BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027277
(225 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4AEC|A Chain A, Crystal Structure Of The Arabidopsis Thaliana O-Acetyl-
Serine-(Thiol)-Lyase C
pdb|4AEC|B Chain B, Crystal Structure Of The Arabidopsis Thaliana O-Acetyl-
Serine-(Thiol)-Lyase C
Length = 430
Score = 291 bits (744), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 140/222 (63%), Positives = 169/222 (76%)
Query: 1 MPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEI 60
MP++ S+ERR++L+A GAE+ L DPA G G V+K EEIL TP+ Y+L QF+NPANP+I
Sbjct: 205 MPASMSMERRVLLKAFGAELVLTDPAKGMTGAVQKAEEILKNTPDAYMLQQFDNPANPKI 264
Query: 61 HYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEPSESAVLNGG 120
HYETTGPEIW+D+ GKVD F RF+KEKNP +V G+EP+ES +L+GG
Sbjct: 265 HYETTGPEIWDDTKGKVDIFVAGIGTGGTITGVGRFIKEKNPKTQVIGVEPTESDILSGG 324
Query: 121 QPGKHLIQGIGAGVIPPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLVGISSGXXXXX 180
+PG H IQGIGAG IP LD ++DEVI +SSEEAIET+K LALKEGL+VGISSG
Sbjct: 325 KPGPHKIQGIGAGFIPKNLDQKIMDEVIAISSEEAIETAKQLALKEGLMVGISSGAAAAA 384
Query: 181 XIRVAKRPENAGKLIVVIFPSAGERYLSTALFESIRHEVENM 222
I+VAKRPENAGKLI V+FPS GERYLST LF+SIR EVE M
Sbjct: 385 AIKVAKRPENAGKLIAVVFPSFGERYLSTPLFQSIREEVEKM 426
>pdb|1Z7Y|A Chain A, Crystal Structure Of The Arabidopsis Thaliana
O-Acetylserine Sulfhydrylase K46a Mutant
Length = 322
Score = 280 bits (716), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 134/225 (59%), Positives = 168/225 (74%)
Query: 1 MPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEI 60
MP++ S ERRIIL A G E+ L DPA G +G + K EEIL +TPNGY+L QFENPANP+I
Sbjct: 97 MPASMSTERRIILLAFGVELVLTDPAKGMKGAIAKAEEILAKTPNGYMLQQFENPANPKI 156
Query: 61 HYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEPSESAVLNGG 120
HYETTGPEIW +GGK+D F ++LKE+N N+K+YG+EP ESA+L+GG
Sbjct: 157 HYETTGPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVEPVESAILSGG 216
Query: 121 QPGKHLIQGIGAGVIPPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLVGISSGXXXXX 180
+PG H IQGIGAG IP VL+V ++DEV+ VSS+E+I+ ++ LALKEGLLVGISSG
Sbjct: 217 KPGPHKIQGIGAGFIPSVLNVDLIDEVVQVSSDESIDMARQLALKEGLLVGISSGAAAAA 276
Query: 181 XIRVAKRPENAGKLIVVIFPSAGERYLSTALFESIRHEVENMPID 225
I++A+RPENAGKL V IFPS GERYLST LF++ R E E M +
Sbjct: 277 AIKLAQRPENAGKLFVAIFPSFGERYLSTVLFDATRKEAEAMTFE 321
>pdb|1Z7W|A Chain A, Crystal Structure Of O-Acetylserine Sulfhydrylase From
Arabidopsis Thaliana
Length = 322
Score = 280 bits (715), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 134/225 (59%), Positives = 168/225 (74%)
Query: 1 MPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEI 60
MP++ S ERRIIL A G E+ L DPA G +G + K EEIL +TPNGY+L QFENPANP+I
Sbjct: 97 MPASMSTERRIILLAFGVELVLTDPAKGMKGAIAKAEEILAKTPNGYMLQQFENPANPKI 156
Query: 61 HYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEPSESAVLNGG 120
HYETTGPEIW +GGK+D F ++LKE+N N+K+YG+EP ESA+L+GG
Sbjct: 157 HYETTGPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVEPVESAILSGG 216
Query: 121 QPGKHLIQGIGAGVIPPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLVGISSGXXXXX 180
+PG H IQGIGAG IP VL+V ++DEV+ VSS+E+I+ ++ LALKEGLLVGISSG
Sbjct: 217 KPGPHKIQGIGAGFIPSVLNVDLIDEVVQVSSDESIDMARQLALKEGLLVGISSGAAAAA 276
Query: 181 XIRVAKRPENAGKLIVVIFPSAGERYLSTALFESIRHEVENMPID 225
I++A+RPENAGKL V IFPS GERYLST LF++ R E E M +
Sbjct: 277 AIKLAQRPENAGKLFVAIFPSFGERYLSTVLFDATRKEAEAMTFE 321
>pdb|2ISQ|A Chain A, Crystal Structure Of O-Acetylserine Sulfhydrylase From
Arabidopsis Thaliana In Complex With C-Terminal Peptide
From Arabidopsis Serine Acetyltransferase
Length = 320
Score = 279 bits (714), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 134/225 (59%), Positives = 168/225 (74%)
Query: 1 MPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEI 60
MP++ S ERRIIL A G E+ L DPA G +G + K EEIL +TPNGY+L QFENPANP+I
Sbjct: 95 MPASMSTERRIILLAFGVELVLTDPAKGMKGAIAKAEEILAKTPNGYMLQQFENPANPKI 154
Query: 61 HYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEPSESAVLNGG 120
HYETTGPEIW +GGK+D F ++LKE+N N+K+YG+EP ESA+L+GG
Sbjct: 155 HYETTGPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVEPVESAILSGG 214
Query: 121 QPGKHLIQGIGAGVIPPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLVGISSGXXXXX 180
+PG H IQGIGAG IP VL+V ++DEV+ VSS+E+I+ ++ LALKEGLLVGISSG
Sbjct: 215 KPGPHKIQGIGAGFIPSVLNVDLIDEVVQVSSDESIDMARQLALKEGLLVGISSGAAAAA 274
Query: 181 XIRVAKRPENAGKLIVVIFPSAGERYLSTALFESIRHEVENMPID 225
I++A+RPENAGKL V IFPS GERYLST LF++ R E E M +
Sbjct: 275 AIKLAQRPENAGKLFVAIFPSFGERYLSTVLFDATRKEAEAMTFE 319
>pdb|3VC3|A Chain A, Crystal Structure Of Beta-Cyanoalanine Synthase K95a
Mutant In Soybean
pdb|3VC3|B Chain B, Crystal Structure Of Beta-Cyanoalanine Synthase K95a
Mutant In Soybean
pdb|3VC3|C Chain C, Crystal Structure Of Beta-Cyanoalanine Synthase K95a
Mutant In Soybean
pdb|3VC3|D Chain D, Crystal Structure Of Beta-Cyanoalanine Synthase K95a
Mutant In Soybean
pdb|3VC3|E Chain E, Crystal Structure Of Beta-Cyanoalanine Synthase K95a
Mutant In Soybean
pdb|3VC3|F Chain F, Crystal Structure Of Beta-Cyanoalanine Synthase K95a
Mutant In Soybean
Length = 344
Score = 256 bits (654), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 120/222 (54%), Positives = 158/222 (71%)
Query: 1 MPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEI 60
MPS S+ERR+ +RA GAE+ L DPA G G VKK E+L TPN ++L QF NPAN ++
Sbjct: 117 MPSYTSLERRVTMRAFGAELILTDPAKGMGGTVKKAYELLENTPNAHMLQQFSNPANTQV 176
Query: 61 HYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEPSESAVLNGG 120
H+ETTGPEIW D+ G+VD F ++LK KNPN+K+YG+EPSES VLNGG
Sbjct: 177 HFETTGPEIWEDTNGQVDIFVMGIGSGGTVSGVGQYLKSKNPNVKIYGVEPSESNVLNGG 236
Query: 121 QPGKHLIQGIGAGVIPPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLVGISSGXXXXX 180
+PG H I G G G P +LD+ ++++V+ VSSE+A+ +++LALKEGL+VGISSG
Sbjct: 237 KPGPHHITGNGVGFKPDILDLDVMEKVLEVSSEDAVNMARVLALKEGLMVGISSGANTVA 296
Query: 181 XIRVAKRPENAGKLIVVIFPSAGERYLSTALFESIRHEVENM 222
+R+A+ PEN GKLIV + PS GERYLS+ LF+ +R E ENM
Sbjct: 297 ALRLAQLPENKGKLIVTVHPSFGERYLSSVLFQELRQEAENM 338
>pdb|3VBE|A Chain A, Crystal Structure Of Beta-Cyanoalanine Synthase In Soybean
pdb|3VBE|B Chain B, Crystal Structure Of Beta-Cyanoalanine Synthase In Soybean
pdb|3VBE|C Chain C, Crystal Structure Of Beta-Cyanoalanine Synthase In Soybean
pdb|3VBE|D Chain D, Crystal Structure Of Beta-Cyanoalanine Synthase In Soybean
Length = 344
Score = 256 bits (654), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 120/222 (54%), Positives = 158/222 (71%)
Query: 1 MPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEI 60
MPS S+ERR+ +RA GAE+ L DPA G G VKK E+L TPN ++L QF NPAN ++
Sbjct: 117 MPSYTSLERRVTMRAFGAELILTDPAKGMGGTVKKAYELLENTPNAHMLQQFSNPANTQV 176
Query: 61 HYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEPSESAVLNGG 120
H+ETTGPEIW D+ G+VD F ++LK KNPN+K+YG+EPSES VLNGG
Sbjct: 177 HFETTGPEIWEDTNGQVDIFVMGIGSGGTVSGVGQYLKSKNPNVKIYGVEPSESNVLNGG 236
Query: 121 QPGKHLIQGIGAGVIPPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLVGISSGXXXXX 180
+PG H I G G G P +LD+ ++++V+ VSSE+A+ +++LALKEGL+VGISSG
Sbjct: 237 KPGPHHITGNGVGFKPDILDLDVMEKVLEVSSEDAVNMARVLALKEGLMVGISSGANTVA 296
Query: 181 XIRVAKRPENAGKLIVVIFPSAGERYLSTALFESIRHEVENM 222
+R+A+ PEN GKLIV + PS GERYLS+ LF+ +R E ENM
Sbjct: 297 ALRLAQLPENKGKLIVTVHPSFGERYLSSVLFQELRQEAENM 338
>pdb|3RR2|A Chain A, Structure Of A Cysteine Synthase (O-Acetylserine
Sulfhydrylase (Oass)) From Mycobacterium Marinum Atcc
Baa-535 M
Length = 314
Score = 213 bits (543), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 107/215 (49%), Positives = 140/215 (65%)
Query: 1 MPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEI 60
MP T SIERR++LRA GAE+ L A G G + K EE+ +I QFENPANP +
Sbjct: 98 MPDTMSIERRMLLRAYGAELVLTPGAEGMAGAIAKAEELAKTDDRYFIPQQFENPANPAV 157
Query: 61 HYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEPSESAVLNGG 120
H TT E+W D+ GKVD F + +K++ P+ + +EP+ S VL+GG
Sbjct: 158 HAVTTAEEVWRDTDGKVDIFVSGVGTGGTITGVAQVIKQRRPSAQFVAVEPAASPVLSGG 217
Query: 121 QPGKHLIQGIGAGVIPPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLVGISSGXXXXX 180
Q G H IQGIGAG +PPVLD+A++DEVITV +++A+E ++ +A +EGLLVGISSG
Sbjct: 218 QKGPHPIQGIGAGFVPPVLDLALVDEVITVGNDDALELARRMATEEGLLVGISSGAAVWA 277
Query: 181 XIRVAKRPENAGKLIVVIFPSAGERYLSTALFESI 215
+A RPENAGKLIVV+ P GERYLST LF +
Sbjct: 278 ARELAHRPENAGKLIVVVLPDFGERYLSTVLFADL 312
>pdb|2Q3D|A Chain A, 2.2 A Resolution Crystal Structure Of O-acetylserine
Sulfhydrylase (oass) From Mycobacterium Tuberculosis In
Complex With The Reaction Intermediate
Alpha-aminoacrylate
Length = 313
Score = 213 bits (541), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 106/215 (49%), Positives = 139/215 (64%)
Query: 1 MPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEI 60
MP T S+ERR++LRA GAE+ L A G G + K EE+ ++ QFENPANP I
Sbjct: 97 MPETMSLERRMLLRAYGAELILTPGADGMSGAIAKAEELAKTDQRYFVPQQFENPANPAI 156
Query: 61 HYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEPSESAVLNGG 120
H TT E+W D+ GKVD + +KE+ P+ + +EP+ S VL+GG
Sbjct: 157 HRVTTAEEVWRDTDGKVDIVVAGVGTGGTITGVAQVIKERKPSARFVAVEPAASPVLSGG 216
Query: 121 QPGKHLIQGIGAGVIPPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLVGISSGXXXXX 180
Q G H IQGIGAG +PPVLD ++DE+ITV +E+A+ ++ LA +EGLLVGISSG
Sbjct: 217 QKGPHPIQGIGAGFVPPVLDQDLVDEIITVGNEDALNVARRLAREEGLLVGISSGAATVA 276
Query: 181 XIRVAKRPENAGKLIVVIFPSAGERYLSTALFESI 215
++VA+RPENAGKLIVV+ P GERYLST LF +
Sbjct: 277 ALQVARRPENAGKLIVVVLPDFGERYLSTPLFADV 311
>pdb|2Q3B|A Chain A, 1.8 A Resolution Crystal Structure Of O-Acetylserine
Sulfhydrylase (Oass) Holoenzyme From Mycobacterium
Tuberculosis
pdb|2Q3C|A Chain A, 2.1 A Resolution Crystal Structure Of O-Acetylserine
Sulfhydrylase (Oass) Holoenzyme From Mycobacterium
Tuberculosis In Complex With The Inhibitory Peptide Dfsi
Length = 313
Score = 213 bits (541), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 106/215 (49%), Positives = 139/215 (64%)
Query: 1 MPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEI 60
MP T S+ERR++LRA GAE+ L A G G + K EE+ ++ QFENPANP I
Sbjct: 97 MPETMSLERRMLLRAYGAELILTPGADGMSGAIAKAEELAKTDQRYFVPQQFENPANPAI 156
Query: 61 HYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEPSESAVLNGG 120
H TT E+W D+ GKVD + +KE+ P+ + +EP+ S VL+GG
Sbjct: 157 HRVTTAEEVWRDTDGKVDIVVAGVGTGGTITGVAQVIKERKPSARFVAVEPAASPVLSGG 216
Query: 121 QPGKHLIQGIGAGVIPPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLVGISSGXXXXX 180
Q G H IQGIGAG +PPVLD ++DE+ITV +E+A+ ++ LA +EGLLVGISSG
Sbjct: 217 QKGPHPIQGIGAGFVPPVLDQDLVDEIITVGNEDALNVARRLAREEGLLVGISSGAATVA 276
Query: 181 XIRVAKRPENAGKLIVVIFPSAGERYLSTALFESI 215
++VA+RPENAGKLIVV+ P GERYLST LF +
Sbjct: 277 ALQVARRPENAGKLIVVVLPDFGERYLSTPLFADV 311
>pdb|4I1Y|A Chain A, The Structure Of Cysteine Synthase From Mycobacterium
Ulcerans Agy99
pdb|4I1Y|B Chain B, The Structure Of Cysteine Synthase From Mycobacterium
Ulcerans Agy99
pdb|4I1Y|C Chain C, The Structure Of Cysteine Synthase From Mycobacterium
Ulcerans Agy99
pdb|4I1Y|D Chain D, The Structure Of Cysteine Synthase From Mycobacterium
Ulcerans Agy99
Length = 314
Score = 211 bits (537), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 106/215 (49%), Positives = 139/215 (64%)
Query: 1 MPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEI 60
MP T SIERR++LRA GAE+ L A G G + K EE+ +I QFENPANP +
Sbjct: 98 MPDTMSIERRMLLRAYGAELVLTPGAEGMAGAIAKAEELAKTDDRYFIPQQFENPANPAV 157
Query: 61 HYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEPSESAVLNGG 120
H TT E+W D+ GKVD F + +K++ P+ + +EP+ S VL+GG
Sbjct: 158 HAVTTAEEVWRDTDGKVDIFVSGVGTGGTITGVAQVIKQRRPSAQFVAVEPAASPVLSGG 217
Query: 121 QPGKHLIQGIGAGVIPPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLVGISSGXXXXX 180
Q G H IQGIGAG +PPVLD+A++DEVITV +++A+E ++ +A +EGLL GISSG
Sbjct: 218 QKGPHPIQGIGAGFVPPVLDLALVDEVITVGNDDALELARRMATEEGLLFGISSGAAVWA 277
Query: 181 XIRVAKRPENAGKLIVVIFPSAGERYLSTALFESI 215
+A RPENAGKLIVV+ P GERYLST LF +
Sbjct: 278 ARELAHRPENAGKLIVVVLPDFGERYLSTVLFADL 312
>pdb|4AIR|A Chain A, Leishmania Major Cysteine Synthase
pdb|4AIR|B Chain B, Leishmania Major Cysteine Synthase
Length = 354
Score = 197 bits (501), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 98/224 (43%), Positives = 134/224 (59%)
Query: 1 MPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEI 60
MP + S+ERR +LR GAEV L A+G +G V ++I+ PN + QF N I
Sbjct: 123 MPESMSLERRCLLRIFGAEVILTPAALGMKGAVTMAKKIVTANPNAVLADQFATKYNALI 182
Query: 61 HYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEPSESAVLNGG 120
H ETTGPEIW + VD F R LK+ + ++ +EP ES VL+GG
Sbjct: 183 HEETTGPEIWEQTNHNVDCFIAGVGTGGTLTGVARALKKMGSHARIVAVEPMESPVLSGG 242
Query: 121 QPGKHLIQGIGAGVIPPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLVGISSGXXXXX 180
+PG H IQGIG G +P VLD +++DEV V+ ++AIET+ L +G+ G S G
Sbjct: 243 KPGAHKIQGIGPGFVPDVLDRSLIDEVFCVAGDDAIETALKLTRSDGVFCGFSGGANVYA 302
Query: 181 XIRVAKRPENAGKLIVVIFPSAGERYLSTALFESIRHEVENMPI 224
+++A+RPE GK IV I PS GERYLSTAL+ S+R EV ++P+
Sbjct: 303 ALKIAERPEMEGKTIVTIIPSFGERYLSTALYRSVRDEVSSLPV 346
>pdb|3T4P|A Chain A, Crystal Structure Of O-Acetyl Serine Sulfhydrylase From
Leishmania Donovani In Complex With Designed
Tetrapeptide
pdb|3TBH|A Chain A, Crystal Structure Of O-Acetyl Serine Sulfhydrylase In
Complex With Octapeptide Derived From Serine Acetyl
Transferase Of Leishmania Donovani
pdb|3SPX|A Chain A, Crystal Structure Of O-Acetyl Serine Sulfhydrylase From
Leishmania Donovani
Length = 334
Score = 196 bits (498), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 96/224 (42%), Positives = 135/224 (60%)
Query: 1 MPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEI 60
MP + S+ERR +LR GAEV L A+G +G V ++I+ PN + QF N I
Sbjct: 102 MPESMSLERRCLLRIFGAEVILTPAALGMKGAVAMAKKIVAANPNAVLADQFATKYNALI 161
Query: 61 HYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEPSESAVLNGG 120
H ETTGPEIW + VD F R LK+ + ++ +EP+ES VL+GG
Sbjct: 162 HEETTGPEIWEQTNHNVDCFIAGVGTGGTLTGVARALKKMGSHARIVAVEPTESPVLSGG 221
Query: 121 QPGKHLIQGIGAGVIPPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLVGISSGXXXXX 180
+PG H IQGIG G +P VLD +++DEV+ V+ ++AIET+ L +G+ G S G
Sbjct: 222 KPGPHKIQGIGPGFVPDVLDRSLIDEVLCVAGDDAIETALKLTRSDGVFCGFSGGANVYA 281
Query: 181 XIRVAKRPENAGKLIVVIFPSAGERYLSTALFESIRHEVENMPI 224
+++A+RPE GK IV + PS GERYLST L+ S+R EV ++P+
Sbjct: 282 ALKIAERPEMEGKTIVTVIPSFGERYLSTTLYRSVRDEVSSLPV 325
>pdb|1D6S|A Chain A, Crystal Structure Of The K41a Mutant Of O-Acetylserine
Sulfhydrylase Complexed In External Aldimine Linkage
With Methionine
pdb|1D6S|B Chain B, Crystal Structure Of The K41a Mutant Of O-Acetylserine
Sulfhydrylase Complexed In External Aldimine Linkage
With Methionine
Length = 322
Score = 184 bits (466), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 101/229 (44%), Positives = 141/229 (61%), Gaps = 9/229 (3%)
Query: 1 MPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYIL-GQFENPANPE 59
MP T SIERR +L+ALGA + L + A G +G ++K EEI+ P Y+L QF NPANPE
Sbjct: 91 MPETMSIERRKLLKALGANLVLTEGAKGMKGAIQKAEEIVASDPQKYLLLQQFSNPANPE 150
Query: 60 IHYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLK--EKNPNIKVYGIEPSESAVL 117
IH +TTGPEIW D+ G+VD F R++K + ++ +EP++S V+
Sbjct: 151 IHEKTTGPEIWEDTDGQVDVFISGVGTGGTLTGVTRYIKGTKGKTDLITVAVEPTDSPVI 210
Query: 118 NGG------QPGKHLIQGIGAGVIPPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLVG 171
+PG H IQGIGAG IP LD+ ++D+V+ +++EEAI T++ L +EG+L G
Sbjct: 211 AQALAGEEIKPGPHKIQGIGAGFIPGNLDLKLIDKVVGITNEEAISTARRLMEEEGILAG 270
Query: 172 ISSGXXXXXXIRVAKRPENAGKLIVVIFPSAGERYLSTALFESIRHEVE 220
ISSG +++ + K IVVI PS+GERYLSTALF + E E
Sbjct: 271 ISSGAAVAAALKLQEDESFTNKNIVVILPSSGERYLSTALFADLFTEKE 319
>pdb|1OAS|A Chain A, O-Acetylserine Sulfhydrylase From Salmonella Typhimurium
pdb|1OAS|B Chain B, O-Acetylserine Sulfhydrylase From Salmonella Typhimurium
pdb|1FCJ|A Chain A, Crystal Structure Of Oass Complexed With Chloride And
Sulfate
pdb|1FCJ|B Chain B, Crystal Structure Of Oass Complexed With Chloride And
Sulfate
pdb|1FCJ|C Chain C, Crystal Structure Of Oass Complexed With Chloride And
Sulfate
pdb|1FCJ|D Chain D, Crystal Structure Of Oass Complexed With Chloride And
Sulfate
Length = 322
Score = 183 bits (465), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 101/229 (44%), Positives = 141/229 (61%), Gaps = 9/229 (3%)
Query: 1 MPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYIL-GQFENPANPE 59
MP T SIERR +L+ALGA + L + A G +G ++K EEI+ P Y+L QF NPANPE
Sbjct: 91 MPETMSIERRKLLKALGANLVLTEGAKGMKGAIQKAEEIVASDPQKYLLLQQFSNPANPE 150
Query: 60 IHYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLK--EKNPNIKVYGIEPSESAVL 117
IH +TTGPEIW D+ G+VD F R++K + ++ +EP++S V+
Sbjct: 151 IHEKTTGPEIWEDTDGQVDVFISGVGTGGTLTGVTRYIKGTKGKTDLITVAVEPTDSPVI 210
Query: 118 NGG------QPGKHLIQGIGAGVIPPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLVG 171
+PG H IQGIGAG IP LD+ ++D+V+ +++EEAI T++ L +EG+L G
Sbjct: 211 AQALAGEEIKPGPHKIQGIGAGFIPGNLDLKLIDKVVGITNEEAISTARRLMEEEGILAG 270
Query: 172 ISSGXXXXXXIRVAKRPENAGKLIVVIFPSAGERYLSTALFESIRHEVE 220
ISSG +++ + K IVVI PS+GERYLSTALF + E E
Sbjct: 271 ISSGAAVAAALKLQEDESFTNKNIVVILPSSGERYLSTALFADLFTEKE 319
>pdb|1Y7L|A Chain A, O-Acetylserine Sulfhydrylase Complex
pdb|3IQG|X Chain X, Structure Of O-Acetylserine Sulfhydrylase In Complex With
Peptide Mnwni
pdb|3IQH|X Chain X, Structure Of O-Acetylserine Sulfhydrylase In Complex With
Peptide Mnydi
pdb|3IQI|X Chain X, Structure Of O-Acetylserine Sulfhydrylase In Complex With
Peptide Mneni
Length = 316
Score = 175 bits (443), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/223 (47%), Positives = 136/223 (60%), Gaps = 8/223 (3%)
Query: 1 MPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYI-LGQFENPANPE 59
MP T S+ER+ +L LG + L + A G +G + K EEI+ P+ Y+ L QFENPANP+
Sbjct: 92 MPETMSLERKRLLCGLGVNLVLTEGAKGMKGAIAKAEEIVASDPSRYVMLKQFENPANPQ 151
Query: 60 IHYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLK-EKNPNIKVYGIEPSESAVLN 118
IH ETTGPEIW D+ GKVD R +K + I +EP ES V++
Sbjct: 152 IHRETTGPEIWKDTDGKVDVVVAGVGTGGSITGISRAIKLDFGKQITSVAVEPVESPVIS 211
Query: 119 GG------QPGKHLIQGIGAGVIPPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLVGI 172
+PG H IQGIGAG IP LD++++D V TV S+ A+ T++ L +EG+L GI
Sbjct: 212 QTLAGEEVKPGPHKIQGIGAGFIPKNLDLSIIDRVETVDSDTALATARRLMAEEGILAGI 271
Query: 173 SSGXXXXXXIRVAKRPENAGKLIVVIFPSAGERYLSTALFESI 215
SSG R+AK PE A KLIVVI PSA ERYLSTALFE I
Sbjct: 272 SSGAAVAAADRLAKLPEFADKLIVVILPSASERYLSTALFEGI 314
>pdb|2EGU|A Chain A, Crystal Structure Of O-Acetylserine Sulfhydrase From
Geobacillus Kaustophilus Hta426
Length = 308
Score = 169 bits (427), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 100/214 (46%), Positives = 135/214 (63%), Gaps = 4/214 (1%)
Query: 1 MPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYIL-GQFENPANPE 59
MP T S+ERR +LRA GAE+ L A G G + K EE++ +GY + QF+N ANPE
Sbjct: 95 MPDTMSLERRNLLRAYGAELVLTPGAQGMRGAIAKAEELVRE--HGYFMPQQFKNEANPE 152
Query: 60 IHYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEPSESAVLNG 119
IH TTG EI G ++DAF + L+E PNIK+Y +EP++S VL+G
Sbjct: 153 IHRLTTGKEIVEQMGDQLDAFVAGVGTGGTITGAGKVLREAYPNIKIYAVEPADSPVLSG 212
Query: 120 GQPGKHLIQGIGAGVIPPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLVGISSGXXXX 179
G+PG H IQGIGAG +P +LD ++ D VITV++EEA ++ A +EG+L GISSG
Sbjct: 213 GKPGPHKIQGIGAGFVPDILDTSIYDGVITVTTEEAFAAARRAAREEGILGGISSGAAIH 272
Query: 180 XXIRVAKRPENAGKLIVVIFPSAGERYLSTALFE 213
++VAK GK ++ I PS GERYLST L++
Sbjct: 273 AALKVAKE-LGKGKKVLAIIPSNGERYLSTPLYQ 305
>pdb|3FCA|A Chain A, Genetic Incorporation Of A Metal-Ion Chelating Amino Acid
Into Proteins As Biophysical Probe
pdb|3FCA|B Chain B, Genetic Incorporation Of A Metal-Ion Chelating Amino Acid
Into Proteins As Biophysical Probe
Length = 291
Score = 165 bits (417), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/209 (45%), Positives = 128/209 (61%), Gaps = 3/209 (1%)
Query: 1 MPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEI 60
MP T S+ERR +L+ LGAE+ L +G +G V+K EI +R ++L QFENP N
Sbjct: 83 MPETMSVERRKVLKMLGAELVLTPGELGMKGAVEKALEI-SRETGAHMLNQFENPYNVYS 141
Query: 61 HYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPN-IKVYGIEPSESAVLNG 119
H TTGPEI ++DAF R LK N +K+ +EP++S VL+G
Sbjct: 142 HQFTTGPEILKQMDYQIDAFVAGVGTGGTISGVGRVLKGFFGNGVKIVAVEPAKSPVLSG 201
Query: 120 GQPGKHLIQGIGAGVIPPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLVGISSGXXXX 179
GQPGKH IQGIGAG +P +LD +++DEVITV EEA E ++ LA KEGLLVGISSG
Sbjct: 202 GQPGKHAIQGIGAGFVPKILDRSVIDEVITVEDEEAYEMARYLAKKEGLLVGISSGANVA 261
Query: 180 XXIRVAKRPENAGKLIVVIFPSAGERYLS 208
++VA++ + +V + P ERYLS
Sbjct: 262 AALKVAQKLGPDAR-VVTVAPDHAERYLS 289
>pdb|1O58|A Chain A, Crystal Structure Of O-Acetylserine Sulfhydrylase (Tm0665)
From Thermotoga Maritima At 1.80 A Resolution
pdb|1O58|B Chain B, Crystal Structure Of O-Acetylserine Sulfhydrylase (Tm0665)
From Thermotoga Maritima At 1.80 A Resolution
pdb|1O58|C Chain C, Crystal Structure Of O-Acetylserine Sulfhydrylase (Tm0665)
From Thermotoga Maritima At 1.80 A Resolution
pdb|1O58|D Chain D, Crystal Structure Of O-Acetylserine Sulfhydrylase (Tm0665)
From Thermotoga Maritima At 1.80 A Resolution
Length = 303
Score = 165 bits (417), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/209 (45%), Positives = 128/209 (61%), Gaps = 3/209 (1%)
Query: 1 MPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEI 60
MP T S+ERR +L+ LGAE+ L +G +G V+K EI +R ++L QFENP N
Sbjct: 95 MPETMSVERRKVLKMLGAELVLTPGELGMKGAVEKALEI-SRETGAHMLNQFENPYNVYS 153
Query: 61 HYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPN-IKVYGIEPSESAVLNG 119
H TTGPEI ++DAF R LK N +K+ +EP++S VL+G
Sbjct: 154 HQFTTGPEILKQMDYQIDAFVAGVGTGGTISGVGRVLKGFFGNGVKIVAVEPAKSPVLSG 213
Query: 120 GQPGKHLIQGIGAGVIPPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLVGISSGXXXX 179
GQPGKH IQGIGAG +P +LD +++DEVITV EEA E ++ LA KEGLLVGISSG
Sbjct: 214 GQPGKHAIQGIGAGFVPKILDRSVIDEVITVEDEEAYEMARYLAKKEGLLVGISSGANVA 273
Query: 180 XXIRVAKRPENAGKLIVVIFPSAGERYLS 208
++VA++ + +V + P ERYLS
Sbjct: 274 AALKVAQKLGPDAR-VVTVAPDHAERYLS 301
>pdb|1VE1|A Chain A, Crystal Structure Of T.Th. Hb8 O-Acetylserine
Sulfhydrylase
pdb|2ECO|A Chain A, Crystal Structure Of T.Th. Hb8 O-Acetylserine
Sulfhydrylase Complexed With 4-Methylvalerate
pdb|2ECQ|A Chain A, Crystal Structure Of T.Th. Hb8 O-Acetylserine
Sulfhydrylase Complexed With 3-Hydroxylactate
pdb|2EFY|A Chain A, Crystal Structure Of T.Th. Hb8 O-Acetylserine
Sulfhydrylase Complexed With 4-Acetylbutyric Acid
pdb|2EFY|B Chain B, Crystal Structure Of T.Th. Hb8 O-Acetylserine
Sulfhydrylase Complexed With 4-Acetylbutyric Acid
Length = 304
Score = 150 bits (379), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 88/216 (40%), Positives = 126/216 (58%), Gaps = 10/216 (4%)
Query: 1 MPSTYSIERRIILRALGAEVYLADPA----VGFEGFVKKGEEILNRTPNGYILGQFENPA 56
MP+ S ER+ +L+A GAE+ L DP E ++ EE+ P+ QF+NPA
Sbjct: 92 MPAQMSEERKRVLKAFGAELVLTDPERRMLAAREEALRLKEELGAFMPD-----QFKNPA 146
Query: 57 NPEIHYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEPSESAV 116
N HYETTGPE++ G++DAF R+LKE+ P++KV +EP+ S V
Sbjct: 147 NVRAHYETTGPELYEALEGRIDAFVYGSGTGGTITGVGRYLKERIPHVKVIAVEPARSNV 206
Query: 117 LNGGQPGKHLIQGIGAGVIPPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLVGISSGX 176
L+GG+ G+H QG+G G IP LD+++LD VI V E+A ++ LA +EGL +G+SSG
Sbjct: 207 LSGGKMGQHGFQGMGPGFIPENLDLSLLDGVIQVWEEDAFPLARRLAREEGLFLGMSSGG 266
Query: 177 XXXXXIRVAKRPENAGKLIVVIFPSAGERYLSTALF 212
++VA R GK + I P G +YLST L+
Sbjct: 267 IVWAALQVA-RELGPGKRVACISPDGGWKYLSTPLY 301
>pdb|3BM5|A Chain A, Crystal Structure Of O-Acetyl-Serine Sulfhydrylase From
Entamoeba Histolytica In Complex With Cysteine
pdb|3BM5|B Chain B, Crystal Structure Of O-Acetyl-Serine Sulfhydrylase From
Entamoeba Histolytica In Complex With Cysteine
Length = 338
Score = 144 bits (363), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 125/214 (58%), Gaps = 2/214 (0%)
Query: 1 MPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILG-QFENPANPE 59
MPST S+ER++I++A GAE+ L + G G +++ +++ P Y + QF NP N
Sbjct: 107 MPSTMSVERQMIMKAFGAELILTEGKKGMPGAIEEVNKMIKENPGKYFVANQFGNPDNTA 166
Query: 60 IHYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEPSESAVLNG 119
H+ T EIW D+ G+VD LKEK IK+ +EP ESAVL G
Sbjct: 167 AHHYTAN-EIWEDTDGEVDIVVSAVGTSGTVIGVAEKLKEKKKGIKIIAVEPEESAVLEG 225
Query: 120 GQPGKHLIQGIGAGVIPPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLVGISSGXXXX 179
G H IQGIGAG IP + +DE+I + +++A + ++ + +G++ G+SSG
Sbjct: 226 KAKGPHGIQGIGAGFIPDIYKKEFVDEIIPIKTQDAWKMARAVVKYDGIMCGMSSGAAIL 285
Query: 180 XXIRVAKRPENAGKLIVVIFPSAGERYLSTALFE 213
++ A++PEN GK IV+I PS GERYLST L++
Sbjct: 286 AGLKEAEKPENEGKTIVIIVPSCGERYLSTDLYK 319
>pdb|2PQM|A Chain A, Crystal Structure Of Cysteine Synthase (Oass) From
Entamoeba Histolytica At 1.86 A Resolution
pdb|2PQM|B Chain B, Crystal Structure Of Cysteine Synthase (Oass) From
Entamoeba Histolytica At 1.86 A Resolution
Length = 343
Score = 144 bits (363), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 125/214 (58%), Gaps = 2/214 (0%)
Query: 1 MPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILG-QFENPANPE 59
MPST S+ER++I++A GAE+ L + G G +++ +++ P Y + QF NP N
Sbjct: 108 MPSTMSVERQMIMKAFGAELILTEGKKGMPGAIEEVNKMIKENPGKYFVANQFGNPDNTA 167
Query: 60 IHYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEPSESAVLNG 119
H+ T EIW D+ G+VD LKEK IK+ +EP ESAVL G
Sbjct: 168 AHHYTAN-EIWEDTDGEVDIVVSAVGTSGTVIGVAEKLKEKKKGIKIIAVEPEESAVLEG 226
Query: 120 GQPGKHLIQGIGAGVIPPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLVGISSGXXXX 179
G H IQGIGAG IP + +DE+I + +++A + ++ + +G++ G+SSG
Sbjct: 227 KAKGPHGIQGIGAGFIPDIYKKEFVDEIIPIKTQDAWKMARAVVKYDGIMCGMSSGAAIL 286
Query: 180 XXIRVAKRPENAGKLIVVIFPSAGERYLSTALFE 213
++ A++PEN GK IV+I PS GERYLST L++
Sbjct: 287 AGLKEAEKPENEGKTIVIIVPSCGERYLSTDLYK 320
>pdb|2BHS|A Chain A, Crystal Structure Of Cysteine Synthase B
pdb|2BHS|B Chain B, Crystal Structure Of Cysteine Synthase B
pdb|2BHS|C Chain C, Crystal Structure Of Cysteine Synthase B
pdb|2BHS|D Chain D, Crystal Structure Of Cysteine Synthase B
Length = 303
Score = 133 bits (334), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 111/212 (52%), Gaps = 10/212 (4%)
Query: 1 MPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEI 60
MP S ERR +RA GAE+ L G EG E+ NR G +L QF NP NP
Sbjct: 91 MPDNMSQERRAAMRAYGAELILVTKEQGMEGARDLALEMANRG-EGKLLDQFNNPDNPYA 149
Query: 61 HYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEPSESAVLNGG 120
HY TTGPEIW +GG++ F RF++E++ + + G++P E + + G
Sbjct: 150 HYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQPEEGSSIPG- 208
Query: 121 QPGKHLIQGIGAGVIPPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLVGISSGXXXXX 180
I+ +P + + +++DEV+ + +A T + LA++EG+ G+SSG
Sbjct: 209 ------IRRWPTEYLPGIFNASLVDEVLDIHQRDAENTMRELAVREGIFCGVSSGGAVAG 262
Query: 181 XIRVAKRPENAGKLIVVIFPSAGERYLSTALF 212
+RVAK N ++V I G+RYLST +F
Sbjct: 263 ALRVAK--ANPDAVVVAIICDRGDRYLSTGVF 292
>pdb|2BHT|A Chain A, Crystal Structure Of O-Acetylserine Sulfhydrylase B
pdb|2BHT|B Chain B, Crystal Structure Of O-Acetylserine Sulfhydrylase B
pdb|2BHT|C Chain C, Crystal Structure Of O-Acetylserine Sulfhydrylase B
pdb|2BHT|D Chain D, Crystal Structure Of O-Acetylserine Sulfhydrylase B
Length = 303
Score = 131 bits (330), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 111/212 (52%), Gaps = 10/212 (4%)
Query: 1 MPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEI 60
MP S ERR +RA GAE+ L G EG E+ NR G +L QF NP NP+
Sbjct: 91 MPDNMSQERRAAMRAYGAELILVTKEQGMEGARDLALEMANRG-EGKLLDQFNNPDNPKA 149
Query: 61 HYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEPSESAVLNGG 120
HY TTGPEIW +GG++ F F++E++ + + G++P E + + G
Sbjct: 150 HYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVSEFMREQSKPVTIVGLQPEEGSSIPG- 208
Query: 121 QPGKHLIQGIGAGVIPPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLVGISSGXXXXX 180
I+ +P + + +++DEV+ + +A T + LA++EG+ G+SSG
Sbjct: 209 ------IRRWPTEYLPGIFNASLVDEVLDIHQRDAENTMRELAVREGIFCGVSSGGAVAG 262
Query: 181 XIRVAKRPENAGKLIVVIFPSAGERYLSTALF 212
+RVAK N ++V I G+RYLST +F
Sbjct: 263 ALRVAK--ANPDAVVVAIICDRGDRYLSTGVF 292
>pdb|2V03|A Chain A, High Resolution Structure And Catalysis Of An O-
Acetylserine Sulfhydrylase
Length = 303
Score = 130 bits (328), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 110/212 (51%), Gaps = 10/212 (4%)
Query: 1 MPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEI 60
MP S ERR +RA GAE+ L G EG E+ NR G +L QF NP NP
Sbjct: 91 MPDNMSQERRAAMRAYGAELILVTKEQGMEGARDLALEMANRG-EGKLLDQFNNPDNPYA 149
Query: 61 HYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEPSESAVLNGG 120
HY TTGPEIW +GG++ F RF++E++ + + G++P E + + G
Sbjct: 150 HYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQPEEGSSIPG- 208
Query: 121 QPGKHLIQGIGAGVIPPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLVGISSGXXXXX 180
I+ +P + + +++DEV+ + +A T + LA++EG+ G+SSG
Sbjct: 209 ------IRRWPTEYLPGIFNASLVDEVLDIHQRDAENTMRELAVREGIFCGVSSGGAVAG 262
Query: 181 XIRVAKRPENAGKLIVVIFPSAGERYLSTALF 212
+RVA N ++V I G+RYLST +F
Sbjct: 263 ALRVAA--ANPDAVVVAIICDRGDRYLSTGVF 292
>pdb|2JC3|A Chain A, Structure Of O-acetylserine Sulfhydrylase B From
Salmonella Typhimurium
pdb|2JC3|B Chain B, Structure Of O-acetylserine Sulfhydrylase B From
Salmonella Typhimurium
pdb|2JC3|C Chain C, Structure Of O-acetylserine Sulfhydrylase B From
Salmonella Typhimurium
pdb|2JC3|D Chain D, Structure Of O-acetylserine Sulfhydrylase B From
Salmonella Typhimurium
pdb|2JC3|E Chain E, Structure Of O-acetylserine Sulfhydrylase B From
Salmonella Typhimurium
pdb|2JC3|F Chain F, Structure Of O-acetylserine Sulfhydrylase B From
Salmonella Typhimurium
pdb|2JC3|G Chain G, Structure Of O-acetylserine Sulfhydrylase B From
Salmonella Typhimurium
pdb|2JC3|H Chain H, Structure Of O-acetylserine Sulfhydrylase B From
Salmonella Typhimurium
Length = 303
Score = 126 bits (317), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 109/212 (51%), Gaps = 10/212 (4%)
Query: 1 MPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEI 60
MP S ERR +RA GAE+ L G EG + ++ G +L QF NP NP
Sbjct: 91 MPDNMSQERRAAMRAYGAELILVTKEQGMEG-ARDLALAMSERGEGKLLDQFNNPDNPYA 149
Query: 61 HYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEPSESAVLNGG 120
HY TTGPEIW + G++ F RFL+E+ + + G++P E + + G
Sbjct: 150 HYTTTGPEIWRQTSGRITHFVSSMGTTGTITGVSRFLREQEKPVTIVGLQPEEGSSIPG- 208
Query: 121 QPGKHLIQGIGAGVIPPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLVGISSGXXXXX 180
I+ A +P + + +++DEV+ + +A T + LA++EG+ G+SSG
Sbjct: 209 ------IRRWPAEYMPGIFNASLVDEVLDIHQNDAENTMRELAVREGIFCGVSSGGAVAG 262
Query: 181 XIRVAKRPENAGKLIVVIFPSAGERYLSTALF 212
+RVA+ G ++V I G+RYLST +F
Sbjct: 263 ALRVAR--ATPGAIVVAIICDRGDRYLSTGVF 292
>pdb|1M54|A Chain A, Cystathionine-Beta Synthase: Reduced Vicinal Thiols
pdb|1M54|B Chain B, Cystathionine-Beta Synthase: Reduced Vicinal Thiols
pdb|1M54|C Chain C, Cystathionine-Beta Synthase: Reduced Vicinal Thiols
pdb|1M54|D Chain D, Cystathionine-Beta Synthase: Reduced Vicinal Thiols
pdb|1M54|E Chain E, Cystathionine-Beta Synthase: Reduced Vicinal Thiols
pdb|1M54|F Chain F, Cystathionine-Beta Synthase: Reduced Vicinal Thiols
Length = 363
Score = 113 bits (283), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 106/219 (48%), Gaps = 9/219 (4%)
Query: 1 MPSTYSIERRIILRALGAEVYLADPAVGF---EGFVKKGEEILNRTPNGYILGQFENPAN 57
MP S E+ +LRALGAE+ F E V + N PN +IL Q+ N +N
Sbjct: 126 MPEKMSSEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRLKNEIPNSHILDQYRNASN 185
Query: 58 PEIHYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEP-----S 112
P HY+TT EI GK+D R LKEK P ++ G++P +
Sbjct: 186 PLAHYDTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDPEGSILA 245
Query: 113 ESAVLNGGQPGKHLIQGIGAGVIPPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLVGI 172
E LN + + ++GIG IP VLD ++D+ + EEA +++L +EGLL G
Sbjct: 246 EPEELNQTEQTTYEVEGIGYDFIPTVLDRTVVDKWFKSNDEEAFTFARMLIAQEGLLCGG 305
Query: 173 SSGXXXXXXIRVAKRPENAGKLIVVIFPSAGERYLSTAL 211
S+G ++ A+ + G+ VVI P + Y++ L
Sbjct: 306 SAGSTVAVAVKAAQELQE-GQRCVVILPDSVRNYMTKFL 343
>pdb|1JBQ|A Chain A, Structure Of Human Cystathionine Beta-Synthase: A Unique
Pyridoxal 5'- Phosphate Dependent Hemeprotein
pdb|1JBQ|B Chain B, Structure Of Human Cystathionine Beta-Synthase: A Unique
Pyridoxal 5'- Phosphate Dependent Hemeprotein
pdb|1JBQ|C Chain C, Structure Of Human Cystathionine Beta-Synthase: A Unique
Pyridoxal 5'- Phosphate Dependent Hemeprotein
pdb|1JBQ|D Chain D, Structure Of Human Cystathionine Beta-Synthase: A Unique
Pyridoxal 5'- Phosphate Dependent Hemeprotein
pdb|1JBQ|E Chain E, Structure Of Human Cystathionine Beta-Synthase: A Unique
Pyridoxal 5'- Phosphate Dependent Hemeprotein
pdb|1JBQ|F Chain F, Structure Of Human Cystathionine Beta-Synthase: A Unique
Pyridoxal 5'- Phosphate Dependent Hemeprotein
Length = 435
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 107/221 (48%), Gaps = 9/221 (4%)
Query: 1 MPSTYSIERRIILRALGAEVYLADPAVGF---EGFVKKGEEILNRTPNGYILGQFENPAN 57
MP S E+ +LRALGAE+ F E V + N PN +IL Q+ N +N
Sbjct: 191 MPEKMSSEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRLKNEIPNSHILDQYRNASN 250
Query: 58 PEIHYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEP-----S 112
P HY+TT EI GK+D R LKEK P ++ G++P +
Sbjct: 251 PLAHYDTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDPEGSILA 310
Query: 113 ESAVLNGGQPGKHLIQGIGAGVIPPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLVGI 172
E LN + + ++GIG IP VLD ++D+ + EEA +++L +EGLL G
Sbjct: 311 EPEELNQTEQTTYEVEGIGYDFIPTVLDRTVVDKWFKSNDEEAFTFARMLIAQEGLLCGG 370
Query: 173 SSGXXXXXXIRVAKRPENAGKLIVVIFPSAGERYLSTALFE 213
S+G ++ A+ + G+ VVI P + Y++ L +
Sbjct: 371 SAGSTVAVAVKAAQELQE-GQRCVVILPDSVRNYMTKFLSD 410
>pdb|3DWG|A Chain A, Crystal Structure Of A Sulfur Carrier Protein Complex
Found In The Cysteine Biosynthetic Pathway Of
Mycobacterium Tuberculosis
pdb|3DWG|B Chain B, Crystal Structure Of A Sulfur Carrier Protein Complex
Found In The Cysteine Biosynthetic Pathway Of
Mycobacterium Tuberculosis
Length = 325
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 10/214 (4%)
Query: 1 MPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEI 60
MP S+ERR +L GA++ + G V +E+ P+ +L Q+ NPAN +
Sbjct: 103 MPENTSVERRQLLELYGAQIIFSAAEGGSNTAVATAKELAATNPSWVMLYQYGNPANTDS 162
Query: 61 HYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEPSESAVLNGG 120
HY TGPE+ D ++ F RFL+E N+K+ EP
Sbjct: 163 HYCGTGPELLADL-PEITHFVAGLGTTGTLMGTGRFLREHVANVKIVAAEPRYG------ 215
Query: 121 QPGKHLIQGIGAGVIPPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLVGISSGXXXXX 180
G + ++ + G +P + D +L +V + +A+ ++ L EG+ GIS+G
Sbjct: 216 -EGVYALRNMDEGFVPELYDPEILTARYSVGAVDAVRRTRELVHTEGIFAGISTGAVLHA 274
Query: 181 XIRVAKRPENAGKL--IVVIFPSAGERYLSTALF 212
+ V AG+ I ++ AG +YLST +
Sbjct: 275 ALGVGAGALAAGERADIALVVADAGWKYLSTGAY 308
>pdb|3DKI|A Chain A, 2.1 A X-Ray Structure Of Cysm (Rv1336) From Mycobacterium
Tuberculosis An O-Phosphoserine Dependent Cysteine
Synthase
pdb|3DKI|B Chain B, 2.1 A X-Ray Structure Of Cysm (Rv1336) From Mycobacterium
Tuberculosis An O-Phosphoserine Dependent Cysteine
Synthase
pdb|3FGP|A Chain A, 2.05 A Crystal Structure Of Cysm From Mycobacterium
Tuberculosis - Open And Closed Conformations
pdb|3FGP|B Chain B, 2.05 A Crystal Structure Of Cysm From Mycobacterium
Tuberculosis - Open And Closed Conformations
Length = 326
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 10/214 (4%)
Query: 1 MPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEI 60
MP S+ERR +L GA++ + G V +E+ P+ +L Q+ NPAN +
Sbjct: 104 MPENTSVERRQLLELYGAQIIFSAAEGGSNTAVATAKELAATNPSWVMLYQYGNPANTDS 163
Query: 61 HYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEPSESAVLNGG 120
HY TGPE+ D ++ F RFL+E N+K+ EP
Sbjct: 164 HYCGTGPELLADL-PEITHFVAGLGTTGTLMGTGRFLREHVANVKIVAAEPRYG------ 216
Query: 121 QPGKHLIQGIGAGVIPPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLVGISSGXXXXX 180
G + ++ + G +P + D +L +V + +A+ ++ L EG+ GIS+G
Sbjct: 217 -EGVYALRNMDEGFVPELYDPEILTARYSVGAVDAVRRTRELVHTEGIFAGISTGAVLHA 275
Query: 181 XIRVAKRPENAGKL--IVVIFPSAGERYLSTALF 212
+ V AG+ I ++ AG +YLST +
Sbjct: 276 ALGVGAGALAAGERADIALVVADAGWKYLSTGAY 309
>pdb|3DWI|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cysm, The
Cysteine Synthase B
pdb|3DWI|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Cysm, The
Cysteine Synthase B
Length = 323
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 10/214 (4%)
Query: 1 MPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEI 60
MP S+ERR +L GA++ + G V +E+ P+ +L Q+ NPAN +
Sbjct: 101 MPENTSVERRQLLELYGAQIIFSAAEGGSNTAVATAKELAATNPSWVMLYQYGNPANTDS 160
Query: 61 HYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEPSESAVLNGG 120
HY TGPE+ D ++ F RFL+E N+ + EP
Sbjct: 161 HYCGTGPELLADL-PEITHFVAGLGTTGTLMGTGRFLREHVANVAIVAAEPRYG------ 213
Query: 121 QPGKHLIQGIGAGVIPPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLVGISSGXXXXX 180
G + ++ + G +P + D +L +V + +A+ ++ L EG+ GIS+G
Sbjct: 214 -EGVYALRNMDEGFVPELYDPEILTARYSVGAVDAVRRTRELVHTEGIFAGISTGAVLHA 272
Query: 181 XIRVAKRPENAGKL--IVVIFPSAGERYLSTALF 212
+ V AG+ I ++ AG +YLST +
Sbjct: 273 ALGVGAGALAAGERADIALVVADAGWKYLSTGAY 306
>pdb|3PC2|A Chain A, Full Length Structure Of Cystathionine Beta-Synthase From
Drosophila
pdb|3PC3|A Chain A, Full Length Structure Of Cystathionine Beta-Synthase From
Drosophila In Complex With Aminoacrylate
pdb|3PC4|A Chain A, Full Length Structure Of Cystathionine Beta-Synthase From
Drosophila In Complex With Serine
Length = 527
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 95/216 (43%), Gaps = 9/216 (4%)
Query: 1 MPSTYSIERRIILRALGAEVYLADPAVGF---EGFVKKGEEILNRTPNGYILGQFENPAN 57
MP S E+ LR LGA++ + EG + +++ TPN +L Q+ N N
Sbjct: 143 MPEKMSNEKVSALRTLGAKIIRTPTEAAYDSPEGLIYVAQQLQRETPNSIVLDQYRNAGN 202
Query: 58 PEIHYETTGPEIWNDSGGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEP-----S 112
P HY+ T EI KVD R +KE+ P+ ++ G++P +
Sbjct: 203 PLAHYDGTAAEILWQLDNKVDMIVVSAGTAGTISGIGRKIKEQVPSCQIVGVDPYGSILA 262
Query: 113 ESAVLNGGQPGKHLIQGIGAGVIPPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLVGI 172
A LN + ++GIG P V D ++D + + S+ L +EGLL G
Sbjct: 263 RPAELNKTDVQFYEVEGIGYDFPPTVFDDTVVDVWTKIGDSDCFPMSRRLNAEEGLLCGG 322
Query: 173 SSGXXXXXXIRVAKRPENAGKLIVVIFPSAGERYLS 208
SSG + A++ + G+ VVI P Y++
Sbjct: 323 SSGGAMHAALEHARKLKK-GQRCVVILPDGIRNYMT 357
>pdb|1WKV|A Chain A, Crystal Structure Of O-Phosphoserine Sulfhydrylase
pdb|1WKV|B Chain B, Crystal Structure Of O-Phosphoserine Sulfhydrylase
pdb|3VSA|A Chain A, Crystal Structure Of O-Phosphoserine Sulfhydrylase Without
Acetate
pdb|3VSA|B Chain B, Crystal Structure Of O-Phosphoserine Sulfhydrylase Without
Acetate
Length = 389
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPN-GYI-LGQFENPANPEIHYETTGP 67
+++ R LGA+V + DP V ++ + N G++ + QF N AN E H T
Sbjct: 184 KLLPRLLGAQV-IVDPEA--PSTVHLLPRVMKDSKNEGFVHVNQFYNDANFEAHMRGTAR 240
Query: 68 EIWNDS---GGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEPSESAVLNGGQPGK 124
EI+ S G + +L+ +P+I+ ++P++ + G
Sbjct: 241 EIFVQSRRGGLALRGVAGSLGTSGHMSAAAFYLQSVDPSIRAVLVQPAQGDSIPG----- 295
Query: 125 HLIQGIGAGVIPPVLDVAMLDEVIT---VSSEEAIETSKLLALKEGLLVGISSGXXXXXX 181
I+ + G+ L + MLD T V+ EEA+E +A +GL++G S G
Sbjct: 296 --IRRVETGM----LWINMLDISYTLAEVTLEEAMEAVVEVARSDGLVIGPSGGAAVKAL 349
Query: 182 IRVAKRPENAGKLIVVIFPSAGERYLS 208
+ A + VV+ P G +YLS
Sbjct: 350 AKKAAEGDLEPGDYVVVVPDTGFKYLS 376
>pdb|3VSC|A Chain A, Crystal Structure Of The K127a Mutant Of O-Phosphoserine
Sulfhydrylase Complexed With External Schiff Base Of
Pyridoxal 5'-Phosphate With O- Phospho-L-Serine
pdb|3VSC|B Chain B, Crystal Structure Of The K127a Mutant Of O-Phosphoserine
Sulfhydrylase Complexed With External Schiff Base Of
Pyridoxal 5'-Phosphate With O- Phospho-L-Serine
pdb|3VSD|A Chain A, Crystal Structure Of The K127a Mutant Of O-Phosphoserine
Sulfhydrylase Complexed With External Schiff Base Of
Pyridoxal 5'-Phosphate With O- Acetyl-L-Serine
pdb|3VSD|B Chain B, Crystal Structure Of The K127a Mutant Of O-Phosphoserine
Sulfhydrylase Complexed With External Schiff Base Of
Pyridoxal 5'-Phosphate With O- Acetyl-L-Serine
Length = 389
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 10 RIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPN-GYI-LGQFENPANPEIHYETTGP 67
+++ R LGA+V + DP V ++ + N G++ + QF N AN E H T
Sbjct: 184 KLLPRLLGAQV-IVDPEA--PSTVHLLPRVMKDSKNEGFVHVNQFYNDANFEAHMRGTAR 240
Query: 68 EIWNDS---GGKVDAFXXXXXXXXXXXXXXRFLKEKNPNIKVYGIEPSESAVLNGGQPGK 124
EI+ S G + +L+ +P+I+ ++P++ + G
Sbjct: 241 EIFVQSRRGGLALRGVAGSLGTSGHMSAAAFYLQSVDPSIRAVLVQPAQGDSIPG----- 295
Query: 125 HLIQGIGAGVIPPVLDVAMLDEVIT---VSSEEAIETSKLLALKEGLLVGISSGXXXXXX 181
I+ + G+ L + MLD T V+ EEA+E +A +GL++G S G
Sbjct: 296 --IRRVETGM----LWINMLDISYTLAEVTLEEAMEAVVEVARSDGLVIGPSGGAAVKAL 349
Query: 182 IRVAKRPENAGKLIVVIFPSAGERYLS 208
+ A + VV+ P G +YLS
Sbjct: 350 AKKAAEGDLEPGDYVVVVPDTGFKYLS 376
>pdb|2DH5|A Chain A, Crystal Structure Of E. Coli Holo-Trpb
pdb|2DH6|A Chain A, Crystal Structure Of E. Coli Apo-trpb
Length = 397
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 57/138 (41%), Gaps = 31/138 (22%)
Query: 103 NIKVYGIEPSESAVLNG--GQPGKHLIQGIGAGVIPPVLDV------------AMLD--- 145
N+ + G+EP + G G P KH GI G+ P++ A LD
Sbjct: 249 NVGLIGVEPGGHGIETGEHGAPLKHGRVGIYFGMKAPMMQTEDGQIEESYSISAGLDFPS 308
Query: 146 --------------EVITVSSEEAIETSKLLALKEGLLVGISSGXXXXXXIRVAKRPENA 191
+ ++++ +EA+E K L L EG++ + S +++ + +
Sbjct: 309 VGPQHAYLNSTGRADYVSITDDEALEAFKTLCLHEGIIPALESSHALAHALKMMRENPDK 368
Query: 192 GKLIVVIFPSAGERYLST 209
+L+VV G++ + T
Sbjct: 369 EQLLVVNLSGRGDKDIFT 386
>pdb|3ZYQ|A Chain A, Crystal Structure Of The Tandem Vhs And Fyve Domains Of
Hepatocyte Growth Factor-Regulated Tyrosine Kinase
Substrate (Hgs-Hrs) At 1.48 A Resolution
pdb|4AVX|A Chain A, Hepatocyte Growth Factor-Regulated Tyrosine Kinase
Substrate (Hgs-Hrs) Bound To An Ip2 Compound At 1.68 A
Resolution
Length = 226
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 97 LKEKNPNIKVYGIEPSESAVLNGGQ 121
+ +KNP++ +Y +E ES V N GQ
Sbjct: 54 VNDKNPHVALYALEVMESVVKNCGQ 78
>pdb|1A50|B Chain B, Crystal Structure Of Wild-Type Tryptophan Synthase
Complexed With 5- Fluoroindole Propanol Phosphate
pdb|2WSY|B Chain B, Crystal Structure Of Wild-Type Tryptophan Synthase
pdb|2CLE|B Chain B, Tryptophan Synthase In Complex With N-(4'-
Trifluoromethoxybenzoyl)-2-Amino-1-Ethylphosphate (F6)-
Lowf6 Complex
pdb|2CLH|B Chain B, Tryptophan Synthase In Complex With (Naphthalene-2'-
Sulfonyl)-2-Amino-1-Ethylphosphate (F19)
pdb|2CLM|B Chain B, Tryptophan Synthase (External Aldimine State) In Complex
With N-(4'-Trifluoromethoxybenzoyl)-2-Amino-1-
Ethylphosphate (F6f)
pdb|2CLO|B Chain B, Tryptophan Synthase (External Aldimine State) In Complex
With (Naphthalene-2'-Sulfonyl)-2-Amino-1-Ethylphosphate
(F19)
pdb|2CLF|B Chain B, Tryptophan Synthase In Complex With N-(4'-
Trifluoromethoxybenzoyl)-2-Amino-1-Ethylphosphate (F6) -
Highf6 Complex
Length = 396
Score = 28.1 bits (61), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 28/140 (20%), Positives = 56/140 (40%), Gaps = 31/140 (22%)
Query: 101 NPNIKVYGIEPSESAVLNG--GQPGKHLIQGIGAGVIPPVLDVAM------------LD- 145
+ ++ + G+EP + G G P KH GI G+ P++ A LD
Sbjct: 246 DTSVGLIGVEPGGHGIETGEHGAPLKHGRVGIYFGMKAPMMQTADGQIEESYSISAGLDF 305
Query: 146 ----------------EVITVSSEEAIETSKLLALKEGLLVGISSGXXXXXXIRVAKRPE 189
+ ++++ +EA+E K L EG++ + S +++ +
Sbjct: 306 PSVGPQHAYLNSIGRADYVSITDDEALEAFKTLCRHEGIIPALESSHALAHALKMMREQP 365
Query: 190 NAGKLIVVIFPSAGERYLST 209
+L+VV G++ + T
Sbjct: 366 EKEQLLVVNLSGRGDKDIFT 385
>pdb|1FUY|B Chain B, Crystal Structure Of Betaa169lBETAC170W DOUBLE MUTANT OF
TRYPTOPHAN Synthase Complexed With
5-Fluoro-Indole-Propanol Phosphate
Length = 396
Score = 28.1 bits (61), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 28/140 (20%), Positives = 56/140 (40%), Gaps = 31/140 (22%)
Query: 101 NPNIKVYGIEPSESAVLNG--GQPGKHLIQGIGAGVIPPVLDVAM------------LD- 145
+ ++ + G+EP + G G P KH GI G+ P++ A LD
Sbjct: 246 DTSVGLIGVEPGGHGIETGEHGAPLKHGRVGIYFGMKAPMMQTADGQIEESYSISAGLDF 305
Query: 146 ----------------EVITVSSEEAIETSKLLALKEGLLVGISSGXXXXXXIRVAKRPE 189
+ ++++ +EA+E K L EG++ + S +++ +
Sbjct: 306 PSVGPQHAYLNSIGRADYVSITDDEALEAFKTLCRHEGIIPALESSHALAHALKMMREQP 365
Query: 190 NAGKLIVVIFPSAGERYLST 209
+L+VV G++ + T
Sbjct: 366 EKEQLLVVNLSGRGDKDIFT 385
>pdb|1QOP|B Chain B, Crystal Structure Of Wild-type Tryptophan Synthase
Complexed With Indole Propanol Phosphate
pdb|1K3U|B Chain B, Crystal Structure Of Wild-Type Tryptophan Synthase
Complexed With N- [1h-Indol-3-Yl-Acetyl]aspartic Acid
pdb|1K7E|B Chain B, Crystal Structure Of Wild-Type Tryptophan Synthase
Complexed With N- [1h-Indol-3-Yl-Acetyl]glycine Acid
pdb|1K7F|B Chain B, Crystal Structure Of Wild-Type Tryptophan Synthase
Complexed With N- [1h-Indol-3-Yl-Acetyl]valine Acid
pdb|1KFB|B Chain B, Crystal Structure Of Alphat183v Mutant Of Tryptophan
Synthase From Salmonella Typhimurium With Indole
Glycerol Phosphate
pdb|1TJP|B Chain B, Crystal Structure Of Wild-Type Tryptophan Synthase
Complexed With 1-
[(2-Hydroxylphenyl)amino]3-Glycerolphosphate
pdb|1WBJ|B Chain B, Wildtype Tryptophan Synthase Complexed With Glycerol
Phosphate
pdb|2CLI|B Chain B, Tryptophan Synthase In Complex With N-(4'-
Trifluoromethoxybenzenesulfonyl)-2-Amino-1-
Ethylphosphate (F9)
pdb|2CLK|B Chain B, Tryptophan Synthase In Complex With D-Glyceraldehyde 3-
Phosphate (G3p)
pdb|2CLL|B Chain B, Tryptophan Synthase (External Aldimine State) In Complex
With N-(4'-Trifluoromethoxybenzenesulfonyl)-2-Amino-1-
Ethylphosphate (F9)
pdb|2J9X|B Chain B, Tryptophan Synthase In Complex With Gp,
Alpha-D,L-Glycerol- Phosphate, Cs, Ph6.5 - Alpha
Aminoacrylate Form - (Gp)e(A- A)
pdb|3CEP|B Chain B, Structure Of A Tryptophan Synthase Quinonoid Intermediate
Length = 396
Score = 28.1 bits (61), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 28/140 (20%), Positives = 56/140 (40%), Gaps = 31/140 (22%)
Query: 101 NPNIKVYGIEPSESAVLNG--GQPGKHLIQGIGAGVIPPVLDVAM------------LD- 145
+ ++ + G+EP + G G P KH GI G+ P++ A LD
Sbjct: 246 DTSVGLIGVEPGGHGIETGEHGAPLKHGRVGIYFGMKAPMMQTADGQIEESYSISAGLDF 305
Query: 146 ----------------EVITVSSEEAIETSKLLALKEGLLVGISSGXXXXXXIRVAKRPE 189
+ ++++ +EA+E K L EG++ + S +++ +
Sbjct: 306 PSVGPQHAYLNSIGRADYVSITDDEALEAFKTLCRHEGIIPALESSHALAHALKMMREQP 365
Query: 190 NAGKLIVVIFPSAGERYLST 209
+L+VV G++ + T
Sbjct: 366 EKEQLLVVNLSGRGDKDIFT 385
>pdb|1K7X|B Chain B, Crystal Structure Of The Beta-Ser178pro Mutant Of
Tryptophan Synthase
pdb|1K8Y|B Chain B, Crystal Structure Of The Tryptophan Synthase
Beta-Ser178pro Mutant Complexed With
D,L-Alpha-Glycerol-3-Phosphate
pdb|1K8Z|B Chain B, Crystal Structure Of The Tryptophan Synthase
Beta-Ser178pro Mutant Complexed With
N-[1h-Indol-3-Yl-Acetyl]glycine Acid
Length = 396
Score = 28.1 bits (61), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 13/64 (20%), Positives = 32/64 (50%)
Query: 146 EVITVSSEEAIETSKLLALKEGLLVGISSGXXXXXXIRVAKRPENAGKLIVVIFPSAGER 205
+ ++++ +EA+E K L EG++ + S +++ + +L+VV G++
Sbjct: 322 DYVSITDDEALEAFKTLCRHEGIIPALESSHALAHALKMMREQPEKEQLLVVNLSGRGDK 381
Query: 206 YLST 209
+ T
Sbjct: 382 DIFT 385
>pdb|1TTP|B Chain B, Tryptophan Synthase (E.C.4.2.1.20) In The Presence Of
Cesium, Room Temperature
pdb|1TTQ|B Chain B, Tryptophan Synthase (E.C.4.2.1.20) In The Presence Of
Potassium At Room Temperature
pdb|1A5S|B Chain B, Crystal Structure Of Wild-Type Tryptophan Synthase
Complexed With 5- Fluoroindole Propanol Phosphate And
L-Ser Bound As Amino Acrylate To The Beta Site
pdb|1BKS|B Chain B, Tryptophan Synthase (E.C.4.2.1.20) From Salmonella
Typhimurium
pdb|1C9D|B Chain B, Crystal Structure Of The Complex Of Bacterial Tryptophan
Synthase With The Transition State Analogue Inhibitor
4-(2-Hydroxy-4- Fluorophenylthio)-Butylphosphonic Acid
pdb|1CW2|B Chain B, Crystal Structure Of The Complex Of Bacterial Tryptophan
Synthase With The Transition State Analogue Inhibitor
4-(2-Hydroxyphenylsulfinyl)- Butylphosphonic Acid
pdb|1CX9|B Chain B, Crystal Structure Of The Complex Of Bacterial Tryptophan
Synthase With The Transition State Analogue Inhibitor
4-(2-Aminophenylthio)- Butylphosphonic Acid
pdb|1C29|B Chain B, Crystal Structure Of The Complex Of Bacterial Tryptophan
Synthase With The Transition State Analogue Inhibitor
4-(2-Hydroxyphenylthio)-1- Butenylphosphonic Acid
pdb|1C8V|B Chain B, Crystal Structure Of The Complex Of Bacterial Tryptophan
Synthase With The Transition State Analogue Inhibitor
4-(2-Hydroxyphenylthio)- Butylphosphonic Acid
Length = 397
Score = 28.1 bits (61), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 28/140 (20%), Positives = 56/140 (40%), Gaps = 31/140 (22%)
Query: 101 NPNIKVYGIEPSESAVLNG--GQPGKHLIQGIGAGVIPPVLDVAM------------LD- 145
+ ++ + G+EP + G G P KH GI G+ P++ A LD
Sbjct: 247 DTSVGLIGVEPGGHGIETGEHGAPLKHGRVGIYFGMKAPMMQTADGQIEESYSISAGLDF 306
Query: 146 ----------------EVITVSSEEAIETSKLLALKEGLLVGISSGXXXXXXIRVAKRPE 189
+ ++++ +EA+E K L EG++ + S +++ +
Sbjct: 307 PSVGPQHAYLNSIGRADYVSITDDEALEAFKTLCRHEGIIPALESSHALAHALKMMREQP 366
Query: 190 NAGKLIVVIFPSAGERYLST 209
+L+VV G++ + T
Sbjct: 367 EKEQLLVVNLSGRGDKDIFT 386
>pdb|1K8X|B Chain B, Crystal Structure Of Alphat183v Mutant Of Tryptophan
Synthase From Salmonella Typhimurium
pdb|1KFC|B Chain B, Crystal Structure Of Alphat183v Mutant Of Tryptophan
Synthase From Salmonella Typhimurium With Indole
Propanol Phosphate
pdb|1KFJ|B Chain B, Crystal Structure Of Wild-Type Tryptophan Synthase
Complexed With L-Serine
pdb|1KFK|B Chain B, Crystal Structure Of Tryptophan Synthase From Salmonella
Typhimurium
pdb|2RH9|B Chain B, Tryptophan Synthase Complexed With Igp, Internal Aldimine,
Ph 9.0
pdb|2RHG|B Chain B, Tryptophan Synthase Complexed With Igp, Ph 7.0, Internal
Aldimine
Length = 397
Score = 28.1 bits (61), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 28/140 (20%), Positives = 56/140 (40%), Gaps = 31/140 (22%)
Query: 101 NPNIKVYGIEPSESAVLNG--GQPGKHLIQGIGAGVIPPVLDVAM------------LD- 145
+ ++ + G+EP + G G P KH GI G+ P++ A LD
Sbjct: 247 DTSVGLIGVEPGGHGIETGEHGAPLKHGRVGIYFGMKAPMMQTADGQIEESYSISAGLDF 306
Query: 146 ----------------EVITVSSEEAIETSKLLALKEGLLVGISSGXXXXXXIRVAKRPE 189
+ ++++ +EA+E K L EG++ + S +++ +
Sbjct: 307 PSVGPQHAYLNSIGRADYVSITDDEALEAFKTLCRHEGIIPALESSHALAHALKMMREQP 366
Query: 190 NAGKLIVVIFPSAGERYLST 209
+L+VV G++ + T
Sbjct: 367 EKEQLLVVNLSGRGDKDIFT 386
>pdb|3PR2|B Chain B, Tryptophan Synthase Indoline Quinonoid Structure With F9
Inhibitor In Alpha Site
Length = 391
Score = 28.1 bits (61), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 28/140 (20%), Positives = 56/140 (40%), Gaps = 31/140 (22%)
Query: 101 NPNIKVYGIEPSESAVLNG--GQPGKHLIQGIGAGVIPPVLDVAM------------LD- 145
+ ++ + G+EP + G G P KH GI G+ P++ A LD
Sbjct: 245 DTSVGLIGVEPGGHGIETGEHGAPLKHGRVGIYFGMKAPMMQTADGQIEESYSISAGLDF 304
Query: 146 ----------------EVITVSSEEAIETSKLLALKEGLLVGISSGXXXXXXIRVAKRPE 189
+ ++++ +EA+E K L EG++ + S +++ +
Sbjct: 305 PSVGPQHAYLNSIGRADYVSITDDEALEAFKTLCRHEGIIPALESSHALAHALKMMREQP 364
Query: 190 NAGKLIVVIFPSAGERYLST 209
+L+VV G++ + T
Sbjct: 365 EKEQLLVVNLSGRGDKDIFT 384
>pdb|2J9Z|B Chain B, Tryptophan Synthase T110 Mutant Complex
Length = 397
Score = 28.1 bits (61), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 13/64 (20%), Positives = 32/64 (50%)
Query: 146 EVITVSSEEAIETSKLLALKEGLLVGISSGXXXXXXIRVAKRPENAGKLIVVIFPSAGER 205
+ ++++ +EA+E K L EG++ + S +++ + +L+VV G++
Sbjct: 323 DYVSITDDEALEAFKTLCRHEGIIPALESSHALAHALKMMREQPEKEQLLVVNLSGRGDK 382
Query: 206 YLST 209
+ T
Sbjct: 383 DIFT 386
>pdb|2J9Y|B Chain B, Tryptophan Synthase Q114n Mutant In Complex With Compound
Ii
Length = 397
Score = 28.1 bits (61), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 13/64 (20%), Positives = 32/64 (50%)
Query: 146 EVITVSSEEAIETSKLLALKEGLLVGISSGXXXXXXIRVAKRPENAGKLIVVIFPSAGER 205
+ ++++ +EA+E K L EG++ + S +++ + +L+VV G++
Sbjct: 323 DYVSITDDEALEAFKTLCRHEGIIPALESSHALAHALKMMREQPEKEQLLVVNLSGRGDK 382
Query: 206 YLST 209
+ T
Sbjct: 383 DIFT 386
>pdb|1QOQ|B Chain B, Crystal Structure Of Wild-type Tryptophan Synthase
Complexed With Indole Glycerol Phosphate
Length = 396
Score = 28.1 bits (61), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 13/64 (20%), Positives = 32/64 (50%)
Query: 146 EVITVSSEEAIETSKLLALKEGLLVGISSGXXXXXXIRVAKRPENAGKLIVVIFPSAGER 205
+ ++++ +EA+E K L EG++ + S +++ + +L+VV G++
Sbjct: 322 DYVSITDDEALEAFKTLCRHEGIIPALESSHALAHALKMMREQPEKEQLLVVNLSGRGDK 381
Query: 206 YLST 209
+ T
Sbjct: 382 DIFT 385
>pdb|2TYS|B Chain B, Crystal Structures Of Mutant (Betak87t) Tryptophan
Synthase Alpha2 Beta2 Complex With Ligands Bound To The
Active Sites Of The Alpha And Beta Subunits Reveal
Ligand-Induced Conformational Changes
Length = 397
Score = 28.1 bits (61), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 13/64 (20%), Positives = 32/64 (50%)
Query: 146 EVITVSSEEAIETSKLLALKEGLLVGISSGXXXXXXIRVAKRPENAGKLIVVIFPSAGER 205
+ ++++ +EA+E K L EG++ + S +++ + +L+VV G++
Sbjct: 323 DYVSITDDEALEAFKTLCRHEGIIPALESSHALAHALKMMREQPEKEQLLVVNLSGRGDK 382
Query: 206 YLST 209
+ T
Sbjct: 383 DIFT 386
>pdb|1UBS|B Chain B, Tryptophan Synthase (E.C.4.2.1.20) With A Mutation Of Lys
87->thr In The B Subunit And In The Presence Of Ligand
L-Serine
pdb|2TRS|B Chain B, Crystal Structures Of Mutant (betak87t) Tryptophan
Synthase Alpha2 Beta2 Complex With Ligands Bound To The
Active Sites Of The Alpha And Beta Subunits Reveal
Ligand-induced Conformational Changes
pdb|2TSY|B Chain B, Crystal Structures Of Mutant (Betak87t) Tryptophan
Synthase Alpha2 Beta2 Complex With Ligands Bound To The
Active Sites Of The Alpha And Beta Subunits Reveal
Ligand-Induced Conformational Changes
Length = 397
Score = 28.1 bits (61), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 28/140 (20%), Positives = 56/140 (40%), Gaps = 31/140 (22%)
Query: 101 NPNIKVYGIEPSESAVLNG--GQPGKHLIQGIGAGVIPPVLDVAM------------LD- 145
+ ++ + G+EP + G G P KH GI G+ P++ A LD
Sbjct: 247 DTSVGLIGVEPGGHGIETGEHGAPLKHGRVGIYFGMKAPMMQTADGQIEESYSISAGLDF 306
Query: 146 ----------------EVITVSSEEAIETSKLLALKEGLLVGISSGXXXXXXIRVAKRPE 189
+ ++++ +EA+E K L EG++ + S +++ +
Sbjct: 307 PSVGPQHAYLNSIGRADYVSITDDEALEAFKTLCRHEGIIPALESSHALAHALKMMREQP 366
Query: 190 NAGKLIVVIFPSAGERYLST 209
+L+VV G++ + T
Sbjct: 367 EKEQLLVVNLSGRGDKDIFT 386
>pdb|1A5A|B Chain B, Cryo-Crystallography Of A True Substrate,
Indole-3-Glycerol Phosphate, Bound To A Mutant
(Alphad60n) Tryptophan Synthase Alpha2beta2 Complex
Reveals The Correct Orientation Of Active Site Alpha Glu
49
pdb|1A5B|B Chain B, Cryo-Crystallography Of A True Substrate,
Indole-3-Glycerol Phosphate, Bound To A Mutant (Alpha
D60n) Tryptophan Synthase Alpha2beta2 Complex Reveals
The Correct Orientation Of Active Site Alpha Glu 49
pdb|1BEU|B Chain B, Trp Synthase (D60n-Ipp-Ser) With K+
Length = 397
Score = 27.7 bits (60), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 13/64 (20%), Positives = 32/64 (50%)
Query: 146 EVITVSSEEAIETSKLLALKEGLLVGISSGXXXXXXIRVAKRPENAGKLIVVIFPSAGER 205
+ ++++ +EA+E K L EG++ + S +++ + +L+VV G++
Sbjct: 323 DYVSITDDEALEAFKTLCRHEGIIPALESSHALAHALKMMREQPEKEQLLVVNLSGRGDK 382
Query: 206 YLST 209
+ T
Sbjct: 383 DIFT 386
>pdb|1KFE|B Chain B, Crystal Structure Of Alphat183v Mutant Of Tryptophan
Synthase From Salmonella Typhimurium With L-ser Bound To
The Beta Site
Length = 394
Score = 27.7 bits (60), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 13/64 (20%), Positives = 32/64 (50%)
Query: 146 EVITVSSEEAIETSKLLALKEGLLVGISSGXXXXXXIRVAKRPENAGKLIVVIFPSAGER 205
+ ++++ +EA+E K L EG++ + S +++ + +L+VV G++
Sbjct: 322 DYVSITDDEALEAFKTLCRHEGIIPALESSHALAHALKMMREQPEKEQLLVVNLSGRGDK 381
Query: 206 YLST 209
+ T
Sbjct: 382 DIFT 385
>pdb|1X1Q|A Chain A, Crystal Structure Of Tryptophan Synthase Beta Chain From
Thermus Thermophilus Hb8
pdb|1X1Q|B Chain B, Crystal Structure Of Tryptophan Synthase Beta Chain From
Thermus Thermophilus Hb8
Length = 418
Score = 27.7 bits (60), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 142 AMLDEVITVSSEEAIETSKLLALKEGLLVGISSGXXXXXXIRVAKRPENAGKLIVVI 198
A + E +V+ EEA+E KLLA EG++ + S +V PE +VVI
Sbjct: 343 AGVAEYASVTDEEALEGFKLLARLEGIIPALESAHAIAYAAKVV--PEXDKDQVVVI 397
>pdb|1WDW|B Chain B, Structural Basis Of Mutual Activation Of The Tryptophan
Synthase A2b2 Complex From A Hyperthermophile,
Pyrococcus Furiosus
pdb|1WDW|D Chain D, Structural Basis Of Mutual Activation Of The Tryptophan
Synthase A2b2 Complex From A Hyperthermophile,
Pyrococcus Furiosus
pdb|1WDW|F Chain F, Structural Basis Of Mutual Activation Of The Tryptophan
Synthase A2b2 Complex From A Hyperthermophile,
Pyrococcus Furiosus
pdb|1WDW|H Chain H, Structural Basis Of Mutual Activation Of The Tryptophan
Synthase A2b2 Complex From A Hyperthermophile,
Pyrococcus Furiosus
pdb|1WDW|J Chain J, Structural Basis Of Mutual Activation Of The Tryptophan
Synthase A2b2 Complex From A Hyperthermophile,
Pyrococcus Furiosus
pdb|1WDW|L Chain L, Structural Basis Of Mutual Activation Of The Tryptophan
Synthase A2b2 Complex From A Hyperthermophile,
Pyrococcus Furiosus
Length = 385
Score = 27.3 bits (59), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 146 EVITVSSEEAIETSKLLALKEGLLVGISSGXXXXXXIRVAKRPENAGKLIVVIFPSAGER 205
E +TV+ EEA++ L+ EG++ + S +++AK ++I+V G++
Sbjct: 318 EYVTVTDEEALKAFHELSRTEGIIPALESAHAVAYAMKLAKEMSR-DEIIIVNLSGRGDK 376
Query: 206 YLSTAL 211
L L
Sbjct: 377 DLDIVL 382
>pdb|1V8Z|A Chain A, X-Ray Crystal Structure Of The Tryptophan Synthase B2
Subunit From Hyperthermophile, Pyrococcus Furiosus
pdb|1V8Z|B Chain B, X-Ray Crystal Structure Of The Tryptophan Synthase B2
Subunit From Hyperthermophile, Pyrococcus Furiosus
pdb|1V8Z|C Chain C, X-Ray Crystal Structure Of The Tryptophan Synthase B2
Subunit From Hyperthermophile, Pyrococcus Furiosus
pdb|1V8Z|D Chain D, X-Ray Crystal Structure Of The Tryptophan Synthase B2
Subunit From Hyperthermophile, Pyrococcus Furiosus
Length = 388
Score = 27.3 bits (59), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 146 EVITVSSEEAIETSKLLALKEGLLVGISSGXXXXXXIRVAKRPENAGKLIVVIFPSAGER 205
E +TV+ EEA++ L+ EG++ + S +++AK ++I+V G++
Sbjct: 318 EYVTVTDEEALKAFHELSRTEGIIPALESAHAVAYAMKLAKEMSR-DEIIIVNLSGRGDK 376
Query: 206 YLSTAL 211
L L
Sbjct: 377 DLDIVL 382
>pdb|3HMK|A Chain A, Crystal Structure Of Serine Racemase
pdb|3HMK|B Chain B, Crystal Structure Of Serine Racemase
pdb|3L6C|A Chain A, X-Ray Crystal Structure Of Rat Serine Racemase In Complex
Wi Malonate A Potent Inhibitor
pdb|3L6C|B Chain B, X-Ray Crystal Structure Of Rat Serine Racemase In Complex
Wi Malonate A Potent Inhibitor
Length = 339
Score = 26.9 bits (58), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 16/93 (17%)
Query: 97 LKEKNPNIKVYGIEPS------ESAVLNGGQPGKH--------LIQGIGAGVIPPVLDVA 142
+K P++KVY EPS +S + P H + IG P + D
Sbjct: 197 IKTLKPSVKVYAAEPSNADDCYQSKLKGELTPNLHPPETIADGVKSSIGLNTWPIIRD-- 254
Query: 143 MLDEVITVSSEEAIETSKLLALKEGLLVGISSG 175
++D+V TV+ +E ++L+ + LL+ ++G
Sbjct: 255 LVDDVFTVTEDEIKYATQLVWERMKLLIEPTAG 287
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.315 0.138 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,406,193
Number of Sequences: 62578
Number of extensions: 249152
Number of successful extensions: 490
Number of sequences better than 100.0: 60
Number of HSP's better than 100.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 396
Number of HSP's gapped (non-prelim): 60
length of query: 225
length of database: 14,973,337
effective HSP length: 95
effective length of query: 130
effective length of database: 9,028,427
effective search space: 1173695510
effective search space used: 1173695510
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 50 (23.9 bits)