BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027275
(225 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q4KMJ1|CHAC2_DANRE Cation transport regulator-like protein 2 OS=Danio rerio GN=chac2
PE=2 SV=1
Length = 182
Score = 129 bits (324), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/180 (41%), Positives = 98/180 (54%), Gaps = 8/180 (4%)
Query: 3 FWVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETIC 62
WVFGYGSL+W F Y++K +GF+K + R F DHRG P P R TL + E
Sbjct: 1 MWVFGYGSLIWKVDFPYEDKRVGFVKGFSRRFWQGSTDHRGVPGKPGRVVTLIEDPEGCV 60
Query: 63 WGVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKV 122
WGVAY + G E+E EYL+ RE V F+ + E QP ++ S
Sbjct: 61 WGVAYKLPSGQEQE--VKEYLDYREKGGYGVITVTFHPKDEQQQPMQDTLLYIGSC---- 114
Query: 123 SNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAMFDIGHE--DDYIIELANEVRK 180
N YLGPAPLE +A+QI +VGP G N DYLF+L A+ + E DD++ L V++
Sbjct: 115 DNPNYLGPAPLETIAQQIVKSVGPSGKNTDYLFELADALRQLVPEDLDDHLFSLERLVKQ 174
>sp|Q5ZI66|CHAC2_CHICK Cation transport regulator-like protein 2 OS=Gallus gallus GN=chac2
PE=2 SV=1
Length = 186
Score = 124 bits (312), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/166 (44%), Positives = 93/166 (56%), Gaps = 7/166 (4%)
Query: 3 FWVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETIC 62
WVFGYGSL+W F Y EK++G I+ Y R F DHRG P P R TL + E
Sbjct: 1 MWVFGYGSLIWKVDFPYQEKMVGRIRGYSRRFWQGSTDHRGVPGKPGRVVTLVEDPEGCV 60
Query: 63 WGVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKV 122
WGVAY + G E E A YL+ RE T V FY + +P V+++ T D
Sbjct: 61 WGVAYRLPAGQECEVKA--YLDFREKGGYRTTTVVFYPKDSSIKPF--DVLLYIGTRD-- 114
Query: 123 SNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAMFDIGHED 168
N YLGPAPL+E+A QI AVGP G N +YLF+L +M ++ ED
Sbjct: 115 -NPNYLGPAPLQEIAEQIIDAVGPSGRNTEYLFELANSMRNLVPED 159
>sp|Q5PPV4|CHAC2_XENLA Cation transport regulator-like protein 2 OS=Xenopus laevis
GN=chac2 PE=2 SV=1
Length = 184
Score = 124 bits (311), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 76/179 (42%), Positives = 101/179 (56%), Gaps = 9/179 (5%)
Query: 4 WVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICW 63
WVFGYGSL+W F Y EK++G+I Y R F DHRG P P R TL + E W
Sbjct: 2 WVFGYGSLIWKVDFPYVEKLVGYIMCYSRRFWQGSTDHRGVPGKPGRVVTLVEDPEGCVW 61
Query: 64 GVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVS 123
GVAY + G E+E A YL+ RE + V FY + QP V+++ T D
Sbjct: 62 GVAYRLPEGKEEEVKA--YLDFREKGGYRTSTVVFYPKDPSIQP--FNVLLYIGTCD--- 114
Query: 124 NKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAMFDIGHE--DDYIIELANEVRK 180
N YLGPAPLE++A QI AVGP G N +YLF+L ++ ++ E D+++ L VR+
Sbjct: 115 NPNYLGPAPLEDIAEQILNAVGPSGRNTEYLFELANSLRNLVPEDADEHLFSLEKLVRQ 173
>sp|Q8WUX2|CHAC2_HUMAN Cation transport regulator-like protein 2 OS=Homo sapiens GN=CHAC2
PE=2 SV=1
Length = 184
Score = 121 bits (304), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/181 (40%), Positives = 102/181 (56%), Gaps = 9/181 (4%)
Query: 4 WVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICW 63
WVFGYGSL+W F Y +K++G+I +Y R F DHRG P P R TL + W
Sbjct: 2 WVFGYGSLIWKVDFPYQDKLVGYITNYSRRFWQGSTDHRGVPGKPGRVVTLVEDPAGCVW 61
Query: 64 GVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVS 123
GVAY + G E+E A YL+ RE T V FY + ++P V+++ T D
Sbjct: 62 GVAYRLPVGKEEEVKA--YLDFREKGGYRTTTVIFYPKDPTTKPF--SVLLYIGTCD--- 114
Query: 124 NKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAMFDIGHE--DDYIIELANEVRKE 181
N YLGPAPLE++A QI A GP G N +YLF+L ++ ++ E D+++ L V++
Sbjct: 115 NPDYLGPAPLEDIAEQIFNAAGPSGRNTEYLFELANSIRNLVPEEADEHLFALEKLVKER 174
Query: 182 L 182
L
Sbjct: 175 L 175
>sp|Q641Z5|CHAC2_RAT Cation transport regulator-like protein 2 OS=Rattus norvegicus
GN=Chac2 PE=2 SV=1
Length = 178
Score = 121 bits (303), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 100/181 (55%), Gaps = 9/181 (4%)
Query: 4 WVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICW 63
WVFGYGSL+W F Y +K++G+I +Y R F DHRG P P R TL + W
Sbjct: 2 WVFGYGSLIWKVDFPYQDKLVGYITNYSRRFWQGSTDHRGVPGKPGRVVTLVEDPGGSVW 61
Query: 64 GVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVS 123
GVAY + G E+E YL+ RE T V FY + ++P V+++ T D
Sbjct: 62 GVAYKLPVGKEEE--VKTYLDFREKGGYRTTTVIFYPKDSTTKPF--SVLLYIGTCD--- 114
Query: 124 NKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAMFDIGHE--DDYIIELANEVRKE 181
N YLGPAPLE++A QI A GP G N +YLF+L ++ + E D+++ L V++
Sbjct: 115 NPNYLGPAPLEDIAEQIFNAAGPSGRNTEYLFELADSIRKLVPEDADEHLFSLEKLVKER 174
Query: 182 L 182
L
Sbjct: 175 L 175
>sp|Q9CQG1|CHAC2_MOUSE Cation transport regulator-like protein 2 OS=Mus musculus GN=Chac2
PE=2 SV=1
Length = 178
Score = 121 bits (303), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 100/181 (55%), Gaps = 9/181 (4%)
Query: 4 WVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICW 63
WVFGYGSL+W F Y +K++G+I +Y R F DHRG P P R TL + W
Sbjct: 2 WVFGYGSLIWKVDFPYQDKLVGYITNYSRRFWQGSTDHRGVPGKPGRVVTLVEDPGGSVW 61
Query: 64 GVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVS 123
GVAY + G E+E YL+ RE T V FY + ++P V+++ T D
Sbjct: 62 GVAYKLPVGKEEE--VKTYLDFREKGGYRTTTVIFYPKDSTTKPF--SVLLYIGTCD--- 114
Query: 124 NKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAMFDIGHE--DDYIIELANEVRKE 181
N YLGPAPLE++A QI A GP G N +YLF+L ++ + E D+++ L V++
Sbjct: 115 NPNYLGPAPLEDIAEQIFNAAGPSGRNTEYLFELADSVRKLVPEDADEHLFSLEKLVKER 174
Query: 182 L 182
L
Sbjct: 175 L 175
>sp|B3STU3|CHAC1_RAT Cation transport regulator-like protein 1 OS=Rattus norvegicus
GN=Chac1 PE=2 SV=1
Length = 222
Score = 114 bits (285), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 90/163 (55%), Gaps = 11/163 (6%)
Query: 2 VFWVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETI 61
W+FGYGSLVW P F Y + +GF++ Y R F HRG+ + P R TL + E
Sbjct: 32 ALWIFGYGSLVWKPDFAYSDSRVGFVRGYSRRFWQGDTFHRGSDKMPGRVVTLLEDHEGC 91
Query: 62 CWGVAYCVRGGPEKERLAMEYLERREC---EYDSKTLVDFYREGEPSQPALTGVIVFTST 118
WGVAY VRG E+ A++YL RE YD+K V FY + P QP LT + + +T
Sbjct: 92 TWGVAYQVRG--EQVSEALKYLNVREAVLGGYDTKE-VTFYPQDTPDQP-LT-ALAYVAT 146
Query: 119 PDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAM 161
P N YLGPAP E +A QI G G+N +YL +L M
Sbjct: 147 P---QNPGYLGPAPEEVIATQILACRGFSGHNLEYLLRLADFM 186
>sp|Q8R3J5|CHAC1_MOUSE Cation transport regulator-like protein 1 OS=Mus musculus GN=Chac1
PE=1 SV=2
Length = 223
Score = 114 bits (285), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 91/163 (55%), Gaps = 11/163 (6%)
Query: 2 VFWVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETI 61
W+FGYGSLVW P F Y + +GF++ Y R F HRG+ + P R TL + +E
Sbjct: 33 ALWIFGYGSLVWKPDFAYSDSRVGFVRGYSRRFWQGDTFHRGSDKMPGRVVTLLEDREGC 92
Query: 62 CWGVAYCVRGGPEKERLAMEYLERREC---EYDSKTLVDFYREGEPSQPALTGVIVFTST 118
WGVAY VRG E+ A++YL RE YD+K V FY + P QP LT + + +T
Sbjct: 93 TWGVAYQVRG--EQVNEALKYLNVREAVLGGYDTKE-VTFYPQDTPDQP-LT-ALAYVAT 147
Query: 119 PDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAM 161
P N YLGPAP E +A QI G G+N +YL +L M
Sbjct: 148 P---QNPGYLGPAPEEVIATQILACRGFSGHNLEYLLRLADFM 187
>sp|Q9BUX1|CHAC1_HUMAN Cation transport regulator-like protein 1 OS=Homo sapiens GN=CHAC1
PE=1 SV=2
Length = 264
Score = 114 bits (284), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 97/182 (53%), Gaps = 13/182 (7%)
Query: 2 VFWVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETI 61
W+FGYGSLVW P F Y + +GF++ Y R F HRG+ + P R TL + E
Sbjct: 74 ALWIFGYGSLVWRPDFAYSDSRVGFVRGYSRRFWQGDTFHRGSDKMPGRVVTLLEDHEGC 133
Query: 62 CWGVAYCVRGGPEKERLAMEYLERREC---EYDSKTLVDFYREGEPSQPALTGVIVFTST 118
WGVAY V+G E+ A++YL RE YD+K V FY + P QP + + +T
Sbjct: 134 TWGVAYQVQG--EQVSKALKYLNVREAVLGGYDTKE-VTFYPQDAPDQP--LKALAYVAT 188
Query: 119 PDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAMFDIG--HEDDYIIELAN 176
P N YLGPAP E +A QI G G+N +YL +L M G +D+++ + +
Sbjct: 189 P---QNPGYLGPAPEEAIATQILACRGFSGHNLEYLLRLADFMQLCGPQAQDEHLAAIVD 245
Query: 177 EV 178
V
Sbjct: 246 AV 247
>sp|Q5SPB6|CHAC1_DANRE Cation transport regulator-like protein 1 OS=Danio rerio GN=chac1
PE=2 SV=1
Length = 196
Score = 109 bits (273), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 91/162 (56%), Gaps = 11/162 (6%)
Query: 3 FWVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETIC 62
W+FGYGSLVW P F+Y +G+IK Y+R F HRG + P R TL + +
Sbjct: 13 LWIFGYGSLVWKPDFKYKRSKVGYIKGYKRRFWHGDNFHRGDDEMPGRVVTLIEEDDVCT 72
Query: 63 WGVAYCVRGGPEKERLAMEYLERREC---EYDSKTLVDFYREGEPSQPALTGVIVFTSTP 119
WGVA+ V G +E L +YL RE Y ++ VDF+ G +QP + +V+ +TP
Sbjct: 73 WGVAFEVTGSQMEESL--KYLNVREAVRGGYLTRA-VDFFPRGT-NQPPVQA-LVYIATP 127
Query: 120 DKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAM 161
D N YLGPA EE+A QIA G G+N +YL +L + M
Sbjct: 128 D---NPIYLGPASTEEIASQIAVCKGNSGHNIEYLLRLAEFM 166
>sp|Q0IIH4|CHAC2_BOVIN Cation transport regulator-like protein 2 OS=Bos taurus GN=CHAC2
PE=2 SV=1
Length = 176
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 96/181 (53%), Gaps = 21/181 (11%)
Query: 4 WVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICW 63
WVFGYGSL+W F Y +K++G+I Y R F DHRG P + W
Sbjct: 2 WVFGYGSLIWKVDFPYQDKLVGYISGYSRRFWQGSTDHRGVPGKGS------------VW 49
Query: 64 GVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVS 123
GVAY + G E+E A YL+ RE T V FY + ++P V+++ T D
Sbjct: 50 GVAYKLPVGKEEEVKA--YLDFREKGGYRTTTVIFYPKDSTTEPF--SVLLYIGTRD--- 102
Query: 124 NKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAMFDIGHE--DDYIIELANEVRKE 181
N YLGPAPLE++A QI A GP G N +YLF+L +M + E D+++ L V++
Sbjct: 103 NPNYLGPAPLEDIAEQIFNAAGPSGKNTEYLFELANSMRSLVPEDADEHLFSLEKLVKER 162
Query: 182 L 182
L
Sbjct: 163 L 163
>sp|P87305|CHAC_SCHPO Cation transport regulator-like protein OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBC31F10.03 PE=3
SV=1
Length = 203
Score = 88.6 bits (218), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 92/197 (46%), Gaps = 24/197 (12%)
Query: 3 FWVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETI- 61
WVFGYGSL+W+P YD I FIK Y R F + DHRGT P TL +E
Sbjct: 10 LWVFGYGSLIWHPPPHYDYSIPCFIKGYVRRFWMRSEDHRGTVNSPGLVLTLIPYEEWKQ 69
Query: 62 ------------CWGVAYCVRGGPEKERLAM-EYLERRECEYDSKTLVDFYREGEPSQPA 108
CWG+A+ + P K + EYL+ RE + V Y P
Sbjct: 70 FSDWSFTPFDEGCWGMAFRI---PAKYATQVREYLDDREVNGYTAHSVPVYAHTGDEIPV 126
Query: 109 LTGVIVFTSTPDKVSNKYYLGPA-PLEEMARQIATAVGPCGNNRDYLFKLEKAMFDIGHE 167
L +V+ T S P+ L +MA+ I+T G G+N YLF+L K + + E
Sbjct: 127 LENCLVYVGT----SKSPQFQPSDDLTQMAKIISTRRGKSGDNFVYLFELAKCLRHLSPE 182
Query: 168 --DDYIIELANEVRKEL 182
D ++ EL EVRK++
Sbjct: 183 SKDIHVFELEAEVRKQM 199
>sp|P39163|CHAC_ECOLI Cation transport protein ChaC OS=Escherichia coli (strain K12)
GN=chaC PE=3 SV=3
Length = 231
Score = 82.0 bits (201), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 82/180 (45%), Gaps = 9/180 (5%)
Query: 4 WVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICW 63
W+FGYGSL+WNP E+ E G + + R F L RGT P R L++ T
Sbjct: 48 WIFGYGSLMWNPALEFTESCTGTLVGWHRAFCLRLTAGRGTAHQPGRMLALKEGGRTT-- 105
Query: 64 GVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVS 123
GVAY + PE E L E + E + + + + + IVF P
Sbjct: 106 GVAYRL---PE-ETLEQELTLLWKREMITGCYLPTWCQLDLDDGRTVNAIVFIMDP---R 158
Query: 124 NKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAMFDIGHEDDYIIELANEVRKELG 183
+ Y + +A IA A GP G N YLF LE+ + +G +DD + +L V+K L
Sbjct: 159 HPEYESDTRAQVIAPLIAAASGPLGTNAQYLFSLEQELIKLGMQDDGLNDLLVSVKKLLA 218
>sp|P32656|CHAC_YEAST Cation transport regulator-like protein OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YER163C PE=1 SV=1
Length = 232
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 84/199 (42%), Gaps = 42/199 (21%)
Query: 3 FWVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTL-------- 54
WV GYGSL++ P Y +I I + R F + DHRGTP +P R TL
Sbjct: 8 IWVLGYGSLIYKPPSHYTHRIPAIIHGFARRFWQSSTDHRGTPANPGRVATLIPYEDIIR 67
Query: 55 -----------------EKSQETICWGVAYCVRGGPEKERLAMEYLERRECEYDSKTLVD 97
+ + + GV Y + PE + EYL RE + V+
Sbjct: 68 QTAFLKNVNLYSESAPIQDPDDLVTIGVVYYI--PPEHAQEVREYLNVREQNGYTLHEVE 125
Query: 98 FYREGEPSQPALTG---------------VIVFTSTPDKVSNKYYLGPAPLEEMARQIAT 142
+ E A G V++ + + N+ ++GP ++E A+ IA
Sbjct: 126 VHLETNREHEAELGEALEQLPRHNKSGKRVLLTSVYIGTIDNEAFVGPETVDETAKVIAV 185
Query: 143 AVGPCGNNRDYLFKLEKAM 161
+ GP G+N +YL KLE+A+
Sbjct: 186 SHGPSGSNYEYLAKLEQAL 204
>sp|P02259|H5_CHICK Histone H5 OS=Gallus gallus PE=1 SV=2
Length = 190
Score = 34.3 bits (77), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 148 GNNRDYLFKLEKAMFDIGHEDDYIIELANEVRKELGTAEKGILKERKLVGSSSRMPLTKS 207
G++R + K K+ + +GH D I+L+ +R+ L G+LK+ K VG+S L KS
Sbjct: 45 GSSRQSIQKYIKSHYKVGHNADLQIKLS--IRRLLAA---GVLKQTKGVGASGSFRLAKS 99
Query: 208 HIPTLQLGLRPEAV 221
G + +AV
Sbjct: 100 DKAKRSPGKKKKAV 113
>sp|Q83BJ0|GPDA_COXBU Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Coxiella burnetii
(strain RSA 493 / Nine Mile phase I) GN=gpsA PE=1 SV=1
Length = 332
Score = 34.3 bits (77), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 57/129 (44%), Gaps = 8/129 (6%)
Query: 81 EYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQI 140
E + R + D+KT + + +G L +V T +V GP+ E+A +
Sbjct: 90 EVITRMKPLIDAKTRIAWGTKGLAKGSRLLHEVVATEL-GQVPMAVISGPSLATEVAANL 148
Query: 141 ATAVGPCGNN----RDYLFKLEKAMFDIGHEDDYI-IELANEVRKELGTAEKGILKERKL 195
TAV NN +D + +L F + DD I +EL V+ L A GI KL
Sbjct: 149 PTAVSLASNNSQFSKDLIERLHGQRFRVYKNDDMIGVELCGSVKNILAIA-TGISDGLKL 207
Query: 196 VGSSSRMPL 204
GS++R L
Sbjct: 208 -GSNARAAL 215
>sp|A9KF85|GPDA_COXBN Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Coxiella burnetii
(strain Dugway 5J108-111) GN=gpsA PE=3 SV=1
Length = 332
Score = 34.3 bits (77), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 57/129 (44%), Gaps = 8/129 (6%)
Query: 81 EYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQI 140
E + R + D+KT + + +G L +V T +V GP+ E+A +
Sbjct: 90 EVITRMKPLIDAKTRIAWGTKGLAKGSRLLHEVVATEL-GQVPMAVISGPSLATEVAANL 148
Query: 141 ATAVGPCGNN----RDYLFKLEKAMFDIGHEDDYI-IELANEVRKELGTAEKGILKERKL 195
TAV NN +D + +L F + DD I +EL V+ L A GI KL
Sbjct: 149 PTAVSLASNNSQFSKDLIERLHGQRFRVYKNDDMIGVELCGSVKNILAIA-TGISDGLKL 207
Query: 196 VGSSSRMPL 204
GS++R L
Sbjct: 208 -GSNARAAL 215
>sp|B6IYY5|GPDA_COXB2 Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Coxiella burnetii
(strain CbuG_Q212) GN=gpsA PE=3 SV=1
Length = 332
Score = 34.3 bits (77), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 57/129 (44%), Gaps = 8/129 (6%)
Query: 81 EYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQI 140
E + R + D+KT + + +G L +V T +V GP+ E+A +
Sbjct: 90 EVITRMKPLIDAKTRIAWGTKGLAKGSRLLHEVVATEL-GQVPMAVISGPSLATEVAANL 148
Query: 141 ATAVGPCGNN----RDYLFKLEKAMFDIGHEDDYI-IELANEVRKELGTAEKGILKERKL 195
TAV NN +D + +L F + DD I +EL V+ L A GI KL
Sbjct: 149 PTAVSLASNNSQFSKDLIERLHGQRFRVYKNDDMIGVELCGSVKNILAIA-TGISDGLKL 207
Query: 196 VGSSSRMPL 204
GS++R L
Sbjct: 208 -GSNARAAL 215
>sp|A9N956|GPDA_COXBR Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Coxiella burnetii
(strain RSA 331 / Henzerling II) GN=gpsA PE=3 SV=1
Length = 332
Score = 34.3 bits (77), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 57/129 (44%), Gaps = 8/129 (6%)
Query: 81 EYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQI 140
E + R + D+KT + + +G L +V T +V GP+ E+A +
Sbjct: 90 EVITRMKPLIDAKTRIAWGTKGLAKGSRLLHEVVATEL-GQVPMAVISGPSLATEVAANL 148
Query: 141 ATAVGPCGNN----RDYLFKLEKAMFDIGHEDDYI-IELANEVRKELGTAEKGILKERKL 195
TAV NN +D + +L F + DD I +EL V+ L A GI KL
Sbjct: 149 PTAVSLASNNSQFSKDLIERLHGQRFRVYKNDDMIGVELCGSVKNILAIA-TGISDGLKL 207
Query: 196 VGSSSRMPL 204
GS++R L
Sbjct: 208 -GSNARAAL 215
>sp|B6J4L3|GPDA_COXB1 Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Coxiella burnetii
(strain CbuK_Q154) GN=gpsA PE=3 SV=1
Length = 332
Score = 33.9 bits (76), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 57/129 (44%), Gaps = 8/129 (6%)
Query: 81 EYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQI 140
E + R + D+KT + + +G L +V T +V GP+ E+A +
Sbjct: 90 EVITRMKPLIDAKTRIAWGTKGLAKGSRLLHEVVATEL-GQVPMAVISGPSLATEVAANL 148
Query: 141 ATAVGPCGNN----RDYLFKLEKAMFDIGHEDDYI-IELANEVRKELGTAEKGILKERKL 195
TAV NN +D + +L F + DD I +EL V+ L A GI KL
Sbjct: 149 PTAVSLTSNNSQFSKDLIERLHGQRFRVYKNDDMIGVELCGSVKNILAIA-TGISDGLKL 207
Query: 196 VGSSSRMPL 204
GS++R L
Sbjct: 208 -GSNARAAL 215
>sp|A0RPW7|DNAK_CAMFF Chaperone protein DnaK OS=Campylobacter fetus subsp. fetus (strain
82-40) GN=dnaK PE=3 SV=1
Length = 626
Score = 32.3 bits (72), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 11/73 (15%)
Query: 141 ATAVGPCGNNRDYLFK-LEKAMFDIGHEDDYI---IELANEVRKELGTAEKGILKERKLV 196
A A GP +L K L +A F+ G DD + I NEV K+ G + KG +KE +V
Sbjct: 282 ADATGP-----KHLTKTLSRAKFE-GMIDDLVGETITKINEVVKDAGIS-KGDIKEVVMV 334
Query: 197 GSSSRMPLTKSHI 209
G S+R+PL + +
Sbjct: 335 GGSTRVPLVQEEV 347
>sp|A5IAK9|SYT_LEGPC Threonine--tRNA ligase OS=Legionella pneumophila (strain Corby)
GN=thrS PE=3 SV=1
Length = 637
Score = 32.0 bits (71), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 17/97 (17%)
Query: 79 AMEYLERRECEYDSKTLVD--------FYREGE-------PSQPALTGVIVFTSTPDKVS 123
A++Y + EY +K + D YR+G+ P P+ + F T KV+
Sbjct: 144 AIQYFKSLGEEYKAKIIADIPENEALSLYRQGDFEDLCRGPHVPSTGFLKAFKLT--KVA 201
Query: 124 NKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKA 160
Y+ G + E + R TA + +YLF+LE+A
Sbjct: 202 GAYWRGDSNNEMLQRIYGTAWADKKSLEEYLFRLEEA 238
>sp|P02258|H5_ANSAN Histone H5 OS=Anser anser anser PE=1 SV=1
Length = 193
Score = 31.6 bits (70), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 148 GNNRDYLFKLEKAMFDIGHEDDYIIELANEVRKELGTAEKGILKERKLVGSSSRMPLTK 206
G++R + K K+ + +G D I+LA +R+ L T G+LK+ K VG+S L K
Sbjct: 45 GSSRQSIQKYVKSHYKVGQHADLQIKLA--IRRLLTT---GVLKQTKGVGASGSFRLAK 98
>sp|Q5ZS05|SYT_LEGPH Threonine--tRNA ligase OS=Legionella pneumophila subsp. pneumophila
(strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=thrS
PE=3 SV=2
Length = 637
Score = 31.6 bits (70), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 17/97 (17%)
Query: 79 AMEYLERRECEYDSKTLVD--------FYREGE-------PSQPALTGVIVFTSTPDKVS 123
A++Y + EY +K + D YR+G+ P P+ + F T KV+
Sbjct: 144 AIQYFKDLGEEYKAKIIADIPENEALSLYRQGDFEDLCRGPHVPSTGFLKAFKLT--KVA 201
Query: 124 NKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKA 160
Y+ G + E + R TA + +YLF+LE+A
Sbjct: 202 GAYWRGDSNNEMLQRIYGTAWADKKSLEEYLFRLEEA 238
>sp|Q5X1H3|SYT_LEGPA Threonine--tRNA ligase OS=Legionella pneumophila (strain Paris)
GN=thrS PE=3 SV=1
Length = 637
Score = 31.2 bits (69), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 17/97 (17%)
Query: 79 AMEYLERRECEYDSKTLVD--------FYREGE-------PSQPALTGVIVFTSTPDKVS 123
A++Y + EY +K + D YR+G+ P P+ + F T KV+
Sbjct: 144 AIQYFKGLGEEYKAKIIADIPENEALSLYRQGDFEDLCRGPHVPSTGFLKAFKLT--KVA 201
Query: 124 NKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKA 160
Y+ G + E + R TA + +YLF+LE+A
Sbjct: 202 GAYWRGDSNNEMLQRIYGTAWADKKSLEEYLFRLEEA 238
>sp|P45745|DHBF_BACSU Dimodular nonribosomal peptide synthase OS=Bacillus subtilis (strain
168) GN=dhbF PE=1 SV=4
Length = 2378
Score = 31.2 bits (69), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 157 LEKAMFDIGHEDDYIIELANEVRKELGTAEKGILK---ERKLVGSSSRMPLTKSHIPTLQ 213
++ + F++G L + +R+ +G AE GI K E + G ++ + L +S P LQ
Sbjct: 985 IDDSFFELGGHSLLAARLMSRIREVMG-AELGIAKLFDEPTVAGLAAHLDLAQSACPALQ 1043
Query: 214 LGLRPEAVAM 223
RPE + +
Sbjct: 1044 RAERPEKIPL 1053
>sp|Q9A217|SYL_CAUCR Leucine--tRNA ligase OS=Caulobacter crescentus (strain ATCC 19089 /
CB15) GN=leuS PE=3 SV=1
Length = 861
Score = 31.2 bits (69), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Query: 73 PEKERLAMEYLERRECEYDSKTL-VDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPA 131
P+K RL E R SK L F +GE G+ V+T+ PD + ++G A
Sbjct: 213 PDKVRLMQENWIGR-----SKGLRFKFQFDGEAPDGMAEGLEVYTTRPDTLFGASFVGIA 267
Query: 132 PLEEMARQIATA 143
P +A Q+A A
Sbjct: 268 PEHPLAEQLAAA 279
>sp|B8GW27|SYL_CAUCN Leucine--tRNA ligase OS=Caulobacter crescentus (strain NA1000 /
CB15N) GN=leuS PE=3 SV=1
Length = 861
Score = 31.2 bits (69), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Query: 73 PEKERLAMEYLERRECEYDSKTL-VDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPA 131
P+K RL E R SK L F +GE G+ V+T+ PD + ++G A
Sbjct: 213 PDKVRLMQENWIGR-----SKGLRFKFQFDGEAPDGMAEGLEVYTTRPDTLFGASFVGIA 267
Query: 132 PLEEMARQIATA 143
P +A Q+A A
Sbjct: 268 PEHPLAEQLAAA 279
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.138 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,204,077
Number of Sequences: 539616
Number of extensions: 3921025
Number of successful extensions: 8257
Number of sequences better than 100.0: 30
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 8221
Number of HSP's gapped (non-prelim): 31
length of query: 225
length of database: 191,569,459
effective HSP length: 113
effective length of query: 112
effective length of database: 130,592,851
effective search space: 14626399312
effective search space used: 14626399312
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)