Query 027268
Match_columns 225
No_of_seqs 22 out of 24
Neff 1.9
Searched_HMMs 46136
Date Fri Mar 29 07:24:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027268.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/027268hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0342 ATP-dependent RNA heli 98.3 8.3E-08 1.8E-12 92.2 -2.1 136 41-176 117-260 (543)
2 PF09781 NDUF_B5: NADH:ubiquin 74.8 1.9 4.1E-05 37.7 1.7 37 34-70 29-66 (187)
3 PF14147 Spore_YhaL: Sporulati 62.5 15 0.00032 26.8 3.9 26 71-96 23-48 (52)
4 PF02104 SURF1: SURF1 family; 59.1 5.9 0.00013 32.3 1.6 16 60-75 10-25 (212)
5 COG2869 NqrC Na+-transporting 57.4 16 0.00035 33.6 4.2 49 73-143 36-84 (264)
6 cd06662 SURF1 SURF1 superfamil 47.6 17 0.00036 29.0 2.4 16 60-75 3-18 (202)
7 PF09340 NuA4: Histone acetylt 43.4 30 0.00065 25.9 3.1 20 72-91 9-28 (80)
8 PF06864 PAP_PilO: Pilin acces 41.6 27 0.00058 32.0 3.1 20 60-79 180-199 (414)
9 COG4312 Uncharacterized protei 41.5 45 0.00097 30.6 4.4 51 77-135 21-72 (247)
10 PRK13989 cell division topolog 39.9 49 0.0011 25.2 3.8 33 70-102 14-52 (84)
11 PRK13990 cell division topolog 39.3 20 0.00044 28.0 1.7 33 70-102 14-57 (90)
12 TIGR01215 minE cell division t 35.6 80 0.0017 23.7 4.3 33 70-102 14-50 (81)
13 PRK13991 cell division topolog 30.0 1E+02 0.0022 23.8 4.2 32 71-102 16-51 (87)
14 PRK00296 minE cell division to 25.9 1.2E+02 0.0027 23.1 4.0 33 70-102 14-51 (86)
15 PRK13987 cell division topolog 25.3 1.4E+02 0.0031 23.2 4.3 33 70-102 13-49 (91)
16 KOG2507 Ubiquitin regulatory p 24.8 76 0.0016 31.7 3.3 30 66-101 248-277 (506)
17 PF14981 FAM165: FAM165 family 24.7 64 0.0014 23.5 2.1 18 60-77 26-43 (51)
18 PRK13988 cell division topolog 22.0 1.8E+02 0.0038 23.0 4.3 33 70-102 17-53 (97)
19 PF08432 Vfa1: AAA-ATPase Vps4 21.5 69 0.0015 26.7 2.0 18 86-103 148-165 (182)
20 TIGR03455 HisG_C-term ATP phos 21.3 1.8E+02 0.0038 22.5 4.1 45 95-141 42-91 (100)
21 PRK05724 acetyl-CoA carboxylas 21.0 2.4E+02 0.0052 26.2 5.6 61 82-144 33-94 (319)
No 1
>KOG0342 consensus ATP-dependent RNA helicase pitchoune [RNA processing and modification]
Probab=98.27 E-value=8.3e-08 Score=92.20 Aligned_cols=136 Identities=17% Similarity=-0.008 Sum_probs=124.1
Q ss_pred CCCCc-eEEeeCCCcccCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCchhhccCCCCCC
Q 027268 41 DHPKS-TVIRMGGGPRTYPGGVSKWQWKRMQAKKGKQLLKARLCRERHIYEMRKRAELKAAVSELERPWEAVEKAPNLFS 119 (225)
Q Consensus 41 ~~~~~-~~irMGGGPRTFPGGvsKWQWKRMqeKKAkqk~k~~L~rErQLYe~R~Raeiraa~~~lerPwe~~~~ap~l~~ 119 (225)
++-.+ ++..+.|+++||+..+..|||..+...+.+..-.++++...+-+.|++.+|.++.+.+.+.+|....-..+.++
T Consensus 117 l~gkDvl~~AKTGtGKTlAFLiPaie~l~k~~~~~r~~~~vlIi~PTRELA~Q~~~eak~Ll~~h~~~~v~~viGG~~~~ 196 (543)
T KOG0342|consen 117 LEGKDVLAAAKTGTGKTLAFLLPAIELLRKLKFKPRNGTGVLIICPTRELAMQIFAEAKELLKYHESITVGIVIGGNNFS 196 (543)
T ss_pred CCCccceeeeccCCCceeeehhHHHHHHHhcccCCCCCeeEEEecccHHHHHHHHHHHHHHHhhCCCcceEEEeCCccch
Confidence 33334 44569999999999999999999999999999999999999999999999999999999999998888899999
Q ss_pred CChhHHHHHhhhhhcCCCcccCCCCCCCC-------ccccCCCCCCCccccCCcceeeccccch
Q 027268 120 VSADEQVKVLADRFQRPGGFDLWTESDGP-------QMFETPDGLPSARFFPKGVVHSVKPYGL 176 (225)
Q Consensus 120 ~sade~iKaLADRF~kpGa~DLWn~~DGP-------~~f~~~~~~psarffpk~~vhsvkpy~~ 176 (225)
+.++...|.....+.+||....|-+|+.+ +++-..+++..+..|+..+.|.|+++.+
T Consensus 197 ~e~~kl~k~~niliATPGRLlDHlqNt~~f~~r~~k~lvlDEADrlLd~GF~~di~~Ii~~lpk 260 (543)
T KOG0342|consen 197 VEADKLVKGCNILIATPGRLLDHLQNTSGFLFRNLKCLVLDEADRLLDIGFEEDVEQIIKILPK 260 (543)
T ss_pred HHHHHhhccccEEEeCCchHHhHhhcCCcchhhccceeEeecchhhhhcccHHHHHHHHHhccc
Confidence 99999999999999999999999999999 4445567899999999999999999975
No 2
>PF09781 NDUF_B5: NADH:ubiquinone oxidoreductase, NDUFB5/SGDH subunit; InterPro: IPR019173 Members of this family mediate the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone, the reaction that occurs being: NADH + ubiquinone = NAD(+) + ubiquinol [, ].
Probab=74.80 E-value=1.9 Score=37.75 Aligned_cols=37 Identities=24% Similarity=0.156 Sum_probs=25.2
Q ss_pred eeecCCCCCCCceEEeeC-CCcccCCCCcchhHHHHHH
Q 027268 34 VSFNNNHDHPKSTVIRMG-GGPRTYPGGVSKWQWKRMQ 70 (225)
Q Consensus 34 l~~~~~~~~~~~~~irMG-GGPRTFPGGvsKWQWKRMq 70 (225)
..+.+...+++-.|+.+| .|+|+|+=-.|.|||+|..
T Consensus 29 ~~~~~~~~~~~~~vr~~~~Hg~r~f~ikps~~~~~rfk 66 (187)
T PF09781_consen 29 GLFNTLGFPRKVPVRHSSDHGKRMFVIKPSRFQDNRFK 66 (187)
T ss_pred chhcccCCccccccccCCCCCceeEEECcchhHHHHHH
Confidence 334444445554444465 4899999999999998854
No 3
>PF14147 Spore_YhaL: Sporulation protein YhaL
Probab=62.50 E-value=15 Score=26.82 Aligned_cols=26 Identities=23% Similarity=0.350 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 027268 71 AKKGKQLLKARLCRERHIYEMRKRAE 96 (225)
Q Consensus 71 eKKAkqk~k~~L~rErQLYe~R~Rae 96 (225)
++..++.+..++++|=++|-.|++.|
T Consensus 23 ~~eE~~~dq~~IEkEGevymeR~e~e 48 (52)
T PF14147_consen 23 AKEEREIDQEFIEKEGEVYMERMEEE 48 (52)
T ss_pred HHHHHHhHHHHHHHhHHHHHHHHHHH
Confidence 45677888999999999999999876
No 4
>PF02104 SURF1: SURF1 family; InterPro: IPR002994 The surfeit locus 1 gene (SURF1 or surf-1) encodes a conserved protein of about 300 amino-acid residues that seems to be involved in the biogenesis of cytochrome c oxidase []. Vertebrate SURF1 is evolutionary related to yeast protein SHY1. There seems to be two transmembrane regions in these proteins, one in the N-terminal, the other in the C-terminal. Rickettsia prowazekii protein RP733 is also a member of this protein family.; GO: 0016020 membrane
Probab=59.07 E-value=5.9 Score=32.31 Aligned_cols=16 Identities=38% Similarity=0.592 Sum_probs=13.0
Q ss_pred CcchhHHHHHHHHHHH
Q 027268 60 GVSKWQWKRMQAKKGK 75 (225)
Q Consensus 60 GvsKWQWKRMqeKKAk 75 (225)
++.-|||.|+|+|++-
T Consensus 10 ~LG~WQl~R~~~K~~l 25 (212)
T PF02104_consen 10 GLGFWQLDRAQWKQAL 25 (212)
T ss_pred HHCHHHhCHHHHHHHH
Confidence 4668999999999763
No 5
>COG2869 NqrC Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC [Energy production and conversion]
Probab=57.36 E-value=16 Score=33.63 Aligned_cols=49 Identities=29% Similarity=0.310 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCchhhccCCCCCCCChhHHHHHhhhhhcCCCcccCCC
Q 027268 73 KGKQLLKARLCRERHIYEMRKRAELKAAVSELERPWEAVEKAPNLFSVSADEQVKVLADRFQRPGGFDLWT 143 (225)
Q Consensus 73 KAkqk~k~~L~rErQLYe~R~Raeiraa~~~lerPwe~~~~ap~l~~~sade~iKaLADRF~kpGa~DLWn 143 (225)
|..|.|.++|++.|||- +++++..| -.....|+.+.++|.+|-=.||=+
T Consensus 36 kp~Q~e~~~lDkq~~iL----------~vAgll~~------------~~~~~ei~~~f~~~Ie~rlvDlqt 84 (264)
T COG2869 36 KPIQEEQALLDKQKQIL----------SVAGLLDP------------KVSNTEIKEYFANFIEPRLVDLQT 84 (264)
T ss_pred ChHHHHHHHHhhhhhHH----------HHhhccCc------------cccchHHHHHHHhhccceeEeccC
Confidence 46788999999999875 46667555 245678999999999999999854
No 6
>cd06662 SURF1 SURF1 superfamily. Surf1/Shy1 has been implicated in the posttranslational steps of the biogenesis of the mitochondrially-encoded Cox1 subunit of cytochrome c oxidase (complex IV). Cytochrome c oxidase (complex IV), the terminal electron-transferring complex of the respiratory chain, is an assemblage of nuclear and mitochondrially-encoded subunits. Its assembly is mediated by nuclear encoded assembly factors, one of which is Surf1/Shy1. Mutations in human Surf1 are a major cause of Leigh syndrome, a severe neurodegenerative disorder.
Probab=47.59 E-value=17 Score=29.04 Aligned_cols=16 Identities=31% Similarity=0.586 Sum_probs=13.2
Q ss_pred CcchhHHHHHHHHHHH
Q 027268 60 GVSKWQWKRMQAKKGK 75 (225)
Q Consensus 60 GvsKWQWKRMqeKKAk 75 (225)
++.-||+.|.++|.+.
T Consensus 3 ~LG~WQl~R~~~K~~l 18 (202)
T cd06662 3 GLGFWQLQRAEWKEAL 18 (202)
T ss_pred cccHHHHhHHHHHHHH
Confidence 5678999999998754
No 7
>PF09340 NuA4: Histone acetyltransferase subunit NuA4; InterPro: IPR015418 The NuA4 histone acetyltransferase (HAT) multisubunit complex is responsible for acetylation of histone H4 and H2A N-terminal tails in yeast []. NuA4 complexes are highly conserved in eukaryotes and play primary roles in transcription, cellular response to DNA damage, and cell cycle control [].
Probab=43.42 E-value=30 Score=25.88 Aligned_cols=20 Identities=35% Similarity=0.466 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 027268 72 KKGKQLLKARLCRERHIYEM 91 (225)
Q Consensus 72 KKAkqk~k~~L~rErQLYe~ 91 (225)
++.+++++.+..-|+|||+.
T Consensus 9 ~~k~~Le~~L~~lE~qIy~~ 28 (80)
T PF09340_consen 9 QKKKKLEKDLAALEKQIYDK 28 (80)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 45577888999999999975
No 8
>PF06864 PAP_PilO: Pilin accessory protein (PilO); InterPro: IPR009663 This family consists of several enterobacterial PilO proteins. The function of PilO is unknown although it has been suggested that it is a cytoplasmic protein in the absence of other Pil proteins, but PilO protein is translocated to the outer membrane in the presence of other Pil proteins. Alternatively, PilO protein may form a complex with other Pil protein(s). PilO has been predicted to function as a component of the pilin transport apparatus and thin-pilus basal body []. This family does not seem to be related to IPR007445 from INTERPRO.
Probab=41.57 E-value=27 Score=31.97 Aligned_cols=20 Identities=20% Similarity=0.521 Sum_probs=11.3
Q ss_pred CcchhHHHHHHHHHHHHHHH
Q 027268 60 GVSKWQWKRMQAKKGKQLLK 79 (225)
Q Consensus 60 GvsKWQWKRMqeKKAkqk~k 79 (225)
|..=|.|...|++++.+.+.
T Consensus 180 ~~g~~~~~~~~~~~~~~a~~ 199 (414)
T PF06864_consen 180 GYGWWYWQAQQEEARRAAAA 199 (414)
T ss_pred HHHHHHhhhhhhHHHHHHHH
Confidence 33456787766665554433
No 9
>COG4312 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=41.52 E-value=45 Score=30.63 Aligned_cols=51 Identities=29% Similarity=0.401 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHhcccCCCchhhccCCCCCCCChhHHHHHhhhhhcC
Q 027268 77 LLKARLCRERHIYEMRKR-AELKAAVSELERPWEAVEKAPNLFSVSADEQVKVLADRFQR 135 (225)
Q Consensus 77 k~k~~L~rErQLYe~R~R-aeiraa~~~lerPwe~~~~ap~l~~~sade~iKaLADRF~k 135 (225)
.-+++|.+||+|-.+|-+ ++.|-+| ||..+.++=-.-..+. =+.|||=|--
T Consensus 21 AR~~lL~kEkeLtR~rd~vaaeRR~L-----Pw~~V~K~Y~Fe~~~G---~~sLadLF~g 72 (247)
T COG4312 21 AREALLAKEKELTRARDAVAAERRAL-----PWGEVDKDYVFETENG---KKSLADLFGG 72 (247)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC-----CcceecceeEeecCCc---chhHHHHhCC
Confidence 346789999998655543 3444455 7977765432112222 2678887753
No 10
>PRK13989 cell division topological specificity factor MinE; Provisional
Probab=39.85 E-value=49 Score=25.19 Aligned_cols=33 Identities=30% Similarity=0.271 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHhc
Q 027268 70 QAKKGKQLLKARLCRERHI------YEMRKRAELKAAVS 102 (225)
Q Consensus 70 qeKKAkqk~k~~L~rErQL------Ye~R~Raeiraa~~ 102 (225)
-+..||++++-.|.+||.- |-..+|.||-+.++
T Consensus 14 Sa~vAKeRLqiiLa~dR~~~~~~p~~l~~lk~dil~VIs 52 (84)
T PRK13989 14 TASVAKERLQIIIAHERVGGRQPPDYLPALQKELVAVIS 52 (84)
T ss_pred cHHHHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHHHHH
Confidence 4678999999999999964 88899999998886
No 11
>PRK13990 cell division topological specificity factor MinE; Provisional
Probab=39.33 E-value=20 Score=27.99 Aligned_cols=33 Identities=18% Similarity=0.184 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHhc
Q 027268 70 QAKKGKQLLKARLCRERHI-----------YEMRKRAELKAAVS 102 (225)
Q Consensus 70 qeKKAkqk~k~~L~rErQL-----------Ye~R~Raeiraa~~ 102 (225)
-+..||++++-.|.+||.- |-.-+|.||.+.++
T Consensus 14 Sa~vAKeRLqiiLaheR~~~~~~~~~~~pd~L~~lk~eIl~VI~ 57 (90)
T PRK13990 14 SASVAKERLQIIVAHQRSELHPRSSKISSHLLAELKDEIIEVVK 57 (90)
T ss_pred cHHHHHHHhheeeeeecccCCcccccCCHHHHHHHHHHHHHHHH
Confidence 3677999999999999963 88999999998885
No 12
>TIGR01215 minE cell division topological specificity factor MinE. This protein is involved in the process of cell division. This protein prevents the proteins MinC and MinD to inhibit cell division at internal sites, but allows inhibiton at polar sites. This allows for correct cell division at the proper sites.
Probab=35.62 E-value=80 Score=23.71 Aligned_cols=33 Identities=30% Similarity=0.329 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHhc
Q 027268 70 QAKKGKQLLKARLCRERH----IYEMRKRAELKAAVS 102 (225)
Q Consensus 70 qeKKAkqk~k~~L~rErQ----LYe~R~Raeiraa~~ 102 (225)
-+..||++++-.|.+||. =|-..+|.+|.+.++
T Consensus 14 Sa~~AKeRLq~iL~~dR~~~~p~~l~~mk~dil~VIs 50 (81)
T TIGR01215 14 SAEVAKDRLKLILAHDRAQLAPEYLEELRKEILEVIS 50 (81)
T ss_pred cHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 367899999999999997 366788999988886
No 13
>PRK13991 cell division topological specificity factor MinE; Provisional
Probab=30.03 E-value=1e+02 Score=23.83 Aligned_cols=32 Identities=22% Similarity=0.239 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHhc
Q 027268 71 AKKGKQLLKARLCRERH----IYEMRKRAELKAAVS 102 (225)
Q Consensus 71 eKKAkqk~k~~L~rErQ----LYe~R~Raeiraa~~ 102 (225)
+.-||++++-.|.+||. =|---+|.||-+.++
T Consensus 16 a~~AKeRLqliLahdR~~~~p~~l~~lk~eil~VIs 51 (87)
T PRK13991 16 SELAKQRLLTVLVHDRVKLTPEMMEQMKADLAEVIK 51 (87)
T ss_pred HHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence 66899999999999995 466788899988775
No 14
>PRK00296 minE cell division topological specificity factor MinE; Reviewed
Probab=25.91 E-value=1.2e+02 Score=23.09 Aligned_cols=33 Identities=24% Similarity=0.316 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHhc
Q 027268 70 QAKKGKQLLKARLCRERHI-----YEMRKRAELKAAVS 102 (225)
Q Consensus 70 qeKKAkqk~k~~L~rErQL-----Ye~R~Raeiraa~~ 102 (225)
-+..||++++-.|.+||.- |...+|.+|.+.++
T Consensus 14 Sa~~AKeRLq~iL~~dR~~~~~p~~l~~lk~dIl~VIs 51 (86)
T PRK00296 14 TANVAKERLQIIVAHERSSRGEPDYLPQLRKEILEVIA 51 (86)
T ss_pred cHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence 3677999999999999872 67788888888775
No 15
>PRK13987 cell division topological specificity factor MinE; Provisional
Probab=25.28 E-value=1.4e+02 Score=23.22 Aligned_cols=33 Identities=18% Similarity=0.128 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHhc
Q 027268 70 QAKKGKQLLKARLCRERH----IYEMRKRAELKAAVS 102 (225)
Q Consensus 70 qeKKAkqk~k~~L~rErQ----LYe~R~Raeiraa~~ 102 (225)
-+..||++++-.|.+||. =|---+|.||.+.++
T Consensus 13 Sa~~AKeRLq~iLa~dR~~~sp~~l~~lk~eIl~VI~ 49 (91)
T PRK13987 13 SKDVAKERLKLILIHDRGDISPDVLEMIKEDILKVIS 49 (91)
T ss_pred cHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence 467899999999999993 355678889988885
No 16
>KOG2507 consensus Ubiquitin regulatory protein UBXD2, contains UAS and UBX domains [General function prediction only]
Probab=24.78 E-value=76 Score=31.69 Aligned_cols=30 Identities=27% Similarity=0.329 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 027268 66 WKRMQAKKGKQLLKARLCRERHIYEMRKRAELKAAV 101 (225)
Q Consensus 66 WKRMqeKKAkqk~k~~L~rErQLYe~R~Raeiraa~ 101 (225)
-|||+|...++++..+-++| ||+++|.+-.
T Consensus 248 tkrm~eqrkrer~e~~aare------RI~aqiaadr 277 (506)
T KOG2507|consen 248 TKRMREQRKRERKEGTAARE------RILAQIAADR 277 (506)
T ss_pred HHHHHHHHHHHHHhhHHHHH------HHHHHhhccH
Confidence 47888888888888888887 4555554433
No 17
>PF14981 FAM165: FAM165 family
Probab=24.74 E-value=64 Score=23.54 Aligned_cols=18 Identities=44% Similarity=0.510 Sum_probs=14.6
Q ss_pred CcchhHHHHHHHHHHHHH
Q 027268 60 GVSKWQWKRMQAKKGKQL 77 (225)
Q Consensus 60 GvsKWQWKRMqeKKAkqk 77 (225)
||--||-||+.+|..++.
T Consensus 26 gvK~yQ~krlEak~~k~~ 43 (51)
T PF14981_consen 26 GVKMYQRKRLEAKLKKLE 43 (51)
T ss_pred hHHHHHHHHHHHHHHHHH
Confidence 788899999998876653
No 18
>PRK13988 cell division topological specificity factor MinE; Provisional
Probab=21.98 E-value=1.8e+02 Score=23.00 Aligned_cols=33 Identities=21% Similarity=0.257 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHhc
Q 027268 70 QAKKGKQLLKARLCRERH----IYEMRKRAELKAAVS 102 (225)
Q Consensus 70 qeKKAkqk~k~~L~rErQ----LYe~R~Raeiraa~~ 102 (225)
-+..||++++-.|.+||. =|-.-+|.+|.+.++
T Consensus 17 Sa~~AK~RLk~iL~~dR~~~sp~~l~~mk~dIl~VIs 53 (97)
T PRK13988 17 SASTARERLQLVLAHDRADLSPELLEQMRKEILEVVA 53 (97)
T ss_pred cHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHH
Confidence 356799999999999994 467788999988886
No 19
>PF08432 Vfa1: AAA-ATPase Vps4-associated protein 1; InterPro: IPR013640 This is a family of fungal proteins of unknown function.
Probab=21.46 E-value=69 Score=26.66 Aligned_cols=18 Identities=22% Similarity=0.477 Sum_probs=14.3
Q ss_pred HHHHHHHHHHHHHHHhcc
Q 027268 86 RHIYEMRKRAELKAAVSE 103 (225)
Q Consensus 86 rQLYe~R~Raeiraa~~~ 103 (225)
+.+|+||++...++.++.
T Consensus 148 k~~yq~Rl~~~r~~e~~k 165 (182)
T PF08432_consen 148 KDFYQMRLDRKRNAEMAK 165 (182)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 478999999888877753
No 20
>TIGR03455 HisG_C-term ATP phosphoribosyltransferase, C-terminal domain. This domain corresponds to the C-terminal third of the HisG protein. It is absent in many lineages.
Probab=21.32 E-value=1.8e+02 Score=22.46 Aligned_cols=45 Identities=27% Similarity=0.464 Sum_probs=33.4
Q ss_pred HHHHHHhcccCCCchhhccCC--C---CCCCChhHHHHHhhhhhcCCCcccC
Q 027268 95 AELKAAVSELERPWEAVEKAP--N---LFSVSADEQVKVLADRFQRPGGFDL 141 (225)
Q Consensus 95 aeiraa~~~lerPwe~~~~ap--~---l~~~sade~iKaLADRF~kpGa~DL 141 (225)
.++.+.++++.-| -+++-. + ...|.+.+++..+.|.-..-||.|+
T Consensus 42 ~~v~~ilPg~~~P--TVs~l~~~~w~AV~~vv~~~~v~~~~~~Lk~~GA~~I 91 (100)
T TIGR03455 42 DEVRALLPGLEGP--TVSPLADEGWVAVHAVVDEKVVNELIDKLKAAGARDI 91 (100)
T ss_pred HHHHHhcCCCCCC--CcCcCCCCCeEEEEEEEcHHHHHHHHHHHHHcCCCeE
Confidence 6677788888777 344321 2 3366799999999999999999875
No 21
>PRK05724 acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated
Probab=21.00 E-value=2.4e+02 Score=26.22 Aligned_cols=61 Identities=18% Similarity=0.211 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccCCCchhhccCCCCC-CCChhHHHHHhhhhhcCCCcccCCCC
Q 027268 82 LCRERHIYEMRKRAELKAAVSELERPWEAVEKAPNLF-SVSADEQVKVLADRFQRPGGFDLWTE 144 (225)
Q Consensus 82 L~rErQLYe~R~Raeiraa~~~lerPwe~~~~ap~l~-~~sade~iKaLADRF~kpGa~DLWn~ 144 (225)
+..|-+..|.+.....+... ....||+.+..+-+.. |-. -+-|..|+|-|..-.+.-+|.+
T Consensus 33 ~~~~~~~l~~~~~~~~~~~~-~~l~~w~~v~~ar~~~Rp~~-~d~I~~l~d~f~El~gdr~~~d 94 (319)
T PRK05724 33 LSEEIERLEKKLEELTKKIY-SNLTPWQKVQLARHPQRPYT-LDYIELLFTDFTELHGDRAFAD 94 (319)
T ss_pred HHHHHHHHHHHHHHHHHHHh-cCCCHHHhhhcccCCCCCCH-HHHHHHHhhHHHHHcCCcCCCC
Confidence 45565556655444434333 3446999887555433 444 5899999999987776666664
Done!