Query         027269
Match_columns 225
No_of_seqs    165 out of 1426
Neff          5.6 
Searched_HMMs 29240
Date          Mon Mar 25 12:00:39 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027269.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027269hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 2haq_A Cyclophilin; rotamase,  100.0 8.3E-44 2.9E-48  298.2  14.7  130   95-225     5-134 (172)
  2 2z6w_A Peptidyl-prolyl CIS-tra 100.0 1.6E-43 5.3E-48  294.4  15.5  125  101-225     3-127 (165)
  3 2cmt_A Peptidyl-prolyl CIS-tra 100.0 2.1E-43 7.2E-48  295.6  15.5  128   98-225     7-134 (172)
  4 3ich_A Peptidyl-prolyl CIS-tra 100.0 1.6E-43 5.5E-48  300.2  14.4  130   96-225    10-139 (188)
  5 2r99_A Peptidyl-prolyl CIS-tra 100.0 4.6E-43 1.6E-47  293.7  15.6  127   99-225     9-135 (173)
  6 3pmp_A Cyclophilin A; peptidyl 100.0 7.1E-43 2.4E-47  289.9  15.3  125  101-225     2-126 (164)
  7 2igv_A Peptidyl-prolyl CIS-tra 100.0 5.3E-43 1.8E-47  293.2  14.6  126  100-225     2-134 (173)
  8 1a58_A Cyclophilin; isomerase, 100.0 8.4E-43 2.9E-47  293.0  15.8  125  100-225     5-138 (177)
  9 2wfi_A Peptidyl-prolyl CIS-tra 100.0 1.1E-42 3.9E-47  292.7  15.6  125  100-225     8-141 (179)
 10 2he9_A NK-tumor recognition pr 100.0 1.3E-42 4.3E-47  295.6  15.6  129   96-225    14-151 (192)
 11 2poy_A Peptidyl-prolyl CIS-tra 100.0 1.1E-42 3.8E-47  294.6  14.7  128   98-225    16-150 (186)
 12 4fru_A Cyclophilin B, peptidyl 100.0 1.3E-42 4.5E-47  293.4  14.7  129   97-225     8-136 (185)
 13 1qng_A Peptidyl-prolyl CIS-tra 100.0 1.6E-42 5.5E-47  289.6  13.8  125  100-225     2-133 (170)
 14 3rdd_A Peptidyl-prolyl CIS-tra 100.0 6.9E-42 2.4E-46  289.2  14.7  130   96-225    17-146 (184)
 15 2c3b_A Ppiase, cyclophilin; is 100.0 2.7E-42 9.4E-47  288.8   9.5  125  100-225     2-131 (172)
 16 3k2c_A Peptidyl-prolyl CIS-tra 100.0 2.5E-41 8.6E-46  287.7  15.5  127   99-225    25-151 (193)
 17 1mzw_A Cyclophilin H, U-snRNP- 100.0 2.1E-41 7.1E-46  284.6  14.4  127   99-225     8-139 (177)
 18 1z81_A Cyclophilin; structural 100.0   1E-40 3.5E-45  290.7  14.5  128   98-225    56-188 (229)
 19 1ihg_A Cyclophilin 40; ppiase  100.0   3E-40   1E-44  299.8  15.4  125  101-225    15-147 (370)
 20 2ose_A Probable peptidyl-proly 100.0 2.9E-39 9.9E-44  282.3  12.5  126   98-225    11-168 (234)
 21 2fu0_A Cyclophilin, putative;  100.0 5.1E-38 1.7E-42  260.2  11.4  110  112-225    11-121 (160)
 22 2x7k_A Peptidyl-prolyl CIS-tra 100.0 6.2E-38 2.1E-42  261.0  11.9  116  101-225    11-127 (166)
 23 2ok3_A Peptidyl-prolyl CIS-tra 100.0 6.3E-38 2.1E-42  259.6  11.5  109  113-225     7-116 (161)
 24 2hq6_A Serologically defined c 100.0   1E-37 3.5E-42  264.0  13.1  122   95-225    18-140 (185)
 25 2poe_A Cyclophilin-like protei 100.0 5.1E-38 1.8E-42  265.8  10.8  116  105-225    16-136 (185)
 26 2a2n_A Peptidylprolyl isomeras 100.0 5.3E-38 1.8E-42  263.8   9.9  110  112-225    27-137 (176)
 27 1w74_A Peptidyl-prolyl CIS-tra 100.0 6.3E-37 2.2E-41  260.4  14.1  115  101-225    23-151 (191)
 28 1zkc_A Peptidyl-prolyl CIS-tra 100.0 4.7E-37 1.6E-41  262.3  13.3  109  113-225    26-135 (197)
 29 2b71_A Cyclophilin-like protei 100.0 5.1E-37 1.7E-41  261.9  12.8  117  100-225    37-154 (196)
 30 2k7n_A Peptidyl-prolyl CIS-tra 100.0 1.3E-36 4.4E-41  260.7  12.5  116  101-225    11-127 (203)
 31 3bkp_A Cyclophilin; malaria, i 100.0 2.4E-36 8.3E-41  263.6  13.3  123   94-225    14-153 (232)
 32 3bo7_A Peptidyl-prolyl CIS-tra 100.0   3E-36   1E-40  257.8  12.8  109  113-225    13-134 (201)
 33 1v9t_A Cyclophilin B; beta bar 100.0 3.4E-35 1.2E-39  244.2  13.4  113  100-223     3-116 (166)
 34 1lop_A Cyclophilin A; rotamase 100.0 6.8E-35 2.3E-39  241.9  10.6  105  112-223     5-111 (164)
 35 3s6m_A Peptidyl-prolyl CIS-tra 100.0 5.1E-34 1.7E-38  237.0  10.5  105  113-223    10-115 (167)
 36 3rfy_A Peptidyl-prolyl CIS-tra 100.0 1.6E-32 5.5E-37  253.1   6.7  123   98-225   165-327 (369)
 37 3kop_A Uncharacterized protein  72.2     4.1 0.00014   34.0   4.4   32  105-138    23-55  (188)
 38 2nnz_A Hypothetical protein; b  67.7     4.5 0.00015   32.5   3.7   30  106-138    32-61  (153)

No 1  
>2haq_A Cyclophilin; rotamase, proline, isomerase, CIS-trans, protozoa, KAla-AZAR.; 1.97A {Leishmania donovani} PDB: 3eov_A* 3bt8_A
Probab=100.00  E-value=8.3e-44  Score=298.24  Aligned_cols=130  Identities=60%  Similarity=1.004  Sum_probs=123.9

Q ss_pred             hhcccccceEEEEEEECCeeceeEEEEEcCCCChhhHHHHHHHhhCCCCcccCCCeEEEeecCceeecCccccCCCCCCc
Q 027269           95 ELQAKVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGI  174 (225)
Q Consensus        95 ~~~~~~~~~vf~di~v~~t~~G~IvIeL~~~~aP~tv~NFl~L~~G~kG~~Y~gt~FhRVip~f~IQgGd~~~~~g~gg~  174 (225)
                      ..++.++++|||||.+++++.|+|+||||.+.||+||+||++||+|++||+|+|+.||||+|+|||||||+..++|.|+.
T Consensus         5 ~~~~~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~   84 (172)
T 2haq_A            5 HHEPEVTAKVYFDVMIDSEPLGRITIGLFGKDAPLTTENFRQLCTGEHGFGYKDSIFHRVIQNFMIQGGDFTNFDGTGGK   84 (172)
T ss_dssp             --CCCCCEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBCCEEETTTEEEECCTTTSSSSCCC
T ss_pred             cCCCCCCCeEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHhccCCCcccCCCEEEEEECCCEEecCCccCCCCCCCc
Confidence            35688899999999999999999999999999999999999999999999999999999999999999998778999999


Q ss_pred             cccCCCCCCCccCccCCCceEEEEecCCCCCCCceEEEEcCCCCcccCCCC
Q 027269          175 SIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKVRWQLCFFC  225 (225)
Q Consensus       175 si~g~~~~dE~~~l~H~~~G~LsMa~~gpns~gSQFfItl~~~p~LDg~~~  225 (225)
                      ++||+.|++|++.++|. +|+|||||.+||+|+||||||+.++|||||+|.
T Consensus        85 si~g~~f~dE~~~l~h~-~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~  134 (172)
T 2haq_A           85 SIYGEKFADENLNVKHF-VGALSMANAGPNTNGSQFFITTAPTPWLDGRHV  134 (172)
T ss_dssp             CSSSSCBCCCCCCSCCC-TTEEEECCSSTTCBCSCEEEESSCCGGGTTTSC
T ss_pred             cccCCcccCcCCCcccC-ceEEEEccCCCCCcccEEEEECCCCCccCCCEe
Confidence            99999999999999998 999999999999999999999999999999874


No 2  
>2z6w_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin D; HET: BMT MLE CIT; 0.96A {Homo sapiens} SCOP: b.62.1.1 PDB: 3rcg_A* 3r49_A* 3r54_A 3r56_A* 3r57_A* 3r59_A* 3rcf_A* 3r4g_A* 3rci_X* 3rck_X* 3rcl_A* 3rd9_X* 3rda_X* 3rdb_A* 3rdc_A* 2bit_X 2biu_X 3qyu_A 3k0m_A 1ak4_A* ...
Probab=100.00  E-value=1.6e-43  Score=294.42  Aligned_cols=125  Identities=70%  Similarity=1.170  Sum_probs=121.2

Q ss_pred             cceEEEEEEECCeeceeEEEEEcCCCChhhHHHHHHHhhCCCCcccCCCeEEEeecCceeecCccccCCCCCCccccCCC
Q 027269          101 TTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGSS  180 (225)
Q Consensus       101 ~~~vf~di~v~~t~~G~IvIeL~~~~aP~tv~NFl~L~~G~kG~~Y~gt~FhRVip~f~IQgGd~~~~~g~gg~si~g~~  180 (225)
                      +++|||||.+++++.|+|+||||.+.||+||+||++||+|++||+|+|+.||||+|+|||||||++.++|+|+.++||+.
T Consensus         3 ~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgGd~~~~~g~gg~si~g~~   82 (165)
T 2z6w_A            3 NPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSR   82 (165)
T ss_dssp             CCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBEEEEETTTEEEECCTTTSSSSCCCBTTBSC
T ss_pred             CCEEEEEEEECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCCCccCcCCEEEEEECCCEEEeCCccCCCCCCCCcccCCc
Confidence            68999999999999999999999999999999999999999999999999999999999999999888999999999999


Q ss_pred             CCCCccCccCCCceEEEEecCCCCCCCceEEEEcCCCCcccCCCC
Q 027269          181 FEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKVRWQLCFFC  225 (225)
Q Consensus       181 ~~dE~~~l~H~~~G~LsMa~~gpns~gSQFfItl~~~p~LDg~~~  225 (225)
                      |++|++.++|+++|+|||||.+||+++||||||+.++|||||+|.
T Consensus        83 f~dE~~~l~h~~~G~lsmA~~gp~s~~SQFfI~~~~~~~Ldg~~~  127 (165)
T 2z6w_A           83 FPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHV  127 (165)
T ss_dssp             BCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSC
T ss_pred             ccCcccccccCCCCEEEEeeCCCCCcccEEEEEcCCCcccCCCee
Confidence            999999999999999999999999999999999999999999874


No 3  
>2cmt_A Peptidyl-prolyl CIS-trans isomerase E; rotamase activity, rotamase, RNA-binding, cyclosporin, cyclophilin, beta-barrel; 1.50A {Schistosoma mansoni} PDB: 2ck1_A
Probab=100.00  E-value=2.1e-43  Score=295.61  Aligned_cols=128  Identities=64%  Similarity=1.131  Sum_probs=121.9

Q ss_pred             ccccceEEEEEEECCeeceeEEEEEcCCCChhhHHHHHHHhhCCCCcccCCCeEEEeecCceeecCccccCCCCCCcccc
Q 027269           98 AKVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIY  177 (225)
Q Consensus        98 ~~~~~~vf~di~v~~t~~G~IvIeL~~~~aP~tv~NFl~L~~G~kG~~Y~gt~FhRVip~f~IQgGd~~~~~g~gg~si~  177 (225)
                      +..+++|||||.+++|+.|+|+||||.+.||+||+||++||++++||+|+|+.||||+|+|||||||+..++|+|+.++|
T Consensus         7 ~~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~G~gg~si~   86 (172)
T 2cmt_A            7 KRNLPRVFFDIRIGNGDAGRIVMELRSDIVPRTAENFRALCTGERGFGYHNCCFHRVIPQFMCQGGDFVKGDGTGGKSIY   86 (172)
T ss_dssp             --CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBEEEEETTTEEEECCTTTSSSSCCCBTT
T ss_pred             CCCCCEEEEEEEECCeecceEEEEEcCCCCCHHHHHHHHHhccCCCceECCCEEEEEECCCEEEcCCccCCCCCCCCccC
Confidence            45688999999999999999999999999999999999999988899899999999999999999999888999999999


Q ss_pred             CCCCCCCccCccCCCceEEEEecCCCCCCCceEEEEcCCCCcccCCCC
Q 027269          178 GSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKVRWQLCFFC  225 (225)
Q Consensus       178 g~~~~dE~~~l~H~~~G~LsMa~~gpns~gSQFfItl~~~p~LDg~~~  225 (225)
                      |+.|++|++.++|+++|+|||||.+||+++||||||+.++|||||+|.
T Consensus        87 g~~f~dE~~~l~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~t  134 (172)
T 2cmt_A           87 GRKFDDENFQLRHEGFGVLSMANSGPNTNGSQFFICTTKCDWLDGKHV  134 (172)
T ss_dssp             BSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSC
T ss_pred             CCcccccccCcccCCceEEEEeeCCCCCcccEEEEECCCCCccCCCee
Confidence            999999999999999999999999999999999999999999999874


No 4  
>3ich_A Peptidyl-prolyl CIS-trans isomerase B; beta sandwich, cyclosporin, endoplasmic reticulum, glycoprot isomerase, rotamase; 1.20A {Homo sapiens} PDB: 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00  E-value=1.6e-43  Score=300.17  Aligned_cols=130  Identities=65%  Similarity=1.079  Sum_probs=124.7

Q ss_pred             hcccccceEEEEEEECCeeceeEEEEEcCCCChhhHHHHHHHhhCCCCcccCCCeEEEeecCceeecCccccCCCCCCcc
Q 027269           96 LQAKVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGIS  175 (225)
Q Consensus        96 ~~~~~~~~vf~di~v~~t~~G~IvIeL~~~~aP~tv~NFl~L~~G~kG~~Y~gt~FhRVip~f~IQgGd~~~~~g~gg~s  175 (225)
                      ..+.++++|||||.+++|+.|+|+||||.+.||+||+||++||+|++||+|+|+.||||+|+|||||||+..++|+|+.+
T Consensus        10 ~~p~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~s   89 (188)
T 3ich_A           10 KGPKVTVKVYFDLRIGDEDVGRVIFGLFGKTVPKTVDNFVALATGEKGFGYKNSKFHRVIKDFMIQGGDFTRGDGTGGKS   89 (188)
T ss_dssp             CSCEEEEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBCCEEETTTEEEECCTTTSSSSCCCB
T ss_pred             CCCCcCCeEEEEEEECCEeceeEEEEEcCCCCcHHHHHHHHHhcccCCccccCCEEEEEECCCEEEcCCccCCCCCCCcc
Confidence            45778999999999999999999999999999999999999999999999999999999999999999977789999999


Q ss_pred             ccCCCCCCCccCccCCCceEEEEecCCCCCCCceEEEEcCCCCcccCCCC
Q 027269          176 IYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKVRWQLCFFC  225 (225)
Q Consensus       176 i~g~~~~dE~~~l~H~~~G~LsMa~~gpns~gSQFfItl~~~p~LDg~~~  225 (225)
                      +||+.|++|++.++|+++|+|||||.+||+|+||||||+.++|||||+|.
T Consensus        90 i~g~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~t  139 (188)
T 3ich_A           90 IYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHV  139 (188)
T ss_dssp             TTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSC
T ss_pred             ccCCcccccccCcccCCCeEEEEccCCCCCcccEEEEECCCCcccCCCee
Confidence            99999999999999999999999999999999999999999999999874


No 5  
>2r99_A Peptidyl-prolyl CIS-trans isomerase E; CIS-trans isomerization, structural genomics consortium, SGC, alternative splicing, mRNA processing; 1.61A {Homo sapiens} SCOP: b.62.1.1 PDB: 3uch_A 1zmf_A
Probab=100.00  E-value=4.6e-43  Score=293.73  Aligned_cols=127  Identities=63%  Similarity=1.072  Sum_probs=121.8

Q ss_pred             cccceEEEEEEECCeeceeEEEEEcCCCChhhHHHHHHHhhCCCCcccCCCeEEEeecCceeecCccccCCCCCCccccC
Q 027269           99 KVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYG  178 (225)
Q Consensus        99 ~~~~~vf~di~v~~t~~G~IvIeL~~~~aP~tv~NFl~L~~G~kG~~Y~gt~FhRVip~f~IQgGd~~~~~g~gg~si~g  178 (225)
                      ..+++|||||.+++|+.|+|+||||.+.||+||+||++||+|++||+|+|+.||||+|+|||||||++.++|+|+.++||
T Consensus         9 ~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g   88 (173)
T 2r99_A            9 RSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYG   88 (173)
T ss_dssp             -CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBEEEEETTTEEEECCTTTSSSSCCCBTTB
T ss_pred             cCCCEEEEEEEECCccceeEEEEECCCCCcHHHHHHHHHhcccCCceecCCEEEEeeCCCEEEeCCcCCCCCCCCCccCC
Confidence            44789999999999999999999999999999999999999999988999999999999999999999889999999999


Q ss_pred             CCCCCCccCccCCCceEEEEecCCCCCCCceEEEEcCCCCcccCCCC
Q 027269          179 SSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKVRWQLCFFC  225 (225)
Q Consensus       179 ~~~~dE~~~l~H~~~G~LsMa~~gpns~gSQFfItl~~~p~LDg~~~  225 (225)
                      +.|++|++.++|+++|+|||||.+||+++||||||+.++|||||+|.
T Consensus        89 ~~f~dE~~~l~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~t  135 (173)
T 2r99_A           89 KKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHV  135 (173)
T ss_dssp             SCBCCCCCCSCCCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSC
T ss_pred             CcccCcccCcccCCCcEEEEccCCCCCcccEEEEECCCCCccCCCee
Confidence            99999999999999999999999999999999999999999999874


No 6  
>3pmp_A Cyclophilin A; peptidyl prolyl isomerase, isomerase-immunosuppressant compl; HET: BMT; 1.47A {Moniliophthora perniciosa} SCOP: b.62.1.1 PDB: 3o7t_A
Probab=100.00  E-value=7.1e-43  Score=289.93  Aligned_cols=125  Identities=58%  Similarity=1.019  Sum_probs=121.2

Q ss_pred             cceEEEEEEECCeeceeEEEEEcCCCChhhHHHHHHHhhCCCCcccCCCeEEEeecCceeecCccccCCCCCCccccCCC
Q 027269          101 TTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGSS  180 (225)
Q Consensus       101 ~~~vf~di~v~~t~~G~IvIeL~~~~aP~tv~NFl~L~~G~kG~~Y~gt~FhRVip~f~IQgGd~~~~~g~gg~si~g~~  180 (225)
                      +++|||||.+++|+.|+|+||||.+.||+||+||++||+|++||+|+|+.||||+|+|||||||+..++|.|+.++||+.
T Consensus         2 ~p~vf~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgGd~~~~~g~gg~si~g~~   81 (164)
T 3pmp_A            2 MANVFFNISINDKPEGRIVFKLYDEAVPKTAKNFRELATGQHGFGYKDSIFHRVIPQFMLQGGDFTRHNGTGGKSIYGEK   81 (164)
T ss_dssp             CCCEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBEEEEETTTEEEECCTTTSSSSCCCBTTBSC
T ss_pred             CCEEEEEEEECCEEeeEEEEEEeCCCCcHHHHHHHHHhcccCCCcccCCEEEEEECCCeEEeCCCCCCCCCCCcccCCcc
Confidence            67899999999999999999999999999999999999999999999999999999999999998778999999999999


Q ss_pred             CCCCccCccCCCceEEEEecCCCCCCCceEEEEcCCCCcccCCCC
Q 027269          181 FEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKVRWQLCFFC  225 (225)
Q Consensus       181 ~~dE~~~l~H~~~G~LsMa~~gpns~gSQFfItl~~~p~LDg~~~  225 (225)
                      +++|++.++|+++|+|||||.+||+++||||||+.++|||||+|.
T Consensus        82 ~~dE~~~l~h~~~G~lsma~~g~~t~~SQFfIt~~~~~~Ld~~~~  126 (164)
T 3pmp_A           82 FADENFQVKHTKPGLLSMANAGANTNGSQFFITTVPTSWLDGKHV  126 (164)
T ss_dssp             BCCCCCCSCCCSTTEEEECBSSTTCBCSCEEEESSCCGGGTTTSC
T ss_pred             ccccccccCcCCCcEEEEeeCCCCCcccEEEEECCCChhhCCCcc
Confidence            999999999999999999999999999999999999999999874


No 7  
>2igv_A Peptidyl-prolyl CIS-trans isomerase 3; rotamase; 1.67A {Caenorhabditis elegans} SCOP: b.62.1.1 PDB: 1e3b_A 1e8k_A 1dyw_A 2igw_A 2hqj_A
Probab=100.00  E-value=5.3e-43  Score=293.22  Aligned_cols=126  Identities=71%  Similarity=1.196  Sum_probs=120.0

Q ss_pred             ccceEEEEEEECCeeceeEEEEEcCCCChhhHHHHHHHhhCCCCcc-------cCCCeEEEeecCceeecCccccCCCCC
Q 027269          100 VTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYG-------YKGCSFHRIIKDFMIQGGDFTEGDGTG  172 (225)
Q Consensus       100 ~~~~vf~di~v~~t~~G~IvIeL~~~~aP~tv~NFl~L~~G~kG~~-------Y~gt~FhRVip~f~IQgGd~~~~~g~g  172 (225)
                      .+++|||||.+++++.|+|+||||.+.||+||+||++||++++|++       |+|+.||||+|+|||||||++.++|+|
T Consensus         2 ~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G~g   81 (173)
T 2igv_A            2 SRSKVFFDITIGGKASGRIVMELYDDVVPKTAGNFRALCTGENGIGKSGKPLHFKGSKFHRIIPNFMIQGGDFTRGNGTG   81 (173)
T ss_dssp             CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTSSSSC
T ss_pred             CCCEEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHhcCCCCCCccCccceECCCEEEEEECCCEEEcCCCCCCCCCC
Confidence            3689999999999999999999999999999999999999887832       999999999999999999998889999


Q ss_pred             CccccCCCCCCCccCccCCCceEEEEecCCCCCCCceEEEEcCCCCcccCCCC
Q 027269          173 GISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKVRWQLCFFC  225 (225)
Q Consensus       173 g~si~g~~~~dE~~~l~H~~~G~LsMa~~gpns~gSQFfItl~~~p~LDg~~~  225 (225)
                      +.++||+.|++|++.++|+++|+|||||.+||+|+||||||+.++|||||+|.
T Consensus        82 g~siyg~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~  134 (173)
T 2igv_A           82 GESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTEWLDGKHV  134 (173)
T ss_dssp             CCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSC
T ss_pred             CCccCCCcccCcccccCCCCCeEEEEeeCCCCCcceEEEEEcCCccccCCCee
Confidence            99999999999999999999999999999999999999999999999999874


No 8  
>1a58_A Cyclophilin; isomerase, ppiase; 1.95A {Brugia malayi} SCOP: b.62.1.1 PDB: 1a33_A 1c5f_A*
Probab=100.00  E-value=8.4e-43  Score=292.95  Aligned_cols=125  Identities=60%  Similarity=0.989  Sum_probs=119.3

Q ss_pred             ccceEEEEEEECCeeceeEEEEEcCCCChhhHHHHHHHhhCCCC---------cccCCCeEEEeecCceeecCccccCCC
Q 027269          100 VTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKG---------YGYKGCSFHRIIKDFMIQGGDFTEGDG  170 (225)
Q Consensus       100 ~~~~vf~di~v~~t~~G~IvIeL~~~~aP~tv~NFl~L~~G~kG---------~~Y~gt~FhRVip~f~IQgGd~~~~~g  170 (225)
                      .+++|||||.+++++.|+|+||||.+.||+||+||++||+|++|         | |+|+.||||+|+|||||||++.++|
T Consensus         5 ~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~~~~g~~~~-Y~g~~FhRvi~~f~iQgGd~~~~~g   83 (177)
T 1a58_A            5 DRRRVFLDVTIDGNLAGRIVMELYNDIAPRTCNNFLMLCTGMAGTGKISGKPLH-YKGSTFHRVIKNFMIQGGDFTKGDG   83 (177)
T ss_dssp             GCEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBCC-CTTCBEEEEETTTEEEECCCSSSSS
T ss_pred             CCcEEEEEEEECCEeceeEEEEEcCCCCchHHHHHHHHhcCCcCcccccCCcce-eCCCEEEEEECCCEEEeCCccCCCC
Confidence            47899999999999999999999999999999999999997553         6 9999999999999999999988899


Q ss_pred             CCCccccCCCCCCCccCccCCCceEEEEecCCCCCCCceEEEEcCCCCcccCCCC
Q 027269          171 TGGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKVRWQLCFFC  225 (225)
Q Consensus       171 ~gg~si~g~~~~dE~~~l~H~~~G~LsMa~~gpns~gSQFfItl~~~p~LDg~~~  225 (225)
                      +|+.++||+.|++|++.++|+++|+|||||.+||+|+||||||+.++|||||+|.
T Consensus        84 ~gg~si~g~~f~dE~~~~~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~  138 (177)
T 1a58_A           84 TGGESIYGGMFDDEEFVMKHDEPFVVSMANKGPNTNGSQFFITTTPAPHLNNIHV  138 (177)
T ss_dssp             SCCCCTTSSCBCCCCCCSCCCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSC
T ss_pred             CCCCcccCCcccCcccCcccCCCeEEEEeeCCCCCceeEEEEECCCCCccCCCEE
Confidence            9999999999999999999999999999999999999999999999999999874


No 9  
>2wfi_A Peptidyl-prolyl CIS-trans isomerase G; phosphoprotein, PRE-mRNA splicing, alternative splicing, nucleus, rotamase, cyclosporin; HET: OCS; 0.75A {Homo sapiens} PDB: 2wfj_A* 2gw2_A
Probab=100.00  E-value=1.1e-42  Score=292.75  Aligned_cols=125  Identities=59%  Similarity=0.991  Sum_probs=119.5

Q ss_pred             ccceEEEEEEECCeeceeEEEEEcCCCChhhHHHHHHHhhCCCC---------cccCCCeEEEeecCceeecCccccCCC
Q 027269          100 VTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKG---------YGYKGCSFHRIIKDFMIQGGDFTEGDG  170 (225)
Q Consensus       100 ~~~~vf~di~v~~t~~G~IvIeL~~~~aP~tv~NFl~L~~G~kG---------~~Y~gt~FhRVip~f~IQgGd~~~~~g  170 (225)
                      .+++|||||.+++|+.|+|+||||.+.||+||+||++||+|++|         | |+|+.||||+|+|||||||++.++|
T Consensus         8 ~~~~vf~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~~-Y~g~~FhRvi~~f~iQgGd~~~~~g   86 (179)
T 2wfi_A            8 QRPRCFFDIAINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLH-YKSCLFHRVVKDFMVQGGDFSEGNG   86 (179)
T ss_dssp             CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSC-CTTCBEEEEETTTEEEECCTTTSSS
T ss_pred             CCCeEEEEEEECCccceEEEEEEcCCCCChHHHHHHHHhcCCcCcccccccCCe-ECCCEEEEEECCCEEEcccccCCCC
Confidence            47899999999999999999999999999999999999987654         6 9999999999999999999988899


Q ss_pred             CCCccccCCCCCCCccCccCCCceEEEEecCCCCCCCceEEEEcCCCCcccCCCC
Q 027269          171 TGGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKVRWQLCFFC  225 (225)
Q Consensus       171 ~gg~si~g~~~~dE~~~l~H~~~G~LsMa~~gpns~gSQFfItl~~~p~LDg~~~  225 (225)
                      +|+.++||..|++|++.++|+++|+|||||.+||+|+||||||+.++|||||+|.
T Consensus        87 ~gg~si~g~~f~dE~~~~~h~~~G~lsMAn~gp~tngSQFfIt~~~~~~LDg~~t  141 (179)
T 2wfi_A           87 RGGESIYGGFFEDESFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHV  141 (179)
T ss_dssp             SCCCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSC
T ss_pred             CCCCcccCCcccccccCcCcCCCeEEEEEeCCCCCcceEEEEEcCCCcccCCCee
Confidence            9999999999999999999999999999999999999999999999999999874


No 10 
>2he9_A NK-tumor recognition protein; cyclosporin, isomerase, membrane, repeat, rotamase, peptidylprolyl isomerase, structural genomics; 2.00A {Homo sapiens}
Probab=100.00  E-value=1.3e-42  Score=295.59  Aligned_cols=129  Identities=52%  Similarity=0.894  Sum_probs=119.3

Q ss_pred             hcccccceEEEEEEECCeeceeEEEEEcCCCChhhHHHHHHHhhCCC---------CcccCCCeEEEeecCceeecCccc
Q 027269           96 LQAKVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEK---------GYGYKGCSFHRIIKDFMIQGGDFT  166 (225)
Q Consensus        96 ~~~~~~~~vf~di~v~~t~~G~IvIeL~~~~aP~tv~NFl~L~~G~k---------G~~Y~gt~FhRVip~f~IQgGd~~  166 (225)
                      +....+++|||||.++++++|+|+||||.+.||+||+||++||+|++         +| |+|+.||||+|+|||||||++
T Consensus        14 ~~~~~~~~vf~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~k~~~-Y~g~~FhRVi~~fmiQgGd~~   92 (192)
T 2he9_A           14 LVPRGSPQCHFDIEINREPVGRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLC-YKGSTFHRVVKNFMIQGGDFS   92 (192)
T ss_dssp             -----CCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSC-CTTCBEEEEETTTEEEECCTT
T ss_pred             ccccCCCeEEEEEEECCEecceEEEEEcCCCCchHHHHHHHHhcCCCCcccccccCCe-ECCCEEEEEECCCEEEcCccc
Confidence            44567999999999999999999999999999999999999998765         46 999999999999999999998


Q ss_pred             cCCCCCCccccCCCCCCCccCccCCCceEEEEecCCCCCCCceEEEEcCCCCcccCCCC
Q 027269          167 EGDGTGGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKVRWQLCFFC  225 (225)
Q Consensus       167 ~~~g~gg~si~g~~~~dE~~~l~H~~~G~LsMa~~gpns~gSQFfItl~~~p~LDg~~~  225 (225)
                      .++|.|+.++||+.|++|++.++|+++|+|||||.+||+|+||||||+.++|||||+|.
T Consensus        93 ~~~G~gg~siyg~~f~dE~~~l~h~~~G~lsMAn~gp~tngSQFFIt~~~~~~LDg~~t  151 (192)
T 2he9_A           93 EGNGKGGESIYGGYFKDENFILKHDRAFLLSMANRGKHTNGSQFFITTKPAPHLDGVHV  151 (192)
T ss_dssp             TSSSSCCCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSC
T ss_pred             CCCCCCCCcccCCcccCccccCCCCCCeEEEEEeCCCCCcceEEEEEcCCCcccCCCcc
Confidence            88999999999999999999999999999999999999999999999999999999874


No 11 
>2poy_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, isomerase, S genomics, structural genomics consortium; HET: BMT; 1.80A {Cryptosporidium parvum iowa II} PDB: 2plu_A*
Probab=100.00  E-value=1.1e-42  Score=294.61  Aligned_cols=128  Identities=66%  Similarity=1.050  Sum_probs=120.9

Q ss_pred             ccccceEEEEEEECCeeceeEEEEEcCCCChhhHHHHHHHhhCCCCcc-------cCCCeEEEeecCceeecCccccCCC
Q 027269           98 AKVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYG-------YKGCSFHRIIKDFMIQGGDFTEGDG  170 (225)
Q Consensus        98 ~~~~~~vf~di~v~~t~~G~IvIeL~~~~aP~tv~NFl~L~~G~kG~~-------Y~gt~FhRVip~f~IQgGd~~~~~g  170 (225)
                      ...+++|||||.+++++.|+|+||||.+.||+||+||++||+|++||+       |+|+.||||+|+|||||||++.++|
T Consensus        16 ~~~~~~v~~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~Y~g~~FhRVi~~f~iQgGd~~~~~G   95 (186)
T 2poy_A           16 FQGNPVVYFDISIGQTPAGRITMELFADKVPITAENFRALCTGEKGMGQSGKPLCYTGSFFHRIIPQFMIQGGDFTRGDG   95 (186)
T ss_dssp             --CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTSSS
T ss_pred             cCCCCEEEEEEeECCEecccEEEEEeCCCCcHHHHHHHHHhcccCCccccCccceECCCEEEEEeCCCEEEeCCCCCCCC
Confidence            456899999999999999999999999999999999999999988886       9999999999999999999988899


Q ss_pred             CCCccccCCCCCCCccCccCCCceEEEEecCCCCCCCceEEEEcCCCCcccCCCC
Q 027269          171 TGGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKVRWQLCFFC  225 (225)
Q Consensus       171 ~gg~si~g~~~~dE~~~l~H~~~G~LsMa~~gpns~gSQFfItl~~~p~LDg~~~  225 (225)
                      +|+.++||+.|++|++.++|+++|+|||||.+||+|+||||||+.++|||||+|.
T Consensus        96 ~gg~si~g~~f~dE~~~l~h~~~G~lsMAn~gpntngSQFFIt~~~~~~LDg~~t  150 (186)
T 2poy_A           96 TGGESIYGSKFRDENFVYTHDAPFLLSMANAGPNTNGSQFFITTVPCPWLDGKHV  150 (186)
T ss_dssp             SCCCCTTC-CBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSC
T ss_pred             CCCCccCCCcccCcccccccCCCcEEEEeeCCCCCcccEEEEECCCCcccCCCee
Confidence            9999999999999999999999999999999999999999999999999999874


No 12 
>4fru_A Cyclophilin B, peptidyl-prolyl CIS-trans isomerase; cyclophilin-type ppiase, peptidyl-prolyl CIS-trans isomerase chaperone, foldase; HET: ME2 PEG; 1.10A {Equus caballus} PDB: 4frv_A* 3ich_A 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00  E-value=1.3e-42  Score=293.43  Aligned_cols=129  Identities=66%  Similarity=1.093  Sum_probs=124.0

Q ss_pred             cccccceEEEEEEECCeeceeEEEEEcCCCChhhHHHHHHHhhCCCCcccCCCeEEEeecCceeecCccccCCCCCCccc
Q 027269           97 QAKVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISI  176 (225)
Q Consensus        97 ~~~~~~~vf~di~v~~t~~G~IvIeL~~~~aP~tv~NFl~L~~G~kG~~Y~gt~FhRVip~f~IQgGd~~~~~g~gg~si  176 (225)
                      .++++++|||||.+++++.|+|+||||.+.||+||+||++||++++|++|+|+.||||+|+|||||||++.++|.|+.++
T Consensus         8 ~p~~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si   87 (185)
T 4fru_A            8 GPKVTVKVYFDLRIGDEDIGRVVIGLFGKTVPKTVDNFVALATGEKGFGYKDSKFHRVIKDFMIQGGDFTRGDGTGGKSI   87 (185)
T ss_dssp             EEEEEEEEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTSCCSTTCBCCEEETTTEEEECCTTTSSSSCCCBT
T ss_pred             CCCcCcEEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHHhcCCCCeEcCCEEEEeeCCCeEEECCCCCCCCCCCccc
Confidence            57889999999999999999999999999999999999999998888449999999999999999999998999999999


Q ss_pred             cCCCCCCCccCccCCCceEEEEecCCCCCCCceEEEEcCCCCcccCCCC
Q 027269          177 YGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKVRWQLCFFC  225 (225)
Q Consensus       177 ~g~~~~dE~~~l~H~~~G~LsMa~~gpns~gSQFfItl~~~p~LDg~~~  225 (225)
                      ||+.|++|++.++|+++|+|||||.+||+++||||||+.++|||||+|.
T Consensus        88 ~g~~f~de~~~~~h~~~G~lsma~~gp~t~~SQFfI~~~~~~~Ld~~~~  136 (185)
T 4fru_A           88 YGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHV  136 (185)
T ss_dssp             TBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSC
T ss_pred             cCCccCccccccCcCCCeEEEEeeCCCCCcceEEEEEeCCCcccCCCcc
Confidence            9999999999999999999999999999999999999999999999874


No 13 
>1qng_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, cyclophilin-cyclosporin complex, immunosuppressant, cyclophilin; HET: BMT; 2.1A {Plasmodium falciparum} SCOP: b.62.1.1 PDB: 1qnh_A*
Probab=100.00  E-value=1.6e-42  Score=289.57  Aligned_cols=125  Identities=60%  Similarity=1.004  Sum_probs=119.3

Q ss_pred             ccceEEEEEEECCeeceeEEEEEcCCCChhhHHHHHHHhhCCCCcc-------cCCCeEEEeecCceeecCccccCCCCC
Q 027269          100 VTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYG-------YKGCSFHRIIKDFMIQGGDFTEGDGTG  172 (225)
Q Consensus       100 ~~~~vf~di~v~~t~~G~IvIeL~~~~aP~tv~NFl~L~~G~kG~~-------Y~gt~FhRVip~f~IQgGd~~~~~g~g  172 (225)
                      .+++|||||.+++++.|+|+||||.+.||+||+||++||+|+ ||+       |+|+.||||+|+|||||||++.++|+|
T Consensus         2 ~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~-g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~g   80 (170)
T 1qng_A            2 KRSKVFFDISIDNSNAGRIIFELFSDITPRTCENFRALCTGE-KIGSRGKNLHYKNSIFHRIIPQFMCQGGDITNGNGSG   80 (170)
T ss_dssp             CSCEEEEEEEESSSEEEEEEEEECTTTCHHHHHHHHHHHHTC-EECTTSSEECCTTCBCCEEETTTEEEECCTTTSSSSC
T ss_pred             CCCEEEEEEeECCEeceeEEEEEcCCCCCHHHHHHHHHhccC-CcCccCccceECCCEEEEEECCCEEEcCCccCCCCCC
Confidence            478999999999999999999999999999999999999865 775       999999999999999999998889999


Q ss_pred             CccccCCCCCCCccCccCCCceEEEEecCCCCCCCceEEEEcCCCCcccCCCC
Q 027269          173 GISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKVRWQLCFFC  225 (225)
Q Consensus       173 g~si~g~~~~dE~~~l~H~~~G~LsMa~~gpns~gSQFfItl~~~p~LDg~~~  225 (225)
                      +.++||+.|++|++.++|+++|+|||||.+||+|+||||||+.++|||||+|.
T Consensus        81 g~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~Ldg~~~  133 (170)
T 1qng_A           81 GESIYGRSFTDENFNMKHDQPGLLSMANAGPNTNSSQFFITLVPCPWLDGKHV  133 (170)
T ss_dssp             CCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSC
T ss_pred             CccccCCcccccccccccCCCCEEEEeecCCCCcccEEEEECCCCcccCCCee
Confidence            99999999999999999999999999999999999999999999999999874


No 14 
>3rdd_A Peptidyl-prolyl CIS-trans isomerase A; beta barrel, cytosolic, inhibito isomerase-isomerase inhibitor complex; HET: EA4; 2.14A {Homo sapiens}
Probab=100.00  E-value=6.9e-42  Score=289.17  Aligned_cols=130  Identities=66%  Similarity=1.138  Sum_probs=122.6

Q ss_pred             hcccccceEEEEEEECCeeceeEEEEEcCCCChhhHHHHHHHhhCCCCcccCCCeEEEeecCceeecCccccCCCCCCcc
Q 027269           96 LQAKVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGIS  175 (225)
Q Consensus        96 ~~~~~~~~vf~di~v~~t~~G~IvIeL~~~~aP~tv~NFl~L~~G~kG~~Y~gt~FhRVip~f~IQgGd~~~~~g~gg~s  175 (225)
                      .++..+++||||+++++++.|+|+||||.+.||+||+||++||++++||+|+|+.||||+|+|||||||++.++|.|+.+
T Consensus        17 ~~~~~~p~v~~di~i~~~~~G~I~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~s   96 (184)
T 3rdd_A           17 FQGMVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKS   96 (184)
T ss_dssp             ----CCCEEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTSCSSTTCBCCEEETTTEEEECCTTTSSSSCCCB
T ss_pred             cccCCCCEEEEEEeECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCcCcccCCCEEEEccCCcEEEeCCCCCCCCCCCcc
Confidence            45667899999999999999999999999999999999999999999999999999999999999999988889999999


Q ss_pred             ccCCCCCCCccCccCCCceEEEEecCCCCCCCceEEEEcCCCCcccCCCC
Q 027269          176 IYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKVRWQLCFFC  225 (225)
Q Consensus       176 i~g~~~~dE~~~l~H~~~G~LsMa~~gpns~gSQFfItl~~~p~LDg~~~  225 (225)
                      +|++.|++|++.++|+++|+|||||.+||+++||||||+.++|||||+|.
T Consensus        97 i~g~~~~de~~~l~h~~~G~lsmA~~gp~s~gSQFfIt~~~~~~LDg~~t  146 (184)
T 3rdd_A           97 IYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHV  146 (184)
T ss_dssp             TTBSCBCCCCCCSCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSC
T ss_pred             cCCCcccCcccccccCCCcEEEEEeCCCCCcccEEEEEeCCchhhCCCce
Confidence            99999999999999999999999999999999999999999999999874


No 15 
>2c3b_A Ppiase, cyclophilin; isomerase, 3D domain swapping, misfolding, Asp F 11, allergen, rotamase; 1.85A {Aspergillus fumigatus} SCOP: b.62.1.1
Probab=100.00  E-value=2.7e-42  Score=288.76  Aligned_cols=125  Identities=59%  Similarity=0.996  Sum_probs=89.0

Q ss_pred             ccceEEEEEEEC--Ceec---eeEEEEEcCCCChhhHHHHHHHhhCCCCcccCCCeEEEeecCceeecCccccCCCCCCc
Q 027269          100 VTTKVFFDVDIG--GKPA---GRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGI  174 (225)
Q Consensus       100 ~~~~vf~di~v~--~t~~---G~IvIeL~~~~aP~tv~NFl~L~~G~kG~~Y~gt~FhRVip~f~IQgGd~~~~~g~gg~  174 (225)
                      +| +|||||.++  ++..   |+|+||||.+.||+||+||++||+|++||+|+|+.||||+|+|||||||+..++|+|+.
T Consensus         2 it-~vf~di~i~~~~~~~T~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgGd~~~~~g~gg~   80 (172)
T 2c3b_A            2 MS-QVFFDVEYAPVGTAETKVGRIVFNLFDKDVPKTAKNFRELCKRPAGEGYRESTFHRIIPNFMIQGGDFTRGNGTGGR   80 (172)
T ss_dssp             CC-CEEEEEEECCTTCSCCEEEEEEEEECTTTSHHHHHHHHHHHHSCTTTSSTTCBCCEEETTTEEEECC----------
T ss_pred             ce-EEEEEEEeCCCCceecccccEEEEEcCCCCcHHHHHHHHHhccCCCcccCCCEEEEEeCCCEEEeCCcCCCCCCCCc
Confidence            46 899999998  6555   99999999999999999999999999999999999999999999999997778999999


Q ss_pred             cccCCCCCCCccCccCCCceEEEEecCCCCCCCceEEEEcCCCCcccCCCC
Q 027269          175 SIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKVRWQLCFFC  225 (225)
Q Consensus       175 si~g~~~~dE~~~l~H~~~G~LsMa~~gpns~gSQFfItl~~~p~LDg~~~  225 (225)
                      ++||+.|++|++.++|+++|+|||||.+||+|+||||||+.++|||||+|.
T Consensus        81 si~g~~f~dE~~~~~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~t  131 (172)
T 2c3b_A           81 SIYGDKFADENFSRKHDKKGILSMANAGPNTNGSQFFITTAVTSWLDGKHV  131 (172)
T ss_dssp             ------------CHHHHHTCEEEEC---------CEEEECSCCTTCCSCCE
T ss_pred             ccCCCcccCcccccccCCCeEEEEeeCCCCCcccEEEEECCCCCccCCCee
Confidence            999999999999999999999999999999999999999999999999873


No 16 
>3k2c_A Peptidyl-prolyl CIS-trans isomerase; ssgcid, NIH, niaid, SBRI, UW, decode, cytoplasm, rotamase, structural genomics; HET: PG5; 1.95A {Encephalitozoon cuniculi}
Probab=100.00  E-value=2.5e-41  Score=287.73  Aligned_cols=127  Identities=56%  Similarity=0.918  Sum_probs=122.0

Q ss_pred             cccceEEEEEEECCeeceeEEEEEcCCCChhhHHHHHHHhhCCCCcccCCCeEEEeecCceeecCccccCCCCCCccccC
Q 027269           99 KVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYG  178 (225)
Q Consensus        99 ~~~~~vf~di~v~~t~~G~IvIeL~~~~aP~tv~NFl~L~~G~kG~~Y~gt~FhRVip~f~IQgGd~~~~~g~gg~si~g  178 (225)
                      ..+++|||||.+++|+.|+|+||||.+.||+||+||++||+|++||+|+|+.||||+|+|||||||+..++|.|+.++||
T Consensus        25 ~~~p~v~~di~i~~t~~G~I~ieL~~~~aP~tv~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g  104 (193)
T 3k2c_A           25 EASGNVYFDVYANEESLGRIVMKLEDDIVPKTAKNFRTLCERPKGEGYKGSTFHRIIPGFMVQGGDYTAHNGTGGRSIYG  104 (193)
T ss_dssp             -CTTCEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHSCTTSSSTTCBEEEEETTTEEEECCTTTSSSSCCCCTTS
T ss_pred             cCCCEEEEEEeECCEEeeEEEEEEcCCCChHHHHHHHHHhccccCCcccCCEEEEEeCCCEEEeCCCCCCCCcCCcccCC
Confidence            45789999999999999999999999999999999999999989999999999999999999999988889999999999


Q ss_pred             CCCCCCccCccCCCceEEEEecCCCCCCCceEEEEcCCCCcccCCCC
Q 027269          179 SSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKVRWQLCFFC  225 (225)
Q Consensus       179 ~~~~dE~~~l~H~~~G~LsMa~~gpns~gSQFfItl~~~p~LDg~~~  225 (225)
                      +.|++|++.++|+++|+|||||.+||+++|||||++.++|||||+|.
T Consensus       105 ~~f~dE~~~l~h~~~G~lsmAn~gp~t~gSQFFIt~~~~~~LDg~~t  151 (193)
T 3k2c_A          105 EKFPDENFELKHTKEGILSMANCGAHTNGSQFFITLGKTQWLDEKHV  151 (193)
T ss_dssp             SCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSC
T ss_pred             CcccccccccccCCCcEEEEEeCCCCCCccEEEEECCCCcccCCCcc
Confidence            99999999999999999999999999999999999999999999874


No 17 
>1mzw_A Cyclophilin H, U-snRNP-ASSOCIATED cyclophilin; cyclophilin, peptidyl-prolyl-CIS/trans isomerase, spliceosome, U4/U6-60K protein, WD protein; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1qoi_A
Probab=100.00  E-value=2.1e-41  Score=284.60  Aligned_cols=127  Identities=61%  Similarity=1.040  Sum_probs=119.3

Q ss_pred             cccceEEEEEEECCeeceeEEEEEcCCCChhhHHHHHHHhhCCCCc-----ccCCCeEEEeecCceeecCccccCCCCCC
Q 027269           99 KVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGY-----GYKGCSFHRIIKDFMIQGGDFTEGDGTGG  173 (225)
Q Consensus        99 ~~~~~vf~di~v~~t~~G~IvIeL~~~~aP~tv~NFl~L~~G~kG~-----~Y~gt~FhRVip~f~IQgGd~~~~~g~gg  173 (225)
                      ..+++||||+.+++|+.|+|+||||.+.||+||+||++||+++.|.     +|+|+.||||+|+|||||||++.++|+|+
T Consensus         8 ~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G~gg   87 (177)
T 1mzw_A            8 PVNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEFRKDGVPIGYKGSTFHRVIKDFMIQGGDFVNGDGTGV   87 (177)
T ss_dssp             CCCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCEETTEECSSTTCBCCEEETTTEEEECCTTTSSSCCC
T ss_pred             CCCCEEEEEEEECCeeceeEEEEEcCCCCcHHHHHHHHHHhcccCCcCccceECCCEEEEEECCCEEEcCCcccCCCCCC
Confidence            3478999999999999999999999999999999999999765531     39999999999999999999988899999


Q ss_pred             ccccCCCCCCCccCccCCCceEEEEecCCCCCCCceEEEEcCCCCcccCCCC
Q 027269          174 ISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKVRWQLCFFC  225 (225)
Q Consensus       174 ~si~g~~~~dE~~~l~H~~~G~LsMa~~gpns~gSQFfItl~~~p~LDg~~~  225 (225)
                      .++||+.|++|++.++|+++|+|||||.+||+|+||||||+.++|||||+|.
T Consensus        88 ~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~  139 (177)
T 1mzw_A           88 ASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHV  139 (177)
T ss_dssp             CCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSC
T ss_pred             CccCCCcccCcccccccCCCCEEEEccCCCCCcceEEEEECCCCCccCCCee
Confidence            9999999999999999999999999999999999999999999999999874


No 18 
>1z81_A Cyclophilin; structural genomics, structural genomics consortium, SGC, isomerase; 2.80A {Plasmodium yoelii yoelii} SCOP: b.62.1.1
Probab=100.00  E-value=1e-40  Score=290.74  Aligned_cols=128  Identities=52%  Similarity=0.910  Sum_probs=120.1

Q ss_pred             ccccceEEEEEEECCeeceeEEEEEcCCCChhhHHHHHHHhhCCCCc-----ccCCCeEEEeecCceeecCccccCCCCC
Q 027269           98 AKVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGY-----GYKGCSFHRIIKDFMIQGGDFTEGDGTG  172 (225)
Q Consensus        98 ~~~~~~vf~di~v~~t~~G~IvIeL~~~~aP~tv~NFl~L~~G~kG~-----~Y~gt~FhRVip~f~IQgGd~~~~~g~g  172 (225)
                      .+.+++||||+.+++++.|+|+||||.+.||+||+||++||++++++     .|+|+.||||+|+|||||||++.++|+|
T Consensus        56 ~~~~~~V~~disi~~t~~G~I~ieL~~d~aP~tv~NF~~L~~~~~g~~g~~~~Y~gt~FHRVi~~FmiQgGD~~~g~G~G  135 (229)
T 1z81_A           56 NPSNPVVFMDINLGNNFLGKFKFELFQNIVPKTSENFRQFCTGEYKVNNLPVGYKNTIFHRVIKEFMIQGGDFINHNGSG  135 (229)
T ss_dssp             STTCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCBSSSSBCSSTTEECCEEETTTEEEECCTTTSSSCC
T ss_pred             CCCCcEEEEEEeECCeecccEEEEEcCCCCCHHHHHHHHHhhCCCCCcCCCceECCCEEEEEeCCCEEEcCCCcCCCCCC
Confidence            34478999999999999999999999999999999999999876542     3999999999999999999998889999


Q ss_pred             CccccCCCCCCCccCccCCCceEEEEecCCCCCCCceEEEEcCCCCcccCCCC
Q 027269          173 GISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKVRWQLCFFC  225 (225)
Q Consensus       173 g~si~g~~~~dE~~~l~H~~~G~LsMa~~gpns~gSQFfItl~~~p~LDg~~~  225 (225)
                      +.++||+.|++|++.++|+++|+|||||.+||+++||||||+.++|||||+|.
T Consensus       136 g~siyg~~f~dE~~~l~h~~~G~LsMAn~gpntngSQFFIt~~~~~~LDg~~t  188 (229)
T 1z81_A          136 SLSIYGEKFDDENFDIKHDKEGLLSMANSGPNTNGCQFFITTKKCEWLDGKNV  188 (229)
T ss_dssp             CCBTTBSCCCCCCCCSCCCSTTEEEECCSSSSCCCSCEEEESSCCGGGBTTBC
T ss_pred             CCccCCCcccccccccccCCCcEEEeccCCCCCcccEEEEECCCCcccCCCee
Confidence            99999999999999999999999999999999999999999999999999874


No 19 
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=100.00  E-value=3e-40  Score=299.77  Aligned_cols=125  Identities=67%  Similarity=1.083  Sum_probs=119.6

Q ss_pred             cceEEEEEEECCeeceeEEEEEcCCCChhhHHHHHHHhhCCCCc--------ccCCCeEEEeecCceeecCccccCCCCC
Q 027269          101 TTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGY--------GYKGCSFHRIIKDFMIQGGDFTEGDGTG  172 (225)
Q Consensus       101 ~~~vf~di~v~~t~~G~IvIeL~~~~aP~tv~NFl~L~~G~kG~--------~Y~gt~FhRVip~f~IQgGd~~~~~g~g  172 (225)
                      +++||||+++++++.|+|+||||.+.||+||+||+.||+|++|+        .|+|+.||||||+|||||||++.++|+|
T Consensus        15 ~~~v~~~~~~~~~~~G~i~~~l~~~~~P~t~~nf~~l~~~~~~~~~~~g~~~~y~~~~fhrv~~~f~~q~Gd~~~~~g~g   94 (370)
T 1ihg_A           15 NPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTG   94 (370)
T ss_dssp             SCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTSSBSCCTTCBEEEEETTTEEEECCTTTSSSSC
T ss_pred             CCeEEEEEEECCEecccEEEEEcCCCCchHHHHHHHHcCCCcCcCccCCCcceeCCcEeEEEECCcEEECCCCCCCCCCC
Confidence            78999999999999999999999999999999999999987653        2999999999999999999999899999


Q ss_pred             CccccCCCCCCCccCccCCCceEEEEecCCCCCCCceEEEEcCCCCcccCCCC
Q 027269          173 GISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKVRWQLCFFC  225 (225)
Q Consensus       173 g~si~g~~~~dE~~~l~H~~~G~LsMa~~gpns~gSQFfItl~~~p~LDg~~~  225 (225)
                      |.+|||..|++|++.++|+++|+|||||.+||+||||||||+.++|||||.|.
T Consensus        95 ~~~~~~~~~~~e~~~~~~~~~g~l~ma~~~~~~~~sqffi~~~~~~~ld~~~~  147 (370)
T 1ihg_A           95 GESIYGEKFEDENFHYKHDKEGLLSMANAGSNTNGSQFFITTVPTPHLDGKHV  147 (370)
T ss_dssp             CCBTTBSCBCCCCCCBCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSC
T ss_pred             CCCCCCCCcCCCcCCcCCCCCeEEEEeeCCCCCCCceEEEeCCCCcccCCCce
Confidence            99999999999999999999999999999999999999999999999999874


No 20 
>2ose_A Probable peptidyl-prolyl CIS-trans isomerase; cyclophilin; 2.04A {Mimivirus}
Probab=100.00  E-value=2.9e-39  Score=282.33  Aligned_cols=126  Identities=25%  Similarity=0.471  Sum_probs=112.1

Q ss_pred             ccccceEEEEEEECCeeceeEEEEEcCCCChhhHHHHHHHhhCC-----------C----C--cccCCCeEEEeecCcee
Q 027269           98 AKVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGE-----------K----G--YGYKGCSFHRIIKDFMI  160 (225)
Q Consensus        98 ~~~~~~vf~di~v~~t~~G~IvIeL~~~~aP~tv~NFl~L~~G~-----------k----G--~~Y~gt~FhRVip~f~I  160 (225)
                      ...+++|||||.+++|+.|+|+||||.+.||+||+||++||+|+           +    |  |+|+|+.||||+|+|||
T Consensus        11 ~~~~p~v~~di~i~~t~~G~I~ieL~~d~aP~tv~NF~~L~~g~~~~~~p~~~~~~~~~~G~~~~Y~gt~FHRVi~~Fmi   90 (234)
T 2ose_A           11 SGKNPRVYMDIVLNNEIIGRLQIKLFRDAFPAGVENFVQLTNGKTYRVNSNGTGKYKYNRHINRTYEGCKFHNVLHNNYI   90 (234)
T ss_dssp             CCSSCEEEEEEEETTEEEEEEEEEECGGGCHHHHHHHHHHHHTCCCC---------------CCCSTTCBCCEEETTTEE
T ss_pred             CCCCCEEEEEEEECCcccceEEEEEcCCCCcHHHHHHHHHhcCCccccccccccccccccCCceEECCcEEEEEECCCEE
Confidence            34578999999999999999999999999999999999999976           4    5  77999999999999999


Q ss_pred             ecCccccCCCCCCccccCCC-----CCCCccCccCCCceEEEEec----CCCCCCCceEEEEcCC------CCcccCCCC
Q 027269          161 QGGDFTEGDGTGGISIYGSS-----FEDESFVLKHVGPGVLSMAN----AGPNTNGSQFFICTVK------VRWQLCFFC  225 (225)
Q Consensus       161 QgGd~~~~~g~gg~si~g~~-----~~dE~~~l~H~~~G~LsMa~----~gpns~gSQFfItl~~------~p~LDg~~~  225 (225)
                      ||||+..++|+||.++||+.     |+  ++.++|+++|+|||||    .+||++|||||||+.+      +|||||+|.
T Consensus        91 QgGd~~~g~G~Gg~siyg~~~~p~~f~--~~~l~h~~~G~lsMAn~~~~~gpntngSQFFIt~~~~~~~~g~p~LDg~~t  168 (234)
T 2ose_A           91 VSGDIYNSNGSSAGTVYCDEPIPPVFG--DYFYPHESKGLLSLVPYTDESGNRYYDSTFMITLDDIRPSNVLDELDRDQV  168 (234)
T ss_dssp             EECCCC----CCCCCTTTTCCBCCCCC--SCCCCSCSTTEEEECCEECTTSCEEBCSCEEEESSCCCTTSSGGGSCTTSE
T ss_pred             EcCCccCCCCCCCccccCCccCccccc--CcCccCCCCCEEEEecccccCCCCCccceEEEEecCccccCCCcccCCCee
Confidence            99998778999999999987     66  4689999999999999    8999999999999999      999999873


No 21 
>2fu0_A Cyclophilin, putative; PFE0505W, cyclosporin-binding domain, structura genomics, structural genomics consortium, SGC, unknown FUNC; 1.80A {Plasmodium falciparum} SCOP: b.62.1.1
Probab=100.00  E-value=5.1e-38  Score=260.17  Aligned_cols=110  Identities=52%  Similarity=0.824  Sum_probs=104.4

Q ss_pred             CeeceeEEEEEcCCCChhhHHHHHHHhhCCCCcccCCCeEEEeecCceeecCccccCCCCCCccccCCCCCCCcc-CccC
Q 027269          112 GKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGSSFEDESF-VLKH  190 (225)
Q Consensus       112 ~t~~G~IvIeL~~~~aP~tv~NFl~L~~G~kG~~Y~gt~FhRVip~f~IQgGd~~~~~g~gg~si~g~~~~dE~~-~l~H  190 (225)
                      .|+.|+|+||||.+.||+||+||++||  ++|| |+|+.||||+|+|||||||+. ++|.|+.++||+.|++|+. .++|
T Consensus        11 ~T~~G~i~ieL~~~~aP~t~~NF~~L~--~~g~-Y~g~~fhRvi~~f~iQgGd~~-~~g~gg~si~g~~~~dE~~~~l~h   86 (160)
T 2fu0_A           11 YTTMGDIHISLFYKECKKTVQNFSVHS--INGY-YNNCIFHRVIKHFMVQTGDPS-GDGTGGESIWGNEFEDEFFDHLNH   86 (160)
T ss_dssp             EETTEEEEEEECTTTCHHHHHHHHHHH--HTTT-TTTCBCCEEETTTEEEECCTT-SSSSCCCCTTSSCBCCCCBTTBCS
T ss_pred             EecCccEEEEEeCCCChHHHHHHHHHh--ccCc-cCCCEEEEEECCCEEEeCCcC-CCCCCCCcccCCCccccccCCccc
Confidence            368999999999999999999999999  5789 999999999999999999986 7899999999999999987 6899


Q ss_pred             CCceEEEEecCCCCCCCceEEEEcCCCCcccCCCC
Q 027269          191 VGPGVLSMANAGPNTNGSQFFICTVKVRWQLCFFC  225 (225)
Q Consensus       191 ~~~G~LsMa~~gpns~gSQFfItl~~~p~LDg~~~  225 (225)
                      +++|+|||||.+||+++|||||++.++|||||+|.
T Consensus        87 ~~~G~lsmA~~gp~s~~SQFfI~~~~~~~Ldg~~t  121 (160)
T 2fu0_A           87 SKPFMVSMANCGPNTNGSQFFITTVPCPWLDFKHT  121 (160)
T ss_dssp             SSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSC
T ss_pred             CCceEEEEecCCCCCcccEEEEECCCCCccCCCcE
Confidence            99999999999999999999999999999999874


No 22 
>2x7k_A Peptidyl-prolyl CIS-trans isomerase-like 1; isomerase-immunosuppressant complex, immunosuppressant; HET: MLE MVA BMT ABA SAR; 1.15A {Homo sapiens} PDB: 1xwn_A
Probab=100.00  E-value=6.2e-38  Score=261.01  Aligned_cols=116  Identities=53%  Similarity=0.898  Sum_probs=108.2

Q ss_pred             cceEEEEEEECCeeceeEEEEEcCCCChhhHHHHHHHhhCCCCcccCCCeEEEeecCceeecCccccCCCCCCccccCCC
Q 027269          101 TTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGSS  180 (225)
Q Consensus       101 ~~~vf~di~v~~t~~G~IvIeL~~~~aP~tv~NFl~L~~G~kG~~Y~gt~FhRVip~f~IQgGd~~~~~g~gg~si~g~~  180 (225)
                      +..|.|+     |+.|+|+||||.+.||+||+||++||  ++|| |+|+.||||+|+|||||||+. ++|.|+.++||+.
T Consensus        11 ~~~v~l~-----t~~G~i~ieL~~~~aP~t~~NF~~L~--~~g~-Y~g~~fhRvi~~f~iQgGd~~-~~g~gg~si~g~~   81 (166)
T 2x7k_A           11 PPNVYLE-----TSMGIIVLELYWKHAPKTCKNFAELA--RRGY-YNGTKFHRIIKDFMIQGGDPT-GTGRGGASIYGKQ   81 (166)
T ss_dssp             CSEEEEE-----ETTEEEEEEECTTTCHHHHHHHHHHH--HHTT-TTTEECCEEETTTEEEECCTT-SSSSCCCCTTSSC
T ss_pred             CCEEEEE-----eCCCcEEEEEccCCCCHHHHHHHHHH--hcCC-CCCCEEEEEECCCEEEcCCCC-CCCCCCCccCCCc
Confidence            4567766     48899999999999999999999999  5789 999999999999999999987 7899999999999


Q ss_pred             CCCCc-cCccCCCceEEEEecCCCCCCCceEEEEcCCCCcccCCCC
Q 027269          181 FEDES-FVLKHVGPGVLSMANAGPNTNGSQFFICTVKVRWQLCFFC  225 (225)
Q Consensus       181 ~~dE~-~~l~H~~~G~LsMa~~gpns~gSQFfItl~~~p~LDg~~~  225 (225)
                      |++|+ ..++|+++|+|||||.+||+++|||||++.++|||||+|.
T Consensus        82 ~~dE~~~~l~h~~~G~lsmAn~gp~s~gSQFfI~~~~~~~Ldg~~t  127 (166)
T 2x7k_A           82 FEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHT  127 (166)
T ss_dssp             BCCCCCTTSCCCSTTEEEECBSSTTCBCSCEEEESSCCGGGTTTSC
T ss_pred             cccccccccCCCCCeEEEEeeCCCCCccceEEEECCCCCccCCCee
Confidence            99998 5899999999999999999999999999999999999874


No 23 
>2ok3_A Peptidyl-prolyl CIS-trans isomerase-like 3; beta-barrel, helix, disulfide bridge; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1xyh_A 2oju_A*
Probab=100.00  E-value=6.3e-38  Score=259.61  Aligned_cols=109  Identities=54%  Similarity=0.826  Sum_probs=103.9

Q ss_pred             eeceeEEEEEcCCCChhhHHHHHHHhhCCCCcccCCCeEEEeecCceeecCccccCCCCCCccccCCCCCCCcc-CccCC
Q 027269          113 KPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGSSFEDESF-VLKHV  191 (225)
Q Consensus       113 t~~G~IvIeL~~~~aP~tv~NFl~L~~G~kG~~Y~gt~FhRVip~f~IQgGd~~~~~g~gg~si~g~~~~dE~~-~l~H~  191 (225)
                      |+.|+|+||||.++||+||+||++||  +.|| |+|+.||||+|+|||||||+. ++|.|+.++||..|++|.. .++|+
T Consensus         7 T~~G~i~ieL~~~~aP~t~~NF~~L~--~~g~-Y~g~~fhRvi~~f~iQgGd~~-~~g~gg~si~g~~~~dE~~~~l~h~   82 (161)
T 2ok3_A            7 TDVGDIKIEVFCERTPKTCENFLALC--ASNY-YNGCIFHRNIKGFMVQTGDPT-GTGRGGNSIWGKKFEDEYSEYLKHN   82 (161)
T ss_dssp             ETTEEEEEEECTTTCHHHHHHHHHHH--HTTT-TTTCBCCEEETTTEEEECCTT-SSSSCCCCTTSSCBCCCCCTTCCSC
T ss_pred             eCCccEEEEEcCCCCcHHHHHHHHHh--hhcc-cCCCEEEEEECCCEEecCCCC-CCCCCCCcccCCccccccCcCcCcC
Confidence            79999999999999999999999999  5789 999999999999999999988 7899999999999999975 78999


Q ss_pred             CceEEEEecCCCCCCCceEEEEcCCCCcccCCCC
Q 027269          192 GPGVLSMANAGPNTNGSQFFICTVKVRWQLCFFC  225 (225)
Q Consensus       192 ~~G~LsMa~~gpns~gSQFfItl~~~p~LDg~~~  225 (225)
                      ++|+|||||.+||+++|||||++.++|||||+|.
T Consensus        83 ~~G~lsma~~gp~s~~SQFfI~~~~~~~Ldg~~t  116 (161)
T 2ok3_A           83 VRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYT  116 (161)
T ss_dssp             STTEEEECCSSTTCBCSCEEEESSCCGGGTTTSC
T ss_pred             CCeEEEEecCCCCCcceEEEEEcCCCCccCCCEe
Confidence            9999999999999999999999999999999874


No 24 
>2hq6_A Serologically defined colon cancer antigen 10; protein folding, peptidyl-prolyl CIS-trans isomerase, struct genomics; 1.75A {Homo sapiens}
Probab=100.00  E-value=1e-37  Score=264.01  Aligned_cols=122  Identities=39%  Similarity=0.652  Sum_probs=112.7

Q ss_pred             hhcccccceEEEEEEECCeeceeEEEEEcCCCChhhHHHHHHHhhCCCCcccCCCeEEEeecCceeecCccccCCCCCCc
Q 027269           95 ELQAKVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGI  174 (225)
Q Consensus        95 ~~~~~~~~~vf~di~v~~t~~G~IvIeL~~~~aP~tv~NFl~L~~G~kG~~Y~gt~FhRVip~f~IQgGd~~~~~g~gg~  174 (225)
                      ..+++.+.+|+|++     +.|+|+||||.++||+||+||++||  ++|| |+|+.||||+|+|||||||+. ++|.||.
T Consensus        18 ~~~~~~~~~V~l~T-----~~G~I~ieL~~~~aP~tv~NF~~L~--~~g~-Y~g~~FhRvi~~f~iQgGd~~-~~g~gg~   88 (185)
T 2hq6_A           18 GSEPPTNGKVLLKT-----TAGDIDIELWSKEAPKACRNFIQLC--LEAY-YDNTIFHRVVPGFIVQGGDPT-GTGSGGE   88 (185)
T ss_dssp             TCCCCCBCEEEEEE-----TTEEEEEEEBTTTCHHHHHHHHHHH--HTTT-TTTEECCEEETTTEEEECCTT-SSSSCCC
T ss_pred             ccCCCCCCEEEEEe-----CCccEEEEEeCCCCcHHHHHHHHHh--hcCc-cCCCEEEEEECCCEEEcCCCC-CCCCCCC
Confidence            34566678898885     7899999999999999999999999  5789 999999999999999999987 7899999


Q ss_pred             cccCCCCCCCcc-CccCCCceEEEEecCCCCCCCceEEEEcCCCCcccCCCC
Q 027269          175 SIYGSSFEDESF-VLKHVGPGVLSMANAGPNTNGSQFFICTVKVRWQLCFFC  225 (225)
Q Consensus       175 si~g~~~~dE~~-~l~H~~~G~LsMa~~gpns~gSQFfItl~~~p~LDg~~~  225 (225)
                      ++||+.|++|.. .++|+++|+|||||.+||+++|||||++.++|||||+|.
T Consensus        89 si~g~~~~dE~~~~l~h~~~G~lsMA~~g~~s~gSQFFIt~~~~~~LDg~~t  140 (185)
T 2hq6_A           89 SIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHT  140 (185)
T ss_dssp             CTTSSCBCCCCBTTBCSCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSC
T ss_pred             cccCCccccccccCcccCCCeEEEEccCCCCCccceEEEECCCCCccCCCce
Confidence            999999999985 688999999999999999999999999999999999874


No 25 
>2poe_A Cyclophilin-like protein, putative; cryptosporidium parvum cyclophilin isomerase, structural genomics; 2.01A {Cryptosporidium parvum iowa II} PDB: 2qer_A
Probab=100.00  E-value=5.1e-38  Score=265.76  Aligned_cols=116  Identities=48%  Similarity=0.703  Sum_probs=108.0

Q ss_pred             EEEEEECCeeceeEEEEEcCCCChhhHHHHHHHhhCCCCcccCCCeEEEeecCceeecCccccCCCCCCccccCCCCCCC
Q 027269          105 FFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGSSFEDE  184 (225)
Q Consensus       105 f~di~v~~t~~G~IvIeL~~~~aP~tv~NFl~L~~G~kG~~Y~gt~FhRVip~f~IQgGd~~~~~g~gg~si~g~~~~dE  184 (225)
                      ++++.+. |+.|+|+||||.+.||+||+||++||  ++|| |+|+.||||+|+|||||||+. ++|.||.++||+.|++|
T Consensus        16 ~~~v~i~-t~~G~i~ieL~~~~aP~t~~NF~~L~--~~g~-Y~g~~FhRvi~~f~iQgGd~~-~~g~gg~si~g~~~~dE   90 (185)
T 2poe_A           16 FQGVRII-TNYGDLKFELFCSQCPKACKNFLALS--ASGY-YKNTIFHKNIKGFIIQGGDPT-GTGKGGESIYGRYFDDE   90 (185)
T ss_dssp             CCEEEEE-ETTEEEEEEECTTTCHHHHHHHHHHH--HTTT-TTTEEEEEECTTSEEEEEETT-SSSSCCCBTTBSCBCCC
T ss_pred             ceEEEEE-ecCccEEEEEeCCCCcHHHHHHHHHh--ccCC-CCCCEEEEEECCCEEEcCCCC-CCCCCCCccCCCccccc
Confidence            4455554 79999999999999999999999999  5789 999999999999999999987 88999999999999999


Q ss_pred             c-cCccCCCceEEEEecCC----CCCCCceEEEEcCCCCcccCCCC
Q 027269          185 S-FVLKHVGPGVLSMANAG----PNTNGSQFFICTVKVRWQLCFFC  225 (225)
Q Consensus       185 ~-~~l~H~~~G~LsMa~~g----pns~gSQFfItl~~~p~LDg~~~  225 (225)
                      + ..++|+++|+|||||.+    ||+++||||||+.++|||||+|.
T Consensus        91 ~~~~l~h~~~G~lsmA~~g~~~~p~s~gSQFFIt~~~~~~LDg~~t  136 (185)
T 2poe_A           91 IYPELKYDRRGILSMASKGASKKPNTNGSQFFITYSSLPQLNGEYV  136 (185)
T ss_dssp             CCTTSCCCSTTEEEECCSCC-CCCSCBCSCEEEESSCCGGGTTTSC
T ss_pred             ccCCCccCCCeEEEEecCCCCCCCCCccceEEEECCCCCccCCCee
Confidence            7 78999999999999999    99999999999999999999874


No 26 
>2a2n_A Peptidylprolyl isomerase domain and WD repeat CON; CIS-trans isomerization, protein-folding, peptidylprolyl ISO structural genomics; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00  E-value=5.3e-38  Score=263.82  Aligned_cols=110  Identities=54%  Similarity=0.786  Sum_probs=104.7

Q ss_pred             CeeceeEEEEEcCCCChhhHHHHHHHhhCCCCcccCCCeEEEeecCceeecCccccCCCCCCccccCCCCCCCcc-CccC
Q 027269          112 GKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGSSFEDESF-VLKH  190 (225)
Q Consensus       112 ~t~~G~IvIeL~~~~aP~tv~NFl~L~~G~kG~~Y~gt~FhRVip~f~IQgGd~~~~~g~gg~si~g~~~~dE~~-~l~H  190 (225)
                      .|+.|+|+||||.+.||+||+||++||  ++|| |+|+.||||+|+|||||||+. ++|.|+.++||+.|++|+. .++|
T Consensus        27 ~t~~G~i~ieL~~~~aP~t~~NF~~L~--~~g~-Y~g~~FhRvi~~f~iQgGd~~-~~g~gg~si~g~~~~dE~~~~l~h  102 (176)
T 2a2n_A           27 HTSMGDIHTKLFPVECPKTVENFCVHS--RNGY-YNGHTFHRIIKGFMIQTGDPT-GTGMGGESIWGGEFEDEFHSTLRH  102 (176)
T ss_dssp             EETTEEEEEEECTTTCHHHHHHHHHHH--HTTT-TTTCBCCEEETTTEEEECCTT-SSSSCCCCTTSSCBCCCCCTTCCS
T ss_pred             EecCccEEEEEeCCCChHHHHHHHHHh--hcCc-cCCCEEEEEECCcEEEccCCC-CCCCCCCcccCCcccccccccccc
Confidence            479999999999999999999999999  5789 999999999999999999986 7899999999999999987 6999


Q ss_pred             CCceEEEEecCCCCCCCceEEEEcCCCCcccCCCC
Q 027269          191 VGPGVLSMANAGPNTNGSQFFICTVKVRWQLCFFC  225 (225)
Q Consensus       191 ~~~G~LsMa~~gpns~gSQFfItl~~~p~LDg~~~  225 (225)
                      +++|+|||||.+||+++|||||++.++|||||+|.
T Consensus       103 ~~~G~lsmA~~gp~s~gSQFFIt~~~~~~LDg~~t  137 (176)
T 2a2n_A          103 DRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHT  137 (176)
T ss_dssp             CSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSC
T ss_pred             CCceEEEEEeCCCCCcccEEEEECCCCCccCCCee
Confidence            99999999999999999999999999999999874


No 27 
>1w74_A Peptidyl-prolyl CIS-trans isomerase A; cyclophilin, ppiase, RV0009, rotamase, structural proteomics in europe, spine; 2.6A {Mycobacterium tuberculosis} SCOP: b.62.1.1
Probab=100.00  E-value=6.3e-37  Score=260.36  Aligned_cols=115  Identities=47%  Similarity=0.716  Sum_probs=103.3

Q ss_pred             cceEEEEEEECCeeceeEEEEEcCCCChhhHHHHHHHhhCCC-------------CcccCCCeEEEeecCceeecCcccc
Q 027269          101 TTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEK-------------GYGYKGCSFHRIIKDFMIQGGDFTE  167 (225)
Q Consensus       101 ~~~vf~di~v~~t~~G~IvIeL~~~~aP~tv~NFl~L~~G~k-------------G~~Y~gt~FhRVip~f~IQgGd~~~  167 (225)
                      +..|.|+     |+.|+|+||||.+.||+||+||++||+|++             +| |+|+.||||+|+|||||||+. 
T Consensus        23 ~~~v~l~-----t~~G~I~ieL~~~~aP~tv~NF~~L~tG~~~~~~~~~g~~~~~~~-Y~g~~FhRVi~~fmiQgGd~~-   95 (191)
T 1w74_A           23 TATATLH-----TNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPF-YDGAVFHRVIQGFMIQGGDPT-   95 (191)
T ss_dssp             SEEEEEE-----ETTEEEEEEECTTTSHHHHHHHHHHHHTCSCCSSCCTTBSSSSCS-STTEEEEEEETTTEEEECCTT-
T ss_pred             CeEEEEE-----ecceeEEEEEcCCCChHHHHHHHHHhcCCcccccccccccccCCc-cCCCEEEEEeCCCEEecCCCC-
Confidence            4455544     689999999999999999999999998754             56 999999999999999999986 


Q ss_pred             CCCCCCccccCCCCCCC-ccCccCCCceEEEEecCCCCCCCceEEEEcCCCCcccCCCC
Q 027269          168 GDGTGGISIYGSSFEDE-SFVLKHVGPGVLSMANAGPNTNGSQFFICTVKVRWQLCFFC  225 (225)
Q Consensus       168 ~~g~gg~si~g~~~~dE-~~~l~H~~~G~LsMa~~gpns~gSQFfItl~~~p~LDg~~~  225 (225)
                      ++|+|+   ||+.|++| ++.++|+++|+|||||.+||+|+||||||+.++|||||+|.
T Consensus        96 g~G~gg---~g~~f~dE~~~~l~h~~~G~lsMAn~gpntngSQFFIt~~~~~~LDg~~t  151 (191)
T 1w74_A           96 GTGRGG---PGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTPHLNRRHT  151 (191)
T ss_dssp             SSSSCC---SSCCBCCCCCTTCCSCSSSEEEECCSSTTCBSSCEEEESSCCGGGTTTSC
T ss_pred             CCCCCC---CCCccccccccCCCcCCCcEEEEeeCCCCCccceEEEEcCCCcccCCCee
Confidence            778777   58889999 47899999999999999999999999999999999999874


No 28 
>1zkc_A Peptidyl-prolyl CIS-trans isomerase like 2; CIS-trans isomerization, peptidylprolyl isomerase, protein- folding, structural genomics consortium; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00  E-value=4.7e-37  Score=262.35  Aligned_cols=109  Identities=50%  Similarity=0.799  Sum_probs=104.0

Q ss_pred             eeceeEEEEEcCCCChhhHHHHHHHhhCCCCcccCCCeEEEeecCceeecCccccCCCCCCccccCCCCCCC-ccCccCC
Q 027269          113 KPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGSSFEDE-SFVLKHV  191 (225)
Q Consensus       113 t~~G~IvIeL~~~~aP~tv~NFl~L~~G~kG~~Y~gt~FhRVip~f~IQgGd~~~~~g~gg~si~g~~~~dE-~~~l~H~  191 (225)
                      |+.|+|+||||.+.||+||+||++||  ++|| |+|+.||||+|+|||||||+. ++|.|+.++||..|++| +..++|+
T Consensus        26 T~~G~I~ieL~~~~aP~tv~NF~~L~--~~g~-Ydg~~FhRVi~~f~iQgGd~~-~~g~Gg~si~g~~f~dE~~~~l~h~  101 (197)
T 1zkc_A           26 TNKGDLNLELHCDLTPKTCENFIRLC--KKHY-YDGTIFHRSIRNFVIQGGDPT-GTGTGGESYWGKPFKDEFRPNLSHT  101 (197)
T ss_dssp             ETTEEEEEEECTTTSHHHHHHHHHHH--HTTT-TTTEEEEEEETTTEEEECCTT-SSSSCCCBTTBSCBCCCCCTTCCSC
T ss_pred             eCCccEEEEEcCCCCcHHHHHHHHHH--hcCC-CCCCEEEEEeCCCEEEcCCCC-CCCCCCCccCCCccccccCcCcCCC
Confidence            58999999999999999999999999  5899 999999999999999999987 78999999999999999 4788999


Q ss_pred             CceEEEEecCCCCCCCceEEEEcCCCCcccCCCC
Q 027269          192 GPGVLSMANAGPNTNGSQFFICTVKVRWQLCFFC  225 (225)
Q Consensus       192 ~~G~LsMa~~gpns~gSQFfItl~~~p~LDg~~~  225 (225)
                      ++|+|||||.+||+++||||||+.++|||||+|.
T Consensus       102 ~~G~lsMAn~gp~sngSQFFIt~~~~~~LDg~~t  135 (197)
T 1zkc_A          102 GRGILSMANSGPNSNRSQFFITFRSCAYLDKKHT  135 (197)
T ss_dssp             STTEEEECCSSTTCBCSCEEEESSCCGGGTTTSC
T ss_pred             CceEEEEecCCCCCcccEEEEEcCCCCccCCCcc
Confidence            9999999999999999999999999999999874


No 29 
>2b71_A Cyclophilin-like protein; structural genomics, structural genomics consortium, SGC, isomerase; 2.50A {Plasmodium yoelii} SCOP: b.62.1.1
Probab=100.00  E-value=5.1e-37  Score=261.90  Aligned_cols=117  Identities=46%  Similarity=0.701  Sum_probs=108.8

Q ss_pred             ccceEEEEEEECCeeceeEEEEEcCCCChhhHHHHHHHhhCCCCcccCCCeEEEeecCceeecCccccCCCCCCccccCC
Q 027269          100 VTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGS  179 (225)
Q Consensus       100 ~~~~vf~di~v~~t~~G~IvIeL~~~~aP~tv~NFl~L~~G~kG~~Y~gt~FhRVip~f~IQgGd~~~~~g~gg~si~g~  179 (225)
                      .+..|.|+     |+.|+|+||||.+.||+||+||++||  ++|| |+|+.||||+|+|||||||+. ++|.||.++||.
T Consensus        37 ~~~~V~l~-----T~~G~I~ieL~~~~aP~tv~NF~~L~--~~g~-Y~g~~FhRVi~~f~iQgGd~~-~~g~gg~si~g~  107 (196)
T 2b71_A           37 ERGYITIY-----TNLGDFEVELYWYHSPKTCLNFYTLC--EMGF-YDNTIFHRVIPNFVIQGGDPT-GTGKGGKSIYGE  107 (196)
T ss_dssp             HSCEEEEE-----ETTEEEEEEECTTTSHHHHHHHHHHH--HTTT-TTTEEEEEEETTTEEEEEETT-SSSSCCCBTTBS
T ss_pred             CCcEEEEE-----eCCCCEEEEEeCCCCcHHHHHHHHHh--hcCC-cCCCEEEEEeCCcEEEcCCCC-CCCCCCCccCCC
Confidence            35677776     58999999999999999999999999  5899 999999999999999999997 789999999999


Q ss_pred             CCCCCc-cCccCCCceEEEEecCCCCCCCceEEEEcCCCCcccCCCC
Q 027269          180 SFEDES-FVLKHVGPGVLSMANAGPNTNGSQFFICTVKVRWQLCFFC  225 (225)
Q Consensus       180 ~~~dE~-~~l~H~~~G~LsMa~~gpns~gSQFfItl~~~p~LDg~~~  225 (225)
                      .|++|. ..++|+++|+|||||.+||+++||||||+.++|||||+|.
T Consensus       108 ~~~dE~~~~l~h~~~G~lsMAn~gpns~gSQFFIt~~~~~~LDg~~t  154 (196)
T 2b71_A          108 YFEDEINKELKHTGAGILSMSNNGPNTNSSQFFITLAPLPHLDGKHT  154 (196)
T ss_dssp             CBCCCCCTTCCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSC
T ss_pred             cccccccCCcCcCCCeEEEEccCCCCCcccEEEEECCCCCccCCCEe
Confidence            999995 5789999999999999999999999999999999999874


No 30 
>2k7n_A Peptidyl-prolyl CIS-trans isomerase-like 1; beta barrel, disorder-order transition, HOOK-like, mRNA processing, mRNA splicing, rotamase; NMR {Homo sapiens}
Probab=100.00  E-value=1.3e-36  Score=260.72  Aligned_cols=116  Identities=53%  Similarity=0.898  Sum_probs=108.2

Q ss_pred             cceEEEEEEECCeeceeEEEEEcCCCChhhHHHHHHHhhCCCCcccCCCeEEEeecCceeecCccccCCCCCCccccCCC
Q 027269          101 TTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGSS  180 (225)
Q Consensus       101 ~~~vf~di~v~~t~~G~IvIeL~~~~aP~tv~NFl~L~~G~kG~~Y~gt~FhRVip~f~IQgGd~~~~~g~gg~si~g~~  180 (225)
                      +..|.|+     |++|+|+||||.++||+||+||++||  ++|| |+|+.||||+|+|||||||+. ++|.++.++|++.
T Consensus        11 ~~~V~l~-----T~~G~I~ieL~~d~aP~tv~NF~~L~--~~g~-Ydg~~FhRVi~~F~iQgGd~~-~~g~gg~si~g~~   81 (203)
T 2k7n_A           11 PPNVYLE-----TSMGIIVLELYWKHAPKTCKNFAELA--RRGY-YNGTKFHRIIKDFMIQGGDPT-GTGRGGASIYGKQ   81 (203)
T ss_dssp             CSEEEEE-----ESSCEEEEEECTTTCTTHHHHHHHHH--HHTC-GGGCEEEEEETTTEEEEECSS-SSSSCCCTTSCSC
T ss_pred             CCEEEEE-----eCCCcEEEEEccCCCcHHHHHHHHHH--hcCc-cCCCEEEEEeCCcEEEcCCCC-CCCCCCCccCCCc
Confidence            4567776     48899999999999999999999999  5789 999999999999999999987 7889999999999


Q ss_pred             CCCCc-cCccCCCceEEEEecCCCCCCCceEEEEcCCCCcccCCCC
Q 027269          181 FEDES-FVLKHVGPGVLSMANAGPNTNGSQFFICTVKVRWQLCFFC  225 (225)
Q Consensus       181 ~~dE~-~~l~H~~~G~LsMa~~gpns~gSQFfItl~~~p~LDg~~~  225 (225)
                      |++|+ ..++|+++|+|||||.+||+++||||||+.++||||++|.
T Consensus        82 f~dE~~~~l~h~~~G~lsMAn~gpnsngSQFFIt~~~~~~LDg~~t  127 (203)
T 2k7n_A           82 FEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHT  127 (203)
T ss_dssp             BCCCCCCSSCCCSSCEEEEEESSTTCEEEEEEEESSCCCSSTTTSC
T ss_pred             ccccccccccCCCCeEEEEeeCCCCCcccEEEEEcCCCCccCCCee
Confidence            99998 5899999999999999999999999999999999999874


No 31 
>3bkp_A Cyclophilin; malaria, isomerase, structural GENO structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00  E-value=2.4e-36  Score=263.60  Aligned_cols=123  Identities=36%  Similarity=0.620  Sum_probs=111.0

Q ss_pred             hhhcccccceEEEEEEECCeeceeEEEEEcCCCChhhHHHHHHHhhCCCCcccCCCeEEEeecCceeecCccccCCCCCC
Q 027269           94 VELQAKVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGG  173 (225)
Q Consensus        94 ~~~~~~~~~~vf~di~v~~t~~G~IvIeL~~~~aP~tv~NFl~L~~G~kG~~Y~gt~FhRVip~f~IQgGd~~~~~g~gg  173 (225)
                      ...++..+..|+|+.     ++|+|+||||.+.||+||+||++||  +.|| |+|+.||||+|+|||||||+. ++|+||
T Consensus        14 ~~~~p~~~~~V~l~T-----~~G~I~ieL~~d~aP~tv~NF~~L~--~~g~-Ydgt~FhRVi~~FmiQgGdp~-~~G~Gg   84 (232)
T 3bkp_A           14 LYFQGSTRGKVVLHT-----SLGDLDVELWARECPLACRNFVQLC--LEGY-YVNTIFHRVVKDFIVQGGDPT-GTGRGG   84 (232)
T ss_dssp             GGCCCSCBCEEEEEE-----TTEEEEEEEBTTTCHHHHHHHHHHH--HHTT-TTTCBEEEEETTTEEEECCTT-SSSSCC
T ss_pred             ccccCCCCCEEEEEE-----CCCcEEEEEcCCCCcHHHHHHHHHh--hcCc-cCCCEEEEEeCCCEEEcCCCC-CCCCCC
Confidence            345566788888874     7899999999999999999999999  5789 999999999999999999998 789999


Q ss_pred             cccc--CCCCCCCcc-CccCCCceEEEEecCCC--------------CCCCceEEEEcCCCCcccCCCC
Q 027269          174 ISIY--GSSFEDESF-VLKHVGPGVLSMANAGP--------------NTNGSQFFICTVKVRWQLCFFC  225 (225)
Q Consensus       174 ~si~--g~~~~dE~~-~l~H~~~G~LsMa~~gp--------------ns~gSQFfItl~~~p~LDg~~~  225 (225)
                      .++|  |+.|++|.. .++|+++|+|||||.++              |+++||||||+.++|||||+|.
T Consensus        85 ~si~~~g~~f~dE~~~~l~h~~~G~lsMA~~g~~~~~~~n~e~g~~~~sngSQFFIt~~~~p~LDg~~t  153 (232)
T 3bkp_A           85 ADTTFDGKPFDVETHPRLKFRYRGLVGVANLGRSSKDAENDERGRSLGTNGNQFFITLARADVLNNAYT  153 (232)
T ss_dssp             CCCTTTTCCBCCCCCTTCCCCSTTEEEECCCC----------------CBCSCEEEESSCCGGGTTTSC
T ss_pred             CccccCCCccCCccccCcCcCCCeEEEEeccCCcccccccccccccCCCcCCEEEEECCCCcccCCCcc
Confidence            9999  999999975 78899999999999997              6999999999999999999874


No 32 
>3bo7_A Peptidyl-prolyl CIS-trans isomerase cyclophilin-T; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, structural G structural genomics consortium, SGC; HET: BMT; 2.35A {Toxoplasma gondii}
Probab=100.00  E-value=3e-36  Score=257.75  Aligned_cols=109  Identities=37%  Similarity=0.548  Sum_probs=97.4

Q ss_pred             eeceeEEEEEcCCCChhhHHHHHHHhhCCCCcccCCCeEEEeecCceeecC-----ccccCCCCCCcccc-------CCC
Q 027269          113 KPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGG-----DFTEGDGTGGISIY-------GSS  180 (225)
Q Consensus       113 t~~G~IvIeL~~~~aP~tv~NFl~L~~G~kG~~Y~gt~FhRVip~f~IQgG-----d~~~~~g~gg~si~-------g~~  180 (225)
                      |+.|+|+||||++.||+||+||++||  +.|| |+|+.||||+|+||||||     |++ ++|.||.++|       |..
T Consensus        13 T~~G~i~ieL~~~~aP~t~~NF~~L~--~~g~-Ydg~~FhRvi~~f~iQgG~~~~~Dp~-~~g~gg~si~~~~~~~~g~~   88 (201)
T 3bo7_A           13 TTQGSLNIELHADMAPRACDSFLRLC--AVKY-FDDTIFHRCIRNFMIQGGRAELRQPS-KKKEVQQSPRSISGFPGGAP   88 (201)
T ss_dssp             ETTEEEEEEECTTTCHHHHHHHHHHH--HTTT-TTTCBEEEEETTTEEEECCGGGCCC--------CCSSCCCSSTTCCC
T ss_pred             eCCCCEEEEEcCCCCcHHHHHHHHHH--hcCc-cCCCEEEEeeCCCEEEcCcccccCCC-CCCCCCccccccccccCCCc
Confidence            68999999999999999999999999  5899 999999999999999999     987 7899999999       899


Q ss_pred             CCCCc-cCccCCCceEEEEecCCCCCCCceEEEEcCCCCcccCCCC
Q 027269          181 FEDES-FVLKHVGPGVLSMANAGPNTNGSQFFICTVKVRWQLCFFC  225 (225)
Q Consensus       181 ~~dE~-~~l~H~~~G~LsMa~~gpns~gSQFfItl~~~p~LDg~~~  225 (225)
                      |++|. ..++|+++|+|||||.+||+++||||||+.++|||||+|.
T Consensus        89 f~dE~~~~l~h~~~G~lsmA~~gp~s~gSQFFIt~~~~~~LDg~~t  134 (201)
T 3bo7_A           89 FEDEFDNRLVHQGIGVLSMANDGKHSNLSEFFITFKSCEHLNNKHT  134 (201)
T ss_dssp             BCCCCCTTCCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSC
T ss_pred             ccCcccCCCCcCCCcEEEEeeCCCCCcccEEEEECCCCcccCCCce
Confidence            99994 7889999999999999999999999999999999999874


No 33 
>1v9t_A Cyclophilin B; beta barrel, isomerase-isomerase inhibitor complex; HET: NIT; 1.70A {Escherichia coli} SCOP: b.62.1.1 PDB: 1j2a_A* 1vai_A* 1clh_A
Probab=100.00  E-value=3.4e-35  Score=244.15  Aligned_cols=113  Identities=28%  Similarity=0.406  Sum_probs=99.6

Q ss_pred             ccceEEEEEEECCeeceeEEEEEcCCCChhhHHHHHHHhhCCCCcccCCCeEEEeecCceeecCccccCCCCCCccccCC
Q 027269          100 VTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGS  179 (225)
Q Consensus       100 ~~~~vf~di~v~~t~~G~IvIeL~~~~aP~tv~NFl~L~~G~kG~~Y~gt~FhRVip~f~IQgGd~~~~~g~gg~si~g~  179 (225)
                      .++.|+|+     |+.|+|+||||.++||+||+||++||  ++|| |+|+.||||+|+|||||||++...+   ...++.
T Consensus         3 ~~~~v~~~-----t~~G~i~ieL~~~~aP~t~~NF~~L~--~~g~-Y~g~~FhRvi~~f~iQgGd~~~~~~---~~~~g~   71 (166)
T 1v9t_A            3 GDPHVLLT-----TSAGNIELELDKQKAPVSVQNFVDYV--NSGF-YNNTTFHRVIPGFMIQGGGFTEQMQ---QKKPNP   71 (166)
T ss_dssp             CSCEEEEE-----ETTEEEEEEECTTTCHHHHHHHHHHH--HTTT-TTTCBEEEEETTTEEEESSBCTTCC---BCCCCC
T ss_pred             CCeEEEEE-----eCCccEEEEEcCCCCcHHHHHHHHHh--ccCC-CCCCEEEEEECCcEEEcCCcCcCCC---CCCCCC
Confidence            35678877     58999999999999999999999999  6899 9999999999999999999874432   234678


Q ss_pred             CCCCCccCccCCCceEEEEecC-CCCCCCceEEEEcCCCCcccCC
Q 027269          180 SFEDESFVLKHVGPGVLSMANA-GPNTNGSQFFICTVKVRWQLCF  223 (225)
Q Consensus       180 ~~~dE~~~l~H~~~G~LsMa~~-gpns~gSQFfItl~~~p~LDg~  223 (225)
                      .|++|.....|+++|+|||||. +||+++||||||+.++||||+.
T Consensus        72 ~~~dE~~~~l~~~~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~  116 (166)
T 1v9t_A           72 PIKNEADNGLRNTRGTIAMARTADKDSATSQFFINVADNAFLDHG  116 (166)
T ss_dssp             CBCCCGGGSCCCCTTEEEECCCSSTTCBCSCEEEESSCCGGGSCC
T ss_pred             cccccccccccCCceEEEEeecCCCCCccceEEEEeCCccccCCc
Confidence            8999987656668999999997 5999999999999999999986


No 34 
>1lop_A Cyclophilin A; rotamase, isomerase-isomerase inhibitor complex; HET: NIT; 1.80A {Escherichia coli} SCOP: b.62.1.1 PDB: 2nul_A 2rs4_A
Probab=100.00  E-value=6.8e-35  Score=241.89  Aligned_cols=105  Identities=35%  Similarity=0.604  Sum_probs=95.1

Q ss_pred             CeeceeEEEEEcCCCChhhHHHHHHHhhCCCCcccCCCeEEEeecCceeecCccccCCCCCCccccCCCCCCCccC-ccC
Q 027269          112 GKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGSSFEDESFV-LKH  190 (225)
Q Consensus       112 ~t~~G~IvIeL~~~~aP~tv~NFl~L~~G~kG~~Y~gt~FhRVip~f~IQgGd~~~~~g~gg~si~g~~~~dE~~~-l~H  190 (225)
                      .|+.|+|+||||.++||+||+||++||  ++|| |+|+.||||+|+|||||||++.++   |.+++++.|++|+.. ++|
T Consensus         5 ~T~~G~i~ieL~~~~aP~t~~NF~~L~--~~g~-Y~g~~FhRvi~~f~iQgGd~~~~~---g~~~~g~~~~dE~~~~l~~   78 (164)
T 1lop_A            5 HTNHGDIVIKTFDDKAPETVKNFLDYC--REGF-YNNTIFHRVINGFMIQGGGFEPGM---KQKATKEPIKNEANNGLKN   78 (164)
T ss_dssp             EETTEEEEEEECTTTSHHHHHHHHHHH--HTTT-TTTEECCEEETTTEEEESSEETTT---EECCCCCCBCCCCCSSCCC
T ss_pred             EeCCCCEEEEEeCCCCcHHHHHHHHHH--hcCC-CCCCEEEEEeCCceEecCCcccCC---CcCCCCCcccccccccccc
Confidence            478999999999999999999999999  5899 999999999999999999997543   456789999999865 556


Q ss_pred             CCceEEEEecC-CCCCCCceEEEEcCCCCcccCC
Q 027269          191 VGPGVLSMANA-GPNTNGSQFFICTVKVRWQLCF  223 (225)
Q Consensus       191 ~~~G~LsMa~~-gpns~gSQFfItl~~~p~LDg~  223 (225)
                       .+|+|||||. +||+++||||||+.++||||+.
T Consensus        79 -~~G~lsmA~~~~p~s~gSQFfI~~~~~~~Ld~~  111 (164)
T 1lop_A           79 -TRGTLAMARTQAPHSATAQFFINVVDNDFLNFS  111 (164)
T ss_dssp             -CTTEEEECCCSSTTCBCSCEEEESSCCGGGSCC
T ss_pred             -CccEEEEeecCCCCCccceEEEEcCCccccCCc
Confidence             6999999975 7999999999999999999996


No 35 
>3s6m_A Peptidyl-prolyl CIS-trans isomerase; seattle structural genomics center for infectious disease; 1.65A {Burkholderia pseudomallei} SCOP: b.62.1.1 PDB: 3t1u_A*
Probab=100.00  E-value=5.1e-34  Score=237.00  Aligned_cols=105  Identities=31%  Similarity=0.422  Sum_probs=92.9

Q ss_pred             eeceeEEEEEcCCCChhhHHHHHHHhhCCCCcccCCCeEEEeecCceeecCccccCCCCCCccccCCCCCCCccCccCCC
Q 027269          113 KPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGSSFEDESFVLKHVG  192 (225)
Q Consensus       113 t~~G~IvIeL~~~~aP~tv~NFl~L~~G~kG~~Y~gt~FhRVip~f~IQgGd~~~~~g~gg~si~g~~~~dE~~~l~H~~  192 (225)
                      |+.|+|+||||.++||+||+||++||  ++|| |+|+.||||+|+|||||||++.+.+   ...++..+++|.....+++
T Consensus        10 T~~G~i~ieL~~~~aP~t~~NF~~L~--~~g~-Y~g~~FhRvi~~f~iQgGd~~~~~~---~~~~~~~~~~E~~~~l~~~   83 (167)
T 3s6m_A           10 TNHGVIKLELDEAKAPKTVENFLNYV--KKGH-YDGTIFHRVINGFMIQGGGFEPGLK---QKPTDAPIANEANNGLKND   83 (167)
T ss_dssp             ETTEEEEEEECTTTCHHHHHHHHHHH--HHTT-TTTEECCEEETTTEEEESSEETTTE---ECCCCCCBCCCGGGCCCCC
T ss_pred             eCCceEEEEEeCCCCcHHHHHHHHHh--hhcc-cCCCEeEEecCCcEEEeccccCCCC---CCCCCCccCCcccccccCC
Confidence            79999999999999999999999999  5789 9999999999999999999985432   2456788999965444448


Q ss_pred             ceEEEEec-CCCCCCCceEEEEcCCCCcccCC
Q 027269          193 PGVLSMAN-AGPNTNGSQFFICTVKVRWQLCF  223 (225)
Q Consensus       193 ~G~LsMa~-~gpns~gSQFfItl~~~p~LDg~  223 (225)
                      +|+||||| .+||+++||||||+.++||||++
T Consensus        84 ~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~  115 (167)
T 3s6m_A           84 TYTIAMARTNDPHSATAQFFINVNDNEFLNHS  115 (167)
T ss_dssp             TTEEEECCCSSTTCBCSCEEEESSCCGGGSCC
T ss_pred             ccEEEEecCCCCCCccceEEEEcCCchhcCCc
Confidence            99999999 57999999999999999999987


No 36 
>3rfy_A Peptidyl-prolyl CIS-trans isomerase CYP38, chloro; cyclophilin, peptidyl prolyl isomerase, ppiase, TLP,; 2.39A {Arabidopsis thaliana}
Probab=99.97  E-value=1.6e-32  Score=253.11  Aligned_cols=123  Identities=24%  Similarity=0.359  Sum_probs=104.9

Q ss_pred             ccccceEEEEEEEC--C---eeceeEEEEEcCCCChhhHHHHHHHhhCCCCcccCCCeEEEeecCceeecCccccCCCCC
Q 027269           98 AKVTTKVFFDVDIG--G---KPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTG  172 (225)
Q Consensus        98 ~~~~~~vf~di~v~--~---t~~G~IvIeL~~~~aP~tv~NFl~L~~G~kG~~Y~gt~FhRVip~f~IQgGd~~~~~g~g  172 (225)
                      +.++.++++++.+.  +   ++.|+|+||||.+.||+||+||++||  ++|| |+|+.|||| |+|||||||++ ++|.|
T Consensus       165 P~l~gra~V~m~t~~~~~~~~~~G~I~IeL~~d~AP~Tv~NFl~L~--~~Gf-YdGt~FHRV-~gFmIQgGDp~-g~G~G  239 (369)
T 3rfy_A          165 PLLKGRASVDMKVKIKDNPNIEDCVFRIVLDGYNAPVTAGNFVDLV--ERHF-YDGMEIQRS-DGFVVQTGDPE-GPAEG  239 (369)
T ss_dssp             CEECSEEEEEEEEECCSCSSCSEEEEEEEEETTTCHHHHHHHHHHH--HTTT-TTTEECEEE-EEEEECCCCCC-CCCSC
T ss_pred             ccCCCCeEEEEEEeccCCCcccceEEEEEEeCCCCcHHHHHHHHHh--hcCC-cCCCeeeee-CCeeEecCCCC-CCCCC
Confidence            45566666555553  2   35999999999999999999999999  5899 999999999 99999999997 56655


Q ss_pred             ---------------------CccccCCCCCCCcc-----CccCCCceEEEEecC--CCCCCCceEEEEc-------CCC
Q 027269          173 ---------------------GISIYGSSFEDESF-----VLKHVGPGVLSMANA--GPNTNGSQFFICT-------VKV  217 (225)
Q Consensus       173 ---------------------g~si~g~~~~dE~~-----~l~H~~~G~LsMa~~--gpns~gSQFfItl-------~~~  217 (225)
                                           +.++|+..|++|++     .++|+++|+|||||.  +||+++||||||+       .++
T Consensus       240 ~~~~~~g~~~~iP~E~~~~G~g~piyg~~fedegf~~~~~~L~h~~~G~LsMAns~~gPnSngSQFFItl~d~~L~~~~~  319 (369)
T 3rfy_A          240 FIDPSTEKTRTVPLEIMVTGEKTPFYGSTLEELGLYKAQVVIPFNAFGTMAMAREEFENDSGSSQVFWLLKESELTPSNS  319 (369)
T ss_dssp             CCSCCCCCCCSSSSSSCSSSSCCSCCCSSTGGGTEEEEEEEECCCCCCCCCCSSCCCCCCCSSCCCCCCCEEEEECSCCC
T ss_pred             ccCcccCcCcccCccccccCCCCCcCCCccccccccccccccccCCCceEEEeecCCCCCCccceEEEEecccccCCCCC
Confidence                                 45788888888854     688999999999998  8999999999999       478


Q ss_pred             CcccCCCC
Q 027269          218 RWQLCFFC  225 (225)
Q Consensus       218 p~LDg~~~  225 (225)
                      |||||+|.
T Consensus       320 ~~LDgkyt  327 (369)
T 3rfy_A          320 NILDGRYA  327 (369)
T ss_dssp             SSSCSCEE
T ss_pred             cccCCCee
Confidence            99999873


No 37 
>3kop_A Uncharacterized protein; protein with A cyclophilin-like fold, structural genomics, J center for structural genomics, JCSG; 1.90A {Arthrobacter SP}
Probab=72.18  E-value=4.1  Score=34.01  Aligned_cols=32  Identities=19%  Similarity=0.350  Sum_probs=25.9

Q ss_pred             EEEEEECCeecee-EEEEEcCCCChhhHHHHHHHh
Q 027269          105 FFDVDIGGKPAGR-IVMGLFGDVVPKTAENFRALC  138 (225)
Q Consensus       105 f~di~v~~t~~G~-IvIeL~~~~aP~tv~NFl~L~  138 (225)
                      |+.|++.  ..|- ++.+|..+.||+||+.|+++-
T Consensus        23 ~i~itl~--~~g~~~~A~Lldd~APkTcaA~~~~L   55 (188)
T 3kop_A           23 YINITLE--KRGVTCKALLLDDVAPRTSKAVWDAL   55 (188)
T ss_dssp             EEEEEET--TTTEEEEEEECTTTSHHHHHHHHHHC
T ss_pred             EEEEEEe--cCCeEEEEEEccccChHHHHHHHHhC
Confidence            5667663  4454 899999999999999999975


No 38 
>2nnz_A Hypothetical protein; beta-barrel, structural genomics, ontario centre for structu proteomics, OCSP, unknown function; NMR {Archaeoglobus fulgidus}
Probab=67.71  E-value=4.5  Score=32.50  Aligned_cols=30  Identities=10%  Similarity=0.237  Sum_probs=24.7

Q ss_pred             EEEEECCeeceeEEEEEcCCCChhhHHHHHHHh
Q 027269          106 FDVDIGGKPAGRIVMGLFGDVVPKTAENFRALC  138 (225)
Q Consensus       106 ~di~v~~t~~G~IvIeL~~~~aP~tv~NFl~L~  138 (225)
                      +.|.+++   ..++++|+.+.||+|++-|+++-
T Consensus        32 I~i~~~~---~~~~a~L~D~~aP~Ta~~f~~~L   61 (153)
T 2nnz_A           32 LRIRFES---AECEVELYEEWAPETVRAIADAL   61 (153)
T ss_dssp             EEEEETT---EEEEECCCTTSCHHHHHHHHHTC
T ss_pred             EEEEECC---EEEEEEEcCCCCHHHHHHHHHhC
Confidence            3455554   67999999999999999999974


Done!