BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027271
(225 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q94JU3|CSN7_ARATH COP9 signalosome complex subunit 7 OS=Arabidopsis thaliana GN=CSN7
PE=1 SV=1
Length = 260
Score = 366 bits (940), Expect = e-101, Method: Compositional matrix adjust.
Identities = 175/223 (78%), Positives = 196/223 (87%)
Query: 1 MDIEQRQAELIDHFVKQASNQKGAALGSVIVEATSQPSLFAFSEILAVPNIAEFEGTENS 60
MDIEQ+QAE+ID VK+AS K ALG +I+EATS PSLFAFSEILA+PN+A+ EGT +S
Sbjct: 1 MDIEQKQAEIIDQLVKRASTCKSEALGPLIIEATSHPSLFAFSEILALPNVAQLEGTTDS 60
Query: 61 KYLDMLRLFAHGTWSDYKNNAGHLPQLVPDQVLKLKQLTVLTLAETNKVLPYDELMEELD 120
YLD+LRLFAHGTW DYK NA LP L PDQ+LKLKQLTVLTLAE+NKVLPYD LM ELD
Sbjct: 61 VYLDLLRLFAHGTWGDYKCNATRLPHLSPDQILKLKQLTVLTLAESNKVLPYDTLMVELD 120
Query: 121 VTNVRELEDFLINECMYTGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGSMIQTLSNWLTT 180
V+NVRELEDFLINECMY GIVRGKLDQL+RCFEV FAAGRDLRPGQLG+M+ TLSNWL T
Sbjct: 121 VSNVRELEDFLINECMYAGIVRGKLDQLKRCFEVPFAAGRDLRPGQLGNMLHTLSNWLNT 180
Query: 181 SDNLLISIQEKIKWADSMNEMDKKHRKDLEEKVEEAKKSLSHK 223
S+NLLISIQ+KIKWAD+M+EMDKKHRK+ EE VEE KKSLS K
Sbjct: 181 SENLLISIQDKIKWADNMSEMDKKHRKEAEEGVEEVKKSLSMK 223
>sp|Q55BD5|CSN7_DICDI COP9 signalosome complex subunit 7 OS=Dictyostelium discoideum
GN=csn7 PE=1 SV=1
Length = 259
Score = 174 bits (442), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 84/187 (44%), Positives = 125/187 (66%), Gaps = 1/187 (0%)
Query: 13 HFVKQASNQKGAALGSVIVEATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLRLFAHG 72
FV A + KG A+ S+I +A + PS+F F E+L +PN+ + + TE Y D+L +FA+G
Sbjct: 16 QFVVLAKSSKGRAIVSIIEKALNHPSVFVFGELLDMPNVQQLKETEFKNYYDLLLIFAYG 75
Query: 73 TWSDYKNNAGHLPQLVPDQVLKLKQLTVLTLAETNKVLPYDELMEELDVTNVRELEDFLI 132
++ DYKN LPQL P + KLKQLT++ L+ T+ V+PY L E++++TNVRELED +I
Sbjct: 76 SFIDYKNKKDSLPQLTPQMITKLKQLTIVFLSSTSNVIPYSVLQEQIEITNVRELEDLII 135
Query: 133 NECMYTGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGSMIQTLSNWLTTSDNLLISIQEKI 192
+ +Y I++GKLDQ + E+ F+ GRD++P QL SMI L+NW +TS LL I I
Sbjct: 136 -DSIYQNIIKGKLDQKNKHLEIDFSIGRDVQPEQLDSMINCLNNWSSTSQKLLDDISGLI 194
Query: 193 KWADSMN 199
+D ++
Sbjct: 195 THSDKVH 201
>sp|Q9H9Q2|CSN7B_HUMAN COP9 signalosome complex subunit 7b OS=Homo sapiens GN=COPS7B PE=1
SV=1
Length = 264
Score = 152 bits (383), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 129/213 (60%), Gaps = 1/213 (0%)
Query: 8 AELIDHFVKQASNQKGAALGSVIVEATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLR 67
+ L++ F+ A G+AL ++I + P ++ F E+L + N+ E N+ YL +L
Sbjct: 9 SNLLEQFILLAKGTSGSALTALISQVLEAPGVYVFGELLELANVQELAEGANAAYLQLLN 68
Query: 68 LFAHGTWSDYKNNAGHLPQLVPDQVLKLKQLTVLTLAETNKVLPYDELMEELDVTNVREL 127
LFA+GT+ DY N LP+L Q KLK LT+++LA K +PY L+++L++ N+REL
Sbjct: 69 LFAYGTYPDYIANKESLPELSTAQQNKLKHLTIVSLASRMKCIPYSVLLKDLEMRNLREL 128
Query: 128 EDFLINECMYTGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGSMIQTLSNWLTTSDNLLIS 187
ED +I E +YT I++GKLDQ + EV F GRD+R + ++++TL W + +L+
Sbjct: 129 EDLII-EAVYTDIIQGKLDQRNQLLEVDFCIGRDIRKKDINNIVKTLHEWCDGCEAVLLG 187
Query: 188 IQEKIKWADSMNEMDKKHRKDLEEKVEEAKKSL 220
I++++ A+ E + ++ +E +V KK+L
Sbjct: 188 IEQQVLRANQYKENHNRTQQQVEAEVTNIKKTL 220
>sp|Q2KI56|CSN7B_BOVIN COP9 signalosome complex subunit 7b OS=Bos taurus GN=COPS7B PE=2
SV=1
Length = 264
Score = 152 bits (383), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 129/213 (60%), Gaps = 1/213 (0%)
Query: 8 AELIDHFVKQASNQKGAALGSVIVEATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLR 67
+ L++ F+ A G+AL ++I + P ++ F E+L + N+ E N+ YL +L
Sbjct: 9 SNLLEQFILLAKGTSGSALTALISQVLEAPGVYVFGELLELANVQELAEGANAAYLQLLN 68
Query: 68 LFAHGTWSDYKNNAGHLPQLVPDQVLKLKQLTVLTLAETNKVLPYDELMEELDVTNVREL 127
LFA+GT+ DY N LP+L Q KLK LT+++LA K +PY L+++L++ N+REL
Sbjct: 69 LFAYGTYPDYIANKESLPELSTAQQNKLKHLTIVSLASRMKCIPYSVLLKDLEMRNLREL 128
Query: 128 EDFLINECMYTGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGSMIQTLSNWLTTSDNLLIS 187
ED +I E +YT I++GKLDQ + EV F GRD+R + ++++TL W + +L+
Sbjct: 129 EDLII-EAVYTDIIQGKLDQRNQLLEVDFCIGRDIRKKDINNIVKTLHEWCDGCEAVLLG 187
Query: 188 IQEKIKWADSMNEMDKKHRKDLEEKVEEAKKSL 220
I++++ A+ E + ++ +E +V KK+L
Sbjct: 188 IEQQVLRANQYKENHSRTQQQVEAEVTNIKKTL 220
>sp|Q8BV13|CSN7B_MOUSE COP9 signalosome complex subunit 7b OS=Mus musculus GN=Cops7b PE=1
SV=1
Length = 264
Score = 151 bits (382), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 129/213 (60%), Gaps = 1/213 (0%)
Query: 8 AELIDHFVKQASNQKGAALGSVIVEATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLR 67
+ L++ F+ A G+AL ++I + P ++ F E+L + N+ E N+ YL +L
Sbjct: 9 SNLLEQFILLAKGTSGSALTTLISQVLEAPGVYVFGELLELANVQELAEGANAAYLQLLN 68
Query: 68 LFAHGTWSDYKNNAGHLPQLVPDQVLKLKQLTVLTLAETNKVLPYDELMEELDVTNVREL 127
LFA+GT+ DY N LP+L Q KLK LT+++LA K +PY L+++L++ N+REL
Sbjct: 69 LFAYGTYPDYIANKESLPELSVAQQNKLKHLTIVSLASRMKCIPYSVLLKDLEMRNLREL 128
Query: 128 EDFLINECMYTGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGSMIQTLSNWLTTSDNLLIS 187
ED +I E +YT I++GKLDQ + EV F GRD+R + ++++TL W + +L+
Sbjct: 129 EDLII-EAVYTDIIQGKLDQRNQLLEVDFCIGRDIRKKDINNIVKTLHEWCDGCEAVLLG 187
Query: 188 IQEKIKWADSMNEMDKKHRKDLEEKVEEAKKSL 220
I++++ A+ E + ++ +E +V KK+L
Sbjct: 188 IEQQVLRANQYKENHHRTQQQVEAEVSNIKKTL 220
>sp|Q9V4S8|CSN7_DROME COP9 signalosome complex subunit 7 OS=Drosophila melanogaster
GN=CSN7 PE=1 SV=2
Length = 278
Score = 142 bits (359), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/206 (36%), Positives = 124/206 (60%), Gaps = 5/206 (2%)
Query: 10 LIDHFVKQASNQKGAALGSVIVEATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLRLF 69
++ F A + GAAL VI +A P++F F E+LA P++ + + +SK+ + L LF
Sbjct: 19 FLEKFCVLAKSSTGAALLDVIRQALEAPNVFVFGELLAEPSVLQLKDGPDSKHFETLNLF 78
Query: 70 AHGTWSDYKNNAGHLPQLVPDQVLKLKQLTVLTLAETNKVLPYDELMEELDVTNVRELED 129
A+GT+ +Y+ +L P KL+ LT+++LA K +PY L+ EL++ NVR LED
Sbjct: 79 AYGTYKEYRAQPEKFIELTPAMQKKLQHLTIVSLAIKAKSIPYALLLSELEIDNVRHLED 138
Query: 130 FLINECMYTGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGSMIQTLSNWLTTSDNLLISIQ 189
+I E +Y I+ GKL Q R EV +A GRD+ PG G +++TL W+ + D++ I+
Sbjct: 139 III-EAIYADIIHGKLFQNTRILEVDYAQGRDIPPGYTGQIVETLQAWVNSCDSVSNCIE 197
Query: 190 EKIKWADSMNEMDKKHRKDLEEKVEE 215
+IK+A++ +K R +E+VE+
Sbjct: 198 MQIKYANA----EKSKRLINKERVEQ 219
>sp|Q9CZ04|CSN7A_MOUSE COP9 signalosome complex subunit 7a OS=Mus musculus GN=Cops7a PE=1
SV=2
Length = 275
Score = 137 bits (346), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 123/209 (58%), Gaps = 1/209 (0%)
Query: 12 DHFVKQASNQKGAALGSVIVEATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLRLFAH 71
+ F+ A + KGAAL ++I + P ++ F E+L +PN+ E ++ + +L +FA+
Sbjct: 13 EQFLLLAKSAKGAALATLIHQVLEAPGVYVFGELLDMPNVRELAESDFASTFRLLTVFAY 72
Query: 72 GTWSDYKNNAGHLPQLVPDQVLKLKQLTVLTLAETNKVLPYDELMEELDVTNVRELEDFL 131
GT++DY A +LP L Q KL+ L+V+TLA K +PY L+E L + NVR+LED +
Sbjct: 73 GTYADYLAEARNLPPLTDAQKNKLRHLSVVTLAAKVKCIPYAVLLEALALRNVRQLEDLV 132
Query: 132 INECMYTGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGSMIQTLSNWLTTSDNLLISIQEK 191
I E +Y ++RG LDQ + EV ++ GRD++ L ++ QTL W + +L I+E+
Sbjct: 133 I-EAVYADVLRGSLDQRNQRLEVDYSIGRDIQRQDLSAIAQTLQEWCVGCEVVLSGIEEQ 191
Query: 192 IKWADSMNEMDKKHRKDLEEKVEEAKKSL 220
+ A+ E ++ +E +V KK++
Sbjct: 192 VSRANQHKEQQLGLKQQIESEVANLKKTI 220
>sp|Q5R762|CSN7A_PONAB COP9 signalosome complex subunit 7a OS=Pongo abelii GN=COPS7A PE=2
SV=1
Length = 275
Score = 136 bits (343), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 123/209 (58%), Gaps = 1/209 (0%)
Query: 12 DHFVKQASNQKGAALGSVIVEATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLRLFAH 71
+ F+ A + KGAAL ++I + P ++ F E+L +PN+ E ++ + +L +FA+
Sbjct: 13 EQFLLLAKSAKGAALATLIHQVLEAPGVYVFGELLDMPNVRELAESDFASTFRLLTVFAY 72
Query: 72 GTWSDYKNNAGHLPQLVPDQVLKLKQLTVLTLAETNKVLPYDELMEELDVTNVRELEDFL 131
GT++DY A +LP L Q KL+ L+V+TLA K +PY L+E L + NVR+LED +
Sbjct: 73 GTYADYLAEARNLPPLTEAQKNKLRHLSVVTLAAKVKCIPYAVLLEALALRNVRQLEDLV 132
Query: 132 INECMYTGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGSMIQTLSNWLTTSDNLLISIQEK 191
I E +Y ++RG LDQ + EV ++ GRD++ L ++ +TL W + +L I+E+
Sbjct: 133 I-EAVYADVLRGSLDQRNQRLEVDYSIGRDIQRQDLSAIARTLQEWCVGCEVVLSGIEEQ 191
Query: 192 IKWADSMNEMDKKHRKDLEEKVEEAKKSL 220
+ A+ E ++ +E +V KK++
Sbjct: 192 VSRANQHKEQQLGLKQQIESEVANLKKTI 220
>sp|Q9UBW8|CSN7A_HUMAN COP9 signalosome complex subunit 7a OS=Homo sapiens GN=COPS7A PE=1
SV=1
Length = 275
Score = 136 bits (343), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 123/209 (58%), Gaps = 1/209 (0%)
Query: 12 DHFVKQASNQKGAALGSVIVEATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLRLFAH 71
+ F+ A + KGAAL ++I + P ++ F E+L +PN+ E ++ + +L +FA+
Sbjct: 13 EQFLLLAKSAKGAALATLIHQVLEAPGVYVFGELLDMPNVRELAESDFASTFRLLTVFAY 72
Query: 72 GTWSDYKNNAGHLPQLVPDQVLKLKQLTVLTLAETNKVLPYDELMEELDVTNVRELEDFL 131
GT++DY A +LP L Q KL+ L+V+TLA K +PY L+E L + NVR+LED +
Sbjct: 73 GTYADYLAEARNLPPLTEAQKNKLRHLSVVTLAAKVKCIPYAVLLEALALRNVRQLEDLV 132
Query: 132 INECMYTGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGSMIQTLSNWLTTSDNLLISIQEK 191
I E +Y ++RG LDQ + EV ++ GRD++ L ++ +TL W + +L I+E+
Sbjct: 133 I-EAVYADVLRGSLDQRNQRLEVDYSIGRDIQRQDLSAIARTLQEWCVGCEVVLSGIEEQ 191
Query: 192 IKWADSMNEMDKKHRKDLEEKVEEAKKSL 220
+ A+ E ++ +E +V KK++
Sbjct: 192 VSRANQHKEQQLGLKQQIESEVANLKKTI 220
>sp|Q7SGS1|CSN7A_NEUCR COP9 signalosome complex subunit 7a OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=csn-7a PE=1 SV=1
Length = 417
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 99/184 (53%), Gaps = 25/184 (13%)
Query: 16 KQASNQKGAALGSVIVEATSQPSLFAFSEILAVPNIAEFEGT-ENSKYLDMLRLFAHGTW 74
K A++ + AA ++ TS P+ F F+E+L P I E + E S YL +L++F+HGT+
Sbjct: 18 KSATSPRAAA--DLVTRVTSAPNTFIFTELLQTPQIQSLEYSHEFSSYLTLLQIFSHGTY 75
Query: 75 SDYKNNAGHLPQLVPDQVLKLKQLTVLTLA----------------ETNKVLP----YDE 114
+DY NA LP L DQ LKL+QL++LTL E N+ P Y
Sbjct: 76 ADYIANASALPALNDDQKLKLRQLSLLTLVANDGSNVPLDYDAMQRENNQAQPPNQSYAS 135
Query: 115 LMEELDVTNVRELEDFLINECMYTGIVRGKLDQLRRCFEV-QFAAGRDLRPGQLGSMIQT 173
L L++++ RELE+ +I+ +Y G++ G+LD ++ AA RD+ + ++ +
Sbjct: 136 LTRRLELSSARELEELVIS-AIYAGLIEGQLDPANEMVQINSVAALRDVPARGVNGLLSS 194
Query: 174 LSNW 177
L W
Sbjct: 195 LQGW 198
>sp|Q00648|CSN7_EMENI COP9 signalosome complex subunit 7 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=csnG PE=1 SV=1
Length = 327
Score = 81.6 bits (200), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 108/220 (49%), Gaps = 15/220 (6%)
Query: 1 MD-IEQRQAELIDHFVKQASNQKGAA---LGSVIVEATSQPSLFAFSEILAVPNIAEFEG 56
MD + R + + F+ + + + S+I ATS P + F+E+L P +
Sbjct: 1 MDQVHHRALDALQSFIALTDSSSATSPRYIASIITNATSSPHTYVFAELLERPAVQALRS 60
Query: 57 ----TENSKYLDMLRLFAHGTWSDYKNNAGHLPQLVPDQVLKLKQLTVLTLAETNKVLPY 112
E YL +L +FA GTW DY+ +LP L +Q KL+ LT+L+LA T K L Y
Sbjct: 61 PDTPAEFQSYLTLLEIFAWGTWQDYQQTP-NLPPLSEEQARKLRLLTLLSLASTIKPLTY 119
Query: 113 DELMEELDVTNVRELEDFLINECMYTGIVRGKLDQLRRCFEV---QFAAGRDLRPGQLGS 169
+ LM L ++ ELE L+ +Y+ ++ G+L V A RD++P L +
Sbjct: 120 EALMTSLSLSAPSELES-LVTTAIYSSLITGRLSPATNPPTVNVTSVAPLRDVKPSSLPT 178
Query: 170 MIQTLSNWLTTSDNLLISIQEKIK--WADSMNEMDKKHRK 207
MI TL+ W +++ I+ +I ADS K+H +
Sbjct: 179 MISTLTAWEARCGSVISDIETEIAKIRADSAQRRQKEHAR 218
>sp|P68395|CSN7_BRAOL COP9 signalosome complex subunit 7 (Fragments) OS=Brassica oleracea
GN=CSN7 PE=1 SV=1
Length = 71
Score = 71.2 bits (173), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 44/62 (70%), Gaps = 4/62 (6%)
Query: 65 MLRLFAHGTWSDYKNNAGHLPQLVPDQVLKLKQLTVLTLAETNKVLPYDELMEELDVTNV 124
++RLFAHGTW DYK NA +PQL PDQ+ LKQLTVLTLAE+NK + + M E+D
Sbjct: 8 LVRLFAHGTWGDYKCNASRIPQLSPDQI--LKQLTVLTLAESNK--KWADNMSEIDKKEA 63
Query: 125 RE 126
E
Sbjct: 64 EE 65
>sp|A7SPX9|EIF3M_NEMVE Eukaryotic translation initiation factor 3 subunit M
OS=Nematostella vectensis GN=v1g192238 PE=3 SV=1
Length = 379
Score = 57.4 bits (137), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 87/184 (47%), Gaps = 15/184 (8%)
Query: 9 ELIDHFVKQASNQKGAALGSVIVEATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLRL 68
EL+ + + ++ S +V ++P++ IL++ +A +G +L++
Sbjct: 189 ELLSTYTDENASAAREDAKSCVVSCLTKPNVLIMDNILSLKPVAVLQG---DPIYQLLQI 245
Query: 69 FAHGTWSDYK----NNAGHLPQLVPDQVLKLKQLTVLTLAETNKV---LPYDELMEELDV 121
F G DYK +N + + + LK++ VLTL K + Y++L +L +
Sbjct: 246 FVSGDVQDYKKFYDSNTDFINSIGLSHEMNLKKMRVLTLMSIGKETDEISYEDLATKLGI 305
Query: 122 TNVRELEDFLINECMYTGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGSMIQTLSNWLTTS 181
++ E+E FLI E + TG+V+ +LDQ+ R + A R Q ++ L W
Sbjct: 306 SS-DEIEQFLI-EAIQTGLVKARLDQVHRKVIISSVAQRTFGINQWQNLHSRLVKW---R 360
Query: 182 DNLL 185
DNLL
Sbjct: 361 DNLL 364
>sp|Q5ZJ64|EIF3M_CHICK Eukaryotic translation initiation factor 3 subunit M OS=Gallus
gallus GN=EIF3M PE=2 SV=1
Length = 374
Score = 50.8 bits (120), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 84/193 (43%), Gaps = 15/193 (7%)
Query: 8 AELIDHFVKQASNQKGAALGSVIVEATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLR 67
EL+ + + ++Q IV A P+ F F +LA+ + EG D+L
Sbjct: 186 VELLGSYTEDNASQARVDAHRCIVRALKDPNTFLFDHLLALKPVKFLEG---ELIHDLLT 242
Query: 68 LFAHGTWSDY-------KNNAGHLPQLVPDQVLKLKQLTVLTLAETNKVLPYDELMEELD 120
+F Y K+ L L + K++ LT + +A NK + +D + +EL
Sbjct: 243 IFVSAKLVSYVKFYQNNKDFIDSLGLLHEQNMAKMRLLTFMGMAVENKEISFDTMQQELQ 302
Query: 121 VTNVRELEDFLINECMYTGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGSMIQTLSNW--- 177
+ ++E F+I + + T +V K+DQ +R V + R Q + TL+ W
Sbjct: 303 I-GADDVEAFVI-DAVKTKMVYCKIDQTQRKVVVSHSTHRTFGKQQWQQLYDTLNTWKQN 360
Query: 178 LTTSDNLLISIQE 190
L N L+S+ +
Sbjct: 361 LNQVKNSLLSLSD 373
>sp|Q94261|EIF3M_CAEEL COP9/Signalosome and eIF3 complex-shared subunit 1
OS=Caenorhabditis elegans GN=cif-1 PE=1 SV=1
Length = 390
Score = 50.4 bits (119), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 74/171 (43%), Gaps = 25/171 (14%)
Query: 7 QAELIDHFVKQASNQKGAALGS---------------VIVEATSQPSLFAFSEILAVPNI 51
+A L+D V QA+ A LG+ + A P F+F + + +
Sbjct: 178 RALLVDQRVDQAAKVMTALLGTYTEKDAAAARDDAMECVRTAVVDPKSFSFDHLERLSAV 237
Query: 52 AEFEGTENSKYLDMLRLFAHGTWSDYKNNAGHLPQLVPDQVL--------KLKQLTVLTL 103
+ T + L LF GT DYK P+ V + + K++ LT+++L
Sbjct: 238 KALK-TSDPLMFTALELFISGTLKDYKEFVAKNPKFVTEHLKVDETILLKKIRLLTLMSL 296
Query: 104 AETNKVLPYDELMEELDVTNVRELEDFLINECMYTGIVRGKLDQLRRCFEV 154
AE + DEL ++LD+ LE+F+I+ I GK++++ R V
Sbjct: 297 AEEKNEISLDELAKQLDILADETLEEFVIDAIQVNAI-SGKINEMARTLIV 346
>sp|Q99JX4|EIF3M_MOUSE Eukaryotic translation initiation factor 3 subunit M OS=Mus
musculus GN=Eif3m PE=2 SV=1
Length = 374
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 84/193 (43%), Gaps = 15/193 (7%)
Query: 8 AELIDHFVKQASNQKGAALGSVIVEATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLR 67
EL+ + + ++Q IV A P+ F F +L + + EG D+L
Sbjct: 186 VELLGSYTEDNASQARVDAHRCIVRALKDPNAFLFDHLLTLKPVKFLEG---ELIHDLLT 242
Query: 68 LFAHGTWSDY-------KNNAGHLPQLVPDQVLKLKQLTVLTLAETNKVLPYDELMEELD 120
+F + Y K+ L L + K++ LT + +A NK + +D + +EL
Sbjct: 243 IFVSAKLASYVKFYQNNKDFIDSLGLLHEQNMAKMRLLTFMGMAVENKEISFDTMQQELQ 302
Query: 121 VTNVRELEDFLINECMYTGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGSMIQTLSNW--- 177
+ ++E F+I+ + T +V K+DQ +R V + R Q + TL+ W
Sbjct: 303 I-GADDVEAFVID-AVRTKMVYCKIDQTQRKVVVSHSTHRTFGKQQWQQLYDTLNAWKQN 360
Query: 178 LTTSDNLLISIQE 190
L N L+S+ +
Sbjct: 361 LNKVKNSLLSLSD 373
>sp|Q5R8C4|EIF3M_PONAB Eukaryotic translation initiation factor 3 subunit M OS=Pongo
abelii GN=EIF3M PE=2 SV=1
Length = 374
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 84/193 (43%), Gaps = 15/193 (7%)
Query: 8 AELIDHFVKQASNQKGAALGSVIVEATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLR 67
EL+ + + ++Q IV A P+ F F +L + + EG D+L
Sbjct: 186 VELLGSYTEDNASQARVDAHRCIVRALKDPNAFLFDHLLTLKPVKFLEG---ELIHDLLT 242
Query: 68 LFAHGTWSDY-------KNNAGHLPQLVPDQVLKLKQLTVLTLAETNKVLPYDELMEELD 120
+F + Y K+ L L + K++ LT + +A NK + +D + +EL
Sbjct: 243 IFVSAKLASYVKFYQNNKDFIDSLGLLHEQNMAKMRLLTFMGMAVENKEISFDTMQQELQ 302
Query: 121 VTNVRELEDFLINECMYTGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGSMIQTLSNW--- 177
+ ++E F+I+ + T +V K+DQ +R V + R Q + TL+ W
Sbjct: 303 I-GADDVEAFVID-AVRTKMVYCKIDQTQRKVVVSHSTHRTFGKQQWQQLYDTLNAWKQN 360
Query: 178 LTTSDNLLISIQE 190
L N L+S+ +
Sbjct: 361 LNKVKNSLLSLSD 373
>sp|Q7L2H7|EIF3M_HUMAN Eukaryotic translation initiation factor 3 subunit M OS=Homo
sapiens GN=EIF3M PE=1 SV=1
Length = 374
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 84/193 (43%), Gaps = 15/193 (7%)
Query: 8 AELIDHFVKQASNQKGAALGSVIVEATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLR 67
EL+ + + ++Q IV A P+ F F +L + + EG D+L
Sbjct: 186 VELLGSYTEDNASQARVDAHRCIVRALKDPNAFLFDHLLTLKPVKFLEG---ELIHDLLT 242
Query: 68 LFAHGTWSDY-------KNNAGHLPQLVPDQVLKLKQLTVLTLAETNKVLPYDELMEELD 120
+F + Y K+ L L + K++ LT + +A NK + +D + +EL
Sbjct: 243 IFVSAKLASYVKFYQNNKDFIDSLGLLHEQNMAKMRLLTFMGMAVENKEISFDTMQQELQ 302
Query: 121 VTNVRELEDFLINECMYTGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGSMIQTLSNW--- 177
+ ++E F+I+ + T +V K+DQ +R V + R Q + TL+ W
Sbjct: 303 I-GADDVEAFVID-AVRTKMVYCKIDQTQRKVVVSHSTHRTFGKQQWQQLYDTLNAWKQN 360
Query: 178 LTTSDNLLISIQE 190
L N L+S+ +
Sbjct: 361 LNKVKNSLLSLSD 373
>sp|Q3T148|EIF3M_BOVIN Eukaryotic translation initiation factor 3 subunit M OS=Bos taurus
GN=EIF3M PE=2 SV=2
Length = 373
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 85/192 (44%), Gaps = 14/192 (7%)
Query: 8 AELIDHFVKQASNQKGAALGSVIVEATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLR 67
EL+ + + ++Q IV A P+ F F +L + + EG D+L
Sbjct: 186 VELLGSYTEDNASQARVDAHRCIVRALKDPNAFLFDHLLTLKPVKFLEG---ELIHDLLT 242
Query: 68 LFAHGTWSD---YKNNAGHLPQLV---PDQVLKLKQLTVLTLAETNKVLPYDELMEELDV 121
+F + Y+NN + L + K++ LT + +A NK + +D + +EL +
Sbjct: 243 IFVSAKLAYVKFYQNNKDFIDSLGLLHEQNMAKMRLLTFMGMAVENKEISFDTMQQELQI 302
Query: 122 TNVRELEDFLINECMYTGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGSMIQTLSNW---L 178
++E F+I+ + T +V K+DQ +R V + R Q + TL+ W L
Sbjct: 303 -GADDVEAFVID-AVRTKMVYCKIDQTQRKVVVSHSTHRTFGKQQWQQLYDTLNAWKQNL 360
Query: 179 TTSDNLLISIQE 190
N L+S+ +
Sbjct: 361 NKVKNSLLSLSD 372
>sp|Q292F0|EIF3M_DROPS Eukaryotic translation initiation factor 3 subunit M OS=Drosophila
pseudoobscura pseudoobscura GN=Tango7 PE=3 SV=1
Length = 387
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 67/155 (43%), Gaps = 12/155 (7%)
Query: 30 IVEATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLRLFAHGTWSDYKNNAGHLPQLVP 89
IV A + P+ F +LA+ + EG D+L +F Y + V
Sbjct: 209 IVTALADPNTFLLDPLLALKPVRFLEG---DLIHDLLSIFVSDKLPSYVQFYEDHKEFVN 265
Query: 90 DQVL-------KLKQLTVLTLAETNKVLPYDELMEELDVTNVRELEDFLINECMYTGIVR 142
Q L K++ LT + LAE+N + +D L +EL +T E+E F+I + + T +VR
Sbjct: 266 SQGLNHEQNMKKMRLLTFMQLAESNPEMTFDTLTKELQITE-DEVEPFVI-QVLKTKLVR 323
Query: 143 GKLDQLRRCFEVQFAAGRDLRPGQLGSMIQTLSNW 177
+LDQ R + R Q + L W
Sbjct: 324 ARLDQANRKVHISSTMHRTFGAPQWEQLRDLLQAW 358
>sp|B4GDM5|EIF3M_DROPE Eukaryotic translation initiation factor 3 subunit M OS=Drosophila
persimilis GN=Tango7 PE=3 SV=1
Length = 387
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 67/155 (43%), Gaps = 12/155 (7%)
Query: 30 IVEATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLRLFAHGTWSDYKNNAGHLPQLVP 89
IV A + P+ F +LA+ + EG D+L +F Y + V
Sbjct: 209 IVTALADPNTFLLDPLLALKPVRFLEG---DLIHDLLSIFVSDKLPSYVQFYEDHKEFVN 265
Query: 90 DQVL-------KLKQLTVLTLAETNKVLPYDELMEELDVTNVRELEDFLINECMYTGIVR 142
Q L K++ LT + LAE+N + +D L +EL +T E+E F+I + + T +VR
Sbjct: 266 SQGLNHEQNMKKMRLLTFMQLAESNPEMTFDTLTKELQITE-DEVEPFVI-QVLKTKLVR 323
Query: 143 GKLDQLRRCFEVQFAAGRDLRPGQLGSMIQTLSNW 177
+LDQ R + R Q + L W
Sbjct: 324 ARLDQANRKVHISSTMHRTFGAPQWEQLRDLLQAW 358
>sp|Q6DK91|EIF3M_XENTR Eukaryotic translation initiation factor 3 subunit M OS=Xenopus
tropicalis GN=eif3m PE=2 SV=1
Length = 374
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 82/193 (42%), Gaps = 15/193 (7%)
Query: 8 AELIDHFVKQASNQKGAALGSVIVEATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLR 67
EL+ + ++Q IV A P F +LA+ + EG D+L
Sbjct: 186 VELLGSYTDDNASQARLDAHKCIVRALKDPKAFLLDHLLALKPVKFLEG---ELIHDLLT 242
Query: 68 LFAHGTWSDY----KNNAGHLPQLV---PDQVLKLKQLTVLTLAETNKVLPYDELMEELD 120
+F S Y +NN + L + K++ LT + +A NK + +D + +EL
Sbjct: 243 IFVSAKLSSYVKFYQNNKDFIDSLGLSHEQNMEKMRLLTFMGMAVDNKEISFDTIQQELQ 302
Query: 121 VTNVRELEDFLINECMYTGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGSMIQTLSNW--- 177
+ E+E F+I+ + T +V K+DQ ++ V + R Q + TL+ W
Sbjct: 303 I-GADEVEAFIID-AVKTKMVYCKIDQTQKRVVVSHSTHRTFGKQQWQQLYDTLNTWKQN 360
Query: 178 LTTSDNLLISIQE 190
L N L SI +
Sbjct: 361 LNKVKNSLYSISD 373
>sp|P84169|PSD13_CHICK 26S proteasome non-ATPase regulatory subunit 13 OS=Gallus gallus
GN=PSMD13 PE=1 SV=1
Length = 376
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 71/151 (47%), Gaps = 12/151 (7%)
Query: 39 LFAFSEILAVPNIAEFEGTENSKYLDMLRLFAHG---TWSDYKNNAGHLPQLVPDQVLKL 95
++ F E+L P + T+ +D L F G T+ K+ G P L ++ L L
Sbjct: 210 VYNFGELLMHPVLESLRSTDRQWLIDTLYAFNSGNVETFQALKSAWGQQPDLAANEALLL 269
Query: 96 KQLTVLTLAE-------TNKVLPYDELMEELDVTNVRELEDFLINECMYTGIVRGKLDQL 148
+++ +L L E ++ L ++E+ + VT V E+E L+ + + G+V+G +D++
Sbjct: 270 QKIQLLCLMEMTFTRPANHRQLTFEEIAKSAKVT-VNEVE-LLVMKALSVGLVKGSIDEV 327
Query: 149 RRCFEVQFAAGRDLRPGQLGSMIQTLSNWLT 179
+ + + R L Q+ M L W T
Sbjct: 328 DKRVHMTWVQPRVLDLQQIKGMKDRLEFWCT 358
>sp|B4MY75|EIF3M_DROWI Eukaryotic translation initiation factor 3 subunit M OS=Drosophila
willistoni GN=Tango7 PE=3 SV=1
Length = 387
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 67/155 (43%), Gaps = 12/155 (7%)
Query: 30 IVEATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLRLFAHGTWSDYKNNAGHLPQLVP 89
IV A + P+ F +L++ + EG D+L +F Y + V
Sbjct: 209 IVTALADPNTFLLDPLLSLKPVRFLEG---DLIHDLLSIFVSEKLPAYVEFYEEHKEFVN 265
Query: 90 DQVL-------KLKQLTVLTLAETNKVLPYDELMEELDVTNVRELEDFLINECMYTGIVR 142
Q L K++ LT + LAE+N + ++ L +EL +T E+E F+I E + T +VR
Sbjct: 266 SQGLNHEQNMKKMRLLTFMQLAESNAEMSFEALTKELQITE-NEVEPFVI-EVLKTKLVR 323
Query: 143 GKLDQLRRCFEVQFAAGRDLRPGQLGSMIQTLSNW 177
+LDQ R + R Q + L W
Sbjct: 324 ARLDQANRKVHISSTMHRTFGAPQWEQLRDLLQAW 358
>sp|B3MCZ5|EIF3M_DROAN Eukaryotic translation initiation factor 3 subunit M OS=Drosophila
ananassae GN=Tango7 PE=3 SV=1
Length = 387
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 67/155 (43%), Gaps = 12/155 (7%)
Query: 30 IVEATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLRLFAHGTWSDYKNNAGHLPQLVP 89
IV A + P+ F +L++ + EG D+L +F Y + V
Sbjct: 209 IVTALADPNTFLLDPLLSLKPVRFLEG---DLIHDLLSIFVSDKLPSYVQFYEDHKEFVN 265
Query: 90 DQVL-------KLKQLTVLTLAETNKVLPYDELMEELDVTNVRELEDFLINECMYTGIVR 142
Q L K++ LT + LAE++ + +D L +EL +T E+E F+I E + T +VR
Sbjct: 266 SQGLNHEQNMKKMRLLTFMQLAESSPEMTFDTLTKELQITE-DEVEPFVI-EVLKTKLVR 323
Query: 143 GKLDQLRRCFEVQFAAGRDLRPGQLGSMIQTLSNW 177
+LDQ R + R Q + L W
Sbjct: 324 ARLDQANRKVHISSTMHRTFGAPQWEQLRDLLQAW 358
>sp|Q54KZ8|EIF3M_DICDI Eukaryotic translation initiation factor 3 subunit M
OS=Dictyostelium discoideum GN=eif3m PE=1 SV=1
Length = 401
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 79/182 (43%), Gaps = 12/182 (6%)
Query: 14 FVKQASNQKGAALGSVIVEATSQPSLFAFSEILAVPNIAEFEGTE---NSKYLDMLRLFA 70
F K+ S + V +E+ S L+ +L +P + EG+ NS +++++FA
Sbjct: 203 FTKEDSQEAQEDAVRVCIESISLQELYQSDYLLDLPAVQYLEGSTVSANSLTYELMKIFA 262
Query: 71 HGTWSDYKNNAGHLPQLVP-------DQVLKLKQLTVLTLAETNKVLPYDELMEELDVTN 123
+ P + D + K++ L++ TL +PY + + L + +
Sbjct: 263 TEQLDSFLQFQQKNPNFLSTIGLSNDDCLQKIRLLSLATLTSEQSKVPYSLISKMLQI-D 321
Query: 124 VRELEDFLINECMYTGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGSMIQTLSNWLTTSDN 183
E+E ++IN M ++ KLDQL R V + R Q + Q S W ++ N
Sbjct: 322 ENEVEMWVIN-AMEGDLLDAKLDQLNRIVNVNSSTQRVFNKSQWSQLGQRFSVWKSSVKN 380
Query: 184 LL 185
LL
Sbjct: 381 LL 382
>sp|A8WQY8|EIF3M_CAEBR COP9/Signalosome and eIF3 complex-shared subunit 1
OS=Caenorhabditis briggsae GN=cif-1 PE=3 SV=1
Length = 390
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 74/165 (44%), Gaps = 25/165 (15%)
Query: 7 QAELIDHFVKQASNQKGAALGS---------------VIVEATSQPSLFAFSEILAVPNI 51
+A L+D QA+ A LG+ + A P F+F + + +
Sbjct: 178 RALLVDQRADQAAKVMTALLGTYTEKDAATARDDAMECVRTAVVDPKSFSFDHLERLSAV 237
Query: 52 AEFEGTENSKYLDMLRLFAHGTWSDYKNNAGHLPQLVPD-----QVLKLKQ---LTVLTL 103
+ ++ + L LF GT DY+ P+ V D +V+ LK+ LT+++L
Sbjct: 238 KALKSSDPLMF-TALELFISGTLKDYQQFVAKNPKFVTDYLKVDEVILLKKIRLLTLMSL 296
Query: 104 AETNKVLPYDELMEELDVTNVRELEDFLINECMYTGIVRGKLDQL 148
AE + DEL ++LD+ LE+F+I+ I GK++++
Sbjct: 297 AEEKNEIKLDELAKQLDIHADETLEEFVIDAIQVNAI-SGKINEM 340
>sp|A1CD85|EIF3M_ASPCL Eukaryotic translation initiation factor 3 subunit M OS=Aspergillus
clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC
3887 / NRRL 1) GN=ACLA_005680 PE=3 SV=1
Length = 471
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 88/202 (43%), Gaps = 24/202 (11%)
Query: 29 VIVEATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLRLFAHGTWSDYKNNAGHLP-QL 87
+ A P++F F+ + A I T +S ++L +F T Y++ P
Sbjct: 238 ALASALKSPAVFDFTSLTAADAIQALR-TSDSSLFELLEIFTADTLDAYEDFVAATPLAS 296
Query: 88 VPDQVL---------KLKQLTVLTLAET--NKVLPYDELMEELDVTNVRELEDFLINECM 136
+ VL KL+ LT+ ++A + ++ LPY + L V ++E ++I+ +
Sbjct: 297 ISGGVLADAGEALQNKLRLLTLASIAASAPSRSLPYATIASALRVPT-EDVEKWVID-TI 354
Query: 137 YTGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGSMIQTLSNWLTTSDNLLISIQEKIKWAD 196
G+V GKL QLR F V A R Q + L W + +N+L ++
Sbjct: 355 RAGLVEGKLSQLRSEFLVHRATYRVFGEKQWAEVQGRLMVWRRSLENVLGVVR------- 407
Query: 197 SMNEMDKKHRKDLEEKVEEAKK 218
E ++ R+ L+ EEA +
Sbjct: 408 --AERERFIRESLQAATEEANQ 427
>sp|B4KT65|EIF3M_DROMO Eukaryotic translation initiation factor 3 subunit M OS=Drosophila
mojavensis GN=Tango7 PE=3 SV=1
Length = 387
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 66/155 (42%), Gaps = 12/155 (7%)
Query: 30 IVEATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLRLFAHGTWSDYKNNAGHLPQLVP 89
IV A + P+ F +L++ + EG D+L +F Y + V
Sbjct: 209 IVTALADPNTFLLDPLLSLKPVRFLEG---DLIHDLLSIFVSDKLPSYVQFYEDHKEFVN 265
Query: 90 DQVL-------KLKQLTVLTLAETNKVLPYDELMEELDVTNVRELEDFLINECMYTGIVR 142
Q L K++ LT + LAE+ + +D L +EL + N E+E F+I E + T +VR
Sbjct: 266 SQGLNHEQNMKKMRLLTFMQLAESYPEMTFDTLTKELQI-NEDEVEPFVI-EVLKTKLVR 323
Query: 143 GKLDQLRRCFEVQFAAGRDLRPGQLGSMIQTLSNW 177
+LDQ R + R Q + L W
Sbjct: 324 ARLDQANRKVHISSTMHRTFGAPQWEQLRDLLQAW 358
>sp|B4JW83|EIF3M_DROGR Eukaryotic translation initiation factor 3 subunit M OS=Drosophila
grimshawi GN=Tango7 PE=3 SV=1
Length = 387
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 66/155 (42%), Gaps = 12/155 (7%)
Query: 30 IVEATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLRLFAHGTWSDYKNNAGHLPQLVP 89
IV A + P+ F +L++ + EG D+L +F Y + V
Sbjct: 209 IVTALADPNTFLLDPLLSLKPVRFLEG---DLIHDLLSIFVSDKLPSYVQFYEDHKEFVN 265
Query: 90 DQVL-------KLKQLTVLTLAETNKVLPYDELMEELDVTNVRELEDFLINECMYTGIVR 142
Q L K++ LT + LAE+ + +D L +EL + N E+E F+I E + T +VR
Sbjct: 266 SQGLNHDQNMKKMRLLTFMQLAESYPEMSFDTLTKELQI-NDDEVEPFVI-EVLKTKLVR 323
Query: 143 GKLDQLRRCFEVQFAAGRDLRPGQLGSMIQTLSNW 177
+LDQ R + R Q + L W
Sbjct: 324 ARLDQANRKVHISSTMHRTFGAPQWEQLRDLLQAW 358
>sp|Q09722|EIF3M_SCHPO Eukaryotic translation initiation factor 3 subunit M
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=eif3m PE=1 SV=2
Length = 402
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 87/185 (47%), Gaps = 16/185 (8%)
Query: 2 DIEQRQAELIDHFVKQASNQKGAALGSVIVEATSQPSLFAFSEILAVPNIAEFEGTENSK 61
D EQ A L++ VK ++ A+ ++ A + P F F +I+ +P + + E +
Sbjct: 188 DDEQSFAFLLEA-VKMDNSTADEAVRELVQRAVNSPKYFFFDDIVTLPPVQQLEQST--- 243
Query: 62 YLDMLRLFAHGTWSDY----KNNAGHLPQLVPDQ---VLKLKQLTVLTLA--ETNKVLPY 112
L +L + + G DY N H D+ K+K LT+ +LA N L Y
Sbjct: 244 -LQLLGILSGGMTDDYVSWVAENHAHCQHQKFDEDAIARKMKLLTIASLATQAPNNTLSY 302
Query: 113 DELMEELDVTNVRELEDFLINECMYTGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGSMIQ 172
++ + L + + E+E ++I + + G+V G++ QL + + ++ R + ++ +
Sbjct: 303 GDVAKSLKI-DENEVELWII-DVIRAGLVEGRMSQLTKTLSIHRSSYRVFGKHEWVALHE 360
Query: 173 TLSNW 177
L+ W
Sbjct: 361 KLAKW 365
>sp|Q5DHT6|EIF3M_SCHJA Eukaryotic translation initiation factor 3 subunit M OS=Schistosoma
japonicum GN=SJCHGC06559 PE=2 SV=1
Length = 384
Score = 44.3 bits (103), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 71/167 (42%), Gaps = 13/167 (7%)
Query: 18 ASNQKGAALGSVIVEATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLRLFAHGTWSDY 77
A N + A+ I+ P L + ++ A+ + EG D ++F G + +
Sbjct: 204 AVNARQNAI-KCIISVLQDPCLLSHDQLYALKPVQYLEG---EPVHDFFKIFVSGDLNTF 259
Query: 78 KNNAGHLPQLVPDQ-------VLKLKQLTVLTLAETNKVLPYDELMEELDVTNVRELEDF 130
KN P + V KL+ LT++ L+E L Y E +L + + ELE F
Sbjct: 260 KNFLAKHPNFLSHNNLSEEACVHKLRLLTLMQLSENVNELSYHEAATQLGL-KIEELEPF 318
Query: 131 LINECMYTGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGSMIQTLSNW 177
+I E + V KLDQ+++ + A R Q ++ TL W
Sbjct: 319 II-EAVRQRAVACKLDQVQKKILITGAFPRTFGRPQWINLHDTLVQW 364
>sp|Q4WG69|EIF3M_ASPFU Eukaryotic translation initiation factor 3 subunit M OS=Neosartorya
fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 /
FGSC A1100) GN=AFUA_7G03980 PE=3 SV=1
Length = 468
Score = 43.9 bits (102), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 15/144 (10%)
Query: 29 VIVEATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLRLFAHGTWSDYKNNAGHLP-QL 87
+ A P++F F+ + A I + +S ++L +F T Y++ P +
Sbjct: 238 ALTSALKSPAVFDFTSLTAADAIQALRSS-DSTLFELLEIFTADTLDAYEDFIAATPLET 296
Query: 88 VPDQVL---------KLKQLTVLTLAET--NKVLPYDELMEELDVTNVRELEDFLINECM 136
+ VL K++ LT+ +LA + ++ LPY + L V V ++E ++I+ +
Sbjct: 297 ISGGVLVDGAEALQTKMRLLTLASLAASTPSRSLPYTTIASALRVP-VEDVEKWVID-TI 354
Query: 137 YTGIVRGKLDQLRRCFEVQFAAGR 160
G+V GKL QLR F V A R
Sbjct: 355 RAGLVEGKLSQLRSEFLVHRATYR 378
>sp|B0YCA6|EIF3M_ASPFC Eukaryotic translation initiation factor 3 subunit M OS=Neosartorya
fumigata (strain CEA10 / CBS 144.89 / FGSC A1163)
GN=AFUB_089510 PE=3 SV=1
Length = 468
Score = 43.9 bits (102), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 15/144 (10%)
Query: 29 VIVEATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLRLFAHGTWSDYKNNAGHLP-QL 87
+ A P++F F+ + A I + +S ++L +F T Y++ P +
Sbjct: 238 ALTSALKSPAVFDFTSLTAADAIQALRSS-DSTLFELLEIFTADTLDAYEDFIAATPLET 296
Query: 88 VPDQVL---------KLKQLTVLTLAET--NKVLPYDELMEELDVTNVRELEDFLINECM 136
+ VL K++ LT+ +LA + ++ LPY + L V V ++E ++I+ +
Sbjct: 297 ISGGVLVDGAEALQTKMRLLTLASLAASTPSRSLPYTTIASALRVP-VEDVEKWVID-TI 354
Query: 137 YTGIVRGKLDQLRRCFEVQFAAGR 160
G+V GKL QLR F V A R
Sbjct: 355 RAGLVEGKLSQLRSEFLVHRATYR 378
>sp|Q0CPV5|EIF3M_ASPTN Eukaryotic translation initiation factor 3 subunit M OS=Aspergillus
terreus (strain NIH 2624 / FGSC A1156) GN=ATEG_04279
PE=3 SV=1
Length = 461
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 75/168 (44%), Gaps = 15/168 (8%)
Query: 30 IVEATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLRLFAHGTWSDYKNNAGHLP-QLV 88
+ A S P++F F+ + A + T +S ++L +F T Y+ P +
Sbjct: 238 LTSALSHPAVFDFTPLTASDAVQALR-TSDSTLFELLEIFTADTLDAYEAFVAATPLASI 296
Query: 89 PDQVL---------KLKQLTVLTLAET--NKVLPYDELMEELDVTNVRELEDFLINECMY 137
VL K++ LT+ +LA + ++ LPY + L V ++E ++I+ +
Sbjct: 297 SGGVLAPAADALQNKMRLLTLASLAASTPSRSLPYATIASALRVP-AEDVEKWVID-TIR 354
Query: 138 TGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGSMIQTLSNWLTTSDNLL 185
G+V GKL QLR F V A R Q + L W + +N+L
Sbjct: 355 AGLVEGKLSQLRSEFLVHRATYRVFGEKQWAEVQGRLMVWRRSLENVL 402
>sp|A1DC62|EIF3M_NEOFI Eukaryotic translation initiation factor 3 subunit M OS=Neosartorya
fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 /
NRRL 181) GN=NFIA_024940 PE=3 SV=1
Length = 468
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 15/144 (10%)
Query: 29 VIVEATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLRLFAHGTWSDYKNNAGHLP-QL 87
+ A P +F F+ + A I + +S ++L +F T Y++ P +
Sbjct: 238 ALTSALKSPGVFDFTSLTAADAIQALRSS-DSTLFELLEIFTADTLDAYEDFIAATPLET 296
Query: 88 VPDQVL---------KLKQLTVLTLAET--NKVLPYDELMEELDVTNVRELEDFLINECM 136
+ VL K++ LT+ +LA + ++ LPY + L V V ++E ++I+ +
Sbjct: 297 ISGGVLADGAEALQTKMRLLTLASLAASTPSRSLPYATIASALRVP-VEDVEKWVID-TI 354
Query: 137 YTGIVRGKLDQLRRCFEVQFAAGR 160
G+V GKL QLR F V A R
Sbjct: 355 RAGLVEGKLSQLRSEFLVHRATYR 378
>sp|Q9UNM6|PSD13_HUMAN 26S proteasome non-ATPase regulatory subunit 13 OS=Homo sapiens
GN=PSMD13 PE=1 SV=2
Length = 376
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 68/151 (45%), Gaps = 12/151 (7%)
Query: 39 LFAFSEILAVPNIAEFEGTENSKYLDMLRLFAHGT---WSDYKNNAGHLPQLVPDQVLKL 95
+F F E+L P + T+ +D L F G + K G P L ++ L
Sbjct: 210 VFNFGELLMHPVLESLRNTDRQWLIDTLYAFNSGNVERFQTLKTAWGQQPDLAANEAQLL 269
Query: 96 KQLTVLTLAE-------TNKVLPYDELMEELDVTNVRELEDFLINECMYTGIVRGKLDQL 148
+++ +L L E ++ L ++E+ + +T V E+E L+ + + G+V+G +D++
Sbjct: 270 RKIQLLCLMEMTFTRPANHRQLTFEEIAKSAKIT-VNEVE-LLVMKALSVGLVKGSIDEV 327
Query: 149 RRCFEVQFAAGRDLRPGQLGSMIQTLSNWLT 179
+ + + R L Q+ M L W T
Sbjct: 328 DKRVHMTWVQPRVLDLQQIKGMKDRLEFWCT 358
>sp|Q7Q068|EIF3M_ANOGA Eukaryotic translation initiation factor 3 subunit M OS=Anopheles
gambiae GN=AGAP012281 PE=3 SV=2
Length = 385
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 68/155 (43%), Gaps = 12/155 (7%)
Query: 30 IVEATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLRLFAHGTWSDYKNNAGHLPQLVP 89
IV A + P+ F +L++ + EG D+L +F Y + + V
Sbjct: 211 IVTALADPNTFLLDPLLSLKPVRFLEG---ELIHDLLSVFVSEKLPSYLEFYKNHKEFVN 267
Query: 90 DQVL-------KLKQLTVLTLAETNKVLPYDELMEELDVTNVRELEDFLINECMYTGIVR 142
Q L K++ L+ + LAE+N + + +L +EL + E+E F+I E + T +VR
Sbjct: 268 SQGLNHEQNIKKMRLLSFMQLAESNSEMTFQQLQDELQIKE-EEVEPFII-EVLKTKLVR 325
Query: 143 GKLDQLRRCFEVQFAAGRDLRPGQLGSMIQTLSNW 177
++DQ R + R Q + L +W
Sbjct: 326 ARMDQRARKVHISSTMHRTFGRPQWQQLRDLLLSW 360
>sp|B0BN93|PSD13_RAT 26S proteasome non-ATPase regulatory subunit 13 OS=Rattus
norvegicus GN=Psmd13 PE=1 SV=1
Length = 376
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 69/151 (45%), Gaps = 12/151 (7%)
Query: 39 LFAFSEILAVPNIAEFEGTENSKYLDMLRLFAHG---TWSDYKNNAGHLPQLVPDQVLKL 95
+F F E+L P + T+ +D L F G + K+ G P L ++ L
Sbjct: 210 VFNFGELLMHPVLESLRNTDRQWLIDTLYAFNSGDVDRFQTLKSAWGQQPDLAANEAQLL 269
Query: 96 KQLTVLTLAE-------TNKVLPYDELMEELDVTNVRELEDFLINECMYTGIVRGKLDQL 148
+++ +L L E ++ L ++E+ + +T V ++E L+ + + G+VRG +D++
Sbjct: 270 RKIQLLCLMEMTFTRPANHRQLTFEEIAKSAKIT-VNKVE-LLVMKALSVGLVRGSIDEV 327
Query: 149 RRCFEVQFAAGRDLRPGQLGSMIQTLSNWLT 179
+ + + R L Q+ M L W T
Sbjct: 328 DKRVHMTWVQPRVLDLQQIKGMKDRLELWCT 358
>sp|B4LJT9|EIF3M_DROVI Eukaryotic translation initiation factor 3 subunit M OS=Drosophila
virilis GN=Tango7 PE=3 SV=1
Length = 387
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 65/155 (41%), Gaps = 12/155 (7%)
Query: 30 IVEATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLRLFAHGTWSDYKNNAGHLPQLVP 89
IV A + P+ F +L++ + EG D+L +F Y + V
Sbjct: 209 IVTALADPNTFLLDPLLSLKPVRFLEG---DLIHDLLSIFVSDKLPSYVQFYEDHKEFVN 265
Query: 90 DQVL-------KLKQLTVLTLAETNKVLPYDELMEELDVTNVRELEDFLINECMYTGIVR 142
Q L K++ LT + LAE+ + +D L +EL + E+E F+I E + T +VR
Sbjct: 266 SQGLNHEQNMKKMRLLTFMQLAESYPEMTFDTLTKELQIGE-DEVEPFVI-EVLKTKLVR 323
Query: 143 GKLDQLRRCFEVQFAAGRDLRPGQLGSMIQTLSNW 177
+LDQ R + R Q + L W
Sbjct: 324 ARLDQANRKVHISSTMHRTFGAPQWEQLRDLLQAW 358
>sp|Q5E964|PSD13_BOVIN 26S proteasome non-ATPase regulatory subunit 13 OS=Bos taurus
GN=PSMD13 PE=2 SV=1
Length = 376
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 67/151 (44%), Gaps = 12/151 (7%)
Query: 39 LFAFSEILAVPNIAEFEGTENSKYLDMLRLFAHGT---WSDYKNNAGHLPQLVPDQVLKL 95
+F F E+L P + T+ +D L F G + K G P L ++ L
Sbjct: 210 VFNFGELLMHPVLESLRDTDRQWLIDTLYAFNSGNVERFQTLKTAWGQQPDLAANEAQLL 269
Query: 96 KQLTVLTLAE-------TNKVLPYDELMEELDVTNVRELEDFLINECMYTGIVRGKLDQL 148
+++ +L L E ++ L ++E+ +T V E+E L+ + + G+V+G +D++
Sbjct: 270 RKIQLLCLMEMTFTRPANHRQLTFEEIARSAKIT-VNEVE-LLVMKALSVGLVKGSIDEV 327
Query: 149 RRCFEVQFAAGRDLRPGQLGSMIQTLSNWLT 179
+ + + R L Q+ M L W T
Sbjct: 328 DKRVHMTWVQPRVLDLQQIKGMKDRLEFWCT 358
>sp|Q17D30|EIF3M_AEDAE Eukaryotic translation initiation factor 3 subunit M OS=Aedes
aegypti GN=AAEL004347 PE=3 SV=1
Length = 386
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 67/155 (43%), Gaps = 12/155 (7%)
Query: 30 IVEATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLRLFAHGTWSDYKNNAGHLPQLVP 89
IV A + P+ F +L++ + EG D+L +F Y + + V
Sbjct: 212 IVTALADPNTFLLDPLLSLKPVRFLEG---ELIHDLLSVFVSEKLPSYLQFYKNHKEFVN 268
Query: 90 DQVL-------KLKQLTVLTLAETNKVLPYDELMEELDVTNVRELEDFLINECMYTGIVR 142
Q L K++ L+ + LAE+N + + +L +EL + E+E F+I E + T +VR
Sbjct: 269 SQGLNHEQNIKKMRLLSFMQLAESNPEMTFQQLQDELQIGE-NEVEPFII-EVLKTKLVR 326
Query: 143 GKLDQLRRCFEVQFAAGRDLRPGQLGSMIQTLSNW 177
++DQ R + R Q + L W
Sbjct: 327 ARMDQKARKVHISSTMHRTFGRPQWQQLRDLLHAW 361
>sp|Q7T3B0|EIF3M_DANRE Eukaryotic translation initiation factor 3 subunit M OS=Danio rerio
GN=eif3m PE=2 SV=2
Length = 375
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 77/177 (43%), Gaps = 12/177 (6%)
Query: 8 AELIDHFVKQASNQKGAALGSVIVEATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLR 67
EL+ + + ++Q IV A P+ + F +LA+ + EG D+L
Sbjct: 186 VELLGSYTEDNASQARVDAHRCIVRALKDPNTYLFDHLLALKPVRFLEG---ELIHDLLT 242
Query: 68 LFAHGTWSDY----KNNAGHLPQLV---PDQVLKLKQLTVLTLAETNKVLPYDELMEELD 120
+F Y ++N + L + K++ LT + +A K + ++ + +EL
Sbjct: 243 IFVSAKLISYVKFYQSNKDFIESLGLSHEQNMSKMRLLTFMGMAVEMKEISFETMQQELQ 302
Query: 121 VTNVRELEDFLINECMYTGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGSMIQTLSNW 177
+ ++E F+I+ + T +V K+DQ +R V + R Q + TL +W
Sbjct: 303 I-GAEDVEAFVID-AVRTKMVYSKIDQTQRKVVVSHSTHRTFGKQQWQQLYDTLCSW 357
>sp|Q1DQB2|EIF3M_COCIM Eukaryotic translation initiation factor 3 subunit M
OS=Coccidioides immitis (strain RS) GN=CIMG_07501 PE=3
SV=1
Length = 465
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 77/178 (43%), Gaps = 13/178 (7%)
Query: 18 ASNQKGAALGSVIVEATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLRLFAHGTWSDY 77
+SN+ ++ A + P +F F+ + + I E S + ++L +FA T Y
Sbjct: 235 SSNEARELAVRALISALTYPFVFDFTPLTSSDAIQNLRSAEPSLF-ELLEIFASDTLDAY 293
Query: 78 KNNAGHLP-----QLVPDQVLKLKQLTVLTLAE-----TNKVLPYDELMEELDVTNVREL 127
+ P L + ++ VLTLA ++ LPYD + L + ++
Sbjct: 294 EEFIKSTPLSSMHNLAESAEILQNKMRVLTLASLAASTPSRSLPYDSISNALRIPR-EDV 352
Query: 128 EDFLINECMYTGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGSMIQTLSNWLTTSDNLL 185
E ++I+ + G+V GKL QL+ F V A R Q + L W + +N+L
Sbjct: 353 EKWVID-TIRAGLVEGKLSQLKGEFLVHRATYRVFGERQWAEVQGRLMVWRRSLENVL 409
>sp|Q9WVJ2|PSD13_MOUSE 26S proteasome non-ATPase regulatory subunit 13 OS=Mus musculus
GN=Psmd13 PE=1 SV=1
Length = 376
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 68/151 (45%), Gaps = 12/151 (7%)
Query: 39 LFAFSEILAVPNIAEFEGTENSKYLDMLRLFAHGT---WSDYKNNAGHLPQLVPDQVLKL 95
+F F E+L P + T+ +D L F G + K G P L ++ L
Sbjct: 210 VFNFGELLMHPVLESLRDTDRQWLIDTLYAFNSGAVDRFQTLKCAWGQQPDLAANEAQLL 269
Query: 96 KQLTVLTLAE-------TNKVLPYDELMEELDVTNVRELEDFLINECMYTGIVRGKLDQL 148
+++ +L L E ++ L ++E+ + +T V ++E L+ + + G+VRG +D++
Sbjct: 270 RKIQLLCLMEMTFTRPANHRQLTFEEIAKSAKIT-VNKVE-LLVMKALSVGLVRGSIDEV 327
Query: 149 RRCFEVQFAAGRDLRPGQLGSMIQTLSNWLT 179
+ + + R L Q+ M L W T
Sbjct: 328 DKRVHMTWVQPRVLDLQQIKGMKDRLELWCT 358
>sp|Q2UDZ9|EIF3M_ASPOR Eukaryotic translation initiation factor 3 subunit M OS=Aspergillus
oryzae (strain ATCC 42149 / RIB 40) GN=AO090026000816
PE=3 SV=1
Length = 466
Score = 41.6 bits (96), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 84/182 (46%), Gaps = 16/182 (8%)
Query: 17 QASNQKGAALG-SVIVEATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLRLFAHGTWS 75
QAS+++ L + A + P++F F+ + A + ++++ + ++L +F T
Sbjct: 226 QASSKEARDLAIRALTSALTHPAVFDFTPLTASDAVQALRSSDSTLF-ELLEIFTADTLD 284
Query: 76 DYKNNAGHLPQL-VPDQVL---------KLKQLTVLTLAET--NKVLPYDELMEELDVTN 123
Y+ P + VL K++ LT+ +LA + ++ LPY + L V
Sbjct: 285 AYEAFVTATPLAGISGGVLADAGEALQNKMRLLTLASLAASTPSRSLPYATIAASLRVP- 343
Query: 124 VRELEDFLINECMYTGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGSMIQTLSNWLTTSDN 183
++E ++I+ + G+V GKL QLR F V A R Q + L W + +N
Sbjct: 344 AEDVEKWVID-TIRAGLVEGKLSQLRSEFLVHRATYRVFGEKQWAEVQGRLMVWRRSLEN 402
Query: 184 LL 185
+L
Sbjct: 403 VL 404
>sp|Q0UXJ7|EIF3M_PHANO Eukaryotic translation initiation factor 3 subunit M
OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 /
FGSC 10173) GN=SNOG_03517 PE=3 SV=2
Length = 441
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 88/197 (44%), Gaps = 26/197 (13%)
Query: 33 ATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLRLFAHGTWSDYKNNAGHLPQLVPDQV 92
A + P+ F F ++ + +I + + + +L +F DY + V +
Sbjct: 232 ALTHPTHFDFQDLTDLDSIQALRNS-DPIFFQLLEIFNSDLLDDYNDFKDEHDGWVEESG 290
Query: 93 L-------KLKQLTVLTLAET---NKVLPYDELMEELDVTNVRELEDFLINECMYTGIVR 142
L K++ LT+ ++A + + LPYD++ + L +++ E+E ++I+ + G+V
Sbjct: 291 LDGAALNRKMRLLTLASMAASAGQTRSLPYDKIAKALQISS-EEVEMWVID-VIRAGLVE 348
Query: 143 GKLDQLRRCFEVQFAAGRDLRPGQLGSMIQTLSNWLTTSDNLLISIQEKIKWADSMNEMD 202
GKL QL + F + + R Q + L W + +L IQ
Sbjct: 349 GKLSQLNQTFLIHRSTYRVFGDNQWREVSSRLDMWRNSLTGVLQVIQ------------- 395
Query: 203 KKHRKDLEEKVEEAKKS 219
+ ++ L+EK EEA K+
Sbjct: 396 AEKQRFLQEKEEEANKA 412
>sp|B0WTN3|EIF3M_CULQU Eukaryotic translation initiation factor 3 subunit M OS=Culex
quinquefasciatus GN=CPIJ010525 PE=3 SV=1
Length = 386
Score = 40.0 bits (92), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 80/183 (43%), Gaps = 17/183 (9%)
Query: 30 IVEATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLRLFAHGTWSDYKNNAGHLPQLVP 89
IV A + P+ F +L++ + EG D+L +F Y + + V
Sbjct: 212 IVTALADPNTFLLDPLLSLKPVRFLEG---ELIHDLLSVFVSEKLPAYLQFYQNHKEFVN 268
Query: 90 DQVL-------KLKQLTVLTLAETNKVLPYDELMEELDVTNVRELEDFLINECMYTGIVR 142
Q L K++ L+ + LAE+N + + +L +EL + ++E F+I E + T +VR
Sbjct: 269 SQGLNHEQNIKKMRLLSFMQLAESNPEMTFAQLQDELQIGE-NDVEPFII-EVLKTKLVR 326
Query: 143 GKLDQLRRCFEVQFAAGRDLRPGQLGSMIQTLSNWLTTSDNLLISIQEKIK-WADSMNEM 201
++DQ R + R Q + L W L +QE +K A++ E+
Sbjct: 327 ARMDQKARKVHISSTMHRTFGRPQWQQLRDLLHAWKAN----LTLVQENMKSVAEAQIEL 382
Query: 202 DKK 204
+K
Sbjct: 383 TRK 385
>sp|Q5B5C1|EIF3M_EMENI Eukaryotic translation initiation factor 3 subunit M OS=Emericella
nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 /
NRRL 194 / M139) GN=AN4259 PE=3 SV=1
Length = 459
Score = 35.0 bits (79), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 72/176 (40%), Gaps = 22/176 (12%)
Query: 29 VIVEATSQPSLFAFSEILAVPNIAEFEGTENSKYLDMLRLFAHGTWSDYKN--NAGHLPQ 86
+ A + P++F F+ + A + + ++ ++L +F T Y++ +A +
Sbjct: 238 ALTSALTHPAVFDFTPLTAADAVQALRSS-DAPLFELLEIFTADTLDAYEDFISATPVEN 296
Query: 87 LVPDQVLKLKQLTVLT-----------------LAETNKVLPYDELMEELDVTNVRELED 129
++PD L + T + + L Y+ + L V E+E
Sbjct: 297 ILPDNALAPHAEALQTKIRLLTLASLAAAATTTTGPSARSLSYETIASALRVPQ-EEVEK 355
Query: 130 FLINECMYTGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGSMIQTLSNWLTTSDNLL 185
++I+ + G+V GKL QLR F V A R Q + L W + +N+L
Sbjct: 356 WVID-TIRAGLVEGKLSQLRSEFLVHRATYRVFGEKQWAEVQGRLMVWRRSLENVL 410
>sp|Q6MDM0|RPOC_PARUW DNA-directed RNA polymerase subunit beta' OS=Protochlamydia
amoebophila (strain UWE25) GN=rpoC PE=3 SV=1
Length = 1388
Score = 33.9 bits (76), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 48/93 (51%), Gaps = 11/93 (11%)
Query: 43 SEILAVPNIAEFEGTENSKYLDMLRLFAHGTWSDY-KNNAGHLPQLVPDQVLKLKQLTVL 101
+EI + + +F G + +K + ++R G ++ ++ HL D V+K +QLT
Sbjct: 1155 AEIAKIDGVVDFRGVQKNKRIVVVRDEMTGMEEEHLISHTKHLIIQRGDHVVKGQQLT-- 1212
Query: 102 TLAETNKVLPYDELMEELDVTNVRELEDFLINE 134
V+P+ E LD+ VREL+ +L+N+
Sbjct: 1213 ----DGLVIPH----EILDICGVRELQKYLVNQ 1237
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.132 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,173,989
Number of Sequences: 539616
Number of extensions: 3130598
Number of successful extensions: 11117
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 72
Number of HSP's that attempted gapping in prelim test: 11072
Number of HSP's gapped (non-prelim): 99
length of query: 225
length of database: 191,569,459
effective HSP length: 113
effective length of query: 112
effective length of database: 130,592,851
effective search space: 14626399312
effective search space used: 14626399312
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)