Citrus Sinensis ID: 027276

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-----
Protein Sequence
MVFWVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAMFDIGHEDDYIIELANEVRKELGTAEKGILKERKLVGSSSRMPLTKSHIPTLQLGLRPEAVAMDS
Secondary Structure (PSIPRED)
cEEEEEEccccccccccccccEEEEEEEcEEEccEEccccccccccccccEEEEEEcccccEEEEEEEEEcccHHHHHHHHHHHHHHcccccEEEEEEEcccccccccEEEEEEEEEcccccccccccccccHHHHHHHHHHccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHcccccccHHHHHccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cEEEEEEccEEEEccccccccEEEEEEEccEEEEEEcccccccccccccEEEEEEcccccEEEEEEEEEcccHHHHHHHHHHHHHHHccccEEEEEEEEccccccccccEEEEEEEEcccccccccccccccHHHHHHHHHHHcccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccccccHHHcccccccccccccccccHcccccccEEEEcc
Coil and Loop (DISEMBL)
MVFWVFGygslvwnpgfeydeKILGFIKDYRRVFDLAcidhrgtpqhpartctleksQETICWGvaycvrggpeKERLAMEYLERRECEYDSKTLVDFyregepsqpaltGVIVFtstpdkvsnkyylgpaplEEMARQIATavgpcgnnrdYLFKLEKAMFDIGHEDDYIIELANEVRKELGTAEKGILKERklvgsssrmpltkshiptlqlglrpeavamds
Flexible Loop (DISEMBL)
MVFWVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHrgtpqhpartctleksqetiCWGVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAMFDIGHEDDYIIELANEVRKElgtaekgilkerklvgsssrmpltkshiptlqlglrpeavamds
Low Complexity Region (SEG)
MVFWVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAMFDIGHEDDYIIELANEVRKELGTAEKGILKERKLVGSSSRMPLTKSHIPTLQLGLRPEAVAMDS
Disordered region (IsUnstruct)
*VFWVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAMFDIGHEDDYIIELANEVRKELGTA****************************************
Disordered Region (DISOPRED)
MVFWVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAMFDIGHEDDYIIELANEVR**********************************************
Disordered Region (DISEMBL)
MVFWVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAMFDIGHEDDYIIELANEVRKELGTAEKGILKERKLVGSSSRMPLTKSHIPTLQLGLRPEAVAMDS
Disordered Region (DISPRO)
MVFWVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAMFDIGHEDDYIIELANEVRKELGTAEKGILKE**L*GSSSRMPLTKSHIPTLQLGLRPEAVAMDS
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVFWVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAMFDIGHEDDYIIELANEVRKELGTAEKGILKERKLVGSSSRMPLTKSHIPTLQLGLRPEAVAMDS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	225	2.2.26 [Sep-21-2011]
Q4KMJ1	182	Cation transport regulato	yes	no	0.764	0.945	0.411	2e-29
Q5ZI66	186	Cation transport regulato	yes	no	0.706	0.854	0.445	4e-28
Q5PPV4	184	Cation transport regulato	N/A	no	0.755	0.923	0.424	5e-28
Q8WUX2	184	Cation transport regulato	yes	no	0.764	0.934	0.403	3e-27
Q641Z5	178	Cation transport regulato	yes	no	0.764	0.966	0.397	4e-27
Q9CQG1	178	Cation transport regulato	yes	no	0.764	0.966	0.397	4e-27
B3STU3	222	Cation transport regulato	no	no	0.675	0.684	0.429	5e-25
Q8R3J5	223	Cation transport regulato	no	no	0.675	0.681	0.429	5e-25
Q9BUX1	264	Cation transport regulato	no	no	0.751	0.640	0.384	7e-25
Q5SPB6	196	Cation transport regulato	no	no	0.671	0.770	0.413	1e-23

>sp|Q4KMJ1|CHAC2_DANRE Cation transport regulator-like protein 2 OS=Danio rerio GN=chac2 PE=2 SV=1

 Score =  129 bits (324), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 74/180 (41%), Positives = 98/180 (54%), Gaps = 8/180 (4%)

Query: 3   FWVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETIC 62
            WVFGYGSL+W   F Y++K +GF+K + R F     DHRG P  P R  TL +  E   
Sbjct: 1   MWVFGYGSLIWKVDFPYEDKRVGFVKGFSRRFWQGSTDHRGVPGKPGRVVTLIEDPEGCV 60

Query: 63  WGVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKV 122
           WGVAY +  G E+E    EYL+ RE        V F+ + E  QP    ++   S     
Sbjct: 61  WGVAYKLPSGQEQE--VKEYLDYREKGGYGVITVTFHPKDEQQQPMQDTLLYIGSC---- 114

Query: 123 SNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAMFDIGHE--DDYIIELANEVRK 180
            N  YLGPAPLE +A+QI  +VGP G N DYLF+L  A+  +  E  DD++  L   V++
Sbjct: 115 DNPNYLGPAPLETIAQQIVKSVGPSGKNTDYLFELADALRQLVPEDLDDHLFSLERLVKQ 174

Danio rerio (taxid: 7955)

>sp|Q5ZI66|CHAC2_CHICK Cation transport regulator-like protein 2 OS=Gallus gallus GN=chac2 PE=2 SV=1

 Score =  124 bits (312), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 74/166 (44%), Positives = 93/166 (56%), Gaps = 7/166 (4%)

Query: 3   FWVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETIC 62
            WVFGYGSL+W   F Y EK++G I+ Y R F     DHRG P  P R  TL +  E   
Sbjct: 1   MWVFGYGSLIWKVDFPYQEKMVGRIRGYSRRFWQGSTDHRGVPGKPGRVVTLVEDPEGCV 60

Query: 63  WGVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKV 122
           WGVAY +  G E E  A  YL+ RE      T V FY +    +P    V+++  T D  
Sbjct: 61  WGVAYRLPAGQECEVKA--YLDFREKGGYRTTTVVFYPKDSSIKPF--DVLLYIGTRD-- 114

Query: 123 SNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAMFDIGHED 168
            N  YLGPAPL+E+A QI  AVGP G N +YLF+L  +M ++  ED
Sbjct: 115 -NPNYLGPAPLQEIAEQIIDAVGPSGRNTEYLFELANSMRNLVPED 159

Gallus gallus (taxid: 9031)

>sp|Q5PPV4|CHAC2_XENLA Cation transport regulator-like protein 2 OS=Xenopus laevis GN=chac2 PE=2 SV=1

 Score =  124 bits (311), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 76/179 (42%), Positives = 101/179 (56%), Gaps = 9/179 (5%)

Query: 4   WVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICW 63
           WVFGYGSL+W   F Y EK++G+I  Y R F     DHRG P  P R  TL +  E   W
Sbjct: 2   WVFGYGSLIWKVDFPYVEKLVGYIMCYSRRFWQGSTDHRGVPGKPGRVVTLVEDPEGCVW 61

Query: 64  GVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVS 123
           GVAY +  G E+E  A  YL+ RE      + V FY +    QP    V+++  T D   
Sbjct: 62  GVAYRLPEGKEEEVKA--YLDFREKGGYRTSTVVFYPKDPSIQP--FNVLLYIGTCD--- 114

Query: 124 NKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAMFDIGHE--DDYIIELANEVRK 180
           N  YLGPAPLE++A QI  AVGP G N +YLF+L  ++ ++  E  D+++  L   VR+
Sbjct: 115 NPNYLGPAPLEDIAEQILNAVGPSGRNTEYLFELANSLRNLVPEDADEHLFSLEKLVRQ 173

Xenopus laevis (taxid: 8355)

>sp|Q8WUX2|CHAC2_HUMAN Cation transport regulator-like protein 2 OS=Homo sapiens GN=CHAC2 PE=2 SV=1

 Score =  121 bits (304), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 73/181 (40%), Positives = 102/181 (56%), Gaps = 9/181 (4%)

Query: 4   WVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICW 63
           WVFGYGSL+W   F Y +K++G+I +Y R F     DHRG P  P R  TL +      W
Sbjct: 2   WVFGYGSLIWKVDFPYQDKLVGYITNYSRRFWQGSTDHRGVPGKPGRVVTLVEDPAGCVW 61

Query: 64  GVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVS 123
           GVAY +  G E+E  A  YL+ RE      T V FY +   ++P    V+++  T D   
Sbjct: 62  GVAYRLPVGKEEEVKA--YLDFREKGGYRTTTVIFYPKDPTTKPF--SVLLYIGTCD--- 114

Query: 124 NKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAMFDIGHE--DDYIIELANEVRKE 181
           N  YLGPAPLE++A QI  A GP G N +YLF+L  ++ ++  E  D+++  L   V++ 
Sbjct: 115 NPDYLGPAPLEDIAEQIFNAAGPSGRNTEYLFELANSIRNLVPEEADEHLFALEKLVKER 174

Query: 182 L 182
           L
Sbjct: 175 L 175

Homo sapiens (taxid: 9606)

>sp|Q641Z5|CHAC2_RAT Cation transport regulator-like protein 2 OS=Rattus norvegicus GN=Chac2 PE=2 SV=1

 Score =  121 bits (303), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 72/181 (39%), Positives = 100/181 (55%), Gaps = 9/181 (4%)

Query: 4   WVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICW 63
           WVFGYGSL+W   F Y +K++G+I +Y R F     DHRG P  P R  TL +      W
Sbjct: 2   WVFGYGSLIWKVDFPYQDKLVGYITNYSRRFWQGSTDHRGVPGKPGRVVTLVEDPGGSVW 61

Query: 64  GVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVS 123
           GVAY +  G E+E     YL+ RE      T V FY +   ++P    V+++  T D   
Sbjct: 62  GVAYKLPVGKEEE--VKTYLDFREKGGYRTTTVIFYPKDSTTKPF--SVLLYIGTCD--- 114

Query: 124 NKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAMFDIGHE--DDYIIELANEVRKE 181
           N  YLGPAPLE++A QI  A GP G N +YLF+L  ++  +  E  D+++  L   V++ 
Sbjct: 115 NPNYLGPAPLEDIAEQIFNAAGPSGRNTEYLFELADSIRKLVPEDADEHLFSLEKLVKER 174

Query: 182 L 182
           L
Sbjct: 175 L 175

Rattus norvegicus (taxid: 10116)

>sp|Q9CQG1|CHAC2_MOUSE Cation transport regulator-like protein 2 OS=Mus musculus GN=Chac2 PE=2 SV=1

 Score =  121 bits (303), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 72/181 (39%), Positives = 100/181 (55%), Gaps = 9/181 (4%)

Query: 4   WVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICW 63
           WVFGYGSL+W   F Y +K++G+I +Y R F     DHRG P  P R  TL +      W
Sbjct: 2   WVFGYGSLIWKVDFPYQDKLVGYITNYSRRFWQGSTDHRGVPGKPGRVVTLVEDPGGSVW 61

Query: 64  GVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVS 123
           GVAY +  G E+E     YL+ RE      T V FY +   ++P    V+++  T D   
Sbjct: 62  GVAYKLPVGKEEE--VKTYLDFREKGGYRTTTVIFYPKDSTTKPF--SVLLYIGTCD--- 114

Query: 124 NKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAMFDIGHE--DDYIIELANEVRKE 181
           N  YLGPAPLE++A QI  A GP G N +YLF+L  ++  +  E  D+++  L   V++ 
Sbjct: 115 NPNYLGPAPLEDIAEQIFNAAGPSGRNTEYLFELADSVRKLVPEDADEHLFSLEKLVKER 174

Query: 182 L 182
           L
Sbjct: 175 L 175

Mus musculus (taxid: 10090)

>sp|B3STU3|CHAC1_RAT Cation transport regulator-like protein 1 OS=Rattus norvegicus GN=Chac1 PE=2 SV=1

 Score =  114 bits (285), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 70/163 (42%), Positives = 90/163 (55%), Gaps = 11/163 (6%)

Query: 2   VFWVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETI 61
             W+FGYGSLVW P F Y +  +GF++ Y R F      HRG+ + P R  TL +  E  
Sbjct: 32  ALWIFGYGSLVWKPDFAYSDSRVGFVRGYSRRFWQGDTFHRGSDKMPGRVVTLLEDHEGC 91

Query: 62  CWGVAYCVRGGPEKERLAMEYLERREC---EYDSKTLVDFYREGEPSQPALTGVIVFTST 118
            WGVAY VRG  E+   A++YL  RE     YD+K  V FY +  P QP LT  + + +T
Sbjct: 92  TWGVAYQVRG--EQVSEALKYLNVREAVLGGYDTKE-VTFYPQDTPDQP-LT-ALAYVAT 146

Query: 119 PDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAM 161
           P    N  YLGPAP E +A QI    G  G+N +YL +L   M
Sbjct: 147 P---QNPGYLGPAPEEVIATQILACRGFSGHNLEYLLRLADFM 186

Negative regulator of Notch signaling pathway involved in embryonic neurogenesis: acts by inhibiting Notch cleavage by furin, maintaining Notch in an immature inactive form, thereby promoting neurogenesis in embryos. May also act as a pro-apoptotic component of the unfolded protein response pathway by mediating the pro-apoptotic effects of the ATF4-ATF3-DDIT3/CHOP cascade.

Rattus norvegicus (taxid: 10116)

>sp|Q8R3J5|CHAC1_MOUSE Cation transport regulator-like protein 1 OS=Mus musculus GN=Chac1 PE=1 SV=2

 Score =  114 bits (285), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 70/163 (42%), Positives = 91/163 (55%), Gaps = 11/163 (6%)

Query: 2   VFWVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETI 61
             W+FGYGSLVW P F Y +  +GF++ Y R F      HRG+ + P R  TL + +E  
Sbjct: 33  ALWIFGYGSLVWKPDFAYSDSRVGFVRGYSRRFWQGDTFHRGSDKMPGRVVTLLEDREGC 92

Query: 62  CWGVAYCVRGGPEKERLAMEYLERREC---EYDSKTLVDFYREGEPSQPALTGVIVFTST 118
            WGVAY VRG  E+   A++YL  RE     YD+K  V FY +  P QP LT  + + +T
Sbjct: 93  TWGVAYQVRG--EQVNEALKYLNVREAVLGGYDTKE-VTFYPQDTPDQP-LT-ALAYVAT 147

Query: 119 PDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAM 161
           P    N  YLGPAP E +A QI    G  G+N +YL +L   M
Sbjct: 148 P---QNPGYLGPAPEEVIATQILACRGFSGHNLEYLLRLADFM 187

Negative regulator of Notch signaling pathway involved in embryonic neurogenesis: acts by inhibiting Notch cleavage by furin, maintaining Notch in an immature inactive form, thereby promoting neurogenesis in embryos. May also act as a pro-apoptotic component of the unfolded protein response pathway by mediating the pro-apoptotic effects of the ATF4-ATF3-DDIT3/CHOP cascade.

Mus musculus (taxid: 10090)

>sp|Q9BUX1|CHAC1_HUMAN Cation transport regulator-like protein 1 OS=Homo sapiens GN=CHAC1 PE=1 SV=2

 Score =  114 bits (284), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 70/182 (38%), Positives = 97/182 (53%), Gaps = 13/182 (7%)

Query: 2   VFWVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETI 61
             W+FGYGSLVW P F Y +  +GF++ Y R F      HRG+ + P R  TL +  E  
Sbjct: 74  ALWIFGYGSLVWRPDFAYSDSRVGFVRGYSRRFWQGDTFHRGSDKMPGRVVTLLEDHEGC 133

Query: 62  CWGVAYCVRGGPEKERLAMEYLERREC---EYDSKTLVDFYREGEPSQPALTGVIVFTST 118
            WGVAY V+G  E+   A++YL  RE     YD+K  V FY +  P QP     + + +T
Sbjct: 134 TWGVAYQVQG--EQVSKALKYLNVREAVLGGYDTKE-VTFYPQDAPDQP--LKALAYVAT 188

Query: 119 PDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAMFDIG--HEDDYIIELAN 176
           P    N  YLGPAP E +A QI    G  G+N +YL +L   M   G   +D+++  + +
Sbjct: 189 P---QNPGYLGPAPEEAIATQILACRGFSGHNLEYLLRLADFMQLCGPQAQDEHLAAIVD 245

Query: 177 EV 178
            V
Sbjct: 246 AV 247

Negative regulator of Notch signaling pathway involved in embryonic neurogenesis: acts by inhibiting Notch cleavage by furin, maintaining Notch in an immature inactive form, thereby promoting neurogenesis in embryos. May also act as a pro-apoptotic component of the unfolded protein response pathway by mediating the pro-apoptotic effects of the ATF4-ATF3-DDIT3/CHOP cascade.

Homo sapiens (taxid: 9606)

>sp|Q5SPB6|CHAC1_DANRE Cation transport regulator-like protein 1 OS=Danio rerio GN=chac1 PE=2 SV=1

 Score =  109 bits (273), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 67/162 (41%), Positives = 91/162 (56%), Gaps = 11/162 (6%)

Query: 3   FWVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETIC 62
            W+FGYGSLVW P F+Y    +G+IK Y+R F      HRG  + P R  TL +  +   
Sbjct: 13  LWIFGYGSLVWKPDFKYKRSKVGYIKGYKRRFWHGDNFHRGDDEMPGRVVTLIEEDDVCT 72

Query: 63  WGVAYCVRGGPEKERLAMEYLERREC---EYDSKTLVDFYREGEPSQPALTGVIVFTSTP 119
           WGVA+ V G   +E L  +YL  RE     Y ++  VDF+  G  +QP +   +V+ +TP
Sbjct: 73  WGVAFEVTGSQMEESL--KYLNVREAVRGGYLTRA-VDFFPRGT-NQPPVQA-LVYIATP 127

Query: 120 DKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAM 161
           D   N  YLGPA  EE+A QIA   G  G+N +YL +L + M
Sbjct: 128 D---NPIYLGPASTEEIASQIAVCKGNSGHNIEYLLRLAEFM 166

Negative regulator of Notch signaling pathway involved in embryonic neurogenesis: acts by inhibiting Notch cleavage by furin, maintaining Notch in an immature inactive form, thereby promoting neurogenesis in embryos. May also act as a pro-apoptotic component of the unfolded protein response pathway.

Danio rerio (taxid: 7955)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	225
296081797	264	unnamed protein product [Vitis vinifera]	0.986	0.840	0.782	1e-103
225429852	222	PREDICTED: cation transport regulator-li	0.986	1.0	0.782	1e-103
118487066	223	unknown [Populus trichocarpa]	0.991	1.0	0.804	1e-102
118488975	223	unknown [Populus trichocarpa x Populus d	0.991	1.0	0.8	1e-102
224115702	223	predicted protein [Populus trichocarpa]	0.991	1.0	0.791	1e-101
224121448	223	predicted protein [Populus trichocarpa]	0.991	1.0	0.8	1e-101
255574161	223	Cation transport protein chaC, putative	0.991	1.0	0.791	1e-101
449511957	224	PREDICTED: cation transport regulator-li	0.995	1.0	0.737	9e-96
82623379	231	ChaC-like family protein-like [Solanum t	0.982	0.956	0.753	2e-95
363808088	224	uncharacterized protein LOC100778704 [Gl	0.991	0.995	0.745	1e-94

>gi|296081797|emb|CBI20802.3| unnamed protein product [Vitis vinifera]

 Score =  380 bits (975), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 176/225 (78%), Positives = 197/225 (87%), Gaps = 3/225 (1%)

Query: 1   MVFWVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQET 60
           MV WVFGYGSLVWNPGF+YDEK++GFIKDY+RVFDLACIDHRGTP+HPARTCTLE+S+  
Sbjct: 43  MVLWVFGYGSLVWNPGFDYDEKVIGFIKDYKRVFDLACIDHRGTPEHPARTCTLEQSEGA 102

Query: 61  ICWGVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPD 120
           ICWG A+CVRGGPEKERLAMEYLERRECEYD KTLVDFY+EG  S PALTG+IVFTSTPD
Sbjct: 103 ICWGAAFCVRGGPEKERLAMEYLERRECEYDCKTLVDFYKEGNTSAPALTGIIVFTSTPD 162

Query: 121 KVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAMFDIGHEDDYIIELANEVRK 180
           KVSNKYYLGPAPLE+MARQIATAVGPCGNNRDYLF LEKAMFDIGHEDD +IELA+EVRK
Sbjct: 163 KVSNKYYLGPAPLEDMARQIATAVGPCGNNRDYLFLLEKAMFDIGHEDDMVIELASEVRK 222

Query: 181 ELGTAEKGILKERKLVGSSSRMPLTKSHIPTLQLGLRPEAVAMDS 225
            LG   KG +KE+KLVG    +P   +H+  +QL L PE + +DS
Sbjct: 223 VLGMVGKGSVKEKKLVGLPHLLP---AHMSAIQLHLLPEVITLDS 264

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225429852|ref|XP_002283203.1| PREDICTED: cation transport regulator-like protein 2 isoform 1 [Vitis vinifera]

 Score =  378 bits (971), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 176/225 (78%), Positives = 197/225 (87%), Gaps = 3/225 (1%)

Query: 1   MVFWVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQET 60
           MV WVFGYGSLVWNPGF+YDEK++GFIKDY+RVFDLACIDHRGTP+HPARTCTLE+S+  
Sbjct: 1   MVLWVFGYGSLVWNPGFDYDEKVIGFIKDYKRVFDLACIDHRGTPEHPARTCTLEQSEGA 60

Query: 61  ICWGVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPD 120
           ICWG A+CVRGGPEKERLAMEYLERRECEYD KTLVDFY+EG  S PALTG+IVFTSTPD
Sbjct: 61  ICWGAAFCVRGGPEKERLAMEYLERRECEYDCKTLVDFYKEGNTSAPALTGIIVFTSTPD 120

Query: 121 KVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAMFDIGHEDDYIIELANEVRK 180
           KVSNKYYLGPAPLE+MARQIATAVGPCGNNRDYLF LEKAMFDIGHEDD +IELA+EVRK
Sbjct: 121 KVSNKYYLGPAPLEDMARQIATAVGPCGNNRDYLFLLEKAMFDIGHEDDMVIELASEVRK 180

Query: 181 ELGTAEKGILKERKLVGSSSRMPLTKSHIPTLQLGLRPEAVAMDS 225
            LG   KG +KE+KLVG    +P   +H+  +QL L PE + +DS
Sbjct: 181 VLGMVGKGSVKEKKLVGLPHLLP---AHMSAIQLHLLPEVITLDS 222

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118487066|gb|ABK95363.1| unknown [Populus trichocarpa]

 Score =  377 bits (969), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 181/225 (80%), Positives = 194/225 (86%), Gaps = 2/225 (0%)

Query: 1   MVFWVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQET 60
           MVFWVFGYGSLVWNPGFEYDEK++GFIKDYRRVFDLACIDHRGTP+ PARTCTLE  +  
Sbjct: 1   MVFWVFGYGSLVWNPGFEYDEKVIGFIKDYRRVFDLACIDHRGTPESPARTCTLENVEGA 60

Query: 61  ICWGVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPD 120
           ICWG AYCVRGGPE+ERLAMEYLERRECEYD KTLVDFY+EGEPS+PALTGVIVFTSTPD
Sbjct: 61  ICWGAAYCVRGGPERERLAMEYLERRECEYDKKTLVDFYKEGEPSEPALTGVIVFTSTPD 120

Query: 121 KVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAMFDIGHEDDYIIELANEVRK 180
           KVSNKYYLGPAPLEEMARQIATA GPCGNNRDYLF LE+AMF IGHEDD +IELA EVR+
Sbjct: 121 KVSNKYYLGPAPLEEMARQIATAHGPCGNNRDYLFSLERAMFAIGHEDDTVIELAKEVRR 180

Query: 181 ELGTAEKGILKERKLVGSSSRMPLTKSHIPTLQLGLRPEAVAMDS 225
            LGT   GI  E+K+ GSS      KSH+P LQL    EAV MDS
Sbjct: 181 VLGTKGNGIPVEKKISGSSP--AALKSHMPALQLRSLQEAVVMDS 223

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118488975|gb|ABK96295.1| unknown [Populus trichocarpa x Populus deltoides]

 Score =  375 bits (964), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 180/225 (80%), Positives = 193/225 (85%), Gaps = 2/225 (0%)

Query: 1   MVFWVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQET 60
           MVFW+FGYGSLVWNPGFEYDEK++GFIKDYRRVFDLACIDHRGTP+ PARTCTLE  +  
Sbjct: 1   MVFWIFGYGSLVWNPGFEYDEKVIGFIKDYRRVFDLACIDHRGTPESPARTCTLENVEGA 60

Query: 61  ICWGVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPD 120
           ICWG AYCVRGGPE+ERLAMEYLERRECEYD KTLVDFY+EGEP QPALTGVIVFTSTPD
Sbjct: 61  ICWGAAYCVRGGPERERLAMEYLERRECEYDKKTLVDFYKEGEPLQPALTGVIVFTSTPD 120

Query: 121 KVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAMFDIGHEDDYIIELANEVRK 180
           KVSNKYYLGPAPL EMARQIATA GPCGNNRDYLF LEKAMF IGHEDD +IELA EVRK
Sbjct: 121 KVSNKYYLGPAPLVEMARQIATAHGPCGNNRDYLFLLEKAMFAIGHEDDMVIELAKEVRK 180

Query: 181 ELGTAEKGILKERKLVGSSSRMPLTKSHIPTLQLGLRPEAVAMDS 225
            LG    GI  E+K+ G+S +    KSH+P LQL    EAVAMDS
Sbjct: 181 VLGITGNGIPTEKKITGTSPKA--LKSHMPVLQLRPLQEAVAMDS 223

Source: Populus trichocarpa x Populus deltoides

Species: Populus trichocarpa x Populus deltoides

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224115702|ref|XP_002332121.1| predicted protein [Populus trichocarpa] gi|222874941|gb|EEF12072.1| predicted protein [Populus trichocarpa]

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 178/225 (79%), Positives = 194/225 (86%), Gaps = 2/225 (0%)

Query: 1   MVFWVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQET 60
           MVFW+FGYGSLVWNPGFEYDEK++GFIKDYRRVFDLACIDHRGTP+ PARTCTLE  +  
Sbjct: 1   MVFWIFGYGSLVWNPGFEYDEKVIGFIKDYRRVFDLACIDHRGTPESPARTCTLENVEGA 60

Query: 61  ICWGVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPD 120
           ICWG AYCVRGGPE+ERLAMEYLERRECEYD KTLVDFY+EGEPSQPALTGVIVFTSTPD
Sbjct: 61  ICWGAAYCVRGGPERERLAMEYLERRECEYDKKTLVDFYKEGEPSQPALTGVIVFTSTPD 120

Query: 121 KVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAMFDIGHEDDYIIELANEVRK 180
           +VSNKYYLGPAPLEEMARQIATA GPCGNNRDYLF LEKAMF IGHED+ +IELA EVRK
Sbjct: 121 QVSNKYYLGPAPLEEMARQIATAHGPCGNNRDYLFLLEKAMFAIGHEDEMVIELAKEVRK 180

Query: 181 ELGTAEKGILKERKLVGSSSRMPLTKSHIPTLQLGLRPEAVAMDS 225
            LG    GI  E+K+ G+S +  +  SH+P LQL    EAV MDS
Sbjct: 181 VLGITGNGIPTEKKITGTSPKALI--SHMPVLQLRPLQEAVVMDS 223

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224121448|ref|XP_002330830.1| predicted protein [Populus trichocarpa] gi|222872632|gb|EEF09763.1| predicted protein [Populus trichocarpa]

 Score =  374 bits (959), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 180/225 (80%), Positives = 193/225 (85%), Gaps = 2/225 (0%)

Query: 1   MVFWVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQET 60
           MVFWVFGYGSLVWNPGFEYDEK++GFIKDYRRVFDLACIDHRGTP+ PARTCTLE  +  
Sbjct: 1   MVFWVFGYGSLVWNPGFEYDEKVIGFIKDYRRVFDLACIDHRGTPESPARTCTLENVEGA 60

Query: 61  ICWGVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPD 120
           ICWG AYCVRGGPE+ERLAMEYLERRECEYD KTLVDF +EGEPS+PALTGVIVFTSTPD
Sbjct: 61  ICWGAAYCVRGGPERERLAMEYLERRECEYDKKTLVDFDKEGEPSEPALTGVIVFTSTPD 120

Query: 121 KVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAMFDIGHEDDYIIELANEVRK 180
           KVSNKYYLGPAPLEEMARQIATA GPCGNNRDYLF LE+AMF IGHEDD +IELA EVR+
Sbjct: 121 KVSNKYYLGPAPLEEMARQIATAHGPCGNNRDYLFSLERAMFAIGHEDDTVIELAKEVRR 180

Query: 181 ELGTAEKGILKERKLVGSSSRMPLTKSHIPTLQLGLRPEAVAMDS 225
            LGT   GI  E+K+ GSS      KSH+P LQL    EAV MDS
Sbjct: 181 VLGTKGNGIPVEKKISGSSPAA--LKSHMPALQLRSLQEAVVMDS 223

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255574161|ref|XP_002527996.1| Cation transport protein chaC, putative [Ricinus communis] gi|223532622|gb|EEF34408.1| Cation transport protein chaC, putative [Ricinus communis]

 Score =  373 bits (958), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 178/225 (79%), Positives = 196/225 (87%), Gaps = 2/225 (0%)

Query: 1   MVFWVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQET 60
           MVFWVFGYGSLVWNPGF+YD+KI+GF+KD RRVFDLACIDHRGTP  PARTCTLE  +  
Sbjct: 1   MVFWVFGYGSLVWNPGFQYDDKIIGFVKDCRRVFDLACIDHRGTPDRPARTCTLEFVEGA 60

Query: 61  ICWGVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPD 120
           +CWG AYCVRGGPE+ERLA+EYLERRECEYD K+LVDFY+EGE SQPALTGVIVFTSTPD
Sbjct: 61  VCWGAAYCVRGGPERERLAIEYLERRECEYDKKSLVDFYKEGETSQPALTGVIVFTSTPD 120

Query: 121 KVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAMFDIGHEDDYIIELANEVRK 180
           K+SNKYYLGPAPLEEMARQIATA GPCGNNRDYLF LEKA+F+IGHEDD +IELANEVRK
Sbjct: 121 KISNKYYLGPAPLEEMARQIATAYGPCGNNRDYLFLLEKALFNIGHEDDMVIELANEVRK 180

Query: 181 ELGTAEKGILKERKLVGSSSRMPLTKSHIPTLQLGLRPEAVAMDS 225
            LG   KGI KE+KL G S      KS++P LQL L PEAVA+DS
Sbjct: 181 VLGIVGKGIPKEKKLAGPSHIA--LKSNMPALQLRLLPEAVALDS 223

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449511957|ref|XP_004164100.1| PREDICTED: cation transport regulator-like protein 2-like [Cucumis sativus]

 Score =  355 bits (911), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 166/225 (73%), Positives = 193/225 (85%), Gaps = 1/225 (0%)

Query: 1   MVFWVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQET 60
           MVFWVFGYGSLVWNPGFE+DEKI+G+IKDY+RVFDLACIDHRGTP++PART TLE+ +  
Sbjct: 1   MVFWVFGYGSLVWNPGFEFDEKIIGYIKDYKRVFDLACIDHRGTPENPARTLTLEQEEGA 60

Query: 61  ICWGVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPD 120
           ICWG AYCVRG PE+ER AMEYLE RECEYD KTLV+FY+E    +PALTGVIVFTSTPD
Sbjct: 61  ICWGAAYCVRGTPERERAAMEYLEHRECEYDQKTLVNFYKEENSIEPALTGVIVFTSTPD 120

Query: 121 KVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAMFDIGHEDDYIIELANEVRK 180
           K  NKYYLGPAPLE+MARQIATAVGPCGNNRDY+F LEKA+F+IGHE++ +IELANEVRK
Sbjct: 121 KEVNKYYLGPAPLEDMARQIATAVGPCGNNRDYIFMLEKALFNIGHEEEMVIELANEVRK 180

Query: 181 ELGTAEKGILKERKLVGSSSRMPLTKSHIPTLQLGLRPEAVAMDS 225
            L   E GI +E KL+G++  + L KSHI +L+L L PEA+A DS
Sbjct: 181 VLDLLENGISRENKLLGAAPHIVL-KSHIASLELQLLPEAIATDS 224

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|82623379|gb|ABB87104.1| ChaC-like family protein-like [Solanum tuberosum]

 Score =  354 bits (908), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 168/223 (75%), Positives = 191/223 (85%), Gaps = 2/223 (0%)

Query: 1   MVFWVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQET 60
           MVFW+FGYGSLVWNPGFEYDEK++G+IKDY+RVFDLACIDHRGTP+HPARTCTLE+S+  
Sbjct: 1   MVFWIFGYGSLVWNPGFEYDEKMIGYIKDYKRVFDLACIDHRGTPEHPARTCTLEESEGA 60

Query: 61  ICWGVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPD 120
           ICWG  YCVRGGPEKE+ AMEYLERRECEYDSKTLVDFY + + +QPALTGVIVFTSTPD
Sbjct: 61  ICWGAVYCVRGGPEKEKKAMEYLERRECEYDSKTLVDFYTDEDSAQPALTGVIVFTSTPD 120

Query: 121 KVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAMFDIGHEDDYIIELANEVRK 180
           KV+NKYYLGPAPLEEMA QIATA GPCGNNR+Y+FK+EKA++DI HEDDYIIELANEVRK
Sbjct: 121 KVNNKYYLGPAPLEEMAWQIATAHGPCGNNREYIFKMEKALYDIDHEDDYIIELANEVRK 180

Query: 181 ELGTAEKGILKERKLVGSSSRMPLTKSHIPTLQLGLRPEAVAM 223
            L     GI KE++L+G SS +PL     P     L PEA A+
Sbjct: 181 VLEIVGAGIQKEKELLG-SSHIPLKTQTSPVKIFSL-PEASAV 221

Source: Solanum tuberosum

Species: Solanum tuberosum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363808088|ref|NP_001242728.1| uncharacterized protein LOC100778704 [Glycine max] gi|255634977|gb|ACU17847.1| unknown [Glycine max]

 Score =  351 bits (901), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 167/224 (74%), Positives = 190/224 (84%), Gaps = 1/224 (0%)

Query: 1   MVFWVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQET 60
           MVFWVFGYGSLVWNPGF+Y+EKI+GFIKDYRRVFDLACIDHRGTP++PARTCTLE+ +  
Sbjct: 1   MVFWVFGYGSLVWNPGFDYNEKIIGFIKDYRRVFDLACIDHRGTPENPARTCTLEEKEGA 60

Query: 61  ICWGVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPD 120
           ICWG AYCVRGGPEKE+LAM+YLERRECE D KTLV+F++EG+   P LT VIVFTSTPD
Sbjct: 61  ICWGAAYCVRGGPEKEKLAMQYLERRECECDRKTLVNFFKEGDSLHPTLTDVIVFTSTPD 120

Query: 121 KVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAMFDIGHEDDYIIELANEVRK 180
           KV+NKYYLGPAPLE+MARQIATA GPCGNNRDY+F LEKAM+DIGHEDD +IELANEVRK
Sbjct: 121 KVNNKYYLGPAPLEDMARQIATAYGPCGNNRDYIFLLEKAMYDIGHEDDLVIELANEVRK 180

Query: 181 ELGTAEKGILKERKLVGSSSRMPLTKSHIPTLQLGLRPEAVAMD 224
            LG     + KE+KLVG++         IPTLQL   PE +AMD
Sbjct: 181 VLGMGNV-VPKEKKLVGAAQLPHPPHVTIPTLQLHPLPEPIAMD 223

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	225
TAIR|locus:2128096	227	AT4G31290 "AT4G31290" [Arabido	0.977	0.969	0.756	1.7e-89
TAIR|locus:2179714	216	AT5G26220 "AT5G26220" [Arabido	0.928	0.967	0.748	3.7e-87
TAIR|locus:2194854	199	AT1G44790 "AT1G44790" [Arabido	0.826	0.934	0.518	1.5e-49
ZFIN|ZDB-GENE-050706-146	182	chac2 "ChaC, cation transport	0.76	0.939	0.413	4.9e-30
UNIPROTKB|Q8WUX2	184	CHAC2 "Cation transport regula	0.764	0.934	0.403	3.1e-28
MGI|MGI:1915294	178	Chac2 "ChaC, cation transport	0.764	0.966	0.397	6.4e-28
MGI|MGI:1916315	223	Chac1 "ChaC, cation transport	0.742	0.748	0.405	3.2e-26
RGD|1307153	222	Chac1 "ChaC, cation transport	0.742	0.752	0.405	5.2e-26
UNIPROTKB|Q9BUX1	264	CHAC1 "Cation transport regula	0.742	0.632	0.388	1.8e-25
UNIPROTKB|A6H738	219	CHAC1 "Uncharacterized protein	0.742	0.762	0.388	2.2e-25

TAIR|locus:2128096 AT4G31290 "AT4G31290" [Arabidopsis thaliana (taxid:3702)]

 Score = 893 (319.4 bits), Expect = 1.7e-89, P = 1.7e-89
 Identities = 171/226 (75%), Positives = 191/226 (84%)

Query:     1 MVFWVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQET 60
             MV WVFGYGSLVWNPGF YDEK+LGFIK Y+RVFDLACIDHRGTP+HPARTCTLEK++E 
Sbjct:     1 MVMWVFGYGSLVWNPGFHYDEKVLGFIKGYKRVFDLACIDHRGTPEHPARTCTLEKAEEA 60

Query:    61 ICWGVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPD 120
             ICWG A+CVRGGPEKERLAMEYLERRECEYD KT VDFY+E +P +PA+TGVIVFTSTPD
Sbjct:    61 ICWGTAFCVRGGPEKERLAMEYLERRECEYDLKTSVDFYKEDDPLKPAVTGVIVFTSTPD 120

Query:   121 KVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAMFDIGHEDDYIIELANEVRK 180
             KVSNKYYLGPAPLE+MARQIATA GPCGNNRDYLF LEKAM DIGHE+DY+IELANEVRK
Sbjct:   121 KVSNKYYLGPAPLEDMARQIATANGPCGNNRDYLFLLEKAMHDIGHEEDYVIELANEVRK 180

Query:   181 ELGTAEKGILKERKLVGS-SSRMP-LTKSHIPTLQ--LGLRPEAVA 222
              L  AE    K   +  S +SR+   +K+++PT    L   PEAVA
Sbjct:   181 VL--AESSTKKVTPVKESRASRVANKSKNNVPTAHQILPHHPEAVA 224

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2179714 AT5G26220 "AT5G26220" [Arabidopsis thaliana (taxid:3702)]

 Score = 871 (311.7 bits), Expect = 3.7e-87, P = 3.7e-87
 Identities = 161/215 (74%), Positives = 185/215 (86%)

Query:     1 MVFWVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQET 60
             MV WVFGYGSL+WNPGF++DEK++G+IKDY+RVFDLACIDHRGTP+HPARTCTLE+S   
Sbjct:     1 MVLWVFGYGSLIWNPGFDFDEKLIGYIKDYKRVFDLACIDHRGTPEHPARTCTLEQSTGA 60

Query:    61 ICWGVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPD 120
             ICWG AYCVRGGPEKE+LAMEYLERRECEYDSKTLV+FY E + S P +TGVIVFTSTPD
Sbjct:    61 ICWGAAYCVRGGPEKEKLAMEYLERRECEYDSKTLVEFYTENDTSTPIVTGVIVFTSTPD 120

Query:   121 KVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAMFDIGHEDDYIIELANEVRK 180
             KVSNKYYLGPAPLEEMARQIATA GPCGNNR+YLFKLEKAMFDI HE++Y+IELANEVRK
Sbjct:   121 KVSNKYYLGPAPLEEMARQIATASGPCGNNREYLFKLEKAMFDIEHEEEYVIELANEVRK 180

Query:   181 ELGTAE--KGILKERKLVGSSSRMPLTKSHIPTLQ 213
             +L   E  K +LK   +V   S    +++H+ T Q
Sbjct:   181 QLDLPEEVKALLKP--IVSHVSVK--SQAHVSTRQ 211

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0010288 "response to lead ion" evidence=IEP

GO:0046686 "response to cadmium ion" evidence=IEP

TAIR|locus:2194854 AT1G44790 "AT1G44790" [Arabidopsis thaliana (taxid:3702)]

 Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
 Identities = 97/187 (51%), Positives = 129/187 (68%)

Query:     1 MVFWVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQET 60
             M  WVFGYGSL+W  GF +DE + GFIK YRRVF     DHRGTP  P RT TLE + E 
Sbjct:     1 MAMWVFGYGSLIWKTGFPFDESLPGFIKGYRRVFHQGSTDHRGTPDFPGRTVTLEAAHEE 60

Query:    61 ICWGVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPD 120
             +C GVAY +    +K R A+ +LE RE +YD K  +DF+ +   S+PA+ GV+V+ ++PD
Sbjct:    61 VCCGVAYKITKEEDK-RDALLHLEVREKQYDQKEYLDFFTDSNASEPAVAGVMVYIASPD 119

Query:   121 KVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAMFDIGHEDDYIIELANEVRK 180
             K SN  YLGPAPLE++A+QI  A GP G NRDYLF LE+A+  +G +D ++ +LAN+VR 
Sbjct:   120 KKSNNNYLGPAPLEDIAKQIVKAKGPSGPNRDYLFNLEEALAQLGFKDKHVTDLANQVRH 179

Query:   181 ELGTAEK 187
              L  +E+
Sbjct:   180 ILSESEE 186

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005829 "cytosol" evidence=IDA

ZFIN|ZDB-GENE-050706-146 chac2 "ChaC, cation transport regulator homolog 2 (E. coli)" [Danio rerio (taxid:7955)]

 Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
 Identities = 74/179 (41%), Positives = 101/179 (56%)

Query:     4 WVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICW 63
             WVFGYGSL+W   F Y++K +GF+K + R F     DHRG P  P R  TL +  E   W
Sbjct:     2 WVFGYGSLIWKVDFPYEDKRVGFVKGFSRRFWQGSTDHRGVPGKPGRVVTLIEDPEGCVW 61

Query:    64 GVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVS 123
             GVAY +  G E+E    EYL+ RE        V F+ + E  QP +   +++  + D   
Sbjct:    62 GVAYKLPSGQEQE--VKEYLDYREKGGYGVITVTFHPKDEQQQP-MQDTLLYIGSCD--- 115

Query:   124 NKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAMFDIGHED--DYIIELANEVRK 180
             N  YLGPAPLE +A+QI  +VGP G N DYLF+L  A+  +  ED  D++  L   V++
Sbjct:   116 NPNYLGPAPLETIAQQIVKSVGPSGKNTDYLFELADALRQLVPEDLDDHLFSLERLVKQ 174

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|Q8WUX2 CHAC2 "Cation transport regulator-like protein 2" [Homo sapiens (taxid:9606)]

 Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
 Identities = 73/181 (40%), Positives = 102/181 (56%)

Query:     4 WVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICW 63
             WVFGYGSL+W   F Y +K++G+I +Y R F     DHRG P  P R  TL +      W
Sbjct:     2 WVFGYGSLIWKVDFPYQDKLVGYITNYSRRFWQGSTDHRGVPGKPGRVVTLVEDPAGCVW 61

Query:    64 GVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVS 123
             GVAY +  G E+E  A  YL+ RE      T V FY +   ++P    V+++  T D   
Sbjct:    62 GVAYRLPVGKEEEVKA--YLDFREKGGYRTTTVIFYPKDPTTKPF--SVLLYIGTCD--- 114

Query:   124 NKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAMFDIGHE--DDYIIELANEVRKE 181
             N  YLGPAPLE++A QI  A GP G N +YLF+L  ++ ++  E  D+++  L   V++ 
Sbjct:   115 NPDYLGPAPLEDIAEQIFNAAGPSGRNTEYLFELANSIRNLVPEEADEHLFALEKLVKER 174

Query:   182 L 182
             L
Sbjct:   175 L 175

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

MGI|MGI:1915294 Chac2 "ChaC, cation transport regulator 2" [Mus musculus (taxid:10090)]

 Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
 Identities = 72/181 (39%), Positives = 100/181 (55%)

Query:     4 WVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICW 63
             WVFGYGSL+W   F Y +K++G+I +Y R F     DHRG P  P R  TL +      W
Sbjct:     2 WVFGYGSLIWKVDFPYQDKLVGYITNYSRRFWQGSTDHRGVPGKPGRVVTLVEDPGGSVW 61

Query:    64 GVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVS 123
             GVAY +  G E+E     YL+ RE      T V FY +   ++P    V+++  T D   
Sbjct:    62 GVAYKLPVGKEEE--VKTYLDFREKGGYRTTTVIFYPKDSTTKPF--SVLLYIGTCD--- 114

Query:   124 NKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAMFDIGHED--DYIIELANEVRKE 181
             N  YLGPAPLE++A QI  A GP G N +YLF+L  ++  +  ED  +++  L   V++ 
Sbjct:   115 NPNYLGPAPLEDIAEQIFNAAGPSGRNTEYLFELADSVRKLVPEDADEHLFSLEKLVKER 174

Query:   182 L 182
             L
Sbjct:   175 L 175

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

MGI|MGI:1916315 Chac1 "ChaC, cation transport regulator 1" [Mus musculus (taxid:10090)]

 Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
 Identities = 73/180 (40%), Positives = 100/180 (55%)

Query:     4 WVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICW 63
             W+FGYGSLVW P F Y +  +GF++ Y R F      HRG+ + P R  TL + +E   W
Sbjct:    35 WIFGYGSLVWKPDFAYSDSRVGFVRGYSRRFWQGDTFHRGSDKMPGRVVTLLEDREGCTW 94

Query:    64 GVAYCVRGGPEKERLAMEYLERRECE---YDSKTLVDFYREGEPSQPALTGVIVFTSTPD 120
             GVAY VRG  E+   A++YL  RE     YD+K  V FY +  P QP LT  + + +TP 
Sbjct:    95 GVAYQVRG--EQVNEALKYLNVREAVLGGYDTKE-VTFYPQDTPDQP-LTA-LAYVATPQ 149

Query:   121 KVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAMFDIGHE--DDYIIELANEV 178
                N  YLGPAP E +A QI    G  G+N +YL +L   M   G +  D+++  + + V
Sbjct:   150 ---NPGYLGPAPEEVIATQILACRGFSGHNLEYLLRLADFMQLCGPQAQDEHLEAIVDAV 206

GO:0005112 "Notch binding" evidence=IDA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005802 "trans-Golgi network" evidence=IDA

GO:0005829 "cytosol" evidence=ISO

GO:0006915 "apoptotic process" evidence=IEA

GO:0006986 "response to unfolded protein" evidence=IEA

GO:0007219 "Notch signaling pathway" evidence=IEA

GO:0007399 "nervous system development" evidence=IEA

GO:0010955 "negative regulation of protein processing" evidence=ISO

GO:0022008 "neurogenesis" evidence=IMP

GO:0045746 "negative regulation of Notch signaling pathway" evidence=ISO

GO:0070059 "intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress" evidence=ISO

RGD|1307153 Chac1 "ChaC, cation transport regulator homolog 1 (E. coli)" [Rattus norvegicus (taxid:10116)]

 Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
 Identities = 73/180 (40%), Positives = 98/180 (54%)

Query:     4 WVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICW 63
             W+FGYGSLVW P F Y +  +GF++ Y R F      HRG+ + P R  TL +  E   W
Sbjct:    34 WIFGYGSLVWKPDFAYSDSRVGFVRGYSRRFWQGDTFHRGSDKMPGRVVTLLEDHEGCTW 93

Query:    64 GVAYCVRGGPEKERLAMEYLERRECE---YDSKTLVDFYREGEPSQPALTGVIVFTSTPD 120
             GVAY VRG    E  A++YL  RE     YD+K  V FY +  P QP LT  + + +TP 
Sbjct:    94 GVAYQVRGEQVSE--ALKYLNVREAVLGGYDTKE-VTFYPQDTPDQP-LTA-LAYVATPQ 148

Query:   121 KVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAMFDIGHE--DDYIIELANEV 178
                N  YLGPAP E +A QI    G  G+N +YL +L   M   G +  D+++  + + V
Sbjct:   149 ---NPGYLGPAPEEVIATQILACRGFSGHNLEYLLRLADFMQLCGPQAQDEHLEAIVDAV 205

GO:0005112 "Notch binding" evidence=ISO;ISS

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005802 "trans-Golgi network" evidence=ISO;ISS

GO:0005829 "cytosol" evidence=IEA;ISO

GO:0006986 "response to unfolded protein" evidence=IEA

GO:0007219 "Notch signaling pathway" evidence=IEA

GO:0010955 "negative regulation of protein processing" evidence=ISO;ISS

GO:0022008 "neurogenesis" evidence=ISO;ISS

GO:0045746 "negative regulation of Notch signaling pathway" evidence=ISO;ISS

GO:0070059 "intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress" evidence=IEA;ISO

UNIPROTKB|Q9BUX1 CHAC1 "Cation transport regulator-like protein 1" [Homo sapiens (taxid:9606)]

 Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
 Identities = 70/180 (38%), Positives = 97/180 (53%)

Query:     4 WVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICW 63
             W+FGYGSLVW P F Y +  +GF++ Y R F      HRG+ + P R  TL +  E   W
Sbjct:    76 WIFGYGSLVWRPDFAYSDSRVGFVRGYSRRFWQGDTFHRGSDKMPGRVVTLLEDHEGCTW 135

Query:    64 GVAYCVRGGPEKERLAMEYLERRECE---YDSKTLVDFYREGEPSQPALTGVIVFTSTPD 120
             GVAY V+G  E+   A++YL  RE     YD+K  V FY +  P QP     + + +TP 
Sbjct:   136 GVAYQVQG--EQVSKALKYLNVREAVLGGYDTKE-VTFYPQDAPDQPLKA--LAYVATPQ 190

Query:   121 KVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAMFDIGHE--DDYIIELANEV 178
                N  YLGPAP E +A QI    G  G+N +YL +L   M   G +  D+++  + + V
Sbjct:   191 ---NPGYLGPAPEEAIATQILACRGFSGHNLEYLLRLADFMQLCGPQAQDEHLAAIVDAV 247

GO:0006986 "response to unfolded protein" evidence=IEA

GO:0007219 "Notch signaling pathway" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005802 "trans-Golgi network" evidence=ISS

GO:0010955 "negative regulation of protein processing" evidence=IMP

GO:0045746 "negative regulation of Notch signaling pathway" evidence=IMP

GO:0022008 "neurogenesis" evidence=ISS

GO:0005112 "Notch binding" evidence=ISS

GO:0070059 "intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress" evidence=IMP

GO:0005829 "cytosol" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|A6H738 CHAC1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
 Identities = 70/180 (38%), Positives = 96/180 (53%)

Query:     4 WVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICW 63
             W+FGYGSLVW P F Y +  +GF++ Y R F      HRG+ + P R  TL +  E   W
Sbjct:    31 WIFGYGSLVWRPDFAYSDSRVGFVRGYSRRFWQGDTFHRGSDKMPGRVVTLLEDHEGCTW 90

Query:    64 GVAYCVRGGPEKERLAMEYLERRECE---YDSKTLVDFYREGEPSQPALTGVIVFTSTPD 120
             GVAY V+G    E  A++YL  RE     YD+K  V FY +  P QP     + + +TP 
Sbjct:    91 GVAYQVQGEQVSE--ALKYLNVREAVLGGYDTKE-VTFYPQDTPDQPLKA--LAYVATPQ 145

Query:   121 KVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAMFDIGHE--DDYIIELANEV 178
                N  YLGPAP E +A QI    G  G+N +YL +L   M   G +  D+++  + + V
Sbjct:   146 ---NPGYLGPAPEEAIATQILACRGFSGHNLEYLLRLADFMQLCGPQAQDEHLAAIVDAV 202

GO:0070059 "intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress" evidence=IEA

GO:0045746 "negative regulation of Notch signaling pathway" evidence=IEA

GO:0022008 "neurogenesis" evidence=IEA

GO:0010955 "negative regulation of protein processing" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005802 "trans-Golgi network" evidence=IEA

GO:0005112 "Notch binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00032368001 SubName- Full=Chromosome chr4 scaffold_6, whole genome shotgun sequence; (222 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	225
pfam04752	178	pfam04752, ChaC, ChaC-like protein	8e-84
COG3703	190	COG3703, ChaC, Uncharacterized protein involved in	5e-39
cd06661	99	cd06661, GGCT_like, GGCT-like domains, also called	9e-07

>gnl|CDD|218243 pfam04752, ChaC, ChaC-like protein

 Score =  246 bits (630), Expect = 8e-84
 Identities = 92/183 (50%), Positives = 111/183 (60%), Gaps = 9/183 (4%)

Query: 3   FWVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETIC 62
            WVFGYGSL+W PGFEYDE   GFIK Y R F     DHRGTP+ P R  TLE+ +E  C
Sbjct: 1   LWVFGYGSLIWKPGFEYDESRRGFIKGYHRRFCQGSTDHRGTPEQPGRVLTLEEGEEGRC 60

Query: 63  WGVAYCVRGGPEKERLAMEYLERREC-EYDSKTLVDFY-REGEPSQPALTGVIVFTSTPD 120
           WGVAY V G   +E   +EYL+ RE         V FY R    ++P +   +V+ +TP 
Sbjct: 61  WGVAYRVPGEEAEE--VLEYLDVREKVNGYETESVPFYPRLDVGTEPVVLRALVYVATPK 118

Query: 121 KVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAMFDIG--HEDDYIIELANEV 178
              N  YLGPAPLEE+A QIATAVGP G N +YLF L K +  +G    DD++ EL   V
Sbjct: 119 ---NPQYLGPAPLEEIAAQIATAVGPSGPNAEYLFNLAKHLRALGPEIRDDHLEELEELV 175

Query: 179 RKE 181
           RKE
Sbjct: 176 RKE 178

The ChaC protein is thought to be associated with the putative ChaA Ca2+/H+ cation transport protein in Escherichia coli. Its function is not known. This family also includes homologues regions from several other bacterial and eukaryotic proteins. Length = 178

>gnl|CDD|226226 COG3703, ChaC, Uncharacterized protein involved in cation transport [Inorganic ion transport and metabolism]

 Score =  132 bits (335), Expect = 5e-39
 Identities = 61/183 (33%), Positives = 82/183 (44%), Gaps = 8/183 (4%)

Query: 3   FWVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETIC 62
            WVFGYGSL+WNPGFE+ E     +  Y R F L   DHRGT + P     L++     C
Sbjct: 12  LWVFGYGSLMWNPGFEFTEVRRATLHGYHRSFCLRSTDHRGTAEQPGLVLGLDRGGS--C 69

Query: 63  WGVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKV 122
            GVAY +     +E   +EYL  RE  Y +   V  +   E         +VF       
Sbjct: 70  EGVAYRIPEAHAEE--VLEYLREREMNY-TLVYVPRWLPVELEGGRRVNALVFVGDRK-- 124

Query: 123 SNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAMFDIGHEDDYIIELANEVRKEL 182
            +  Y G    E++A  IA AVG  G N +YLF   + +  +G  D  + +L   V   L
Sbjct: 125 -HPQYAGDLDAEQIAAIIAAAVGLSGPNAEYLFNTLQHLRKLGIRDHNLEDLLELVAALL 183

Query: 183 GTA 185
              
Sbjct: 184 AEQ 186

Length = 190

>gnl|CDD|119400 cd06661, GGCT_like, GGCT-like domains, also called AIG2-like family

 Score = 45.4 bits (108), Expect = 9e-07
 Identities = 19/111 (17%), Positives = 30/111 (27%), Gaps = 20/111 (18%)

Query: 5   VFGYGSLVWNPGFE-----YDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQE 59
           +F YG+L+                   +K YR VF              +    L     
Sbjct: 1   LFVYGTLMDGEVLHARLGRALFLGPATLKGYRLVFG-----------GGSGYPGLVPGPG 49

Query: 60  TICWGVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALT 110
              WG  Y V     ++   ++  E     Y  +  V+   E      A  
Sbjct: 50  ARVWGELYEV---DPEDLARLDAFEGVPGGYR-REEVEVELEDGEGVEAWV 96

Gamma-glutamyl cyclotransferase (GGCT) catalyzes the formation of pyroglutamic acid (5-oxoproline) from dipeptides containing gamma-glutamyl, and is a dimeric protein. In Homo sapiens, the protein is encoded by the gene C7orf24, and the enzyme participates in the gamma-glutamyl cycle. Hereditary defects in the gamma-glutamyl cycle have been described for some of the genes involved, but not for C7orf24. The synthesis and metabolism of glutathione (L-gamma-glutamyl-L-cysteinylglycine) ties the gamma-glutamyl cycle to numerous cellular processes; glutathione acts as a ubiquitous reducing agent in reductive mechanisms involved in protein and DNA synthesis, transport processes, enzyme activity, and metabolism. AIG2 (avrRpt2-induced gene) is an Arabidopsis protein that exhibits RPS2- and avrRpt2-dependent induction early after infection with Pseudomonas syringae pv maculicola strain ES4326 carrying avrRpt2. avrRpt2 is an avirulence gene that can convert virulent strains of P. syringae to avirulence on Arabidopsis thaliana, soybean, and bean. The family also includes bacterial tellurite-resistance proteins (trgB); tellurium (Te) compounds are used in industrial processes and had been used as antimicrobial agents in the past. Some members have been described proteins involved in cation transport (chaC). Length = 99

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	225
PF04752	178	ChaC: ChaC-like protein; InterPro: IPR006840 The C	100.0
KOG3182	212	consensus Predicted cation transporter [Inorganic	100.0
COG3703	190	ChaC Uncharacterized protein involved in cation tr	100.0
PHA03014	163	hypothetical protein; Provisional	99.68
cd06661	99	GGCT_like GGCT-like domains, also called AIG2-like	99.67
PF13772	83	AIG2_2: AIG2-like family; PDB: 2QIK_A 2RBH_B 2I5T_	98.92
PF06094	102	AIG2: AIG2-like family; InterPro: IPR009288 AIG2 i	98.87
KOG4059	193	consensus Uncharacterized conserved protein [Funct	98.84
COG2105	120	Uncharacterized conserved protein [Function unknow	97.41
PF06570	206	DUF1129: Protein of unknown function (DUF1129); In	90.51
PRK07668	254	hypothetical protein; Validated	85.28
KOG4450	168	consensus Uncharacterized conserved protein [Funct	83.64
COG4858	226	Uncharacterized membrane-bound protein conserved i	80.08

>PF04752 ChaC: ChaC-like protein; InterPro: IPR006840 The ChaC protein is thought to be associated with the putative ChaA Ca2+/H+ cation transport protein in Escherichia coli

Probab=100.00  E-value=3.8e-67  Score=443.50  Aligned_cols=173  Identities=47%  Similarity=0.893  Sum_probs=162.8

Q ss_pred             cEEEEccccccCCCCCCCceeeeEEeceEEEEEeecccCCCCCCCCceeeeeeeCCCCeEEEEEEEeeCCCccHHHHHHH
Q 027276            3 FWVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERLAMEY   82 (225)
Q Consensus         3 ~WVFgYGSLiW~p~f~~~e~~~a~l~Gy~R~F~~~S~~hRGTpe~PGrVltL~~~~gg~c~GvaYri~~~~~~~~e~l~~   82 (225)
                      +||||||||||||+|+|.++++|+|+||||+|||+|++||||||+||||+||++.++++||||||+|++  ++++++|++
T Consensus         1 ~WVFGYGSLiW~p~f~~~e~~~a~i~Gy~R~F~~~s~~hRGTpe~PGrvltL~~~~~~~c~Gvayrv~~--~~~~~~l~~   78 (178)
T PF04752_consen    1 LWVFGYGSLIWNPGFPYAERRPAYIKGYHRRFCQGSTDHRGTPEQPGRVLTLDPGEEGSCWGVAYRVPE--EDAEEVLEY   78 (178)
T ss_pred             CEEEEeccceeCCCCCccceEEEEecCcccceEeeccccCCCcCCCcceeeeeeCCCCEEEEEEEEecC--cCHHHHHHH
Confidence            799999999999999999999999999999999999999999999999999999778999999999995  677899999


Q ss_pred             HHHHhh-cCCCcceEEEEec-CCCCCCceeEEEEEEEecCCCCCCCCCCCCCHHHHHHHHHhccCCCCCcHHHHHHHHHH
Q 027276           83 LERREC-EYDSKTLVDFYRE-GEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKA  160 (225)
Q Consensus        83 Ld~RE~-~~y~~~~v~v~~~-~~~~~~~~~~alvYva~~~~~~n~~y~g~~~~e~~A~~I~~a~G~sG~N~eYL~~l~~~  160 (225)
                      ||.||| ++|.+.+++++.. +....+.+++|++||+++   +||+|+|+++++++|++|++|+|+||+|.|||++|+++
T Consensus        79 L~~RE~~~Gy~~~~v~~~~~~~~~~~~~~~~al~yv~~~---~n~~y~g~~~~~~~A~~Ia~a~G~~G~N~eYL~~l~~~  155 (178)
T PF04752_consen   79 LDEREMIGGYTRHWVPFYPEVDTDSGPVIVEALVYVADP---DNPQYLGPLPLEEIARIIATASGPSGSNREYLFNLAEA  155 (178)
T ss_pred             HhhcccccccceEEEEEEEeccCCCCceEEEEEEEEecC---CCccccCCCCHHHHHHHHhheECcCcCCHHHHHHHHHH
Confidence            999999 7899999999873 333444456899999999   99999999999999999999999999999999999999


Q ss_pred             HHhCC--CCChhHHHHHHHHHh
Q 027276          161 MFDIG--HEDDYIIELANEVRK  180 (225)
Q Consensus       161 Lr~lg--i~D~~L~~L~~~v~~  180 (225)
                      |+++|  |.|+||++|+++|++
T Consensus       156 L~~~gp~i~D~~l~~L~~~V~~  177 (178)
T PF04752_consen  156 LRELGPGIRDPHLFALERRVRE  177 (178)
T ss_pred             HHHhCCCCCChHHHHHHHHHhh
Confidence            99999  999999999999986

Its function is not known. This family also includes homologues regions from several other bacterial and eukaryotic proteins.

>KOG3182 consensus Predicted cation transporter [Inorganic ion transport and metabolism]

Probab=100.00  E-value=1.8e-66  Score=440.19  Aligned_cols=198  Identities=51%  Similarity=0.874  Sum_probs=181.2

Q ss_pred             CccEEEEccccccCCCCCCCceeeeEEeceEEEEEeecccCCCCCCCCceeeeeeeCCCCeEEEEEEEeeCCCccHHHHH
Q 027276            1 MVFWVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERLAM   80 (225)
Q Consensus         1 m~~WVFgYGSLiW~p~f~~~e~~~a~l~Gy~R~F~~~S~~hRGTpe~PGrVltL~~~~gg~c~GvaYri~~~~~~~~e~l   80 (225)
                      |++||||||||||||+|+|+++.+|+|+||+|||||+|+||||||+.||||+||+++.++.||||||+|++  +.+.+++
T Consensus         8 ~~lWVFGYGSLiW~Pgf~y~~~~~gfI~Gy~RrF~q~s~dHRGtp~~PGRv~TLi~~~e~~~wGvay~V~g--~~~~~~l   85 (212)
T KOG3182|consen    8 MALWVFGYGSLIWKPGFHYDESIPGFIKGYKRRFWQGSTDHRGTPEHPGRVATLIPYEEAITWGVAYRVRG--KQASEVL   85 (212)
T ss_pred             ceEEEEeecceeecCCCCccccchhhheehhhheeccccccCCCCCCCceeEEeecCCcceEeeEEEEecc--hhHHHHH
Confidence            78999999999999999999999999999999999999999999999999999999999999999999996  6888999


Q ss_pred             HHHHHHhhcCCCcceEEEEecCCCCCCceeEEEEEEEecCCCCCCCCCCCCCHHHHHHHHHhccCCCCCcHHHHHHHHHH
Q 027276           81 EYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKA  160 (225)
Q Consensus        81 ~~Ld~RE~~~y~~~~v~v~~~~~~~~~~~~~alvYva~~~~~~n~~y~g~~~~e~~A~~I~~a~G~sG~N~eYL~~l~~~  160 (225)
                      ++|+.||.+||..+.|+|++.+..+.+.+..+||||+|+   +|+.|+|+.|+++||++|++|.||||+|.||||||+++
T Consensus        86 ~yl~~RE~nGY~~~~v~f~~e~~~~~p~v~~vlvyvaTp---~N~~ylGp~ple~iArqI~t~~GpsG~N~eYLf~La~a  162 (212)
T KOG3182|consen   86 EYLNVRELNGYTTHEVEFYPEDAAELPEVLGVLVYVATP---DNEYYLGPAPLEEIARQIVTARGPSGPNREYLFNLAKA  162 (212)
T ss_pred             HHHHHHhhcCcceeeeeeeccCCCCCCceEEEEEEEecC---CCccccCCccHHHHHHHHHhccCCCCCcHHHHHHHHHH
Confidence            999999999999999999998877778888999999999   89999999999999999999999999999999999999


Q ss_pred             HHhC--CCCChhHHHHHHHHHhHhccccccccccccccCCCCCCCCCCCC
Q 027276          161 MFDI--GHEDDYIIELANEVRKELGTAEKGILKERKLVGSSSRMPLTKSH  208 (225)
Q Consensus       161 Lr~l--gi~D~~L~~L~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (225)
                      |+++  |..|+||++|++.|++.+....   ..+..|  -.|+.|+..+|
T Consensus       163 m~~l~p~~~D~hl~eL~~~Vrk~l~~~~---~~~~al--~~~~~i~~~~~  207 (212)
T KOG3182|consen  163 MRQLFPGAEDEHLFELENEVRKYLVESR---PLVHAL--LEPSGIRVEEK  207 (212)
T ss_pred             HHHcCCCchhHHHHHHHHHHHHHHhccc---hhhhhh--cccchhhhhhh
Confidence            9999  7899999999999999776432   112333  45566666554

>COG3703 ChaC Uncharacterized protein involved in cation transport [Inorganic ion transport and metabolism]

Probab=100.00  E-value=2.7e-59  Score=395.15  Aligned_cols=175  Identities=34%  Similarity=0.554  Sum_probs=160.4

Q ss_pred             ccEEEEccccccCCCCCCCceeeeEEeceEEEEEeecccCCCCCCCCceeeeeeeCCCCeEEEEEEEeeCCCccHHHHHH
Q 027276            2 VFWVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERLAME   81 (225)
Q Consensus         2 ~~WVFgYGSLiW~p~f~~~e~~~a~l~Gy~R~F~~~S~~hRGTpe~PGrVltL~~~~gg~c~GvaYri~~~~~~~~e~l~   81 (225)
                      .+||||||||||||+|+|.++.+|+++||||+||+.|++||||+++||+|++|+  +||+|+|||||||+  +..+++++
T Consensus        11 ~~WVFgYGSLmW~P~f~~~e~~~a~~~G~~Rsfc~~s~~~RGT~~~PGlvl~L~--~GGsc~GvafRip~--~~~~~v~~   86 (190)
T COG3703          11 ELWVFGYGSLMWNPGFEFTEVRRATLHGYHRSFCLRSTDHRGTAEQPGLVLGLD--RGGSCEGVAYRIPE--AHAEEVLE   86 (190)
T ss_pred             CeEEEEecceeecCCccccceeEEEEecceeEEEEEEeeecCCcCCCceEEEee--CCCcEEEEEEEcCc--hhhHHHHH
Confidence            389999999999999999999999999999999999999999999999999997  49999999999995  78889999


Q ss_pred             HHHHHhhcCCCcceEEEEecCCCCCCceeEEEEEEEecCCCCCCCCCCCCCHHHHHHHHHhccCCCCCcHHHHHHHHHHH
Q 027276           82 YLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAM  161 (225)
Q Consensus        82 ~Ld~RE~~~y~~~~v~v~~~~~~~~~~~~~alvYva~~~~~~n~~y~g~~~~e~~A~~I~~a~G~sG~N~eYL~~l~~~L  161 (225)
                      ||++||++ ++..+++.+.+-....+...+|++||+++   +|++|+|+++.+++|.+|+.|+|+||+|.|||++|.++|
T Consensus        87 yL~~RE~~-~t~~y~p~~l~v~~~~g~~~~al~~v~~~---~h~qyag~l~~~~~A~~ia~a~G~sG~n~eYL~~t~~hL  162 (190)
T COG3703          87 YLREREMN-YTLVYVPRWLPVELEGGRRVNALVFVGDR---KHPQYAGDLDAEQIAAIIAAAVGLSGPNAEYLFNTLQHL  162 (190)
T ss_pred             HHHHhhcc-ccceeeeEEEEEecCCCcEEEEEEEEecC---CccccCCCCcHHHHHHHHHHHhCCCCCcHHHHHHHHHHH
Confidence            99999997 66666655554444444567899999999   999999999999999999999999999999999999999


Q ss_pred             HhCCCCChhHHHHHHHHHhHhcc
Q 027276          162 FDIGHEDDYIIELANEVRKELGT  184 (225)
Q Consensus       162 r~lgi~D~~L~~L~~~v~~~~~~  184 (225)
                      +++||+|+.|+.|...|.+...+
T Consensus       163 ~~~gi~d~~l~~l~~~v~~~~~~  185 (190)
T COG3703         163 RKLGIRDHNLEDLLELVAALLAE  185 (190)
T ss_pred             HhcCCcchhHHHHHHHHHHHHHH
Confidence            99999999999999999987664

>PHA03014 hypothetical protein; Provisional

Probab=99.68  E-value=1.3e-15  Score=127.65  Aligned_cols=144  Identities=14%  Similarity=0.163  Sum_probs=110.9

Q ss_pred             CccEEEEccccccCCCC--------CCCceeeeEEeceEEEEEeecccCCCCCCCCceeeeeeeCCCCeEEEEEEEeeCC
Q 027276            1 MVFWVFGYGSLVWNPGF--------EYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGG   72 (225)
Q Consensus         1 m~~WVFgYGSLiW~p~f--------~~~e~~~a~l~Gy~R~F~~~S~~hRGTpe~PGrVltL~~~~gg~c~GvaYri~~~   72 (225)
                      |-.|+|||||.|+...+        .......|.|.||.=+|..+ -      ...|-++|+++++|+.|||++|+|+. 
T Consensus         1 ~~~~YfAYGSNl~~~qm~~Rcp~~~~a~~vg~a~L~~~~~~L~f~-~------~~~Ga~ATIvp~~g~~V~Gvlw~i~~-   72 (163)
T PHA03014          1 MYKYYFGYGANQNINYLIHMHKLKIDFLNIKIGIILGHSFKLCYS-K------EIDSVIASIKKDDNGIVFGILYEFNE-   72 (163)
T ss_pred             CceEEEEEccCcCHHHHHHhCCCCCCCceEEEEEeeccceEEecc-C------CcCCceEEEEECCCCEEEEEEEEeCH-
Confidence            67899999999976544        23345679999776666632 1      23577999999999999999999995 


Q ss_pred             CccHHHHHHHHHHHhhc---CCCcceEEEEecCCCCCCceeEEEEE--EEecCCCCCCCCCCCCCHHHHHHHHHhccCCC
Q 027276           73 PEKERLAMEYLERRECE---YDSKTLVDFYREGEPSQPALTGVIVF--TSTPDKVSNKYYLGPAPLEEMARQIATAVGPC  147 (225)
Q Consensus        73 ~~~~~e~l~~Ld~RE~~---~y~~~~v~v~~~~~~~~~~~~~alvY--va~~~~~~n~~y~g~~~~e~~A~~I~~a~G~s  147 (225)
                           ..++.||+.|+.   -|.+..++|.+.++..   ...|++|  +.++   .++.+                 -+.
T Consensus        73 -----~dl~~LD~~EGvp~~~Y~~~~v~V~~~~~~~---~~~a~~Y~~~~~~---~~~~~-----------------~~~  124 (163)
T PHA03014         73 -----SIMKKFDKQEFIDKNIYKLAKMNVLDLEDEK---IIEAQAYKAILDD---DNNMF-----------------YDA  124 (163)
T ss_pred             -----HHHHHHhhhcCCCcCceEEEEEEEEeCCCCc---EEEEEEEehhcCC---Ccccc-----------------cCC
Confidence                 788999999983   5999999998765322   3579999  5554   33321                 112


Q ss_pred             CCcHHHHHHHHHHHHhCCC---CChhHHHHHHHHHh
Q 027276          148 GNNRDYLFKLEKAMFDIGH---EDDYIIELANEVRK  180 (225)
Q Consensus       148 G~N~eYL~~l~~~Lr~lgi---~D~~L~~L~~~v~~  180 (225)
                      -|+..||.-+.++.++.|+   +.+|+..|.+..++
T Consensus       125 ~Ps~~Yl~~I~~Ga~e~Gl~~~P~~Y~~~l~~~~~~  160 (163)
T PHA03014        125 PNFNIYKDIIIDALIENNILDYPLWYIKHINNIFKE  160 (163)
T ss_pred             CChHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHH
Confidence            3677999999999999999   99999999887654

>cd06661 GGCT_like GGCT-like domains, also called AIG2-like family

Probab=99.67  E-value=2.1e-16  Score=118.30  Aligned_cols=92  Identities=21%  Similarity=0.143  Sum_probs=77.0

Q ss_pred             EEEccccccCCCC-----CCCceeeeEEeceEEEEEeecccCCCCCCCCceeeeeeeCCCCeEEEEEEEeeCCCccHHHH
Q 027276            5 VFGYGSLVWNPGF-----EYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERLA   79 (225)
Q Consensus         5 VFgYGSLiW~p~f-----~~~e~~~a~l~Gy~R~F~~~S~~hRGTpe~PGrVltL~~~~gg~c~GvaYri~~~~~~~~e~   79 (225)
                      ||+||||||.+.+     ......+|+|+||++.|+..+           ...+|++++++.|+|++|+++.      +.
T Consensus         1 ~F~YGsl~~~~~~~~~~~~~~~~~~a~l~g~~l~~~~~~-----------~~p~~~~~~~~~v~G~v~~i~~------~~   63 (99)
T cd06661           1 LFVYGTLMDGEVLHARLGRALFLGPATLKGYRLVFGGGS-----------GYPGLVPGPGARVWGELYEVDP------ED   63 (99)
T ss_pred             CEEeccCCChhHhHhhCCCCceEEEEEecCcEEEecCCC-----------ccCEEEeCCCCEEEEEEEEECH------HH
Confidence            6999999999988     456778999999999999876           2446666788899999999983      79


Q ss_pred             HHHHHHHhhc--CCCcceEEEEecCCCCCCceeEEEEEEE
Q 027276           80 MEYLERRECE--YDSKTLVDFYREGEPSQPALTGVIVFTS  117 (225)
Q Consensus        80 l~~Ld~RE~~--~y~~~~v~v~~~~~~~~~~~~~alvYva  117 (225)
                      ++.||.+|+.  .|.+..+++...++.    ...|++|+.
T Consensus        64 l~~LD~~E~~~~~Y~r~~v~v~~~~~~----~~~a~~Y~~   99 (99)
T cd06661          64 LARLDAFEGVPGGYRREEVEVELEDGE----GVEAWVYVA   99 (99)
T ss_pred             HHhhhhhcCCCCCeEEEEEEEEeCCCC----EEEEEEEeC
Confidence            9999999996  899999999876532    257899973

Gamma-glutamyl cyclotransferase (GGCT) catalyzes the formation of pyroglutamic acid (5-oxoproline) from dipeptides containing gamma-glutamyl, and is a dimeric protein. In Homo sapiens, the protein is encoded by the gene C7orf24, and the enzyme participates in the gamma-glutamyl cycle. Hereditary defects in the gamma-glutamyl cycle have been described for some of the genes involved, but not for C7orf24. The synthesis and metabolism of glutathione (L-gamma-glutamyl-L-cysteinylglycine) ties the gamma-glutamyl cycle to numerous cellular processes; glutathione acts as a ubiquitous reducing agent in reductive mechanisms involved in protein and DNA synthesis, transport processes, enzyme activity, and metabolism. AIG2 (avrRpt2-induced gene) is an Arabidopsis protein that exhibits RPS2- and avrRpt2-dependent induction early after infection with Pseudomonas syringae pv maculicola strain ES4326 carrying avrRpt2. avrRpt2 is an avir

>PF13772 AIG2_2: AIG2-like family; PDB: 2QIK_A 2RBH_B 2I5T_B 2Q53_A 2PN7_B 3CRY_A

Probab=98.92  E-value=3.7e-09  Score=78.74  Aligned_cols=80  Identities=20%  Similarity=0.292  Sum_probs=62.1

Q ss_pred             eEEEEEEEeeCCCccHHHHHHHHHHHhhc---CCCcceEEEEecCCCCCCceeEEEEEEEecCCCCCCCCCCCCCHHHHH
Q 027276           61 ICWGVAYCVRGGPEKERLAMEYLERRECE---YDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMA  137 (225)
Q Consensus        61 ~c~GvaYri~~~~~~~~e~l~~Ld~RE~~---~y~~~~v~v~~~~~~~~~~~~~alvYva~~~~~~n~~y~g~~~~e~~A  137 (225)
                      .|||++|+|+.      +.++.||.+|+.   .|++..++|...++.    ...|++|++++   . +.  +        
T Consensus         1 ~V~Gvly~l~~------~d~~~LD~~Eg~~~g~Y~~~~v~V~~~~g~----~~~a~tY~~~~---~-~~--~--------   56 (83)
T PF13772_consen    1 RVWGVLYELSE------EDLESLDRYEGVPIGAYRRIEVTVSTADGK----PVEAFTYVANP---K-PE--G--------   56 (83)
T ss_dssp             EEEEEEEEEEG------GGHHHHHHHTTTTTTSEEEEEEEEEETTCE----EEEEEEEEESS---E-EE-----------
T ss_pred             CEEEEEEEECH------HHHHHHHHhcCCCCCCEEEEEEEEEcCCCC----EEEEEEEEcCC---C-CC--C--------
Confidence            48999999996      688999999983   599999999874432    25799999987   3 21  1        


Q ss_pred             HHHHhccCCCCCcHHHHHHHHHHHHhCCCCChhHHHH
Q 027276          138 RQIATAVGPCGNNRDYLFKLEKAMFDIGHEDDYIIEL  174 (225)
Q Consensus       138 ~~I~~a~G~sG~N~eYL~~l~~~Lr~lgi~D~~L~~L  174 (225)
                                -|+.+||..+.+..++.|++..|+..|
T Consensus        57 ----------~Ps~~Yl~~i~~GA~e~gLp~~Yv~~L   83 (83)
T PF13772_consen   57 ----------PPSDRYLDLILRGAREHGLPAEYVEKL   83 (83)
T ss_dssp             -------------HHHHHHHHHHHHHCT--HHHHHHH
T ss_pred             ----------CCCHHHHHHHHHHHHHcCCCHHHHhhC
Confidence                      188999999999999999999999876

>PF06094 AIG2: AIG2-like family; InterPro: IPR009288 AIG2 is an Arabidopsis protein that exhibit RPS2- and avrRpt2-dependent induction early after infection with Pseudomonas syringae pv maculicola strain ES4326 carrying avrRpt2 []

Probab=98.87  E-value=1.9e-08  Score=76.09  Aligned_cols=98  Identities=13%  Similarity=-0.018  Sum_probs=64.4

Q ss_pred             EEEccccccCCCCCCCce-eeeEEeceEEEEEeecccCCCCCCCCceeeeeeeCCCC-eEEEEEEEeeCCCccHHHHHHH
Q 027276            5 VFGYGSLVWNPGFEYDEK-ILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQET-ICWGVAYCVRGGPEKERLAMEY   82 (225)
Q Consensus         5 VFgYGSLiW~p~f~~~e~-~~a~l~Gy~R~F~~~S~~hRGTpe~PGrVltL~~~~gg-~c~GvaYri~~~~~~~~e~l~~   82 (225)
                      ||.|||||.....+..-. ..+.+.+........  .+.+    .|...+|++++++ .|+|.+|.|..      +.++.
T Consensus         1 lFvYGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~----~~~yP~l~~~~~~~~V~G~l~~v~~------~~l~~   68 (102)
T PF06094_consen    1 LFVYGTLMDGEVNHSVLGRPGAKFIGEPATLGGR--YLYG----GGGYPALVPGEGSGRVEGELYEVDD------EELAR   68 (102)
T ss_dssp             EEESSTTSTTSTTGHHGTSGSSEEEEEEEEEEEE--EEET----TSSCEEEESCTTSSEEEEEEEEE-H------HHHHH
T ss_pred             CEEECCCCCCCcChhhhhccceEEEEeeEEEEeE--EEeC----CCCCCEEEEcCCCCEEEEEEEEECH------HHHHh
Confidence            799999999877653211 134455554444411  1111    2334555556666 99999999984      56999


Q ss_pred             HHHHh--hcCCCcceEEEEecCCCCCCceeEEEEEEEe
Q 027276           83 LERRE--CEYDSKTLVDFYREGEPSQPALTGVIVFTST  118 (225)
Q Consensus        83 Ld~RE--~~~y~~~~v~v~~~~~~~~~~~~~alvYva~  118 (225)
                      ||..|  ...|.+..++|...++..    ..|.+|+.+
T Consensus        69 LD~~E~~~~~Y~R~~v~v~~~~g~~----~~a~vYv~~  102 (102)
T PF06094_consen   69 LDEYEGEGSLYRRVRVPVELGDGEE----VEAWVYVWN  102 (102)
T ss_dssp             HHHHTTTTTSEEEEEEEEECCTSSE----EEEEEEEE-
T ss_pred             hHhhcCCCCceEEEEEEEEeCCCCE----eEEEEEEEC
Confidence            99996  468999999998766432    479999863

Its structure consists of a five-stranded beta-barrel surrounded by two alpha-helices and a small beta-sheet. A long flexible alpha-helix protrudes from the structure at the C-terminal end. Conserved residues in a hydrophilic cavity, which are able to bind small ligands, may act as an active site in AIG2-like proteins [].; PDB: 1XHS_A 2KL2_A 1VKB_A 3JUD_A 3JUB_A 3JUC_A 2JQV_A 2QIK_A 2G0Q_A 1V30_A.

>KOG4059 consensus Uncharacterized conserved protein [Function unknown]

Probab=98.84  E-value=3.6e-09  Score=88.33  Aligned_cols=151  Identities=19%  Similarity=0.226  Sum_probs=105.7

Q ss_pred             cEEEEccccccCCCCCCC-----ceeeeEEeceEEEEEeecccCCCCCCCCceeeeeeeCCCCeEEEEEEEeeCCCccHH
Q 027276            3 FWVFGYGSLVWNPGFEYD-----EKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKER   77 (225)
Q Consensus         3 ~WVFgYGSLiW~p~f~~~-----e~~~a~l~Gy~R~F~~~S~~hRGTpe~PGrVltL~~~~gg~c~GvaYri~~~~~~~~   77 (225)
                      +.+|||||.|---..++.     --.+|.|..|+--|...|..+-|      -++||.+.+|..|||++.+++-      
T Consensus        24 FlYFafGSNlL~~RIh~rnpsA~~~c~a~L~dfrLdFan~S~~W~G------~vATI~~t~GdeVWG~vWKm~~------   91 (193)
T KOG4059|consen   24 FLYFAFGSNLLIKRIHIRNPSAVRICPALLPDFRLDFANESAGWSG------SVATIVPTQGDEVWGTVWKMDL------   91 (193)
T ss_pred             hhhhhcccchhhhheeecCCCceeeccccCcceeeecccccccccc------ceeEEecCCCCeEEEEEEEccc------
Confidence            578999999976666553     23789999999999998877655      5999999999999999999995      


Q ss_pred             HHHHHHHHHhh---cCCCcceEEEEecCCCCCCceeEEEEEEEecCCCCCCCCCCCCCHHHHHHHHHhccCCCCCcHHHH
Q 027276           78 LAMEYLERREC---EYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYL  154 (225)
Q Consensus        78 e~l~~Ld~RE~---~~y~~~~v~v~~~~~~~~~~~~~alvYva~~~~~~n~~y~g~~~~e~~A~~I~~a~G~sG~N~eYL  154 (225)
                      ..+.-||..|+   +.|.+..|.|.+..+.+    ..|-+|..+.     -.-+...|-...-..|....-.++--.||+
T Consensus        92 snl~slDeQEgv~~G~Y~~~~V~V~t~eg~~----itcR~Yl~sn-----l~~~P~~PSp~Yk~~i~~GAkEn~lP~dY~  162 (193)
T KOG4059|consen   92 SNLPSLDEQEGVSQGIYEPRTVYVKTHEGES----ITCRAYLLSN-----LYELPKQPSPTYKQCIVKGAKENSLPEDYV  162 (193)
T ss_pred             ccCccchhhhcccccceEEEEEEEecCCCce----eehhHhhhhh-----hhhccCCCCchHHhhhhhcccccCCcHHHH
Confidence            57788999996   35888888887765433    3456677653     111122344445566666666777777777


Q ss_pred             HHHHHHHHhC---CCCChhHHHHH
Q 027276          155 FKLEKAMFDI---GHEDDYIIELA  175 (225)
Q Consensus       155 ~~l~~~Lr~l---gi~D~~L~~L~  175 (225)
                      .+| ++++.-   |-.|.++..+.
T Consensus       163 qkL-~aIe~NgfaG~V~~~ie~~~  185 (193)
T KOG4059|consen  163 QKL-RAIEHNGFAGQVNSYIERKL  185 (193)
T ss_pred             HHH-hccccCCcccchhhHHHHHH
Confidence            654 233333   34555555544

>COG2105 Uncharacterized conserved protein [Function unknown]

Probab=97.41  E-value=0.0011  Score=53.40  Aligned_cols=91  Identities=21%  Similarity=0.172  Sum_probs=60.9

Q ss_pred             EEEccccccCCCCCC------CceeeeEEeceEEEEEeecccCCCCCCCCceeeeeeeCCCCeEEEEEEEeeCCCccHHH
Q 027276            5 VFGYGSLVWNPGFEY------DEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERL   78 (225)
Q Consensus         5 VFgYGSLiW~p~f~~------~e~~~a~l~Gy~R~F~~~S~~hRGTpe~PGrVltL~~~~gg~c~GvaYri~~~~~~~~e   78 (225)
                      ||-||||.=...=+.      ..-..+.++||+- |...       +..||.+-    + .+.|+|=+|+++.      +
T Consensus         4 vfVYGTLr~Ge~N~~~~~~~~~~~~~~~~~gy~l-y~lg-------~~YP~~~~----g-~~~V~Gevy~~d~------~   64 (120)
T COG2105           4 VFVYGTLRPGEGNHHRYLKGARFLGEASTKGYQL-YDLG-------PGYPGLVP----G-EGKVHGEVYRIDE------E   64 (120)
T ss_pred             EEEEeccCCCCcchHHHHhcCcccCcceeeeeee-eccC-------CCCcEEcC----C-CCEEEEEEEEECH------H
Confidence            999999973332221      1124466777432 2222       33665544    3 3599999999994      8


Q ss_pred             HHHHHHHHhhcC-CCcceEEEEecCCCCCCceeEEEEEEEec
Q 027276           79 AMEYLERRECEY-DSKTLVDFYREGEPSQPALTGVIVFTSTP  119 (225)
Q Consensus        79 ~l~~Ld~RE~~~-y~~~~v~v~~~~~~~~~~~~~alvYva~~  119 (225)
                      .++.||.-|..+ |.+.++.+.++.++.     .|++|+.+.
T Consensus        65 ~l~~LDelE~~~~y~r~~v~v~~~~G~~-----~aw~Y~y~~  101 (120)
T COG2105          65 TLEALDELEDYGGYYRREVEVTTPLGSK-----EAWLYVYAE  101 (120)
T ss_pred             HHhhhhhhhccCceEEEEEEEEcCCCCE-----EEEEEEEcC
Confidence            999999999863 677788776665532     589999987

>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues

Probab=90.51  E-value=0.23  Score=42.66  Aligned_cols=53  Identities=30%  Similarity=0.498  Sum_probs=41.3

Q ss_pred             CCCcHHHHHHHHHHHHhCCCCChhHHHHHHH-HHhHhccccccccccccccCCCCC
Q 027276          147 CGNNRDYLFKLEKAMFDIGHEDDYIIELANE-VRKELGTAEKGILKERKLVGSSSR  201 (225)
Q Consensus       147 sG~N~eYL~~l~~~Lr~lgi~D~~L~~L~~~-v~~~~~~~~~~~~~~~~~~~~~~~  201 (225)
                      +-.|.||++++-..|++-+++|...+++... +.+++..|.+|.. ++.+|| +|-
T Consensus         3 TkkN~~y~~~l~~~L~~~~~~e~~~e~~L~eil~~LleaQk~G~t-A~~lfG-~P~   56 (206)
T PF06570_consen    3 TKKNQEYIFDLRKYLRSSGVSEEEIEELLEEILPHLLEAQKKGKT-ARQLFG-DPK   56 (206)
T ss_pred             chHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCc-HHHHcC-CHH
Confidence            4579999999999999999999999988554 4555555554544 789999 763

However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).

>PRK07668 hypothetical protein; Validated

Probab=85.28  E-value=0.87  Score=41.05  Aligned_cols=56  Identities=16%  Similarity=0.197  Sum_probs=42.9

Q ss_pred             CCCcHHHHHHHHHHHHhCCCCChhHHHHHHHHHhHhccccccccccccccCCCCCC
Q 027276          147 CGNNRDYLFKLEKAMFDIGHEDDYIIELANEVRKELGTAEKGILKERKLVGSSSRM  202 (225)
Q Consensus       147 sG~N~eYL~~l~~~Lr~lgi~D~~L~~L~~~v~~~~~~~~~~~~~~~~~~~~~~~~  202 (225)
                      +-.|.||+.++...|+.-|++|...+++...+....-..++.--++..++|++|..
T Consensus         3 TkeNeefl~~L~~yL~~~glseeeieeiL~Ei~~hLlEgQk~GkTA~~IfG~sPk~   58 (254)
T PRK07668          3 SKEGRKFLDDTRVYLIAKGIKEEDIESFLEDAELHLIEGEKDGKTVEDIFGDSPKE   58 (254)
T ss_pred             CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHcCCcHHHHhCCCHHH
Confidence            34699999999999999999999999987666654433333334488999998764

>KOG4450 consensus Uncharacterized conserved protein [Function unknown]

Probab=83.64  E-value=1.8  Score=36.47  Aligned_cols=84  Identities=15%  Similarity=0.073  Sum_probs=57.1

Q ss_pred             EEEEccccccCCCCCCCceeeeEEeceEEEEEeecccCCCCCCCCceeee-------eeeCC--CCeEEEEEEEeeCCCc
Q 027276            4 WVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCT-------LEKSQ--ETICWGVAYCVRGGPE   74 (225)
Q Consensus         4 WVFgYGSLiW~p~f~~~e~~~a~l~Gy~R~F~~~S~~hRGTpe~PGrVlt-------L~~~~--gg~c~GvaYri~~~~~   74 (225)
                      -||-||.|=-...=++.-..  .+.|..+-++++.+.    -..| +|.+       |...+  |-.+.|=.|.|++   
T Consensus         8 lvFVYGTLKrg~pNh~~L~d--~~~g~A~F~gr~~T~----~kyP-LVigt~ynIPfLLnkpGsG~~V~GElY~Vd~---   77 (168)
T KOG4450|consen    8 LVFVYGTLKRGQPNHFLLED--LINGDAVFIGRGTTL----LKYP-LVIGTRYNIPFLLNKPGSGYHVEGELYEVDE---   77 (168)
T ss_pred             EEEEEeeecCCCCCchhhhh--ccCCceEEEEeceec----cccc-eEeecccCCceEEcCCCCcceeeeEEEEeCH---
Confidence            69999999766554443222  237887777766543    3344 5555       33333  4579999999994   


Q ss_pred             cHHHHHHHHHHHhh--cCCCcceEEEEe
Q 027276           75 KERLAMEYLERREC--EYDSKTLVDFYR  100 (225)
Q Consensus        75 ~~~e~l~~Ld~RE~--~~y~~~~v~v~~  100 (225)
                         .-|..||.-|.  ++|.|..+.+..
T Consensus        78 ---rmL~~LD~lE~~~~~Y~R~~i~v~~  102 (168)
T KOG4450|consen   78 ---RMLSRLDELEGCPNHYEREPIRVIE  102 (168)
T ss_pred             ---HHHhhhHhhcccHHHhhhhhhHHHH
Confidence               78999999997  478887766653

>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]

Probab=80.08  E-value=2.4  Score=37.10  Aligned_cols=51  Identities=27%  Similarity=0.498  Sum_probs=41.6

Q ss_pred             CCcHHHHHHHHHHHHhCCCCChhHHHH-HHHHHhHhccccccccccccccCCCC
Q 027276          148 GNNRDYLFKLEKAMFDIGHEDDYIIEL-ANEVRKELGTAEKGILKERKLVGSSS  200 (225)
Q Consensus       148 G~N~eYL~~l~~~Lr~lgi~D~~L~~L-~~~v~~~~~~~~~~~~~~~~~~~~~~  200 (225)
                      -.|.||+...-++|..-|-.|..+..+ ++.+-+++..+.+++- ++||+| +|
T Consensus        18 kkNqeyvh~vtkqli~~gksdeeik~Il~e~ipqIleeQkkGit-ARkL~g-tP   69 (226)
T COG4858          18 KKNQEYVHEVTKQLIGDGKSDEEIKIILEEMIPQILEEQKKGIT-ARKLLG-TP   69 (226)
T ss_pred             HHhHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhhccch-HHHHcC-Cc
Confidence            379999999999999999999999887 5555666666666665 899999 44

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	225
3cry_A	188	Gamma-glutamyl cyclotransferase; enzyme, oxoprolin	1e-07
2qik_A	285	UPF0131 protein YKQA; NESG, SR631, structural geno	2e-04

>3cry_A Gamma-glutamyl cyclotransferase; enzyme, oxoproline; 1.70A {Homo sapiens} PDB: 2pn7_A 2rbh_A 2i5t_A* 2q53_A Length = 188

 Score = 49.0 bits (116), Expect = 1e-07
 Identities = 23/164 (14%), Positives = 49/164 (29%), Gaps = 25/164 (15%)

Query: 3   FWVFGYGSL-------VWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLE 55
           F  F YGS        + NP   +       ++D++  F  +    + +        T+ 
Sbjct: 17  FLYFAYGSNLLTERIHLRNPSAAFFCV--ARLQDFKLDFGNS--QGKTSQTWHGGIATIF 72

Query: 56  KSQETICWGVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVF 115
           +S     WGV + +    +    +++  +  +        V    +        +     
Sbjct: 73  QSPGDEVWGVVWKM---NKSNLNSLDEQQGVKSGMYVVIEVKVATQEGKEITCRS----- 124

Query: 116 TSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEK 159
                 +   Y   P P  +  + I       G   +Y  KL+ 
Sbjct: 125 -----YLMTNYESAP-PSPQYKKIICMGAKENGLPLEYQEKLKA 162

>2qik_A UPF0131 protein YKQA; NESG, SR631, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CIT; 1.35A {Bacillus subtilis} Length = 285

 Score = 40.4 bits (94), Expect = 2e-04
 Identities = 31/180 (17%), Positives = 53/180 (29%), Gaps = 37/180 (20%)

Query: 1   MVFWVFGYGSLVWNPGFE------YDEKILG--FIKDYRRVFDLACIDHRGTPQHPARTC 52
              + F YGS + N  F+      Y +  +G   +K Y   F L   D          + 
Sbjct: 126 NPIYYFAYGSCMDNARFQKAGVDHYFQDPVGRAVLKGYTTRFTLKRED---------GSR 176

Query: 53  TLEKSQETICWGVAYCVRGGPEKERLAMEYLERRE---CEYDSKTLVDFYREGEPSQPAL 109
                      GV Y +   P      + YL +RE           VD    G   +  L
Sbjct: 177 ADMLEDGGTTEGVLYRI---PYSA---LSYLYKREGVESLTYRPAFVDVEAGGRHYKDCL 230

Query: 110 TGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAMFDIGHEDD 169
           T  +V     +    ++Y                      + ++  KL++ M  +    +
Sbjct: 231 T-FLVLQKEAEIAPPQHYQ----------IEIERGAELYLSPEFTEKLKRHMNSLPKGLE 279

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	225
3cry_A	188	Gamma-glutamyl cyclotransferase; enzyme, oxoprolin	99.95
2qik_A	285	UPF0131 protein YKQA; NESG, SR631, structural geno	99.94
2jqv_A	165	AT3G28950, AIG2 protein-like; structural genomics,	99.76
2g0q_A	173	AT5G39720.1 protein; structural genomics, protein	99.66
1xhs_A	121	Hypothetical UPF0131 protein YTFP; structure, auto	98.62
1v30_A	124	Hypothetical UPF0131 protein PH0828; alpha+beta, s	98.61
3jud_A	153	AIG2-like domain-containing protein 1; cyclotransf	98.52
1vkb_A	161	Hypothetical protein; gamma-glutamyl cyclotransfer	98.2
2qik_A	285	UPF0131 protein YKQA; NESG, SR631, structural geno	97.9

>3cry_A Gamma-glutamyl cyclotransferase; enzyme, oxoproline; 1.70A {Homo sapiens} PDB: 2pn7_A 2rbh_A 2i5t_A* 2q53_A

Probab=99.95  E-value=2.8e-28  Score=204.73  Aligned_cols=159  Identities=14%  Similarity=0.142  Sum_probs=120.9

Q ss_pred             CccEEEEccccccCCCCCC-----CceeeeEEeceEEEEEeecccCCCCCCCCceeeeeeeCCCCeEEEEEEEeeCCCcc
Q 027276            1 MVFWVFGYGSLVWNPGFEY-----DEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEK   75 (225)
Q Consensus         1 m~~WVFgYGSLiW~p~f~~-----~e~~~a~l~Gy~R~F~~~S~~hRGTpe~PGrVltL~~~~gg~c~GvaYri~~~~~~   75 (225)
                      +.+|||+||||||++.|..     ....+|+|+||+|.|++.|.+|  ++..+|.+++|++++++.|||++|+|+.    
T Consensus        15 ~~~~~FaYGSlm~~~~~~~~~~~~~~~~~a~l~gy~l~f~~~~~~~--~~~~~g~~~~lv~~~g~~V~G~ly~v~~----   88 (188)
T 3cry_A           15 ESFLYFAYGSNLLTERIHLRNPSAAFFCVARLQDFKLDFGNSQGKT--SQTWHGGIATIFQSPGDEVWGVVWKMNK----   88 (188)
T ss_dssp             CEEEEEECSGGGSHHHHHHHCTTCEEEEEEEEEEEEEEEEEETTCC--CTTTSSCEEEEEEEEEEEEEEEEEEEEG----
T ss_pred             CCEEEEEEccCCCHHHHHhhCCCCceEEEEEEcCEEEEECCCCCCC--cCCCCCeeEeEEeCCCCEEEEEEEEECH----
Confidence            3689999999999998754     2467999999999999998877  6777899999999889999999999995    


Q ss_pred             HHHHHHHHHHHhhc---CCCcceEEEEecCCCCCCceeEEEEEEEecCCCCCCCCCCCCCHHHHHHHHHhccCCCCCcHH
Q 027276           76 ERLAMEYLERRECE---YDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRD  152 (225)
Q Consensus        76 ~~e~l~~Ld~RE~~---~y~~~~v~v~~~~~~~~~~~~~alvYva~~~~~~n~~y~g~~~~e~~A~~I~~a~G~sG~N~e  152 (225)
                        +.++.||.||+.   .|.+..++|...++.    ...|++|++++   .++    ..|.++.+.+|+++.+.+|.+.|
T Consensus        89 --~~l~~LD~~Eg~~~g~Y~r~~v~V~~~~g~----~~~a~vYv~~~---~~~----~~ps~~Yl~~i~~g~~~~gl~~~  155 (188)
T 3cry_A           89 --SNLNSLDEQQGVKSGMYVVIEVKVATQEGK----EITCRSYLMTN---YES----APPSPQYKKIICMGAKENGLPLE  155 (188)
T ss_dssp             --GGHHHHHHHTTGGGTSCEEEEEEEEETTCC----EEEEEEEECSS---EEE----CCCCHHHHHHHHHHHHHTTCCHH
T ss_pred             --HHHHHHHHHhCCCCCcEEEEEEEEEeCCCC----EEEEEEEEecC---CCC----CCChHHHHHHHHHHHHHhCcCHH
Confidence              568999999983   799999999876542    25799999987   432    34556677777777777777777


Q ss_pred             HHHHHHHHHHhCCCCChhHHHHHHHHH
Q 027276          153 YLFKLEKAMFDIGHEDDYIIELANEVR  179 (225)
Q Consensus       153 YL~~l~~~Lr~lgi~D~~L~~L~~~v~  179 (225)
                      |+.+|.. +...|..-+.+.+|++.++
T Consensus       156 y~~~L~~-~~~~g~~~p~~~~~~~~~~  181 (188)
T 3cry_A          156 YQEKLKA-IEPNDYTGKVSEEIEDIIK  181 (188)
T ss_dssp             HHHHHHT-CCCCCCCSCCCHHHHHHHH
T ss_pred             HHHHHhc-ccccCCCCCCcHHHHHHHH
Confidence            7666543 2223444445555554443

>2qik_A UPF0131 protein YKQA; NESG, SR631, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CIT; 1.35A {Bacillus subtilis}

Probab=99.94  E-value=3.6e-27  Score=209.78  Aligned_cols=139  Identities=19%  Similarity=0.234  Sum_probs=116.8

Q ss_pred             ccEEEEccccccCCCCCCC-------c-eeeeEEeceEEEEEeecccCCCCCCCCceeeeeeeCCCCeEEEEEEEeeCCC
Q 027276            2 VFWVFGYGSLVWNPGFEYD-------E-KILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGP   73 (225)
Q Consensus         2 ~~WVFgYGSLiW~p~f~~~-------e-~~~a~l~Gy~R~F~~~S~~hRGTpe~PGrVltL~~~~gg~c~GvaYri~~~~   73 (225)
                      .+||||||||||++.|...       + ..+|+|+||+|+|| .+.+++       .++||+++ ++.|||++|+|+.  
T Consensus       127 ~~~yFaYGSnm~~~~~~~~~~p~~~~~~~~~a~L~G~~l~F~-~~~~~~-------g~a~iv~~-g~~v~Gvly~i~~--  195 (285)
T 2qik_A          127 PIYYFAYGSCMDNARFQKAGVDHYFQDPVGRAVLKGYTTRFT-LKREDG-------SRADMLED-GGTTEGVLYRIPY--  195 (285)
T ss_dssp             SEEEEECSGGGSSHHHHHHTCGGGSSCEEEEEEEETCEEEEE-EEETTE-------EEEEEECS-SCEEEEEEEEECG--
T ss_pred             cEEEEEechhcCHhhcccccCCcccceEeEEEEEeCeEEEcC-cCCCCC-------eeeeEEEC-CCEEEEEEEEECH--
Confidence            5899999999999998762       2 25899999999999 666654       46799998 9999999999995  


Q ss_pred             ccHHHHHHHHHHHhhc---CCCcceEEEEecCCCCCCceeEEEEEEEecCCCCCCCCCCCCCHHHHHHHHHhccCCCCCc
Q 027276           74 EKERLAMEYLERRECE---YDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNN  150 (225)
Q Consensus        74 ~~~~e~l~~Ld~RE~~---~y~~~~v~v~~~~~~~~~~~~~alvYva~~~~~~n~~y~g~~~~e~~A~~I~~a~G~sG~N  150 (225)
                          +.++.||.||+.   .|.+..++|...++.    ...|+|||+++   .++   +..|.++++.+|+++.+ +|.+
T Consensus       196 ----~~l~~LD~~Eg~~~g~Y~r~~v~v~~~~g~----~~~a~~Yv~~~---~~~---~~~Ps~~Yl~~i~~g~~-~g~~  260 (285)
T 2qik_A          196 ----SALSYLYKREGVESLTYRPAFVDVEAGGRH----YKDCLTFLVLQ---KEA---EIAPPQHYQIEIERGAE-LYLS  260 (285)
T ss_dssp             ----GGHHHHHHHTTTTTTSEEEEEEEEEETTEE----EEEEEEEEESS---CCC---CCCCCHHHHHHHHHHHH-HHSC
T ss_pred             ----HHHHHHHHhhCCCCCceEEEEEEEEECCCC----EEEEEEEEecC---CCC---CCCCHHHHHHHHHHHHh-cCCC
Confidence                578999999973   599999999876531    25799999988   543   56788999999999999 9999


Q ss_pred             HHHHHHHHHHHHhCCC
Q 027276          151 RDYLFKLEKAMFDIGH  166 (225)
Q Consensus       151 ~eYL~~l~~~Lr~lgi  166 (225)
                      .|||.+|.++++.++-
T Consensus       261 ~~Y~~~l~~~~~~~~~  276 (285)
T 2qik_A          261 PEFTEKLKRHMNSLPK  276 (285)
T ss_dssp             HHHHHHHHHHHHHSCC
T ss_pred             HHHHHHHHHHHhhhhh
Confidence            9999999999998864

>2jqv_A AT3G28950, AIG2 protein-like; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Arabidopsis thaliana}

Probab=99.76  E-value=1.6e-18  Score=142.59  Aligned_cols=133  Identities=14%  Similarity=0.104  Sum_probs=95.4

Q ss_pred             CccEEEEccccccCCCCCC-----CceeeeEEeceEEEEEeecccCCCCCCCCceeeeeeeCCCCeEEEEEEE-eeCCCc
Q 027276            1 MVFWVFGYGSLVWNPGFEY-----DEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICWGVAYC-VRGGPE   74 (225)
Q Consensus         1 m~~WVFgYGSLiW~p~f~~-----~e~~~a~l~Gy~R~F~~~S~~hRGTpe~PGrVltL~~~~gg~c~GvaYr-i~~~~~   74 (225)
                      |.+|||+||||||.+.+++     ....+|+|+||+|.|++.       ...|++|.    ++++.|+|++|+ ++    
T Consensus         7 ~~~~vFvYGSL~~~~~~~~~~~~~~~~~~a~l~Gy~~~~~~~-------~~yP~lv~----~~~~~V~G~v~~~v~----   71 (165)
T 2jqv_A            7 QSHNVFVYGSILEPAVAAVILDRTADTVPAVLHGYHRYKLKG-------LPYPCIVS----SDSGKVNGKVITGVS----   71 (165)
T ss_dssp             SCEEEEESSTTSSHHHHHHHTSSCCEEEEEEEETCEECCCTT-------SSSCCEES----CCSSEEEEEEEEEEC----
T ss_pred             CceEEEEEcCCCCchhhHHHhCCCCccceEEEeCeEEEecCC-------CCCCEEEE----CCCCEEEEEEEEeCC----
Confidence            5689999999999998864     567899999999999743       25676654    568899999997 66    


Q ss_pred             cHHHHHHHHHHHhhcCCCcceEEEEecCCCCCCceeEEEEEEEecCCCCCCCCCCCCCHHHHHHHHHhccCCCCCcHHHH
Q 027276           75 KERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYL  154 (225)
Q Consensus        75 ~~~e~l~~Ld~RE~~~y~~~~v~v~~~~~~~~~~~~~alvYva~~~~~~n~~y~g~~~~e~~A~~I~~a~G~sG~N~eYL  154 (225)
                        ++.|+.||.||++.|.+..++|...++..   ...|++|+.+++  .++--.|+-+.++..+.         ...+|+
T Consensus        72 --~~~l~~LD~~E~~~Y~R~~v~v~~~dg~~---~~~a~vYv~~~~--~~~i~~G~W~~~~~~~~---------~~~~~~  135 (165)
T 2jqv_A           72 --DAELNNFDVIEGNDYERVTVEVVRMDNSE---KVKVETYVWVNK--DDPRMYGEWDFEEWRVV---------HAEKFV  135 (165)
T ss_dssp             --HHHHHHHHHTTTTSEEEEEEEEEETTTTE---EEEEEEEEETTT--TSCCSCSCCCHHHHHHH---------HHHHHH
T ss_pred             --HHHHHHHHHhccCCcEEEEEEEEECCCCe---EEEEEEEEECCC--cccccCCCcCHHHHHHH---------HHHHHH
Confidence              37899999999989999999998765421   246999999762  22333354455543221         225566


Q ss_pred             HHHHHHHHhC
Q 027276          155 FKLEKAMFDI  164 (225)
Q Consensus       155 ~~l~~~Lr~l  164 (225)
                      ..+...+..+
T Consensus       136 ~~t~~~~~~~  145 (165)
T 2jqv_A          136 ETFRKMLEWN  145 (165)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHhc
Confidence            5555554444

>2g0q_A AT5G39720.1 protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, unknown function; NMR {Arabidopsis thaliana}

Probab=99.66  E-value=5e-16  Score=129.26  Aligned_cols=135  Identities=19%  Similarity=0.198  Sum_probs=99.5

Q ss_pred             ccEEEEccccccCCCCCC-----CceeeeEEeceEEEEEeecccCCCCCCCCceeeeeeeCCCCeEEEEEEE-eeCCCcc
Q 027276            2 VFWVFGYGSLVWNPGFEY-----DEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICWGVAYC-VRGGPEK   75 (225)
Q Consensus         2 ~~WVFgYGSLiW~p~f~~-----~e~~~a~l~Gy~R~F~~~S~~hRGTpe~PGrVltL~~~~gg~c~GvaYr-i~~~~~~   75 (225)
                      .+|||+||||||.+.++.     ....+|+|+||+|.+ ..     | ...|++    ++++++.|+|++|. |+     
T Consensus        17 ~~~vFvYGSL~~~~~~~~~l~~~~~~~~A~l~Gy~l~~-~~-----~-~~yP~l----v~~~g~~V~G~v~~~v~-----   80 (173)
T 2g0q_A           17 LHNVFVYGSFQDPDVINVMLDRTPEIVSATLPGFQRFR-LK-----G-RLYPCI----VPSEKGEVHGKVLMGVT-----   80 (173)
T ss_dssp             SEEEEECSGGGCHHHHHHHTSSCCEEEEEEEETCEECC-CC-----S-SSCCCE----ECCTTCEEEEEEEEEEC-----
T ss_pred             CEEEEEEcCCCCCccCHHHhcCCCceeEEEEcCeEEEe-eC-----C-CeeeEE----EECCCCEEEEEEEEEcC-----
Confidence            589999999999996543     356899999999643 31     1 345654    45668899999975 76     


Q ss_pred             HHHHHHHHHHHhhcCCCcceEEEEecCCCCCCceeEEEEEEEecCCCCCCCCCCCCCHHHHHHHHHhccCCCCCcHHHHH
Q 027276           76 ERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLF  155 (225)
Q Consensus        76 ~~e~l~~Ld~RE~~~y~~~~v~v~~~~~~~~~~~~~alvYva~~~~~~n~~y~g~~~~e~~A~~I~~a~G~sG~N~eYL~  155 (225)
                       ++.++.||.+|...|.+..++|...++..   ...|++|+.+++  ..+++.+..+.++-.+.         ....|+.
T Consensus        81 -~~~l~~LD~~Eg~~Y~R~~v~V~~~dg~~---~v~A~vYv~~~~--~~~~~~~~~~~~~W~~~---------~~~~~~~  145 (173)
T 2g0q_A           81 -SDELENLDAVEGNEYERVTVGIVREDNSE---KMAVKTYMWINK--ADPDMFGEWNFEEWKRL---------HKKKFIE  145 (173)
T ss_dssp             -HHHHHHHHHHHTTTEEEEEEEEEESSSSC---EEEEEEEEESCS--SCSSSCCCCHHHHHHHH---------HHHHHHH
T ss_pred             -HHHHHHHHHHhhcCCEEEEEEEEECCCCe---EEEEEEEEEcCc--cccccCCCcCHHHHHHH---------hHHHHHH
Confidence             37999999999999999999998765322   257999999872  23567777777654432         2467888


Q ss_pred             HHHHHHHhCCCC
Q 027276          156 KLEKAMFDIGHE  167 (225)
Q Consensus       156 ~l~~~Lr~lgi~  167 (225)
                      ...+.++..+-+
T Consensus       146 ~~~~~m~~~~~p  157 (173)
T 2g0q_A          146 TFKKIMECKKKP  157 (173)
T ss_dssp             HHHHHHHHHTCC
T ss_pred             HHHHHHHhccCC
Confidence            888888887754

>1xhs_A Hypothetical UPF0131 protein YTFP; structure, autostructure, northeast structural genomics consortium, NESG, protein structure initiative, PSI; NMR {Escherichia coli} SCOP: d.269.1.1

Probab=98.62  E-value=1.2e-07  Score=74.37  Aligned_cols=88  Identities=16%  Similarity=0.141  Sum_probs=64.9

Q ss_pred             cEEEEccccccCCCCCC-----CceeeeEEeceEEEEEeecccCCCCCCCCceeeeeeeCCCCeEEEEEEEeeCCCccHH
Q 027276            3 FWVFGYGSLVWNPGFEY-----DEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKER   77 (225)
Q Consensus         3 ~WVFgYGSLiW~p~f~~-----~e~~~a~l~Gy~R~F~~~S~~hRGTpe~PGrVltL~~~~gg~c~GvaYri~~~~~~~~   77 (225)
                      +.||.|||||-......     .-..+|++.||+..+.       |  ..|+.+.+    ++ .|+|.+|+|+.      
T Consensus         1 ~~vFvYGTL~~g~~~~~~l~~a~~~g~a~l~gy~L~~~-------g--~yP~lv~~----~g-~V~Gevy~v~~------   60 (121)
T 1xhs_A            1 MRIFVYGSLRHKQGNSHWMTNAQLLGDFSIDNYQLYSL-------G--HYPGAVPG----NG-TVHGEVYRIDN------   60 (121)
T ss_dssp             CEEEECSCTTCCCTTTHHHHTCEEEEEEEEEEEEEEEC-------S--SSEEEEEE----EE-EEEEEEEECCH------
T ss_pred             CEEEEECCCCCcccchhhcCCCcEEEEEEEeCcEEEEe-------c--CCCeEEec----CC-EEEEEEEEeCH------
Confidence            36999999998666542     1225699999988755       2  36876643    34 99999999973      


Q ss_pred             HHHHHHHHHhh--cCCCcceEEEEecCCCCCCceeEEEEEEEec
Q 027276           78 LAMEYLERREC--EYDSKTLVDFYREGEPSQPALTGVIVFTSTP  119 (225)
Q Consensus        78 e~l~~Ld~RE~--~~y~~~~v~v~~~~~~~~~~~~~alvYva~~  119 (225)
                      +.|+.||.-|.  +.|.+..+++  .+       ..|.+|+..+
T Consensus        61 ~~l~~LD~~Eg~~~~Y~R~~v~~--~~-------g~a~vY~~~~   95 (121)
T 1xhs_A           61 ATLAELDALRTRGGEYARQLIQT--PY-------GSAWMYVYQR   95 (121)
T ss_dssp             HHHHHHHHHHSTTSCEEEEEEEE--TT-------EEEEEEEECS
T ss_pred             HHHHHHHHhcCCCCCEEEEEEEc--CC-------CEEEEEEECC
Confidence            78999999997  5788877763  21       2689999865

>1v30_A Hypothetical UPF0131 protein PH0828; alpha+beta, structural genomics, unknown function; HET: NHE; 1.40A {Pyrococcus horikoshii} SCOP: d.269.1.1

Probab=98.61  E-value=7.5e-08  Score=75.93  Aligned_cols=89  Identities=12%  Similarity=-0.006  Sum_probs=62.3

Q ss_pred             CccEEEEccccccCCCCCC-----CceeeeEEeceEEEEEeecccCCCCCCCCceeeeeeeCCCCeEEEEEEEeeCCCcc
Q 027276            1 MVFWVFGYGSLVWNPGFEY-----DEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEK   75 (225)
Q Consensus         1 m~~WVFgYGSLiW~p~f~~-----~e~~~a~l~Gy~R~F~~~S~~hRGTpe~PGrVltL~~~~gg~c~GvaYri~~~~~~   75 (225)
                      |.+.||.|||||-......     .-..+|.+.||++.  .      | . .|+.+.+    ++ .|+|.+|+|+.    
T Consensus         6 ~~~~vFVYGTL~~g~~n~~~l~~a~~~g~a~l~gy~L~--~------g-~-yP~lv~~----~g-~V~Gev~~v~~----   66 (124)
T 1v30_A            6 KSVRIAVYGTLRKGKPLHWYLKGAKFLGEDWIEGYQLY--F------E-Y-LPYAVKG----KG-KLKVEVYEVDK----   66 (124)
T ss_dssp             -CEEEEECSTTSTTSTTGGGGTTSEEEEEEEEEEEEEE--E------S-S-SEEEEEE----EE-EEEEEEEEECH----
T ss_pred             CccEEEEECCCCCchHhHHhcCCCcEEEEEEEeeEEEE--E------C-C-CCEEEec----CC-EEEEEEEEECH----
Confidence            5678999999998776542     12356889999877  2      2 1 7876643    33 49999999983    


Q ss_pred             HHHHHHHHHHHh-hcCCCcceEEEEecCCCCCCceeEEEEEEEec
Q 027276           76 ERLAMEYLERRE-CEYDSKTLVDFYREGEPSQPALTGVIVFTSTP  119 (225)
Q Consensus        76 ~~e~l~~Ld~RE-~~~y~~~~v~v~~~~~~~~~~~~~alvYva~~  119 (225)
                        +.|+.||..| ...|.+..|  ...++       .|.+|+..+
T Consensus        67 --~~l~~LD~~E~~~~Y~R~~V--~~~~g-------~A~vY~~~~  100 (124)
T 1v30_A           67 --ETFERINEIEIGTGYRLVEV--STKFG-------KAFLWEWGS  100 (124)
T ss_dssp             --HHHHHHTTCGGGGGEEEEEE--CCTTS-------CEEEEEECS
T ss_pred             --HHHHHhhhccCCCCeEEEEE--EcCCC-------EEEEEEeCC
Confidence              7899999999 566776653  22221       289999864

>3jud_A AIG2-like domain-containing protein 1; cyclotransferase, gamma-glutamylamine cyclotransferase, gamma-glutamyl-epsilon-lysine; 0.98A {Homo sapiens} SCOP: d.269.1.1 PDB: 3jub_A 3juc_A

Probab=98.52  E-value=2e-07  Score=76.00  Aligned_cols=107  Identities=14%  Similarity=0.166  Sum_probs=68.0

Q ss_pred             cEEEEccccccCCCCC-CCc---eeeeEEeceEEEEEeecccCCCCCCCCceee--------eeeeCCCCeEEEEEEEee
Q 027276            3 FWVFGYGSLVWNPGFE-YDE---KILGFIKDYRRVFDLACIDHRGTPQHPARTC--------TLEKSQETICWGVAYCVR   70 (225)
Q Consensus         3 ~WVFgYGSLiW~p~f~-~~e---~~~a~l~Gy~R~F~~~S~~hRGTpe~PGrVl--------tL~~~~gg~c~GvaYri~   70 (225)
                      -.||-||+|+-.-.-+ +-.   ...|.+.|-.+..          ...|+.++        ...+..|+.|+|.+|+|+
T Consensus         2 ~~vFVYGTL~~G~~Nh~~l~~~~~~~A~~~G~~~t~----------~~Ypl~~~g~~~~P~l~~~p~~g~~V~G~ly~v~   71 (153)
T 3jud_A            2 ALVFVYGTLKRGQPNHRVLRDGAHGSAAFRARGRTL----------EPYPLVIAGEHNIPWLLHLPGSGRLVEGEVYAVD   71 (153)
T ss_dssp             EEEEECSTTSTTSTTGGGGTCGGGCCEEEEEEEEES----------SCBCEEEETTTTEEEEBSCTTSSBCCEEEEEEEC
T ss_pred             CEEEEeCCCCCCCcChHHHhcCcCCCeEEEEEEEeC----------CCccEEEecCCCCceEEecCCCCCEEEEEEEEEC
Confidence            4699999999654322 111   2346666654321          23444432        222223568999999998


Q ss_pred             CCCccHHHHHHHHHHHhh--cCCCcceEEEEecCC-------CCCCceeEEEEEEEecCCCCCCCCC
Q 027276           71 GGPEKERLAMEYLERREC--EYDSKTLVDFYREGE-------PSQPALTGVIVFTSTPDKVSNKYYL  128 (225)
Q Consensus        71 ~~~~~~~e~l~~Ld~RE~--~~y~~~~v~v~~~~~-------~~~~~~~~alvYva~~~~~~n~~y~  128 (225)
                      +      +.|+.||+.|.  ..|.+..++|...+.       ...+..+.|++|+.+.   .++++.
T Consensus        72 ~------~~l~~LD~~Eg~~~~Y~R~~v~V~~~~~~~~~~~~~~~g~~v~A~vYv~~~---~~~~~~  129 (153)
T 3jud_A           72 E------RMLRFLDDFQSCPALYQRTVLRVQLLEDRAPGAEEPPAPTAVQCFVYSRAT---FPPEWA  129 (153)
T ss_dssp             H------HHHHHHHHHTTTTTSCEEEEEEEEEEC------CCSCCCCEEEEEEEEBCC---CCGGGG
T ss_pred             H------HHHHHHHHhcCCCCceEEEEEEEEeeccccccccccCCCCEEEEEEEEcCC---CCcccc
Confidence            3      79999999998  689999999976521       0112246899999876   555544

>1vkb_A Hypothetical protein; gamma-glutamyl cyclotransferase-like fold, structural genomi center for structural genomics, JCSG, protein structure INI PSI; 1.90A {Mus musculus} SCOP: d.269.1.1 PDB: 2kl2_A

Probab=98.20  E-value=2.2e-06  Score=70.27  Aligned_cols=99  Identities=15%  Similarity=0.144  Sum_probs=64.6

Q ss_pred             ccEEEEccccccCCC-CCCCc-------e--eee-EEeceEEEEEeecccCCCCCCCCceeeeeeeCCCCeEEEEEEEee
Q 027276            2 VFWVFGYGSLVWNPG-FEYDE-------K--ILG-FIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICWGVAYCVR   70 (225)
Q Consensus         2 ~~WVFgYGSLiW~p~-f~~~e-------~--~~a-~l~Gy~R~F~~~S~~hRGTpe~PGrVltL~~~~gg~c~GvaYri~   70 (225)
                      +..||-||+|+=... ..+-.       +  ..+ ++.||.-.|.-.       ...|  .+++++.+|..|+|.+|+|+
T Consensus        13 ~~~vFVYGTLk~G~~Nh~~l~~~r~~~A~~~G~~~tl~~YpL~~~g~-------~~~p--~~~i~p~~g~~V~Gevy~v~   83 (161)
T 1vkb_A           13 MAHIFVYGTLKRGQPNHKVMLDHSHGLAAFRGRGCTVESFPLVIAGE-------HNIP--WLLYLPGKGHCVTGEIYEVD   83 (161)
T ss_dssp             CEEEEECSTTSTTSTTTHHHHCGGGCCEEEEEEEEESSCBCEEEETT-------TTEE--EEESCTTSSBCCEEEEEEEC
T ss_pred             ceEEEEcCCCCCCCcChHHHhhCcCCCceEEEEEeecCCceEEEecC-------CCcc--eeEeecCCCCEEEEEEEEEC
Confidence            357999999983221 11111       1  122 345666555521       1123  36667766779999999999


Q ss_pred             CCCccHHHHHHHHHHHhh--cCCCcceEEEEe-------cCCCCCCceeEEEEEEEec
Q 027276           71 GGPEKERLAMEYLERREC--EYDSKTLVDFYR-------EGEPSQPALTGVIVFTSTP  119 (225)
Q Consensus        71 ~~~~~~~e~l~~Ld~RE~--~~y~~~~v~v~~-------~~~~~~~~~~~alvYva~~  119 (225)
                      .      +.|+.||.-|.  +.|.+..++|..       .++    ..+.|++|+.+.
T Consensus        84 ~------~~L~~LD~~Eg~p~~Y~R~~v~V~~~~~~~~~~~g----~~v~A~vYv~~~  131 (161)
T 1vkb_A           84 E------QMLRFLDDFEDCPSMYQRTALQVQVLEWEGDGDPG----DSVQCFVYTTAT  131 (161)
T ss_dssp             H------HHHHHHHHHTTTTTSCEEEEEEEEEEEEC----CC----SEEEEEEEEESC
T ss_pred             H------HHHHHHHHhcCCCCceEEEEEEEEecccccccCCC----CEEEEEEEEcCC
Confidence            4      78999999997  578888888865       222    135799999865

>2qik_A UPF0131 protein YKQA; NESG, SR631, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CIT; 1.35A {Bacillus subtilis}

Probab=97.90  E-value=4.8e-05  Score=67.10  Aligned_cols=93  Identities=15%  Similarity=0.147  Sum_probs=63.9

Q ss_pred             CccEEEEccccccCCCCCC----C--ceeeeEEeceEEEEEeecccCCCCCCCCceeeeeeeCCCCeEEEEEEEeeCCCc
Q 027276            1 MVFWVFGYGSLVWNPGFEY----D--EKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPE   74 (225)
Q Consensus         1 m~~WVFgYGSLiW~p~f~~----~--e~~~a~l~Gy~R~F~~~S~~hRGTpe~PGrVltL~~~~gg~c~GvaYri~~~~~   74 (225)
                      |+..||-||||+=....+.    .  ...+++++|  |-+..+        ..||++.  .+..++.|.|-+|+|+.   
T Consensus         1 m~~~vFVYGTL~~g~~n~~~l~~~~~~~~~~~~~g--~L~~~g--------~~P~lv~--~~~~~~~V~Gev~~v~~---   65 (285)
T 2qik_A            1 MNSLLFVYGTLRKHEKNHHLLAQSACINEQARTKG--SLFAAK--------EGPTVVF--NDEDEGYIYGEVYEADE---   65 (285)
T ss_dssp             CCEEEEECSTTSTTSTTGGGGTTCEEEEEEEEEES--EEEEC----------CEEEEC--CTTCCSEEEEEEEEECH---
T ss_pred             CCcEEEEECCCCCCCcChHHhCCCeEeeeeEEEEE--EEEEcC--------CCCeEEE--ccCCCCEEEEEEEEcCH---
Confidence            7889999999996654432    1  124678876  444322        1477663  22247899999999983   


Q ss_pred             cHHHHHHHHHHHhh--cCCCcceEEEEecCCCCCCceeEEEEEEEec
Q 027276           75 KERLAMEYLERREC--EYDSKTLVDFYREGEPSQPALTGVIVFTSTP  119 (225)
Q Consensus        75 ~~~e~l~~Ld~RE~--~~y~~~~v~v~~~~~~~~~~~~~alvYva~~  119 (225)
                         +   .||.-|.  +.|.|..++|...++     ...|.+|+.++
T Consensus        66 ---~---~LD~~E~~~~~Y~R~~v~v~~~~g-----~~~a~vY~~~~  101 (285)
T 2qik_A           66 ---L---CIHKLDQFFQGYHKQTVFVETDVG-----IKIALIYFMNK  101 (285)
T ss_dssp             ---H---HHHHHHHHSTTCEEEEEEEEETTE-----EEEEEEEECC-
T ss_pred             ---H---HhHHhcCCCCceeEEEEEEEcCCC-----EEEEEEEEecc
Confidence               2   7999997  689998888877553     14799999876

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	225
d1vkba_	151	Hypothetical protein LOC223267 {Mouse (Mus musculu	98.84
d1xhsa_	113	Hypothetical protein YtfP {Escherichia coli [TaxId	98.44
d1v30a_	118	Hypothetical protein PH0828 {Pyrococcus horikoshii	97.92

>d1vkba_ d.269.1.1 (A:) Hypothetical protein LOC223267 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Gamma-glutamyl cyclotransferase-like
superfamily: Gamma-glutamyl cyclotransferase-like
family: Gamma-glutamyl cyclotransferase-like
domain: Hypothetical protein LOC223267
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.84  E-value=2.4e-09  Score=84.85  Aligned_cols=109  Identities=14%  Similarity=0.074  Sum_probs=68.9

Q ss_pred             cEEEEccccccCCCCCC----CceeeeEEeceEEEEEeecccCCCCCCCCceeeeeeeCCCCeEEEEEEEeeCCCccHHH
Q 027276            3 FWVFGYGSLVWNPGFEY----DEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERL   78 (225)
Q Consensus         3 ~WVFgYGSLiW~p~f~~----~e~~~a~l~Gy~R~F~~~S~~hRGTpe~PGrVltL~~~~gg~c~GvaYri~~~~~~~~e   78 (225)
                      ..||.|||||.....+.    .....+.+.|..+.........-|....|+.+..  ++.+..|+|.+|.|+.      +
T Consensus         4 ~~lFvYGTL~~g~~n~~~l~~~~~~~a~~~g~~~t~~~~~l~~~g~~~yP~l~~~--~~~~~~V~G~l~~v~~------~   75 (151)
T d1vkba_           4 AHIFVYGTLKRGQPNHKVMLDHSHGLAAFRGRGCTVESFPLVIAGEHNIPWLLYL--PGKGHCVTGEIYEVDE------Q   75 (151)
T ss_dssp             EEEEECSTTSTTSTTTHHHHCGGGCCEEEEEEEEESSCBCEEEETTTTEEEEESC--TTSSBCCEEEEEEECH------H
T ss_pred             CEEEEEcCCCCCCcChHHHhccccCcceEEEEEEEccceeEEEeCCCCcCEEEee--CCCCcEEEEEEEEcCH------H
Confidence            36999999986443221    1223355555554332222222244556766542  3445689999999984      7


Q ss_pred             HHHHHHHHhh--cCCCcceEEEEecCC---CCCCceeEEEEEEEec
Q 027276           79 AMEYLERREC--EYDSKTLVDFYREGE---PSQPALTGVIVFTSTP  119 (225)
Q Consensus        79 ~l~~Ld~RE~--~~y~~~~v~v~~~~~---~~~~~~~~alvYva~~  119 (225)
                      .|+.||..|+  +.|+|..|+|...+.   ......+.|.+|+...
T Consensus        76 ~l~~LD~~Eg~~~~Y~R~~v~V~l~~~~~~~~~g~~v~A~vY~~~~  121 (151)
T d1vkba_          76 MLRFLDDFEDCPSMYQRTALQVQVLEWEGDGDPGDSVQCFVYTTAT  121 (151)
T ss_dssp             HHHHHHHHTTTTTSCEEEEEEEEEEEEC----CCSEEEEEEEEESC
T ss_pred             HHHhhHHhcCCCCceEEEEEEEEeccccccCCCCCEEEEEEEECCC
Confidence            8999999998  679999998875321   1112236899999876

>d1xhsa_ d.269.1.1 (A:) Hypothetical protein YtfP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Gamma-glutamyl cyclotransferase-like
superfamily: Gamma-glutamyl cyclotransferase-like
family: Gamma-glutamyl cyclotransferase-like
domain: Hypothetical protein YtfP
species: Escherichia coli [TaxId: 562]

Probab=98.44  E-value=7.5e-07  Score=66.73  Aligned_cols=88  Identities=15%  Similarity=0.105  Sum_probs=62.9

Q ss_pred             cEEEEccccccCCCCCC-----CceeeeEEeceEEEEEeecccCCCCCCCCceeeeeeeCCCCeEEEEEEEeeCCCccHH
Q 027276            3 FWVFGYGSLVWNPGFEY-----DEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKER   77 (225)
Q Consensus         3 ~WVFgYGSLiW~p~f~~-----~e~~~a~l~Gy~R~F~~~S~~hRGTpe~PGrVltL~~~~gg~c~GvaYri~~~~~~~~   77 (225)
                      |-||.|||||=....+.     .-..+|.++||+..+.         ...|+.+.     .++.|+|..|.|+.      
T Consensus         1 m~lFvYGTL~~g~~~~~~l~~~~~~~~~~~~g~~l~~~---------~~yP~lv~-----~~~~V~Gely~v~~------   60 (113)
T d1xhsa_           1 MRIFVYGSLRHKQGNSHWMTNAQLLGDFSIDNYQLYSL---------GHYPGAVP-----GNGTVHGEVYRIDN------   60 (113)
T ss_dssp             CEEEECSCTTCCCTTTHHHHTCEEEEEEEEEEEEEEEC---------SSSEEEEE-----EEEEEEEEEEECCH------
T ss_pred             CEEEEEcCCCCCCcChhhhCCCcEEeEEEEeeeEEecc---------CCCCEEEe-----CCCcEEEEEEEECH------
Confidence            46999999995544331     2235789999976544         23787654     25689999999983      


Q ss_pred             HHHHHHHHHhhc--CCCcceEEEEecCCCCCCceeEEEEEEEec
Q 027276           78 LAMEYLERRECE--YDSKTLVDFYREGEPSQPALTGVIVFTSTP  119 (225)
Q Consensus        78 e~l~~Ld~RE~~--~y~~~~v~v~~~~~~~~~~~~~alvYva~~  119 (225)
                      +.++.||.-|..  .|.+..+++.  .       ..|.+|+.+.
T Consensus        61 ~~l~~LD~~Eg~~~~Y~R~~v~v~--~-------~~a~vY~~~~   95 (113)
T d1xhsa_          61 ATLAELDALRTRGGEYARQLIQTP--Y-------GSAWMYVYQR   95 (113)
T ss_dssp             HHHHHHHHHHSTTSCEEEEEEEET--T-------EEEEEEEECS
T ss_pred             HHHHHhhcccCCCCcEEEEEEEEe--c-------ceEEEEEEcC
Confidence            689999999974  4777776652  1       2589999976

>d1v30a_ d.269.1.1 (A:) Hypothetical protein PH0828 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a+b)
fold: Gamma-glutamyl cyclotransferase-like
superfamily: Gamma-glutamyl cyclotransferase-like
family: Gamma-glutamyl cyclotransferase-like
domain: Hypothetical protein PH0828
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=97.92  E-value=6.9e-06  Score=62.26  Aligned_cols=88  Identities=13%  Similarity=-0.011  Sum_probs=60.2

Q ss_pred             ccEEEEccccccCCCCCC-----CceeeeEEeceEEEEEeecccCCCCCCCCceeeeeeeCCCCeEEEEEEEeeCCCccH
Q 027276            2 VFWVFGYGSLVWNPGFEY-----DEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKE   76 (225)
Q Consensus         2 ~~WVFgYGSLiW~p~f~~-----~e~~~a~l~Gy~R~F~~~S~~hRGTpe~PGrVltL~~~~gg~c~GvaYri~~~~~~~   76 (225)
                      ++-||-||||+=...-..     .-..+|+++||.+- .         ...|+.+.+     ++.|.|-.|+|+.     
T Consensus         1 ~~rvFVYGTL~~g~~n~~~l~~~~~i~~a~~~g~~~~-~---------~~yP~~v~~-----~g~V~Gevy~v~~-----   60 (118)
T d1v30a_           1 SVRIAVYGTLRKGKPLHWYLKGAKFLGEDWIEGYQLY-F---------EYLPYAVKG-----KGKLKVEVYEVDK-----   60 (118)
T ss_dssp             CEEEEECSTTSTTSTTGGGGTTSEEEEEEEEEEEEEE-E---------SSSEEEEEE-----EEEEEEEEEEECH-----
T ss_pred             CcEEEEECCCCCCCCChHHhCCCcEEEEEEEeeeEee-c---------CCCCEEEeC-----CCCEEEEEEEECH-----
Confidence            467999999984433221     11347999998653 2         137887652     4689999999983     


Q ss_pred             HHHHHHHHHHhhc-CCCcceEEEEecCCCCCCceeEEEEEEEec
Q 027276           77 RLAMEYLERRECE-YDSKTLVDFYREGEPSQPALTGVIVFTSTP  119 (225)
Q Consensus        77 ~e~l~~Ld~RE~~-~y~~~~v~v~~~~~~~~~~~~~alvYva~~  119 (225)
                       +.|+.||.-|.. .|.+..+++  .   .    ..|.+|+.++
T Consensus        61 -~~l~~LD~~Eg~~~Y~R~~v~~--~---~----~~awvY~y~~   94 (118)
T d1v30a_          61 -ETFERINEIEIGTGYRLVEVST--K---F----GKAFLWEWGS   94 (118)
T ss_dssp             -HHHHHHTTCGGGGGEEEEEECC--T---T----SCEEEEEECS
T ss_pred             -HHHHhhccccCCCCeEEEEEEc--c---c----eeEEEEEEcC
Confidence             789999999974 466544432  1   1    3589999977