L +++ + KG +++ + P LKH QKD++LAL + + +PI AA+NE +K
Sbjct: 479 ELTSMSSELVMQKGNAIIKGEFPPQQALKHMQKDLKLALNMAEGLEQPLPITAASNEVYK 538
Query: 201 KARSLGLGDNDFSAVF 216
A+ LG G +D SAV+
Sbjct: 539 HAKRLGYGSHDSSAVY 554
>sp|Q7Q161|GLYR1_ANOGA Putative oxidoreductase GLYR1 homolog OS=Anopheles gambiae
GN=AGAP009949 PE=3 SV=5
Length = 566
Score = 129 bits (324), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/142 (44%), Positives = 92/142 (64%)
Query: 1 MEVGFLGLGIMGKAISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTIT 60
++ GFLGLG+MG I NL+++G V VWNR+ KC + GA V +P++V++ +T
Sbjct: 281 LKFGFLGLGVMGCGIVKNLIKSGHSVVVWNRSAHKCRKFQEVGAEVADTPSDVVEMTDVT 340
Query: 61 IGMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPV 120
++DP A +VF GV+ GKGY++M+ VD ETS I+ AI SKGG +LEA +
Sbjct: 341 YSCVSDPQVAKDMVFGNCGVMSANLAGKGYVEMTGVDPETSNDINEAIISKGGRYLEAQI 400
Query: 121 SGSKQPAETGQLVILSAGEKDL 142
GSK AE G L+IL++G++ L
Sbjct: 401 QGSKNQAEEGTLIILASGDRLL 422
Score = 63.9 bits (154), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 48/76 (63%)
Query: 141 DLGGIANPMFKGKGPTMLQSNYAPAFPLKHQQKDMRLALALGDENAVSMPIAAAANEAFK 200
+L +++ M KG +++ + LKH QKD++LAL+L D S+PI AA+NE +K
Sbjct: 486 ELTNMSSEMMLQKGNAIIKGEFPTHHALKHMQKDLKLALSLADGLEQSLPITAASNEVYK 545
Query: 201 KARSLGLGDNDFSAVF 216
A+ LG G +D SAV+
Sbjct: 546 HAKRLGYGSHDASAVY 561
>sp|Q29NG1|GLYR1_DROPS Putative oxidoreductase GLYR1 homolog OS=Drosophila pseudoobscura
pseudoobscura GN=GA18401 PE=3 SV=2
Length = 612
Score = 117 bits (294), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 88/152 (57%), Gaps = 1/152 (0%)
Query: 1 MEVGFLGLGIMGKAISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTIT 60
+ GFLGLG+MG I +L+ G KV VWNRT+ KC V GA V +P +V++ I
Sbjct: 326 LTFGFLGLGMMGSTIVKDLIYTGHKVVVWNRTIDKCQPFVEAGAEVKDTPMDVVEAADII 385
Query: 61 IGMLADPAAALSVVFDKGGVLE-QICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAP 119
++DP A +VF GVL+ + K Y++MSTVD +TS+ I I G +LEA
Sbjct: 386 FCCVSDPKGAKDLVFGNCGVLQLKDLRNKAYVEMSTVDPDTSLDIGEGIKQCNGRYLEAQ 445
Query: 120 VSGSKQPAETGQLVILSAGEKDLGGIANPMFK 151
+ GS+Q A G L+IL+ G++ + + FK
Sbjct: 446 IHGSRQEAADGMLIILAGGDRTVFEECHSCFK 477
Score = 65.1 bits (157), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 141 DLGGIANPMFKGKGPTMLQSNYAPAFPLKHQQKDMRLALALGDENAVSMPIAAAANEAFK 200
DL + +P+ KG M + ++ P PL H Q+D+RL L + + SMP+ + NE FK
Sbjct: 532 DLTSMKSPLLLAKGKEMAKGDFNPQQPLSHMQRDLRLVLNMAENLDQSMPVTSITNEVFK 591
Query: 201 KARSLGLGDNDFSAVF 216
+ LG ++D SAVF
Sbjct: 592 HTKRLGYSEHDSSAVF 607
>sp|Q8T079|GLYR1_DROME Putative oxidoreductase GLYR1 homolog OS=Drosophila melanogaster
GN=CG4747 PE=1 SV=1
Length = 602
Score = 114 bits (286), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 86/149 (57%), Gaps = 1/149 (0%)
Query: 4 GFLGLGIMGKAISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITIGM 63
GFLGLG+MG I +L+ G KV VWNRT+ KC GA V +P +V++ +
Sbjct: 319 GFLGLGMMGSTIVKDLIYTGHKVVVWNRTIDKCQPFAEAGAEVKDTPMDVVEAADVIFCC 378
Query: 64 LADPAAALSVVFDKGGVLE-QICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVSG 122
++DP A +VF GVL+ + K Y++MST+D +TS+ I I G +LEA + G
Sbjct: 379 VSDPKGAKDLVFGNCGVLQLKDLNNKAYVEMSTIDPDTSLDIGEGIKQCNGRYLEAQIHG 438
Query: 123 SKQPAETGQLVILSAGEKDLGGIANPMFK 151
S+Q A G L+IL+ G++ + + FK
Sbjct: 439 SRQEAAEGMLIILAGGDRSVFEECHSCFK 467
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%)
Query: 141 DLGGIANPMFKGKGPTMLQSNYAPAFPLKHQQKDMRLALALGDENAVSMPIAAAANEAFK 200
DL + +PM KG M + ++ P PL H Q+D+RL L + + SMP+ + NE FK
Sbjct: 522 DLTSMKSPMLLAKGKEMAKGDFNPQQPLSHMQRDLRLVLNMAENLDQSMPVTSITNEVFK 581
Query: 201 KARSLGLGDNDFSAVF 216
+ LG ++D SAVF
Sbjct: 582 HTKRLGYSEHDSSAVF 597
>sp|O34969|YFJR_BACSU Uncharacterized oxidoreductase YfjR OS=Bacillus subtilis (strain
168) GN=yfjR PE=3 SV=2
Length = 286
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 83/150 (55%)
Query: 1 MEVGFLGLGIMGKAISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTIT 60
M++ +GLG MG+ I+ N+L+ G+++TV+NRT K ++LV GA +P K I
Sbjct: 1 MKIAVIGLGNMGQPIARNVLQAGYELTVYNRTKQKTEDLVTEGAQAADTPRLAAKSADIV 60
Query: 61 IGMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPV 120
I MLAD + +V F + G+LE + +I MST+ E S K++ A KG FL APV
Sbjct: 61 ITMLADDDSVSTVTFGEDGLLEGLAENGIHISMSTISVEFSEKLAAAHAEKGQFFLAAPV 120
Query: 121 SGSKQPAETGQLVILSAGEKDLGGIANPMF 150
G A L I++AG + A P+
Sbjct: 121 LGRPDAAAKAALRIITAGPAEAKQAAKPLL 150
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 147 NPMFKGKGPTMLQSNYAPA-FPLKHQQKDMRLALALGDENAVSMPIAAAANEAFKKARSL 205
+P+++ G M + + PA F + KD LALA + ++P+A A F+
Sbjct: 212 SPVYQNYGTIMAEQKFEPAGFKMSLGLKDTNLALAAAKRVSANLPLAELAKSHFESGIEK 271
Query: 206 GLGDNDFSAVFEVVK 220
G GD D++A+ + +K
Sbjct: 272 GFGDLDWAALIKCIK 286
>sp|P0ABQ2|GARR_ECOLI 2-hydroxy-3-oxopropionate reductase OS=Escherichia coli (strain
K12) GN=garR PE=1 SV=1
Length = 294
Score = 92.8 bits (229), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 80/140 (57%)
Query: 1 MEVGFLGLGIMGKAISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTIT 60
M+VGF+GLGIMGK +S NLL+ G+ + V +R +++A GA + + ++C +
Sbjct: 1 MKVGFIGLGIMGKPMSKNLLKAGYSLVVADRNPEAIADVIAAGAETASTAKAIAEQCDVI 60
Query: 61 IGMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPV 120
I ML + V + G++E PG IDMS++ S +IS A+ +KG L+APV
Sbjct: 61 ITMLPNSPHVKEVALGENGIIEGAKPGTVLIDMSSIAPLASREISEALKAKGIDMLDAPV 120
Query: 121 SGSKQPAETGQLVILSAGEK 140
SG + A G L ++ G+K
Sbjct: 121 SGGEPKAIDGTLSVMVGGDK 140
Score = 38.1 bits (87), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 143 GGIA-NPMFKGKGPTMLQSNYAPAFPLKHQQKDMRLALALGDENAVSMPIAAAANEAFKK 201
GG+A + + K P ++ N+ P F + KD+ AL +P+ AA E +
Sbjct: 207 GGLAGSTVLDAKAPMVMDRNFKPGFRIDLHIKDLANALDTSHGVGAQLPLTAAVMEMMQA 266
Query: 202 ARSLGLGDNDFSAV 215
R+ GLG D SA+
Sbjct: 267 LRADGLGTADHSAL 280
>sp|P0ABQ3|GARR_ECOL6 2-hydroxy-3-oxopropionate reductase OS=Escherichia coli O6:H1
(strain CFT073 / ATCC 700928 / UPEC) GN=garR PE=3 SV=1
Length = 294
Score = 92.8 bits (229), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 80/140 (57%)
Query: 1 MEVGFLGLGIMGKAISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTIT 60
M+VGF+GLGIMGK +S NLL+ G+ + V +R +++A GA + + ++C +
Sbjct: 1 MKVGFIGLGIMGKPMSKNLLKAGYSLVVADRNPEAIADVIAAGAETASTAKAIAEQCDVI 60
Query: 61 IGMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPV 120
I ML + V + G++E PG IDMS++ S +IS A+ +KG L+APV
Sbjct: 61 ITMLPNSPHVKEVALGENGIIEGAKPGTVLIDMSSIAPLASREISEALKAKGIDMLDAPV 120
Query: 121 SGSKQPAETGQLVILSAGEK 140
SG + A G L ++ G+K
Sbjct: 121 SGGEPKAIDGTLSVMVGGDK 140
Score = 38.1 bits (87), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 143 GGIA-NPMFKGKGPTMLQSNYAPAFPLKHQQKDMRLALALGDENAVSMPIAAAANEAFKK 201
GG+A + + K P ++ N+ P F + KD+ AL +P+ AA E +
Sbjct: 207 GGLAGSTVLDAKAPMVMDRNFKPGFRIDLHIKDLANALDTSHGVGAQLPLTAAVMEMMQA 266
Query: 202 ARSLGLGDNDFSAV 215
R+ GLG D SA+
Sbjct: 267 LRADGLGTADHSAL 280
>sp|O34948|YKWC_BACSU Uncharacterized oxidoreductase YkwC OS=Bacillus subtilis (strain
168) GN=ykwC PE=3 SV=1
Length = 288
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 92/180 (51%), Gaps = 2/180 (1%)
Query: 3 VGFLGLGIMGKAISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITIG 62
+GF+GLG+MGK+++ ++L +G V V+ RT K + ++ GA + ++ K+ + I
Sbjct: 5 IGFIGLGVMGKSMASHILNDGHPVLVYTRTKEKAESILQKGAIWKDTVKDLSKEADVIIT 64
Query: 63 MLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVSG 122
M+ P+ V F G++E G IDM+T + KI+ A K L+APVSG
Sbjct: 65 MVGYPSDVEEVYFGSNGIIENAKEGAYLIDMTTSKPSLAKKIAEAAKEKALFALDAPVSG 124
Query: 123 SKQPAETGQLVILSAGEKDLGGIANPMFKGKGPTMLQSNYAPAFPLKHQQKDMRLALALG 182
A+ G L I+ GEK+ P+F G + PA +H + ++A+A G
Sbjct: 125 GDIGAQNGTLAIMVGGEKEAFEACMPIFSLMGENI--QYQGPAGSGQHTKMCNQIAIAAG 182
Score = 36.6 bits (83), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%)
Query: 155 PTMLQSNYAPAFPLKHQQKDMRLALALGDENAVSMPIAAAANEAFKKARSLGLGDNDFSA 214
P MLQ N+ P F +KH KDM +AL + MP + A + K + G ++ +
Sbjct: 222 PRMLQGNFEPGFYVKHFIKDMGIALEEAELMGEEMPGLSLAKSLYDKLAAQGEENSGTQS 281
Query: 215 VFEV 218
++++
Sbjct: 282 IYKL 285
>sp|Q9SZE1|3HID1_ARATH Probable 3-hydroxyisobutyrate dehydrogenase-like 1, mitochondrial
OS=Arabidopsis thaliana GN=At4g29120 PE=2 SV=1
Length = 334
Score = 85.1 bits (209), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 87/150 (58%), Gaps = 1/150 (0%)
Query: 2 EVGFLGLGIMGKAISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITI 61
++G++G G+MG+++ +L++ G+ VTV+NRT+SK L+ GA V SP V ++ +
Sbjct: 39 KIGWIGTGVMGRSMCGHLIKAGYTVTVFNRTISKAQTLIDMGANVADSPNSVAEQSDVVF 98
Query: 62 GMLADPAAALSVVFD-KGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPV 120
++ P+ V+ D K G L + G +DM+T + + +I++A + K ++APV
Sbjct: 99 TIVGYPSDVRHVLLDPKSGALSGLRQGGVLVDMTTSEPSLAEEIAKAASFKNCFSIDAPV 158
Query: 121 SGSKQPAETGQLVILSAGEKDLGGIANPMF 150
SG A+ G+L I + G++ +P+F
Sbjct: 159 SGGDLGAKNGKLSIFAGGDETTVKRLDPLF 188
>sp|Q99L13|3HIDH_MOUSE 3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Mus musculus
GN=Hibadh PE=2 SV=1
Length = 335
Score = 84.0 bits (206), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 75/139 (53%)
Query: 3 VGFLGLGIMGKAISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITIG 62
VGF+GLG MG ++ NL+++G+ + +++ C E G V SPAEV +K I
Sbjct: 41 VGFIGLGNMGNPMAKNLMKHGYPLILYDVFPDVCKEFKEAGEQVASSPAEVAEKADRIIT 100
Query: 63 MLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVSG 122
ML A+ V G+L+++ G ID ST+D S ++++ + G F++APVSG
Sbjct: 101 MLPSSMNAVEVYSGANGILKKVKKGSLLIDSSTIDPSVSKELAKEVEKMGAVFMDAPVSG 160
Query: 123 SKQPAETGQLVILSAGEKD 141
A +G L + G +D
Sbjct: 161 GVGAARSGNLTFMVGGVED 179
>sp|Q5R5E7|3HIDH_PONAB 3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Pongo abelii
GN=HIBADH PE=2 SV=1
Length = 336
Score = 80.5 bits (197), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 74/139 (53%)
Query: 3 VGFLGLGIMGKAISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITIG 62
VGF+GLG MG ++ NL+++G+ + +++ C E G V SPA+V +K I
Sbjct: 42 VGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIIT 101
Query: 63 MLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVSG 122
ML A+ G+L+++ G ID ST+D S ++++ + G F++APVSG
Sbjct: 102 MLPTSINAIEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGAVFMDAPVSG 161
Query: 123 SKQPAETGQLVILSAGEKD 141
A +G L + G +D
Sbjct: 162 GVGAARSGNLTFMVGGVED 180
>sp|P31937|3HIDH_HUMAN 3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Homo sapiens
GN=HIBADH PE=1 SV=2
Length = 336
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 74/139 (53%)
Query: 3 VGFLGLGIMGKAISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITIG 62
VGF+GLG MG ++ NL+++G+ + +++ C E G V SPA+V +K I
Sbjct: 42 VGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIIT 101
Query: 63 MLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVSG 122
ML A+ G+L+++ G ID ST+D S ++++ + G F++APVSG
Sbjct: 102 MLPTSINAIEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGAVFMDAPVSG 161
Query: 123 SKQPAETGQLVILSAGEKD 141
A +G L + G +D
Sbjct: 162 GVGAARSGNLTFMVGGVED 180
>sp|P29266|3HIDH_RAT 3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Rattus
norvegicus GN=Hibadh PE=1 SV=3
Length = 335
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 75/139 (53%)
Query: 3 VGFLGLGIMGKAISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITIG 62
VGF+GLG MG ++ NL+++G+ + +++ C E G V SPA+V +K I
Sbjct: 41 VGFIGLGNMGNPMAKNLIKHGYPLILYDVFPDVCKEFKEAGEQVASSPADVAEKADRIIT 100
Query: 63 MLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVSG 122
ML ++ V G+L+++ G ID ST+D S ++++ + G F++APVSG
Sbjct: 101 MLPSSMNSIEVYSGANGILKKVKKGSLLIDSSTIDPSVSKELAKEVEKMGAVFMDAPVSG 160
Query: 123 SKQPAETGQLVILSAGEKD 141
A +G L + G ++
Sbjct: 161 GVGAARSGNLTFMVGGVEN 179
>sp|Q2HJD7|3HIDH_BOVIN 3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Bos taurus
GN=HIBADH PE=2 SV=1
Length = 336
Score = 78.2 bits (191), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 75/139 (53%)
Query: 3 VGFLGLGIMGKAISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITIG 62
VGF+G+G MG ++ NL+++G+ + +++ C E + G V SPA+V +K I
Sbjct: 42 VGFIGVGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFLDAGEQVVSSPADVAEKADRIIT 101
Query: 63 MLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVSG 122
ML A+ G+L+++ G ID ST+D S ++++ + G F++APVSG
Sbjct: 102 MLPTSINAIEAYSGANGILKKVKKGSLLIDSSTIDPMVSKELAKEVEKMGAVFMDAPVSG 161
Query: 123 SKQPAETGQLVILSAGEKD 141
A +G L + G ++
Sbjct: 162 GVGAARSGNLTFMVGGVEE 180
>sp|P77161|GLXR_ECOLI 2-hydroxy-3-oxopropionate reductase OS=Escherichia coli (strain
K12) GN=glxR PE=2 SV=1
Length = 292
Score = 77.0 bits (188), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 88/164 (53%), Gaps = 5/164 (3%)
Query: 1 MEVGFLGLGIMGKAISMNLLRNGFKVTVWNRTLSKC-DELVAHGATVGGSPAEVIKKCTI 59
M++GF+GLGIMG +++NL R G ++ V T+ DEL++ GA + +V + I
Sbjct: 1 MKLGFIGLGIMGTPMAINLARAGHQLHVT--TIGPVADELLSLGAVSVETARQVTEASDI 58
Query: 60 TIGMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAP 119
M+ D V+F + G + GK +DMS++ + + +R + GG +L+AP
Sbjct: 59 IFIMVPDTPQVEEVLFGENGCTKASLKGKTIVDMSSISPIETKRFARQVNELGGDYLDAP 118
Query: 120 VSGSKQPAETGQLVILSAGEKDLGGIANPMFK--GKGPTMLQSN 161
VSG + A G L I+ G++ + P+F+ GK T++ N
Sbjct: 119 VSGGEIGAREGTLSIMVGGDEAVFERVKPLFELLGKNITLVGGN 162
Score = 37.0 bits (84), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 142 LGGIANP-MFKGKGPTMLQSNYAPAFPLKHQQKDMRLALALGDENAVSMPIAAAANEAFK 200
+GG A+ + + G M++ + P F + QKD+ LAL A+++P A E F
Sbjct: 205 MGGFASSRILEVHGERMIKRTFNPGFKIALHQKDLNLALQSAKALALNLPNTATCQELFN 264
Query: 201 KARSLGLGDNDFSAVFEVVK 220
+ G D SA+ + ++
Sbjct: 265 TCAANGGSQLDHSALVQALE 284
>sp|Q9L7S0|YIHU_SALTY Uncharacterized oxidoreductase YihU OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=yihU PE=3 SV=1
Length = 298
Score = 76.6 bits (187), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 114/284 (40%), Gaps = 66/284 (23%)
Query: 3 VGFLGLGIMGKAISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITIG 62
+ F+GLG MG ++ NLL+ G +++V++ LV GA SPA+ I
Sbjct: 4 IAFIGLGQMGSPMASNLLKQGHQLSVFDVNPDAVQRLVDKGAQPASSPAQATIGAEFVIT 63
Query: 63 MLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVSG 122
ML + SV+F + GV E + IDMST+ + + + SKG ++ P+
Sbjct: 64 MLPNGDLVRSVLFGEQGVCETLSREALVIDMSTIHPLQTDNLIADMQSKGFSMMDVPIGR 123
Query: 123 SKQPAETGQLVILSAGEKD--------LGGIANPMFKGKGPTM-----LQSNY------- 162
+ A TG L++L+ G + L + N + GP M L +NY
Sbjct: 124 TSDNAITGTLLLLAGGTAEQVERATPVLMAMGNELVNTGGPGMGIRVKLINNYMSIALNA 183
Query: 163 ---------------------------------APAFPLKHQQKDMR------------- 176
+P K + D+
Sbjct: 184 LSAEAAVLCEALGLSFDVALKVMSGTAAGKGHFTTTWPNKVMKGDLSPAFMIDLAHKDLG 243
Query: 177 LALALGDENAVSMPIAAAANEAFKKARSLGLGDNDFSAVFEVVK 220
+AL + ++ V MP+ AA+ E + AR+ G G D+SA+ E V+
Sbjct: 244 IALDVANQLHVPMPLGAASREVYNLARAAGRGREDWSAILEQVR 287
>sp|P0A9V9|YIHU_SHIFL Uncharacterized oxidoreductase YihU OS=Shigella flexneri GN=yihU
PE=3 SV=1
Length = 298
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 96/200 (48%), Gaps = 1/200 (0%)
Query: 3 VGFLGLGIMGKAISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITIG 62
+ F+GLG MG ++ NLL+ G ++ V++ LV GAT +PA+ K I
Sbjct: 4 IAFIGLGQMGSPMASNLLQQGHQLRVFDVNAEAVRHLVDKGATPAANPAQAAKDAEFIIT 63
Query: 63 MLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVSG 122
ML + +V+F + GV E + IDMST+ + K+ + +KG ++ PV
Sbjct: 64 MLPNGDLVRNVLFGENGVCEGLSTDALVIDMSTIHPLQTDKLIADMQAKGFSMMDVPVGR 123
Query: 123 SKQPAETGQLVILSAGEKDLGGIANPMFKGKGPTMLQSNYAPAFPLKHQQKDMRLALALG 182
+ A TG L++L+ G + A P+ G ++ + P ++ + + +++AL
Sbjct: 124 TSANAITGTLLLLAGGTAEQVERATPILMAMGSELINAG-GPGMGIRVKLINNYMSIALN 182
Query: 183 DENAVSMPIAAAANEAFKKA 202
+A + + A N F A
Sbjct: 183 ALSAEAAVLCEALNLPFDVA 202
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%)
Query: 157 MLQSNYAPAFPLKHQQKDMRLALALGDENAVSMPIAAAANEAFKKARSLGLGDNDFSAVF 216
+L + +PAF + KD+ +AL + ++ V MP+ AA+ E + +AR+ G G D+SA+
Sbjct: 224 VLSGDLSPAFMIDLAHKDLGIALDVANQLHVPMPLGAASREVYSQARAAGRGRQDWSAIL 283
Query: 217 EVVK 220
E V+
Sbjct: 284 EQVR 287
>sp|P0A9V8|YIHU_ECOLI Uncharacterized oxidoreductase YihU OS=Escherichia coli (strain
K12) GN=yihU PE=3 SV=1
Length = 298
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 96/200 (48%), Gaps = 1/200 (0%)
Query: 3 VGFLGLGIMGKAISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITIG 62
+ F+GLG MG ++ NLL+ G ++ V++ LV GAT +PA+ K I
Sbjct: 4 IAFIGLGQMGSPMASNLLQQGHQLRVFDVNAEAVRHLVDKGATPAANPAQAAKDAEFIIT 63
Query: 63 MLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVSG 122
ML + +V+F + GV E + IDMST+ + K+ + +KG ++ PV
Sbjct: 64 MLPNGDLVRNVLFGENGVCEGLSTDALVIDMSTIHPLQTDKLIADMQAKGFSMMDVPVGR 123
Query: 123 SKQPAETGQLVILSAGEKDLGGIANPMFKGKGPTMLQSNYAPAFPLKHQQKDMRLALALG 182
+ A TG L++L+ G + A P+ G ++ + P ++ + + +++AL
Sbjct: 124 TSANAITGTLLLLAGGTAEQVERATPILMAMGSELINAG-GPGMGIRVKLINNYMSIALN 182
Query: 183 DENAVSMPIAAAANEAFKKA 202
+A + + A N F A
Sbjct: 183 ALSAEAAVLCEALNLPFDVA 202
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%)
Query: 157 MLQSNYAPAFPLKHQQKDMRLALALGDENAVSMPIAAAANEAFKKARSLGLGDNDFSAVF 216
+L + +PAF + KD+ +AL + ++ V MP+ AA+ E + +AR+ G G D+SA+
Sbjct: 224 VLSGDLSPAFMIDLAHKDLGIALDVANQLHVPMPLGAASREVYSQARAAGRGRQDWSAIL 283
Query: 217 EVVK 220
E V+
Sbjct: 284 EQVR 287
>sp|Q9SUC0|3HIDH_ARATH Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial
OS=Arabidopsis thaliana GN=At4g20930 PE=2 SV=3
Length = 347
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 81/167 (48%), Gaps = 14/167 (8%)
Query: 3 VGFLGLGIMGKAISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITIG 62
VGF+GLG MG + NL+R G+KVTV + G + +P EV + + I
Sbjct: 40 VGFIGLGNMGFRMVNNLIRAGYKVTVHDINRDVMKMFTEMGVSSRETPYEVAQDSEVVIT 99
Query: 63 MLADPAAALSVVFDKGGVL---EQICPGKGYIDMSTVDHETSIKISRAITS-----KGGH 114
ML + + V G+L I P +ID ST+D +T+ KIS A+++ K +
Sbjct: 100 MLPSSSHVMDVYTGTNGLLLGENDIRPAL-FIDSSTIDPQTTRKISLAVSNCNLKEKRDN 158
Query: 115 F-----LEAPVSGSKQPAETGQLVILSAGEKDLGGIANPMFKGKGPT 156
+ L+APVSG AE G L + G +D A P+ + G T
Sbjct: 159 WEKPVMLDAPVSGGVLAAEAGTLTFMVGGPEDAYLAARPILQSMGRT 205
Score = 33.9 bits (76), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 26/57 (45%)
Query: 161 NYAPAFPLKHQQKDMRLALALGDENAVSMPIAAAANEAFKKARSLGLGDNDFSAVFE 217
+Y F K KD+ LA A +E P+ + A E +KK G DFS VF
Sbjct: 282 DYNGGFASKLMAKDLNLAAASAEEVGHKSPLISKAQEIYKKMCEEGHETKDFSCVFR 338
>sp|Q9V8M5|3HIDH_DROME Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial
OS=Drosophila melanogaster GN=CG15093 PE=2 SV=2
Length = 324
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 73/139 (52%), Gaps = 2/139 (1%)
Query: 2 EVGFLGLGIMGKAISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITI 61
+GF+GLG MG ++ NL++ G K+ V++ + CD L A GATV +E+ K I
Sbjct: 30 NIGFVGLGNMGANMASNLIKAGHKLHVFDISKPACDGLAAKGATVYAKTSELAKNSDFVI 89
Query: 62 GMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVS 121
ML + A + +D+ + + +ID ST+ + + + I++KG F++APVS
Sbjct: 90 TMLPNN-AIVDASYDE-MTADGVNKDTIFIDSSTISPDLVKSLQKKISAKGARFIDAPVS 147
Query: 122 GSKQPAETGQLVILSAGEK 140
G AE L + G +
Sbjct: 148 GGVPGAEQATLTFMVGGTE 166
Score = 35.8 bits (81), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 161 NYAPAFPLKHQQKDMRLALALGDENAVSMPIAAAANEAFKKARSLGLGDNDFSAVFEVVK 220
+YA F KD+ LA + + + +P+ + A++ ++ GLG+ DFS V++++K
Sbjct: 259 DYAGGFSSALITKDLGLASGVANASNSPIPLGSLAHKVYQSLCDKGLGNKDFSVVYDLMK 318
Query: 221 DLKRS 225
K S
Sbjct: 319 KEKFS 323
>sp|Q54CX6|3HIDH_DICDI Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial
OS=Dictyostelium discoideum GN=hibA PE=3 SV=1
Length = 321
Score = 67.8 bits (164), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 73/141 (51%), Gaps = 1/141 (0%)
Query: 3 VGFLGLGIMGKAISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITIG 62
VGF+GLG MG ++NL++ G + V++ + + L GA + SPAEV K+ + +
Sbjct: 25 VGFIGLGNMGGHQAINLIKKGHNLIVFDMSKDNMNRLKEKGAKIANSPAEVAKEADVIVT 84
Query: 63 MLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVSG 122
ML A +V + G+ + + PG +D ST+D T+ +++ L+ PVSG
Sbjct: 85 MLPASAHVKNVYCGENGIFQTVRPGTLLLDSSTIDPATAREVASIAKKHQSTMLDCPVSG 144
Query: 123 SKQPAETGQLVILSAG-EKDL 142
AE G L + G E+D
Sbjct: 145 GTGGAEAGTLTFMVGGSEQDF 165
>sp|O33730|Y1503_SHEFN Uncharacterized oxidoreductase Sfri_1503 OS=Shewanella
frigidimarina (strain NCIMB 400) GN=Sfri_1503 PE=3 SV=2
Length = 291
Score = 65.1 bits (157), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 73/140 (52%), Gaps = 1/140 (0%)
Query: 2 EVGFLGLGIMGKAISMNLLRNGFKVTVWNRTLSKCDELV-AHGATVGGSPAEVIKKCTIT 60
+V F+GLG+MG ++ +L++ G VTV+NRT +K + V +G +P + + I
Sbjct: 3 KVAFIGLGVMGFPMAGHLVKQGHDVTVYNRTGAKATQWVEQYGGKKADTPKDAAQGQDIV 62
Query: 61 IGMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPV 120
+ + VV + G++ + G +D +T + + +I+ I FL+APV
Sbjct: 63 FTCVGNDDDLRQVVLGEHGIVHGMHAGAILVDHTTASADVAREIAAYIEPLNIAFLDAPV 122
Query: 121 SGSKQPAETGQLVILSAGEK 140
SG + AE G L ++ G++
Sbjct: 123 SGGQAGAENGALTVMMGGDQ 142
>sp|Q55702|Y229_SYNY3 Uncharacterized oxidoreductase slr0229 OS=Synechocystis sp. (strain
PCC 6803 / Kazusa) GN=slr0229 PE=3 SV=1
Length = 290
Score = 64.7 bits (156), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 2/160 (1%)
Query: 2 EVGFLGLGIMGKAISMNLLRNGFKVTVWNRTLSK--CDELVAHGATVGGSPAEVIKKCTI 59
++ GLG+MG ++ NL++NG++ +NRTL + E G V S A I
Sbjct: 5 KIAVFGLGVMGSPMAQNLVKNGYQTVGYNRTLERPSVQEAAKAGVKVVTSIAVAAANADI 64
Query: 60 TIGMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAP 119
+ + D ++ GG+ E P ID ST+ + +++ + +G FL+AP
Sbjct: 65 ILTCVGDEKDVQQLILGSGGIAEYAKPQALIIDCSTIGKTAAYELATNLKLQGLRFLDAP 124
Query: 120 VSGSKQPAETGQLVILSAGEKDLGGIANPMFKGKGPTMLQ 159
V+G A G L I+ G+ A P+ K G ++
Sbjct: 125 VTGGDVGAINGTLTIMVGGDISDFEEALPVLKSIGEKIVH 164
Score = 33.1 bits (74), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Query: 155 PTMLQSNYAPAFPLKHQQKDMRLALALGDENAVSMPIAAAANEAFKKARSLGLGDNDFSA 214
P M ++++AP F +KH KD+RL + +P A F + LG D A
Sbjct: 225 PKMSEADFAPGFMVKHLLKDLRLVREAAENG--PLPGVTLAESLFTSVQLLGGEDQGSQA 282
Query: 215 VFEVVKD 221
+ ++
Sbjct: 283 IIRAYRE 289
>sp|P28811|MMSB_PSEAE 3-hydroxyisobutyrate dehydrogenase OS=Pseudomonas aeruginosa
(strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
GN=mmsB PE=2 SV=1
Length = 298
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 74/159 (46%)
Query: 2 EVGFLGLGIMGKAISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITI 61
++ FLGLG MG ++ NLL+ G +V V++ LV GA S + + + I
Sbjct: 3 DIAFLGLGNMGGPMAANLLKAGHRVNVFDLQPKAVLGLVEQGAQGADSALQCCEGAEVVI 62
Query: 62 GMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVS 121
ML S+ G+L ++ ID ST+ ET+ K++ A +KG L+APVS
Sbjct: 63 SMLPAGQHVESLYLGDDGLLARVAGKPLLIDCSTIAPETARKVAEAAAAKGLTLLDAPVS 122
Query: 122 GSKQPAETGQLVILSAGEKDLGGIANPMFKGKGPTMLQS 160
G A G L + G + A P+ + G + +
Sbjct: 123 GGVGGARAGTLSFIVGGPAEGFARARPVLENMGRNIFHA 161
>sp|O83351|6PGD_TREPA 6-phosphogluconate dehydrogenase, decarboxylating OS=Treponema
pallidum (strain Nichols) GN=gnd PE=3 SV=1
Length = 488
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 83/163 (50%), Gaps = 24/163 (14%)
Query: 2 EVGFLGLGIMGKAISMNLLRNGFKVTVWNRTLSKCDELV---AHGATVGG--SPAEVIKK 56
++GF+GL +MG+ + +N+ RNGF V V+NRT + D + AHG + G S AE++
Sbjct: 4 DIGFIGLAVMGENLVLNIERNGFSVAVFNRTTTVVDRFLAGRAHGKRITGAHSIAELVS- 62
Query: 57 CTITIGMLADPAAALSVVFDKGG-----VLEQICP----GKGYIDMSTVDHETSIKISRA 107
+LA P + +V K G V++QI P G ID ++ +I+ A
Sbjct: 63 ------LLARPRKIMLMV--KAGSAVDAVIDQILPLLEKGDLVIDGGNSHYQDTIRRMHA 114
Query: 108 ITSKGGHFLEAPVSGSKQPAETGQLVILSAGEKDLGGIANPMF 150
+ + G HF+ VSG ++ A G ++ G + +P+F
Sbjct: 115 LEAAGIHFIGTGVSGGEEGALRGP-SLMPGGSAQAWPLVSPIF 156
>sp|Q0QLF5|HMGD_EUBBA 2-(hydroxymethyl)glutarate dehydrogenase OS=Eubacterium barkeri
GN=Hgd PE=1 SV=1
Length = 301
Score = 61.2 bits (147), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 73/135 (54%)
Query: 1 MEVGFLGLGIMGKAISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTIT 60
+++GF+GLG MGK +++NLL+ G V ++ + +VA GA + +V I
Sbjct: 5 IKIGFIGLGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVAQGAQACENNQKVAAASDII 64
Query: 61 IGMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPV 120
L + +V+ GGVL G +DMS+V +++K+++ KG +++APV
Sbjct: 65 FTSLPNAGIVETVMNGPGGVLSACKAGTVIVDMSSVSPSSTLKMAKVAAEKGIDYVDAPV 124
Query: 121 SGSKQPAETGQLVIL 135
SG + AE G L I+
Sbjct: 125 SGGTKGAEAGTLTIM 139
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%)
Query: 157 MLQSNYAPAFPLKHQQKDMRLALALGDENAVSMPIAAAANEAFKKARSLGLGDNDFSAVF 216
++ ++A F + Q KD+ LAL G E V +P+ A A + F+ R++GLG D SAV
Sbjct: 227 IMSGDFAGGFAMDLQHKDLGLALEAGKEGNVPLPMTAMATQIFEGGRAMGLGREDMSAVI 286
Query: 217 EVVKDL 222
+V + +
Sbjct: 287 KVWEQM 292
>sp|Q9XTI0|3HIDH_CAEEL Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial
OS=Caenorhabditis elegans GN=B0250.5 PE=3 SV=1
Length = 299
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 68/138 (49%)
Query: 4 GFLGLGIMGKAISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITIGM 63
GF+GLG MG ++ NL++NG K+ V++ + E A G V PA++ I +
Sbjct: 5 GFIGLGNMGGHMARNLIKNGKKLIVYDVNKAVVQEFKAEGCEVAAHPADIAAASKEIITV 64
Query: 64 LADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVSGS 123
L +V + G+ + I PG +D ST+D S+++++A +++AP+SG
Sbjct: 65 LPSSPHVKAVYQGEAGIFKTIQPGTLCMDSSTIDQIVSLEVAQAAALLKAEYIDAPISGG 124
Query: 124 KQPAETGQLVILSAGEKD 141
A+ L + D
Sbjct: 125 VTGAQQATLTFMVGAGND 142
>sp|Q949M8|3HID3_ARATH Probable 3-hydroxyisobutyrate dehydrogenase-like 3, mitochondrial
OS=Arabidopsis thaliana GN=At1g71180 PE=2 SV=1
Length = 318
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 67/141 (47%)
Query: 14 AISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITIGMLADPAAALSV 73
A+ +++ G+ VTV+ R L K +L GA + SP E+ + + ++ + S+
Sbjct: 48 AMVSHIIAAGYSVTVYARDLRKTKDLQTKGARIANSPKELAEMSDVVFTIVGNFNDVRSL 107
Query: 74 VFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVSGSKQPAETGQLV 133
+ GVL + PG +DM++ + +I + ++APVSG A G L
Sbjct: 108 LLGDDGVLSGLTPGGVTVDMTSSKPGLAREIHAEARRRNCWAVDAPVSGGDAGAREGTLG 167
Query: 134 ILSAGEKDLGGIANPMFKGKG 154
I + G+ ++ +P+ K G
Sbjct: 168 IFAGGDSEIVEWLSPVMKNIG 188
>sp|Q9C991|3HID2_ARATH Probable 3-hydroxyisobutyrate dehydrogenase-like 2, mitochondrial
OS=Arabidopsis thaliana GN=At1g71170 PE=2 SV=1
Length = 299
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 65/141 (46%)
Query: 14 AISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITIGMLADPAAALSV 73
A+ ++L G+ VTV+ R L K +L G SP E+ + + ++ + S+
Sbjct: 27 AMVSHILAAGYSVTVYARDLRKTKDLQTKGGRTANSPKELGEMSDVVFTIVGNSNDVRSL 86
Query: 74 VFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVSGSKQPAETGQLV 133
+ GVL + PG +DM++ + +I + ++APVSG A G+L
Sbjct: 87 LLGDDGVLSGLKPGGVTVDMTSSKPGLAREIYAEARRRDCWAVDAPVSGGDAGAREGKLT 146
Query: 134 ILSAGEKDLGGIANPMFKGKG 154
I + G+ ++ P+ K G
Sbjct: 147 IFAGGDSEIVEWLAPVMKTMG 167
>sp|Q9LI00|6PGD1_ORYSJ 6-phosphogluconate dehydrogenase, decarboxylating 1 OS=Oryza sativa
subsp. japonica GN=G6PGH1 PE=2 SV=1
Length = 480
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 62/139 (44%), Gaps = 13/139 (9%)
Query: 2 EVGFLGLGIMGKAISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSP----------A 51
+G GL +MG+ +++N+ GF ++V+NRT SK DE V G P
Sbjct: 5 RIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVQRAKVEGNLPVYGFHDPASFV 64
Query: 52 EVIKKCTITIGMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSK 111
I+K + I ++ A + LEQ G ID +E + + +A+ +
Sbjct: 65 NSIQKPRVVIMLVKAGAPVDQTIATLAAHLEQ---GDCIIDGGNEWYENTERREKAMEER 121
Query: 112 GGHFLEAPVSGSKQPAETG 130
G +L VSG ++ A G
Sbjct: 122 GLLYLGMGVSGGEEGARNG 140
>sp|Q94KU1|6PGD1_SPIOL 6-phosphogluconate dehydrogenase, decarboxylating 1 OS=Spinacia
oleracea GN=pgdC PE=1 SV=1
Length = 483
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 13/138 (9%)
Query: 3 VGFLGLGIMGKAISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSP----------AE 52
+G GL +MG+ +++N+ GF ++V+NRT SK DE V G P
Sbjct: 7 IGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVN 66
Query: 53 VIKKCTITIGMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKG 112
I+K + I ++ A + + LE+ G ID +E + + +A+ KG
Sbjct: 67 SIQKPRVIIMLVKAGAPVDATIKTLSAYLEK---GDCIIDGGNEWYENTERREKAMEEKG 123
Query: 113 GHFLEAPVSGSKQPAETG 130
+L VSG ++ A G
Sbjct: 124 LLYLGMGVSGGEEGARNG 141
>sp|P41576|6PGD_KLEPN 6-phosphogluconate dehydrogenase, decarboxylating OS=Klebsiella
pneumoniae GN=gnd PE=3 SV=2
Length = 468
Score = 50.8 bits (120), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 78/157 (49%), Gaps = 11/157 (7%)
Query: 2 EVGFLGLGIMGKAISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITI 61
++G +G+ +MG+ +++N+ G+ V+V+NR+ K +E++A P +++ +
Sbjct: 5 QIGVVGMAVMGRNLALNIESRGYTVSVFNRSREKTEEVIAENTGKKLVPYYTVQEF---V 61
Query: 62 GMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVD-------HETSIKISRAITSKGGH 114
L P L +V G I K Y+D + + +I+ +R ++++G +
Sbjct: 62 ESLETPRRILLMVKAGAGTDSAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFN 121
Query: 115 FLEAPVSGSKQPAETGQLVILSAGEKDLGGIANPMFK 151
F+ VSG ++ A G I+ G+K+ + P+ K
Sbjct: 122 FIGTGVSGGEEGALKGP-SIMPGGQKEAYELVAPILK 157
>sp|P14062|6PGD_SALTY 6-phosphogluconate dehydrogenase, decarboxylating OS=Salmonella
typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=gnd
PE=3 SV=1
Length = 468
Score = 50.8 bits (120), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 76/156 (48%), Gaps = 11/156 (7%)
Query: 2 EVGFLGLGIMGKAISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITI 61
++G +G+ +MG+ +++N+ G+ V+V+NR+ K +E++A P +K+ +
Sbjct: 5 QIGVVGMAVMGRNLALNIESRGYTVSVFNRSREKTEEVIAENPGKKLVPYYTVKEF---V 61
Query: 62 GMLADPAAALSVVFDKGGVLEQICPGKGY-------IDMSTVDHETSIKISRAITSKGGH 114
L P L +V G I K Y ID + +I+ +R ++++G +
Sbjct: 62 ESLETPRRILLMVKAGAGTDAAIDSLKPYLEKGDIIIDGGNTFFQDTIRRNRELSAEGFN 121
Query: 115 FLEAPVSGSKQPAETGQLVILSAGEKDLGGIANPMF 150
F+ VSG ++ A G I+ G+KD + P+
Sbjct: 122 FIGTGVSGGEEGALKGP-SIMPGGQKDAYELVAPIL 156
>sp|Q46888|YGBJ_ECOLI Uncharacterized oxidoreductase YgbJ OS=Escherichia coli (strain
K12) GN=ygbJ PE=3 SV=1
Length = 302
Score = 50.8 bits (120), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 68/141 (48%), Gaps = 5/141 (3%)
Query: 1 MEVGFLGLGIMGKAISMNLLRNGFKVTVWNRTLSK--CDELVAHGAT-VGGSPAEVIKKC 57
VG +GLG MG +++ +R G + W L+ C L GA V + A +K
Sbjct: 7 FHVGIVGLGSMGMGAALSYVRAGL--STWGADLNSNACATLKEAGACGVSDNAATFAEKL 64
Query: 58 TITIGMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLE 117
+ ++ + A V+F + GV + + PG + ST+ + +I+ A+ L+
Sbjct: 65 DALLVLVVNAAQVKQVLFGETGVAQHLKPGTAVMVSSTIASADAQEIATALAGFDLEMLD 124
Query: 118 APVSGSKQPAETGQLVILSAG 138
APVSG A G++ ++++G
Sbjct: 125 APVSGGAVKAANGEMTVMASG 145
>sp|P37754|6PGD9_ECOLX 6-phosphogluconate dehydrogenase, decarboxylating OS=Escherichia
coli GN=gnd PE=3 SV=1
Length = 468
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 78/157 (49%), Gaps = 11/157 (7%)
Query: 2 EVGFLGLGIMGKAISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITI 61
++G +G+ +MG+ +++N+ G+ V+V+NR+ K +E++A P +++ +
Sbjct: 5 QIGVVGMAVMGRNLALNIESRGYTVSVFNRSREKTEEVIAENPGKKLVPYYTVQEF---V 61
Query: 62 GMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVD-------HETSIKISRAITSKGGH 114
L P L +V G I K Y+D + + +I+ +R ++++G +
Sbjct: 62 ESLETPRRILLMVKAGSGTDSAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFN 121
Query: 115 FLEAPVSGSKQPAETGQLVILSAGEKDLGGIANPMFK 151
F+ VSG ++ A G I+ G+K+ + P+ K
Sbjct: 122 FIGTGVSGGEEGALKGP-SIMPGGQKEAYELVAPILK 157
>sp|P37756|6PGD_SHIFL 6-phosphogluconate dehydrogenase, decarboxylating OS=Shigella
flexneri GN=gnd PE=3 SV=1
Length = 468
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 78/156 (50%), Gaps = 11/156 (7%)
Query: 2 EVGFLGLGIMGKAISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITI 61
++G +G+ +MG+ +++N+ G+ V+++NR+ K +E++A +P +K+ +
Sbjct: 5 QIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLAPYYTVKEF---V 61
Query: 62 GMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVD-------HETSIKISRAITSKGGH 114
L P L +V G I K Y+D + + +I+ +R ++++G +
Sbjct: 62 ESLETPRRILLMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFN 121
Query: 115 FLEAPVSGSKQPAETGQLVILSAGEKDLGGIANPMF 150
F+ VSG ++ A G I+ G+K+ + P+
Sbjct: 122 FIGTGVSGGEEGALKGP-SIMPGGQKEAYELVAPIL 156
>sp|P00350|6PGD_ECOLI 6-phosphogluconate dehydrogenase, decarboxylating OS=Escherichia
coli (strain K12) GN=gnd PE=1 SV=2
Length = 468
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 77/156 (49%), Gaps = 11/156 (7%)
Query: 2 EVGFLGLGIMGKAISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITI 61
++G +G+ +MG+ +++N+ G+ V+++NR+ K +E++A P +K+ +
Sbjct: 5 QIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLVPYYTVKEF---V 61
Query: 62 GMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVD-------HETSIKISRAITSKGGH 114
L P L +V G I K Y+D + + +I+ +R ++++G +
Sbjct: 62 ESLETPRRILLMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFN 121
Query: 115 FLEAPVSGSKQPAETGQLVILSAGEKDLGGIANPMF 150
F+ VSG ++ A G I+ G+K+ + P+
Sbjct: 122 FIGTGVSGGEEGALKGP-SIMPGGQKEAYELVAPIL 156
>sp|P80859|6PGD2_BACSU 6-phosphogluconate dehydrogenase, decarboxylating 2 OS=Bacillus
subtilis (strain 168) GN=yqjI PE=1 SV=4
Length = 469
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 74/154 (48%), Gaps = 5/154 (3%)
Query: 2 EVGFLGLGIMGKAISMNLLRNGFKVTVWNRTLSKCDELV--AHGATVGG--SPAEVIKKC 57
++G +GL +MGK +++N+ GF V+V+NR+ SK +E + A G V G S E ++
Sbjct: 5 QIGVIGLAVMGKNLALNIESRGFSVSVYNRSSSKTEEFLQEAKGKNVVGTYSIEEFVQSL 64
Query: 58 TITIGMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLE 117
+L A + +L + ID ++ + + ++ + G HF+
Sbjct: 65 ETPRKILLMVKAGTATDATIQSLLPHLEKDDILIDGGNTYYKDTQRRNKELAESGIHFIG 124
Query: 118 APVSGSKQPAETGQLVILSAGEKDLGGIANPMFK 151
VSG ++ A G I+ G+K+ + P+ +
Sbjct: 125 TGVSGGEEGALKGP-SIMPGGQKEAHELVKPILE 157
>sp|Q9FWA3|6GPD3_ARATH 6-phosphogluconate dehydrogenase, decarboxylating 3 OS=Arabidopsis
thaliana GN=At3g02360 PE=2 SV=1
Length = 486
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 62/138 (44%), Gaps = 13/138 (9%)
Query: 3 VGFLGLGIMGKAISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSP----------AE 52
+G GL +MG+ +++N+ GF ++V+NRT SK DE V G P +
Sbjct: 8 IGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGNLPLYGFHDPESFVK 67
Query: 53 VIKKCTITIGMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKG 112
I+K + I ++ + + LE+ G +D +E + + +A+ G
Sbjct: 68 SIQKPRVIIMLVKAGSPVDQTIKTLSAYLEK---GDCIVDGGNEWYENTERREKAVAENG 124
Query: 113 GHFLEAPVSGSKQPAETG 130
+L VSG ++ A G
Sbjct: 125 FLYLGMGVSGGEEGARNG 142
>sp|P71825|Y770_MYCTU Uncharacterized oxidoreductase Rv0770/MT0794 OS=Mycobacterium
tuberculosis GN=Rv0770 PE=3 SV=1
Length = 295
Score = 47.8 bits (112), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 67/140 (47%), Gaps = 1/140 (0%)
Query: 2 EVGFLGLGIMGKAISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITI 61
+G++GLG G ++ LL +TV++ + V GAT S ++V + I+I
Sbjct: 9 RLGYIGLGNQGAPMAKRLLDWPGGLTVFDVRVEAMAPFVEGGATAAASVSDVAEADIISI 68
Query: 62 GMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVS 121
+ D A SV+ G+ PG ST+ T++ ++ + +G H ++APVS
Sbjct: 69 TVFDD-AQVSSVITADNGLATHAKPGTIVAIHSTIADTTAVDLAEKLKPQGIHIVDAPVS 127
Query: 122 GSKQPAETGQLVILSAGEKD 141
G A G+L ++ + +
Sbjct: 128 GGAAAAAKGELAVMVGADDE 147
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.134 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,636,405
Number of Sequences: 539616
Number of extensions: 3358341
Number of successful extensions: 9790
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 141
Number of HSP's successfully gapped in prelim test: 54
Number of HSP's that attempted gapping in prelim test: 9577
Number of HSP's gapped (non-prelim): 237
length of query: 226
length of database: 191,569,459
effective HSP length: 113
effective length of query: 113
effective length of database: 130,592,851
effective search space: 14756992163
effective search space used: 14756992163
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)