STRING 9.05 
  emb1513 protein (Arabidopsis thaliana) - STRING network view
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
emb1513
emb1513 (embryo defective 1513); copper ion transmembrane transporter; embryo defective 1513 (emb1513); FUNCTIONS IN- copper ion transmembrane transporter activity; INVOLVED IN- embryonic development ending in seed dormancy; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 13 growth stages; BEST Arabidopsis thaliana protein match is- DEAD box RNA helicase, putative (TAIR-AT2G07750.1); Has 26 Blast hits to 26 proteins in 5 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink). (251 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
emb2731
emb2731 (embryo defective 2731); embryo defective 2731 (emb2731); FUNCTIONS IN- molecular_funct [...] (208 aa)
       0.821
emb2735
emb2735 (embryo defective 2735); embryo defective 2735 (emb2735); FUNCTIONS IN- molecular_funct [...] (162 aa)
       0.821
emb2170
emb2170 (embryo defective 2170); embryo defective 2170 (emb2170); FUNCTIONS IN- molecular_funct [...] (248 aa)
       0.821
EMB2743
EMB2743 (EMBRYO DEFECTIVE 2743); EMBRYO DEFECTIVE 2743 (EMB2743); FUNCTIONS IN- molecular_funct [...] (103 aa)
       0.788
MIRO1
MIRO1 (Miro-related GTP-ase 1); GTP binding; Encodes a protein with similarity to GTPases that [...] (648 aa)
       0.659
emb2184
emb2184 (embryo defective 2184); structural constituent of ribosome; embryo defective 2184 (emb [...] (144 aa)
      0.548
AT5G02160
unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biolog [...] (129 aa)
       0.504
AT5G53490
thylakoid lumenal 17.4 kDa protein, chloroplast; thylakoid lumenal 17.4 kDa protein, chloroplas [...] (236 aa)
       0.469
emb2394
emb2394 (embryo defective 2394); structural constituent of ribosome; embryo defective 2394 (emb [...] (223 aa)
      0.462
AT1G73655
FK506 binding / peptidyl-prolyl cis-trans isomerase; FK506 binding / peptidyl-prolyl cis-trans [...] (234 aa)
       0.446
 
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Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
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