Query 027264
Match_columns 226
No_of_seqs 235 out of 2779
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 11:52:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027264.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027264hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i9v_9 NADH-quinone oxidoreduc 99.8 8.6E-20 2.9E-24 144.9 5.4 141 76-216 2-148 (182)
2 3eun_A Ferredoxin; electron tr 99.3 6.4E-13 2.2E-17 91.9 2.2 56 122-187 3-64 (82)
3 2fgo_A Ferredoxin; allochromat 99.3 1.5E-12 5.2E-17 89.9 4.1 56 122-187 3-64 (82)
4 1rgv_A Ferredoxin; electron tr 99.3 1.2E-12 4.2E-17 89.9 3.5 56 122-187 3-64 (80)
5 2fdn_A Ferredoxin; electron tr 99.3 1.4E-12 4.8E-17 83.1 2.6 50 124-183 5-54 (55)
6 7fd1_A FD1, protein (7-Fe ferr 99.3 1.7E-12 5.8E-17 94.1 2.6 56 122-187 3-60 (106)
7 1bc6_A 7-Fe ferredoxin; electr 99.2 2.7E-12 9.1E-17 87.6 2.7 54 122-185 3-58 (77)
8 2zvs_A Uncharacterized ferredo 99.2 2.5E-12 8.5E-17 89.5 2.2 56 122-187 3-65 (85)
9 1xer_A Ferredoxin; electron tr 99.2 1.9E-12 6.5E-17 93.1 1.3 65 120-185 38-102 (103)
10 1dax_A Ferredoxin I; electron 99.2 1.7E-12 5.9E-17 85.2 0.6 59 121-185 5-63 (64)
11 1h98_A Ferredoxin; electron tr 99.2 2.5E-12 8.4E-17 88.0 1.3 54 122-185 3-58 (78)
12 1f2g_A Ferredoxin II; electron 99.2 4.4E-12 1.5E-16 81.5 2.3 53 121-183 3-57 (58)
13 1rof_A Ferredoxin; electron tr 99.1 1.3E-11 4.3E-16 79.6 2.6 54 122-184 5-59 (60)
14 1jb0_C Photosystem I iron-sulf 99.1 4.5E-12 1.5E-16 86.7 0.4 62 122-185 5-66 (80)
15 1dwl_A Ferredoxin I; electron 99.1 1.3E-11 4.4E-16 79.2 2.6 54 122-183 4-58 (59)
16 3gyx_B Adenylylsulfate reducta 99.1 8E-12 2.7E-16 97.9 1.5 60 122-188 4-68 (166)
17 1jnr_B Adenylylsulfate reducta 99.1 9.1E-12 3.1E-16 96.0 1.6 62 122-190 5-71 (150)
18 2v2k_A Ferredoxin; iron, trans 99.1 1.2E-11 4.1E-16 89.3 1.6 54 122-185 3-58 (105)
19 1iqz_A Ferredoxin; iron-sulfer 99.0 2.2E-11 7.7E-16 83.8 -0.3 64 121-185 5-70 (81)
20 1hfe_L Protein (Fe-only hydrog 99.0 2.1E-10 7.2E-15 102.3 3.3 55 120-183 28-83 (421)
21 1sj1_A Ferredoxin; thermostabi 98.9 6.4E-11 2.2E-15 77.7 -1.7 55 121-184 5-64 (66)
22 3c8y_A Iron hydrogenase 1; dit 98.9 2.9E-10 9.9E-15 105.1 0.1 67 120-186 140-210 (574)
23 2vpz_B NRFC protein; oxidoredu 98.8 1.2E-09 4E-14 87.7 2.1 52 124-184 55-108 (195)
24 2c42_A Pyruvate-ferredoxin oxi 98.8 1.5E-09 5E-14 107.8 1.7 68 121-188 682-768 (1231)
25 2ivf_B Ethylbenzene dehydrogen 98.7 1.7E-09 5.9E-14 94.0 1.2 23 122-144 146-170 (352)
26 1ti6_B Pyrogallol hydroxytrans 98.7 2E-09 6.8E-14 90.7 1.0 54 121-186 93-159 (274)
27 2ivf_B Ethylbenzene dehydrogen 98.7 1.9E-09 6.4E-14 93.7 0.8 56 121-188 178-242 (352)
28 2vpz_B NRFC protein; oxidoredu 98.7 4.1E-09 1.4E-13 84.5 1.6 59 121-192 84-151 (195)
29 3i9v_3 NADH-quinone oxidoreduc 98.6 5.9E-09 2E-13 99.6 1.6 62 120-185 174-239 (783)
30 1q16_B Respiratory nitrate red 98.6 7.2E-09 2.5E-13 93.8 1.5 56 122-185 179-236 (512)
31 1h0h_B Formate dehydrogenase ( 98.6 3.3E-09 1.1E-13 86.2 -0.7 56 121-188 102-168 (214)
32 1gte_A Dihydropyrimidine dehyd 98.6 5.6E-09 1.9E-13 102.5 -0.2 59 120-187 946-1008(1025)
33 1kqf_B FDH-N beta S, formate d 98.6 4.9E-09 1.7E-13 89.2 -0.7 52 122-185 128-188 (294)
34 3mm5_B Sulfite reductase, diss 98.6 8.6E-09 2.9E-13 90.2 0.8 57 120-184 200-259 (366)
35 1kqf_B FDH-N beta S, formate d 98.6 9.1E-09 3.1E-13 87.5 0.7 55 122-185 95-152 (294)
36 1ti6_B Pyrogallol hydroxytrans 98.5 1.9E-08 6.3E-13 84.8 2.0 54 122-185 63-118 (274)
37 1q16_B Respiratory nitrate red 98.5 1.3E-08 4.6E-13 92.1 0.3 52 121-184 211-271 (512)
38 3or1_B Sulfite reductase beta; 98.5 3.5E-08 1.2E-12 87.0 1.5 63 120-184 211-276 (386)
39 2wdq_B Succinate dehydrogenase 98.4 2.3E-08 7.9E-13 82.3 -0.5 63 120-182 142-222 (238)
40 3vr8_B Iron-sulfur subunit of 98.4 5.5E-09 1.9E-13 88.1 -5.3 108 72-179 123-252 (282)
41 1h0h_B Formate dehydrogenase ( 98.4 5.1E-08 1.7E-12 79.2 0.4 56 122-185 67-129 (214)
42 1kf6_B Fumarate reductase iron 98.3 8.8E-08 3E-12 79.0 -0.1 60 121-180 142-218 (243)
43 3mm5_A Sulfite reductase, diss 98.3 1.4E-07 4.6E-12 83.8 0.6 43 130-182 260-302 (418)
44 2h88_B Succinate dehydrogenase 98.3 1.5E-07 5.2E-12 78.1 0.8 60 121-180 152-229 (252)
45 2bs2_B Quinol-fumarate reducta 98.1 1.8E-07 6.3E-12 77.0 -1.5 58 123-180 147-222 (241)
46 2pa8_D DNA-directed RNA polyme 98.0 7.5E-07 2.6E-11 74.6 -0.5 60 128-197 174-236 (265)
47 2gmh_A Electron transfer flavo 98.0 1.1E-06 3.8E-11 81.2 0.2 57 123-184 508-571 (584)
48 3or1_A Sulfite reductase alpha 97.9 1.4E-06 4.7E-11 77.5 -0.4 42 131-182 278-319 (437)
49 3cf4_A Acetyl-COA decarboxylas 97.9 8.2E-07 2.8E-11 84.8 -2.6 58 123-182 413-471 (807)
50 3j16_B RLI1P; ribosome recycli 97.8 3.6E-06 1.2E-10 78.2 0.4 54 122-183 11-72 (608)
51 2v2k_A Ferredoxin; iron, trans 97.2 0.00013 4.4E-09 51.9 2.0 58 122-187 34-91 (105)
52 3bk7_A ABC transporter ATP-bin 97.1 0.00013 4.4E-09 67.8 1.9 54 122-183 24-86 (607)
53 1dax_A Ferredoxin I; electron 97.1 0.00014 4.9E-09 46.6 1.4 27 158-185 3-29 (64)
54 1rgv_A Ferredoxin; electron tr 97.1 0.0002 6.7E-09 48.2 1.9 25 161-185 3-27 (80)
55 2fgo_A Ferredoxin; allochromat 97.0 0.00021 7.1E-09 48.3 1.9 25 161-185 3-27 (82)
56 3eun_A Ferredoxin; electron tr 97.0 0.00019 6.4E-09 48.7 1.4 26 161-186 3-28 (82)
57 2zvs_A Uncharacterized ferredo 97.0 0.0002 7E-09 48.8 1.2 25 161-185 3-27 (85)
58 2fdn_A Ferredoxin; electron tr 96.9 0.00038 1.3E-08 43.2 1.7 23 163-185 5-27 (55)
59 1iqz_A Ferredoxin; iron-sulfer 96.8 0.00037 1.3E-08 47.0 1.4 26 158-184 3-28 (81)
60 1jb0_C Photosystem I iron-sulf 96.7 0.00026 8.9E-09 47.3 -0.1 25 160-184 4-28 (80)
61 1xer_A Ferredoxin; electron tr 96.7 0.0004 1.4E-08 48.9 0.8 27 158-184 37-63 (103)
62 1rof_A Ferredoxin; electron tr 96.6 0.00083 2.8E-08 42.0 1.7 25 159-184 3-27 (60)
63 7fd1_A FD1, protein (7-Fe ferr 96.5 0.00083 2.8E-08 47.7 1.7 26 122-147 34-59 (106)
64 1f2g_A Ferredoxin II; electron 96.5 0.00092 3.1E-08 41.7 1.5 23 160-184 3-25 (58)
65 1sj1_A Ferredoxin; thermostabi 96.5 0.00088 3E-08 42.8 1.4 26 158-184 3-28 (66)
66 1dwl_A Ferredoxin I; electron 96.4 0.0012 4.1E-08 41.1 1.7 22 123-144 37-58 (59)
67 1bc6_A 7-Fe ferredoxin; electr 96.3 0.001 3.6E-08 44.2 1.2 25 161-185 3-29 (77)
68 1h98_A Ferredoxin; electron tr 96.2 0.00089 3E-08 44.7 0.3 25 161-185 3-29 (78)
69 3i9v_9 NADH-quinone oxidoreduc 96.1 0.0011 3.8E-08 51.4 0.5 24 161-184 48-71 (182)
70 1jnr_B Adenylylsulfate reducta 95.9 0.0021 7.2E-08 48.8 1.1 26 160-185 4-34 (150)
71 3gyx_B Adenylylsulfate reducta 95.8 0.0022 7.7E-08 49.5 1.1 26 160-185 3-33 (166)
72 1hfe_L Protein (Fe-only hydrog 95.5 0.0042 1.5E-07 55.0 1.6 27 159-185 28-54 (421)
73 2c42_A Pyruvate-ferredoxin oxi 95.1 0.0074 2.5E-07 60.3 2.0 54 125-183 651-705 (1231)
74 3or1_B Sulfite reductase beta; 94.6 0.007 2.4E-07 53.0 0.3 27 120-146 251-277 (386)
75 3pm9_A Putative oxidoreductase 94.5 0.039 1.3E-06 49.5 5.1 73 18-99 383-471 (476)
76 3j16_B RLI1P; ribosome recycli 94.2 0.011 3.6E-07 54.9 0.7 25 122-146 50-74 (608)
77 3i9v_3 NADH-quinone oxidoreduc 93.9 0.013 4.5E-07 55.8 0.8 22 126-147 219-240 (783)
78 3mm5_B Sulfite reductase, diss 93.9 0.015 5.1E-07 50.6 1.0 26 120-145 234-259 (366)
79 3c8y_A Iron hydrogenase 1; dit 93.8 0.015 5.2E-07 53.5 1.0 26 121-146 184-209 (574)
80 2gmh_A Electron transfer flavo 92.9 0.021 7.3E-07 52.5 0.4 31 120-150 546-576 (584)
81 2wdq_B Succinate dehydrogenase 90.9 0.06 2.1E-06 43.6 0.8 23 160-182 143-165 (238)
82 3mm5_A Sulfite reductase, diss 90.8 0.048 1.6E-06 48.2 0.2 24 120-143 279-302 (418)
83 1kf6_B Fumarate reductase iron 90.6 0.043 1.5E-06 44.6 -0.3 22 161-182 143-164 (243)
84 2h88_B Succinate dehydrogenase 89.9 0.081 2.8E-06 43.3 0.8 22 161-182 153-174 (252)
85 1gte_A Dihydropyrimidine dehyd 89.8 0.085 2.9E-06 51.7 1.0 28 158-185 945-975 (1025)
86 2bs2_B Quinol-fumarate reducta 89.3 0.077 2.6E-06 43.0 0.3 21 162-182 147-167 (241)
87 1e8g_A Vanillyl-alcohol oxidas 88.9 0.11 3.9E-06 47.5 1.0 74 18-99 454-542 (560)
88 3or1_A Sulfite reductase alpha 87.8 0.11 3.6E-06 46.2 0.1 23 120-142 296-318 (437)
89 3bk7_A ABC transporter ATP-bin 86.0 0.19 6.5E-06 46.5 0.8 23 122-144 64-86 (607)
90 2pa8_D DNA-directed RNA polyme 84.2 0.24 8.3E-06 40.8 0.5 24 122-146 198-221 (265)
91 1wvf_A 4-cresol dehydrogenase 84.0 0.27 9.2E-06 44.4 0.8 74 18-99 423-508 (520)
92 3kwl_A Uncharacterized protein 78.0 0.37 1.3E-05 43.6 -0.5 15 163-179 191-205 (514)
93 3cf4_A Acetyl-COA decarboxylas 76.9 0.55 1.9E-05 44.9 0.3 22 123-144 451-472 (807)
94 3vr8_B Iron-sulfur subunit of 76.5 0.51 1.7E-05 39.3 -0.0 19 163-181 179-197 (282)
95 2vdc_G Glutamate synthase [NAD 68.4 0.45 1.5E-05 42.2 -2.4 20 123-142 18-39 (456)
96 1t3q_A Quinoline 2-oxidoreduct 56.9 1.4 4.7E-05 33.7 -1.2 54 124-177 101-155 (168)
97 1igr_A Insulin-like growth fac 47.3 4.1 0.00014 36.4 0.1 19 126-144 217-241 (478)
98 2dtg_E Insulin receptor; IR ec 37.9 11 0.00037 36.1 1.4 16 127-142 225-246 (897)
99 2uuu_A Alkyldihydroxyacetoneph 28.7 10 0.00036 34.6 -0.4 21 79-99 559-579 (584)
100 2hr7_A Insulin receptor; hormo 26.5 16 0.00056 32.5 0.5 16 127-142 225-246 (486)
101 2kmz_A Tumor necrosis factor r 22.3 27 0.00093 20.7 0.7 13 122-134 17-29 (53)
No 1
>3i9v_9 NADH-quinone oxidoreductase subunit 9; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_8* 2fug_9* 3iam_9* 3ias_9* 3m9s_9*
Probab=99.78 E-value=8.6e-20 Score=144.88 Aligned_cols=141 Identities=43% Similarity=0.831 Sum_probs=93.8
Q ss_pred hhHHHHHHHHHHHHHhcCCcceecCccccCCCCCCccCccccccCCCccccccccccchhccccccccchhhhhccC---
Q 027264 76 FLTEMVRGLGLTLKYFFDKKVTINYPFEKGPLSPRFRGEHALRRYPTGEERCIACKLCEAVCPAQAITIEAEEREDG--- 152 (226)
Q Consensus 76 ~~~~~~~~l~~~~~~~f~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~Ci~Cg~C~~~CP~~ai~~~~~~~~~~--- 152 (226)
.+.++++++..+++++|.+..+..||..+....+++++.+.+.....+.++|++||.|+.+||++++.+........
T Consensus 2 ~l~~~~~~l~~~~~~~~~~~~t~~yp~~~~~~~~~~~g~~~~~~~~~d~~~Ci~C~~C~~~CP~~ai~~~~~~~~~~~~~ 81 (182)
T 3i9v_9 2 TLKALAQSLGITLKYLFSKPVTVPYPDAPVALKPRFHGRHVLTRHPNGLEKCIGCSLCAAACPAYAIYVEPAENDPENPV 81 (182)
T ss_dssp ------------------------CCSSCEECCTTCCCSEEECBCTTSCBSCCCCCHHHHHCTTCCEEEEEECCCSSSCS
T ss_pred CHHHHHHHHHHHHHHHcCCCcceECCCCCCCCCcccCCeEeeccCCCCCccCcccccchhhCCcccEEeecccccccccc
Confidence 35678899999999999999999999888788888998887776666788999999999999999987654321110
Q ss_pred ---CccccccccCCCCCCcchhhhhcCcccccccCCCcccchhcHHHhhcCHHHHhhcCCCchHHHH
Q 027264 153 ---SRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEYSTETHEELLYDKEKLLENGDRWETEIA 216 (226)
Q Consensus 153 ---~~~~~~~~~d~~~C~~Cg~Cv~~CP~~Ai~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 216 (226)
........++.+.|++||.|+.+||++||.++..++.....+..++++...+.....++...+.
T Consensus 82 ~~~~~~~~~~~~~~~~C~~C~~C~~~CP~~Ai~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~ 148 (182)
T 3i9v_9 82 SAGERYAKVYEINMLRCIFCGLCEEACPTGAIVLGYDFEMADYEYSDLVYGKEDMLVDVVGTKPQRR 148 (182)
T ss_dssp SSSSCEEEEEEEETTTCCCCCHHHHHCSSSCEEECSCCCCCBSSGGGGEECHHHHBTTCCSCHHHHH
T ss_pred cccccccceeecCCCcCcChhChhhhCCccceEecCccccccccHHHHhcCHHHHhhcccCCCCCeE
Confidence 1111234567789999999999999999999999999999999999999888888888776654
No 2
>3eun_A Ferredoxin; electron transport, [4Fe-4S] cluster, 4Fe-4S, iron, iron-sulfur, metal-binding, transport; 1.05A {Allochromatium vinosum} SCOP: d.58.1.1 PDB: 1blu_A 3exy_A
Probab=99.29 E-value=6.4e-13 Score=91.87 Aligned_cols=56 Identities=41% Similarity=0.886 Sum_probs=46.8
Q ss_pred CccccccccccchhccccccccchhhhhccCCccccccccCCCCCCcch------hhhhcCcccccccCCCc
Q 027264 122 TGEERCIACKLCEAVCPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCG------FCQEACPVDAIVEGPNF 187 (226)
Q Consensus 122 ~~~~~Ci~Cg~C~~~CP~~ai~~~~~~~~~~~~~~~~~~~d~~~C~~Cg------~Cv~~CP~~Ai~~~~~~ 187 (226)
++.++|++||.|+.+||.++|.+... .+.++...|++|+ .|+.+||++||.+...+
T Consensus 3 ~~~~~C~~C~~C~~~CP~~ai~~~~~----------~~~i~~~~C~~C~~~~~~~~C~~~CP~~Ai~~~~~~ 64 (82)
T 3eun_A 3 MITDECINCDVCEPECPNGAISQGDE----------TYVIEPSLCTECVGHYETSQCVEVCPVDAIIKDPSH 64 (82)
T ss_dssp EECTTCCCCCTTGGGCTTCCEEECSS----------SEEECGGGCCTTTTTCSSCHHHHHCTTCCEEECGGG
T ss_pred EeCCCCcCccchHHHCChhheEcCCC----------ceEEchhhcCCCCCCCCccHHHHhCCccceEEcCCC
Confidence 45689999999999999999987442 2456778899999 99999999999987653
No 3
>2fgo_A Ferredoxin; allochromatium vinosum, [4Fe-4S] cluster, reduction potential, iron binding protein electron transport; 1.32A {Pseudomonas aeruginosa}
Probab=99.29 E-value=1.5e-12 Score=89.85 Aligned_cols=56 Identities=39% Similarity=0.756 Sum_probs=46.6
Q ss_pred CccccccccccchhccccccccchhhhhccCCccccccccCCCCCCcch------hhhhcCcccccccCCCc
Q 027264 122 TGEERCIACKLCEAVCPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCG------FCQEACPVDAIVEGPNF 187 (226)
Q Consensus 122 ~~~~~Ci~Cg~C~~~CP~~ai~~~~~~~~~~~~~~~~~~~d~~~C~~Cg------~Cv~~CP~~Ai~~~~~~ 187 (226)
++.++|++||.|+.+||+++|.+... .+.++...|++|| .|+.+||++||.+....
T Consensus 3 ~~~~~C~~C~~C~~~CP~~ai~~~~~----------~~~~~~~~C~~C~~~~~~~~C~~~CP~~Ai~~~~~~ 64 (82)
T 2fgo_A 3 KITDDCINCDVCEPECPNGAISQGEE----------IYVIDPNLCTECVGHYDEPQCQQVCPVDCIPLDDAN 64 (82)
T ss_dssp CCCTTCCCCCTTGGGCTTCCEEECSS----------SEEECTTTCCTTTTTCSSCHHHHHCTTCCCCBCTTS
T ss_pred eeCCCCCChhhHHHHCChhccCCCCC----------eEEEEchhCccCCCcCCCCHhHhhCCcccEEccCCC
Confidence 34679999999999999999986532 2456778999999 99999999999987643
No 4
>1rgv_A Ferredoxin; electron transport; 2.90A {Thauera aromatica} SCOP: d.58.1.1
Probab=99.29 E-value=1.2e-12 Score=89.91 Aligned_cols=56 Identities=39% Similarity=0.809 Sum_probs=46.6
Q ss_pred CccccccccccchhccccccccchhhhhccCCccccccccCCCCCCcch------hhhhcCcccccccCCCc
Q 027264 122 TGEERCIACKLCEAVCPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCG------FCQEACPVDAIVEGPNF 187 (226)
Q Consensus 122 ~~~~~Ci~Cg~C~~~CP~~ai~~~~~~~~~~~~~~~~~~~d~~~C~~Cg------~Cv~~CP~~Ai~~~~~~ 187 (226)
++.++|++||.|+.+||+++|.+... .+.++...|++|+ .|+.+||++||.+....
T Consensus 3 ~~~~~C~~C~~C~~~CP~~ai~~~~~----------~~~~~~~~C~~C~~~~~~~~C~~~CP~~Ai~~~~~~ 64 (80)
T 1rgv_A 3 YINDDCTACDACVEECPNEAITPGDP----------IYVIDPTKCSECVGAFDEPQCRLVCPADCIPDNPDY 64 (80)
T ss_dssp CCCSCCCCCCTTTTTCTTCCEECCSS----------SCEECTTTCCTTTTTCSSCHHHHHCSSCCCCBCGGG
T ss_pred EeCCCCcChhhHHHHcChhccCcCCC----------eeEEcchhCcCCCCcCCccHHHHhcCcccEEecCCc
Confidence 45679999999999999999986532 2456778999999 99999999999976543
No 5
>2fdn_A Ferredoxin; electron transport, iron-sulfur, 4Fe-4S; 0.94A {Clostridium acidurici} SCOP: d.58.1.1 PDB: 1fdn_A 1fca_A 1clf_A 1dur_A
Probab=99.27 E-value=1.4e-12 Score=83.07 Aligned_cols=50 Identities=50% Similarity=1.064 Sum_probs=42.5
Q ss_pred cccccccccchhccccccccchhhhhccCCccccccccCCCCCCcchhhhhcCccccccc
Q 027264 124 EERCIACKLCEAVCPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVE 183 (226)
Q Consensus 124 ~~~Ci~Cg~C~~~CP~~ai~~~~~~~~~~~~~~~~~~~d~~~C~~Cg~Cv~~CP~~Ai~~ 183 (226)
.++|++||.|+++||.+++....+ .+.++.+.|++||.|+.+||++||.+
T Consensus 5 ~~~C~~C~~C~~~CP~~ai~~~~~----------~~~~~~~~C~~C~~C~~~CP~~ai~~ 54 (55)
T 2fdn_A 5 NEACISCGACEPECPVNAISSGDD----------RYVIDADTCIDCGACAGVCPVDAPVQ 54 (55)
T ss_dssp CTTCCCCCTTGGGCTTCCEECCSS----------SCEECTTTCCCCCHHHHTCTTCCEEE
T ss_pred cccCcChhhHHHHCCccccCcCCC----------EEEeccccCcChhChHHHccccceec
Confidence 578999999999999999876532 23567789999999999999999874
No 6
>7fd1_A FD1, protein (7-Fe ferredoxin I); electron transport, iron-sulfur; 1.30A {Azotobacter vinelandii} SCOP: d.58.1.2 PDB: 1fda_A 1fdb_A 1fer_A 1axq_A 5fd1_A 6fdr_A 6fd1_A 7fdr_A 1frh_A 1fri_A 1fdd_A 1frl_A 1d3w_A 1frm_A 1frx_A 1g6b_A 1pc4_A 1frj_A 2fd2_A 1fd2_A ...
Probab=99.25 E-value=1.7e-12 Score=94.07 Aligned_cols=56 Identities=30% Similarity=0.706 Sum_probs=46.8
Q ss_pred Cccccccccc--cchhccccccccchhhhhccCCccccccccCCCCCCcchhhhhcCcccccccCCCc
Q 027264 122 TGEERCIACK--LCEAVCPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNF 187 (226)
Q Consensus 122 ~~~~~Ci~Cg--~C~~~CP~~ai~~~~~~~~~~~~~~~~~~~d~~~C~~Cg~Cv~~CP~~Ai~~~~~~ 187 (226)
++.++|++|| .|+.+||.++|..... ...++...|++||.|+.+||++||.+...+
T Consensus 3 ~~~~~C~~C~~~~C~~~CP~~ai~~~~~----------~~~i~~~~C~~Cg~C~~~CP~~ai~~~~~~ 60 (106)
T 7fd1_A 3 VVTDNCIKCKYTDCVEVCPVDCFYEGPN----------FLVIHPDECIDCALCEPECPAQAIFSEDEV 60 (106)
T ss_dssp EECGGGTTTCCCHHHHHCTTCCEEECSS----------CEEECTTTCCCCCTTGGGCTTCCEEEGGGC
T ss_pred ECccccCCccCcHHHHHcCccceEcCCC----------cEEECcccCCChhhhHHhCCChhhhccccC
Confidence 4568999999 9999999999876542 245777899999999999999999877653
No 7
>1bc6_A 7-Fe ferredoxin; electron transport, iron-sulfur; NMR {Bacillus schlegelii} SCOP: d.58.1.2 PDB: 1bd6_A 1bqx_A 1bwe_A
Probab=99.23 E-value=2.7e-12 Score=87.55 Aligned_cols=54 Identities=39% Similarity=0.771 Sum_probs=45.0
Q ss_pred Cccccccc--cccchhccccccccchhhhhccCCccccccccCCCCCCcchhhhhcCcccccccCC
Q 027264 122 TGEERCIA--CKLCEAVCPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGP 185 (226)
Q Consensus 122 ~~~~~Ci~--Cg~C~~~CP~~ai~~~~~~~~~~~~~~~~~~~d~~~C~~Cg~Cv~~CP~~Ai~~~~ 185 (226)
++.++|++ ||.|+++||+++|.+... ...++.+.|++||.|+.+||++||.+..
T Consensus 3 i~~~~C~~c~C~~C~~~Cp~~ai~~~~~----------~~~~~~~~C~~Cg~C~~~CP~~ai~~~~ 58 (77)
T 1bc6_A 3 VITEPCIGTKDASCVEVCPVDCIHEGED----------QYYIDPDVCIDCGACEAVCPVSAIYHED 58 (77)
T ss_dssp ECCSTTTTCCCCSSTTTCTTCCEEECSS----------SEEECTTTCCSCCSHHHHSGGGSSEETT
T ss_pred EeCccCCCCCcchhHHhcccccEEeCCC----------cEEECcccCcCccCCHhhcCccceEecC
Confidence 35678999 999999999999976431 2456788999999999999999998654
No 8
>2zvs_A Uncharacterized ferredoxin-like protein YFHL; electron transport, [4Fe-4S] clusters, iron-SULF clusters, reduction potential; 1.65A {Escherichia coli}
Probab=99.22 E-value=2.5e-12 Score=89.47 Aligned_cols=56 Identities=38% Similarity=0.942 Sum_probs=46.4
Q ss_pred CccccccccccchhccccccccchhhhhccCCccccccccCCCCCCcch------hhhhcCcc-cccccCCCc
Q 027264 122 TGEERCIACKLCEAVCPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCG------FCQEACPV-DAIVEGPNF 187 (226)
Q Consensus 122 ~~~~~Ci~Cg~C~~~CP~~ai~~~~~~~~~~~~~~~~~~~d~~~C~~Cg------~Cv~~CP~-~Ai~~~~~~ 187 (226)
++.++|++||.|+.+||+++|.+... .+.++...|++|| .|+.+||+ +||.+....
T Consensus 3 ~~~~~C~~C~~C~~~CP~~ai~~~~~----------~~~~~~~~C~~C~~~~~~~~C~~~CP~~~Ai~~~~~~ 65 (85)
T 2zvs_A 3 LITKKCINCDMCEPECPNEAISMGDH----------IYEINSDKCTECVGHYETPTCQKVCPIPNTIVKDPAH 65 (85)
T ss_dssp EECTTCCCCCTTTTTCTTCCEECCSS----------SCEECGGGCCTTTTTCSSCHHHHHCSSCCEEECTTSC
T ss_pred EeCCcCcChhHHHHHCchhccCcCCC----------ceEEeChhccCCCCcCCccHhhHhCcCCCCEEecCCC
Confidence 34578999999999999999987532 2356778899999 99999999 999987653
No 9
>1xer_A Ferredoxin; electron transport, iron-sulfur, duplication; 2.00A {Sulfolobus tokodaii str} SCOP: d.58.1.3 PDB: 2vkr_A
Probab=99.22 E-value=1.9e-12 Score=93.07 Aligned_cols=65 Identities=25% Similarity=0.492 Sum_probs=47.2
Q ss_pred CCCccccccccccchhccccccccchhhhhccCCccccccccCCCCCCcchhhhhcCcccccccCC
Q 027264 120 YPTGEERCIACKLCEAVCPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGP 185 (226)
Q Consensus 120 ~~~~~~~Ci~Cg~C~~~CP~~ai~~~~~~~~~~~~~~~~~~~d~~~C~~Cg~Cv~~CP~~Ai~~~~ 185 (226)
+.++.++|++||.|+.+||.+++.......... .......++.+.|++||.|+.+||++||.+..
T Consensus 38 ~~id~~~C~~Cg~C~~~CP~~ai~~~~~~~~~~-~~~~~~~~~~~~C~~Cg~C~~~CP~~Ai~~~~ 102 (103)
T 1xer_A 38 VGVDFDLCIADGSCINACPVNVFQWYDTPGHPA-SEKKADPVNEQACIFCMACVNVCPVAAIDVKP 102 (103)
T ss_dssp EEEETTTCCCCCHHHHHCTTCCCEEEECTTCSS-CSEEEECTTGGGCCCCCHHHHHCTTCCEEECC
T ss_pred EEEehhhCCChhhHHHHcCccCeecccccCccc-cccceeecCcccccChhhHHHhccccceEecC
Confidence 346778999999999999999987654211100 00112345677899999999999999998654
No 10
>1dax_A Ferredoxin I; electron transport, electron-transfer protein, 4Fe-4S cluster; NMR {Desulfovibrio africanus} SCOP: d.58.1.4 PDB: 1dfd_A 1fxr_A
Probab=99.21 E-value=1.7e-12 Score=85.18 Aligned_cols=59 Identities=22% Similarity=0.404 Sum_probs=43.0
Q ss_pred CCccccccccccchhccccccccchhhhhccCCccccccccCCCCCCcchhhhhcCcccccccCC
Q 027264 121 PTGEERCIACKLCEAVCPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGP 185 (226)
Q Consensus 121 ~~~~~~Ci~Cg~C~~~CP~~ai~~~~~~~~~~~~~~~~~~~d~~~C~~Cg~Cv~~CP~~Ai~~~~ 185 (226)
.++.++|++||.|+.+|| +++.+.... +.. .....+...|++|+.|+.+||++||.+.+
T Consensus 5 ~id~~~C~~Cg~C~~~CP-~~~~~~~~~---~~~--~~~~~~~~~C~~C~~C~~~CP~~Ai~~~~ 63 (64)
T 1dax_A 5 YVDQDECIACESCVEIAP-GAFAMDPEI---EKA--YVKDVEGASQEEVEEAMDTCPVQCIHWED 63 (64)
T ss_dssp EECSTTCCSCCHHHHHCT-TTEEECSSS---SSE--EECCGGGSCHHHHHHHHHHSSSCCEECCC
T ss_pred EEccccCCCchHHHHhCC-ccEeEcCCC---CEE--EEecCCCcchhHHHHHHHhCCHhhEeeec
Confidence 356789999999999999 887664320 000 01112357899999999999999998754
No 11
>1h98_A Ferredoxin; electron transport, thermophilic, iron-sulfur, azotobacter, hydrogen bonds, stability, high resolution; 1.64A {Thermus aquaticus} SCOP: d.58.1.2
Probab=99.20 E-value=2.5e-12 Score=88.00 Aligned_cols=54 Identities=37% Similarity=0.728 Sum_probs=45.1
Q ss_pred Cccccccc--cccchhccccccccchhhhhccCCccccccccCCCCCCcchhhhhcCcccccccCC
Q 027264 122 TGEERCIA--CKLCEAVCPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGP 185 (226)
Q Consensus 122 ~~~~~Ci~--Cg~C~~~CP~~ai~~~~~~~~~~~~~~~~~~~d~~~C~~Cg~Cv~~CP~~Ai~~~~ 185 (226)
++.++|++ ||.|+++||+++|.+... .+.++...|++||.|+.+||++||.+..
T Consensus 3 i~~~~C~~c~C~~C~~~CP~~ai~~~~~----------~~~~~~~~C~~C~~C~~~CP~~Ai~~~~ 58 (78)
T 1h98_A 3 VICEPCIGVKDQSCVEVCPVECIYDGGD----------QFYIHPEECIDCGACVPACPVNAIYPEE 58 (78)
T ss_dssp EECGGGTTTCCCHHHHHCTTCCEEECSS----------SEEECTTTCCCCCTHHHHCTTCCEEEGG
T ss_pred EEchhCCCCCcChhhhhcCccceEcCCC----------EEEECcccCCcHhHHHHhCCccceEecc
Confidence 45689999 999999999999987531 2456778999999999999999998644
No 12
>1f2g_A Ferredoxin II; electron transport, FDII desulfovibrio gigas; NMR {Desulfovibrio gigas} SCOP: d.58.1.4 PDB: 1fxd_A
Probab=99.20 E-value=4.4e-12 Score=81.46 Aligned_cols=53 Identities=23% Similarity=0.557 Sum_probs=40.8
Q ss_pred CCccccccccccchhccccccccchhhhhccCCccccccccC--CCCCCcchhhhhcCccccccc
Q 027264 121 PTGEERCIACKLCEAVCPAQAITIEAEEREDGSRRTTRYDID--MTKCIYCGFCQEACPVDAIVE 183 (226)
Q Consensus 121 ~~~~~~Ci~Cg~C~~~CP~~ai~~~~~~~~~~~~~~~~~~~d--~~~C~~Cg~Cv~~CP~~Ai~~ 183 (226)
.++ ++|++||.|+++||. ++.+..... ...++ ...|++||.|+.+||++||.+
T Consensus 3 ~id-~~C~~C~~C~~~CP~-~~~~~~~~~--------~~~~~~~~~~C~~C~~C~~~CP~~Ai~~ 57 (58)
T 1f2g_A 3 EVN-DDCMACEACVEICPD-VFEMNEEGD--------KAVVINPDSDLDCVEEAIDSCPAEAIVR 57 (58)
T ss_dssp BCT-TTCCCCCHHHHHCTT-TEEECSSSS--------SEEESCTTCCSTHHHHHHHTCSSCCCBC
T ss_pred EEC-CcCccchHHHHhCCc-cEEECCCCc--------EEEeCCCccchHHHHHHHhhCChhhEEe
Confidence 467 899999999999998 665432110 12344 678999999999999999975
No 13
>1rof_A Ferredoxin; electron transport, iron-sulfur; NMR {Thermotoga maritima} SCOP: d.58.1.4 PDB: 1vjw_A
Probab=99.15 E-value=1.3e-11 Score=79.57 Aligned_cols=54 Identities=22% Similarity=0.538 Sum_probs=40.8
Q ss_pred CccccccccccchhccccccccchhhhhccCCcccccccc-CCCCCCcchhhhhcCcccccccC
Q 027264 122 TGEERCIACKLCEAVCPAQAITIEAEEREDGSRRTTRYDI-DMTKCIYCGFCQEACPVDAIVEG 184 (226)
Q Consensus 122 ~~~~~Ci~Cg~C~~~CP~~ai~~~~~~~~~~~~~~~~~~~-d~~~C~~Cg~Cv~~CP~~Ai~~~ 184 (226)
++.++|++||.|+.+||. ++.+..... .... +.+.|..||.|+.+||++||.+.
T Consensus 5 i~~~~C~~C~~C~~~Cp~-~~~~~~~~~--------~~~~~~~~~c~~C~~C~~~CP~~Ai~~~ 59 (60)
T 1rof_A 5 VDADACIGCGVCENLCPD-VFQLGDDGK--------AKVLQPETDLPCAKDAADSCPTGAISVE 59 (60)
T ss_dssp ECTTTCCSCCSSTTTCTT-TBCCCSSSC--------CCBSCSSCCSTTHHHHHHHCTTCCEECC
T ss_pred EchhhCCCChHHHHhCcH-HHeECCCCC--------EeecCchhhHHHHHHHHHhCCHhHEEEe
Confidence 567899999999999996 565432211 1122 36789999999999999999864
No 14
>1jb0_C Photosystem I iron-sulfur center; membrane protein, multiprotein-pigment complex, photosynthes; HET: CL1 PQN BCR LHG LMG; 2.50A {Synechococcus elongatus} SCOP: d.58.1.2 PDB: 3pcq_C* 1k0t_A 2wsc_C* 2wse_C* 2wsf_C* 3lw5_C* 2o01_C*
Probab=99.15 E-value=4.5e-12 Score=86.68 Aligned_cols=62 Identities=21% Similarity=0.504 Sum_probs=44.5
Q ss_pred CccccccccccchhccccccccchhhhhccCCccccccccCCCCCCcchhhhhcCcccccccCC
Q 027264 122 TGEERCIACKLCEAVCPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGP 185 (226)
Q Consensus 122 ~~~~~Ci~Cg~C~~~CP~~ai~~~~~~~~~~~~~~~~~~~d~~~C~~Cg~Cv~~CP~~Ai~~~~ 185 (226)
++.++|++||.|+.+||++++.+....... ........+.+.|++||.|+.+||++||.+..
T Consensus 5 ~~~~~C~~Cg~C~~~CP~~a~~~~~~~~~~--~~~~~~~~~~~~C~~Cg~C~~~CP~~ai~~~~ 66 (80)
T 1jb0_C 5 KIYDTCIGCTQCVRACPTDVLEMVPWDGCK--AGQIASSPRTEDCVGCKRCETACPTDFLSIRV 66 (80)
T ss_dssp EEETTCCCCCHHHHHCTTCCCEEEECSSST--TSEEEECTTGGGCCCCCHHHHHCCSSSCSEEE
T ss_pred ccCCcCcChhHHHHHCCccccccccccccc--ccccccCCCCCcCcCcCChhhhCCCCccEeee
Confidence 456899999999999999998765421100 00001234567899999999999999998643
No 15
>1dwl_A Ferredoxin I; electron transfer, model, heteronuclear docking; HET: HEC; NMR {Desulfomicrobium norvegicum} SCOP: i.4.1.1
Probab=99.15 E-value=1.3e-11 Score=79.25 Aligned_cols=54 Identities=26% Similarity=0.528 Sum_probs=40.4
Q ss_pred CccccccccccchhccccccccchhhhhccCCccccccc-cCCCCCCcchhhhhcCccccccc
Q 027264 122 TGEERCIACKLCEAVCPAQAITIEAEEREDGSRRTTRYD-IDMTKCIYCGFCQEACPVDAIVE 183 (226)
Q Consensus 122 ~~~~~Ci~Cg~C~~~CP~~ai~~~~~~~~~~~~~~~~~~-~d~~~C~~Cg~Cv~~CP~~Ai~~ 183 (226)
++.++|++||.|+.+||. ++.+.... +. ... ++.+.|+.||.|+.+||++||.+
T Consensus 4 i~~~~C~~C~~C~~~Cp~-~~~~~~~~---~~----~~~~~~~~~c~~C~~C~~~CP~~Ai~~ 58 (59)
T 1dwl_A 4 IDHEECIGCESCVELCPE-VFAMIDGE---EK----AMVTAPDSTAECAQDAIDACPVEAISK 58 (59)
T ss_dssp ESSCCCSSCCGGGGTSTT-TEEEEECS---SC----EEESCTTCCCGGGGTGGGGSTTCCEEE
T ss_pred EChhhCcChhHHHHHCCH-HheecCCC---Cc----EEEecChhhhhHHHHHHHhCCHhhEEc
Confidence 566899999999999994 66551111 10 111 46788999999999999999975
No 16
>3gyx_B Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=99.14 E-value=8e-12 Score=97.89 Aligned_cols=60 Identities=27% Similarity=0.680 Sum_probs=48.5
Q ss_pred Cccccccccc-----cchhccccccccchhhhhccCCccccccccCCCCCCcchhhhhcCcccccccCCCcc
Q 027264 122 TGEERCIACK-----LCEAVCPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFE 188 (226)
Q Consensus 122 ~~~~~Ci~Cg-----~C~~~CP~~ai~~~~~~~~~~~~~~~~~~~d~~~C~~Cg~Cv~~CP~~Ai~~~~~~~ 188 (226)
++.++|++|| .|+.+||.++|.+..... ..+.++.+.|++||.|+.+||++||.+....+
T Consensus 4 id~~~C~gC~~c~~~~C~~~CP~~ai~~~~~~~-------~~~~~d~~~C~~Cg~Cv~~CP~~Ai~~~~~~~ 68 (166)
T 3gyx_B 4 VDPSKCDGCKGGEKTACMYICPNDLMILDPEEM-------KAFNQEPEACWECYSCIKICPQGAITARPYAD 68 (166)
T ss_dssp ECTTTCCCCCSSSCCHHHHHCTTSCEEEETTTT-------EEEESCGGGCCCCCHHHHHCSSCCEEECCCTT
T ss_pred EcchhcCCCCCCCcchhHHhCCccccEEecCCc-------eeEecCcccCcccChHhHhCCccceEEecccc
Confidence 5678999999 999999999998765321 12346778999999999999999998776544
No 17
>1jnr_B Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.1.5 PDB: 1jnz_B* 2fja_B* 2fjb_B* 2fjd_B* 2fje_B*
Probab=99.13 E-value=9.1e-12 Score=95.99 Aligned_cols=62 Identities=32% Similarity=0.709 Sum_probs=49.1
Q ss_pred Cccccccccc-----cchhccccccccchhhhhccCCccccccccCCCCCCcchhhhhcCcccccccCCCcccc
Q 027264 122 TGEERCIACK-----LCEAVCPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEYS 190 (226)
Q Consensus 122 ~~~~~Ci~Cg-----~C~~~CP~~ai~~~~~~~~~~~~~~~~~~~d~~~C~~Cg~Cv~~CP~~Ai~~~~~~~~~ 190 (226)
++.++|++|| .|+.+||.++|.+..... ..+.++.+.|++||.|+.+||++||.+....++.
T Consensus 5 vd~~~C~~C~~~~~~~C~~~CP~~ai~~~~~~~-------~~~~id~~~C~~Cg~Cv~~CP~~AI~~~~~~~~~ 71 (150)
T 1jnr_B 5 VNPEKCDGCKALERTACEYICPNDLMTLDKEKM-------KAYNREPDMCWECYSCVKMCPQGAIDVRGYVDYS 71 (150)
T ss_dssp ECTTTCCSCCSSSSCHHHHHCTTSCEEEETTTT-------EEEESCGGGCCCCCHHHHHCTTCCEEECCCTTTC
T ss_pred ECcccCCCCCCcccccchhhcCccCeEEecCCc-------eeeeeCcccCcCHhHHHHhCCccceEecCcchhh
Confidence 5678999999 999999999998754321 1235677889999999999999999877654433
No 18
>2v2k_A Ferredoxin; iron, transport, iron-sulfur, mycobacterium tuberculosis, Fe cluster, metal-binding, electron transfer, transport; 1.6A {Mycobacterium smegmatis}
Probab=99.12 E-value=1.2e-11 Score=89.33 Aligned_cols=54 Identities=33% Similarity=0.672 Sum_probs=44.9
Q ss_pred Ccccccccc--ccchhccccccccchhhhhccCCccccccccCCCCCCcchhhhhcCcccccccCC
Q 027264 122 TGEERCIAC--KLCEAVCPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGP 185 (226)
Q Consensus 122 ~~~~~Ci~C--g~C~~~CP~~ai~~~~~~~~~~~~~~~~~~~d~~~C~~Cg~Cv~~CP~~Ai~~~~ 185 (226)
++.++|++| |.|+.+||+++|..... ...++.+.|++||.|+.+||++||.+..
T Consensus 3 i~~~~C~~C~c~~C~~~CP~~ai~~~~~----------~~~~~~~~C~~Cg~C~~~CP~~Ai~~~~ 58 (105)
T 2v2k_A 3 VIAEPCVDVKDKACIEECPVDCIYEGAR----------MLYIHPDECVDCGACEPVCPVEAIYYED 58 (105)
T ss_dssp EECGGGTTTCCCHHHHHCTTCCEEECSS----------CEEECTTTCCCCCCSGGGCTTCCEEEGG
T ss_pred EecccCCCCCcChhhhhcCccccCcCCC----------cEEEeCCcCcchhhHHHhCCccCEEecC
Confidence 456899988 99999999999976432 2456788999999999999999998654
No 19
>1iqz_A Ferredoxin; iron-sulfer protein, ultlahigh resolution analysis, geometry of [4Fe-4S] cluster, electron transport; 0.92A {Bacillus thermoproteolyticus} SCOP: d.58.1.4 PDB: 1ir0_A 1wtf_A*
Probab=99.03 E-value=2.2e-11 Score=83.75 Aligned_cols=64 Identities=20% Similarity=0.263 Sum_probs=42.5
Q ss_pred CCccccccccccchhccccccccchhhhhccCCc--cccccccCCCCCCcchhhhhcCcccccccCC
Q 027264 121 PTGEERCIACKLCEAVCPAQAITIEAEEREDGSR--RTTRYDIDMTKCIYCGFCQEACPVDAIVEGP 185 (226)
Q Consensus 121 ~~~~~~Ci~Cg~C~~~CP~~ai~~~~~~~~~~~~--~~~~~~~d~~~C~~Cg~Cv~~CP~~Ai~~~~ 185 (226)
.++.++|++||.|+.+|| +++.++......... ......++.+.|..|+.|+.+||++||.+..
T Consensus 5 ~vd~~~CigCg~C~~~CP-~~~~~~~~g~~~~~~~~~~~~~~~~~~~c~~C~~C~~~CP~~AI~~~~ 70 (81)
T 1iqz_A 5 IVDKETCIACGACGAAAP-DIYDYDEDGIAYVTLDDNQGIVEVPDILIDDMMDAFEGCPTDSIKVAD 70 (81)
T ss_dssp EECTTTCCCCSHHHHHCT-TTEEECTTSCEEETTTTTSSCSCCCGGGHHHHHHHHHHCTTCCEEEES
T ss_pred EEecccCcccChhhHhCc-hheeeCCCCeEEEeccCccccCCCCHHHHHHHHHHHHhCCHhHEEEec
Confidence 467789999999999999 676654221100000 0000123346799999999999999998654
No 20
>1hfe_L Protein (Fe-only hydrogenase (E.C.1.18.99.1) (larger subunit)); hydrogene metabolism, periplasm; 1.60A {Desulfovibrio vulgaris subsp} SCOP: c.96.1.1 d.58.1.5 PDB: 1e08_A* 1gx7_A*
Probab=98.96 E-value=2.1e-10 Score=102.26 Aligned_cols=55 Identities=40% Similarity=0.831 Sum_probs=45.0
Q ss_pred CCCccccccccccchhccccccccchhhhhccCCcccccccc-CCCCCCcchhhhhcCccccccc
Q 027264 120 YPTGEERCIACKLCEAVCPAQAITIEAEEREDGSRRTTRYDI-DMTKCIYCGFCQEACPVDAIVE 183 (226)
Q Consensus 120 ~~~~~~~Ci~Cg~C~~~CP~~ai~~~~~~~~~~~~~~~~~~~-d~~~C~~Cg~Cv~~CP~~Ai~~ 183 (226)
+.++.++|++||.|+.+||.++|...... ...+ +...|+.||.|+.+||++||..
T Consensus 28 i~~d~~kCi~Cg~C~~~CP~~ai~~~~~~---------~~~i~~~~~C~~Cg~C~~~CP~~Ai~~ 83 (421)
T 1hfe_L 28 VQIDEAKCIGCDTCSQYCPTAAIFGEMGE---------PHSIPHIEACINCGQCLTHCPENAIYE 83 (421)
T ss_dssp EEECTTTCCCCCHHHHHCTTCCCBCCTTS---------CCBCCCGGGCCCCCTTGGGCTTCCEEE
T ss_pred EEECcccCCCccHHHHhcCcCceeccccc---------ceeecChhhCCchhhHHHhhCcCCccc
Confidence 44678899999999999999998754321 1234 6788999999999999999987
No 21
>1sj1_A Ferredoxin; thermostability, iron-sulfur cluster, hexammine cobalt(III), electron transport; HET: NCO; 1.50A {Pyrococcus furiosus} SCOP: d.58.1.4 PDB: 1siz_A* 2z8q_A 3pni_A
Probab=98.90 E-value=6.4e-11 Score=77.69 Aligned_cols=55 Identities=24% Similarity=0.448 Sum_probs=39.6
Q ss_pred CCccccccccccchhccccccccchhhhhccCCccccccccC---CC--CCCcchhhhhcCcccccccC
Q 027264 121 PTGEERCIACKLCEAVCPAQAITIEAEEREDGSRRTTRYDID---MT--KCIYCGFCQEACPVDAIVEG 184 (226)
Q Consensus 121 ~~~~~~Ci~Cg~C~~~CP~~ai~~~~~~~~~~~~~~~~~~~d---~~--~C~~Cg~Cv~~CP~~Ai~~~ 184 (226)
.++.++|++||.|+.+||. ++.+..... ...++ .. .|..|+.|+.+||++||.+.
T Consensus 5 ~id~~~C~~C~~C~~~Cp~-~~~~~~~~~--------~~~~~~~~~~~~~c~~c~~C~~~CP~~Ai~~~ 64 (66)
T 1sj1_A 5 SVDQDTCIGDAICASLCPD-VFEMNDEGK--------AQPKVEVIEDEELYNCAKEAMEACPVSAITIE 64 (66)
T ss_dssp EECTTTCCCCCHHHHHCTT-TEEECTTSC--------EEESCSCBCCHHHHHHHHHHHHHCTTCCEEEE
T ss_pred EECcccCcCchHHHHhCCc-eEEECCCCc--------eeecccCCCcHHHHHHHHHHHhhCCHhhEEEe
Confidence 3567899999999999995 776542211 11122 23 47899999999999999864
No 22
>3c8y_A Iron hydrogenase 1; dithiomethylether, H-cluster, iron-sulfur binding, oxidoreductase; HET: HCN; 1.39A {Clostridium pasteurianum} SCOP: c.96.1.1 d.15.4.2 d.58.1.5 PDB: 1c4c_A* 1c4a_A* 1feh_A*
Probab=98.85 E-value=2.9e-10 Score=105.10 Aligned_cols=67 Identities=25% Similarity=0.546 Sum_probs=48.2
Q ss_pred CCCccccccccccchhcccc----ccccchhhhhccCCccccccccCCCCCCcchhhhhcCcccccccCCC
Q 027264 120 YPTGEERCIACKLCEAVCPA----QAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPN 186 (226)
Q Consensus 120 ~~~~~~~Ci~Cg~C~~~CP~----~ai~~~~~~~~~~~~~~~~~~~d~~~C~~Cg~Cv~~CP~~Ai~~~~~ 186 (226)
+.++.++|++||.|+++||. ++|.+..+.....-.......++...|++||.|+.+||++||.++..
T Consensus 140 i~~d~~kCi~Cg~Cv~~CP~~~~~~ai~~~~~g~~~~i~~~~~~~i~~~~Ci~Cg~Cv~~CP~gAi~~~~~ 210 (574)
T 3c8y_A 140 LTVDRTKCLLCGRCVNACGKNTETYAMKFLNKNGKTIIGAEDEKCFDDTNCLLCGQCIIACPVAALSEKSH 210 (574)
T ss_dssp EEEEGGGCCCCCHHHHHHHHHHSCCCSEEEEETTEEEEESGGGCCGGGSSCCCCCHHHHHCSSTTEEECCC
T ss_pred ceeCcccCcCCCCccchhCchhcCCceeeccCCccceecccccceechhhCCcchhHHHhhccCCcccccc
Confidence 44678999999999999997 78876543211000000123467789999999999999999987653
No 23
>2vpz_B NRFC protein; oxidoreductase, molybdopterin guanine dinucleotide, iron-sulfur, metal-binding, molybdopterin; HET: MGD; 2.40A {Thermus thermophilus} PDB: 2vpx_B* 2vpw_B* 2vpy_B*
Probab=98.80 E-value=1.2e-09 Score=87.67 Aligned_cols=52 Identities=38% Similarity=0.760 Sum_probs=26.4
Q ss_pred cccccccc--cchhccccccccchhhhhccCCccccccccCCCCCCcchhhhhcCcccccccC
Q 027264 124 EERCIACK--LCEAVCPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEG 184 (226)
Q Consensus 124 ~~~Ci~Cg--~C~~~CP~~ai~~~~~~~~~~~~~~~~~~~d~~~C~~Cg~Cv~~CP~~Ai~~~ 184 (226)
.++|+.|+ .|+++||++||...... .+.++.+.|++||.|+.+||++||.+.
T Consensus 55 ~~~C~~C~~p~C~~~CP~gAi~~~~~g---------~~~id~~~CigC~~C~~~CP~~Ai~~~ 108 (195)
T 2vpz_B 55 PEQCLHCENPPCVPVCPTGASYQTKDG---------LVLVDPKKCIACGACIAACPYDARYLH 108 (195)
T ss_dssp EEECCCCSSCTTTTTCSSSCEEECTTS---------CEEECTTTCCCCCHHHHHCTTCCCEEC
T ss_pred cccCcCccCcHHHHhcCCCceeccccc---------ceeecCCCCCCcChhHhhCCCCCeEEC
Confidence 45566666 46666666655443210 223444555555555555555555443
No 24
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=98.76 E-value=1.5e-09 Score=107.83 Aligned_cols=68 Identities=34% Similarity=0.624 Sum_probs=48.9
Q ss_pred CCccccccccccchhccccccccch---hhh-----hccCC-----c----cccccccCCCCCCcchhhhhcCcc--ccc
Q 027264 121 PTGEERCIACKLCEAVCPAQAITIE---AEE-----REDGS-----R----RTTRYDIDMTKCIYCGFCQEACPV--DAI 181 (226)
Q Consensus 121 ~~~~~~Ci~Cg~C~~~CP~~ai~~~---~~~-----~~~~~-----~----~~~~~~~d~~~C~~Cg~Cv~~CP~--~Ai 181 (226)
.++.++|+.||.|+.+||.++|... ... +.... + ......++...|++||.|+.+||+ +||
T Consensus 682 ~~d~~kCi~Cg~Cv~vCP~~AI~~~~~~~~e~~~ap~g~~~~~~~~k~~~g~~~~~~v~~~~C~gCG~Cv~vCP~~~~AI 761 (1231)
T 2c42_A 682 QWVPENCIQCNQCAFVCPHSAILPVLAKEEELVGAPANFTALEAKGKELKGYKFRIQINTLDCMGCGNCADICPPKEKAL 761 (1231)
T ss_dssp EECTTTCCCCCHHHHHCSSCCEEEEEECGGGGTTCCTTCCCEECCSGGGTTCEEEEEECTTTCCCCCHHHHHCSSSSCSE
T ss_pred EEeCccCCchhhHHHhCCcccccccccchHHHhhCcccccccccccccccccccceeechhhCCChhHHHhhCCCCccCe
Confidence 3678999999999999999998753 110 00000 0 001245778899999999999999 999
Q ss_pred ccCCCcc
Q 027264 182 VEGPNFE 188 (226)
Q Consensus 182 ~~~~~~~ 188 (226)
.+.+...
T Consensus 762 ~~~~~~~ 768 (1231)
T 2c42_A 762 VMQPLDT 768 (1231)
T ss_dssp EEEEGGG
T ss_pred EEecchh
Confidence 8877544
No 25
>2ivf_B Ethylbenzene dehydrogenase beta-subunit; anaerobic hydrocarbon degradation, MOCO, Fe/S cluster, MO- B enzyme, DMSO reductase family; HET: MES MGD MD1 HEM; 1.88A {Aromatoleum aromaticum}
Probab=98.74 E-value=1.7e-09 Score=93.97 Aligned_cols=23 Identities=35% Similarity=0.624 Sum_probs=14.2
Q ss_pred Cccccccccc--cchhccccccccc
Q 027264 122 TGEERCIACK--LCEAVCPAQAITI 144 (226)
Q Consensus 122 ~~~~~Ci~Cg--~C~~~CP~~ai~~ 144 (226)
++.++|++|+ .|+.+||++|+..
T Consensus 146 ~~~~~C~~C~~~~Cv~~CP~gAi~~ 170 (352)
T 2ivf_B 146 YLARMCNHCTNPACLAACPTGAIYK 170 (352)
T ss_dssp EEEECCCCCSSCHHHHHCTTCCEEE
T ss_pred ECCCCCcCcCCccccccCCCCceee
Confidence 3345666666 6666666666654
No 26
>1ti6_B Pyrogallol hydroxytransferase small subunit; molybdenum binding enzyme, MGD-cofactors, DMSO-reductase family, 4Fe-4S-cluster; HET: MGD BTT; 2.00A {Pelobacter acidigallici} SCOP: b.3.5.1 d.58.1.5 PDB: 1ti2_B* 1ti4_B* 1vld_N* 1vle_N* 1vlf_N*
Probab=98.72 E-value=2e-09 Score=90.69 Aligned_cols=54 Identities=20% Similarity=0.229 Sum_probs=43.3
Q ss_pred CCccccccccccchhccccccccchhhhhccCCccccccccCCCCCCcc----------h---hhhhcCcccccccCCC
Q 027264 121 PTGEERCIACKLCEAVCPAQAITIEAEEREDGSRRTTRYDIDMTKCIYC----------G---FCQEACPVDAIVEGPN 186 (226)
Q Consensus 121 ~~~~~~Ci~Cg~C~~~CP~~ai~~~~~~~~~~~~~~~~~~~d~~~C~~C----------g---~Cv~~CP~~Ai~~~~~ 186 (226)
.++.++|++|+.|+.+||.++|.+.... .+...|++| | .|+.+||++||.+.+.
T Consensus 93 ~id~~~CigC~~C~~~CP~~Ai~~~~~~------------~~~~kC~~C~~r~~~~~~~G~~P~Cv~~CP~~Ai~~~~~ 159 (274)
T 1ti6_B 93 LIDPEKAKGKKELLDTCPYGVMYWNEEE------------NVAQKCTMCAHLLDDESWAPKMPRCAHNCGSFVYEFLKT 159 (274)
T ss_dssp EECTTTTTTCGGGGGGCSSCCCEEETTT------------TEEECCCTTHHHHTCTTCTTCSCHHHHHCSSCCEEEEEE
T ss_pred EechhhccchHHHHhhCccCCeEEEccc------------CccccCCCchhhhhhhccCCCCcchhhhCCcCceEEcCC
Confidence 3667899999999999999998875421 234679999 8 9999999999987664
No 27
>2ivf_B Ethylbenzene dehydrogenase beta-subunit; anaerobic hydrocarbon degradation, MOCO, Fe/S cluster, MO- B enzyme, DMSO reductase family; HET: MES MGD MD1 HEM; 1.88A {Aromatoleum aromaticum}
Probab=98.72 E-value=1.9e-09 Score=93.73 Aligned_cols=56 Identities=29% Similarity=0.546 Sum_probs=45.4
Q ss_pred CCccccccccccchhccccccccchhhhhccCCccccccccCCCCCCcch---------hhhhcCcccccccCCCcc
Q 027264 121 PTGEERCIACKLCEAVCPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCG---------FCQEACPVDAIVEGPNFE 188 (226)
Q Consensus 121 ~~~~~~Ci~Cg~C~~~CP~~ai~~~~~~~~~~~~~~~~~~~d~~~C~~Cg---------~Cv~~CP~~Ai~~~~~~~ 188 (226)
.++.++|++|+.|+.+||.+|+.+... ......|++|+ .|+.+||++||.+++..+
T Consensus 178 ~id~~kCigCg~Cv~aCP~~Ai~~~~~------------~~~~~kC~~C~~r~~~g~~paCv~~CP~~Ai~~g~~~d 242 (352)
T 2ivf_B 178 LVDQERCKGHRHCVEACPYKAIYFNPV------------SQTSEKCILCYPRIEKGIANACNRQCPGRVRAFGYLDD 242 (352)
T ss_dssp EECTTTCCCCCHHHHHCTTCCEEEETT------------TTEEEECCTTHHHHTTTBCCHHHHTCTTCCEEEEETTC
T ss_pred EechhhcCCchHHHhhcCccceecccc------------cccccccCCCcchhhcCCCChHHHhcCccceeccccch
Confidence 356789999999999999999987542 22346899997 999999999998866444
No 28
>2vpz_B NRFC protein; oxidoreductase, molybdopterin guanine dinucleotide, iron-sulfur, metal-binding, molybdopterin; HET: MGD; 2.40A {Thermus thermophilus} PDB: 2vpx_B* 2vpw_B* 2vpy_B*
Probab=98.68 E-value=4.1e-09 Score=84.47 Aligned_cols=59 Identities=29% Similarity=0.633 Sum_probs=47.0
Q ss_pred CCccccccccccchhccccccccchhhhhccCCccccccccCCCCCCcch---------hhhhcCcccccccCCCcccch
Q 027264 121 PTGEERCIACKLCEAVCPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCG---------FCQEACPVDAIVEGPNFEYST 191 (226)
Q Consensus 121 ~~~~~~Ci~Cg~C~~~CP~~ai~~~~~~~~~~~~~~~~~~~d~~~C~~Cg---------~Cv~~CP~~Ai~~~~~~~~~~ 191 (226)
.++.++|++||.|+.+||++||.+.... . ...|++|+ .|+.+||++||.+++..+..+
T Consensus 84 ~id~~~CigC~~C~~~CP~~Ai~~~~~~-----------~--~~kC~~C~~~~~~g~~p~Cv~~CP~~Ai~~g~~~~~~~ 150 (195)
T 2vpz_B 84 LVDPKKCIACGACIAACPYDARYLHPAG-----------Y--VSKCTFCAHRLEKGKVPACVETCPTYCRTFGDLEDPES 150 (195)
T ss_dssp EECTTTCCCCCHHHHHCTTCCCEECTTS-----------S--EECCCTTHHHHHTTCCCHHHHSCTTCCEEEEETTCTTS
T ss_pred eecCCCCCCcChhHhhCCCCCeEECCCC-----------C--CccCcCcchHHhCCCCchhHhhCCcccEEEecccCchH
Confidence 3567899999999999999999876431 1 36799999 799999999999876544443
Q ss_pred h
Q 027264 192 E 192 (226)
Q Consensus 192 ~ 192 (226)
+
T Consensus 151 ~ 151 (195)
T 2vpz_B 151 P 151 (195)
T ss_dssp H
T ss_pred H
Confidence 3
No 29
>3i9v_3 NADH-quinone oxidoreductase subunit 3; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_3* 2fug_3* 3iam_3* 3ias_3* 3m9s_3*
Probab=98.63 E-value=5.9e-09 Score=99.60 Aligned_cols=62 Identities=19% Similarity=0.242 Sum_probs=42.7
Q ss_pred CCCccccccccccchhcc----ccccccchhhhhccCCccccccccCCCCCCcchhhhhcCcccccccCC
Q 027264 120 YPTGEERCIACKLCEAVC----PAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGP 185 (226)
Q Consensus 120 ~~~~~~~Ci~Cg~C~~~C----P~~ai~~~~~~~~~~~~~~~~~~~d~~~C~~Cg~Cv~~CP~~Ai~~~~ 185 (226)
+.++.++||.||.|+++| |.++|.+..+.. .... ....+...|++||.|+.+||++||..++
T Consensus 174 i~~d~~~CI~C~~Cv~~C~~~~~~~~i~~~~~g~--~~~i--~~~~~~~~C~~CG~Cv~vCP~gAl~~~~ 239 (783)
T 3i9v_3 174 VILDRERCIHCKRCVRYFEEVPGDEVLDFIERGV--HTFI--GTMDFGLPSGFSGNITDICPVGALLDLT 239 (783)
T ss_dssp EEECTTTCCCCCHHHHHHHHTTCCCCCEECSCTT--SCCE--ECSSTTCCSTTTTTHHHHCSSSSEEEGG
T ss_pred EEEchhhCCCccHHHHHhhhhcCCceeeeecCCC--ccEE--ccCCCCCCCccchhHHhhcccCceeccc
Confidence 446789999999999999 556665543221 1110 0011234799999999999999998654
No 30
>1q16_B Respiratory nitrate reductase 1 beta chain; membrane protein, electron-transfer, oxidoreductase; HET: FME MD1 HEM AGA 3PH; 1.90A {Escherichia coli} SCOP: d.58.1.5 PDB: 1r27_B* 1siw_B* 1y5i_B* 1y5l_B* 1y5n_B* 3ir5_B* 3ir6_B* 3ir7_B* 1y4z_B* 3egw_B*
Probab=98.61 E-value=7.2e-09 Score=93.82 Aligned_cols=56 Identities=30% Similarity=0.462 Sum_probs=40.0
Q ss_pred Cccccccccc--cchhccccccccchhhhhccCCccccccccCCCCCCcchhhhhcCcccccccCC
Q 027264 122 TGEERCIACK--LCEAVCPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGP 185 (226)
Q Consensus 122 ~~~~~Ci~Cg--~C~~~CP~~ai~~~~~~~~~~~~~~~~~~~d~~~C~~Cg~Cv~~CP~~Ai~~~~ 185 (226)
++.++|++|+ .|+.+||++||....... ...++.+.|++||.|+.+||++||.+.+
T Consensus 179 ~~~~~C~~C~~~~Cv~aCP~gAI~~~~~~g--------~v~id~~kCigCg~Cv~~CP~~AI~~~~ 236 (512)
T 1q16_B 179 YLPRLCEHCLNPACVATCPSGAIYKREEDG--------IVLIDQDKCRGWRMCITGCPYKKIYFNW 236 (512)
T ss_dssp EEEECCCCCSSCHHHHTCTTCCEEEETTTC--------CEEECTTTCCCCCCHHHHCTTCCEEEET
T ss_pred ecCccCcCCCCchhhhhCCcCcEEeecCCC--------eEEECHHHCCCchHHHhhCCccceeccc
Confidence 4567899998 699999988887632110 2456677788888888888888876543
No 31
>1h0h_B Formate dehydrogenase (small subunit); tungsten selenium formate dehydrogenase, selenocysteine, molybdopterin, MGD, iron-sulphur cluster; HET: 2MD MGD EPE; 1.8A {Desulfovibrio gigas} SCOP: d.58.1.5
Probab=98.61 E-value=3.3e-09 Score=86.20 Aligned_cols=56 Identities=27% Similarity=0.386 Sum_probs=43.1
Q ss_pred CCcccccc--ccccchhccccccccchhhhhccCCccccccccCCCCCCcc------h---hhhhcCcccccccCCCcc
Q 027264 121 PTGEERCI--ACKLCEAVCPAQAITIEAEEREDGSRRTTRYDIDMTKCIYC------G---FCQEACPVDAIVEGPNFE 188 (226)
Q Consensus 121 ~~~~~~Ci--~Cg~C~~~CP~~ai~~~~~~~~~~~~~~~~~~~d~~~C~~C------g---~Cv~~CP~~Ai~~~~~~~ 188 (226)
.++.++|+ +|+.|+.+||++||.+.... .+...|++| | .|+.+||++||.+.+..+
T Consensus 102 ~id~~~C~~~~C~~C~~~CP~~Ai~~~~~~------------~~~~kC~~C~~~~~~G~~p~Cv~~CP~~Ai~~~~~~~ 168 (214)
T 1h0h_B 102 LFTPKTKDLEDYESVISACPYDVPRKVAES------------NQMAKCDMCIDRITNGLRPACVTSCPTGAMNFGDLSE 168 (214)
T ss_dssp EECGGGGGCSCHHHHHHHCTTCCCEECTTS------------SCEECCCTTHHHHTTTCCCHHHHHCSSSCEEEEEHHH
T ss_pred EEeHHHCccccccHHHHhcCCCCeEecCCC------------cccCcCCCCcchhhcCCChhHHHhcCcccEEEccHHH
Confidence 35678899 99999999999988765421 134679999 5 999999999998765433
No 32
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=98.58 E-value=5.6e-09 Score=102.46 Aligned_cols=59 Identities=31% Similarity=0.622 Sum_probs=46.1
Q ss_pred CCCccccccccccchhcccc---ccccchhhhhccCCccccccccCCCCCCcchhhhhcCcc-cccccCCCc
Q 027264 120 YPTGEERCIACKLCEAVCPA---QAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPV-DAIVEGPNF 187 (226)
Q Consensus 120 ~~~~~~~Ci~Cg~C~~~CP~---~ai~~~~~~~~~~~~~~~~~~~d~~~C~~Cg~Cv~~CP~-~Ai~~~~~~ 187 (226)
+.++.++|++||.|+.+||+ ++|.+..... ...++ +.|++||.|+.+||+ +||.+....
T Consensus 946 ~~id~~~C~~Cg~C~~~CP~~~~~ai~~~~~~~--------~~~~~-~~C~~Cg~C~~~CP~~~Ai~~~~~~ 1008 (1025)
T 1gte_A 946 AVIDEEMCINCGKCYMTCNDSGYQAIQFDPETH--------LPTVT-DTCTGCTLCLSVCPIIDCIRMVSRT 1008 (1025)
T ss_dssp EEECTTTCCCCCHHHHHHHHHSCSCEEECTTTC--------CEEEC-TTCCCCCHHHHHCSSTTTEEEEECC
T ss_pred EEEEcccCcccCHHHHhcCccccCCEEEeCCCc--------eEEeC-ccCCChhHHHhhCCCCCCEEEecCc
Confidence 34677899999999999997 8887654311 13445 789999999999999 999876543
No 33
>1kqf_B FDH-N beta S, formate dehydrogenase, nitrate-inducible, iron-SU subunit; oxidoreductase, selenium, selenocysteine, seCys, molybdenum; HET: MGD HEM CDL; 1.60A {Escherichia coli} SCOP: d.58.1.5 f.23.22.1 PDB: 1kqg_B*
Probab=98.58 E-value=4.9e-09 Score=89.17 Aligned_cols=52 Identities=35% Similarity=0.728 Sum_probs=27.8
Q ss_pred CccccccccccchhccccccccchhhhhccCCccccccccCCCCCCcch---------hhhhcCcccccccCC
Q 027264 122 TGEERCIACKLCEAVCPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCG---------FCQEACPVDAIVEGP 185 (226)
Q Consensus 122 ~~~~~Ci~Cg~C~~~CP~~ai~~~~~~~~~~~~~~~~~~~d~~~C~~Cg---------~Cv~~CP~~Ai~~~~ 185 (226)
++.++|++||.|+.+||.+++.+.... .....|+.|+ .|+.+||++||.+.+
T Consensus 128 id~~~CigCg~C~~~CP~~ai~~~~~~------------~~~~kC~~C~~r~~~g~~p~Cv~~CP~~Ai~~~~ 188 (294)
T 1kqf_B 128 FQSENCIGCGYCIAGCPFNIPRLNKED------------NRVYKCTLCVDRVSVGQEPACVKTCPTGAIHFGT 188 (294)
T ss_dssp ECGGGCCCCCHHHHHCTTCCCEEETTT------------TEEECCCTTHHHHTTTCCCHHHHHCTTSCEEEEE
T ss_pred eCcccCCCcchhhhcCCCCCcEecCCC------------CCeeeCCCccchhhcCccHHHHHhCCcCcEEEec
Confidence 344556666666666666555543211 1113466665 666666666665543
No 34
>3mm5_B Sulfite reductase, dissimilatory-type subunit BET; alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A {Archaeoglobus fulgidus} PDB: 3c7b_B* 3mm6_B* 3mm7_B* 3mm8_B* 3mm9_B* 3mma_B* 3mmb_B* 3mmc_B*
Probab=98.57 E-value=8.6e-09 Score=90.25 Aligned_cols=57 Identities=26% Similarity=0.628 Sum_probs=45.2
Q ss_pred CCCccccc-ccc--ccchhccccccccchhhhhccCCccccccccCCCCCCcchhhhhcCcccccccC
Q 027264 120 YPTGEERC-IAC--KLCEAVCPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEG 184 (226)
Q Consensus 120 ~~~~~~~C-i~C--g~C~~~CP~~ai~~~~~~~~~~~~~~~~~~~d~~~C~~Cg~Cv~~CP~~Ai~~~ 184 (226)
+.++.++| ..| +.|+.+||++||..+... ..+.++.+.|++||.|+.+||.+||...
T Consensus 200 p~id~~~c~~~Ce~~~Cv~~CP~~AI~~~~~~--------~~~~id~~~C~~Cg~C~~~CP~~Ai~~~ 259 (366)
T 3mm5_B 200 PIPNDEAIRKTCEIPSTVAACPTGALKPDMKN--------KTIKVDVEKCMYCGNCYTMCPGMPLFDP 259 (366)
T ss_dssp CCCCHHHHHHHCCHHHHHHTCTTCCEEEETTT--------TEEEECGGGCCCCCHHHHHCTTCCCCCT
T ss_pred eEEcchhccccccccchhccCCccceEecCCC--------CeEEEehhhCCCcchHHHhCCHhhcccc
Confidence 44666777 466 999999999999876421 1467888999999999999999998643
No 35
>1kqf_B FDH-N beta S, formate dehydrogenase, nitrate-inducible, iron-SU subunit; oxidoreductase, selenium, selenocysteine, seCys, molybdenum; HET: MGD HEM CDL; 1.60A {Escherichia coli} SCOP: d.58.1.5 f.23.22.1 PDB: 1kqg_B*
Probab=98.57 E-value=9.1e-09 Score=87.53 Aligned_cols=55 Identities=29% Similarity=0.693 Sum_probs=44.9
Q ss_pred Cccccccccc--cchhcccc-ccccchhhhhccCCccccccccCCCCCCcchhhhhcCcccccccCC
Q 027264 122 TGEERCIACK--LCEAVCPA-QAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGP 185 (226)
Q Consensus 122 ~~~~~Ci~Cg--~C~~~CP~-~ai~~~~~~~~~~~~~~~~~~~d~~~C~~Cg~Cv~~CP~~Ai~~~~ 185 (226)
++.+.|+.|+ .|+.+||+ +||...... .+.++.+.|++||.|+.+||++||.+..
T Consensus 95 ~~~~~C~~C~~~~C~~~CP~~gAi~~~~~g---------~v~id~~~CigCg~C~~~CP~~ai~~~~ 152 (294)
T 1kqf_B 95 IRKDGCMHCEDPGCLKACPSAGAIIQYANG---------IVDFQSENCIGCGYCIAGCPFNIPRLNK 152 (294)
T ss_dssp EEEESCCCBSSCHHHHHCCSTTSEEEETTS---------CEEECGGGCCCCCHHHHHCTTCCCEEET
T ss_pred ECcccCCCcCChhhhhhCCccCcccccccc---------ceEeCcccCCCcchhhhcCCCCCcEecC
Confidence 3467899999 89999999 999754221 3567778999999999999999998654
No 36
>1ti6_B Pyrogallol hydroxytransferase small subunit; molybdenum binding enzyme, MGD-cofactors, DMSO-reductase family, 4Fe-4S-cluster; HET: MGD BTT; 2.00A {Pelobacter acidigallici} SCOP: b.3.5.1 d.58.1.5 PDB: 1ti2_B* 1ti4_B* 1vld_N* 1vle_N* 1vlf_N*
Probab=98.55 E-value=1.9e-08 Score=84.75 Aligned_cols=54 Identities=19% Similarity=0.214 Sum_probs=44.3
Q ss_pred Ccccccccccc--chhccccccccchhhhhccCCccccccccCCCCCCcchhhhhcCcccccccCC
Q 027264 122 TGEERCIACKL--CEAVCPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGP 185 (226)
Q Consensus 122 ~~~~~Ci~Cg~--C~~~CP~~ai~~~~~~~~~~~~~~~~~~~d~~~C~~Cg~Cv~~CP~~Ai~~~~ 185 (226)
.....|+.|+. |+++||+ |+...... ...++.+.|++|+.|+.+||++||.+.+
T Consensus 63 ~~~~~C~~C~~p~C~~~CP~-Ai~~~~~g---------~v~id~~~CigC~~C~~~CP~~Ai~~~~ 118 (274)
T 1ti6_B 63 YRPTPCMHCENAPCVAKGNG-AVYQREDG---------IVLIDPEKAKGKKELLDTCPYGVMYWNE 118 (274)
T ss_dssp EEEECCCCCTTCHHHHHTTT-SEEECTTS---------CEEECTTTTTTCGGGGGGCSSCCCEEET
T ss_pred EcCCcCCCCCChHHHhhChH-HhhhccCC---------cEEechhhccchHHHHhhCccCCeEEEc
Confidence 34578999998 9999999 98764211 3567889999999999999999998654
No 37
>1q16_B Respiratory nitrate reductase 1 beta chain; membrane protein, electron-transfer, oxidoreductase; HET: FME MD1 HEM AGA 3PH; 1.90A {Escherichia coli} SCOP: d.58.1.5 PDB: 1r27_B* 1siw_B* 1y5i_B* 1y5l_B* 1y5n_B* 3ir5_B* 3ir6_B* 3ir7_B* 1y4z_B* 3egw_B*
Probab=98.51 E-value=1.3e-08 Score=92.06 Aligned_cols=52 Identities=25% Similarity=0.588 Sum_probs=43.4
Q ss_pred CCccccccccccchhccccccccchhhhhccCCccccccccCCCCCCcch---------hhhhcCcccccccC
Q 027264 121 PTGEERCIACKLCEAVCPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCG---------FCQEACPVDAIVEG 184 (226)
Q Consensus 121 ~~~~~~Ci~Cg~C~~~CP~~ai~~~~~~~~~~~~~~~~~~~d~~~C~~Cg---------~Cv~~CP~~Ai~~~ 184 (226)
.++.++|++||.|+.+||.+||.+.... .....|++|+ .|+.+||++||.++
T Consensus 211 ~id~~kCigCg~Cv~~CP~~AI~~~~~~------------~~~~kC~~Cg~ri~~G~~P~Cv~~CP~~Ai~~g 271 (512)
T 1q16_B 211 LIDQDKCRGWRMCITGCPYKKIYFNWKS------------GKSEKCIFCYPRIEAGQPTVCSETCVGRIRYLG 271 (512)
T ss_dssp EECTTTCCCCCCHHHHCTTCCEEEETTT------------TEEEECCTTHHHHTTTCCCHHHHTCTTCCEEEE
T ss_pred EECHHHCCCchHHHhhCCccceecccCC------------CCcccCcCCCchhhcCCCCceEeeCchhhhhcc
Confidence 3667899999999999999999875431 1246799999 99999999999876
No 38
>3or1_B Sulfite reductase beta; dissimilatory sulfite reductase, sulfate reduction, oxidored sulfite reduction; HET: SRM; 1.76A {Desulfovibrio gigas} PDB: 3or2_B* 2v4j_B* 2xsj_B*
Probab=98.46 E-value=3.5e-08 Score=86.96 Aligned_cols=63 Identities=27% Similarity=0.593 Sum_probs=45.0
Q ss_pred CCCcccccc---ccccchhccccccccchhhhhccCCccccccccCCCCCCcchhhhhcCcccccccC
Q 027264 120 YPTGEERCI---ACKLCEAVCPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEG 184 (226)
Q Consensus 120 ~~~~~~~Ci---~Cg~C~~~CP~~ai~~~~~~~~~~~~~~~~~~~d~~~C~~Cg~Cv~~CP~~Ai~~~ 184 (226)
+.++.++|. +|+.|+.+||++||....... .+ .....+.+|.+.|++||.|+.+||.+||..+
T Consensus 211 p~id~e~~~~~Ce~~~cv~~CPt~AI~~~~~~~-~g-~~~~~v~id~~~Ci~Cg~C~~~CP~~Ai~~~ 276 (386)
T 3or1_B 211 PMIDHENLAELCEIPLAVAACPTAAVKPITAEV-NG-QKVKSVAINNDRCMYCGNCYTMCPALPLSDG 276 (386)
T ss_dssp CCCCTTTHHHHCCHHHHHHHCTTCCEEEEEEEE-TT-EEEEEEEECTTTCCCCCHHHHHCTTCCCCCT
T ss_pred ceechhhhcccccchhhhhhCchhhcccccccc-CC-ccccccccCCCcCCccccHHHhCcHhhCcCC
Confidence 345666665 459999999999998753100 00 0012467889999999999999999998653
No 39
>2wdq_B Succinate dehydrogenase iron-sulfur subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_B* 2acz_B* 1nek_B* 2wdr_B* 2wdv_B* 2ws3_B* 2wu2_B* 2wu5_B* 2wp9_B*
Probab=98.42 E-value=2.3e-08 Score=82.31 Aligned_cols=63 Identities=25% Similarity=0.416 Sum_probs=40.0
Q ss_pred CCCccccccccccchhccccccccc----hhhh-----hc-cCCccc---ccc-----ccCCCCCCcchhhhhcCccccc
Q 027264 120 YPTGEERCIACKLCEAVCPAQAITI----EAEE-----RE-DGSRRT---TRY-----DIDMTKCIYCGFCQEACPVDAI 181 (226)
Q Consensus 120 ~~~~~~~Ci~Cg~C~~~CP~~ai~~----~~~~-----~~-~~~~~~---~~~-----~~d~~~C~~Cg~Cv~~CP~~Ai 181 (226)
...+.++|+.||.|+.+||+..+.. .+.. +. ...+.. ..+ ..+.+.|+.||.|+.+||+++.
T Consensus 142 ~~~~~~~Ci~Cg~C~~~CP~~~~~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~vCP~gi~ 221 (238)
T 2wdq_B 142 KLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLIDSRDTETDSRLDGLSDAFSVFRCHSIMNCVSVCPKGLN 221 (238)
T ss_dssp TTTTTTTCCCCCTTGGGCHHHHHCTTTSCCHHHHHHHHHHHTCTTCCCHHHHHHTTCSTTTTTTCCCCCHHHHHCTTCCC
T ss_pred HHhccccccccCCchhhCcCCccCCCCCCCHHHHHHHHHHHhCCcccchHHHHHHHhccCCCCcCcccchhhhhcCCCCC
Confidence 3456789999999999999876421 1100 00 000000 011 1356789999999999999965
Q ss_pred c
Q 027264 182 V 182 (226)
Q Consensus 182 ~ 182 (226)
.
T Consensus 222 ~ 222 (238)
T 2wdq_B 222 P 222 (238)
T ss_dssp H
T ss_pred H
Confidence 4
No 40
>3vr8_B Iron-sulfur subunit of succinate dehydrogenase; membrane protein, reductase, mitochondria MEMB oxidoreductase; HET: FAD HEM RQX EPH; 2.81A {Ascaris suum} PDB: 3vrb_B*
Probab=98.38 E-value=5.5e-09 Score=88.13 Aligned_cols=108 Identities=19% Similarity=0.294 Sum_probs=57.5
Q ss_pred HHHhhhHHHHHHHHHHHHHhcCCcceecCccc-cCCC--CC-CccCccccccCCCccccccccccchhcccccccc----
Q 027264 72 INMLFLTEMVRGLGLTLKYFFDKKVTINYPFE-KGPL--SP-RFRGEHALRRYPTGEERCIACKLCEAVCPAQAIT---- 143 (226)
Q Consensus 72 i~~~~~~~~~~~l~~~~~~~f~~~~~~~~p~~-~~~~--~~-~~~~~~~~~~~~~~~~~Ci~Cg~C~~~CP~~ai~---- 143 (226)
+.++..+.++++|.+++..||+....+.-... .... .. .................||.||.|..+||+....
T Consensus 123 IepL~~~pVikDLvvD~~~f~~~~~~v~p~l~~~~~~~~~~~~~~qs~~~~~~~~~~~~CI~CG~C~~aCP~~~~~~~~~ 202 (282)
T 3vr8_B 123 IYPLPHMFVIKDLVPDMNLFYAQYASIQPWLQKKTKINLGEKQQYQSIKEQEKLDGLYECILCACCSASCPSYWWNADKY 202 (282)
T ss_pred eccCCCCceeeccccccHHHHHHHHHHhhhcCCCCCCCCCchhcccCHHHHHHHHhhhhCcccCcCcccCCceeccCCcC
Confidence 34555667899999999998875433221110 1100 00 1111111111112346799999999999986542
Q ss_pred chhhhhcc-------CC----cc-cccc--ccCCCCCCcchhhhhcCccc
Q 027264 144 IEAEERED-------GS----RR-TTRY--DIDMTKCIYCGFCQEACPVD 179 (226)
Q Consensus 144 ~~~~~~~~-------~~----~~-~~~~--~~d~~~C~~Cg~Cv~~CP~~ 179 (226)
+.+..... .. .. ...+ ....+.|+.||.|..+||.+
T Consensus 203 lGP~~li~a~r~~~d~rd~~~~erl~~l~~~~~l~~C~~Cg~C~~vCP~g 252 (282)
T 3vr8_B 203 LGPAVLMQAYRWIIDSRDDSAAERLARMQDGFSAFKCHTIMNCTKTCPKH 252 (282)
T ss_pred CCHHHHHHHHHHHhCCcccchHHHHHHHhhcCCcccChhhCCccccCcCC
Confidence 11111000 00 00 0011 12467899999999999998
No 41
>1h0h_B Formate dehydrogenase (small subunit); tungsten selenium formate dehydrogenase, selenocysteine, molybdopterin, MGD, iron-sulphur cluster; HET: 2MD MGD EPE; 1.8A {Desulfovibrio gigas} SCOP: d.58.1.5
Probab=98.37 E-value=5.1e-08 Score=79.19 Aligned_cols=56 Identities=18% Similarity=0.167 Sum_probs=45.2
Q ss_pred Ccccccccccc--chhccc---cccccchhhhhccCCccccccccCCCCCC--cchhhhhcCcccccccCC
Q 027264 122 TGEERCIACKL--CEAVCP---AQAITIEAEEREDGSRRTTRYDIDMTKCI--YCGFCQEACPVDAIVEGP 185 (226)
Q Consensus 122 ~~~~~Ci~Cg~--C~~~CP---~~ai~~~~~~~~~~~~~~~~~~~d~~~C~--~Cg~Cv~~CP~~Ai~~~~ 185 (226)
....+|+.|+. |+++|| ++||...... ..+.++.+.|+ +|+.|+.+||++||.+..
T Consensus 67 ~~~~~C~~C~~p~C~~~CP~~~~gAi~~~~~~--------g~v~id~~~C~~~~C~~C~~~CP~~Ai~~~~ 129 (214)
T 1h0h_B 67 FFPDQCRHCIAPPCKATADMEDESAIIHDDAT--------GCVLFTPKTKDLEDYESVISACPYDVPRKVA 129 (214)
T ss_dssp EEEECCCCCSSCHHHHHHTTTCTTSEEECTTT--------CCEEECGGGGGCSCHHHHHHHCTTCCCEECT
T ss_pred ecCCcCcCcCCchhhccCCccccccEEecCCC--------CeEEEeHHHCccccccHHHHhcCCCCeEecC
Confidence 34678999996 999999 9998764311 13567778999 999999999999998754
No 42
>1kf6_B Fumarate reductase iron-sulfur protein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.1.2.1 d.15.4.2 PDB: 1kfy_B* 1l0v_B* 2b76_B* 3cir_B* 3p4p_B* 3p4q_B* 3p4r_B* 3p4s_B*
Probab=98.28 E-value=8.8e-08 Score=79.04 Aligned_cols=60 Identities=28% Similarity=0.721 Sum_probs=38.1
Q ss_pred CCccccccccccchhccccccccc---hhh-----------hhccCCc-ccccc--ccCCCCCCcchhhhhcCcccc
Q 027264 121 PTGEERCIACKLCEAVCPAQAITI---EAE-----------EREDGSR-RTTRY--DIDMTKCIYCGFCQEACPVDA 180 (226)
Q Consensus 121 ~~~~~~Ci~Cg~C~~~CP~~ai~~---~~~-----------~~~~~~~-~~~~~--~~d~~~C~~Cg~Cv~~CP~~A 180 (226)
..+.++|+.||.|+.+||..++.. .+. .+..+.. ....+ ..+.+.|++||.|+.+||++.
T Consensus 142 ~~~~~~Ci~Cg~C~~~CP~~~~~~~~~gP~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~vCP~gi 218 (243)
T 1kf6_B 142 YHQFSGCINCGLCYAACPQFGLNPEFIGPAAITLAHRYNEDSRDHGKKERMAQLNSQNGVWSCTFVGYCSEVCPKHV 218 (243)
T ss_dssp TGGGGCCCCCCHHHHHCHHHHHCTTSCCHHHHHHHHHHHTCTTCCCTHHHHHHHHSTTTGGGCCCCCHHHHHCTTCC
T ss_pred hhhhhhccccCccccccCCCcccCCCCCHHHHHHHHHHhhCccccchHHHHHHHhccCCcccCcccCCcchhCCCCC
Confidence 366789999999999999876531 110 0000000 00011 134578999999999999983
No 43
>3mm5_A Sulfite reductase, dissimilatory-type subunit ALP; alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A {Archaeoglobus fulgidus} PDB: 3mm6_A* 3mm7_A* 3mm8_A* 3mm9_A* 3mma_A* 3mmb_A* 3mmc_A* 3c7b_A*
Probab=98.26 E-value=1.4e-07 Score=83.77 Aligned_cols=43 Identities=23% Similarity=0.471 Sum_probs=36.9
Q ss_pred cccchhccccccccchhhhhccCCccccccccCCCCCCcchhhhhcCcccccc
Q 027264 130 CKLCEAVCPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIV 182 (226)
Q Consensus 130 Cg~C~~~CP~~ai~~~~~~~~~~~~~~~~~~~d~~~C~~Cg~Cv~~CP~~Ai~ 182 (226)
|+.|+.+||++||..+.. .+.+|.+.|++||.|+.+||++++.
T Consensus 260 ~~~cv~~CPt~Ai~~~~~----------~~~id~~~Ci~Cg~Ci~~CP~~~~~ 302 (418)
T 3mm5_A 260 ENEVVKLCPTGAIKWDGK----------ELTIDNRECVRCMHCINKMPKALKP 302 (418)
T ss_dssp HHHTGGGCTTCCEEECSS----------CEEECTTTCCCCCHHHHHCTTTEEC
T ss_pred CccccccCCccccccCCc----------eeEEChhhcCccChhHHhCcHhhcc
Confidence 488999999999988532 4678899999999999999998765
No 44
>2h88_B Succinate dehydrogenase IP subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_B* 1yq3_B* 2fbw_B* 2h89_B* 2wqy_B* 3aef_B* 3abv_B* 3ae1_B* 3ae3_B* 3ae2_B* 3ae5_B* 3ae6_B* 3ae7_B* 3ae8_B* 3ae9_B* 3aea_B* 3aeb_B* 3aec_B* 3aed_B* 3aee_B* ...
Probab=98.26 E-value=1.5e-07 Score=78.15 Aligned_cols=60 Identities=20% Similarity=0.464 Sum_probs=37.7
Q ss_pred CCccccccccccchhcccccccc----chhhhh-------ccCCc----cc-ccc--ccCCCCCCcchhhhhcCcccc
Q 027264 121 PTGEERCIACKLCEAVCPAQAIT----IEAEER-------EDGSR----RT-TRY--DIDMTKCIYCGFCQEACPVDA 180 (226)
Q Consensus 121 ~~~~~~Ci~Cg~C~~~CP~~ai~----~~~~~~-------~~~~~----~~-~~~--~~d~~~C~~Cg~Cv~~CP~~A 180 (226)
..+.++|++||.|+.+||+.++. +.+... ..+.. .. ..+ ....+.|+.||.|+.+||++.
T Consensus 152 ~~~~~~Ci~CG~C~~~CP~~~~~~~~~lgP~~~~~~~r~~~~~r~~~~~~r~~~~~~~~~~~~C~~Cg~C~~~CP~~i 229 (252)
T 2h88_B 152 LDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDYTEERLAQLQDPFSLYRCHTIMNCTRTCPKGL 229 (252)
T ss_dssp TTTTTTCCCCCTTGGGCHHHHHHTTTCCHHHHHHHHHHHHTCTTCCCHHHHHHTTCSTTTTTTCCCCCHHHHHCTTCC
T ss_pred hHhHHhchhhCcchhhCCCCccCCCCcCCHHHHHHHHHHhhCCcccchHHHHHHHhcccCCCcCccccchhhhcCCCC
Confidence 34578999999999999987542 111100 00100 00 011 124578999999999999993
No 45
>2bs2_B Quinol-fumarate reductase iron-sulfur subunit B; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.1.2.1 d.15.4.2 PDB: 2bs3_B* 1e7p_B* 1qlb_B* 2bs4_B*
Probab=98.12 E-value=1.8e-07 Score=77.03 Aligned_cols=58 Identities=24% Similarity=0.527 Sum_probs=37.0
Q ss_pred ccccccccccchhcccccccc---chhhh------------hccCCcc-cccc--ccCCCCCCcchhhhhcCcccc
Q 027264 123 GEERCIACKLCEAVCPAQAIT---IEAEE------------REDGSRR-TTRY--DIDMTKCIYCGFCQEACPVDA 180 (226)
Q Consensus 123 ~~~~Ci~Cg~C~~~CP~~ai~---~~~~~------------~~~~~~~-~~~~--~~d~~~C~~Cg~Cv~~CP~~A 180 (226)
+.++|+.||.|+.+||+.++. +.+.. +...... ...+ ....+.|+.||.|+.+||++.
T Consensus 147 ~~~~Ci~Cg~C~~~CP~~~~~~~~~~p~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~C~~Cg~C~~vCP~~i 222 (241)
T 2bs2_B 147 ELDRCIECGCCIAACGTKIMREDFVGAAGLNRVVRFMIDPHDERTDEDYYELIGDDDGVFGCMTLLACHDVCPKNL 222 (241)
T ss_dssp HHHTCCCCCHHHHTCHHHHHCTTCCHHHHHHHHHHHHTCTTCCCCHHHHHHHHCSTTTGGGCCCCCHHHHHCTTCC
T ss_pred hhhhhhccCcCcccCCCCccCCCCCCHHHHHHHHHHhhCccccccHHHHHHHHhcccCcccCcccChhhHhcCCCC
Confidence 467899999999999998653 11110 0000000 0001 234578999999999999993
No 46
>2pa8_D DNA-directed RNA polymerase subunit D; ferredoxin-like Fe-S binding motif, platform for RNA polymer assembly, transferase; 1.76A {Sulfolobus solfataricus} PDB: 2pmz_D 3hkz_D 2waq_D 2wb1_D 2y0s_D
Probab=97.98 E-value=7.5e-07 Score=74.56 Aligned_cols=60 Identities=18% Similarity=0.391 Sum_probs=45.2
Q ss_pred cccccchhccccccccchhhhhccCCccccccccCCCCCCcchhhhhcCcccccccC---CCcccchhcHHHh
Q 027264 128 IACKLCEAVCPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEG---PNFEYSTETHEEL 197 (226)
Q Consensus 128 i~Cg~C~~~CP~~ai~~~~~~~~~~~~~~~~~~~d~~~C~~Cg~Cv~~CP~~Ai~~~---~~~~~~~~~~~~~ 197 (226)
.+||.|++.||.++|.++... ....+...|++||.|+.+|| +|+... +.|.+..++.+.+
T Consensus 174 ~~C~~C~~~CP~g~I~id~~~---------~v~~d~~~C~~C~~C~~vCp-~aI~~~~~~d~~i~~VEt~Gsl 236 (265)
T 2pa8_D 174 ANCEKAVNVCPEGVFELKDGK---------LSVKNELSCTLCEECLRYCN-GSIRISFVEDKYILEIESVGSL 236 (265)
T ss_dssp SCCTTHHHHCTTCCEEEETTE---------EEESCGGGCCCCCHHHHHHT-TSEEEEEEEEEEEEEEEECSSS
T ss_pred hhHHHHHHhCcccCeEecCCe---------eEEeccccCCCchHHHHhCC-CceEEEecCCeEEEEeccCCCC
Confidence 889999999999999876421 12346678999999999999 998644 3455665665554
No 47
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=97.96 E-value=1.1e-06 Score=81.22 Aligned_cols=57 Identities=21% Similarity=0.318 Sum_probs=44.2
Q ss_pred ccccc------cccccchhccccccccc-hhhhhccCCccccccccCCCCCCcchhhhhcCcccccccC
Q 027264 123 GEERC------IACKLCEAVCPAQAITI-EAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEG 184 (226)
Q Consensus 123 ~~~~C------i~Cg~C~~~CP~~ai~~-~~~~~~~~~~~~~~~~~d~~~C~~Cg~Cv~~CP~~Ai~~~ 184 (226)
+.+.| ..||.|+.+||.+++.. +..... ...+.++.+.|+.||.|..+||+++|.+.
T Consensus 508 d~~~~~~~~~~~~~~~c~~~CPa~~~~~~~~~~~~-----~~~~~i~~~~Ci~C~~C~~~cp~~~i~~~ 571 (584)
T 2gmh_A 508 DDSVPVNRNLSIYDGPEQRFCPAGVYEFVPLEQGD-----GFRLQINAQNCVHCKTCDIKDPSQNINWV 571 (584)
T ss_dssp STTHHHHTHHHHHCCTHHHHCTTCCEEEEECSSTT-----CEEEEECGGGCCCCCHHHHHCTTCCEEEC
T ss_pred CcccchhhchhhhcchhhhcCChhhEEEeecCCCC-----ceEEEEeCCCCcCCCCchhhCCCCCceeE
Confidence 45678 78999999999999976 311110 01367888999999999999999999754
No 48
>3or1_A Sulfite reductase alpha; dissimilatory sulfite reductase, sulfate reduction, oxidored sulfite reduction; HET: SRM; 1.76A {Desulfovibrio gigas} PDB: 3or2_A* 2v4j_A* 2xsj_A*
Probab=97.90 E-value=1.4e-06 Score=77.54 Aligned_cols=42 Identities=24% Similarity=0.513 Sum_probs=35.5
Q ss_pred ccchhccccccccchhhhhccCCccccccccCCCCCCcchhhhhcCcccccc
Q 027264 131 KLCEAVCPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIV 182 (226)
Q Consensus 131 g~C~~~CP~~ai~~~~~~~~~~~~~~~~~~~d~~~C~~Cg~Cv~~CP~~Ai~ 182 (226)
+.|+..||++||..+.. .+.+|...|+.||.|+.+||+.++.
T Consensus 278 ~~vv~~CPt~ai~~~~~----------~l~Id~~~C~~Cg~Ci~~CP~al~~ 319 (437)
T 3or1_A 278 AEVVGLCPTGCMTYESG----------TLSIDNKNCTRCMHCINTMPRALKI 319 (437)
T ss_dssp HHTTTTCTTCCEEEETT----------EEEECGGGCCCCSHHHHHCTTTEEC
T ss_pred hhhhccCcHHheeecCC----------EEEEccccCCchhhhHhhCcHhhcc
Confidence 57999999999998632 4678889999999999999986653
No 49
>3cf4_A Acetyl-COA decarboxylase/synthase alpha subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=97.86 E-value=8.2e-07 Score=84.79 Aligned_cols=58 Identities=22% Similarity=0.505 Sum_probs=38.2
Q ss_pred ccccccccccchhccccccccchhh-hhccCCccccccccCCCCCCcchhhhhcCcccccc
Q 027264 123 GEERCIACKLCEAVCPAQAITIEAE-EREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIV 182 (226)
Q Consensus 123 ~~~~Ci~Cg~C~~~CP~~ai~~~~~-~~~~~~~~~~~~~~d~~~C~~Cg~Cv~~CP~~Ai~ 182 (226)
+.++|++||.|+.+||+.+...... ....+.. ..+..+.+.|+.||.|+.+||++++.
T Consensus 413 ~~~~Ci~CG~C~~~CP~~~~~~~il~~~~~G~~--~~~~~~~~~Ci~Cg~C~~vCP~ga~~ 471 (807)
T 3cf4_A 413 MVAKCADCGACLLACPEEIDIPEAMGFAKKGDF--SYFEEIHDTCIGCRRCEQVCKKEIPI 471 (807)
T ss_dssp HHHHCCCCCHHHHHCTTCCCHHHHHHHHHTTCT--HHHHHHHHHCCCCCHHHHHCTTCCCH
T ss_pred hHHhCCCCCchhhhCCCCCchHHHHHHHHcCCh--hhhhhchhhccchhhHHHhCCCCCCh
Confidence 4678999999999999975321100 0000100 01223346799999999999999875
No 50
>3j16_B RLI1P; ribosome recycling, translation, eukarya, ribosome; HET: ATP; 7.20A {Saccharomyces cerevisiae}
Probab=97.79 E-value=3.6e-06 Score=78.21 Aligned_cols=54 Identities=31% Similarity=0.748 Sum_probs=39.6
Q ss_pred Ccccccc--ccc-cchhccccc-----cccchhhhhccCCccccccccCCCCCCcchhhhhcCccccccc
Q 027264 122 TGEERCI--ACK-LCEAVCPAQ-----AITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVE 183 (226)
Q Consensus 122 ~~~~~Ci--~Cg-~C~~~CP~~-----ai~~~~~~~~~~~~~~~~~~~d~~~C~~Cg~Cv~~CP~~Ai~~ 183 (226)
++.|+|- .|+ .|.+.||.. +|.++... ....+..+.|++||.|++.||++||..
T Consensus 11 ~~~~~c~~~~~~~~c~~~cp~~~~~~~~~~~~~~~--------~~~~i~~~~c~~~~~~~~~cp~~~i~i 72 (608)
T 3j16_B 11 VSADKCKPKKCRQECKRSCPVVKTGKLCIEVTPTS--------KIAFISEILCIGCGICVKKCPFDAIQI 72 (608)
T ss_dssp ECSSSCCHHHHCSHHHHHCHHHHHTCCSEEEETTT--------TEEEECTTTCCCCCHHHHHCSSCCEEE
T ss_pred EeccccCccccccchhhcCCCccCCceEEEEcCCC--------CceEEehhhccccccccccCCccceEE
Confidence 5667885 575 899999962 34332211 145677789999999999999999964
No 51
>2v2k_A Ferredoxin; iron, transport, iron-sulfur, mycobacterium tuberculosis, Fe cluster, metal-binding, electron transfer, transport; 1.6A {Mycobacterium smegmatis}
Probab=97.19 E-value=0.00013 Score=51.85 Aligned_cols=58 Identities=26% Similarity=0.436 Sum_probs=35.7
Q ss_pred CccccccccccchhccccccccchhhhhccCCccccccccCCCCCCcchhhhhcCcccccccCCCc
Q 027264 122 TGEERCIACKLCEAVCPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNF 187 (226)
Q Consensus 122 ~~~~~Ci~Cg~C~~~CP~~ai~~~~~~~~~~~~~~~~~~~d~~~C~~Cg~Cv~~CP~~Ai~~~~~~ 187 (226)
++.++|++||.|+.+||++||.+.......... ....+.. -.....||.+|+.+++.-
T Consensus 34 ~~~~~C~~Cg~C~~~CP~~Ai~~~~~~~~~~~~---~~~~d~~-----~~~~~~~~~ga~~~g~~~ 91 (105)
T 2v2k_A 34 IHPDECVDCGACEPVCPVEAIYYEDDVPDQWSS---YAQANAD-----FFAELGSPGGASKVGQTD 91 (105)
T ss_dssp ECTTTCCCCCCSGGGCTTCCEEEGGGCCGGGTT---HHHHHHH-----TTTTTCCCSCHHHHCSCS
T ss_pred EeCCcCcchhhHHHhCCccCEEecCCChHHHHH---HHHhchH-----HHhhcCCCcceEEeecCC
Confidence 457899999999999999999876432111000 0011100 012367999999877543
No 52
>3bk7_A ABC transporter ATP-binding protein; ABC ATPase, iron-sulfur cluster, adenosine diphosphate, nucleotide-binding; HET: ADP; 2.80A {Pyrococcus abyssi} PDB: 3j15_B*
Probab=97.14 E-value=0.00013 Score=67.79 Aligned_cols=54 Identities=39% Similarity=0.847 Sum_probs=40.6
Q ss_pred Ccccccc--ccc--cchhccccc-----cccchhhhhccCCccccccccCCCCCCcchhhhhcCccccccc
Q 027264 122 TGEERCI--ACK--LCEAVCPAQ-----AITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVE 183 (226)
Q Consensus 122 ~~~~~Ci--~Cg--~C~~~CP~~-----ai~~~~~~~~~~~~~~~~~~~d~~~C~~Cg~Cv~~CP~~Ai~~ 183 (226)
++.|+|- .|+ .|.+.||.. +|.+++.. ....+....|++||.|+..||..||..
T Consensus 24 ~~~~~c~p~~c~~~~c~~~cp~~~~~~~~~~~~~~~--------~~~~i~e~~c~gc~~~~~~~p~~~i~i 86 (607)
T 3bk7_A 24 IDYDKCNPDKCGHFLCERVCPVNRMGGEAIIIDEEN--------YKPIIQEASCTGCGICVHKCPFNAISI 86 (607)
T ss_dssp CCGGGCCTTTSSSCHHHHHCHHHHTTCCSEEEETTT--------TEEEECTTTCCCCCHHHHHCSSCCCEE
T ss_pred eeccccCCCCCChhhHhhhCCCCcCCceEEEEcCCC--------CcceeeecccCccccccCCCCcceEEE
Confidence 6678995 796 999999962 33333221 134567789999999999999999876
No 53
>1dax_A Ferredoxin I; electron transport, electron-transfer protein, 4Fe-4S cluster; NMR {Desulfovibrio africanus} SCOP: d.58.1.4 PDB: 1dfd_A 1fxr_A
Probab=97.11 E-value=0.00014 Score=46.58 Aligned_cols=27 Identities=33% Similarity=0.795 Sum_probs=22.4
Q ss_pred ccccCCCCCCcchhhhhcCcccccccCC
Q 027264 158 RYDIDMTKCIYCGFCQEACPVDAIVEGP 185 (226)
Q Consensus 158 ~~~~d~~~C~~Cg~Cv~~CP~~Ai~~~~ 185 (226)
.+.+|.+.|++||.|+.+|| +++.+.+
T Consensus 3 ~~~id~~~C~~Cg~C~~~CP-~~~~~~~ 29 (64)
T 1dax_A 3 KFYVDQDECIACESCVEIAP-GAFAMDP 29 (64)
T ss_dssp CCEECSTTCCSCCHHHHHCT-TTEEECS
T ss_pred EEEEccccCCCchHHHHhCC-ccEeEcC
Confidence 34677789999999999999 9887654
No 54
>1rgv_A Ferredoxin; electron transport; 2.90A {Thauera aromatica} SCOP: d.58.1.1
Probab=97.07 E-value=0.0002 Score=48.23 Aligned_cols=25 Identities=36% Similarity=0.757 Sum_probs=21.6
Q ss_pred cCCCCCCcchhhhhcCcccccccCC
Q 027264 161 IDMTKCIYCGFCQEACPVDAIVEGP 185 (226)
Q Consensus 161 ~d~~~C~~Cg~Cv~~CP~~Ai~~~~ 185 (226)
++.+.|++||.|+.+||++||.+.+
T Consensus 3 ~~~~~C~~C~~C~~~CP~~ai~~~~ 27 (80)
T 1rgv_A 3 YINDDCTACDACVEECPNEAITPGD 27 (80)
T ss_dssp CCCSCCCCCCTTTTTCTTCCEECCS
T ss_pred EeCCCCcChhhHHHHcChhccCcCC
Confidence 4557899999999999999998654
No 55
>2fgo_A Ferredoxin; allochromatium vinosum, [4Fe-4S] cluster, reduction potential, iron binding protein electron transport; 1.32A {Pseudomonas aeruginosa}
Probab=97.05 E-value=0.00021 Score=48.34 Aligned_cols=25 Identities=36% Similarity=0.836 Sum_probs=21.5
Q ss_pred cCCCCCCcchhhhhcCcccccccCC
Q 027264 161 IDMTKCIYCGFCQEACPVDAIVEGP 185 (226)
Q Consensus 161 ~d~~~C~~Cg~Cv~~CP~~Ai~~~~ 185 (226)
++.+.|++||.|+.+||++||.+.+
T Consensus 3 ~~~~~C~~C~~C~~~CP~~ai~~~~ 27 (82)
T 2fgo_A 3 KITDDCINCDVCEPECPNGAISQGE 27 (82)
T ss_dssp CCCTTCCCCCTTGGGCTTCCEEECS
T ss_pred eeCCCCCChhhHHHHCChhccCCCC
Confidence 4557899999999999999998654
No 56
>3eun_A Ferredoxin; electron transport, [4Fe-4S] cluster, 4Fe-4S, iron, iron-sulfur, metal-binding, transport; 1.05A {Allochromatium vinosum} SCOP: d.58.1.1 PDB: 1blu_A 3exy_A
Probab=97.02 E-value=0.00019 Score=48.65 Aligned_cols=26 Identities=35% Similarity=0.880 Sum_probs=22.0
Q ss_pred cCCCCCCcchhhhhcCcccccccCCC
Q 027264 161 IDMTKCIYCGFCQEACPVDAIVEGPN 186 (226)
Q Consensus 161 ~d~~~C~~Cg~Cv~~CP~~Ai~~~~~ 186 (226)
++.+.|++||.|+.+||++||.+.+.
T Consensus 3 ~~~~~C~~C~~C~~~CP~~ai~~~~~ 28 (82)
T 3eun_A 3 MITDECINCDVCEPECPNGAISQGDE 28 (82)
T ss_dssp EECTTCCCCCTTGGGCTTCCEEECSS
T ss_pred EeCCCCcCccchHHHCChhheEcCCC
Confidence 45578999999999999999987543
No 57
>2zvs_A Uncharacterized ferredoxin-like protein YFHL; electron transport, [4Fe-4S] clusters, iron-SULF clusters, reduction potential; 1.65A {Escherichia coli}
Probab=96.96 E-value=0.0002 Score=48.81 Aligned_cols=25 Identities=40% Similarity=0.941 Sum_probs=21.4
Q ss_pred cCCCCCCcchhhhhcCcccccccCC
Q 027264 161 IDMTKCIYCGFCQEACPVDAIVEGP 185 (226)
Q Consensus 161 ~d~~~C~~Cg~Cv~~CP~~Ai~~~~ 185 (226)
++.+.|++||.|+.+||++||.+.+
T Consensus 3 ~~~~~C~~C~~C~~~CP~~ai~~~~ 27 (85)
T 2zvs_A 3 LITKKCINCDMCEPECPNEAISMGD 27 (85)
T ss_dssp EECTTCCCCCTTTTTCTTCCEECCS
T ss_pred EeCCcCcChhHHHHHCchhccCcCC
Confidence 3457899999999999999998754
No 58
>2fdn_A Ferredoxin; electron transport, iron-sulfur, 4Fe-4S; 0.94A {Clostridium acidurici} SCOP: d.58.1.1 PDB: 1fdn_A 1fca_A 1clf_A 1dur_A
Probab=96.85 E-value=0.00038 Score=43.16 Aligned_cols=23 Identities=48% Similarity=1.094 Sum_probs=20.3
Q ss_pred CCCCCcchhhhhcCcccccccCC
Q 027264 163 MTKCIYCGFCQEACPVDAIVEGP 185 (226)
Q Consensus 163 ~~~C~~Cg~Cv~~CP~~Ai~~~~ 185 (226)
.+.|++||.|+.+||.+||.+.+
T Consensus 5 ~~~C~~C~~C~~~CP~~ai~~~~ 27 (55)
T 2fdn_A 5 NEACISCGACEPECPVNAISSGD 27 (55)
T ss_dssp CTTCCCCCTTGGGCTTCCEECCS
T ss_pred cccCcChhhHHHHCCccccCcCC
Confidence 46899999999999999997654
No 59
>1iqz_A Ferredoxin; iron-sulfer protein, ultlahigh resolution analysis, geometry of [4Fe-4S] cluster, electron transport; 0.92A {Bacillus thermoproteolyticus} SCOP: d.58.1.4 PDB: 1ir0_A 1wtf_A*
Probab=96.80 E-value=0.00037 Score=46.99 Aligned_cols=26 Identities=35% Similarity=0.599 Sum_probs=21.6
Q ss_pred ccccCCCCCCcchhhhhcCcccccccC
Q 027264 158 RYDIDMTKCIYCGFCQEACPVDAIVEG 184 (226)
Q Consensus 158 ~~~~d~~~C~~Cg~Cv~~CP~~Ai~~~ 184 (226)
.+.+|.+.|++||.|+.+|| +++.++
T Consensus 3 ~v~vd~~~CigCg~C~~~CP-~~~~~~ 28 (81)
T 1iqz_A 3 YTIVDKETCIACGACGAAAP-DIYDYD 28 (81)
T ss_dssp EEEECTTTCCCCSHHHHHCT-TTEEEC
T ss_pred EEEEecccCcccChhhHhCc-hheeeC
Confidence 35678889999999999999 777654
No 60
>1jb0_C Photosystem I iron-sulfur center; membrane protein, multiprotein-pigment complex, photosynthes; HET: CL1 PQN BCR LHG LMG; 2.50A {Synechococcus elongatus} SCOP: d.58.1.2 PDB: 3pcq_C* 1k0t_A 2wsc_C* 2wse_C* 2wsf_C* 3lw5_C* 2o01_C*
Probab=96.67 E-value=0.00026 Score=47.30 Aligned_cols=25 Identities=32% Similarity=0.570 Sum_probs=21.0
Q ss_pred ccCCCCCCcchhhhhcCcccccccC
Q 027264 160 DIDMTKCIYCGFCQEACPVDAIVEG 184 (226)
Q Consensus 160 ~~d~~~C~~Cg~Cv~~CP~~Ai~~~ 184 (226)
.++.+.|++||.|+.+||++|+.+.
T Consensus 4 ~~~~~~C~~Cg~C~~~CP~~a~~~~ 28 (80)
T 1jb0_C 4 VKIYDTCIGCTQCVRACPTDVLEMV 28 (80)
T ss_dssp EEEETTCCCCCHHHHHCTTCCCEEE
T ss_pred cccCCcCcChhHHHHHCCccccccc
Confidence 3455789999999999999999754
No 61
>1xer_A Ferredoxin; electron transport, iron-sulfur, duplication; 2.00A {Sulfolobus tokodaii str} SCOP: d.58.1.3 PDB: 2vkr_A
Probab=96.66 E-value=0.0004 Score=48.89 Aligned_cols=27 Identities=33% Similarity=0.577 Sum_probs=23.1
Q ss_pred ccccCCCCCCcchhhhhcCcccccccC
Q 027264 158 RYDIDMTKCIYCGFCQEACPVDAIVEG 184 (226)
Q Consensus 158 ~~~~d~~~C~~Cg~Cv~~CP~~Ai~~~ 184 (226)
.+.++.+.|++||.|+.+||.+||.+.
T Consensus 37 ~~~id~~~C~~Cg~C~~~CP~~ai~~~ 63 (103)
T 1xer_A 37 IVGVDFDLCIADGSCINACPVNVFQWY 63 (103)
T ss_dssp SEEEETTTCCCCCHHHHHCTTCCCEEE
T ss_pred eEEEehhhCCChhhHHHHcCccCeecc
Confidence 356777899999999999999999754
No 62
>1rof_A Ferredoxin; electron transport, iron-sulfur; NMR {Thermotoga maritima} SCOP: d.58.1.4 PDB: 1vjw_A
Probab=96.56 E-value=0.00083 Score=42.00 Aligned_cols=25 Identities=36% Similarity=0.899 Sum_probs=20.2
Q ss_pred cccCCCCCCcchhhhhcCcccccccC
Q 027264 159 YDIDMTKCIYCGFCQEACPVDAIVEG 184 (226)
Q Consensus 159 ~~~d~~~C~~Cg~Cv~~CP~~Ai~~~ 184 (226)
+.++.+.|++||.|+.+||. ++.+.
T Consensus 3 ~~i~~~~C~~C~~C~~~Cp~-~~~~~ 27 (60)
T 1rof_A 3 VRVDADACIGCGVCENLCPD-VFQLG 27 (60)
T ss_dssp SEECTTTCCSCCSSTTTCTT-TBCCC
T ss_pred EEEchhhCCCChHHHHhCcH-HHeEC
Confidence 45677899999999999997 66543
No 63
>7fd1_A FD1, protein (7-Fe ferredoxin I); electron transport, iron-sulfur; 1.30A {Azotobacter vinelandii} SCOP: d.58.1.2 PDB: 1fda_A 1fdb_A 1fer_A 1axq_A 5fd1_A 6fdr_A 6fd1_A 7fdr_A 1frh_A 1fri_A 1fdd_A 1frl_A 1d3w_A 1frm_A 1frx_A 1g6b_A 1pc4_A 1frj_A 2fd2_A 1fd2_A ...
Probab=96.53 E-value=0.00083 Score=47.69 Aligned_cols=26 Identities=54% Similarity=0.998 Sum_probs=22.6
Q ss_pred Cccccccccccchhccccccccchhh
Q 027264 122 TGEERCIACKLCEAVCPAQAITIEAE 147 (226)
Q Consensus 122 ~~~~~Ci~Cg~C~~~CP~~ai~~~~~ 147 (226)
++.++|++||.|+.+||++||.+...
T Consensus 34 i~~~~C~~Cg~C~~~CP~~ai~~~~~ 59 (106)
T 7fd1_A 34 IHPDECIDCALCEPECPAQAIFSEDE 59 (106)
T ss_dssp ECTTTCCCCCTTGGGCTTCCEEEGGG
T ss_pred ECcccCCChhhhHHhCCChhhhcccc
Confidence 55678999999999999999987654
No 64
>1f2g_A Ferredoxin II; electron transport, FDII desulfovibrio gigas; NMR {Desulfovibrio gigas} SCOP: d.58.1.4 PDB: 1fxd_A
Probab=96.48 E-value=0.00092 Score=41.70 Aligned_cols=23 Identities=26% Similarity=0.801 Sum_probs=19.1
Q ss_pred ccCCCCCCcchhhhhcCcccccccC
Q 027264 160 DIDMTKCIYCGFCQEACPVDAIVEG 184 (226)
Q Consensus 160 ~~d~~~C~~Cg~Cv~~CP~~Ai~~~ 184 (226)
.++ +.|++||.|+.+||. ++.+.
T Consensus 3 ~id-~~C~~C~~C~~~CP~-~~~~~ 25 (58)
T 1f2g_A 3 EVN-DDCMACEACVEICPD-VFEMN 25 (58)
T ss_dssp BCT-TTCCCCCHHHHHCTT-TEEEC
T ss_pred EEC-CcCccchHHHHhCCc-cEEEC
Confidence 567 889999999999998 66543
No 65
>1sj1_A Ferredoxin; thermostability, iron-sulfur cluster, hexammine cobalt(III), electron transport; HET: NCO; 1.50A {Pyrococcus furiosus} SCOP: d.58.1.4 PDB: 1siz_A* 2z8q_A 3pni_A
Probab=96.46 E-value=0.00088 Score=42.76 Aligned_cols=26 Identities=23% Similarity=0.551 Sum_probs=21.4
Q ss_pred ccccCCCCCCcchhhhhcCcccccccC
Q 027264 158 RYDIDMTKCIYCGFCQEACPVDAIVEG 184 (226)
Q Consensus 158 ~~~~d~~~C~~Cg~Cv~~CP~~Ai~~~ 184 (226)
.+.+|.+.|++||.|+.+||. ++.+.
T Consensus 3 ~~~id~~~C~~C~~C~~~Cp~-~~~~~ 28 (66)
T 1sj1_A 3 KVSVDQDTCIGDAICASLCPD-VFEMN 28 (66)
T ss_dssp EEEECTTTCCCCCHHHHHCTT-TEEEC
T ss_pred EEEECcccCcCchHHHHhCCc-eEEEC
Confidence 356777899999999999995 87653
No 66
>1dwl_A Ferredoxin I; electron transfer, model, heteronuclear docking; HET: HEC; NMR {Desulfomicrobium norvegicum} SCOP: i.4.1.1
Probab=96.39 E-value=0.0012 Score=41.10 Aligned_cols=22 Identities=18% Similarity=0.330 Sum_probs=19.6
Q ss_pred ccccccccccchhccccccccc
Q 027264 123 GEERCIACKLCEAVCPAQAITI 144 (226)
Q Consensus 123 ~~~~Ci~Cg~C~~~CP~~ai~~ 144 (226)
+.+.|+.||.|+.+||++||.+
T Consensus 37 ~~~~c~~C~~C~~~CP~~Ai~~ 58 (59)
T 1dwl_A 37 PDSTAECAQDAIDACPVEAISK 58 (59)
T ss_dssp TTCCCGGGGTGGGGSTTCCEEE
T ss_pred ChhhhhHHHHHHHhCCHhhEEc
Confidence 5678999999999999999864
No 67
>1bc6_A 7-Fe ferredoxin; electron transport, iron-sulfur; NMR {Bacillus schlegelii} SCOP: d.58.1.2 PDB: 1bd6_A 1bqx_A 1bwe_A
Probab=96.34 E-value=0.001 Score=44.20 Aligned_cols=25 Identities=44% Similarity=0.761 Sum_probs=21.4
Q ss_pred cCCCCCCc--chhhhhcCcccccccCC
Q 027264 161 IDMTKCIY--CGFCQEACPVDAIVEGP 185 (226)
Q Consensus 161 ~d~~~C~~--Cg~Cv~~CP~~Ai~~~~ 185 (226)
++.+.|++ ||.|+.+||.+||.+.+
T Consensus 3 i~~~~C~~c~C~~C~~~Cp~~ai~~~~ 29 (77)
T 1bc6_A 3 VITEPCIGTKDASCVEVCPVDCIHEGE 29 (77)
T ss_dssp ECCSTTTTCCCCSSTTTCTTCCEEECS
T ss_pred EeCccCCCCCcchhHHhcccccEEeCC
Confidence 45678999 99999999999998654
No 68
>1h98_A Ferredoxin; electron transport, thermophilic, iron-sulfur, azotobacter, hydrogen bonds, stability, high resolution; 1.64A {Thermus aquaticus} SCOP: d.58.1.2
Probab=96.21 E-value=0.00089 Score=44.71 Aligned_cols=25 Identities=36% Similarity=0.696 Sum_probs=21.2
Q ss_pred cCCCCCCc--chhhhhcCcccccccCC
Q 027264 161 IDMTKCIY--CGFCQEACPVDAIVEGP 185 (226)
Q Consensus 161 ~d~~~C~~--Cg~Cv~~CP~~Ai~~~~ 185 (226)
++.+.|++ ||.|+.+||.+||.+.+
T Consensus 3 i~~~~C~~c~C~~C~~~CP~~ai~~~~ 29 (78)
T 1h98_A 3 VICEPCIGVKDQSCVEVCPVECIYDGG 29 (78)
T ss_dssp EECGGGTTTCCCHHHHHCTTCCEEECS
T ss_pred EEchhCCCCCcChhhhhcCccceEcCC
Confidence 45568999 99999999999998654
No 69
>3i9v_9 NADH-quinone oxidoreductase subunit 9; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_8* 2fug_9* 3iam_9* 3ias_9* 3m9s_9*
Probab=96.11 E-value=0.0011 Score=51.35 Aligned_cols=24 Identities=42% Similarity=0.851 Sum_probs=20.6
Q ss_pred cCCCCCCcchhhhhcCcccccccC
Q 027264 161 IDMTKCIYCGFCQEACPVDAIVEG 184 (226)
Q Consensus 161 ~d~~~C~~Cg~Cv~~CP~~Ai~~~ 184 (226)
.+.+.|++||.|+.+||++||.+.
T Consensus 48 ~d~~~Ci~C~~C~~~CP~~ai~~~ 71 (182)
T 3i9v_9 48 NGLEKCIGCSLCAAACPAYAIYVE 71 (182)
T ss_dssp TSCBSCCCCCHHHHHCTTCCEEEE
T ss_pred CCCccCcccccchhhCCcccEEee
Confidence 356789999999999999999654
No 70
>1jnr_B Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.1.5 PDB: 1jnz_B* 2fja_B* 2fjb_B* 2fjd_B* 2fje_B*
Probab=95.89 E-value=0.0021 Score=48.80 Aligned_cols=26 Identities=27% Similarity=0.547 Sum_probs=22.6
Q ss_pred ccCCCCCCcch-----hhhhcCcccccccCC
Q 027264 160 DIDMTKCIYCG-----FCQEACPVDAIVEGP 185 (226)
Q Consensus 160 ~~d~~~C~~Cg-----~Cv~~CP~~Ai~~~~ 185 (226)
.++.+.|++|| .|+.+||.+||.+..
T Consensus 4 ~vd~~~C~~C~~~~~~~C~~~CP~~ai~~~~ 34 (150)
T 1jnr_B 4 FVNPEKCDGCKALERTACEYICPNDLMTLDK 34 (150)
T ss_dssp EECTTTCCSCCSSSSCHHHHHCTTSCEEEET
T ss_pred EECcccCCCCCCcccccchhhcCccCeEEec
Confidence 46778999999 999999999997654
No 71
>3gyx_B Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=95.84 E-value=0.0022 Score=49.51 Aligned_cols=26 Identities=35% Similarity=0.731 Sum_probs=22.7
Q ss_pred ccCCCCCCcch-----hhhhcCcccccccCC
Q 027264 160 DIDMTKCIYCG-----FCQEACPVDAIVEGP 185 (226)
Q Consensus 160 ~~d~~~C~~Cg-----~Cv~~CP~~Ai~~~~ 185 (226)
.+|.+.|++|| .|+.+||.+||.+.+
T Consensus 3 ~id~~~C~gC~~c~~~~C~~~CP~~ai~~~~ 33 (166)
T 3gyx_B 3 YVDPSKCDGCKGGEKTACMYICPNDLMILDP 33 (166)
T ss_dssp EECTTTCCCCCSSSCCHHHHHCTTSCEEEET
T ss_pred EEcchhcCCCCCCCcchhHHhCCccccEEec
Confidence 46778999999 999999999998654
No 72
>1hfe_L Protein (Fe-only hydrogenase (E.C.1.18.99.1) (larger subunit)); hydrogene metabolism, periplasm; 1.60A {Desulfovibrio vulgaris subsp} SCOP: c.96.1.1 d.58.1.5 PDB: 1e08_A* 1gx7_A*
Probab=95.49 E-value=0.0042 Score=55.00 Aligned_cols=27 Identities=41% Similarity=0.786 Sum_probs=23.3
Q ss_pred cccCCCCCCcchhhhhcCcccccccCC
Q 027264 159 YDIDMTKCIYCGFCQEACPVDAIVEGP 185 (226)
Q Consensus 159 ~~~d~~~C~~Cg~Cv~~CP~~Ai~~~~ 185 (226)
+.++.+.|++||.|+.+||.+||....
T Consensus 28 i~~d~~kCi~Cg~C~~~CP~~ai~~~~ 54 (421)
T 1hfe_L 28 VQIDEAKCIGCDTCSQYCPTAAIFGEM 54 (421)
T ss_dssp EEECTTTCCCCCHHHHHCTTCCCBCCT
T ss_pred EEECcccCCCccHHHHhcCcCceeccc
Confidence 457778999999999999999997654
No 73
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=95.08 E-value=0.0074 Score=60.25 Aligned_cols=54 Identities=19% Similarity=0.333 Sum_probs=33.6
Q ss_pred cccccccc-chhccccccccchhhhhccCCccccccccCCCCCCcchhhhhcCccccccc
Q 027264 125 ERCIACKL-CEAVCPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVE 183 (226)
Q Consensus 125 ~~Ci~Cg~-C~~~CP~~ai~~~~~~~~~~~~~~~~~~~d~~~C~~Cg~Cv~~CP~~Ai~~ 183 (226)
+.|.-|.. .--.||.+......+ .. ......++.+.|+.||.|+.+||.+||..
T Consensus 651 ~~~pv~~~~~dG~~p~G~~~~~k~--~i---~~~~p~~d~~kCi~Cg~Cv~vCP~~AI~~ 705 (1231)
T 2c42_A 651 DKLPVSAFEADGRFPLGTSQFEKR--GV---AINVPQWVPENCIQCNQCAFVCPHSAILP 705 (1231)
T ss_dssp GGSCGGGSCTTCCBCTTGGGGTCC--CC---CSEEEEECTTTCCCCCHHHHHCSSCCEEE
T ss_pred CCCCccccCCCCcccCCccccccc--CC---CccceEEeCccCCchhhHHHhCCcccccc
Confidence 44544433 234677764333221 10 11234678899999999999999999974
No 74
>3or1_B Sulfite reductase beta; dissimilatory sulfite reductase, sulfate reduction, oxidored sulfite reduction; HET: SRM; 1.76A {Desulfovibrio gigas} PDB: 3or2_B* 2v4j_B* 2xsj_B*
Probab=94.57 E-value=0.007 Score=53.03 Aligned_cols=27 Identities=26% Similarity=0.716 Sum_probs=23.3
Q ss_pred CCCccccccccccchhccccccccchh
Q 027264 120 YPTGEERCIACKLCEAVCPAQAITIEA 146 (226)
Q Consensus 120 ~~~~~~~Ci~Cg~C~~~CP~~ai~~~~ 146 (226)
+.++.++|+.||.|+.+||.+||....
T Consensus 251 v~id~~~Ci~Cg~C~~~CP~~Ai~~~~ 277 (386)
T 3or1_B 251 VAINNDRCMYCGNCYTMCPALPLSDGT 277 (386)
T ss_dssp EEECTTTCCCCCHHHHHCTTCCCCCTT
T ss_pred cccCCCcCCccccHHHhCcHhhCcCCC
Confidence 457789999999999999999997644
No 75
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=94.48 E-value=0.039 Score=49.54 Aligned_cols=73 Identities=15% Similarity=0.061 Sum_probs=42.0
Q ss_pred hhHhhhhccCCcccCcccccCCC-CCCCCCchhH--HHHHHHHHHHhhhHHHHHHHHHH-------------HhhhHHHH
Q 027264 18 LAVSGQALQGSQHYGLRFNAHPY-SSYFPSKKDD--EEKEQLLKEISKDWSSVFERSIN-------------MLFLTEMV 81 (226)
Q Consensus 18 ~~i~Gha~~gn~~~~~~~~~H~~-~~~~~~~~p~--~~~~~~~~~~~~~v~~~~~~~i~-------------~~~~~~~~ 81 (226)
..+|||++||| +|+. ........+. ++..++.+++.+.+. ++.+++. .....+..
T Consensus 383 ~~~~gH~gdGn--------lH~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~gGsis~EHGiG~~k~~~l~~~~~~~~ 453 (476)
T 3pm9_A 383 PVPFGHLGDGN--------IHYNVSQPVGADKAEFLARWHDVSQVVFEVVL-RLGGSISAEHGIGVMKRDELAEVKDKTA 453 (476)
T ss_dssp EEEEEEGGGTE--------EEEEEECCTTCCHHHHHTTHHHHHHHHHHHHH-HTTCBSCSSSCCTTTTHHHHHHHSCHHH
T ss_pred EEEEEEeCCCc--------eEEEEecCCcCChHHHHHHHHHHHHHHHHHHH-HcCCEEEEcccCchhHHHHHHHhcCHHH
Confidence 67899999999 9983 2222111111 123334444443321 2222111 12223457
Q ss_pred HHHHHHHHHhcCCcceec
Q 027264 82 RGLGLTLKYFFDKKVTIN 99 (226)
Q Consensus 82 ~~l~~~~~~~f~~~~~~~ 99 (226)
..++..+|..|||...+|
T Consensus 454 ~~~m~~iK~~~DP~~ilN 471 (476)
T 3pm9_A 454 IELMRSIKALLDPHGIMN 471 (476)
T ss_dssp HHHHHHHHHHHCTTSCBS
T ss_pred HHHHHHHHHHhCcccCCC
Confidence 889999999999999998
No 76
>3j16_B RLI1P; ribosome recycling, translation, eukarya, ribosome; HET: ATP; 7.20A {Saccharomyces cerevisiae}
Probab=94.20 E-value=0.011 Score=54.90 Aligned_cols=25 Identities=40% Similarity=0.804 Sum_probs=21.7
Q ss_pred Cccccccccccchhccccccccchh
Q 027264 122 TGEERCIACKLCEAVCPAQAITIEA 146 (226)
Q Consensus 122 ~~~~~Ci~Cg~C~~~CP~~ai~~~~ 146 (226)
+.++.|++||.|++.||.+||.+..
T Consensus 50 i~~~~c~~~~~~~~~cp~~~i~i~n 74 (608)
T 3j16_B 50 ISEILCIGCGICVKKCPFDAIQIIN 74 (608)
T ss_dssp ECTTTCCCCCHHHHHCSSCCEEEEE
T ss_pred EehhhccccccccccCCccceEEec
Confidence 5578999999999999999988743
No 77
>3i9v_3 NADH-quinone oxidoreductase subunit 3; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_3* 2fug_3* 3iam_3* 3ias_3* 3m9s_3*
Probab=93.92 E-value=0.013 Score=55.81 Aligned_cols=22 Identities=14% Similarity=0.095 Sum_probs=19.6
Q ss_pred cccccccchhccccccccchhh
Q 027264 126 RCIACKLCEAVCPAQAITIEAE 147 (226)
Q Consensus 126 ~Ci~Cg~C~~~CP~~ai~~~~~ 147 (226)
.|+.||.|+.+||++||.....
T Consensus 219 ~C~~CG~Cv~vCP~gAl~~~~~ 240 (783)
T 3i9v_3 219 PSGFSGNITDICPVGALLDLTA 240 (783)
T ss_dssp CSTTTTTHHHHCSSSSEEEGGG
T ss_pred CCccchhHHhhcccCceecccc
Confidence 6999999999999999987653
No 78
>3mm5_B Sulfite reductase, dissimilatory-type subunit BET; alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A {Archaeoglobus fulgidus} PDB: 3c7b_B* 3mm6_B* 3mm7_B* 3mm8_B* 3mm9_B* 3mma_B* 3mmb_B* 3mmc_B*
Probab=93.91 E-value=0.015 Score=50.55 Aligned_cols=26 Identities=23% Similarity=0.623 Sum_probs=22.4
Q ss_pred CCCccccccccccchhccccccccch
Q 027264 120 YPTGEERCIACKLCEAVCPAQAITIE 145 (226)
Q Consensus 120 ~~~~~~~Ci~Cg~C~~~CP~~ai~~~ 145 (226)
+.++.++|+.||.|+.+||.+||...
T Consensus 234 ~~id~~~C~~Cg~C~~~CP~~Ai~~~ 259 (366)
T 3mm5_B 234 IKVDVEKCMYCGNCYTMCPGMPLFDP 259 (366)
T ss_dssp EEECGGGCCCCCHHHHHCTTCCCCCT
T ss_pred EEEehhhCCCcchHHHhCCHhhcccc
Confidence 45778999999999999999998654
No 79
>3c8y_A Iron hydrogenase 1; dithiomethylether, H-cluster, iron-sulfur binding, oxidoreductase; HET: HCN; 1.39A {Clostridium pasteurianum} SCOP: c.96.1.1 d.15.4.2 d.58.1.5 PDB: 1c4c_A* 1c4a_A* 1feh_A*
Probab=93.81 E-value=0.015 Score=53.47 Aligned_cols=26 Identities=23% Similarity=0.680 Sum_probs=22.6
Q ss_pred CCccccccccccchhccccccccchh
Q 027264 121 PTGEERCIACKLCEAVCPAQAITIEA 146 (226)
Q Consensus 121 ~~~~~~Ci~Cg~C~~~CP~~ai~~~~ 146 (226)
.++.++|+.||.|+.+||++||....
T Consensus 184 ~i~~~~Ci~Cg~Cv~~CP~gAi~~~~ 209 (574)
T 3c8y_A 184 CFDDTNCLLCGQCIIACPVAALSEKS 209 (574)
T ss_dssp CGGGSSCCCCCHHHHHCSSTTEEECC
T ss_pred eechhhCCcchhHHHhhccCCccccc
Confidence 45678999999999999999998754
No 80
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=92.90 E-value=0.021 Score=52.45 Aligned_cols=31 Identities=26% Similarity=0.545 Sum_probs=25.0
Q ss_pred CCCccccccccccchhccccccccchhhhhc
Q 027264 120 YPTGEERCIACKLCEAVCPAQAITIEAEERE 150 (226)
Q Consensus 120 ~~~~~~~Ci~Cg~C~~~CP~~ai~~~~~~~~ 150 (226)
+.++.++|++||.|..+||+++|......++
T Consensus 546 ~~i~~~~Ci~C~~C~~~cp~~~i~~~~p~gg 576 (584)
T 2gmh_A 546 LQINAQNCVHCKTCDIKDPSQNINWVVPEGG 576 (584)
T ss_dssp EEECGGGCCCCCHHHHHCTTCCEEECCCSTT
T ss_pred EEEeCCCCcCCCCchhhCCCCCceeECCCCC
Confidence 3467789999999999999999987655443
No 81
>2wdq_B Succinate dehydrogenase iron-sulfur subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_B* 2acz_B* 1nek_B* 2wdr_B* 2wdv_B* 2ws3_B* 2wu2_B* 2wu5_B* 2wp9_B*
Probab=90.88 E-value=0.06 Score=43.56 Aligned_cols=23 Identities=26% Similarity=0.577 Sum_probs=19.7
Q ss_pred ccCCCCCCcchhhhhcCcccccc
Q 027264 160 DIDMTKCIYCGFCQEACPVDAIV 182 (226)
Q Consensus 160 ~~d~~~C~~Cg~Cv~~CP~~Ai~ 182 (226)
..+...|+.||.|+.+||..++.
T Consensus 143 ~~~~~~Ci~Cg~C~~~CP~~~~~ 165 (238)
T 2wdq_B 143 LDGLYECILCACCSTSCPSFWWN 165 (238)
T ss_dssp TTTTTTCCCCCTTGGGCHHHHHC
T ss_pred HhccccccccCCchhhCcCCccC
Confidence 45678899999999999998764
No 82
>3mm5_A Sulfite reductase, dissimilatory-type subunit ALP; alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A {Archaeoglobus fulgidus} PDB: 3mm6_A* 3mm7_A* 3mm8_A* 3mm9_A* 3mma_A* 3mmb_A* 3mmc_A* 3c7b_A*
Probab=90.81 E-value=0.048 Score=48.19 Aligned_cols=24 Identities=17% Similarity=0.462 Sum_probs=19.9
Q ss_pred CCCccccccccccchhcccccccc
Q 027264 120 YPTGEERCIACKLCEAVCPAQAIT 143 (226)
Q Consensus 120 ~~~~~~~Ci~Cg~C~~~CP~~ai~ 143 (226)
+.++.++|+.||.|+.+||..+..
T Consensus 279 ~~id~~~Ci~Cg~Ci~~CP~~~~~ 302 (418)
T 3mm5_A 279 LTIDNRECVRCMHCINKMPKALKP 302 (418)
T ss_dssp EEECTTTCCCCCHHHHHCTTTEEC
T ss_pred eEEChhhcCccChhHHhCcHhhcc
Confidence 345788999999999999997554
No 83
>1kf6_B Fumarate reductase iron-sulfur protein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.1.2.1 d.15.4.2 PDB: 1kfy_B* 1l0v_B* 2b76_B* 3cir_B* 3p4p_B* 3p4q_B* 3p4r_B* 3p4s_B*
Probab=90.58 E-value=0.043 Score=44.56 Aligned_cols=22 Identities=36% Similarity=0.928 Sum_probs=19.2
Q ss_pred cCCCCCCcchhhhhcCcccccc
Q 027264 161 IDMTKCIYCGFCQEACPVDAIV 182 (226)
Q Consensus 161 ~d~~~C~~Cg~Cv~~CP~~Ai~ 182 (226)
.+...|+.||.|+.+||..++.
T Consensus 143 ~~~~~Ci~Cg~C~~~CP~~~~~ 164 (243)
T 1kf6_B 143 HQFSGCINCGLCYAACPQFGLN 164 (243)
T ss_dssp GGGGCCCCCCHHHHHCHHHHHC
T ss_pred hhhhhccccCccccccCCCccc
Confidence 5667899999999999999874
No 84
>2h88_B Succinate dehydrogenase IP subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_B* 1yq3_B* 2fbw_B* 2h89_B* 2wqy_B* 3aef_B* 3abv_B* 3ae1_B* 3ae3_B* 3ae2_B* 3ae5_B* 3ae6_B* 3ae7_B* 3ae8_B* 3ae9_B* 3aea_B* 3aeb_B* 3aec_B* 3aed_B* 3aee_B* ...
Probab=89.92 E-value=0.081 Score=43.30 Aligned_cols=22 Identities=27% Similarity=0.690 Sum_probs=18.7
Q ss_pred cCCCCCCcchhhhhcCcccccc
Q 027264 161 IDMTKCIYCGFCQEACPVDAIV 182 (226)
Q Consensus 161 ~d~~~C~~Cg~Cv~~CP~~Ai~ 182 (226)
.+...|+.||.|+.+||..++.
T Consensus 153 ~~~~~Ci~CG~C~~~CP~~~~~ 174 (252)
T 2h88_B 153 DGLYECILCACCSTSCPSYWWN 174 (252)
T ss_dssp TTTTTCCCCCTTGGGCHHHHHH
T ss_pred HhHHhchhhCcchhhCCCCccC
Confidence 4567899999999999998753
No 85
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=89.76 E-value=0.085 Score=51.69 Aligned_cols=28 Identities=39% Similarity=0.628 Sum_probs=23.8
Q ss_pred ccccCCCCCCcchhhhhcCcc---cccccCC
Q 027264 158 RYDIDMTKCIYCGFCQEACPV---DAIVEGP 185 (226)
Q Consensus 158 ~~~~d~~~C~~Cg~Cv~~CP~---~Ai~~~~ 185 (226)
...+|.+.|++||.|+.+||. +||.+.+
T Consensus 945 ~~~id~~~C~~Cg~C~~~CP~~~~~ai~~~~ 975 (1025)
T 1gte_A 945 VAVIDEEMCINCGKCYMTCNDSGYQAIQFDP 975 (1025)
T ss_dssp EEEECTTTCCCCCHHHHHHHHHSCSCEEECT
T ss_pred eEEEEcccCcccCHHHHhcCccccCCEEEeC
Confidence 456788899999999999997 8997655
No 86
>2bs2_B Quinol-fumarate reductase iron-sulfur subunit B; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.1.2.1 d.15.4.2 PDB: 2bs3_B* 1e7p_B* 1qlb_B* 2bs4_B*
Probab=89.32 E-value=0.077 Score=43.01 Aligned_cols=21 Identities=33% Similarity=0.958 Sum_probs=18.1
Q ss_pred CCCCCCcchhhhhcCcccccc
Q 027264 162 DMTKCIYCGFCQEACPVDAIV 182 (226)
Q Consensus 162 d~~~C~~Cg~Cv~~CP~~Ai~ 182 (226)
+...|+.||.|+.+||+.++.
T Consensus 147 ~~~~Ci~Cg~C~~~CP~~~~~ 167 (241)
T 2bs2_B 147 ELDRCIECGCCIAACGTKIMR 167 (241)
T ss_dssp HHHTCCCCCHHHHTCHHHHHC
T ss_pred hhhhhhccCcCcccCCCCccC
Confidence 346799999999999999874
No 87
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=88.86 E-value=0.11 Score=47.46 Aligned_cols=74 Identities=11% Similarity=-0.059 Sum_probs=41.7
Q ss_pred hhHhhhhccCCcccCcccccCCCC---CCCCCchhHHHHHHHHHHHhhhHHHHHHHHHH---------Hhhh---HHHHH
Q 027264 18 LAVSGQALQGSQHYGLRFNAHPYS---SYFPSKKDDEEKEQLLKEISKDWSSVFERSIN---------MLFL---TEMVR 82 (226)
Q Consensus 18 ~~i~Gha~~gn~~~~~~~~~H~~~---~~~~~~~p~~~~~~~~~~~~~~v~~~~~~~i~---------~~~~---~~~~~ 82 (226)
..++||+.+|| +|++. .........++..++++++.+.+..-=.+..+ ...+ .+...
T Consensus 454 ~~~~gH~gdGn--------lH~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~eHGiG~~k~~~~~l~~~~~~~~~~g~~~~ 525 (560)
T 1e8g_A 454 FIGTFTVGMRE--------MHHIVCIVFNKKDLIQKRKVQWLMRTLIDDCAANGWGEYRTHLAFMDQIMETYNWNNSSFL 525 (560)
T ss_dssp CCEEEEECSSC--------EEEEEEEEEETTCHHHHHHHHHHHHHHHHHHHHTTCCBSCCCGGGHHHHHHHTCHHHHHHH
T ss_pred eEEEEEecCCe--------EEEEecccCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccccchhHHHHHHHHhccCCHHHH
Confidence 67999999999 99943 22222222223344444444433110000000 1111 34567
Q ss_pred HHHHHHHHhcCCcceec
Q 027264 83 GLGLTLKYFFDKKVTIN 99 (226)
Q Consensus 83 ~l~~~~~~~f~~~~~~~ 99 (226)
.++..+|..|||..++|
T Consensus 526 ~lm~~iK~~~DP~gILN 542 (560)
T 1e8g_A 526 RFNEVLKNAVDPNGIIA 542 (560)
T ss_dssp HHHHHHHHHHCTTCCBC
T ss_pred HHHHHHHHHcCccCCCC
Confidence 88999999999999998
No 88
>3or1_A Sulfite reductase alpha; dissimilatory sulfite reductase, sulfate reduction, oxidored sulfite reduction; HET: SRM; 1.76A {Desulfovibrio gigas} PDB: 3or2_A* 2v4j_A* 2xsj_A*
Probab=87.79 E-value=0.11 Score=46.20 Aligned_cols=23 Identities=17% Similarity=0.463 Sum_probs=19.4
Q ss_pred CCCccccccccccchhccccccc
Q 027264 120 YPTGEERCIACKLCEAVCPAQAI 142 (226)
Q Consensus 120 ~~~~~~~Ci~Cg~C~~~CP~~ai 142 (226)
+.++.++|+.||.|+.+||..+.
T Consensus 296 l~Id~~~C~~Cg~Ci~~CP~al~ 318 (437)
T 3or1_A 296 LSIDNKNCTRCMHCINTMPRALK 318 (437)
T ss_dssp EEECGGGCCCCSHHHHHCTTTEE
T ss_pred EEEccccCCchhhhHhhCcHhhc
Confidence 44678899999999999999554
No 89
>3bk7_A ABC transporter ATP-binding protein; ABC ATPase, iron-sulfur cluster, adenosine diphosphate, nucleotide-binding; HET: ADP; 2.80A {Pyrococcus abyssi} PDB: 3j15_B*
Probab=86.04 E-value=0.19 Score=46.47 Aligned_cols=23 Identities=39% Similarity=0.911 Sum_probs=20.2
Q ss_pred Cccccccccccchhccccccccc
Q 027264 122 TGEERCIACKLCEAVCPAQAITI 144 (226)
Q Consensus 122 ~~~~~Ci~Cg~C~~~CP~~ai~~ 144 (226)
+..+.|++||.|++.||..+|.+
T Consensus 64 i~e~~c~gc~~~~~~~p~~~i~i 86 (607)
T 3bk7_A 64 IQEASCTGCGICVHKCPFNAISI 86 (607)
T ss_dssp ECTTTCCCCCHHHHHCSSCCCEE
T ss_pred eeecccCccccccCCCCcceEEE
Confidence 45678999999999999988776
No 90
>2pa8_D DNA-directed RNA polymerase subunit D; ferredoxin-like Fe-S binding motif, platform for RNA polymer assembly, transferase; 1.76A {Sulfolobus solfataricus} PDB: 2pmz_D 3hkz_D 2waq_D 2wb1_D 2y0s_D
Probab=84.21 E-value=0.24 Score=40.85 Aligned_cols=24 Identities=29% Similarity=0.613 Sum_probs=19.7
Q ss_pred Cccccccccccchhccccccccchh
Q 027264 122 TGEERCIACKLCEAVCPAQAITIEA 146 (226)
Q Consensus 122 ~~~~~Ci~Cg~C~~~CP~~ai~~~~ 146 (226)
.+..+|+.||.|+.+|| +++.+..
T Consensus 198 ~d~~~C~~C~~C~~vCp-~aI~~~~ 221 (265)
T 2pa8_D 198 KNELSCTLCEECLRYCN-GSIRISF 221 (265)
T ss_dssp SCGGGCCCCCHHHHHHT-TSEEEEE
T ss_pred eccccCCCchHHHHhCC-CceEEEe
Confidence 34579999999999999 8887643
No 91
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=84.01 E-value=0.27 Score=44.44 Aligned_cols=74 Identities=8% Similarity=0.042 Sum_probs=42.2
Q ss_pred hhHhhhhccCCcccCcccccCCCC-CCCCCchhH--HHHHHHHHHHhhhHHHHHHHHHH---------HhhhHHHHHHHH
Q 027264 18 LAVSGQALQGSQHYGLRFNAHPYS-SYFPSKKDD--EEKEQLLKEISKDWSSVFERSIN---------MLFLTEMVRGLG 85 (226)
Q Consensus 18 ~~i~Gha~~gn~~~~~~~~~H~~~-~~~~~~~p~--~~~~~~~~~~~~~v~~~~~~~i~---------~~~~~~~~~~l~ 85 (226)
..++||+.+|| +|++. +.+....+. ++..+.++++.+.+...=.+..+ ...+.+....++
T Consensus 423 ~~~~gh~gdGn--------lH~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ehG~G~~k~~~~~~~~~~~~~g~~~~~lm 494 (520)
T 1wvf_A 423 YVAEFIVAPRD--------MHHVIDVLYDRTNPEETKRADACFNELLDEFEKEGYAVYRVNTRFQDRVAQSYGPVKRKLE 494 (520)
T ss_dssp CCEEEEECSSE--------EEEEEEEEEETTCHHHHHHHHHHHHHHHHHHHHTTCCBSCCCGGGHHHHHHHTCHHHHHHH
T ss_pred eeEeecccCcc--------eeeeeccccCCCCHHHHHHHHHHHHHHHHHHHHcCCCccccChhHhhhhhhhcCHHHHHHH
Confidence 56899999999 99842 223222222 23344444444433210000110 112224577899
Q ss_pred HHHHHhcCCcceec
Q 027264 86 LTLKYFFDKKVTIN 99 (226)
Q Consensus 86 ~~~~~~f~~~~~~~ 99 (226)
..+|..|||...+|
T Consensus 495 r~IK~a~DP~~IlN 508 (520)
T 1wvf_A 495 HAIKRAVDPNNILA 508 (520)
T ss_dssp HHHHHHHCTTCCBC
T ss_pred HHHHHHcCCCCCCC
Confidence 99999999999998
No 92
>3kwl_A Uncharacterized protein; putative oxidoreductase, multidomain, unknown function; 1.94A {Helicobacter pylori}
Probab=78.01 E-value=0.37 Score=43.61 Aligned_cols=15 Identities=7% Similarity=0.027 Sum_probs=13.5
Q ss_pred CCCCCcchhhhhcCccc
Q 027264 163 MTKCIYCGFCQEACPVD 179 (226)
Q Consensus 163 ~~~C~~Cg~Cv~~CP~~ 179 (226)
.+.|+.| |..+||++
T Consensus 191 v~~C~~~--C~~~CPk~ 205 (514)
T 3kwl_A 191 VMNFLSV--AHYLYKND 205 (514)
T ss_dssp GGGCCCC--GGGBTTCC
T ss_pred ccccccc--ccccCCCC
Confidence 4679999 99999987
No 93
>3cf4_A Acetyl-COA decarboxylase/synthase alpha subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=76.86 E-value=0.55 Score=44.86 Aligned_cols=22 Identities=32% Similarity=0.844 Sum_probs=18.6
Q ss_pred ccccccccccchhccccccccc
Q 027264 123 GEERCIACKLCEAVCPAQAITI 144 (226)
Q Consensus 123 ~~~~Ci~Cg~C~~~CP~~ai~~ 144 (226)
..+.|+.||.|+.+||+++...
T Consensus 451 ~~~~Ci~Cg~C~~vCP~ga~~~ 472 (807)
T 3cf4_A 451 IHDTCIGCRRCEQVCKKEIPIL 472 (807)
T ss_dssp HHHHCCCCCHHHHHCTTCCCHH
T ss_pred chhhccchhhHHHhCCCCCChH
Confidence 3578999999999999987654
No 94
>3vr8_B Iron-sulfur subunit of succinate dehydrogenase; membrane protein, reductase, mitochondria MEMB oxidoreductase; HET: FAD HEM RQX EPH; 2.81A {Ascaris suum} PDB: 3vrb_B*
Probab=76.51 E-value=0.51 Score=39.35 Aligned_cols=19 Identities=32% Similarity=0.903 Sum_probs=16.2
Q ss_pred CCCCCcchhhhhcCccccc
Q 027264 163 MTKCIYCGFCQEACPVDAI 181 (226)
Q Consensus 163 ~~~C~~Cg~Cv~~CP~~Ai 181 (226)
...|+.||.|..+||+-..
T Consensus 179 ~~~CI~CG~C~~aCP~~~~ 197 (282)
T 3vr8_B 179 LYECILCACCSASCPSYWW 197 (282)
T ss_pred hhhCcccCcCcccCCceec
Confidence 3569999999999998754
No 95
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=68.39 E-value=0.45 Score=42.20 Aligned_cols=20 Identities=30% Similarity=0.898 Sum_probs=16.5
Q ss_pred cccccccccc--chhccccccc
Q 027264 123 GEERCIACKL--CEAVCPAQAI 142 (226)
Q Consensus 123 ~~~~Ci~Cg~--C~~~CP~~ai 142 (226)
..++|+.|+. |...||.+..
T Consensus 18 ~a~rc~~c~~~~C~~~CP~~~~ 39 (456)
T 2vdc_G 18 QANRCSQCGVPFCQVHCPVSNN 39 (456)
T ss_dssp HHHHSCCCSSCHHHHTSTTCCC
T ss_pred HHHhhhcCCCchhhcCCCCCCc
Confidence 3679999985 9999998653
No 96
>1t3q_A Quinoline 2-oxidoreductase small subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: a.56.1.1 d.15.4.2
Probab=56.91 E-value=1.4 Score=33.68 Aligned_cols=54 Identities=19% Similarity=0.243 Sum_probs=29.6
Q ss_pred cccccccccchhccccccccchhhhhccC-CccccccccCCCCCCcchhhhhcCc
Q 027264 124 EERCIACKLCEAVCPAQAITIEAEEREDG-SRRTTRYDIDMTKCIYCGFCQEACP 177 (226)
Q Consensus 124 ~~~Ci~Cg~C~~~CP~~ai~~~~~~~~~~-~~~~~~~~~d~~~C~~Cg~Cv~~CP 177 (226)
...++.||.|...==..+..+....+... ......+..+...|++|+.|+++|-
T Consensus 101 ~~~~~qCG~C~pg~i~~a~~ll~~~~~p~~~~i~~~l~gnlcRCt~y~~~v~A~~ 155 (168)
T 1t3q_A 101 RHHALQCGFCTAGMLATARSILAENPAPSRDEVREVMSGNLCRCTGYETIIDAIT 155 (168)
T ss_dssp HTTCCSSCSSHHHHHHHHHHHHHHCSSCCHHHHHHHGGGSCCSSSCSHHHHHHHT
T ss_pred HhCCCcCCCchHHHHHHHHHHHhcCCCCCHHHHHHHHcCCcccCCCchHHHHHHH
Confidence 34578999998321112222211111111 1111234467889999999999994
No 97
>1igr_A Insulin-like growth factor receptor 1; hormone receptor, insulin receptor family; HET: NAG FUC BMA MAN; 2.60A {Homo sapiens} SCOP: c.10.2.5 c.10.2.5 g.3.9.1
Probab=47.35 E-value=4.1 Score=36.43 Aligned_cols=19 Identities=32% Similarity=1.041 Sum_probs=14.4
Q ss_pred ccccc------ccchhccccccccc
Q 027264 126 RCIAC------KLCEAVCPAQAITI 144 (226)
Q Consensus 126 ~Ci~C------g~C~~~CP~~ai~~ 144 (226)
.|..| |.|+..||.+-..+
T Consensus 217 ~C~aC~~~~~~g~Cv~~CP~~~y~~ 241 (478)
T 1igr_A 217 ACVACRHYYYAGVCVPACPPNTYRF 241 (478)
T ss_dssp SEEEESSEECSSSEESSCCTTCEEE
T ss_pred ceeeeeeeccCCcCcccCCCceeEe
Confidence 48888 69999999865443
No 98
>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E
Probab=37.85 E-value=11 Score=36.14 Aligned_cols=16 Identities=38% Similarity=1.063 Sum_probs=12.9
Q ss_pred cccc------ccchhccccccc
Q 027264 127 CIAC------KLCEAVCPAQAI 142 (226)
Q Consensus 127 Ci~C------g~C~~~CP~~ai 142 (226)
|..| |.|+..||.+-.
T Consensus 225 C~~C~~~~~~~~Cv~~Cp~~~y 246 (897)
T 2dtg_E 225 CVACRNFYLDGRCVETCPPPYY 246 (897)
T ss_dssp EECCSSCBBTTBCCSSCCSSCC
T ss_pred eeECccCccCCcchhhcCCcee
Confidence 8888 789999998644
No 99
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=28.70 E-value=10 Score=34.59 Aligned_cols=21 Identities=24% Similarity=-0.010 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHhcCCcceec
Q 027264 79 EMVRGLGLTLKYFFDKKVTIN 99 (226)
Q Consensus 79 ~~~~~l~~~~~~~f~~~~~~~ 99 (226)
+....++..+|..|||..++|
T Consensus 559 ~~~~~lmr~iK~a~DP~gIlN 579 (584)
T 2uuu_A 559 RGWINVYRSLKETIDPKDICN 579 (584)
T ss_dssp CTHHHHHHHHHHHHCTTCCBS
T ss_pred HHHHHHHHHHHHHcCCCcCCC
Confidence 347789999999999999888
No 100
>2hr7_A Insulin receptor; hormone receptor, leucine rich repeat, transferase; HET: NAG BMA MAN FUC P33; 2.32A {Homo sapiens}
Probab=26.47 E-value=16 Score=32.53 Aligned_cols=16 Identities=38% Similarity=1.063 Sum_probs=12.1
Q ss_pred cccc------ccchhccccccc
Q 027264 127 CIAC------KLCEAVCPAQAI 142 (226)
Q Consensus 127 Ci~C------g~C~~~CP~~ai 142 (226)
|..| |.|+..||.+-.
T Consensus 225 ClsC~~~~~~g~Cv~~CP~g~y 246 (486)
T 2hr7_A 225 CVACRNFYLDGRCVETCPPPYY 246 (486)
T ss_dssp BSSBSSEEETTEEESSCCTTCE
T ss_pred cccCccccCCCccccccCCCeE
Confidence 7777 679999997644
No 101
>2kmz_A Tumor necrosis factor receptor superfamily member; FN14, tweak, TNF receptor, CRD, tnfrsf12A, angiogenesis, APO cell adhesion; NMR {Homo sapiens}
Probab=22.25 E-value=27 Score=20.72 Aligned_cols=13 Identities=23% Similarity=0.971 Sum_probs=9.9
Q ss_pred Cccccccccccch
Q 027264 122 TGEERCIACKLCE 134 (226)
Q Consensus 122 ~~~~~Ci~Cg~C~ 134 (226)
.+.++|+.|..|-
T Consensus 17 ~DLdKCmdcs~C~ 29 (53)
T 2kmz_A 17 ADLDKCMDCASCR 29 (53)
T ss_dssp TTTTCCBCSTTCS
T ss_pred hhhhhhhccccCC
Confidence 4568999997763
Done!