BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027272
(225 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SP35|TI172_ARATH Mitochondrial import inner membrane translocase subunit TIM17-2
OS=Arabidopsis thaliana GN=TIM17-2 PE=1 SV=2
Length = 243
Score = 288 bits (736), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 161/246 (65%), Positives = 178/246 (72%), Gaps = 24/246 (9%)
Query: 1 MGTPETSREPCPDRILDDVGGAFGMGAVGGSAFHFLKGIYNSPSGTRLLGGTQAVRMNAP 60
MGTPETSREPCPDRILDD+GGAFGMGAVGGSAFHF+KG YNSP G+R +GGTQ+V MNAP
Sbjct: 1 MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFIKGTYNSPKGSRFVGGTQSVSMNAP 60
Query: 61 RVGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIFAGAATGGFLSMRQGLGASARSAVFGG 120
R GGSFAVWGGLFSTFDC+MVYLRQKEDPWNSI AGAATGGFLSMRQG GA++RSA+FGG
Sbjct: 61 RTGGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGAGAASRSAIFGG 120
Query: 121 VLLALIEGAGIMLNKVLSGPQNMPIMIDEPEPVPGMVGGGPPGIPAGLPG---------- 170
VLLALIEGAGIMLNKVL+ PQNM +M D + G
Sbjct: 121 VLLALIEGAGIMLNKVLAQPQNM-MMEDPGMQGMPGMQGMQGMPGMPGMQGMPGMQGMQM 179
Query: 171 ----------NPVQVAESGSSDSDSSWFGGWFGGGQKKEPATSGG-SKTEILESFDAPPV 219
+ Q + SS S SSWFGG F +KKE G SKTE+LESFDAPPV
Sbjct: 180 GQMQSQAQIRSESQNQNTASSSSSSSWFGGLF--DKKKEEVQPGSESKTEVLESFDAPPV 237
Query: 220 PSFEYK 225
PSFE+K
Sbjct: 238 PSFEFK 243
>sp|Q9LN27|TI171_ARATH Mitochondrial import inner membrane translocase subunit TIM17-1
OS=Arabidopsis thaliana GN=TIM17-1 PE=2 SV=1
Length = 218
Score = 265 bits (677), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 141/228 (61%), Positives = 165/228 (72%), Gaps = 13/228 (5%)
Query: 1 MGTPETSREPCPDRILDDVGGAFGMGAVGGSAFHFLKGIYNSPSGTRLLGGTQAVRMNAP 60
MGTPE+SREPCPDRILDDVGGAF MGAVGGSA+H ++GIYNSP G RL GG QA+RM+ P
Sbjct: 1 MGTPESSREPCPDRILDDVGGAFAMGAVGGSAYHLIRGIYNSPGGARLSGGVQALRMSGP 60
Query: 61 RVGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIFAGAATGGFLSMRQGLGASARSAVFGG 120
R GGSF+VWGGL+STFDC++VY RQKEDPWNSI +GAATGGFLS+RQGLGASARSA+ GG
Sbjct: 61 RSGGSFSVWGGLYSTFDCALVYARQKEDPWNSILSGAATGGFLSLRQGLGASARSALVGG 120
Query: 121 VLLALIEGAGIMLNKVLSGPQNMPIMIDEPEPVPGMVGGGPPGIPAGL---PGNPVQVAE 177
VLLA+IEG GIMLNKV S N M D +P G+ G V V E
Sbjct: 121 VLLAMIEGVGIMLNKVQSTAHNEQFMEDH----------AATSLPYGMGQISGQSVPVPE 170
Query: 178 SGSSDSDSSWFGGWFGGGQKKEPATSGGSKTEILESFDAPPVPSFEYK 225
+ SS S S + G +K+ S+T ILESFDAPPVP++E+K
Sbjct: 171 TSSSSSGSVSWFGSLFKKKKETEDHHSESRTHILESFDAPPVPTYEFK 218
>sp|O60830|TI17B_HUMAN Mitochondrial import inner membrane translocase subunit Tim17-B
OS=Homo sapiens GN=TIMM17B PE=1 SV=1
Length = 172
Score = 163 bits (413), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 88/165 (53%), Positives = 110/165 (66%), Gaps = 3/165 (1%)
Query: 5 ETSREPCPDRILDDVGGAFGMGAVGGSAFHFLKGIYNSPSGTR--LLGGTQAVRMNAPRV 62
E +REPCP RI+DD GGAF MG +GG F +KG N+P G R L G AVR+ AP++
Sbjct: 3 EYAREPCPWRIVDDCGGAFTMGVIGGGVFQAIKGFRNAPVGIRHRLRGSANAVRIRAPQI 62
Query: 63 GGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIFAGAATGGFLSMRQGLGASARSAVFGGVL 122
GGSFAVWGGLFST DC +V LR KEDPWNSI +GA TG L+ R G A SA+ GG+L
Sbjct: 63 GGSFAVWGGLFSTIDCGLVRLRGKEDPWNSITSGALTGAVLAARSGPLAMVGSAMMGGIL 122
Query: 123 LALIEGAGIMLNKVLSGP-QNMPIMIDEPEPVPGMVGGGPPGIPA 166
LALIEG GI+L + + +N P +++P +P G PG P+
Sbjct: 123 LALIEGVGILLTRYTAQQFRNAPPFLEDPSQLPPKDGTPAPGYPS 167
>sp|Q2HJE9|TI17B_BOVIN Mitochondrial import inner membrane translocase subunit Tim17-B
OS=Bos taurus GN=TIMM17B PE=2 SV=1
Length = 172
Score = 160 bits (405), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 87/165 (52%), Positives = 109/165 (66%), Gaps = 3/165 (1%)
Query: 5 ETSREPCPDRILDDVGGAFGMGAVGGSAFHFLKGIYNSPSGTR--LLGGTQAVRMNAPRV 62
E +REPCP RI+DD GGAF MG +GG F +KG N+P G R L G AVR+ AP++
Sbjct: 3 EYAREPCPWRIVDDCGGAFTMGVIGGGVFQAIKGFRNAPVGMRHRLRGSVNAVRIRAPQI 62
Query: 63 GGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIFAGAATGGFLSMRQGLGASARSAVFGGVL 122
GGSFAVWGGLFST DC +V LR KEDPWNSI +GA TG L+ R A SA+ GG+L
Sbjct: 63 GGSFAVWGGLFSTIDCGLVRLRGKEDPWNSITSGALTGAVLAARSVPLAMVGSAMMGGIL 122
Query: 123 LALIEGAGIMLNKVLSGP-QNMPIMIDEPEPVPGMVGGGPPGIPA 166
LALIEG GI+L + + +N P +++P +P G PG P+
Sbjct: 123 LALIEGVGILLTRYTAQQFRNAPPFLEDPGQLPSKEGTPGPGYPS 167
>sp|Q9Z0V7|TI17B_MOUSE Mitochondrial import inner membrane translocase subunit Tim17-B
OS=Mus musculus GN=Timm17b PE=2 SV=1
Length = 172
Score = 159 bits (403), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 86/164 (52%), Positives = 107/164 (65%), Gaps = 3/164 (1%)
Query: 5 ETSREPCPDRILDDVGGAFGMGAVGGSAFHFLKGIYNSPSGTR--LLGGTQAVRMNAPRV 62
E +REPCP RI+DD GGAF MG +GG F +KG N+P G R G AVR+ AP++
Sbjct: 3 EYAREPCPWRIVDDCGGAFTMGVIGGGVFQAIKGFRNAPVGIRHRFRGSVNAVRIRAPQI 62
Query: 63 GGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIFAGAATGGFLSMRQGLGASARSAVFGGVL 122
GGSFAVWGGLFST DC +V LR KEDPWNSI +GA TG L+ R G A SA+ GG+L
Sbjct: 63 GGSFAVWGGLFSTIDCGLVRLRGKEDPWNSISSGALTGAVLAARSGPLAMVGSAMMGGIL 122
Query: 123 LALIEGAGIMLNKVLSGP-QNMPIMIDEPEPVPGMVGGGPPGIP 165
LALIEG GI+L + + +N P +++P + G PG P
Sbjct: 123 LALIEGVGILLTRYTAQQFRNAPPFLEDPSQLTPKEGSPAPGYP 166
>sp|Q99595|TI17A_HUMAN Mitochondrial import inner membrane translocase subunit Tim17-A
OS=Homo sapiens GN=TIMM17A PE=1 SV=1
Length = 171
Score = 158 bits (399), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 85/153 (55%), Positives = 102/153 (66%), Gaps = 3/153 (1%)
Query: 5 ETSREPCPDRILDDVGGAFGMGAVGGSAFHFLKGIYNSPSGT--RLLGGTQAVRMNAPRV 62
E +REPCP RI+DD GGAF MG +GG F +KG NSP G RL G A++ AP++
Sbjct: 3 EYAREPCPWRIVDDCGGAFTMGTIGGGIFQAIKGFRNSPVGVNHRLRGSLTAIKTRAPQL 62
Query: 63 GGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIFAGAATGGFLSMRQGLGASARSAVFGGVL 122
GGSFAVWGGLFS DCSMV +R KEDPWNSI +GA TG L+ R G A SA GG+L
Sbjct: 63 GGSFAVWGGLFSMIDCSMVQVRGKEDPWNSITSGALTGAILAARNGPVAMVGSAAMGGIL 122
Query: 123 LALIEGAGIMLNKVLSGP-QNMPIMIDEPEPVP 154
LALIEGAGI+L + S N P ++P +P
Sbjct: 123 LALIEGAGILLTRFASAQFPNGPQFAEDPSQLP 155
>sp|Q9Z0V8|TI17A_MOUSE Mitochondrial import inner membrane translocase subunit Tim17-A
OS=Mus musculus GN=Timm17a PE=2 SV=1
Length = 171
Score = 157 bits (397), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 85/144 (59%), Positives = 98/144 (68%), Gaps = 7/144 (4%)
Query: 5 ETSREPCPDRILDDVGGAFGMGAVGGSAFHFLKGIYNSPSGT--RLLGGTQAVRMNAPRV 62
E +REPCP RI+DD GGAF MG +GG F KG NSP G RL G A++ AP++
Sbjct: 3 EYAREPCPWRIVDDCGGAFTMGTIGGGIFQAFKGFRNSPVGINHRLRGSLTAIKTRAPQL 62
Query: 63 GGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIFAGAATGGFLSMRQGLGASARSAVFGGVL 122
GGSFAVWGGLFST DCSMV +R KEDPWNSI +GA TG L+ R G A SA GG+L
Sbjct: 63 GGSFAVWGGLFSTIDCSMVQIRGKEDPWNSITSGALTGAILAARNGPVAMVGSAAMGGIL 122
Query: 123 LALIEGAGIMLNKVLS-----GPQ 141
LALIEGAGI+L + S GPQ
Sbjct: 123 LALIEGAGILLTRFASAQFPNGPQ 146
>sp|O35092|TI17A_RAT Mitochondrial import inner membrane translocase subunit Tim17-A
OS=Rattus norvegicus GN=Timm17a PE=2 SV=1
Length = 171
Score = 155 bits (392), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/144 (58%), Positives = 97/144 (67%), Gaps = 7/144 (4%)
Query: 5 ETSREPCPDRILDDVGGAFGMGAVGGSAFHFLKGIYNSPSGT--RLLGGTQAVRMNAPRV 62
E +REPCP RI+DD GGAF MG +GG F KG NSP G RL G A++ AP++
Sbjct: 3 EYAREPCPWRIVDDCGGAFTMGTIGGGIFQAFKGFRNSPVGVNHRLRGSLTAIKTRAPQL 62
Query: 63 GGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIFAGAATGGFLSMRQGLGASARSAVFGGVL 122
GGSFAVWGGLFST DC MV +R KEDPWNSI +GA TG L+ R G A SA GG+L
Sbjct: 63 GGSFAVWGGLFSTIDCGMVQIRGKEDPWNSITSGALTGAILAARNGPVAMVGSAAMGGIL 122
Query: 123 LALIEGAGIMLNKVLS-----GPQ 141
LALIEGAGI+L + S GPQ
Sbjct: 123 LALIEGAGILLTRFASAQFPNGPQ 146
>sp|Q9VGA2|TI17C_DROME Probable mitochondrial import inner membrane translocase subunit
Tim17 3 OS=Drosophila melanogaster GN=Tim17a1 PE=2 SV=1
Length = 222
Score = 155 bits (391), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 75/145 (51%), Positives = 100/145 (68%), Gaps = 2/145 (1%)
Query: 5 ETSREPCPDRILDDVGGAFGMGAVGGSAFHFLKGIYNSPSG--TRLLGGTQAVRMNAPRV 62
E +R+PCP RI++D G AF MG +GGS F FLKG N+P+G RL GG V+M P +
Sbjct: 2 EYNRQPCPIRIVEDCGCAFMMGTIGGSLFEFLKGFRNAPTGLQRRLYGGIDLVKMRTPSI 61
Query: 63 GGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIFAGAATGGFLSMRQGLGASARSAVFGGVL 122
GSFAVWG FST DC++V+ RQ+ED WNSI +GAATGG L+ R G+ A A SA+ G ++
Sbjct: 62 AGSFAVWGATFSTVDCALVHYRQREDAWNSILSGAATGGILAARNGIRAMANSALVGCLV 121
Query: 123 LALIEGAGIMLNKVLSGPQNMPIMI 147
LA+IEGAG + + + + I+I
Sbjct: 122 LAMIEGAGAAVATINAADKGAGIVI 146
>sp|Q9VNA0|TI17A_DROME Probable mitochondrial import inner membrane translocase subunit
Tim17 1 OS=Drosophila melanogaster GN=Tim17b1 PE=2 SV=2
Length = 179
Score = 154 bits (390), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 78/133 (58%), Positives = 95/133 (71%), Gaps = 2/133 (1%)
Query: 5 ETSREPCPDRILDDVGGAFGMGAVGGSAFHFLKGIYNSPSGT--RLLGGTQAVRMNAPRV 62
E REPCP RI++D GGAF MGA+GG AF +KG N+PSG RL GG AVR + V
Sbjct: 3 EYGREPCPFRIVEDCGGAFAMGALGGGAFQAIKGFRNAPSGLGYRLSGGLAAVRARSGLV 62
Query: 63 GGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIFAGAATGGFLSMRQGLGASARSAVFGGVL 122
GG+FAVWG FS DCS+VY R+KEDPWN+I +GA TGG L+ R GL + SA+ GG L
Sbjct: 63 GGNFAVWGATFSAIDCSLVYFRKKEDPWNAIISGATTGGILAARTGLTSMLSSALVGGAL 122
Query: 123 LALIEGAGIMLNK 135
LALIEG GI+++
Sbjct: 123 LALIEGVGIVVSH 135
>sp|Q9LYG1|TI173_ARATH Mitochondrial import inner membrane translocase subunit TIM17-3
OS=Arabidopsis thaliana GN=TIM17-3 PE=2 SV=1
Length = 133
Score = 154 bits (389), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 75/127 (59%), Positives = 98/127 (77%)
Query: 1 MGTPETSREPCPDRILDDVGGAFGMGAVGGSAFHFLKGIYNSPSGTRLLGGTQAVRMNAP 60
M T + S+E RI++ +G AFG GAVGGS +HF++G YNSP G R +GGTQA MNAP
Sbjct: 1 MDTKKKSKEHGLYRIVNAIGYAFGAGAVGGSVYHFVRGAYNSPIGARYVGGTQAASMNAP 60
Query: 61 RVGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIFAGAATGGFLSMRQGLGASARSAVFGG 120
R+GG+FAV+GGL STFD ++V +R+KEDPWNSI AGAATGG LS+R+G+ A++ SAV G
Sbjct: 61 RLGGTFAVFGGLLSTFDYALVRIRKKEDPWNSIVAGAATGGVLSIRKGVVAASTSAVMFG 120
Query: 121 VLLALIE 127
LA++
Sbjct: 121 FFLAVLN 127
>sp|Q9VN97|TI17D_DROME Probable mitochondrial import inner membrane translocase subunit
Tim17 4 OS=Drosophila melanogaster GN=Tim17a2 PE=3 SV=1
Length = 224
Score = 149 bits (377), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 71/128 (55%), Positives = 92/128 (71%), Gaps = 2/128 (1%)
Query: 5 ETSREPCPDRILDDVGGAFGMGAVGGSAFHFLKGIYNSPSGTR--LLGGTQAVRMNAPRV 62
E +R+PCP RI++D G AF MG +GGS F +LKG N+PSG R L GG ++VR+ P +
Sbjct: 2 EYNRQPCPIRIVEDCGCAFMMGTMGGSLFQYLKGFRNAPSGLRRGLHGGIESVRLRTPAI 61
Query: 63 GGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIFAGAATGGFLSMRQGLGASARSAVFGGVL 122
GSFA+WG FST DC MV RQ+ED WN+I +GAATGG L+ R G+ A A SA G ++
Sbjct: 62 AGSFAIWGATFSTVDCVMVSYRQREDSWNAIVSGAATGGILAARNGIRAMANSAFVGCLV 121
Query: 123 LALIEGAG 130
LA++EGAG
Sbjct: 122 LAMLEGAG 129
>sp|P59670|TIM17_NEUCR Mitochondrial import inner membrane translocase subunit tim-17
OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987) GN=tim-17 PE=2 SV=1
Length = 155
Score = 149 bits (375), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/151 (51%), Positives = 102/151 (67%), Gaps = 5/151 (3%)
Query: 5 ETSREPCPDRILDDVGGAFGMGAVGGSAFHFLKGIYNSPSGTRLLGGTQAVRMNAPRVGG 64
+ +R+PCP IL+D GGAF MGA+GG+ +H +KG NSP G R +G A++M AP +GG
Sbjct: 2 DHTRDPCPWVILNDFGGAFAMGAIGGTIWHGIKGFRNSPYGERRIGAITAIKMRAPALGG 61
Query: 65 SFAVWGGLFSTFDCSMVYLR-QKEDPWNSIFAGAATGGFLSMRQGLGASARSAVFGGVLL 123
+F VWGGLFSTFDC++ LR KEDPWNSI AG TGG L++R G A+ A+ VLL
Sbjct: 62 NFGVWGGLFSTFDCAIKGLRNHKEDPWNSILAGFFTGGALAVRGGYKAARNGAIGCAVLL 121
Query: 124 ALIEGAGIMLNKVLSGPQNMPIMIDEPEPVP 154
A+IEG GI K+L+G + + P P P
Sbjct: 122 AVIEGVGIGFQKMLAGATKL----EAPAPPP 148
>sp|O44477|TIM17_CAEEL Probable mitochondrial import inner membrane translocase subunit
Tim17 OS=Caenorhabditis elegans GN=tim-17 PE=3 SV=1
Length = 181
Score = 142 bits (357), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 104/176 (59%), Gaps = 11/176 (6%)
Query: 5 ETSREPCPDRILDDVGGAFGMGAVGGSAFHFLKGIYNSPSGTRLLGGTQAVRMNAPRVGG 64
E +REPCP RI DD+G AF MG VGGS F G N+ G +L+G + VRM + G
Sbjct: 3 EYTREPCPYRIGDDIGSAFAMGLVGGSIFQAFGGYKNAAKGKKLVGMMREVRMRSTLTGV 62
Query: 65 SFAVWGGLFSTFDCSMVYLRQKEDPWNSIFAGAATGGFLSMRQGLGASARSAVFGGVLLA 124
FA WGG+FST DC +V +R+KEDP NSI +G TG L++R G A SA+ G V+LA
Sbjct: 63 QFAAWGGMFSTIDCCLVAIRKKEDPINSIVSGGLTGALLAIRSGPKVMAGSAILGSVILA 122
Query: 125 LIEGAGIMLNK----VLSGPQNMPIMIDEPEPV-------PGMVGGGPPGIPAGLP 169
+IEG G++ + ++ Q P +D+P + PG+ P GIP GLP
Sbjct: 123 MIEGVGLVTTRWMGAMMDPTQPPPEALDDPRSLGQKSQAEPGLDQTRPFGIPTGLP 178
>sp|P39515|TIM17_YEAST Mitochondrial import inner membrane translocase subunit TIM17
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=TIM17 PE=1 SV=1
Length = 158
Score = 137 bits (345), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 66/133 (49%), Positives = 91/133 (68%)
Query: 3 TPETSREPCPDRILDDVGGAFGMGAVGGSAFHFLKGIYNSPSGTRLLGGTQAVRMNAPRV 62
+ + SR+PCP IL+D GGAF MGA+GG +H +KG NSP G R G A++ AP +
Sbjct: 2 SADHSRDPCPIVILNDFGGAFAMGAIGGVVWHGIKGFRNSPLGERGSGAMSAIKARAPVL 61
Query: 63 GGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIFAGAATGGFLSMRQGLGASARSAVFGGVL 122
GG+F VWGGLFSTFDC++ +R++EDPWN+I AG TGG L++R G + S++ L
Sbjct: 62 GGNFGVWGGLFSTFDCAVKAVRKREDPWNAIIAGFFTGGALAVRGGWRHTRNSSITCACL 121
Query: 123 LALIEGAGIMLNK 135
L +IEG G+M +
Sbjct: 122 LGVIEGVGLMFQR 134
>sp|P87130|TIM17_SCHPO Mitochondrial import inner membrane translocase subunit tim17
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=tim17 PE=3 SV=1
Length = 164
Score = 135 bits (339), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 101/165 (61%), Gaps = 2/165 (1%)
Query: 1 MGTPETSREPCPDRILDDVGGAFGMGAVGGSAFHFLKGIYNSPSGTRLLGGTQAVRMNAP 60
M + + +R+PCP IL+D G AF MG +GG+ +H +KG NSP G + + A + AP
Sbjct: 1 MASADHTRDPCPYVILNDFGAAFSMGTIGGAIWHSIKGWRNSPPGEKRISAIAAAKTRAP 60
Query: 61 RVGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIFAGAATGGFLSMRQGLGASARSAVFGG 120
+GG+F VWGGLFSTFDC++ +R+KEDPWN+I AG TGG L++R G A+ A+
Sbjct: 61 VLGGNFGVWGGLFSTFDCAVKGVRRKEDPWNAIIAGFFTGGALAVRGGWRATRNGAIGCA 120
Query: 121 VLLALIEGAGIMLNKVLSGPQNMPIMIDEPE-PVPGMVGGGPPGI 164
+LA+ EG GI L + ++ N P+ P+ P G P +
Sbjct: 121 CILAVFEGLGIALGR-MNAEYNRPVAPVIPDAPASGSTSAAPAAV 164
>sp|Q54K35|TIM17_DICDI Mitochondrial import inner membrane translocase subunit tim17
OS=Dictyostelium discoideum GN=timm17 PE=3 SV=1
Length = 183
Score = 113 bits (282), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 77/132 (58%)
Query: 10 PCPDRILDDVGGAFGMGAVGGSAFHFLKGIYNSPSGTRLLGGTQAVRMNAPRVGGSFAVW 69
PCPD+I D GGAF +G V + G SP R+L +R +P+ GG+FA+W
Sbjct: 4 PCPDKIWQDAGGAFAIGYVLMGVVNIGLGFKRSPPNKRVLYTFALLRKKSPKFGGNFAIW 63
Query: 70 GGLFSTFDCSMVYLRQKEDPWNSIFAGAATGGFLSMRQGLGASARSAVFGGVLLALIEGA 129
G LFS FDC++ Y+R+ ED N I AGA TGG L+ R G S ++A FGG+ + +IE
Sbjct: 64 GSLFSGFDCTLSYIRKTEDTVNPIAAGALTGGILAARSGWKHSVQAAAFGGIFIGIIEAF 123
Query: 130 GIMLNKVLSGPQ 141
M+ K + Q
Sbjct: 124 QHMMQKRMQAQQ 135
>sp|Q5M7K0|TIM22_XENTR Mitochondrial import inner membrane translocase subunit Tim22
OS=Xenopus tropicalis GN=timm22 PE=2 SV=1
Length = 186
Score = 41.6 bits (96), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 54/128 (42%), Gaps = 20/128 (15%)
Query: 3 TPETSRE-PCPDRILDDVGGAFGMGAVGGSAF-----HFLKGI-----------YNSPSG 45
TP S E +R+++ G + VGG F GI Y +P+
Sbjct: 44 TPIKSEEQKMMERVMESCGFKAALACVGGFVLGGAFGVFTAGIDTNVGFDPKDPYRTPTA 103
Query: 46 TRLLGGTQAVRMNAPRVGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIFAGAATGGFLSM 105
+L M+ + +FA+ G +FS +C + R K D NS+ +G TGG +
Sbjct: 104 KEVLKDMGQRGMSYAK---NFAIVGAMFSCTECLVESYRGKSDWKNSVISGCITGGAIGF 160
Query: 106 RQGLGASA 113
R GL A A
Sbjct: 161 RAGLKAGA 168
>sp|Q6BZY4|TIM22_YARLI Mitochondrial import inner membrane translocase subunit TIM22
OS=Yarrowia lipolytica (strain CLIB 122 / E 150)
GN=TIM22 PE=3 SV=2
Length = 185
Score = 40.0 bits (92), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 65 SFAVWGGLFSTFDCSMVYLRQKEDPWNSIFAGAATGGFLSMRQG 108
+F GG+FS +C + LR K D WN + AG TGG L+++ G
Sbjct: 106 NFGFIGGVFSGTECCIESLRAKNDIWNGVAAGCLTGGGLAVKAG 149
>sp|Q9CQ85|TIM22_MOUSE Mitochondrial import inner membrane translocase subunit Tim22
OS=Mus musculus GN=Timm22 PE=2 SV=1
Length = 194
Score = 39.3 bits (90), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 40 YNSPSGTRLLGGTQAVRMNAPRVGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIFAGAAT 99
Y +P+ +L M+ + +FA+ G +FS +C + R K D NS+ +G T
Sbjct: 106 YRTPTAKEVLKDMGQRGMSYAK---NFAIVGAMFSCTECLVESYRGKSDWKNSVISGCIT 162
Query: 100 GGFLSMRQGLGASA 113
GG + R G+ A A
Sbjct: 163 GGAIGFRAGVKAGA 176
>sp|Q5BIN4|TIM22_BOVIN Mitochondrial import inner membrane translocase subunit Tim22
OS=Bos taurus GN=TIMM22 PE=2 SV=1
Length = 194
Score = 39.3 bits (90), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 40 YNSPSGTRLLGGTQAVRMNAPRVGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIFAGAAT 99
Y +P+ +L M+ + +FA+ G +FS +C + R K D NS+ +G T
Sbjct: 106 YRTPTAREVLKDMGQRGMSYAK---NFAIVGAMFSCTECLVESYRGKSDWKNSVISGCIT 162
Query: 100 GGFLSMRQGLGA 111
GG + R GL A
Sbjct: 163 GGAIGFRAGLKA 174
>sp|Q9JKW1|TIM22_RAT Mitochondrial import inner membrane translocase subunit Tim22
OS=Rattus norvegicus GN=Timm22 PE=2 SV=2
Length = 192
Score = 38.9 bits (89), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 40 YNSPSGTRLLGGTQAVRMNAPRVGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIFAGAAT 99
Y +P+ +L M+ + +FA+ G +FS +C + R K D NS+ +G T
Sbjct: 104 YRTPTAREVLKDMGQRGMSYAK---NFAIVGAMFSCTECLVESYRGKSDWKNSVISGCIT 160
Query: 100 GGFLSMRQGLGASA 113
GG + R G+ A A
Sbjct: 161 GGAIGFRAGVKAGA 174
>sp|Q9Y584|TIM22_HUMAN Mitochondrial import inner membrane translocase subunit Tim22
OS=Homo sapiens GN=TIMM22 PE=1 SV=2
Length = 194
Score = 38.5 bits (88), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 40 YNSPSGTRLLGGTQAVRMNAPRVGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIFAGAAT 99
Y +P+ +L M+ + +FA+ G +FS +C + R D NS+ +G T
Sbjct: 106 YRTPTAKEVLKDMGQRGMSYAK---NFAIVGAMFSCTECLIESYRGTSDWKNSVISGCIT 162
Query: 100 GGFLSMRQGLGASA 113
GG + R GL A A
Sbjct: 163 GGAIGFRAGLKAGA 176
>sp|Q5U4U5|TIM22_XENLA Mitochondrial import inner membrane translocase subunit Tim22
OS=Xenopus laevis GN=timm22 PE=2 SV=1
Length = 184
Score = 38.5 bits (88), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 65 SFAVWGGLFSTFDCSMVYLRQKEDPWNSIFAGAATGGFLSMRQGLGA 111
+FA+ G +FS +C + R K D NS+ +G TGG + R GL A
Sbjct: 118 NFAIVGAMFSCTECLVESYRGKSDWKNSVMSGCITGGAIGFRAGLKA 164
>sp|Q6BT35|TIM22_DEBHA Mitochondrial import inner membrane translocase subunit TIM22
OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 /
JCM 1990 / NBRC 0083 / IGC 2968) GN=TIM22 PE=3 SV=1
Length = 182
Score = 37.4 bits (85), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Query: 41 NSPSGTRLLGGTQAVRMNAPRVGG-------SFAVWGGLFSTFDCSMVYLRQKEDPWNSI 93
N+ S R L Q +++ +G +F G ++S +C++ LR K D +N +
Sbjct: 72 NAVSNIRDLPFKQQMKLQFSDMGKRTYSSAKNFGYIGMVYSGVECAIESLRAKHDIYNGV 131
Query: 94 FAGAATGGFLSMRQG 108
AG TGG L++R G
Sbjct: 132 SAGCITGGGLAIRAG 146
>sp|A2RVP7|TI221_ARATH Mitochondrial import inner membrane translocase subunit TIM22-1
OS=Arabidopsis thaliana GN=TIM22-1 PE=2 SV=1
Length = 173
Score = 37.0 bits (84), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%)
Query: 65 SFAVWGGLFSTFDCSMVYLRQKEDPWNSIFAGAATGGFLSMRQG 108
+FAV G +FS +C + R K D N+ AG TGG +S R G
Sbjct: 104 TFAVMGLVFSAAECIVEKARAKHDTVNTAIAGCVTGGSMSARGG 147
>sp|P87146|TIM22_SCHPO Mitochondrial import inner membrane translocase subunit tim22
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=tim22 PE=3 SV=1
Length = 175
Score = 37.0 bits (84), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 36/75 (48%)
Query: 34 HFLKGIYNSPSGTRLLGGTQAVRMNAPRVGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSI 93
H IY P ++ + + + +F + G ++S +C + R K D +N+I
Sbjct: 75 HIDPKIYEKPFREQIRIQARDMGSRSFSTAKNFGLLGLIYSGSECCIEAFRAKTDIYNAI 134
Query: 94 FAGAATGGFLSMRQG 108
AG TGG L++R G
Sbjct: 135 AAGVFTGGALAVRSG 149
>sp|A1XJK0|TI224_ARATH Mitochondrial import inner membrane translocase subunit TIM22-4
OS=Arabidopsis thaliana GN=TIM22-4 PE=2 SV=3
Length = 142
Score = 36.2 bits (82), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 31/63 (49%)
Query: 65 SFAVWGGLFSTFDCSMVYLRQKEDPWNSIFAGAATGGFLSMRQGLGASARSAVFGGVLLA 124
+FAV G +FS +C + R K D N+ AG TGG +S R G A+ +
Sbjct: 73 TFAVMGLVFSAAECIVEKARAKHDTVNTAIAGCVTGGSMSARGGPKAACIGCAGFAIFSV 132
Query: 125 LIE 127
LIE
Sbjct: 133 LIE 135
>sp|Q9USM7|TIM23_SCHPO Mitochondrial import inner membrane translocase subunit tim23
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=tim23 PE=3 SV=1
Length = 210
Score = 35.0 bits (79), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 33/70 (47%)
Query: 47 RLLGGTQAVRMNAPRVGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIFAGAATGGFLSMR 106
RL G V P VG S V +++ + + Y RQK NS+ AGA TG
Sbjct: 119 RLNGILNGVTRRGPFVGNSLGVLALVYNGINSLIGYKRQKHGWENSVAAGALTGALYKST 178
Query: 107 QGLGASARSA 116
+GL A A S+
Sbjct: 179 RGLRAMAISS 188
>sp|Q9VTE2|SUUR_DROME Protein suppressor of underreplication OS=Drosophila melanogaster
GN=SuUR PE=1 SV=3
Length = 962
Score = 34.7 bits (78), Expect = 0.48, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 9/52 (17%)
Query: 169 PGNPVQVAESGSSDSDSSWFGGWFGGGQKKEPATSGGSKTEILESFDAPPVP 220
P +P Q A+S + + WFG FGG G S+T +ES AP P
Sbjct: 887 PKSPKQGAKSTQATKLTRWFGSVFGG---------GASQTSSVESVSAPSTP 929
>sp|Q75E80|TIM22_ASHGO Mitochondrial import inner membrane translocase subunit TIM22
OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 /
FGSC 9923 / NRRL Y-1056) GN=TIM22 PE=3 SV=1
Length = 201
Score = 34.7 bits (78), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 65 SFAVWGGLFSTFDCSMVYLRQKEDPWNSIFAGAATGGFLSMRQG 108
+F G ++S +C++ LR K D +N + AG TGG L+ + G
Sbjct: 122 NFGYIGMIYSGVECTIESLRAKNDLYNGVAAGCLTGGGLAYKSG 165
>sp|Q6FT37|TIM22_CANGA Mitochondrial import inner membrane translocase subunit TIM22
OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM
3761 / NBRC 0622 / NRRL Y-65) GN=TIM22 PE=3 SV=1
Length = 193
Score = 34.7 bits (78), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 65 SFAVWGGLFSTFDCSMVYLRQKEDPWNSIFAGAATGGFLSMRQG 108
+F G +++ +C++ LR K D +N I AG TGG L+ + G
Sbjct: 114 NFGYIGMIYAGVECAVESLRAKNDIYNGITAGCITGGGLAYKSG 157
>sp|Q2UAP8|TIM22_ASPOR Mitochondrial import inner membrane translocase subunit tim22
OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40)
GN=tim22 PE=3 SV=1
Length = 184
Score = 34.7 bits (78), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 65 SFAVWGGLFSTFDCSMVYLRQKEDPWNSIFAGAATGGFL 103
+F + G L+S +C + LR K D NS+ +G TGG L
Sbjct: 113 NFGIVGALYSGTECCVEGLRAKNDLSNSVISGCITGGIL 151
>sp|Q0CGY7|SEC16_ASPTN COPII coat assembly protein sec16 OS=Aspergillus terreus (strain NIH
2624 / FGSC A1156) GN=sec16 PE=3 SV=1
Length = 1806
Score = 34.3 bits (77), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 20/30 (66%)
Query: 176 AESGSSDSDSSWFGGWFGGGQKKEPATSGG 205
A++ SSW+ GWFGGG+K+E SGG
Sbjct: 1613 AKNAPQQKKSSWWPGWFGGGKKEENNNSGG 1642
>sp|Q9C1E8|TIM22_NEUCR Mitochondrial import inner membrane translocase subunit tim-22
OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987) GN=tim-22 PE=3 SV=2
Length = 194
Score = 34.3 bits (77), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 33/71 (46%)
Query: 43 PSGTRLLGGTQAVRMNAPRVGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIFAGAATGGF 102
P +L G + + + +FA G LFS +C + LR K D N + AG TG
Sbjct: 100 PLKEQLKHGFKDMGQRSYSTAKNFAKVGALFSGIECGIEGLRAKNDLGNGVAAGCLTGAI 159
Query: 103 LSMRQGLGASA 113
L+ G A+A
Sbjct: 160 LAKNGGPQAAA 170
>sp|Q6CRJ6|TIM22_KLULA Mitochondrial import inner membrane translocase subunit TIM22
OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=TIM22
PE=3 SV=1
Length = 196
Score = 33.9 bits (76), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 25/44 (56%)
Query: 65 SFAVWGGLFSTFDCSMVYLRQKEDPWNSIFAGAATGGFLSMRQG 108
+F G ++S +C + LR K D +N + AG TGG L+ + G
Sbjct: 117 NFGYIGMIYSGVECVVESLRAKNDIYNGVAAGCLTGGGLAYKSG 160
>sp|Q9URZ5|VPS1_SCHPO Vacuolar protein sorting-associated protein 1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=vps1 PE=3 SV=2
Length = 678
Score = 32.7 bits (73), Expect = 2.0, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 11/86 (12%)
Query: 121 VLLALIEGAGIMLNKV----LSGPQNMPIMIDE-PEPVPGMVGGGPPGIPAGLPGNPVQV 175
+++ ++ G +N V LSG Q M I+ + +P+P P L NPV
Sbjct: 490 LVMDMVAMEGSYINTVHPDFLSGHQAMAIVQSQNSKPIPV-----DPKTGKALTNNPVPP 544
Query: 176 AESGSSDSDSSWFGGWFGGGQKKEPA 201
E+ SS S ++FG +FG KK A
Sbjct: 545 VET-SSSSGQNFFGSFFGSKNKKRLA 569
>sp|Q6NKU9|TI223_ARATH Mitochondrial import inner membrane translocase subunit TIM22-3
OS=Arabidopsis thaliana GN=TIM22-3 PE=2 SV=1
Length = 214
Score = 32.3 bits (72), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 52/126 (41%), Gaps = 11/126 (8%)
Query: 10 PCPDRILDDVGGAFGMGAVGGSAFHFLKGIYNSPSGTRLLGGTQAVRMNAPRVGGSFAVW 69
P P L G GA GS F + G++ G + ++A + +FAV
Sbjct: 42 PAPAVCLVRFAGDAASGAFMGSVFGYGSGLFKKK-------GFKGSFVDAGQSAKTFAVL 94
Query: 70 GGLFSTFDCSMVYLRQKEDPWNSIFAGAATGGFLSMRQGLGASARSAVFGGVLLALIEGA 129
G+ S C + +R K+D N AG TG LS A +S + G ++EG
Sbjct: 95 SGVHSLVVCLLKQIRGKDDAINVGVAGCCTGLALSFPGAPQAMLQSCLTFGAFSFILEG- 153
Query: 130 GIMLNK 135
LNK
Sbjct: 154 ---LNK 156
>sp|Q9NPL8|TIDC1_HUMAN Translocase of inner mitochondrial membrane domain-containing
protein 1 OS=Homo sapiens GN=TIMMDC1 PE=1 SV=2
Length = 285
Score = 32.0 bits (71), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 61 RVGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIFAGAATGGFLSMRQGLGASARSAVFGG 120
R G AV+ +F+T + S+ R K+ + + AGA TG + GL R V GG
Sbjct: 137 RWGWRTAVFVTIFNTVNTSLNVYRNKDALSHFVIAGAVTGSLFRINVGL----RGLVAGG 192
Query: 121 VLLALI 126
++ AL+
Sbjct: 193 IIGALL 198
>sp|Q94EH2|TI222_ARATH Mitochondrial import inner membrane translocase subunit TIM22-2
OS=Arabidopsis thaliana GN=TIM22-2 PE=2 SV=1
Length = 210
Score = 31.6 bits (70), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 52/126 (41%), Gaps = 11/126 (8%)
Query: 10 PCPDRILDDVGGAFGMGAVGGSAFHFLKGIYNSPSGTRLLGGTQAVRMNAPRVGGSFAVW 69
P P L G GAV GS F + G++ G + +A + +FAV
Sbjct: 42 PAPAVCLFRFAGDAAGGAVMGSIFGYGSGLFKKK-------GFKGSFADAGQSAKTFAVL 94
Query: 70 GGLFSTFDCSMVYLRQKEDPWNSIFAGAATGGFLSMRQGLGASARSAVFGGVLLALIEGA 129
G+ S C + +R K+D N AG TG LS A +S + G ++EG
Sbjct: 95 SGVHSLVVCLLKQIRGKDDAINVGVAGCCTGLALSFPGAPQALLQSCLTFGAFSFILEG- 153
Query: 130 GIMLNK 135
LNK
Sbjct: 154 ---LNK 156
>sp|B2VEZ3|NTPA_ERWT9 Non-canonical purine NTP pyrophosphatase OS=Erwinia tasmaniensis
(strain DSM 17950 / Et1/99) GN=ETA_28410 PE=3 SV=1
Length = 205
Score = 31.2 bits (69), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 74 STFDCSMVYLRQKEDPWNSIFAGAATGGFLSMRQGLG 110
+ F C +VYLR DP +F G+ TG G+G
Sbjct: 124 AHFHCVLVYLRHAADPTPLVFHGSWTGEIAHSAAGVG 160
>sp|P25710|NUJM_NEUCR NADH-ubiquinone oxidoreductase 21.3 kDa subunit OS=Neurospora
crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 /
DSM 1257 / FGSC 987) GN=B13D24.010 PE=4 SV=1
Length = 200
Score = 30.8 bits (68), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 7/60 (11%)
Query: 65 SFAVWGGLFSTFDCSMVYLRQKEDPWNS---IFAGAATGGFLSMR----QGLGASARSAV 117
SF + GG++ + LR+KED WN F G + G S+R G GA A S V
Sbjct: 60 SFTLAGGIYRFAQQASANLREKEDGWNHAIGAFLGGSVMGLRSLRFPVILGFGAMAGSVV 119
>sp|O48528|OP163_ARATH Outer envelope pore protein 16-3, chloroplastic/mitochondrial
OS=Arabidopsis thaliana GN=OEP163 PE=1 SV=1
Length = 159
Score = 30.8 bits (68), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 58/134 (43%), Gaps = 14/134 (10%)
Query: 23 FGMGAVGGSAFHFLKGIYNSPSGTRLLGGTQAVRMNAPRVGGSFAVWGGLFSTFDCSMVY 82
FG G + G+ K + L G + ++M G +FA GG++ + +
Sbjct: 27 FGAGTIYGTILATWKDVPRVERNVALPGLIRTLKMMGTH-GLTFAAIGGVYIGVEQLVQN 85
Query: 83 LRQKEDPWNSIFAGAATGGFLSMRQGLGASARS---AVFGGVLL----ALIEGAGIMLNK 135
R K D +N A GGF++ LG ARS A+ G L ALI+ G +
Sbjct: 86 FRSKRDFYN-----GAIGGFVAGASVLGYRARSIPTAIAAGATLAVTSALIDSGG-QTTR 139
Query: 136 VLSGPQNMPIMIDE 149
V +G + P +++
Sbjct: 140 VDNGREYYPYTVEK 153
>sp|Q9SK47|TAT3_ARATH Probable aminotransferase TAT3 OS=Arabidopsis thaliana GN=TAT3 PE=2
SV=1
Length = 445
Score = 30.8 bits (68), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 34/93 (36%), Gaps = 3/93 (3%)
Query: 133 LNKVLSGPQNMPIMIDEPEPVPGMVGGGPPGIPAGLPGNPVQVAESGSSDS---DSSWFG 189
LNKV + + IMI E +V G P IP G + V GS + W
Sbjct: 210 LNKVAEMARKLGIMIISDEVYDHVVYGDKPFIPMGKFASIAPVITLGSISKGWVNPGWRV 269
Query: 190 GWFGGGQKKEPATSGGSKTEILESFDAPPVPSF 222
GW S G I + D P PSF
Sbjct: 270 GWIAMNDPNGIFVSTGVVQAIEDFLDLTPQPSF 302
>sp|A4FBM2|WHIA_SACEN Putative sporulation transcription regulator WhiA
OS=Saccharopolyspora erythraea (strain NRRL 23338)
GN=whiA PE=3 SV=1
Length = 326
Score = 30.4 bits (67), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Query: 161 PPGIPAGLPGNPVQVAESGSSDSDSSWFGGWFGGGQKKEPATS 203
P G P + G P V G+ DS+S+W G + G EP S
Sbjct: 106 PRGRP--VRGLPAHVVSGGACDSESAWRGAFLAHGSLTEPGRS 146
>sp|Q2U968|SEC16_ASPOR COPII coat assembly protein sec16 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=sec16 PE=3 SV=1
Length = 1843
Score = 30.4 bits (67), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 10/13 (76%), Positives = 12/13 (92%)
Query: 186 SWFGGWFGGGQKK 198
SWFGGWFGG +K+
Sbjct: 1662 SWFGGWFGGAKKE 1674
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.138 0.430
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,652,517
Number of Sequences: 539616
Number of extensions: 4952666
Number of successful extensions: 11719
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 83
Number of HSP's that attempted gapping in prelim test: 11457
Number of HSP's gapped (non-prelim): 354
length of query: 225
length of database: 191,569,459
effective HSP length: 113
effective length of query: 112
effective length of database: 130,592,851
effective search space: 14626399312
effective search space used: 14626399312
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 59 (27.3 bits)